Import packages
import numpy as np
import pandas as pd
import matplotlib.pyplot as plt
from math import sqrt
from enum import Enum
from sklearn import ensemble
from sklearn import linear_model
from scipy.stats import pearsonr
from scipy.stats import spearmanr
from sklearn.metrics import r2_score
from sklearn.dummy import DummyRegressor
from sklearn.model_selection import KFold
from sklearn.metrics import mean_squared_error
from sklearn.ensemble import RandomForestRegressor
Common Fields
protein_profiles = "Preprocessed_Data/protein_expression.csv"
mRNA_DNA_minmax = "Preprocessed_Data/mRNA_DNA_minmax.csv"
mRNA_DNA_TMM = "Preprocessed_Data/mRNA_DNA_TMM.csv"
mRNA_DNA_zscores = "Preprocessed_Data/mRNA_DNA_zscores.csv"
mRNA_DNA_unnormalized = "Preprocessed_Data/mRNA_DNA_unnormalized.csv"
mRNA_All_minmax = "Preprocessed_Data/mRNA_All_minmax.csv"
mRNA_All_zscores = "Preprocessed_Data/mRNA_All_zscores.csv"
mRNA_All_TMM = "Preprocessed_Data/mRNA_All_TMM.csv"
mRNA_All_unnormalized = "Preprocessed_Data/mRNA_All_unnormalized.csv"
protein_interactions = "Preprocessed_Data/ProteinInteractionPartners.csv"
gene_mutations = "Preprocessed_Data/Gene_Mutations.csv"
results = "Results/All_Results.csv"
predictors = {}
cumulative_scores = {}
random_genes = {}
Common Enums:
Predictor_Type = Enum('Predictor_Type', 'Zero Mean LinearRegression ElasticNet RandomForests')
Proteins = Enum('Proteins',
'RB1 CDH1 CDH2 CDH3 PTEN BRCA2 CDKN2A TP53 CTNNB1 CCNE1 CCND1 ERBB2 ERBB3')
NormalizeTechnique = Enum('NormalizeTechnique', 'ZScore MinMax TMM UN')
Metric = Enum('Metric', 'Pearson Spearman R2 RMSE NRMSE MAPE')
class Scenario(Enum):
selfmRNA = 1
AllmRNA_Mutations = 2
selfmRNA_Mutations = 3
selfmRNA_Polynomial = 4
selfmRNA_CNA_Mutations = 5
NRandomGenes_Mutations = 6
NMostVariableGenes_Mutations = 7
AllInteractionPartners_Mutations = 8
Top100InteractionPartners_Mutations = 9
ThousandMostVariableGenes_Mutations = 10
Common Methods
#Computing Mean Absolute Percentage Error (MAPE)
def mean_absolute_percentage_error(y_true, y_pred):
return np.mean(np.abs((y_true - y_pred) / y_true)) * 100
#Computing Root Mean Squared Percentage Error
def root_mean_squared_percentage_error(y_true, y_pred):
return np.sqrt(np.mean(np.square(((y_true - y_pred) / y_true))))
def update_scores(annotation, scorekeeper, pearson, spearman,
coeff_determination, RMSE, NRMSE, MAPE):
protein_predictType_Pearson = ":".join([annotation, Metric.Pearson.name])
protein_predictType_Spearman = ":".join([annotation, Metric.Spearman.name])
protein_predictType_r2 = ":".join([annotation, Metric.R2.name])
protein_predictType_rmse = ":".join([annotation, Metric.RMSE.name])
protein_predictType_nrmse = ":".join([annotation, Metric.NRMSE.name])
protein_predictType_mape = ":".join([annotation, Metric.MAPE.name])
if(protein_predictType_Pearson in scorekeeper):
pear_corr = scorekeeper[protein_predictType_Pearson] + pearson
scorekeeper[protein_predictType_Pearson] = pear_corr
else:
scorekeeper[protein_predictType_Pearson] = pearson
if(protein_predictType_Spearman in scorekeeper):
spear_corr = scorekeeper[protein_predictType_Spearman] + spearman
scorekeeper[protein_predictType_Spearman] = spear_corr
else:
scorekeeper[protein_predictType_Spearman] = spearman
if(protein_predictType_r2 in scorekeeper):
cDet = scorekeeper[protein_predictType_r2] + coeff_determination
scorekeeper[protein_predictType_r2] = cDet
else:
scorekeeper[protein_predictType_r2] = coeff_determination
if(protein_predictType_rmse in scorekeeper):
rmse = scorekeeper[protein_predictType_rmse] + RMSE
scorekeeper[protein_predictType_rmse] = rmse
else:
scorekeeper[protein_predictType_rmse] = RMSE
if(protein_predictType_nrmse in scorekeeper):
nrmse = scorekeeper[protein_predictType_nrmse] + NRMSE
scorekeeper[protein_predictType_nrmse] = nrmse
else:
scorekeeper[protein_predictType_nrmse] = NRMSE
if(protein_predictType_mape in scorekeeper):
mape = scorekeeper[protein_predictType_mape] + MAPE
scorekeeper[protein_predictType_mape] = mape
else:
scorekeeper[protein_predictType_mape] = MAPE
#Evaluating the predictions using different metrics
def evaluate_predictions(y_true,y_predictions):
pearson = np.nan
rho = np.nan
if not (y_predictions == y_predictions[0]).all():
#Compute Pearson Correlation
pearson, p_value = pearsonr(y_true, y_predictions)
#Compute Spearman Correlation
rho, p_value = spearmanr(y_true, y_predictions)
print("\t\tPearson Correlation: ", pearson)
print("\t\tSpearman Correlation: ", rho)
#Compute the coefficient of determination
coeff_determination = r2_score(y_true, y_predictions)
print("\t\tCoefficient of Determination: ", coeff_determination)
#Compute Root Mean Squared Error (RMSE)
rmse = sqrt(mean_squared_error(y_true, y_predictions))
print("\t\tRMSE: ", rmse)
#Compute Normalized RMSE
nrmse = rmse/(np.max(y_true) - np.min(y_true))
print("\t\tNRMSE: ", nrmse)
#Compute Mean Absolute Percentage Error
mape = mean_absolute_percentage_error(y_true, y_predictions)
print("\t\tMAPE: ", mape)
return pearson, rho, coeff_determination, rmse, nrmse, mape
def predict_and_evaluate(estimator, x, y, scorekeeper, annotation):
predictions = estimator.predict(x)
pcor, scor, cdet, rmse, nrmse, mape = evaluate_predictions(np.ravel(y.values),
predictions)
update_scores(annotation, scorekeeper, pcor, scor, cdet, rmse, nrmse, mape)
#Get or create the predictor based on the type specified
def get_create_predictor(predictor_type):
if(predictor_type in predictors):
predictor = predictors[predictor_type]
else:
if(predictor_type == Predictor_Type.Zero):
predictor = DummyRegressor(strategy='constant', constant=0)
elif(predictor_type == Predictor_Type.Mean):
predictor = DummyRegressor(strategy='mean')
elif(predictor_type == Predictor_Type.LinearRegression):
predictor = linear_model.LinearRegression()
elif(predictor_type == Predictor_Type.ElasticNet):
predictor = linear_model.ElasticNet(alpha=0.1, l1_ratio=0.1, random_state=0)
else:
predictor = RandomForestRegressor(max_depth=2, random_state=0, n_estimators=100)
predictors[predictor_type] = predictor
return predictor
def get_protein_partners(protein, dataframe=None, n_highest=None):
protein_partners = pd.read_csv(protein_interactions, index_col=0)
protein_partners = protein_partners.loc[protein_partners['preferredName_A'] == protein]
if(n_highest is not None):
protein_partners = protein_partners.sort_values("score", ascending=False).head(n_highest)
interaction_partners = protein_partners['preferredName_B'].tolist()
if(dataframe is None):
return interaction_partners
else:
print("Protein Interaction Partners Count: ", len(interaction_partners))
protein_columns = [col for col in dataframe.columns if col in interaction_partners]
return protein_columns
def get_most_variable_mRNAs(dataframe, n=1000):
standard_dev = dataframe.std()
standard_dev = standard_dev.sort_values(ascending=False)
higheststd = standard_dev.nlargest(n, keep='all')
return higheststd.index.values.tolist()
def get_polynomial_features(X_train, X_test, degree=2):
x_train = X_train
x_test = X_test
for index in range(2, degree+1):
power = str(index)
root = "1/" + power
if(x_train is not None):
x_train[power] = pd.Series()
x_train[root] = pd.Series()
if(x_test is not None):
x_test[power] = pd.Series()
x_test[root] = pd.Series()
x_train[power] = X_train.abs()**(index) * np.sign(X_train)
x_test[power] = X_test.abs()**(index) * np.sign(X_test)
x_train[power] = X_train.abs()**(index) * np.sign(X_train)
x_test[power] = X_test.abs()**(index) * np.sign(X_test)
x_train[root] = X_train.abs()**(1/(index)) * np.sign(X_train)
x_test[root] = X_test.abs()**(1/(index)) * np.sign(X_test)
x_train.dropna(how='any', axis=0, inplace=True)
x_test.dropna(how='any', axis=0, inplace=True)
return x_train, x_test
def get_random_genes(protein, dataframe, n = 1000):
if(protein in random_genes):
return random_genes[protein]
else:
col_names = dataframe.sample(n, axis = 1).columns.tolist()
random_genes[protein] = col_names
return col_names
def get_sorted_protein_data(Y_train, Y_test, x_train, x_test):
y_train = Y_train[Y_train.index.isin(x_train.index)]
y_test = Y_test[Y_test.index.isin(x_test.index)]
x_train.sort_index(inplace=True)
x_test.sort_index(inplace=True)
y_train.sort_index(inplace=True)
y_test.sort_index(inplace=True)
return y_train, y_test
def get_train_test_data(protein, scenario, X_train, X_test, Y_train, Y_test, Z_train, Z_test):
protein_columns = None
if(scenario == Scenario.ThousandMostVariableGenes_Mutations):
combined_data = [X_train, X_test]
protein_columns = get_most_variable_mRNAs(pd.concat(combined_data))
elif(scenario == Scenario.AllInteractionPartners_Mutations):
protein_columns = get_protein_partners(protein, X_train)
elif(scenario == Scenario.Top100InteractionPartners_Mutations ):
protein_columns = get_protein_partners(protein, X_train, n_highest=100)
elif(scenario == Scenario.NRandomGenes_Mutations ):
columns_count = len(get_protein_partners(protein))
protein_columns = get_random_genes(protein, X_test, columns_count)
elif(scenario == Scenario.NMostVariableGenes_Mutations ):
columns_count = len(get_protein_partners(protein))
combined_data = [X_train, X_test]
protein_columns = get_most_variable_mRNAs(pd.concat(combined_data), columns_count)
elif(scenario == Scenario.AllmRNA_Mutations ):
x_train = X_train.copy()
x_test = X_test.copy()
elif(scenario == Scenario.selfmRNA_Polynomial):
x_train = X_train[[protein]].copy()
x_test = X_test[[protein]].copy()
x_train, x_test = get_polynomial_features(x_train, x_test, degree=3)
elif(scenario == Scenario.selfmRNA_CNA_Mutations):
protein_columns = [col for col in X_train.columns if protein in col]
else:
x_train = X_train[[protein]].copy()
x_test = X_test[[protein]].copy()
if(protein_columns is not None):
x_train = X_train[protein_columns].copy()
x_test = X_test[protein_columns].copy()
if(scenario != Scenario.selfmRNA and scenario != Scenario.selfmRNA_Polynomial):
if(scenario != Scenario.selfmRNA_Mutations and scenario != Scenario.selfmRNA_CNA_Mutations):
x_train[protein] = X_train[protein]
x_test[protein] = X_test[protein]
x_train["GeneMutation"] = Z_train[protein]
x_test["GeneMutation"] = Z_test[protein]
print("x_train_column_count: ", len(x_train.columns))
if(scenario != Scenario.AllmRNA_Mutations):
print("x_train columns: ", x_train.columns.tolist())
y_train, y_test = get_sorted_protein_data(Y_train[protein], Y_test[protein], x_train, x_test)
return x_train, x_test, y_train, y_test
def get_annotation(protein, predictor, scenario, normalize_technique, train_test):
return ":".join([protein.name, predictor.name, scenario.name,
normalize_technique.name, train_test])
def get_data(normalize_technique):
if(normalize_technique == NormalizeTechnique.ZScore):
input_features = pd.read_csv(mRNA_All_zscores, index_col=0)
elif(normalize_technique == NormalizeTechnique.MinMax):
input_features = pd.read_csv(mRNA_All_minmax, index_col=0)
elif(normalize_technique == NormalizeTechnique.TMM):
input_features = pd.read_csv(mRNA_All_TMM, index_col=0)
else:
input_features = pd.read_csv(mRNA_All_unnormalized, index_col=0)
#Loading the file containing protein profiles
expected_values = pd.read_csv(protein_profiles, index_col=0)
#Loading the file containing mutations data
mutations_data = pd.read_csv(gene_mutations, index_col=0)
#Returning the input features, expected values and the mutation data
return input_features, expected_values, mutations_data
def get_mRNA_DNA_data(normalize_technique):
if(normalize_technique == NormalizeTechnique.ZScore):
input_features = pd.read_csv(mRNA_DNA_zscores, index_col=0)
elif(normalize_technique == NormalizeTechnique.MinMax):
input_features = pd.read_csv(mRNA_DNA_minmax, index_col=0)
elif(normalize_technique == NormalizeTechnique.TMM):
input_features = pd.read_csv(mRNA_DNA_TMM, index_col=0)
else:
input_features = pd.read_csv(mRNA_DNA_unnormalized, index_col=0)
#Loading the file containing protein profiles
expected_values = pd.read_csv(protein_profiles, index_col=0)
#Loading the file containing mutations data
mutations_data = pd.read_csv(gene_mutations, index_col=0)
#Returning the input features, expected values and the mutation data
return input_features, expected_values, mutations_data
def perform_kFoldCV(k, scenario, normalize_technique, X, Y, Z = None):
Z_train = None
Z_test = None
kFold = KFold(n_splits=k)
fold = 1
for train_index, test_index in kFold.split(X, Y):
print("\n\nFold: ", fold)
X_train, X_test = X.iloc[train_index], X.iloc[test_index]
Y_train, Y_test = Y.iloc[train_index], Y.iloc[test_index]
Z_train, Z_test = Z.iloc[train_index], Z.iloc[test_index]
for protein in Proteins:
print("\nProtein: ", protein.name)
x_train, x_test, y_train, y_test = get_train_test_data(protein.name, scenario,
X_train, X_test,
Y_train, Y_test,
Z_train, Z_test)
for predictor_type in Predictor_Type:
print("\n\tPredictor: ", predictor_type.name)
predictor = get_create_predictor(predictor_type)
predictor.fit(x_train, np.ravel(y_train.values))
predict_and_evaluate(predictor, x_train, y_train, cumulative_scores,
get_annotation(protein, predictor_type, scenario,
normalize_technique, "Train"))
predict_and_evaluate(predictor, x_test, y_test, cumulative_scores,
get_annotation(protein, predictor_type, scenario,
normalize_technique, "Test"))
fold = fold + 1
def tabulate_scores(scorekeeper, num_folds):
#printing the mean values
proteins = [name for name in dir(Proteins) if not name.startswith('_')]
predictorTypes = [name for name in dir(Predictor_Type) if not name.startswith('_')]
scenarios = [name for name in dir(Scenario) if not name.startswith('_')]
normalizations = [name for name in dir(NormalizeTechnique) if not name.startswith('_')]
train_test = ['Train', 'Test']
indices = pd.MultiIndex.from_product([proteins, predictorTypes,
scenarios, normalizations, train_test],
names=['Protein', 'Regressor', 'Case',
'Normalization', 'Train/Test'])
column_names = [name for name in dir(Metric) if not name.startswith('_')]
dataFrame = pd.DataFrame('', indices, column_names)
for key, value in scorekeeper.items():
value = value/num_folds
parts = key.split(":")
dataFrame.loc[(parts[0], parts[1], parts[2], parts[3], parts[4]), parts[5]] = value
return dataFrame
def compute_improvements(dataframe, *metrics):
indices = dataframe.index.tolist()
selfmRNA = Scenario.selfmRNA.name
linearRegression = Predictor_Type.LinearRegression.name
for metric in metrics:
improvement = metric + " Improvement"
dataframe[improvement] = pd.Series()
for index in indices:
protein, regressor, case, norm, train_test = index
base = dataframe.loc[(protein, linearRegression , selfmRNA, norm, train_test), metric]
value = dataframe.loc[(protein, regressor, case, norm, train_test), metric]
if(base and value):
computed_improvement = value - base
dataframe.loc[(protein, regressor, case, norm, train_test),
improvement] = computed_improvement
return dataframe
Machine Learning Models with k-fold cross validation
num_folds = 5
self-mRNA
ZScore
scenario = Scenario.selfmRNA
normalizeTechnique = NormalizeTechnique.ZScore
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.648331 | 0.348611 | 0.770359 | -0.860535 | -0.0703 | -0.190586 | 0.719543 | 0.931178 | -0.283665 | -0.568745 | ... | 0.238689 | -0.239582 | -0.271725 | -0.222943 | -0.211122 | 0.792968 | -0.619672 | -0.946953 | -0.457066 | 0.454464 |
| TCGA-A1-A0SH-01 | -0.757220 | -0.562180 | -0.708360 | -0.860535 | -0.0703 | -0.190586 | -0.527186 | -0.611509 | -0.283665 | -0.568745 | ... | 0.739490 | -0.107967 | -1.200905 | -0.903627 | 1.252346 | 0.854083 | 0.108510 | -0.031025 | 0.991113 | -0.083768 |
| TCGA-A1-A0SJ-01 | -0.405237 | 0.254851 | -0.925065 | -0.223237 | -0.0703 | -0.190586 | -0.525012 | -0.390046 | -0.283665 | 1.475888 | ... | 0.592975 | 5.821247 | -1.079296 | -0.618408 | 0.444358 | -0.369825 | -0.573411 | -0.555512 | -0.488416 | -0.083768 |
| TCGA-A1-A0SK-01 | 3.940101 | 14.857648 | -0.228301 | -0.311392 | -0.0703 | -0.004913 | -0.697917 | -0.754652 | -0.283665 | -0.568745 | ... | 0.051750 | -0.027856 | 2.390553 | 0.357970 | 1.337526 | -1.597758 | 1.043918 | 0.590450 | -0.467061 | -0.083768 |
| TCGA-A1-A0SQ-01 | -1.114818 | -1.129592 | -0.842620 | -0.860535 | -0.0703 | -0.190586 | -0.507239 | -0.137487 | -0.283665 | -0.568745 | ... | 1.412610 | -0.008283 | -0.929428 | -0.853107 | 0.062384 | -0.434733 | -1.040418 | -0.606257 | -0.580936 | -0.083768 |
5 rows × 20133 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 1 x_train columns: ['RB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.19391279737668243 Spearman Correlation: 0.25847504910702246 Coefficient of Determination: 0.0376021729864503 RMSE: 0.21984820246432935 NRMSE: 0.08326006531502719 MAPE: 189.58061202587038 Pearson Correlation: 0.2796279815287011 Spearman Correlation: 0.34967808018729885 Coefficient of Determination: 0.021262301857832733 RMSE: 0.2774685518687956 NRMSE: 0.1370736289200316 MAPE: 131.61247132621608 Predictor: ElasticNet Pearson Correlation: 0.19391279737668238 Spearman Correlation: 0.25847504910702246 Coefficient of Determination: 0.03440862321528804 RMSE: 0.2202126643715294 NRMSE: 0.08339809292616147 MAPE: 168.19927789298896 Pearson Correlation: 0.2796279815287011 Spearman Correlation: 0.34967808018729885 Coefficient of Determination: 0.009490532346382974 RMSE: 0.27913219122970495 NRMSE: 0.13789549173251306 MAPE: 128.79234861797073 Predictor: RandomForests Pearson Correlation: 0.338356626817481 Spearman Correlation: 0.33951132296467335 Coefficient of Determination: 0.0980294642022066 RMSE: 0.2128343775533181 NRMSE: 0.08060381653221665 MAPE: 145.37698710976034 Pearson Correlation: 0.27053666597285697 Spearman Correlation: 0.3280678885109722 Coefficient of Determination: 0.025911503927463886 RMSE: 0.27680875151246914 NRMSE: 0.1367476776416065 MAPE: 107.54919913765022 Protein: CDH1 x_train_column_count: 1 x_train columns: ['CDH1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 0.5012433342985567 Spearman Correlation: 0.5636647709924965 Coefficient of Determination: 0.2512448801787346 RMSE: 0.9764389700758118 NRMSE: 0.164126698952114 MAPE: 691.9943003587869 Pearson Correlation: 0.5235921917169751 Spearman Correlation: 0.6555360452638768 Coefficient of Determination: 0.2657837208609377 RMSE: 0.9942240983612216 NRMSE: 0.16102881318409212 MAPE: 377.38299119942315 Predictor: ElasticNet Pearson Correlation: 0.5012433342985568 Spearman Correlation: 0.5636647709924965 Coefficient of Determination: 0.2483484318632485 RMSE: 0.9783257519418906 NRMSE: 0.16444384245909446 MAPE: 658.6467384244256 Pearson Correlation: 0.5235921917169751 Spearman Correlation: 0.6555360452638768 Coefficient of Determination: 0.2719795956415557 RMSE: 0.9900202015028465 NRMSE: 0.1603479319592573 MAPE: 361.77796841511736 Predictor: RandomForests Pearson Correlation: 0.7132134998444969 Spearman Correlation: 0.5781801023015845 Coefficient of Determination: 0.5084673634826771 RMSE: 0.7911364260120465 NRMSE: 0.13297974988856612 MAPE: 306.3488021625489 Pearson Correlation: 0.7364529516243186 Spearman Correlation: 0.6543510118962805 Coefficient of Determination: 0.5391808694107084 RMSE: 0.7876577143766689 NRMSE: 0.12757243276483898 MAPE: 153.68920103222936 Protein: CDH2 x_train_column_count: 1 x_train columns: ['CDH2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.15002477351668805 Spearman Correlation: 0.021027718948557195 Coefficient of Determination: 0.02250743266873345 RMSE: 0.366993371962299 NRMSE: 0.1355784991382294 MAPE: 373.67876553512673 Pearson Correlation: 0.10564670001853974 Spearman Correlation: 0.11871524729294705 Coefficient of Determination: 0.008640461878668515 RMSE: 0.3734908911193236 NRMSE: 0.19274959545818424 MAPE: 104.18723456874639 Predictor: ElasticNet Pearson Correlation: 0.15002477351668805 Spearman Correlation: 0.021027718948557195 Coefficient of Determination: 0.021389823238000316 RMSE: 0.367203111707208 NRMSE: 0.13565598337090737 MAPE: 391.79335613369665 Pearson Correlation: 0.10564670001853971 Spearman Correlation: 0.11871524729294705 Coefficient of Determination: 0.007373318183814814 RMSE: 0.3737295106489882 NRMSE: 0.192872741213288 MAPE: 104.42104625430859 Predictor: RandomForests Pearson Correlation: 0.19331701961991646 Spearman Correlation: 0.1288920303560814 Coefficient of Determination: 0.03662847645748135 RMSE: 0.36433290051662137 NRMSE: 0.1345956401735663 MAPE: 517.4362375376886 Pearson Correlation: 0.044230558158288136 Spearman Correlation: -0.05978684567685635 Coefficient of Determination: -0.006409334490806495 RMSE: 0.3763151890353155 NRMSE: 0.19420714715142465 MAPE: 98.36754929438122 Protein: CDH3 x_train_column_count: 1 x_train columns: ['CDH3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.24821600086503437 Spearman Correlation: 0.3061115403229242 Coefficient of Determination: 0.061611183085430676 RMSE: 0.2022653234074646 NRMSE: 0.14190472821425085 MAPE: 292.6260357700163 Pearson Correlation: 0.4229275133140767 Spearman Correlation: 0.4640717978733782 Coefficient of Determination: 0.16217388422713308 RMSE: 0.187257270741668 NRMSE: 0.14332632030498657 MAPE: 198.45611925540754 Predictor: ElasticNet Pearson Correlation: 0.24821600086503437 Spearman Correlation: 0.3061115403229242 Coefficient of Determination: 0.05692412031486016 RMSE: 0.20276983144950572 NRMSE: 0.14225867952622898 MAPE: 234.80439124339486 Pearson Correlation: 0.4229275133140768 Spearman Correlation: 0.4640717978733782 Coefficient of Determination: 0.1374548654963682 RMSE: 0.18999958718841511 NRMSE: 0.14542528353278208 MAPE: 167.23048620676332 Predictor: RandomForests Pearson Correlation: 0.3496682668189332 Spearman Correlation: 0.3307097672586625 Coefficient of Determination: 0.12015906260707776 RMSE: 0.19585384588255172 NRMSE: 0.13740658211437934 MAPE: 381.1612404025096 Pearson Correlation: 0.4456557812474688 Spearman Correlation: 0.4605862331967038 Coefficient of Determination: 0.17847992914693533 RMSE: 0.1854260861696705 NRMSE: 0.14192473549354423 MAPE: 326.56281030401266 Protein: PTEN x_train_column_count: 1 x_train columns: ['PTEN'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 0.40237188375210986 Spearman Correlation: 0.4288996648292669 Coefficient of Determination: 0.1619031328342213 RMSE: 0.5735222164263055 NRMSE: 0.08967589968357526 MAPE: 434.8953920378394 Pearson Correlation: 0.381535639013247 Spearman Correlation: 0.40280460442883625 Coefficient of Determination: 0.13841605075416663 RMSE: 0.4610133775957622 NRMSE: 0.15193902102556264 MAPE: 168.22638894726825 Predictor: ElasticNet Pearson Correlation: 0.4023718837521097 Spearman Correlation: 0.4288996648292669 Coefficient of Determination: 0.15970241322362677 RMSE: 0.5742747154281592 NRMSE: 0.08979356038279403 MAPE: 376.94233978831886 Pearson Correlation: 0.38153563901324694 Spearman Correlation: 0.40280460442883625 Coefficient of Determination: 0.14455699384362297 RMSE: 0.45936750224702333 NRMSE: 0.1513965797399721 MAPE: 155.0539746444181 Predictor: RandomForests Pearson Correlation: 0.4510661366641352 Spearman Correlation: 0.4465246887841456 Coefficient of Determination: 0.199567912918601 RMSE: 0.5604867911010524 NRMSE: 0.08763768135424163 MAPE: 529.5491842611985 Pearson Correlation: 0.3866330546263069 Spearman Correlation: 0.3981096259406254 Coefficient of Determination: 0.13840788698258943 RMSE: 0.4610155617120034 NRMSE: 0.15193974085821746 MAPE: 202.21690083920234 Protein: BRCA2 x_train_column_count: 1 x_train columns: ['BRCA2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.0016801136622338585 Spearman Correlation: -0.003365850045682841 Coefficient of Determination: 2.822781917766193e-06 RMSE: 0.1976109479453672 NRMSE: 0.1278323702957365 MAPE: 122.66734984794756 Pearson Correlation: -0.08404684070019278 Spearman Correlation: -0.06737887447433855 Coefficient of Determination: -0.005063311169702267 RMSE: 0.1852017608932443 NRMSE: 0.18535004092598512 MAPE: 104.34165552314427 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: RandomForests Pearson Correlation: 0.3257942376102405 Spearman Correlation: 0.25500959044958793 Coefficient of Determination: 0.04912356112431371 RMSE: 0.19269642508331206 NRMSE: 0.12465321897410636 MAPE: 133.9139947559344 Pearson Correlation: -0.03975777992192093 Spearman Correlation: -0.01067431406904905 Coefficient of Determination: -0.021845741347306546 RMSE: 0.18674159822161593 NRMSE: 0.18689111111050435 MAPE: 115.13583396986726 Protein: CDKN2A x_train_column_count: 1 x_train columns: ['CDKN2A'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 0.48027814349293335 Spearman Correlation: 0.4872043250292133 Coefficient of Determination: 0.23066709511701877 RMSE: 0.5637355359917146 NRMSE: 0.12744106160093013 MAPE: 154.405934596002 Pearson Correlation: 0.5965712816312629 Spearman Correlation: 0.5412203687445128 Coefficient of Determination: 0.351308157175233 RMSE: 0.6015355101867073 NRMSE: 0.16244545238636438 MAPE: 147.69299397970616 Predictor: ElasticNet Pearson Correlation: 0.48027814349293335 Spearman Correlation: 0.4872043250292133 Coefficient of Determination: 0.22704936806702125 RMSE: 0.5650594422796019 NRMSE: 0.1277403509166049 MAPE: 159.97743505692895 Pearson Correlation: 0.5965712816312629 Spearman Correlation: 0.5412203687445128 Coefficient of Determination: 0.3387199150903565 RMSE: 0.6073440391427579 NRMSE: 0.16401405323866 MAPE: 181.68431518226043 Predictor: RandomForests Pearson Correlation: 0.6031166548470466 Spearman Correlation: 0.5142043852276713 Coefficient of Determination: 0.36338257195258583 RMSE: 0.5128112215701984 NRMSE: 0.11592883950948307 MAPE: 222.42155552398435 Pearson Correlation: 0.6736173012257093 Spearman Correlation: 0.5183481629817652 Coefficient of Determination: 0.4416816519711879 RMSE: 0.5580627074004604 NRMSE: 0.15070556505548485 MAPE: 518.4052407636528 Protein: TP53 x_train_column_count: 1 x_train columns: ['TP53'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.3555492854195285 Spearman Correlation: 0.2977431207885347 Coefficient of Determination: 0.12641529436233723 RMSE: 0.4232312227924494 NRMSE: 0.1017138242711967 MAPE: 551.3587248678077 Pearson Correlation: 0.2926026738474283 Spearman Correlation: 0.2420007804116672 Coefficient of Determination: 0.06543743518250433 RMSE: 0.4066420333449024 NRMSE: 0.1462267731111879 MAPE: 771.4393165883603 Predictor: ElasticNet Pearson Correlation: 0.3555492854195285 Spearman Correlation: 0.2977431207885347 Coefficient of Determination: 0.12374569682247216 RMSE: 0.4238774080762002 NRMSE: 0.10186911994140838 MAPE: 522.8469954547722 Pearson Correlation: 0.29260267384742833 Spearman Correlation: 0.2420007804116672 Coefficient of Determination: 0.07912626689428537 RMSE: 0.40365294056753254 NRMSE: 0.14515190785987722 MAPE: 655.3659066646218 Predictor: RandomForests Pearson Correlation: 0.45492238975734456 Spearman Correlation: 0.34634270161779623 Coefficient of Determination: 0.20619176236443626 RMSE: 0.40344374717794973 NRMSE: 0.09695836269597446 MAPE: 668.2271002590516 Pearson Correlation: 0.32834898408627644 Spearman Correlation: 0.28867684750577033 Coefficient of Determination: 0.09003759286253088 RMSE: 0.4012543959578011 NRMSE: 0.14428940125779463 MAPE: 1228.5518791228187 Protein: CTNNB1 x_train_column_count: 1 x_train columns: ['CTNNB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 0.08898105342822928 Spearman Correlation: 0.14590811000321963 Coefficient of Determination: 0.007917627869197141 RMSE: 0.7343107892164393 NRMSE: 0.1479958057150653 MAPE: 635.7829662685036 Pearson Correlation: -0.002401946823815699 Spearman Correlation: -0.034040581406692035 Coefficient of Determination: -0.022319441458223288 RMSE: 0.7592919987705886 NRMSE: 0.1883818783234726 MAPE: 284.0557468282036 Predictor: ElasticNet Pearson Correlation: 0.08898105342822929 Spearman Correlation: 0.14590811000321963 Coefficient of Determination: 0.007545582007248086 RMSE: 0.7344484651240611 NRMSE: 0.14802355344419477 MAPE: 641.8973917786813 Pearson Correlation: -0.002401946823815745 Spearman Correlation: -0.034040581406692035 Coefficient of Determination: -0.020061602593201 RMSE: 0.7584530698987669 NRMSE: 0.18817373837611448 MAPE: 293.1436637677291 Predictor: RandomForests Pearson Correlation: 0.3101921197195444 Spearman Correlation: 0.30218639412689285 Coefficient of Determination: 0.08112196149899753 RMSE: 0.7066998169279368 NRMSE: 0.14243098472860852 MAPE: 629.3479296651823 Pearson Correlation: -0.06030718098076416 Spearman Correlation: -0.04014575748895606 Coefficient of Determination: -0.07580801753149946 RMSE: 0.7789021484733238 NRMSE: 0.19324719606840765 MAPE: 401.6201927378137 Protein: CCNE1 x_train_column_count: 1 x_train columns: ['CCNE1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.7219395993512735 Spearman Correlation: 0.7131090453751777 Coefficient of Determination: 0.5211967851114769 RMSE: 0.3346791994961411 NRMSE: 0.08076820220965347 MAPE: 91.95768178212866 Pearson Correlation: 0.7713064884061223 Spearman Correlation: 0.7106623744024974 Coefficient of Determination: 0.5218333477620515 RMSE: 0.3713609996544497 NRMSE: 0.13227462142634006 MAPE: 54.38203983643349 Predictor: ElasticNet Pearson Correlation: 0.7219395993512734 Spearman Correlation: 0.7131090453751777 Coefficient of Determination: 0.5157710926309755 RMSE: 0.33657011318703295 NRMSE: 0.08122453681179452 MAPE: 94.36234957422688 Pearson Correlation: 0.7713064884061223 Spearman Correlation: 0.7106623744024974 Coefficient of Determination: 0.49145500297987377 RMSE: 0.3829758095538306 NRMSE: 0.13641168639495302 MAPE: 57.325425996766754 Predictor: RandomForests Pearson Correlation: 0.8562861508639215 Spearman Correlation: 0.7204360697849619 Coefficient of Determination: 0.7279163800285591 RMSE: 0.25229078682087813 NRMSE: 0.06088538910173954 MAPE: 54.30365639848357 Pearson Correlation: 0.8350602153703399 Spearman Correlation: 0.7068832036023305 Coefficient of Determination: 0.6949121277125943 RMSE: 0.29663276628948443 NRMSE: 0.10565726314852517 MAPE: 44.991407020009255 Protein: CCND1 x_train_column_count: 1 x_train columns: ['CCND1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 0.4014769912379663 Spearman Correlation: 0.3731637827526827 Coefficient of Determination: 0.16118377449348997 RMSE: 0.21879564097710175 NRMSE: 0.13153361206255892 MAPE: 347.3099767263441 Pearson Correlation: 0.4722252539569458 Spearman Correlation: 0.4734221051604722 Coefficient of Determination: 0.08521214291088708 RMSE: 0.22471429002535695 NRMSE: 0.1600437938189825 MAPE: 1097.9020914203454 Predictor: ElasticNet Pearson Correlation: 0.4014769912379663 Spearman Correlation: 0.3731637827526827 Coefficient of Determination: 0.15146289068647056 RMSE: 0.22005977986956152 NRMSE: 0.13229357580740975 MAPE: 361.16176170458004 Pearson Correlation: 0.47222525395694587 Spearman Correlation: 0.4734221051604722 Coefficient of Determination: 0.19487131632624488 RMSE: 0.2108157942505513 NRMSE: 0.15014514432977558 MAPE: 1150.8807789665116 Predictor: RandomForests Pearson Correlation: 0.4678371375434505 Spearman Correlation: 0.4000144577763212 Coefficient of Determination: 0.21263881710072907 RMSE: 0.21197871451568037 NRMSE: 0.12743547301083333 MAPE: 313.8994682707794 Pearson Correlation: 0.5051577497307473 Spearman Correlation: 0.4767786498993165 Coefficient of Determination: 0.2533320194705554 RMSE: 0.20301786639906733 NRMSE: 0.14459138111722075 MAPE: 1138.045040698996 Protein: ERBB2 x_train_column_count: 1 x_train columns: ['ERBB2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 0.7657610435301816 Spearman Correlation: 0.6137508967340191 Coefficient of Determination: 0.5863899757884328 RMSE: 0.6554327410192267 NRMSE: 0.11166375470964898 MAPE: 320.57308858431446 Pearson Correlation: 0.7627625013199513 Spearman Correlation: 0.7166081357916302 Coefficient of Determination: 0.5648365964407824 RMSE: 0.5983466371514002 NRMSE: 0.11094875526634532 MAPE: 281.0691986314359 Predictor: ElasticNet Pearson Correlation: 0.7657610435301816 Spearman Correlation: 0.6137508967340191 Coefficient of Determination: 0.5818619497632238 RMSE: 0.6590106742149663 NRMSE: 0.11227331451606834 MAPE: 343.49496156824915 Pearson Correlation: 0.7627625013199513 Spearman Correlation: 0.7166081357916302 Coefficient of Determination: 0.5491181726547959 RMSE: 0.6090571386965504 NRMSE: 0.11293475592370673 MAPE: 300.4058784707829 Predictor: RandomForests Pearson Correlation: 0.8350447059162798 Spearman Correlation: 0.6216515632506531 Coefficient of Determination: 0.6965509892505153 RMSE: 0.5614039541274837 NRMSE: 0.09564440331319891 MAPE: 467.4276979149924 Pearson Correlation: 0.8040149199599619 Spearman Correlation: 0.712575091635544 Coefficient of Determination: 0.6363330370305993 RMSE: 0.5469890053467115 NRMSE: 0.1014257380579847 MAPE: 341.96897482700155 Protein: ERBB3 x_train_column_count: 1 x_train columns: ['ERBB3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.4002107913871714 Spearman Correlation: 0.4461608353851102 Coefficient of Determination: 0.160168677542746 RMSE: 0.4207647918898243 NRMSE: 0.11355234069897321 MAPE: 200.24454248262978 Pearson Correlation: 0.4241326159508129 Spearman Correlation: 0.47324952839944506 Coefficient of Determination: 0.17570228561293066 RMSE: 0.42264869569030494 NRMSE: 0.16959131664512106 MAPE: 193.8904042665433 Predictor: ElasticNet Pearson Correlation: 0.40021079138717147 Spearman Correlation: 0.4461608353851102 Coefficient of Determination: 0.15730711184815838 RMSE: 0.4214810203548932 NRMSE: 0.1137456302047765 MAPE: 197.2877243317092 Pearson Correlation: 0.4241326159508129 Spearman Correlation: 0.47324952839944506 Coefficient of Determination: 0.1705193093701054 RMSE: 0.4239753677429299 NRMSE: 0.17012365487887207 MAPE: 194.35349477791942 Predictor: RandomForests Pearson Correlation: 0.4888583547909291 Spearman Correlation: 0.46249054756555785 Coefficient of Determination: 0.2374084059193693 RMSE: 0.40094921293402225 NRMSE: 0.10820468467806303 MAPE: 242.40227594442695 Pearson Correlation: 0.4306135180238071 Spearman Correlation: 0.47175791537273415 Coefficient of Determination: 0.17674257303902818 RMSE: 0.4223819140865897 NRMSE: 0.16948426830002475 MAPE: 270.9861842046686 Fold: 2 Protein: RB1 x_train_column_count: 1 x_train columns: ['RB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.24789230471088958 Spearman Correlation: 0.3159366197816136 Coefficient of Determination: 0.061450594734876685 RMSE: 0.227704938830993 NRMSE: 0.08327418769418996 MAPE: 202.73532724373035 Pearson Correlation: 0.05322314385144895 Spearman Correlation: 0.10746268656716418 Coefficient of Determination: -0.04577677934407487 RMSE: 0.25044677379227626 NRMSE: 0.14348797068457808 MAPE: 328.71307770952 Predictor: ElasticNet Pearson Correlation: 0.24789230471088963 Spearman Correlation: 0.3159366197816136 Coefficient of Determination: 0.05796256313582204 RMSE: 0.22812766855296912 NRMSE: 0.08342878457905542 MAPE: 167.92284614639414 Pearson Correlation: 0.05322314385144897 Spearman Correlation: 0.10746268656716418 Coefficient of Determination: -0.029735012666590288 RMSE: 0.2485184774280922 NRMSE: 0.14238319569392593 MAPE: 247.67184036074377 Predictor: RandomForests Pearson Correlation: 0.35614812748472296 Spearman Correlation: 0.4067656823580468 Coefficient of Determination: 0.11704931686327302 RMSE: 0.22085747588364613 NRMSE: 0.08076999556891681 MAPE: 212.91843709848632 Pearson Correlation: 0.11218713523215128 Spearman Correlation: 0.13196685330144695 Coefficient of Determination: -0.018378086466819266 RMSE: 0.24714422519366094 NRMSE: 0.14159584810169526 MAPE: 371.280873187673 Protein: CDH1 x_train_column_count: 1 x_train columns: ['CDH1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.4838912067728356 Spearman Correlation: 0.5479778011770806 Coefficient of Determination: 0.2341506999920714 RMSE: 0.9806662839711408 NRMSE: 0.1573219353446925 MAPE: 652.399138982943 Pearson Correlation: 0.5757959526475028 Spearman Correlation: 0.6868207979709298 Coefficient of Determination: 0.26633076007756606 RMSE: 0.9855576770404496 NRMSE: 0.1750235618967234 MAPE: 250.84860187842585 Predictor: ElasticNet Pearson Correlation: 0.48389120677283576 Spearman Correlation: 0.5479778011770806 Coefficient of Determination: 0.23179625352061894 RMSE: 0.9821725557758774 NRMSE: 0.15756357676680474 MAPE: 623.079347459191 Pearson Correlation: 0.5757959526475028 Spearman Correlation: 0.6868207979709298 Coefficient of Determination: 0.2519085868177381 RMSE: 0.9951973813917971 NRMSE: 0.17673546108893573 MAPE: 229.93924367515334 Predictor: RandomForests Pearson Correlation: 0.7350620519654282 Spearman Correlation: 0.5614465463510813 Coefficient of Determination: 0.5400871009269116 RMSE: 0.7599541298952075 NRMSE: 0.12191451510310539 MAPE: 218.3262024908791 Pearson Correlation: 0.6514144231909483 Spearman Correlation: 0.6951134521052208 Coefficient of Determination: 0.3838100091909181 RMSE: 0.9032109819804985 NRMSE: 0.16039974817625618 MAPE: 213.09904146139536 Protein: CDH2 x_train_column_count: 1 x_train columns: ['CDH2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.1470313787581837 Spearman Correlation: 0.03346468965108404 Coefficient of Determination: 0.021618226339532587 RMSE: 0.36409773078103375 NRMSE: 0.13192902774876214 MAPE: 381.9470937388793 Pearson Correlation: 0.11717867760285978 Spearman Correlation: 0.063681592039801 Coefficient of Determination: 0.012877190177729814 RMSE: 0.3845800481612378 NRMSE: 0.2026056929364798 MAPE: 121.67281423224681 Predictor: ElasticNet Pearson Correlation: 0.14703137875818367 Spearman Correlation: 0.03346468965108404 Coefficient of Determination: 0.02042216840236355 RMSE: 0.364320214979518 NRMSE: 0.13200964380734764 MAPE: 398.60075060181646 Pearson Correlation: 0.11717867760285976 Spearman Correlation: 0.063681592039801 Coefficient of Determination: 0.011366622098089696 RMSE: 0.38487419204171014 NRMSE: 0.20276065475785107 MAPE: 124.75803606638401 Predictor: RandomForests Pearson Correlation: 0.19455280933418412 Spearman Correlation: 0.14521011138581139 Coefficient of Determination: 0.03651059964118086 RMSE: 0.3613160602024537 NRMSE: 0.13092110305183483 MAPE: 424.3360219113005 Pearson Correlation: 0.11830349762100852 Spearman Correlation: 0.0855059428777579 Coefficient of Determination: 0.010769358098726367 RMSE: 0.3849904316896376 NRMSE: 0.20282189250153443 MAPE: 124.97634642871276 Protein: CDH3 x_train_column_count: 1 x_train columns: ['CDH3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.3303764572390311 Spearman Correlation: 0.3550272027884919 Coefficient of Determination: 0.10914860349781341 RMSE: 0.1960438181206852 NRMSE: 0.1475422532197551 MAPE: 270.9980417434455 Pearson Correlation: 0.10770672491069783 Spearman Correlation: 0.25419471271095506 Coefficient of Determination: -0.1811343074896139 RMSE: 0.21510760863297937 NRMSE: 0.17699959568253057 MAPE: 624.4702544671215 Predictor: ElasticNet Pearson Correlation: 0.3303764572390311 Spearman Correlation: 0.3550272027884919 Coefficient of Determination: 0.10444287039367006 RMSE: 0.19656091604995224 NRMSE: 0.14793142026593228 MAPE: 229.42282633795702 Pearson Correlation: 0.10770672491069783 Spearman Correlation: 0.25419471271095506 Coefficient of Determination: -0.15988982330622492 RMSE: 0.21316431311611922 NRMSE: 0.17540057032512074 MAPE: 536.5420737186791 Predictor: RandomForests Pearson Correlation: 0.4204408504993642 Spearman Correlation: 0.38155013256774595 Coefficient of Determination: 0.17584235816615323 RMSE: 0.18856264633511197 NRMSE: 0.14191193570937055 MAPE: 407.97875051638437 Pearson Correlation: 0.15295236629097841 Spearman Correlation: 0.25482125674289846 Coefficient of Determination: -0.20407823566708516 RMSE: 0.21718682836391678 NRMSE: 0.17871046520523065 MAPE: 749.9682708776052 Protein: PTEN x_train_column_count: 1 x_train columns: ['PTEN'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.41283271851189246 Spearman Correlation: 0.4509122731754614 Coefficient of Determination: 0.1704308534739195 RMSE: 0.5681154375639597 NRMSE: 0.08883049606191222 MAPE: 340.1165131813269 Pearson Correlation: 0.36350671177055427 Spearman Correlation: 0.32171495463857186 Coefficient of Determination: 0.08295221188442037 RMSE: 0.4899504108238007 NRMSE: 0.16432466153199649 MAPE: 696.19065149665 Predictor: ElasticNet Pearson Correlation: 0.41283271851189235 Spearman Correlation: 0.4509122731754614 Coefficient of Determination: 0.16778465630164663 RMSE: 0.5690208162892582 NRMSE: 0.08897206102560522 MAPE: 299.45292231095704 Pearson Correlation: 0.3635067117705542 Spearman Correlation: 0.32171495463857186 Coefficient of Determination: 0.11000469508032096 RMSE: 0.4826696595746547 NRMSE: 0.16188276749887803 MAPE: 580.2550515852016 Predictor: RandomForests Pearson Correlation: 0.4637617822650544 Spearman Correlation: 0.47168364395156603 Coefficient of Determination: 0.21156824157538845 RMSE: 0.5538502419387915 NRMSE: 0.08659999092155289 MAPE: 387.81209059025514 Pearson Correlation: 0.3283337114702817 Spearman Correlation: 0.31888806115781315 Coefficient of Determination: 0.06748232850836522 RMSE: 0.49406566940135677 NRMSE: 0.16570487972945963 MAPE: 807.3513768694605 Protein: BRCA2 x_train_column_count: 1 x_train columns: ['BRCA2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.040011582892672495 Spearman Correlation: 0.057472501576392276 Coefficient of Determination: 0.0016009267655772152 RMSE: 0.19516798278839598 NRMSE: 0.12573231295757512 MAPE: 117.98294827979335 Pearson Correlation: -0.07561513606008484 Spearman Correlation: -0.13059701492537315 Coefficient of Determination: -0.02452145724173871 RMSE: 0.19554203218990604 NRMSE: 0.13236178253329048 MAPE: 118.7555136669517 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: RandomForests Pearson Correlation: 0.3068850157044312 Spearman Correlation: 0.25247642075531285 Coefficient of Determination: 0.044202194303427866 RMSE: 0.19095872370308548 NRMSE: 0.12302059829478852 MAPE: 126.6880580191218 Pearson Correlation: 0.07896059153515289 Spearman Correlation: 0.05877387777856347 Coefficient of Determination: -0.011046221373264498 RMSE: 0.19425182166951882 NRMSE: 0.13148844311664884 MAPE: 123.9361936403578 Protein: CDKN2A x_train_column_count: 1 x_train columns: ['CDKN2A'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.5036612591893176 Spearman Correlation: 0.4759909513511134 Coefficient of Determination: 0.25367466400816874 RMSE: 0.5730645647248521 NRMSE: 0.1295500315869452 MAPE: 165.2072915351226 Pearson Correlation: 0.5627834065476419 Spearman Correlation: 0.5756072578285046 Coefficient of Determination: 0.2930656148585532 RMSE: 0.5662177809563149 NRMSE: 0.15296568536749378 MAPE: 173.217205001395 Predictor: ElasticNet Pearson Correlation: 0.5036612591893176 Spearman Correlation: 0.4759909513511134 Coefficient of Determination: 0.2508912599037243 RMSE: 0.5741321861471319 NRMSE: 0.12979138377916397 MAPE: 177.02278482076855 Pearson Correlation: 0.562783406547642 Spearman Correlation: 0.5756072578285046 Coefficient of Determination: 0.2780404114878976 RMSE: 0.5722033481701979 NRMSE: 0.15458270698352009 MAPE: 179.71328964800034 Predictor: RandomForests Pearson Correlation: 0.6040027516191304 Spearman Correlation: 0.4861296560239233 Coefficient of Determination: 0.36433447381499207 RMSE: 0.528875917565927 NRMSE: 0.11956051035739278 MAPE: 257.31980271784846 Pearson Correlation: 0.6768078158008014 Spearman Correlation: 0.569489990183919 Coefficient of Determination: 0.44303391666723235 RMSE: 0.5025836141073503 NRMSE: 0.13577469583621957 MAPE: 209.43106914074932 Protein: TP53 x_train_column_count: 1 x_train columns: ['TP53'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 0.3251680923816741 Spearman Correlation: 0.28717437803663004 Coefficient of Determination: 0.10573428830313691 RMSE: 0.43057838556509015 NRMSE: 0.11532834754656225 MAPE: 395.9150748360344 Pearson Correlation: 0.41091156162636316 Spearman Correlation: 0.3101990049751244 Coefficient of Determination: 0.1669877225256251 RMSE: 0.37364228584578285 NRMSE: 0.12305031643200488 MAPE: 1296.9861916301588 Predictor: ElasticNet Pearson Correlation: 0.32516809238167405 Spearman Correlation: 0.28717437803663004 Coefficient of Determination: 0.1032686027226114 RMSE: 0.4311715762103808 NRMSE: 0.11548723080497679 MAPE: 357.0037206023843 Pearson Correlation: 0.4109115616263631 Spearman Correlation: 0.3101990049751244 Coefficient of Determination: 0.1645987581097338 RMSE: 0.37417767955418024 NRMSE: 0.12322663578270385 MAPE: 1229.8937285121378 Predictor: RandomForests Pearson Correlation: 0.41836058695215167 Spearman Correlation: 0.35514670974367946 Coefficient of Determination: 0.17435957320281414 RMSE: 0.4137275203739926 NRMSE: 0.11081492443390721 MAPE: 505.56269271180315 Pearson Correlation: 0.46793918082121677 Spearman Correlation: 0.28068144997753247 Coefficient of Determination: 0.21780722524703144 RMSE: 0.36206556235238085 NRMSE: 0.11923779428696882 MAPE: 1845.1105999300512 Protein: CTNNB1 x_train_column_count: 1 x_train columns: ['CTNNB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.06641728094381413 Spearman Correlation: 0.11831189699055593 Coefficient of Determination: 0.004411255207969478 RMSE: 0.7233827756464993 NRMSE: 0.14228614784549556 MAPE: 607.0010833449173 Pearson Correlation: 0.13956120176564732 Spearman Correlation: 0.1409813676714467 Coefficient of Determination: -0.11076417840848163 RMSE: 0.8078718363971094 NRMSE: 0.20105817087606317 MAPE: 216.94387718013633 Predictor: ElasticNet Pearson Correlation: 0.06641728094381413 Spearman Correlation: 0.11831189699055593 Coefficient of Determination: 0.003988830124550979 RMSE: 0.7235362238570153 NRMSE: 0.14231633042034134 MAPE: 613.4813598376205 Pearson Correlation: 0.13956120176564735 Spearman Correlation: 0.1409813676714467 Coefficient of Determination: -0.11092527005545061 RMSE: 0.8079304161969478 NRMSE: 0.20107274985613796 MAPE: 236.04303747097165 Predictor: RandomForests Pearson Correlation: 0.2846108698980282 Spearman Correlation: 0.29112484755208995 Coefficient of Determination: 0.06903793114490742 RMSE: 0.6995103870594284 NRMSE: 0.13759055606991116 MAPE: 631.5545292503399 Pearson Correlation: 0.0711397534338752 Spearman Correlation: 0.14282184909213674 Coefficient of Determination: -0.1285956971281863 RMSE: 0.8143305550615784 NRMSE: 0.20266557702933685 MAPE: 489.1762361982494 Protein: CCNE1 x_train_column_count: 1 x_train columns: ['CCNE1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.7299247116090841 Spearman Correlation: 0.7061567494715154 Coefficient of Determination: 0.5327900846176046 RMSE: 0.35051079946653413 NRMSE: 0.08458884558885396 MAPE: 90.83614166716927 Pearson Correlation: 0.7770270702564803 Spearman Correlation: 0.7531411569602966 Coefficient of Determination: 0.46747886325152765 RMSE: 0.30523096808283556 NRMSE: 0.16588729725859142 MAPE: 56.09620217722179 Predictor: ElasticNet Pearson Correlation: 0.729924711609084 Spearman Correlation: 0.7061567494715154 Coefficient of Determination: 0.528139638060198 RMSE: 0.35225091194684366 NRMSE: 0.08500878730285583 MAPE: 93.152131284349 Pearson Correlation: 0.7770270702564801 Spearman Correlation: 0.7531411569602966 Coefficient of Determination: 0.439129355192716 RMSE: 0.31325032050888396 NRMSE: 0.17024566465517965 MAPE: 58.0497980645578 Predictor: RandomForests Pearson Correlation: 0.8577101219397514 Spearman Correlation: 0.7101695638315398 Coefficient of Determination: 0.7317659742467798 RMSE: 0.26558424714779255 NRMSE: 0.06409350270236565 MAPE: 67.88985778990819 Pearson Correlation: 0.8351430823920907 Spearman Correlation: 0.7370836679134409 Coefficient of Determination: 0.6941548923260417 RMSE: 0.2313188038212206 NRMSE: 0.12571742445405715 MAPE: 40.56267191069466 Protein: CCND1 x_train_column_count: 1 x_train columns: ['CCND1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.4223602741689214 Spearman Correlation: 0.3945270040292828 Coefficient of Determination: 0.17838820119604637 RMSE: 0.21640426284054698 NRMSE: 0.13009598468248967 MAPE: 534.8786478153853 Pearson Correlation: 0.2969521452872802 Spearman Correlation: 0.3886206223783046 Coefficient of Determination: 0.08424001920543 RMSE: 0.2252951966327131 NRMSE: 0.17430153852255456 MAPE: 350.0330656369793 Predictor: ElasticNet Pearson Correlation: 0.42236027416892147 Spearman Correlation: 0.3945270040292828 Coefficient of Determination: 0.17376665667810776 RMSE: 0.21701204346327752 NRMSE: 0.13046136481662932 MAPE: 549.658733909338 Pearson Correlation: 0.2969521452872802 Spearman Correlation: 0.3886206223783046 Coefficient of Determination: 0.08177048830311717 RMSE: 0.22559876900624823 NRMSE: 0.17453639986248085 MAPE: 360.735372666207 Predictor: RandomForests Pearson Correlation: 0.5009246505960983 Spearman Correlation: 0.40965593127045014 Coefficient of Determination: 0.2468749440121255 RMSE: 0.20718868121322256 NRMSE: 0.12455584351109315 MAPE: 491.23954825070194 Pearson Correlation: 0.3225095409332166 Spearman Correlation: 0.3839087800361473 Coefficient of Determination: 0.09369217172592081 RMSE: 0.22412947187967547 NRMSE: 0.17339966568644818 MAPE: 339.86681722580477 Protein: ERBB2 x_train_column_count: 1 x_train columns: ['ERBB2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.7536423359707012 Spearman Correlation: 0.6630955260861322 Coefficient of Determination: 0.5679767705673753 RMSE: 0.6461166342040771 NRMSE: 0.11595151628664592 MAPE: 210.20197949285438 Pearson Correlation: 0.8108498416783881 Spearman Correlation: 0.5166032582187103 Coefficient of Determination: 0.6340678454836575 RMSE: 0.6395258414521927 NRMSE: 0.10895375256864792 MAPE: 809.0116931903328 Predictor: ElasticNet Pearson Correlation: 0.7536423359707011 Spearman Correlation: 0.6630955260861322 Coefficient of Determination: 0.5626654402648787 RMSE: 0.6500762079549097 NRMSE: 0.11666209786890686 MAPE: 226.38026907451376 Pearson Correlation: 0.810849841678388 Spearman Correlation: 0.5166032582187103 Coefficient of Determination: 0.6194144024898142 RMSE: 0.6522047930138986 NRMSE: 0.1111138206405606 MAPE: 858.337557835572 Predictor: RandomForests Pearson Correlation: 0.8389294424186137 Spearman Correlation: 0.6674393366047144 Coefficient of Determination: 0.7023030045025691 RMSE: 0.5363454470636926 NRMSE: 0.09625207671225393 MAPE: 280.2953308487789 Pearson Correlation: 0.8161121853257634 Spearman Correlation: 0.5012523821949281 Coefficient of Determination: 0.6428254688684671 RMSE: 0.63182681426791 NRMSE: 0.10764209657527812 MAPE: 1420.7544425542162 Protein: ERBB3 x_train_column_count: 1 x_train columns: ['ERBB3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.4140202554588074 Spearman Correlation: 0.4574811032948563 Coefficient of Determination: 0.17141277193017623 RMSE: 0.4051902314315764 NRMSE: 0.10934921384644226 MAPE: 181.83691718420613 Pearson Correlation: 0.3821239191505737 Spearman Correlation: 0.4416544727343674 Coefficient of Determination: 0.14278323145190197 RMSE: 0.47938761999648344 NRMSE: 0.17692256761963376 MAPE: 302.11907423555215 Predictor: ElasticNet Pearson Correlation: 0.4140202554588075 Spearman Correlation: 0.4574811032948563 Coefficient of Determination: 0.1681558775218711 RMSE: 0.40598578289037185 NRMSE: 0.10956391035155374 MAPE: 180.57274002624737 Pearson Correlation: 0.3821239191505737 Spearman Correlation: 0.4416544727343674 Coefficient of Determination: 0.14253747206924283 RMSE: 0.4794563339827928 NRMSE: 0.17694792717082394 MAPE: 298.18932508324974 Predictor: RandomForests Pearson Correlation: 0.4937926972662044 Spearman Correlation: 0.47011878226411286 Coefficient of Determination: 0.24235048330361064 RMSE: 0.38745745765908807 NRMSE: 0.10456364716462097 MAPE: 216.39720242867085 Pearson Correlation: 0.43320350506909144 Spearman Correlation: 0.44593650227107995 Coefficient of Determination: 0.18582907647625257 RMSE: 0.46719617614868336 NRMSE: 0.1724231991366529 MAPE: 360.2215328744491 Fold: 3 Protein: RB1 x_train_column_count: 1 x_train columns: ['RB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.20536425783313839 Spearman Correlation: 0.28181864803860485 Coefficient of Determination: 0.04217447839535582 RMSE: 0.23545330468119732 NRMSE: 0.08610784986878194 MAPE: 195.9849562117184 Pearson Correlation: 0.21090088456074754 Spearman Correlation: 0.26769161710245765 Coefficient of Determination: 0.022118335834523384 RMSE: 0.21919993277299263 NRMSE: 0.15380940312740687 MAPE: 232.70273205909703 Predictor: ElasticNet Pearson Correlation: 0.20536425783313839 Spearman Correlation: 0.28181864803860485 Coefficient of Determination: 0.03897284962338965 RMSE: 0.23584648964374155 NRMSE: 0.08625164191184229 MAPE: 152.18347231450548 Pearson Correlation: 0.2109008845607475 Spearman Correlation: 0.26769161710245765 Coefficient of Determination: 0.01988598260982022 RMSE: 0.21944998998635348 NRMSE: 0.15398486463530142 MAPE: 208.55562782465543 Predictor: RandomForests Pearson Correlation: 0.3151512292058805 Spearman Correlation: 0.3524539498229516 Coefficient of Determination: 0.09186867165257584 RMSE: 0.22926402724699074 NRMSE: 0.08384436338757707 MAPE: 273.67842010321056 Pearson Correlation: 0.2300590252443082 Spearman Correlation: 0.28681957460006946 Coefficient of Determination: 0.025303836965301807 RMSE: 0.2188426138644487 NRMSE: 0.15355867764882655 MAPE: 235.88853086302066 Protein: CDH1 x_train_column_count: 1 x_train columns: ['CDH1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.5061521824683968 Spearman Correlation: 0.6060433571893057 Coefficient of Determination: 0.2561900318175212 RMSE: 1.0131204376541854 NRMSE: 0.1613197728821033 MAPE: 729.5897156629053 Pearson Correlation: 0.49632021780749225 Spearman Correlation: 0.46526016533872 Coefficient of Determination: 0.21170636467694093 RMSE: 0.8359546694956115 NRMSE: 0.16434448737773985 MAPE: 349.9480456347325 Predictor: ElasticNet Pearson Correlation: 0.5061521824683969 Spearman Correlation: 0.6060433571893057 Coefficient of Determination: 0.25404536270275546 RMSE: 1.014579979885437 NRMSE: 0.1615521766640293 MAPE: 704.0271980583447 Pearson Correlation: 0.49632021780749236 Spearman Correlation: 0.46526016533872 Coefficient of Determination: 0.20827040532685992 RMSE: 0.8377745390435329 NRMSE: 0.16470226458607576 MAPE: 334.8174335642665 Predictor: RandomForests Pearson Correlation: 0.720658592011157 Spearman Correlation: 0.6176291946545054 Coefficient of Determination: 0.5189174241027371 RMSE: 0.8147791240760056 NRMSE: 0.12973776696219955 MAPE: 282.7560913470706 Pearson Correlation: 0.7353301371123111 Spearman Correlation: 0.46500928923410684 Coefficient of Determination: 0.538426650574287 RMSE: 0.63967456230514 NRMSE: 0.1257568046052648 MAPE: 186.00534358064274 Protein: CDH2 x_train_column_count: 1 x_train columns: ['CDH2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.1426127701108289 Spearman Correlation: -0.004338932550925531 Coefficient of Determination: 0.020338402198684102 RMSE: 0.37734116573013987 NRMSE: 0.13672772147624462 MAPE: 205.27568788923608 Pearson Correlation: 0.1451886540719864 Spearman Correlation: 0.23133206149702618 Coefficient of Determination: 0.0139564430879906 RMSE: 0.32965367947159396 NRMSE: 0.17369574444727484 MAPE: 675.7840877768981 Predictor: ElasticNet Pearson Correlation: 0.1426127701108289 Spearman Correlation: -0.004338932550925531 Coefficient of Determination: 0.019271255403014664 RMSE: 0.3775466289313753 NRMSE: 0.13680217005992293 MAPE: 226.61163917347693 Pearson Correlation: 0.1451886540719864 Spearman Correlation: 0.23133206149702618 Coefficient of Determination: 0.011446861045972812 RMSE: 0.3300729141142803 NRMSE: 0.1739166407329654 MAPE: 660.5025650626128 Predictor: RandomForests Pearson Correlation: 0.23493300907448675 Spearman Correlation: 0.21194477216286742 Coefficient of Determination: 0.04976239614304989 RMSE: 0.3716312713312571 NRMSE: 0.1346587692337333 MAPE: 387.79228301128836 Pearson Correlation: -0.02522530974628973 Spearman Correlation: -0.1851350763201282 Coefficient of Determination: -0.0407518659493773 RMSE: 0.33867526307154056 NRMSE: 0.17844925025372552 MAPE: 642.4010366244271 Protein: CDH3 x_train_column_count: 1 x_train columns: ['CDH3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.3026146976584992 Spearman Correlation: 0.3386347347546788 Coefficient of Determination: 0.09157565523894473 RMSE: 0.2025467087768724 NRMSE: 0.14210214175848376 MAPE: 362.29550072593304 Pearson Correlation: 0.22440362464908514 Spearman Correlation: 0.31279442387062184 Coefficient of Determination: 0.023797504951999726 RMSE: 0.18607390663573836 NRMSE: 0.16184984094195584 MAPE: 145.37630242559345 Predictor: ElasticNet Pearson Correlation: 0.30261469765849924 Spearman Correlation: 0.3386347347546788 Coefficient of Determination: 0.08667683033336748 RMSE: 0.2030921073878006 NRMSE: 0.14248478095905637 MAPE: 297.3853059154741 Pearson Correlation: 0.22440362464908517 Spearman Correlation: 0.31279442387062184 Coefficient of Determination: 0.042925379414417986 RMSE: 0.18424190653417474 NRMSE: 0.16025634010992262 MAPE: 132.17162239671106 Predictor: RandomForests Pearson Correlation: 0.38429063561532717 Spearman Correlation: 0.366929487494884 Coefficient of Determination: 0.14614884835263475 RMSE: 0.19636853167347101 NRMSE: 0.13776767390236222 MAPE: 480.79342950124743 Pearson Correlation: 0.27910731531306143 Spearman Correlation: 0.30860684283191253 Coefficient of Determination: 0.0655555461704449 RMSE: 0.1820506628174801 NRMSE: 0.15835036385874218 MAPE: 188.00773874257487 Protein: PTEN x_train_column_count: 1 x_train columns: ['PTEN'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 0.39398785459126584 Spearman Correlation: 0.4168387026449609 Coefficient of Determination: 0.1552264295654282 RMSE: 0.5783942541009418 NRMSE: 0.0904376912049006 MAPE: 436.8188934942037 Pearson Correlation: 0.3976334585902839 Spearman Correlation: 0.39053105400316723 Coefficient of Determination: 0.14618246318251082 RMSE: 0.4351761587473583 NRMSE: 0.10404441226685754 MAPE: 116.83152125957915 Predictor: ElasticNet Pearson Correlation: 0.3939878545912659 Spearman Correlation: 0.4168387026449609 Coefficient of Determination: 0.15325486274814593 RMSE: 0.579068800742323 NRMSE: 0.09054316327766758 MAPE: 384.5167148400706 Pearson Correlation: 0.3976334585902839 Spearman Correlation: 0.39053105400316723 Coefficient of Determination: 0.1403118502586964 RMSE: 0.4366696712746754 NRMSE: 0.10440148980889288 MAPE: 109.86407899166011 Predictor: RandomForests Pearson Correlation: 0.4486456840284966 Spearman Correlation: 0.44022349775190645 Coefficient of Determination: 0.19703242003461852 RMSE: 0.5639009371276077 NRMSE: 0.08817151702409627 MAPE: 546.1899445028266 Pearson Correlation: 0.3687177757531359 Spearman Correlation: 0.405227077725146 Coefficient of Determination: 0.1312647338902646 RMSE: 0.43896135222360844 NRMSE: 0.10494939803557798 MAPE: 126.18039299878608 Protein: BRCA2 x_train_column_count: 1 x_train columns: ['BRCA2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.029598716808603837 Spearman Correlation: 0.007235394469500479 Coefficient of Determination: 0.0008760840367157963 RMSE: 0.18996688066183695 NRMSE: 0.12803418479351694 MAPE: 114.82449131210666 Pearson Correlation: -0.016054565654462935 Spearman Correlation: 0.05298569807603587 Coefficient of Determination: -0.005863409902131078 RMSE: 0.21475827190110194 NRMSE: 0.14771287504632535 MAPE: 112.83494974880834 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: RandomForests Pearson Correlation: 0.2847852536520081 Spearman Correlation: 0.24810712888855369 Coefficient of Determination: 0.04356944145348551 RMSE: 0.18586385299339783 NRMSE: 0.1252688195841519 MAPE: 118.71205027999494 Pearson Correlation: -0.008597785420769612 Spearman Correlation: -0.1128019880749639 Coefficient of Determination: -0.012088332481777764 RMSE: 0.2154217773299026 NRMSE: 0.14816924067838874 MAPE: 157.49003513886964 Protein: CDKN2A x_train_column_count: 1 x_train columns: ['CDKN2A'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.5076634573044784 Spearman Correlation: 0.4770131653521852 Coefficient of Determination: 0.2577221858823361 RMSE: 0.5751641428613341 NRMSE: 0.1342837464655711 MAPE: 175.60838217316672 Pearson Correlation: 0.536825509758858 Spearman Correlation: 0.5740296013666005 Coefficient of Determination: 0.2815143854042633 RMSE: 0.5565075134966199 NRMSE: 0.17180930304609918 MAPE: 120.0057721559081 Predictor: ElasticNet Pearson Correlation: 0.5076634573044784 Spearman Correlation: 0.4770131653521852 Coefficient of Determination: 0.2547918532150383 RMSE: 0.5762983288161221 NRMSE: 0.13454854520361462 MAPE: 188.28668730393682 Pearson Correlation: 0.536825509758858 Spearman Correlation: 0.5740296013666005 Coefficient of Determination: 0.27198375273225617 RMSE: 0.5601863593028318 NRMSE: 0.17294506477195262 MAPE: 124.46647817331929 Predictor: RandomForests Pearson Correlation: 0.6245172571557215 Spearman Correlation: 0.4954089061519607 Coefficient of Determination: 0.3894788522073944 RMSE: 0.5216256263174344 NRMSE: 0.12178409280851568 MAPE: 264.11801229845923 Pearson Correlation: 0.6251797457998285 Spearman Correlation: 0.5733110855363031 Coefficient of Determination: 0.38811166296195954 RMSE: 0.5135681488886652 NRMSE: 0.15855273035369863 MAPE: 124.73179501297591 Protein: TP53 x_train_column_count: 1 x_train columns: ['TP53'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.35194198538758936 Spearman Correlation: 0.29871023780362554 Coefficient of Determination: 0.12386316107855821 RMSE: 0.4213154057090008 NRMSE: 0.10125340199687595 MAPE: 571.7401607647246 Pearson Correlation: 0.2980744477164274 Spearman Correlation: 0.2638162570605619 Coefficient of Determination: 0.07494796243869972 RMSE: 0.41400359918732 NRMSE: 0.15438160234304485 MAPE: 478.6830311943444 Predictor: ElasticNet Pearson Correlation: 0.3519419853875892 Spearman Correlation: 0.29871023780362554 Coefficient of Determination: 0.12154735126766325 RMSE: 0.4218718498752976 NRMSE: 0.10138713046750723 MAPE: 528.4338533964211 Pearson Correlation: 0.2980744477164273 Spearman Correlation: 0.2638162570605619 Coefficient of Determination: 0.07625826957436366 RMSE: 0.4137102837396852 NRMSE: 0.15427222525336082 MAPE: 446.43951510681916 Predictor: RandomForests Pearson Correlation: 0.45570202069206317 Spearman Correlation: 0.35162246446507417 Coefficient of Determination: 0.2064007311866748 RMSE: 0.40097934166090254 NRMSE: 0.0963660998944731 MAPE: 818.1649159606385 Pearson Correlation: 0.2984791130638284 Spearman Correlation: 0.26907455660028845 Coefficient of Determination: 0.0658446370334902 RMSE: 0.4160356917475398 NRMSE: 0.15513936799090863 MAPE: 471.9253068166904 Protein: CTNNB1 x_train_column_count: 1 x_train columns: ['CTNNB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.05174747566636722 Spearman Correlation: 0.07873234122650967 Coefficient of Determination: 0.0026778012378414484 RMSE: 0.7681668709940904 NRMSE: 0.15109497855902645 MAPE: 433.42623646610565 Pearson Correlation: 0.2197278389173596 Spearman Correlation: 0.26859935909425303 Coefficient of Determination: 0.009575156502854565 RMSE: 0.6100286689166915 NRMSE: 0.19942746376693957 MAPE: 1336.3278344093537 Predictor: ElasticNet Pearson Correlation: 0.05174747566636725 Spearman Correlation: 0.07873234122650967 Coefficient of Determination: 0.002442568659393962 RMSE: 0.7682574571758598 NRMSE: 0.15111279645473247 MAPE: 436.76103639925304 Pearson Correlation: 0.21972783891735967 Spearman Correlation: 0.26859935909425303 Coefficient of Determination: 0.0046405049202843385 RMSE: 0.6115464714515952 NRMSE: 0.19992365603700518 MAPE: 1350.458783631987 Predictor: RandomForests Pearson Correlation: 0.28283871709746194 Spearman Correlation: 0.27248155031404964 Coefficient of Determination: 0.056911975463831976 RMSE: 0.7469885508843376 NRMSE: 0.14692929797095547 MAPE: 449.58995100093125 Pearson Correlation: 0.20590790949456775 Spearman Correlation: 0.1399556799237513 Coefficient of Determination: 0.026453487374958562 RMSE: 0.6048084295659103 NRMSE: 0.1977208897204584 MAPE: 1426.5538436896502 Protein: CCNE1 x_train_column_count: 1 x_train columns: ['CCNE1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.731155078102014 Spearman Correlation: 0.724580992574438 Coefficient of Determination: 0.5345877482343622 RMSE: 0.35640285844531305 NRMSE: 0.08601077743208076 MAPE: 77.48353179860717 Pearson Correlation: 0.6686208249928276 Spearman Correlation: 0.6712078704223245 Coefficient of Determination: 0.4364788914076564 RMSE: 0.27391475562733614 NRMSE: 0.1193164418814898 MAPE: 97.28225630852704 Predictor: ElasticNet Pearson Correlation: 0.731155078102014 Spearman Correlation: 0.724580992574438 Coefficient of Determination: 0.529375815932183 RMSE: 0.35839289634201255 NRMSE: 0.08649103369983652 MAPE: 79.85508250013564 Pearson Correlation: 0.6686208249928276 Spearman Correlation: 0.6712078704223245 Coefficient of Determination: 0.4457022094080316 RMSE: 0.27166388522554374 NRMSE: 0.11833596951933778 MAPE: 100.28697659723025 Predictor: RandomForests Pearson Correlation: 0.8620576959955392 Spearman Correlation: 0.7260197277689745 Coefficient of Determination: 0.7409729273935419 RMSE: 0.26588562094289714 NRMSE: 0.06416623330426845 MAPE: 55.85462183805717 Pearson Correlation: 0.7693889488812767 Spearman Correlation: 0.6683249776710507 Coefficient of Determination: 0.5225628425841873 RMSE: 0.25212646899839464 NRMSE: 0.10982552990303378 MAPE: 78.16212414126768 Protein: CCND1 x_train_column_count: 1 x_train columns: ['CCND1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.41041993626280215 Spearman Correlation: 0.40702588796834765 Coefficient of Determination: 0.16844452408196253 RMSE: 0.2231013144804463 NRMSE: 0.13412205845814423 MAPE: 532.0448309434951 Pearson Correlation: 0.3721019412428962 Spearman Correlation: 0.3490592152021846 Coefficient of Determination: 0.11233592807704806 RMSE: 0.197608097567355 NRMSE: 0.18724768325296826 MAPE: 345.7158784675023 Predictor: ElasticNet Pearson Correlation: 0.41041993626280215 Spearman Correlation: 0.40702588796834765 Coefficient of Determination: 0.16427487071655444 RMSE: 0.22365996146665226 NRMSE: 0.13445790087088785 MAPE: 545.4689758812548 Pearson Correlation: 0.3721019412428963 Spearman Correlation: 0.3490592152021846 Coefficient of Determination: 0.10339993018972804 RMSE: 0.19860025425351416 NRMSE: 0.1881878220589902 MAPE: 364.49366468960335 Predictor: RandomForests Pearson Correlation: 0.48699822442771834 Spearman Correlation: 0.43302356100040734 Coefficient of Determination: 0.2329800130729628 RMSE: 0.21426925304637665 NRMSE: 0.12881247853601416 MAPE: 532.0829627883396 Pearson Correlation: 0.3682241478957792 Spearman Correlation: 0.3545397794492318 Coefficient of Determination: 0.12538407752351843 RMSE: 0.19615035827191662 NRMSE: 0.18586637191391944 MAPE: 242.12255902019984 Protein: ERBB2 x_train_column_count: 1 x_train columns: ['ERBB2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 0.7576307424036323 Spearman Correlation: 0.6175542476381123 Coefficient of Determination: 0.5740043418350786 RMSE: 0.6404358362682986 NRMSE: 0.1091087851624953 MAPE: 320.71224730434784 Pearson Correlation: 0.7901604979795928 Spearman Correlation: 0.693151651706485 Coefficient of Determination: 0.6172623825300022 RMSE: 0.6598241207246932 NRMSE: 0.11902448241660532 MAPE: 141.84181243103447 Predictor: ElasticNet Pearson Correlation: 0.7576307424036323 Spearman Correlation: 0.6175542476381123 Coefficient of Determination: 0.5677794520989932 RMSE: 0.6450980717436423 NRMSE: 0.10990307370796502 MAPE: 343.104702446374 Pearson Correlation: 0.7901604979795928 Spearman Correlation: 0.693151651706485 Coefficient of Determination: 0.6242465958514785 RMSE: 0.6537761526235832 NRMSE: 0.11793350036503053 MAPE: 152.67425661390087 Predictor: RandomForests Pearson Correlation: 0.819999050484025 Spearman Correlation: 0.6221160255281639 Coefficient of Determination: 0.670233501848126 RMSE: 0.5634771446431789 NRMSE: 0.09599760543863893 MAPE: 549.6016379139868 Pearson Correlation: 0.8604407371645879 Spearman Correlation: 0.6851291397706071 Coefficient of Determination: 0.7380335646767575 RMSE: 0.5458840920255202 NRMSE: 0.09847104625613685 MAPE: 202.52741537438453 Protein: ERBB3 x_train_column_count: 1 x_train columns: ['ERBB3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.4118347805352837 Spearman Correlation: 0.4548855783210745 Coefficient of Determination: 0.1696078864585454 RMSE: 0.4109815959703826 NRMSE: 0.14902138098256357 MAPE: 205.93523004887479 Pearson Correlation: 0.39517943353034346 Spearman Correlation: 0.4259180289031036 Coefficient of Determination: 0.13282016833206411 RMSE: 0.4606972196012416 NRMSE: 0.12808708406234562 MAPE: 147.06597736539777 Predictor: ElasticNet Pearson Correlation: 0.4118347805352838 Spearman Correlation: 0.4548855783210745 Coefficient of Determination: 0.16668927692967994 RMSE: 0.41170320847955105 NRMSE: 0.14928303672020474 MAPE: 203.24784581622802 Pearson Correlation: 0.39517943353034346 Spearman Correlation: 0.4259180289031036 Coefficient of Determination: 0.12894589615891472 RMSE: 0.46172519398784073 NRMSE: 0.12837289052278883 MAPE: 140.94352484303514 Predictor: RandomForests Pearson Correlation: 0.4999772787130882 Spearman Correlation: 0.47145580278027005 Coefficient of Determination: 0.24936566604040078 RMSE: 0.39074639408774725 NRMSE: 0.14168412364895636 MAPE: 239.36369085083874 Pearson Correlation: 0.40632927276753494 Spearman Correlation: 0.4286995163716889 Coefficient of Determination: 0.13799826967697426 RMSE: 0.45931970330957334 NRMSE: 0.1277040948938829 MAPE: 166.28304846884032 Fold: 4 Protein: RB1 x_train_column_count: 1 x_train columns: ['RB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.20060321424304423 Spearman Correlation: 0.2604333098848863 Coefficient of Determination: 0.040241649564640825 RMSE: 0.2463982702627586 NRMSE: 0.09011054354255361 MAPE: 268.4274131355911 Pearson Correlation: 0.3029177651686274 Spearman Correlation: 0.3658524420503997 Coefficient of Determination: 0.0009212273884317002 RMSE: 0.16480638458270389 NRMSE: 0.15790287105996234 MAPE: 110.48529460613344 Predictor: ElasticNet Pearson Correlation: 0.20060321424304425 Spearman Correlation: 0.2604333098848863 Coefficient of Determination: 0.03739989858056081 RMSE: 0.24676278127989185 NRMSE: 0.09024384921002482 MAPE: 212.00340198872664 Pearson Correlation: 0.3029177651686273 Spearman Correlation: 0.3658524420503997 Coefficient of Determination: 0.0006857019454489244 RMSE: 0.16482580938203745 NRMSE: 0.1579214821810806 MAPE: 102.35926282834133 Predictor: RandomForests Pearson Correlation: 0.3354716659774619 Spearman Correlation: 0.36872499080973353 Coefficient of Determination: 0.09970165657844221 RMSE: 0.23864367620422963 NRMSE: 0.08727460364402781 MAPE: 320.1667713812272 Pearson Correlation: 0.2489237660453198 Spearman Correlation: 0.34152871277647523 Coefficient of Determination: -0.03633114959068817 RMSE: 0.16785081043222436 NRMSE: 0.16081977008414552 MAPE: 112.5832654307591 Protein: CDH1 x_train_column_count: 1 x_train columns: ['CDH1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 0.5112589407667545 Spearman Correlation: 0.6035344748233071 Coefficient of Determination: 0.2613857045139436 RMSE: 0.9617082199179806 NRMSE: 0.15313337472022873 MAPE: 736.7428771637664 Pearson Correlation: 0.467547599084504 Spearman Correlation: 0.44892080948640256 Coefficient of Determination: 0.18511913871768682 RMSE: 1.0529605857943893 NRMSE: 0.1910236540391113 MAPE: 375.52126774183415 Predictor: ElasticNet Pearson Correlation: 0.5112589407667545 Spearman Correlation: 0.6035344748233071 Coefficient of Determination: 0.25854506291752266 RMSE: 0.9635557652477411 NRMSE: 0.15342756046745978 MAPE: 705.7771379320666 Pearson Correlation: 0.467547599084504 Spearman Correlation: 0.44892080948640256 Coefficient of Determination: 0.1894127012254858 RMSE: 1.05018292637748 NRMSE: 0.19051974282092088 MAPE: 367.43852435178843 Predictor: RandomForests Pearson Correlation: 0.7087465928671025 Spearman Correlation: 0.6151147498515491 Coefficient of Determination: 0.5020692188726259 RMSE: 0.7896214925151644 NRMSE: 0.12573190225075068 MAPE: 347.50739803543973 Pearson Correlation: 0.7565120663505035 Spearman Correlation: 0.44363902379888376 Coefficient of Determination: 0.5235914114602802 RMSE: 0.8051093072939526 NRMSE: 0.1460595238369349 MAPE: 167.38169848454703 Protein: CDH2 x_train_column_count: 1 x_train columns: ['CDH2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.12726575412288094 Spearman Correlation: 0.07146547137499795 Coefficient of Determination: 0.016196572172465618 RMSE: 0.3762787992251089 NRMSE: 0.13634277818142942 MAPE: 647.0463099258228 Pearson Correlation: 0.20599048693772692 Spearman Correlation: -0.07145475629371938 Coefficient of Determination: -0.018662252249238565 RMSE: 0.3363624137974115 NRMSE: 0.17351864027351918 MAPE: 149.9789550533449 Predictor: ElasticNet Pearson Correlation: 0.12726575412288094 Spearman Correlation: 0.07146547137499795 Coefficient of Determination: 0.014844399422336396 RMSE: 0.3765372955966969 NRMSE: 0.13643644307438835 MAPE: 665.1421303189429 Pearson Correlation: 0.20599048693772687 Spearman Correlation: -0.07145475629371938 Coefficient of Determination: -0.023136305416066705 RMSE: 0.33710027098296363 NRMSE: 0.17389927725999937 MAPE: 151.66683021744882 Predictor: RandomForests Pearson Correlation: 0.20068017063291904 Spearman Correlation: 0.19591540058773488 Coefficient of Determination: 0.035911956927223376 RMSE: 0.37248941165378463 NRMSE: 0.13496971217254317 MAPE: 884.409767131594 Pearson Correlation: 0.13975849733951237 Spearman Correlation: -0.007879855739278996 Coefficient of Determination: -0.03649031714906359 RMSE: 0.33929306149406074 NRMSE: 0.1750304679408922 MAPE: 184.58079283105226 Protein: CDH3 x_train_column_count: 1 x_train columns: ['CDH3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.2585402732845947 Spearman Correlation: 0.3309265441567785 Coefficient of Determination: 0.06684307291007296 RMSE: 0.1989092319417179 NRMSE: 0.14176007521823758 MAPE: 172.4113743222495 Pearson Correlation: 0.4135532481751863 Spearman Correlation: 0.3220264591827829 Coefficient of Determination: 0.042540220994494726 RMSE: 0.20332831363960122 NRMSE: 0.18097113911351725 MAPE: 586.8030112709791 Predictor: ElasticNet Pearson Correlation: 0.2585402732845947 Spearman Correlation: 0.3309265441567785 Coefficient of Determination: 0.0628246488353148 RMSE: 0.19933705011951847 NRMSE: 0.14206497578254376 MAPE: 165.19569965309185 Pearson Correlation: 0.4135532481751863 Spearman Correlation: 0.3220264591827829 Coefficient of Determination: 0.015679514978452547 RMSE: 0.20616068609513216 NRMSE: 0.18349207513317917 MAPE: 491.046844980752 Predictor: RandomForests Pearson Correlation: 0.3661650806172687 Spearman Correlation: 0.35439273671084043 Coefficient of Determination: 0.13219300783029397 RMSE: 0.19181791710406904 NRMSE: 0.13670618548688587 MAPE: 233.9258036788603 Pearson Correlation: 0.3409632548764403 Spearman Correlation: 0.30228083799903893 Coefficient of Determination: 0.027424343098695014 RMSE: 0.20492704927339866 NRMSE: 0.18239408412108035 MAPE: 815.7562828804256 Protein: PTEN x_train_column_count: 1 x_train columns: ['PTEN'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 0.39770673577924787 Spearman Correlation: 0.4125541754874478 Coefficient of Determination: 0.15817064768418432 RMSE: 0.5154414074592557 NRMSE: 0.09970624563975079 MAPE: 259.1690741777357 Pearson Correlation: 0.4352330047258671 Spearman Correlation: 0.4688213069988404 Coefficient of Determination: 0.15805245626297648 RMSE: 0.6841191398264946 NRMSE: 0.10696882805511604 MAPE: 602.3780358417001 Predictor: ElasticNet Pearson Correlation: 0.39770673577924787 Spearman Correlation: 0.4125541754874478 Coefficient of Determination: 0.15593316353319042 RMSE: 0.5161259444527917 NRMSE: 0.0998386614927251 MAPE: 232.56749140641185 Pearson Correlation: 0.4352330047258671 Spearman Correlation: 0.4688213069988404 Coefficient of Determination: 0.1462873874679229 RMSE: 0.688882373666753 NRMSE: 0.10771360701536283 MAPE: 502.8216370519843 Predictor: RandomForests Pearson Correlation: 0.4480104956483391 Spearman Correlation: 0.4392262058963344 Coefficient of Determination: 0.19430775807159506 RMSE: 0.5042569155059734 NRMSE: 0.09754273357822141 MAPE: 267.30505802947863 Pearson Correlation: 0.436932308042635 Spearman Correlation: 0.47224052214471246 Coefficient of Determination: 0.1541849426458075 RMSE: 0.6856886013856142 NRMSE: 0.10721422897124762 MAPE: 505.4868401346051 Protein: BRCA2 x_train_column_count: 1 x_train columns: ['BRCA2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.02188802695411089 Spearman Correlation: 0.01572029885733223 Coefficient of Determination: 0.0004790857239438395 RMSE: 0.19175131820913427 NRMSE: 0.12353120838082414 MAPE: 111.961247159937 Pearson Correlation: -0.1789977926685888 Spearman Correlation: -0.15346076634372002 Coefficient of Determination: -0.006876659817144359 RMSE: 0.20882170225143312 NRMSE: 0.20287542358612384 MAPE: 141.83179502022946 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: RandomForests Pearson Correlation: 0.29756859130815233 Spearman Correlation: 0.22793522807235775 Coefficient of Determination: 0.0436784830702307 RMSE: 0.18756179440287882 NRMSE: 0.1208322077003568 MAPE: 118.66940252409964 Pearson Correlation: -0.019302508339210173 Spearman Correlation: -0.026935047913685145 Coefficient of Determination: -0.00923731427144081 RMSE: 0.20906635350900685 NRMSE: 0.20311310830459905 MAPE: 117.40974708408407 Protein: CDKN2A x_train_column_count: 1 x_train columns: ['CDKN2A'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.5089092587161527 Spearman Correlation: 0.5043429685491743 Coefficient of Determination: 0.25898863360702407 RMSE: 0.5801540740130321 NRMSE: 0.13115272386414198 MAPE: 151.69847511497272 Pearson Correlation: 0.5446033666939745 Spearman Correlation: 0.4884824000299256 Coefficient of Determination: 0.27768842431664753 RMSE: 0.5360041640704614 NRMSE: 0.1614956806479245 MAPE: 114.74866140595378 Predictor: ElasticNet Pearson Correlation: 0.5089092587161527 Spearman Correlation: 0.5043429685491743 Coefficient of Determination: 0.25613489503473175 RMSE: 0.5812701278289657 NRMSE: 0.13140502494155434 MAPE: 163.75058020176775 Pearson Correlation: 0.5446033666939745 Spearman Correlation: 0.4884824000299256 Coefficient of Determination: 0.26924794649510864 RMSE: 0.5391267717753642 NRMSE: 0.162436508519242 MAPE: 121.9144155211524 Predictor: RandomForests Pearson Correlation: 0.6315021316579708 Spearman Correlation: 0.5175085850702341 Coefficient of Determination: 0.39829848360987263 RMSE: 0.5227830094552866 NRMSE: 0.11818311505714627 MAPE: 286.8091880382585 Pearson Correlation: 0.6229828385819468 Spearman Correlation: 0.48235825210423916 Coefficient of Determination: 0.3606879562454919 RMSE: 0.5042690563417233 NRMSE: 0.1519340332454725 MAPE: 126.41263181421061 Protein: TP53 x_train_column_count: 1 x_train columns: ['TP53'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 0.33276518507002034 Spearman Correlation: 0.2833861559156332 Coefficient of Determination: 0.11073266839468499 RMSE: 0.4244667448515205 NRMSE: 0.10201075338897395 MAPE: 641.5008293378111 Pearson Correlation: 0.3834732257694103 Spearman Correlation: 0.31250015586229263 Coefficient of Determination: 0.13973962670370021 RMSE: 0.40050691650465914 NRMSE: 0.12709663509287228 MAPE: 193.43090409925915 Predictor: ElasticNet Pearson Correlation: 0.33276518507002045 Spearman Correlation: 0.2833861559156332 Coefficient of Determination: 0.10860022570952954 RMSE: 0.42497537087982173 NRMSE: 0.10213298987739047 MAPE: 592.298860550143 Pearson Correlation: 0.3834732257694103 Spearman Correlation: 0.31250015586229263 Coefficient of Determination: 0.13085307799861612 RMSE: 0.4025702336125746 NRMSE: 0.12775140696007062 MAPE: 191.7169112534483 Predictor: RandomForests Pearson Correlation: 0.4344928815774183 Spearman Correlation: 0.33659916441779625 Coefficient of Determination: 0.1871563068639337 RMSE: 0.40581773432610707 NRMSE: 0.09752889553619493 MAPE: 838.6185787542784 Pearson Correlation: 0.4387149159844563 Spearman Correlation: 0.25378423849339315 Coefficient of Determination: 0.18089051627022013 RMSE: 0.3908103335422206 NRMSE: 0.12401952701898343 MAPE: 229.84517702837385 Protein: CTNNB1 x_train_column_count: 1 x_train columns: ['CTNNB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.10830589448220494 Spearman Correlation: 0.13480386712524542 Coefficient of Determination: 0.0117301667795906 RMSE: 0.7072419451207151 NRMSE: 0.17081488385680496 MAPE: 573.4555778410326 Pearson Correlation: -0.09138017300424378 Spearman Correlation: 0.03373358770059477 Coefficient of Determination: -0.16797040045743095 RMSE: 0.8672338240312909 NRMSE: 0.1823298763836706 MAPE: 970.1379641339553 Predictor: ElasticNet Pearson Correlation: 0.10830589448220501 Spearman Correlation: 0.13480386712524542 Coefficient of Determination: 0.01127653538491935 RMSE: 0.7074042440857459 NRMSE: 0.1708540827180335 MAPE: 584.8517500645364 Pearson Correlation: -0.09138017300424384 Spearman Correlation: 0.03373358770059477 Coefficient of Determination: -0.16345293088314627 RMSE: 0.8655550580398204 NRMSE: 0.18197692751657144 MAPE: 962.2956945388241 Predictor: RandomForests Pearson Correlation: 0.27073272495551043 Spearman Correlation: 0.25332746502304954 Coefficient of Determination: 0.05488063472280302 RMSE: 0.6916295995789115 NRMSE: 0.16704415022193786 MAPE: 598.8045248717256 Pearson Correlation: 0.07267382808851819 Spearman Correlation: 0.13823949839064295 Coefficient of Determination: -0.133416084696651 RMSE: 0.8543089877843627 NRMSE: 0.17961251950726656 MAPE: 916.3275962998433 Protein: CCNE1 x_train_column_count: 1 x_train columns: ['CCNE1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.7284659471489124 Spearman Correlation: 0.7105645817584747 Coefficient of Determination: 0.5306626361555623 RMSE: 0.345832377321277 NRMSE: 0.08345980098010883 MAPE: 76.12495494477345 Pearson Correlation: 0.8235508887291155 Spearman Correlation: 0.7249192633324606 Coefficient of Determination: 0.47728890438008065 RMSE: 0.32685706405279036 NRMSE: 0.13337838245849604 MAPE: 111.11211553521782 Predictor: ElasticNet Pearson Correlation: 0.7284659471489124 Spearman Correlation: 0.7105645817584747 Coefficient of Determination: 0.5259797603572383 RMSE: 0.3475533892772843 NRMSE: 0.08387513316052907 MAPE: 78.18876483857412 Pearson Correlation: 0.8235508887291155 Spearman Correlation: 0.7249192633324606 Coefficient of Determination: 0.44376774097369276 RMSE: 0.33717479499268926 NRMSE: 0.13758867011861964 MAPE: 113.97274513138382 Predictor: RandomForests Pearson Correlation: 0.8558319038801104 Spearman Correlation: 0.7158571558170889 Coefficient of Determination: 0.7288377951807345 RMSE: 0.26286796528567175 NRMSE: 0.06343798182437718 MAPE: 55.5244048092431 Pearson Correlation: 0.8456838474620257 Spearman Correlation: 0.7088274541368929 Coefficient of Determination: 0.7022821756292825 RMSE: 0.24667744086523613 NRMSE: 0.10066001830785773 MAPE: 69.87901290517232 Protein: CCND1 x_train_column_count: 1 x_train columns: ['CCND1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 0.3660328383185607 Spearman Correlation: 0.3728160125831736 Coefficient of Determination: 0.13398003872754172 RMSE: 0.22363030380370164 NRMSE: 0.14287467819456795 MAPE: 537.6675814363354 Pearson Correlation: 0.6012892043958128 Spearman Correlation: 0.49870696642102774 Coefficient of Determination: 0.2634898198839728 RMSE: 0.19652978093467904 NRMSE: 0.12394663277918709 MAPE: 467.70418773534414 Predictor: ElasticNet Pearson Correlation: 0.3660328383185607 Spearman Correlation: 0.3728160125831736 Coefficient of Determination: 0.1298037859493535 RMSE: 0.2241688672798259 NRMSE: 0.1432187598419557 MAPE: 553.4164032365017 Pearson Correlation: 0.6012892043958129 Spearman Correlation: 0.49870696642102774 Coefficient of Determination: 0.2290437834431409 RMSE: 0.20107304293655576 NRMSE: 0.1268119594705826 MAPE: 470.1670883042029 Predictor: RandomForests Pearson Correlation: 0.4536960474814516 Spearman Correlation: 0.39958941232777434 Coefficient of Determination: 0.2019813527443235 RMSE: 0.2146709224136968 NRMSE: 0.1371506385132421 MAPE: 504.6727797801616 Pearson Correlation: 0.5244663896500242 Spearman Correlation: 0.5018856606099847 Coefficient of Determination: 0.2568204270681399 RMSE: 0.1974176032612837 NRMSE: 0.12450656108809517 MAPE: 425.3854561538555 Protein: ERBB2 x_train_column_count: 1 x_train columns: ['ERBB2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 0.7679926094943189 Spearman Correlation: 0.6238582415521245 Coefficient of Determination: 0.589812648237893 RMSE: 0.6281778902672617 NRMSE: 0.10702044231685805 MAPE: 245.32123041369837 Pearson Correlation: 0.7633533110364072 Spearman Correlation: 0.67230847305938 Coefficient of Determination: 0.5282240041870256 RMSE: 0.7120439365596681 NRMSE: 0.12821765703166854 MAPE: 138.24387579417413 Predictor: ElasticNet Pearson Correlation: 0.7679926094943189 Spearman Correlation: 0.6238582415521245 Coefficient of Determination: 0.5840598813714064 RMSE: 0.6325675655113283 NRMSE: 0.10776829574106485 MAPE: 267.58185132343596 Pearson Correlation: 0.7633533110364075 Spearman Correlation: 0.67230847305938 Coefficient of Determination: 0.5268749073632553 RMSE: 0.7130612948549206 NRMSE: 0.12840085260469633 MAPE: 130.52380722523606 Predictor: RandomForests Pearson Correlation: 0.837912110164944 Spearman Correlation: 0.6242468308358713 Coefficient of Determination: 0.7012149842957249 RMSE: 0.5361310018094477 NRMSE: 0.09133873993721106 MAPE: 438.3412943231485 Pearson Correlation: 0.7903040042412042 Spearman Correlation: 0.6588300179349611 Coefficient of Determination: 0.5700413694558568 RMSE: 0.6797546826519252 NRMSE: 0.12240333537147066 MAPE: 216.94371412894742 Protein: ERBB3 x_train_column_count: 1 x_train columns: ['ERBB3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.4247436800277297 Spearman Correlation: 0.47559620013365334 Coefficient of Determination: 0.18040719372349834 RMSE: 0.4324826739468878 NRMSE: 0.1182554567706047 MAPE: 212.58794848982294 Pearson Correlation: 0.32037558123944115 Spearman Correlation: 0.3203655905933989 Coefficient of Determination: 0.05473559454273058 RMSE: 0.373907581665535 NRMSE: 0.18403952495510342 MAPE: 193.7212746310581 Predictor: ElasticNet Pearson Correlation: 0.4247436800277297 Spearman Correlation: 0.47559620013365334 Coefficient of Determination: 0.1774763357234298 RMSE: 0.4332552613424271 NRMSE: 0.11846670841340677 MAPE: 209.51300926112899 Pearson Correlation: 0.3203755812394411 Spearman Correlation: 0.3203655905933989 Coefficient of Determination: 0.07822509935332034 RMSE: 0.369232616863482 NRMSE: 0.1817384796071616 MAPE: 186.2955799530054 Predictor: RandomForests Pearson Correlation: 0.5017575914848379 Spearman Correlation: 0.4921605147487151 Coefficient of Determination: 0.2503000193256526 RMSE: 0.41363129949439237 NRMSE: 0.11310085051484675 MAPE: 238.28030543478857 Pearson Correlation: 0.4041323955475392 Spearman Correlation: 0.32032765592468015 Coefficient of Determination: 0.13857368373267354 RMSE: 0.3569412060034264 NRMSE: 0.1756885744256825 MAPE: 237.4408613379951 Fold: 5 Protein: RB1 x_train_column_count: 1 x_train columns: ['RB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.19578397808916828 Spearman Correlation: 0.27154453701595577 Coefficient of Determination: 0.03833136607641996 RMSE: 0.2293783103983448 NRMSE: 0.11331632788682353 MAPE: 190.66146768633737 Pearson Correlation: 0.22446261577437426 Spearman Correlation: 0.28244990585917534 Coefficient of Determination: -0.04417148888267097 RMSE: 0.24562089024830072 NRMSE: 0.12384329823140024 MAPE: 394.3427181483698 Predictor: ElasticNet Pearson Correlation: 0.1957839780891683 Spearman Correlation: 0.27154453701595577 Coefficient of Determination: 0.03534813631583633 RMSE: 0.22973381660399553 NRMSE: 0.11349195328791467 MAPE: 160.26534077226154 Pearson Correlation: 0.22446261577437424 Spearman Correlation: 0.28244990585917534 Coefficient of Determination: -0.05727768553947543 RMSE: 0.24715757129406746 NRMSE: 0.12461810060608851 MAPE: 300.07055152820527 Predictor: RandomForests Pearson Correlation: 0.3145025462633167 Spearman Correlation: 0.35956151450924767 Coefficient of Determination: 0.09132386711635232 RMSE: 0.22296884509436773 NRMSE: 0.11014995583227584 MAPE: 211.2056067728131 Pearson Correlation: 0.21123097353652284 Spearman Correlation: 0.23779555867019272 Coefficient of Determination: -0.04878630534383244 RMSE: 0.24616306445127475 NRMSE: 0.12411666521351812 MAPE: 529.0921149732138 Protein: CDH1 x_train_column_count: 1 x_train columns: ['CDH1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.5196914427945497 Spearman Correlation: 0.5889053256204806 Coefficient of Determination: 0.2700791957138807 RMSE: 0.9620648244803076 NRMSE: 0.15319015707784903 MAPE: 328.0617854244585 Pearson Correlation: 0.43507394591186765 Spearman Correlation: 0.5418695993715633 Coefficient of Determination: 0.18623570683890045 RMSE: 1.0479997207832101 NRMSE: 0.2060922539936698 MAPE: 1775.0378417218947 Predictor: ElasticNet Pearson Correlation: 0.5196914427945498 Spearman Correlation: 0.5889053256204806 Coefficient of Determination: 0.26778658703229286 RMSE: 0.9635745149480467 NRMSE: 0.1534305459934471 MAPE: 313.0530255897552 Pearson Correlation: 0.4350739459118676 Spearman Correlation: 0.5418695993715633 Coefficient of Determination: 0.18103958666796915 RMSE: 1.0513402871807378 NRMSE: 0.2067491862855672 MAPE: 1706.2019323291058 Predictor: RandomForests Pearson Correlation: 0.7477132730675663 Spearman Correlation: 0.5990881223566048 Coefficient of Determination: 0.5587490298670774 RMSE: 0.7480132684931943 NRMSE: 0.11910659986834722 MAPE: 166.2197926101653 Pearson Correlation: 0.616013622220581 Spearman Correlation: 0.5412740364706119 Coefficient of Determination: 0.3622554955236724 RMSE: 0.9277590822668783 NRMSE: 0.1824465757343766 MAPE: 665.3142844496236 Protein: CDH2 x_train_column_count: 1 x_train columns: ['CDH2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.13776475523400486 Spearman Correlation: 0.07886292148061753 Coefficient of Determination: 0.018979127784685246 RMSE: 0.35571203306038285 NRMSE: 0.17470263398673092 MAPE: 224.04769634015378 Pearson Correlation: 0.15378835582174144 Spearman Correlation: -0.1015076266632875 Coefficient of Determination: 0.0039633951866197 RMSE: 0.41626420394603847 NRMSE: 0.15566224929268682 MAPE: 221.01005293528274 Predictor: ElasticNet Pearson Correlation: 0.13776475523400486 Spearman Correlation: 0.07886292148061753 Coefficient of Determination: 0.016572710910836785 RMSE: 0.3561480416993742 NRMSE: 0.1749167730953166 MAPE: 213.01924247460425 Pearson Correlation: 0.1537883558217415 Spearman Correlation: -0.1015076266632875 Coefficient of Determination: 0.010891144896671756 RMSE: 0.4148140533645954 NRMSE: 0.15511996461103356 MAPE: 354.29572101398924 Predictor: RandomForests Pearson Correlation: 0.2225680543160313 Spearman Correlation: 0.23310447235810897 Coefficient of Determination: 0.04505475310564411 RMSE: 0.3509527652907008 NRMSE: 0.17236519094872588 MAPE: 516.3906532757959 Pearson Correlation: 0.02613563430060784 Spearman Correlation: 0.01272366311076386 Coefficient of Determination: -0.02965335260008506 RMSE: 0.42323047837424443 NRMSE: 0.15826729180272028 MAPE: 421.1178441241013 Protein: CDH3 x_train_column_count: 1 x_train columns: ['CDH3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.29131399778415096 Spearman Correlation: 0.34098087037844793 Coefficient of Determination: 0.08486384530498425 RMSE: 0.19492986872803375 NRMSE: 0.13675834085987662 MAPE: 331.7978221036521 Pearson Correlation: 0.26529223317972783 Spearman Correlation: 0.2942804773126847 Coefficient of Determination: 0.06608133810210592 RMSE: 0.21588497653392935 NRMSE: 0.19477347913092807 MAPE: 122.65484835645208 Predictor: ElasticNet Pearson Correlation: 0.29131399778415096 Spearman Correlation: 0.34098087037844793 Coefficient of Determination: 0.08010585958911676 RMSE: 0.19543595250443696 NRMSE: 0.13711339767107045 MAPE: 271.95720419899686 Pearson Correlation: 0.2652922331797278 Spearman Correlation: 0.2942804773126847 Coefficient of Determination: 0.0614257258099673 RMSE: 0.21642240410627353 NRMSE: 0.19525835139822043 MAPE: 112.22529313241331 Predictor: RandomForests Pearson Correlation: 0.3697002386602205 Spearman Correlation: 0.3702285475555668 Coefficient of Determination: 0.13532228695214488 RMSE: 0.18947969027848924 NRMSE: 0.13293462022119973 MAPE: 428.8692666441503 Pearson Correlation: 0.33392383751857757 Spearman Correlation: 0.2896321859679133 Coefficient of Determination: 0.1080813307623334 RMSE: 0.21097476953916952 NRMSE: 0.190343443678822 MAPE: 147.6576392773054 Protein: PTEN x_train_column_count: 1 x_train columns: ['PTEN'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 0.39159398246227695 Spearman Correlation: 0.4204847775371454 Coefficient of Determination: 0.15334584710066612 RMSE: 0.5235839613948132 NRMSE: 0.0818675570940213 MAPE: 374.00165793823516 Pearson Correlation: 0.4182159878231952 Spearman Correlation: 0.428546490604621 Coefficient of Determination: 0.17098186795904924 RMSE: 0.657115104950897 NRMSE: 0.12711140222665138 MAPE: 260.87198654659664 Predictor: ElasticNet Pearson Correlation: 0.39159398246227695 Spearman Correlation: 0.4204847775371454 Coefficient of Determination: 0.15060262447566497 RMSE: 0.5244315009771283 NRMSE: 0.08200007833275401 MAPE: 312.2232305530076 Pearson Correlation: 0.4182159878231952 Spearman Correlation: 0.428546490604621 Coefficient of Determination: 0.16452758057558892 RMSE: 0.6596681171254725 NRMSE: 0.12760525323535138 MAPE: 254.2436860438043 Predictor: RandomForests Pearson Correlation: 0.4424713683162719 Spearman Correlation: 0.4429013674143712 Coefficient of Determination: 0.19271961505571344 RMSE: 0.5112643528819989 NRMSE: 0.07994126383894909 MAPE: 489.48198787226653 Pearson Correlation: 0.41212981082810396 Spearman Correlation: 0.4375929794326208 Coefficient of Determination: 0.16319084645398674 RMSE: 0.6601956321145211 NRMSE: 0.12770729497727507 MAPE: 405.69028821943914 Protein: BRCA2 x_train_column_count: 1 x_train columns: ['BRCA2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.0425768835717066 Spearman Correlation: 0.04263289576165543 Coefficient of Determination: 0.001812791014678683 RMSE: 0.2002864149428469 NRMSE: 0.12902974066216583 MAPE: 117.45509124942066 Pearson Correlation: -0.055947461482781444 Spearman Correlation: -0.039903240688786645 Coefficient of Determination: -0.10801167417699364 RMSE: 0.1748273035203661 NRMSE: 0.2286370280786845 MAPE: 113.25969022667685 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: RandomForests Pearson Correlation: 0.28059584900533835 Spearman Correlation: 0.22582466256683859 Coefficient of Determination: 0.04202793746016242 RMSE: 0.1962103509783002 NRMSE: 0.1264038337756806 MAPE: 124.03279629118732 Pearson Correlation: -0.08084835885705399 Spearman Correlation: -0.009163349322339706 Coefficient of Determination: -0.11690642357710335 RMSE: 0.1755276285743108 NRMSE: 0.22955290469405715 MAPE: 121.66442003308069 Protein: CDKN2A x_train_column_count: 1 x_train columns: ['CDKN2A'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 0.562261597610525 Spearman Correlation: 0.543492990453 Coefficient of Determination: 0.31613810414753984 RMSE: 0.5620739578150543 NRMSE: 0.14312697863946788 MAPE: 133.395167504575 Pearson Correlation: 0.31254093595626364 Spearman Correlation: 0.30912355515654816 Coefficient of Determination: -0.03429059623845143 RMSE: 0.6162510956633007 NRMSE: 0.15506683165076388 MAPE: 231.46523896428158 Predictor: ElasticNet Pearson Correlation: 0.5622615976105251 Spearman Correlation: 0.543492990453 Coefficient of Determination: 0.3124045594789232 RMSE: 0.5636061910072524 NRMSE: 0.1435171477699199 MAPE: 146.77516383719777 Pearson Correlation: 0.3125409359562636 Spearman Correlation: 0.30912355515654816 Coefficient of Determination: 0.012731701086985403 RMSE: 0.6020797386144108 NRMSE: 0.15150090300053112 MAPE: 235.0605076901894 Predictor: RandomForests Pearson Correlation: 0.6804985222571751 Spearman Correlation: 0.5578792484186119 Coefficient of Determination: 0.4625852388380224 RMSE: 0.4982692159571973 NRMSE: 0.12687968627159923 MAPE: 263.8935646704191 Pearson Correlation: 0.3800441671847586 Spearman Correlation: 0.31043525603050665 Coefficient of Determination: -0.060342568086227955 RMSE: 0.6239639730831126 NRMSE: 0.15700761759470386 MAPE: 482.2917517452506 Protein: TP53 x_train_column_count: 1 x_train columns: ['TP53'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.3443683500812169 Spearman Correlation: 0.28111369193441366 Coefficient of Determination: 0.11858956053765946 RMSE: 0.3978714775463095 NRMSE: 0.10119064003314163 MAPE: 660.717149610732 Pearson Correlation: 0.3493911871342031 Spearman Correlation: 0.3358321176074515 Coefficient of Determination: 0.10873883694515474 RMSE: 0.4986046379620052 NRMSE: 0.13354885173751313 MAPE: 164.10322763570392 Predictor: ElasticNet Pearson Correlation: 0.3443683500812169 Spearman Correlation: 0.28111369193441366 Coefficient of Determination: 0.11621041251640629 RMSE: 0.3984080931696039 NRMSE: 0.10132711746728144 MAPE: 612.8304060188236 Pearson Correlation: 0.349391187134203 Spearman Correlation: 0.3358321176074515 Coefficient of Determination: 0.10074708590319581 RMSE: 0.5008350904822315 NRMSE: 0.1341462677065037 MAPE: 158.7556541684666 Predictor: RandomForests Pearson Correlation: 0.4315333097262984 Spearman Correlation: 0.34636829091320603 Coefficient of Determination: 0.18530224267891005 RMSE: 0.38251808431714207 NRMSE: 0.09728581202908063 MAPE: 844.9566421003476 Pearson Correlation: 0.43923064667351636 Spearman Correlation: 0.307609706668647 Coefficient of Determination: 0.17124734532602126 RMSE: 0.48080202597385313 NRMSE: 0.12878050782746836 MAPE: 184.65594885123437 Protein: CTNNB1 x_train_column_count: 1 x_train columns: ['CTNNB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.0518271737217569 Spearman Correlation: 0.07808903558350536 Coefficient of Determination: 0.0026860559359851433 RMSE: 0.754964808220002 NRMSE: 0.1484981920180964 MAPE: 681.5629059451327 Pearson Correlation: 0.16859534211479751 Spearman Correlation: 0.23237945610294397 Coefficient of Determination: 0.01568558602311365 RMSE: 0.6723219959141442 NRMSE: 0.21532287635886105 MAPE: 272.72583953479506 Predictor: ElasticNet Pearson Correlation: 0.05182717372175692 Spearman Correlation: 0.07808903558350536 Coefficient of Determination: 0.0024178571399613435 RMSE: 0.7550663143920597 NRMSE: 0.1485181578269197 MAPE: 688.5435887068597 Pearson Correlation: 0.1685953421147975 Spearman Correlation: 0.23237945610294397 Coefficient of Determination: 0.011409098294075548 RMSE: 0.6737809101549757 NRMSE: 0.21579011915711221 MAPE: 271.7943097824159 Predictor: RandomForests Pearson Correlation: 0.2709132651209278 Spearman Correlation: 0.26370850559812414 Coefficient of Determination: 0.053288494500083106 RMSE: 0.7355625165488577 NRMSE: 0.14468184825902003 MAPE: 720.5866044879414 Pearson Correlation: 0.21966619098758053 Spearman Correlation: 0.2606286481137723 Coefficient of Determination: 0.03927354356881818 RMSE: 0.6642174375171072 NRMSE: 0.212727249804511 MAPE: 272.48748832271815 Protein: CCNE1 x_train_column_count: 1 x_train columns: ['CCNE1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.7385943192541282 Spearman Correlation: 0.7126097756485593 Coefficient of Determination: 0.5455215684344692 RMSE: 0.30255393165396605 NRMSE: 0.10776631581619449 MAPE: 69.0391769912328 Pearson Correlation: 0.7813741840172372 Spearman Correlation: 0.719053853539321 Coefficient of Determination: 0.251322082607635 RMSE: 0.5607727755966646 NRMSE: 0.135331412891055 MAPE: 91.41153464276908 Predictor: ElasticNet Pearson Correlation: 0.7385943192541282 Spearman Correlation: 0.7126097756485593 Coefficient of Determination: 0.5224199772167151 RMSE: 0.3101481808065943 NRMSE: 0.11047130215729092 MAPE: 74.62358650338751 Pearson Correlation: 0.7813741840172373 Spearman Correlation: 0.719053853539321 Coefficient of Determination: 0.5100047894439756 RMSE: 0.4536650544034919 NRMSE: 0.10948308381482538 MAPE: 93.60470897731477 Predictor: RandomForests Pearson Correlation: 0.8556441900853572 Spearman Correlation: 0.7114927920105991 Coefficient of Determination: 0.7307222498598404 RMSE: 0.23288761708519015 NRMSE: 0.08295195621912382 MAPE: 56.512948131727114 Pearson Correlation: 0.8005340807679645 Spearman Correlation: 0.7307358786224182 Coefficient of Determination: 0.6136504949478718 RMSE: 0.4028372194679773 NRMSE: 0.09721679162776681 MAPE: 78.43246041847577 Protein: CCND1 x_train_column_count: 1 x_train columns: ['CCND1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.41451772860371755 Spearman Correlation: 0.42726285187649277 Coefficient of Determination: 0.17182494732678522 RMSE: 0.2071424658065258 NRMSE: 0.13046864973201514 MAPE: 584.9069938579769 Pearson Correlation: 0.3589927185764491 Spearman Correlation: 0.2762503273108144 Coefficient of Determination: 0.12633820729729517 RMSE: 0.2579384860996859 NRMSE: 0.1647937581296469 MAPE: 243.89682158790058 Predictor: ElasticNet Pearson Correlation: 0.4145177286037175 Spearman Correlation: 0.42726285187649277 Coefficient of Determination: 0.16633345117160447 RMSE: 0.2078280953695484 NRMSE: 0.1309004934051877 MAPE: 602.8530011397819 Pearson Correlation: 0.358992718576449 Spearman Correlation: 0.2762503273108144 Coefficient of Determination: 0.11962893615373504 RMSE: 0.25892700904073 NRMSE: 0.16542531340049962 MAPE: 247.93905572867408 Predictor: RandomForests Pearson Correlation: 0.491338635402475 Spearman Correlation: 0.4512173853537595 Coefficient of Determination: 0.23817352746790288 RMSE: 0.19867174193036233 NRMSE: 0.12513336562176405 MAPE: 544.3909708292624 Pearson Correlation: 0.39141166085500984 Spearman Correlation: 0.2942353603372814 Coefficient of Determination: 0.15022210570379357 RMSE: 0.25438833306784453 NRMSE: 0.16252560858399748 MAPE: 251.6905399030386 Protein: ERBB2 x_train_column_count: 1 x_train columns: ['ERBB2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.7776877249625478 Spearman Correlation: 0.6442627066647334 Coefficient of Determination: 0.6047981975574235 RMSE: 0.6462029190492304 NRMSE: 0.11009130263032701 MAPE: 306.01343460200195 Pearson Correlation: 0.6819514367848012 Spearman Correlation: 0.5872666741480568 Coefficient of Determination: 0.46429713939097983 RMSE: 0.6350994407726499 NRMSE: 0.14052427055485117 MAPE: 204.89012646095063 Predictor: ElasticNet Pearson Correlation: 0.7776877249625477 Spearman Correlation: 0.6442627066647334 Coefficient of Determination: 0.6001419146373868 RMSE: 0.6499985655657075 NRMSE: 0.1107379534841146 MAPE: 327.91410907717255 Pearson Correlation: 0.6819514367848014 Spearman Correlation: 0.5872666741480568 Coefficient of Determination: 0.4636712116745767 RMSE: 0.6354703649545989 NRMSE: 0.1406063425057194 MAPE: 224.93544994707904 Predictor: RandomForests Pearson Correlation: 0.838022725420146 Spearman Correlation: 0.6476716327438983 Coefficient of Determination: 0.7007492231903293 RMSE: 0.5623116746672499 NRMSE: 0.09579904844664121 MAPE: 556.9708624977075 Pearson Correlation: 0.7751002688381805 Spearman Correlation: 0.5803322760177033 Coefficient of Determination: 0.5949869104508938 RMSE: 0.552222728245644 NRMSE: 0.12218668619219915 MAPE: 295.855146905497 Protein: ERBB3 x_train_column_count: 1 x_train columns: ['ERBB3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.37738843632489 Spearman Correlation: 0.41142820549776254 Coefficient of Determination: 0.14242203187174562 RMSE: 0.43423667161575774 NRMSE: 0.11718801437220049 MAPE: 211.57021337384987 Pearson Correlation: 0.5207896565156246 Spearman Correlation: 0.5619845633985462 Coefficient of Determination: 0.23145517366475377 RMSE: 0.36554330866185836 NRMSE: 0.17686096101384643 MAPE: 189.66787865486225 Predictor: ElasticNet Pearson Correlation: 0.3773884363248901 Spearman Correlation: 0.41142820549776254 Coefficient of Determination: 0.1400195994958402 RMSE: 0.43484448494169253 NRMSE: 0.11735204574364184 MAPE: 213.86210719531533 Pearson Correlation: 0.5207896565156246 Spearman Correlation: 0.5619845633985462 Coefficient of Determination: 0.21030082931297134 RMSE: 0.37053998343927513 NRMSE: 0.17927850411220758 MAPE: 193.6591646657521 Predictor: RandomForests Pearson Correlation: 0.46247361973981643 Spearman Correlation: 0.42563267771628494 Coefficient of Determination: 0.21289293377250285 RMSE: 0.41601270604680346 NRMSE: 0.1122698891225144 MAPE: 251.7081601814871 Pearson Correlation: 0.54545299417486 Spearman Correlation: 0.5588239281487987 Coefficient of Determination: 0.26905084709705074 RMSE: 0.3564903845876662 NRMSE: 0.172480881242702 MAPE: 218.39049140103648
Min-Max
scenario = Scenario.selfmRNA
normalizeTechnique = NormalizeTechnique.MinMax
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.266811 | 0.102965 | 0.232299 | 0.000000 | 0.0 | 0.00000 | 0.165596 | 0.256402 | 0.0 | 0.00000 | ... | 0.362558 | 0.154626 | 0.343226 | 0.136973 | 0.283236 | 0.203583 | 0.106969 | 0.050188 | 0.019658 | 0.021305 |
| TCGA-A1-A0SH-01 | 0.074647 | 0.046655 | 0.060467 | 0.000000 | 0.0 | 0.00000 | 0.019946 | 0.108076 | 0.0 | 0.00000 | ... | 0.437102 | 0.171136 | 0.196632 | 0.028737 | 0.498917 | 0.208787 | 0.168174 | 0.119445 | 0.172767 | 0.000000 |
| TCGA-A1-A0SJ-01 | 0.122769 | 0.097168 | 0.035285 | 0.088368 | 0.0 | 0.00000 | 0.020200 | 0.129369 | 0.0 | 0.29443 | ... | 0.415293 | 0.914898 | 0.215818 | 0.074090 | 0.379839 | 0.104565 | 0.110857 | 0.079787 | 0.016343 | 0.000000 |
| TCGA-A1-A0SK-01 | 0.716855 | 1.000000 | 0.116251 | 0.076144 | 0.0 | 0.01449 | 0.000000 | 0.094313 | 0.0 | 0.00000 | ... | 0.334733 | 0.181185 | 0.763246 | 0.229344 | 0.511470 | 0.000000 | 0.246798 | 0.166438 | 0.018601 | 0.000000 |
| TCGA-A1-A0SQ-01 | 0.025757 | 0.011574 | 0.044865 | 0.000000 | 0.0 | 0.00000 | 0.022276 | 0.153652 | 0.0 | 0.00000 | ... | 0.537294 | 0.183640 | 0.239462 | 0.036770 | 0.323545 | 0.099038 | 0.071604 | 0.075950 | 0.006561 | 0.000000 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 1 x_train columns: ['RB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.19391279737668235 Spearman Correlation: 0.25847504910702246 Coefficient of Determination: 0.03760217298645041 RMSE: 0.21984820246432932 NRMSE: 0.08326006531502719 MAPE: 189.5806120258704 Pearson Correlation: 0.2796279815287011 Spearman Correlation: 0.34967808018729885 Coefficient of Determination: 0.021262301857832844 RMSE: 0.27746855186879554 NRMSE: 0.13707362892003158 MAPE: 131.61247132621608 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: RandomForests Pearson Correlation: 0.338356626817481 Spearman Correlation: 0.33951132296467335 Coefficient of Determination: 0.0980294642022066 RMSE: 0.2128343775533181 NRMSE: 0.08060381653221665 MAPE: 145.37698710976034 Pearson Correlation: 0.27053666597285697 Spearman Correlation: 0.3280678885109722 Coefficient of Determination: 0.025911503927463886 RMSE: 0.27680875151246914 NRMSE: 0.1367476776416065 MAPE: 107.54919913765022 Protein: CDH1 x_train_column_count: 1 x_train columns: ['CDH1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 0.5012433342985567 Spearman Correlation: 0.5636647709924965 Coefficient of Determination: 0.2512448801787346 RMSE: 0.9764389700758118 NRMSE: 0.164126698952114 MAPE: 691.994300358787 Pearson Correlation: 0.5235921917169751 Spearman Correlation: 0.6555360452638768 Coefficient of Determination: 0.2657837208609375 RMSE: 0.9942240983612216 NRMSE: 0.16102881318409212 MAPE: 377.3829911994233 Predictor: ElasticNet Pearson Correlation: 0.5012433342985567 Spearman Correlation: 0.5636647709924965 Coefficient of Determination: 0.06328804920482389 RMSE: 1.092139794850482 NRMSE: 0.18357450369799508 MAPE: 503.2052358196695 Pearson Correlation: 0.5235921917169751 Spearman Correlation: 0.6555360452638768 Coefficient of Determination: 0.07822244408812518 RMSE: 1.1140003966364955 NRMSE: 0.1804282978582643 MAPE: 299.31130368709375 Predictor: RandomForests Pearson Correlation: 0.7132134998444969 Spearman Correlation: 0.5781801023015845 Coefficient of Determination: 0.5084673634826771 RMSE: 0.7911364260120465 NRMSE: 0.13297974988856612 MAPE: 306.3488021625489 Pearson Correlation: 0.7364529516243186 Spearman Correlation: 0.6543510118962805 Coefficient of Determination: 0.5391808694107084 RMSE: 0.7876577143766689 NRMSE: 0.12757243276483898 MAPE: 153.68920103222936 Protein: CDH2 x_train_column_count: 1 x_train columns: ['CDH2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.15002477351668803 Spearman Correlation: 0.021027718948557195 Coefficient of Determination: 0.02250743266873345 RMSE: 0.366993371962299 NRMSE: 0.1355784991382294 MAPE: 373.67876553512673 Pearson Correlation: 0.10564670001853975 Spearman Correlation: 0.11871524729294705 Coefficient of Determination: 0.008640461878668515 RMSE: 0.3734908911193236 NRMSE: 0.19274959545818424 MAPE: 104.18723456874639 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: RandomForests Pearson Correlation: 0.19331701961991646 Spearman Correlation: 0.1288920303560814 Coefficient of Determination: 0.03662847645748135 RMSE: 0.36433290051662137 NRMSE: 0.1345956401735663 MAPE: 517.4362375376886 Pearson Correlation: 0.044230558158288136 Spearman Correlation: -0.05978684567685635 Coefficient of Determination: -0.006409334490806495 RMSE: 0.3763151890353155 NRMSE: 0.19420714715142465 MAPE: 98.36754929438122 Protein: CDH3 x_train_column_count: 1 x_train columns: ['CDH3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.24821600086503434 Spearman Correlation: 0.3061115403229242 Coefficient of Determination: 0.061611183085430676 RMSE: 0.2022653234074646 NRMSE: 0.14190472821425085 MAPE: 292.62603577001636 Pearson Correlation: 0.4229275133140767 Spearman Correlation: 0.4640717978733782 Coefficient of Determination: 0.1621738842271332 RMSE: 0.187257270741668 NRMSE: 0.14332632030498657 MAPE: 198.45611925540754 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: RandomForests Pearson Correlation: 0.3496682668189332 Spearman Correlation: 0.3307097672586625 Coefficient of Determination: 0.12015906260707776 RMSE: 0.19585384588255172 NRMSE: 0.13740658211437934 MAPE: 381.1612404025096 Pearson Correlation: 0.4456557812474688 Spearman Correlation: 0.4605862331967038 Coefficient of Determination: 0.17847992914693533 RMSE: 0.1854260861696705 NRMSE: 0.14192473549354423 MAPE: 326.56281030401266 Protein: PTEN x_train_column_count: 1 x_train columns: ['PTEN'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 0.40237188375210986 Spearman Correlation: 0.4288996648292669 Coefficient of Determination: 0.1619031328342213 RMSE: 0.5735222164263055 NRMSE: 0.08967589968357526 MAPE: 434.8953920378394 Pearson Correlation: 0.38153563901324705 Spearman Correlation: 0.40280460442883625 Coefficient of Determination: 0.13841605075416652 RMSE: 0.4610133775957622 NRMSE: 0.15193902102556264 MAPE: 168.22638894726822 Predictor: ElasticNet Pearson Correlation: 0.40237188375210964 Spearman Correlation: 0.4288996648292669 Coefficient of Determination: 0.024401782421258678 RMSE: 0.6187833740393123 NRMSE: 0.09675293159867286 MAPE: 317.6290333106935 Pearson Correlation: 0.3815356390132471 Spearman Correlation: 0.40280460442883625 Coefficient of Determination: 0.019329789868475 RMSE: 0.4918426881323329 NRMSE: 0.16209962696339492 MAPE: 158.21721034074145 Predictor: RandomForests Pearson Correlation: 0.4510661366641352 Spearman Correlation: 0.4465246887841456 Coefficient of Determination: 0.199567912918601 RMSE: 0.5604867911010524 NRMSE: 0.08763768135424163 MAPE: 529.5491842611985 Pearson Correlation: 0.3866330546263069 Spearman Correlation: 0.3981096259406254 Coefficient of Determination: 0.13840788698258943 RMSE: 0.4610155617120034 NRMSE: 0.15193974085821746 MAPE: 202.21690083920234 Protein: BRCA2 x_train_column_count: 1 x_train columns: ['BRCA2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.0016801136622338717 Spearman Correlation: -0.003365850045682841 Coefficient of Determination: 2.822781917766193e-06 RMSE: 0.1976109479453672 NRMSE: 0.1278323702957365 MAPE: 122.66734984794758 Pearson Correlation: -0.0840468407001926 Spearman Correlation: -0.06737887447433855 Coefficient of Determination: -0.005063311169702267 RMSE: 0.1852017608932443 NRMSE: 0.18535004092598512 MAPE: 104.3416555231443 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: RandomForests Pearson Correlation: 0.3257942376102405 Spearman Correlation: 0.25500959044958793 Coefficient of Determination: 0.04912356112431371 RMSE: 0.19269642508331206 NRMSE: 0.12465321897410636 MAPE: 133.9139947559344 Pearson Correlation: -0.03975777992192093 Spearman Correlation: -0.01067431406904905 Coefficient of Determination: -0.021845741347306546 RMSE: 0.18674159822161593 NRMSE: 0.18689111111050435 MAPE: 115.13583396986726 Protein: CDKN2A x_train_column_count: 1 x_train columns: ['CDKN2A'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 0.48027814349293335 Spearman Correlation: 0.4872043250292133 Coefficient of Determination: 0.23066709511701877 RMSE: 0.5637355359917146 NRMSE: 0.12744106160093013 MAPE: 154.405934596002 Pearson Correlation: 0.5965712816312629 Spearman Correlation: 0.5412203687445128 Coefficient of Determination: 0.351308157175233 RMSE: 0.6015355101867073 NRMSE: 0.16244545238636438 MAPE: 147.69299397970622 Predictor: ElasticNet Pearson Correlation: 0.48027814349293335 Spearman Correlation: 0.4872043250292133 Coefficient of Determination: 0.02562860399756539 RMSE: 0.6344253402682721 NRMSE: 0.1434215757360172 MAPE: 204.27961647628345 Pearson Correlation: 0.5965712816312632 Spearman Correlation: 0.5412203687445128 Coefficient of Determination: 0.026287142913119288 RMSE: 0.7369830572439918 NRMSE: 0.19902323987145337 MAPE: 422.40510313866633 Predictor: RandomForests Pearson Correlation: 0.6031166548470466 Spearman Correlation: 0.5142043852276713 Coefficient of Determination: 0.36338257195258583 RMSE: 0.5128112215701984 NRMSE: 0.11592883950948307 MAPE: 222.42155552398435 Pearson Correlation: 0.6736173012257093 Spearman Correlation: 0.5183481629817652 Coefficient of Determination: 0.4416816519711879 RMSE: 0.5580627074004604 NRMSE: 0.15070556505548485 MAPE: 518.4052407636528 Protein: TP53 x_train_column_count: 1 x_train columns: ['TP53'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.3555492854195285 Spearman Correlation: 0.2977431207885347 Coefficient of Determination: 0.12641529436233734 RMSE: 0.42323122279244935 NRMSE: 0.10171382427119668 MAPE: 551.3587248678076 Pearson Correlation: 0.2926026738474283 Spearman Correlation: 0.2420007804116672 Coefficient of Determination: 0.06543743518250467 RMSE: 0.40664203334490234 NRMSE: 0.14622677311118787 MAPE: 771.4393165883597 Predictor: ElasticNet Pearson Correlation: 0.3555492854195285 Spearman Correlation: 0.2977431207885347 Coefficient of Determination: 0.026933752753084295 RMSE: 0.44667988165008465 NRMSE: 0.1073491664624092 MAPE: 400.7378248823576 Pearson Correlation: 0.2926026738474282 Spearman Correlation: 0.2420007804116672 Coefficient of Determination: 0.024411308204534632 RMSE: 0.4154717093444187 NRMSE: 0.1494018876422808 MAPE: 375.67674402765863 Predictor: RandomForests Pearson Correlation: 0.45492238975734456 Spearman Correlation: 0.34634270161779623 Coefficient of Determination: 0.20619176236443626 RMSE: 0.40344374717794973 NRMSE: 0.09695836269597446 MAPE: 668.2271002590516 Pearson Correlation: 0.32834898408627644 Spearman Correlation: 0.28867684750577033 Coefficient of Determination: 0.09003759286253088 RMSE: 0.4012543959578011 NRMSE: 0.14428940125779463 MAPE: 1228.5518791228187 Protein: CTNNB1 x_train_column_count: 1 x_train columns: ['CTNNB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 0.08898105342822928 Spearman Correlation: 0.14590811000321963 Coefficient of Determination: 0.007917627869197252 RMSE: 0.7343107892164392 NRMSE: 0.14799580571506527 MAPE: 635.7829662685035 Pearson Correlation: -0.0024019468238156904 Spearman Correlation: -0.034040581406692035 Coefficient of Determination: -0.022319441458223288 RMSE: 0.7592919987705886 NRMSE: 0.1883818783234726 MAPE: 284.0557468282035 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: RandomForests Pearson Correlation: 0.3101921197195444 Spearman Correlation: 0.30218639412689285 Coefficient of Determination: 0.08112196149899753 RMSE: 0.7066998169279368 NRMSE: 0.14243098472860852 MAPE: 629.3479296651823 Pearson Correlation: -0.06030718098076416 Spearman Correlation: -0.04014575748895606 Coefficient of Determination: -0.07580801753149946 RMSE: 0.7789021484733238 NRMSE: 0.19324719606840765 MAPE: 401.6201927378137 Protein: CCNE1 x_train_column_count: 1 x_train columns: ['CCNE1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.7219395993512734 Spearman Correlation: 0.7131090453751777 Coefficient of Determination: 0.5211967851114769 RMSE: 0.3346791994961411 NRMSE: 0.08076820220965347 MAPE: 91.95768178212865 Pearson Correlation: 0.7713064884061223 Spearman Correlation: 0.7106623744024974 Coefficient of Determination: 0.5218333477620515 RMSE: 0.3713609996544497 NRMSE: 0.13227462142634006 MAPE: 54.38203983643349 Predictor: ElasticNet Pearson Correlation: 0.7219395993512734 Spearman Correlation: 0.7131090453751777 Coefficient of Determination: 0.03077080050273706 RMSE: 0.4761715428585635 NRMSE: 0.11491457944797247 MAPE: 119.01705479011031 Pearson Correlation: 0.7713064884061224 Spearman Correlation: 0.7106623744024974 Coefficient of Determination: 0.014782217751995619 RMSE: 0.533055919788934 NRMSE: 0.18986853776987853 MAPE: 84.17448812626547 Predictor: RandomForests Pearson Correlation: 0.8562861508639215 Spearman Correlation: 0.7204360697849619 Coefficient of Determination: 0.7279163800285591 RMSE: 0.25229078682087813 NRMSE: 0.06088538910173954 MAPE: 54.30365639848357 Pearson Correlation: 0.8350602153703399 Spearman Correlation: 0.7068832036023305 Coefficient of Determination: 0.6949121277125943 RMSE: 0.29663276628948443 NRMSE: 0.10565726314852517 MAPE: 44.991407020009255 Protein: CCND1 x_train_column_count: 1 x_train columns: ['CCND1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 0.4014769912379663 Spearman Correlation: 0.3731637827526827 Coefficient of Determination: 0.16118377449348997 RMSE: 0.21879564097710175 NRMSE: 0.13153361206255892 MAPE: 347.30997672634413 Pearson Correlation: 0.4722252539569459 Spearman Correlation: 0.4734221051604722 Coefficient of Determination: 0.08521214291088686 RMSE: 0.22471429002535698 NRMSE: 0.1600437938189825 MAPE: 1097.9020914203454 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: RandomForests Pearson Correlation: 0.4678371375434505 Spearman Correlation: 0.4000144577763212 Coefficient of Determination: 0.21263881710072907 RMSE: 0.21197871451568037 NRMSE: 0.12743547301083333 MAPE: 313.8994682707794 Pearson Correlation: 0.5051577497307473 Spearman Correlation: 0.4767786498993165 Coefficient of Determination: 0.2533320194705554 RMSE: 0.20301786639906733 NRMSE: 0.14459138111722075 MAPE: 1138.045040698996 Protein: ERBB2 x_train_column_count: 1 x_train columns: ['ERBB2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 0.7657610435301817 Spearman Correlation: 0.6137508967340191 Coefficient of Determination: 0.5863899757884328 RMSE: 0.6554327410192267 NRMSE: 0.11166375470964898 MAPE: 320.5730885843144 Pearson Correlation: 0.7627625013199513 Spearman Correlation: 0.7166081357916302 Coefficient of Determination: 0.5648365964407824 RMSE: 0.5983466371514004 NRMSE: 0.11094875526634533 MAPE: 281.0691986314359 Predictor: ElasticNet Pearson Correlation: 0.7657610435301817 Spearman Correlation: 0.6137508967340191 Coefficient of Determination: 0.14044650489331145 RMSE: 0.9448634714935858 NRMSE: 0.16097304316976777 MAPE: 582.6141905097294 Pearson Correlation: 0.7627625013199515 Spearman Correlation: 0.7166081357916302 Coefficient of Determination: 0.10192450101394424 RMSE: 0.8595736547415044 NRMSE: 0.1593869191065278 MAPE: 499.74610932649836 Predictor: RandomForests Pearson Correlation: 0.8350447059162798 Spearman Correlation: 0.6216515632506531 Coefficient of Determination: 0.6965509892505153 RMSE: 0.5614039541274837 NRMSE: 0.09564440331319891 MAPE: 467.4276979149924 Pearson Correlation: 0.8040149199599619 Spearman Correlation: 0.712575091635544 Coefficient of Determination: 0.6363330370305993 RMSE: 0.5469890053467115 NRMSE: 0.1014257380579847 MAPE: 341.96897482700155 Protein: ERBB3 x_train_column_count: 1 x_train columns: ['ERBB3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.40021079138717147 Spearman Correlation: 0.4461608353851102 Coefficient of Determination: 0.160168677542746 RMSE: 0.4207647918898243 NRMSE: 0.11355234069897321 MAPE: 200.24454248262975 Pearson Correlation: 0.424132615950813 Spearman Correlation: 0.47324952839944506 Coefficient of Determination: 0.17570228561293066 RMSE: 0.42264869569030494 NRMSE: 0.16959131664512106 MAPE: 193.89040426654321 Predictor: ElasticNet Pearson Correlation: 0.4002107913871715 Spearman Correlation: 0.4461608353851102 Coefficient of Determination: 0.04383943877554741 RMSE: 0.4489611601225439 NRMSE: 0.12116173120347591 MAPE: 212.3440091888109 Pearson Correlation: 0.4241326159508129 Spearman Correlation: 0.47324952839944506 Coefficient of Determination: 0.041458769712843124 RMSE: 0.45576700800318737 NRMSE: 0.18288031587184905 MAPE: 243.54596984138192 Predictor: RandomForests Pearson Correlation: 0.4888583547909291 Spearman Correlation: 0.46249054756555785 Coefficient of Determination: 0.2374084059193693 RMSE: 0.40094921293402225 NRMSE: 0.10820468467806303 MAPE: 242.40227594442695 Pearson Correlation: 0.4306135180238071 Spearman Correlation: 0.47175791537273415 Coefficient of Determination: 0.17674257303902818 RMSE: 0.4223819140865897 NRMSE: 0.16948426830002475 MAPE: 270.9861842046686 Fold: 2 Protein: RB1 x_train_column_count: 1 x_train columns: ['RB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.24789230471088958 Spearman Correlation: 0.3159366197816136 Coefficient of Determination: 0.061450594734876685 RMSE: 0.227704938830993 NRMSE: 0.08327418769418996 MAPE: 202.73532724373027 Pearson Correlation: 0.05322314385144893 Spearman Correlation: 0.10746268656716418 Coefficient of Determination: -0.04577677934407487 RMSE: 0.25044677379227626 NRMSE: 0.14348797068457808 MAPE: 328.7130777095198 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: RandomForests Pearson Correlation: 0.35614812748472296 Spearman Correlation: 0.4067656823580468 Coefficient of Determination: 0.11704931686327302 RMSE: 0.22085747588364613 NRMSE: 0.08076999556891681 MAPE: 212.91843709848632 Pearson Correlation: 0.11218713523215128 Spearman Correlation: 0.13196685330144695 Coefficient of Determination: -0.018378086466819266 RMSE: 0.24714422519366094 NRMSE: 0.14159584810169526 MAPE: 371.280873187673 Protein: CDH1 x_train_column_count: 1 x_train columns: ['CDH1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.4838912067728357 Spearman Correlation: 0.5479778011770806 Coefficient of Determination: 0.2341506999920714 RMSE: 0.9806662839711408 NRMSE: 0.1573219353446925 MAPE: 652.3991389829431 Pearson Correlation: 0.5757959526475029 Spearman Correlation: 0.6868207979709298 Coefficient of Determination: 0.26633076007756606 RMSE: 0.9855576770404496 NRMSE: 0.1750235618967234 MAPE: 250.84860187842585 Predictor: ElasticNet Pearson Correlation: 0.48389120677283565 Spearman Correlation: 0.5479778011770806 Coefficient of Determination: 0.06329132961528383 RMSE: 1.08455568310282 NRMSE: 0.1739882382454191 MAPE: 453.3429421222632 Pearson Correlation: 0.5757959526475029 Spearman Correlation: 0.6868207979709298 Coefficient of Determination: -0.006799303650066202 RMSE: 1.1545250037780566 NRMSE: 0.20503019069047354 MAPE: 181.33796361791812 Predictor: RandomForests Pearson Correlation: 0.7350620519654282 Spearman Correlation: 0.5614465463510813 Coefficient of Determination: 0.5400871009269116 RMSE: 0.7599541298952075 NRMSE: 0.12191451510310539 MAPE: 218.3262024908791 Pearson Correlation: 0.6514144231909483 Spearman Correlation: 0.6951134521052208 Coefficient of Determination: 0.3838100091909181 RMSE: 0.9032109819804985 NRMSE: 0.16039974817625618 MAPE: 213.09904146139536 Protein: CDH2 x_train_column_count: 1 x_train columns: ['CDH2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.1470313787581837 Spearman Correlation: 0.03346468965108404 Coefficient of Determination: 0.021618226339532587 RMSE: 0.36409773078103375 NRMSE: 0.13192902774876214 MAPE: 381.9470937388793 Pearson Correlation: 0.11717867760285977 Spearman Correlation: 0.063681592039801 Coefficient of Determination: 0.012877190177729814 RMSE: 0.3845800481612378 NRMSE: 0.2026056929364798 MAPE: 121.67281423224681 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: RandomForests Pearson Correlation: 0.19455280933418412 Spearman Correlation: 0.14521011138581139 Coefficient of Determination: 0.03651059964118086 RMSE: 0.3613160602024537 NRMSE: 0.13092110305183483 MAPE: 424.3360219113005 Pearson Correlation: 0.11830349762100852 Spearman Correlation: 0.0855059428777579 Coefficient of Determination: 0.010769358098726367 RMSE: 0.3849904316896376 NRMSE: 0.20282189250153443 MAPE: 124.97634642871276 Protein: CDH3 x_train_column_count: 1 x_train columns: ['CDH3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.3303764572390311 Spearman Correlation: 0.3550272027884919 Coefficient of Determination: 0.10914860349781341 RMSE: 0.1960438181206852 NRMSE: 0.1475422532197551 MAPE: 270.9980417434456 Pearson Correlation: 0.10770672491069783 Spearman Correlation: 0.25419471271095506 Coefficient of Determination: -0.18113430748961412 RMSE: 0.21510760863297942 NRMSE: 0.17699959568253062 MAPE: 624.4702544671218 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: RandomForests Pearson Correlation: 0.4204408504993642 Spearman Correlation: 0.38155013256774595 Coefficient of Determination: 0.17584235816615323 RMSE: 0.18856264633511197 NRMSE: 0.14191193570937055 MAPE: 407.97875051638437 Pearson Correlation: 0.15295236629097841 Spearman Correlation: 0.25482125674289846 Coefficient of Determination: -0.20407823566708516 RMSE: 0.21718682836391678 NRMSE: 0.17871046520523065 MAPE: 749.9682708776052 Protein: PTEN x_train_column_count: 1 x_train columns: ['PTEN'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.41283271851189246 Spearman Correlation: 0.4509122731754614 Coefficient of Determination: 0.1704308534739195 RMSE: 0.5681154375639597 NRMSE: 0.08883049606191222 MAPE: 340.1165131813267 Pearson Correlation: 0.3635067117705542 Spearman Correlation: 0.32171495463857186 Coefficient of Determination: 0.08295221188442037 RMSE: 0.4899504108238007 NRMSE: 0.16432466153199649 MAPE: 696.1906514966496 Predictor: ElasticNet Pearson Correlation: 0.41283271851189235 Spearman Correlation: 0.4509122731754614 Coefficient of Determination: 0.023354812052411522 RMSE: 0.616422811951563 NRMSE: 0.09638383425088938 MAPE: 240.95759885123482 Pearson Correlation: 0.3635067117705542 Spearman Correlation: 0.32171495463857186 Coefficient of Determination: 0.027931747156678455 RMSE: 0.5044341983484711 NRMSE: 0.1691823847425782 MAPE: 412.1299631895158 Predictor: RandomForests Pearson Correlation: 0.4637617822650544 Spearman Correlation: 0.47168364395156603 Coefficient of Determination: 0.21156824157538845 RMSE: 0.5538502419387915 NRMSE: 0.08659999092155289 MAPE: 387.81209059025514 Pearson Correlation: 0.3283337114702817 Spearman Correlation: 0.31888806115781315 Coefficient of Determination: 0.06748232850836522 RMSE: 0.49406566940135677 NRMSE: 0.16570487972945963 MAPE: 807.3513768694605 Protein: BRCA2 x_train_column_count: 1 x_train columns: ['BRCA2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.04001158289267249 Spearman Correlation: 0.057472501576392276 Coefficient of Determination: 0.0016009267655772152 RMSE: 0.19516798278839598 NRMSE: 0.12573231295757512 MAPE: 117.98294827979336 Pearson Correlation: -0.07561513606008487 Spearman Correlation: -0.13059701492537315 Coefficient of Determination: -0.02452145724173871 RMSE: 0.19554203218990604 NRMSE: 0.13236178253329048 MAPE: 118.7555136669517 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: RandomForests Pearson Correlation: 0.3068850157044312 Spearman Correlation: 0.25247642075531285 Coefficient of Determination: 0.044202194303427866 RMSE: 0.19095872370308548 NRMSE: 0.12302059829478852 MAPE: 126.6880580191218 Pearson Correlation: 0.07896059153515289 Spearman Correlation: 0.05877387777856347 Coefficient of Determination: -0.011046221373264498 RMSE: 0.19425182166951882 NRMSE: 0.13148844311664884 MAPE: 123.9361936403578 Protein: CDKN2A x_train_column_count: 1 x_train columns: ['CDKN2A'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.5036612591893176 Spearman Correlation: 0.4759909513511134 Coefficient of Determination: 0.25367466400816874 RMSE: 0.5730645647248521 NRMSE: 0.1295500315869452 MAPE: 165.20729153512264 Pearson Correlation: 0.562783406547642 Spearman Correlation: 0.5756072578285046 Coefficient of Determination: 0.2930656148585533 RMSE: 0.5662177809563149 NRMSE: 0.15296568536749378 MAPE: 173.217205001395 Predictor: ElasticNet Pearson Correlation: 0.5036612591893176 Spearman Correlation: 0.4759909513511134 Coefficient of Determination: 0.03645107056921948 RMSE: 0.6511429591282857 NRMSE: 0.14720084980858722 MAPE: 281.0400850769281 Pearson Correlation: 0.562783406547642 Spearman Correlation: 0.5756072578285046 Coefficient of Determination: 0.029195285258933223 RMSE: 0.6635289694095704 NRMSE: 0.1792546383751811 MAPE: 239.94265975013613 Predictor: RandomForests Pearson Correlation: 0.6040027516191304 Spearman Correlation: 0.4861296560239233 Coefficient of Determination: 0.36433447381499207 RMSE: 0.528875917565927 NRMSE: 0.11956051035739278 MAPE: 257.31980271784846 Pearson Correlation: 0.6768078158008014 Spearman Correlation: 0.569489990183919 Coefficient of Determination: 0.44303391666723235 RMSE: 0.5025836141073503 NRMSE: 0.13577469583621957 MAPE: 209.43106914074932 Protein: TP53 x_train_column_count: 1 x_train columns: ['TP53'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 0.3251680923816741 Spearman Correlation: 0.28717437803663004 Coefficient of Determination: 0.10573428830313691 RMSE: 0.43057838556509015 NRMSE: 0.11532834754656225 MAPE: 395.91507483603414 Pearson Correlation: 0.41091156162636316 Spearman Correlation: 0.3101990049751244 Coefficient of Determination: 0.1669877225256251 RMSE: 0.37364228584578285 NRMSE: 0.12305031643200488 MAPE: 1296.986191630158 Predictor: ElasticNet Pearson Correlation: 0.3251680923816741 Spearman Correlation: 0.28717437803663004 Coefficient of Determination: 0.020653076550932403 RMSE: 0.45059588071680967 NRMSE: 0.12068993724837544 MAPE: 260.5823238776231 Pearson Correlation: 0.41091156162636305 Spearman Correlation: 0.3101990049751244 Coefficient of Determination: 0.030106195426567672 RMSE: 0.40317390186373625 NRMSE: 0.13277586097933022 MAPE: 958.9705318458945 Predictor: RandomForests Pearson Correlation: 0.41836058695215167 Spearman Correlation: 0.35514670974367946 Coefficient of Determination: 0.17435957320281414 RMSE: 0.4137275203739926 NRMSE: 0.11081492443390721 MAPE: 505.56269271180315 Pearson Correlation: 0.46793918082121677 Spearman Correlation: 0.28068144997753247 Coefficient of Determination: 0.21780722524703144 RMSE: 0.36206556235238085 NRMSE: 0.11923779428696882 MAPE: 1845.1105999300512 Protein: CTNNB1 x_train_column_count: 1 x_train columns: ['CTNNB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.06641728094381416 Spearman Correlation: 0.11831189699055593 Coefficient of Determination: 0.004411255207969478 RMSE: 0.7233827756464993 NRMSE: 0.14228614784549556 MAPE: 607.0010833449173 Pearson Correlation: 0.13956120176564732 Spearman Correlation: 0.1409813676714467 Coefficient of Determination: -0.11076417840848163 RMSE: 0.8078718363971094 NRMSE: 0.20105817087606317 MAPE: 216.94387718013633 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: RandomForests Pearson Correlation: 0.2846108698980282 Spearman Correlation: 0.29112484755208995 Coefficient of Determination: 0.06903793114490742 RMSE: 0.6995103870594284 NRMSE: 0.13759055606991116 MAPE: 631.5545292503399 Pearson Correlation: 0.0711397534338752 Spearman Correlation: 0.14282184909213674 Coefficient of Determination: -0.1285956971281863 RMSE: 0.8143305550615784 NRMSE: 0.20266557702933685 MAPE: 489.1762361982494 Protein: CCNE1 x_train_column_count: 1 x_train columns: ['CCNE1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.729924711609084 Spearman Correlation: 0.7061567494715154 Coefficient of Determination: 0.5327900846176046 RMSE: 0.35051079946653413 NRMSE: 0.08458884558885396 MAPE: 90.83614166716927 Pearson Correlation: 0.7770270702564801 Spearman Correlation: 0.7531411569602966 Coefficient of Determination: 0.46747886325152765 RMSE: 0.30523096808283556 NRMSE: 0.16588729725859142 MAPE: 56.09620217722176 Predictor: ElasticNet Pearson Correlation: 0.7299247116090841 Spearman Correlation: 0.7061567494715154 Coefficient of Determination: 0.03667931381333689 RMSE: 0.5033045088794984 NRMSE: 0.12146258389350059 MAPE: 118.3815866962251 Pearson Correlation: 0.7770270702564799 Spearman Correlation: 0.7531411569602966 Coefficient of Determination: 0.02245204702758996 RMSE: 0.4135511227396713 NRMSE: 0.22475726647409572 MAPE: 81.34737690433269 Predictor: RandomForests Pearson Correlation: 0.8577101219397514 Spearman Correlation: 0.7101695638315398 Coefficient of Determination: 0.7317659742467798 RMSE: 0.26558424714779255 NRMSE: 0.06409350270236565 MAPE: 67.88985778990819 Pearson Correlation: 0.8351430823920907 Spearman Correlation: 0.7370836679134409 Coefficient of Determination: 0.6941548923260417 RMSE: 0.2313188038212206 NRMSE: 0.12571742445405715 MAPE: 40.56267191069466 Protein: CCND1 x_train_column_count: 1 x_train columns: ['CCND1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.42236027416892147 Spearman Correlation: 0.3945270040292828 Coefficient of Determination: 0.1783882011960466 RMSE: 0.21640426284054698 NRMSE: 0.13009598468248967 MAPE: 534.8786478153853 Pearson Correlation: 0.29695214528728026 Spearman Correlation: 0.3886206223783046 Coefficient of Determination: 0.08424001920543 RMSE: 0.2252951966327131 NRMSE: 0.17430153852255456 MAPE: 350.0330656369793 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: RandomForests Pearson Correlation: 0.5009246505960983 Spearman Correlation: 0.40965593127045014 Coefficient of Determination: 0.2468749440121255 RMSE: 0.20718868121322256 NRMSE: 0.12455584351109315 MAPE: 491.23954825070194 Pearson Correlation: 0.3225095409332166 Spearman Correlation: 0.3839087800361473 Coefficient of Determination: 0.09369217172592081 RMSE: 0.22412947187967547 NRMSE: 0.17339966568644818 MAPE: 339.86681722580477 Protein: ERBB2 x_train_column_count: 1 x_train columns: ['ERBB2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.7536423359707011 Spearman Correlation: 0.6630955260861322 Coefficient of Determination: 0.5679767705673753 RMSE: 0.6461166342040771 NRMSE: 0.11595151628664592 MAPE: 210.2019794928544 Pearson Correlation: 0.8108498416783881 Spearman Correlation: 0.5166032582187103 Coefficient of Determination: 0.6340678454836574 RMSE: 0.6395258414521928 NRMSE: 0.10895375256864795 MAPE: 809.011693190333 Predictor: ElasticNet Pearson Correlation: 0.753642335970701 Spearman Correlation: 0.6630955260861322 Coefficient of Determination: 0.1235704048334555 RMSE: 0.9202713245539313 NRMSE: 0.16515107308542815 MAPE: 380.8008514263541 Pearson Correlation: 0.8108498416783884 Spearman Correlation: 0.5166032582187103 Coefficient of Determination: 0.12069548978323963 RMSE: 0.9913510293027509 NRMSE: 0.16889296374648635 MAPE: 1278.4076069657146 Predictor: RandomForests Pearson Correlation: 0.8389294424186137 Spearman Correlation: 0.6674393366047144 Coefficient of Determination: 0.7023030045025691 RMSE: 0.5363454470636926 NRMSE: 0.09625207671225393 MAPE: 280.2953308487789 Pearson Correlation: 0.8161121853257634 Spearman Correlation: 0.5012523821949281 Coefficient of Determination: 0.6428254688684671 RMSE: 0.63182681426791 NRMSE: 0.10764209657527812 MAPE: 1420.7544425542162 Protein: ERBB3 x_train_column_count: 1 x_train columns: ['ERBB3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.4140202554588074 Spearman Correlation: 0.4574811032948563 Coefficient of Determination: 0.17141277193017623 RMSE: 0.4051902314315764 NRMSE: 0.10934921384644226 MAPE: 181.83691718420613 Pearson Correlation: 0.38212391915057364 Spearman Correlation: 0.4416544727343674 Coefficient of Determination: 0.14278323145190197 RMSE: 0.47938761999648344 NRMSE: 0.17692256761963376 MAPE: 302.11907423555215 Predictor: ElasticNet Pearson Correlation: 0.41402025545880744 Spearman Correlation: 0.4574811032948563 Coefficient of Determination: 0.04505311002035017 RMSE: 0.43499018578139437 NRMSE: 0.11739136621842691 MAPE: 209.10771780976933 Pearson Correlation: 0.38212391915057364 Spearman Correlation: 0.4416544727343674 Coefficient of Determination: 0.039804617197458425 RMSE: 0.5073659198963146 NRMSE: 0.18724822570806457 MAPE: 282.6400886562516 Predictor: RandomForests Pearson Correlation: 0.4937926972662044 Spearman Correlation: 0.47011878226411286 Coefficient of Determination: 0.24235048330361064 RMSE: 0.38745745765908807 NRMSE: 0.10456364716462097 MAPE: 216.39720242867085 Pearson Correlation: 0.43320350506909144 Spearman Correlation: 0.44593650227107995 Coefficient of Determination: 0.18582907647625257 RMSE: 0.46719617614868336 NRMSE: 0.1724231991366529 MAPE: 360.2215328744491 Fold: 3 Protein: RB1 x_train_column_count: 1 x_train columns: ['RB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.20536425783313839 Spearman Correlation: 0.28181864803860485 Coefficient of Determination: 0.04217447839535582 RMSE: 0.23545330468119732 NRMSE: 0.08610784986878194 MAPE: 195.98495621171838 Pearson Correlation: 0.2109008845607475 Spearman Correlation: 0.26769161710245765 Coefficient of Determination: 0.022118335834523384 RMSE: 0.21919993277299263 NRMSE: 0.15380940312740687 MAPE: 232.70273205909703 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: RandomForests Pearson Correlation: 0.3151512292058805 Spearman Correlation: 0.3524539498229516 Coefficient of Determination: 0.09186867165257584 RMSE: 0.22926402724699074 NRMSE: 0.08384436338757707 MAPE: 273.67842010321056 Pearson Correlation: 0.2300590252443082 Spearman Correlation: 0.28681957460006946 Coefficient of Determination: 0.025303836965301807 RMSE: 0.2188426138644487 NRMSE: 0.15355867764882655 MAPE: 235.88853086302066 Protein: CDH1 x_train_column_count: 1 x_train columns: ['CDH1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.5061521824683969 Spearman Correlation: 0.6060433571893057 Coefficient of Determination: 0.2561900318175212 RMSE: 1.0131204376541854 NRMSE: 0.1613197728821033 MAPE: 729.5897156629053 Pearson Correlation: 0.49632021780749236 Spearman Correlation: 0.46526016533872 Coefficient of Determination: 0.21170636467694093 RMSE: 0.8359546694956115 NRMSE: 0.16434448737773985 MAPE: 349.94804563473247 Predictor: ElasticNet Pearson Correlation: 0.5061521824683969 Spearman Correlation: 0.6060433571893057 Coefficient of Determination: 0.07557540428171028 RMSE: 1.1294469197363601 NRMSE: 0.17984250815839622 MAPE: 561.7599950087528 Pearson Correlation: 0.49632021780749236 Spearman Correlation: 0.46526016533872 Coefficient of Determination: 0.028135661651947363 RMSE: 0.9281999510120545 NRMSE: 0.1824794461943252 MAPE: 280.55628317932803 Predictor: RandomForests Pearson Correlation: 0.720658592011157 Spearman Correlation: 0.6176291946545054 Coefficient of Determination: 0.5189174241027371 RMSE: 0.8147791240760056 NRMSE: 0.12973776696219955 MAPE: 282.7560913470706 Pearson Correlation: 0.7353301371123111 Spearman Correlation: 0.46500928923410684 Coefficient of Determination: 0.538426650574287 RMSE: 0.63967456230514 NRMSE: 0.1257568046052648 MAPE: 186.00534358064274 Protein: CDH2 x_train_column_count: 1 x_train columns: ['CDH2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.1426127701108289 Spearman Correlation: -0.004338932550925531 Coefficient of Determination: 0.020338402198684102 RMSE: 0.37734116573013987 NRMSE: 0.13672772147624462 MAPE: 205.27568788923608 Pearson Correlation: 0.1451886540719864 Spearman Correlation: 0.23133206149702618 Coefficient of Determination: 0.0139564430879906 RMSE: 0.32965367947159396 NRMSE: 0.17369574444727484 MAPE: 675.7840877768981 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: RandomForests Pearson Correlation: 0.23493300907448675 Spearman Correlation: 0.21194477216286742 Coefficient of Determination: 0.04976239614304989 RMSE: 0.3716312713312571 NRMSE: 0.1346587692337333 MAPE: 387.79228301128836 Pearson Correlation: -0.02522530974628973 Spearman Correlation: -0.1851350763201282 Coefficient of Determination: -0.0407518659493773 RMSE: 0.33867526307154056 NRMSE: 0.17844925025372552 MAPE: 642.4010366244271 Protein: CDH3 x_train_column_count: 1 x_train columns: ['CDH3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.3026146976584992 Spearman Correlation: 0.3386347347546788 Coefficient of Determination: 0.09157565523894473 RMSE: 0.2025467087768724 NRMSE: 0.14210214175848376 MAPE: 362.2955007259329 Pearson Correlation: 0.2244036246490851 Spearman Correlation: 0.31279442387062184 Coefficient of Determination: 0.023797504951999726 RMSE: 0.18607390663573836 NRMSE: 0.16184984094195584 MAPE: 145.3763024255934 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: RandomForests Pearson Correlation: 0.38429063561532717 Spearman Correlation: 0.366929487494884 Coefficient of Determination: 0.14614884835263475 RMSE: 0.19636853167347101 NRMSE: 0.13776767390236222 MAPE: 480.79342950124743 Pearson Correlation: 0.27910731531306143 Spearman Correlation: 0.30860684283191253 Coefficient of Determination: 0.0655555461704449 RMSE: 0.1820506628174801 NRMSE: 0.15835036385874218 MAPE: 188.00773874257487 Protein: PTEN x_train_column_count: 1 x_train columns: ['PTEN'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 0.39398785459126584 Spearman Correlation: 0.4168387026449609 Coefficient of Determination: 0.15522642956542843 RMSE: 0.5783942541009418 NRMSE: 0.0904376912049006 MAPE: 436.81889349420373 Pearson Correlation: 0.3976334585902839 Spearman Correlation: 0.39053105400316723 Coefficient of Determination: 0.1461824631825107 RMSE: 0.4351761587473583 NRMSE: 0.10404441226685754 MAPE: 116.83152125957916 Predictor: ElasticNet Pearson Correlation: 0.3939878545912659 Spearman Correlation: 0.4168387026449609 Coefficient of Determination: 0.024536821370012563 RMSE: 0.6215259286412055 NRMSE: 0.09718175727327112 MAPE: 261.97498625956325 Pearson Correlation: 0.3976334585902837 Spearman Correlation: 0.39053105400316723 Coefficient of Determination: -0.03271858195499333 RMSE: 0.4786009482980652 NRMSE: 0.1144266600435292 MAPE: 92.27394874682908 Predictor: RandomForests Pearson Correlation: 0.4486456840284966 Spearman Correlation: 0.44022349775190645 Coefficient of Determination: 0.19703242003461852 RMSE: 0.5639009371276077 NRMSE: 0.08817151702409627 MAPE: 546.1899445028266 Pearson Correlation: 0.3687177757531359 Spearman Correlation: 0.405227077725146 Coefficient of Determination: 0.1312647338902646 RMSE: 0.43896135222360844 NRMSE: 0.10494939803557798 MAPE: 126.18039299878608 Protein: BRCA2 x_train_column_count: 1 x_train columns: ['BRCA2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.029598716808603823 Spearman Correlation: 0.007235394469500479 Coefficient of Determination: 0.0008760840367157963 RMSE: 0.18996688066183695 NRMSE: 0.12803418479351694 MAPE: 114.82449131210666 Pearson Correlation: -0.01605456565446292 Spearman Correlation: 0.05298569807603587 Coefficient of Determination: -0.005863409902131078 RMSE: 0.21475827190110194 NRMSE: 0.14771287504632535 MAPE: 112.83494974880834 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: RandomForests Pearson Correlation: 0.2847852536520081 Spearman Correlation: 0.24810712888855369 Coefficient of Determination: 0.04356944145348551 RMSE: 0.18586385299339783 NRMSE: 0.1252688195841519 MAPE: 118.71205027999494 Pearson Correlation: -0.008597785420769612 Spearman Correlation: -0.1128019880749639 Coefficient of Determination: -0.012088332481777764 RMSE: 0.2154217773299026 NRMSE: 0.14816924067838874 MAPE: 157.49003513886964 Protein: CDKN2A x_train_column_count: 1 x_train columns: ['CDKN2A'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.5076634573044784 Spearman Correlation: 0.4770131653521852 Coefficient of Determination: 0.2577221858823361 RMSE: 0.5751641428613341 NRMSE: 0.1342837464655711 MAPE: 175.60838217316672 Pearson Correlation: 0.536825509758858 Spearman Correlation: 0.5740296013666005 Coefficient of Determination: 0.2815143854042633 RMSE: 0.5565075134966199 NRMSE: 0.17180930304609918 MAPE: 120.0057721559081 Predictor: ElasticNet Pearson Correlation: 0.5076634573044784 Spearman Correlation: 0.4770131653521852 Coefficient of Determination: 0.036194065040067835 RMSE: 0.6553953583733332 NRMSE: 0.1530153526273191 MAPE: 297.62018520166134 Pearson Correlation: 0.5368255097588582 Spearman Correlation: 0.5740296013666005 Coefficient of Determination: 0.03083138193311097 RMSE: 0.6463409394640487 NRMSE: 0.19954337299374786 MAPE: 171.39601367062235 Predictor: RandomForests Pearson Correlation: 0.6245172571557215 Spearman Correlation: 0.4954089061519607 Coefficient of Determination: 0.3894788522073944 RMSE: 0.5216256263174344 NRMSE: 0.12178409280851568 MAPE: 264.11801229845923 Pearson Correlation: 0.6251797457998285 Spearman Correlation: 0.5733110855363031 Coefficient of Determination: 0.38811166296195954 RMSE: 0.5135681488886652 NRMSE: 0.15855273035369863 MAPE: 124.73179501297591 Protein: TP53 x_train_column_count: 1 x_train columns: ['TP53'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.3519419853875893 Spearman Correlation: 0.29871023780362554 Coefficient of Determination: 0.12386316107855821 RMSE: 0.4213154057090008 NRMSE: 0.10125340199687595 MAPE: 571.7401607647244 Pearson Correlation: 0.2980744477164273 Spearman Correlation: 0.2638162570605619 Coefficient of Determination: 0.07494796243869972 RMSE: 0.41400359918732 NRMSE: 0.15438160234304485 MAPE: 478.6830311943441 Predictor: ElasticNet Pearson Correlation: 0.3519419853875893 Spearman Correlation: 0.29871023780362554 Coefficient of Determination: 0.028919334894862203 RMSE: 0.44355657620955213 NRMSE: 0.1065985523214497 MAPE: 375.36566134323886 Pearson Correlation: 0.29807444771642727 Spearman Correlation: 0.2638162570605619 Coefficient of Determination: 0.012100135114093469 RMSE: 0.42783616991957013 NRMSE: 0.1595397566160034 MAPE: 285.6258483350058 Predictor: RandomForests Pearson Correlation: 0.45570202069206317 Spearman Correlation: 0.35162246446507417 Coefficient of Determination: 0.2064007311866748 RMSE: 0.40097934166090254 NRMSE: 0.0963660998944731 MAPE: 818.1649159606385 Pearson Correlation: 0.2984791130638284 Spearman Correlation: 0.26907455660028845 Coefficient of Determination: 0.0658446370334902 RMSE: 0.4160356917475398 NRMSE: 0.15513936799090863 MAPE: 471.9253068166904 Protein: CTNNB1 x_train_column_count: 1 x_train columns: ['CTNNB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.0517474756663673 Spearman Correlation: 0.07873234122650967 Coefficient of Determination: 0.0026778012378414484 RMSE: 0.7681668709940904 NRMSE: 0.15109497855902645 MAPE: 433.4262364661056 Pearson Correlation: 0.21972783891735959 Spearman Correlation: 0.26859935909425303 Coefficient of Determination: 0.009575156502854565 RMSE: 0.6100286689166915 NRMSE: 0.19942746376693957 MAPE: 1336.3278344093535 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: RandomForests Pearson Correlation: 0.28283871709746194 Spearman Correlation: 0.27248155031404964 Coefficient of Determination: 0.056911975463831976 RMSE: 0.7469885508843376 NRMSE: 0.14692929797095547 MAPE: 449.58995100093125 Pearson Correlation: 0.20590790949456775 Spearman Correlation: 0.1399556799237513 Coefficient of Determination: 0.026453487374958562 RMSE: 0.6048084295659103 NRMSE: 0.1977208897204584 MAPE: 1426.5538436896502 Protein: CCNE1 x_train_column_count: 1 x_train columns: ['CCNE1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.731155078102014 Spearman Correlation: 0.724580992574438 Coefficient of Determination: 0.5345877482343622 RMSE: 0.35640285844531305 NRMSE: 0.08601077743208076 MAPE: 77.48353179860717 Pearson Correlation: 0.6686208249928275 Spearman Correlation: 0.6712078704223245 Coefficient of Determination: 0.4364788914076563 RMSE: 0.2739147556273362 NRMSE: 0.11931644188148982 MAPE: 97.28225630852704 Predictor: ElasticNet Pearson Correlation: 0.7311550781020141 Spearman Correlation: 0.724580992574438 Coefficient of Determination: 0.034002727367039465 RMSE: 0.5134642637329626 NRMSE: 0.12391443968746835 MAPE: 104.78887975263882 Pearson Correlation: 0.6686208249928273 Spearman Correlation: 0.6712078704223245 Coefficient of Determination: 0.022439477553301668 RMSE: 0.3607714493679508 NRMSE: 0.1571509558600648 MAPE: 131.9402450389214 Predictor: RandomForests Pearson Correlation: 0.8620576959955392 Spearman Correlation: 0.7260197277689745 Coefficient of Determination: 0.7409729273935419 RMSE: 0.26588562094289714 NRMSE: 0.06416623330426845 MAPE: 55.85462183805717 Pearson Correlation: 0.7693889488812767 Spearman Correlation: 0.6683249776710507 Coefficient of Determination: 0.5225628425841873 RMSE: 0.25212646899839464 NRMSE: 0.10982552990303378 MAPE: 78.16212414126768 Protein: CCND1 x_train_column_count: 1 x_train columns: ['CCND1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.41041993626280227 Spearman Correlation: 0.40702588796834765 Coefficient of Determination: 0.16844452408196253 RMSE: 0.2231013144804463 NRMSE: 0.13412205845814423 MAPE: 532.0448309434951 Pearson Correlation: 0.3721019412428963 Spearman Correlation: 0.3490592152021846 Coefficient of Determination: 0.11233592807704806 RMSE: 0.197608097567355 NRMSE: 0.18724768325296826 MAPE: 345.7158784675023 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: RandomForests Pearson Correlation: 0.48699822442771834 Spearman Correlation: 0.43302356100040734 Coefficient of Determination: 0.2329800130729628 RMSE: 0.21426925304637665 NRMSE: 0.12881247853601416 MAPE: 532.0829627883396 Pearson Correlation: 0.3682241478957792 Spearman Correlation: 0.3545397794492318 Coefficient of Determination: 0.12538407752351843 RMSE: 0.19615035827191662 NRMSE: 0.18586637191391944 MAPE: 242.12255902019984 Protein: ERBB2 x_train_column_count: 1 x_train columns: ['ERBB2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 0.757630742403632 Spearman Correlation: 0.6175542476381123 Coefficient of Determination: 0.5740043418350786 RMSE: 0.6404358362682986 NRMSE: 0.1091087851624953 MAPE: 320.7122473043479 Pearson Correlation: 0.7901604979795926 Spearman Correlation: 0.693151651706485 Coefficient of Determination: 0.6172623825300021 RMSE: 0.6598241207246933 NRMSE: 0.11902448241660533 MAPE: 141.8418124310345 Predictor: ElasticNet Pearson Correlation: 0.757630742403632 Spearman Correlation: 0.6175542476381123 Coefficient of Determination: 0.11558711492132345 RMSE: 0.922785091803486 NRMSE: 0.1572116278180292 MAPE: 571.3407183590255 Pearson Correlation: 0.7901604979795926 Spearman Correlation: 0.693151651706485 Coefficient of Determination: 0.13519455858328966 RMSE: 0.9918290399756333 NRMSE: 0.17891425066304087 MAPE: 255.96928826626169 Predictor: RandomForests Pearson Correlation: 0.819999050484025 Spearman Correlation: 0.6221160255281639 Coefficient of Determination: 0.670233501848126 RMSE: 0.5634771446431789 NRMSE: 0.09599760543863893 MAPE: 549.6016379139868 Pearson Correlation: 0.8604407371645879 Spearman Correlation: 0.6851291397706071 Coefficient of Determination: 0.7380335646767575 RMSE: 0.5458840920255202 NRMSE: 0.09847104625613685 MAPE: 202.52741537438453 Protein: ERBB3 x_train_column_count: 1 x_train columns: ['ERBB3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.4118347805352837 Spearman Correlation: 0.4548855783210745 Coefficient of Determination: 0.1696078864585452 RMSE: 0.4109815959703826 NRMSE: 0.14902138098256357 MAPE: 205.9352300488748 Pearson Correlation: 0.39517943353034346 Spearman Correlation: 0.4259180289031036 Coefficient of Determination: 0.13282016833206411 RMSE: 0.4606972196012416 NRMSE: 0.12808708406234562 MAPE: 147.06597736539783 Predictor: ElasticNet Pearson Correlation: 0.41183478053528383 Spearman Correlation: 0.4548855783210745 Coefficient of Determination: 0.04755145498089686 RMSE: 0.4401508325951001 NRMSE: 0.15959810745071382 MAPE: 228.9864985313079 Pearson Correlation: 0.3951794335303434 Spearman Correlation: 0.4259180289031036 Coefficient of Determination: 0.025392691162460124 RMSE: 0.48840020639274356 NRMSE: 0.1357893115709303 MAPE: 155.3064269485719 Predictor: RandomForests Pearson Correlation: 0.4999772787130882 Spearman Correlation: 0.47145580278027005 Coefficient of Determination: 0.24936566604040078 RMSE: 0.39074639408774725 NRMSE: 0.14168412364895636 MAPE: 239.36369085083874 Pearson Correlation: 0.40632927276753494 Spearman Correlation: 0.4286995163716889 Coefficient of Determination: 0.13799826967697426 RMSE: 0.45931970330957334 NRMSE: 0.1277040948938829 MAPE: 166.28304846884032 Fold: 4 Protein: RB1 x_train_column_count: 1 x_train columns: ['RB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.20060321424304425 Spearman Correlation: 0.2604333098848863 Coefficient of Determination: 0.040241649564640825 RMSE: 0.2463982702627586 NRMSE: 0.09011054354255361 MAPE: 268.42741313559105 Pearson Correlation: 0.3029177651686274 Spearman Correlation: 0.3658524420503997 Coefficient of Determination: 0.0009212273884317002 RMSE: 0.16480638458270389 NRMSE: 0.15790287105996234 MAPE: 110.48529460613344 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: RandomForests Pearson Correlation: 0.3354716659774619 Spearman Correlation: 0.36872499080973353 Coefficient of Determination: 0.09970165657844221 RMSE: 0.23864367620422963 NRMSE: 0.08727460364402781 MAPE: 320.1667713812272 Pearson Correlation: 0.2489237660453198 Spearman Correlation: 0.34152871277647523 Coefficient of Determination: -0.03633114959068817 RMSE: 0.16785081043222436 NRMSE: 0.16081977008414552 MAPE: 112.5832654307591 Protein: CDH1 x_train_column_count: 1 x_train columns: ['CDH1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 0.5112589407667545 Spearman Correlation: 0.6035344748233071 Coefficient of Determination: 0.2613857045139436 RMSE: 0.9617082199179806 NRMSE: 0.15313337472022873 MAPE: 736.7428771637664 Pearson Correlation: 0.46754759908450405 Spearman Correlation: 0.44892080948640256 Coefficient of Determination: 0.18511913871768682 RMSE: 1.0529605857943893 NRMSE: 0.1910236540391113 MAPE: 375.52126774183404 Predictor: ElasticNet Pearson Correlation: 0.5112589407667545 Spearman Correlation: 0.6035344748233071 Coefficient of Determination: 0.06784846393718191 RMSE: 1.0803829788764219 NRMSE: 0.17203002752721597 MAPE: 562.9812988720985 Pearson Correlation: 0.46754759908450405 Spearman Correlation: 0.44892080948640256 Coefficient of Determination: 0.008622323899579842 RMSE: 1.1614074933215512 NRMSE: 0.2106976331268008 MAPE: 357.1028804839544 Predictor: RandomForests Pearson Correlation: 0.7087465928671025 Spearman Correlation: 0.6151147498515491 Coefficient of Determination: 0.5020692188726259 RMSE: 0.7896214925151644 NRMSE: 0.12573190225075068 MAPE: 347.50739803543973 Pearson Correlation: 0.7565120663505035 Spearman Correlation: 0.44363902379888376 Coefficient of Determination: 0.5235914114602802 RMSE: 0.8051093072939526 NRMSE: 0.1460595238369349 MAPE: 167.38169848454703 Protein: CDH2 x_train_column_count: 1 x_train columns: ['CDH2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.1272657541228809 Spearman Correlation: 0.07146547137499795 Coefficient of Determination: 0.016196572172465618 RMSE: 0.3762787992251089 NRMSE: 0.13634277818142942 MAPE: 647.0463099258229 Pearson Correlation: 0.20599048693772695 Spearman Correlation: -0.07145475629371938 Coefficient of Determination: -0.018662252249238565 RMSE: 0.3363624137974115 NRMSE: 0.17351864027351918 MAPE: 149.9789550533449 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: RandomForests Pearson Correlation: 0.20068017063291904 Spearman Correlation: 0.19591540058773488 Coefficient of Determination: 0.035911956927223376 RMSE: 0.37248941165378463 NRMSE: 0.13496971217254317 MAPE: 884.409767131594 Pearson Correlation: 0.13975849733951237 Spearman Correlation: -0.007879855739278996 Coefficient of Determination: -0.03649031714906359 RMSE: 0.33929306149406074 NRMSE: 0.1750304679408922 MAPE: 184.58079283105226 Protein: CDH3 x_train_column_count: 1 x_train columns: ['CDH3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.2585402732845947 Spearman Correlation: 0.3309265441567785 Coefficient of Determination: 0.06684307291007296 RMSE: 0.1989092319417179 NRMSE: 0.14176007521823758 MAPE: 172.41137432224951 Pearson Correlation: 0.4135532481751862 Spearman Correlation: 0.3220264591827829 Coefficient of Determination: 0.042540220994494726 RMSE: 0.20332831363960122 NRMSE: 0.18097113911351725 MAPE: 586.8030112709793 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: RandomForests Pearson Correlation: 0.3661650806172687 Spearman Correlation: 0.35439273671084043 Coefficient of Determination: 0.13219300783029397 RMSE: 0.19181791710406904 NRMSE: 0.13670618548688587 MAPE: 233.9258036788603 Pearson Correlation: 0.3409632548764403 Spearman Correlation: 0.30228083799903893 Coefficient of Determination: 0.027424343098695014 RMSE: 0.20492704927339866 NRMSE: 0.18239408412108035 MAPE: 815.7562828804256 Protein: PTEN x_train_column_count: 1 x_train columns: ['PTEN'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 0.39770673577924787 Spearman Correlation: 0.4125541754874478 Coefficient of Determination: 0.15817064768418443 RMSE: 0.5154414074592556 NRMSE: 0.09970624563975078 MAPE: 259.16907417773587 Pearson Correlation: 0.4352330047258671 Spearman Correlation: 0.4688213069988404 Coefficient of Determination: 0.15805245626297648 RMSE: 0.6841191398264946 NRMSE: 0.10696882805511604 MAPE: 602.3780358417006 Predictor: ElasticNet Pearson Correlation: 0.39770673577924787 Spearman Correlation: 0.4125541754874478 Coefficient of Determination: 0.022875863298735255 RMSE: 0.5553185009998366 NRMSE: 0.1074200133472293 MAPE: 255.34051456144576 Pearson Correlation: 0.43523300472586723 Spearman Correlation: 0.4688213069988404 Coefficient of Determination: 0.0164627947309528 RMSE: 0.7394088092038386 NRMSE: 0.11561391747382356 MAPE: 368.679731963499 Predictor: RandomForests Pearson Correlation: 0.4480104956483391 Spearman Correlation: 0.4392262058963344 Coefficient of Determination: 0.19430775807159506 RMSE: 0.5042569155059734 NRMSE: 0.09754273357822141 MAPE: 267.30505802947863 Pearson Correlation: 0.436932308042635 Spearman Correlation: 0.47224052214471246 Coefficient of Determination: 0.1541849426458075 RMSE: 0.6856886013856142 NRMSE: 0.10721422897124762 MAPE: 505.4868401346051 Protein: BRCA2 x_train_column_count: 1 x_train columns: ['BRCA2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.02188802695411087 Spearman Correlation: 0.01572029885733223 Coefficient of Determination: 0.0004790857239438395 RMSE: 0.19175131820913427 NRMSE: 0.12353120838082414 MAPE: 111.961247159937 Pearson Correlation: -0.17899779266858887 Spearman Correlation: -0.15346076634372002 Coefficient of Determination: -0.006876659817144359 RMSE: 0.20882170225143312 NRMSE: 0.20287542358612384 MAPE: 141.83179502022946 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: RandomForests Pearson Correlation: 0.29756859130815233 Spearman Correlation: 0.22793522807235775 Coefficient of Determination: 0.0436784830702307 RMSE: 0.18756179440287882 NRMSE: 0.1208322077003568 MAPE: 118.66940252409964 Pearson Correlation: -0.019302508339210173 Spearman Correlation: -0.026935047913685145 Coefficient of Determination: -0.00923731427144081 RMSE: 0.20906635350900685 NRMSE: 0.20311310830459905 MAPE: 117.40974708408407 Protein: CDKN2A x_train_column_count: 1 x_train columns: ['CDKN2A'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.5089092587161526 Spearman Correlation: 0.5043429685491743 Coefficient of Determination: 0.25898863360702407 RMSE: 0.5801540740130321 NRMSE: 0.13115272386414198 MAPE: 151.6984751149728 Pearson Correlation: 0.5446033666939745 Spearman Correlation: 0.4884824000299256 Coefficient of Determination: 0.2776884243166473 RMSE: 0.5360041640704614 NRMSE: 0.1614956806479245 MAPE: 114.74866140595384 Predictor: ElasticNet Pearson Correlation: 0.5089092587161527 Spearman Correlation: 0.5043429685491743 Coefficient of Determination: 0.037163054596823675 RMSE: 0.6613133420180523 NRMSE: 0.1495000208020916 MAPE: 271.1427747808473 Pearson Correlation: 0.5446033666939746 Spearman Correlation: 0.4884824000299256 Coefficient of Determination: 0.03400642578349122 RMSE: 0.619859119380289 NRMSE: 0.186760807285414 MAPE: 190.37084461363898 Predictor: RandomForests Pearson Correlation: 0.6315021316579708 Spearman Correlation: 0.5175085850702341 Coefficient of Determination: 0.39829848360987263 RMSE: 0.5227830094552866 NRMSE: 0.11818311505714627 MAPE: 286.8091880382585 Pearson Correlation: 0.6229828385819468 Spearman Correlation: 0.48235825210423916 Coefficient of Determination: 0.3606879562454919 RMSE: 0.5042690563417233 NRMSE: 0.1519340332454725 MAPE: 126.41263181421061 Protein: TP53 x_train_column_count: 1 x_train columns: ['TP53'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 0.33276518507002034 Spearman Correlation: 0.2833861559156332 Coefficient of Determination: 0.11073266839468476 RMSE: 0.4244667448515206 NRMSE: 0.10201075338897396 MAPE: 641.5008293378107 Pearson Correlation: 0.3834732257694103 Spearman Correlation: 0.31250015586229263 Coefficient of Determination: 0.1397396267037 RMSE: 0.40050691650465914 NRMSE: 0.12709663509287228 MAPE: 193.43090409925912 Predictor: ElasticNet Pearson Correlation: 0.33276518507002034 Spearman Correlation: 0.2833861559156332 Coefficient of Determination: 0.025240315597090168 RMSE: 0.44440228266528714 NRMSE: 0.10680179828533698 MAPE: 419.306021152465 Pearson Correlation: 0.3834732257694103 Spearman Correlation: 0.31250015586229263 Coefficient of Determination: 0.024477897169501328 RMSE: 0.42649468006176494 NRMSE: 0.13534357706961314 MAPE: 185.96914882715743 Predictor: RandomForests Pearson Correlation: 0.4344928815774183 Spearman Correlation: 0.33659916441779625 Coefficient of Determination: 0.1871563068639337 RMSE: 0.40581773432610707 NRMSE: 0.09752889553619493 MAPE: 838.6185787542784 Pearson Correlation: 0.4387149159844563 Spearman Correlation: 0.25378423849339315 Coefficient of Determination: 0.18089051627022013 RMSE: 0.3908103335422206 NRMSE: 0.12401952701898343 MAPE: 229.84517702837385 Protein: CTNNB1 x_train_column_count: 1 x_train columns: ['CTNNB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.10830589448220498 Spearman Correlation: 0.13480386712524542 Coefficient of Determination: 0.0117301667795906 RMSE: 0.7072419451207151 NRMSE: 0.17081488385680496 MAPE: 573.4555778410324 Pearson Correlation: -0.09138017300424373 Spearman Correlation: 0.03373358770059477 Coefficient of Determination: -0.16797040045743095 RMSE: 0.8672338240312909 NRMSE: 0.1823298763836706 MAPE: 970.1379641339552 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: RandomForests Pearson Correlation: 0.27073272495551043 Spearman Correlation: 0.25332746502304954 Coefficient of Determination: 0.05488063472280302 RMSE: 0.6916295995789115 NRMSE: 0.16704415022193786 MAPE: 598.8045248717256 Pearson Correlation: 0.07267382808851819 Spearman Correlation: 0.13823949839064295 Coefficient of Determination: -0.133416084696651 RMSE: 0.8543089877843627 NRMSE: 0.17961251950726656 MAPE: 916.3275962998433 Protein: CCNE1 x_train_column_count: 1 x_train columns: ['CCNE1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.7284659471489124 Spearman Correlation: 0.7105645817584747 Coefficient of Determination: 0.5306626361555623 RMSE: 0.345832377321277 NRMSE: 0.08345980098010883 MAPE: 76.12495494477345 Pearson Correlation: 0.8235508887291156 Spearman Correlation: 0.7249192633324606 Coefficient of Determination: 0.47728890438008054 RMSE: 0.32685706405279036 NRMSE: 0.13337838245849604 MAPE: 111.11211553521782 Predictor: ElasticNet Pearson Correlation: 0.7284659471489123 Spearman Correlation: 0.7105645817584747 Coefficient of Determination: 0.03609851240051165 RMSE: 0.495609258133238 NRMSE: 0.11960548739851774 MAPE: 101.98356781651003 Pearson Correlation: 0.8235508887291157 Spearman Correlation: 0.7249192633324606 Coefficient of Determination: 0.006382326787262915 RMSE: 0.4506471924042329 NRMSE: 0.18389259463161386 MAPE: 141.54779063373678 Predictor: RandomForests Pearson Correlation: 0.8558319038801104 Spearman Correlation: 0.7158571558170889 Coefficient of Determination: 0.7288377951807345 RMSE: 0.26286796528567175 NRMSE: 0.06343798182437718 MAPE: 55.5244048092431 Pearson Correlation: 0.8456838474620257 Spearman Correlation: 0.7088274541368929 Coefficient of Determination: 0.7022821756292825 RMSE: 0.24667744086523613 NRMSE: 0.10066001830785773 MAPE: 69.87901290517232 Protein: CCND1 x_train_column_count: 1 x_train columns: ['CCND1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 0.36603283831856076 Spearman Correlation: 0.3728160125831736 Coefficient of Determination: 0.13398003872754172 RMSE: 0.22363030380370164 NRMSE: 0.14287467819456795 MAPE: 537.6675814363354 Pearson Correlation: 0.601289204395813 Spearman Correlation: 0.49870696642102774 Coefficient of Determination: 0.2634898198839728 RMSE: 0.19652978093467904 NRMSE: 0.12394663277918709 MAPE: 467.70418773534425 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: RandomForests Pearson Correlation: 0.4536960474814516 Spearman Correlation: 0.39958941232777434 Coefficient of Determination: 0.2019813527443235 RMSE: 0.2146709224136968 NRMSE: 0.1371506385132421 MAPE: 504.6727797801616 Pearson Correlation: 0.5244663896500242 Spearman Correlation: 0.5018856606099847 Coefficient of Determination: 0.2568204270681399 RMSE: 0.1974176032612837 NRMSE: 0.12450656108809517 MAPE: 425.3854561538555 Protein: ERBB2 x_train_column_count: 1 x_train columns: ['ERBB2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 0.7679926094943187 Spearman Correlation: 0.6238582415521245 Coefficient of Determination: 0.589812648237893 RMSE: 0.6281778902672617 NRMSE: 0.10702044231685805 MAPE: 245.32123041369854 Pearson Correlation: 0.7633533110364072 Spearman Correlation: 0.67230847305938 Coefficient of Determination: 0.5282240041870259 RMSE: 0.712043936559668 NRMSE: 0.12821765703166854 MAPE: 138.2438757941741 Predictor: ElasticNet Pearson Correlation: 0.7679926094943187 Spearman Correlation: 0.6238582415521245 Coefficient of Determination: 0.1255394977233607 RMSE: 0.9171948622220906 NRMSE: 0.156259240203433 MAPE: 494.58396559837263 Pearson Correlation: 0.7633533110364072 Spearman Correlation: 0.67230847305938 Coefficient of Determination: 0.05393946327245469 RMSE: 1.008319894481971 NRMSE: 0.1815680294021628 MAPE: 181.7881291596889 Predictor: RandomForests Pearson Correlation: 0.837912110164944 Spearman Correlation: 0.6242468308358713 Coefficient of Determination: 0.7012149842957249 RMSE: 0.5361310018094477 NRMSE: 0.09133873993721106 MAPE: 438.3412943231485 Pearson Correlation: 0.7903040042412042 Spearman Correlation: 0.6588300179349611 Coefficient of Determination: 0.5700413694558568 RMSE: 0.6797546826519252 NRMSE: 0.12240333537147066 MAPE: 216.94371412894742 Protein: ERBB3 x_train_column_count: 1 x_train columns: ['ERBB3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.4247436800277297 Spearman Correlation: 0.47559620013365334 Coefficient of Determination: 0.18040719372349834 RMSE: 0.4324826739468878 NRMSE: 0.1182554567706047 MAPE: 212.58794848982294 Pearson Correlation: 0.32037558123944104 Spearman Correlation: 0.3203655905933989 Coefficient of Determination: 0.05473559454273036 RMSE: 0.37390758166553506 NRMSE: 0.18403952495510345 MAPE: 193.72127463105815 Predictor: ElasticNet Pearson Correlation: 0.4247436800277297 Spearman Correlation: 0.47559620013365334 Coefficient of Determination: 0.052293998830256094 RMSE: 0.4650572936414082 NRMSE: 0.12716246452642826 MAPE: 228.96221396898238 Pearson Correlation: 0.32037558123944104 Spearman Correlation: 0.3203655905933989 Coefficient of Determination: 0.04457551775447022 RMSE: 0.3759116643926464 NRMSE: 0.18502594633609118 MAPE: 211.72148713759594 Predictor: RandomForests Pearson Correlation: 0.5017575914848379 Spearman Correlation: 0.4921605147487151 Coefficient of Determination: 0.2503000193256526 RMSE: 0.41363129949439237 NRMSE: 0.11310085051484675 MAPE: 238.28030543478857 Pearson Correlation: 0.4041323955475392 Spearman Correlation: 0.32032765592468015 Coefficient of Determination: 0.13857368373267354 RMSE: 0.3569412060034264 NRMSE: 0.1756885744256825 MAPE: 237.4408613379951 Fold: 5 Protein: RB1 x_train_column_count: 1 x_train columns: ['RB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.19578397808916828 Spearman Correlation: 0.27154453701595577 Coefficient of Determination: 0.03833136607642007 RMSE: 0.22937831039834478 NRMSE: 0.11331632788682351 MAPE: 190.66146768633737 Pearson Correlation: 0.22446261577437424 Spearman Correlation: 0.28244990585917534 Coefficient of Determination: -0.04417148888267075 RMSE: 0.2456208902483007 NRMSE: 0.12384329823140022 MAPE: 394.3427181483698 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: RandomForests Pearson Correlation: 0.3145025462633167 Spearman Correlation: 0.35956151450924767 Coefficient of Determination: 0.09132386711635232 RMSE: 0.22296884509436773 NRMSE: 0.11014995583227584 MAPE: 211.2056067728131 Pearson Correlation: 0.21123097353652284 Spearman Correlation: 0.23779555867019272 Coefficient of Determination: -0.04878630534383244 RMSE: 0.24616306445127475 NRMSE: 0.12411666521351812 MAPE: 529.0921149732138 Protein: CDH1 x_train_column_count: 1 x_train columns: ['CDH1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.5196914427945497 Spearman Correlation: 0.5889053256204806 Coefficient of Determination: 0.2700791957138807 RMSE: 0.9620648244803076 NRMSE: 0.15319015707784903 MAPE: 328.0617854244586 Pearson Correlation: 0.4350739459118676 Spearman Correlation: 0.5418695993715633 Coefficient of Determination: 0.18623570683890045 RMSE: 1.0479997207832101 NRMSE: 0.2060922539936698 MAPE: 1775.0378417218953 Predictor: ElasticNet Pearson Correlation: 0.5196914427945497 Spearman Correlation: 0.5889053256204806 Coefficient of Determination: 0.07918300842227044 RMSE: 1.0805705505500411 NRMSE: 0.17205989467692764 MAPE: 255.58770538314212 Pearson Correlation: 0.43507394591186777 Spearman Correlation: 0.5418695993715633 Coefficient of Determination: 0.036901390843482984 RMSE: 1.140111246988572 NRMSE: 0.22420625887171775 MAPE: 1175.8249820693181 Predictor: RandomForests Pearson Correlation: 0.7477132730675663 Spearman Correlation: 0.5990881223566048 Coefficient of Determination: 0.5587490298670774 RMSE: 0.7480132684931943 NRMSE: 0.11910659986834722 MAPE: 166.2197926101653 Pearson Correlation: 0.616013622220581 Spearman Correlation: 0.5412740364706119 Coefficient of Determination: 0.3622554955236724 RMSE: 0.9277590822668783 NRMSE: 0.1824465757343766 MAPE: 665.3142844496236 Protein: CDH2 x_train_column_count: 1 x_train columns: ['CDH2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.13776475523400486 Spearman Correlation: 0.07886292148061753 Coefficient of Determination: 0.018979127784685246 RMSE: 0.35571203306038285 NRMSE: 0.17470263398673092 MAPE: 224.04769634015372 Pearson Correlation: 0.15378835582174144 Spearman Correlation: -0.1015076266632875 Coefficient of Determination: 0.0039633951866197 RMSE: 0.41626420394603847 NRMSE: 0.15566224929268682 MAPE: 221.01005293528254 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: RandomForests Pearson Correlation: 0.22253682981851214 Spearman Correlation: 0.23318569533283007 Coefficient of Determination: 0.045045055903606745 RMSE: 0.3509545471997903 NRMSE: 0.17236606610666974 MAPE: 516.5377300569406 Pearson Correlation: 0.02621790848994748 Spearman Correlation: 0.015572765713213336 Coefficient of Determination: -0.029644558126573406 RMSE: 0.42322867092265415 NRMSE: 0.1582666159051116 MAPE: 420.9054738110474 Protein: CDH3 x_train_column_count: 1 x_train columns: ['CDH3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.29131399778415096 Spearman Correlation: 0.34098087037844793 Coefficient of Determination: 0.08486384530498403 RMSE: 0.19492986872803375 NRMSE: 0.13675834085987662 MAPE: 331.79782210365215 Pearson Correlation: 0.2652922331797278 Spearman Correlation: 0.2942804773126847 Coefficient of Determination: 0.06608133810210592 RMSE: 0.21588497653392935 NRMSE: 0.19477347913092807 MAPE: 122.6548483564521 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: RandomForests Pearson Correlation: 0.3697002386602205 Spearman Correlation: 0.3702285475555668 Coefficient of Determination: 0.13532228695214488 RMSE: 0.18947969027848924 NRMSE: 0.13293462022119973 MAPE: 428.8692666441503 Pearson Correlation: 0.33392383751857757 Spearman Correlation: 0.2896321859679133 Coefficient of Determination: 0.1080813307623334 RMSE: 0.21097476953916952 NRMSE: 0.190343443678822 MAPE: 147.6576392773054 Protein: PTEN x_train_column_count: 1 x_train columns: ['PTEN'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 0.39159398246227695 Spearman Correlation: 0.4204847775371454 Coefficient of Determination: 0.15334584710066612 RMSE: 0.5235839613948132 NRMSE: 0.0818675570940213 MAPE: 374.001657938235 Pearson Correlation: 0.41821598782319513 Spearman Correlation: 0.428546490604621 Coefficient of Determination: 0.17098186795904924 RMSE: 0.657115104950897 NRMSE: 0.12711140222665138 MAPE: 260.87198654659664 Predictor: ElasticNet Pearson Correlation: 0.39159398246227695 Spearman Correlation: 0.4204847775371454 Coefficient of Determination: 0.018401813324226857 RMSE: 0.5637676957048873 NRMSE: 0.08815068340315647 MAPE: 277.4445584500069 Pearson Correlation: 0.4182159878231952 Spearman Correlation: 0.428546490604621 Coefficient of Determination: 0.014302672851294385 RMSE: 0.7165247975233728 NRMSE: 0.13860352784033056 MAPE: 375.9567609257773 Predictor: RandomForests Pearson Correlation: 0.4424713683162719 Spearman Correlation: 0.4429013674143712 Coefficient of Determination: 0.19271961505571344 RMSE: 0.5112643528819989 NRMSE: 0.07994126383894909 MAPE: 489.48198787226653 Pearson Correlation: 0.41212981082810396 Spearman Correlation: 0.4375929794326208 Coefficient of Determination: 0.16319084645398674 RMSE: 0.6601956321145211 NRMSE: 0.12770729497727507 MAPE: 405.69028821943914 Protein: BRCA2 x_train_column_count: 1 x_train columns: ['BRCA2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.042576883571706615 Spearman Correlation: 0.04263289576165543 Coefficient of Determination: 0.001812791014678683 RMSE: 0.2002864149428469 NRMSE: 0.12902974066216583 MAPE: 117.45509124942066 Pearson Correlation: -0.055947461482781465 Spearman Correlation: -0.039903240688786645 Coefficient of Determination: -0.10801167417699364 RMSE: 0.1748273035203661 NRMSE: 0.2286370280786845 MAPE: 113.2596902266769 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: RandomForests Pearson Correlation: 0.28059584900533835 Spearman Correlation: 0.22582466256683859 Coefficient of Determination: 0.04202793746016242 RMSE: 0.1962103509783002 NRMSE: 0.1264038337756806 MAPE: 124.03279629118732 Pearson Correlation: -0.08084835885705399 Spearman Correlation: -0.009163349322339706 Coefficient of Determination: -0.11690642357710335 RMSE: 0.1755276285743108 NRMSE: 0.22955290469405715 MAPE: 121.66442003308069 Protein: CDKN2A x_train_column_count: 1 x_train columns: ['CDKN2A'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 0.562261597610525 Spearman Correlation: 0.543492990453 Coefficient of Determination: 0.3161381041475396 RMSE: 0.5620739578150543 NRMSE: 0.14312697863946788 MAPE: 133.395167504575 Pearson Correlation: 0.3125409359562636 Spearman Correlation: 0.30912355515654816 Coefficient of Determination: -0.034290596238451876 RMSE: 0.6162510956633009 NRMSE: 0.15506683165076393 MAPE: 231.46523896428158 Predictor: ElasticNet Pearson Correlation: 0.5622615976105251 Spearman Correlation: 0.543492990453 Coefficient of Determination: 0.043614849122490695 RMSE: 0.6646999914466629 NRMSE: 0.16925975693174683 MAPE: 263.2496894992825 Pearson Correlation: 0.31254093595626364 Spearman Correlation: 0.30912355515654816 Coefficient of Determination: 0.02685403607608683 RMSE: 0.5977580167034392 NRMSE: 0.15041343114250755 MAPE: 270.43697846957156 Predictor: RandomForests Pearson Correlation: 0.6804985222571751 Spearman Correlation: 0.5578792484186119 Coefficient of Determination: 0.4625852388380224 RMSE: 0.4982692159571973 NRMSE: 0.12687968627159923 MAPE: 263.8935646704191 Pearson Correlation: 0.3800441671847586 Spearman Correlation: 0.31043525603050665 Coefficient of Determination: -0.060342568086227955 RMSE: 0.6239639730831126 NRMSE: 0.15700761759470386 MAPE: 482.2917517452506 Protein: TP53 x_train_column_count: 1 x_train columns: ['TP53'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.34436835008121686 Spearman Correlation: 0.28111369193441366 Coefficient of Determination: 0.11858956053765946 RMSE: 0.3978714775463095 NRMSE: 0.10119064003314163 MAPE: 660.7171496107318 Pearson Correlation: 0.349391187134203 Spearman Correlation: 0.3358321176074515 Coefficient of Determination: 0.10873883694515474 RMSE: 0.4986046379620052 NRMSE: 0.13354885173751313 MAPE: 164.10322763570386 Predictor: ElasticNet Pearson Correlation: 0.3443683500812168 Spearman Correlation: 0.28111369193441366 Coefficient of Determination: 0.026150149212983975 RMSE: 0.4182151033022187 NRMSE: 0.10636463371454481 MAPE: 459.81008218241675 Pearson Correlation: 0.3493911871342029 Spearman Correlation: 0.3358321176074515 Coefficient of Determination: 0.018149141532368684 RMSE: 0.5233311487872612 NRMSE: 0.14017172861584604 MAPE: 141.97900514619644 Predictor: RandomForests Pearson Correlation: 0.4315333097262984 Spearman Correlation: 0.34636829091320603 Coefficient of Determination: 0.18530224267891005 RMSE: 0.38251808431714207 NRMSE: 0.09728581202908063 MAPE: 844.9566421003476 Pearson Correlation: 0.43923064667351636 Spearman Correlation: 0.307609706668647 Coefficient of Determination: 0.17124734532602126 RMSE: 0.48080202597385313 NRMSE: 0.12878050782746836 MAPE: 184.65594885123437 Protein: CTNNB1 x_train_column_count: 1 x_train columns: ['CTNNB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.051827173721756895 Spearman Correlation: 0.07808903558350536 Coefficient of Determination: 0.0026860559359851433 RMSE: 0.754964808220002 NRMSE: 0.1484981920180964 MAPE: 681.5629059451325 Pearson Correlation: 0.16859534211479751 Spearman Correlation: 0.23237945610294397 Coefficient of Determination: 0.01568558602311365 RMSE: 0.6723219959141442 NRMSE: 0.21532287635886105 MAPE: 272.72583953479506 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: RandomForests Pearson Correlation: 0.2709132651209278 Spearman Correlation: 0.26370850559812414 Coefficient of Determination: 0.053288494500083106 RMSE: 0.7355625165488577 NRMSE: 0.14468184825902003 MAPE: 720.5866044879414 Pearson Correlation: 0.21966619098758053 Spearman Correlation: 0.2606286481137723 Coefficient of Determination: 0.03927354356881818 RMSE: 0.6642174375171072 NRMSE: 0.212727249804511 MAPE: 272.48748832271815 Protein: CCNE1 x_train_column_count: 1 x_train columns: ['CCNE1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.7385943192541283 Spearman Correlation: 0.7126097756485593 Coefficient of Determination: 0.5455215684344691 RMSE: 0.30255393165396605 NRMSE: 0.10776631581619449 MAPE: 69.0391769912328 Pearson Correlation: 0.7813741840172372 Spearman Correlation: 0.719053853539321 Coefficient of Determination: 0.2513220826076351 RMSE: 0.5607727755966646 NRMSE: 0.135331412891055 MAPE: 91.41153464276908 Predictor: ElasticNet Pearson Correlation: 0.738594319254128 Spearman Correlation: 0.7126097756485593 Coefficient of Determination: 0.007567693152254362 RMSE: 0.4470917014441189 NRMSE: 0.1592490477093923 MAPE: 111.77428568277894 Pearson Correlation: 0.7813741840172375 Spearman Correlation: 0.719053853539321 Coefficient of Determination: 0.010854312748939554 RMSE: 0.6445691866711409 NRMSE: 0.15555401855132875 MAPE: 115.23680749144577 Predictor: RandomForests Pearson Correlation: 0.8556441900853572 Spearman Correlation: 0.7114927920105991 Coefficient of Determination: 0.7307222498598404 RMSE: 0.23288761708519015 NRMSE: 0.08295195621912382 MAPE: 56.512948131727114 Pearson Correlation: 0.8005340807679645 Spearman Correlation: 0.7307358786224182 Coefficient of Determination: 0.6136504949478718 RMSE: 0.4028372194679773 NRMSE: 0.09721679162776681 MAPE: 78.43246041847577 Protein: CCND1 x_train_column_count: 1 x_train columns: ['CCND1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.41451772860371755 Spearman Correlation: 0.42726285187649277 Coefficient of Determination: 0.17182494732678533 RMSE: 0.20714246580652576 NRMSE: 0.1304686497320151 MAPE: 584.9069938579769 Pearson Correlation: 0.35899271857644904 Spearman Correlation: 0.2762503273108144 Coefficient of Determination: 0.12633820729729517 RMSE: 0.2579384860996859 NRMSE: 0.1647937581296469 MAPE: 243.89682158790058 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: RandomForests Pearson Correlation: 0.491338635402475 Spearman Correlation: 0.4512173853537595 Coefficient of Determination: 0.23817352746790288 RMSE: 0.19867174193036233 NRMSE: 0.12513336562176405 MAPE: 544.3909708292624 Pearson Correlation: 0.39141166085500984 Spearman Correlation: 0.2942353603372814 Coefficient of Determination: 0.15022210570379357 RMSE: 0.25438833306784453 NRMSE: 0.16252560858399748 MAPE: 251.6905399030386 Protein: ERBB2 x_train_column_count: 1 x_train columns: ['ERBB2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.7776877249625477 Spearman Correlation: 0.6442627066647334 Coefficient of Determination: 0.6047981975574234 RMSE: 0.6462029190492306 NRMSE: 0.11009130263032703 MAPE: 306.01343460200195 Pearson Correlation: 0.6819514367848011 Spearman Correlation: 0.5872666741480568 Coefficient of Determination: 0.46429713939097983 RMSE: 0.6350994407726499 NRMSE: 0.14052427055485117 MAPE: 204.89012646095063 Predictor: ElasticNet Pearson Correlation: 0.7776877249625477 Spearman Correlation: 0.6442627066647334 Coefficient of Determination: 0.1450022768252186 RMSE: 0.9504777094635037 NRMSE: 0.1619295210084849 MAPE: 565.9588918044528 Pearson Correlation: 0.6819514367848012 Spearman Correlation: 0.5872666741480568 Coefficient of Determination: 0.10114366891644255 RMSE: 0.8226685378325667 NRMSE: 0.18202644934894716 MAPE: 515.595693134085 Predictor: RandomForests Pearson Correlation: 0.838022725420146 Spearman Correlation: 0.6476716327438983 Coefficient of Determination: 0.7007492231903293 RMSE: 0.5623116746672499 NRMSE: 0.09579904844664121 MAPE: 556.9708624977075 Pearson Correlation: 0.7751002688381805 Spearman Correlation: 0.5803322760177033 Coefficient of Determination: 0.5949869104508938 RMSE: 0.552222728245644 NRMSE: 0.12218668619219915 MAPE: 295.855146905497 Protein: ERBB3 x_train_column_count: 1 x_train columns: ['ERBB3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.3773884363248901 Spearman Correlation: 0.41142820549776254 Coefficient of Determination: 0.14242203187174562 RMSE: 0.43423667161575774 NRMSE: 0.11718801437220049 MAPE: 211.57021337384987 Pearson Correlation: 0.5207896565156246 Spearman Correlation: 0.5619845633985462 Coefficient of Determination: 0.23145517366475354 RMSE: 0.3655433086618584 NRMSE: 0.17686096101384646 MAPE: 189.66787865486225 Predictor: ElasticNet Pearson Correlation: 0.3773884363248901 Spearman Correlation: 0.41142820549776254 Coefficient of Determination: 0.04050378060667925 RMSE: 0.4593157350355365 NRMSE: 0.12395613377939546 MAPE: 241.4756185728408 Pearson Correlation: 0.5207896565156246 Spearman Correlation: 0.5619845633985462 Coefficient of Determination: 0.008092447027275074 RMSE: 0.4152788712398118 NRMSE: 0.2009245375741769 MAPE: 230.8356588688801 Predictor: RandomForests Pearson Correlation: 0.46247361973981643 Spearman Correlation: 0.42563267771628494 Coefficient of Determination: 0.21289293377250285 RMSE: 0.41601270604680346 NRMSE: 0.1122698891225144 MAPE: 251.7081601814871 Pearson Correlation: 0.54545299417486 Spearman Correlation: 0.5588239281487987 Coefficient of Determination: 0.26905084709705074 RMSE: 0.3564903845876662 NRMSE: 0.172480881242702 MAPE: 218.39049140103648
TMM
scenario = Scenario.selfmRNA
normalizeTechnique = NormalizeTechnique.TMM
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12.2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 6.676054 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SH-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SJ-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SK-01 | 6.676054 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SQ-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 1 x_train columns: ['RB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4586671617244917e-06 RMSE: 0.22410209624831526 NRMSE: 0.08487108360095257 MAPE: 241.53718297565408 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03536434267028454 RMSE: 0.28538241670885023 NRMSE: 0.14098319692369454 MAPE: 138.84023518029005 Protein: CDH1 x_train_column_count: 1 x_train columns: ['CDH1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.620371981620906e-07 RMSE: 1.1284316492288855 NRMSE: 0.18967469269138984 MAPE: 492.645061276289 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.5685973011002616e-05 RMSE: 1.1603202144047338 NRMSE: 0.18793045486131543 MAPE: 303.91159481027046 Protein: CDH2 x_train_column_count: 1 x_train columns: ['CDH2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.0021369891684559924 Spearman Correlation: 0.017615519581153163 Coefficient of Determination: 4.566722706211834e-06 RMSE: 0.3711936150500221 NRMSE: 0.1371301965184963 MAPE: 486.16457117387233 Pearson Correlation: -0.07468445577572305 Spearman Correlation: -0.05435078876471117 Coefficient of Determination: -0.0005919242071077413 RMSE: 0.37522599375715276 NRMSE: 0.19364503987054382 MAPE: 105.14910145406739 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: RandomForests Pearson Correlation: 0.002136989168455994 Spearman Correlation: 0.017615519581153163 Coefficient of Determination: -3.418287103240658e-05 RMSE: 0.37120080681408685 NRMSE: 0.13713285337459385 MAPE: 554.0742535696029 Pearson Correlation: -0.07468445577572307 Spearman Correlation: -0.05435078876471117 Coefficient of Determination: -0.0015171950953063451 RMSE: 0.3753994438193196 NRMSE: 0.19373455324318503 MAPE: 104.64344861322338 Protein: CDH3 x_train_column_count: 1 x_train columns: ['CDH3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.0332742183848046 Spearman Correlation: 0.03614715515223192 Coefficient of Determination: 0.001107173609119494 RMSE: 0.2086841518464814 NRMSE: 0.14640803154745566 MAPE: 120.97174512102828 Pearson Correlation: 0.094035834754077 Spearman Correlation: 0.12192115267996365 Coefficient of Determination: 0.0046657036396693385 RMSE: 0.20410151431298112 NRMSE: 0.156218868828391 MAPE: 110.86094686356913 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: RandomForests Pearson Correlation: 0.033274218384804516 Spearman Correlation: 0.03614715515223192 Coefficient of Determination: 0.0010884817975662653 RMSE: 0.20868610434152873 NRMSE: 0.14640940137335742 MAPE: 125.6606466015733 Pearson Correlation: 0.094035834754077 Spearman Correlation: 0.12192115267996365 Coefficient of Determination: 0.004470106776378935 RMSE: 0.20412156770360806 NRMSE: 0.15623421765130618 MAPE: 114.0301428982097 Protein: PTEN x_train_column_count: 1 x_train columns: ['PTEN'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.084012675889312e-05 RMSE: 0.6264775189448863 NRMSE: 0.09795598763894713 MAPE: 362.9024059037294 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00931343877205526 RMSE: 0.4989738155072401 NRMSE: 0.16444987657611235 MAPE: 166.61441984426253 Protein: BRCA2 x_train_column_count: 1 x_train columns: ['BRCA2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.0013582759692855719 Spearman Correlation: 0.0045127773595330205 Coefficient of Determination: 1.844913608550769e-06 RMSE: 0.19761104456435807 NRMSE: 0.12783243279750953 MAPE: 122.29510289227173 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004671472950302569 RMSE: 0.1851656556042455 NRMSE: 0.18531390672962922 MAPE: 104.08974723263387 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: RandomForests Pearson Correlation: -0.0013582759692855667 Spearman Correlation: -0.0045127773595330205 Coefficient of Determination: -5.103360456315542e-05 RMSE: 0.1976162691945358 NRMSE: 0.12783581255387666 MAPE: 121.64943148020942 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0044694795588478 RMSE: 0.18514704050472214 NRMSE: 0.18529527672610305 MAPE: 103.89824617718904 Protein: CDKN2A x_train_column_count: 1 x_train columns: ['CDKN2A'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 0.12205587192740314 Spearman Correlation: 0.09815289996372449 Coefficient of Determination: 0.014897635871958692 RMSE: 0.6379093075460354 NRMSE: 0.14420917995841195 MAPE: 212.98747776068043 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00895833232325316 RMSE: 0.7502027765536693 NRMSE: 0.20259324238554396 MAPE: 452.97376972588427 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: RandomForests Pearson Correlation: 0.12205587192740315 Spearman Correlation: 0.09815289996372449 Coefficient of Determination: 0.014736514250158206 RMSE: 0.6379614730790857 NRMSE: 0.1442209727770059 MAPE: 212.39752380050172 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009104287408230993 RMSE: 0.750257036450676 NRMSE: 0.20260789534179746 MAPE: 451.6787954130565 Protein: TP53 x_train_column_count: 1 x_train columns: ['TP53'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1903553747139028e-06 RMSE: 0.452819839726163 NRMSE: 0.1088247632122478 MAPE: 386.5884091131444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002297937310716147 RMSE: 0.4211206095598197 NRMSE: 0.15143320851516406 MAPE: 447.70899049367625 Protein: CTNNB1 x_train_column_count: 1 x_train columns: ['CTNNB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4879440155768364e-05 RMSE: 0.7372406509033639 NRMSE: 0.14858630124823427 MAPE: 660.6430832277092 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01763093169040486 RMSE: 0.7575488846283525 NRMSE: 0.1879494081844769 MAPE: 324.6682321626286 Protein: CCNE1 x_train_column_count: 1 x_train columns: ['CCNE1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.05192687436768527 Spearman Correlation: 0.08469515587880291 Coefficient of Determination: 0.0026964002815972332 RMSE: 0.48301863463960504 NRMSE: 0.11656698955995971 MAPE: 119.57622269129114 Pearson Correlation: 0.13599169774339417 Spearman Correlation: 0.14852213144650117 Coefficient of Determination: 0.0028745294958597567 RMSE: 0.5362675951399198 NRMSE: 0.19101250049507384 MAPE: 84.94775004924556 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: RandomForests Pearson Correlation: 0.0519268743676854 Spearman Correlation: 0.08469515587880291 Coefficient of Determination: 0.002677908495351544 RMSE: 0.4830231126320359 NRMSE: 0.11656807023482296 MAPE: 119.43099809926774 Pearson Correlation: 0.13599169774339412 Spearman Correlation: 0.14852213144650117 Coefficient of Determination: 0.0028608284115207994 RMSE: 0.5362712794417089 NRMSE: 0.19101381280203344 MAPE: 84.89477575649545 Protein: CCND1 x_train_column_count: 1 x_train columns: ['CCND1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -6.730879370375753e-05 RMSE: 0.2389020462082785 NRMSE: 0.14362100143576398 MAPE: 403.29824986195 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011305560546988058 RMSE: 0.23508009298681884 NRMSE: 0.16742642369866306 MAPE: 1303.705037451208 Protein: ERBB2 x_train_column_count: 1 x_train columns: ['ERBB2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.306520477419639e-07 RMSE: 1.0191372509121606 NRMSE: 0.1736268039102783 MAPE: 624.5447295898225 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02360779143819025 RMSE: 0.917684642000512 NRMSE: 0.17016218097543334 MAPE: 535.0245009023646 Protein: ERBB3 x_train_column_count: 1 x_train columns: ['ERBB3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.989157152326726e-06 RMSE: 0.4591385838048939 NRMSE: 0.12390832574677273 MAPE: 216.81400220250083 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006459820720205345 RMSE: 0.4670202437926927 NRMSE: 0.18739577065384752 MAPE: 254.76019735334017 Fold: 2 Protein: RB1 x_train_column_count: 1 x_train columns: ['RB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4263644985135215e-06 RMSE: 0.23504130551959493 NRMSE: 0.08595717726725971 MAPE: 192.00946551468715 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.018558302852048847 RMSE: 0.24716609205685758 NRMSE: 0.14160837624002107 MAPE: 242.315163337212 Protein: CDH1 x_train_column_count: 1 x_train columns: ['CDH1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.109525118891952e-06 RMSE: 1.1205979541487452 NRMSE: 0.17977026616647873 MAPE: 436.94910044840896 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08681768836146286 RMSE: 1.1995275824231637 NRMSE: 0.21302212438699408 MAPE: 200.04996276284982 Protein: CDH2 x_train_column_count: 1 x_train columns: ['CDH2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.009663749213899678 Spearman Correlation: -0.0177629408302383 Coefficient of Determination: 9.338804886926955e-05 RMSE: 0.368081097783783 NRMSE: 0.13337238125363543 MAPE: 309.95271378122334 Pearson Correlation: 0.02187301763577879 Spearman Correlation: 0.025908433760141823 Coefficient of Determination: 0.0001912899750754482 RMSE: 0.38704335329434714 NRMSE: 0.20390341923765898 MAPE: 139.1398884017298 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: RandomForests Pearson Correlation: 0.009663749213899685 Spearman Correlation: -0.0177629408302383 Coefficient of Determination: 8.400939737418511e-05 RMSE: 0.368082823993112 NRMSE: 0.133373006737123 MAPE: 278.842964167499 Pearson Correlation: 0.021873017635778775 Spearman Correlation: 0.025908433760141823 Coefficient of Determination: 0.00012595398596160212 RMSE: 0.3870559994370275 NRMSE: 0.2039100815190565 MAPE: 137.28327214608532 Protein: CDH3 x_train_column_count: 1 x_train columns: ['CDH3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.06738082015698493 Spearman Correlation: 0.08466348301281183 Coefficient of Determination: 0.004540174925028007 RMSE: 0.2072346578051733 NRMSE: 0.1559644606542889 MAPE: 125.3864828576317 Pearson Correlation: -0.0018740833425367144 Spearman Correlation: -0.01573359444137587 Coefficient of Determination: -0.15835305689297252 RMSE: 0.21302305300322263 NRMSE: 0.17528433555765874 MAPE: 245.8981886064408 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: RandomForests Pearson Correlation: 0.06738082015698496 Spearman Correlation: 0.08466348301281183 Coefficient of Determination: 0.004533997306119142 RMSE: 0.2072353008320048 NRMSE: 0.1559649445952186 MAPE: 123.88130487089018 Pearson Correlation: -0.0018740833425367124 Spearman Correlation: -0.01573359444137587 Coefficient of Determination: -0.15623249348827883 RMSE: 0.21282797611406923 NRMSE: 0.1751238180811892 MAPE: 239.13735110965297 Protein: PTEN x_train_column_count: 1 x_train columns: ['PTEN'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -7.039401497710429e-06 RMSE: 0.6237518167450345 NRMSE: 0.09752979700493074 MAPE: 269.1438133361505 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0008608489591892532 RMSE: 0.5118503361882523 NRMSE: 0.17166968613772884 MAPE: 475.20963201938855 Protein: BRCA2 x_train_column_count: 1 x_train columns: ['BRCA2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.009933491753276088 Spearman Correlation: 0.014210354271543182 Coefficient of Determination: 9.867425841236788e-05 RMSE: 0.19531475845841614 NRMSE: 0.12582686967847714 MAPE: 126.02078257366358 Pearson Correlation: 0.00274837604986772 Spearman Correlation: 0.0 Coefficient of Determination: -0.018451357377476718 RMSE: 0.19496189645368078 NRMSE: 0.1319690904900603 MAPE: 116.13232696473223 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: RandomForests Pearson Correlation: 0.00993349175327608 Spearman Correlation: 0.014210354271543182 Coefficient of Determination: 8.185192399379204e-05 RMSE: 0.19531640143871817 NRMSE: 0.1258279281293079 MAPE: 126.13259218459578 Pearson Correlation: 0.0027483760498677274 Spearman Correlation: 0.0 Coefficient of Determination: -0.017646761303319325 RMSE: 0.19488486942175295 NRMSE: 0.1319169511360041 MAPE: 116.16847352037934 Protein: CDKN2A x_train_column_count: 1 x_train columns: ['CDKN2A'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.08749880693798538 Spearman Correlation: 0.07060057337552438 Coefficient of Determination: 0.00765604121557073 RMSE: 0.6608008261969515 NRMSE: 0.14938415874238756 MAPE: 295.5390808396542 Pearson Correlation: 0.162723938679865 Spearman Correlation: 0.14187188675486676 Coefficient of Determination: 0.020499309278675937 RMSE: 0.6664941220232903 NRMSE: 0.18005568457512705 MAPE: 248.80758667187348 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: RandomForests Pearson Correlation: 0.08749880693798534 Spearman Correlation: 0.07060057337552438 Coefficient of Determination: 0.0074218560542410605 RMSE: 0.6608787934268995 NRMSE: 0.1494017844301796 MAPE: 294.1409517475651 Pearson Correlation: 0.16272393867986507 Spearman Correlation: 0.14187188675486676 Coefficient of Determination: 0.018250019947868457 RMSE: 0.6672589394845054 NRMSE: 0.18026230264872095 MAPE: 248.00886094999836 Protein: TP53 x_train_column_count: 1 x_train columns: ['TP53'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -7.5504254730685005e-06 RMSE: 0.4553240341430601 NRMSE: 0.12195635037982058 MAPE: 272.77988828754343 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004972231030332841 RMSE: 0.4103999979856238 NRMSE: 0.13515560612073893 MAPE: 936.2702607021621 Protein: CTNNB1 x_train_column_count: 1 x_train columns: ['CTNNB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1971875713001623e-08 RMSE: 0.7249835911455516 NRMSE: 0.1426010210750495 MAPE: 628.1369268804478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11732463794073467 RMSE: 0.8102540736943942 NRMSE: 0.2016510474339599 MAPE: 279.25170246839326 Protein: CCNE1 x_train_column_count: 1 x_train columns: ['CCNE1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.07420730450328121 Spearman Correlation: 0.0996840207349156 Coefficient of Determination: 0.005506724041642652 RMSE: 0.5113830198204319 NRMSE: 0.12341217265256459 MAPE: 119.09086859036553 Pearson Correlation: 0.06574685842975651 Spearman Correlation: 0.10418716683560529 Coefficient of Determination: 0.0027256573226791536 RMSE: 0.41770290133623245 NRMSE: 0.22701368014838802 MAPE: 82.14484526974964 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: RandomForests Pearson Correlation: 0.07420730450328139 Spearman Correlation: 0.0996840207349156 Coefficient of Determination: 0.005453640118453951 RMSE: 0.511396667904013 NRMSE: 0.12341546634747036 MAPE: 118.86223438781687 Pearson Correlation: 0.06574685842975653 Spearman Correlation: 0.10418716683560529 Coefficient of Determination: 0.0033666135664930374 RMSE: 0.41756864925384035 NRMSE: 0.22694071666359078 MAPE: 82.03254494672801 Protein: CCND1 x_train_column_count: 1 x_train columns: ['CCND1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.97203800434265e-05 RMSE: 0.23875113536941006 NRMSE: 0.14353027820358663 MAPE: 623.0252662656405 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002702257656317375 RMSE: 0.23574750143052878 NRMSE: 0.18238805272523426 MAPE: 416.53723258036024 Protein: ERBB2 x_train_column_count: 1 x_train columns: ['ERBB2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4560613754488472e-05 RMSE: 0.9830158815454965 NRMSE: 0.17641115545564603 MAPE: 400.90644503187656 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008478449779226516 RMSE: 1.0616738552038782 NRMSE: 0.18087361452951228 MAPE: 1326.1075521313205 Protein: ERBB3 x_train_column_count: 1 x_train columns: ['ERBB3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -7.296729507277888e-07 RMSE: 0.44513322107520426 NRMSE: 0.12012868032265928 MAPE: 216.7226642402447 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003138473719825896 RMSE: 0.5178567313325867 NRMSE: 0.19111995960000838 MAPE: 281.4593255894813 Fold: 3 Protein: RB1 x_train_column_count: 1 x_train columns: ['RB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658656 RMSE: 0.22504849506851243 NRMSE: 0.15791325418450988 MAPE: 179.58000583439403 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9251142089338202e-05 RMSE: 0.24058346095584196 NRMSE: 0.08798400415295567 MAPE: 209.8403217597603 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.029112616313034634 RMSE: 0.22486854838603798 NRMSE: 0.15778698821592121 MAPE: 175.78781390152616 Protein: CDH1 x_train_column_count: 1 x_train columns: ['CDH1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085638 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.3579198055234 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -8.038036049451414e-05 RMSE: 1.1747556244380437 NRMSE: 0.18705704029139894 MAPE: 559.5420968885569 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05064331478686768 RMSE: 0.9650867846881294 NRMSE: 0.18973121233989884 MAPE: 299.4500741482848 Protein: CDH2 x_train_column_count: 1 x_train columns: ['CDH2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.013144969141628193 Spearman Correlation: -0.006753794768230431 Coefficient of Determination: 0.00017279021373428627 RMSE: 0.3812050282217035 NRMSE: 0.13812777310736413 MAPE: 134.2029506087419 Pearson Correlation: 0.0073672732940825575 Spearman Correlation: 0.009670338274985611 Coefficient of Determination: -0.002383453506540789 RMSE: 0.3323738305317345 NRMSE: 0.1751290021137978 MAPE: 637.2640224772792 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: RandomForests Pearson Correlation: 0.013144969141628216 Spearman Correlation: -0.006753794768230431 Coefficient of Determination: 0.00017054406448901993 RMSE: 0.3812054564171442 NRMSE: 0.13812792826188283 MAPE: 155.66629715298168 Pearson Correlation: 0.007367273294082566 Spearman Correlation: 0.009670338274985611 Coefficient of Determination: -0.0024722291997434365 RMSE: 0.3323885484841413 NRMSE: 0.17513675705742265 MAPE: 634.0131443807717 Protein: CDH3 x_train_column_count: 1 x_train columns: ['CDH3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.0472518830270131 Spearman Correlation: 0.053564309919690634 Coefficient of Determination: 0.002232740449598425 RMSE: 0.21227333005541227 NRMSE: 0.1489261169496915 MAPE: 110.36312071546426 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028329773341648767 RMSE: 0.1885948471283318 NRMSE: 0.16404259233374083 MAPE: 99.73558456427553 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: RandomForests Pearson Correlation: 0.047251883027013115 Spearman Correlation: 0.053564309919690634 Coefficient of Determination: 0.002224420555647977 RMSE: 0.21227421507538866 NRMSE: 0.14892673785948018 MAPE: 113.75195177449282 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0025016608794410367 RMSE: 0.18856369052533004 NRMSE: 0.1640154918588204 MAPE: 100.09430668977957 Protein: PTEN x_train_column_count: 1 x_train columns: ['PTEN'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107039 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.3419559188896386e-06 RMSE: 0.6292953701743222 NRMSE: 0.09839658668975408 MAPE: 302.4002823083477 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06220027117065996 RMSE: 0.4853843427917682 NRMSE: 0.11604847290961799 MAPE: 95.26027671741345 Protein: BRCA2 x_train_column_count: 1 x_train columns: ['BRCA2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.0013919610646360304 Spearman Correlation: 0.005062699493336157 Coefficient of Determination: 1.9375556051803855e-06 RMSE: 0.1900499647376551 NRMSE: 0.1280901819330164 MAPE: 119.56617501486065 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036649163825406283 RMSE: 0.21452344730375503 NRMSE: 0.14755136035309072 MAPE: 115.4438744412544 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: RandomForests Pearson Correlation: -0.0013919610646360295 Spearman Correlation: -0.005062699493336157 Coefficient of Determination: -6.364934274283307e-05 RMSE: 0.19005619704140198 NRMSE: 0.1280943823911533 MAPE: 118.5639808796393 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0033973031901091133 RMSE: 0.21449484556078072 NRMSE: 0.14753168778984704 MAPE: 114.4327136067381 Protein: CDKN2A x_train_column_count: 1 x_train columns: ['CDKN2A'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.07449243162145305 Spearman Correlation: 0.06902697312624104 Coefficient of Determination: 0.005549122368876946 RMSE: 0.6657332232484783 NRMSE: 0.15542893706772468 MAPE: 311.91171996458166 Pearson Correlation: 0.20328513940094914 Spearman Correlation: 0.14682952634209145 Coefficient of Determination: 0.02776135708741667 RMSE: 0.6473638336190096 NRMSE: 0.19985916878732043 MAPE: 177.38446802752986 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: RandomForests Pearson Correlation: 0.07449243162145311 Spearman Correlation: 0.06902697312624104 Coefficient of Determination: 0.005427260142017776 RMSE: 0.6657740122153659 NRMSE: 0.15543846008016574 MAPE: 310.4155764284463 Pearson Correlation: 0.20328513940094914 Spearman Correlation: 0.14682952634209145 Coefficient of Determination: 0.024503574046781718 RMSE: 0.6484475218674116 NRMSE: 0.2001937334035416 MAPE: 176.83385863323122 Protein: TP53 x_train_column_count: 1 x_train columns: ['TP53'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01054681355560061 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.1664679141391 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.127886026492831e-06 RMSE: 0.45011328478522344 NRMSE: 0.10817430540380281 MAPE: 384.97620402785606 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010235836874693982 RMSE: 0.4326457281494117 NRMSE: 0.16133323693246113 MAPE: 262.48262286795716 Protein: CTNNB1 x_train_column_count: 1 x_train columns: ['CTNNB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.3651813305723977e-05 RMSE: 0.7692103826358508 NRMSE: 0.15130023261916817 MAPE: 448.4586738716637 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010039645692692112 RMSE: 0.6160396894843083 NRMSE: 0.20139255597904746 MAPE: 1395.83653435531 Protein: CCNE1 x_train_column_count: 1 x_train columns: ['CCNE1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.07188063701483931 Spearman Correlation: 0.0958698472887527 Coefficient of Determination: 0.005166825977659162 RMSE: 0.5210715984790001 NRMSE: 0.12575031939546785 MAPE: 105.46603095542464 Pearson Correlation: 0.07812502788834247 Spearman Correlation: 0.11992946044735714 Coefficient of Determination: -0.005811596589553103 RMSE: 0.3659473891376678 NRMSE: 0.1594055796217571 MAPE: 132.76791733181105 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: RandomForests Pearson Correlation: 0.07188063701483922 Spearman Correlation: 0.0958698472887527 Coefficient of Determination: 0.0051539529043052035 RMSE: 0.5210749697835492 NRMSE: 0.12575113299310983 MAPE: 105.51207161524754 Pearson Correlation: 0.0781250278883424 Spearman Correlation: 0.11992946044735714 Coefficient of Determination: -0.005111566061356543 RMSE: 0.36582001988982876 NRMSE: 0.1593500979613315 MAPE: 132.84961543133034 Protein: CCND1 x_train_column_count: 1 x_train columns: ['CCND1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796535 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.97448412250054 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.4116478916667035e-06 RMSE: 0.24465690258910402 NRMSE: 0.14708065466875717 MAPE: 622.5870209040851 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0008938093409120995 RMSE: 0.20983330328280636 NRMSE: 0.19883193245980532 MAPE: 469.34659613783066 Protein: ERBB2 x_train_column_count: 1 x_train columns: ['ERBB2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865389 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792789 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -8.15820629518349e-06 RMSE: 0.9812390210263281 NRMSE: 0.16717021671062032 MAPE: 598.5939208181778 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004188610298379913 RMSE: 1.068772470679015 NRMSE: 0.19279393727523902 MAPE: 269.63060457851583 Protein: ERBB3 x_train_column_count: 1 x_train columns: ['ERBB3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9170159786252583e-06 RMSE: 0.45100481929229386 NRMSE: 0.16353374861479833 MAPE: 235.79472521493977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014658626088311477 RMSE: 0.498334532216317 NRMSE: 0.1385513400198282 MAPE: 160.9258353666711 Fold: 4 Protein: RB1 x_train_column_count: 1 x_train columns: ['RB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735625 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.4098473865530323e-05 RMSE: 0.25151386894767247 NRMSE: 0.09198137395687261 MAPE: 141.616178993359 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07599103874721358 RMSE: 0.1710324408043952 NRMSE: 0.16386812632161424 MAPE: 100.2445075488262 Protein: CDH1 x_train_column_count: 1 x_train columns: ['CDH1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.7425755644024 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -7.574853195158049e-05 RMSE: 1.1190536846804813 NRMSE: 0.17818758712787508 MAPE: 563.4401015673177 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0697766676219389 RMSE: 1.206456359084116 NRMSE: 0.21887020773631508 MAPE: 378.45418640238364 Protein: CDH2 x_train_column_count: 1 x_train columns: ['CDH2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.03004966730173431 Spearman Correlation: 0.021327840093619946 Coefficient of Determination: 0.0009029825049449158 RMSE: 0.3791922171900172 NRMSE: 0.1373984408978974 MAPE: 503.3332546571895 Pearson Correlation: -0.06782633649554902 Spearman Correlation: -0.10354765953166792 Coefficient of Determination: -0.06296511830829665 RMSE: 0.3435989756364615 NRMSE: 0.17725175170053933 MAPE: 138.48717374722776 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: RandomForests Pearson Correlation: 0.030049667301734306 Spearman Correlation: 0.021327840093619946 Coefficient of Determination: 0.000901864240836936 RMSE: 0.3791924294001031 NRMSE: 0.13739851779118165 MAPE: 512.552755472322 Pearson Correlation: -0.06782633649554894 Spearman Correlation: -0.10354765953166792 Coefficient of Determination: -0.06262986529635794 RMSE: 0.3435447868048161 NRMSE: 0.1772237974107631 MAPE: 139.2481725997938 Protein: CDH3 x_train_column_count: 1 x_train columns: ['CDH3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.03763546790459483 Spearman Correlation: 0.04346736260721379 Coefficient of Determination: 0.0014164284443977104 RMSE: 0.20576419558815062 NRMSE: 0.14664552046706003 MAPE: 180.26293980163487 Pearson Correlation: 0.08073549283252746 Spearman Correlation: 0.10423775534209546 Coefficient of Determination: -0.09670229619265602 RMSE: 0.21761156160945508 NRMSE: 0.19368385781499103 MAPE: 213.17268307934648 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: RandomForests Pearson Correlation: 0.03763546790459478 Spearman Correlation: 0.04346736260721379 Coefficient of Determination: 0.001389430234007727 RMSE: 0.20576697714176978 NRMSE: 0.14664750284488345 MAPE: 185.76105937028902 Pearson Correlation: 0.08073549283252739 Spearman Correlation: 0.10423775534209546 Coefficient of Determination: -0.10001564080346803 RMSE: 0.21794003649847146 NRMSE: 0.19397621490865605 MAPE: 220.31985171364403 Protein: PTEN x_train_column_count: 1 x_train columns: ['PTEN'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.3515784225723877e-06 RMSE: 0.5617822327435491 NRMSE: 0.10867034833324611 MAPE: 275.23235997653785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011889288820654542 RMSE: 0.7456156921871908 NRMSE: 0.11658442532830753 MAPE: 434.68040701520795 Protein: BRCA2 x_train_column_count: 1 x_train columns: ['BRCA2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.002407409458404583 Spearman Correlation: 0.007152067813778633 Coefficient of Determination: 5.795620300119708e-06 RMSE: 0.1917967115866645 NRMSE: 0.12356045198045709 MAPE: 107.42011752237897 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.5313912242742589e-06 RMSE: 0.20810754567064893 NRMSE: 0.20218160288994466 MAPE: 135.68628697518574 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: RandomForests Pearson Correlation: -0.002407409458404594 Spearman Correlation: -0.007152067813778633 Coefficient of Determination: -0.00010133005259027605 RMSE: 0.19180698454697903 NRMSE: 0.12356707008985604 MAPE: 105.6400888342812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.869184616025258e-05 RMSE: 0.20811349333754217 NRMSE: 0.2021873811947248 MAPE: 128.85278659931006 Protein: CDKN2A x_train_column_count: 1 x_train columns: ['CDKN2A'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.11733892095594277 Spearman Correlation: 0.098119935909109 Coefficient of Determination: 0.013768422371104871 RMSE: 0.6692992886510427 NRMSE: 0.15130536648605009 MAPE: 289.21213309550114 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014294563310142117 RMSE: 0.6311259785098089 NRMSE: 0.19015546203971345 MAPE: 201.31691574449397 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: RandomForests Pearson Correlation: 0.11733892095594302 Spearman Correlation: 0.098119935909109 Coefficient of Determination: 0.013766997704653283 RMSE: 0.6692997720709208 NRMSE: 0.15130547577052578 MAPE: 288.3056038367429 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015204269220872035 RMSE: 0.6311546438337229 NRMSE: 0.19016409877484872 MAPE: 200.79083177774612 Protein: TP53 x_train_column_count: 1 x_train columns: ['TP53'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.43234050149056136 NRMSE: 0.1371986866877892 MAPE: 185.65040333639752 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.1531098099613075e-05 RMSE: 0.45012625834621206 NRMSE: 0.10817742329877725 MAPE: 427.72581172445143 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019027794096784234 RMSE: 0.4322229787940365 NRMSE: 0.13716139210270262 MAPE: 188.46285720066712 Protein: CTNNB1 x_train_column_count: 1 x_train columns: ['CTNNB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 2.220446049250313e-16 RMSE: 0.7114268313676597 NRMSE: 0.17182562828897202 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287339 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.336102732056425e-05 RMSE: 0.7114458123477446 NRMSE: 0.1718302126238394 MAPE: 637.4091255030693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.15602567556949265 RMSE: 0.862787867807884 NRMSE: 0.1813951450273072 MAPE: 938.6635184615642 Protein: CCNE1 x_train_column_count: 1 x_train columns: ['CCNE1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.08084021092875135 Spearman Correlation: 0.11465904194219208 Coefficient of Determination: 0.0065351397030049 RMSE: 0.5031521588637752 NRMSE: 0.12142581723188821 MAPE: 102.5896262704943 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01772084420757869 RMSE: 0.45608033884774973 NRMSE: 0.18610966246949717 MAPE: 142.19674715932254 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: RandomForests Pearson Correlation: 0.08084021092875132 Spearman Correlation: 0.11465904194219208 Coefficient of Determination: 0.006534968139914943 RMSE: 0.5031522023088626 NRMSE: 0.12142582771650037 MAPE: 102.5747169230077 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017833558037302133 RMSE: 0.45610559387651795 NRMSE: 0.18611996812067166 MAPE: 142.1703617155453 Protein: CCND1 x_train_column_count: 1 x_train columns: ['CCND1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443612 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422969 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -7.578650524475705e-06 RMSE: 0.2403080660151938 NRMSE: 0.15352989740432257 MAPE: 631.7406717684042 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015018985732184742 RMSE: 0.22917375541492033 NRMSE: 0.14453440679548457 MAPE: 486.008501755422 Protein: ERBB2 x_train_column_count: 1 x_train columns: ['ERBB2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 2.220446049250313e-16 RMSE: 0.9808249714864397 NRMSE: 0.16709967655696878 MAPE: 529.9728174248763 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556381 RMSE: 1.0777663077969097 NRMSE: 0.1940732358189415 MAPE: 193.89691794375835 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.136696957366624e-06 RMSE: 0.9808260193487461 NRMSE: 0.16709985507755867 MAPE: 527.2581033665992 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0816534943576046 RMSE: 1.0781593445925315 NRMSE: 0.19414400990249783 MAPE: 193.10766728184439 Protein: ERBB3 x_train_column_count: 1 x_train columns: ['ERBB3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -8.109459215255299e-08 RMSE: 0.477715862467629 NRMSE: 0.13062374732174947 MAPE: 235.40564654781124 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.000489096718886195 RMSE: 0.384674855326909 NRMSE: 0.1893392407856143 MAPE: 219.75997191205136 Fold: 5 Protein: RB1 x_train_column_count: 1 x_train columns: ['RB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.0260396834160801e-05 RMSE: 0.23390626370573805 NRMSE: 0.11555320477699571 MAPE: 103.42314068679886 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11639433248952269 RMSE: 0.25397337914995716 NRMSE: 0.1280546654851245 MAPE: 122.26566295301933 Protein: CDH1 x_train_column_count: 1 x_train columns: ['CDH1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.3146300431226 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.7793375302988 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010807252483369112 RMSE: 1.1261336384065677 NRMSE: 0.17931493239173396 MAPE: 272.91326398306535 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01464370336783083 RMSE: 1.1702230127671565 NRMSE: 0.2301278269389307 MAPE: 1099.0733237968934 Protein: CDH2 x_train_column_count: 1 x_train columns: ['CDH2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.01064185744571173 Spearman Correlation: 0.0015351265807716104 Coefficient of Determination: 0.00011324912989463254 RMSE: 0.35911607015829056 NRMSE: 0.17637447579111562 MAPE: 198.29205217125093 Pearson Correlation: 0.011164952153692375 Spearman Correlation: -0.04761525104101502 Coefficient of Determination: -0.015206121994345123 RMSE: 0.42025078209038663 NRMSE: 0.15715303258619998 MAPE: 210.32172713725942 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: RandomForests Pearson Correlation: 0.01064185744571171 Spearman Correlation: 0.0015351265807716104 Coefficient of Determination: 0.00010973482168841198 RMSE: 0.35911670125148304 NRMSE: 0.1763747857430789 MAPE: 194.01817192416001 Pearson Correlation: 0.011164952153692374 Spearman Correlation: -0.04761525104101502 Coefficient of Determination: -0.015607223364809686 RMSE: 0.42033379307442126 NRMSE: 0.15718407459357975 MAPE: 232.99420442831806 Protein: CDH3 x_train_column_count: 1 x_train columns: ['CDH3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.03817002397504604 Spearman Correlation: 0.04026301793399473 Coefficient of Determination: 0.001456950730255424 RMSE: 0.20361929527354353 NRMSE: 0.14285464393103744 MAPE: 143.03156795735265 Pearson Correlation: 0.05682417457895163 Spearman Correlation: 0.057279399409552734 Coefficient of Determination: -0.0031999265358222395 RMSE: 0.2237492765352678 NRMSE: 0.2018687253902217 MAPE: 106.62148097474062 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: RandomForests Pearson Correlation: 0.038170023975046166 Spearman Correlation: 0.04026301793399473 Coefficient of Determination: 0.0014445327695656873 RMSE: 0.20362056138247345 NRMSE: 0.1428555322041263 MAPE: 145.70763739621518 Pearson Correlation: 0.05682417457895166 Spearman Correlation: 0.057279399409552734 Coefficient of Determination: -0.0036542509828394465 RMSE: 0.22379993605836807 NRMSE: 0.20191443089379016 MAPE: 107.39493767902192 Protein: PTEN x_train_column_count: 1 x_train columns: ['PTEN'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -6.269934017089085e-06 RMSE: 0.5690293593838737 NRMSE: 0.08897339682337169 MAPE: 306.950665127385 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005469590696549398 RMSE: 0.7236755599168984 NRMSE: 0.1399867610486108 MAPE: 394.53455353066096 Protein: BRCA2 x_train_column_count: 1 x_train columns: ['BRCA2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.0017293408339848913 Spearman Correlation: 0.001573264496304759 Coefficient of Determination: 2.9906197199780493e-06 RMSE: 0.20046790107948445 NRMSE: 0.1291466587724171 MAPE: 103.36205519297397 Pearson Correlation: -0.004853743052261786 Spearman Correlation: -0.016812541184208947 Coefficient of Determination: -0.09374062548263384 RMSE: 0.1736977780391837 NRMSE: 0.22715984834785025 MAPE: 102.33090473738133 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: RandomForests Pearson Correlation: 0.0017293408339849263 Spearman Correlation: 0.001573264496304759 Coefficient of Determination: -3.743825403090817e-05 RMSE: 0.20047195339637808 NRMSE: 0.12914926938082016 MAPE: 105.32990823311846 Pearson Correlation: -0.004853743052261784 Spearman Correlation: -0.016812541184208947 Coefficient of Determination: -0.09796167737362804 RMSE: 0.1740326295045223 NRMSE: 0.22759776303475093 MAPE: 104.01668259856571 Protein: CDKN2A x_train_column_count: 1 x_train columns: ['CDKN2A'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 0.12976399481728043 Spearman Correlation: 0.10363878671427582 Coefficient of Determination: 0.01683869435093932 RMSE: 0.6739406458206236 NRMSE: 0.1716128048230561 MAPE: 279.87077485882344 Pearson Correlation: 0.04194020008789092 Spearman Correlation: 0.05267929571052136 Coefficient of Determination: -0.025253273021587974 RMSE: 0.6135528794023152 NRMSE: 0.15438788138253068 MAPE: 285.1004800880891 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: RandomForests Pearson Correlation: 0.1297639948172811 Spearman Correlation: 0.10363878671427582 Coefficient of Determination: 0.016711889881956488 RMSE: 0.6739841055916045 NRMSE: 0.17162387145517163 MAPE: 281.9278185882 Pearson Correlation: 0.0419402000878908 Spearman Correlation: 0.05267929571052136 Coefficient of Determination: -0.020087039319949485 RMSE: 0.6120050858825572 NRMSE: 0.15399841118304955 MAPE: 286.4116290542241 Protein: TP53 x_train_column_count: 1 x_train columns: ['TP53'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.220446049250313e-16 RMSE: 0.42379293437766064 NRMSE: 0.10778324331179853 MAPE: 459.9790072255088 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387257 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.488458933638029e-05 RMSE: 0.4238024451568515 NRMSE: 0.10778566218796296 MAPE: 470.36376241957163 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015597451398132733 RMSE: 0.5285575165017301 NRMSE: 0.14157158604572925 MAPE: 142.3071053757321 Protein: CTNNB1 x_train_column_count: 1 x_train columns: ['CTNNB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.019855616894553e-05 RMSE: 0.7559997686116472 NRMSE: 0.14870176408568986 MAPE: 710.9942516797496 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -7.503681818787911e-06 RMSE: 0.6776602739280774 NRMSE: 0.21703255324545534 MAPE: 272.4237928007498 Protein: CCNE1 x_train_column_count: 1 x_train columns: ['CCNE1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.08097211632020355 Spearman Correlation: 0.10028966615370673 Coefficient of Determination: 0.006556483621372622 RMSE: 0.44731941888179777 NRMSE: 0.15933015810571602 MAPE: 111.75141266976858 Pearson Correlation: 0.05263185104833817 Spearman Correlation: 0.08854605023683378 Coefficient of Determination: -0.0016479170488092887 RMSE: 0.6486298867276443 NRMSE: 0.156533988157358 MAPE: 115.05028000069449 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: RandomForests Pearson Correlation: 0.08097211632020365 Spearman Correlation: 0.10028966615370673 Coefficient of Determination: 0.006552554918734965 RMSE: 0.44732030337256873 NRMSE: 0.1593304731514047 MAPE: 111.72885445197274 Pearson Correlation: 0.05263185104833814 Spearman Correlation: 0.08854605023683378 Coefficient of Determination: -0.0015551878133204244 RMSE: 0.6485998620330368 NRMSE: 0.15652674229143923 MAPE: 115.02083080425555 Protein: CCND1 x_train_column_count: 1 x_train columns: ['CCND1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.8898482536462 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.3390802848015 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.838630392216658e-06 RMSE: 0.22761920559404059 NRMSE: 0.14336592108865803 MAPE: 687.1433627712928 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002779853082355732 RMSE: 0.2763422407553681 NRMSE: 0.17655169289644146 MAPE: 267.74516731217955 Protein: ERBB2 x_train_column_count: 1 x_train columns: ['ERBB2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.220446049250313e-16 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123244 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959678 RMSE: 0.8759513579197151 NRMSE: 0.19381598803401154 MAPE: 565.7053612002638 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.24194547875112e-05 RMSE: 1.0279472750268104 NRMSE: 0.17512773651580327 MAPE: 594.677870571246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016766973979266186 RMSE: 0.8749645614727234 NRMSE: 0.19359764608313385 MAPE: 554.1014733883659 Protein: ERBB3 x_train_column_count: 1 x_train columns: ['ERBB3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.966491893035105e-05 RMSE: 0.4689148210412275 NRMSE: 0.1265466515829915 MAPE: 247.0836923393686 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05205269876691898 RMSE: 0.4276839812194808 NRMSE: 0.20692650675402102 MAPE: 237.98211644201643
Unnormalized
scenario = Scenario.selfmRNA
normalizeTechnique = NormalizeTechnique.UN
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 10.7401 | 141.1933 | 314.4482 | 0.0000 | 0.0 | 0.000 | 2.9988 | 9.4249 | 0.0 | 0.0000 | ... | 74.1138 | 533.3625 | 1053.4444 | 94.6772 | 881.2262 | 5343.4779 | 934.3482 | 508.0867 | 52.2652 | 0.8568 |
| TCGA-A1-A0SH-01 | 3.0048 | 79.8003 | 95.7054 | 0.0000 | 0.0 | 0.000 | 0.3612 | 3.9727 | 0.0 | 0.0000 | ... | 87.7601 | 581.0946 | 801.3977 | 19.8634 | 1353.2389 | 5464.9614 | 1312.7898 | 1001.1151 | 455.7746 | 0.0000 |
| TCGA-A1-A0SJ-01 | 4.9419 | 134.8733 | 63.6488 | 0.3658 | 0.0 | 0.000 | 0.3658 | 4.7554 | 0.0 | 0.7316 | ... | 83.7677 | 2731.4129 | 834.3850 | 51.2117 | 1092.6383 | 3032.0988 | 958.3905 | 718.7929 | 43.5299 | 0.0000 |
| TCGA-A1-A0SK-01 | 28.8560 | 1119.1932 | 166.7192 | 0.3152 | 0.0 | 1.891 | 0.0000 | 3.4668 | 0.0 | 0.0000 | ... | 69.0199 | 610.1481 | 1775.6067 | 158.5251 | 1380.7123 | 591.2386 | 1798.9285 | 1335.6445 | 49.4800 | 0.0000 |
| TCGA-A1-A0SQ-01 | 1.0368 | 41.5532 | 75.8447 | 0.0000 | 0.0 | 0.000 | 0.4034 | 5.6480 | 0.0 | 0.0000 | ... | 106.1019 | 617.2466 | 875.0378 | 25.4160 | 969.4402 | 2903.0761 | 715.6833 | 691.4776 | 17.7509 | 0.0000 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 1 x_train columns: ['RB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.19391279737668238 Spearman Correlation: 0.25847504910702246 Coefficient of Determination: 0.0376021729864503 RMSE: 0.21984820246432935 NRMSE: 0.08326006531502719 MAPE: 189.58061202587032 Pearson Correlation: 0.27962798152870116 Spearman Correlation: 0.34967808018729885 Coefficient of Determination: 0.021262301857832733 RMSE: 0.2774685518687956 NRMSE: 0.1370736289200316 MAPE: 131.61247132621608 Predictor: ElasticNet Pearson Correlation: 0.19391279737668243 Spearman Correlation: 0.25847504910702246 Coefficient of Determination: 0.037602166880939536 RMSE: 0.21984820316169457 NRMSE: 0.08326006557913067 MAPE: 189.5233272234876 Pearson Correlation: 0.2796279815287011 Spearman Correlation: 0.34967808018729885 Coefficient of Determination: 0.021248651856464407 RMSE: 0.2774704867247404 NRMSE: 0.137074584767907 MAPE: 131.60775066232006 Predictor: RandomForests Pearson Correlation: 0.338356626817481 Spearman Correlation: 0.33951132296467335 Coefficient of Determination: 0.0980294642022066 RMSE: 0.2128343775533181 NRMSE: 0.08060381653221665 MAPE: 145.37698710976034 Pearson Correlation: 0.27053666597285697 Spearman Correlation: 0.3280678885109722 Coefficient of Determination: 0.025911503927463886 RMSE: 0.27680875151246914 NRMSE: 0.1367476776416065 MAPE: 107.54919913765022 Protein: CDH1 x_train_column_count: 1 x_train columns: ['CDH1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 0.5012433342985568 Spearman Correlation: 0.5636647709924965 Coefficient of Determination: 0.2512448801787346 RMSE: 0.9764389700758118 NRMSE: 0.164126698952114 MAPE: 691.9943003587867 Pearson Correlation: 0.5235921917169751 Spearman Correlation: 0.6555360452638768 Coefficient of Determination: 0.2657837208609375 RMSE: 0.9942240983612216 NRMSE: 0.16102881318409212 MAPE: 377.3829911994232 Predictor: ElasticNet Pearson Correlation: 0.5012433342985566 Spearman Correlation: 0.5636647709924965 Coefficient of Determination: 0.2512448801776538 RMSE: 0.9764389700765166 NRMSE: 0.16412669895223247 MAPE: 691.9936382410532 Pearson Correlation: 0.5235921917169752 Spearman Correlation: 0.6555360452638768 Coefficient of Determination: 0.2657839212594333 RMSE: 0.994223962678431 NRMSE: 0.16102879120832353 MAPE: 377.3826872154549 Predictor: RandomForests Pearson Correlation: 0.7132134998444969 Spearman Correlation: 0.5781801023015845 Coefficient of Determination: 0.5084673634826771 RMSE: 0.7911364260120465 NRMSE: 0.13297974988856612 MAPE: 306.3488021625489 Pearson Correlation: 0.7364529516243186 Spearman Correlation: 0.6543510118962805 Coefficient of Determination: 0.5391808694107084 RMSE: 0.7876577143766689 NRMSE: 0.12757243276483898 MAPE: 153.68920103222936 Protein: CDH2 x_train_column_count: 1 x_train columns: ['CDH2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.15002477351668805 Spearman Correlation: 0.021027718948557195 Coefficient of Determination: 0.02250743266873345 RMSE: 0.366993371962299 NRMSE: 0.1355784991382294 MAPE: 373.6787655351268 Pearson Correlation: 0.10564670001853972 Spearman Correlation: 0.11871524729294705 Coefficient of Determination: 0.008640461878668515 RMSE: 0.3734908911193236 NRMSE: 0.19274959545818424 MAPE: 104.18723456874639 Predictor: ElasticNet Pearson Correlation: 0.15002477351668805 Spearman Correlation: 0.021027718948557195 Coefficient of Determination: 0.022507432249068038 RMSE: 0.36699337204107935 NRMSE: 0.13557849916733325 MAPE: 373.6898428330703 Pearson Correlation: 0.10564670001853971 Spearman Correlation: 0.11871524729294705 Coefficient of Determination: 0.008639812591772711 RMSE: 0.3734910134274733 NRMSE: 0.19274965857845555 MAPE: 104.1873778445509 Predictor: RandomForests Pearson Correlation: 0.19331701961991646 Spearman Correlation: 0.1288920303560814 Coefficient of Determination: 0.03662847645748135 RMSE: 0.36433290051662137 NRMSE: 0.1345956401735663 MAPE: 517.4362375376886 Pearson Correlation: 0.044230558158288136 Spearman Correlation: -0.05978684567685635 Coefficient of Determination: -0.006409334490806495 RMSE: 0.3763151890353155 NRMSE: 0.19420714715142465 MAPE: 98.36754929438122 Protein: CDH3 x_train_column_count: 1 x_train columns: ['CDH3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.24821600086503437 Spearman Correlation: 0.3061115403229242 Coefficient of Determination: 0.061611183085430676 RMSE: 0.2022653234074646 NRMSE: 0.14190472821425085 MAPE: 292.6260357700164 Pearson Correlation: 0.4229275133140767 Spearman Correlation: 0.4640717978733782 Coefficient of Determination: 0.16217388422713308 RMSE: 0.187257270741668 NRMSE: 0.14332632030498657 MAPE: 198.45611925540754 Predictor: ElasticNet Pearson Correlation: 0.24821600086503437 Spearman Correlation: 0.3061115403229242 Coefficient of Determination: 0.06161118266330978 RMSE: 0.20226532345295767 NRMSE: 0.14190472824616776 MAPE: 292.6085090187212 Pearson Correlation: 0.42292751331407674 Spearman Correlation: 0.4640717978733782 Coefficient of Determination: 0.16216875583511714 RMSE: 0.1872578438481901 NRMSE: 0.14332675895951053 MAPE: 198.4467027602953 Predictor: RandomForests Pearson Correlation: 0.3496682668189332 Spearman Correlation: 0.3307097672586625 Coefficient of Determination: 0.12015906260707776 RMSE: 0.19585384588255172 NRMSE: 0.13740658211437934 MAPE: 381.1612404025096 Pearson Correlation: 0.4456557812474688 Spearman Correlation: 0.4605862331967038 Coefficient of Determination: 0.17847992914693533 RMSE: 0.1854260861696705 NRMSE: 0.14192473549354423 MAPE: 326.56281030401266 Protein: PTEN x_train_column_count: 1 x_train columns: ['PTEN'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 0.4023718837521098 Spearman Correlation: 0.4288996648292669 Coefficient of Determination: 0.1619031328342213 RMSE: 0.5735222164263055 NRMSE: 0.08967589968357526 MAPE: 434.8953920378395 Pearson Correlation: 0.38153563901324705 Spearman Correlation: 0.40280460442883625 Coefficient of Determination: 0.13841605075416663 RMSE: 0.4610133775957622 NRMSE: 0.15193902102556264 MAPE: 168.22638894726828 Predictor: ElasticNet Pearson Correlation: 0.4023718837521098 Spearman Correlation: 0.4288996648292669 Coefficient of Determination: 0.16190313245811605 RMSE: 0.5735222165549927 NRMSE: 0.08967589970369677 MAPE: 434.87131955099716 Pearson Correlation: 0.38153563901324705 Spearman Correlation: 0.40280460442883625 Coefficient of Determination: 0.13841985865198503 RMSE: 0.4610123588361996 NRMSE: 0.1519386852666929 MAPE: 168.22070737611767 Predictor: RandomForests Pearson Correlation: 0.4510661366641352 Spearman Correlation: 0.4465246887841456 Coefficient of Determination: 0.199567912918601 RMSE: 0.5604867911010524 NRMSE: 0.08763768135424163 MAPE: 529.5491842611985 Pearson Correlation: 0.3866330546263069 Spearman Correlation: 0.3981096259406254 Coefficient of Determination: 0.13840788698258943 RMSE: 0.4610155617120034 NRMSE: 0.15193974085821746 MAPE: 202.21690083920234 Protein: BRCA2 x_train_column_count: 1 x_train columns: ['BRCA2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.0016801136622339164 Spearman Correlation: -0.003365850045682841 Coefficient of Determination: 2.822781917766193e-06 RMSE: 0.1976109479453672 NRMSE: 0.1278323702957365 MAPE: 122.66734984794758 Pearson Correlation: -0.08404684070019268 Spearman Correlation: -0.06737887447433855 Coefficient of Determination: -0.005063311169702267 RMSE: 0.1852017608932443 NRMSE: 0.18535004092598512 MAPE: 104.34165552314427 Predictor: ElasticNet Pearson Correlation: 0.001680113662234027 Spearman Correlation: -0.003365850045682841 Coefficient of Determination: 2.7358727012760653e-06 RMSE: 0.19761095653249758 NRMSE: 0.12783237585065763 MAPE: 122.61315173587421 Pearson Correlation: -0.08404684070019271 Spearman Correlation: -0.06737887447433855 Coefficient of Determination: -0.004996483180788047 RMSE: 0.18519560363587143 NRMSE: 0.18534387873886254 MAPE: 104.29990341904134 Predictor: RandomForests Pearson Correlation: 0.3257942376102405 Spearman Correlation: 0.25500959044958793 Coefficient of Determination: 0.04912356112431371 RMSE: 0.19269642508331206 NRMSE: 0.12465321897410636 MAPE: 133.9139947559344 Pearson Correlation: -0.03975777992192093 Spearman Correlation: -0.01067431406904905 Coefficient of Determination: -0.021845741347306546 RMSE: 0.18674159822161593 NRMSE: 0.18689111111050435 MAPE: 115.13583396986726 Protein: CDKN2A x_train_column_count: 1 x_train columns: ['CDKN2A'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 0.48027814349293335 Spearman Correlation: 0.4872043250292133 Coefficient of Determination: 0.23066709511701877 RMSE: 0.5637355359917146 NRMSE: 0.12744106160093013 MAPE: 154.405934596002 Pearson Correlation: 0.5965712816312629 Spearman Correlation: 0.5412203687445128 Coefficient of Determination: 0.351308157175233 RMSE: 0.6015355101867073 NRMSE: 0.16244545238636438 MAPE: 147.6929939797062 Predictor: ElasticNet Pearson Correlation: 0.48027814349293335 Spearman Correlation: 0.4872043250292133 Coefficient of Determination: 0.23066709449592215 RMSE: 0.5637355362192715 NRMSE: 0.12744106165237287 MAPE: 154.4081579768272 Pearson Correlation: 0.596571281631263 Spearman Correlation: 0.5412203687445128 Coefficient of Determination: 0.35130488166567975 RMSE: 0.6015370288837933 NRMSE: 0.1624458625125016 MAPE: 147.7069685838304 Predictor: RandomForests Pearson Correlation: 0.6031166548470466 Spearman Correlation: 0.5142043852276713 Coefficient of Determination: 0.36338257195258583 RMSE: 0.5128112215701984 NRMSE: 0.11592883950948307 MAPE: 222.42155552398435 Pearson Correlation: 0.6736173012257093 Spearman Correlation: 0.5183481629817652 Coefficient of Determination: 0.4416816519711879 RMSE: 0.5580627074004604 NRMSE: 0.15070556505548485 MAPE: 518.4052407636528 Protein: TP53 x_train_column_count: 1 x_train columns: ['TP53'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.35554928541952857 Spearman Correlation: 0.2977431207885347 Coefficient of Determination: 0.12641529436233723 RMSE: 0.4232312227924494 NRMSE: 0.1017138242711967 MAPE: 551.3587248678076 Pearson Correlation: 0.2926026738474283 Spearman Correlation: 0.2420007804116672 Coefficient of Determination: 0.06543743518250444 RMSE: 0.4066420333449024 NRMSE: 0.1462267731111879 MAPE: 771.4393165883603 Predictor: ElasticNet Pearson Correlation: 0.3555492854195285 Spearman Correlation: 0.2977431207885347 Coefficient of Determination: 0.1264152937505545 RMSE: 0.4232312229406466 NRMSE: 0.10171382430681246 MAPE: 551.3449174722211 Pearson Correlation: 0.2926026738474284 Spearman Correlation: 0.2420007804116672 Coefficient of Determination: 0.06544590136094908 RMSE: 0.40664019146082536 NRMSE: 0.14622611077738334 MAPE: 771.3836964982651 Predictor: RandomForests Pearson Correlation: 0.45492238975734456 Spearman Correlation: 0.34634270161779623 Coefficient of Determination: 0.20619176236443626 RMSE: 0.40344374717794973 NRMSE: 0.09695836269597446 MAPE: 668.2271002590516 Pearson Correlation: 0.32834898408627644 Spearman Correlation: 0.28867684750577033 Coefficient of Determination: 0.09003759286253088 RMSE: 0.4012543959578011 NRMSE: 0.14428940125779463 MAPE: 1228.5518791228187 Protein: CTNNB1 x_train_column_count: 1 x_train columns: ['CTNNB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 0.08898105342822928 Spearman Correlation: 0.14590811000321963 Coefficient of Determination: 0.007917627869197141 RMSE: 0.7343107892164393 NRMSE: 0.1479958057150653 MAPE: 635.7829662685036 Pearson Correlation: -0.0024019468238156453 Spearman Correlation: -0.034040581406692035 Coefficient of Determination: -0.022319441458223288 RMSE: 0.7592919987705886 NRMSE: 0.1883818783234726 MAPE: 284.0557468282036 Predictor: ElasticNet Pearson Correlation: 0.08898105342822928 Spearman Correlation: 0.14590811000321963 Coefficient of Determination: 0.007917627859243881 RMSE: 0.7343107892201228 NRMSE: 0.14799580571580767 MAPE: 635.7839649126599 Pearson Correlation: -0.0024019468238157377 Spearman Correlation: -0.034040581406692035 Coefficient of Determination: -0.022319025688373184 RMSE: 0.7592918443713178 NRMSE: 0.1883818400167017 MAPE: 284.0572113694304 Predictor: RandomForests Pearson Correlation: 0.3101921197195444 Spearman Correlation: 0.30218639412689285 Coefficient of Determination: 0.08112196149899753 RMSE: 0.7066998169279368 NRMSE: 0.14243098472860852 MAPE: 629.3479296651823 Pearson Correlation: -0.06030718098076416 Spearman Correlation: -0.04014575748895606 Coefficient of Determination: -0.07580801753149946 RMSE: 0.7789021484733238 NRMSE: 0.19324719606840765 MAPE: 401.6201927378137 Protein: CCNE1 x_train_column_count: 1 x_train columns: ['CCNE1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.7219395993512735 Spearman Correlation: 0.7131090453751777 Coefficient of Determination: 0.5211967851114772 RMSE: 0.33467919949614106 NRMSE: 0.08076820220965346 MAPE: 91.95768178212865 Pearson Correlation: 0.7713064884061223 Spearman Correlation: 0.7106623744024974 Coefficient of Determination: 0.5218333477620515 RMSE: 0.3713609996544497 NRMSE: 0.13227462142634006 MAPE: 54.38203983643349 Predictor: ElasticNet Pearson Correlation: 0.7219395993512734 Spearman Correlation: 0.7131090453751777 Coefficient of Determination: 0.5211967831854369 RMSE: 0.33467920016928354 NRMSE: 0.08076820237210308 MAPE: 91.95910751284202 Pearson Correlation: 0.7713064884061223 Spearman Correlation: 0.7106623744024974 Coefficient of Determination: 0.5218168547808681 RMSE: 0.371367404113164 NRMSE: 0.13227690262267638 MAPE: 54.38379352439229 Predictor: RandomForests Pearson Correlation: 0.8562861508639215 Spearman Correlation: 0.7204360697849619 Coefficient of Determination: 0.7279163800285591 RMSE: 0.25229078682087813 NRMSE: 0.06088538910173954 MAPE: 54.30365639848357 Pearson Correlation: 0.8350602153703399 Spearman Correlation: 0.7068832036023305 Coefficient of Determination: 0.6949121277125943 RMSE: 0.29663276628948443 NRMSE: 0.10565726314852517 MAPE: 44.991407020009255 Protein: CCND1 x_train_column_count: 1 x_train columns: ['CCND1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 0.4014769912379663 Spearman Correlation: 0.3731637827526827 Coefficient of Determination: 0.16118377449348997 RMSE: 0.21879564097710175 NRMSE: 0.13153361206255892 MAPE: 347.3099767263441 Pearson Correlation: 0.472225253956946 Spearman Correlation: 0.4734221051604722 Coefficient of Determination: 0.08521214291088708 RMSE: 0.22471429002535695 NRMSE: 0.1600437938189825 MAPE: 1097.9020914203454 Predictor: ElasticNet Pearson Correlation: 0.4014769912379663 Spearman Correlation: 0.3731637827526827 Coefficient of Determination: 0.16118377448506616 RMSE: 0.2187956409782004 NRMSE: 0.1315336120632194 MAPE: 347.3103752911429 Pearson Correlation: 0.4722252539569458 Spearman Correlation: 0.4734221051604722 Coefficient of Determination: 0.0852166238226677 RMSE: 0.22471373966489103 NRMSE: 0.16004340184668325 MAPE: 1097.9036461892458 Predictor: RandomForests Pearson Correlation: 0.4678371375434505 Spearman Correlation: 0.4000144577763212 Coefficient of Determination: 0.21263881710072907 RMSE: 0.21197871451568037 NRMSE: 0.12743547301083333 MAPE: 313.8994682707794 Pearson Correlation: 0.5051577497307473 Spearman Correlation: 0.4767786498993165 Coefficient of Determination: 0.2533320194705554 RMSE: 0.20301786639906733 NRMSE: 0.14459138111722075 MAPE: 1138.045040698996 Protein: ERBB2 x_train_column_count: 1 x_train columns: ['ERBB2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 0.7657610435301817 Spearman Correlation: 0.6137508967340191 Coefficient of Determination: 0.5863899757884328 RMSE: 0.6554327410192267 NRMSE: 0.11166375470964898 MAPE: 320.5730885843144 Pearson Correlation: 0.7627625013199513 Spearman Correlation: 0.7166081357916302 Coefficient of Determination: 0.5648365964407824 RMSE: 0.5983466371514002 NRMSE: 0.11094875526634532 MAPE: 281.0691986314359 Predictor: ElasticNet Pearson Correlation: 0.7657610435301817 Spearman Correlation: 0.6137508967340191 Coefficient of Determination: 0.5863899757883764 RMSE: 0.6554327410192713 NRMSE: 0.11166375470965659 MAPE: 320.57315839682013 Pearson Correlation: 0.7627625013199513 Spearman Correlation: 0.7166081357916302 Coefficient of Determination: 0.5648365532286272 RMSE: 0.5983466668596052 NRMSE: 0.11094876077500561 MAPE: 281.069266393709 Predictor: RandomForests Pearson Correlation: 0.8350447059162798 Spearman Correlation: 0.6216515632506531 Coefficient of Determination: 0.6965509892505153 RMSE: 0.5614039541274837 NRMSE: 0.09564440331319891 MAPE: 467.4276979149924 Pearson Correlation: 0.8040149199599619 Spearman Correlation: 0.712575091635544 Coefficient of Determination: 0.6363330370305993 RMSE: 0.5469890053467115 NRMSE: 0.1014257380579847 MAPE: 341.96897482700155 Protein: ERBB3 x_train_column_count: 1 x_train columns: ['ERBB3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.40021079138717147 Spearman Correlation: 0.4461608353851102 Coefficient of Determination: 0.160168677542746 RMSE: 0.4207647918898243 NRMSE: 0.11355234069897321 MAPE: 200.24454248262978 Pearson Correlation: 0.4241326159508129 Spearman Correlation: 0.47324952839944506 Coefficient of Determination: 0.17570228561293066 RMSE: 0.42264869569030494 NRMSE: 0.16959131664512106 MAPE: 193.8904042665433 Predictor: ElasticNet Pearson Correlation: 0.40021079138717147 Spearman Correlation: 0.4461608353851102 Coefficient of Determination: 0.16016867751350838 RMSE: 0.42076479189714844 NRMSE: 0.1135523407009498 MAPE: 200.2441254891731 Pearson Correlation: 0.4241326159508129 Spearman Correlation: 0.47324952839944506 Coefficient of Determination: 0.1757020601130055 RMSE: 0.42264875350148234 NRMSE: 0.1695913398423385 MAPE: 193.8899861081272 Predictor: RandomForests Pearson Correlation: 0.4888583547909291 Spearman Correlation: 0.46249054756555785 Coefficient of Determination: 0.2374084059193693 RMSE: 0.40094921293402225 NRMSE: 0.10820468467806303 MAPE: 242.40227594442695 Pearson Correlation: 0.4306135180238071 Spearman Correlation: 0.47175791537273415 Coefficient of Determination: 0.17674257303902818 RMSE: 0.4223819140865897 NRMSE: 0.16948426830002475 MAPE: 270.9861842046686 Fold: 2 Protein: RB1 x_train_column_count: 1 x_train columns: ['RB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.24789230471088958 Spearman Correlation: 0.3159366197816136 Coefficient of Determination: 0.061450594734876685 RMSE: 0.227704938830993 NRMSE: 0.08327418769418996 MAPE: 202.73532724373035 Pearson Correlation: 0.053223143851448954 Spearman Correlation: 0.10746268656716418 Coefficient of Determination: -0.04577677934407487 RMSE: 0.25044677379227626 NRMSE: 0.14348797068457808 MAPE: 328.71307770952 Predictor: ElasticNet Pearson Correlation: 0.24789230471088966 Spearman Correlation: 0.3159366197816136 Coefficient of Determination: 0.0614505891752305 RMSE: 0.22770493950541615 NRMSE: 0.08327418794083388 MAPE: 202.68623360781214 Pearson Correlation: 0.05322314385144897 Spearman Correlation: 0.10746268656716418 Coefficient of Determination: -0.04575272809607256 RMSE: 0.25044389383155213 NRMSE: 0.14348632067442343 MAPE: 328.60979867665503 Predictor: RandomForests Pearson Correlation: 0.35614812748472296 Spearman Correlation: 0.4067656823580468 Coefficient of Determination: 0.11704931686327302 RMSE: 0.22085747588364613 NRMSE: 0.08076999556891681 MAPE: 212.91843709848632 Pearson Correlation: 0.11218713523215128 Spearman Correlation: 0.13196685330144695 Coefficient of Determination: -0.018378086466819266 RMSE: 0.24714422519366094 NRMSE: 0.14159584810169526 MAPE: 371.280873187673 Protein: CDH1 x_train_column_count: 1 x_train columns: ['CDH1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.48389120677283565 Spearman Correlation: 0.5479778011770806 Coefficient of Determination: 0.2341506999920714 RMSE: 0.9806662839711408 NRMSE: 0.1573219353446925 MAPE: 652.3991389829431 Pearson Correlation: 0.5757959526475028 Spearman Correlation: 0.6868207979709298 Coefficient of Determination: 0.26633076007756606 RMSE: 0.9855576770404496 NRMSE: 0.1750235618967234 MAPE: 250.8486018784259 Predictor: ElasticNet Pearson Correlation: 0.48389120677283565 Spearman Correlation: 0.5479778011770806 Coefficient of Determination: 0.2341506999910703 RMSE: 0.9806662839717817 NRMSE: 0.15732193534479533 MAPE: 652.3985222420604 Pearson Correlation: 0.5757959526475028 Spearman Correlation: 0.6868207979709298 Coefficient of Determination: 0.26633051106827343 RMSE: 0.9855578442908848 NRMSE: 0.17502359159845227 MAPE: 250.84816415358551 Predictor: RandomForests Pearson Correlation: 0.7350620519654282 Spearman Correlation: 0.5614465463510813 Coefficient of Determination: 0.5400871009269116 RMSE: 0.7599541298952075 NRMSE: 0.12191451510310539 MAPE: 218.3262024908791 Pearson Correlation: 0.6514144231909483 Spearman Correlation: 0.6951134521052208 Coefficient of Determination: 0.3838100091909181 RMSE: 0.9032109819804985 NRMSE: 0.16039974817625618 MAPE: 213.09904146139536 Protein: CDH2 x_train_column_count: 1 x_train columns: ['CDH2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.1470313787581837 Spearman Correlation: 0.03346468965108404 Coefficient of Determination: 0.021618226339532587 RMSE: 0.36409773078103375 NRMSE: 0.13192902774876214 MAPE: 381.9470937388793 Pearson Correlation: 0.11717867760285976 Spearman Correlation: 0.063681592039801 Coefficient of Determination: 0.012877190177729814 RMSE: 0.3845800481612378 NRMSE: 0.2026056929364798 MAPE: 121.67281423224681 Predictor: ElasticNet Pearson Correlation: 0.1470313787581837 Spearman Correlation: 0.03346468965108404 Coefficient of Determination: 0.021618225886850806 RMSE: 0.36409773086526487 NRMSE: 0.1319290277792829 MAPE: 381.9573351533159 Pearson Correlation: 0.11717867760285976 Spearman Correlation: 0.063681592039801 Coefficient of Determination: 0.012876554839764243 RMSE: 0.3845801719240886 NRMSE: 0.2026057581376213 MAPE: 121.674712278187 Predictor: RandomForests Pearson Correlation: 0.19455280933418412 Spearman Correlation: 0.14521011138581139 Coefficient of Determination: 0.03651059964118086 RMSE: 0.3613160602024537 NRMSE: 0.13092110305183483 MAPE: 424.3360219113005 Pearson Correlation: 0.11830349762100852 Spearman Correlation: 0.0855059428777579 Coefficient of Determination: 0.010769358098726367 RMSE: 0.3849904316896376 NRMSE: 0.20282189250153443 MAPE: 124.97634642871276 Protein: CDH3 x_train_column_count: 1 x_train columns: ['CDH3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.3303764572390311 Spearman Correlation: 0.3550272027884919 Coefficient of Determination: 0.10914860349781341 RMSE: 0.1960438181206852 NRMSE: 0.1475422532197551 MAPE: 270.9980417434456 Pearson Correlation: 0.10770672491069785 Spearman Correlation: 0.25419471271095506 Coefficient of Determination: -0.1811343074896139 RMSE: 0.2151076086329794 NRMSE: 0.1769995956825306 MAPE: 624.4702544671219 Predictor: ElasticNet Pearson Correlation: 0.33037645723903114 Spearman Correlation: 0.3550272027884919 Coefficient of Determination: 0.1091486031387211 RMSE: 0.19604381816019675 NRMSE: 0.1475422532494914 MAPE: 270.98648892029274 Pearson Correlation: 0.10770672491069783 Spearman Correlation: 0.25419471271095506 Coefficient of Determination: -0.181127467183138 RMSE: 0.21510698575542458 NRMSE: 0.17699908315265747 MAPE: 624.4458908770081 Predictor: RandomForests Pearson Correlation: 0.4204408504993642 Spearman Correlation: 0.38155013256774595 Coefficient of Determination: 0.17584235816615323 RMSE: 0.18856264633511197 NRMSE: 0.14191193570937055 MAPE: 407.97875051638437 Pearson Correlation: 0.15295236629097841 Spearman Correlation: 0.25482125674289846 Coefficient of Determination: -0.20407823566708516 RMSE: 0.21718682836391678 NRMSE: 0.17871046520523065 MAPE: 749.9682708776052 Protein: PTEN x_train_column_count: 1 x_train columns: ['PTEN'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.4128327185118924 Spearman Correlation: 0.4509122731754614 Coefficient of Determination: 0.1704308534739194 RMSE: 0.5681154375639597 NRMSE: 0.08883049606191222 MAPE: 340.1165131813267 Pearson Correlation: 0.3635067117705541 Spearman Correlation: 0.32171495463857186 Coefficient of Determination: 0.08295221188442037 RMSE: 0.4899504108238007 NRMSE: 0.16432466153199649 MAPE: 696.1906514966493 Predictor: ElasticNet Pearson Correlation: 0.41283271851189235 Spearman Correlation: 0.4509122731754614 Coefficient of Determination: 0.17043085305641315 RMSE: 0.5681154377069204 NRMSE: 0.08883049608426556 MAPE: 340.10021523362974 Pearson Correlation: 0.3635067117705541 Spearman Correlation: 0.32171495463857186 Coefficient of Determination: 0.08296507531857877 RMSE: 0.4899469745432527 NRMSE: 0.16432350903650816 MAPE: 696.1444875615713 Predictor: RandomForests Pearson Correlation: 0.4637617822650544 Spearman Correlation: 0.47168364395156603 Coefficient of Determination: 0.21156824157538845 RMSE: 0.5538502419387915 NRMSE: 0.08659999092155289 MAPE: 387.81209059025514 Pearson Correlation: 0.3283337114702817 Spearman Correlation: 0.31888806115781315 Coefficient of Determination: 0.06748232850836522 RMSE: 0.49406566940135677 NRMSE: 0.16570487972945963 MAPE: 807.3513768694605 Protein: BRCA2 x_train_column_count: 1 x_train columns: ['BRCA2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.04001158289267252 Spearman Correlation: 0.057472501576392276 Coefficient of Determination: 0.0016009267655772152 RMSE: 0.19516798278839598 NRMSE: 0.12573231295757512 MAPE: 117.98294827979335 Pearson Correlation: -0.07561513606008485 Spearman Correlation: -0.13059701492537315 Coefficient of Determination: -0.02452145724173871 RMSE: 0.19554203218990604 NRMSE: 0.13236178253329048 MAPE: 118.7555136669517 Predictor: ElasticNet Pearson Correlation: 0.040011582892672495 Spearman Correlation: 0.057472501576392276 Coefficient of Determination: 0.0016008465227753677 RMSE: 0.19516799063136472 NRMSE: 0.12573231801022047 MAPE: 118.03800547130696 Pearson Correlation: -0.07561513606008484 Spearman Correlation: -0.13059701492537315 Coefficient of Determination: -0.024457586349982297 RMSE: 0.1955359368375128 NRMSE: 0.13235765660855245 MAPE: 118.73387411095851 Predictor: RandomForests Pearson Correlation: 0.3068850157044312 Spearman Correlation: 0.25247642075531285 Coefficient of Determination: 0.044202194303427866 RMSE: 0.19095872370308548 NRMSE: 0.12302059829478852 MAPE: 126.6880580191218 Pearson Correlation: 0.07896059153515289 Spearman Correlation: 0.05877387777856347 Coefficient of Determination: -0.011046221373264498 RMSE: 0.19425182166951882 NRMSE: 0.13148844311664884 MAPE: 123.9361936403578 Protein: CDKN2A x_train_column_count: 1 x_train columns: ['CDKN2A'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.5036612591893176 Spearman Correlation: 0.4759909513511134 Coefficient of Determination: 0.25367466400816874 RMSE: 0.5730645647248521 NRMSE: 0.1295500315869452 MAPE: 165.20729153512266 Pearson Correlation: 0.5627834065476419 Spearman Correlation: 0.5756072578285046 Coefficient of Determination: 0.2930656148585532 RMSE: 0.5662177809563149 NRMSE: 0.15296568536749378 MAPE: 173.217205001395 Predictor: ElasticNet Pearson Correlation: 0.5036612591893176 Spearman Correlation: 0.4759909513511134 Coefficient of Determination: 0.2536746635315169 RMSE: 0.5730645649078503 NRMSE: 0.12955003162831474 MAPE: 165.2120812165881 Pearson Correlation: 0.5627834065476419 Spearman Correlation: 0.5756072578285046 Coefficient of Determination: 0.2930601808938539 RMSE: 0.5662199571140928 NRMSE: 0.15296627326401901 MAPE: 173.21988157099673 Predictor: RandomForests Pearson Correlation: 0.6040027516191304 Spearman Correlation: 0.4861296560239233 Coefficient of Determination: 0.36433447381499207 RMSE: 0.528875917565927 NRMSE: 0.11956051035739278 MAPE: 257.31980271784846 Pearson Correlation: 0.6768078158008014 Spearman Correlation: 0.569489990183919 Coefficient of Determination: 0.44303391666723235 RMSE: 0.5025836141073503 NRMSE: 0.13577469583621957 MAPE: 209.43106914074932 Protein: TP53 x_train_column_count: 1 x_train columns: ['TP53'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 0.32516809238167405 Spearman Correlation: 0.28717437803663004 Coefficient of Determination: 0.10573428830313691 RMSE: 0.43057838556509015 NRMSE: 0.11532834754656225 MAPE: 395.9150748360344 Pearson Correlation: 0.4109115616263631 Spearman Correlation: 0.3101990049751244 Coefficient of Determination: 0.1669877225256251 RMSE: 0.37364228584578285 NRMSE: 0.12305031643200488 MAPE: 1296.9861916301586 Predictor: ElasticNet Pearson Correlation: 0.3251680923816741 Spearman Correlation: 0.28717437803663004 Coefficient of Determination: 0.10573428768504822 RMSE: 0.4305783857138914 NRMSE: 0.11532834758641795 MAPE: 395.8954001211417 Pearson Correlation: 0.41091156162636316 Spearman Correlation: 0.3101990049751244 Coefficient of Determination: 0.16698867355616853 RMSE: 0.3736420725564129 NRMSE: 0.12305024619015738 MAPE: 1296.9520936173428 Predictor: RandomForests Pearson Correlation: 0.41836058695215167 Spearman Correlation: 0.35514670974367946 Coefficient of Determination: 0.17435957320281414 RMSE: 0.4137275203739926 NRMSE: 0.11081492443390721 MAPE: 505.56269271180315 Pearson Correlation: 0.46793918082121677 Spearman Correlation: 0.28068144997753247 Coefficient of Determination: 0.21780722524703144 RMSE: 0.36206556235238085 NRMSE: 0.11923779428696882 MAPE: 1845.1105999300512 Protein: CTNNB1 x_train_column_count: 1 x_train columns: ['CTNNB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.06641728094381409 Spearman Correlation: 0.11831189699055593 Coefficient of Determination: 0.004411255207969478 RMSE: 0.7233827756464993 NRMSE: 0.14228614784549556 MAPE: 607.0010833449173 Pearson Correlation: 0.13956120176564735 Spearman Correlation: 0.1409813676714467 Coefficient of Determination: -0.11076417840848163 RMSE: 0.8078718363971094 NRMSE: 0.20105817087606317 MAPE: 216.94387718013638 Predictor: ElasticNet Pearson Correlation: 0.06641728094381409 Spearman Correlation: 0.11831189699055593 Coefficient of Determination: 0.004411255194572861 RMSE: 0.7233827756513662 NRMSE: 0.14228614784645285 MAPE: 607.002229889947 Pearson Correlation: 0.13956120176564735 Spearman Correlation: 0.1409813676714467 Coefficient of Determination: -0.11076405621511687 RMSE: 0.8078717919607732 NRMSE: 0.2010581598170213 MAPE: 216.9472783981019 Predictor: RandomForests Pearson Correlation: 0.2846108698980282 Spearman Correlation: 0.29112484755208995 Coefficient of Determination: 0.06903793114490742 RMSE: 0.6995103870594284 NRMSE: 0.13759055606991116 MAPE: 631.5545292503399 Pearson Correlation: 0.0711397534338752 Spearman Correlation: 0.14282184909213674 Coefficient of Determination: -0.1285956971281863 RMSE: 0.8143305550615784 NRMSE: 0.20266557702933685 MAPE: 489.1762361982494 Protein: CCNE1 x_train_column_count: 1 x_train columns: ['CCNE1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.7299247116090841 Spearman Correlation: 0.7061567494715154 Coefficient of Determination: 0.5327900846176046 RMSE: 0.35051079946653413 NRMSE: 0.08458884558885396 MAPE: 90.83614166716927 Pearson Correlation: 0.7770270702564801 Spearman Correlation: 0.7531411569602966 Coefficient of Determination: 0.46747886325152765 RMSE: 0.30523096808283556 NRMSE: 0.16588729725859142 MAPE: 56.09620217722176 Predictor: ElasticNet Pearson Correlation: 0.7299247116090841 Spearman Correlation: 0.7061567494715154 Coefficient of Determination: 0.5327900830485114 RMSE: 0.35051080005511764 NRMSE: 0.08458884573089694 MAPE: 90.83745445923547 Pearson Correlation: 0.77702707025648 Spearman Correlation: 0.7531411569602966 Coefficient of Determination: 0.46746331306349276 RMSE: 0.30523542458603403 NRMSE: 0.16588971928436244 MAPE: 56.09733643316592 Predictor: RandomForests Pearson Correlation: 0.8577101219397514 Spearman Correlation: 0.7101695638315398 Coefficient of Determination: 0.7317659742467798 RMSE: 0.26558424714779255 NRMSE: 0.06409350270236565 MAPE: 67.88985778990819 Pearson Correlation: 0.8351430823920907 Spearman Correlation: 0.7370836679134409 Coefficient of Determination: 0.6941548923260417 RMSE: 0.2313188038212206 NRMSE: 0.12571742445405715 MAPE: 40.56267191069466 Protein: CCND1 x_train_column_count: 1 x_train columns: ['CCND1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.42236027416892136 Spearman Correlation: 0.3945270040292828 Coefficient of Determination: 0.1783882011960466 RMSE: 0.21640426284054698 NRMSE: 0.13009598468248967 MAPE: 534.8786478153853 Pearson Correlation: 0.29695214528728026 Spearman Correlation: 0.3886206223783046 Coefficient of Determination: 0.08424001920543 RMSE: 0.2252951966327131 NRMSE: 0.17430153852255456 MAPE: 350.0330656369793 Predictor: ElasticNet Pearson Correlation: 0.42236027416892147 Spearman Correlation: 0.3945270040292828 Coefficient of Determination: 0.1783882011914798 RMSE: 0.2164042628411484 NRMSE: 0.13009598468285125 MAPE: 534.8791099383373 Pearson Correlation: 0.29695214528728026 Spearman Correlation: 0.3886206223783046 Coefficient of Determination: 0.08424001033850803 RMSE: 0.22529519772343282 NRMSE: 0.1743015393663991 MAPE: 350.03340206168946 Predictor: RandomForests Pearson Correlation: 0.5009246505960983 Spearman Correlation: 0.40965593127045014 Coefficient of Determination: 0.2468749440121255 RMSE: 0.20718868121322256 NRMSE: 0.12455584351109315 MAPE: 491.23954825070194 Pearson Correlation: 0.3225095409332166 Spearman Correlation: 0.3839087800361473 Coefficient of Determination: 0.09369217172592081 RMSE: 0.22412947187967547 NRMSE: 0.17339966568644818 MAPE: 339.86681722580477 Protein: ERBB2 x_train_column_count: 1 x_train columns: ['ERBB2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.7536423359707011 Spearman Correlation: 0.6630955260861322 Coefficient of Determination: 0.5679767705673753 RMSE: 0.6461166342040771 NRMSE: 0.11595151628664592 MAPE: 210.20197949285432 Pearson Correlation: 0.8108498416783881 Spearman Correlation: 0.5166032582187103 Coefficient of Determination: 0.6340678454836574 RMSE: 0.6395258414521928 NRMSE: 0.10895375256864795 MAPE: 809.0116931903326 Predictor: ElasticNet Pearson Correlation: 0.7536423359707011 Spearman Correlation: 0.6630955260861322 Coefficient of Determination: 0.5679767705673081 RMSE: 0.6461166342041273 NRMSE: 0.11595151628665494 MAPE: 210.2020288497246 Pearson Correlation: 0.8108498416783881 Spearman Correlation: 0.5166032582187103 Coefficient of Determination: 0.6340678114731229 RMSE: 0.6395258711716572 NRMSE: 0.10895375763184782 MAPE: 809.0118683090749 Predictor: RandomForests Pearson Correlation: 0.8389294424186137 Spearman Correlation: 0.6674393366047144 Coefficient of Determination: 0.7023030045025691 RMSE: 0.5363454470636926 NRMSE: 0.09625207671225393 MAPE: 280.2953308487789 Pearson Correlation: 0.8161121853257634 Spearman Correlation: 0.5012523821949281 Coefficient of Determination: 0.6428254688684671 RMSE: 0.63182681426791 NRMSE: 0.10764209657527812 MAPE: 1420.7544425542162 Protein: ERBB3 x_train_column_count: 1 x_train columns: ['ERBB3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.41402025545880744 Spearman Correlation: 0.4574811032948563 Coefficient of Determination: 0.17141277193017623 RMSE: 0.4051902314315764 NRMSE: 0.10934921384644226 MAPE: 181.83691718420616 Pearson Correlation: 0.38212391915057364 Spearman Correlation: 0.4416544727343674 Coefficient of Determination: 0.14278323145190197 RMSE: 0.47938761999648344 NRMSE: 0.17692256761963376 MAPE: 302.11907423555215 Predictor: ElasticNet Pearson Correlation: 0.41402025545880733 Spearman Correlation: 0.4574811032948563 Coefficient of Determination: 0.1714127718976779 RMSE: 0.4051902314395225 NRMSE: 0.10934921384858667 MAPE: 181.8364397390754 Pearson Correlation: 0.3821239191505737 Spearman Correlation: 0.4416544727343674 Coefficient of Determination: 0.1427835180208894 RMSE: 0.4793875398664385 NRMSE: 0.17692253804687738 MAPE: 302.11866059431134 Predictor: RandomForests Pearson Correlation: 0.4937926972662044 Spearman Correlation: 0.47011878226411286 Coefficient of Determination: 0.24235048330361064 RMSE: 0.38745745765908807 NRMSE: 0.10456364716462097 MAPE: 216.39720242867085 Pearson Correlation: 0.43320350506909144 Spearman Correlation: 0.44593650227107995 Coefficient of Determination: 0.18582907647625257 RMSE: 0.46719617614868336 NRMSE: 0.1724231991366529 MAPE: 360.2215328744491 Fold: 3 Protein: RB1 x_train_column_count: 1 x_train columns: ['RB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.20536425783313839 Spearman Correlation: 0.28181864803860485 Coefficient of Determination: 0.04217447839535582 RMSE: 0.23545330468119732 NRMSE: 0.08610784986878194 MAPE: 195.98495621171838 Pearson Correlation: 0.21090088456074751 Spearman Correlation: 0.26769161710245765 Coefficient of Determination: 0.022118335834523384 RMSE: 0.21919993277299263 NRMSE: 0.15380940312740687 MAPE: 232.70273205909703 Predictor: ElasticNet Pearson Correlation: 0.20536425783313839 Spearman Correlation: 0.28181864803860485 Coefficient of Determination: 0.042174472765042936 RMSE: 0.23545330537322096 NRMSE: 0.08610785012186255 MAPE: 195.91589312380776 Pearson Correlation: 0.2109008845607475 Spearman Correlation: 0.26769161710245765 Coefficient of Determination: 0.022121589206348546 RMSE: 0.2191995681381372 NRMSE: 0.1538091472684348 MAPE: 232.66458705877477 Predictor: RandomForests Pearson Correlation: 0.3151512292058805 Spearman Correlation: 0.3524539498229516 Coefficient of Determination: 0.09186867165257584 RMSE: 0.22926402724699074 NRMSE: 0.08384436338757707 MAPE: 273.67842010321056 Pearson Correlation: 0.2300590252443082 Spearman Correlation: 0.28681957460006946 Coefficient of Determination: 0.025303836965301807 RMSE: 0.2188426138644487 NRMSE: 0.15355867764882655 MAPE: 235.88853086302066 Protein: CDH1 x_train_column_count: 1 x_train columns: ['CDH1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.5061521824683969 Spearman Correlation: 0.6060433571893057 Coefficient of Determination: 0.2561900318175212 RMSE: 1.0131204376541854 NRMSE: 0.1613197728821033 MAPE: 729.5897156629053 Pearson Correlation: 0.49632021780749225 Spearman Correlation: 0.46526016533872 Coefficient of Determination: 0.21170636467694104 RMSE: 0.8359546694956114 NRMSE: 0.16434448737773982 MAPE: 349.94804563473247 Predictor: ElasticNet Pearson Correlation: 0.5061521824683969 Spearman Correlation: 0.6060433571893057 Coefficient of Determination: 0.25619003181668965 RMSE: 1.0131204376547518 NRMSE: 0.1613197728821935 MAPE: 729.58920708645 Pearson Correlation: 0.49632021780749236 Spearman Correlation: 0.46526016533872 Coefficient of Determination: 0.21170633691448093 RMSE: 0.8359546842161146 NRMSE: 0.1643444902717168 MAPE: 349.9477382828829 Predictor: RandomForests Pearson Correlation: 0.720658592011157 Spearman Correlation: 0.6176291946545054 Coefficient of Determination: 0.5189174241027371 RMSE: 0.8147791240760056 NRMSE: 0.12973776696219955 MAPE: 282.7560913470706 Pearson Correlation: 0.7353301371123111 Spearman Correlation: 0.46500928923410684 Coefficient of Determination: 0.538426650574287 RMSE: 0.63967456230514 NRMSE: 0.1257568046052648 MAPE: 186.00534358064274 Protein: CDH2 x_train_column_count: 1 x_train columns: ['CDH2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.14261277011082887 Spearman Correlation: -0.004338932550925531 Coefficient of Determination: 0.020338402198684102 RMSE: 0.37734116573013987 NRMSE: 0.13672772147624462 MAPE: 205.27568788923608 Pearson Correlation: 0.14518865407198642 Spearman Correlation: 0.23133206149702618 Coefficient of Determination: 0.0139564430879906 RMSE: 0.32965367947159396 NRMSE: 0.17369574444727484 MAPE: 675.7840877768981 Predictor: ElasticNet Pearson Correlation: 0.1426127701108289 Spearman Correlation: -0.004338932550925531 Coefficient of Determination: 0.020338401793236205 RMSE: 0.3773411658082241 NRMSE: 0.13672772150453805 MAPE: 205.28883418090302 Pearson Correlation: 0.1451886540719864 Spearman Correlation: 0.23133206149702618 Coefficient of Determination: 0.013955124643386663 RMSE: 0.3296538998624512 NRMSE: 0.17369586057203365 MAPE: 675.7746684015143 Predictor: RandomForests Pearson Correlation: 0.23493300907448675 Spearman Correlation: 0.21194477216286742 Coefficient of Determination: 0.04976239614304989 RMSE: 0.3716312713312571 NRMSE: 0.1346587692337333 MAPE: 387.79228301128836 Pearson Correlation: -0.02522530974628973 Spearman Correlation: -0.1851350763201282 Coefficient of Determination: -0.0407518659493773 RMSE: 0.33867526307154056 NRMSE: 0.17844925025372552 MAPE: 642.4010366244271 Protein: CDH3 x_train_column_count: 1 x_train columns: ['CDH3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.3026146976584992 Spearman Correlation: 0.3386347347546788 Coefficient of Determination: 0.09157565523894473 RMSE: 0.2025467087768724 NRMSE: 0.14210214175848376 MAPE: 362.2955007259328 Pearson Correlation: 0.2244036246490851 Spearman Correlation: 0.31279442387062184 Coefficient of Determination: 0.023797504951999726 RMSE: 0.18607390663573836 NRMSE: 0.16184984094195584 MAPE: 145.3763024255934 Predictor: ElasticNet Pearson Correlation: 0.3026146976584992 Spearman Correlation: 0.3386347347546788 Coefficient of Determination: 0.09157565485560071 RMSE: 0.20254670881960854 NRMSE: 0.14210214178846645 MAPE: 362.2772318015171 Pearson Correlation: 0.22440362464908511 Spearman Correlation: 0.31279442387062184 Coefficient of Determination: 0.023804995816902097 RMSE: 0.18607319271768477 NRMSE: 0.16184921996545512 MAPE: 145.37234733699452 Predictor: RandomForests Pearson Correlation: 0.38429063561532717 Spearman Correlation: 0.366929487494884 Coefficient of Determination: 0.14614884835263475 RMSE: 0.19636853167347101 NRMSE: 0.13776767390236222 MAPE: 480.79342950124743 Pearson Correlation: 0.27910731531306143 Spearman Correlation: 0.30860684283191253 Coefficient of Determination: 0.0655555461704449 RMSE: 0.1820506628174801 NRMSE: 0.15835036385874218 MAPE: 188.00773874257487 Protein: PTEN x_train_column_count: 1 x_train columns: ['PTEN'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 0.3939878545912659 Spearman Correlation: 0.4168387026449609 Coefficient of Determination: 0.15522642956542843 RMSE: 0.5783942541009418 NRMSE: 0.0904376912049006 MAPE: 436.81889349420373 Pearson Correlation: 0.3976334585902838 Spearman Correlation: 0.39053105400316723 Coefficient of Determination: 0.1461824631825106 RMSE: 0.4351761587473584 NRMSE: 0.10404441226685755 MAPE: 116.83152125957915 Predictor: ElasticNet Pearson Correlation: 0.39398785459126584 Spearman Correlation: 0.4168387026449609 Coefficient of Determination: 0.15522642921135243 RMSE: 0.5783942542221551 NRMSE: 0.0904376912238535 MAPE: 436.7966310715257 Pearson Correlation: 0.39763345859028376 Spearman Correlation: 0.39053105400316723 Coefficient of Determination: 0.1461809304458177 RMSE: 0.4351765493519889 NRMSE: 0.10404450565485318 MAPE: 116.82856858341486 Predictor: RandomForests Pearson Correlation: 0.4486456840284966 Spearman Correlation: 0.44022349775190645 Coefficient of Determination: 0.19703242003461852 RMSE: 0.5639009371276077 NRMSE: 0.08817151702409627 MAPE: 546.1899445028266 Pearson Correlation: 0.3687177757531359 Spearman Correlation: 0.405227077725146 Coefficient of Determination: 0.1312647338902646 RMSE: 0.43896135222360844 NRMSE: 0.10494939803557798 MAPE: 126.18039299878608 Protein: BRCA2 x_train_column_count: 1 x_train columns: ['BRCA2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.02959871680860385 Spearman Correlation: 0.007235394469500479 Coefficient of Determination: 0.0008760840367157963 RMSE: 0.18996688066183695 NRMSE: 0.12803418479351694 MAPE: 114.82449131210666 Pearson Correlation: -0.016054565654462914 Spearman Correlation: 0.05298569807603587 Coefficient of Determination: -0.005863409902131078 RMSE: 0.21475827190110194 NRMSE: 0.14771287504632535 MAPE: 112.83494974880834 Predictor: ElasticNet Pearson Correlation: 0.029598716808603837 Spearman Correlation: 0.007235394469500479 Coefficient of Determination: 0.0008759935925667373 RMSE: 0.18996688926006597 NRMSE: 0.12803419058856522 MAPE: 114.87279644470485 Pearson Correlation: -0.01605456565446289 Spearman Correlation: 0.05298569807603587 Coefficient of Determination: -0.0058323765362682245 RMSE: 0.21475495896449218 NRMSE: 0.14771059637558012 MAPE: 112.85176623124009 Predictor: RandomForests Pearson Correlation: 0.2847852536520081 Spearman Correlation: 0.24810712888855369 Coefficient of Determination: 0.04356944145348551 RMSE: 0.18586385299339783 NRMSE: 0.1252688195841519 MAPE: 118.71205027999494 Pearson Correlation: -0.008597785420769612 Spearman Correlation: -0.1128019880749639 Coefficient of Determination: -0.012088332481777764 RMSE: 0.2154217773299026 NRMSE: 0.14816924067838874 MAPE: 157.49003513886964 Protein: CDKN2A x_train_column_count: 1 x_train columns: ['CDKN2A'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.5076634573044784 Spearman Correlation: 0.4770131653521852 Coefficient of Determination: 0.2577221858823363 RMSE: 0.5751641428613341 NRMSE: 0.1342837464655711 MAPE: 175.6083821731667 Pearson Correlation: 0.536825509758858 Spearman Correlation: 0.5740296013666005 Coefficient of Determination: 0.2815143854042633 RMSE: 0.5565075134966199 NRMSE: 0.17180930304609918 MAPE: 120.00577215590809 Predictor: ElasticNet Pearson Correlation: 0.5076634573044785 Spearman Correlation: 0.4770131653521852 Coefficient of Determination: 0.25772218539874925 RMSE: 0.5751641430486911 NRMSE: 0.1342837465093134 MAPE: 175.61350329659197 Pearson Correlation: 0.5368255097588579 Spearman Correlation: 0.5740296013666005 Coefficient of Determination: 0.28151153227872994 RMSE: 0.5565086184486104 NRMSE: 0.17180964417542233 MAPE: 120.00745792582296 Predictor: RandomForests Pearson Correlation: 0.6245172571557215 Spearman Correlation: 0.4954089061519607 Coefficient of Determination: 0.3894788522073944 RMSE: 0.5216256263174344 NRMSE: 0.12178409280851568 MAPE: 264.11801229845923 Pearson Correlation: 0.6251797457998285 Spearman Correlation: 0.5733110855363031 Coefficient of Determination: 0.38811166296195954 RMSE: 0.5135681488886652 NRMSE: 0.15855273035369863 MAPE: 124.73179501297591 Protein: TP53 x_train_column_count: 1 x_train columns: ['TP53'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.35194198538758936 Spearman Correlation: 0.29871023780362554 Coefficient of Determination: 0.12386316107855821 RMSE: 0.4213154057090008 NRMSE: 0.10125340199687595 MAPE: 571.7401607647245 Pearson Correlation: 0.2980744477164273 Spearman Correlation: 0.2638162570605619 Coefficient of Determination: 0.07494796243869972 RMSE: 0.41400359918732 NRMSE: 0.15438160234304485 MAPE: 478.68303119434427 Predictor: ElasticNet Pearson Correlation: 0.3519419853875894 Spearman Correlation: 0.29871023780362554 Coefficient of Determination: 0.12386316051551105 RMSE: 0.4213154058443794 NRMSE: 0.10125340202941106 MAPE: 571.7187082849815 Pearson Correlation: 0.2980744477164273 Spearman Correlation: 0.2638162570605619 Coefficient of Determination: 0.07494962337970323 RMSE: 0.41400322751316854 NRMSE: 0.15438146374605882 MAPE: 478.667030158483 Predictor: RandomForests Pearson Correlation: 0.45570202069206317 Spearman Correlation: 0.35162246446507417 Coefficient of Determination: 0.2064007311866748 RMSE: 0.40097934166090254 NRMSE: 0.0963660998944731 MAPE: 818.1649159606385 Pearson Correlation: 0.2984791130638284 Spearman Correlation: 0.26907455660028845 Coefficient of Determination: 0.0658446370334902 RMSE: 0.4160356917475398 NRMSE: 0.15513936799090863 MAPE: 471.9253068166904 Protein: CTNNB1 x_train_column_count: 1 x_train columns: ['CTNNB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.051747475666367254 Spearman Correlation: 0.07873234122650967 Coefficient of Determination: 0.0026778012378414484 RMSE: 0.7681668709940904 NRMSE: 0.15109497855902645 MAPE: 433.4262364661056 Pearson Correlation: 0.21972783891735967 Spearman Correlation: 0.26859935909425303 Coefficient of Determination: 0.009575156502854565 RMSE: 0.6100286689166915 NRMSE: 0.19942746376693957 MAPE: 1336.3278344093535 Predictor: ElasticNet Pearson Correlation: 0.051747475666367275 Spearman Correlation: 0.07873234122650967 Coefficient of Determination: 0.002677801229203358 RMSE: 0.7681668709974171 NRMSE: 0.1510949785596808 MAPE: 433.42687505377376 Pearson Correlation: 0.21972783891735959 Spearman Correlation: 0.26859935909425303 Coefficient of Determination: 0.00957424818110808 RMSE: 0.6100289486462351 NRMSE: 0.1994275552146965 MAPE: 1336.3305423296326 Predictor: RandomForests Pearson Correlation: 0.28283871709746194 Spearman Correlation: 0.27248155031404964 Coefficient of Determination: 0.056911975463831976 RMSE: 0.7469885508843376 NRMSE: 0.14692929797095547 MAPE: 449.58995100093125 Pearson Correlation: 0.20590790949456775 Spearman Correlation: 0.1399556799237513 Coefficient of Determination: 0.026453487374958562 RMSE: 0.6048084295659103 NRMSE: 0.1977208897204584 MAPE: 1426.5538436896502 Protein: CCNE1 x_train_column_count: 1 x_train columns: ['CCNE1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.731155078102014 Spearman Correlation: 0.724580992574438 Coefficient of Determination: 0.5345877482343622 RMSE: 0.35640285844531305 NRMSE: 0.08601077743208076 MAPE: 77.48353179860715 Pearson Correlation: 0.6686208249928275 Spearman Correlation: 0.6712078704223245 Coefficient of Determination: 0.4364788914076564 RMSE: 0.27391475562733614 NRMSE: 0.1193164418814898 MAPE: 97.28225630852701 Predictor: ElasticNet Pearson Correlation: 0.7311550781020142 Spearman Correlation: 0.724580992574438 Coefficient of Determination: 0.5345877466043218 RMSE: 0.3564028590694382 NRMSE: 0.08601077758270101 MAPE: 77.48483952107688 Pearson Correlation: 0.6686208249928275 Spearman Correlation: 0.6712078704223245 Coefficient of Determination: 0.4364873185214214 RMSE: 0.2739127075057997 NRMSE: 0.11931554972592225 MAPE: 97.2839269864578 Predictor: RandomForests Pearson Correlation: 0.8620576959955392 Spearman Correlation: 0.7260197277689745 Coefficient of Determination: 0.7409729273935419 RMSE: 0.26588562094289714 NRMSE: 0.06416623330426845 MAPE: 55.85462183805717 Pearson Correlation: 0.7693889488812767 Spearman Correlation: 0.6683249776710507 Coefficient of Determination: 0.5225628425841873 RMSE: 0.25212646899839464 NRMSE: 0.10982552990303378 MAPE: 78.16212414126768 Protein: CCND1 x_train_column_count: 1 x_train columns: ['CCND1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.4104199362628022 Spearman Correlation: 0.40702588796834765 Coefficient of Determination: 0.16844452408196253 RMSE: 0.2231013144804463 NRMSE: 0.13412205845814423 MAPE: 532.0448309434951 Pearson Correlation: 0.37210194124289636 Spearman Correlation: 0.3490592152021846 Coefficient of Determination: 0.11233592807704806 RMSE: 0.197608097567355 NRMSE: 0.18724768325296826 MAPE: 345.71587846750236 Predictor: ElasticNet Pearson Correlation: 0.4104199362628022 Spearman Correlation: 0.40702588796834765 Coefficient of Determination: 0.16844452407777666 RMSE: 0.2231013144810078 NRMSE: 0.13412205845848182 MAPE: 532.0452559001382 Pearson Correlation: 0.3721019412428963 Spearman Correlation: 0.3490592152021846 Coefficient of Determination: 0.11233569761335793 RMSE: 0.1976081232197892 NRMSE: 0.18724770756046846 MAPE: 345.71646825965604 Predictor: RandomForests Pearson Correlation: 0.48699822442771834 Spearman Correlation: 0.43302356100040734 Coefficient of Determination: 0.2329800130729628 RMSE: 0.21426925304637665 NRMSE: 0.12881247853601416 MAPE: 532.0829627883396 Pearson Correlation: 0.3682241478957792 Spearman Correlation: 0.3545397794492318 Coefficient of Determination: 0.12538407752351843 RMSE: 0.19615035827191662 NRMSE: 0.18586637191391944 MAPE: 242.12255902019984 Protein: ERBB2 x_train_column_count: 1 x_train columns: ['ERBB2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 0.7576307424036323 Spearman Correlation: 0.6175542476381123 Coefficient of Determination: 0.5740043418350786 RMSE: 0.6404358362682986 NRMSE: 0.1091087851624953 MAPE: 320.7122473043478 Pearson Correlation: 0.7901604979795929 Spearman Correlation: 0.693151651706485 Coefficient of Determination: 0.6172623825300021 RMSE: 0.6598241207246933 NRMSE: 0.11902448241660533 MAPE: 141.8418124310344 Predictor: ElasticNet Pearson Correlation: 0.7576307424036322 Spearman Correlation: 0.6175542476381123 Coefficient of Determination: 0.574004341835005 RMSE: 0.640435836268354 NRMSE: 0.10910878516250473 MAPE: 320.7123220309669 Pearson Correlation: 0.7901604979795926 Spearman Correlation: 0.693151651706485 Coefficient of Determination: 0.6172624351920195 RMSE: 0.6598240753311013 NRMSE: 0.1190244742281372 MAPE: 141.84184829396668 Predictor: RandomForests Pearson Correlation: 0.819999050484025 Spearman Correlation: 0.6221160255281639 Coefficient of Determination: 0.670233501848126 RMSE: 0.5634771446431789 NRMSE: 0.09599760543863893 MAPE: 549.6016379139868 Pearson Correlation: 0.8604407371645879 Spearman Correlation: 0.6851291397706071 Coefficient of Determination: 0.7380335646767575 RMSE: 0.5458840920255202 NRMSE: 0.09847104625613685 MAPE: 202.52741537438453 Protein: ERBB3 x_train_column_count: 1 x_train columns: ['ERBB3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.4118347805352837 Spearman Correlation: 0.4548855783210745 Coefficient of Determination: 0.1696078864585454 RMSE: 0.4109815959703826 NRMSE: 0.14902138098256357 MAPE: 205.9352300488748 Pearson Correlation: 0.39517943353034346 Spearman Correlation: 0.4259180289031036 Coefficient of Determination: 0.13282016833206411 RMSE: 0.4606972196012416 NRMSE: 0.12808708406234562 MAPE: 147.06597736539783 Predictor: ElasticNet Pearson Correlation: 0.4118347805352838 Spearman Correlation: 0.4548855783210745 Coefficient of Determination: 0.16960788642884905 RMSE: 0.41098159597773126 NRMSE: 0.14902138098522819 MAPE: 205.93491786104846 Pearson Correlation: 0.39517943353034346 Spearman Correlation: 0.4259180289031036 Coefficient of Determination: 0.13282001253745668 RMSE: 0.46069726098489505 NRMSE: 0.12808709556819212 MAPE: 147.06531071346663 Predictor: RandomForests Pearson Correlation: 0.4999772787130882 Spearman Correlation: 0.47145580278027005 Coefficient of Determination: 0.24936566604040078 RMSE: 0.39074639408774725 NRMSE: 0.14168412364895636 MAPE: 239.36369085083874 Pearson Correlation: 0.40632927276753494 Spearman Correlation: 0.4286995163716889 Coefficient of Determination: 0.13799826967697426 RMSE: 0.45931970330957334 NRMSE: 0.1277040948938829 MAPE: 166.28304846884032 Fold: 4 Protein: RB1 x_train_column_count: 1 x_train columns: ['RB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.20060321424304425 Spearman Correlation: 0.2604333098848863 Coefficient of Determination: 0.040241649564640825 RMSE: 0.2463982702627586 NRMSE: 0.09011054354255361 MAPE: 268.4274131355909 Pearson Correlation: 0.30291776516862734 Spearman Correlation: 0.3658524420503997 Coefficient of Determination: 0.0009212273884317002 RMSE: 0.16480638458270389 NRMSE: 0.15790287105996234 MAPE: 110.48529460613341 Predictor: ElasticNet Pearson Correlation: 0.20060321424304423 Spearman Correlation: 0.2604333098848863 Coefficient of Determination: 0.04024164460534618 RMSE: 0.2463982708993572 NRMSE: 0.09011054377536469 MAPE: 268.3497274814239 Pearson Correlation: 0.30291776516862734 Spearman Correlation: 0.3658524420503997 Coefficient of Determination: 0.0009300459157621788 RMSE: 0.16480565723624552 NRMSE: 0.15790217418105001 MAPE: 110.47272546768954 Predictor: RandomForests Pearson Correlation: 0.3354716659774619 Spearman Correlation: 0.36872499080973353 Coefficient of Determination: 0.09970165657844221 RMSE: 0.23864367620422963 NRMSE: 0.08727460364402781 MAPE: 320.1667713812272 Pearson Correlation: 0.2489237660453198 Spearman Correlation: 0.34152871277647523 Coefficient of Determination: -0.03633114959068817 RMSE: 0.16785081043222436 NRMSE: 0.16081977008414552 MAPE: 112.5832654307591 Protein: CDH1 x_train_column_count: 1 x_train columns: ['CDH1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 0.5112589407667545 Spearman Correlation: 0.6035344748233071 Coefficient of Determination: 0.2613857045139436 RMSE: 0.9617082199179806 NRMSE: 0.15313337472022873 MAPE: 736.7428771637664 Pearson Correlation: 0.467547599084504 Spearman Correlation: 0.44892080948640256 Coefficient of Determination: 0.18511913871768682 RMSE: 1.0529605857943893 NRMSE: 0.1910236540391113 MAPE: 375.5212677418342 Predictor: ElasticNet Pearson Correlation: 0.5112589407667545 Spearman Correlation: 0.6035344748233071 Coefficient of Determination: 0.26138570451288046 RMSE: 0.9617082199186728 NRMSE: 0.15313337472033897 MAPE: 736.7422694789874 Pearson Correlation: 0.46754759908450405 Spearman Correlation: 0.44892080948640256 Coefficient of Determination: 0.18511929025152762 RMSE: 1.0529604878910166 NRMSE: 0.19102363627789568 MAPE: 375.52110416513085 Predictor: RandomForests Pearson Correlation: 0.7087465928671025 Spearman Correlation: 0.6151147498515491 Coefficient of Determination: 0.5020692188726259 RMSE: 0.7896214925151644 NRMSE: 0.12573190225075068 MAPE: 347.50739803543973 Pearson Correlation: 0.7565120663505035 Spearman Correlation: 0.44363902379888376 Coefficient of Determination: 0.5235914114602802 RMSE: 0.8051093072939526 NRMSE: 0.1460595238369349 MAPE: 167.38169848454703 Protein: CDH2 x_train_column_count: 1 x_train columns: ['CDH2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.12726575412288094 Spearman Correlation: 0.07146547137499795 Coefficient of Determination: 0.016196572172465618 RMSE: 0.3762787992251089 NRMSE: 0.13634277818142942 MAPE: 647.0463099258229 Pearson Correlation: 0.20599048693772695 Spearman Correlation: -0.07145475629371938 Coefficient of Determination: -0.018662252249238565 RMSE: 0.3363624137974115 NRMSE: 0.17351864027351918 MAPE: 149.9789550533449 Predictor: ElasticNet Pearson Correlation: 0.12726575412288096 Spearman Correlation: 0.07146547137499795 Coefficient of Determination: 0.016196571640589186 RMSE: 0.37627879932682323 NRMSE: 0.1363427782182851 MAPE: 647.0576024219794 Pearson Correlation: 0.20599048693772695 Spearman Correlation: -0.07145475629371938 Coefficient of Determination: -0.018663364567124807 RMSE: 0.3363625974411198 NRMSE: 0.1735187350094506 MAPE: 149.979760948571 Predictor: RandomForests Pearson Correlation: 0.20068017063291904 Spearman Correlation: 0.19591540058773488 Coefficient of Determination: 0.035911956927223376 RMSE: 0.37248941165378463 NRMSE: 0.13496971217254317 MAPE: 884.409767131594 Pearson Correlation: 0.13975849733951237 Spearman Correlation: -0.007879855739278996 Coefficient of Determination: -0.03649031714906359 RMSE: 0.33929306149406074 NRMSE: 0.1750304679408922 MAPE: 184.58079283105226 Protein: CDH3 x_train_column_count: 1 x_train columns: ['CDH3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.2585402732845947 Spearman Correlation: 0.3309265441567785 Coefficient of Determination: 0.06684307291007296 RMSE: 0.1989092319417179 NRMSE: 0.14176007521823758 MAPE: 172.41137432224957 Pearson Correlation: 0.4135532481751862 Spearman Correlation: 0.3220264591827829 Coefficient of Determination: 0.04254022099449484 RMSE: 0.2033283136396012 NRMSE: 0.18097113911351723 MAPE: 586.8030112709794 Predictor: ElasticNet Pearson Correlation: 0.25854027328459467 Spearman Correlation: 0.3309265441567785 Coefficient of Determination: 0.06684307254477051 RMSE: 0.19890923198065136 NRMSE: 0.14176007524598497 MAPE: 172.40226966614551 Pearson Correlation: 0.4135532481751863 Spearman Correlation: 0.3220264591827829 Coefficient of Determination: 0.04253292702053457 RMSE: 0.20332908812048964 NRMSE: 0.18097182843556045 MAPE: 586.7738689126844 Predictor: RandomForests Pearson Correlation: 0.3661650806172687 Spearman Correlation: 0.35439273671084043 Coefficient of Determination: 0.13219300783029397 RMSE: 0.19181791710406904 NRMSE: 0.13670618548688587 MAPE: 233.9258036788603 Pearson Correlation: 0.3409632548764403 Spearman Correlation: 0.30228083799903893 Coefficient of Determination: 0.027424343098695014 RMSE: 0.20492704927339866 NRMSE: 0.18239408412108035 MAPE: 815.7562828804256 Protein: PTEN x_train_column_count: 1 x_train columns: ['PTEN'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 0.3977067357792478 Spearman Correlation: 0.4125541754874478 Coefficient of Determination: 0.15817064768418443 RMSE: 0.5154414074592556 NRMSE: 0.09970624563975078 MAPE: 259.16907417773587 Pearson Correlation: 0.4352330047258671 Spearman Correlation: 0.4688213069988404 Coefficient of Determination: 0.15805245626297648 RMSE: 0.6841191398264946 NRMSE: 0.10696882805511604 MAPE: 602.3780358417006 Predictor: ElasticNet Pearson Correlation: 0.39770673577924787 Spearman Correlation: 0.4125541754874478 Coefficient of Determination: 0.15817064722837793 RMSE: 0.5154414075987979 NRMSE: 0.09970624566674363 MAPE: 259.1569919992023 Pearson Correlation: 0.4352330047258671 Spearman Correlation: 0.4688213069988404 Coefficient of Determination: 0.158047575125432 RMSE: 0.6841211228923064 NRMSE: 0.10696913812716854 MAPE: 602.3329805555614 Predictor: RandomForests Pearson Correlation: 0.4480104956483391 Spearman Correlation: 0.4392262058963344 Coefficient of Determination: 0.19430775807159506 RMSE: 0.5042569155059734 NRMSE: 0.09754273357822141 MAPE: 267.30505802947863 Pearson Correlation: 0.436932308042635 Spearman Correlation: 0.47224052214471246 Coefficient of Determination: 0.1541849426458075 RMSE: 0.6856886013856142 NRMSE: 0.10721422897124762 MAPE: 505.4868401346051 Protein: BRCA2 x_train_column_count: 1 x_train columns: ['BRCA2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.02188802695411087 Spearman Correlation: 0.01572029885733223 Coefficient of Determination: 0.0004790857239437285 RMSE: 0.19175131820913427 NRMSE: 0.12353120838082414 MAPE: 111.96124715993699 Pearson Correlation: -0.17899779266858884 Spearman Correlation: -0.15346076634372002 Coefficient of Determination: -0.006876659817144359 RMSE: 0.20882170225143312 NRMSE: 0.20287542358612384 MAPE: 141.83179502022946 Predictor: ElasticNet Pearson Correlation: 0.02188802695411087 Spearman Correlation: 0.01572029885733223 Coefficient of Determination: 0.000479004062040711 RMSE: 0.19175132604227565 NRMSE: 0.12353121342713845 MAPE: 111.88965071418625 Pearson Correlation: -0.17899779266858884 Spearman Correlation: -0.15346076634372002 Coefficient of Determination: -0.006782440963589265 RMSE: 0.20881193173908402 NRMSE: 0.20286593129288943 MAPE: 141.75386815240824 Predictor: RandomForests Pearson Correlation: 0.29756859130815233 Spearman Correlation: 0.22793522807235775 Coefficient of Determination: 0.0436784830702307 RMSE: 0.18756179440287882 NRMSE: 0.1208322077003568 MAPE: 118.66940252409964 Pearson Correlation: -0.019302508339210173 Spearman Correlation: -0.026935047913685145 Coefficient of Determination: -0.00923731427144081 RMSE: 0.20906635350900685 NRMSE: 0.20311310830459905 MAPE: 117.40974708408407 Protein: CDKN2A x_train_column_count: 1 x_train columns: ['CDKN2A'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.5089092587161527 Spearman Correlation: 0.5043429685491743 Coefficient of Determination: 0.25898863360702407 RMSE: 0.5801540740130321 NRMSE: 0.13115272386414198 MAPE: 151.69847511497275 Pearson Correlation: 0.5446033666939744 Spearman Correlation: 0.4884824000299256 Coefficient of Determination: 0.27768842431664753 RMSE: 0.5360041640704614 NRMSE: 0.1614956806479245 MAPE: 114.74866140595381 Predictor: ElasticNet Pearson Correlation: 0.5089092587161527 Spearman Correlation: 0.5043429685491743 Coefficient of Determination: 0.2589886331400336 RMSE: 0.5801540741958406 NRMSE: 0.13115272390546864 MAPE: 151.7030582329283 Pearson Correlation: 0.5446033666939745 Spearman Correlation: 0.4884824000299256 Coefficient of Determination: 0.27768600309880576 RMSE: 0.5360050624236108 NRMSE: 0.16149595131774958 MAPE: 114.75142807953264 Predictor: RandomForests Pearson Correlation: 0.6315021316579708 Spearman Correlation: 0.5175085850702341 Coefficient of Determination: 0.39829848360987263 RMSE: 0.5227830094552866 NRMSE: 0.11818311505714627 MAPE: 286.8091880382585 Pearson Correlation: 0.6229828385819468 Spearman Correlation: 0.48235825210423916 Coefficient of Determination: 0.3606879562454919 RMSE: 0.5042690563417233 NRMSE: 0.1519340332454725 MAPE: 126.41263181421061 Protein: TP53 x_train_column_count: 1 x_train columns: ['TP53'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 0.33276518507002034 Spearman Correlation: 0.2833861559156332 Coefficient of Determination: 0.11073266839468499 RMSE: 0.4244667448515205 NRMSE: 0.10201075338897395 MAPE: 641.5008293378112 Pearson Correlation: 0.38347322576941034 Spearman Correlation: 0.31250015586229263 Coefficient of Determination: 0.13973962670370033 RMSE: 0.4005069165046591 NRMSE: 0.12709663509287225 MAPE: 193.4309040992592 Predictor: ElasticNet Pearson Correlation: 0.33276518507002045 Spearman Correlation: 0.2833861559156332 Coefficient of Determination: 0.11073266783885682 RMSE: 0.424466744984175 NRMSE: 0.10201075342085437 MAPE: 641.4753637904593 Pearson Correlation: 0.3834732257694103 Spearman Correlation: 0.31250015586229263 Coefficient of Determination: 0.1397359814548117 RMSE: 0.40050776505347696 NRMSE: 0.12709690437086726 MAPE: 193.4299873093621 Predictor: RandomForests Pearson Correlation: 0.4344928815774183 Spearman Correlation: 0.33659916441779625 Coefficient of Determination: 0.1871563068639337 RMSE: 0.40581773432610707 NRMSE: 0.09752889553619493 MAPE: 838.6185787542784 Pearson Correlation: 0.4387149159844563 Spearman Correlation: 0.25378423849339315 Coefficient of Determination: 0.18089051627022013 RMSE: 0.3908103335422206 NRMSE: 0.12401952701898343 MAPE: 229.84517702837385 Protein: CTNNB1 x_train_column_count: 1 x_train columns: ['CTNNB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.10830589448220497 Spearman Correlation: 0.13480386712524542 Coefficient of Determination: 0.0117301667795906 RMSE: 0.7072419451207151 NRMSE: 0.17081488385680496 MAPE: 573.4555778410324 Pearson Correlation: -0.09138017300424386 Spearman Correlation: 0.03373358770059477 Coefficient of Determination: -0.16797040045743095 RMSE: 0.8672338240312909 NRMSE: 0.1823298763836706 MAPE: 970.1379641339553 Predictor: ElasticNet Pearson Correlation: 0.10830589448220491 Spearman Correlation: 0.13480386712524542 Coefficient of Determination: 0.011730166768875172 RMSE: 0.7072419451245493 NRMSE: 0.17081488385773097 MAPE: 573.4573290631525 Pearson Correlation: -0.09138017300424374 Spearman Correlation: 0.03373358770059477 Coefficient of Determination: -0.16796966211836417 RMSE: 0.8672335499178745 NRMSE: 0.18232981875323237 MAPE: 970.1367588323346 Predictor: RandomForests Pearson Correlation: 0.27073272495551043 Spearman Correlation: 0.25332746502304954 Coefficient of Determination: 0.05488063472280302 RMSE: 0.6916295995789115 NRMSE: 0.16704415022193786 MAPE: 598.8045248717256 Pearson Correlation: 0.07267382808851819 Spearman Correlation: 0.13823949839064295 Coefficient of Determination: -0.133416084696651 RMSE: 0.8543089877843627 NRMSE: 0.17961251950726656 MAPE: 916.3275962998433 Protein: CCNE1 x_train_column_count: 1 x_train columns: ['CCNE1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.7284659471489124 Spearman Correlation: 0.7105645817584747 Coefficient of Determination: 0.5306626361555623 RMSE: 0.345832377321277 NRMSE: 0.08345980098010883 MAPE: 76.12495494477345 Pearson Correlation: 0.8235508887291154 Spearman Correlation: 0.7249192633324606 Coefficient of Determination: 0.47728890438008065 RMSE: 0.32685706405279036 NRMSE: 0.13337838245849604 MAPE: 111.11211553521782 Predictor: ElasticNet Pearson Correlation: 0.7284659471489122 Spearman Correlation: 0.7105645817584747 Coefficient of Determination: 0.5306626345345026 RMSE: 0.3458323779185179 NRMSE: 0.08345980112424112 MAPE: 76.12616468363554 Pearson Correlation: 0.8235508887291156 Spearman Correlation: 0.7249192633324606 Coefficient of Determination: 0.47726996160433044 RMSE: 0.32686298656335566 NRMSE: 0.13338079921788776 MAPE: 111.11379686950973 Predictor: RandomForests Pearson Correlation: 0.8558319038801104 Spearman Correlation: 0.7158571558170889 Coefficient of Determination: 0.7288377951807345 RMSE: 0.26286796528567175 NRMSE: 0.06343798182437718 MAPE: 55.5244048092431 Pearson Correlation: 0.8456838474620257 Spearman Correlation: 0.7088274541368929 Coefficient of Determination: 0.7022821756292825 RMSE: 0.24667744086523613 NRMSE: 0.10066001830785773 MAPE: 69.87901290517232 Protein: CCND1 x_train_column_count: 1 x_train columns: ['CCND1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 0.36603283831856065 Spearman Correlation: 0.3728160125831736 Coefficient of Determination: 0.13398003872754172 RMSE: 0.22363030380370164 NRMSE: 0.14287467819456795 MAPE: 537.6675814363354 Pearson Correlation: 0.601289204395813 Spearman Correlation: 0.49870696642102774 Coefficient of Determination: 0.2634898198839728 RMSE: 0.19652978093467904 NRMSE: 0.12394663277918709 MAPE: 467.70418773534425 Predictor: ElasticNet Pearson Correlation: 0.36603283831856076 Spearman Correlation: 0.3728160125831736 Coefficient of Determination: 0.13398003872291553 RMSE: 0.22363030380429894 NRMSE: 0.14287467819494953 MAPE: 537.6681012207774 Pearson Correlation: 0.6012892043958127 Spearman Correlation: 0.49870696642102774 Coefficient of Determination: 0.2634887612216068 RMSE: 0.19652992218093315 NRMSE: 0.12394672185982163 MAPE: 467.70426815126126 Predictor: RandomForests Pearson Correlation: 0.4536960474814516 Spearman Correlation: 0.39958941232777434 Coefficient of Determination: 0.2019813527443235 RMSE: 0.2146709224136968 NRMSE: 0.1371506385132421 MAPE: 504.6727797801616 Pearson Correlation: 0.5244663896500242 Spearman Correlation: 0.5018856606099847 Coefficient of Determination: 0.2568204270681399 RMSE: 0.1974176032612837 NRMSE: 0.12450656108809517 MAPE: 425.3854561538555 Protein: ERBB2 x_train_column_count: 1 x_train columns: ['ERBB2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 0.7679926094943187 Spearman Correlation: 0.6238582415521245 Coefficient of Determination: 0.589812648237893 RMSE: 0.6281778902672617 NRMSE: 0.10702044231685805 MAPE: 245.32123041369846 Pearson Correlation: 0.7633533110364072 Spearman Correlation: 0.67230847305938 Coefficient of Determination: 0.5282240041870256 RMSE: 0.7120439365596681 NRMSE: 0.12821765703166854 MAPE: 138.24387579417407 Predictor: ElasticNet Pearson Correlation: 0.7679926094943188 Spearman Correlation: 0.6238582415521245 Coefficient of Determination: 0.5898126482378236 RMSE: 0.6281778902673147 NRMSE: 0.1070204423168671 MAPE: 245.3213005697257 Pearson Correlation: 0.7633533110364072 Spearman Correlation: 0.67230847305938 Coefficient of Determination: 0.5282240218749861 RMSE: 0.7120439232115906 NRMSE: 0.12821765462808202 MAPE: 138.24384486469526 Predictor: RandomForests Pearson Correlation: 0.837912110164944 Spearman Correlation: 0.6242468308358713 Coefficient of Determination: 0.7012149842957249 RMSE: 0.5361310018094477 NRMSE: 0.09133873993721106 MAPE: 438.3412943231485 Pearson Correlation: 0.7903040042412042 Spearman Correlation: 0.6588300179349611 Coefficient of Determination: 0.5700413694558568 RMSE: 0.6797546826519252 NRMSE: 0.12240333537147066 MAPE: 216.94371412894742 Protein: ERBB3 x_train_column_count: 1 x_train columns: ['ERBB3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.4247436800277297 Spearman Correlation: 0.47559620013365334 Coefficient of Determination: 0.18040719372349834 RMSE: 0.4324826739468878 NRMSE: 0.1182554567706047 MAPE: 212.587948489823 Pearson Correlation: 0.3203755812394411 Spearman Correlation: 0.3203655905933989 Coefficient of Determination: 0.05473559454273058 RMSE: 0.373907581665535 NRMSE: 0.18403952495510342 MAPE: 193.72127463105815 Predictor: ElasticNet Pearson Correlation: 0.4247436800277296 Spearman Correlation: 0.47559620013365334 Coefficient of Determination: 0.18040719369690272 RMSE: 0.4324826739539047 NRMSE: 0.11825545677252336 MAPE: 212.58759016688913 Pearson Correlation: 0.3203755812394411 Spearman Correlation: 0.3203655905933989 Coefficient of Determination: 0.05473825693353351 RMSE: 0.3739070550992104 NRMSE: 0.18403926577604157 MAPE: 193.7204812200924 Predictor: RandomForests Pearson Correlation: 0.5017575914848379 Spearman Correlation: 0.4921605147487151 Coefficient of Determination: 0.2503000193256526 RMSE: 0.41363129949439237 NRMSE: 0.11310085051484675 MAPE: 238.28030543478857 Pearson Correlation: 0.4041323955475392 Spearman Correlation: 0.32032765592468015 Coefficient of Determination: 0.13857368373267354 RMSE: 0.3569412060034264 NRMSE: 0.1756885744256825 MAPE: 237.4408613379951 Fold: 5 Protein: RB1 x_train_column_count: 1 x_train columns: ['RB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.19578397808916828 Spearman Correlation: 0.27154453701595577 Coefficient of Determination: 0.03833136607641996 RMSE: 0.2293783103983448 NRMSE: 0.11331632788682353 MAPE: 190.66146768633735 Pearson Correlation: 0.22446261577437424 Spearman Correlation: 0.28244990585917534 Coefficient of Determination: -0.04417148888267075 RMSE: 0.2456208902483007 NRMSE: 0.12384329823140022 MAPE: 394.3427181483698 Predictor: ElasticNet Pearson Correlation: 0.19578397808916828 Spearman Correlation: 0.27154453701595577 Coefficient of Determination: 0.03833136053280506 RMSE: 0.22937831105947948 NRMSE: 0.11331632821343397 MAPE: 190.61928493039167 Pearson Correlation: 0.22446261577437424 Spearman Correlation: 0.28244990585917534 Coefficient of Determination: -0.044185956830937734 RMSE: 0.24562259189312707 NRMSE: 0.1238441562093495 MAPE: 394.21266644354876 Predictor: RandomForests Pearson Correlation: 0.3145025462633167 Spearman Correlation: 0.35956151450924767 Coefficient of Determination: 0.09132386711635232 RMSE: 0.22296884509436773 NRMSE: 0.11014995583227584 MAPE: 211.2056067728131 Pearson Correlation: 0.21123097353652284 Spearman Correlation: 0.23779555867019272 Coefficient of Determination: -0.04878630534383244 RMSE: 0.24616306445127475 NRMSE: 0.12411666521351812 MAPE: 529.0921149732138 Protein: CDH1 x_train_column_count: 1 x_train columns: ['CDH1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.5196914427945496 Spearman Correlation: 0.5889053256204806 Coefficient of Determination: 0.2700791957138807 RMSE: 0.9620648244803076 NRMSE: 0.15319015707784903 MAPE: 328.06178542445844 Pearson Correlation: 0.43507394591186765 Spearman Correlation: 0.5418695993715633 Coefficient of Determination: 0.18623570683890045 RMSE: 1.0479997207832101 NRMSE: 0.2060922539936698 MAPE: 1775.0378417218944 Predictor: ElasticNet Pearson Correlation: 0.5196914427945497 Spearman Correlation: 0.5889053256204806 Coefficient of Determination: 0.270079195712971 RMSE: 0.9620648244809071 NRMSE: 0.1531901570779445 MAPE: 328.0614584520568 Pearson Correlation: 0.43507394591186754 Spearman Correlation: 0.5418695993715633 Coefficient of Determination: 0.18623563071642613 RMSE: 1.0479997698000636 NRMSE: 0.20609226363297942 MAPE: 1775.0364632722126 Predictor: RandomForests Pearson Correlation: 0.7477132730675663 Spearman Correlation: 0.5990881223566048 Coefficient of Determination: 0.5587490298670774 RMSE: 0.7480132684931943 NRMSE: 0.11910659986834722 MAPE: 166.2197926101653 Pearson Correlation: 0.616013622220581 Spearman Correlation: 0.5412740364706119 Coefficient of Determination: 0.3622554955236724 RMSE: 0.9277590822668783 NRMSE: 0.1824465757343766 MAPE: 665.3142844496236 Protein: CDH2 x_train_column_count: 1 x_train columns: ['CDH2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.13776475523400486 Spearman Correlation: 0.07886292148061753 Coefficient of Determination: 0.018979127784685246 RMSE: 0.35571203306038285 NRMSE: 0.17470263398673092 MAPE: 224.04769634015378 Pearson Correlation: 0.15378835582174144 Spearman Correlation: -0.1015076266632875 Coefficient of Determination: 0.0039633951866197 RMSE: 0.41626420394603847 NRMSE: 0.15566224929268682 MAPE: 221.01005293528243 Predictor: ElasticNet Pearson Correlation: 0.13776475523400486 Spearman Correlation: 0.07886292148061753 Coefficient of Determination: 0.01897912689749548 RMSE: 0.3557120332212275 NRMSE: 0.17470263406572736 MAPE: 224.04087181335765 Pearson Correlation: 0.15378835582174144 Spearman Correlation: -0.1015076266632875 Coefficient of Determination: 0.0039722515057042385 RMSE: 0.4162623533228833 NRMSE: 0.1556615572510455 MAPE: 221.09098232805096 Predictor: RandomForests Pearson Correlation: 0.2225680543160313 Spearman Correlation: 0.23310447235810897 Coefficient of Determination: 0.04505475310564411 RMSE: 0.3509527652907008 NRMSE: 0.17236519094872588 MAPE: 516.3906532757959 Pearson Correlation: 0.02613563430060784 Spearman Correlation: 0.01272366311076386 Coefficient of Determination: -0.02965335260008506 RMSE: 0.42323047837424443 NRMSE: 0.15826729180272028 MAPE: 421.1178441241013 Protein: CDH3 x_train_column_count: 1 x_train columns: ['CDH3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.29131399778415096 Spearman Correlation: 0.34098087037844793 Coefficient of Determination: 0.08486384530498425 RMSE: 0.19492986872803375 NRMSE: 0.13675834085987662 MAPE: 331.7978221036521 Pearson Correlation: 0.2652922331797278 Spearman Correlation: 0.2942804773126847 Coefficient of Determination: 0.06608133810210592 RMSE: 0.21588497653392935 NRMSE: 0.19477347913092807 MAPE: 122.6548483564521 Predictor: ElasticNet Pearson Correlation: 0.29131399778415085 Spearman Correlation: 0.34098087037844793 Coefficient of Determination: 0.08486384490706 RMSE: 0.19492986877041393 NRMSE: 0.1367583408896096 MAPE: 331.7803947121274 Pearson Correlation: 0.2652922331797278 Spearman Correlation: 0.2942804773126847 Coefficient of Determination: 0.06608112336033933 RMSE: 0.21588500135382024 NRMSE: 0.19477350152366968 MAPE: 122.65180027927234 Predictor: RandomForests Pearson Correlation: 0.3697002386602205 Spearman Correlation: 0.3702285475555668 Coefficient of Determination: 0.13532228695214488 RMSE: 0.18947969027848924 NRMSE: 0.13293462022119973 MAPE: 428.8692666441503 Pearson Correlation: 0.33392383751857757 Spearman Correlation: 0.2896321859679133 Coefficient of Determination: 0.1080813307623334 RMSE: 0.21097476953916952 NRMSE: 0.190343443678822 MAPE: 147.6576392773054 Protein: PTEN x_train_column_count: 1 x_train columns: ['PTEN'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 0.391593982462277 Spearman Correlation: 0.4204847775371454 Coefficient of Determination: 0.15334584710066612 RMSE: 0.5235839613948132 NRMSE: 0.0818675570940213 MAPE: 374.0016579382347 Pearson Correlation: 0.41821598782319513 Spearman Correlation: 0.428546490604621 Coefficient of Determination: 0.17098186795904924 RMSE: 0.657115104950897 NRMSE: 0.12711140222665138 MAPE: 260.87198654659664 Predictor: ElasticNet Pearson Correlation: 0.3915939824622769 Spearman Correlation: 0.4204847775371454 Coefficient of Determination: 0.153345846581606 RMSE: 0.5235839615553106 NRMSE: 0.08186755711911665 MAPE: 373.9740315021285 Pearson Correlation: 0.41821598782319513 Spearman Correlation: 0.428546490604621 Coefficient of Determination: 0.1709802089117014 RMSE: 0.657115762466387 NRMSE: 0.12711152941550352 MAPE: 260.86900120540497 Predictor: RandomForests Pearson Correlation: 0.4424713683162719 Spearman Correlation: 0.4429013674143712 Coefficient of Determination: 0.19271961505571344 RMSE: 0.5112643528819989 NRMSE: 0.07994126383894909 MAPE: 489.48198787226653 Pearson Correlation: 0.41212981082810396 Spearman Correlation: 0.4375929794326208 Coefficient of Determination: 0.16319084645398674 RMSE: 0.6601956321145211 NRMSE: 0.12770729497727507 MAPE: 405.69028821943914 Protein: BRCA2 x_train_column_count: 1 x_train columns: ['BRCA2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.04257688357170661 Spearman Correlation: 0.04263289576165543 Coefficient of Determination: 0.001812791014678683 RMSE: 0.2002864149428469 NRMSE: 0.12902974066216583 MAPE: 117.45509124942069 Pearson Correlation: -0.05594746148278145 Spearman Correlation: -0.039903240688786645 Coefficient of Determination: -0.10801167417699364 RMSE: 0.1748273035203661 NRMSE: 0.2286370280786845 MAPE: 113.2596902266769 Predictor: ElasticNet Pearson Correlation: 0.04257688357170663 Spearman Correlation: 0.04263289576165543 Coefficient of Determination: 0.0018127199234500013 RMSE: 0.20028642207507968 NRMSE: 0.1290297452569365 MAPE: 117.35171000745437 Pearson Correlation: -0.055947461482781444 Spearman Correlation: -0.039903240688786645 Coefficient of Determination: -0.10791142819447708 RMSE: 0.17481939469970864 NRMSE: 0.22862668501890882 MAPE: 113.18000815772851 Predictor: RandomForests Pearson Correlation: 0.28059584900533835 Spearman Correlation: 0.22582466256683859 Coefficient of Determination: 0.04202793746016242 RMSE: 0.1962103509783002 NRMSE: 0.1264038337756806 MAPE: 124.03279629118732 Pearson Correlation: -0.08084835885705399 Spearman Correlation: -0.009163349322339706 Coefficient of Determination: -0.11690642357710335 RMSE: 0.1755276285743108 NRMSE: 0.22955290469405715 MAPE: 121.66442003308069 Protein: CDKN2A x_train_column_count: 1 x_train columns: ['CDKN2A'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 0.562261597610525 Spearman Correlation: 0.543492990453 Coefficient of Determination: 0.3161381041475396 RMSE: 0.5620739578150543 NRMSE: 0.14312697863946788 MAPE: 133.395167504575 Pearson Correlation: 0.31254093595626364 Spearman Correlation: 0.30912355515654816 Coefficient of Determination: -0.034290596238451654 RMSE: 0.6162510956633008 NRMSE: 0.1550668316507639 MAPE: 231.46523896428158 Predictor: ElasticNet Pearson Correlation: 0.5622615976105251 Spearman Correlation: 0.543492990453 Coefficient of Determination: 0.3161381036518295 RMSE: 0.5620739580187694 NRMSE: 0.14312697869134205 MAPE: 133.39986156125664 Pearson Correlation: 0.3125409359562636 Spearman Correlation: 0.30912355515654816 Coefficient of Determination: -0.034271537377496886 RMSE: 0.6162454178112082 NRMSE: 0.15506540293681795 MAPE: 231.46596213529503 Predictor: RandomForests Pearson Correlation: 0.6804985222571751 Spearman Correlation: 0.5578792484186119 Coefficient of Determination: 0.4625852388380224 RMSE: 0.4982692159571973 NRMSE: 0.12687968627159923 MAPE: 263.8935646704191 Pearson Correlation: 0.3800441671847586 Spearman Correlation: 0.31043525603050665 Coefficient of Determination: -0.060342568086227955 RMSE: 0.6239639730831126 NRMSE: 0.15700761759470386 MAPE: 482.2917517452506 Protein: TP53 x_train_column_count: 1 x_train columns: ['TP53'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.3443683500812169 Spearman Correlation: 0.28111369193441366 Coefficient of Determination: 0.11858956053765946 RMSE: 0.3978714775463095 NRMSE: 0.10119064003314163 MAPE: 660.7171496107318 Pearson Correlation: 0.3493911871342031 Spearman Correlation: 0.3358321176074515 Coefficient of Determination: 0.10873883694515474 RMSE: 0.4986046379620052 NRMSE: 0.13354885173751313 MAPE: 164.10322763570392 Predictor: ElasticNet Pearson Correlation: 0.3443683500812168 Spearman Correlation: 0.28111369193441366 Coefficient of Determination: 0.11858955990243858 RMSE: 0.3978714776896799 NRMSE: 0.101190640069605 MAPE: 660.6922178787919 Pearson Correlation: 0.3493911871342031 Spearman Correlation: 0.3358321176074515 Coefficient of Determination: 0.10873535302513504 RMSE: 0.4986056124782607 NRMSE: 0.13354911275700032 MAPE: 164.10044023723927 Predictor: RandomForests Pearson Correlation: 0.4315333097262984 Spearman Correlation: 0.34636829091320603 Coefficient of Determination: 0.18530224267891005 RMSE: 0.38251808431714207 NRMSE: 0.09728581202908063 MAPE: 844.9566421003476 Pearson Correlation: 0.43923064667351636 Spearman Correlation: 0.307609706668647 Coefficient of Determination: 0.17124734532602126 RMSE: 0.48080202597385313 NRMSE: 0.12878050782746836 MAPE: 184.65594885123437 Protein: CTNNB1 x_train_column_count: 1 x_train columns: ['CTNNB1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.051827173721756895 Spearman Correlation: 0.07808903558350536 Coefficient of Determination: 0.0026860559359851433 RMSE: 0.754964808220002 NRMSE: 0.1484981920180964 MAPE: 681.5629059451327 Pearson Correlation: 0.16859534211479754 Spearman Correlation: 0.23237945610294397 Coefficient of Determination: 0.01568558602311365 RMSE: 0.6723219959141442 NRMSE: 0.21532287635886105 MAPE: 272.72583953479517 Predictor: ElasticNet Pearson Correlation: 0.0518271737217569 Spearman Correlation: 0.07808903558350536 Coefficient of Determination: 0.0026860559261494554 RMSE: 0.7549648082237248 NRMSE: 0.14849819201882866 MAPE: 681.5642415402232 Pearson Correlation: 0.16859534211479751 Spearman Correlation: 0.23237945610294397 Coefficient of Determination: 0.015684830383019266 RMSE: 0.6723222539787178 NRMSE: 0.21532295900855364 MAPE: 272.72565163939026 Predictor: RandomForests Pearson Correlation: 0.2709132651209278 Spearman Correlation: 0.26370850559812414 Coefficient of Determination: 0.053288494500083106 RMSE: 0.7355625165488577 NRMSE: 0.14468184825902003 MAPE: 720.5866044879414 Pearson Correlation: 0.21966619098758053 Spearman Correlation: 0.2606286481137723 Coefficient of Determination: 0.03927354356881818 RMSE: 0.6642174375171072 NRMSE: 0.212727249804511 MAPE: 272.48748832271815 Protein: CCNE1 x_train_column_count: 1 x_train columns: ['CCNE1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.7385943192541282 Spearman Correlation: 0.7126097756485593 Coefficient of Determination: 0.5455215684344692 RMSE: 0.30255393165396605 NRMSE: 0.10776631581619449 MAPE: 69.03917699123278 Pearson Correlation: 0.7813741840172372 Spearman Correlation: 0.719053853539321 Coefficient of Determination: 0.2513220826076349 RMSE: 0.5607727755966647 NRMSE: 0.13533141289105502 MAPE: 91.41153464276908 Predictor: ElasticNet Pearson Correlation: 0.7385943192541282 Spearman Correlation: 0.7126097756485593 Coefficient of Determination: 0.5455215629505619 RMSE: 0.3025539334793307 NRMSE: 0.10776631646636889 MAPE: 69.04154671607486 Pearson Correlation: 0.7813741840172372 Spearman Correlation: 0.719053853539321 Coefficient of Determination: 0.25148739015219623 RMSE: 0.5607108630665741 NRMSE: 0.1353164715270348 MAPE: 91.41185328625822 Predictor: RandomForests Pearson Correlation: 0.8556441900853572 Spearman Correlation: 0.7114927920105991 Coefficient of Determination: 0.7307222498598404 RMSE: 0.23288761708519015 NRMSE: 0.08295195621912382 MAPE: 56.512948131727114 Pearson Correlation: 0.8005340807679645 Spearman Correlation: 0.7307358786224182 Coefficient of Determination: 0.6136504949478718 RMSE: 0.4028372194679773 NRMSE: 0.09721679162776681 MAPE: 78.43246041847577 Protein: CCND1 x_train_column_count: 1 x_train columns: ['CCND1'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.4145177286037175 Spearman Correlation: 0.42726285187649277 Coefficient of Determination: 0.17182494732678522 RMSE: 0.2071424658065258 NRMSE: 0.13046864973201514 MAPE: 584.9069938579767 Pearson Correlation: 0.358992718576449 Spearman Correlation: 0.2762503273108144 Coefficient of Determination: 0.12633820729729517 RMSE: 0.2579384860996859 NRMSE: 0.1647937581296469 MAPE: 243.89682158790055 Predictor: ElasticNet Pearson Correlation: 0.41451772860371755 Spearman Correlation: 0.42726285187649277 Coefficient of Determination: 0.17182494732119957 RMSE: 0.2071424658072243 NRMSE: 0.1304686497324551 MAPE: 584.9075646099564 Pearson Correlation: 0.358992718576449 Spearman Correlation: 0.2762503273108144 Coefficient of Determination: 0.12633810720855265 RMSE: 0.2579385008747042 NRMSE: 0.16479376756922617 MAPE: 243.89694748261402 Predictor: RandomForests Pearson Correlation: 0.491338635402475 Spearman Correlation: 0.4512173853537595 Coefficient of Determination: 0.23817352746790288 RMSE: 0.19867174193036233 NRMSE: 0.12513336562176405 MAPE: 544.3909708292624 Pearson Correlation: 0.39141166085500984 Spearman Correlation: 0.2942353603372814 Coefficient of Determination: 0.15022210570379357 RMSE: 0.25438833306784453 NRMSE: 0.16252560858399748 MAPE: 251.6905399030386 Protein: ERBB2 x_train_column_count: 1 x_train columns: ['ERBB2'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.7776877249625477 Spearman Correlation: 0.6442627066647334 Coefficient of Determination: 0.6047981975574234 RMSE: 0.6462029190492306 NRMSE: 0.11009130263032703 MAPE: 306.01343460200195 Pearson Correlation: 0.6819514367848012 Spearman Correlation: 0.5872666741480568 Coefficient of Determination: 0.46429713939097983 RMSE: 0.6350994407726499 NRMSE: 0.14052427055485117 MAPE: 204.89012646095057 Predictor: ElasticNet Pearson Correlation: 0.7776877249625477 Spearman Correlation: 0.6442627066647334 Coefficient of Determination: 0.604798197557368 RMSE: 0.6462029190492757 NRMSE: 0.11009130263033473 MAPE: 306.01350741312586 Pearson Correlation: 0.6819514367848012 Spearman Correlation: 0.5872666741480568 Coefficient of Determination: 0.46429715110159864 RMSE: 0.6350994338309215 NRMSE: 0.14052426901890067 MAPE: 204.89019497785407 Predictor: RandomForests Pearson Correlation: 0.838022725420146 Spearman Correlation: 0.6476716327438983 Coefficient of Determination: 0.7007492231903293 RMSE: 0.5623116746672499 NRMSE: 0.09579904844664121 MAPE: 556.9708624977075 Pearson Correlation: 0.7751002688381805 Spearman Correlation: 0.5803322760177033 Coefficient of Determination: 0.5949869104508938 RMSE: 0.552222728245644 NRMSE: 0.12218668619219915 MAPE: 295.855146905497 Protein: ERBB3 x_train_column_count: 1 x_train columns: ['ERBB3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.3773884363248901 Spearman Correlation: 0.41142820549776254 Coefficient of Determination: 0.14242203187174562 RMSE: 0.43423667161575774 NRMSE: 0.11718801437220049 MAPE: 211.57021337384992 Pearson Correlation: 0.5207896565156246 Spearman Correlation: 0.5619845633985462 Coefficient of Determination: 0.23145517366475354 RMSE: 0.3655433086618584 NRMSE: 0.17686096101384646 MAPE: 189.6678786548623 Predictor: ElasticNet Pearson Correlation: 0.3773884363248901 Spearman Correlation: 0.41142820549776254 Coefficient of Determination: 0.1424220318453311 RMSE: 0.43423667162244534 NRMSE: 0.11718801437400528 MAPE: 211.5703984107923 Pearson Correlation: 0.5207896565156245 Spearman Correlation: 0.5619845633985462 Coefficient of Determination: 0.2314532053506414 RMSE: 0.3655437767566056 NRMSE: 0.1768611874923098 MAPE: 189.6681080447603 Predictor: RandomForests Pearson Correlation: 0.46247361973981643 Spearman Correlation: 0.42563267771628494 Coefficient of Determination: 0.21289293377250285 RMSE: 0.41601270604680346 NRMSE: 0.1122698891225144 MAPE: 251.7081601814871 Pearson Correlation: 0.54545299417486 Spearman Correlation: 0.5588239281487987 Coefficient of Determination: 0.26905084709705074 RMSE: 0.3564903845876662 NRMSE: 0.172480881242702 MAPE: 218.39049140103648
self-mRNA with Mutations
ZScore
scenario = Scenario.selfmRNA_Mutations
normalizeTechnique = NormalizeTechnique.ZScore
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.648331 | 0.348611 | 0.770359 | -0.860535 | -0.0703 | -0.190586 | 0.719543 | 0.931178 | -0.283665 | -0.568745 | ... | 0.238689 | -0.239582 | -0.271725 | -0.222943 | -0.211122 | 0.792968 | -0.619672 | -0.946953 | -0.457066 | 0.454464 |
| TCGA-A1-A0SH-01 | -0.757220 | -0.562180 | -0.708360 | -0.860535 | -0.0703 | -0.190586 | -0.527186 | -0.611509 | -0.283665 | -0.568745 | ... | 0.739490 | -0.107967 | -1.200905 | -0.903627 | 1.252346 | 0.854083 | 0.108510 | -0.031025 | 0.991113 | -0.083768 |
| TCGA-A1-A0SJ-01 | -0.405237 | 0.254851 | -0.925065 | -0.223237 | -0.0703 | -0.190586 | -0.525012 | -0.390046 | -0.283665 | 1.475888 | ... | 0.592975 | 5.821247 | -1.079296 | -0.618408 | 0.444358 | -0.369825 | -0.573411 | -0.555512 | -0.488416 | -0.083768 |
| TCGA-A1-A0SK-01 | 3.940101 | 14.857648 | -0.228301 | -0.311392 | -0.0703 | -0.004913 | -0.697917 | -0.754652 | -0.283665 | -0.568745 | ... | 0.051750 | -0.027856 | 2.390553 | 0.357970 | 1.337526 | -1.597758 | 1.043918 | 0.590450 | -0.467061 | -0.083768 |
| TCGA-A1-A0SQ-01 | -1.114818 | -1.129592 | -0.842620 | -0.860535 | -0.0703 | -0.190586 | -0.507239 | -0.137487 | -0.283665 | -0.568745 | ... | 1.412610 | -0.008283 | -0.929428 | -0.853107 | 0.062384 | -0.434733 | -1.040418 | -0.606257 | -0.580936 | -0.083768 |
5 rows × 20133 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 2 x_train columns: ['RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.19527152842778894 Spearman Correlation: 0.2596678142795193 Coefficient of Determination: 0.038130969814524684 RMSE: 0.2197877955294061 NRMSE: 0.08323718823306422 MAPE: 187.6714116374226 Pearson Correlation: 0.2796279815287011 Spearman Correlation: 0.34967808018729885 Coefficient of Determination: 0.021823743704235676 RMSE: 0.2773889570991764 NRMSE: 0.1370343079092674 MAPE: 130.43726751279024 Predictor: ElasticNet Pearson Correlation: 0.19391279737668238 Spearman Correlation: 0.25847504910702246 Coefficient of Determination: 0.03440862321528804 RMSE: 0.2202126643715294 NRMSE: 0.08339809292616147 MAPE: 168.19927789298896 Pearson Correlation: 0.2796279815287011 Spearman Correlation: 0.34967808018729885 Coefficient of Determination: 0.009490532346382974 RMSE: 0.27913219122970495 NRMSE: 0.13789549173251306 MAPE: 128.79234861797073 Predictor: RandomForests Pearson Correlation: 0.3383152856508986 Spearman Correlation: 0.3393842592916632 Coefficient of Determination: 0.09803238411505888 RMSE: 0.21283403305296428 NRMSE: 0.08060368606436821 MAPE: 145.4194861494385 Pearson Correlation: 0.27052230404535893 Spearman Correlation: 0.3280678885109722 Coefficient of Determination: 0.025909129675039777 RMSE: 0.27680908886038547 NRMSE: 0.13674784429654013 MAPE: 107.55264771623115 Protein: CDH1 x_train_column_count: 2 x_train columns: ['CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 0.6279558973899952 Spearman Correlation: 0.5626465965121538 Coefficient of Determination: 0.39432860906687417 RMSE: 0.8782006040980864 NRMSE: 0.14761410655002882 MAPE: 484.0992717600399 Pearson Correlation: 0.6734443624132094 Spearman Correlation: 0.6512632913862063 Coefficient of Determination: 0.452747536657401 RMSE: 0.8583534228745238 NRMSE: 0.13902261392156454 MAPE: 259.40861656444446 Predictor: ElasticNet Pearson Correlation: 0.6069842830722024 Spearman Correlation: 0.5650094990355278 Coefficient of Determination: 0.35477885808439924 RMSE: 0.9064200346078275 NRMSE: 0.15235742601782185 MAPE: 558.4710298070262 Pearson Correlation: 0.6366760760713828 Spearman Correlation: 0.6512632913862063 Coefficient of Determination: 0.3991842462695784 RMSE: 0.8993794012226365 NRMSE: 0.14566735791238322 MAPE: 304.9675184671115 Predictor: RandomForests Pearson Correlation: 0.7167132530882677 Spearman Correlation: 0.5788660777443754 Coefficient of Determination: 0.5131766821713584 RMSE: 0.787337410243528 NRMSE: 0.1323411847181228 MAPE: 307.9025522067983 Pearson Correlation: 0.7415010523499842 Spearman Correlation: 0.6553520846612731 Coefficient of Determination: 0.5467665669927284 RMSE: 0.781147864684134 NRMSE: 0.12651806949631272 MAPE: 152.89909095904093 Protein: CDH2 x_train_column_count: 2 x_train columns: ['CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.15002477351668805 Spearman Correlation: 0.021027718948557195 Coefficient of Determination: 0.02250743266873345 RMSE: 0.366993371962299 NRMSE: 0.1355784991382294 MAPE: 373.67876553512673 Pearson Correlation: 0.10564670001853974 Spearman Correlation: 0.11871524729294705 Coefficient of Determination: 0.008640461878668515 RMSE: 0.3734908911193236 NRMSE: 0.19274959545818424 MAPE: 104.18723456874639 Predictor: ElasticNet Pearson Correlation: 0.15002477351668805 Spearman Correlation: 0.021027718948557195 Coefficient of Determination: 0.021389823238000316 RMSE: 0.367203111707208 NRMSE: 0.13565598337090737 MAPE: 391.79335613369665 Pearson Correlation: 0.10564670001853971 Spearman Correlation: 0.11871524729294705 Coefficient of Determination: 0.007373318183814814 RMSE: 0.3737295106489882 NRMSE: 0.192872741213288 MAPE: 104.42104625430859 Predictor: RandomForests Pearson Correlation: 0.19331701961991646 Spearman Correlation: 0.1288920303560814 Coefficient of Determination: 0.03662847645748135 RMSE: 0.36433290051662137 NRMSE: 0.1345956401735663 MAPE: 517.4362375376886 Pearson Correlation: 0.044230558158288136 Spearman Correlation: -0.05978684567685635 Coefficient of Determination: -0.006409334490806495 RMSE: 0.3763151890353155 NRMSE: 0.19420714715142465 MAPE: 98.36754929438122 Protein: CDH3 x_train_column_count: 2 x_train columns: ['CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.24852272791737332 Spearman Correlation: 0.30478529422494005 Coefficient of Determination: 0.06176354629149272 RMSE: 0.20224890215241426 NRMSE: 0.14189320743700837 MAPE: 292.3945463226748 Pearson Correlation: 0.4229275133140767 Spearman Correlation: 0.4640717978733782 Coefficient of Determination: 0.16215276852659732 RMSE: 0.18725963044582647 NRMSE: 0.14332812641757542 MAPE: 197.9811113353206 Predictor: ElasticNet Pearson Correlation: 0.24821600086503437 Spearman Correlation: 0.3061115403229242 Coefficient of Determination: 0.05692412031486016 RMSE: 0.20276983144950572 NRMSE: 0.14225867952622898 MAPE: 234.80439124339486 Pearson Correlation: 0.4229275133140768 Spearman Correlation: 0.4640717978733782 Coefficient of Determination: 0.1374548654963682 RMSE: 0.18999958718841511 NRMSE: 0.14542528353278208 MAPE: 167.23048620676332 Predictor: RandomForests Pearson Correlation: 0.3496682668189332 Spearman Correlation: 0.3307097672586625 Coefficient of Determination: 0.12015906260707776 RMSE: 0.19585384588255172 NRMSE: 0.13740658211437934 MAPE: 381.1612404025097 Pearson Correlation: 0.4456557812474688 Spearman Correlation: 0.4605862331967038 Coefficient of Determination: 0.17847992914693533 RMSE: 0.1854260861696705 NRMSE: 0.14192473549354423 MAPE: 326.56281030401266 Protein: PTEN x_train_column_count: 2 x_train columns: ['PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 0.4188791034352885 Spearman Correlation: 0.44078066604527977 Coefficient of Determination: 0.17545970329475102 RMSE: 0.5688648238965365 NRMSE: 0.08894767006434781 MAPE: 396.80264759862143 Pearson Correlation: 0.35731102299960693 Spearman Correlation: 0.4041020388254805 Coefficient of Determination: 0.11499556078292605 RMSE: 0.4672372428875627 NRMSE: 0.1539902586802329 MAPE: 165.92352360717715 Predictor: ElasticNet Pearson Correlation: 0.40816020357582666 Spearman Correlation: 0.4346647998197213 Coefficient of Determination: 0.16390226799451857 RMSE: 0.5728377889973648 NRMSE: 0.08956888265145255 MAPE: 370.1870856697114 Pearson Correlation: 0.3793366579039916 Spearman Correlation: 0.4074919520046825 Coefficient of Determination: 0.14281574062561142 RMSE: 0.4598347855805094 NRMSE: 0.151550585189015 MAPE: 154.10751092441913 Predictor: RandomForests Pearson Correlation: 0.45236902822468755 Spearman Correlation: 0.4487524954963713 Coefficient of Determination: 0.20039971076781782 RMSE: 0.5601954903785883 NRMSE: 0.08759213359058529 MAPE: 516.2173301723134 Pearson Correlation: 0.38441368455050445 Spearman Correlation: 0.39593710625776624 Coefficient of Determination: 0.13716782199510313 RMSE: 0.46134720570689036 NRMSE: 0.15204904281421472 MAPE: 200.88083641732086 Protein: BRCA2 x_train_column_count: 2 x_train columns: ['BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.00842802231569148 Spearman Correlation: -0.005159182575289313 Coefficient of Determination: 7.103156015364487e-05 RMSE: 0.19760420841075446 NRMSE: 0.12782801056418722 MAPE: 122.20696074669006 Pearson Correlation: -0.07297127632150083 Spearman Correlation: -0.08797201245252427 Coefficient of Determination: -0.0064731867761484985 RMSE: 0.1853316133792551 NRMSE: 0.18547999737715687 MAPE: 103.9139384990902 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: RandomForests Pearson Correlation: 0.3264054509821304 Spearman Correlation: 0.25514821736101123 Coefficient of Determination: 0.04915822129348457 RMSE: 0.19269291308570505 NRMSE: 0.1246509471010991 MAPE: 134.13410266570628 Pearson Correlation: -0.04146970603920158 Spearman Correlation: -0.016131654893247544 Coefficient of Determination: -0.022246853818178813 RMSE: 0.18677824613802824 NRMSE: 0.18692778836872323 MAPE: 115.02861537614206 Protein: CDKN2A x_train_column_count: 2 x_train columns: ['CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 0.4802999068423231 Spearman Correlation: 0.48708475403799584 Coefficient of Determination: 0.23068800051274407 RMSE: 0.5637278766322544 NRMSE: 0.12743933008528413 MAPE: 152.22189466183914 Pearson Correlation: 0.5965712816312629 Spearman Correlation: 0.5412203687445128 Coefficient of Determination: 0.35132796117392295 RMSE: 0.6015263279382246 NRMSE: 0.16244297270813518 MAPE: 148.06735276797684 Predictor: ElasticNet Pearson Correlation: 0.48027814349293335 Spearman Correlation: 0.4872043250292133 Coefficient of Determination: 0.22704936806702125 RMSE: 0.5650594422796019 NRMSE: 0.1277403509166049 MAPE: 159.97743505692895 Pearson Correlation: 0.5965712816312629 Spearman Correlation: 0.5412203687445128 Coefficient of Determination: 0.3387199150903565 RMSE: 0.6073440391427579 NRMSE: 0.16401405323866 MAPE: 181.68431518226043 Predictor: RandomForests Pearson Correlation: 0.6031166548470466 Spearman Correlation: 0.5142043852276713 Coefficient of Determination: 0.36338257195258583 RMSE: 0.5128112215701984 NRMSE: 0.11592883950948307 MAPE: 222.42155552398435 Pearson Correlation: 0.6736173012257093 Spearman Correlation: 0.5183481629817652 Coefficient of Determination: 0.4416816519711879 RMSE: 0.5580627074004604 NRMSE: 0.15070556505548485 MAPE: 518.4052407636528 Protein: TP53 x_train_column_count: 2 x_train columns: ['TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.48936689486328205 Spearman Correlation: 0.38957054234181804 Coefficient of Determination: 0.23947995778813047 RMSE: 0.3948939862283756 NRMSE: 0.09490362562566106 MAPE: 795.0838550971353 Pearson Correlation: 0.5034551498329739 Spearman Correlation: 0.4709930738464541 Coefficient of Determination: 0.24730289040861464 RMSE: 0.3649372558854645 NRMSE: 0.13122990970026413 MAPE: 596.0863107159812 Predictor: ElasticNet Pearson Correlation: 0.48345161147504073 Spearman Correlation: 0.3861884578695623 Coefficient of Determination: 0.2206009512006616 RMSE: 0.39976532728239716 NRMSE: 0.09607433964969891 MAPE: 661.4350059160336 Pearson Correlation: 0.47544249457337523 Spearman Correlation: 0.43511852502194914 Coefficient of Determination: 0.22495404613366266 RMSE: 0.3703154268957782 NRMSE: 0.13316387748418793 MAPE: 536.3180993736294 Predictor: RandomForests Pearson Correlation: 0.5510002233027409 Spearman Correlation: 0.4233688188011204 Coefficient of Determination: 0.2954069900795824 RMSE: 0.3800969225428784 NRMSE: 0.09134749400213373 MAPE: 699.0310629901686 Pearson Correlation: 0.5124254978006286 Spearman Correlation: 0.5046523359322292 Coefficient of Determination: 0.2612377223025778 RMSE: 0.36154339655957785 NRMSE: 0.13000949209233625 MAPE: 378.7330812455238 Protein: CTNNB1 x_train_column_count: 2 x_train columns: ['CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 0.08898105342822928 Spearman Correlation: 0.14590811000321963 Coefficient of Determination: 0.007917627869197141 RMSE: 0.7343107892164393 NRMSE: 0.1479958057150653 MAPE: 635.7829662685036 Pearson Correlation: -0.002401946823815699 Spearman Correlation: -0.034040581406692035 Coefficient of Determination: -0.022319441458223288 RMSE: 0.7592919987705886 NRMSE: 0.1883818783234726 MAPE: 284.0557468282036 Predictor: ElasticNet Pearson Correlation: 0.08898105342822929 Spearman Correlation: 0.14590811000321963 Coefficient of Determination: 0.007545582007248086 RMSE: 0.7344484651240611 NRMSE: 0.14802355344419477 MAPE: 641.8973917786813 Pearson Correlation: -0.002401946823815745 Spearman Correlation: -0.034040581406692035 Coefficient of Determination: -0.020061602593201 RMSE: 0.7584530698987669 NRMSE: 0.18817373837611448 MAPE: 293.1436637677291 Predictor: RandomForests Pearson Correlation: 0.3101921197195444 Spearman Correlation: 0.30218639412689285 Coefficient of Determination: 0.08112196149899753 RMSE: 0.7066998169279368 NRMSE: 0.14243098472860852 MAPE: 629.3479296651823 Pearson Correlation: -0.06030718098076416 Spearman Correlation: -0.04014575748895606 Coefficient of Determination: -0.07580801753149946 RMSE: 0.7789021484733238 NRMSE: 0.19324719606840765 MAPE: 401.6201927378137 Protein: CCNE1 x_train_column_count: 2 x_train columns: ['CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.7219448352970321 Spearman Correlation: 0.7137588590927915 Coefficient of Determination: 0.5212043452120588 RMSE: 0.33467655726409257 NRMSE: 0.0807675645592327 MAPE: 91.9557432422028 Pearson Correlation: 0.7713064884061223 Spearman Correlation: 0.7106623744024974 Coefficient of Determination: 0.5218328477320503 RMSE: 0.3713611938248207 NRMSE: 0.13227469058764763 MAPE: 54.38453894319899 Predictor: ElasticNet Pearson Correlation: 0.7219395993512734 Spearman Correlation: 0.7131090453751777 Coefficient of Determination: 0.5157710926309755 RMSE: 0.33657011318703295 NRMSE: 0.08122453681179452 MAPE: 94.36234957422688 Pearson Correlation: 0.7713064884061223 Spearman Correlation: 0.7106623744024974 Coefficient of Determination: 0.49145500297987377 RMSE: 0.3829758095538306 NRMSE: 0.13641168639495302 MAPE: 57.325425996766754 Predictor: RandomForests Pearson Correlation: 0.8562861508639215 Spearman Correlation: 0.7204360697849619 Coefficient of Determination: 0.7279163800285591 RMSE: 0.25229078682087813 NRMSE: 0.06088538910173954 MAPE: 54.30365639848357 Pearson Correlation: 0.8350602153703399 Spearman Correlation: 0.7068832036023305 Coefficient of Determination: 0.6949121277125943 RMSE: 0.29663276628948443 NRMSE: 0.10565726314852517 MAPE: 44.991407020009255 Protein: CCND1 x_train_column_count: 2 x_train columns: ['CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 0.40406808750248174 Spearman Correlation: 0.37768748734328855 Coefficient of Determination: 0.1632710193379131 RMSE: 0.21852325442478654 NRMSE: 0.13136986114438118 MAPE: 345.99314721459893 Pearson Correlation: 0.4722252539569458 Spearman Correlation: 0.4734221051604722 Coefficient of Determination: 0.08399776282780602 RMSE: 0.2248633945698195 NRMSE: 0.16014998758604887 MAPE: 1093.634695043635 Predictor: ElasticNet Pearson Correlation: 0.4014769912379663 Spearman Correlation: 0.3731637827526827 Coefficient of Determination: 0.15146289068647056 RMSE: 0.22005977986956152 NRMSE: 0.13229357580740975 MAPE: 361.16176170458004 Pearson Correlation: 0.47222525395694587 Spearman Correlation: 0.4734221051604722 Coefficient of Determination: 0.19487131632624488 RMSE: 0.2108157942505513 NRMSE: 0.15014514432977558 MAPE: 1150.8807789665116 Predictor: RandomForests Pearson Correlation: 0.4678371375434505 Spearman Correlation: 0.4000144577763212 Coefficient of Determination: 0.21263881710072907 RMSE: 0.21197871451568037 NRMSE: 0.12743547301083333 MAPE: 313.8994682707794 Pearson Correlation: 0.5051577497307473 Spearman Correlation: 0.4767786498993165 Coefficient of Determination: 0.2533320194705554 RMSE: 0.20301786639906733 NRMSE: 0.14459138111722075 MAPE: 1138.045040698996 Protein: ERBB2 x_train_column_count: 2 x_train columns: ['ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 0.7659173929830421 Spearman Correlation: 0.6116397286443633 Coefficient of Determination: 0.5866294528739393 RMSE: 0.6552429682383681 NRMSE: 0.11163142379310155 MAPE: 324.5804019832865 Pearson Correlation: 0.7602365413428478 Spearman Correlation: 0.7022827041264268 Coefficient of Determination: 0.5613254676670083 RMSE: 0.60075567631983 NRMSE: 0.11139545268307621 MAPE: 284.3036808748742 Predictor: ElasticNet Pearson Correlation: 0.7657610435301816 Spearman Correlation: 0.6137508967340191 Coefficient of Determination: 0.5818619497632238 RMSE: 0.6590106742149663 NRMSE: 0.11227331451606834 MAPE: 343.49496156824915 Pearson Correlation: 0.7627625013199513 Spearman Correlation: 0.7166081357916302 Coefficient of Determination: 0.5491181726547959 RMSE: 0.6090571386965504 NRMSE: 0.11293475592370673 MAPE: 300.4058784707829 Predictor: RandomForests Pearson Correlation: 0.8350447059162798 Spearman Correlation: 0.6216515632506531 Coefficient of Determination: 0.6965509892505153 RMSE: 0.5614039541274837 NRMSE: 0.09564440331319891 MAPE: 467.4276979149923 Pearson Correlation: 0.8040149199599619 Spearman Correlation: 0.712575091635544 Coefficient of Determination: 0.6363330370305993 RMSE: 0.5469890053467115 NRMSE: 0.1014257380579847 MAPE: 341.9689748270015 Protein: ERBB3 x_train_column_count: 2 x_train columns: ['ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.40624826413738435 Spearman Correlation: 0.4427133471412132 Coefficient of Determination: 0.16503765211463794 RMSE: 0.41954331383050747 NRMSE: 0.11322269882916539 MAPE: 202.28699368456597 Pearson Correlation: 0.4086291987816516 Spearman Correlation: 0.45536588548210316 Coefficient of Determination: 0.1635740509453626 RMSE: 0.4257466448571584 NRMSE: 0.17083439460434258 MAPE: 197.9044682075449 Predictor: ElasticNet Pearson Correlation: 0.40021079138717147 Spearman Correlation: 0.4461608353851102 Coefficient of Determination: 0.15730711184815838 RMSE: 0.4214810203548932 NRMSE: 0.1137456302047765 MAPE: 197.2877243317092 Pearson Correlation: 0.4241326159508129 Spearman Correlation: 0.47324952839944506 Coefficient of Determination: 0.1705193093701054 RMSE: 0.4239753677429299 NRMSE: 0.17012365487887207 MAPE: 194.35349477791942 Predictor: RandomForests Pearson Correlation: 0.488999182581015 Spearman Correlation: 0.4625532488300241 Coefficient of Determination: 0.23752045294377655 RMSE: 0.40091975626486726 NRMSE: 0.10819673516851229 MAPE: 242.43941073526028 Pearson Correlation: 0.43051383879067884 Spearman Correlation: 0.4715525332197415 Coefficient of Determination: 0.17662898932460092 RMSE: 0.42241105081251895 NRMSE: 0.16949595965448402 MAPE: 271.39177387721145 Fold: 2 Protein: RB1 x_train_column_count: 2 x_train columns: ['RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.2511572694075361 Spearman Correlation: 0.31907158047894724 Coefficient of Determination: 0.06307997397624987 RMSE: 0.22750719811233844 NRMSE: 0.08320187174968492 MAPE: 201.25627265479457 Pearson Correlation: 0.048393478109142726 Spearman Correlation: 0.10395083406496927 Coefficient of Determination: -0.051405406886394944 RMSE: 0.25111985237096757 NRMSE: 0.14387359625245932 MAPE: 325.89365584090115 Predictor: ElasticNet Pearson Correlation: 0.24789230471088963 Spearman Correlation: 0.3159366197816136 Coefficient of Determination: 0.05796256313582204 RMSE: 0.22812766855296912 NRMSE: 0.08342878457905542 MAPE: 167.92284614639414 Pearson Correlation: 0.05322314385144897 Spearman Correlation: 0.10746268656716418 Coefficient of Determination: -0.029735012666590288 RMSE: 0.2485184774280922 NRMSE: 0.14238319569392593 MAPE: 247.67184036074377 Predictor: RandomForests Pearson Correlation: 0.3561481274847229 Spearman Correlation: 0.4067656823580468 Coefficient of Determination: 0.11704931686327302 RMSE: 0.22085747588364613 NRMSE: 0.08076999556891681 MAPE: 212.91843709848627 Pearson Correlation: 0.11218713523215126 Spearman Correlation: 0.13196685330144695 Coefficient of Determination: -0.018378086466819266 RMSE: 0.24714422519366094 NRMSE: 0.14159584810169526 MAPE: 371.2808731876731 Protein: CDH1 x_train_column_count: 2 x_train columns: ['CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.6315052198313875 Spearman Correlation: 0.5446486441750252 Coefficient of Determination: 0.3987988426742891 RMSE: 0.8688793749984193 NRMSE: 0.13938868613113328 MAPE: 415.31916013911666 Pearson Correlation: 0.6431590335933615 Spearman Correlation: 0.6870841869085944 Coefficient of Determination: 0.38536419609566064 RMSE: 0.9020711996260493 NRMSE: 0.16019733610833764 MAPE: 254.18308591244062 Predictor: ElasticNet Pearson Correlation: 0.6042148871675715 Spearman Correlation: 0.5457144765673408 Coefficient of Determination: 0.34953087479277833 RMSE: 0.9037804194318271 NRMSE: 0.1449876344640775 MAPE: 514.6731617453066 Pearson Correlation: 0.6596710014235357 Spearman Correlation: 0.6870841869085944 Coefficient of Determination: 0.3742646630613016 RMSE: 0.9101798788569672 NRMSE: 0.16163734307529162 MAPE: 230.9206348645511 Predictor: RandomForests Pearson Correlation: 0.7366071809739936 Spearman Correlation: 0.5636673055499254 Coefficient of Determination: 0.5422574030959135 RMSE: 0.7581589198918414 NRMSE: 0.12162652119865908 MAPE: 214.97063545629814 Pearson Correlation: 0.6551607825586359 Spearman Correlation: 0.7008146074293089 Coefficient of Determination: 0.39105486201687945 RMSE: 0.8978855313682372 NRMSE: 0.1594540101879306 MAPE: 214.84821008509215 Protein: CDH2 x_train_column_count: 2 x_train columns: ['CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.1470397616820179 Spearman Correlation: 0.035212766431470366 Coefficient of Determination: 0.02162069151550461 RMSE: 0.3640972720820029 NRMSE: 0.1319288615414171 MAPE: 381.4769124837087 Pearson Correlation: 0.11717867760285976 Spearman Correlation: 0.063681592039801 Coefficient of Determination: 0.012875471236388325 RMSE: 0.3845803830082546 NRMSE: 0.2026058693416578 MAPE: 121.62788852850377 Predictor: ElasticNet Pearson Correlation: 0.14703137875818367 Spearman Correlation: 0.03346468965108404 Coefficient of Determination: 0.02042216840236355 RMSE: 0.364320214979518 NRMSE: 0.13200964380734764 MAPE: 398.60075060181646 Pearson Correlation: 0.11717867760285976 Spearman Correlation: 0.063681592039801 Coefficient of Determination: 0.011366622098089696 RMSE: 0.38487419204171014 NRMSE: 0.20276065475785107 MAPE: 124.75803606638401 Predictor: RandomForests Pearson Correlation: 0.19455280933418412 Spearman Correlation: 0.14521011138581139 Coefficient of Determination: 0.03651059964118086 RMSE: 0.3613160602024537 NRMSE: 0.13092110305183483 MAPE: 424.3360219113005 Pearson Correlation: 0.11830349762100852 Spearman Correlation: 0.0855059428777579 Coefficient of Determination: 0.010769358098726367 RMSE: 0.3849904316896376 NRMSE: 0.20282189250153443 MAPE: 124.97634642871276 Protein: CDH3 x_train_column_count: 2 x_train columns: ['CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.33039940395723194 Spearman Correlation: 0.3546567496876568 Coefficient of Determination: 0.10916376613529433 RMSE: 0.1960421497425445 NRMSE: 0.14754099760112624 MAPE: 270.9861508027027 Pearson Correlation: 0.10870762980468017 Spearman Correlation: 0.25441908106526195 Coefficient of Determination: -0.18081292145862626 RMSE: 0.21507834130770143 NRMSE: 0.17697551329523695 MAPE: 625.0033719921506 Predictor: ElasticNet Pearson Correlation: 0.3303764572390311 Spearman Correlation: 0.3550272027884919 Coefficient of Determination: 0.10444287039367006 RMSE: 0.19656091604995224 NRMSE: 0.14793142026593228 MAPE: 229.42282633795702 Pearson Correlation: 0.10770672491069783 Spearman Correlation: 0.25419471271095506 Coefficient of Determination: -0.15988982330622492 RMSE: 0.21316431311611922 NRMSE: 0.17540057032512074 MAPE: 536.5420737186791 Predictor: RandomForests Pearson Correlation: 0.4204408504993642 Spearman Correlation: 0.38155013256774595 Coefficient of Determination: 0.17584235816615323 RMSE: 0.18856264633511197 NRMSE: 0.14191193570937055 MAPE: 407.97875051638437 Pearson Correlation: 0.15295236629097841 Spearman Correlation: 0.25482125674289846 Coefficient of Determination: -0.20407823566708516 RMSE: 0.21718682836391678 NRMSE: 0.17871046520523065 MAPE: 749.9682708776052 Protein: PTEN x_train_column_count: 2 x_train columns: ['PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.4241690656326126 Spearman Correlation: 0.45794433369899473 Coefficient of Determination: 0.1799193962396437 RMSE: 0.5648570650041206 NRMSE: 0.08832101712205778 MAPE: 328.3921540425162 Pearson Correlation: 0.38024655569171983 Spearman Correlation: 0.34407374890254616 Coefficient of Determination: 0.08593951642891173 RMSE: 0.48915174743554635 NRMSE: 0.16405679750320176 MAPE: 643.5112425804167 Predictor: ElasticNet Pearson Correlation: 0.4150879520954388 Spearman Correlation: 0.4532447986232365 Coefficient of Determination: 0.16943637072313578 RMSE: 0.5684558623392141 NRMSE: 0.08888372485954406 MAPE: 298.1225952007116 Pearson Correlation: 0.3664138923106717 Spearman Correlation: 0.3264169349331773 Coefficient of Determination: 0.11242219619513705 RMSE: 0.48201367414664453 NRMSE: 0.1616627562874445 MAPE: 575.1862002914136 Predictor: RandomForests Pearson Correlation: 0.466726010178586 Spearman Correlation: 0.4753913774615105 Coefficient of Determination: 0.21373240225643642 RMSE: 0.5530895898238344 NRMSE: 0.08648105540205368 MAPE: 368.0070173577029 Pearson Correlation: 0.3314358838524452 Spearman Correlation: 0.3269356128219667 Coefficient of Determination: 0.06792532786637973 RMSE: 0.4939483007008637 NRMSE: 0.1656655153947088 MAPE: 785.4197352552937 Protein: BRCA2 x_train_column_count: 2 x_train columns: ['BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.042436828068699334 Spearman Correlation: 0.06477237688313686 Coefficient of Determination: 0.0018008843765322524 RMSE: 0.19514843785952132 NRMSE: 0.12571972160381467 MAPE: 117.1461312853148 Pearson Correlation: -0.08928340042852545 Spearman Correlation: -0.1638669398107502 Coefficient of Determination: -0.02766272476565801 RMSE: 0.19584157678029548 NRMSE: 0.1325645433182129 MAPE: 118.46378786857773 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: RandomForests Pearson Correlation: 0.3077670968857318 Spearman Correlation: 0.2559471197183224 Coefficient of Determination: 0.04418964240867662 RMSE: 0.19095997756970787 NRMSE: 0.12302140606842189 MAPE: 126.66158716885236 Pearson Correlation: 0.07485828109476582 Spearman Correlation: 0.04821987727977225 Coefficient of Determination: -0.011707684095326076 RMSE: 0.19431535453633306 NRMSE: 0.13153144831306007 MAPE: 123.3513058769194 Protein: CDKN2A x_train_column_count: 2 x_train columns: ['CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.5040657731519571 Spearman Correlation: 0.47627697631549 Coefficient of Determination: 0.25408230366328044 RMSE: 0.5729080406613378 NRMSE: 0.1295146469224229 MAPE: 150.58184480641242 Pearson Correlation: 0.5570318023649256 Spearman Correlation: 0.57380255584821 Coefficient of Determination: 0.28957905519661165 RMSE: 0.567612340337855 NRMSE: 0.15334243039168333 MAPE: 174.70588681647797 Predictor: ElasticNet Pearson Correlation: 0.5036612591893176 Spearman Correlation: 0.4759909513511134 Coefficient of Determination: 0.2508912599037243 RMSE: 0.5741321861471319 NRMSE: 0.12979138377916397 MAPE: 177.02278482076855 Pearson Correlation: 0.562783406547642 Spearman Correlation: 0.5756072578285046 Coefficient of Determination: 0.2780404114878976 RMSE: 0.5722033481701979 NRMSE: 0.15458270698352009 MAPE: 179.71328964800034 Predictor: RandomForests Pearson Correlation: 0.6040027516191304 Spearman Correlation: 0.4861296560239233 Coefficient of Determination: 0.36433447381499207 RMSE: 0.528875917565927 NRMSE: 0.11956051035739278 MAPE: 257.31980271784846 Pearson Correlation: 0.6768078158008014 Spearman Correlation: 0.569489990183919 Coefficient of Determination: 0.44303391666723235 RMSE: 0.5025836141073503 NRMSE: 0.13577469583621957 MAPE: 209.43106914074932 Protein: TP53 x_train_column_count: 2 x_train columns: ['TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 0.48818016483087484 Spearman Correlation: 0.4181118202259834 Coefficient of Determination: 0.23831987333430005 RMSE: 0.397379306635346 NRMSE: 0.10643613409276712 MAPE: 384.484307688014 Pearson Correlation: 0.5142418553541327 Spearman Correlation: 0.4044385913569408 Coefficient of Determination: 0.2573818514375176 RMSE: 0.3527874266078587 NRMSE: 0.11618225806285483 MAPE: 2233.0782832262653 Predictor: ElasticNet Pearson Correlation: 0.4829952150209345 Spearman Correlation: 0.4143119347173385 Coefficient of Determination: 0.21816734518601033 RMSE: 0.4026019168481501 NRMSE: 0.10783498509391995 MAPE: 331.807695412146 Pearson Correlation: 0.518206590519776 Spearman Correlation: 0.3925958443078724 Coefficient of Determination: 0.25631324928129384 RMSE: 0.35304115989209034 NRMSE: 0.11626581916419902 MAPE: 1814.4492550041505 Predictor: RandomForests Pearson Correlation: 0.5587867995287471 Spearman Correlation: 0.47391112149106396 Coefficient of Determination: 0.30699916357554946 RMSE: 0.37904067333120844 NRMSE: 0.1015242194539195 MAPE: 422.75711316796185 Pearson Correlation: 0.5299315765738543 Spearman Correlation: 0.3714748445602258 Coefficient of Determination: 0.27289143154574313 RMSE: 0.349084005370456 NRMSE: 0.11496262320779053 MAPE: 2141.8730565291485 Protein: CTNNB1 x_train_column_count: 2 x_train columns: ['CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.06653317476644438 Spearman Correlation: 0.1176880432626928 Coefficient of Determination: 0.004426663344502146 RMSE: 0.7233771779417462 NRMSE: 0.1422850468020744 MAPE: 606.7838742154084 Pearson Correlation: 0.1395612017656474 Spearman Correlation: 0.1409813676714467 Coefficient of Determination: -0.1109302986244769 RMSE: 0.8079322447309538 NRMSE: 0.2010732049304283 MAPE: 216.7631314378979 Predictor: ElasticNet Pearson Correlation: 0.06641728094381413 Spearman Correlation: 0.11831189699055593 Coefficient of Determination: 0.003988830124550979 RMSE: 0.7235362238570153 NRMSE: 0.14231633042034134 MAPE: 613.4813598376205 Pearson Correlation: 0.13956120176564735 Spearman Correlation: 0.1409813676714467 Coefficient of Determination: -0.11092527005545061 RMSE: 0.8079304161969478 NRMSE: 0.20107274985613796 MAPE: 236.04303747097165 Predictor: RandomForests Pearson Correlation: 0.2846108698980282 Spearman Correlation: 0.29112484755208995 Coefficient of Determination: 0.06903793114490742 RMSE: 0.6995103870594284 NRMSE: 0.13759055606991116 MAPE: 631.5545292503399 Pearson Correlation: 0.0711397534338752 Spearman Correlation: 0.14282184909213674 Coefficient of Determination: -0.1285956971281863 RMSE: 0.8143305550615784 NRMSE: 0.20266557702933685 MAPE: 489.1762361982494 Protein: CCNE1 x_train_column_count: 2 x_train columns: ['CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.7299247116090841 Spearman Correlation: 0.7061567494715154 Coefficient of Determination: 0.5327900846176046 RMSE: 0.35051079946653413 NRMSE: 0.08458884558885396 MAPE: 90.83614166716927 Pearson Correlation: 0.7770270702564803 Spearman Correlation: 0.7531411569602966 Coefficient of Determination: 0.46747886325152765 RMSE: 0.30523096808283556 NRMSE: 0.16588729725859142 MAPE: 56.09620217722179 Predictor: ElasticNet Pearson Correlation: 0.729924711609084 Spearman Correlation: 0.7061567494715154 Coefficient of Determination: 0.528139638060198 RMSE: 0.35225091194684366 NRMSE: 0.08500878730285583 MAPE: 93.152131284349 Pearson Correlation: 0.7770270702564801 Spearman Correlation: 0.7531411569602966 Coefficient of Determination: 0.439129355192716 RMSE: 0.31325032050888396 NRMSE: 0.17024566465517965 MAPE: 58.0497980645578 Predictor: RandomForests Pearson Correlation: 0.8577101219397514 Spearman Correlation: 0.7101695638315398 Coefficient of Determination: 0.7317659742467798 RMSE: 0.26558424714779255 NRMSE: 0.06409350270236565 MAPE: 67.88985778990819 Pearson Correlation: 0.8351430823920907 Spearman Correlation: 0.7370836679134409 Coefficient of Determination: 0.6941548923260417 RMSE: 0.2313188038212206 NRMSE: 0.12571742445405715 MAPE: 40.56267191069466 Protein: CCND1 x_train_column_count: 2 x_train columns: ['CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.4247267168184558 Spearman Correlation: 0.39900607291610307 Coefficient of Determination: 0.18039278397938474 RMSE: 0.2161401081741948 NRMSE: 0.1299371825360972 MAPE: 532.8984814701605 Pearson Correlation: 0.2969521452872802 Spearman Correlation: 0.3886206223783046 Coefficient of Determination: 0.08399442139906799 RMSE: 0.22532540558367184 NRMSE: 0.17432490993352096 MAPE: 348.83669163077076 Predictor: ElasticNet Pearson Correlation: 0.42236027416892147 Spearman Correlation: 0.3945270040292828 Coefficient of Determination: 0.17376665667810776 RMSE: 0.21701204346327752 NRMSE: 0.13046136481662932 MAPE: 549.658733909338 Pearson Correlation: 0.2969521452872802 Spearman Correlation: 0.3886206223783046 Coefficient of Determination: 0.08177048830311717 RMSE: 0.22559876900624823 NRMSE: 0.17453639986248085 MAPE: 360.735372666207 Predictor: RandomForests Pearson Correlation: 0.5009246505960984 Spearman Correlation: 0.40965593127045014 Coefficient of Determination: 0.2468749440121255 RMSE: 0.20718868121322256 NRMSE: 0.12455584351109315 MAPE: 491.2395482507021 Pearson Correlation: 0.3225095409332167 Spearman Correlation: 0.3839087800361473 Coefficient of Determination: 0.09369217172592081 RMSE: 0.22412947187967547 NRMSE: 0.17339966568644818 MAPE: 339.8668172258049 Protein: ERBB2 x_train_column_count: 2 x_train columns: ['ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.7537853148032354 Spearman Correlation: 0.6558063061456499 Coefficient of Determination: 0.5681923008130128 RMSE: 0.6459554448974096 NRMSE: 0.1159225893970909 MAPE: 208.28281864620325 Pearson Correlation: 0.8100039494045673 Spearman Correlation: 0.500599941469125 Coefficient of Determination: 0.6330601276325525 RMSE: 0.6404058113084755 NRMSE: 0.10910366991643108 MAPE: 800.5737067111246 Predictor: ElasticNet Pearson Correlation: 0.7536423359707011 Spearman Correlation: 0.6630955260861322 Coefficient of Determination: 0.5626654402648787 RMSE: 0.6500762079549097 NRMSE: 0.11666209786890686 MAPE: 226.38026907451376 Pearson Correlation: 0.810849841678388 Spearman Correlation: 0.5166032582187103 Coefficient of Determination: 0.6194144024898142 RMSE: 0.6522047930138986 NRMSE: 0.1111138206405606 MAPE: 858.337557835572 Predictor: RandomForests Pearson Correlation: 0.8389294424186139 Spearman Correlation: 0.6674393366047144 Coefficient of Determination: 0.7023030045025691 RMSE: 0.5363454470636926 NRMSE: 0.09625207671225393 MAPE: 280.2953308487788 Pearson Correlation: 0.8161121853257635 Spearman Correlation: 0.5012523821949281 Coefficient of Determination: 0.6428254688684671 RMSE: 0.6318268142679099 NRMSE: 0.10764209657527811 MAPE: 1420.7544425542162 Protein: ERBB3 x_train_column_count: 2 x_train columns: ['ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.41413732939149617 Spearman Correlation: 0.45698503469565566 Coefficient of Determination: 0.17150972759552052 RMSE: 0.40516652442979906 NRMSE: 0.10934281600709196 MAPE: 181.65409597187795 Pearson Correlation: 0.3768403602362148 Spearman Correlation: 0.4409569798068482 Coefficient of Determination: 0.13832976304707267 RMSE: 0.4806312797016178 NRMSE: 0.17738155208043202 MAPE: 302.13924397439155 Predictor: ElasticNet Pearson Correlation: 0.4140202554588075 Spearman Correlation: 0.4574811032948563 Coefficient of Determination: 0.1681558775218711 RMSE: 0.40598578289037185 NRMSE: 0.10956391035155374 MAPE: 180.57274002624737 Pearson Correlation: 0.3821239191505737 Spearman Correlation: 0.4416544727343674 Coefficient of Determination: 0.14253747206924283 RMSE: 0.4794563339827928 NRMSE: 0.17694792717082394 MAPE: 298.18932508324974 Predictor: RandomForests Pearson Correlation: 0.49379269726620445 Spearman Correlation: 0.47011878226411286 Coefficient of Determination: 0.24235048330361064 RMSE: 0.38745745765908807 NRMSE: 0.10456364716462097 MAPE: 216.39720242867088 Pearson Correlation: 0.4332035050690915 Spearman Correlation: 0.44593650227107995 Coefficient of Determination: 0.18582907647625257 RMSE: 0.46719617614868336 NRMSE: 0.1724231991366529 MAPE: 360.2215328744491 Fold: 3 Protein: RB1 x_train_column_count: 2 x_train columns: ['RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.20549008280566838 Spearman Correlation: 0.2819802454315311 Coefficient of Determination: 0.04222617413148044 RMSE: 0.23544695065539922 NRMSE: 0.08610552613202137 MAPE: 195.68258151924317 Pearson Correlation: 0.21409658910713827 Spearman Correlation: 0.27253457025648703 Coefficient of Determination: 0.023470371248125454 RMSE: 0.2190483456261663 NRMSE: 0.1537030366323072 MAPE: 231.77158689364333 Predictor: ElasticNet Pearson Correlation: 0.20536425783313839 Spearman Correlation: 0.28181864803860485 Coefficient of Determination: 0.03897284962338965 RMSE: 0.23584648964374155 NRMSE: 0.08625164191184229 MAPE: 152.18347231450548 Pearson Correlation: 0.2109008845607475 Spearman Correlation: 0.26769161710245765 Coefficient of Determination: 0.01988598260982022 RMSE: 0.21944998998635348 NRMSE: 0.15398486463530142 MAPE: 208.55562782465543 Predictor: RandomForests Pearson Correlation: 0.3152095252059186 Spearman Correlation: 0.3523126286923159 Coefficient of Determination: 0.09183937689922117 RMSE: 0.22926772504859663 NRMSE: 0.08384571571408596 MAPE: 273.73383533728446 Pearson Correlation: 0.22969779464652873 Spearman Correlation: 0.2862101810314933 Coefficient of Determination: 0.02523111481047402 RMSE: 0.2188507776442057 NRMSE: 0.1535644060542864 MAPE: 236.05105884005155 Protein: CDH1 x_train_column_count: 2 x_train columns: ['CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.6311913671046153 Spearman Correlation: 0.601949787752189 Coefficient of Determination: 0.39840254190739344 RMSE: 0.9111357255334679 NRMSE: 0.1450806862095901 MAPE: 503.3037368248729 Pearson Correlation: 0.6707478230465697 Spearman Correlation: 0.47213306899088514 Coefficient of Determination: 0.43406320486557703 RMSE: 0.7083088750599962 NRMSE: 0.13924996560767433 MAPE: 251.88462492469498 Predictor: ElasticNet Pearson Correlation: 0.6118957207677801 Spearman Correlation: 0.6037505545036911 Coefficient of Determination: 0.3627126939812675 RMSE: 0.9377729757195957 NRMSE: 0.14932215147918787 MAPE: 589.2617568736696 Pearson Correlation: 0.6343689234082461 Spearman Correlation: 0.4723176099452612 Coefficient of Determination: 0.36009595418985374 RMSE: 0.7531754333011743 NRMSE: 0.14807050550489018 MAPE: 284.8151068052563 Predictor: RandomForests Pearson Correlation: 0.7255341506696129 Spearman Correlation: 0.6201341448080985 Coefficient of Determination: 0.5254743555827937 RMSE: 0.8092075444164823 NRMSE: 0.12885060100259263 MAPE: 278.9395763351217 Pearson Correlation: 0.7393813330136257 Spearman Correlation: 0.4674650763382962 Coefficient of Determination: 0.5442785883914165 RMSE: 0.6356066538055941 NRMSE: 0.12495707423536236 MAPE: 181.9962239203982 Protein: CDH2 x_train_column_count: 2 x_train columns: ['CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.14262397191829065 Spearman Correlation: -0.002487806216282824 Coefficient of Determination: 0.020341597365749253 RMSE: 0.377340550380385 NRMSE: 0.13672749850727772 MAPE: 204.8811447005443 Pearson Correlation: 0.1451886540719864 Spearman Correlation: 0.23133206149702618 Coefficient of Determination: 0.013947150404293174 RMSE: 0.32965523283104453 NRMSE: 0.17369656291812158 MAPE: 675.0963371430473 Predictor: ElasticNet Pearson Correlation: 0.1426127701108289 Spearman Correlation: -0.004338932550925531 Coefficient of Determination: 0.019271255403014664 RMSE: 0.3775466289313753 NRMSE: 0.13680217005992293 MAPE: 226.61163917347693 Pearson Correlation: 0.1451886540719864 Spearman Correlation: 0.23133206149702618 Coefficient of Determination: 0.011446861045972812 RMSE: 0.3300729141142803 NRMSE: 0.1739166407329654 MAPE: 660.5025650626128 Predictor: RandomForests Pearson Correlation: 0.23493300907448675 Spearman Correlation: 0.21194477216286742 Coefficient of Determination: 0.04976239614304989 RMSE: 0.3716312713312571 NRMSE: 0.1346587692337333 MAPE: 387.79228301128836 Pearson Correlation: -0.02522530974628973 Spearman Correlation: -0.1851350763201282 Coefficient of Determination: -0.0407518659493773 RMSE: 0.33867526307154056 NRMSE: 0.17844925025372552 MAPE: 642.4010366244271 Protein: CDH3 x_train_column_count: 2 x_train columns: ['CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.30283814136290493 Spearman Correlation: 0.33773943741990686 Coefficient of Determination: 0.09171093986413881 RMSE: 0.20253162635642266 NRMSE: 0.14209156027699857 MAPE: 362.0685498012418 Pearson Correlation: 0.22440362464908511 Spearman Correlation: 0.31279442387062184 Coefficient of Determination: 0.02387829200417091 RMSE: 0.1860662070685387 NRMSE: 0.1618431437443255 MAPE: 145.42988268223795 Predictor: ElasticNet Pearson Correlation: 0.30261469765849924 Spearman Correlation: 0.3386347347546788 Coefficient of Determination: 0.08667683033336748 RMSE: 0.2030921073878006 NRMSE: 0.14248478095905637 MAPE: 297.3853059154741 Pearson Correlation: 0.22440362464908517 Spearman Correlation: 0.31279442387062184 Coefficient of Determination: 0.042925379414417986 RMSE: 0.18424190653417474 NRMSE: 0.16025634010992262 MAPE: 132.17162239671106 Predictor: RandomForests Pearson Correlation: 0.38429063561532717 Spearman Correlation: 0.366929487494884 Coefficient of Determination: 0.14614884835263475 RMSE: 0.19636853167347101 NRMSE: 0.13776767390236222 MAPE: 480.79342950124743 Pearson Correlation: 0.27910731531306143 Spearman Correlation: 0.30860684283191253 Coefficient of Determination: 0.0655555461704449 RMSE: 0.1820506628174801 NRMSE: 0.15835036385874218 MAPE: 188.00773874257487 Protein: PTEN x_train_column_count: 2 x_train columns: ['PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 0.4072865131698381 Spearman Correlation: 0.42638558686882855 Coefficient of Determination: 0.16588230381004465 RMSE: 0.5747347789582132 NRMSE: 0.08986549588901778 MAPE: 404.258983398639 Pearson Correlation: 0.3940560499429465 Spearman Correlation: 0.41017718425416777 Coefficient of Determination: 0.14304763798020403 RMSE: 0.435974310134962 NRMSE: 0.1042352388789179 MAPE: 124.49067922176822 Predictor: ElasticNet Pearson Correlation: 0.3979269034940532 Spearman Correlation: 0.42112700580259477 Coefficient of Determination: 0.15605405434034525 RMSE: 0.5781108582108548 NRMSE: 0.09039337944036507 MAPE: 379.65499772988073 Pearson Correlation: 0.39956355343251104 Spearman Correlation: 0.39714460280053376 Coefficient of Determination: 0.141800261344453 RMSE: 0.4362914960365 NRMSE: 0.10431107350368193 MAPE: 110.07466070869415 Predictor: RandomForests Pearson Correlation: 0.4499028394581808 Spearman Correlation: 0.4412973672078478 Coefficient of Determination: 0.19785587470071297 RMSE: 0.5636117187462313 NRMSE: 0.08812629485516868 MAPE: 529.999627248055 Pearson Correlation: 0.36802569178054084 Spearman Correlation: 0.4052177336372629 Coefficient of Determination: 0.13057248218352524 RMSE: 0.439136210575846 NRMSE: 0.10499120417344379 MAPE: 127.15369103812762 Protein: BRCA2 x_train_column_count: 2 x_train columns: ['BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.04179287821102575 Spearman Correlation: 0.01939600332719568 Coefficient of Determination: 0.0017466446691614124 RMSE: 0.18988410127620753 NRMSE: 0.1279783930096026 MAPE: 117.54169381782826 Pearson Correlation: -0.0690262951226637 Spearman Correlation: 0.03567376151822342 Coefficient of Determination: -0.010202916830925446 RMSE: 0.2152210295729276 NRMSE: 0.14803116437483416 MAPE: 114.85888676192782 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: RandomForests Pearson Correlation: 0.2849110177207724 Spearman Correlation: 0.24877779152842033 Coefficient of Determination: 0.043480422447812805 RMSE: 0.18587250235652525 NRMSE: 0.1252746490958707 MAPE: 119.24195656500636 Pearson Correlation: -0.007658302865057336 Spearman Correlation: -0.1128019880749639 Coefficient of Determination: -0.011912642612302848 RMSE: 0.21540307883029233 NRMSE: 0.14815637966441225 MAPE: 156.92480290760244 Protein: CDKN2A x_train_column_count: 2 x_train columns: ['CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.5076933438635841 Spearman Correlation: 0.4769078997141356 Coefficient of Determination: 0.2577525314033874 RMSE: 0.5751523859196203 NRMSE: 0.13428100156883177 MAPE: 172.97551216097764 Pearson Correlation: 0.536825509758858 Spearman Correlation: 0.5740296013666005 Coefficient of Determination: 0.2814813280860866 RMSE: 0.5565203157253399 NRMSE: 0.1718132554491494 MAPE: 120.10925571451656 Predictor: ElasticNet Pearson Correlation: 0.5076634573044784 Spearman Correlation: 0.4770131653521852 Coefficient of Determination: 0.2547918532150383 RMSE: 0.5762983288161221 NRMSE: 0.13454854520361462 MAPE: 188.28668730393682 Pearson Correlation: 0.536825509758858 Spearman Correlation: 0.5740296013666005 Coefficient of Determination: 0.27198375273225617 RMSE: 0.5601863593028318 NRMSE: 0.17294506477195262 MAPE: 124.46647817331929 Predictor: RandomForests Pearson Correlation: 0.6245172571557215 Spearman Correlation: 0.4954089061519607 Coefficient of Determination: 0.3894788522073944 RMSE: 0.5216256263174344 NRMSE: 0.12178409280851568 MAPE: 264.11801229845923 Pearson Correlation: 0.6251797457998285 Spearman Correlation: 0.5733110855363031 Coefficient of Determination: 0.38811166296195954 RMSE: 0.5135681488886652 NRMSE: 0.15855273035369863 MAPE: 124.73179501297591 Protein: TP53 x_train_column_count: 2 x_train columns: ['TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.505393123628269 Spearman Correlation: 0.41983908151648314 Coefficient of Determination: 0.2554222094107388 RMSE: 0.3883974839700309 NRMSE: 0.09334234173757051 MAPE: 785.5119511258362 Pearson Correlation: 0.4439948905095552 Spearman Correlation: 0.4119876806443971 Coefficient of Determination: 0.17360345730876137 RMSE: 0.39130489479964814 NRMSE: 0.14591727410686847 MAPE: 495.7762177532588 Predictor: ElasticNet Pearson Correlation: 0.4990995091643679 Spearman Correlation: 0.40986504691159986 Coefficient of Determination: 0.23502556199588553 RMSE: 0.3936813402881795 NRMSE: 0.09461219425334765 MAPE: 650.4866090753518 Pearson Correlation: 0.4439826546859982 Spearman Correlation: 0.41461115475255306 Coefficient of Determination: 0.17189418617854657 RMSE: 0.39170936204492507 NRMSE: 0.1460680996106653 MAPE: 416.72353153681854 Predictor: RandomForests Pearson Correlation: 0.5623094510875953 Spearman Correlation: 0.47048895812635816 Coefficient of Determination: 0.3097778302986154 RMSE: 0.3739519663833114 NRMSE: 0.08987069607866173 MAPE: 682.725921080577 Pearson Correlation: 0.4718926826594622 Spearman Correlation: 0.4533407801460297 Coefficient of Determination: 0.21127649970614626 RMSE: 0.38228162652909115 NRMSE: 0.14255250477463507 MAPE: 388.2496282805142 Protein: CTNNB1 x_train_column_count: 2 x_train columns: ['CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.051787596630752754 Spearman Correlation: 0.07970674194829598 Coefficient of Determination: 0.002681955164789862 RMSE: 0.7681652712541103 NRMSE: 0.15109466389734663 MAPE: 433.48605566468893 Pearson Correlation: 0.2197278389173596 Spearman Correlation: 0.26859935909425303 Coefficient of Determination: 0.00953303186993304 RMSE: 0.6100416416125433 NRMSE: 0.1994317047345592 MAPE: 1336.6191149722124 Predictor: ElasticNet Pearson Correlation: 0.05174747566636725 Spearman Correlation: 0.07873234122650967 Coefficient of Determination: 0.002442568659393962 RMSE: 0.7682574571758598 NRMSE: 0.15111279645473247 MAPE: 436.76103639925304 Pearson Correlation: 0.21972783891735967 Spearman Correlation: 0.26859935909425303 Coefficient of Determination: 0.0046405049202843385 RMSE: 0.6115464714515952 NRMSE: 0.19992365603700518 MAPE: 1350.458783631987 Predictor: RandomForests Pearson Correlation: 0.28283871709746194 Spearman Correlation: 0.27248155031404964 Coefficient of Determination: 0.056911975463831976 RMSE: 0.7469885508843376 NRMSE: 0.14692929797095547 MAPE: 449.58995100093125 Pearson Correlation: 0.20590790949456775 Spearman Correlation: 0.1399556799237513 Coefficient of Determination: 0.026453487374958562 RMSE: 0.6048084295659103 NRMSE: 0.1977208897204584 MAPE: 1426.5538436896502 Protein: CCNE1 x_train_column_count: 2 x_train columns: ['CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.7311597617400974 Spearman Correlation: 0.7252454530166649 Coefficient of Determination: 0.5345945971878361 RMSE: 0.3564002360438113 NRMSE: 0.08601014456737006 MAPE: 77.47995130978394 Pearson Correlation: 0.6686208249928275 Spearman Correlation: 0.6712078704223245 Coefficient of Determination: 0.4364774974494381 RMSE: 0.27391509441277184 NRMSE: 0.11931658945540438 MAPE: 97.29074571714725 Predictor: ElasticNet Pearson Correlation: 0.731155078102014 Spearman Correlation: 0.724580992574438 Coefficient of Determination: 0.529375815932183 RMSE: 0.35839289634201255 NRMSE: 0.08649103369983652 MAPE: 79.85508250013564 Pearson Correlation: 0.6686208249928276 Spearman Correlation: 0.6712078704223245 Coefficient of Determination: 0.4457022094080316 RMSE: 0.27166388522554374 NRMSE: 0.11833596951933778 MAPE: 100.28697659723025 Predictor: RandomForests Pearson Correlation: 0.8620576959955392 Spearman Correlation: 0.7260197277689745 Coefficient of Determination: 0.7409729273935419 RMSE: 0.26588562094289714 NRMSE: 0.06416623330426845 MAPE: 55.85462183805717 Pearson Correlation: 0.7693889488812767 Spearman Correlation: 0.6683249776710507 Coefficient of Determination: 0.5225628425841873 RMSE: 0.25212646899839464 NRMSE: 0.10982552990303378 MAPE: 78.16212414126768 Protein: CCND1 x_train_column_count: 2 x_train columns: ['CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.41041993626280215 Spearman Correlation: 0.40702588796834765 Coefficient of Determination: 0.16844452408196253 RMSE: 0.2231013144804463 NRMSE: 0.13412205845814423 MAPE: 532.0448309434951 Pearson Correlation: 0.3721019412428962 Spearman Correlation: 0.3490592152021846 Coefficient of Determination: 0.11233592807704806 RMSE: 0.197608097567355 NRMSE: 0.18724768325296826 MAPE: 345.7158784675023 Predictor: ElasticNet Pearson Correlation: 0.41041993626280215 Spearman Correlation: 0.40702588796834765 Coefficient of Determination: 0.16427487071655444 RMSE: 0.22365996146665226 NRMSE: 0.13445790087088785 MAPE: 545.4689758812548 Pearson Correlation: 0.3721019412428963 Spearman Correlation: 0.3490592152021846 Coefficient of Determination: 0.10339993018972804 RMSE: 0.19860025425351416 NRMSE: 0.1881878220589902 MAPE: 364.49366468960335 Predictor: RandomForests Pearson Correlation: 0.48699822442771834 Spearman Correlation: 0.43302356100040734 Coefficient of Determination: 0.2329800130729628 RMSE: 0.21426925304637665 NRMSE: 0.12881247853601416 MAPE: 532.0829627883396 Pearson Correlation: 0.3682241478957792 Spearman Correlation: 0.3545397794492318 Coefficient of Determination: 0.12538407752351843 RMSE: 0.19615035827191662 NRMSE: 0.18586637191391944 MAPE: 242.12255902019984 Protein: ERBB2 x_train_column_count: 2 x_train columns: ['ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 0.7577714831756105 Spearman Correlation: 0.6100374255569257 Coefficient of Determination: 0.5742176207141645 RMSE: 0.6402754959744398 NRMSE: 0.10908146855451553 MAPE: 317.38426815975174 Pearson Correlation: 0.7896049001679225 Spearman Correlation: 0.6822013768273945 Coefficient of Determination: 0.6161032986933297 RMSE: 0.6608224721923278 NRMSE: 0.11920457323622337 MAPE: 140.91306317862313 Predictor: ElasticNet Pearson Correlation: 0.7576307424036323 Spearman Correlation: 0.6175542476381123 Coefficient of Determination: 0.5677794520989932 RMSE: 0.6450980717436423 NRMSE: 0.10990307370796502 MAPE: 343.104702446374 Pearson Correlation: 0.7901604979795928 Spearman Correlation: 0.693151651706485 Coefficient of Determination: 0.6242465958514785 RMSE: 0.6537761526235832 NRMSE: 0.11793350036503053 MAPE: 152.67425661390087 Predictor: RandomForests Pearson Correlation: 0.819999050484025 Spearman Correlation: 0.6221160255281639 Coefficient of Determination: 0.670233501848126 RMSE: 0.5634771446431789 NRMSE: 0.09599760543863893 MAPE: 549.6016379139869 Pearson Correlation: 0.8604407371645878 Spearman Correlation: 0.6851291397706071 Coefficient of Determination: 0.7380335646767575 RMSE: 0.5458840920255202 NRMSE: 0.09847104625613685 MAPE: 202.52741537438453 Protein: ERBB3 x_train_column_count: 2 x_train columns: ['ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.4155168149349654 Spearman Correlation: 0.4488994615192051 Coefficient of Determination: 0.1726542234936983 RMSE: 0.41022704953773176 NRMSE: 0.14874778344799855 MAPE: 207.48876867550993 Pearson Correlation: 0.3928885858038079 Spearman Correlation: 0.4288257958328658 Coefficient of Determination: 0.12949497157397416 RMSE: 0.4615796450969211 NRMSE: 0.12833242374280146 MAPE: 147.588724629526 Predictor: ElasticNet Pearson Correlation: 0.4118347805352838 Spearman Correlation: 0.4548855783210745 Coefficient of Determination: 0.16668927692967994 RMSE: 0.41170320847955105 NRMSE: 0.14928303672020474 MAPE: 203.24784581622802 Pearson Correlation: 0.39517943353034346 Spearman Correlation: 0.4259180289031036 Coefficient of Determination: 0.12894589615891472 RMSE: 0.46172519398784073 NRMSE: 0.12837289052278883 MAPE: 140.94352484303514 Predictor: RandomForests Pearson Correlation: 0.4999772787130883 Spearman Correlation: 0.47145580278027005 Coefficient of Determination: 0.24936566604040078 RMSE: 0.39074639408774725 NRMSE: 0.14168412364895636 MAPE: 239.36369085083874 Pearson Correlation: 0.40632927276753494 Spearman Correlation: 0.4286995163716889 Coefficient of Determination: 0.13799826967697426 RMSE: 0.45931970330957334 NRMSE: 0.1277040948938829 MAPE: 166.28304846884032 Fold: 4 Protein: RB1 x_train_column_count: 2 x_train columns: ['RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.20060692894164192 Spearman Correlation: 0.2604016377206075 Coefficient of Determination: 0.04024313993939688 RMSE: 0.24639807895111004 NRMSE: 0.0901104735777904 MAPE: 268.47458457307584 Pearson Correlation: 0.3019690157807047 Spearman Correlation: 0.3648499357847355 Coefficient of Determination: 0.0002383205805432942 RMSE: 0.16486270055052632 NRMSE: 0.15795682802909433 MAPE: 110.55468116716203 Predictor: ElasticNet Pearson Correlation: 0.20060321424304425 Spearman Correlation: 0.2604333098848863 Coefficient of Determination: 0.03739989858056081 RMSE: 0.24676278127989185 NRMSE: 0.09024384921002482 MAPE: 212.00340198872664 Pearson Correlation: 0.3029177651686273 Spearman Correlation: 0.3658524420503997 Coefficient of Determination: 0.0006857019454489244 RMSE: 0.16482580938203745 NRMSE: 0.1579214821810806 MAPE: 102.35926282834133 Predictor: RandomForests Pearson Correlation: 0.33587973872955107 Spearman Correlation: 0.36911122268200713 Coefficient of Determination: 0.09983840079293904 RMSE: 0.23862555200044613 NRMSE: 0.08726797542438786 MAPE: 320.43761060518545 Pearson Correlation: 0.24547585772582137 Spearman Correlation: 0.34021236661701987 Coefficient of Determination: -0.038688053316477955 RMSE: 0.16804157162155683 NRMSE: 0.16100254054876484 MAPE: 112.68516338634271 Protein: CDH1 x_train_column_count: 2 x_train columns: ['CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 0.6283561737259781 Spearman Correlation: 0.6043608023599538 Coefficient of Determination: 0.39483148105955135 RMSE: 0.8705077411210568 NRMSE: 0.1386114679661566 MAPE: 525.2992992842647 Pearson Correlation: 0.6594828350563262 Spearman Correlation: 0.4286861432187434 Coefficient of Determination: 0.40975344237495814 RMSE: 0.8961522253801608 NRMSE: 0.1625761448024674 MAPE: 266.14079405117417 Predictor: ElasticNet Pearson Correlation: 0.6101146633791258 Spearman Correlation: 0.6046399181239875 Coefficient of Determination: 0.36009222878580904 RMSE: 0.8951445375183613 NRMSE: 0.14253439978318544 MAPE: 601.3666523370377 Pearson Correlation: 0.5984222849208914 Spearman Correlation: 0.43423733463010766 Coefficient of Determination: 0.3242141759611985 RMSE: 0.958891778031604 NRMSE: 0.17395808897202641 MAPE: 309.9398081512885 Predictor: RandomForests Pearson Correlation: 0.7170868613481379 Spearman Correlation: 0.6164999574023463 Coefficient of Determination: 0.5134008218156312 RMSE: 0.7805849239532742 NRMSE: 0.12429300403701699 MAPE: 350.21685279617446 Pearson Correlation: 0.7534410121952042 Spearman Correlation: 0.4433914078848621 Coefficient of Determination: 0.5171438694520781 RMSE: 0.810539027555178 NRMSE: 0.14704456071172636 MAPE: 167.69272835039988 Protein: CDH2 x_train_column_count: 2 x_train columns: ['CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.12726667220597054 Spearman Correlation: 0.07119849272849263 Coefficient of Determination: 0.01619680585438199 RMSE: 0.37627875453652904 NRMSE: 0.1363427619887416 MAPE: 647.1392020301222 Pearson Correlation: 0.20599048693772695 Spearman Correlation: -0.07145475629371938 Coefficient of Determination: -0.01867412055318085 RMSE: 0.3363643732494896 NRMSE: 0.17351965109234532 MAPE: 149.99280153684538 Predictor: ElasticNet Pearson Correlation: 0.12726575412288094 Spearman Correlation: 0.07146547137499795 Coefficient of Determination: 0.014844399422336396 RMSE: 0.3765372955966969 NRMSE: 0.13643644307438835 MAPE: 665.1421303189429 Pearson Correlation: 0.20599048693772687 Spearman Correlation: -0.07145475629371938 Coefficient of Determination: -0.023136305416066705 RMSE: 0.33710027098296363 NRMSE: 0.17389927725999937 MAPE: 151.66683021744882 Predictor: RandomForests Pearson Correlation: 0.20068017063291904 Spearman Correlation: 0.19591540058773488 Coefficient of Determination: 0.035911956927223376 RMSE: 0.37248941165378463 NRMSE: 0.13496971217254317 MAPE: 884.409767131594 Pearson Correlation: 0.13975849733951237 Spearman Correlation: -0.007879855739278996 Coefficient of Determination: -0.03649031714906359 RMSE: 0.33929306149406074 NRMSE: 0.1750304679408922 MAPE: 184.58079283105226 Protein: CDH3 x_train_column_count: 2 x_train columns: ['CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.25979163381132686 Spearman Correlation: 0.33119749144119476 Coefficient of Determination: 0.06749169299835855 RMSE: 0.19884009086432752 NRMSE: 0.14171079925333718 MAPE: 172.25145757407995 Pearson Correlation: 0.4067251191721419 Spearman Correlation: 0.3183905036222397 Coefficient of Determination: 0.03883447609789603 RMSE: 0.20372141380738007 NRMSE: 0.18132101554673624 MAPE: 583.0807418997691 Predictor: ElasticNet Pearson Correlation: 0.2585402732845947 Spearman Correlation: 0.3309265441567785 Coefficient of Determination: 0.0628246488353148 RMSE: 0.19933705011951847 NRMSE: 0.14206497578254376 MAPE: 165.19569965309185 Pearson Correlation: 0.4135532481751863 Spearman Correlation: 0.3220264591827829 Coefficient of Determination: 0.015679514978452547 RMSE: 0.20616068609513216 NRMSE: 0.18349207513317917 MAPE: 491.046844980752 Predictor: RandomForests Pearson Correlation: 0.3661650806172687 Spearman Correlation: 0.35439273671084043 Coefficient of Determination: 0.13219300783029397 RMSE: 0.19181791710406904 NRMSE: 0.13670618548688587 MAPE: 233.9258036788603 Pearson Correlation: 0.3409632548764403 Spearman Correlation: 0.30228083799903893 Coefficient of Determination: 0.027424343098695014 RMSE: 0.20492704927339866 NRMSE: 0.18239408412108035 MAPE: 815.7562828804256 Protein: PTEN x_train_column_count: 2 x_train columns: ['PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 0.39878139984580147 Spearman Correlation: 0.4180860156644668 Coefficient of Determination: 0.15902660486297693 RMSE: 0.5151792949664966 NRMSE: 0.09965554297556806 MAPE: 256.2479847170031 Pearson Correlation: 0.45693850315453 Spearman Correlation: 0.4803975111909126 Coefficient of Determination: 0.1711906664926537 RMSE: 0.6787604679974607 NRMSE: 0.1061309464463233 MAPE: 583.3344326217792 Predictor: ElasticNet Pearson Correlation: 0.39770673577924787 Spearman Correlation: 0.4125541754874478 Coefficient of Determination: 0.15593316353319042 RMSE: 0.5161259444527917 NRMSE: 0.0998386614927251 MAPE: 232.56749140641185 Pearson Correlation: 0.4352330047258671 Spearman Correlation: 0.4688213069988404 Coefficient of Determination: 0.1462873874679229 RMSE: 0.688882373666753 NRMSE: 0.10771360701536283 MAPE: 502.8216370519843 Predictor: RandomForests Pearson Correlation: 0.4478237093284196 Spearman Correlation: 0.4392056931844835 Coefficient of Determination: 0.19412017651037705 RMSE: 0.5043156127290602 NRMSE: 0.09755408788476096 MAPE: 267.2985539429079 Pearson Correlation: 0.43694710197252795 Spearman Correlation: 0.47224052214471246 Coefficient of Determination: 0.1541743166419286 RMSE: 0.685692908536918 NRMSE: 0.10721490243716957 MAPE: 505.48158517052127 Protein: BRCA2 x_train_column_count: 2 x_train columns: ['BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.03135540023922831 Spearman Correlation: 0.022070337100895607 Coefficient of Determination: 0.0009831611241620797 RMSE: 0.1917029603855912 NRMSE: 0.12350005500762842 MAPE: 112.56460310840531 Pearson Correlation: -0.15046217289321684 Spearman Correlation: -0.17513185949949503 Coefficient of Determination: -0.009292734561542115 RMSE: 0.20907209366483526 NRMSE: 0.20311868500727212 MAPE: 147.0957771856994 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: RandomForests Pearson Correlation: 0.29655276349912 Spearman Correlation: 0.22726838369478033 Coefficient of Determination: 0.043457546176612016 RMSE: 0.1875834591496981 NRMSE: 0.12084616469621395 MAPE: 118.91691027594236 Pearson Correlation: -0.017904957737888395 Spearman Correlation: -0.025811139021213243 Coefficient of Determination: -0.009008578168265391 RMSE: 0.20904266050231404 NRMSE: 0.20309008996542738 MAPE: 117.9011717023568 Protein: CDKN2A x_train_column_count: 2 x_train columns: ['CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.5089221041870784 Spearman Correlation: 0.5041911579291467 Coefficient of Determination: 0.2590017081302034 RMSE: 0.5801489558247752 NRMSE: 0.13115156681920992 MAPE: 149.93930972745514 Pearson Correlation: 0.5446033666939746 Spearman Correlation: 0.4884824000299256 Coefficient of Determination: 0.2777407009263907 RMSE: 0.5359847673250288 NRMSE: 0.16148983649443469 MAPE: 114.82947426453738 Predictor: ElasticNet Pearson Correlation: 0.5089092587161527 Spearman Correlation: 0.5043429685491743 Coefficient of Determination: 0.25613489503473175 RMSE: 0.5812701278289657 NRMSE: 0.13140502494155434 MAPE: 163.75058020176775 Pearson Correlation: 0.5446033666939745 Spearman Correlation: 0.4884824000299256 Coefficient of Determination: 0.26924794649510864 RMSE: 0.5391267717753642 NRMSE: 0.162436508519242 MAPE: 121.9144155211524 Predictor: RandomForests Pearson Correlation: 0.6315021316579708 Spearman Correlation: 0.5175085850702341 Coefficient of Determination: 0.39829848360987263 RMSE: 0.5227830094552866 NRMSE: 0.11818311505714627 MAPE: 286.8091880382585 Pearson Correlation: 0.6229828385819468 Spearman Correlation: 0.48235825210423916 Coefficient of Determination: 0.3606879562454919 RMSE: 0.5042690563417233 NRMSE: 0.1519340332454725 MAPE: 126.41263181421061 Protein: TP53 x_train_column_count: 2 x_train columns: ['TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 0.4860893149117717 Spearman Correlation: 0.4243656276327849 Coefficient of Determination: 0.2362828220713954 RMSE: 0.3933632479692207 NRMSE: 0.09453574813006986 MAPE: 828.1545630718925 Pearson Correlation: 0.5182851011843874 Spearman Correlation: 0.3708300602251899 Coefficient of Determination: 0.2663495972611568 RMSE: 0.3698619384945788 NRMSE: 0.11737177535369979 MAPE: 312.6650147920584 Predictor: ElasticNet Pearson Correlation: 0.4799943537083187 Spearman Correlation: 0.4160652085950165 Coefficient of Determination: 0.21665806765060291 RMSE: 0.39838519371924813 NRMSE: 0.095742656505467 MAPE: 695.0218890912477 Pearson Correlation: 0.5234550152101192 Spearman Correlation: 0.37665556927143734 Coefficient of Determination: 0.24287301578807285 RMSE: 0.37573307242039594 NRMSE: 0.11923491762515738 MAPE: 239.98333661525803 Predictor: RandomForests Pearson Correlation: 0.5433299028550151 Spearman Correlation: 0.47716216341157186 Coefficient of Determination: 0.28875859293730977 RMSE: 0.3796085782752249 NRMSE: 0.09123013176525473 MAPE: 734.2104172925882 Pearson Correlation: 0.573766741233823 Spearman Correlation: 0.4235391959329385 Coefficient of Determination: 0.3114762468831195 RMSE: 0.35830636664522525 NRMSE: 0.11370473681303161 MAPE: 259.9091372224781 Protein: CTNNB1 x_train_column_count: 2 x_train columns: ['CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.108436303571539 Spearman Correlation: 0.1359617506577901 Coefficient of Determination: 0.011758431932259117 RMSE: 0.7072318312612121 NRMSE: 0.17081244113158445 MAPE: 573.7039748296245 Pearson Correlation: -0.09138017300424381 Spearman Correlation: 0.03373358770059477 Coefficient of Determination: -0.1681635116379343 RMSE: 0.8673055149001679 NRMSE: 0.18234494888995204 MAPE: 970.4637210419447 Predictor: ElasticNet Pearson Correlation: 0.10830589448220501 Spearman Correlation: 0.13480386712524542 Coefficient of Determination: 0.01127653538491935 RMSE: 0.7074042440857459 NRMSE: 0.1708540827180335 MAPE: 584.8517500645364 Pearson Correlation: -0.09138017300424384 Spearman Correlation: 0.03373358770059477 Coefficient of Determination: -0.16345293088314627 RMSE: 0.8655550580398204 NRMSE: 0.18197692751657144 MAPE: 962.2956945388241 Predictor: RandomForests Pearson Correlation: 0.27073272495551043 Spearman Correlation: 0.25332746502304954 Coefficient of Determination: 0.05488063472280302 RMSE: 0.6916295995789115 NRMSE: 0.16704415022193786 MAPE: 598.8045248717256 Pearson Correlation: 0.07267382808851819 Spearman Correlation: 0.13823949839064295 Coefficient of Determination: -0.133416084696651 RMSE: 0.8543089877843627 NRMSE: 0.17961251950726656 MAPE: 916.3275962998433 Protein: CCNE1 x_train_column_count: 2 x_train columns: ['CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.7284683731401493 Spearman Correlation: 0.7111124100209031 Coefficient of Determination: 0.5306661706654558 RMSE: 0.34583107511272226 NRMSE: 0.08345948671784209 MAPE: 76.12249959628302 Pearson Correlation: 0.8235508887291155 Spearman Correlation: 0.7249192633324606 Coefficient of Determination: 0.477306535508325 RMSE: 0.3268515515359732 NRMSE: 0.13337613300251908 MAPE: 111.11785800324698 Predictor: ElasticNet Pearson Correlation: 0.7284659471489124 Spearman Correlation: 0.7105645817584747 Coefficient of Determination: 0.5259797603572383 RMSE: 0.3475533892772843 NRMSE: 0.08387513316052907 MAPE: 78.18876483857412 Pearson Correlation: 0.8235508887291155 Spearman Correlation: 0.7249192633324606 Coefficient of Determination: 0.44376774097369276 RMSE: 0.33717479499268926 NRMSE: 0.13758867011861964 MAPE: 113.97274513138382 Predictor: RandomForests Pearson Correlation: 0.8558319038801104 Spearman Correlation: 0.7158571558170889 Coefficient of Determination: 0.7288377951807345 RMSE: 0.26286796528567175 NRMSE: 0.06343798182437718 MAPE: 55.5244048092431 Pearson Correlation: 0.8456838474620257 Spearman Correlation: 0.7088274541368929 Coefficient of Determination: 0.7022821756292825 RMSE: 0.24667744086523613 NRMSE: 0.10066001830785773 MAPE: 69.87901290517232 Protein: CCND1 x_train_column_count: 2 x_train columns: ['CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 0.3685130012930122 Spearman Correlation: 0.3770817368013094 Coefficient of Determination: 0.1358018321219837 RMSE: 0.22339496125150415 NRMSE: 0.14272432070348204 MAPE: 535.7883211967126 Pearson Correlation: 0.6012892043958129 Spearman Correlation: 0.49870696642102774 Coefficient of Determination: 0.2640304431782867 RMSE: 0.19645763795204482 NRMSE: 0.12390113392535623 MAPE: 466.48624547544284 Predictor: ElasticNet Pearson Correlation: 0.3660328383185607 Spearman Correlation: 0.3728160125831736 Coefficient of Determination: 0.1298037859493535 RMSE: 0.2241688672798259 NRMSE: 0.1432187598419557 MAPE: 553.4164032365017 Pearson Correlation: 0.6012892043958129 Spearman Correlation: 0.49870696642102774 Coefficient of Determination: 0.2290437834431409 RMSE: 0.20107304293655576 NRMSE: 0.1268119594705826 MAPE: 470.1670883042029 Predictor: RandomForests Pearson Correlation: 0.4536960474814516 Spearman Correlation: 0.39958941232777434 Coefficient of Determination: 0.2019813527443235 RMSE: 0.2146709224136968 NRMSE: 0.1371506385132421 MAPE: 504.6727797801616 Pearson Correlation: 0.5244663896500243 Spearman Correlation: 0.5018856606099847 Coefficient of Determination: 0.2568204270681399 RMSE: 0.1974176032612837 NRMSE: 0.12450656108809517 MAPE: 425.3854561538555 Protein: ERBB2 x_train_column_count: 2 x_train columns: ['ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 0.7682081923909598 Spearman Correlation: 0.6162165032172298 Coefficient of Determination: 0.590143826856586 RMSE: 0.6279242487374764 NRMSE: 0.10697723030776299 MAPE: 241.5484702028777 Pearson Correlation: 0.7616187596336662 Spearman Correlation: 0.6420536940037835 Coefficient of Determination: 0.5262982087977873 RMSE: 0.713495742528176 NRMSE: 0.128479083539485 MAPE: 138.43731356115453 Predictor: ElasticNet Pearson Correlation: 0.7679926094943189 Spearman Correlation: 0.6238582415521245 Coefficient of Determination: 0.5840598813714064 RMSE: 0.6325675655113283 NRMSE: 0.10776829574106485 MAPE: 267.58185132343596 Pearson Correlation: 0.7633533110364075 Spearman Correlation: 0.67230847305938 Coefficient of Determination: 0.5268749073632553 RMSE: 0.7130612948549206 NRMSE: 0.12840085260469633 MAPE: 130.52380722523606 Predictor: RandomForests Pearson Correlation: 0.837912110164944 Spearman Correlation: 0.6242468308358713 Coefficient of Determination: 0.7012149842957249 RMSE: 0.5361310018094477 NRMSE: 0.09133873993721106 MAPE: 438.3412943231485 Pearson Correlation: 0.7903040042412042 Spearman Correlation: 0.6588300179349611 Coefficient of Determination: 0.5700413694558568 RMSE: 0.6797546826519252 NRMSE: 0.12240333537147066 MAPE: 216.94371412894742 Protein: ERBB3 x_train_column_count: 2 x_train columns: ['ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.4273351658974776 Spearman Correlation: 0.4720962329906372 Coefficient of Determination: 0.18261534401262458 RMSE: 0.43189968271364565 NRMSE: 0.11809604716015457 MAPE: 214.16240623612234 Pearson Correlation: 0.32144555613857656 Spearman Correlation: 0.3196972530829562 Coefficient of Determination: 0.05426262057332698 RMSE: 0.3740011144567562 NRMSE: 0.1840855623485882 MAPE: 195.28806863141338 Predictor: ElasticNet Pearson Correlation: 0.4247436800277297 Spearman Correlation: 0.47559620013365334 Coefficient of Determination: 0.1774763357234298 RMSE: 0.4332552613424271 NRMSE: 0.11846670841340677 MAPE: 209.51300926112899 Pearson Correlation: 0.3203755812394411 Spearman Correlation: 0.3203655905933989 Coefficient of Determination: 0.07822509935332034 RMSE: 0.369232616863482 NRMSE: 0.1817384796071616 MAPE: 186.2955799530054 Predictor: RandomForests Pearson Correlation: 0.5017575914848379 Spearman Correlation: 0.4921605147487151 Coefficient of Determination: 0.2503000193256526 RMSE: 0.41363129949439237 NRMSE: 0.11310085051484675 MAPE: 238.28030543478857 Pearson Correlation: 0.4041323955475392 Spearman Correlation: 0.32032765592468015 Coefficient of Determination: 0.13857368373267354 RMSE: 0.3569412060034264 NRMSE: 0.1756885744256825 MAPE: 237.4408613379951 Fold: 5 Protein: RB1 x_train_column_count: 2 x_train columns: ['RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.20085496902715008 Spearman Correlation: 0.2752781534619621 Coefficient of Determination: 0.04034271858289751 RMSE: 0.2291383097824755 NRMSE: 0.11319776398061263 MAPE: 189.78459765872557 Pearson Correlation: 0.20388375085778995 Spearman Correlation: 0.27589122058878546 Coefficient of Determination: -0.051650420135788355 RMSE: 0.24649895679720493 NRMSE: 0.12428602383740643 MAPE: 398.83457702169636 Predictor: ElasticNet Pearson Correlation: 0.1957839780891683 Spearman Correlation: 0.27154453701595577 Coefficient of Determination: 0.03534813631583633 RMSE: 0.22973381660399553 NRMSE: 0.11349195328791467 MAPE: 160.26534077226154 Pearson Correlation: 0.22446261577437424 Spearman Correlation: 0.28244990585917534 Coefficient of Determination: -0.05727768553947543 RMSE: 0.24715757129406746 NRMSE: 0.12461810060608851 MAPE: 300.07055152820527 Predictor: RandomForests Pearson Correlation: 0.31485917689054416 Spearman Correlation: 0.35980883320861423 Coefficient of Determination: 0.09143497772665987 RMSE: 0.22295521264550094 NRMSE: 0.11014322119793744 MAPE: 211.11353689620057 Pearson Correlation: 0.21073876889670415 Spearman Correlation: 0.23734088200910924 Coefficient of Determination: -0.048930325756177284 RMSE: 0.24617996555346097 NRMSE: 0.12412518683493384 MAPE: 529.0963669136031 Protein: CDH1 x_train_column_count: 2 x_train columns: ['CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.6708049982918736 Spearman Correlation: 0.5863907407236872 Coefficient of Determination: 0.44997934573336085 RMSE: 0.8351336136424327 NRMSE: 0.13297882450279172 MAPE: 239.97315127050146 Pearson Correlation: 0.4947900491430657 Spearman Correlation: 0.5419893016122396 Coefficient of Determination: 0.23097867498219748 RMSE: 1.0187814848685817 NRMSE: 0.20034640122486908 MAPE: 1057.7388099624375 Predictor: ElasticNet Pearson Correlation: 0.6463856301676411 Spearman Correlation: 0.5872866545482749 Coefficient of Determination: 0.4023561995879824 RMSE: 0.8705378817723547 NRMSE: 0.1386162672800794 MAPE: 267.86451286004353 Pearson Correlation: 0.5054678157533522 Spearman Correlation: 0.5419893016122396 Coefficient of Determination: 0.24636642025077993 RMSE: 1.0085373180003736 NRMSE: 0.1983318554208125 MAPE: 1358.3480218757825 Predictor: RandomForests Pearson Correlation: 0.752527698805492 Spearman Correlation: 0.5997030844442153 Coefficient of Determination: 0.5655603073095317 RMSE: 0.7422175409284361 NRMSE: 0.11818374270380497 MAPE: 167.71007551694782 Pearson Correlation: 0.6207617657985194 Spearman Correlation: 0.5415000057010412 Coefficient of Determination: 0.37224542865460575 RMSE: 0.9204639713007754 NRMSE: 0.18101197052187282 MAPE: 664.1049782598297 Protein: CDH2 x_train_column_count: 2 x_train columns: ['CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.1377934891308288 Spearman Correlation: 0.08045708714407543 Coefficient of Determination: 0.01898704564684761 RMSE: 0.35571059757383505 NRMSE: 0.1747019289690266 MAPE: 223.60576997937054 Pearson Correlation: 0.1537883558217415 Spearman Correlation: -0.1015076266632875 Coefficient of Determination: 0.003933247704367537 RMSE: 0.4162705035251315 NRMSE: 0.1556646050240755 MAPE: 219.44314124904815 Predictor: ElasticNet Pearson Correlation: 0.13776475523400486 Spearman Correlation: 0.07886292148061753 Coefficient of Determination: 0.016572710910836785 RMSE: 0.3561480416993742 NRMSE: 0.1749167730953166 MAPE: 213.01924247460425 Pearson Correlation: 0.1537883558217415 Spearman Correlation: -0.1015076266632875 Coefficient of Determination: 0.010891144896671756 RMSE: 0.4148140533645954 NRMSE: 0.15511996461103356 MAPE: 354.29572101398924 Predictor: RandomForests Pearson Correlation: 0.22256805431603133 Spearman Correlation: 0.23310447235810897 Coefficient of Determination: 0.04505475310564411 RMSE: 0.3509527652907008 NRMSE: 0.17236519094872588 MAPE: 516.3906532757959 Pearson Correlation: 0.026135634300607852 Spearman Correlation: 0.01272366311076386 Coefficient of Determination: -0.02965335260008506 RMSE: 0.42323047837424443 NRMSE: 0.15826729180272028 MAPE: 421.1178441241013 Protein: CDH3 x_train_column_count: 2 x_train columns: ['CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.2913473653177705 Spearman Correlation: 0.340226826258159 Coefficient of Determination: 0.08488328727760619 RMSE: 0.1949277980846216 NRMSE: 0.13675688814378234 MAPE: 331.69152539794436 Pearson Correlation: 0.26590030103423073 Spearman Correlation: 0.2940460604246936 Coefficient of Determination: 0.06636783528346579 RMSE: 0.21585186059783476 NRMSE: 0.19474360161841478 MAPE: 122.57887592000752 Predictor: ElasticNet Pearson Correlation: 0.29131399778415096 Spearman Correlation: 0.34098087037844793 Coefficient of Determination: 0.08010585958911676 RMSE: 0.19543595250443696 NRMSE: 0.13711339767107045 MAPE: 271.95720419899686 Pearson Correlation: 0.2652922331797278 Spearman Correlation: 0.2942804773126847 Coefficient of Determination: 0.0614257258099673 RMSE: 0.21642240410627353 NRMSE: 0.19525835139822043 MAPE: 112.22529313241331 Predictor: RandomForests Pearson Correlation: 0.3697002386602205 Spearman Correlation: 0.3702285475555668 Coefficient of Determination: 0.13532228695214488 RMSE: 0.18947969027848924 NRMSE: 0.13293462022119973 MAPE: 428.8692666441503 Pearson Correlation: 0.33392383751857757 Spearman Correlation: 0.2896321859679133 Coefficient of Determination: 0.1080813307623334 RMSE: 0.21097476953916952 NRMSE: 0.190343443678822 MAPE: 147.6576392773054 Protein: PTEN x_train_column_count: 2 x_train columns: ['PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 0.41047879730320047 Spearman Correlation: 0.4294724284369952 Coefficient of Determination: 0.16849284303548206 RMSE: 0.5188792564179012 NRMSE: 0.08113192970336974 MAPE: 331.4472207113483 Pearson Correlation: 0.41078511564924747 Spearman Correlation: 0.4342123966633 Coefficient of Determination: 0.16313502873870156 RMSE: 0.660217650275519 NRMSE: 0.12771155413871849 MAPE: 278.94188736048403 Predictor: ElasticNet Pearson Correlation: 0.3985404692517901 Spearman Correlation: 0.42689002966048095 Coefficient of Determination: 0.15543362909884695 RMSE: 0.5229380046661912 NRMSE: 0.08176655533831463 MAPE: 304.42605036273756 Pearson Correlation: 0.4179415330531012 Spearman Correlation: 0.4281025947954464 Coefficient of Determination: 0.16371337701127286 RMSE: 0.6599894762306557 NRMSE: 0.1276674164791581 MAPE: 257.07625884169465 Predictor: RandomForests Pearson Correlation: 0.4466690553755365 Spearman Correlation: 0.4428356386057776 Coefficient of Determination: 0.19585657736412887 RMSE: 0.5102700403029308 NRMSE: 0.07978579318316484 MAPE: 452.43953537742954 Pearson Correlation: 0.4051842265932541 Spearman Correlation: 0.42716816404129 Coefficient of Determination: 0.15737519783928322 RMSE: 0.6624857707957034 NRMSE: 0.1281502961149225 MAPE: 396.73535886051974 Protein: BRCA2 x_train_column_count: 2 x_train columns: ['BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.04258162893050466 Spearman Correlation: 0.042700362873653835 Coefficient of Determination: 0.0018131951223752107 RMSE: 0.20028637440070748 NRMSE: 0.12902971454386053 MAPE: 117.46994060512206 Pearson Correlation: -0.056442203990994026 Spearman Correlation: -0.03929974189204354 Coefficient of Determination: -0.10808195556882616 RMSE: 0.1748328480970483 NRMSE: 0.2286442792088515 MAPE: 113.30018821972733 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: RandomForests Pearson Correlation: 0.28083441731695136 Spearman Correlation: 0.22517775526251882 Coefficient of Determination: 0.041887983610824686 RMSE: 0.19622468301996276 NRMSE: 0.12641306685132084 MAPE: 123.80869397941534 Pearson Correlation: -0.0826894351690544 Spearman Correlation: -0.0055284252872204115 Coefficient of Determination: -0.11650690740137781 RMSE: 0.17549623274850445 NRMSE: 0.22951184561368526 MAPE: 122.17219062749409 Protein: CDKN2A x_train_column_count: 2 x_train columns: ['CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 0.5624274536735128 Spearman Correlation: 0.5457610564847619 Coefficient of Determination: 0.31632464064567134 RMSE: 0.5619972943401821 NRMSE: 0.14310745698866392 MAPE: 132.7739544095685 Pearson Correlation: 0.31075863610910975 Spearman Correlation: 0.30899387772914877 Coefficient of Determination: -0.038336376712090336 RMSE: 0.6174551979095126 NRMSE: 0.15536981905576425 MAPE: 273.2245382084838 Predictor: ElasticNet Pearson Correlation: 0.5622615976105251 Spearman Correlation: 0.543492990453 Coefficient of Determination: 0.3124045594789232 RMSE: 0.5636061910072524 NRMSE: 0.1435171477699199 MAPE: 146.77516383719777 Pearson Correlation: 0.3125409359562636 Spearman Correlation: 0.30912355515654816 Coefficient of Determination: 0.012731701086985403 RMSE: 0.6020797386144108 NRMSE: 0.15150090300053112 MAPE: 235.0605076901894 Predictor: RandomForests Pearson Correlation: 0.6804985222571751 Spearman Correlation: 0.5578792484186119 Coefficient of Determination: 0.4625852388380224 RMSE: 0.4982692159571973 NRMSE: 0.12687968627159923 MAPE: 263.8935646704191 Pearson Correlation: 0.3800441671847586 Spearman Correlation: 0.31043525603050665 Coefficient of Determination: -0.060342568086227955 RMSE: 0.6239639730831126 NRMSE: 0.15700761759470386 MAPE: 482.2917517452506 Protein: TP53 x_train_column_count: 2 x_train columns: ['TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.49617263785200455 Spearman Correlation: 0.422330008616601 Coefficient of Determination: 0.24618728655301647 RMSE: 0.3679471476677106 NRMSE: 0.0935799861816706 MAPE: 859.2353578766179 Pearson Correlation: 0.49535129436748493 Spearman Correlation: 0.4048504345440717 Coefficient of Determination: 0.22896449037527766 RMSE: 0.46375757088630953 NRMSE: 0.12421523259309215 MAPE: 201.1391628651781 Predictor: ElasticNet Pearson Correlation: 0.48992072895322186 Spearman Correlation: 0.4120379423280712 Coefficient of Determination: 0.2256082210125111 RMSE: 0.37293580269764687 NRMSE: 0.0948487506543012 MAPE: 721.2572376164962 Pearson Correlation: 0.48958827792678145 Spearman Correlation: 0.40131423085075874 Coefficient of Determination: 0.19555524845070082 RMSE: 0.4736984176454241 NRMSE: 0.12687784053714318 MAPE: 176.45249849759534 Predictor: RandomForests Pearson Correlation: 0.5521256103058233 Spearman Correlation: 0.47180378890603203 Coefficient of Determination: 0.2972112301119625 RMSE: 0.3552762026792161 NRMSE: 0.09035738515201712 MAPE: 775.3845060972717 Pearson Correlation: 0.5465054322677453 Spearman Correlation: 0.44806802433589593 Coefficient of Determination: 0.27120395577791856 RMSE: 0.45087569635488056 NRMSE: 0.12076488451985552 MAPE: 196.2282167443031 Protein: CTNNB1 x_train_column_count: 2 x_train columns: ['CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.05183983941471332 Spearman Correlation: 0.07847807921027664 Coefficient of Determination: 0.002687368950543112 RMSE: 0.7549643112450443 NRMSE: 0.14849809426535096 MAPE: 681.6283540032656 Pearson Correlation: 0.16859534211479751 Spearman Correlation: 0.23237945610294397 Coefficient of Determination: 0.01567997666776466 RMSE: 0.6723239116067103 NRMSE: 0.21532348989290584 MAPE: 272.74988670933783 Predictor: ElasticNet Pearson Correlation: 0.05182717372175692 Spearman Correlation: 0.07808903558350536 Coefficient of Determination: 0.0024178571399613435 RMSE: 0.7550663143920597 NRMSE: 0.1485181578269197 MAPE: 688.5435887068597 Pearson Correlation: 0.1685953421147975 Spearman Correlation: 0.23237945610294397 Coefficient of Determination: 0.011409098294075548 RMSE: 0.6737809101549757 NRMSE: 0.21579011915711221 MAPE: 271.7943097824159 Predictor: RandomForests Pearson Correlation: 0.2709132651209278 Spearman Correlation: 0.26370850559812414 Coefficient of Determination: 0.053288494500083106 RMSE: 0.7355625165488577 NRMSE: 0.14468184825902003 MAPE: 720.5866044879414 Pearson Correlation: 0.21966619098758056 Spearman Correlation: 0.2606286481137723 Coefficient of Determination: 0.03927354356881829 RMSE: 0.6642174375171072 NRMSE: 0.212727249804511 MAPE: 272.48748832271815 Protein: CCNE1 x_train_column_count: 2 x_train columns: ['CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.7386144499663949 Spearman Correlation: 0.7133623941506215 Coefficient of Determination: 0.54555130569916 RMSE: 0.3025440331935519 NRMSE: 0.10776279009565516 MAPE: 69.0319524869495 Pearson Correlation: 0.7813741840172372 Spearman Correlation: 0.719053853539321 Coefficient of Determination: 0.2511630435543255 RMSE: 0.5608323339417693 NRMSE: 0.1353457861191132 MAPE: 91.4217262803943 Predictor: ElasticNet Pearson Correlation: 0.7385943192541282 Spearman Correlation: 0.7126097756485593 Coefficient of Determination: 0.5224199772167151 RMSE: 0.3101481808065943 NRMSE: 0.11047130215729092 MAPE: 74.62358650338751 Pearson Correlation: 0.7813741840172373 Spearman Correlation: 0.719053853539321 Coefficient of Determination: 0.5100047894439756 RMSE: 0.4536650544034919 NRMSE: 0.10948308381482538 MAPE: 93.60470897731477 Predictor: RandomForests Pearson Correlation: 0.8556441900853572 Spearman Correlation: 0.7114927920105991 Coefficient of Determination: 0.7307222498598404 RMSE: 0.23288761708519015 NRMSE: 0.08295195621912382 MAPE: 56.512948131727114 Pearson Correlation: 0.8005340807679645 Spearman Correlation: 0.7307358786224182 Coefficient of Determination: 0.6136504949478718 RMSE: 0.4028372194679773 NRMSE: 0.09721679162776681 MAPE: 78.43246041847577 Protein: CCND1 x_train_column_count: 2 x_train columns: ['CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.4170395088721106 Spearman Correlation: 0.4316396213226719 Coefficient of Determination: 0.17392195196029125 RMSE: 0.20688004904562254 NRMSE: 0.13030336657615044 MAPE: 582.8211463851483 Pearson Correlation: 0.358992718576449 Spearman Correlation: 0.2762503273108144 Coefficient of Determination: 0.12651562367455815 RMSE: 0.2579122947086627 NRMSE: 0.16477702476882655 MAPE: 243.2604449942109 Predictor: ElasticNet Pearson Correlation: 0.4145177286037175 Spearman Correlation: 0.42726285187649277 Coefficient of Determination: 0.16633345117160447 RMSE: 0.2078280953695484 NRMSE: 0.1309004934051877 MAPE: 602.8530011397819 Pearson Correlation: 0.358992718576449 Spearman Correlation: 0.2762503273108144 Coefficient of Determination: 0.11962893615373504 RMSE: 0.25892700904073 NRMSE: 0.16542531340049962 MAPE: 247.93905572867408 Predictor: RandomForests Pearson Correlation: 0.491338635402475 Spearman Correlation: 0.4512173853537595 Coefficient of Determination: 0.23817352746790288 RMSE: 0.19867174193036233 NRMSE: 0.12513336562176405 MAPE: 544.3909708292624 Pearson Correlation: 0.39141166085500984 Spearman Correlation: 0.2942353603372814 Coefficient of Determination: 0.15022210570379357 RMSE: 0.25438833306784453 NRMSE: 0.16252560858399748 MAPE: 251.6905399030386 Protein: ERBB2 x_train_column_count: 2 x_train columns: ['ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.7777410249677731 Spearman Correlation: 0.6469409697107757 Coefficient of Determination: 0.6048811019179228 RMSE: 0.6461351361477838 NRMSE: 0.11007975469747752 MAPE: 308.27260346052265 Pearson Correlation: 0.6808501187711699 Spearman Correlation: 0.5812566241474333 Coefficient of Determination: 0.4627290572188175 RMSE: 0.6360282769523837 NRMSE: 0.14072978801911357 MAPE: 206.9199510265692 Predictor: ElasticNet Pearson Correlation: 0.7776877249625477 Spearman Correlation: 0.6442627066647334 Coefficient of Determination: 0.6001419146373868 RMSE: 0.6499985655657075 NRMSE: 0.1107379534841146 MAPE: 327.91410907717255 Pearson Correlation: 0.6819514367848014 Spearman Correlation: 0.5872666741480568 Coefficient of Determination: 0.4636712116745767 RMSE: 0.6354703649545989 NRMSE: 0.1406063425057194 MAPE: 224.93544994707904 Predictor: RandomForests Pearson Correlation: 0.838022725420146 Spearman Correlation: 0.6476716327438983 Coefficient of Determination: 0.7007492231903293 RMSE: 0.5623116746672499 NRMSE: 0.09579904844664121 MAPE: 556.9708624977075 Pearson Correlation: 0.7751002688381805 Spearman Correlation: 0.5803322760177033 Coefficient of Determination: 0.5949869104508938 RMSE: 0.552222728245644 NRMSE: 0.12218668619219915 MAPE: 295.855146905497 Protein: ERBB3 x_train_column_count: 2 x_train columns: ['ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.38037588116825766 Spearman Correlation: 0.4068847131242151 Coefficient of Determination: 0.14468581097452848 RMSE: 0.43366315788138476 NRMSE: 0.11703323947606775 MAPE: 213.25911644947954 Pearson Correlation: 0.5205117505086533 Spearman Correlation: 0.5682040923203532 Coefficient of Determination: 0.2312243337879203 RMSE: 0.3655982017755542 NRMSE: 0.17688751997036742 MAPE: 191.6440770818296 Predictor: ElasticNet Pearson Correlation: 0.3773884363248901 Spearman Correlation: 0.41142820549776254 Coefficient of Determination: 0.1400195994958402 RMSE: 0.43484448494169253 NRMSE: 0.11735204574364184 MAPE: 213.86210719531533 Pearson Correlation: 0.5207896565156246 Spearman Correlation: 0.5619845633985462 Coefficient of Determination: 0.21030082931297134 RMSE: 0.37053998343927513 NRMSE: 0.17927850411220758 MAPE: 193.6591646657521 Predictor: RandomForests Pearson Correlation: 0.46250152633420993 Spearman Correlation: 0.42563618973560513 Coefficient of Determination: 0.2129052469927859 RMSE: 0.4160094520573886 NRMSE: 0.11226901096416611 MAPE: 251.67445603380173 Pearson Correlation: 0.545541337658826 Spearman Correlation: 0.5588239281487987 Coefficient of Determination: 0.2690442607444641 RMSE: 0.35649199069533327 NRMSE: 0.1724816583263984 MAPE: 218.38546188635024
Min-Max
scenario = Scenario.selfmRNA_Mutations
normalizeTechnique = NormalizeTechnique.MinMax
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.266811 | 0.102965 | 0.232299 | 0.000000 | 0.0 | 0.00000 | 0.165596 | 0.256402 | 0.0 | 0.00000 | ... | 0.362558 | 0.154626 | 0.343226 | 0.136973 | 0.283236 | 0.203583 | 0.106969 | 0.050188 | 0.019658 | 0.021305 |
| TCGA-A1-A0SH-01 | 0.074647 | 0.046655 | 0.060467 | 0.000000 | 0.0 | 0.00000 | 0.019946 | 0.108076 | 0.0 | 0.00000 | ... | 0.437102 | 0.171136 | 0.196632 | 0.028737 | 0.498917 | 0.208787 | 0.168174 | 0.119445 | 0.172767 | 0.000000 |
| TCGA-A1-A0SJ-01 | 0.122769 | 0.097168 | 0.035285 | 0.088368 | 0.0 | 0.00000 | 0.020200 | 0.129369 | 0.0 | 0.29443 | ... | 0.415293 | 0.914898 | 0.215818 | 0.074090 | 0.379839 | 0.104565 | 0.110857 | 0.079787 | 0.016343 | 0.000000 |
| TCGA-A1-A0SK-01 | 0.716855 | 1.000000 | 0.116251 | 0.076144 | 0.0 | 0.01449 | 0.000000 | 0.094313 | 0.0 | 0.00000 | ... | 0.334733 | 0.181185 | 0.763246 | 0.229344 | 0.511470 | 0.000000 | 0.246798 | 0.166438 | 0.018601 | 0.000000 |
| TCGA-A1-A0SQ-01 | 0.025757 | 0.011574 | 0.044865 | 0.000000 | 0.0 | 0.00000 | 0.022276 | 0.153652 | 0.0 | 0.00000 | ... | 0.537294 | 0.183640 | 0.239462 | 0.036770 | 0.323545 | 0.099038 | 0.071604 | 0.075950 | 0.006561 | 0.000000 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 2 x_train columns: ['RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.1952715284277889 Spearman Correlation: 0.2596678142795193 Coefficient of Determination: 0.038130969814524684 RMSE: 0.2197877955294061 NRMSE: 0.08323718823306422 MAPE: 187.67141163742264 Pearson Correlation: 0.27962798152870116 Spearman Correlation: 0.34967808018729885 Coefficient of Determination: 0.021823743704235343 RMSE: 0.27738895709917644 NRMSE: 0.13703430790926743 MAPE: 130.4372675127902 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: RandomForests Pearson Correlation: 0.3383152856508986 Spearman Correlation: 0.3393842592916632 Coefficient of Determination: 0.09803238411505888 RMSE: 0.21283403305296428 NRMSE: 0.08060368606436821 MAPE: 145.4194861494385 Pearson Correlation: 0.27052230404535893 Spearman Correlation: 0.3280678885109722 Coefficient of Determination: 0.025909129675039777 RMSE: 0.27680908886038547 NRMSE: 0.13674784429654013 MAPE: 107.55264771623115 Protein: CDH1 x_train_column_count: 2 x_train columns: ['CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 0.6279558973899951 Spearman Correlation: 0.5626465965121538 Coefficient of Determination: 0.39432860906687417 RMSE: 0.8782006040980864 NRMSE: 0.14761410655002882 MAPE: 484.09927176004015 Pearson Correlation: 0.6734443624132092 Spearman Correlation: 0.6512632913862063 Coefficient of Determination: 0.45274753665740086 RMSE: 0.8583534228745239 NRMSE: 0.13902261392156456 MAPE: 259.4086165644446 Predictor: ElasticNet Pearson Correlation: 0.5822675918033712 Spearman Correlation: 0.5626465965121538 Coefficient of Determination: 0.2507278009272744 RMSE: 0.9767760690685092 NRMSE: 0.16418336091111715 MAPE: 394.1906160329532 Pearson Correlation: 0.6438368903587984 Spearman Correlation: 0.6512632913862063 Coefficient of Determination: 0.2936217040695215 RMSE: 0.9751938507847727 NRMSE: 0.15794659239816863 MAPE: 235.90437118456555 Predictor: RandomForests Pearson Correlation: 0.7167132530882677 Spearman Correlation: 0.5788660777443754 Coefficient of Determination: 0.5131766821713584 RMSE: 0.787337410243528 NRMSE: 0.1323411847181228 MAPE: 307.9025522067983 Pearson Correlation: 0.7415010523499842 Spearman Correlation: 0.6553520846612731 Coefficient of Determination: 0.5467665669927284 RMSE: 0.781147864684134 NRMSE: 0.12651806949631272 MAPE: 152.89909095904093 Protein: CDH2 x_train_column_count: 2 x_train columns: ['CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.15002477351668803 Spearman Correlation: 0.021027718948557195 Coefficient of Determination: 0.02250743266873345 RMSE: 0.366993371962299 NRMSE: 0.1355784991382294 MAPE: 373.6787655351267 Pearson Correlation: 0.10564670001853974 Spearman Correlation: 0.11871524729294705 Coefficient of Determination: 0.008640461878668515 RMSE: 0.3734908911193236 NRMSE: 0.19274959545818424 MAPE: 104.18723456874639 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: RandomForests Pearson Correlation: 0.19331701961991646 Spearman Correlation: 0.1288920303560814 Coefficient of Determination: 0.03662847645748135 RMSE: 0.36433290051662137 NRMSE: 0.1345956401735663 MAPE: 517.4362375376886 Pearson Correlation: 0.044230558158288136 Spearman Correlation: -0.05978684567685635 Coefficient of Determination: -0.006409334490806495 RMSE: 0.3763151890353155 NRMSE: 0.19420714715142465 MAPE: 98.36754929438122 Protein: CDH3 x_train_column_count: 2 x_train columns: ['CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.24852272791737326 Spearman Correlation: 0.30478529422494005 Coefficient of Determination: 0.06176354629149272 RMSE: 0.20224890215241426 NRMSE: 0.14189320743700837 MAPE: 292.39454632267496 Pearson Correlation: 0.4229275133140767 Spearman Correlation: 0.4640717978733782 Coefficient of Determination: 0.16215276852659732 RMSE: 0.18725963044582647 NRMSE: 0.14332812641757542 MAPE: 197.9811113353207 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: RandomForests Pearson Correlation: 0.3496682668189332 Spearman Correlation: 0.3307097672586625 Coefficient of Determination: 0.12015906260707776 RMSE: 0.19585384588255172 NRMSE: 0.13740658211437934 MAPE: 381.1612404025097 Pearson Correlation: 0.4456557812474688 Spearman Correlation: 0.4605862331967038 Coefficient of Determination: 0.17847992914693533 RMSE: 0.1854260861696705 NRMSE: 0.14192473549354423 MAPE: 326.56281030401266 Protein: PTEN x_train_column_count: 2 x_train columns: ['PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 0.41887910343528845 Spearman Correlation: 0.44078066604527977 Coefficient of Determination: 0.17545970329475102 RMSE: 0.5688648238965365 NRMSE: 0.08894767006434781 MAPE: 396.8026475986217 Pearson Correlation: 0.35731102299960693 Spearman Correlation: 0.4041020388254805 Coefficient of Determination: 0.11499556078292583 RMSE: 0.46723724288756274 NRMSE: 0.15399025868023292 MAPE: 165.92352360717715 Predictor: ElasticNet Pearson Correlation: 0.36158770207672913 Spearman Correlation: 0.4400193793343514 Coefficient of Determination: 0.036460337826189404 RMSE: 0.6149473512667288 NRMSE: 0.09615313130587583 MAPE: 330.5283782759996 Pearson Correlation: 0.22243017983760174 Spearman Correlation: 0.38824992683640625 Coefficient of Determination: 0.015123135231957074 RMSE: 0.4928964563896645 NRMSE: 0.16244692386449952 MAPE: 161.54548753591865 Predictor: RandomForests Pearson Correlation: 0.45236902822468755 Spearman Correlation: 0.4487524954963713 Coefficient of Determination: 0.20039971076781782 RMSE: 0.5601954903785883 NRMSE: 0.08759213359058529 MAPE: 516.2173301723134 Pearson Correlation: 0.38441368455050445 Spearman Correlation: 0.39593710625776624 Coefficient of Determination: 0.13716782199510313 RMSE: 0.46134720570689036 NRMSE: 0.15204904281421472 MAPE: 200.88083641732086 Protein: BRCA2 x_train_column_count: 2 x_train columns: ['BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.008428022315691461 Spearman Correlation: -0.005159182575289313 Coefficient of Determination: 7.103156015364487e-05 RMSE: 0.19760420841075446 NRMSE: 0.12782801056418722 MAPE: 122.20696074669006 Pearson Correlation: -0.07297127632150102 Spearman Correlation: -0.08797201245252427 Coefficient of Determination: -0.0064731867761484985 RMSE: 0.1853316133792551 NRMSE: 0.18547999737715687 MAPE: 103.9139384990902 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: RandomForests Pearson Correlation: 0.3264054509821304 Spearman Correlation: 0.25514821736101123 Coefficient of Determination: 0.04915822129348457 RMSE: 0.19269291308570505 NRMSE: 0.1246509471010991 MAPE: 134.13410266570628 Pearson Correlation: -0.04146970603920158 Spearman Correlation: -0.016131654893247544 Coefficient of Determination: -0.022246853818178813 RMSE: 0.18677824613802824 NRMSE: 0.18692778836872323 MAPE: 115.02861537614206 Protein: CDKN2A x_train_column_count: 2 x_train columns: ['CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 0.4802999068423231 Spearman Correlation: 0.48708475403799584 Coefficient of Determination: 0.23068800051274407 RMSE: 0.5637278766322544 NRMSE: 0.12743933008528413 MAPE: 152.2218946618392 Pearson Correlation: 0.5965712816312629 Spearman Correlation: 0.5412203687445128 Coefficient of Determination: 0.35132796117392295 RMSE: 0.6015263279382246 NRMSE: 0.16244297270813518 MAPE: 148.0673527679771 Predictor: ElasticNet Pearson Correlation: 0.48027814349293335 Spearman Correlation: 0.4872043250292133 Coefficient of Determination: 0.02562860399756539 RMSE: 0.6344253402682721 NRMSE: 0.1434215757360172 MAPE: 204.27961647628345 Pearson Correlation: 0.5965712816312632 Spearman Correlation: 0.5412203687445128 Coefficient of Determination: 0.026287142913119288 RMSE: 0.7369830572439918 NRMSE: 0.19902323987145337 MAPE: 422.40510313866633 Predictor: RandomForests Pearson Correlation: 0.6031166548470466 Spearman Correlation: 0.5142043852276713 Coefficient of Determination: 0.36338257195258583 RMSE: 0.5128112215701984 NRMSE: 0.11592883950948307 MAPE: 222.42155552398435 Pearson Correlation: 0.6736173012257093 Spearman Correlation: 0.5183481629817652 Coefficient of Determination: 0.4416816519711879 RMSE: 0.5580627074004604 NRMSE: 0.15070556505548485 MAPE: 518.4052407636528 Protein: TP53 x_train_column_count: 2 x_train columns: ['TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.48936689486328205 Spearman Correlation: 0.38957054234181804 Coefficient of Determination: 0.23947995778813047 RMSE: 0.3948939862283756 NRMSE: 0.09490362562566106 MAPE: 795.0838550971346 Pearson Correlation: 0.503455149832974 Spearman Correlation: 0.4709930738464541 Coefficient of Determination: 0.24730289040861475 RMSE: 0.36493725588546444 NRMSE: 0.1312299097002641 MAPE: 596.0863107159807 Predictor: ElasticNet Pearson Correlation: 0.39909793557962253 Spearman Correlation: 0.3885884406197226 Coefficient of Determination: 0.12535616123398052 RMSE: 0.42348770760810817 NRMSE: 0.10177546445760832 MAPE: 537.1921154489185 Pearson Correlation: 0.5023542925215839 Spearman Correlation: 0.4888401131596918 Coefficient of Determination: 0.18049958760263807 RMSE: 0.38078748480330077 NRMSE: 0.1369295856748897 MAPE: 567.4667962543093 Predictor: RandomForests Pearson Correlation: 0.5510002233027409 Spearman Correlation: 0.4233688188011204 Coefficient of Determination: 0.2954069900795824 RMSE: 0.3800969225428784 NRMSE: 0.09134749400213373 MAPE: 699.0310629901686 Pearson Correlation: 0.5124254978006286 Spearman Correlation: 0.5046523359322292 Coefficient of Determination: 0.2612377223025778 RMSE: 0.36154339655957785 NRMSE: 0.13000949209233625 MAPE: 378.7330812455238 Protein: CTNNB1 x_train_column_count: 2 x_train columns: ['CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 0.08898105342822928 Spearman Correlation: 0.14590811000321963 Coefficient of Determination: 0.007917627869197252 RMSE: 0.7343107892164392 NRMSE: 0.14799580571506527 MAPE: 635.7829662685035 Pearson Correlation: -0.0024019468238156904 Spearman Correlation: -0.034040581406692035 Coefficient of Determination: -0.022319441458223288 RMSE: 0.7592919987705886 NRMSE: 0.1883818783234726 MAPE: 284.0557468282035 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: RandomForests Pearson Correlation: 0.3101921197195444 Spearman Correlation: 0.30218639412689285 Coefficient of Determination: 0.08112196149899753 RMSE: 0.7066998169279368 NRMSE: 0.14243098472860852 MAPE: 629.3479296651823 Pearson Correlation: -0.06030718098076416 Spearman Correlation: -0.04014575748895606 Coefficient of Determination: -0.07580801753149946 RMSE: 0.7789021484733238 NRMSE: 0.19324719606840765 MAPE: 401.6201927378137 Protein: CCNE1 x_train_column_count: 2 x_train columns: ['CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.7219448352970321 Spearman Correlation: 0.7137588590927915 Coefficient of Determination: 0.5212043452120587 RMSE: 0.33467655726409257 NRMSE: 0.0807675645592327 MAPE: 91.9557432422028 Pearson Correlation: 0.7713064884061224 Spearman Correlation: 0.7106623744024974 Coefficient of Determination: 0.5218328477320503 RMSE: 0.3713611938248207 NRMSE: 0.13227469058764763 MAPE: 54.38453894319897 Predictor: ElasticNet Pearson Correlation: 0.7219395993512734 Spearman Correlation: 0.7131090453751777 Coefficient of Determination: 0.03077080050273706 RMSE: 0.4761715428585635 NRMSE: 0.11491457944797247 MAPE: 119.01705479011031 Pearson Correlation: 0.7713064884061224 Spearman Correlation: 0.7106623744024974 Coefficient of Determination: 0.014782217751995619 RMSE: 0.533055919788934 NRMSE: 0.18986853776987853 MAPE: 84.17448812626547 Predictor: RandomForests Pearson Correlation: 0.8562861508639215 Spearman Correlation: 0.7204360697849619 Coefficient of Determination: 0.7279163800285591 RMSE: 0.25229078682087813 NRMSE: 0.06088538910173954 MAPE: 54.30365639848357 Pearson Correlation: 0.8350602153703399 Spearman Correlation: 0.7068832036023305 Coefficient of Determination: 0.6949121277125943 RMSE: 0.29663276628948443 NRMSE: 0.10565726314852517 MAPE: 44.991407020009255 Protein: CCND1 x_train_column_count: 2 x_train columns: ['CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 0.4040680875024818 Spearman Correlation: 0.37768748734328855 Coefficient of Determination: 0.1632710193379131 RMSE: 0.21852325442478654 NRMSE: 0.13136986114438118 MAPE: 345.99314721459893 Pearson Correlation: 0.472225253956946 Spearman Correlation: 0.4734221051604722 Coefficient of Determination: 0.0839977628278058 RMSE: 0.22486339456981952 NRMSE: 0.1601499875860489 MAPE: 1093.634695043635 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: RandomForests Pearson Correlation: 0.4678371375434505 Spearman Correlation: 0.4000144577763212 Coefficient of Determination: 0.21263881710072907 RMSE: 0.21197871451568037 NRMSE: 0.12743547301083333 MAPE: 313.8994682707794 Pearson Correlation: 0.5051577497307473 Spearman Correlation: 0.4767786498993165 Coefficient of Determination: 0.2533320194705554 RMSE: 0.20301786639906733 NRMSE: 0.14459138111722075 MAPE: 1138.045040698996 Protein: ERBB2 x_train_column_count: 2 x_train columns: ['ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 0.7659173929830422 Spearman Correlation: 0.6116397286443633 Coefficient of Determination: 0.5866294528739393 RMSE: 0.6552429682383681 NRMSE: 0.11163142379310155 MAPE: 324.58040198328655 Pearson Correlation: 0.7602365413428475 Spearman Correlation: 0.7022827041264268 Coefficient of Determination: 0.5613254676670082 RMSE: 0.6007556763198301 NRMSE: 0.11139545268307623 MAPE: 284.30368087487426 Predictor: ElasticNet Pearson Correlation: 0.7657610435301817 Spearman Correlation: 0.6137508967340191 Coefficient of Determination: 0.14044650489331145 RMSE: 0.9448634714935858 NRMSE: 0.16097304316976777 MAPE: 582.6141905097294 Pearson Correlation: 0.7627625013199515 Spearman Correlation: 0.7166081357916302 Coefficient of Determination: 0.10192450101394424 RMSE: 0.8595736547415044 NRMSE: 0.1593869191065278 MAPE: 499.74610932649836 Predictor: RandomForests Pearson Correlation: 0.8350447059162798 Spearman Correlation: 0.6216515632506531 Coefficient of Determination: 0.6965509892505153 RMSE: 0.5614039541274837 NRMSE: 0.09564440331319891 MAPE: 467.4276979149923 Pearson Correlation: 0.8040149199599619 Spearman Correlation: 0.712575091635544 Coefficient of Determination: 0.6363330370305993 RMSE: 0.5469890053467115 NRMSE: 0.1014257380579847 MAPE: 341.9689748270015 Protein: ERBB3 x_train_column_count: 2 x_train columns: ['ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.4062482641373843 Spearman Correlation: 0.4427133471412132 Coefficient of Determination: 0.16503765211463794 RMSE: 0.41954331383050747 NRMSE: 0.11322269882916539 MAPE: 202.28699368456594 Pearson Correlation: 0.40862919878165166 Spearman Correlation: 0.45536588548210316 Coefficient of Determination: 0.1635740509453627 RMSE: 0.42574664485715835 NRMSE: 0.17083439460434255 MAPE: 197.90446820754485 Predictor: ElasticNet Pearson Correlation: 0.4002107913871715 Spearman Correlation: 0.4461608353851102 Coefficient of Determination: 0.04383943877554741 RMSE: 0.4489611601225439 NRMSE: 0.12116173120347591 MAPE: 212.3440091888109 Pearson Correlation: 0.4241326159508129 Spearman Correlation: 0.47324952839944506 Coefficient of Determination: 0.041458769712843124 RMSE: 0.45576700800318737 NRMSE: 0.18288031587184905 MAPE: 243.54596984138192 Predictor: RandomForests Pearson Correlation: 0.488999182581015 Spearman Correlation: 0.4625532488300241 Coefficient of Determination: 0.23752045294377655 RMSE: 0.40091975626486726 NRMSE: 0.10819673516851229 MAPE: 242.43941073526028 Pearson Correlation: 0.43051383879067884 Spearman Correlation: 0.4715525332197415 Coefficient of Determination: 0.17662898932460092 RMSE: 0.42241105081251895 NRMSE: 0.16949595965448402 MAPE: 271.39177387721145 Fold: 2 Protein: RB1 x_train_column_count: 2 x_train columns: ['RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.2511572694075361 Spearman Correlation: 0.31907158047894724 Coefficient of Determination: 0.06307997397624976 RMSE: 0.22750719811233844 NRMSE: 0.08320187174968492 MAPE: 201.25627265479443 Pearson Correlation: 0.04839347810914267 Spearman Correlation: 0.10395083406496927 Coefficient of Determination: -0.05140540688639472 RMSE: 0.25111985237096757 NRMSE: 0.14387359625245932 MAPE: 325.8936558409008 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: RandomForests Pearson Correlation: 0.3561481274847229 Spearman Correlation: 0.4067656823580468 Coefficient of Determination: 0.11704931686327302 RMSE: 0.22085747588364613 NRMSE: 0.08076999556891681 MAPE: 212.91843709848627 Pearson Correlation: 0.11218713523215126 Spearman Correlation: 0.13196685330144695 Coefficient of Determination: -0.018378086466819266 RMSE: 0.24714422519366094 NRMSE: 0.14159584810169526 MAPE: 371.2808731876731 Protein: CDH1 x_train_column_count: 2 x_train columns: ['CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.6315052198313875 Spearman Correlation: 0.5446486441750252 Coefficient of Determination: 0.3987988426742892 RMSE: 0.8688793749984193 NRMSE: 0.13938868613113328 MAPE: 415.31916013911666 Pearson Correlation: 0.6431590335933617 Spearman Correlation: 0.6870841869085944 Coefficient of Determination: 0.38536419609566075 RMSE: 0.9020711996260492 NRMSE: 0.1601973361083376 MAPE: 254.18308591244045 Predictor: ElasticNet Pearson Correlation: 0.5970202168365195 Spearman Correlation: 0.5446486441750252 Coefficient of Determination: 0.2564949140376309 RMSE: 0.9662545592827815 NRMSE: 0.1550099557684738 MAPE: 341.78878394363704 Pearson Correlation: 0.5748313288463929 Spearman Correlation: 0.6870841869085944 Coefficient of Determination: 0.22488592465729051 RMSE: 1.013012259834295 NRMSE: 0.17989917596062777 MAPE: 181.13516243451264 Predictor: RandomForests Pearson Correlation: 0.7366071809739936 Spearman Correlation: 0.5636673055499254 Coefficient of Determination: 0.5422574030959135 RMSE: 0.7581589198918414 NRMSE: 0.12162652119865908 MAPE: 214.97063545629814 Pearson Correlation: 0.6551607825586359 Spearman Correlation: 0.7008146074293089 Coefficient of Determination: 0.39105486201687945 RMSE: 0.8978855313682372 NRMSE: 0.1594540101879306 MAPE: 214.84821008509215 Protein: CDH2 x_train_column_count: 2 x_train columns: ['CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.1470397616820179 Spearman Correlation: 0.035212766431470366 Coefficient of Determination: 0.02162069151550461 RMSE: 0.3640972720820029 NRMSE: 0.1319288615414171 MAPE: 381.47691248370876 Pearson Correlation: 0.11717867760285976 Spearman Correlation: 0.063681592039801 Coefficient of Determination: 0.012875471236388325 RMSE: 0.3845803830082546 NRMSE: 0.2026058693416578 MAPE: 121.62788852850377 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: RandomForests Pearson Correlation: 0.19455280933418412 Spearman Correlation: 0.14521011138581139 Coefficient of Determination: 0.03651059964118086 RMSE: 0.3613160602024537 NRMSE: 0.13092110305183483 MAPE: 424.3360219113005 Pearson Correlation: 0.11830349762100852 Spearman Correlation: 0.0855059428777579 Coefficient of Determination: 0.010769358098726367 RMSE: 0.3849904316896376 NRMSE: 0.20282189250153443 MAPE: 124.97634642871276 Protein: CDH3 x_train_column_count: 2 x_train columns: ['CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.33039940395723194 Spearman Correlation: 0.3546567496876568 Coefficient of Determination: 0.10916376613529422 RMSE: 0.1960421497425445 NRMSE: 0.14754099760112624 MAPE: 270.9861508027028 Pearson Correlation: 0.10870762980468014 Spearman Correlation: 0.25441908106526195 Coefficient of Determination: -0.18081292145862649 RMSE: 0.21507834130770145 NRMSE: 0.17697551329523697 MAPE: 625.0033719921506 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: RandomForests Pearson Correlation: 0.4204408504993642 Spearman Correlation: 0.38155013256774595 Coefficient of Determination: 0.17584235816615323 RMSE: 0.18856264633511197 NRMSE: 0.14191193570937055 MAPE: 407.97875051638437 Pearson Correlation: 0.15295236629097841 Spearman Correlation: 0.25482125674289846 Coefficient of Determination: -0.20407823566708516 RMSE: 0.21718682836391678 NRMSE: 0.17871046520523065 MAPE: 749.9682708776052 Protein: PTEN x_train_column_count: 2 x_train columns: ['PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.42416906563261264 Spearman Correlation: 0.45794433369899473 Coefficient of Determination: 0.1799193962396437 RMSE: 0.5648570650041206 NRMSE: 0.08832101712205778 MAPE: 328.3921540425159 Pearson Correlation: 0.38024655569171983 Spearman Correlation: 0.34407374890254616 Coefficient of Determination: 0.08593951642891196 RMSE: 0.4891517474355463 NRMSE: 0.16405679750320173 MAPE: 643.5112425804158 Predictor: ElasticNet Pearson Correlation: 0.39489736005761794 Spearman Correlation: 0.4532017127711115 Coefficient of Determination: 0.02895744784896981 RMSE: 0.6146521792828362 NRMSE: 0.09610697823201254 MAPE: 245.03138226845795 Pearson Correlation: 0.3629258522537863 Spearman Correlation: 0.3435518486001366 Coefficient of Determination: 0.03928990710007019 RMSE: 0.501478500920502 NRMSE: 0.1681910722164281 MAPE: 420.514895786146 Predictor: RandomForests Pearson Correlation: 0.466726010178586 Spearman Correlation: 0.4753913774615105 Coefficient of Determination: 0.21373240225643642 RMSE: 0.5530895898238344 NRMSE: 0.08648105540205368 MAPE: 368.0070173577029 Pearson Correlation: 0.3314358838524452 Spearman Correlation: 0.3269356128219667 Coefficient of Determination: 0.06792532786637973 RMSE: 0.4939483007008637 NRMSE: 0.1656655153947088 MAPE: 785.4197352552937 Protein: BRCA2 x_train_column_count: 2 x_train columns: ['BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.04243682806869936 Spearman Correlation: 0.06477237688313686 Coefficient of Determination: 0.0018008843765322524 RMSE: 0.19514843785952132 NRMSE: 0.12571972160381467 MAPE: 117.14613128531484 Pearson Correlation: -0.08928340042852548 Spearman Correlation: -0.1638669398107502 Coefficient of Determination: -0.02766272476565801 RMSE: 0.19584157678029548 NRMSE: 0.1325645433182129 MAPE: 118.46378786857773 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: RandomForests Pearson Correlation: 0.3077670968857318 Spearman Correlation: 0.2559471197183224 Coefficient of Determination: 0.04418964240867662 RMSE: 0.19095997756970787 NRMSE: 0.12302140606842189 MAPE: 126.66158716885236 Pearson Correlation: 0.07485828109476582 Spearman Correlation: 0.04821987727977225 Coefficient of Determination: -0.011707684095326076 RMSE: 0.19431535453633306 NRMSE: 0.13153144831306007 MAPE: 123.3513058769194 Protein: CDKN2A x_train_column_count: 2 x_train columns: ['CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.504065773151957 Spearman Correlation: 0.47627697631549 Coefficient of Determination: 0.25408230366328044 RMSE: 0.5729080406613378 NRMSE: 0.1295146469224229 MAPE: 150.5818448064124 Pearson Correlation: 0.5570318023649256 Spearman Correlation: 0.57380255584821 Coefficient of Determination: 0.28957905519661165 RMSE: 0.567612340337855 NRMSE: 0.15334243039168333 MAPE: 174.70588681647797 Predictor: ElasticNet Pearson Correlation: 0.5036612591893176 Spearman Correlation: 0.4759909513511134 Coefficient of Determination: 0.03645107056921948 RMSE: 0.6511429591282857 NRMSE: 0.14720084980858722 MAPE: 281.0400850769281 Pearson Correlation: 0.562783406547642 Spearman Correlation: 0.5756072578285046 Coefficient of Determination: 0.029195285258933223 RMSE: 0.6635289694095704 NRMSE: 0.1792546383751811 MAPE: 239.94265975013613 Predictor: RandomForests Pearson Correlation: 0.6040027516191304 Spearman Correlation: 0.4861296560239233 Coefficient of Determination: 0.36433447381499207 RMSE: 0.528875917565927 NRMSE: 0.11956051035739278 MAPE: 257.31980271784846 Pearson Correlation: 0.6768078158008014 Spearman Correlation: 0.569489990183919 Coefficient of Determination: 0.44303391666723235 RMSE: 0.5025836141073503 NRMSE: 0.13577469583621957 MAPE: 209.43106914074932 Protein: TP53 x_train_column_count: 2 x_train columns: ['TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 0.48818016483087473 Spearman Correlation: 0.4181118202259834 Coefficient of Determination: 0.23831987333430005 RMSE: 0.397379306635346 NRMSE: 0.10643613409276712 MAPE: 384.484307688014 Pearson Correlation: 0.5142418553541327 Spearman Correlation: 0.4044385913569408 Coefficient of Determination: 0.2573818514375176 RMSE: 0.3527874266078587 NRMSE: 0.11618225806285483 MAPE: 2233.0782832262653 Predictor: ElasticNet Pearson Correlation: 0.41407774446365936 Spearman Correlation: 0.42181987707319435 Coefficient of Determination: 0.141478704213303 RMSE: 0.4218853761592253 NRMSE: 0.11299996682984473 MAPE: 330.5996468489922 Pearson Correlation: 0.3681152329639372 Spearman Correlation: 0.3812554872695347 Coefficient of Determination: 0.1170684373312817 RMSE: 0.3846748916837201 NRMSE: 0.12668364619915037 MAPE: 1583.0208302206152 Predictor: RandomForests Pearson Correlation: 0.5587867995287471 Spearman Correlation: 0.47391112149106396 Coefficient of Determination: 0.30699916357554946 RMSE: 0.37904067333120844 NRMSE: 0.1015242194539195 MAPE: 422.75711316796185 Pearson Correlation: 0.5299315765738543 Spearman Correlation: 0.3714748445602258 Coefficient of Determination: 0.27289143154574313 RMSE: 0.349084005370456 NRMSE: 0.11496262320779053 MAPE: 2141.8730565291485 Protein: CTNNB1 x_train_column_count: 2 x_train columns: ['CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.06653317476644437 Spearman Correlation: 0.1176880432626928 Coefficient of Determination: 0.004426663344502146 RMSE: 0.7233771779417462 NRMSE: 0.1422850468020744 MAPE: 606.7838742154084 Pearson Correlation: 0.13956120176564737 Spearman Correlation: 0.1409813676714467 Coefficient of Determination: -0.11093029862447712 RMSE: 0.8079322447309539 NRMSE: 0.20107320493042832 MAPE: 216.76313143789793 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: RandomForests Pearson Correlation: 0.2846108698980282 Spearman Correlation: 0.29112484755208995 Coefficient of Determination: 0.06903793114490742 RMSE: 0.6995103870594284 NRMSE: 0.13759055606991116 MAPE: 631.5545292503399 Pearson Correlation: 0.0711397534338752 Spearman Correlation: 0.14282184909213674 Coefficient of Determination: -0.1285956971281863 RMSE: 0.8143305550615784 NRMSE: 0.20266557702933685 MAPE: 489.1762361982494 Protein: CCNE1 x_train_column_count: 2 x_train columns: ['CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.729924711609084 Spearman Correlation: 0.7061567494715154 Coefficient of Determination: 0.5327900846176046 RMSE: 0.35051079946653413 NRMSE: 0.08458884558885396 MAPE: 90.83614166716927 Pearson Correlation: 0.7770270702564802 Spearman Correlation: 0.7531411569602966 Coefficient of Determination: 0.46747886325152765 RMSE: 0.30523096808283556 NRMSE: 0.16588729725859142 MAPE: 56.09620217722176 Predictor: ElasticNet Pearson Correlation: 0.7299247116090841 Spearman Correlation: 0.7061567494715154 Coefficient of Determination: 0.03667931381333689 RMSE: 0.5033045088794984 NRMSE: 0.12146258389350059 MAPE: 118.3815866962251 Pearson Correlation: 0.7770270702564799 Spearman Correlation: 0.7531411569602966 Coefficient of Determination: 0.02245204702758996 RMSE: 0.4135511227396713 NRMSE: 0.22475726647409572 MAPE: 81.34737690433269 Predictor: RandomForests Pearson Correlation: 0.8577101219397514 Spearman Correlation: 0.7101695638315398 Coefficient of Determination: 0.7317659742467798 RMSE: 0.26558424714779255 NRMSE: 0.06409350270236565 MAPE: 67.88985778990819 Pearson Correlation: 0.8351430823920907 Spearman Correlation: 0.7370836679134409 Coefficient of Determination: 0.6941548923260417 RMSE: 0.2313188038212206 NRMSE: 0.12571742445405715 MAPE: 40.56267191069466 Protein: CCND1 x_train_column_count: 2 x_train columns: ['CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.4247267168184558 Spearman Correlation: 0.39900607291610307 Coefficient of Determination: 0.18039278397938474 RMSE: 0.2161401081741948 NRMSE: 0.1299371825360972 MAPE: 532.8984814701605 Pearson Correlation: 0.2969521452872802 Spearman Correlation: 0.3886206223783046 Coefficient of Determination: 0.08399442139906799 RMSE: 0.22532540558367184 NRMSE: 0.17432490993352096 MAPE: 348.8366916307707 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: RandomForests Pearson Correlation: 0.5009246505960984 Spearman Correlation: 0.40965593127045014 Coefficient of Determination: 0.2468749440121255 RMSE: 0.20718868121322256 NRMSE: 0.12455584351109315 MAPE: 491.2395482507021 Pearson Correlation: 0.3225095409332167 Spearman Correlation: 0.3839087800361473 Coefficient of Determination: 0.09369217172592081 RMSE: 0.22412947187967547 NRMSE: 0.17339966568644818 MAPE: 339.8668172258049 Protein: ERBB2 x_train_column_count: 2 x_train columns: ['ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.7537853148032354 Spearman Correlation: 0.6558063061456499 Coefficient of Determination: 0.5681923008130128 RMSE: 0.6459554448974096 NRMSE: 0.1159225893970909 MAPE: 208.2828186462034 Pearson Correlation: 0.8100039494045673 Spearman Correlation: 0.500599941469125 Coefficient of Determination: 0.6330601276325525 RMSE: 0.6404058113084755 NRMSE: 0.10910366991643108 MAPE: 800.5737067111248 Predictor: ElasticNet Pearson Correlation: 0.753642335970701 Spearman Correlation: 0.6630955260861322 Coefficient of Determination: 0.1235704048334555 RMSE: 0.9202713245539313 NRMSE: 0.16515107308542815 MAPE: 380.8008514263541 Pearson Correlation: 0.8108498416783884 Spearman Correlation: 0.5166032582187103 Coefficient of Determination: 0.12069548978323963 RMSE: 0.9913510293027509 NRMSE: 0.16889296374648635 MAPE: 1278.4076069657146 Predictor: RandomForests Pearson Correlation: 0.8389294424186139 Spearman Correlation: 0.6674393366047144 Coefficient of Determination: 0.7023030045025691 RMSE: 0.5363454470636926 NRMSE: 0.09625207671225393 MAPE: 280.2953308487788 Pearson Correlation: 0.8161121853257635 Spearman Correlation: 0.5012523821949281 Coefficient of Determination: 0.6428254688684671 RMSE: 0.6318268142679099 NRMSE: 0.10764209657527811 MAPE: 1420.7544425542162 Protein: ERBB3 x_train_column_count: 2 x_train columns: ['ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.41413732939149606 Spearman Correlation: 0.45698503469565566 Coefficient of Determination: 0.17150972759552052 RMSE: 0.40516652442979906 NRMSE: 0.10934281600709196 MAPE: 181.65409597187795 Pearson Correlation: 0.3768403602362148 Spearman Correlation: 0.4409569798068482 Coefficient of Determination: 0.13832976304707267 RMSE: 0.4806312797016178 NRMSE: 0.17738155208043202 MAPE: 302.13924397439155 Predictor: ElasticNet Pearson Correlation: 0.41402025545880744 Spearman Correlation: 0.4574811032948563 Coefficient of Determination: 0.04505311002035017 RMSE: 0.43499018578139437 NRMSE: 0.11739136621842691 MAPE: 209.10771780976933 Pearson Correlation: 0.38212391915057364 Spearman Correlation: 0.4416544727343674 Coefficient of Determination: 0.039804617197458425 RMSE: 0.5073659198963146 NRMSE: 0.18724822570806457 MAPE: 282.6400886562516 Predictor: RandomForests Pearson Correlation: 0.49379269726620445 Spearman Correlation: 0.47011878226411286 Coefficient of Determination: 0.24235048330361064 RMSE: 0.38745745765908807 NRMSE: 0.10456364716462097 MAPE: 216.39720242867088 Pearson Correlation: 0.4332035050690915 Spearman Correlation: 0.44593650227107995 Coefficient of Determination: 0.18582907647625257 RMSE: 0.46719617614868336 NRMSE: 0.1724231991366529 MAPE: 360.2215328744491 Fold: 3 Protein: RB1 x_train_column_count: 2 x_train columns: ['RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.20549008280566836 Spearman Correlation: 0.2819802454315311 Coefficient of Determination: 0.04222617413148044 RMSE: 0.23544695065539922 NRMSE: 0.08610552613202137 MAPE: 195.68258151924312 Pearson Correlation: 0.21409658910713825 Spearman Correlation: 0.27253457025648703 Coefficient of Determination: 0.023470371248125454 RMSE: 0.2190483456261663 NRMSE: 0.1537030366323072 MAPE: 231.77158689364336 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: RandomForests Pearson Correlation: 0.3152095252059186 Spearman Correlation: 0.3523126286923159 Coefficient of Determination: 0.09183937689922117 RMSE: 0.22926772504859663 NRMSE: 0.08384571571408596 MAPE: 273.73383533728446 Pearson Correlation: 0.22969779464652873 Spearman Correlation: 0.2862101810314933 Coefficient of Determination: 0.02523111481047402 RMSE: 0.2188507776442057 NRMSE: 0.1535644060542864 MAPE: 236.05105884005155 Protein: CDH1 x_train_column_count: 2 x_train columns: ['CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.6311913671046155 Spearman Correlation: 0.601949787752189 Coefficient of Determination: 0.3984025419073933 RMSE: 0.9111357255334679 NRMSE: 0.1450806862095901 MAPE: 503.3037368248729 Pearson Correlation: 0.6707478230465697 Spearman Correlation: 0.47213306899088514 Coefficient of Determination: 0.43406320486557703 RMSE: 0.7083088750599962 NRMSE: 0.13924996560767433 MAPE: 251.88462492469492 Predictor: ElasticNet Pearson Correlation: 0.5887737234203038 Spearman Correlation: 0.601949787752189 Coefficient of Determination: 0.2630402990228359 RMSE: 1.0084443784583796 NRMSE: 0.160575201181233 MAPE: 432.43133710191535 Pearson Correlation: 0.653198692346682 Spearman Correlation: 0.47213306899088514 Coefficient of Determination: 0.2783157883361347 RMSE: 0.7998569451327634 NRMSE: 0.1572478561578979 MAPE: 216.75087820501685 Predictor: RandomForests Pearson Correlation: 0.7255341506696129 Spearman Correlation: 0.6201341448080985 Coefficient of Determination: 0.5254743555827937 RMSE: 0.8092075444164823 NRMSE: 0.12885060100259263 MAPE: 278.9395763351217 Pearson Correlation: 0.7393813330136257 Spearman Correlation: 0.4674650763382962 Coefficient of Determination: 0.5442785883914165 RMSE: 0.6356066538055941 NRMSE: 0.12495707423536236 MAPE: 181.9962239203982 Protein: CDH2 x_train_column_count: 2 x_train columns: ['CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.14262397191829065 Spearman Correlation: -0.002487806216282824 Coefficient of Determination: 0.020341597365749253 RMSE: 0.377340550380385 NRMSE: 0.13672749850727772 MAPE: 204.8811447005443 Pearson Correlation: 0.1451886540719864 Spearman Correlation: 0.23133206149702618 Coefficient of Determination: 0.013947150404293174 RMSE: 0.32965523283104453 NRMSE: 0.17369656291812158 MAPE: 675.0963371430473 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: RandomForests Pearson Correlation: 0.23493300907448675 Spearman Correlation: 0.21194477216286742 Coefficient of Determination: 0.04976239614304989 RMSE: 0.3716312713312571 NRMSE: 0.1346587692337333 MAPE: 387.79228301128836 Pearson Correlation: -0.02522530974628973 Spearman Correlation: -0.1851350763201282 Coefficient of Determination: -0.0407518659493773 RMSE: 0.33867526307154056 NRMSE: 0.17844925025372552 MAPE: 642.4010366244271 Protein: CDH3 x_train_column_count: 2 x_train columns: ['CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.30283814136290493 Spearman Correlation: 0.33773943741990686 Coefficient of Determination: 0.09171093986413881 RMSE: 0.20253162635642266 NRMSE: 0.14209156027699857 MAPE: 362.0685498012418 Pearson Correlation: 0.2244036246490851 Spearman Correlation: 0.31279442387062184 Coefficient of Determination: 0.023878292004170687 RMSE: 0.18606620706853874 NRMSE: 0.16184314374432554 MAPE: 145.4298826822379 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: RandomForests Pearson Correlation: 0.38429063561532717 Spearman Correlation: 0.366929487494884 Coefficient of Determination: 0.14614884835263475 RMSE: 0.19636853167347101 NRMSE: 0.13776767390236222 MAPE: 480.79342950124743 Pearson Correlation: 0.27910731531306143 Spearman Correlation: 0.30860684283191253 Coefficient of Determination: 0.0655555461704449 RMSE: 0.1820506628174801 NRMSE: 0.15835036385874218 MAPE: 188.00773874257487 Protein: PTEN x_train_column_count: 2 x_train columns: ['PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 0.4072865131698381 Spearman Correlation: 0.42638558686882855 Coefficient of Determination: 0.16588230381004465 RMSE: 0.5747347789582132 NRMSE: 0.08986549588901778 MAPE: 404.2589833986393 Pearson Correlation: 0.39405604994294663 Spearman Correlation: 0.41017718425416777 Coefficient of Determination: 0.14304763798020415 RMSE: 0.43597431013496196 NRMSE: 0.10423523887891789 MAPE: 124.49067922176826 Predictor: ElasticNet Pearson Correlation: 0.3655436809290258 Spearman Correlation: 0.42194300713482924 Coefficient of Determination: 0.0330739418851157 RMSE: 0.618800196705614 NRMSE: 0.09675556198977625 MAPE: 272.931449165861 Pearson Correlation: 0.3128306343218488 Spearman Correlation: 0.4095686978640632 Coefficient of Determination: -0.02617473400520587 RMSE: 0.47708220495463133 NRMSE: 0.11406355017324901 MAPE: 92.37901967981288 Predictor: RandomForests Pearson Correlation: 0.4499028394581808 Spearman Correlation: 0.4412973672078478 Coefficient of Determination: 0.19785587470071297 RMSE: 0.5636117187462313 NRMSE: 0.08812629485516868 MAPE: 529.999627248055 Pearson Correlation: 0.36802569178054084 Spearman Correlation: 0.4052177336372629 Coefficient of Determination: 0.13057248218352524 RMSE: 0.439136210575846 NRMSE: 0.10499120417344379 MAPE: 127.15369103812762 Protein: BRCA2 x_train_column_count: 2 x_train columns: ['BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.041792878211025765 Spearman Correlation: 0.01939600332719568 Coefficient of Determination: 0.0017466446691614124 RMSE: 0.18988410127620753 NRMSE: 0.1279783930096026 MAPE: 117.54169381782826 Pearson Correlation: -0.06902629512266369 Spearman Correlation: 0.03567376151822342 Coefficient of Determination: -0.010202916830925446 RMSE: 0.2152210295729276 NRMSE: 0.14803116437483416 MAPE: 114.85888676192782 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: RandomForests Pearson Correlation: 0.2849110177207724 Spearman Correlation: 0.24877779152842033 Coefficient of Determination: 0.043480422447812805 RMSE: 0.18587250235652525 NRMSE: 0.1252746490958707 MAPE: 119.24195656500636 Pearson Correlation: -0.007658302865057336 Spearman Correlation: -0.1128019880749639 Coefficient of Determination: -0.011912642612302848 RMSE: 0.21540307883029233 NRMSE: 0.14815637966441225 MAPE: 156.92480290760244 Protein: CDKN2A x_train_column_count: 2 x_train columns: ['CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.507693343863584 Spearman Correlation: 0.4769078997141356 Coefficient of Determination: 0.2577525314033874 RMSE: 0.5751523859196203 NRMSE: 0.13428100156883177 MAPE: 172.9755121609776 Pearson Correlation: 0.536825509758858 Spearman Correlation: 0.5740296013666005 Coefficient of Determination: 0.2814813280860866 RMSE: 0.5565203157253399 NRMSE: 0.1718132554491494 MAPE: 120.10925571451656 Predictor: ElasticNet Pearson Correlation: 0.5076634573044784 Spearman Correlation: 0.4770131653521852 Coefficient of Determination: 0.036194065040067835 RMSE: 0.6553953583733332 NRMSE: 0.1530153526273191 MAPE: 297.62018520166134 Pearson Correlation: 0.5368255097588582 Spearman Correlation: 0.5740296013666005 Coefficient of Determination: 0.03083138193311097 RMSE: 0.6463409394640487 NRMSE: 0.19954337299374786 MAPE: 171.39601367062235 Predictor: RandomForests Pearson Correlation: 0.6245172571557215 Spearman Correlation: 0.4954089061519607 Coefficient of Determination: 0.3894788522073944 RMSE: 0.5216256263174344 NRMSE: 0.12178409280851568 MAPE: 264.11801229845923 Pearson Correlation: 0.6251797457998285 Spearman Correlation: 0.5733110855363031 Coefficient of Determination: 0.38811166296195954 RMSE: 0.5135681488886652 NRMSE: 0.15855273035369863 MAPE: 124.73179501297591 Protein: TP53 x_train_column_count: 2 x_train columns: ['TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.5053931236282689 Spearman Correlation: 0.41983908151648314 Coefficient of Determination: 0.2554222094107388 RMSE: 0.3883974839700309 NRMSE: 0.09334234173757051 MAPE: 785.511951125836 Pearson Correlation: 0.4439948905095552 Spearman Correlation: 0.4119876806443971 Coefficient of Determination: 0.17360345730876148 RMSE: 0.3913048947996481 NRMSE: 0.14591727410686844 MAPE: 495.7762177532588 Predictor: ElasticNet Pearson Correlation: 0.42981494555150085 Spearman Correlation: 0.4149155626650531 Coefficient of Determination: 0.14923851401684607 RMSE: 0.41516934563435764 NRMSE: 0.09977633877297709 MAPE: 592.0417878959264 Pearson Correlation: 0.3568296991592001 Spearman Correlation: 0.4284168131772217 Coefficient of Determination: 0.10052329042227959 RMSE: 0.40824041418264795 NRMSE: 0.15223251538494306 MAPE: 321.0219558000427 Predictor: RandomForests Pearson Correlation: 0.5623094510875953 Spearman Correlation: 0.47048895812635816 Coefficient of Determination: 0.3097778302986154 RMSE: 0.3739519663833114 NRMSE: 0.08987069607866173 MAPE: 682.725921080577 Pearson Correlation: 0.4718926826594622 Spearman Correlation: 0.4533407801460297 Coefficient of Determination: 0.21127649970614626 RMSE: 0.38228162652909115 NRMSE: 0.14255250477463507 MAPE: 388.2496282805142 Protein: CTNNB1 x_train_column_count: 2 x_train columns: ['CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.05178759663075274 Spearman Correlation: 0.07970674194829598 Coefficient of Determination: 0.002681955164789862 RMSE: 0.7681652712541103 NRMSE: 0.15109466389734663 MAPE: 433.4860556646889 Pearson Correlation: 0.21972783891735956 Spearman Correlation: 0.26859935909425303 Coefficient of Determination: 0.009533031869933262 RMSE: 0.6100416416125433 NRMSE: 0.1994317047345592 MAPE: 1336.6191149722124 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: RandomForests Pearson Correlation: 0.28283871709746194 Spearman Correlation: 0.27248155031404964 Coefficient of Determination: 0.056911975463831976 RMSE: 0.7469885508843376 NRMSE: 0.14692929797095547 MAPE: 449.58995100093125 Pearson Correlation: 0.20590790949456775 Spearman Correlation: 0.1399556799237513 Coefficient of Determination: 0.026453487374958562 RMSE: 0.6048084295659103 NRMSE: 0.1977208897204584 MAPE: 1426.5538436896502 Protein: CCNE1 x_train_column_count: 2 x_train columns: ['CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.7311597617400973 Spearman Correlation: 0.7252454530166649 Coefficient of Determination: 0.5345945971878361 RMSE: 0.3564002360438113 NRMSE: 0.08601014456737006 MAPE: 77.47995130978394 Pearson Correlation: 0.6686208249928275 Spearman Correlation: 0.6712078704223245 Coefficient of Determination: 0.436477497449438 RMSE: 0.27391509441277184 NRMSE: 0.11931658945540438 MAPE: 97.29074571714725 Predictor: ElasticNet Pearson Correlation: 0.7311550781020141 Spearman Correlation: 0.724580992574438 Coefficient of Determination: 0.034002727367039465 RMSE: 0.5134642637329626 NRMSE: 0.12391443968746835 MAPE: 104.78887975263882 Pearson Correlation: 0.6686208249928273 Spearman Correlation: 0.6712078704223245 Coefficient of Determination: 0.022439477553301668 RMSE: 0.3607714493679508 NRMSE: 0.1571509558600648 MAPE: 131.9402450389214 Predictor: RandomForests Pearson Correlation: 0.8620576959955392 Spearman Correlation: 0.7260197277689745 Coefficient of Determination: 0.7409729273935419 RMSE: 0.26588562094289714 NRMSE: 0.06416623330426845 MAPE: 55.85462183805717 Pearson Correlation: 0.7693889488812767 Spearman Correlation: 0.6683249776710507 Coefficient of Determination: 0.5225628425841873 RMSE: 0.25212646899839464 NRMSE: 0.10982552990303378 MAPE: 78.16212414126768 Protein: CCND1 x_train_column_count: 2 x_train columns: ['CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.41041993626280227 Spearman Correlation: 0.40702588796834765 Coefficient of Determination: 0.16844452408196253 RMSE: 0.2231013144804463 NRMSE: 0.13412205845814423 MAPE: 532.0448309434951 Pearson Correlation: 0.3721019412428963 Spearman Correlation: 0.3490592152021846 Coefficient of Determination: 0.11233592807704806 RMSE: 0.197608097567355 NRMSE: 0.18724768325296826 MAPE: 345.7158784675023 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: RandomForests Pearson Correlation: 0.48699822442771834 Spearman Correlation: 0.43302356100040734 Coefficient of Determination: 0.2329800130729628 RMSE: 0.21426925304637665 NRMSE: 0.12881247853601416 MAPE: 532.0829627883396 Pearson Correlation: 0.3682241478957792 Spearman Correlation: 0.3545397794492318 Coefficient of Determination: 0.12538407752351843 RMSE: 0.19615035827191662 NRMSE: 0.18586637191391944 MAPE: 242.12255902019984 Protein: ERBB2 x_train_column_count: 2 x_train columns: ['ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 0.7577714831756106 Spearman Correlation: 0.6100374255569257 Coefficient of Determination: 0.5742176207141645 RMSE: 0.6402754959744398 NRMSE: 0.10908146855451553 MAPE: 317.38426815975174 Pearson Correlation: 0.7896049001679222 Spearman Correlation: 0.6822013768273945 Coefficient of Determination: 0.6161032986933295 RMSE: 0.6608224721923279 NRMSE: 0.11920457323622338 MAPE: 140.9130631786232 Predictor: ElasticNet Pearson Correlation: 0.757630742403632 Spearman Correlation: 0.6175542476381123 Coefficient of Determination: 0.11558711492132345 RMSE: 0.922785091803486 NRMSE: 0.1572116278180292 MAPE: 571.3407183590255 Pearson Correlation: 0.7901604979795926 Spearman Correlation: 0.693151651706485 Coefficient of Determination: 0.13519455858328966 RMSE: 0.9918290399756333 NRMSE: 0.17891425066304087 MAPE: 255.96928826626169 Predictor: RandomForests Pearson Correlation: 0.819999050484025 Spearman Correlation: 0.6221160255281639 Coefficient of Determination: 0.670233501848126 RMSE: 0.5634771446431789 NRMSE: 0.09599760543863893 MAPE: 549.6016379139869 Pearson Correlation: 0.8604407371645878 Spearman Correlation: 0.6851291397706071 Coefficient of Determination: 0.7380335646767575 RMSE: 0.5458840920255202 NRMSE: 0.09847104625613685 MAPE: 202.52741537438453 Protein: ERBB3 x_train_column_count: 2 x_train columns: ['ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.4155168149349653 Spearman Correlation: 0.4488994615192051 Coefficient of Determination: 0.1726542234936983 RMSE: 0.41022704953773176 NRMSE: 0.14874778344799855 MAPE: 207.48876867550993 Pearson Correlation: 0.39288858580380803 Spearman Correlation: 0.4288257958328658 Coefficient of Determination: 0.12949497157397416 RMSE: 0.4615796450969211 NRMSE: 0.12833242374280146 MAPE: 147.58872462952607 Predictor: ElasticNet Pearson Correlation: 0.41183478053528383 Spearman Correlation: 0.4548855783210745 Coefficient of Determination: 0.04755145498089686 RMSE: 0.4401508325951001 NRMSE: 0.15959810745071382 MAPE: 228.9864985313079 Pearson Correlation: 0.3951794335303434 Spearman Correlation: 0.4259180289031036 Coefficient of Determination: 0.025392691162460124 RMSE: 0.48840020639274356 NRMSE: 0.1357893115709303 MAPE: 155.3064269485719 Predictor: RandomForests Pearson Correlation: 0.4999772787130883 Spearman Correlation: 0.47145580278027005 Coefficient of Determination: 0.24936566604040078 RMSE: 0.39074639408774725 NRMSE: 0.14168412364895636 MAPE: 239.36369085083874 Pearson Correlation: 0.40632927276753494 Spearman Correlation: 0.4286995163716889 Coefficient of Determination: 0.13799826967697426 RMSE: 0.45931970330957334 NRMSE: 0.1277040948938829 MAPE: 166.28304846884032 Fold: 4 Protein: RB1 x_train_column_count: 2 x_train columns: ['RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.20060692894164195 Spearman Correlation: 0.2604016377206075 Coefficient of Determination: 0.04024313993939688 RMSE: 0.24639807895111004 NRMSE: 0.0901104735777904 MAPE: 268.474584573076 Pearson Correlation: 0.30196901578070473 Spearman Correlation: 0.3648499357847355 Coefficient of Determination: 0.0002383205805432942 RMSE: 0.16486270055052632 NRMSE: 0.15795682802909433 MAPE: 110.55468116716204 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: RandomForests Pearson Correlation: 0.33587973872955107 Spearman Correlation: 0.36911122268200713 Coefficient of Determination: 0.09983840079293904 RMSE: 0.23862555200044613 NRMSE: 0.08726797542438786 MAPE: 320.43761060518545 Pearson Correlation: 0.24547585772582137 Spearman Correlation: 0.34021236661701987 Coefficient of Determination: -0.038688053316477955 RMSE: 0.16804157162155683 NRMSE: 0.16100254054876484 MAPE: 112.68516338634271 Protein: CDH1 x_train_column_count: 2 x_train columns: ['CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 0.6283561737259781 Spearman Correlation: 0.6043608023599538 Coefficient of Determination: 0.39483148105955135 RMSE: 0.8705077411210568 NRMSE: 0.1386114679661566 MAPE: 525.2992992842646 Pearson Correlation: 0.6594828350563265 Spearman Correlation: 0.4286861432187434 Coefficient of Determination: 0.40975344237495814 RMSE: 0.8961522253801608 NRMSE: 0.1625761448024674 MAPE: 266.14079405117417 Predictor: ElasticNet Pearson Correlation: 0.5801534320303804 Spearman Correlation: 0.6043608023599538 Coefficient of Determination: 0.25440222149270286 RMSE: 0.9662439246943744 NRMSE: 0.153855597702999 MAPE: 446.3202265562293 Pearson Correlation: 0.6690233586069363 Spearman Correlation: 0.4286861432187434 Coefficient of Determination: 0.22097703235327792 RMSE: 1.0295327993623256 NRMSE: 0.18677348415556866 MAPE: 280.02077765988133 Predictor: RandomForests Pearson Correlation: 0.7170868613481379 Spearman Correlation: 0.6164999574023463 Coefficient of Determination: 0.5134008218156312 RMSE: 0.7805849239532742 NRMSE: 0.12429300403701699 MAPE: 350.21685279617446 Pearson Correlation: 0.7534410121952042 Spearman Correlation: 0.4433914078848621 Coefficient of Determination: 0.5171438694520781 RMSE: 0.810539027555178 NRMSE: 0.14704456071172636 MAPE: 167.69272835039988 Protein: CDH2 x_train_column_count: 2 x_train columns: ['CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.12726667220597057 Spearman Correlation: 0.07119849272849263 Coefficient of Determination: 0.01619680585438199 RMSE: 0.37627875453652904 NRMSE: 0.1363427619887416 MAPE: 647.1392020301223 Pearson Correlation: 0.20599048693772698 Spearman Correlation: -0.07145475629371938 Coefficient of Determination: -0.01867412055318085 RMSE: 0.3363643732494896 NRMSE: 0.17351965109234532 MAPE: 149.99280153684538 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: RandomForests Pearson Correlation: 0.20068017063291904 Spearman Correlation: 0.19591540058773488 Coefficient of Determination: 0.035911956927223376 RMSE: 0.37248941165378463 NRMSE: 0.13496971217254317 MAPE: 884.409767131594 Pearson Correlation: 0.13975849733951237 Spearman Correlation: -0.007879855739278996 Coefficient of Determination: -0.03649031714906359 RMSE: 0.33929306149406074 NRMSE: 0.1750304679408922 MAPE: 184.58079283105226 Protein: CDH3 x_train_column_count: 2 x_train columns: ['CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.25979163381132686 Spearman Correlation: 0.33119749144119476 Coefficient of Determination: 0.06749169299835867 RMSE: 0.1988400908643275 NRMSE: 0.14171079925333716 MAPE: 172.2514575740799 Pearson Correlation: 0.40672511917214177 Spearman Correlation: 0.3183905036222397 Coefficient of Determination: 0.03883447609789603 RMSE: 0.20372141380738007 NRMSE: 0.18132101554673624 MAPE: 583.080741899769 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: RandomForests Pearson Correlation: 0.3661650806172687 Spearman Correlation: 0.35439273671084043 Coefficient of Determination: 0.13219300783029397 RMSE: 0.19181791710406904 NRMSE: 0.13670618548688587 MAPE: 233.9258036788603 Pearson Correlation: 0.3409632548764403 Spearman Correlation: 0.30228083799903893 Coefficient of Determination: 0.027424343098695014 RMSE: 0.20492704927339866 NRMSE: 0.18239408412108035 MAPE: 815.7562828804256 Protein: PTEN x_train_column_count: 2 x_train columns: ['PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 0.39878139984580147 Spearman Correlation: 0.4180860156644668 Coefficient of Determination: 0.15902660486297693 RMSE: 0.5151792949664966 NRMSE: 0.09965554297556806 MAPE: 256.24798471700336 Pearson Correlation: 0.45693850315452994 Spearman Correlation: 0.4803975111909126 Coefficient of Determination: 0.17119066649265402 RMSE: 0.6787604679974605 NRMSE: 0.10613094644632327 MAPE: 583.33443262178 Predictor: ElasticNet Pearson Correlation: 0.39770673577924787 Spearman Correlation: 0.4125541754874478 Coefficient of Determination: 0.022875863298735255 RMSE: 0.5553185009998366 NRMSE: 0.1074200133472293 MAPE: 255.34051456144576 Pearson Correlation: 0.43523300472586723 Spearman Correlation: 0.4688213069988404 Coefficient of Determination: 0.0164627947309528 RMSE: 0.7394088092038386 NRMSE: 0.11561391747382356 MAPE: 368.679731963499 Predictor: RandomForests Pearson Correlation: 0.4478237093284196 Spearman Correlation: 0.4392056931844835 Coefficient of Determination: 0.19412017651037705 RMSE: 0.5043156127290602 NRMSE: 0.09755408788476096 MAPE: 267.2985539429079 Pearson Correlation: 0.43694710197252795 Spearman Correlation: 0.47224052214471246 Coefficient of Determination: 0.1541743166419286 RMSE: 0.685692908536918 NRMSE: 0.10721490243716957 MAPE: 505.48158517052127 Protein: BRCA2 x_train_column_count: 2 x_train columns: ['BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.031355400239228316 Spearman Correlation: 0.022070337100895607 Coefficient of Determination: 0.0009831611241620797 RMSE: 0.1917029603855912 NRMSE: 0.12350005500762842 MAPE: 112.56460310840531 Pearson Correlation: -0.15046217289321676 Spearman Correlation: -0.17513185949949503 Coefficient of Determination: -0.009292734561542115 RMSE: 0.20907209366483526 NRMSE: 0.20311868500727212 MAPE: 147.09577718569935 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: RandomForests Pearson Correlation: 0.29655276349912 Spearman Correlation: 0.22726838369478033 Coefficient of Determination: 0.043457546176612016 RMSE: 0.1875834591496981 NRMSE: 0.12084616469621395 MAPE: 118.91691027594236 Pearson Correlation: -0.017904957737888395 Spearman Correlation: -0.025811139021213243 Coefficient of Determination: -0.009008578168265391 RMSE: 0.20904266050231404 NRMSE: 0.20309008996542738 MAPE: 117.9011717023568 Protein: CDKN2A x_train_column_count: 2 x_train columns: ['CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.5089221041870784 Spearman Correlation: 0.5041911579291467 Coefficient of Determination: 0.2590017081302034 RMSE: 0.5801489558247752 NRMSE: 0.13115156681920992 MAPE: 149.9393097274552 Pearson Correlation: 0.5446033666939744 Spearman Correlation: 0.4884824000299256 Coefficient of Determination: 0.2777407009263906 RMSE: 0.5359847673250289 NRMSE: 0.16148983649443474 MAPE: 114.82947426453742 Predictor: ElasticNet Pearson Correlation: 0.5089092587161527 Spearman Correlation: 0.5043429685491743 Coefficient of Determination: 0.037163054596823675 RMSE: 0.6613133420180523 NRMSE: 0.1495000208020916 MAPE: 271.1427747808473 Pearson Correlation: 0.5446033666939746 Spearman Correlation: 0.4884824000299256 Coefficient of Determination: 0.03400642578349122 RMSE: 0.619859119380289 NRMSE: 0.186760807285414 MAPE: 190.37084461363898 Predictor: RandomForests Pearson Correlation: 0.6315021316579708 Spearman Correlation: 0.5175085850702341 Coefficient of Determination: 0.39829848360987263 RMSE: 0.5227830094552866 NRMSE: 0.11818311505714627 MAPE: 286.8091880382585 Pearson Correlation: 0.6229828385819468 Spearman Correlation: 0.48235825210423916 Coefficient of Determination: 0.3606879562454919 RMSE: 0.5042690563417233 NRMSE: 0.1519340332454725 MAPE: 126.41263181421061 Protein: TP53 x_train_column_count: 2 x_train columns: ['TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 0.4860893149117717 Spearman Correlation: 0.4243656276327849 Coefficient of Determination: 0.2362828220713954 RMSE: 0.3933632479692207 NRMSE: 0.09453574813006986 MAPE: 828.1545630718925 Pearson Correlation: 0.5182851011843874 Spearman Correlation: 0.3708300602251899 Coefficient of Determination: 0.2663495972611567 RMSE: 0.3698619384945789 NRMSE: 0.11737177535369982 MAPE: 312.66501479205846 Predictor: ElasticNet Pearson Correlation: 0.4119426893595013 Spearman Correlation: 0.4248365487997839 Coefficient of Determination: 0.13670242839758706 RMSE: 0.41822285395132747 NRMSE: 0.100510178791475 MAPE: 628.3146304155263 Pearson Correlation: 0.4171869649733271 Spearman Correlation: 0.3702265614284468 Coefficient of Determination: 0.1402908645691523 RMSE: 0.40037857747909156 NRMSE: 0.12705590806013314 MAPE: 189.06293953118615 Predictor: RandomForests Pearson Correlation: 0.5433299028550151 Spearman Correlation: 0.47716216341157186 Coefficient of Determination: 0.28875859293730977 RMSE: 0.3796085782752249 NRMSE: 0.09123013176525473 MAPE: 734.2104172925882 Pearson Correlation: 0.573766741233823 Spearman Correlation: 0.4235391959329385 Coefficient of Determination: 0.3114762468831195 RMSE: 0.35830636664522525 NRMSE: 0.11370473681303161 MAPE: 259.9091372224781 Protein: CTNNB1 x_train_column_count: 2 x_train columns: ['CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.10843630357153901 Spearman Correlation: 0.1359617506577901 Coefficient of Determination: 0.011758431932259117 RMSE: 0.7072318312612121 NRMSE: 0.17081244113158445 MAPE: 573.7039748296245 Pearson Correlation: -0.09138017300424382 Spearman Correlation: 0.03373358770059477 Coefficient of Determination: -0.1681635116379343 RMSE: 0.8673055149001679 NRMSE: 0.18234494888995204 MAPE: 970.4637210419448 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: RandomForests Pearson Correlation: 0.27073272495551043 Spearman Correlation: 0.25332746502304954 Coefficient of Determination: 0.05488063472280302 RMSE: 0.6916295995789115 NRMSE: 0.16704415022193786 MAPE: 598.8045248717256 Pearson Correlation: 0.07267382808851819 Spearman Correlation: 0.13823949839064295 Coefficient of Determination: -0.133416084696651 RMSE: 0.8543089877843627 NRMSE: 0.17961251950726656 MAPE: 916.3275962998433 Protein: CCNE1 x_train_column_count: 2 x_train columns: ['CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.7284683731401493 Spearman Correlation: 0.7111124100209031 Coefficient of Determination: 0.5306661706654558 RMSE: 0.34583107511272226 NRMSE: 0.08345948671784209 MAPE: 76.12249959628303 Pearson Correlation: 0.8235508887291155 Spearman Correlation: 0.7249192633324606 Coefficient of Determination: 0.4773065355083248 RMSE: 0.32685155153597323 NRMSE: 0.13337613300251908 MAPE: 111.11785800324701 Predictor: ElasticNet Pearson Correlation: 0.7284659471489123 Spearman Correlation: 0.7105645817584747 Coefficient of Determination: 0.03609851240051165 RMSE: 0.495609258133238 NRMSE: 0.11960548739851774 MAPE: 101.98356781651003 Pearson Correlation: 0.8235508887291157 Spearman Correlation: 0.7249192633324606 Coefficient of Determination: 0.006382326787262915 RMSE: 0.4506471924042329 NRMSE: 0.18389259463161386 MAPE: 141.54779063373678 Predictor: RandomForests Pearson Correlation: 0.8558319038801104 Spearman Correlation: 0.7158571558170889 Coefficient of Determination: 0.7288377951807345 RMSE: 0.26286796528567175 NRMSE: 0.06343798182437718 MAPE: 55.5244048092431 Pearson Correlation: 0.8456838474620257 Spearman Correlation: 0.7088274541368929 Coefficient of Determination: 0.7022821756292825 RMSE: 0.24667744086523613 NRMSE: 0.10066001830785773 MAPE: 69.87901290517232 Protein: CCND1 x_train_column_count: 2 x_train columns: ['CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 0.3685130012930123 Spearman Correlation: 0.3770817368013094 Coefficient of Determination: 0.1358018321219837 RMSE: 0.22339496125150415 NRMSE: 0.14272432070348204 MAPE: 535.7883211967126 Pearson Correlation: 0.601289204395813 Spearman Correlation: 0.49870696642102774 Coefficient of Determination: 0.2640304431782867 RMSE: 0.19645763795204482 NRMSE: 0.12390113392535623 MAPE: 466.48624547544284 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: RandomForests Pearson Correlation: 0.4536960474814516 Spearman Correlation: 0.39958941232777434 Coefficient of Determination: 0.2019813527443235 RMSE: 0.2146709224136968 NRMSE: 0.1371506385132421 MAPE: 504.6727797801616 Pearson Correlation: 0.5244663896500243 Spearman Correlation: 0.5018856606099847 Coefficient of Determination: 0.2568204270681399 RMSE: 0.1974176032612837 NRMSE: 0.12450656108809517 MAPE: 425.3854561538555 Protein: ERBB2 x_train_column_count: 2 x_train columns: ['ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 0.7682081923909599 Spearman Correlation: 0.6162165032172298 Coefficient of Determination: 0.590143826856586 RMSE: 0.6279242487374764 NRMSE: 0.10697723030776299 MAPE: 241.54847020287784 Pearson Correlation: 0.7616187596336661 Spearman Correlation: 0.6420536940037835 Coefficient of Determination: 0.5262982087977873 RMSE: 0.713495742528176 NRMSE: 0.128479083539485 MAPE: 138.43731356115447 Predictor: ElasticNet Pearson Correlation: 0.7679926094943187 Spearman Correlation: 0.6238582415521245 Coefficient of Determination: 0.1255394977233607 RMSE: 0.9171948622220906 NRMSE: 0.156259240203433 MAPE: 494.58396559837263 Pearson Correlation: 0.7633533110364072 Spearman Correlation: 0.67230847305938 Coefficient of Determination: 0.05393946327245469 RMSE: 1.008319894481971 NRMSE: 0.1815680294021628 MAPE: 181.7881291596889 Predictor: RandomForests Pearson Correlation: 0.837912110164944 Spearman Correlation: 0.6242468308358713 Coefficient of Determination: 0.7012149842957249 RMSE: 0.5361310018094477 NRMSE: 0.09133873993721106 MAPE: 438.3412943231485 Pearson Correlation: 0.7903040042412042 Spearman Correlation: 0.6588300179349611 Coefficient of Determination: 0.5700413694558568 RMSE: 0.6797546826519252 NRMSE: 0.12240333537147066 MAPE: 216.94371412894742 Protein: ERBB3 x_train_column_count: 2 x_train columns: ['ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.4273351658974776 Spearman Correlation: 0.4720962329906372 Coefficient of Determination: 0.18261534401262447 RMSE: 0.4318996827136457 NRMSE: 0.11809604716015458 MAPE: 214.16240623612245 Pearson Correlation: 0.3214455561385766 Spearman Correlation: 0.3196972530829562 Coefficient of Determination: 0.05426262057332676 RMSE: 0.3740011144567562 NRMSE: 0.1840855623485882 MAPE: 195.28806863141347 Predictor: ElasticNet Pearson Correlation: 0.4247436800277297 Spearman Correlation: 0.47559620013365334 Coefficient of Determination: 0.052293998830256094 RMSE: 0.4650572936414082 NRMSE: 0.12716246452642826 MAPE: 228.96221396898238 Pearson Correlation: 0.32037558123944104 Spearman Correlation: 0.3203655905933989 Coefficient of Determination: 0.04457551775447022 RMSE: 0.3759116643926464 NRMSE: 0.18502594633609118 MAPE: 211.72148713759594 Predictor: RandomForests Pearson Correlation: 0.5017575914848379 Spearman Correlation: 0.4921605147487151 Coefficient of Determination: 0.2503000193256526 RMSE: 0.41363129949439237 NRMSE: 0.11310085051484675 MAPE: 238.28030543478857 Pearson Correlation: 0.4041323955475392 Spearman Correlation: 0.32032765592468015 Coefficient of Determination: 0.13857368373267354 RMSE: 0.3569412060034264 NRMSE: 0.1756885744256825 MAPE: 237.4408613379951 Fold: 5 Protein: RB1 x_train_column_count: 2 x_train columns: ['RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.20085496902715008 Spearman Correlation: 0.2752781534619621 Coefficient of Determination: 0.04034271858289751 RMSE: 0.2291383097824755 NRMSE: 0.11319776398061263 MAPE: 189.7845976587257 Pearson Correlation: 0.20388375085778995 Spearman Correlation: 0.27589122058878546 Coefficient of Determination: -0.05165042013578813 RMSE: 0.2464989567972049 NRMSE: 0.12428602383740642 MAPE: 398.8345770216967 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: RandomForests Pearson Correlation: 0.31485917689054416 Spearman Correlation: 0.35980883320861423 Coefficient of Determination: 0.09143497772665987 RMSE: 0.22295521264550094 NRMSE: 0.11014322119793744 MAPE: 211.11353689620057 Pearson Correlation: 0.21073876889670415 Spearman Correlation: 0.23734088200910924 Coefficient of Determination: -0.048930325756177284 RMSE: 0.24617996555346097 NRMSE: 0.12412518683493384 MAPE: 529.0963669136031 Protein: CDH1 x_train_column_count: 2 x_train columns: ['CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.6708049982918738 Spearman Correlation: 0.5863907407236872 Coefficient of Determination: 0.44997934573336096 RMSE: 0.8351336136424325 NRMSE: 0.1329788245027917 MAPE: 239.97315127050155 Pearson Correlation: 0.4947900491430656 Spearman Correlation: 0.5419893016122396 Coefficient of Determination: 0.23097867498219748 RMSE: 1.0187814848685817 NRMSE: 0.20034640122486908 MAPE: 1057.7388099624375 Predictor: ElasticNet Pearson Correlation: 0.6341139686734713 Spearman Correlation: 0.5863907407236872 Coefficient of Determination: 0.30223363684820337 RMSE: 0.9406357484043488 NRMSE: 0.14977799248500823 MAPE: 201.25754639649074 Pearson Correlation: 0.4449439762327003 Spearman Correlation: 0.5419893016122396 Coefficient of Determination: 0.1618508310411002 RMSE: 1.0635857535973325 NRMSE: 0.20915729358268914 MAPE: 830.8535765410248 Predictor: RandomForests Pearson Correlation: 0.752527698805492 Spearman Correlation: 0.5997030844442153 Coefficient of Determination: 0.5655603073095317 RMSE: 0.7422175409284361 NRMSE: 0.11818374270380497 MAPE: 167.71007551694782 Pearson Correlation: 0.6207617657985194 Spearman Correlation: 0.5415000057010412 Coefficient of Determination: 0.37224542865460575 RMSE: 0.9204639713007754 NRMSE: 0.18101197052187282 MAPE: 664.1049782598297 Protein: CDH2 x_train_column_count: 2 x_train columns: ['CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.13779348913082884 Spearman Correlation: 0.08045708714407543 Coefficient of Determination: 0.01898704564684761 RMSE: 0.35571059757383505 NRMSE: 0.1747019289690266 MAPE: 223.6057699793705 Pearson Correlation: 0.15378835582174152 Spearman Correlation: -0.1015076266632875 Coefficient of Determination: 0.003933247704367537 RMSE: 0.4162705035251315 NRMSE: 0.1556646050240755 MAPE: 219.4431412490483 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: RandomForests Pearson Correlation: 0.22253682981851214 Spearman Correlation: 0.23318569533283007 Coefficient of Determination: 0.045045055903606745 RMSE: 0.3509545471997903 NRMSE: 0.17236606610666974 MAPE: 516.5377300569406 Pearson Correlation: 0.026217908489947494 Spearman Correlation: 0.015572765713213336 Coefficient of Determination: -0.029644558126573406 RMSE: 0.42322867092265415 NRMSE: 0.1582666159051116 MAPE: 420.9054738110474 Protein: CDH3 x_train_column_count: 2 x_train columns: ['CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.29134736531777045 Spearman Correlation: 0.340226826258159 Coefficient of Determination: 0.08488328727760619 RMSE: 0.1949277980846216 NRMSE: 0.13675688814378234 MAPE: 331.6915253979446 Pearson Correlation: 0.2659003010342307 Spearman Correlation: 0.2940460604246936 Coefficient of Determination: 0.0663678352834659 RMSE: 0.21585186059783473 NRMSE: 0.19474360161841475 MAPE: 122.57887592000753 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: RandomForests Pearson Correlation: 0.3697002386602205 Spearman Correlation: 0.3702285475555668 Coefficient of Determination: 0.13532228695214488 RMSE: 0.18947969027848924 NRMSE: 0.13293462022119973 MAPE: 428.8692666441503 Pearson Correlation: 0.33392383751857757 Spearman Correlation: 0.2896321859679133 Coefficient of Determination: 0.1080813307623334 RMSE: 0.21097476953916952 NRMSE: 0.190343443678822 MAPE: 147.6576392773054 Protein: PTEN x_train_column_count: 2 x_train columns: ['PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 0.4104787973032004 Spearman Correlation: 0.4294724284369952 Coefficient of Determination: 0.16849284303548206 RMSE: 0.5188792564179012 NRMSE: 0.08113192970336974 MAPE: 331.44722071134805 Pearson Correlation: 0.4107851156492474 Spearman Correlation: 0.4342123966633 Coefficient of Determination: 0.16313502873870145 RMSE: 0.660217650275519 NRMSE: 0.12771155413871849 MAPE: 278.9418873604839 Predictor: ElasticNet Pearson Correlation: 0.33171248041036194 Spearman Correlation: 0.4257688658695016 Coefficient of Determination: 0.03156345131364002 RMSE: 0.5599753357148369 NRMSE: 0.08755771022044202 MAPE: 287.15820932104185 Pearson Correlation: 0.3017326894888323 Spearman Correlation: 0.43622738438135145 Coefficient of Determination: 0.013940710567653225 RMSE: 0.7166563445710845 NRMSE: 0.13862897411232677 MAPE: 390.52261188702005 Predictor: RandomForests Pearson Correlation: 0.4466690553755365 Spearman Correlation: 0.4428356386057776 Coefficient of Determination: 0.19585657736412887 RMSE: 0.5102700403029308 NRMSE: 0.07978579318316484 MAPE: 452.43953537742954 Pearson Correlation: 0.4051842265932541 Spearman Correlation: 0.42716816404129 Coefficient of Determination: 0.15737519783928322 RMSE: 0.6624857707957034 NRMSE: 0.1281502961149225 MAPE: 396.73535886051974 Protein: BRCA2 x_train_column_count: 2 x_train columns: ['BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.04258162893050467 Spearman Correlation: 0.042700362873653835 Coefficient of Determination: 0.0018131951223752107 RMSE: 0.20028637440070748 NRMSE: 0.12902971454386053 MAPE: 117.46994060512206 Pearson Correlation: -0.05644220399099402 Spearman Correlation: -0.03929974189204354 Coefficient of Determination: -0.10808195556882616 RMSE: 0.1748328480970483 NRMSE: 0.2286442792088515 MAPE: 113.30018821972736 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: RandomForests Pearson Correlation: 0.28083441731695136 Spearman Correlation: 0.22517775526251882 Coefficient of Determination: 0.041887983610824686 RMSE: 0.19622468301996276 NRMSE: 0.12641306685132084 MAPE: 123.80869397941534 Pearson Correlation: -0.0826894351690544 Spearman Correlation: -0.0055284252872204115 Coefficient of Determination: -0.11650690740137781 RMSE: 0.17549623274850445 NRMSE: 0.22951184561368526 MAPE: 122.17219062749409 Protein: CDKN2A x_train_column_count: 2 x_train columns: ['CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 0.5624274536735127 Spearman Correlation: 0.5457610564847619 Coefficient of Determination: 0.31632464064567123 RMSE: 0.5619972943401821 NRMSE: 0.14310745698866392 MAPE: 132.7739544095686 Pearson Correlation: 0.31075863610910964 Spearman Correlation: 0.30899387772914877 Coefficient of Determination: -0.038336376712090114 RMSE: 0.6174551979095126 NRMSE: 0.15536981905576425 MAPE: 273.2245382084838 Predictor: ElasticNet Pearson Correlation: 0.5622615976105251 Spearman Correlation: 0.543492990453 Coefficient of Determination: 0.043614849122490695 RMSE: 0.6646999914466629 NRMSE: 0.16925975693174683 MAPE: 263.2496894992825 Pearson Correlation: 0.31254093595626364 Spearman Correlation: 0.30912355515654816 Coefficient of Determination: 0.02685403607608683 RMSE: 0.5977580167034392 NRMSE: 0.15041343114250755 MAPE: 270.43697846957156 Predictor: RandomForests Pearson Correlation: 0.6804985222571751 Spearman Correlation: 0.5578792484186119 Coefficient of Determination: 0.4625852388380224 RMSE: 0.4982692159571973 NRMSE: 0.12687968627159923 MAPE: 263.8935646704191 Pearson Correlation: 0.3800441671847586 Spearman Correlation: 0.31043525603050665 Coefficient of Determination: -0.060342568086227955 RMSE: 0.6239639730831126 NRMSE: 0.15700761759470386 MAPE: 482.2917517452506 Protein: TP53 x_train_column_count: 2 x_train columns: ['TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.49617263785200455 Spearman Correlation: 0.422330008616601 Coefficient of Determination: 0.24618728655301647 RMSE: 0.3679471476677106 NRMSE: 0.0935799861816706 MAPE: 859.2353578766183 Pearson Correlation: 0.4953512943674849 Spearman Correlation: 0.4048504345440717 Coefficient of Determination: 0.22896449037527777 RMSE: 0.4637575708863095 NRMSE: 0.12421523259309214 MAPE: 201.1391628651781 Predictor: ElasticNet Pearson Correlation: 0.4130677360219776 Spearman Correlation: 0.42206730689390887 Coefficient of Determination: 0.13566044112480802 RMSE: 0.3939997141985829 NRMSE: 0.10020593458597189 MAPE: 639.6139187601407 Pearson Correlation: 0.43444699491224426 Spearman Correlation: 0.4026459182782828 Coefficient of Determination: 0.1211659925926244 RMSE: 0.49511632911090997 NRMSE: 0.13261452500627025 MAPE: 164.29007359790015 Predictor: RandomForests Pearson Correlation: 0.5521256103058233 Spearman Correlation: 0.47180378890603203 Coefficient of Determination: 0.2972112301119625 RMSE: 0.3552762026792161 NRMSE: 0.09035738515201712 MAPE: 775.3845060972717 Pearson Correlation: 0.5465054322677453 Spearman Correlation: 0.44806802433589593 Coefficient of Determination: 0.27120395577791856 RMSE: 0.45087569635488056 NRMSE: 0.12076488451985552 MAPE: 196.2282167443031 Protein: CTNNB1 x_train_column_count: 2 x_train columns: ['CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.05183983941471336 Spearman Correlation: 0.07847807921027664 Coefficient of Determination: 0.002687368950543112 RMSE: 0.7549643112450443 NRMSE: 0.14849809426535096 MAPE: 681.6283540032656 Pearson Correlation: 0.16859534211479743 Spearman Correlation: 0.23237945610294397 Coefficient of Determination: 0.01567997666776466 RMSE: 0.6723239116067103 NRMSE: 0.21532348989290584 MAPE: 272.7498867093379 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: RandomForests Pearson Correlation: 0.2709132651209278 Spearman Correlation: 0.26370850559812414 Coefficient of Determination: 0.053288494500083106 RMSE: 0.7355625165488577 NRMSE: 0.14468184825902003 MAPE: 720.5866044879414 Pearson Correlation: 0.21966619098758056 Spearman Correlation: 0.2606286481137723 Coefficient of Determination: 0.03927354356881829 RMSE: 0.6642174375171072 NRMSE: 0.212727249804511 MAPE: 272.48748832271815 Protein: CCNE1 x_train_column_count: 2 x_train columns: ['CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.7386144499663949 Spearman Correlation: 0.7133623941506215 Coefficient of Determination: 0.5455513056991599 RMSE: 0.30254403319355194 NRMSE: 0.10776279009565519 MAPE: 69.0319524869495 Pearson Correlation: 0.781374184017237 Spearman Correlation: 0.719053853539321 Coefficient of Determination: 0.2511630435543254 RMSE: 0.5608323339417695 NRMSE: 0.13534578611911321 MAPE: 91.42172628039428 Predictor: ElasticNet Pearson Correlation: 0.738594319254128 Spearman Correlation: 0.7126097756485593 Coefficient of Determination: 0.007567693152254362 RMSE: 0.4470917014441189 NRMSE: 0.1592490477093923 MAPE: 111.77428568277894 Pearson Correlation: 0.7813741840172375 Spearman Correlation: 0.719053853539321 Coefficient of Determination: 0.010854312748939554 RMSE: 0.6445691866711409 NRMSE: 0.15555401855132875 MAPE: 115.23680749144577 Predictor: RandomForests Pearson Correlation: 0.8556441900853572 Spearman Correlation: 0.7114927920105991 Coefficient of Determination: 0.7307222498598404 RMSE: 0.23288761708519015 NRMSE: 0.08295195621912382 MAPE: 56.512948131727114 Pearson Correlation: 0.8005340807679645 Spearman Correlation: 0.7307358786224182 Coefficient of Determination: 0.6136504949478718 RMSE: 0.4028372194679773 NRMSE: 0.09721679162776681 MAPE: 78.43246041847577 Protein: CCND1 x_train_column_count: 2 x_train columns: ['CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.41703950887211055 Spearman Correlation: 0.4316396213226719 Coefficient of Determination: 0.17392195196029125 RMSE: 0.20688004904562254 NRMSE: 0.13030336657615044 MAPE: 582.8211463851485 Pearson Correlation: 0.358992718576449 Spearman Correlation: 0.2762503273108144 Coefficient of Determination: 0.12651562367455815 RMSE: 0.2579122947086627 NRMSE: 0.16477702476882655 MAPE: 243.26044499421093 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: RandomForests Pearson Correlation: 0.491338635402475 Spearman Correlation: 0.4512173853537595 Coefficient of Determination: 0.23817352746790288 RMSE: 0.19867174193036233 NRMSE: 0.12513336562176405 MAPE: 544.3909708292624 Pearson Correlation: 0.39141166085500984 Spearman Correlation: 0.2942353603372814 Coefficient of Determination: 0.15022210570379357 RMSE: 0.25438833306784453 NRMSE: 0.16252560858399748 MAPE: 251.6905399030386 Protein: ERBB2 x_train_column_count: 2 x_train columns: ['ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.777741024967773 Spearman Correlation: 0.6469409697107757 Coefficient of Determination: 0.6048811019179227 RMSE: 0.6461351361477838 NRMSE: 0.11007975469747752 MAPE: 308.27260346052265 Pearson Correlation: 0.6808501187711699 Spearman Correlation: 0.5812566241474333 Coefficient of Determination: 0.4627290572188175 RMSE: 0.6360282769523837 NRMSE: 0.14072978801911357 MAPE: 206.91995102656927 Predictor: ElasticNet Pearson Correlation: 0.7776877249625477 Spearman Correlation: 0.6442627066647334 Coefficient of Determination: 0.1450022768252186 RMSE: 0.9504777094635037 NRMSE: 0.1619295210084849 MAPE: 565.9588918044528 Pearson Correlation: 0.6819514367848012 Spearman Correlation: 0.5872666741480568 Coefficient of Determination: 0.10114366891644255 RMSE: 0.8226685378325667 NRMSE: 0.18202644934894716 MAPE: 515.595693134085 Predictor: RandomForests Pearson Correlation: 0.838022725420146 Spearman Correlation: 0.6476716327438983 Coefficient of Determination: 0.7007492231903293 RMSE: 0.5623116746672499 NRMSE: 0.09579904844664121 MAPE: 556.9708624977075 Pearson Correlation: 0.7751002688381805 Spearman Correlation: 0.5803322760177033 Coefficient of Determination: 0.5949869104508938 RMSE: 0.552222728245644 NRMSE: 0.12218668619219915 MAPE: 295.855146905497 Protein: ERBB3 x_train_column_count: 2 x_train columns: ['ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.38037588116825777 Spearman Correlation: 0.4068847131242151 Coefficient of Determination: 0.14468581097452848 RMSE: 0.43366315788138476 NRMSE: 0.11703323947606775 MAPE: 213.25911644947954 Pearson Correlation: 0.5205117505086532 Spearman Correlation: 0.5682040923203532 Coefficient of Determination: 0.23122433378792018 RMSE: 0.36559820177555424 NRMSE: 0.17688751997036745 MAPE: 191.6440770818296 Predictor: ElasticNet Pearson Correlation: 0.3773884363248901 Spearman Correlation: 0.41142820549776254 Coefficient of Determination: 0.04050378060667925 RMSE: 0.4593157350355365 NRMSE: 0.12395613377939546 MAPE: 241.4756185728408 Pearson Correlation: 0.5207896565156246 Spearman Correlation: 0.5619845633985462 Coefficient of Determination: 0.008092447027275074 RMSE: 0.4152788712398118 NRMSE: 0.2009245375741769 MAPE: 230.8356588688801 Predictor: RandomForests Pearson Correlation: 0.46250152633420993 Spearman Correlation: 0.42563618973560513 Coefficient of Determination: 0.2129052469927859 RMSE: 0.4160094520573886 NRMSE: 0.11226901096416611 MAPE: 251.67445603380173 Pearson Correlation: 0.545541337658826 Spearman Correlation: 0.5588239281487987 Coefficient of Determination: 0.2690442607444641 RMSE: 0.35649199069533327 NRMSE: 0.1724816583263984 MAPE: 218.38546188635024
TMM
scenario = Scenario.selfmRNA_Mutations
normalizeTechnique = NormalizeTechnique.TMM
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12.2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 6.676054 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SH-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SJ-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SK-01 | 6.676054 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SQ-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 2 x_train columns: ['RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.05504379040979619 Spearman Correlation: 0.08821076320394274 Coefficient of Determination: 0.0030298188626775024 RMSE: 0.22376218112999346 NRMSE: 0.0847423522552522 MAPE: 229.42382006188976 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.032268173142278256 RMSE: 0.2849553912297033 NRMSE: 0.14077223992812243 MAPE: 135.27061572834347 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: RandomForests Pearson Correlation: 0.055043790409796206 Spearman Correlation: 0.08821076320394274 Coefficient of Determination: 0.003021718495352821 RMSE: 0.22376309016027998 NRMSE: 0.08474269651970459 MAPE: 230.01195848878822 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.032405931435628865 RMSE: 0.2849744045344925 NRMSE: 0.14078163278604333 MAPE: 135.42961258394973 Protein: CDH1 x_train_column_count: 2 x_train columns: ['CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 0.5325545159322607 Spearman Correlation: 0.4380937074945903 Coefficient of Determination: 0.2836143124398445 RMSE: 0.9550995749028409 NRMSE: 0.1605398239965779 MAPE: 282.8757455588596 Pearson Correlation: 0.5892327262486392 Spearman Correlation: 0.48311812235298823 Coefficient of Determination: 0.34476824713087406 RMSE: 0.9392252259691437 NRMSE: 0.15212095914760515 MAPE: 179.88442758525218 Predictor: ElasticNet Pearson Correlation: 0.5325545159322611 Spearman Correlation: 0.4380937074945903 Coefficient of Determination: 0.21572800685910398 RMSE: 0.999329147351392 NRMSE: 0.16797424022177265 MAPE: 382.05427862941536 Pearson Correlation: 0.589232726248639 Spearman Correlation: 0.48311812235298823 Coefficient of Determination: 0.24999509306970313 RMSE: 1.0048571641171065 NRMSE: 0.16275099026871603 MAPE: 237.03517882876758 Predictor: RandomForests Pearson Correlation: 0.5325545159322603 Spearman Correlation: 0.4380937074945903 Coefficient of Determination: 0.28361235512360894 RMSE: 0.9551008796683186 NRMSE: 0.16054004331069513 MAPE: 282.5107241906225 Pearson Correlation: 0.5892327262486392 Spearman Correlation: 0.48311812235298823 Coefficient of Determination: 0.34489006876857986 RMSE: 0.9391379108524818 NRMSE: 0.15210681721558775 MAPE: 179.6694131270262 Protein: CDH2 x_train_column_count: 2 x_train columns: ['CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.0021369891684559924 Spearman Correlation: 0.017615519581153163 Coefficient of Determination: 4.566722706211834e-06 RMSE: 0.3711936150500221 NRMSE: 0.1371301965184963 MAPE: 486.16457117387233 Pearson Correlation: -0.07468445577572305 Spearman Correlation: -0.05435078876471117 Coefficient of Determination: -0.0005919242071077413 RMSE: 0.37522599375715276 NRMSE: 0.19364503987054382 MAPE: 105.14910145406739 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: RandomForests Pearson Correlation: 0.002136989168455994 Spearman Correlation: 0.017615519581153163 Coefficient of Determination: -3.418287103240658e-05 RMSE: 0.37120080681408685 NRMSE: 0.13713285337459385 MAPE: 554.0742535696029 Pearson Correlation: -0.07468445577572307 Spearman Correlation: -0.05435078876471117 Coefficient of Determination: -0.0015171950953063451 RMSE: 0.3753994438193196 NRMSE: 0.19373455324318503 MAPE: 104.64344861322338 Protein: CDH3 x_train_column_count: 2 x_train columns: ['CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.04084171519194229 Spearman Correlation: 0.048045840519453896 Coefficient of Determination: 0.001668045699819598 RMSE: 0.20862555619533177 NRMSE: 0.1463669221777879 MAPE: 118.87482330563796 Pearson Correlation: 0.09403583475407701 Spearman Correlation: 0.12192115267996365 Coefficient of Determination: 0.004681724099584228 RMSE: 0.20409987174259145 NRMSE: 0.1562176116084771 MAPE: 109.51106729177917 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: RandomForests Pearson Correlation: 0.0407963289373056 Spearman Correlation: 0.048045840519453896 Coefficient of Determination: 0.0016492508178754806 RMSE: 0.2086275200081836 NRMSE: 0.14636829994400263 MAPE: 122.92205965301919 Pearson Correlation: 0.09403583475407695 Spearman Correlation: 0.12192115267996365 Coefficient of Determination: 0.004510253609693926 RMSE: 0.20411745184670085 NRMSE: 0.15623106738310524 MAPE: 112.25455978219631 Protein: PTEN x_train_column_count: 2 x_train columns: ['PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 0.18329783267902763 Spearman Correlation: 0.177631574315487 Coefficient of Determination: 0.033598095464828726 RMSE: 0.6158600397779342 NRMSE: 0.09629583922725889 MAPE: 421.7415028466412 Pearson Correlation: -0.009235865571181707 Spearman Correlation: 0.05903074486559691 Coefficient of Determination: -0.05765850822737262 RMSE: 0.5107842080273322 NRMSE: 0.16834230045064008 MAPE: 189.99024772874114 Predictor: ElasticNet Pearson Correlation: 0.18329783267902766 Spearman Correlation: 0.177631574315487 Coefficient of Determination: 0.013646453068244635 RMSE: 0.6221848650051123 NRMSE: 0.09728478852397972 MAPE: 370.7585460922857 Pearson Correlation: -0.009235865571181693 Spearman Correlation: 0.05903074486559691 Coefficient of Determination: -0.012167258021483107 RMSE: 0.49967873821707637 NRMSE: 0.16468220229947805 MAPE: 168.6586419109317 Predictor: RandomForests Pearson Correlation: 0.1832978326790276 Spearman Correlation: 0.177631574315487 Coefficient of Determination: 0.033578769766642536 RMSE: 0.61586619760197 NRMSE: 0.09629680206425925 MAPE: 427.1116699865265 Pearson Correlation: -0.009235865571181707 Spearman Correlation: 0.05903074486559691 Coefficient of Determination: -0.058324044585877255 RMSE: 0.5109448893804891 NRMSE: 0.16839525719480886 MAPE: 191.74303140826885 Protein: BRCA2 x_train_column_count: 2 x_train columns: ['BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.00836154357269471 Spearman Correlation: 0.001764284599489143 Coefficient of Determination: 6.991541091805331e-05 RMSE: 0.19760431869645054 NRMSE: 0.12782808190680303 MAPE: 121.81067775752969 Pearson Correlation: -0.05641993307402194 Spearman Correlation: -0.06165472219409822 Coefficient of Determination: -0.0060525288165860225 RMSE: 0.18529287942832887 NRMSE: 0.1854412324142603 MAPE: 103.64568653339714 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: RandomForests Pearson Correlation: 0.004284771095526588 Spearman Correlation: -0.002367353237252141 Coefficient of Determination: 4.6455304337778e-06 RMSE: 0.19761076784724568 NRMSE: 0.1278322537922229 MAPE: 121.29580814379378 Pearson Correlation: -0.05641993307402198 Spearman Correlation: -0.06165472219409822 Coefficient of Determination: -0.005226570388692453 RMSE: 0.18521680206863478 NRMSE: 0.18536509414394997 MAPE: 103.62909587728892 Protein: CDKN2A x_train_column_count: 2 x_train columns: ['CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 0.12216973670858845 Spearman Correlation: 0.07471330494532356 Coefficient of Determination: 0.014925444567445934 RMSE: 0.6379003036335881 NRMSE: 0.14420714448594732 MAPE: 210.48980614791245 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008905591710993033 RMSE: 0.7501831688704012 NRMSE: 0.20258794730499627 MAPE: 453.44518810674543 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: RandomForests Pearson Correlation: 0.12216539159260781 Spearman Correlation: 0.07471330494532356 Coefficient of Determination: 0.014762116469522524 RMSE: 0.6379531842629859 NRMSE: 0.14421909896303511 MAPE: 210.60361709128816 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009063803700774642 RMSE: 0.7502419867222202 NRMSE: 0.2026038311429166 MAPE: 452.0369369114846 Protein: TP53 x_train_column_count: 2 x_train columns: ['TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.3398864220596162 Spearman Correlation: 0.35768121059759544 Coefficient of Determination: 0.11552277990048765 RMSE: 0.4258616321160981 NRMSE: 0.10234598224371501 MAPE: 670.49075052596 Pearson Correlation: 0.4583599002736805 Spearman Correlation: 0.4892664465658411 Coefficient of Determination: 0.200680995823173 RMSE: 0.37606952992953724 NRMSE: 0.13523302885020577 MAPE: 799.1813095895182 Predictor: ElasticNet Pearson Correlation: 0.33988642205961633 Spearman Correlation: 0.35768121059759544 Coefficient of Determination: 0.09893660318689301 RMSE: 0.4298360753283805 NRMSE: 0.10330114763960119 MAPE: 524.1362203914554 Pearson Correlation: 0.4583599002736805 Spearman Correlation: 0.4892664465658411 Coefficient of Determination: 0.15581916725222322 RMSE: 0.3864789294961421 NRMSE: 0.13897620536378227 MAPE: 643.5332568414525 Predictor: RandomForests Pearson Correlation: 0.33988642205961606 Spearman Correlation: 0.35768121059759544 Coefficient of Determination: 0.11552090891344025 RMSE: 0.4258620825410261 NRMSE: 0.10234609049291664 MAPE: 672.3182131754057 Pearson Correlation: 0.4583599002736805 Spearman Correlation: 0.4892664465658411 Coefficient of Determination: 0.20069051966031026 RMSE: 0.37606728950011836 NRMSE: 0.13523222320116451 MAPE: 801.5974240248415 Protein: CTNNB1 x_train_column_count: 2 x_train columns: ['CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4879440155768364e-05 RMSE: 0.7372406509033639 NRMSE: 0.14858630124823427 MAPE: 660.6430832277092 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01763093169040486 RMSE: 0.7575488846283525 NRMSE: 0.1879494081844769 MAPE: 324.6682321626286 Protein: CCNE1 x_train_column_count: 2 x_train columns: ['CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.05231116891756139 Spearman Correlation: 0.06785723531480779 Coefficient of Determination: 0.002736458393521546 RMSE: 0.4830089339783268 NRMSE: 0.11656464849731564 MAPE: 119.5427173356756 Pearson Correlation: 0.13599169774339415 Spearman Correlation: 0.14852213144650117 Coefficient of Determination: 0.002924234816228166 RMSE: 0.5362542288757939 NRMSE: 0.19100773958176095 MAPE: 84.94145302069248 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: RandomForests Pearson Correlation: 0.05227690286770583 Spearman Correlation: 0.06785723531480779 Coefficient of Determination: 0.0027127605046304293 RMSE: 0.48301467279438426 NRMSE: 0.11656603344701215 MAPE: 119.40394256808129 Pearson Correlation: 0.13599169774339417 Spearman Correlation: 0.14852213144650117 Coefficient of Determination: 0.002908973606104426 RMSE: 0.5362583328052228 NRMSE: 0.19100920135537766 MAPE: 84.88849253425528 Protein: CCND1 x_train_column_count: 2 x_train columns: ['CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 0.036702519479310906 Spearman Correlation: 0.04736784481881931 Coefficient of Determination: 0.0013470749361291778 RMSE: 0.23873304822159472 NRMSE: 0.14351940473337746 MAPE: 406.7517363727273 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0007232695358412311 RMSE: 0.23503226970741464 NRMSE: 0.16739236347459877 MAPE: 1316.2413900895822 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: RandomForests Pearson Correlation: 0.036702519479310934 Spearman Correlation: 0.04736784481881931 Coefficient of Determination: 0.0010183252881642568 RMSE: 0.23877233962384517 NRMSE: 0.14354302558815282 MAPE: 402.5030783880826 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012263884813286108 RMSE: 0.23509134414508534 NRMSE: 0.16743443688756007 MAPE: 1301.1044939031985 Protein: ERBB2 x_train_column_count: 2 x_train columns: ['ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 0.025686368899921277 Spearman Correlation: 0.00015077600799019044 Coefficient of Determination: 0.0006597895472626458 RMSE: 1.018800818950255 NRMSE: 0.1735694871884858 MAPE: 630.1186414779742 Pearson Correlation: -0.11267493751979588 Spearman Correlation: -0.1598979374904719 Coefficient of Determination: -0.03035268311739059 RMSE: 0.9207031421251881 NRMSE: 0.17072188802617988 MAPE: 539.6831276353646 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: RandomForests Pearson Correlation: 0.025686368899921323 Spearman Correlation: 0.00015077600799019044 Coefficient of Determination: 0.0006501682836426159 RMSE: 1.018805723249892 NRMSE: 0.17357032271664513 MAPE: 630.7344573913934 Pearson Correlation: -0.11267493751979579 Spearman Correlation: -0.1598979374904719 Coefficient of Determination: -0.029755000921016794 RMSE: 0.9204360647882365 NRMSE: 0.17067236506364483 MAPE: 540.250131695562 Protein: ERBB3 x_train_column_count: 2 x_train columns: ['ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.03113033716083052 Spearman Correlation: 0.021862521158577612 Coefficient of Determination: 0.0009690978917471504 RMSE: 0.4589155983345312 NRMSE: 0.12384814836836655 MAPE: 218.80004412992048 Pearson Correlation: -0.0586802611571753 Spearman Correlation: -0.08338815222230238 Coefficient of Determination: -0.009174129518926932 RMSE: 0.46764957027582493 NRMSE: 0.18764829315767242 MAPE: 257.964602817957 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: RandomForests Pearson Correlation: 0.03113033716083052 Spearman Correlation: 0.021862521158577612 Coefficient of Determination: 0.0009389870442200188 RMSE: 0.4589225141533814 NRMSE: 0.123850014749379 MAPE: 218.59142501078904 Pearson Correlation: -0.058680261157175354 Spearman Correlation: -0.08338815222230238 Coefficient of Determination: -0.009989620582195213 RMSE: 0.4678384807038275 NRMSE: 0.18772409504358767 MAPE: 257.81951281724554 Fold: 2 Protein: RB1 x_train_column_count: 2 x_train columns: ['RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.07493991042656188 Spearman Correlation: 0.0973575785595697 Coefficient of Determination: 0.005615990174741348 RMSE: 0.23438021429035144 NRMSE: 0.08571540897101794 MAPE: 183.62933429272687 Pearson Correlation: -0.010163767694709447 Spearman Correlation: 0.022419871640982386 Coefficient of Determination: -0.029331745730235115 RMSE: 0.24846981000505158 NRMSE: 0.14235531276429259 MAPE: 229.2202915746116 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: RandomForests Pearson Correlation: 0.07493991042656191 Spearman Correlation: 0.0973575785595697 Coefficient of Determination: 0.005600899306984153 RMSE: 0.2343819927719865 NRMSE: 0.08571605938121216 MAPE: 181.81976781160142 Pearson Correlation: -0.010163767694709426 Spearman Correlation: 0.022419871640982386 Coefficient of Determination: -0.029776525007611854 RMSE: 0.24852348671673716 NRMSE: 0.1423860656556801 MAPE: 226.4164088808496 Protein: CDH1 x_train_column_count: 2 x_train columns: ['CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.5485562400137963 Spearman Correlation: 0.4319584666820389 Coefficient of Determination: 0.30091394845807395 RMSE: 0.9369467364481152 NRMSE: 0.1503082917218441 MAPE: 214.32421437632655 Pearson Correlation: 0.519775414794736 Spearman Correlation: 0.47856537945405553 Coefficient of Determination: 0.2213142316716118 RMSE: 1.0153435362109877 NRMSE: 0.1803131834862347 MAPE: 201.41698707965716 Predictor: ElasticNet Pearson Correlation: 0.5485562400137961 Spearman Correlation: 0.4319584666820389 Coefficient of Determination: 0.2214415399944173 RMSE: 0.9887698116975066 NRMSE: 0.15862193177147774 MAPE: 323.9573336263983 Pearson Correlation: 0.519775414794736 Spearman Correlation: 0.47856537945405553 Coefficient of Determination: 0.18073678137637816 RMSE: 1.0414624556013221 NRMSE: 0.1849515992898814 MAPE: 195.06328305153517 Predictor: RandomForests Pearson Correlation: 0.5485562400137963 Spearman Correlation: 0.4319584666820389 Coefficient of Determination: 0.30090523737200314 RMSE: 0.9369525739256487 NRMSE: 0.15030922819052678 MAPE: 212.8070461692139 Pearson Correlation: 0.519775414794736 Spearman Correlation: 0.47856537945405553 Coefficient of Determination: 0.2203110533936472 RMSE: 1.0159973575452728 NRMSE: 0.1804292945383187 MAPE: 201.46387341522617 Protein: CDH2 x_train_column_count: 2 x_train columns: ['CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.00966837745409605 Spearman Correlation: -0.014574347619589803 Coefficient of Determination: 9.347752259480924e-05 RMSE: 0.3680810813154511 NRMSE: 0.13337237528641607 MAPE: 309.90185161189123 Pearson Correlation: 0.021873017635778782 Spearman Correlation: 0.025908433760141823 Coefficient of Determination: 0.0001908977591903449 RMSE: 0.3870434292111375 NRMSE: 0.20390345923238568 MAPE: 139.1305974797939 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: RandomForests Pearson Correlation: 0.00966665060225201 Spearman Correlation: -0.014574347619589803 Coefficient of Determination: 8.398185806068881e-05 RMSE: 0.36808282906191186 NRMSE: 0.13337300857377776 MAPE: 278.7788906599385 Pearson Correlation: 0.021873017635778803 Spearman Correlation: 0.025908433760141823 Coefficient of Determination: 0.00012518715676446135 RMSE: 0.387056147858614 NRMSE: 0.20391015971099216 MAPE: 137.2675521778066 Protein: CDH3 x_train_column_count: 2 x_train columns: ['CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.06738168699390433 Spearman Correlation: 0.07319563217509217 Coefficient of Determination: 0.004540291742144542 RMSE: 0.2072346456456892 NRMSE: 0.15596445150308125 MAPE: 125.3990502998322 Pearson Correlation: -0.0015043208869745808 Spearman Correlation: 0.045636169426003764 Coefficient of Determination: -0.15826356728039115 RMSE: 0.21301482420002052 NRMSE: 0.17527756455197938 MAPE: 245.95249080169964 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: RandomForests Pearson Correlation: 0.06737736912581124 Spearman Correlation: 0.06531743593265528 Coefficient of Determination: 0.004534033828649919 RMSE: 0.20723529703038943 NRMSE: 0.15596494173412911 MAPE: 123.93173737298564 Pearson Correlation: -0.0023295404767150274 Spearman Correlation: -0.07142471221591798 Coefficient of Determination: -0.15642369221160335 RMSE: 0.21284557238273813 NRMSE: 0.1751382970317931 MAPE: 239.36305928885497 Protein: PTEN x_train_column_count: 2 x_train columns: ['PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.14649888314892473 Spearman Correlation: 0.13741341982664848 Coefficient of Determination: 0.02146192276388248 RMSE: 0.6170198841176536 NRMSE: 0.09647719241930319 MAPE: 300.5745849451177 Pearson Correlation: 0.18995018705897754 Spearman Correlation: 0.2021876262271564 Coefficient of Determination: 0.03430765418480353 RMSE: 0.5027771558484756 NRMSE: 0.1686266286049355 MAPE: 533.769636749815 Predictor: ElasticNet Pearson Correlation: 0.14649888314892484 Spearman Correlation: 0.13741341982664848 Coefficient of Determination: 0.006272596669845809 RMSE: 0.6217902790637534 NRMSE: 0.09722309108963387 MAPE: 270.6336881919587 Pearson Correlation: 0.18995018705897754 Spearman Correlation: 0.2021876262271564 Coefficient of Determination: 0.012171642273891559 RMSE: 0.5085069429559986 NRMSE: 0.17054834416286513 MAPE: 477.77683878410545 Predictor: RandomForests Pearson Correlation: 0.1464988831489249 Spearman Correlation: 0.13741341982664848 Coefficient of Determination: 0.021425217395090734 RMSE: 0.6170314563449107 NRMSE: 0.09647900185206953 MAPE: 304.88703296351025 Pearson Correlation: 0.1899501870589775 Spearman Correlation: 0.2021876262271564 Coefficient of Determination: 0.03356030084752004 RMSE: 0.5029716688919064 NRMSE: 0.16869186641129139 MAPE: 542.5261385646801 Protein: BRCA2 x_train_column_count: 2 x_train columns: ['BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.015890370249822004 Spearman Correlation: 0.010800485439201962 Coefficient of Determination: 0.0002525038666763013 RMSE: 0.19529973380164686 NRMSE: 0.12581719040209172 MAPE: 125.2799300846512 Pearson Correlation: -0.028048020868183154 Spearman Correlation: -0.0663192021772592 Coefficient of Determination: -0.020832787899246696 RMSE: 0.19518970169672792 NRMSE: 0.1321232911378825 MAPE: 115.77676545024997 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: RandomForests Pearson Correlation: 0.015595873430078214 Spearman Correlation: 0.010800485439201962 Coefficient of Determination: 0.00023369939270401208 RMSE: 0.19530157051116911 NRMSE: 0.125818373658347 MAPE: 125.47054570001572 Pearson Correlation: -0.03882035951465647 Spearman Correlation: -0.0663192021772592 Coefficient of Determination: -0.019753989005618422 RMSE: 0.195086537839742 NRMSE: 0.13205345984968964 MAPE: 115.8572535121408 Protein: CDKN2A x_train_column_count: 2 x_train columns: ['CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.08832365843184885 Spearman Correlation: 0.06326569441898067 Coefficient of Determination: 0.007801068638785935 RMSE: 0.6607525376262674 NRMSE: 0.1493732423705815 MAPE: 286.90607768832785 Pearson Correlation: 0.1579982006802785 Spearman Correlation: 0.0842597927362006 Coefficient of Determination: 0.019702422449212387 RMSE: 0.6667651848267954 NRMSE: 0.18012891312589024 MAPE: 249.75017770095448 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: RandomForests Pearson Correlation: 0.08821332588467808 Spearman Correlation: 0.06326569441898067 Coefficient of Determination: 0.007533997736242637 RMSE: 0.6608414592616434 NRMSE: 0.14939334446968314 MAPE: 289.7534751727355 Pearson Correlation: 0.1604029345879188 Spearman Correlation: 0.0842597927362006 Coefficient of Determination: 0.01795306387888629 RMSE: 0.6673598468510924 NRMSE: 0.18028956312164804 MAPE: 248.59027314123563 Protein: TP53 x_train_column_count: 2 x_train columns: ['TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 0.37646766435611223 Spearman Correlation: 0.398422249440095 Coefficient of Determination: 0.1417279023057465 RMSE: 0.4218241425813957 NRMSE: 0.11298356571083319 MAPE: 451.07517214892493 Pearson Correlation: 0.30494792667970094 Spearman Correlation: 0.33789773193637773 Coefficient of Determination: 0.07272307983748783 RMSE: 0.39421672377157096 NRMSE: 0.1298260246242618 MAPE: 1942.5434992598734 Predictor: ElasticNet Pearson Correlation: 0.3764676643561125 Spearman Correlation: 0.398422249440095 Coefficient of Determination: 0.12268964463905574 RMSE: 0.42647694965493976 NRMSE: 0.11422979768446224 MAPE: 344.1589960199698 Pearson Correlation: 0.30494792667970105 Spearman Correlation: 0.33789773193637773 Coefficient of Determination: 0.0835431841074672 RMSE: 0.3919099790486638 NRMSE: 0.12906635239541045 MAPE: 1553.0343530002715 Predictor: RandomForests Pearson Correlation: 0.37646766435611234 Spearman Correlation: 0.398422249440095 Coefficient of Determination: 0.14171832787260652 RMSE: 0.4218264953992244 NRMSE: 0.11298419590176093 MAPE: 449.89317869716155 Pearson Correlation: 0.304947926679701 Spearman Correlation: 0.33789773193637773 Coefficient of Determination: 0.07291667834297044 RMSE: 0.3941755689930692 NRMSE: 0.129812471263978 MAPE: 1941.9705460877076 Protein: CTNNB1 x_train_column_count: 2 x_train columns: ['CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.002141800797513912 Spearman Correlation: -0.00039441663395970973 Coefficient of Determination: 4.587310656334331e-06 RMSE: 0.7249819239414711 NRMSE: 0.1426006931434837 MAPE: 627.9318767857546 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11748042983743279 RMSE: 0.810310559792873 NRMSE: 0.20166510534652526 MAPE: 279.16622638076416 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: RandomForests Pearson Correlation: 0.002141800797513916 Spearman Correlation: -0.00039441663395970973 Coefficient of Determination: -6.618295338767233e-05 RMSE: 0.7250075771863791 NRMSE: 0.1426057390217111 MAPE: 627.7429933530207 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11767452677349444 RMSE: 0.810380928796127 NRMSE: 0.20168261835099352 MAPE: 279.05981327265346 Protein: CCNE1 x_train_column_count: 2 x_train columns: ['CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.07420730450328121 Spearman Correlation: 0.0996840207349156 Coefficient of Determination: 0.005506724041642652 RMSE: 0.5113830198204319 NRMSE: 0.12341217265256459 MAPE: 119.09086859036553 Pearson Correlation: 0.06574685842975651 Spearman Correlation: 0.10418716683560529 Coefficient of Determination: 0.0027256573226791536 RMSE: 0.41770290133623245 NRMSE: 0.22701368014838802 MAPE: 82.14484526974964 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: RandomForests Pearson Correlation: 0.07420730450328139 Spearman Correlation: 0.0996840207349156 Coefficient of Determination: 0.005453640118453951 RMSE: 0.511396667904013 NRMSE: 0.12341546634747036 MAPE: 118.86223438781687 Pearson Correlation: 0.06574685842975653 Spearman Correlation: 0.10418716683560529 Coefficient of Determination: 0.0033666135664930374 RMSE: 0.41756864925384035 NRMSE: 0.22694071666359078 MAPE: 82.03254494672801 Protein: CCND1 x_train_column_count: 2 x_train columns: ['CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.03688744465841998 Spearman Correlation: 0.047925113581393654 Coefficient of Determination: 0.001360683573428001 RMSE: 0.23858152371972915 NRMSE: 0.1434283125847526 MAPE: 628.2760046363436 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002094186232574735 RMSE: 0.23567600809461195 NRMSE: 0.18233274129991023 MAPE: 419.93558657018133 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: RandomForests Pearson Correlation: 0.03688744465841978 Spearman Correlation: 0.047925113581393654 Coefficient of Determination: 0.0010378303890593576 RMSE: 0.2386200864815018 NRMSE: 0.14345149540194407 MAPE: 621.7564092208689 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028504300923439807 RMSE: 0.23576491935839652 NRMSE: 0.182401528252767 MAPE: 415.77110265207483 Protein: ERBB2 x_train_column_count: 2 x_train columns: ['ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.014593402089413064 Spearman Correlation: 0.048989782081182286 Coefficient of Determination: 0.00021296738454323894 RMSE: 0.9829040449941453 NRMSE: 0.17639108536764805 MAPE: 402.73255618457375 Pearson Correlation: -0.09053726554389235 Spearman Correlation: -0.09282820720411765 Coefficient of Determination: -0.010839390858995879 RMSE: 1.0629158669283059 NRMSE: 0.1810852116681101 MAPE: 1332.282165289183 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: RandomForests Pearson Correlation: 0.01459340208941305 Spearman Correlation: 0.048989782081182286 Coefficient of Determination: 0.0001941400612844868 RMSE: 0.9829132996476184 NRMSE: 0.17639274619952594 MAPE: 398.3206643787235 Pearson Correlation: -0.09053726554389245 Spearman Correlation: -0.09282820720411765 Coefficient of Determination: -0.010418093550757623 RMSE: 1.0626943429818438 NRMSE: 0.18104747141793343 MAPE: 1316.0306215483156 Protein: ERBB3 x_train_column_count: 2 x_train columns: ['ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.021820010638129203 Spearman Correlation: 0.024703396623160463 Coefficient of Determination: 0.0004761128642480905 RMSE: 0.44502707927064794 NRMSE: 0.1201000356960515 MAPE: 215.61348003873397 Pearson Correlation: -0.10787106515581273 Spearman Correlation: -0.06825429875084643 Coefficient of Determination: -0.007208185153779301 RMSE: 0.5196382465036954 NRMSE: 0.19177744474392636 MAPE: 280.78881011663157 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: RandomForests Pearson Correlation: 0.021820010638129186 Spearman Correlation: 0.024703396623160463 Coefficient of Determination: 0.00047243315497413896 RMSE: 0.4450278984450492 NRMSE: 0.12010025676771076 MAPE: 216.08224548678652 Pearson Correlation: -0.1078710651558127 Spearman Correlation: -0.06825429875084643 Coefficient of Determination: -0.0066663898223016105 RMSE: 0.5194984663413732 NRMSE: 0.19172585754352992 MAPE: 281.37213756290856 Fold: 3 Protein: RB1 x_train_column_count: 2 x_train columns: ['RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.03703167872009073 Spearman Correlation: 0.06304564543134221 Coefficient of Determination: 0.0013713452288279804 RMSE: 0.24041612874019389 NRMSE: 0.08792280893073211 MAPE: 208.43942308358447 Pearson Correlation: 0.12078720126665377 Spearman Correlation: 0.1485140502075635 Coefficient of Determination: -0.02236487262901732 RMSE: 0.22413012055939233 NRMSE: 0.15726884415523548 MAPE: 175.07373113676002 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: RandomForests Pearson Correlation: 0.03703167872009072 Spearman Correlation: 0.06304564543134221 Coefficient of Determination: 0.001352979571878965 RMSE: 0.24041833946177882 NRMSE: 0.0879236174158056 MAPE: 203.82979707244178 Pearson Correlation: 0.12078720126665377 Spearman Correlation: 0.1485140502075635 Coefficient of Determination: -0.020728423442185173 RMSE: 0.22395067168960098 NRMSE: 0.15714292749456263 MAPE: 171.38279081544428 Protein: CDH1 x_train_column_count: 2 x_train columns: ['CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.5317599777754428 Spearman Correlation: 0.45249385314101315 Coefficient of Determination: 0.28276867396374017 RMSE: 0.994854810285312 NRMSE: 0.15841132611784844 MAPE: 306.9045657587191 Pearson Correlation: 0.6098062477834043 Spearman Correlation: 0.4065859651828245 Coefficient of Determination: 0.3532446041194719 RMSE: 0.7571967623603754 NRMSE: 0.14886107859088102 MAPE: 169.5532554276139 Predictor: ElasticNet Pearson Correlation: 0.531759977775443 Spearman Correlation: 0.45249385314101315 Coefficient of Determination: 0.22123996082910635 RMSE: 1.036649418635584 NRMSE: 0.16506630658825894 MAPE: 415.2735461621006 Pearson Correlation: 0.6098062477834045 Spearman Correlation: 0.4065859651828245 Coefficient of Determination: 0.24156923940695518 RMSE: 0.8199675911227783 NRMSE: 0.16120150810419107 MAPE: 223.45306083940608 Predictor: RandomForests Pearson Correlation: 0.5317599777754424 Spearman Correlation: 0.45249385314101315 Coefficient of Determination: 0.2827042546525511 RMSE: 0.9948994865426858 NRMSE: 0.1584184399450154 MAPE: 311.6202855879139 Pearson Correlation: 0.6098062477834043 Spearman Correlation: 0.4065859651828245 Coefficient of Determination: 0.3525736616003955 RMSE: 0.7575894176176804 NRMSE: 0.14893827264138726 MAPE: 171.63457149888032 Protein: CDH2 x_train_column_count: 2 x_train columns: ['CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.013154727903384646 Spearman Correlation: -0.003922455154588096 Coefficient of Determination: 0.00017304686621211207 RMSE: 0.38120497929463865 NRMSE: 0.13812775537888206 MAPE: 134.16162718764423 Pearson Correlation: 0.0073672732940825575 Spearman Correlation: 0.009670338274985611 Coefficient of Determination: -0.0023858659712145958 RMSE: 0.332374230498254 NRMSE: 0.175129212857638 MAPE: 637.0547085403624 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: RandomForests Pearson Correlation: 0.013154081246152322 Spearman Correlation: -0.003922455154588096 Coefficient of Determination: 0.00017078183032148697 RMSE: 0.38120541109059497 NRMSE: 0.13812791183802992 MAPE: 155.6254449160986 Pearson Correlation: 0.007367273294082549 Spearman Correlation: 0.009670338274985611 Coefficient of Determination: -0.002475805553036281 RMSE: 0.3323891413872587 NRMSE: 0.1751370694602708 MAPE: 633.7055471179159 Protein: CDH3 x_train_column_count: 2 x_train columns: ['CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.05301364262245149 Spearman Correlation: 0.06303647825399615 Coefficient of Determination: 0.0028104463041009886 RMSE: 0.21221186817621748 NRMSE: 0.14888299669993368 MAPE: 108.10746286709174 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003055840371753993 RMSE: 0.18861580200643732 NRMSE: 0.1640608191971934 MAPE: 99.74207679202581 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: RandomForests Pearson Correlation: 0.05292371587174162 Spearman Correlation: 0.06303647825399615 Coefficient of Determination: 0.0027896724255145333 RMSE: 0.21221407860883193 NRMSE: 0.14888454748893748 MAPE: 111.31157766644613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0027273673770256135 RMSE: 0.18858491625320825 NRMSE: 0.1640339543114183 MAPE: 99.84753648236857 Protein: PTEN x_train_column_count: 2 x_train columns: ['PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 0.160834821068392 Spearman Correlation: 0.15662891744604301 Coefficient of Determination: 0.025867839668101578 RMSE: 0.6211017482137907 NRMSE: 0.09711543244684398 MAPE: 356.6749319315744 Pearson Correlation: 0.10292835199005702 Spearman Correlation: 0.17444515614794506 Coefficient of Determination: -0.05599225794470408 RMSE: 0.4839638535625379 NRMSE: 0.11570885419656145 MAPE: 110.5490893321373 Predictor: ElasticNet Pearson Correlation: 0.16083482106839195 Spearman Correlation: 0.15662891744604301 Coefficient of Determination: 0.0097306870569559 RMSE: 0.6262251009461415 NRMSE: 0.09791651957566123 MAPE: 310.5697283946561 Pearson Correlation: 0.10292835199005702 Spearman Correlation: 0.17444515614794506 Coefficient of Determination: -0.05561715385517241 RMSE: 0.4838778903638039 NRMSE: 0.11568830162191075 MAPE: 95.24026927707216 Predictor: RandomForests Pearson Correlation: 0.16083482106839167 Spearman Correlation: 0.15662891744604301 Coefficient of Determination: 0.025855137112191784 RMSE: 0.6211057977433535 NRMSE: 0.09711606563104581 MAPE: 359.2482204302659 Pearson Correlation: 0.10292835199005702 Spearman Correlation: 0.17444515614794506 Coefficient of Determination: -0.05609896124246494 RMSE: 0.48398830413702754 NRMSE: 0.11571469998016247 MAPE: 111.08095391822688 Protein: BRCA2 x_train_column_count: 2 x_train columns: ['BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.029061336942103107 Spearman Correlation: 0.03414135188303217 Coefficient of Determination: 0.0008445613048622125 RMSE: 0.18996987740113633 NRMSE: 0.12803620454070602 MAPE: 122.37868262622042 Pearson Correlation: -0.12943193351058485 Spearman Correlation: -0.14010450986840786 Coefficient of Determination: -0.007840269840893033 RMSE: 0.21496920443446724 NRMSE: 0.14785795654036224 MAPE: 117.44803384818651 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: RandomForests Pearson Correlation: 0.027932696035536168 Spearman Correlation: 0.03030289603929361 Coefficient of Determination: 0.0007714241580560888 RMSE: 0.18997683007337807 NRMSE: 0.1280408905139636 MAPE: 121.24326551160746 Pearson Correlation: -0.1294319335105849 Spearman Correlation: -0.14010450986840786 Coefficient of Determination: -0.007139066826480134 RMSE: 0.21489440920820535 NRMSE: 0.14780651163994893 MAPE: 116.37784703048968 Protein: CDKN2A x_train_column_count: 2 x_train columns: ['CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.07482646269170574 Spearman Correlation: 0.047694209099405804 Coefficient of Determination: 0.005598999518953152 RMSE: 0.665716527958145 NRMSE: 0.1554250392132389 MAPE: 308.5677523739537 Pearson Correlation: 0.2032851394009494 Spearman Correlation: 0.14682952634209145 Coefficient of Determination: 0.027711035809720563 RMSE: 0.6473805865808312 NRMSE: 0.19986434089124486 MAPE: 177.5499412345267 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: RandomForests Pearson Correlation: 0.07481744062508164 Spearman Correlation: 0.047694209099405804 Coefficient of Determination: 0.005477160562283312 RMSE: 0.6657573101590933 NRMSE: 0.15543456064603411 MAPE: 307.1221880475941 Pearson Correlation: 0.20328513940094917 Spearman Correlation: 0.14682952634209145 Coefficient of Determination: 0.024449730383268142 RMSE: 0.6484654175292855 NRMSE: 0.2001992582906627 MAPE: 177.01160324429225 Protein: TP53 x_train_column_count: 2 x_train columns: ['TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.37751141903369606 Spearman Correlation: 0.3935213563070349 Coefficient of Determination: 0.14251487150083508 RMSE: 0.41680667685312983 NRMSE: 0.10016983341819992 MAPE: 769.0790036908394 Pearson Correlation: 0.31118407941499016 Spearman Correlation: 0.37148201997374525 Coefficient of Determination: 0.06876293906399544 RMSE: 0.4153853355207214 NRMSE: 0.15489685068770864 MAPE: 451.8527057950918 Predictor: ElasticNet Pearson Correlation: 0.3775114190336964 Spearman Correlation: 0.3935213563070349 Coefficient of Determination: 0.12284669622590849 RMSE: 0.42155973293263826 NRMSE: 0.10131212038756028 MAPE: 601.0444854661916 Pearson Correlation: 0.31118407941499016 Spearman Correlation: 0.37148201997374525 Coefficient of Determination: 0.07778456656840549 RMSE: 0.4133683560172633 NRMSE: 0.15414472068630725 MAPE: 316.05499218464274 Predictor: RandomForests Pearson Correlation: 0.37751141903369606 Spearman Correlation: 0.3935213563070349 Coefficient of Determination: 0.14249359118461147 RMSE: 0.4168118487928888 NRMSE: 0.10017107637416219 MAPE: 763.4527752692932 Pearson Correlation: 0.31118407941499016 Spearman Correlation: 0.37148201997374525 Coefficient of Determination: 0.06977987575474476 RMSE: 0.415158467415394 NRMSE: 0.1548122517574343 MAPE: 447.3607543308377 Protein: CTNNB1 x_train_column_count: 2 x_train columns: ['CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.0030751482382669 Spearman Correlation: 0.004916451172084541 Coefficient of Determination: 9.456536687491024e-06 RMSE: 0.7691938033198997 NRMSE: 0.15129697154207314 MAPE: 444.9966470442489 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00867771156986219 RMSE: 0.6156242164399576 NRMSE: 0.20125673164861796 MAPE: 1384.4161474808502 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: RandomForests Pearson Correlation: -0.0030751482382669203 Spearman Correlation: -0.004916451172084541 Coefficient of Determination: -9.450158307666712e-05 RMSE: 0.7692337846296797 NRMSE: 0.15130483568640438 MAPE: 448.42069271690673 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009997751836325897 RMSE: 0.6160269134779416 NRMSE: 0.20138837931215192 MAPE: 1395.4972304120372 Protein: CCNE1 x_train_column_count: 2 x_train columns: ['CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.07225890269422985 Spearman Correlation: 0.07736947452467563 Coefficient of Determination: 0.005221349018574406 RMSE: 0.5210573193022984 NRMSE: 0.1257468733987254 MAPE: 105.42922708555784 Pearson Correlation: 0.07812502788834241 Spearman Correlation: 0.11992946044735714 Coefficient of Determination: -0.005907224987138138 RMSE: 0.36596478510465996 NRMSE: 0.15941315725254168 MAPE: 132.7428861364911 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: RandomForests Pearson Correlation: 0.07223100066721029 Spearman Correlation: 0.07736947452467563 Coefficient of Determination: 0.005203596810364197 RMSE: 0.5210619685158424 NRMSE: 0.1257479953944162 MAPE: 105.48183569859285 Pearson Correlation: 0.07812502788834244 Spearman Correlation: 0.11992946044735714 Coefficient of Determination: -0.005210611367678641 RMSE: 0.3658380436916572 NRMSE: 0.15935794907507828 MAPE: 132.82320452064232 Protein: CCND1 x_train_column_count: 2 x_train columns: ['CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796535 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.97448412250054 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.4116478916667035e-06 RMSE: 0.24465690258910402 NRMSE: 0.14708065466875717 MAPE: 622.5870209040851 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0008938093409120995 RMSE: 0.20983330328280636 NRMSE: 0.19883193245980532 MAPE: 469.34659613783066 Protein: ERBB2 x_train_column_count: 2 x_train columns: ['ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 0.0027965800573538277 Spearman Correlation: -0.031214782047203467 Coefficient of Determination: 7.820860017382358e-06 RMSE: 0.981231181417275 NRMSE: 0.16716888110419187 MAPE: 604.5497180650914 Pearson Correlation: -0.0015489477818765977 Spearman Correlation: -0.018139143253720007 Coefficient of Determination: -0.0038841815942871616 RMSE: 1.0686104544611728 NRMSE: 0.1927647114620775 MAPE: 271.86291488388247 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: RandomForests Pearson Correlation: 0.0027965800573538286 Spearman Correlation: -0.031214782047203467 Coefficient of Determination: -9.654810548820336e-06 RMSE: 0.9812397552833094 NRMSE: 0.16717034180338167 MAPE: 599.4707439174655 Pearson Correlation: -0.0015489477818766014 Spearman Correlation: -0.018139143253720007 Coefficient of Determination: -0.004296752420684946 RMSE: 1.0688300177426382 NRMSE: 0.19280431808619639 MAPE: 269.93463585795945 Protein: ERBB3 x_train_column_count: 2 x_train columns: ['ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.025873898734873887 Spearman Correlation: 0.00342501533885403 Coefficient of Determination: 0.0006694586357424148 RMSE: 0.4508533973358105 NRMSE: 0.16347884321444103 MAPE: 237.77891692081775 Pearson Correlation: 0.003259190884356853 Spearman Correlation: 0.019849641722338884 Coefficient of Determination: -0.01582809460001733 RMSE: 0.49862163306944335 NRMSE: 0.13863116231860523 MAPE: 161.4502301605969 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: RandomForests Pearson Correlation: 0.025873898734873887 Spearman Correlation: 0.00342501533885403 Coefficient of Determination: 0.0006665254779996133 RMSE: 0.45085405899034225 NRMSE: 0.1634790831294957 MAPE: 237.232685809151 Pearson Correlation: 0.0032591908843568416 Spearman Correlation: 0.019849641722338884 Coefficient of Determination: -0.015979395719386558 RMSE: 0.4986587649437652 NRMSE: 0.1386414860481727 MAPE: 161.16951782680897 Fold: 4 Protein: RB1 x_train_column_count: 2 x_train columns: ['RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.028251025040665876 Spearman Correlation: 0.04790792506620437 Coefficient of Determination: 0.000798120415848369 RMSE: 0.25141045045033156 NRMSE: 0.09194355268078246 MAPE: 142.16129834709255 Pearson Correlation: 0.17661141723099724 Spearman Correlation: 0.18932707163864965 Coefficient of Determination: -0.054772250082753215 RMSE: 0.16933764438903676 NRMSE: 0.1622443226047568 MAPE: 99.36227293056196 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: RandomForests Pearson Correlation: 0.028251025040665904 Spearman Correlation: 0.04790792506620437 Coefficient of Determination: 0.0007742716781427017 RMSE: 0.2514134507379789 NRMSE: 0.09194464991880445 MAPE: 136.1687402094161 Pearson Correlation: 0.17661141723099733 Spearman Correlation: 0.18932707163864965 Coefficient of Determination: -0.05853645273565866 RMSE: 0.16963953587596944 NRMSE: 0.16253356827115456 MAPE: 98.75591146720659 Protein: CDH1 x_train_column_count: 2 x_train columns: ['CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 0.5289831929520881 Spearman Correlation: 0.45040702939291893 Coefficient of Determination: 0.2798232184257863 RMSE: 0.9496291370685895 NRMSE: 0.15121001513782834 MAPE: 333.88291896838405 Pearson Correlation: 0.6162672398551103 Spearman Correlation: 0.40269259139222563 Coefficient of Determination: 0.3074766075217744 RMSE: 0.9706938544229087 NRMSE: 0.17609917173232262 MAPE: 216.38253036837133 Predictor: ElasticNet Pearson Correlation: 0.5289831929520893 Spearman Correlation: 0.45040702939291893 Coefficient of Determination: 0.21776706015092517 RMSE: 0.9896976149628564 NRMSE: 0.15759014282393177 MAPE: 433.20214077672716 Pearson Correlation: 0.6162672398551103 Spearman Correlation: 0.40269259139222563 Coefficient of Determination: 0.17901757293330356 RMSE: 1.0568953490621293 NRMSE: 0.19173748214181802 MAPE: 287.85603866817587 Predictor: RandomForests Pearson Correlation: 0.5289831929520885 Spearman Correlation: 0.45040702939291893 Coefficient of Determination: 0.27972491299877733 RMSE: 0.9496939479002412 NRMSE: 0.151220335005293 MAPE: 339.80653801550073 Pearson Correlation: 0.6162672398551101 Spearman Correlation: 0.40269259139222563 Coefficient of Determination: 0.30697945249495606 RMSE: 0.9710422172037553 NRMSE: 0.17616237023398196 MAPE: 219.77667377412078 Protein: CDH2 x_train_column_count: 2 x_train columns: ['CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.03010483884052025 Spearman Correlation: 0.01902259079406521 Coefficient of Determination: 0.0009063013216136229 RMSE: 0.3791915873860672 NRMSE: 0.13739821269152375 MAPE: 503.44593080350074 Pearson Correlation: -0.06782633649554896 Spearman Correlation: -0.10354765953166792 Coefficient of Determination: -0.06301174273986687 RMSE: 0.34360651112891755 NRMSE: 0.17725563902073663 MAPE: 138.5175551174038 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: RandomForests Pearson Correlation: 0.030090451427318435 Spearman Correlation: 0.01902259079406521 Coefficient of Determination: 0.0009043882517715263 RMSE: 0.3791919504249113 NRMSE: 0.13739834423686909 MAPE: 512.6842307970973 Pearson Correlation: -0.06782633649554902 Spearman Correlation: -0.10354765953166792 Coefficient of Determination: -0.06266880526381513 RMSE: 0.34355108132970286 NRMSE: 0.17722704455537475 MAPE: 139.2736305678542 Protein: CDH3 x_train_column_count: 2 x_train columns: ['CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.05564353475787721 Spearman Correlation: 0.06659204168563214 Coefficient of Determination: 0.0030962029603509578 RMSE: 0.20559105888812532 NRMSE: 0.1465221281469599 MAPE: 177.49436314211053 Pearson Correlation: 0.022250444890147807 Spearman Correlation: 0.06316703799617795 Coefficient of Determination: -0.10404584622603275 RMSE: 0.21833891267928798 NRMSE: 0.19433123224743928 MAPE: 210.71621112095093 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: RandomForests Pearson Correlation: 0.05557818389999524 Spearman Correlation: 0.06659204168563214 Coefficient of Determination: 0.003055823648245526 RMSE: 0.20559522255040424 NRMSE: 0.14652509553601512 MAPE: 182.8695704648601 Pearson Correlation: 0.025694659631079468 Spearman Correlation: 0.06316703799617795 Coefficient of Determination: -0.10615236755195512 RMSE: 0.21854710892267548 NRMSE: 0.1945165360580624 MAPE: 217.6606052280289 Protein: PTEN x_train_column_count: 2 x_train columns: ['PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 0.0802570151710381 Spearman Correlation: 0.11695247382987448 Coefficient of Determination: 0.006441188484164195 RMSE: 0.5599690988425468 NRMSE: 0.10831961831525587 MAPE: 289.457775557982 Pearson Correlation: 0.34666030928339486 Spearman Correlation: 0.2909635675514269 Coefficient of Determination: 0.04323813237505536 RMSE: 0.7292747092714973 NRMSE: 0.11402935021053823 MAPE: 458.8892214771114 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: RandomForests Pearson Correlation: 0.0802570151710381 Spearman Correlation: 0.11695247382987448 Coefficient of Determination: 0.006433519261647924 RMSE: 0.559971260022783 NRMSE: 0.10832003637085712 MAPE: 291.2495113990311 Pearson Correlation: 0.346660309283395 Spearman Correlation: 0.2909635675514269 Coefficient of Determination: 0.044372344924963114 RMSE: 0.7288423144185383 NRMSE: 0.11396174097702108 MAPE: 461.9601899273717 Protein: BRCA2 x_train_column_count: 2 x_train columns: ['BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.023547180686603393 Spearman Correlation: 0.03358887055275644 Coefficient of Determination: 0.0005544697182875424 RMSE: 0.1917440871183986 NRMSE: 0.12352654992327178 MAPE: 108.44803273560206 Pearson Correlation: -0.04528821927041506 Spearman Correlation: -0.05214997182861008 Coefficient of Determination: -0.0030324217873500814 RMSE: 0.20842268216343618 NRMSE: 0.2024877657493235 MAPE: 141.48921034027683 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: RandomForests Pearson Correlation: 0.022136984544663348 Spearman Correlation: 0.027375333303569366 Coefficient of Determination: 0.00042828138088557566 RMSE: 0.19175619138178399 NRMSE: 0.12353434780594878 MAPE: 106.50166095372475 Pearson Correlation: -0.045288219270415035 Spearman Correlation: -0.05214997182861008 Coefficient of Determination: -0.0023996699403898702 RMSE: 0.20835693122681775 NRMSE: 0.20242388709603304 MAPE: 133.64798035245653 Protein: CDKN2A x_train_column_count: 2 x_train columns: ['CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.11748637020751977 Spearman Correlation: 0.07444362464002338 Coefficient of Determination: 0.013803047184538397 RMSE: 0.6692875396019692 NRMSE: 0.15130271043336024 MAPE: 286.38947857389616 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014003976642733562 RMSE: 0.6311168216928167 NRMSE: 0.19015270313130964 MAPE: 201.48847107289973 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: RandomForests Pearson Correlation: 0.11748607688940493 Spearman Correlation: 0.07444362464002338 Coefficient of Determination: 0.013801607454654197 RMSE: 0.6692880281417671 NRMSE: 0.1513028208752723 MAPE: 285.3848795536268 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001487717488891649 RMSE: 0.6311443370647998 NRMSE: 0.19016099339102133 MAPE: 200.97813054284092 Protein: TP53 x_train_column_count: 2 x_train columns: ['TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 0.3619318721690354 Spearman Correlation: 0.3949467797603821 Coefficient of Determination: 0.13099468009178283 RMSE: 0.4196031301269515 NRMSE: 0.10084189620931304 MAPE: 810.7036111040962 Pearson Correlation: 0.3664621098162755 Spearman Correlation: 0.35542745932181025 Coefficient of Determination: 0.13020861328709143 RMSE: 0.40271945707939494 NRMSE: 0.1277987614494145 MAPE: 259.34788516819356 Predictor: ElasticNet Pearson Correlation: 0.3619318721690354 Spearman Correlation: 0.3949467797603821 Coefficient of Determination: 0.11269982630851239 RMSE: 0.4239970011803055 NRMSE: 0.10189786137474298 MAPE: 634.5327742898687 Pearson Correlation: 0.36646210981627575 Spearman Correlation: 0.35542745932181025 Coefficient of Determination: 0.11462298586919584 RMSE: 0.4063115638626941 NRMSE: 0.12893867855505653 MAPE: 182.94782263363578 Predictor: RandomForests Pearson Correlation: 0.36193187216903594 Spearman Correlation: 0.3949467797603821 Coefficient of Determination: 0.13097545594637738 RMSE: 0.4196077713338521 NRMSE: 0.10084301161592216 MAPE: 813.3040369861917 Pearson Correlation: 0.36646210981627547 Spearman Correlation: 0.35542745932181025 Coefficient of Determination: 0.1307669804073508 RMSE: 0.40259017239866035 NRMSE: 0.12775773432300722 MAPE: 258.26006551130655 Protein: CTNNB1 x_train_column_count: 2 x_train columns: ['CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.007687671142576616 Spearman Correlation: 0.009439586432258862 Coefficient of Determination: 5.910028759648078e-05 RMSE: 0.711405808291869 NRMSE: 0.17182055074192565 MAPE: 632.1467050719274 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.15127506890477416 RMSE: 0.861013259572928 NRMSE: 0.18102204599548566 MAPE: 930.9053436038419 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: RandomForests Pearson Correlation: -0.007687671142576612 Spearman Correlation: -0.009439586432258862 Coefficient of Determination: -9.029206101374143e-05 RMSE: 0.7114589487401226 NRMSE: 0.17183338535893214 MAPE: 637.4943294388806 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1560839079158134 RMSE: 0.8628095980904749 NRMSE: 0.18139971366799992 MAPE: 938.757878923958 Protein: CCNE1 x_train_column_count: 2 x_train columns: ['CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.08123735806266234 Spearman Correlation: 0.09770275667467455 Coefficient of Determination: 0.006599508345001337 RMSE: 0.5031358584654905 NRMSE: 0.12142188345331237 MAPE: 102.55057598488078 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017824691987600616 RMSE: 0.4561036073711416 NRMSE: 0.1861191575006699 MAPE: 142.17243416283657 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: RandomForests Pearson Correlation: 0.08120022506527814 Spearman Correlation: 0.09770275667467455 Coefficient of Determination: 0.006593238258982725 RMSE: 0.5031374462944479 NRMSE: 0.1214222666444115 MAPE: 102.54256503203737 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01794359952518043 RMSE: 0.456130248782661 NRMSE: 0.18613002888380847 MAPE: 142.14468216651923 Protein: CCND1 x_train_column_count: 2 x_train columns: ['CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 0.03594431349952054 Spearman Correlation: 0.046263255732839084 Coefficient of Determination: 0.0012919936729518522 RMSE: 0.240151867578827 NRMSE: 0.15343010412518815 MAPE: 627.9447021976318 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011722275390328996 RMSE: 0.22913603298645 NRMSE: 0.14451061616198915 MAPE: 483.22310569753625 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: RandomForests Pearson Correlation: 0.03594431349952054 Spearman Correlation: 0.046263255732839084 Coefficient of Determination: 0.001107179440587025 RMSE: 0.24017408700113996 NRMSE: 0.1534442998435619 MAPE: 630.2725843634295 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001371772661774795 RMSE: 0.22915886657018195 NRMSE: 0.14452501675717833 MAPE: 484.949677365471 Protein: ERBB2 x_train_column_count: 2 x_train columns: ['ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 0.023295176422668335 Spearman Correlation: 0.05381380473881027 Coefficient of Determination: 0.0005426652445632563 RMSE: 0.9805588055602775 NRMSE: 0.16705433081082124 MAPE: 524.3406620393563 Pearson Correlation: -0.09262163827786757 Spearman Correlation: -0.06565658910257163 Coefficient of Determination: -0.08563625817618936 RMSE: 1.0801424697429483 NRMSE: 0.19450111098479278 MAPE: 192.75576805805974 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: RandomForests Pearson Correlation: 0.02329517642266837 Spearman Correlation: 0.05381380473881027 Coefficient of Determination: 0.000540523414418459 RMSE: 0.9805598562250785 NRMSE: 0.16705450980886222 MAPE: 521.7140244202513 Pearson Correlation: -0.09262163827786753 Spearman Correlation: -0.06565658910257163 Coefficient of Determination: -0.08635356937760985 RMSE: 1.0804992514671257 NRMSE: 0.19456535662245214 MAPE: 191.98717303933125 Protein: ERBB3 x_train_column_count: 2 x_train columns: ['ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.02142480092261422 Spearman Correlation: 0.007814858695171355 Coefficient of Determination: 0.0004590220945734913 RMSE: 0.47760618944928274 NRMSE: 0.13059375899236375 MAPE: 236.70687842869484 Pearson Correlation: -0.014753783060940474 Spearman Correlation: -0.016812541184208947 Coefficient of Determination: -0.0012681734095500996 RMSE: 0.3848245985349469 NRMSE: 0.18941294527898078 MAPE: 221.33623703188863 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: RandomForests Pearson Correlation: 0.021424800922614173 Spearman Correlation: 0.007814858695171355 Coefficient of Determination: 0.00045854739811401757 RMSE: 0.477606302860311 NRMSE: 0.13059379000279203 MAPE: 236.75465783396538 Pearson Correlation: -0.014753783060940455 Spearman Correlation: -0.016812541184208947 Coefficient of Determination: -0.0013004453782068381 RMSE: 0.3848308001438883 NRMSE: 0.18941599774761073 MAPE: 221.38891279881895 Fold: 5 Protein: RB1 x_train_column_count: 2 x_train columns: ['RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.0711179976560349 Spearman Correlation: 0.1001714760457071 Coefficient of Determination: 0.005057769590603889 RMSE: 0.2333127949311093 NRMSE: 0.11526002229544531 MAPE: 100.18941901143717 Pearson Correlation: -0.015253771535779833 Spearman Correlation: -0.00847646942326101 Coefficient of Determination: -0.12117279804070336 RMSE: 0.2545163356768559 NRMSE: 0.12832842691893184 MAPE: 105.33988969063172 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: RandomForests Pearson Correlation: 0.07111799765603492 Spearman Correlation: 0.1001714760457071 Coefficient of Determination: 0.005033367009548706 RMSE: 0.23331565610199223 NRMSE: 0.11526143575680244 MAPE: 99.29304491261915 Pearson Correlation: -0.01525377153577983 Spearman Correlation: -0.00847646942326101 Coefficient of Determination: -0.12288181241690399 RMSE: 0.2547102426489134 NRMSE: 0.12842619579740708 MAPE: 100.20290694139734 Protein: CDH1 x_train_column_count: 2 x_train columns: ['CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.5816282576348463 Spearman Correlation: 0.4582736846472864 Coefficient of Determination: 0.3382914300793479 RMSE: 0.9160092191269159 NRMSE: 0.14585669550761374 MAPE: 161.74289628734508 Pearson Correlation: 0.4040532178627406 Spearman Correlation: 0.3914919324769904 Coefficient of Determination: 0.12110491501746656 RMSE: 1.089131627994401 NRMSE: 0.21418096556496452 MAPE: 434.2123017602203 Predictor: ElasticNet Pearson Correlation: 0.5816282576348474 Spearman Correlation: 0.4582736846472864 Coefficient of Determination: 0.26010569386832916 RMSE: 0.9686152616478423 NRMSE: 0.15423318710357029 MAPE: 207.16328692083948 Pearson Correlation: 0.40405321786274073 Spearman Correlation: 0.3914919324769904 Coefficient of Determination: 0.13214222461035552 RMSE: 1.0822712741756153 NRMSE: 0.2128318566351921 MAPE: 732.8326882340175 Predictor: RandomForests Pearson Correlation: 0.5816282576348476 Spearman Correlation: 0.4582736846472864 Coefficient of Determination: 0.3382182867679878 RMSE: 0.9160598442050675 NRMSE: 0.14586475656906903 MAPE: 164.55092898495133 Pearson Correlation: 0.4040532178627407 Spearman Correlation: 0.3914919324769904 Coefficient of Determination: 0.1213952133793107 RMSE: 1.0889517434751397 NRMSE: 0.21414559074062256 MAPE: 449.84162332830107 Protein: CDH2 x_train_column_count: 2 x_train columns: ['CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.010735787613138108 Spearman Correlation: 0.0038718130672675934 Coefficient of Determination: 0.00011525713567439588 RMSE: 0.3591157095637003 NRMSE: 0.17637429869048685 MAPE: 198.0597768408527 Pearson Correlation: 0.011164952153692377 Spearman Correlation: -0.04761525104101502 Coefficient of Determination: -0.015219456025242772 RMSE: 0.4202535419331377 NRMSE: 0.15715406463105572 MAPE: 210.27806194038234 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: RandomForests Pearson Correlation: 0.01072178744521061 Spearman Correlation: 0.0038718130672675934 Coefficient of Determination: 0.00011130642323864404 RMSE: 0.35911641902622005 NRMSE: 0.17637464713237072 MAPE: 193.7852577757733 Pearson Correlation: 0.01116495215369237 Spearman Correlation: -0.04761525104101502 Coefficient of Determination: -0.015623549612273413 RMSE: 0.4203371715684819 NRMSE: 0.1571853379834646 MAPE: 232.94142402457197 Protein: CDH3 x_train_column_count: 2 x_train columns: ['CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.04187821671758305 Spearman Correlation: 0.043446518407187405 Coefficient of Determination: 0.001753785035444544 RMSE: 0.2035890283338524 NRMSE: 0.14283340933788824 MAPE: 141.7709527488807 Pearson Correlation: 0.06628700396052963 Spearman Correlation: 0.07678017698576212 Coefficient of Determination: -0.002282324472242303 RMSE: 0.22364692417131993 NRMSE: 0.20177638211398508 MAPE: 105.78350840419282 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: RandomForests Pearson Correlation: 0.04177136773652152 Spearman Correlation: 0.043446518407187405 Coefficient of Determination: 0.0017370850069072796 RMSE: 0.20359073128464372 NRMSE: 0.14283460408924323 MAPE: 144.35229057940802 Pearson Correlation: 0.06674182119109999 Spearman Correlation: 0.07678017698576212 Coefficient of Determination: -0.0027042807317851913 RMSE: 0.2236939963819714 NRMSE: 0.201818851110143 MAPE: 106.41929115357891 Protein: PTEN x_train_column_count: 2 x_train columns: ['PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 0.18816093898645475 Spearman Correlation: 0.18236589916907733 Coefficient of Determination: 0.0354045389602643 RMSE: 0.5588637237212547 NRMSE: 0.0873838986351739 MAPE: 353.90910399375434 Pearson Correlation: 0.031520428371278525 Spearman Correlation: 0.038545631351581365 Coefficient of Determination: -0.012866989435035947 RMSE: 0.7263327792295774 NRMSE: 0.14050076973645492 MAPE: 456.53977255625955 Predictor: ElasticNet Pearson Correlation: 0.1881609389864549 Spearman Correlation: 0.18236589916907733 Coefficient of Determination: 0.014519398736627442 RMSE: 0.5648815017208492 NRMSE: 0.08832483804563351 MAPE: 313.59546817495936 Pearson Correlation: 0.03152042837127851 Spearman Correlation: 0.038545631351581365 Coefficient of Determination: -0.004872818934343437 RMSE: 0.7234607681203559 NRMSE: 0.1399452120319475 MAPE: 405.80287510833426 Predictor: RandomForests Pearson Correlation: 0.1881609389864551 Spearman Correlation: 0.18236589916907733 Coefficient of Determination: 0.03540023318957386 RMSE: 0.5588649710505516 NRMSE: 0.08738409366750864 MAPE: 354.93281811227047 Pearson Correlation: 0.03152042837127851 Spearman Correlation: 0.038545631351581365 Coefficient of Determination: -0.012934777677075404 RMSE: 0.7263570844932307 NRMSE: 0.14050547131175153 MAPE: 458.05572247234744 Protein: BRCA2 x_train_column_count: 2 x_train columns: ['BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.0018526246361028572 Spearman Correlation: -0.00844914285539878 Coefficient of Determination: 3.432218042220825e-06 RMSE: 0.2004678568162028 NRMSE: 0.12914663025685477 MAPE: 103.37987265211024 Pearson Correlation: -0.011599960217247626 Spearman Correlation: -0.0406964132008184 Coefficient of Determination: -0.0938115501816641 RMSE: 0.1737034097505018 NRMSE: 0.22716721343163773 MAPE: 102.36293104032073 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: RandomForests Pearson Correlation: 0.0018516775982404463 Spearman Correlation: -0.00844914285539878 Coefficient of Determination: -3.8417427794756875e-05 RMSE: 0.20047205154111825 NRMSE: 0.12914933260822564 MAPE: 105.39095596231343 Pearson Correlation: -0.010996029673101954 Spearman Correlation: -0.0406964132008184 Coefficient of Determination: -0.09815844687537245 RMSE: 0.17404822329999695 NRMSE: 0.22761815641142605 MAPE: 104.10394706388342 Protein: CDKN2A x_train_column_count: 2 x_train columns: ['CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 0.12978199413361982 Spearman Correlation: 0.09070675404263925 Coefficient of Determination: 0.016843366001298987 RMSE: 0.6739390446495939 NRMSE: 0.17161239709953754 MAPE: 279.770568542601 Pearson Correlation: 0.04137719342734658 Spearman Correlation: 0.033162694947993426 Coefficient of Determination: -0.025520611448484276 RMSE: 0.6136328672329808 NRMSE: 0.15440800866434684 MAPE: 291.6978581480934 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: RandomForests Pearson Correlation: 0.12977741478112534 Spearman Correlation: 0.09070675404263925 Coefficient of Determination: 0.01671530403796395 RMSE: 0.6739829354925985 NRMSE: 0.17162357350019058 MAPE: 281.8646938966703 Pearson Correlation: 0.04166401480977075 Spearman Correlation: 0.033162694947993426 Coefficient of Determination: -0.02020224696671069 RMSE: 0.612039644539014 NRMSE: 0.1540071071535729 MAPE: 289.39317825345057 Protein: TP53 x_train_column_count: 2 x_train columns: ['TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.3574585550891103 Spearman Correlation: 0.3936113463685194 Coefficient of Determination: 0.12777661860639455 RMSE: 0.39579251239794433 NRMSE: 0.10066189689410829 MAPE: 817.2968252630944 Pearson Correlation: 0.3905207854305501 Spearman Correlation: 0.3722018462120896 Coefficient of Determination: 0.13680678944668334 RMSE: 0.4906907041438961 NRMSE: 0.13142914266610314 MAPE: 200.44205743993425 Predictor: ElasticNet Pearson Correlation: 0.3574585550891103 Spearman Correlation: 0.3936113463685194 Coefficient of Determination: 0.10954970368504546 RMSE: 0.39990658285986413 NRMSE: 0.10170822830180426 MAPE: 642.7097509738543 Pearson Correlation: 0.39052078543055013 Spearman Correlation: 0.3722018462120896 Coefficient of Determination: 0.10316370197252211 RMSE: 0.5001616757239217 NRMSE: 0.13396589680565735 MAPE: 165.60123262688344 Predictor: RandomForests Pearson Correlation: 0.3574585550891107 Spearman Correlation: 0.3936113463685194 Coefficient of Determination: 0.12773707440476278 RMSE: 0.39580148436651097 NRMSE: 0.10066417873458404 MAPE: 817.906126124106 Pearson Correlation: 0.3905207854305501 Spearman Correlation: 0.3722018462120896 Coefficient of Determination: 0.13567908516029503 RMSE: 0.4910111268438982 NRMSE: 0.13151496634361812 MAPE: 200.11605419718208 Protein: CTNNB1 x_train_column_count: 2 x_train columns: ['CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.0020950040095229897 Spearman Correlation: 0.003736502962769133 Coefficient of Determination: 4.3890417996683695e-06 RMSE: 0.7559791352601098 NRMSE: 0.148697705597976 MAPE: 703.9726416613712 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011026058090757296 RMSE: 0.6776950899066491 NRMSE: 0.21704370367143408 MAPE: 269.9221867701233 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: RandomForests Pearson Correlation: -0.0020950040095230084 Spearman Correlation: -0.003736502962769133 Coefficient of Determination: -0.00011875177844133944 RMSE: 0.7560256799769525 NRMSE: 0.1487068607350418 MAPE: 710.8335756424347 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.010459654401615e-06 RMSE: 0.6776607844657946 NRMSE: 0.21703271675408728 MAPE: 272.33919704720387 Protein: CCNE1 x_train_column_count: 2 x_train columns: ['CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.08127982123126397 Spearman Correlation: 0.08051512931366309 Coefficient of Determination: 0.006606409339386166 RMSE: 0.44730817867367717 NRMSE: 0.159326154469698 MAPE: 111.71875270878657 Pearson Correlation: 0.05263185104833811 Spearman Correlation: 0.08854605023683378 Coefficient of Determination: -0.0016208647012083688 RMSE: 0.6486211276221046 NRMSE: 0.15653187432056 MAPE: 115.03638913841165 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: RandomForests Pearson Correlation: 0.08125363405539834 Spearman Correlation: 0.08051512931366309 Coefficient of Determination: 0.006597604308134608 RMSE: 0.4473101610469288 NRMSE: 0.1593268605688081 MAPE: 111.70175139444827 Pearson Correlation: 0.05263185104833813 Spearman Correlation: 0.08854605023683378 Coefficient of Determination: -0.001527301326872177 RMSE: 0.6485908324271868 NRMSE: 0.15652456317474403 MAPE: 115.00644692898088 Protein: CCND1 x_train_column_count: 2 x_train columns: ['CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.03769158935499709 Spearman Correlation: 0.04737468529999438 Coefficient of Determination: 0.0014206559081055836 RMSE: 0.22745702728285788 NRMSE: 0.14326377310469232 MAPE: 687.3385945234648 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002808868279990051 RMSE: 0.2763462386751039 NRMSE: 0.17655424711868228 MAPE: 267.8460291407984 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: RandomForests Pearson Correlation: 0.037691589354997106 Spearman Correlation: 0.04737468529999438 Coefficient of Determination: 0.001220336764281793 RMSE: 0.22747984054871362 NRMSE: 0.14327814203662806 MAPE: 685.5381470259015 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026314247648289157 RMSE: 0.27632178834418064 NRMSE: 0.1765386260999608 MAPE: 267.22409057809426 Protein: ERBB2 x_train_column_count: 2 x_train columns: ['ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.015501486235900202 Spearman Correlation: -0.010524645795195109 Coefficient of Determination: 0.00024029607552189525 RMSE: 1.0277968238368542 NRMSE: 0.1751021046794307 MAPE: 611.0573280920913 Pearson Correlation: -0.06798366079555399 Spearman Correlation: -0.10497781362654021 Coefficient of Determination: -0.02178907712847833 RMSE: 0.8771227499980504 NRMSE: 0.19407517424450724 MAPE: 569.345214656059 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: RandomForests Pearson Correlation: 0.01550148623590022 Spearman Correlation: -0.010524645795195109 Coefficient of Determination: 0.00018873902134175502 RMSE: 1.027823324951659 NRMSE: 0.1751066195804997 MAPE: 598.6634011725718 Pearson Correlation: -0.06798366079555397 Spearman Correlation: -0.10497781362654021 Coefficient of Determination: -0.019546474866501073 RMSE: 0.8761596755255827 NRMSE: 0.1938620810987018 MAPE: 557.935886108782 Protein: ERBB3 x_train_column_count: 2 x_train columns: ['ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.02540522615392871 Spearman Correlation: 0.012704753198477449 Coefficient of Determination: 0.0006454255159322742 RMSE: 0.4687588627911158 NRMSE: 0.12650456292754111 MAPE: 250.17653677182054 Pearson Correlation: -0.0121682674842103 Spearman Correlation: -0.011137660996301922 Coefficient of Determination: -0.05628867742858956 RMSE: 0.42854412837186895 NRMSE: 0.20734267208485851 MAPE: 241.2913491711111 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: RandomForests Pearson Correlation: 0.025405226153928734 Spearman Correlation: 0.012704753198477449 Coefficient of Determination: 0.0006263825965189262 RMSE: 0.4687633289210323 NRMSE: 0.12650576820782042 MAPE: 248.53601174146308 Pearson Correlation: -0.012168267484210321 Spearman Correlation: -0.011137660996301922 Coefficient of Determination: -0.05408236149468304 RMSE: 0.4280963350725598 NRMSE: 0.2071260160789223 MAPE: 239.57566420689625
Unnormalized
scenario = Scenario.selfmRNA_Mutations
normalizeTechnique = NormalizeTechnique.UN
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 10.7401 | 141.1933 | 314.4482 | 0.0000 | 0.0 | 0.000 | 2.9988 | 9.4249 | 0.0 | 0.0000 | ... | 74.1138 | 533.3625 | 1053.4444 | 94.6772 | 881.2262 | 5343.4779 | 934.3482 | 508.0867 | 52.2652 | 0.8568 |
| TCGA-A1-A0SH-01 | 3.0048 | 79.8003 | 95.7054 | 0.0000 | 0.0 | 0.000 | 0.3612 | 3.9727 | 0.0 | 0.0000 | ... | 87.7601 | 581.0946 | 801.3977 | 19.8634 | 1353.2389 | 5464.9614 | 1312.7898 | 1001.1151 | 455.7746 | 0.0000 |
| TCGA-A1-A0SJ-01 | 4.9419 | 134.8733 | 63.6488 | 0.3658 | 0.0 | 0.000 | 0.3658 | 4.7554 | 0.0 | 0.7316 | ... | 83.7677 | 2731.4129 | 834.3850 | 51.2117 | 1092.6383 | 3032.0988 | 958.3905 | 718.7929 | 43.5299 | 0.0000 |
| TCGA-A1-A0SK-01 | 28.8560 | 1119.1932 | 166.7192 | 0.3152 | 0.0 | 1.891 | 0.0000 | 3.4668 | 0.0 | 0.0000 | ... | 69.0199 | 610.1481 | 1775.6067 | 158.5251 | 1380.7123 | 591.2386 | 1798.9285 | 1335.6445 | 49.4800 | 0.0000 |
| TCGA-A1-A0SQ-01 | 1.0368 | 41.5532 | 75.8447 | 0.0000 | 0.0 | 0.000 | 0.4034 | 5.6480 | 0.0 | 0.0000 | ... | 106.1019 | 617.2466 | 875.0378 | 25.4160 | 969.4402 | 2903.0761 | 715.6833 | 691.4776 | 17.7509 | 0.0000 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 2 x_train columns: ['RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.19527152842778892 Spearman Correlation: 0.2596678142795193 Coefficient of Determination: 0.038130969814524684 RMSE: 0.2197877955294061 NRMSE: 0.08323718823306422 MAPE: 187.67141163742264 Pearson Correlation: 0.27962798152870116 Spearman Correlation: 0.34967808018729885 Coefficient of Determination: 0.021823743704235454 RMSE: 0.27738895709917644 NRMSE: 0.13703430790926743 MAPE: 130.43726751279024 Predictor: ElasticNet Pearson Correlation: 0.19391279737668243 Spearman Correlation: 0.25847504910702246 Coefficient of Determination: 0.037602166880939536 RMSE: 0.21984820316169457 NRMSE: 0.08326006557913067 MAPE: 189.5233272234876 Pearson Correlation: 0.2796279815287011 Spearman Correlation: 0.34967808018729885 Coefficient of Determination: 0.021248651856464407 RMSE: 0.2774704867247404 NRMSE: 0.137074584767907 MAPE: 131.60775066232006 Predictor: RandomForests Pearson Correlation: 0.3383152856508986 Spearman Correlation: 0.3393842592916632 Coefficient of Determination: 0.09803238411505888 RMSE: 0.21283403305296428 NRMSE: 0.08060368606436821 MAPE: 145.4194861494385 Pearson Correlation: 0.27052230404535893 Spearman Correlation: 0.3280678885109722 Coefficient of Determination: 0.025909129675039777 RMSE: 0.27680908886038547 NRMSE: 0.13674784429654013 MAPE: 107.55264771623115 Protein: CDH1 x_train_column_count: 2 x_train columns: ['CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 0.6279558973899954 Spearman Correlation: 0.5626465965121538 Coefficient of Determination: 0.39432860906687417 RMSE: 0.8782006040980864 NRMSE: 0.14761410655002882 MAPE: 484.0992717600402 Pearson Correlation: 0.6734443624132092 Spearman Correlation: 0.6512632913862063 Coefficient of Determination: 0.45274753665740086 RMSE: 0.8583534228745239 NRMSE: 0.13902261392156456 MAPE: 259.40861656444457 Predictor: ElasticNet Pearson Correlation: 0.5982430844937681 Spearman Correlation: 0.566250464567776 Coefficient of Determination: 0.35340459164399074 RMSE: 0.907384820144156 NRMSE: 0.1525195939260343 MAPE: 593.6205564762978 Pearson Correlation: 0.6256282777926636 Spearman Correlation: 0.6512632913862063 Coefficient of Determination: 0.39004223915145975 RMSE: 0.9061960430782401 NRMSE: 0.1467714105597875 MAPE: 321.4646959518847 Predictor: RandomForests Pearson Correlation: 0.7167132530882677 Spearman Correlation: 0.5788660777443754 Coefficient of Determination: 0.5131766821713584 RMSE: 0.787337410243528 NRMSE: 0.1323411847181228 MAPE: 307.9025522067983 Pearson Correlation: 0.7415010523499842 Spearman Correlation: 0.6553520846612731 Coefficient of Determination: 0.5467665669927284 RMSE: 0.781147864684134 NRMSE: 0.12651806949631272 MAPE: 152.89909095904093 Protein: CDH2 x_train_column_count: 2 x_train columns: ['CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.15002477351668805 Spearman Correlation: 0.021027718948557195 Coefficient of Determination: 0.02250743266873345 RMSE: 0.366993371962299 NRMSE: 0.1355784991382294 MAPE: 373.6787655351268 Pearson Correlation: 0.10564670001853972 Spearman Correlation: 0.11871524729294705 Coefficient of Determination: 0.008640461878668515 RMSE: 0.3734908911193236 NRMSE: 0.19274959545818424 MAPE: 104.18723456874639 Predictor: ElasticNet Pearson Correlation: 0.15002477351668805 Spearman Correlation: 0.021027718948557195 Coefficient of Determination: 0.022507432249068038 RMSE: 0.36699337204107935 NRMSE: 0.13557849916733325 MAPE: 373.6898428330703 Pearson Correlation: 0.10564670001853971 Spearman Correlation: 0.11871524729294705 Coefficient of Determination: 0.008639812591772711 RMSE: 0.3734910134274733 NRMSE: 0.19274965857845555 MAPE: 104.1873778445509 Predictor: RandomForests Pearson Correlation: 0.19331701961991646 Spearman Correlation: 0.1288920303560814 Coefficient of Determination: 0.03662847645748135 RMSE: 0.36433290051662137 NRMSE: 0.1345956401735663 MAPE: 517.4362375376886 Pearson Correlation: 0.044230558158288136 Spearman Correlation: -0.05978684567685635 Coefficient of Determination: -0.006409334490806495 RMSE: 0.3763151890353155 NRMSE: 0.19420714715142465 MAPE: 98.36754929438122 Protein: CDH3 x_train_column_count: 2 x_train columns: ['CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.2485227279173733 Spearman Correlation: 0.30478529422494005 Coefficient of Determination: 0.06176354629149272 RMSE: 0.20224890215241426 NRMSE: 0.14189320743700837 MAPE: 292.39454632267484 Pearson Correlation: 0.42292751331407674 Spearman Correlation: 0.4640717978733782 Coefficient of Determination: 0.16215276852659732 RMSE: 0.18725963044582647 NRMSE: 0.14332812641757542 MAPE: 197.9811113353206 Predictor: ElasticNet Pearson Correlation: 0.24821600086503437 Spearman Correlation: 0.3061115403229242 Coefficient of Determination: 0.06161118266330978 RMSE: 0.20226532345295767 NRMSE: 0.14190472824616776 MAPE: 292.6085090187212 Pearson Correlation: 0.42292751331407674 Spearman Correlation: 0.4640717978733782 Coefficient of Determination: 0.16216875583511714 RMSE: 0.1872578438481901 NRMSE: 0.14332675895951053 MAPE: 198.4467027602953 Predictor: RandomForests Pearson Correlation: 0.3496682668189332 Spearman Correlation: 0.3307097672586625 Coefficient of Determination: 0.12015906260707776 RMSE: 0.19585384588255172 NRMSE: 0.13740658211437934 MAPE: 381.1612404025097 Pearson Correlation: 0.4456557812474688 Spearman Correlation: 0.4605862331967038 Coefficient of Determination: 0.17847992914693533 RMSE: 0.1854260861696705 NRMSE: 0.14192473549354423 MAPE: 326.56281030401266 Protein: PTEN x_train_column_count: 2 x_train columns: ['PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 0.41887910343528845 Spearman Correlation: 0.44078066604527977 Coefficient of Determination: 0.17545970329475102 RMSE: 0.5688648238965365 NRMSE: 0.08894767006434781 MAPE: 396.80264759862155 Pearson Correlation: 0.3573110229996069 Spearman Correlation: 0.4041020388254805 Coefficient of Determination: 0.11499556078292572 RMSE: 0.4672372428875628 NRMSE: 0.15399025868023294 MAPE: 165.92352360717715 Predictor: ElasticNet Pearson Correlation: 0.40684103921921416 Spearman Correlation: 0.4335278292758756 Coefficient of Determination: 0.16550245574160816 RMSE: 0.5722893560906132 NRMSE: 0.08948312971473898 MAPE: 428.78546533089406 Pearson Correlation: 0.379990597125128 Spearman Correlation: 0.4058628426494976 Coefficient of Determination: 0.1373064840057533 RMSE: 0.46131013366488316 NRMSE: 0.15203682475277935 MAPE: 166.7292755827795 Predictor: RandomForests Pearson Correlation: 0.45236902822468755 Spearman Correlation: 0.4487524954963713 Coefficient of Determination: 0.20039971076781782 RMSE: 0.5601954903785883 NRMSE: 0.08759213359058529 MAPE: 516.2173301723134 Pearson Correlation: 0.38441368455050445 Spearman Correlation: 0.39593710625776624 Coefficient of Determination: 0.13716782199510313 RMSE: 0.46134720570689036 NRMSE: 0.15204904281421472 MAPE: 200.88083641732086 Protein: BRCA2 x_train_column_count: 2 x_train columns: ['BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.00842802231569147 Spearman Correlation: -0.005159182575289313 Coefficient of Determination: 7.103156015364487e-05 RMSE: 0.19760420841075446 NRMSE: 0.12782801056418722 MAPE: 122.20696074669006 Pearson Correlation: -0.07297127632150095 Spearman Correlation: -0.08797201245252427 Coefficient of Determination: -0.0064731867761484985 RMSE: 0.1853316133792551 NRMSE: 0.18547999737715687 MAPE: 103.9139384990902 Predictor: ElasticNet Pearson Correlation: 0.001680113662234027 Spearman Correlation: -0.003365850045682841 Coefficient of Determination: 2.7358727012760653e-06 RMSE: 0.19761095653249758 NRMSE: 0.12783237585065763 MAPE: 122.61315173587421 Pearson Correlation: -0.08404684070019271 Spearman Correlation: -0.06737887447433855 Coefficient of Determination: -0.004996483180788047 RMSE: 0.18519560363587143 NRMSE: 0.18534387873886254 MAPE: 104.29990341904134 Predictor: RandomForests Pearson Correlation: 0.3264054509821304 Spearman Correlation: 0.25514821736101123 Coefficient of Determination: 0.04915822129348457 RMSE: 0.19269291308570505 NRMSE: 0.1246509471010991 MAPE: 134.13410266570628 Pearson Correlation: -0.04146970603920158 Spearman Correlation: -0.016131654893247544 Coefficient of Determination: -0.022246853818178813 RMSE: 0.18677824613802824 NRMSE: 0.18692778836872323 MAPE: 115.02861537614206 Protein: CDKN2A x_train_column_count: 2 x_train columns: ['CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 0.48029990684232304 Spearman Correlation: 0.48708475403799584 Coefficient of Determination: 0.23068800051274418 RMSE: 0.5637278766322544 NRMSE: 0.12743933008528413 MAPE: 152.2218946618392 Pearson Correlation: 0.5965712816312629 Spearman Correlation: 0.5412203687445128 Coefficient of Determination: 0.35132796117392295 RMSE: 0.6015263279382246 NRMSE: 0.16244297270813518 MAPE: 148.06735276797707 Predictor: ElasticNet Pearson Correlation: 0.48027814349293335 Spearman Correlation: 0.4872043250292133 Coefficient of Determination: 0.23066709449592215 RMSE: 0.5637355362192715 NRMSE: 0.12744106165237287 MAPE: 154.4081579768272 Pearson Correlation: 0.596571281631263 Spearman Correlation: 0.5412203687445128 Coefficient of Determination: 0.35130488166567975 RMSE: 0.6015370288837933 NRMSE: 0.1624458625125016 MAPE: 147.7069685838304 Predictor: RandomForests Pearson Correlation: 0.6031166548470466 Spearman Correlation: 0.5142043852276713 Coefficient of Determination: 0.36338257195258583 RMSE: 0.5128112215701984 NRMSE: 0.11592883950948307 MAPE: 222.42155552398435 Pearson Correlation: 0.6736173012257093 Spearman Correlation: 0.5183481629817652 Coefficient of Determination: 0.4416816519711879 RMSE: 0.5580627074004604 NRMSE: 0.15070556505548485 MAPE: 518.4052407636528 Protein: TP53 x_train_column_count: 2 x_train columns: ['TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.48936689486328205 Spearman Correlation: 0.38957054234181804 Coefficient of Determination: 0.23947995778813058 RMSE: 0.39489398622837557 NRMSE: 0.09490362562566104 MAPE: 795.0838550971351 Pearson Correlation: 0.5034551498329739 Spearman Correlation: 0.4709930738464541 Coefficient of Determination: 0.24730289040861464 RMSE: 0.3649372558854645 NRMSE: 0.13122990970026413 MAPE: 596.0863107159812 Predictor: ElasticNet Pearson Correlation: 0.4767960165661574 Spearman Correlation: 0.37967156762432147 Coefficient of Determination: 0.22315435987641863 RMSE: 0.399109949484189 NRMSE: 0.0959168347714946 MAPE: 689.7061639401562 Pearson Correlation: 0.4596055316008117 Spearman Correlation: 0.4135498975709687 Coefficient of Determination: 0.20952397512573018 RMSE: 0.37398348911730406 NRMSE: 0.1344828973056579 MAPE: 649.7760577868451 Predictor: RandomForests Pearson Correlation: 0.5510002233027409 Spearman Correlation: 0.4233688188011204 Coefficient of Determination: 0.2954069900795824 RMSE: 0.3800969225428784 NRMSE: 0.09134749400213373 MAPE: 699.0310629901686 Pearson Correlation: 0.5124254978006286 Spearman Correlation: 0.5046523359322292 Coefficient of Determination: 0.2612377223025778 RMSE: 0.36154339655957785 NRMSE: 0.13000949209233625 MAPE: 378.7330812455238 Protein: CTNNB1 x_train_column_count: 2 x_train columns: ['CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 0.08898105342822928 Spearman Correlation: 0.14590811000321963 Coefficient of Determination: 0.007917627869197141 RMSE: 0.7343107892164393 NRMSE: 0.1479958057150653 MAPE: 635.7829662685036 Pearson Correlation: -0.0024019468238156453 Spearman Correlation: -0.034040581406692035 Coefficient of Determination: -0.022319441458223288 RMSE: 0.7592919987705886 NRMSE: 0.1883818783234726 MAPE: 284.0557468282036 Predictor: ElasticNet Pearson Correlation: 0.08898105342822928 Spearman Correlation: 0.14590811000321963 Coefficient of Determination: 0.007917627859243881 RMSE: 0.7343107892201228 NRMSE: 0.14799580571580767 MAPE: 635.7839649126599 Pearson Correlation: -0.0024019468238157377 Spearman Correlation: -0.034040581406692035 Coefficient of Determination: -0.022319025688373184 RMSE: 0.7592918443713178 NRMSE: 0.1883818400167017 MAPE: 284.0572113694304 Predictor: RandomForests Pearson Correlation: 0.3101921197195444 Spearman Correlation: 0.30218639412689285 Coefficient of Determination: 0.08112196149899753 RMSE: 0.7066998169279368 NRMSE: 0.14243098472860852 MAPE: 629.3479296651823 Pearson Correlation: -0.06030718098076416 Spearman Correlation: -0.04014575748895606 Coefficient of Determination: -0.07580801753149946 RMSE: 0.7789021484733238 NRMSE: 0.19324719606840765 MAPE: 401.6201927378137 Protein: CCNE1 x_train_column_count: 2 x_train columns: ['CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.7219448352970321 Spearman Correlation: 0.7137588590927915 Coefficient of Determination: 0.5212043452120587 RMSE: 0.3346765572640926 NRMSE: 0.08076756455923272 MAPE: 91.9557432422028 Pearson Correlation: 0.7713064884061224 Spearman Correlation: 0.7106623744024974 Coefficient of Determination: 0.5218328477320503 RMSE: 0.3713611938248207 NRMSE: 0.13227469058764763 MAPE: 54.384538943198976 Predictor: ElasticNet Pearson Correlation: 0.7219395993512734 Spearman Correlation: 0.7131090453751777 Coefficient of Determination: 0.5211967831854369 RMSE: 0.33467920016928354 NRMSE: 0.08076820237210308 MAPE: 91.95910751284202 Pearson Correlation: 0.7713064884061223 Spearman Correlation: 0.7106623744024974 Coefficient of Determination: 0.5218168547808681 RMSE: 0.371367404113164 NRMSE: 0.13227690262267638 MAPE: 54.38379352439229 Predictor: RandomForests Pearson Correlation: 0.8562861508639215 Spearman Correlation: 0.7204360697849619 Coefficient of Determination: 0.7279163800285591 RMSE: 0.25229078682087813 NRMSE: 0.06088538910173954 MAPE: 54.30365639848357 Pearson Correlation: 0.8350602153703399 Spearman Correlation: 0.7068832036023305 Coefficient of Determination: 0.6949121277125943 RMSE: 0.29663276628948443 NRMSE: 0.10565726314852517 MAPE: 44.991407020009255 Protein: CCND1 x_train_column_count: 2 x_train columns: ['CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 0.4040680875024818 Spearman Correlation: 0.37768748734328855 Coefficient of Determination: 0.1632710193379131 RMSE: 0.21852325442478654 NRMSE: 0.13136986114438118 MAPE: 345.99314721459893 Pearson Correlation: 0.4722252539569458 Spearman Correlation: 0.4734221051604722 Coefficient of Determination: 0.0839977628278058 RMSE: 0.22486339456981952 NRMSE: 0.1601499875860489 MAPE: 1093.634695043635 Predictor: ElasticNet Pearson Correlation: 0.4014769912379663 Spearman Correlation: 0.3731637827526827 Coefficient of Determination: 0.16118377448506616 RMSE: 0.2187956409782004 NRMSE: 0.1315336120632194 MAPE: 347.3103752911429 Pearson Correlation: 0.4722252539569458 Spearman Correlation: 0.4734221051604722 Coefficient of Determination: 0.0852166238226677 RMSE: 0.22471373966489103 NRMSE: 0.16004340184668325 MAPE: 1097.9036461892458 Predictor: RandomForests Pearson Correlation: 0.4678371375434505 Spearman Correlation: 0.4000144577763212 Coefficient of Determination: 0.21263881710072907 RMSE: 0.21197871451568037 NRMSE: 0.12743547301083333 MAPE: 313.8994682707794 Pearson Correlation: 0.5051577497307473 Spearman Correlation: 0.4767786498993165 Coefficient of Determination: 0.2533320194705554 RMSE: 0.20301786639906733 NRMSE: 0.14459138111722075 MAPE: 1138.045040698996 Protein: ERBB2 x_train_column_count: 2 x_train columns: ['ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 0.7659173929830421 Spearman Correlation: 0.6116397286443633 Coefficient of Determination: 0.5866294528739393 RMSE: 0.6552429682383681 NRMSE: 0.11163142379310155 MAPE: 324.58040198328666 Pearson Correlation: 0.7602365413428477 Spearman Correlation: 0.7022827041264268 Coefficient of Determination: 0.5613254676670082 RMSE: 0.6007556763198301 NRMSE: 0.11139545268307623 MAPE: 284.3036808748743 Predictor: ElasticNet Pearson Correlation: 0.7657610435301817 Spearman Correlation: 0.6137508967340191 Coefficient of Determination: 0.5863899757883764 RMSE: 0.6554327410192713 NRMSE: 0.11166375470965659 MAPE: 320.57315839682013 Pearson Correlation: 0.7627625013199513 Spearman Correlation: 0.7166081357916302 Coefficient of Determination: 0.5648365532286272 RMSE: 0.5983466668596052 NRMSE: 0.11094876077500561 MAPE: 281.069266393709 Predictor: RandomForests Pearson Correlation: 0.8350447059162798 Spearman Correlation: 0.6216515632506531 Coefficient of Determination: 0.6965509892505153 RMSE: 0.5614039541274837 NRMSE: 0.09564440331319891 MAPE: 467.4276979149923 Pearson Correlation: 0.8040149199599619 Spearman Correlation: 0.712575091635544 Coefficient of Determination: 0.6363330370305993 RMSE: 0.5469890053467115 NRMSE: 0.1014257380579847 MAPE: 341.9689748270015 Protein: ERBB3 x_train_column_count: 2 x_train columns: ['ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.40624826413738435 Spearman Correlation: 0.4427133471412132 Coefficient of Determination: 0.16503765211463794 RMSE: 0.41954331383050747 NRMSE: 0.11322269882916539 MAPE: 202.28699368456597 Pearson Correlation: 0.4086291987816517 Spearman Correlation: 0.45536588548210316 Coefficient of Determination: 0.1635740509453627 RMSE: 0.42574664485715835 NRMSE: 0.17083439460434255 MAPE: 197.9044682075449 Predictor: ElasticNet Pearson Correlation: 0.40021079138717147 Spearman Correlation: 0.4461608353851102 Coefficient of Determination: 0.16016867751350838 RMSE: 0.42076479189714844 NRMSE: 0.1135523407009498 MAPE: 200.2441254891731 Pearson Correlation: 0.4241326159508129 Spearman Correlation: 0.47324952839944506 Coefficient of Determination: 0.1757020601130055 RMSE: 0.42264875350148234 NRMSE: 0.1695913398423385 MAPE: 193.8899861081272 Predictor: RandomForests Pearson Correlation: 0.488999182581015 Spearman Correlation: 0.4625532488300241 Coefficient of Determination: 0.23752045294377655 RMSE: 0.40091975626486726 NRMSE: 0.10819673516851229 MAPE: 242.43941073526028 Pearson Correlation: 0.43051383879067884 Spearman Correlation: 0.4715525332197415 Coefficient of Determination: 0.17662898932460092 RMSE: 0.42241105081251895 NRMSE: 0.16949595965448402 MAPE: 271.39177387721145 Fold: 2 Protein: RB1 x_train_column_count: 2 x_train columns: ['RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.25115726940753613 Spearman Correlation: 0.31907158047894724 Coefficient of Determination: 0.06307997397624976 RMSE: 0.22750719811233844 NRMSE: 0.08320187174968492 MAPE: 201.25627265479454 Pearson Correlation: 0.0483934781091427 Spearman Correlation: 0.10395083406496927 Coefficient of Determination: -0.051405406886394944 RMSE: 0.25111985237096757 NRMSE: 0.14387359625245932 MAPE: 325.89365584090115 Predictor: ElasticNet Pearson Correlation: 0.24789230471088966 Spearman Correlation: 0.3159366197816136 Coefficient of Determination: 0.0614505891752305 RMSE: 0.22770493950541615 NRMSE: 0.08327418794083388 MAPE: 202.68623360781214 Pearson Correlation: 0.05322314385144897 Spearman Correlation: 0.10746268656716418 Coefficient of Determination: -0.04575272809607256 RMSE: 0.25044389383155213 NRMSE: 0.14348632067442343 MAPE: 328.60979867665503 Predictor: RandomForests Pearson Correlation: 0.3561481274847229 Spearman Correlation: 0.4067656823580468 Coefficient of Determination: 0.11704931686327302 RMSE: 0.22085747588364613 NRMSE: 0.08076999556891681 MAPE: 212.91843709848627 Pearson Correlation: 0.11218713523215126 Spearman Correlation: 0.13196685330144695 Coefficient of Determination: -0.018378086466819266 RMSE: 0.24714422519366094 NRMSE: 0.14159584810169526 MAPE: 371.2808731876731 Protein: CDH1 x_train_column_count: 2 x_train columns: ['CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.6315052198313875 Spearman Correlation: 0.5446486441750252 Coefficient of Determination: 0.3987988426742891 RMSE: 0.8688793749984193 NRMSE: 0.13938868613113328 MAPE: 415.3191601391166 Pearson Correlation: 0.6431590335933615 Spearman Correlation: 0.6870841869085944 Coefficient of Determination: 0.38536419609566064 RMSE: 0.9020711996260493 NRMSE: 0.16019733610833764 MAPE: 254.1830859124406 Predictor: ElasticNet Pearson Correlation: 0.5951304320908117 Spearman Correlation: 0.5470018601309251 Coefficient of Determination: 0.34798260794213587 RMSE: 0.9048553832837777 NRMSE: 0.14516008394702457 MAPE: 545.2918347012886 Pearson Correlation: 0.6571353643350671 Spearman Correlation: 0.6870841869085944 Coefficient of Determination: 0.3814703045530802 RMSE: 0.9049241262444636 NRMSE: 0.16070398263975555 MAPE: 249.3514005765416 Predictor: RandomForests Pearson Correlation: 0.7366071809739936 Spearman Correlation: 0.5636673055499254 Coefficient of Determination: 0.5422574030959135 RMSE: 0.7581589198918414 NRMSE: 0.12162652119865908 MAPE: 214.97063545629814 Pearson Correlation: 0.6551607825586359 Spearman Correlation: 0.7008146074293089 Coefficient of Determination: 0.39105486201687945 RMSE: 0.8978855313682372 NRMSE: 0.1594540101879306 MAPE: 214.84821008509215 Protein: CDH2 x_train_column_count: 2 x_train columns: ['CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.14703976168201788 Spearman Correlation: 0.035212766431470366 Coefficient of Determination: 0.02162069151550461 RMSE: 0.3640972720820029 NRMSE: 0.1319288615414171 MAPE: 381.47691248370876 Pearson Correlation: 0.11717867760285976 Spearman Correlation: 0.063681592039801 Coefficient of Determination: 0.012875471236388325 RMSE: 0.3845803830082546 NRMSE: 0.2026058693416578 MAPE: 121.62788852850377 Predictor: ElasticNet Pearson Correlation: 0.1470313787581837 Spearman Correlation: 0.03346468965108404 Coefficient of Determination: 0.021618225886850806 RMSE: 0.36409773086526487 NRMSE: 0.1319290277792829 MAPE: 381.9573351533159 Pearson Correlation: 0.11717867760285976 Spearman Correlation: 0.063681592039801 Coefficient of Determination: 0.012876554839764243 RMSE: 0.3845801719240886 NRMSE: 0.2026057581376213 MAPE: 121.674712278187 Predictor: RandomForests Pearson Correlation: 0.19455280933418412 Spearman Correlation: 0.14521011138581139 Coefficient of Determination: 0.03651059964118086 RMSE: 0.3613160602024537 NRMSE: 0.13092110305183483 MAPE: 424.3360219113005 Pearson Correlation: 0.11830349762100852 Spearman Correlation: 0.0855059428777579 Coefficient of Determination: 0.010769358098726367 RMSE: 0.3849904316896376 NRMSE: 0.20282189250153443 MAPE: 124.97634642871276 Protein: CDH3 x_train_column_count: 2 x_train columns: ['CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.33039940395723194 Spearman Correlation: 0.3546567496876568 Coefficient of Determination: 0.10916376613529422 RMSE: 0.1960421497425445 NRMSE: 0.14754099760112624 MAPE: 270.98615080270275 Pearson Correlation: 0.10870762980468018 Spearman Correlation: 0.25441908106526195 Coefficient of Determination: -0.18081292145862649 RMSE: 0.21507834130770145 NRMSE: 0.17697551329523697 MAPE: 625.0033719921508 Predictor: ElasticNet Pearson Correlation: 0.33037645723903114 Spearman Correlation: 0.3550272027884919 Coefficient of Determination: 0.1091486031387211 RMSE: 0.19604381816019675 NRMSE: 0.1475422532494914 MAPE: 270.98648892029274 Pearson Correlation: 0.10770672491069783 Spearman Correlation: 0.25419471271095506 Coefficient of Determination: -0.181127467183138 RMSE: 0.21510698575542458 NRMSE: 0.17699908315265747 MAPE: 624.4458908770081 Predictor: RandomForests Pearson Correlation: 0.4204408504993642 Spearman Correlation: 0.38155013256774595 Coefficient of Determination: 0.17584235816615323 RMSE: 0.18856264633511197 NRMSE: 0.14191193570937055 MAPE: 407.97875051638437 Pearson Correlation: 0.15295236629097841 Spearman Correlation: 0.25482125674289846 Coefficient of Determination: -0.20407823566708516 RMSE: 0.21718682836391678 NRMSE: 0.17871046520523065 MAPE: 749.9682708776052 Protein: PTEN x_train_column_count: 2 x_train columns: ['PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.42416906563261264 Spearman Correlation: 0.45794433369899473 Coefficient of Determination: 0.1799193962396437 RMSE: 0.5648570650041206 NRMSE: 0.08832101712205778 MAPE: 328.39215404251604 Pearson Correlation: 0.3802465556917198 Spearman Correlation: 0.34407374890254616 Coefficient of Determination: 0.08593951642891173 RMSE: 0.48915174743554635 NRMSE: 0.16405679750320176 MAPE: 643.511242580416 Predictor: ElasticNet Pearson Correlation: 0.41437855798696227 Spearman Correlation: 0.4527400897115634 Coefficient of Determination: 0.17170730789336397 RMSE: 0.5676781909316566 NRMSE: 0.08876212820446511 MAPE: 339.0046695776132 Pearson Correlation: 0.3654950534124683 Spearman Correlation: 0.3253243585991611 Coefficient of Determination: 0.08470560605835309 RMSE: 0.4894817944451486 NRMSE: 0.16416749209992912 MAPE: 692.1940391356179 Predictor: RandomForests Pearson Correlation: 0.466726010178586 Spearman Correlation: 0.4753913774615105 Coefficient of Determination: 0.21373240225643642 RMSE: 0.5530895898238344 NRMSE: 0.08648105540205368 MAPE: 368.0070173577029 Pearson Correlation: 0.3314358838524452 Spearman Correlation: 0.3269356128219667 Coefficient of Determination: 0.06792532786637973 RMSE: 0.4939483007008637 NRMSE: 0.1656655153947088 MAPE: 785.4197352552937 Protein: BRCA2 x_train_column_count: 2 x_train columns: ['BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.042436828068699355 Spearman Correlation: 0.06477237688313686 Coefficient of Determination: 0.0018008843765322524 RMSE: 0.19514843785952132 NRMSE: 0.12571972160381467 MAPE: 117.14613128531481 Pearson Correlation: -0.08928340042852544 Spearman Correlation: -0.1638669398107502 Coefficient of Determination: -0.02766272476565801 RMSE: 0.19584157678029548 NRMSE: 0.1325645433182129 MAPE: 118.46378786857773 Predictor: ElasticNet Pearson Correlation: 0.040011582892672495 Spearman Correlation: 0.057472501576392276 Coefficient of Determination: 0.0016008465227753677 RMSE: 0.19516799063136472 NRMSE: 0.12573231801022047 MAPE: 118.03800547130696 Pearson Correlation: -0.07561513606008484 Spearman Correlation: -0.13059701492537315 Coefficient of Determination: -0.024457586349982297 RMSE: 0.1955359368375128 NRMSE: 0.13235765660855245 MAPE: 118.73387411095851 Predictor: RandomForests Pearson Correlation: 0.3077670968857318 Spearman Correlation: 0.2559471197183224 Coefficient of Determination: 0.04418964240867662 RMSE: 0.19095997756970787 NRMSE: 0.12302140606842189 MAPE: 126.66158716885236 Pearson Correlation: 0.07485828109476582 Spearman Correlation: 0.04821987727977225 Coefficient of Determination: -0.011707684095326076 RMSE: 0.19431535453633306 NRMSE: 0.13153144831306007 MAPE: 123.3513058769194 Protein: CDKN2A x_train_column_count: 2 x_train columns: ['CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.5040657731519571 Spearman Correlation: 0.47627697631549 Coefficient of Determination: 0.25408230366328044 RMSE: 0.5729080406613378 NRMSE: 0.1295146469224229 MAPE: 150.58184480641245 Pearson Correlation: 0.5570318023649256 Spearman Correlation: 0.57380255584821 Coefficient of Determination: 0.28957905519661165 RMSE: 0.567612340337855 NRMSE: 0.15334243039168333 MAPE: 174.70588681647797 Predictor: ElasticNet Pearson Correlation: 0.5036612591893176 Spearman Correlation: 0.4759909513511134 Coefficient of Determination: 0.2536746635315169 RMSE: 0.5730645649078503 NRMSE: 0.12955003162831474 MAPE: 165.2120812165881 Pearson Correlation: 0.5627834065476419 Spearman Correlation: 0.5756072578285046 Coefficient of Determination: 0.2930601808938539 RMSE: 0.5662199571140928 NRMSE: 0.15296627326401901 MAPE: 173.21988157099673 Predictor: RandomForests Pearson Correlation: 0.6040027516191304 Spearman Correlation: 0.4861296560239233 Coefficient of Determination: 0.36433447381499207 RMSE: 0.528875917565927 NRMSE: 0.11956051035739278 MAPE: 257.31980271784846 Pearson Correlation: 0.6768078158008014 Spearman Correlation: 0.569489990183919 Coefficient of Determination: 0.44303391666723235 RMSE: 0.5025836141073503 NRMSE: 0.13577469583621957 MAPE: 209.43106914074932 Protein: TP53 x_train_column_count: 2 x_train columns: ['TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 0.48818016483087495 Spearman Correlation: 0.4181118202259834 Coefficient of Determination: 0.23831987333430005 RMSE: 0.397379306635346 NRMSE: 0.10643613409276712 MAPE: 384.4843076880141 Pearson Correlation: 0.5142418553541328 Spearman Correlation: 0.4044385913569408 Coefficient of Determination: 0.2573818514375176 RMSE: 0.3527874266078587 NRMSE: 0.11618225806285483 MAPE: 2233.0782832262653 Predictor: ElasticNet Pearson Correlation: 0.47562596722565 Spearman Correlation: 0.40858775442326944 Coefficient of Determination: 0.22018858725916768 RMSE: 0.40208116438786967 NRMSE: 0.10769550405460551 MAPE: 372.27992982137386 Pearson Correlation: 0.5153634061577093 Spearman Correlation: 0.384162520729685 Coefficient of Determination: 0.26095173514475123 RMSE: 0.35193845241842187 NRMSE: 0.11590266834132121 MAPE: 1865.9454447710434 Predictor: RandomForests Pearson Correlation: 0.5587867995287471 Spearman Correlation: 0.47391112149106396 Coefficient of Determination: 0.30699916357554946 RMSE: 0.37904067333120844 NRMSE: 0.1015242194539195 MAPE: 422.75711316796185 Pearson Correlation: 0.5299315765738543 Spearman Correlation: 0.3714748445602258 Coefficient of Determination: 0.27289143154574313 RMSE: 0.349084005370456 NRMSE: 0.11496262320779053 MAPE: 2141.8730565291485 Protein: CTNNB1 x_train_column_count: 2 x_train columns: ['CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.06653317476644441 Spearman Correlation: 0.1176880432626928 Coefficient of Determination: 0.004426663344502146 RMSE: 0.7233771779417462 NRMSE: 0.1422850468020744 MAPE: 606.7838742154084 Pearson Correlation: 0.13956120176564735 Spearman Correlation: 0.1409813676714467 Coefficient of Determination: -0.1109302986244769 RMSE: 0.8079322447309538 NRMSE: 0.2010732049304283 MAPE: 216.76313143789793 Predictor: ElasticNet Pearson Correlation: 0.06641728094381409 Spearman Correlation: 0.11831189699055593 Coefficient of Determination: 0.004411255194572861 RMSE: 0.7233827756513662 NRMSE: 0.14228614784645285 MAPE: 607.002229889947 Pearson Correlation: 0.13956120176564735 Spearman Correlation: 0.1409813676714467 Coefficient of Determination: -0.11076405621511687 RMSE: 0.8078717919607732 NRMSE: 0.2010581598170213 MAPE: 216.9472783981019 Predictor: RandomForests Pearson Correlation: 0.2846108698980282 Spearman Correlation: 0.29112484755208995 Coefficient of Determination: 0.06903793114490742 RMSE: 0.6995103870594284 NRMSE: 0.13759055606991116 MAPE: 631.5545292503399 Pearson Correlation: 0.0711397534338752 Spearman Correlation: 0.14282184909213674 Coefficient of Determination: -0.1285956971281863 RMSE: 0.8143305550615784 NRMSE: 0.20266557702933685 MAPE: 489.1762361982494 Protein: CCNE1 x_train_column_count: 2 x_train columns: ['CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.7299247116090841 Spearman Correlation: 0.7061567494715154 Coefficient of Determination: 0.5327900846176046 RMSE: 0.35051079946653413 NRMSE: 0.08458884558885396 MAPE: 90.83614166716927 Pearson Correlation: 0.7770270702564801 Spearman Correlation: 0.7531411569602966 Coefficient of Determination: 0.46747886325152765 RMSE: 0.30523096808283556 NRMSE: 0.16588729725859142 MAPE: 56.09620217722176 Predictor: ElasticNet Pearson Correlation: 0.7299247116090841 Spearman Correlation: 0.7061567494715154 Coefficient of Determination: 0.5327900830485114 RMSE: 0.35051080005511764 NRMSE: 0.08458884573089694 MAPE: 90.83745445923547 Pearson Correlation: 0.77702707025648 Spearman Correlation: 0.7531411569602966 Coefficient of Determination: 0.46746331306349276 RMSE: 0.30523542458603403 NRMSE: 0.16588971928436244 MAPE: 56.09733643316592 Predictor: RandomForests Pearson Correlation: 0.8577101219397514 Spearman Correlation: 0.7101695638315398 Coefficient of Determination: 0.7317659742467798 RMSE: 0.26558424714779255 NRMSE: 0.06409350270236565 MAPE: 67.88985778990819 Pearson Correlation: 0.8351430823920907 Spearman Correlation: 0.7370836679134409 Coefficient of Determination: 0.6941548923260417 RMSE: 0.2313188038212206 NRMSE: 0.12571742445405715 MAPE: 40.56267191069466 Protein: CCND1 x_train_column_count: 2 x_train columns: ['CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.4247267168184558 Spearman Correlation: 0.39900607291610307 Coefficient of Determination: 0.18039278397938474 RMSE: 0.2161401081741948 NRMSE: 0.1299371825360972 MAPE: 532.8984814701605 Pearson Correlation: 0.2969521452872802 Spearman Correlation: 0.3886206223783046 Coefficient of Determination: 0.08399442139906799 RMSE: 0.22532540558367184 NRMSE: 0.17432490993352096 MAPE: 348.83669163077076 Predictor: ElasticNet Pearson Correlation: 0.42236027416892147 Spearman Correlation: 0.3945270040292828 Coefficient of Determination: 0.1783882011914798 RMSE: 0.2164042628411484 NRMSE: 0.13009598468285125 MAPE: 534.8791099383373 Pearson Correlation: 0.29695214528728026 Spearman Correlation: 0.3886206223783046 Coefficient of Determination: 0.08424001033850803 RMSE: 0.22529519772343282 NRMSE: 0.1743015393663991 MAPE: 350.03340206168946 Predictor: RandomForests Pearson Correlation: 0.5009246505960984 Spearman Correlation: 0.40965593127045014 Coefficient of Determination: 0.2468749440121255 RMSE: 0.20718868121322256 NRMSE: 0.12455584351109315 MAPE: 491.2395482507021 Pearson Correlation: 0.3225095409332167 Spearman Correlation: 0.3839087800361473 Coefficient of Determination: 0.09369217172592081 RMSE: 0.22412947187967547 NRMSE: 0.17339966568644818 MAPE: 339.8668172258049 Protein: ERBB2 x_train_column_count: 2 x_train columns: ['ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.7537853148032354 Spearman Correlation: 0.6558063061456499 Coefficient of Determination: 0.5681923008130128 RMSE: 0.6459554448974096 NRMSE: 0.1159225893970909 MAPE: 208.2828186462033 Pearson Correlation: 0.8100039494045671 Spearman Correlation: 0.500599941469125 Coefficient of Determination: 0.6330601276325525 RMSE: 0.6404058113084755 NRMSE: 0.10910366991643108 MAPE: 800.5737067111246 Predictor: ElasticNet Pearson Correlation: 0.7536423359707011 Spearman Correlation: 0.6630955260861322 Coefficient of Determination: 0.5679767705673081 RMSE: 0.6461166342041273 NRMSE: 0.11595151628665494 MAPE: 210.2020288497246 Pearson Correlation: 0.8108498416783881 Spearman Correlation: 0.5166032582187103 Coefficient of Determination: 0.6340678114731229 RMSE: 0.6395258711716572 NRMSE: 0.10895375763184782 MAPE: 809.0118683090749 Predictor: RandomForests Pearson Correlation: 0.8389294424186139 Spearman Correlation: 0.6674393366047144 Coefficient of Determination: 0.7023030045025691 RMSE: 0.5363454470636926 NRMSE: 0.09625207671225393 MAPE: 280.2953308487788 Pearson Correlation: 0.8161121853257635 Spearman Correlation: 0.5012523821949281 Coefficient of Determination: 0.6428254688684671 RMSE: 0.6318268142679099 NRMSE: 0.10764209657527811 MAPE: 1420.7544425542162 Protein: ERBB3 x_train_column_count: 2 x_train columns: ['ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.41413732939149606 Spearman Correlation: 0.45698503469565566 Coefficient of Determination: 0.17150972759552052 RMSE: 0.40516652442979906 NRMSE: 0.10934281600709196 MAPE: 181.65409597187795 Pearson Correlation: 0.37684036023621476 Spearman Correlation: 0.4409569798068482 Coefficient of Determination: 0.13832976304707245 RMSE: 0.48063127970161784 NRMSE: 0.17738155208043205 MAPE: 302.13924397439155 Predictor: ElasticNet Pearson Correlation: 0.41402025545880733 Spearman Correlation: 0.4574811032948563 Coefficient of Determination: 0.1714127718976779 RMSE: 0.4051902314395225 NRMSE: 0.10934921384858667 MAPE: 181.8364397390754 Pearson Correlation: 0.3821239191505737 Spearman Correlation: 0.4416544727343674 Coefficient of Determination: 0.1427835180208894 RMSE: 0.4793875398664385 NRMSE: 0.17692253804687738 MAPE: 302.11866059431134 Predictor: RandomForests Pearson Correlation: 0.49379269726620445 Spearman Correlation: 0.47011878226411286 Coefficient of Determination: 0.24235048330361064 RMSE: 0.38745745765908807 NRMSE: 0.10456364716462097 MAPE: 216.39720242867088 Pearson Correlation: 0.4332035050690915 Spearman Correlation: 0.44593650227107995 Coefficient of Determination: 0.18582907647625257 RMSE: 0.46719617614868336 NRMSE: 0.1724231991366529 MAPE: 360.2215328744491 Fold: 3 Protein: RB1 x_train_column_count: 2 x_train columns: ['RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.20549008280566838 Spearman Correlation: 0.2819802454315311 Coefficient of Determination: 0.04222617413148044 RMSE: 0.23544695065539922 NRMSE: 0.08610552613202137 MAPE: 195.6825815192432 Pearson Correlation: 0.2140965891071382 Spearman Correlation: 0.27253457025648703 Coefficient of Determination: 0.023470371248125454 RMSE: 0.2190483456261663 NRMSE: 0.1537030366323072 MAPE: 231.77158689364336 Predictor: ElasticNet Pearson Correlation: 0.20536425783313839 Spearman Correlation: 0.28181864803860485 Coefficient of Determination: 0.042174472765042936 RMSE: 0.23545330537322096 NRMSE: 0.08610785012186255 MAPE: 195.91589312380776 Pearson Correlation: 0.2109008845607475 Spearman Correlation: 0.26769161710245765 Coefficient of Determination: 0.022121589206348546 RMSE: 0.2191995681381372 NRMSE: 0.1538091472684348 MAPE: 232.66458705877477 Predictor: RandomForests Pearson Correlation: 0.3152095252059186 Spearman Correlation: 0.3523126286923159 Coefficient of Determination: 0.09183937689922117 RMSE: 0.22926772504859663 NRMSE: 0.08384571571408596 MAPE: 273.73383533728446 Pearson Correlation: 0.22969779464652873 Spearman Correlation: 0.2862101810314933 Coefficient of Determination: 0.02523111481047402 RMSE: 0.2188507776442057 NRMSE: 0.1535644060542864 MAPE: 236.05105884005155 Protein: CDH1 x_train_column_count: 2 x_train columns: ['CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.6311913671046154 Spearman Correlation: 0.601949787752189 Coefficient of Determination: 0.3984025419073933 RMSE: 0.9111357255334679 NRMSE: 0.1450806862095901 MAPE: 503.30373682487266 Pearson Correlation: 0.6707478230465697 Spearman Correlation: 0.47213306899088514 Coefficient of Determination: 0.43406320486557703 RMSE: 0.7083088750599962 NRMSE: 0.13924996560767433 MAPE: 251.88462492469492 Predictor: ElasticNet Pearson Correlation: 0.6047006288621126 Spearman Correlation: 0.6047085796772051 Coefficient of Determination: 0.3613117965935264 RMSE: 0.9388031253308738 NRMSE: 0.14948618281756532 MAPE: 616.771761494779 Pearson Correlation: 0.624045367513959 Spearman Correlation: 0.4723176099452612 Coefficient of Determination: 0.3573478777017606 RMSE: 0.7547909616710694 NRMSE: 0.14838811026443388 MAPE: 300.4667409709188 Predictor: RandomForests Pearson Correlation: 0.7255341506696129 Spearman Correlation: 0.6201341448080985 Coefficient of Determination: 0.5254743555827937 RMSE: 0.8092075444164823 NRMSE: 0.12885060100259263 MAPE: 278.9395763351217 Pearson Correlation: 0.7393813330136257 Spearman Correlation: 0.4674650763382962 Coefficient of Determination: 0.5442785883914165 RMSE: 0.6356066538055941 NRMSE: 0.12495707423536236 MAPE: 181.9962239203982 Protein: CDH2 x_train_column_count: 2 x_train columns: ['CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.14262397191829065 Spearman Correlation: -0.002487806216282824 Coefficient of Determination: 0.020341597365749142 RMSE: 0.377340550380385 NRMSE: 0.13672749850727772 MAPE: 204.88114470054427 Pearson Correlation: 0.1451886540719864 Spearman Correlation: 0.23133206149702618 Coefficient of Determination: 0.013947150404293174 RMSE: 0.32965523283104453 NRMSE: 0.17369656291812158 MAPE: 675.0963371430472 Predictor: ElasticNet Pearson Correlation: 0.1426127701108289 Spearman Correlation: -0.004338932550925531 Coefficient of Determination: 0.020338401793236205 RMSE: 0.3773411658082241 NRMSE: 0.13672772150453805 MAPE: 205.28883418090302 Pearson Correlation: 0.1451886540719864 Spearman Correlation: 0.23133206149702618 Coefficient of Determination: 0.013955124643386663 RMSE: 0.3296538998624512 NRMSE: 0.17369586057203365 MAPE: 675.7746684015143 Predictor: RandomForests Pearson Correlation: 0.23493300907448675 Spearman Correlation: 0.21194477216286742 Coefficient of Determination: 0.04976239614304989 RMSE: 0.3716312713312571 NRMSE: 0.1346587692337333 MAPE: 387.79228301128836 Pearson Correlation: -0.02522530974628973 Spearman Correlation: -0.1851350763201282 Coefficient of Determination: -0.0407518659493773 RMSE: 0.33867526307154056 NRMSE: 0.17844925025372552 MAPE: 642.4010366244271 Protein: CDH3 x_train_column_count: 2 x_train columns: ['CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.302838141362905 Spearman Correlation: 0.33773943741990686 Coefficient of Determination: 0.09171093986413881 RMSE: 0.20253162635642266 NRMSE: 0.14209156027699857 MAPE: 362.0685498012418 Pearson Correlation: 0.22440362464908514 Spearman Correlation: 0.31279442387062184 Coefficient of Determination: 0.02387829200417091 RMSE: 0.1860662070685387 NRMSE: 0.1618431437443255 MAPE: 145.42988268223792 Predictor: ElasticNet Pearson Correlation: 0.3026146976584992 Spearman Correlation: 0.3386347347546788 Coefficient of Determination: 0.09157565485560071 RMSE: 0.20254670881960854 NRMSE: 0.14210214178846645 MAPE: 362.2772318015171 Pearson Correlation: 0.22440362464908511 Spearman Correlation: 0.31279442387062184 Coefficient of Determination: 0.023804995816902097 RMSE: 0.18607319271768477 NRMSE: 0.16184921996545512 MAPE: 145.37234733699452 Predictor: RandomForests Pearson Correlation: 0.38429063561532717 Spearman Correlation: 0.366929487494884 Coefficient of Determination: 0.14614884835263475 RMSE: 0.19636853167347101 NRMSE: 0.13776767390236222 MAPE: 480.79342950124743 Pearson Correlation: 0.27910731531306143 Spearman Correlation: 0.30860684283191253 Coefficient of Determination: 0.0655555461704449 RMSE: 0.1820506628174801 NRMSE: 0.15835036385874218 MAPE: 188.00773874257487 Protein: PTEN x_train_column_count: 2 x_train columns: ['PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 0.4072865131698381 Spearman Correlation: 0.42638558686882855 Coefficient of Determination: 0.16588230381004465 RMSE: 0.5747347789582132 NRMSE: 0.08986549588901778 MAPE: 404.25898339863915 Pearson Correlation: 0.39405604994294663 Spearman Correlation: 0.41017718425416777 Coefficient of Determination: 0.14304763798020403 RMSE: 0.435974310134962 NRMSE: 0.1042352388789179 MAPE: 124.49067922176825 Predictor: ElasticNet Pearson Correlation: 0.3969661291051696 Spearman Correlation: 0.42044539925017116 Coefficient of Determination: 0.15757420110837006 RMSE: 0.5775899661727981 NRMSE: 0.09031193279224425 MAPE: 432.5597707108168 Pearson Correlation: 0.39915569954643837 Spearman Correlation: 0.3968902355390966 Coefficient of Determination: 0.14741678498680844 RMSE: 0.43486148865064544 NRMSE: 0.10396917913514213 MAPE: 116.9819447450473 Predictor: RandomForests Pearson Correlation: 0.4499028394581808 Spearman Correlation: 0.4412973672078478 Coefficient of Determination: 0.19785587470071297 RMSE: 0.5636117187462313 NRMSE: 0.08812629485516868 MAPE: 529.999627248055 Pearson Correlation: 0.36802569178054084 Spearman Correlation: 0.4052177336372629 Coefficient of Determination: 0.13057248218352524 RMSE: 0.439136210575846 NRMSE: 0.10499120417344379 MAPE: 127.15369103812762 Protein: BRCA2 x_train_column_count: 2 x_train columns: ['BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.04179287821102579 Spearman Correlation: 0.01939600332719568 Coefficient of Determination: 0.0017466446691614124 RMSE: 0.18988410127620753 NRMSE: 0.1279783930096026 MAPE: 117.54169381782826 Pearson Correlation: -0.06902629512266363 Spearman Correlation: 0.03567376151822342 Coefficient of Determination: -0.010202916830925668 RMSE: 0.21522102957292763 NRMSE: 0.14803116437483416 MAPE: 114.85888676192783 Predictor: ElasticNet Pearson Correlation: 0.029598716808603837 Spearman Correlation: 0.007235394469500479 Coefficient of Determination: 0.0008759935925667373 RMSE: 0.18996688926006597 NRMSE: 0.12803419058856522 MAPE: 114.87279644470485 Pearson Correlation: -0.01605456565446289 Spearman Correlation: 0.05298569807603587 Coefficient of Determination: -0.0058323765362682245 RMSE: 0.21475495896449218 NRMSE: 0.14771059637558012 MAPE: 112.85176623124009 Predictor: RandomForests Pearson Correlation: 0.2849110177207724 Spearman Correlation: 0.24877779152842033 Coefficient of Determination: 0.043480422447812805 RMSE: 0.18587250235652525 NRMSE: 0.1252746490958707 MAPE: 119.24195656500636 Pearson Correlation: -0.007658302865057336 Spearman Correlation: -0.1128019880749639 Coefficient of Determination: -0.011912642612302848 RMSE: 0.21540307883029233 NRMSE: 0.14815637966441225 MAPE: 156.92480290760244 Protein: CDKN2A x_train_column_count: 2 x_train columns: ['CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.507693343863584 Spearman Correlation: 0.4769078997141356 Coefficient of Determination: 0.2577525314033874 RMSE: 0.5751523859196203 NRMSE: 0.13428100156883177 MAPE: 172.9755121609775 Pearson Correlation: 0.536825509758858 Spearman Correlation: 0.5740296013666005 Coefficient of Determination: 0.28148132808608683 RMSE: 0.5565203157253399 NRMSE: 0.1718132554491494 MAPE: 120.10925571451654 Predictor: ElasticNet Pearson Correlation: 0.5076634573044785 Spearman Correlation: 0.4770131653521852 Coefficient of Determination: 0.25772218539874925 RMSE: 0.5751641430486911 NRMSE: 0.1342837465093134 MAPE: 175.61350329659197 Pearson Correlation: 0.5368255097588579 Spearman Correlation: 0.5740296013666005 Coefficient of Determination: 0.28151153227872994 RMSE: 0.5565086184486104 NRMSE: 0.17180964417542233 MAPE: 120.00745792582296 Predictor: RandomForests Pearson Correlation: 0.6245172571557215 Spearman Correlation: 0.4954089061519607 Coefficient of Determination: 0.3894788522073944 RMSE: 0.5216256263174344 NRMSE: 0.12178409280851568 MAPE: 264.11801229845923 Pearson Correlation: 0.6251797457998285 Spearman Correlation: 0.5733110855363031 Coefficient of Determination: 0.38811166296195954 RMSE: 0.5135681488886652 NRMSE: 0.15855273035369863 MAPE: 124.73179501297591 Protein: TP53 x_train_column_count: 2 x_train columns: ['TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.505393123628269 Spearman Correlation: 0.41983908151648314 Coefficient of Determination: 0.2554222094107388 RMSE: 0.3883974839700309 NRMSE: 0.09334234173757051 MAPE: 785.5119511258362 Pearson Correlation: 0.44399489050955526 Spearman Correlation: 0.4119876806443971 Coefficient of Determination: 0.17360345730876148 RMSE: 0.3913048947996481 NRMSE: 0.14591727410686844 MAPE: 495.7762177532588 Predictor: ElasticNet Pearson Correlation: 0.4922480931927956 Spearman Correlation: 0.40291196652583594 Coefficient of Determination: 0.23687124445461094 RMSE: 0.39320612862244386 NRMSE: 0.09449798813324775 MAPE: 691.4031140000773 Pearson Correlation: 0.4393370240450394 Spearman Correlation: 0.41330939288519813 Coefficient of Determination: 0.17252362896593754 RMSE: 0.39156046470676936 NRMSE: 0.1460125759154747 MAPE: 447.62210680416683 Predictor: RandomForests Pearson Correlation: 0.5623094510875953 Spearman Correlation: 0.47048895812635816 Coefficient of Determination: 0.3097778302986154 RMSE: 0.3739519663833114 NRMSE: 0.08987069607866173 MAPE: 682.725921080577 Pearson Correlation: 0.4718926826594622 Spearman Correlation: 0.4533407801460297 Coefficient of Determination: 0.21127649970614626 RMSE: 0.38228162652909115 NRMSE: 0.14255250477463507 MAPE: 388.2496282805142 Protein: CTNNB1 x_train_column_count: 2 x_train columns: ['CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.051787596630752775 Spearman Correlation: 0.07970674194829598 Coefficient of Determination: 0.002681955164789862 RMSE: 0.7681652712541103 NRMSE: 0.15109466389734663 MAPE: 433.4860556646889 Pearson Correlation: 0.21972783891735956 Spearman Correlation: 0.26859935909425303 Coefficient of Determination: 0.009533031869933262 RMSE: 0.6100416416125433 NRMSE: 0.1994317047345592 MAPE: 1336.6191149722124 Predictor: ElasticNet Pearson Correlation: 0.051747475666367275 Spearman Correlation: 0.07873234122650967 Coefficient of Determination: 0.002677801229203358 RMSE: 0.7681668709974171 NRMSE: 0.1510949785596808 MAPE: 433.42687505377376 Pearson Correlation: 0.21972783891735959 Spearman Correlation: 0.26859935909425303 Coefficient of Determination: 0.00957424818110808 RMSE: 0.6100289486462351 NRMSE: 0.1994275552146965 MAPE: 1336.3305423296326 Predictor: RandomForests Pearson Correlation: 0.28283871709746194 Spearman Correlation: 0.27248155031404964 Coefficient of Determination: 0.056911975463831976 RMSE: 0.7469885508843376 NRMSE: 0.14692929797095547 MAPE: 449.58995100093125 Pearson Correlation: 0.20590790949456775 Spearman Correlation: 0.1399556799237513 Coefficient of Determination: 0.026453487374958562 RMSE: 0.6048084295659103 NRMSE: 0.1977208897204584 MAPE: 1426.5538436896502 Protein: CCNE1 x_train_column_count: 2 x_train columns: ['CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.7311597617400973 Spearman Correlation: 0.7252454530166649 Coefficient of Determination: 0.534594597187836 RMSE: 0.3564002360438114 NRMSE: 0.08601014456737008 MAPE: 77.47995130978394 Pearson Correlation: 0.6686208249928276 Spearman Correlation: 0.6712078704223245 Coefficient of Determination: 0.4364774974494381 RMSE: 0.27391509441277184 NRMSE: 0.11931658945540438 MAPE: 97.29074571714722 Predictor: ElasticNet Pearson Correlation: 0.7311550781020142 Spearman Correlation: 0.724580992574438 Coefficient of Determination: 0.5345877466043218 RMSE: 0.3564028590694382 NRMSE: 0.08601077758270101 MAPE: 77.48483952107688 Pearson Correlation: 0.6686208249928275 Spearman Correlation: 0.6712078704223245 Coefficient of Determination: 0.4364873185214214 RMSE: 0.2739127075057997 NRMSE: 0.11931554972592225 MAPE: 97.2839269864578 Predictor: RandomForests Pearson Correlation: 0.8620576959955392 Spearman Correlation: 0.7260197277689745 Coefficient of Determination: 0.7409729273935419 RMSE: 0.26588562094289714 NRMSE: 0.06416623330426845 MAPE: 55.85462183805717 Pearson Correlation: 0.7693889488812767 Spearman Correlation: 0.6683249776710507 Coefficient of Determination: 0.5225628425841873 RMSE: 0.25212646899839464 NRMSE: 0.10982552990303378 MAPE: 78.16212414126768 Protein: CCND1 x_train_column_count: 2 x_train columns: ['CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.4104199362628022 Spearman Correlation: 0.40702588796834765 Coefficient of Determination: 0.16844452408196253 RMSE: 0.2231013144804463 NRMSE: 0.13412205845814423 MAPE: 532.0448309434951 Pearson Correlation: 0.3721019412428963 Spearman Correlation: 0.3490592152021846 Coefficient of Determination: 0.11233592807704806 RMSE: 0.197608097567355 NRMSE: 0.18724768325296826 MAPE: 345.7158784675023 Predictor: ElasticNet Pearson Correlation: 0.4104199362628022 Spearman Correlation: 0.40702588796834765 Coefficient of Determination: 0.16844452407777666 RMSE: 0.2231013144810078 NRMSE: 0.13412205845848182 MAPE: 532.0452559001382 Pearson Correlation: 0.3721019412428963 Spearman Correlation: 0.3490592152021846 Coefficient of Determination: 0.11233569761335793 RMSE: 0.1976081232197892 NRMSE: 0.18724770756046846 MAPE: 345.71646825965604 Predictor: RandomForests Pearson Correlation: 0.48699822442771834 Spearman Correlation: 0.43302356100040734 Coefficient of Determination: 0.2329800130729628 RMSE: 0.21426925304637665 NRMSE: 0.12881247853601416 MAPE: 532.0829627883396 Pearson Correlation: 0.3682241478957792 Spearman Correlation: 0.3545397794492318 Coefficient of Determination: 0.12538407752351843 RMSE: 0.19615035827191662 NRMSE: 0.18586637191391944 MAPE: 242.12255902019984 Protein: ERBB2 x_train_column_count: 2 x_train columns: ['ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 0.7577714831756105 Spearman Correlation: 0.6100374255569257 Coefficient of Determination: 0.5742176207141645 RMSE: 0.6402754959744398 NRMSE: 0.10908146855451553 MAPE: 317.3842681597517 Pearson Correlation: 0.7896049001679224 Spearman Correlation: 0.6822013768273945 Coefficient of Determination: 0.6161032986933297 RMSE: 0.6608224721923278 NRMSE: 0.11920457323622337 MAPE: 140.9130631786231 Predictor: ElasticNet Pearson Correlation: 0.7576307424036322 Spearman Correlation: 0.6175542476381123 Coefficient of Determination: 0.574004341835005 RMSE: 0.640435836268354 NRMSE: 0.10910878516250473 MAPE: 320.7123220309669 Pearson Correlation: 0.7901604979795926 Spearman Correlation: 0.693151651706485 Coefficient of Determination: 0.6172624351920195 RMSE: 0.6598240753311013 NRMSE: 0.1190244742281372 MAPE: 141.84184829396668 Predictor: RandomForests Pearson Correlation: 0.819999050484025 Spearman Correlation: 0.6221160255281639 Coefficient of Determination: 0.670233501848126 RMSE: 0.5634771446431789 NRMSE: 0.09599760543863893 MAPE: 549.6016379139869 Pearson Correlation: 0.8604407371645878 Spearman Correlation: 0.6851291397706071 Coefficient of Determination: 0.7380335646767575 RMSE: 0.5458840920255202 NRMSE: 0.09847104625613685 MAPE: 202.52741537438453 Protein: ERBB3 x_train_column_count: 2 x_train columns: ['ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.41551681493496545 Spearman Correlation: 0.4488994615192051 Coefficient of Determination: 0.1726542234936983 RMSE: 0.41022704953773176 NRMSE: 0.14874778344799855 MAPE: 207.48876867550993 Pearson Correlation: 0.3928885858038079 Spearman Correlation: 0.4288257958328658 Coefficient of Determination: 0.12949497157397405 RMSE: 0.4615796450969211 NRMSE: 0.12833242374280146 MAPE: 147.5887246295261 Predictor: ElasticNet Pearson Correlation: 0.4118347805352838 Spearman Correlation: 0.4548855783210745 Coefficient of Determination: 0.16960788642884905 RMSE: 0.41098159597773126 NRMSE: 0.14902138098522819 MAPE: 205.93491786104846 Pearson Correlation: 0.39517943353034346 Spearman Correlation: 0.4259180289031036 Coefficient of Determination: 0.13282001253745668 RMSE: 0.46069726098489505 NRMSE: 0.12808709556819212 MAPE: 147.06531071346663 Predictor: RandomForests Pearson Correlation: 0.4999772787130883 Spearman Correlation: 0.47145580278027005 Coefficient of Determination: 0.24936566604040078 RMSE: 0.39074639408774725 NRMSE: 0.14168412364895636 MAPE: 239.36369085083874 Pearson Correlation: 0.40632927276753494 Spearman Correlation: 0.4286995163716889 Coefficient of Determination: 0.13799826967697426 RMSE: 0.45931970330957334 NRMSE: 0.1277040948938829 MAPE: 166.28304846884032 Fold: 4 Protein: RB1 x_train_column_count: 2 x_train columns: ['RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.20060692894164192 Spearman Correlation: 0.2604016377206075 Coefficient of Determination: 0.04024313993939688 RMSE: 0.24639807895111004 NRMSE: 0.0901104735777904 MAPE: 268.4745845730759 Pearson Correlation: 0.3019690157807047 Spearman Correlation: 0.3648499357847355 Coefficient of Determination: 0.0002383205805432942 RMSE: 0.16486270055052632 NRMSE: 0.15795682802909433 MAPE: 110.55468116716203 Predictor: ElasticNet Pearson Correlation: 0.20060321424304423 Spearman Correlation: 0.2604333098848863 Coefficient of Determination: 0.04024164460534618 RMSE: 0.2463982708993572 NRMSE: 0.09011054377536469 MAPE: 268.3497274814239 Pearson Correlation: 0.30291776516862734 Spearman Correlation: 0.3658524420503997 Coefficient of Determination: 0.0009300459157621788 RMSE: 0.16480565723624552 NRMSE: 0.15790217418105001 MAPE: 110.47272546768954 Predictor: RandomForests Pearson Correlation: 0.33587973872955107 Spearman Correlation: 0.36911122268200713 Coefficient of Determination: 0.09983840079293904 RMSE: 0.23862555200044613 NRMSE: 0.08726797542438786 MAPE: 320.43761060518545 Pearson Correlation: 0.24547585772582137 Spearman Correlation: 0.34021236661701987 Coefficient of Determination: -0.038688053316477955 RMSE: 0.16804157162155683 NRMSE: 0.16100254054876484 MAPE: 112.68516338634271 Protein: CDH1 x_train_column_count: 2 x_train columns: ['CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 0.628356173725978 Spearman Correlation: 0.6043608023599538 Coefficient of Determination: 0.39483148105955135 RMSE: 0.8705077411210568 NRMSE: 0.1386114679661566 MAPE: 525.2992992842647 Pearson Correlation: 0.6594828350563262 Spearman Correlation: 0.4286861432187434 Coefficient of Determination: 0.40975344237495814 RMSE: 0.8961522253801608 NRMSE: 0.1625761448024674 MAPE: 266.14079405117417 Predictor: ElasticNet Pearson Correlation: 0.602058253037068 Spearman Correlation: 0.6048526071103854 Coefficient of Determination: 0.35867610909024106 RMSE: 0.896134470226411 NRMSE: 0.14269202736002212 MAPE: 634.1236044648291 Pearson Correlation: 0.5833730633620747 Spearman Correlation: 0.4375939849624061 Coefficient of Determination: 0.31723602849283805 RMSE: 0.9638298094971988 NRMSE: 0.1748539257460177 MAPE: 320.6034833122145 Predictor: RandomForests Pearson Correlation: 0.7170868613481379 Spearman Correlation: 0.6164999574023463 Coefficient of Determination: 0.5134008218156312 RMSE: 0.7805849239532742 NRMSE: 0.12429300403701699 MAPE: 350.21685279617446 Pearson Correlation: 0.7534410121952042 Spearman Correlation: 0.4433914078848621 Coefficient of Determination: 0.5171438694520781 RMSE: 0.810539027555178 NRMSE: 0.14704456071172636 MAPE: 167.69272835039988 Protein: CDH2 x_train_column_count: 2 x_train columns: ['CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.12726667220597057 Spearman Correlation: 0.07119849272849263 Coefficient of Determination: 0.01619680585438199 RMSE: 0.37627875453652904 NRMSE: 0.1363427619887416 MAPE: 647.1392020301222 Pearson Correlation: 0.20599048693772695 Spearman Correlation: -0.07145475629371938 Coefficient of Determination: -0.01867412055318085 RMSE: 0.3363643732494896 NRMSE: 0.17351965109234532 MAPE: 149.99280153684538 Predictor: ElasticNet Pearson Correlation: 0.12726575412288096 Spearman Correlation: 0.07146547137499795 Coefficient of Determination: 0.016196571640589186 RMSE: 0.37627879932682323 NRMSE: 0.1363427782182851 MAPE: 647.0576024219794 Pearson Correlation: 0.20599048693772695 Spearman Correlation: -0.07145475629371938 Coefficient of Determination: -0.018663364567124807 RMSE: 0.3363625974411198 NRMSE: 0.1735187350094506 MAPE: 149.979760948571 Predictor: RandomForests Pearson Correlation: 0.20068017063291904 Spearman Correlation: 0.19591540058773488 Coefficient of Determination: 0.035911956927223376 RMSE: 0.37248941165378463 NRMSE: 0.13496971217254317 MAPE: 884.409767131594 Pearson Correlation: 0.13975849733951237 Spearman Correlation: -0.007879855739278996 Coefficient of Determination: -0.03649031714906359 RMSE: 0.33929306149406074 NRMSE: 0.1750304679408922 MAPE: 184.58079283105226 Protein: CDH3 x_train_column_count: 2 x_train columns: ['CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.25979163381132686 Spearman Correlation: 0.33119749144119476 Coefficient of Determination: 0.06749169299835855 RMSE: 0.19884009086432752 NRMSE: 0.14171079925333718 MAPE: 172.25145757408006 Pearson Correlation: 0.40672511917214194 Spearman Correlation: 0.3183905036222397 Coefficient of Determination: 0.038834476097896364 RMSE: 0.20372141380738001 NRMSE: 0.1813210155467362 MAPE: 583.0807418997694 Predictor: ElasticNet Pearson Correlation: 0.25854027328459467 Spearman Correlation: 0.3309265441567785 Coefficient of Determination: 0.06684307254477051 RMSE: 0.19890923198065136 NRMSE: 0.14176007524598497 MAPE: 172.40226966614551 Pearson Correlation: 0.4135532481751863 Spearman Correlation: 0.3220264591827829 Coefficient of Determination: 0.04253292702053457 RMSE: 0.20332908812048964 NRMSE: 0.18097182843556045 MAPE: 586.7738689126844 Predictor: RandomForests Pearson Correlation: 0.3661650806172687 Spearman Correlation: 0.35439273671084043 Coefficient of Determination: 0.13219300783029397 RMSE: 0.19181791710406904 NRMSE: 0.13670618548688587 MAPE: 233.9258036788603 Pearson Correlation: 0.3409632548764403 Spearman Correlation: 0.30228083799903893 Coefficient of Determination: 0.027424343098695014 RMSE: 0.20492704927339866 NRMSE: 0.18239408412108035 MAPE: 815.7562828804256 Protein: PTEN x_train_column_count: 2 x_train columns: ['PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 0.39878139984580147 Spearman Correlation: 0.4180860156644668 Coefficient of Determination: 0.15902660486297693 RMSE: 0.5151792949664966 NRMSE: 0.09965554297556806 MAPE: 256.2479847170032 Pearson Correlation: 0.4569385031545299 Spearman Correlation: 0.4803975111909126 Coefficient of Determination: 0.1711906664926538 RMSE: 0.6787604679974606 NRMSE: 0.10613094644632329 MAPE: 583.3344326217799 Predictor: ElasticNet Pearson Correlation: 0.39770673577924787 Spearman Correlation: 0.4125541754874478 Coefficient of Determination: 0.15817064722837793 RMSE: 0.5154414075987979 NRMSE: 0.09970624566674363 MAPE: 259.1569919992023 Pearson Correlation: 0.4352330047258671 Spearman Correlation: 0.4688213069988404 Coefficient of Determination: 0.158047575125432 RMSE: 0.6841211228923064 NRMSE: 0.10696913812716854 MAPE: 602.3329805555614 Predictor: RandomForests Pearson Correlation: 0.4478237093284196 Spearman Correlation: 0.4392056931844835 Coefficient of Determination: 0.19412017651037705 RMSE: 0.5043156127290602 NRMSE: 0.09755408788476096 MAPE: 267.2985539429079 Pearson Correlation: 0.43694710197252795 Spearman Correlation: 0.47224052214471246 Coefficient of Determination: 0.1541743166419286 RMSE: 0.685692908536918 NRMSE: 0.10721490243716957 MAPE: 505.48158517052127 Protein: BRCA2 x_train_column_count: 2 x_train columns: ['BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.0313554002392283 Spearman Correlation: 0.022070337100895607 Coefficient of Determination: 0.0009831611241620797 RMSE: 0.1917029603855912 NRMSE: 0.12350005500762842 MAPE: 112.56460310840531 Pearson Correlation: -0.1504621728932167 Spearman Correlation: -0.17513185949949503 Coefficient of Determination: -0.009292734561542115 RMSE: 0.20907209366483526 NRMSE: 0.20311868500727212 MAPE: 147.09577718569938 Predictor: ElasticNet Pearson Correlation: 0.02188802695411087 Spearman Correlation: 0.01572029885733223 Coefficient of Determination: 0.000479004062040711 RMSE: 0.19175132604227565 NRMSE: 0.12353121342713845 MAPE: 111.88965071418625 Pearson Correlation: -0.17899779266858884 Spearman Correlation: -0.15346076634372002 Coefficient of Determination: -0.006782440963589265 RMSE: 0.20881193173908402 NRMSE: 0.20286593129288943 MAPE: 141.75386815240824 Predictor: RandomForests Pearson Correlation: 0.29655276349912 Spearman Correlation: 0.22726838369478033 Coefficient of Determination: 0.043457546176612016 RMSE: 0.1875834591496981 NRMSE: 0.12084616469621395 MAPE: 118.91691027594236 Pearson Correlation: -0.017904957737888395 Spearman Correlation: -0.025811139021213243 Coefficient of Determination: -0.009008578168265391 RMSE: 0.20904266050231404 NRMSE: 0.20309008996542738 MAPE: 117.9011717023568 Protein: CDKN2A x_train_column_count: 2 x_train columns: ['CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.5089221041870784 Spearman Correlation: 0.5041911579291467 Coefficient of Determination: 0.2590017081302034 RMSE: 0.5801489558247752 NRMSE: 0.13115156681920992 MAPE: 149.93930972745514 Pearson Correlation: 0.5446033666939744 Spearman Correlation: 0.4884824000299256 Coefficient of Determination: 0.2777407009263907 RMSE: 0.5359847673250288 NRMSE: 0.16148983649443469 MAPE: 114.82947426453738 Predictor: ElasticNet Pearson Correlation: 0.5089092587161527 Spearman Correlation: 0.5043429685491743 Coefficient of Determination: 0.2589886331400336 RMSE: 0.5801540741958406 NRMSE: 0.13115272390546864 MAPE: 151.7030582329283 Pearson Correlation: 0.5446033666939745 Spearman Correlation: 0.4884824000299256 Coefficient of Determination: 0.27768600309880576 RMSE: 0.5360050624236108 NRMSE: 0.16149595131774958 MAPE: 114.75142807953264 Predictor: RandomForests Pearson Correlation: 0.6315021316579708 Spearman Correlation: 0.5175085850702341 Coefficient of Determination: 0.39829848360987263 RMSE: 0.5227830094552866 NRMSE: 0.11818311505714627 MAPE: 286.8091880382585 Pearson Correlation: 0.6229828385819468 Spearman Correlation: 0.48235825210423916 Coefficient of Determination: 0.3606879562454919 RMSE: 0.5042690563417233 NRMSE: 0.1519340332454725 MAPE: 126.41263181421061 Protein: TP53 x_train_column_count: 2 x_train columns: ['TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 0.4860893149117717 Spearman Correlation: 0.4243656276327849 Coefficient of Determination: 0.2362828220713954 RMSE: 0.3933632479692207 NRMSE: 0.09453574813006986 MAPE: 828.1545630718925 Pearson Correlation: 0.5182851011843875 Spearman Correlation: 0.3708300602251899 Coefficient of Determination: 0.2663495972611568 RMSE: 0.3698619384945788 NRMSE: 0.11737177535369979 MAPE: 312.66501479205846 Predictor: ElasticNet Pearson Correlation: 0.4732734781201166 Spearman Correlation: 0.4088174844683577 Coefficient of Determination: 0.21855144189120412 RMSE: 0.3979034445787518 NRMSE: 0.09562687925468683 MAPE: 740.2098917978319 Pearson Correlation: 0.5213930546825694 Spearman Correlation: 0.37149839773563265 Coefficient of Determination: 0.2514164749417289 RMSE: 0.37360716269882566 NRMSE: 0.1185602826538543 MAPE: 251.7792195842215 Predictor: RandomForests Pearson Correlation: 0.5433299028550151 Spearman Correlation: 0.47716216341157186 Coefficient of Determination: 0.28875859293730977 RMSE: 0.3796085782752249 NRMSE: 0.09123013176525473 MAPE: 734.2104172925882 Pearson Correlation: 0.573766741233823 Spearman Correlation: 0.4235391959329385 Coefficient of Determination: 0.3114762468831195 RMSE: 0.35830636664522525 NRMSE: 0.11370473681303161 MAPE: 259.9091372224781 Protein: CTNNB1 x_train_column_count: 2 x_train columns: ['CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.108436303571539 Spearman Correlation: 0.1359617506577901 Coefficient of Determination: 0.011758431932259117 RMSE: 0.7072318312612121 NRMSE: 0.17081244113158445 MAPE: 573.7039748296245 Pearson Correlation: -0.09138017300424375 Spearman Correlation: 0.03373358770059477 Coefficient of Determination: -0.1681635116379343 RMSE: 0.8673055149001679 NRMSE: 0.18234494888995204 MAPE: 970.4637210419448 Predictor: ElasticNet Pearson Correlation: 0.10830589448220491 Spearman Correlation: 0.13480386712524542 Coefficient of Determination: 0.011730166768875172 RMSE: 0.7072419451245493 NRMSE: 0.17081488385773097 MAPE: 573.4573290631525 Pearson Correlation: -0.09138017300424374 Spearman Correlation: 0.03373358770059477 Coefficient of Determination: -0.16796966211836417 RMSE: 0.8672335499178745 NRMSE: 0.18232981875323237 MAPE: 970.1367588323346 Predictor: RandomForests Pearson Correlation: 0.27073272495551043 Spearman Correlation: 0.25332746502304954 Coefficient of Determination: 0.05488063472280302 RMSE: 0.6916295995789115 NRMSE: 0.16704415022193786 MAPE: 598.8045248717256 Pearson Correlation: 0.07267382808851819 Spearman Correlation: 0.13823949839064295 Coefficient of Determination: -0.133416084696651 RMSE: 0.8543089877843627 NRMSE: 0.17961251950726656 MAPE: 916.3275962998433 Protein: CCNE1 x_train_column_count: 2 x_train columns: ['CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.7284683731401491 Spearman Correlation: 0.7111124100209031 Coefficient of Determination: 0.5306661706654558 RMSE: 0.34583107511272226 NRMSE: 0.08345948671784209 MAPE: 76.12249959628303 Pearson Correlation: 0.8235508887291155 Spearman Correlation: 0.7249192633324606 Coefficient of Determination: 0.4773065355083249 RMSE: 0.32685155153597323 NRMSE: 0.13337613300251908 MAPE: 111.11785800324698 Predictor: ElasticNet Pearson Correlation: 0.7284659471489122 Spearman Correlation: 0.7105645817584747 Coefficient of Determination: 0.5306626345345026 RMSE: 0.3458323779185179 NRMSE: 0.08345980112424112 MAPE: 76.12616468363554 Pearson Correlation: 0.8235508887291156 Spearman Correlation: 0.7249192633324606 Coefficient of Determination: 0.47726996160433044 RMSE: 0.32686298656335566 NRMSE: 0.13338079921788776 MAPE: 111.11379686950973 Predictor: RandomForests Pearson Correlation: 0.8558319038801104 Spearman Correlation: 0.7158571558170889 Coefficient of Determination: 0.7288377951807345 RMSE: 0.26286796528567175 NRMSE: 0.06343798182437718 MAPE: 55.5244048092431 Pearson Correlation: 0.8456838474620257 Spearman Correlation: 0.7088274541368929 Coefficient of Determination: 0.7022821756292825 RMSE: 0.24667744086523613 NRMSE: 0.10066001830785773 MAPE: 69.87901290517232 Protein: CCND1 x_train_column_count: 2 x_train columns: ['CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 0.36851300129301223 Spearman Correlation: 0.3770817368013094 Coefficient of Determination: 0.1358018321219837 RMSE: 0.22339496125150415 NRMSE: 0.14272432070348204 MAPE: 535.7883211967126 Pearson Correlation: 0.6012892043958128 Spearman Correlation: 0.49870696642102774 Coefficient of Determination: 0.2640304431782867 RMSE: 0.19645763795204482 NRMSE: 0.12390113392535623 MAPE: 466.48624547544284 Predictor: ElasticNet Pearson Correlation: 0.36603283831856076 Spearman Correlation: 0.3728160125831736 Coefficient of Determination: 0.13398003872291553 RMSE: 0.22363030380429894 NRMSE: 0.14287467819494953 MAPE: 537.6681012207774 Pearson Correlation: 0.6012892043958127 Spearman Correlation: 0.49870696642102774 Coefficient of Determination: 0.2634887612216068 RMSE: 0.19652992218093315 NRMSE: 0.12394672185982163 MAPE: 467.70426815126126 Predictor: RandomForests Pearson Correlation: 0.4536960474814516 Spearman Correlation: 0.39958941232777434 Coefficient of Determination: 0.2019813527443235 RMSE: 0.2146709224136968 NRMSE: 0.1371506385132421 MAPE: 504.6727797801616 Pearson Correlation: 0.5244663896500243 Spearman Correlation: 0.5018856606099847 Coefficient of Determination: 0.2568204270681399 RMSE: 0.1974176032612837 NRMSE: 0.12450656108809517 MAPE: 425.3854561538555 Protein: ERBB2 x_train_column_count: 2 x_train columns: ['ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 0.76820819239096 Spearman Correlation: 0.6162165032172298 Coefficient of Determination: 0.590143826856586 RMSE: 0.6279242487374764 NRMSE: 0.10697723030776299 MAPE: 241.54847020287775 Pearson Correlation: 0.7616187596336663 Spearman Correlation: 0.6420536940037835 Coefficient of Determination: 0.5262982087977873 RMSE: 0.713495742528176 NRMSE: 0.128479083539485 MAPE: 138.43731356115447 Predictor: ElasticNet Pearson Correlation: 0.7679926094943188 Spearman Correlation: 0.6238582415521245 Coefficient of Determination: 0.5898126482378236 RMSE: 0.6281778902673147 NRMSE: 0.1070204423168671 MAPE: 245.3213005697257 Pearson Correlation: 0.7633533110364072 Spearman Correlation: 0.67230847305938 Coefficient of Determination: 0.5282240218749861 RMSE: 0.7120439232115906 NRMSE: 0.12821765462808202 MAPE: 138.24384486469526 Predictor: RandomForests Pearson Correlation: 0.837912110164944 Spearman Correlation: 0.6242468308358713 Coefficient of Determination: 0.7012149842957249 RMSE: 0.5361310018094477 NRMSE: 0.09133873993721106 MAPE: 438.3412943231485 Pearson Correlation: 0.7903040042412042 Spearman Correlation: 0.6588300179349611 Coefficient of Determination: 0.5700413694558568 RMSE: 0.6797546826519252 NRMSE: 0.12240333537147066 MAPE: 216.94371412894742 Protein: ERBB3 x_train_column_count: 2 x_train columns: ['ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.4273351658974776 Spearman Correlation: 0.4720962329906372 Coefficient of Determination: 0.18261534401262436 RMSE: 0.4318996827136457 NRMSE: 0.11809604716015458 MAPE: 214.16240623612248 Pearson Correlation: 0.32144555613857656 Spearman Correlation: 0.3196972530829562 Coefficient of Determination: 0.05426262057332676 RMSE: 0.3740011144567562 NRMSE: 0.1840855623485882 MAPE: 195.28806863141347 Predictor: ElasticNet Pearson Correlation: 0.4247436800277296 Spearman Correlation: 0.47559620013365334 Coefficient of Determination: 0.18040719369690272 RMSE: 0.4324826739539047 NRMSE: 0.11825545677252336 MAPE: 212.58759016688913 Pearson Correlation: 0.3203755812394411 Spearman Correlation: 0.3203655905933989 Coefficient of Determination: 0.05473825693353351 RMSE: 0.3739070550992104 NRMSE: 0.18403926577604157 MAPE: 193.7204812200924 Predictor: RandomForests Pearson Correlation: 0.5017575914848379 Spearman Correlation: 0.4921605147487151 Coefficient of Determination: 0.2503000193256526 RMSE: 0.41363129949439237 NRMSE: 0.11310085051484675 MAPE: 238.28030543478857 Pearson Correlation: 0.4041323955475392 Spearman Correlation: 0.32032765592468015 Coefficient of Determination: 0.13857368373267354 RMSE: 0.3569412060034264 NRMSE: 0.1756885744256825 MAPE: 237.4408613379951 Fold: 5 Protein: RB1 x_train_column_count: 2 x_train columns: ['RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.2008549690271501 Spearman Correlation: 0.2752781534619621 Coefficient of Determination: 0.04034271858289751 RMSE: 0.2291383097824755 NRMSE: 0.11319776398061263 MAPE: 189.7845976587256 Pearson Correlation: 0.20388375085778998 Spearman Correlation: 0.27589122058878546 Coefficient of Determination: -0.05165042013578813 RMSE: 0.2464989567972049 NRMSE: 0.12428602383740642 MAPE: 398.83457702169636 Predictor: ElasticNet Pearson Correlation: 0.19578397808916828 Spearman Correlation: 0.27154453701595577 Coefficient of Determination: 0.03833136053280506 RMSE: 0.22937831105947948 NRMSE: 0.11331632821343397 MAPE: 190.61928493039167 Pearson Correlation: 0.22446261577437424 Spearman Correlation: 0.28244990585917534 Coefficient of Determination: -0.044185956830937734 RMSE: 0.24562259189312707 NRMSE: 0.1238441562093495 MAPE: 394.21266644354876 Predictor: RandomForests Pearson Correlation: 0.31485917689054416 Spearman Correlation: 0.35980883320861423 Coefficient of Determination: 0.09143497772665987 RMSE: 0.22295521264550094 NRMSE: 0.11014322119793744 MAPE: 211.11353689620057 Pearson Correlation: 0.21073876889670415 Spearman Correlation: 0.23734088200910924 Coefficient of Determination: -0.048930325756177284 RMSE: 0.24617996555346097 NRMSE: 0.12412518683493384 MAPE: 529.0963669136031 Protein: CDH1 x_train_column_count: 2 x_train columns: ['CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.6708049982918738 Spearman Correlation: 0.5863907407236872 Coefficient of Determination: 0.44997934573336096 RMSE: 0.8351336136424325 NRMSE: 0.1329788245027917 MAPE: 239.97315127050138 Pearson Correlation: 0.4947900491430656 Spearman Correlation: 0.5419893016122396 Coefficient of Determination: 0.23097867498219748 RMSE: 1.0187814848685817 NRMSE: 0.20034640122486908 MAPE: 1057.7388099624372 Predictor: ElasticNet Pearson Correlation: 0.6379833219483108 Spearman Correlation: 0.5884001892777856 Coefficient of Determination: 0.4005452022008993 RMSE: 0.8718558485225365 NRMSE: 0.13882612791352766 MAPE: 283.7465179830132 Pearson Correlation: 0.503671481312943 Spearman Correlation: 0.5419893016122396 Coefficient of Determination: 0.24873447932357606 RMSE: 1.006951563950095 NRMSE: 0.19802001218266996 MAPE: 1432.1262905662782 Predictor: RandomForests Pearson Correlation: 0.752527698805492 Spearman Correlation: 0.5997030844442153 Coefficient of Determination: 0.5655603073095317 RMSE: 0.7422175409284361 NRMSE: 0.11818374270380497 MAPE: 167.71007551694782 Pearson Correlation: 0.6207617657985194 Spearman Correlation: 0.5415000057010412 Coefficient of Determination: 0.37224542865460575 RMSE: 0.9204639713007754 NRMSE: 0.18101197052187282 MAPE: 664.1049782598297 Protein: CDH2 x_train_column_count: 2 x_train columns: ['CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.13779348913082884 Spearman Correlation: 0.08045708714407543 Coefficient of Determination: 0.018987045646847833 RMSE: 0.355710597573835 NRMSE: 0.17470192896902656 MAPE: 223.60576997937054 Pearson Correlation: 0.1537883558217415 Spearman Correlation: -0.1015076266632875 Coefficient of Determination: 0.003933247704367537 RMSE: 0.4162705035251315 NRMSE: 0.1556646050240755 MAPE: 219.44314124904793 Predictor: ElasticNet Pearson Correlation: 0.13776475523400486 Spearman Correlation: 0.07886292148061753 Coefficient of Determination: 0.01897912689749548 RMSE: 0.3557120332212275 NRMSE: 0.17470263406572736 MAPE: 224.04087181335765 Pearson Correlation: 0.15378835582174144 Spearman Correlation: -0.1015076266632875 Coefficient of Determination: 0.0039722515057042385 RMSE: 0.4162623533228833 NRMSE: 0.1556615572510455 MAPE: 221.09098232805096 Predictor: RandomForests Pearson Correlation: 0.22256805431603133 Spearman Correlation: 0.23310447235810897 Coefficient of Determination: 0.04505475310564411 RMSE: 0.3509527652907008 NRMSE: 0.17236519094872588 MAPE: 516.3906532757959 Pearson Correlation: 0.026135634300607852 Spearman Correlation: 0.01272366311076386 Coefficient of Determination: -0.02965335260008506 RMSE: 0.42323047837424443 NRMSE: 0.15826729180272028 MAPE: 421.1178441241013 Protein: CDH3 x_train_column_count: 2 x_train columns: ['CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.29134736531777045 Spearman Correlation: 0.340226826258159 Coefficient of Determination: 0.08488328727760619 RMSE: 0.1949277980846216 NRMSE: 0.13675688814378234 MAPE: 331.69152539794464 Pearson Correlation: 0.2659003010342307 Spearman Correlation: 0.2940460604246936 Coefficient of Determination: 0.0663678352834659 RMSE: 0.21585186059783473 NRMSE: 0.19474360161841475 MAPE: 122.57887592000756 Predictor: ElasticNet Pearson Correlation: 0.29131399778415085 Spearman Correlation: 0.34098087037844793 Coefficient of Determination: 0.08486384490706 RMSE: 0.19492986877041393 NRMSE: 0.1367583408896096 MAPE: 331.7803947121274 Pearson Correlation: 0.2652922331797278 Spearman Correlation: 0.2942804773126847 Coefficient of Determination: 0.06608112336033933 RMSE: 0.21588500135382024 NRMSE: 0.19477350152366968 MAPE: 122.65180027927234 Predictor: RandomForests Pearson Correlation: 0.3697002386602205 Spearman Correlation: 0.3702285475555668 Coefficient of Determination: 0.13532228695214488 RMSE: 0.18947969027848924 NRMSE: 0.13293462022119973 MAPE: 428.8692666441503 Pearson Correlation: 0.33392383751857757 Spearman Correlation: 0.2896321859679133 Coefficient of Determination: 0.1080813307623334 RMSE: 0.21097476953916952 NRMSE: 0.190343443678822 MAPE: 147.6576392773054 Protein: PTEN x_train_column_count: 2 x_train columns: ['PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 0.41047879730320036 Spearman Correlation: 0.4294724284369952 Coefficient of Determination: 0.16849284303548206 RMSE: 0.5188792564179012 NRMSE: 0.08113192970336974 MAPE: 331.4472207113479 Pearson Correlation: 0.4107851156492474 Spearman Correlation: 0.4342123966633 Coefficient of Determination: 0.16313502873870145 RMSE: 0.660217650275519 NRMSE: 0.12771155413871849 MAPE: 278.94188736048403 Predictor: ElasticNet Pearson Correlation: 0.3968160834896989 Spearman Correlation: 0.42534942161118144 Coefficient of Determination: 0.15743963481236534 RMSE: 0.5223165968611428 NRMSE: 0.08166939205083931 MAPE: 366.8553172167167 Pearson Correlation: 0.4180732538072814 Spearman Correlation: 0.4282921233431839 Coefficient of Determination: 0.170510888939581 RMSE: 0.6573017374695886 NRMSE: 0.1271475041530464 MAPE: 263.15641688047606 Predictor: RandomForests Pearson Correlation: 0.4466690553755365 Spearman Correlation: 0.4428356386057776 Coefficient of Determination: 0.19585657736412887 RMSE: 0.5102700403029308 NRMSE: 0.07978579318316484 MAPE: 452.43953537742954 Pearson Correlation: 0.4051842265932541 Spearman Correlation: 0.42716816404129 Coefficient of Determination: 0.15737519783928322 RMSE: 0.6624857707957034 NRMSE: 0.1281502961149225 MAPE: 396.73535886051974 Protein: BRCA2 x_train_column_count: 2 x_train columns: ['BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.042581628930504656 Spearman Correlation: 0.042700362873653835 Coefficient of Determination: 0.0018131951223750997 RMSE: 0.2002863744007075 NRMSE: 0.12902971454386053 MAPE: 117.46994060512206 Pearson Correlation: -0.05644220399099406 Spearman Correlation: -0.03929974189204354 Coefficient of Determination: -0.10808195556882616 RMSE: 0.1748328480970483 NRMSE: 0.2286442792088515 MAPE: 113.30018821972736 Predictor: ElasticNet Pearson Correlation: 0.04257688357170663 Spearman Correlation: 0.04263289576165543 Coefficient of Determination: 0.0018127199234500013 RMSE: 0.20028642207507968 NRMSE: 0.1290297452569365 MAPE: 117.35171000745437 Pearson Correlation: -0.055947461482781444 Spearman Correlation: -0.039903240688786645 Coefficient of Determination: -0.10791142819447708 RMSE: 0.17481939469970864 NRMSE: 0.22862668501890882 MAPE: 113.18000815772851 Predictor: RandomForests Pearson Correlation: 0.28083441731695136 Spearman Correlation: 0.22517775526251882 Coefficient of Determination: 0.041887983610824686 RMSE: 0.19622468301996276 NRMSE: 0.12641306685132084 MAPE: 123.80869397941534 Pearson Correlation: -0.0826894351690544 Spearman Correlation: -0.0055284252872204115 Coefficient of Determination: -0.11650690740137781 RMSE: 0.17549623274850445 NRMSE: 0.22951184561368526 MAPE: 122.17219062749409 Protein: CDKN2A x_train_column_count: 2 x_train columns: ['CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 0.5624274536735128 Spearman Correlation: 0.5457610564847619 Coefficient of Determination: 0.31632464064567134 RMSE: 0.5619972943401821 NRMSE: 0.14310745698866392 MAPE: 132.77395440956855 Pearson Correlation: 0.31075863610910975 Spearman Correlation: 0.30899387772914877 Coefficient of Determination: -0.03833637671209056 RMSE: 0.6174551979095128 NRMSE: 0.15536981905576427 MAPE: 273.2245382084838 Predictor: ElasticNet Pearson Correlation: 0.5622615976105251 Spearman Correlation: 0.543492990453 Coefficient of Determination: 0.3161381036518295 RMSE: 0.5620739580187694 NRMSE: 0.14312697869134205 MAPE: 133.39986156125664 Pearson Correlation: 0.3125409359562636 Spearman Correlation: 0.30912355515654816 Coefficient of Determination: -0.034271537377496886 RMSE: 0.6162454178112082 NRMSE: 0.15506540293681795 MAPE: 231.46596213529503 Predictor: RandomForests Pearson Correlation: 0.6804985222571751 Spearman Correlation: 0.5578792484186119 Coefficient of Determination: 0.4625852388380224 RMSE: 0.4982692159571973 NRMSE: 0.12687968627159923 MAPE: 263.8935646704191 Pearson Correlation: 0.3800441671847586 Spearman Correlation: 0.31043525603050665 Coefficient of Determination: -0.060342568086227955 RMSE: 0.6239639730831126 NRMSE: 0.15700761759470386 MAPE: 482.2917517452506 Protein: TP53 x_train_column_count: 2 x_train columns: ['TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.49617263785200455 Spearman Correlation: 0.422330008616601 Coefficient of Determination: 0.24618728655301647 RMSE: 0.3679471476677106 NRMSE: 0.0935799861816706 MAPE: 859.2353578766179 Pearson Correlation: 0.4953512943674849 Spearman Correlation: 0.4048504345440717 Coefficient of Determination: 0.22896449037527766 RMSE: 0.46375757088630953 NRMSE: 0.12421523259309215 MAPE: 201.1391628651781 Predictor: ElasticNet Pearson Correlation: 0.4830502829342315 Spearman Correlation: 0.4028460021155618 Coefficient of Determination: 0.22797921543265087 RMSE: 0.3723644468340405 NRMSE: 0.09470343773596494 MAPE: 768.9786537581573 Pearson Correlation: 0.4836098042213028 Spearman Correlation: 0.40339904487587136 Coefficient of Determination: 0.20198485076325046 RMSE: 0.47180157971715325 NRMSE: 0.1263697816304147 MAPE: 181.76426181049433 Predictor: RandomForests Pearson Correlation: 0.5521256103058233 Spearman Correlation: 0.47180378890603203 Coefficient of Determination: 0.2972112301119625 RMSE: 0.3552762026792161 NRMSE: 0.09035738515201712 MAPE: 775.3845060972717 Pearson Correlation: 0.5465054322677453 Spearman Correlation: 0.44806802433589593 Coefficient of Determination: 0.27120395577791856 RMSE: 0.45087569635488056 NRMSE: 0.12076488451985552 MAPE: 196.2282167443031 Protein: CTNNB1 x_train_column_count: 2 x_train columns: ['CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.051839839414713325 Spearman Correlation: 0.07847807921027664 Coefficient of Determination: 0.002687368950543112 RMSE: 0.7549643112450443 NRMSE: 0.14849809426535096 MAPE: 681.6283540032657 Pearson Correlation: 0.16859534211479762 Spearman Correlation: 0.23237945610294397 Coefficient of Determination: 0.015679976667764772 RMSE: 0.6723239116067103 NRMSE: 0.21532348989290584 MAPE: 272.7498867093379 Predictor: ElasticNet Pearson Correlation: 0.0518271737217569 Spearman Correlation: 0.07808903558350536 Coefficient of Determination: 0.0026860559261494554 RMSE: 0.7549648082237248 NRMSE: 0.14849819201882866 MAPE: 681.5642415402232 Pearson Correlation: 0.16859534211479751 Spearman Correlation: 0.23237945610294397 Coefficient of Determination: 0.015684830383019266 RMSE: 0.6723222539787178 NRMSE: 0.21532295900855364 MAPE: 272.72565163939026 Predictor: RandomForests Pearson Correlation: 0.2709132651209278 Spearman Correlation: 0.26370850559812414 Coefficient of Determination: 0.053288494500083106 RMSE: 0.7355625165488577 NRMSE: 0.14468184825902003 MAPE: 720.5866044879414 Pearson Correlation: 0.21966619098758056 Spearman Correlation: 0.2606286481137723 Coefficient of Determination: 0.03927354356881829 RMSE: 0.6642174375171072 NRMSE: 0.212727249804511 MAPE: 272.48748832271815 Protein: CCNE1 x_train_column_count: 2 x_train columns: ['CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.7386144499663949 Spearman Correlation: 0.7133623941506215 Coefficient of Determination: 0.54555130569916 RMSE: 0.3025440331935519 NRMSE: 0.10776279009565516 MAPE: 69.0319524869495 Pearson Correlation: 0.7813741840172372 Spearman Correlation: 0.719053853539321 Coefficient of Determination: 0.25116304355432495 RMSE: 0.5608323339417696 NRMSE: 0.13534578611911324 MAPE: 91.42172628039428 Predictor: ElasticNet Pearson Correlation: 0.7385943192541282 Spearman Correlation: 0.7126097756485593 Coefficient of Determination: 0.5455215629505619 RMSE: 0.3025539334793307 NRMSE: 0.10776631646636889 MAPE: 69.04154671607486 Pearson Correlation: 0.7813741840172372 Spearman Correlation: 0.719053853539321 Coefficient of Determination: 0.25148739015219623 RMSE: 0.5607108630665741 NRMSE: 0.1353164715270348 MAPE: 91.41185328625822 Predictor: RandomForests Pearson Correlation: 0.8556441900853572 Spearman Correlation: 0.7114927920105991 Coefficient of Determination: 0.7307222498598404 RMSE: 0.23288761708519015 NRMSE: 0.08295195621912382 MAPE: 56.512948131727114 Pearson Correlation: 0.8005340807679645 Spearman Correlation: 0.7307358786224182 Coefficient of Determination: 0.6136504949478718 RMSE: 0.4028372194679773 NRMSE: 0.09721679162776681 MAPE: 78.43246041847577 Protein: CCND1 x_train_column_count: 2 x_train columns: ['CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.4170395088721106 Spearman Correlation: 0.4316396213226719 Coefficient of Determination: 0.17392195196029125 RMSE: 0.20688004904562254 NRMSE: 0.13030336657615044 MAPE: 582.8211463851483 Pearson Correlation: 0.358992718576449 Spearman Correlation: 0.2762503273108144 Coefficient of Determination: 0.12651562367455815 RMSE: 0.2579122947086627 NRMSE: 0.16477702476882655 MAPE: 243.26044499421084 Predictor: ElasticNet Pearson Correlation: 0.41451772860371755 Spearman Correlation: 0.42726285187649277 Coefficient of Determination: 0.17182494732119957 RMSE: 0.2071424658072243 NRMSE: 0.1304686497324551 MAPE: 584.9075646099564 Pearson Correlation: 0.358992718576449 Spearman Correlation: 0.2762503273108144 Coefficient of Determination: 0.12633810720855265 RMSE: 0.2579385008747042 NRMSE: 0.16479376756922617 MAPE: 243.89694748261402 Predictor: RandomForests Pearson Correlation: 0.491338635402475 Spearman Correlation: 0.4512173853537595 Coefficient of Determination: 0.23817352746790288 RMSE: 0.19867174193036233 NRMSE: 0.12513336562176405 MAPE: 544.3909708292624 Pearson Correlation: 0.39141166085500984 Spearman Correlation: 0.2942353603372814 Coefficient of Determination: 0.15022210570379357 RMSE: 0.25438833306784453 NRMSE: 0.16252560858399748 MAPE: 251.6905399030386 Protein: ERBB2 x_train_column_count: 2 x_train columns: ['ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.7777410249677731 Spearman Correlation: 0.6469409697107757 Coefficient of Determination: 0.6048811019179227 RMSE: 0.6461351361477838 NRMSE: 0.11007975469747752 MAPE: 308.27260346052265 Pearson Correlation: 0.6808501187711697 Spearman Correlation: 0.5812566241474333 Coefficient of Determination: 0.4627290572188175 RMSE: 0.6360282769523837 NRMSE: 0.14072978801911357 MAPE: 206.9199510265692 Predictor: ElasticNet Pearson Correlation: 0.7776877249625477 Spearman Correlation: 0.6442627066647334 Coefficient of Determination: 0.604798197557368 RMSE: 0.6462029190492757 NRMSE: 0.11009130263033473 MAPE: 306.01350741312586 Pearson Correlation: 0.6819514367848012 Spearman Correlation: 0.5872666741480568 Coefficient of Determination: 0.46429715110159864 RMSE: 0.6350994338309215 NRMSE: 0.14052426901890067 MAPE: 204.89019497785407 Predictor: RandomForests Pearson Correlation: 0.838022725420146 Spearman Correlation: 0.6476716327438983 Coefficient of Determination: 0.7007492231903293 RMSE: 0.5623116746672499 NRMSE: 0.09579904844664121 MAPE: 556.9708624977075 Pearson Correlation: 0.7751002688381805 Spearman Correlation: 0.5803322760177033 Coefficient of Determination: 0.5949869104508938 RMSE: 0.552222728245644 NRMSE: 0.12218668619219915 MAPE: 295.855146905497 Protein: ERBB3 x_train_column_count: 2 x_train columns: ['ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.3803758811682577 Spearman Correlation: 0.4068847131242151 Coefficient of Determination: 0.14468581097452848 RMSE: 0.43366315788138476 NRMSE: 0.11703323947606775 MAPE: 213.25911644947956 Pearson Correlation: 0.5205117505086533 Spearman Correlation: 0.5682040923203532 Coefficient of Determination: 0.23122433378792018 RMSE: 0.36559820177555424 NRMSE: 0.17688751997036745 MAPE: 191.64407708182964 Predictor: ElasticNet Pearson Correlation: 0.3773884363248901 Spearman Correlation: 0.41142820549776254 Coefficient of Determination: 0.1424220318453311 RMSE: 0.43423667162244534 NRMSE: 0.11718801437400528 MAPE: 211.5703984107923 Pearson Correlation: 0.5207896565156245 Spearman Correlation: 0.5619845633985462 Coefficient of Determination: 0.2314532053506414 RMSE: 0.3655437767566056 NRMSE: 0.1768611874923098 MAPE: 189.6681080447603 Predictor: RandomForests Pearson Correlation: 0.46250152633420993 Spearman Correlation: 0.42563618973560513 Coefficient of Determination: 0.2129052469927859 RMSE: 0.4160094520573886 NRMSE: 0.11226901096416611 MAPE: 251.67445603380173 Pearson Correlation: 0.545541337658826 Spearman Correlation: 0.5588239281487987 Coefficient of Determination: 0.2690442607444641 RMSE: 0.35649199069533327 NRMSE: 0.1724816583263984 MAPE: 218.38546188635024
Polynomial Features
ZScore
scenario = Scenario.selfmRNA_Polynomial
normalizeTechnique = NormalizeTechnique.ZScore
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.648331 | 0.348611 | 0.770359 | -0.860535 | -0.0703 | -0.190586 | 0.719543 | 0.931178 | -0.283665 | -0.568745 | ... | 0.238689 | -0.239582 | -0.271725 | -0.222943 | -0.211122 | 0.792968 | -0.619672 | -0.946953 | -0.457066 | 0.454464 |
| TCGA-A1-A0SH-01 | -0.757220 | -0.562180 | -0.708360 | -0.860535 | -0.0703 | -0.190586 | -0.527186 | -0.611509 | -0.283665 | -0.568745 | ... | 0.739490 | -0.107967 | -1.200905 | -0.903627 | 1.252346 | 0.854083 | 0.108510 | -0.031025 | 0.991113 | -0.083768 |
| TCGA-A1-A0SJ-01 | -0.405237 | 0.254851 | -0.925065 | -0.223237 | -0.0703 | -0.190586 | -0.525012 | -0.390046 | -0.283665 | 1.475888 | ... | 0.592975 | 5.821247 | -1.079296 | -0.618408 | 0.444358 | -0.369825 | -0.573411 | -0.555512 | -0.488416 | -0.083768 |
| TCGA-A1-A0SK-01 | 3.940101 | 14.857648 | -0.228301 | -0.311392 | -0.0703 | -0.004913 | -0.697917 | -0.754652 | -0.283665 | -0.568745 | ... | 0.051750 | -0.027856 | 2.390553 | 0.357970 | 1.337526 | -1.597758 | 1.043918 | 0.590450 | -0.467061 | -0.083768 |
| TCGA-A1-A0SQ-01 | -1.114818 | -1.129592 | -0.842620 | -0.860535 | -0.0703 | -0.190586 | -0.507239 | -0.137487 | -0.283665 | -0.568745 | ... | 1.412610 | -0.008283 | -0.929428 | -0.853107 | 0.062384 | -0.434733 | -1.040418 | -0.606257 | -0.580936 | -0.083768 |
5 rows × 20133 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 5 x_train columns: ['RB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.21241461696289263 Spearman Correlation: 0.26756438157698553 Coefficient of Determination: 0.045119969499492374 RMSE: 0.2189878439181805 NRMSE: 0.08293423363687956 MAPE: 194.96779593938268 Pearson Correlation: 0.22405078027856792 Spearman Correlation: 0.30928202126621795 Coefficient of Determination: 0.006072297756483436 RMSE: 0.27961341709339627 NRMSE: 0.138133224531499 MAPE: 125.99790539080892 Predictor: ElasticNet Pearson Correlation: 0.19767913702684284 Spearman Correlation: 0.25847504910702246 Coefficient of Determination: 0.03655753834015896 RMSE: 0.21996748721081513 NRMSE: 0.08330524037523769 MAPE: 161.63923945786794 Pearson Correlation: 0.2777436943379683 Spearman Correlation: 0.34967808018729885 Coefficient of Determination: 0.011431365231402979 RMSE: 0.2788585872947335 NRMSE: 0.13776032728234117 MAPE: 125.01942478189032 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.33842229446613853 Spearman Correlation: 0.33951015749172064 Coefficient of Determination: 0.09807561161455702 RMSE: 0.212828932873573 NRMSE: 0.08060175454405338 MAPE: 145.3752230663651 Pearson Correlation: 0.2706130630280089 Spearman Correlation: 0.33004424847246583 Coefficient of Determination: 0.02592568654048144 RMSE: 0.27680673635383185 NRMSE: 0.13674668212299582 MAPE: 107.54126252836822 Protein: CDH1 x_train_column_count: 5 x_train columns: ['CDH1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
-0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 0.5581310455518477 Spearman Correlation: 0.5396881917177833 Coefficient of Determination: 0.31151026400879844 RMSE: 0.9363192161612265 NRMSE: 0.15738308980236776 MAPE: 666.4963024330107 Pearson Correlation: 0.6424724028740378 Spearman Correlation: 0.6492732416349625 Coefficient of Determination: 0.40707201531229975 RMSE: 0.893456175464973 NRMSE: 0.14470800678063117 MAPE: 297.1536801786706 Predictor: ElasticNet Pearson Correlation: 0.5178594601931491 Spearman Correlation: 0.5627471043362654 Coefficient of Determination: 0.2670834607547917 RMSE: 0.9660563567869909 NRMSE: 0.16238151661321346 MAPE: 707.0214110688012 Pearson Correlation: 0.5725671437929908 Spearman Correlation: 0.6566481318895718 Coefficient of Determination: 0.3250938926527611 RMSE: 0.9532217864502712 NRMSE: 0.15438790231127453 MAPE: 367.5044283182842 Predictor: RandomForests Pearson Correlation: 0.7132134998444969 Spearman Correlation: 0.5781801023015845 Coefficient of Determination: 0.5084673634826771 RMSE: 0.7911364260120465 NRMSE: 0.13297974988856612 MAPE: 306.3488021625489 Pearson Correlation: 0.7364529516243186 Spearman Correlation: 0.6543510118962805 Coefficient of Determination: 0.5391808694107084 RMSE: 0.7876577143766689 NRMSE: 0.12757243276483898 MAPE: 153.68920103222936 Protein: CDH2
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CDH2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.17388495210951274 Spearman Correlation: 0.10927836285834956 Coefficient of Determination: 0.030235976570127554 RMSE: 0.3655396765051443 NRMSE: 0.13504145987991456 MAPE: 588.988655699678 Pearson Correlation: 0.08632633884127398 Spearman Correlation: 0.07541215491171593 Coefficient of Determination: 0.004884353051325951 RMSE: 0.3741977719600238 NRMSE: 0.19311439952522258 MAPE: 100.93432290740452 Predictor: ElasticNet Pearson Correlation: 0.14942922530493533 Spearman Correlation: 0.02102872635167209 Coefficient of Determination: 0.022243423318960898 RMSE: 0.3670429289325668 NRMSE: 0.13559680698835438 MAPE: 367.87090126873863 Pearson Correlation: 0.06801321309954192 Spearman Correlation: 0.11871524729294705 Coefficient of Determination: 0.003907475206151645 RMSE: 0.3743813967712493 NRMSE: 0.19320916383921624 MAPE: 102.72235582189779 Predictor: RandomForests Pearson Correlation: 0.19320420277460554 Spearman Correlation: 0.1288803543458318 Coefficient of Determination: 0.0365366777677103 RMSE: 0.36435025855834613 NRMSE: 0.13460205276143522 MAPE: 517.4227749514495 Pearson Correlation: 0.044230558158288136 Spearman Correlation: -0.05978684567685635 Coefficient of Determination: -0.006409334490806495 RMSE: 0.3763151890353155 NRMSE: 0.19420714715142465 MAPE: 98.36754929438122 Protein: CDH3 x_train_column_count: 5 x_train columns: ['CDH3', '2', '1/2', '3', '1/3']
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.3088687080325875 Spearman Correlation: 0.3091345243588214 Coefficient of Determination: 0.09539987880171963 RMSE: 0.1985904419321237 NRMSE: 0.13932651535901364 MAPE: 446.0422041985547 Pearson Correlation: 0.4387315267478092 Spearman Correlation: 0.44209833187006153 Coefficient of Determination: 0.1775577108111157 RMSE: 0.18553013437162413 NRMSE: 0.14200437376799574 MAPE: 381.4952850258653 Predictor: ElasticNet Pearson Correlation: 0.29494976504896575 Spearman Correlation: 0.3061115403229242 Coefficient of Determination: 0.08057837116327338 RMSE: 0.2002107439915379 NRMSE: 0.14046328225258034 MAPE: 325.19396115600404 Pearson Correlation: 0.4633919644050289 Spearman Correlation: 0.4640717978733782 Coefficient of Determination: 0.16648051894571692 RMSE: 0.18677537619512358 NRMSE: 0.14295747923484978 MAPE: 249.28864793929617 Predictor: RandomForests Pearson Correlation: 0.3496126567753676 Spearman Correlation: 0.33062402402081775 Coefficient of Determination: 0.12012814062298827 RMSE: 0.19585728749116452 NRMSE: 0.13740899666832557 MAPE: 381.17090132506877 Pearson Correlation: 0.445835386094499 Spearman Correlation: 0.4605862331967038 Coefficient of Determination: 0.17858820426947042 RMSE: 0.1854138663259394 NRMSE: 0.14191538245091073 MAPE: 326.55962107813144 Protein: PTEN x_train_column_count: 5 x_train columns: ['PTEN', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 0.41751768896669544 Spearman Correlation: 0.43041410153444526 Coefficient of Determination: 0.17432102060009014 RMSE: 0.5692574869664729 NRMSE: 0.0890090668386323 MAPE: 526.4702891978387 Pearson Correlation: 0.39418840041960795 Spearman Correlation: 0.40564335186811046 Coefficient of Determination: 0.14096036857269345 RMSE: 0.46033217189615866 NRMSE: 0.15171451186347593 MAPE: 194.6664754136317 Predictor: ElasticNet Pearson Correlation: 0.4062333354472458 Spearman Correlation: 0.4288996648292669 Coefficient of Determination: 0.1641881209589111 RMSE: 0.5727398570379184 NRMSE: 0.08955357001609231 MAPE: 389.23773415077005
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.3734797257905721 Spearman Correlation: 0.40280460442883625 Coefficient of Determination: 0.13445903293708716 RMSE: 0.462070818597817 NRMSE: 0.15228752837578835 MAPE: 163.6092818170967 Predictor: RandomForests Pearson Correlation: 0.4510661366641352 Spearman Correlation: 0.4465246887841456 Coefficient of Determination: 0.199567912918601 RMSE: 0.5604867911010524 NRMSE: 0.08763768135424163 MAPE: 529.5491842611985 Pearson Correlation: 0.3866330546263069 Spearman Correlation: 0.3981096259406254 Coefficient of Determination: 0.13840788698258943 RMSE: 0.4610155617120034 NRMSE: 0.15193974085821746 MAPE: 202.21690083920234 Protein: BRCA2 x_train_column_count: 5 x_train columns: ['BRCA2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.08082220797455905 Spearman Correlation: 0.031557483768169026 Coefficient of Determination: 0.006532229301882797 RMSE: 0.19696474846304904 NRMSE: 0.1274143508875636 MAPE: 131.92029545311112 Pearson Correlation: -0.06874772638365294 Spearman Correlation: 0.02043461666499503 Coefficient of Determination: -0.09906721639336635 RMSE: 0.19366918660990648 NRMSE: 0.1938242460067119 MAPE: 115.70524564281952 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: RandomForests Pearson Correlation: 0.3257942376102405 Spearman Correlation: 0.25500959044958793 Coefficient of Determination: 0.04912356112431371 RMSE: 0.19269642508331206 NRMSE: 0.12465321897410636 MAPE: 133.9139947559344 Pearson Correlation: -0.03975777992192093 Spearman Correlation: -0.01067431406904905 Coefficient of Determination: -0.021845741347306546 RMSE: 0.18674159822161593 NRMSE: 0.18689111111050435 MAPE: 115.13583396986726 Protein: CDKN2A
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CDKN2A', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 0.5577864708733808 Spearman Correlation: 0.4873857738146542 Coefficient of Determination: 0.3111257470893809 RMSE: 0.5334432630474121 NRMSE: 0.12059302883404815 MAPE: 169.3080797591097 Pearson Correlation: 0.622015408515405 Spearman Correlation: 0.4977611940298508 Coefficient of Determination: 0.3806347028115231 RMSE: 0.5877809219283335 NRMSE: 0.15873100781213437 MAPE: 225.33172668969704 Predictor: ElasticNet Pearson Correlation: 0.5523927858323199 Spearman Correlation: 0.4875157675526758 Coefficient of Determination: 0.30204754875754436 RMSE: 0.5369466987815397 NRMSE: 0.1213850341995116 MAPE: 159.38149075616772 Pearson Correlation: 0.4004498617408212 Spearman Correlation: 0.49710272168568925 Coefficient of Determination: 0.11689231785679055 RMSE: 0.7018573994690838 NRMSE: 0.1895375099835495 MAPE: 136.26808350415965 Predictor: RandomForests Pearson Correlation: 0.6030977868530905 Spearman Correlation: 0.5141947157079035 Coefficient of Determination: 0.36336053526383627 RMSE: 0.5128200970446883 NRMSE: 0.11593084594657811 MAPE: 222.40440960212115 Pearson Correlation: 0.6733267754331244 Spearman Correlation: 0.5183335573776425 Coefficient of Determination: 0.44130309960791325 RMSE: 0.5582518648592407 NRMSE: 0.15075664727497726 MAPE: 518.389779317185 Protein: TP53
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['TP53', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.35771481339104516 Spearman Correlation: 0.29836670326833126 Coefficient of Determination: 0.12795988771939026 RMSE: 0.42285689769899987 NRMSE: 0.1016238639026676 MAPE: 581.5773372147161 Pearson Correlation: 0.2851102166433944 Spearman Correlation: 0.24413715735050243 Coefficient of Determination: 0.06176900964966581 RMSE: 0.40743934487185746 NRMSE: 0.14651348299897785 MAPE: 780.0331962028185 Predictor: ElasticNet Pearson Correlation: 0.35581029514696483 Spearman Correlation: 0.2977431207885347 Coefficient of Determination: 0.1256352799981837 RMSE: 0.42342012993122147 NRMSE: 0.10175922372776292 MAPE: 558.9991922314906 Pearson Correlation: 0.30324553934006104 Spearman Correlation: 0.2420007804116672 Coefficient of Determination: 0.08321959056785444 RMSE: 0.402754813991281 NRMSE: 0.14482894530234133 MAPE: 687.0439145626301 Predictor: RandomForests Pearson Correlation: 0.45492238975734456 Spearman Correlation: 0.34634270161779623 Coefficient of Determination: 0.20619176236443626 RMSE: 0.40344374717794973 NRMSE: 0.09695836269597446 MAPE: 668.2271002590516 Pearson Correlation: 0.3281714473563291 Spearman Correlation: 0.28867684750577033 Coefficient of Determination: 0.08991864560113616 RMSE: 0.40128062042132523 NRMSE: 0.1442988314651103 MAPE: 1228.5562057380778 Protein: CTNNB1 x_train_column_count: 5 x_train columns: ['CTNNB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 0.16959320112037618 Spearman Correlation: 0.14849198255387172 Coefficient of Determination: 0.028761853866256293 RMSE: 0.7265556904199042 NRMSE: 0.14643281343489212 MAPE: 653.5696425124389 Pearson Correlation: -0.023875814070730694 Spearman Correlation: -0.02187103697200273 Coefficient of Determination: -0.05260026281856511 RMSE: 0.7704549514072453 NRMSE: 0.19115142941677302 MAPE: 390.1302793298882 Predictor: ElasticNet Pearson Correlation: 0.1413570091186645 Spearman Correlation: 0.1565417527584584 Coefficient of Determination: 0.018842000964715444 RMSE: 0.7302566445965175 NRMSE: 0.1471787178984053 MAPE: 618.8295371625946 Pearson Correlation: -0.04025151655275911 Spearman Correlation: -0.0542776314505902 Coefficient of Determination: -0.03708269077146209 RMSE: 0.764754790968012 NRMSE: 0.18973720810003772 MAPE: 321.8071931131136 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.3101062182161038 Spearman Correlation: 0.30214397355368927 Coefficient of Determination: 0.0810954979009082 RMSE: 0.7067099932976456 NRMSE: 0.1424330357130914 MAPE: 629.35485529497 Pearson Correlation: -0.061516937008809856 Spearman Correlation: -0.04363860716264333 Coefficient of Determination: -0.07644300833875395 RMSE: 0.7791319862948893 NRMSE: 0.19330421929610714 MAPE: 403.9329888673451 Protein: CCNE1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CCNE1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.8547285106431132 Spearman Correlation: 0.7125350581106897 Coefficient of Determination: 0.7305608269061945 RMSE: 0.2510617554563808 NRMSE: 0.0605887867018319 MAPE: 56.976131067826465 Pearson Correlation: 0.8550920843846759 Spearman Correlation: 0.7114769290800897 Coefficient of Determination: 0.7303130911775393 RMSE: 0.278892337626225 NRMSE: 0.09933832150533392 MAPE: 45.85204782815745 Predictor: ElasticNet Pearson Correlation: 0.8447645185949779 Spearman Correlation: 0.7131090453751777 Coefficient of Determination: 0.7070650590289367 RMSE: 0.26177958876844815 NRMSE: 0.06317532368859911 MAPE: 59.886799565803706 Pearson Correlation: 0.831447165150057 Spearman Correlation: 0.7106623744024974 Coefficient of Determination: 0.679135461137051 RMSE: 0.3042058147347579 NRMSE: 0.10835469803553263 MAPE: 46.07901720484598 Predictor: RandomForests Pearson Correlation: 0.8561762547193342 Spearman Correlation: 0.7204410839077513 Coefficient of Determination: 0.7277435645147519 RMSE: 0.252370896092054 NRMSE: 0.06090472188914593 MAPE: 54.30224746581206 Pearson Correlation: 0.835037312477197 Spearman Correlation: 0.7068181224371397 Coefficient of Determination: 0.6948292422374656 RMSE: 0.29667305776012354 NRMSE: 0.10567161451829868 MAPE: 44.958601320389704 Protein: CCND1 x_train_column_count: 5 x_train columns: ['CCND1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 0.4143515192284106 Spearman Correlation: 0.3731637827526827 Coefficient of Determination: 0.17168718148689177 RMSE: 0.21742147878176818 NRMSE: 0.13070750548975496 MAPE: 339.72378796791946
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.48393446431675774 Spearman Correlation: 0.47318310408740616 Coefficient of Determination: 0.21222814255204092 RMSE: 0.20853104823388258 NRMSE: 0.1485179250711374 MAPE: 1003.3071798035996 Predictor: ElasticNet Pearson Correlation: 0.41119060934881463 Spearman Correlation: 0.3731637827526827 Coefficient of Determination: 0.16457516152842244 RMSE: 0.2183528907019615 NRMSE: 0.13126744340092192 MAPE: 352.9063527839783 Pearson Correlation: 0.41256449065499573 Spearman Correlation: 0.47294898058725976 Coefficient of Determination: 0.1548357546206507 RMSE: 0.21599368473700684 NRMSE: 0.15383289038872916 MAPE: 1075.81464684523 Predictor: RandomForests Pearson Correlation: 0.4678214936064826 Spearman Correlation: 0.4000069413055528 Coefficient of Determination: 0.21262728070561177 RMSE: 0.21198026746323642 NRMSE: 0.12743640659799477 MAPE: 313.9035472003488 Pearson Correlation: 0.5051016495241929 Spearman Correlation: 0.4767461010643462 Coefficient of Determination: 0.2532383590907812 RMSE: 0.20303059905582352 NRMSE: 0.1446004494443504 MAPE: 1138.0410971577821 Protein: ERBB2 x_train_column_count: 5 x_train columns: ['ERBB2', '2', '1/2', '3', '1/3'] Predictor: Zero
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 0.8263256177810148 Spearman Correlation: 0.6134179112776257 Coefficient of Determination: 0.6828140266011757 RMSE: 0.5739705253682685 NRMSE: 0.0977853255478591 MAPE: 419.5616443183498 Pearson Correlation: 0.807493502145407 Spearman Correlation: 0.7157984586869575 Coefficient of Determination: 0.6431728532934027 RMSE: 0.5418207283127315 NRMSE: 0.10046740743792537 MAPE: 406.6713217954999 Predictor: ElasticNet Pearson Correlation: 0.8114038623743178 Spearman Correlation: 0.6137508967340191 Coefficient of Determination: 0.6555259665972593 RMSE: 0.5981510221941251 NRMSE: 0.10190487115084673 MAPE: 298.8779846228566 Pearson Correlation: 0.7968786088704526 Spearman Correlation: 0.7166081357916302 Coefficient of Determination: 0.6215311152450581 RMSE: 0.5580097178480088 NRMSE: 0.1034692597530148 MAPE: 266.44860405865745 Predictor: RandomForests Pearson Correlation: 0.8350979344896089 Spearman Correlation: 0.6216199006687065 Coefficient of Determination: 0.6966218612449863 RMSE: 0.5613383909851526 NRMSE: 0.09563323355284811 MAPE: 467.4143032542056 Pearson Correlation: 0.8038962179747616 Spearman Correlation: 0.712575091635544 Coefficient of Determination: 0.6361705769291585 RMSE: 0.5471111692714964 NRMSE: 0.10144839037112857 MAPE: 341.97895454914 Protein: ERBB3 x_train_column_count: 5 x_train columns: ['ERBB3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.40866244222384757 Spearman Correlation: 0.44253232456124236 Coefficient of Determination: 0.16700499168435956 RMSE: 0.4190487580394049 NRMSE: 0.11308923241570028 MAPE: 207.58894612158164 Pearson Correlation: 0.44368462137406267 Spearman Correlation: 0.47815149516118755 Coefficient of Determination: 0.1922949344190643 RMSE: 0.41837323051581793 NRMSE: 0.16787575056008358 MAPE: 200.72313509657357 Predictor: ElasticNet Pearson Correlation: 0.39802500182897144 Spearman Correlation: 0.4461608353851102 Coefficient of Determination: 0.1573358042171188 RMSE: 0.421473844910519 NRMSE: 0.1137436937582868 MAPE: 196.57608854567314 Pearson Correlation: 0.4269762011583946 Spearman Correlation: 0.47324952839944506 Coefficient of Determination: 0.17530528322054384 RMSE: 0.42275046252890736 NRMSE: 0.169632151438474 MAPE: 193.71330295840988 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.4888583547909291 Spearman Correlation: 0.46249054756555785 Coefficient of Determination: 0.2374084059193693 RMSE: 0.40094921293402225 NRMSE: 0.10820468467806303 MAPE: 242.40227594442695 Pearson Correlation: 0.4306135180238071 Spearman Correlation: 0.47175791537273415 Coefficient of Determination: 0.17674257303902818 RMSE: 0.4223819140865897 NRMSE: 0.16948426830002475 MAPE: 270.9861842046686 Fold: 2 Protein: RB1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['RB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.2598323953125551 Spearman Correlation: 0.3189673530129254 Coefficient of Determination: 0.06751287365386005 RMSE: 0.2269683515194535 NRMSE: 0.08300480965456901 MAPE: 238.27428959247032 Pearson Correlation: 0.05538898193197807 Spearman Correlation: 0.09247390498487953 Coefficient of Determination: -0.052314708067632276 RMSE: 0.25122841859474176 NRMSE: 0.14393579688255076 MAPE: 405.78231672616465 Predictor: ElasticNet Pearson Correlation: 0.25383196312848977 Spearman Correlation: 0.31598667996232 Coefficient of Determination: 0.061501442148336416 RMSE: 0.22769877060802687 NRMSE: 0.0832719319075581 MAPE: 174.28149382288694 Pearson Correlation: 0.06127142222451947 Spearman Correlation: 0.10746268656716418 Coefficient of Determination: -0.0298652466529139 RMSE: 0.2485341924073405 NRMSE: 0.14239219924564891 MAPE: 277.44781745385467 Predictor: RandomForests Pearson Correlation: 0.35614812748472296 Spearman Correlation: 0.4067656823580468 Coefficient of Determination: 0.11704931686327302 RMSE: 0.22085747588364613 NRMSE: 0.08076999556891681 MAPE: 212.91843709848632 Pearson Correlation: 0.11264007386989909 Spearman Correlation: 0.13200550644686648 Coefficient of Determination: -0.018195038279240627 RMSE: 0.24712201274812684 NRMSE: 0.14158312196956999 MAPE: 371.18275614626657 Protein: CDH1 x_train_column_count: 5 x_train columns: ['CDH1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.5695022358071042 Spearman Correlation: 0.5259853408912324 Coefficient of Determination: 0.3243327965892908 RMSE: 0.9211195581954971 NRMSE: 0.14776924010515713 MAPE: 600.4754887554699 Pearson Correlation: 0.5893958743305546 Spearman Correlation: 0.6115208272363672 Coefficient of Determination: 0.30220817106266507 RMSE: 0.9611580983861172 NRMSE: 0.17069048097782227 MAPE: 356.7792234266844 Predictor: ElasticNet Pearson Correlation: 0.5128753468212099 Spearman Correlation: 0.5458305603919511 Coefficient of Determination: 0.261767260696701 RMSE: 0.9628225097462307 NRMSE: 0.1544593743075689 MAPE: 667.3329266647453 Pearson Correlation: 0.5939324095086524 Spearman Correlation: 0.6867525119500537 Coefficient of Determination: 0.28602694728138434 RMSE: 0.9722384668051224 NRMSE: 0.1726582253250084 MAPE: 273.63141438556266 Predictor: RandomForests Pearson Correlation: 0.7350620519654282 Spearman Correlation: 0.5614465463510813 Coefficient of Determination: 0.5400871009269116 RMSE: 0.7599541298952075 NRMSE: 0.12191451510310539 MAPE: 218.3262024908791 Pearson Correlation: 0.6514030748046646 Spearman Correlation: 0.6950490242779388 Coefficient of Determination: 0.383884939942122 RMSE: 0.903156063581964 NRMSE: 0.16038999530846457 MAPE: 213.0898236841879 Protein: CDH2 x_train_column_count: 5 x_train columns: ['CDH2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.16735398787664432 Spearman Correlation: 0.09682518864106565 Coefficient of Determination: 0.028007357258216126 RMSE: 0.3629069490264684 NRMSE: 0.13149755381783768 MAPE: 539.8526502906614 Pearson Correlation: 0.1310757130795184 Spearman Correlation: 0.1748512340259487 Coefficient of Determination: 0.014081804040607104 RMSE: 0.3843453195770122 NRMSE: 0.2024820324718082 MAPE: 125.14554642242986 Predictor: ElasticNet Pearson Correlation: 0.14910110765773749 Spearman Correlation: 0.03346561956159758 Coefficient of Determination: 0.02213046571311017 RMSE: 0.3640024052054195 NRMSE: 0.13189448699377473 MAPE: 375.30547845533846 Pearson Correlation: 0.0817405340192824 Spearman Correlation: 0.063681592039801 Coefficient of Determination: 0.006034829859228097 RMSE: 0.38591062777268353 NRMSE: 0.2033066731497619 MAPE: 128.3877796590135 Predictor: RandomForests Pearson Correlation: 0.19454388271802053 Spearman Correlation: 0.14521057380373123 Coefficient of Determination: 0.03651527365429952 RMSE: 0.36131518380565425 NRMSE: 0.1309207854937511 MAPE: 424.33550523362396 Pearson Correlation: 0.1111368680265401 Spearman Correlation: 0.0855059428777579 Coefficient of Determination: 0.008862541012281122 RMSE: 0.38536130218298686 NRMSE: 0.20301727568288766 MAPE: 125.13506014316602 Protein: CDH3 x_train_column_count: 5 x_train columns: ['CDH3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.38747302773821746 Spearman Correlation: 0.355451706937927 Coefficient of Determination: 0.1501353472246214
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
RMSE: 0.1914808747938769 NRMSE: 0.14410818962007096 MAPE: 437.14707838462584 Pearson Correlation: 0.15022772759470146 Spearman Correlation: 0.25484342990927716 Coefficient of Determination: -0.18818620560402088 RMSE: 0.21574879714834316 NRMSE: 0.1775271925848294 MAPE: 841.3971854787377 Predictor: ElasticNet Pearson Correlation: 0.37901080275388094 Spearman Correlation: 0.3550272027884919 Coefficient of Determination: 0.13755345500581762 RMSE: 0.1928930645765743 NRMSE: 0.1451710013144689 MAPE: 327.6421693487065 Pearson Correlation: 0.13390632684033182 Spearman Correlation: 0.25419471271095506 Coefficient of Determination: -0.16003873841979033 RMSE: 0.2131779964714093 NRMSE: 0.1754118295658762 MAPE: 717.2858810668922 Predictor: RandomForests Pearson Correlation: 0.4204718415225781 Spearman Correlation: 0.381566465141858 Coefficient of Determination: 0.17586554340406868 RMSE: 0.18855999399025514 NRMSE: 0.14190993955901884 MAPE: 407.9762976268253 Pearson Correlation: 0.1528224579371404 Spearman Correlation: 0.25482125674289846 Coefficient of Determination: -0.20420158161696267 RMSE: 0.2171979524042062 NRMSE: 0.1787196185338651 MAPE: 749.9943127972166 Protein: PTEN
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['PTEN', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.4229417024694397 Spearman Correlation: 0.45067553346639316 Coefficient of Determination: 0.1788796836877481 RMSE: 0.5652150194246438 NRMSE: 0.08837698685398229 MAPE: 383.6024063237823 Pearson Correlation: 0.38663584736252066 Spearman Correlation: 0.3174665886255 Coefficient of Determination: 0.10926111935294935 RMSE: 0.48287124856536207 NRMSE: 0.16195037850998192 MAPE: 820.594070990473 Predictor: ElasticNet Pearson Correlation: 0.4153251145207706 Spearman Correlation: 0.4509122731754614 Coefficient of Determination: 0.17159402867249818 RMSE: 0.5677170080945207 NRMSE: 0.08876819765374415 MAPE: 308.37911109351467 Pearson Correlation: 0.3379254310687506 Spearman Correlation: 0.32171495463857186 Coefficient of Determination: 0.08693655055562421 RMSE: 0.48888489745150876 NRMSE: 0.16396729858180467 MAPE: 642.8417716783322 Predictor: RandomForests Pearson Correlation: 0.46375888053940667 Spearman Correlation: 0.4716693636386108 Coefficient of Determination: 0.21156547931044067 RMSE: 0.5538512121430947 NRMSE: 0.0866001426226401 MAPE: 387.8130772804039 Pearson Correlation: 0.3283337114702817 Spearman Correlation: 0.31888806115781315 Coefficient of Determination: 0.06748232850836522 RMSE: 0.49406566940135677 NRMSE: 0.16570487972945963 MAPE: 807.3513768694605 Protein: BRCA2 x_train_column_count: 5 x_train columns: ['BRCA2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.050638957076550396 Spearman Correlation: 0.07604684486387565 Coefficient of Determination: 0.0025643039738006967 RMSE: 0.1950737991249784 NRMSE: 0.1256716373812069 MAPE: 111.07939060000656 Pearson Correlation: -0.09719737768236264 Spearman Correlation: -0.06457906545702859 Coefficient of Determination: -0.031121948030188085 RMSE: 0.196170911774724 NRMSE: 0.13278746913331754 MAPE: 116.27680515360066 Predictor: ElasticNet Pearson Correlation: 0.017355238194719895 Spearman Correlation: 0.057472501576392276 Coefficient of Determination: 0.00029131650622482574 RMSE: 0.19529594275852238 NRMSE: 0.1258147481130761 MAPE: 125.4219372566561 Pearson Correlation: 0.0646118344312569 Spearman Correlation: -0.13059701492537315 Coefficient of Determination: -0.015652991595032306 RMSE: 0.19469386697137347 NRMSE: 0.13178766218202667 MAPE: 119.82381307271946 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.3065859879492729 Spearman Correlation: 0.2519146540417206 Coefficient of Determination: 0.04415935545666705 RMSE: 0.19096300303904637 NRMSE: 0.12302335515480521 MAPE: 126.69248816875668 Pearson Correlation: 0.07896059153515289 Spearman Correlation: 0.05877387777856347 Coefficient of Determination: -0.011046221373264498 RMSE: 0.19425182166951882 NRMSE: 0.13148844311664884 MAPE: 123.9361936403578 Protein: CDKN2A x_train_column_count: 5 x_train columns: ['CDKN2A', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.5796885433309603 Spearman Correlation: 0.4767699838536543 Coefficient of Determination: 0.336038807269171 RMSE: 0.5405188081335524 NRMSE: 0.12219256428926241 MAPE: 176.35423731859586 Pearson Correlation: 0.6608153795661388 Spearman Correlation: 0.574641498390401 Coefficient of Determination: 0.41950595356735776 RMSE: 0.5130891551092902 NRMSE: 0.13861280395215317 MAPE: 167.6609604065879 Predictor: ElasticNet Pearson Correlation: 0.5625396584454827 Spearman Correlation: 0.4759909513511134 Coefficient of Determination: 0.3137491268009819 RMSE: 0.5495167277852826 NRMSE: 0.12422668199056912 MAPE: 154.40852631276215 Pearson Correlation: 0.6488989479998403 Spearman Correlation: 0.5756072578285046 Coefficient of Determination: 0.3878033965221095 RMSE: 0.5269136000609745 NRMSE: 0.1423475254108965 MAPE: 166.7951535688582 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.6040027516191304 Spearman Correlation: 0.4861296560239233 Coefficient of Determination: 0.36433447381499207 RMSE: 0.528875917565927 NRMSE: 0.11956051035739278 MAPE: 257.31980271784846 Pearson Correlation: 0.6767232145862041 Spearman Correlation: 0.5695490455952427 Coefficient of Determination: 0.44292371931817465 RMSE: 0.502633330458527 NRMSE: 0.13578812687987005 MAPE: 209.44197109607816 Protein: TP53 x_train_column_count: 5
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train columns: ['TP53', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 0.33518732000784224 Spearman Correlation: 0.28721591403876384 Coefficient of Determination: 0.11235053949403961 RMSE: 0.428982605048243 NRMSE: 0.1149009254180375 MAPE: 383.87110282623973 Pearson Correlation: 0.3842070536777974 Spearman Correlation: 0.31097941664227885 Coefficient of Determination: 0.14415312904808308 RMSE: 0.3787288182444394 NRMSE: 0.12472544648260805 MAPE: 1642.877863167502 Predictor: ElasticNet Pearson Correlation: 0.3320155236955876 Spearman Correlation: 0.28717437803663004 Coefficient of Determination: 0.10936381968773512 RMSE: 0.42970370889428455 NRMSE: 0.11509406961143286 MAPE: 361.1622281830914 Pearson Correlation: 0.395296674568719 Spearman Correlation: 0.3101990049751244 Coefficient of Determination: 0.15438146804476915 RMSE: 0.37645889676129146 NRMSE: 0.12397790112342877 MAPE: 1419.0421453959116 Predictor: RandomForests Pearson Correlation: 0.4183776808455724 Spearman Correlation: 0.3552487263967929 Coefficient of Determination: 0.17437283973006568 RMSE: 0.41372419643944786 NRMSE: 0.11081403413404256 MAPE: 505.5579933077408 Pearson Correlation: 0.46793918082121677 Spearman Correlation: 0.28068144997753247 Coefficient of Determination: 0.21780722524703144 RMSE: 0.36206556235238085 NRMSE: 0.11923779428696882 MAPE: 1845.1105999300512 Protein: CTNNB1 x_train_column_count: 5 x_train columns: ['CTNNB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.16994364076043736 Spearman Correlation: 0.1414238158495077 Coefficient of Determination: 0.028880841034912397 RMSE: 0.7144378184279204 NRMSE: 0.14052671487567278 MAPE: 637.8648980039841 Pearson Correlation: -0.0335235067758794 Spearman Correlation: 0.10111696419861478 Coefficient of Determination: -18.115964548260088 RMSE: 3.3514260706299788 NRMSE: 0.8340822952713918 MAPE: 681.3480505327781 Predictor: ElasticNet Pearson Correlation: 0.15225207411456204 Spearman Correlation: 0.12529285158982464 Coefficient of Determination: 0.02221853053450984 RMSE: 0.7168843106118387 NRMSE: 0.14100792891656938 MAPE: 620.5293281416043 Pearson Correlation: -0.032674687371663284 Spearman Correlation: 0.10963320651643745 Coefficient of Determination: -4.41283978218028 RMSE: 1.783380943612442 NRMSE: 0.4438368740480431 MAPE: 540.7318453886394 Predictor: RandomForests Pearson Correlation: 0.2833594396665953 Spearman Correlation: 0.2903725679798915 Coefficient of Determination: 0.06864142943631013 RMSE: 0.6996593338034754 NRMSE: 0.13761985322649006 MAPE: 632.7142013413808 Pearson Correlation: 0.07107036893322828 Spearman Correlation: 0.14292842153443197 Coefficient of Determination: -0.12867971007949164 RMSE: 0.8143608639845592 NRMSE: 0.2026731201275626 MAPE: 489.20545811864076 Protein: CCNE1 x_train_column_count: 5 x_train columns: ['CCNE1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.857171724463809 Spearman Correlation: 0.7054402534347067 Coefficient of Determination: 0.73474336522026 RMSE: 0.264106144728317 NRMSE: 0.06373679193192486 MAPE: 59.575177615509375 Pearson Correlation: 0.8457279107489735 Spearman Correlation: 0.7523900107306605 Coefficient of Determination: 0.7100275765785553 RMSE: 0.22523636923524026 NRMSE: 0.12241173551771493 MAPE: 39.95367761275025 Predictor: ElasticNet Pearson Correlation: 0.8444164841805344 Spearman Correlation: 0.7061567494715154 Coefficient of Determination: 0.70746817990644 RMSE: 0.27735240398583977 NRMSE: 0.06693351448846195 MAPE: 62.04168852776856 Pearson Correlation: 0.8355358321266871 Spearman Correlation: 0.7531411569602966 Coefficient of Determination: 0.6842090926905503 RMSE: 0.23504985057105332 NRMSE: 0.12774517827328047 MAPE: 36.282381815650545 Predictor: RandomForests Pearson Correlation: 0.8575095771109752 Spearman Correlation: 0.710170393324273 Coefficient of Determination: 0.731498626310561 RMSE: 0.26571656764063023 NRMSE: 0.06412543563497122 MAPE: 67.92450709705875 Pearson Correlation: 0.8348268771767936 Spearman Correlation: 0.7371039696223399 Coefficient of Determination: 0.6935861385737008 RMSE: 0.23153378573015587 NRMSE: 0.12583426308303627 MAPE: 40.578139881621546 Protein: CCND1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CCND1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.4664981550726557 Spearman Correlation: 0.39453235101463213 Coefficient of Determination: 0.2176205286861913 RMSE: 0.21117436701670733 NRMSE: 0.12695192255516186 MAPE: 489.0096006815543 Pearson Correlation: 0.30629775976981805 Spearman Correlation: 0.3886206223783046 Coefficient of Determination: 0.0748075266159478 RMSE: 0.22645251465462113 NRMSE: 0.17519690741986535 MAPE: 316.4996654640335 Predictor: ElasticNet Pearson Correlation: 0.4578576311230757 Spearman Correlation: 0.3945270040292828 Coefficient of Determination: 0.20514694146213197 RMSE: 0.21285110182754316 NRMSE: 0.12795992703438888 MAPE: 518.7269123824633 Pearson Correlation: 0.30483876168924673 Spearman Correlation: 0.3886206223783046 Coefficient of Determination: 0.08946189533885929 RMSE: 0.22465193554304808 NRMSE: 0.1738038741281241 MAPE: 331.45346444245945 Predictor: RandomForests Pearson Correlation: 0.5008503416524863 Spearman Correlation: 0.40965289362051355 Coefficient of Determination: 0.24682640518724241 RMSE: 0.20719535774921233 NRMSE: 0.12455985725145323 MAPE: 491.2435425427666 Pearson Correlation: 0.3223551237305036 Spearman Correlation: 0.3839087800361473 Coefficient of Determination: 0.09358158362656677 RMSE: 0.22414314565335144 NRMSE: 0.1734102445173543 MAPE: 339.9207693327665 Protein: ERBB2
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['ERBB2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.8285719085064946 Spearman Correlation: 0.6625059628091206 Coefficient of Determination: 0.6865314075660957 RMSE: 0.550369539267918 NRMSE: 0.09876882782117222 MAPE: 264.57554608850523 Pearson Correlation: 0.812084046919188 Spearman Correlation: 0.5156960296556434 Coefficient of Determination: 0.6416280643994201 RMSE: 0.6328850073537912 NRMSE: 0.10782237718346613 MAPE: 1214.7698222970423 Predictor: ElasticNet Pearson Correlation: 0.8104714851832157 Spearman Correlation: 0.6630955260861322 Coefficient of Determination: 0.6527082016235801 RMSE: 0.5793014774559061 NRMSE: 0.10396092770595734 MAPE: 197.2571068809128 Pearson Correlation: 0.8263143594592769 Spearman Correlation: 0.5166032582187103 Coefficient of Determination: 0.6587246883291045 RMSE: 0.6176042095016806 NRMSE: 0.10521904177414189 MAPE: 775.2999257226506 Predictor: RandomForests Pearson Correlation: 0.8389314460905711 Spearman Correlation: 0.6674378433011975 Coefficient of Determination: 0.702290141087411 RMSE: 0.536357034617029 NRMSE: 0.09625415620426556 MAPE: 280.29274794216474 Pearson Correlation: 0.8162338272902081 Spearman Correlation: 0.5012271693086182 Coefficient of Determination: 0.6429515792289362 RMSE: 0.6317152624425456 NRMSE: 0.10762309188587928 MAPE: 1420.7198124436957 Protein: ERBB3
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['ERBB3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.4218943525227338 Spearman Correlation: 0.4558381061160308 Coefficient of Determination: 0.1779948446905768 RMSE: 0.4035776618062413 NRMSE: 0.10891402758792845 MAPE: 184.80790803380515 Pearson Correlation: 0.39785912027431614 Spearman Correlation: 0.4446297922153936 Coefficient of Determination: 0.15565610009516417 RMSE: 0.47577450975138863 NRMSE: 0.17558911486659926 MAPE: 305.75054206035594 Predictor: ElasticNet Pearson Correlation: 0.4138063728898162 Spearman Correlation: 0.4574811032948563 Coefficient of Determination: 0.1701360542472552 RMSE: 0.40550227728223837 NRMSE: 0.10943342606531381 MAPE: 179.7341497868448 Pearson Correlation: 0.37141879389325877 Spearman Correlation: 0.4416544727343674 Coefficient of Determination: 0.13580787086501922 RMSE: 0.4813341092946887 NRMSE: 0.17764093803663605 MAPE: 293.8752934763792 Predictor: RandomForests Pearson Correlation: 0.4937926972662044 Spearman Correlation: 0.47011878226411286 Coefficient of Determination: 0.24235048330361064 RMSE: 0.38745745765908807 NRMSE: 0.10456364716462097 MAPE: 216.39720242867085 Pearson Correlation: 0.43320350506909144 Spearman Correlation: 0.44593650227107995 Coefficient of Determination: 0.18582907647625257 RMSE: 0.46719617614868336 NRMSE: 0.1724231991366529 MAPE: 360.2215328744491 Fold: 3 Protein: RB1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['RB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.2213227533044884 Spearman Correlation: 0.2775496872489369 Coefficient of Determination: 0.04898376113027947 RMSE: 0.23461488071433306 NRMSE: 0.08580122905000478 MAPE: 281.75650835681745 Pearson Correlation: 0.06567020333407503 Spearman Correlation: 0.23729722315739596 Coefficient of Determination: -0.35238711569595416 RMSE: 0.2577791441302375 NRMSE: 0.1808798743493534 MAPE: 338.53969259384303 Predictor: ElasticNet Pearson Correlation: 0.21544695976996917 Spearman Correlation: 0.28181864803860485 Coefficient of Determination: 0.04370008572606787 RMSE: 0.23526571705218155 NRMSE: 0.08603924702025365 MAPE: 177.45884698658026 Pearson Correlation: 0.2098202898445137 Spearman Correlation: 0.26769161710245765 Coefficient of Determination: 0.017784299062279407 RMSE: 0.21968515010116854 NRMSE: 0.15414987306592232 MAPE: 191.65655179247975 Predictor: RandomForests Pearson Correlation: 0.31519058498597524 Spearman Correlation: 0.3526231391855951 Coefficient of Determination: 0.09189358699431704 RMSE: 0.22926088220034951 NRMSE: 0.08384321320960705 MAPE: 273.6641654193331 Pearson Correlation: 0.22995631815540388 Spearman Correlation: 0.2856093777911901 Coefficient of Determination: 0.02524645102033829 RMSE: 0.21884905602859636 NRMSE: 0.1535631980216655 MAPE: 235.89119739206487 Protein: CDH1 x_train_column_count: 5 x_train columns: ['CDH1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.5838412253537514 Spearman Correlation: 0.5784326278159665 Coefficient of Determination: 0.3408705764225701 RMSE: 0.9537080069771786 NRMSE: 0.15185949603152424 MAPE: 685.9323449815734 Pearson Correlation: 0.5312260466011908 Spearman Correlation: 0.4540031671217846 Coefficient of Determination: 0.24841683658183822 RMSE: 0.8162576026126427 NRMSE: 0.16047214300567034 MAPE: 381.12226455176886 Predictor: ElasticNet Pearson Correlation: 0.5369435489357715 Spearman Correlation: 0.6044531987710737 Coefficient of Determination: 0.2872083861007697 RMSE: 0.9917709200293938 NRMSE: 0.15792027642899809 MAPE: 753.6776935602629 Pearson Correlation: 0.4955246487361757 Spearman Correlation: 0.46526016533872 Coefficient of Determination: 0.21787611693607178 RMSE: 0.8326768523841083 NRMSE: 0.16370008500454297 MAPE: 364.2171074836373 Predictor: RandomForests Pearson Correlation: 0.720658592011157 Spearman Correlation: 0.6176291946545054 Coefficient of Determination: 0.5189174241027371 RMSE: 0.8147791240760056 NRMSE: 0.12973776696219955 MAPE: 282.7560913470706 Pearson Correlation: 0.7353301371123111 Spearman Correlation: 0.46500928923410684 Coefficient of Determination: 0.538426650574287 RMSE: 0.63967456230514 NRMSE: 0.1257568046052648 MAPE: 186.00534358064274 Protein: CDH2
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CDH2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.17594103762919658 Spearman Correlation: 0.1631954178776198 Coefficient of Determination: 0.030955248722038253 RMSE: 0.37529092386500934 NRMSE: 0.1359848263877851 MAPE: 326.95301372360143 Pearson Correlation: 0.07715578426868139 Spearman Correlation: -0.09566453447050462 Coefficient of Determination: -0.008739079523632842 RMSE: 0.3334258759522768 NRMSE: 0.17568332874168907 MAPE: 2318.5521669087243 Predictor: ElasticNet Pearson Correlation: 0.13892927783554868 Spearman Correlation: -0.004337622510016807 Coefficient of Determination: 0.01922370495525405 RMSE: 0.3775557814588985 NRMSE: 0.13680548643340043 MAPE: 246.88341205169561 Pearson Correlation: 0.12852535504861023 Spearman Correlation: 0.23133206149702618 Coefficient of Determination: 0.011545014538357767 RMSE: 0.3300565272291346 NRMSE: 0.17390800642250018 MAPE: 491.43410474561904 Predictor: RandomForests Pearson Correlation: 0.23483072397134555 Spearman Correlation: 0.21186586151500822 Coefficient of Determination: 0.04965473887600713 RMSE: 0.371652322736569 NRMSE: 0.13466639710724293 MAPE: 387.7809450415836 Pearson Correlation: -0.02543600523233715 Spearman Correlation: -0.1851350763201282 Coefficient of Determination: -0.04053330672582822 RMSE: 0.33863970008507494 NRMSE: 0.17843051198446422 MAPE: 642.2830860604364 Protein: CDH3 x_train_column_count: 5 x_train columns: ['CDH3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.3493987257947599 Spearman Correlation: 0.34033825023776276 Coefficient of Determination: 0.12207946958700178 RMSE: 0.19911703244066165 NRMSE: 0.13969595922480052 MAPE: 524.0110399552307 Pearson Correlation: 0.24678670309403483 Spearman Correlation: 0.2808788139502986 Coefficient of Determination: 0.037854177862703065 RMSE: 0.18472937815958862 NRMSE: 0.16068035015229468 MAPE: 196.12658689628455 Predictor: ElasticNet Pearson Correlation: 0.3395284365648528 Spearman Correlation: 0.3386347347546788 Coefficient of Determination: 0.1097435065684057 RMSE: 0.20051108337015647 NRMSE: 0.14067399349648965 MAPE: 406.86150827876304 Pearson Correlation: 0.2743564970814464 Spearman Correlation: 0.31279442387062184 Coefficient of Determination: 0.07173955257326159 RMSE: 0.18144727154870177 NRMSE: 0.15782552519305695 MAPE: 158.32991159622193 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.38429063561532717 Spearman Correlation: 0.366929487494884 Coefficient of Determination: 0.14614884835263475 RMSE: 0.19636853167347101 NRMSE: 0.13776767390236222 MAPE: 480.79342950124743 Pearson Correlation: 0.27872981926205087 Spearman Correlation: 0.308165676925972 Coefficient of Determination: 0.06525422500092604 RMSE: 0.18208001250055814 NRMSE: 0.15837589264794083 MAPE: 188.02770178028533 Protein: PTEN
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['PTEN', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 0.41341544219278353 Spearman Correlation: 0.4172067470649016 Coefficient of Determination: 0.17091232784345445 RMSE: 0.5729992317526327 NRMSE: 0.08959412583107383 MAPE: 555.663864204676 Pearson Correlation: 0.36572366461671346 Spearman Correlation: 0.36706941483060884 Coefficient of Determination: 0.12267557165276843 RMSE: 0.4411260144427458 NRMSE: 0.10546693789574567 MAPE: 132.5430532823572 Predictor: ElasticNet Pearson Correlation: 0.3946134892080878 Spearman Correlation: 0.4168387026449609 Coefficient of Determination: 0.15490531672465635 RMSE: 0.5785041724163967 NRMSE: 0.09045487802617413 MAPE: 391.8968184936985 Pearson Correlation: 0.40670013456279236 Spearman Correlation: 0.39053105400316723 Coefficient of Determination: 0.15527590044003758 RMSE: 0.43285257091699825 NRMSE: 0.10348887555993838 MAPE: 115.31261526478814 Predictor: RandomForests Pearson Correlation: 0.44865530088521594 Spearman Correlation: 0.44022349775190645 Coefficient of Determination: 0.19702940116125134 RMSE: 0.5639019971603931 NRMSE: 0.08817168277075961 MAPE: 546.1944791460286 Pearson Correlation: 0.3687177757531359 Spearman Correlation: 0.405227077725146 Coefficient of Determination: 0.1312647338902646 RMSE: 0.43896135222360844 NRMSE: 0.10494939803557798 MAPE: 126.18039299878608 Protein: BRCA2 x_train_column_count: 5 x_train columns: ['BRCA2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.07156884363994682 Spearman Correlation: 0.054700180184567855 Coefficient of Determination: 0.005122099379959 RMSE: 0.18956279611082358 NRMSE: 0.12776183923572074 MAPE: 125.75617892836415 Pearson Correlation: -0.025978317563084535 Spearman Correlation: -0.07951470716592478 Coefficient of Determination: -0.015856362232976595 RMSE: 0.21582241506763142 NRMSE: 0.14844480329848297 MAPE: 124.4036809671064 Predictor: ElasticNet Pearson Correlation: 0.05524239225970014 Spearman Correlation: 0.007235394469500479 Coefficient of Determination: 0.0030381652329104503 RMSE: 0.18976122736198942 NRMSE: 0.12789557825060618 MAPE: 120.58035664283136 Pearson Correlation: -0.05059966244107336 Spearman Correlation: 0.05298569807603587 Coefficient of Determination: -0.014285125562911727 RMSE: 0.21565544297763628 NRMSE: 0.1483299582345544 MAPE: 116.8628824244034 Predictor: RandomForests Pearson Correlation: 0.2847852536520081 Spearman Correlation: 0.24810712888855369 Coefficient of Determination: 0.04356944145348551 RMSE: 0.18586385299339783 NRMSE: 0.1252688195841519 MAPE: 118.71205027999494 Pearson Correlation: -0.008597785420769612 Spearman Correlation: -0.1128019880749639 Coefficient of Determination: -0.012088332481777764 RMSE: 0.2154217773299026 NRMSE: 0.14816924067838874 MAPE: 157.49003513886964 Protein: CDKN2A x_train_column_count: 5 x_train columns: ['CDKN2A', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.5923052543595378 Spearman Correlation: 0.47781321502585306 Coefficient of Determination: 0.350825514341917 RMSE: 0.5378848156379121 NRMSE: 0.1255801306588327 MAPE: 192.69217004481166 Pearson Correlation: 0.6103541469679958 Spearman Correlation: 0.5732814623623737 Coefficient of Determination: 0.3680520317737882 RMSE: 0.5219184559513845 NRMSE: 0.16113070172312818 MAPE: 118.96569134234598 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.5763871578835018 Spearman Correlation: 0.4770131653521852 Coefficient of Determination: 0.32912991915269163 RMSE: 0.5467990798699565 NRMSE: 0.12766134662634396 MAPE: 172.08560607831998 Pearson Correlation: 0.6025516880935475 Spearman Correlation: 0.5740296013666005 Coefficient of Determination: 0.3505522888698044 RMSE: 0.5290955256211832 NRMSE: 0.16334646217195617 MAPE: 110.18278848949525 Predictor: RandomForests Pearson Correlation: 0.6244443517899272 Spearman Correlation: 0.49539654148605 Coefficient of Determination: 0.3893915433372369 RMSE: 0.5216629230729466 NRMSE: 0.12179280049331029 MAPE: 264.141087000334 Pearson Correlation: 0.6251797457998285 Spearman Correlation: 0.5733110855363031 Coefficient of Determination: 0.38811166296195954 RMSE: 0.5135681488886652 NRMSE: 0.15855273035369863 MAPE: 124.73179501297591 Protein: TP53 x_train_column_count: 5 x_train columns: ['TP53', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.3560426463464714 Spearman Correlation: 0.29871023780362554 Coefficient of Determination: 0.12676636601739855 RMSE: 0.42061678200224345 NRMSE: 0.1010855039659321 MAPE: 613.5156191354113 Pearson Correlation: 0.29052143855011203 Spearman Correlation: 0.2638162570605619 Coefficient of Determination: 0.06907529011050206 RMSE: 0.41531566640465 NRMSE: 0.15487087113150663 MAPE: 484.0455401589141 Predictor: ElasticNet Pearson Correlation: 0.35454408193353437 Spearman Correlation: 0.29871023780362554 Coefficient of Determination: 0.12499162558552324 RMSE: 0.42104399110190344 NRMSE: 0.10118817378079872 MAPE: 564.3187851427359 Pearson Correlation: 0.29610139734627333 Spearman Correlation: 0.2638162570605619 Coefficient of Determination: 0.0752600951565301 RMSE: 0.41393374637582825 NRMSE: 0.15435555428697137 MAPE: 456.8408267094502 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.45579562950668484 Spearman Correlation: 0.35162246446507417 Coefficient of Determination: 0.20647455101088552 RMSE: 0.4009606918750126 NRMSE: 0.09636161785027941 MAPE: 818.1588803801528 Pearson Correlation: 0.2985174116611321 Spearman Correlation: 0.26907455660028845 Coefficient of Determination: 0.06587464671091336 RMSE: 0.4160290091347362 NRMSE: 0.15513687605007895 MAPE: 471.91574744833787 Protein: CTNNB1 x_train_column_count:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
5 x_train columns: ['CTNNB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.12175638324133499 Spearman Correlation: 0.07970165590712093 Coefficient of Determination: 0.01482461686001102 RMSE: 0.7634746227907716 NRMSE: 0.1501720343805609 MAPE: 476.6290044282374 Pearson Correlation: 0.1733909902157128 Spearman Correlation: 0.19586528510330556 Coefficient of Determination: 0.02038739905011222 RMSE: 0.6066897593281069 NRMSE: 0.1983359244591542 MAPE: 1364.0202228543503 Predictor: ElasticNet Pearson Correlation: 0.06975206635884999 Spearman Correlation: 0.07905900378016163 Coefficient of Determination: 0.004498136696509114 RMSE: 0.767465512877197 NRMSE: 0.15095702456278462 MAPE: 442.408794980825 Pearson Correlation: 0.2432851379195773 Spearman Correlation: 0.26859935909425303 Coefficient of Determination: 0.01742528974328783 RMSE: 0.6076063078427362 NRMSE: 0.19863555782887185 MAPE: 1285.040011460338 Predictor: RandomForests Pearson Correlation: 0.28254567065725444 Spearman Correlation: 0.27230027564565956 Coefficient of Determination: 0.05685523767381295 RMSE: 0.7470110206013802 NRMSE: 0.14693371766352878 MAPE: 450.16870224840596 Pearson Correlation: 0.20590790949456775 Spearman Correlation: 0.1399556799237513 Coefficient of Determination: 0.026453487374958562 RMSE: 0.6048084295659103 NRMSE: 0.1977208897204584 MAPE: 1426.5538436896502 Protein: CCNE1 x_train_column_count: 5 x_train columns: ['CCNE1', '2', '1/2', '3', '1/3'] Predictor: Zero
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.8648486034764192 Spearman Correlation: 0.7246009514326041 Coefficient of Determination: 0.7479631069351131 RMSE: 0.2622734513545944 NRMSE: 0.06329450765127649 MAPE: 52.61706446394111 Pearson Correlation: 0.797011304893519 Spearman Correlation: 0.6658063068118056 Coefficient of Determination: 0.5544450701263315 RMSE: 0.24356280131018374 NRMSE: 0.1060952220717793 MAPE: 61.38256620939385 Predictor: ElasticNet Pearson Correlation: 0.8493780784418805 Spearman Correlation: 0.7245810696356663 Coefficient of Determination: 0.7161849921749166 RMSE: 0.27831713879652087 NRMSE: 0.0671663341449721 MAPE: 57.7398506771848 Pearson Correlation: 0.7934223163171559 Spearman Correlation: 0.6712078704223245 Coefficient of Determination: 0.5908336574372088 RMSE: 0.23340506960651128 NRMSE: 0.10167054476042657 MAPE: 50.7007546604051 Predictor: RandomForests Pearson Correlation: 0.861916202746039 Spearman Correlation: 0.7259868986086608 Coefficient of Determination: 0.7407565992177573 RMSE: 0.2659966258400488 NRMSE: 0.06419302213964544 MAPE: 55.85606635560681 Pearson Correlation: 0.766664604749035 Spearman Correlation: 0.6683249776710507 Coefficient of Determination: 0.5125961881082448 RMSE: 0.25474448720884857 NRMSE: 0.11096593074393368 MAPE: 78.77942188814325 Protein: CCND1 x_train_column_count: 5 x_train columns: ['CCND1', '2', '1/2', '3', '1/3'] Predictor: Zero
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.446946026769647 Spearman Correlation: 0.40702588796834765 Coefficient of Determination: 0.19976075084517397 RMSE: 0.21886002240610355 NRMSE: 0.1315723163158454 MAPE: 504.00220564795353 Pearson Correlation: 0.3830820134374951 Spearman Correlation: 0.3490592152021846 Coefficient of Determination: 0.13425367058979887 RMSE: 0.19515323076781704 NRMSE: 0.18492152290545802 MAPE: 289.524102068843 Predictor: ElasticNet Pearson Correlation: 0.4393984867234141 Spearman Correlation: 0.40702588796834765 Coefficient of Determination: 0.18919133341650518 RMSE: 0.22030061333421522 NRMSE: 0.13243835792176073 MAPE: 517.2287484687517 Pearson Correlation: 0.3860850547812802 Spearman Correlation: 0.3490592152021846 Coefficient of Determination: 0.13203522611691088 RMSE: 0.19540310743494305 NRMSE: 0.18515829876431356 MAPE: 329.3340667199676 Predictor: RandomForests Pearson Correlation: 0.48706623370161345 Spearman Correlation: 0.4330254609697022 Coefficient of Determination: 0.23308628989970548 RMSE: 0.21425440816258526 NRMSE: 0.128803554221174 MAPE: 532.0823168181331 Pearson Correlation: 0.3682241478957792 Spearman Correlation: 0.3545397794492318 Coefficient of Determination: 0.12538407752351843 RMSE: 0.19615035827191662 NRMSE: 0.18586637191391944 MAPE: 242.12255902019984 Protein: ERBB2
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['ERBB2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 0.8081943274367627 Spearman Correlation: 0.6169901594350615 Coefficient of Determination: 0.6531780709009607 RMSE: 0.5778648972076448 NRMSE: 0.09844879588524878 MAPE: 464.7857090756129 Pearson Correlation: 0.8661755205655538 Spearman Correlation: 0.6932065153018709 Coefficient of Determination: 0.7469952894576282 RMSE: 0.5364656468962529 NRMSE: 0.09677206993582742 MAPE: 152.50374486642932 Predictor: ElasticNet Pearson Correlation: 0.7938087383658788 Spearman Correlation: 0.6175530917196634 Coefficient of Determination: 0.6270904899497811 RMSE: 0.5992040891917181 NRMSE: 0.1020842784455284 MAPE: 309.69792467720805 Pearson Correlation: 0.8432898408148273 Spearman Correlation: 0.6928548895314424 Coefficient of Determination: 0.7036393210172162 RMSE: 0.580614535044586 NRMSE: 0.10473600819766687 MAPE: 129.50159115311024 Predictor: RandomForests Pearson Correlation: 0.8199257163901502 Spearman Correlation: 0.6221141331085372 Coefficient of Determination: 0.6701060965884187 RMSE: 0.5635859838061675 NRMSE: 0.09601614798135638 MAPE: 549.6055263427428 Pearson Correlation: 0.8591364345208764 Spearman Correlation: 0.6851291397706071 Coefficient of Determination: 0.7357393782406054 RMSE: 0.5482691874962036 NRMSE: 0.09890128932394177 MAPE: 202.5750619662126 Protein: ERBB3 x_train_column_count: 5 x_train columns: ['ERBB3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.43383602669846155 Spearman Correlation: 0.45239457387178994 Coefficient of Determination: 0.18821369806150823 RMSE: 0.4063512740420006 NRMSE: 0.14734243239964198 MAPE: 212.48828513307174 Pearson Correlation: 0.3576571184486136 Spearman Correlation: 0.4060025686105812 Coefficient of Determination: 0.09866325774834006 RMSE: 0.4696826788299063 NRMSE: 0.1305853002932943 MAPE: 154.3865787300654 Predictor: ElasticNet Pearson Correlation: 0.42006249168802123 Spearman Correlation: 0.4548855783210745 Coefficient of Determination: 0.17505461332660088 RMSE: 0.4096315185400916 NRMSE: 0.14853184469902192 MAPE: 202.43292238954882 Pearson Correlation: 0.3673696133627151 Spearman Correlation: 0.4259180289031036 Coefficient of Determination: 0.11063847480650957 RMSE: 0.4665521289770331 NRMSE: 0.12971491734956087 MAPE: 146.0387177219113 Predictor: RandomForests Pearson Correlation: 0.4999670371266655 Spearman Correlation: 0.4714497591066353 Coefficient of Determination: 0.24935965713348107 RMSE: 0.39074795806764145 NRMSE: 0.14168469074598927 MAPE: 239.37646145796393 Pearson Correlation: 0.40626975868306575 Spearman Correlation: 0.4286995163716889 Coefficient of Determination: 0.13797837397707824 RMSE: 0.45932500401485127 NRMSE: 0.12770556864248314 MAPE: 166.29012768722592 Fold: 4 Protein: RB1 x_train_column_count: 5 x_train columns: ['RB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.2204879510904444 Spearman Correlation: 0.26021514955137454 Coefficient of Determination: 0.048614936576062195 RMSE: 0.2453210808208938 NRMSE: 0.08971660357697989 MAPE: 365.3967675224139 Pearson Correlation: 0.2484359247480619 Spearman Correlation: 0.36525393084701807 Coefficient of Determination: -0.03503203111178155 RMSE: 0.16774557067825693 NRMSE: 0.16071893867920223 MAPE: 117.17680617381629 Predictor: ElasticNet Pearson Correlation: 0.2180672577998453 Spearman Correlation: 0.260458123599966 Coefficient of Determination: 0.04480128096425939 RMSE: 0.24581227753067103 NRMSE: 0.08989623958845488 MAPE: 271.16069630167357 Pearson Correlation: 0.25638700651609647 Spearman Correlation: 0.3658524420503997 Coefficient of Determination: -0.02140854981828344 RMSE: 0.16663794869134016 NRMSE: 0.15965771345891633 MAPE: 108.28840279544478 Predictor: RandomForests Pearson Correlation: 0.3354885536922722 Spearman Correlation: 0.3686673283930569 Coefficient of Determination: 0.09971302248999536 RMSE: 0.23864216980832373 NRMSE: 0.08727405273856192 MAPE: 320.1669745200317 Pearson Correlation: 0.2489237660453198 Spearman Correlation: 0.34152871277647523 Coefficient of Determination: -0.03633114959068817 RMSE: 0.16785081043222436 NRMSE: 0.16081977008414552 MAPE: 112.5832654307591 Protein: CDH1 x_train_column_count: 5 x_train columns: ['CDH1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 0.5710314011463127 Spearman Correlation: 0.579955742966747 Coefficient of Determination: 0.3260768610951209 RMSE: 0.9186279553715198 NRMSE: 0.14627367844519595 MAPE: 692.7332195745231
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.5564381038400866 Spearman Correlation: 0.4449606603573611 Coefficient of Determination: 0.27966683387516544 RMSE: 0.9899921748001324 NRMSE: 0.1796001913573768 MAPE: 402.4220346666829 Predictor: ElasticNet Pearson Correlation: 0.5347124834067614 Spearman Correlation: 0.6031692816687639 Coefficient of Determination: 0.28479417349717473 RMSE: 0.946346097440915 NRMSE: 0.15068725477547132 MAPE: 753.8376859810955 Pearson Correlation: 0.49118654345895907 Spearman Correlation: 0.4323969126797093 Coefficient of Determination: 0.20762823006674835 RMSE: 1.038316016699619 NRMSE: 0.1883668982801094 MAPE: 374.1819642720707 Predictor: RandomForests Pearson Correlation: 0.7087465928671025 Spearman Correlation: 0.6151147498515491 Coefficient of Determination: 0.5020692188726259 RMSE: 0.7896214925151644 NRMSE: 0.12573190225075068 MAPE: 347.50739803543973 Pearson Correlation: 0.7565120663505035 Spearman Correlation: 0.44363902379888376 Coefficient of Determination: 0.5235914114602802 RMSE: 0.8051093072939526 NRMSE: 0.1460595238369349 MAPE: 167.38169848454703 Protein: CDH2 x_train_column_count: 5 x_train columns: ['CDH2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.15464320815122598 Spearman Correlation: 0.07280999726182202 Coefficient of Determination: 0.02391452182730347 RMSE: 0.3747999372521782 NRMSE: 0.13580691979570195 MAPE: 835.4689510741073 Pearson Correlation: -0.08372045421642012 Spearman Correlation: 0.23403034950560486 Coefficient of Determination: -0.1496543045107519 RMSE: 0.3573353557967923 NRMSE: 0.1843379120737858 MAPE: 159.15159880605424 Predictor: ElasticNet Pearson Correlation: 0.12751512840259602 Spearman Correlation: 0.07146547137499795 Coefficient of Determination: 0.016089634952033083 RMSE: 0.37629924899910205 NRMSE: 0.13635018805678023 MAPE: 632.0268030748405 Pearson Correlation: 0.20049713393004145 Spearman Correlation: -0.07145475629371938 Coefficient of Determination: -0.02590361523611029 RMSE: 0.33755584613563944 NRMSE: 0.17413429394971286 MAPE: 148.76726069654933 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.20057306579186213 Spearman Correlation: 0.1961265704482096 Coefficient of Determination: 0.0358863735313002 RMSE: 0.3724943538792095 NRMSE: 0.13497150296369648 MAPE: 884.4392933746244 Pearson Correlation: 0.14133557677306258 Spearman Correlation: -0.01051729715312325 Coefficient of Determination: -0.03611937647390562 RMSE: 0.33923234271175984 NRMSE: 0.17499914505785966 MAPE: 184.87888323216643 Protein: CDH3 x_train_column_count: 5
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train columns: ['CDH3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.3153597344177083 Spearman Correlation: 0.33051761874018165 Coefficient of Determination: 0.09945176209200757 RMSE: 0.19540293771310402 NRMSE: 0.13926118399668175 MAPE: 283.6906195153803 Pearson Correlation: 0.4260754558774707 Spearman Correlation: 0.31700395266773906 Coefficient of Determination: 0.07396214598841766 RMSE: 0.19996406605022313 NRMSE: 0.177976810839154 MAPE: 972.5848667107855 Predictor: ElasticNet Pearson Correlation: 0.3074086367952061 Spearman Correlation: 0.3309265441567785 Coefficient of Determination: 0.08845202966719878 RMSE: 0.1965926887604401 NRMSE: 0.14010910440899702 MAPE: 209.47425872151757 Pearson Correlation: 0.4296289786260937 Spearman Correlation: 0.3220264591827829 Coefficient of Determination: 0.04437846929352485 RMSE: 0.20313303259038437 NRMSE: 0.1807973303935635 MAPE: 683.0748147592656 Predictor: RandomForests Pearson Correlation: 0.3663132504205452 Spearman Correlation: 0.3552641817255142 Coefficient of Determination: 0.1322848493773633 RMSE: 0.19180776662098248 NRMSE: 0.13669895136692167 MAPE: 233.92290878853558 Pearson Correlation: 0.3440003051187035 Spearman Correlation: 0.3044321786945191 Coefficient of Determination: 0.029807706814033663 RMSE: 0.20467580132094204 NRMSE: 0.18217046239648077 MAPE: 815.6702764266524 Protein: PTEN
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['PTEN', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 0.41123574680936736 Spearman Correlation: 0.41125238018048427 Coefficient of Determination: 0.16911483945385808 RMSE: 0.5120799518529061 NRMSE: 0.09905601049460425 MAPE: 309.6523644440908 Pearson Correlation: 0.4422391683208272 Spearman Correlation: 0.4707165924762155 Coefficient of Determination: 0.1694184870715536 RMSE: 0.679485751221122 NRMSE: 0.10624435168808098 MAPE: 691.8604505450016 Predictor: ElasticNet Pearson Correlation: 0.39920647848956686 Spearman Correlation: 0.4125541754874478 Coefficient of Determination: 0.15853876357349594 RMSE: 0.5153286987975977 NRMSE: 0.09968444343809921 MAPE: 231.99259951687048 Pearson Correlation: 0.43159514441022534 Spearman Correlation: 0.4688213069988404 Coefficient of Determination: 0.15060439405437942 RMSE: 0.6871384150957315 NRMSE: 0.1074409217568183 MAPE: 503.4389459131695 Predictor: RandomForests Pearson Correlation: 0.4480573176513949 Spearman Correlation: 0.43918735631084993 Coefficient of Determination: 0.19430257847168086 RMSE: 0.5042585363760418 NRMSE: 0.09754304711699972 MAPE: 267.2980924374914 Pearson Correlation: 0.4369019922282608 Spearman Correlation: 0.47136556913177413 Coefficient of Determination: 0.15414707207868483 RMSE: 0.6857039517422424 NRMSE: 0.10721662915209794 MAPE: 505.4934788936625 Protein: BRCA2
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['BRCA2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.06463494151234789 Spearman Correlation: 0.05302749117099838 Coefficient of Determination: 0.004177675664304381 RMSE: 0.19139621468592377 NRMSE: 0.12330244141467146 MAPE: 119.50151937674318 Pearson Correlation: -0.10755866376167524 Spearman Correlation: -0.1188219304480106 Coefficient of Determination: -0.016082837875971645 RMSE: 0.20977418999919029 NRMSE: 0.20380078887719957 MAPE: 149.05768556912338 Predictor: ElasticNet Pearson Correlation: 0.01217162372587725 Spearman Correlation: -0.01572029885733223 Coefficient of Determination: 0.00013885885277520327 RMSE: 0.19178395054297487 NRMSE: 0.12355223098275077 MAPE: 107.69384817803605 Pearson Correlation: 0.1920871668418092 Spearman Correlation: 0.15346076634372002 Coefficient of Determination: 0.0010353708437598197 RMSE: 0.20799962426306434 NRMSE: 0.20207675458614446 MAPE: 134.6788535061352 Predictor: RandomForests Pearson Correlation: 0.29763516595347267 Spearman Correlation: 0.2280344744931572 Coefficient of Determination: 0.04371382172871208 RMSE: 0.18755832891386043 NRMSE: 0.1208299751418009 MAPE: 118.6607585803569 Pearson Correlation: -0.01293791502695214 Spearman Correlation: -0.026935047913685145 Coefficient of Determination: -0.008298672441980015 RMSE: 0.20896910974338787 NRMSE: 0.20301863359278338 MAPE: 117.40385811784273 Protein: CDKN2A x_train_column_count: 5 x_train columns: ['CDKN2A', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.6012841469125705 Spearman Correlation: 0.5050373287480362 Coefficient of Determination: 0.36154262532837744 RMSE: 0.538513835130297 NRMSE: 0.12173930939986367 MAPE: 207.15305048165126 Pearson Correlation: 0.5907696826899435 Spearman Correlation: 0.48797865310041283 Coefficient of Determination: 0.31396740340760343 RMSE: 0.5223700297679252 NRMSE: 0.15738777636876325 MAPE: 118.41578525359078 Predictor: ElasticNet Pearson Correlation: 0.5877508721950367 Spearman Correlation: 0.5043429685491743 Coefficient of Determination: 0.3418993527159233 RMSE: 0.5467352438810629 NRMSE: 0.12359788490585798 MAPE: 177.53991759543572 Pearson Correlation: 0.5814427799773892 Spearman Correlation: 0.4884824000299256 Coefficient of Determination: 0.311508379601664 RMSE: 0.5233053871698399 NRMSE: 0.15766959541122022 MAPE: 104.59782236354158 Predictor: RandomForests Pearson Correlation: 0.631455952482092 Spearman Correlation: 0.5174711962732899 Coefficient of Determination: 0.39824093745179523 RMSE: 0.5228080080913314 NRMSE: 0.11818876638212532 MAPE: 286.82642115624674 Pearson Correlation: 0.6229821547823983 Spearman Correlation: 0.48235825210423916 Coefficient of Determination: 0.3606491595478948 RMSE: 0.504284356911669 NRMSE: 0.15193864323943024 MAPE: 126.41824438706153 Protein: TP53
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['TP53', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 0.3377604656284808 Spearman Correlation: 0.2834980488193286 Coefficient of Determination: 0.11408213214156804 RMSE: 0.42366660455190736 NRMSE: 0.1018184581956038 MAPE: 681.5075033544412 Pearson Correlation: 0.37849021028752106 Spearman Correlation: 0.31250015586229263 Coefficient of Determination: 0.13769919119063012 RMSE: 0.4009816126283188 NRMSE: 0.12724727488839768 MAPE: 185.0957286546558 Predictor: ElasticNet Pearson Correlation: 0.33604220032282084 Spearman Correlation: 0.2833861559156332 Coefficient of Determination: 0.11230193694668222 RMSE: 0.4240920563784293 NRMSE: 0.1019207056905622 MAPE: 624.568309823261 Pearson Correlation: 0.37300035789367303 Spearman Correlation: 0.31250015586229263 Coefficient of Determination: 0.128635638475734 RMSE: 0.4030834417265588 NRMSE: 0.1279142681285094 MAPE: 190.23088923886496 Predictor: RandomForests Pearson Correlation: 0.4345026326267432 Spearman Correlation: 0.33659916441779625 Coefficient of Determination: 0.187163674974825 RMSE: 0.405815895032237 NRMSE: 0.09752845350450301 MAPE: 838.6147953296235 Pearson Correlation: 0.4382281627793782 Spearman Correlation: 0.25378423849339315 Coefficient of Determination: 0.18063167242045308 RMSE: 0.390872077950522 NRMSE: 0.12403912095408795 MAPE: 229.85658906022218 Protein: CTNNB1 x_train_column_count: 5 x_train columns: ['CTNNB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.1526794372992558 Spearman Correlation: 0.12160636063404076 Coefficient of Determination: 0.02331101057401752 RMSE: 0.703085896637557 NRMSE: 0.16981110439512054 MAPE: 595.2343989391917 Pearson Correlation: -0.0024524873214807168 Spearman Correlation: 0.029095125874387465 Coefficient of Determination: -0.15202388050314397 RMSE: 0.8612932239052142 NRMSE: 0.18108090654806455 MAPE: 972.7356187360066 Predictor: ElasticNet Pearson Correlation: 0.13117511277147784 Spearman Correlation: 0.13483122386239582 Coefficient of Determination: 0.016689384741219282 RMSE: 0.7054652147294455 NRMSE: 0.17038576338746148 MAPE: 563.8421531238293 Pearson Correlation: -0.050312014491869936 Spearman Correlation: 0.03373358770059477 Coefficient of Determination: -0.16360893524767528 RMSE: 0.8656130861031164 NRMSE: 0.18198912751305954 MAPE: 979.553598135257 Predictor: RandomForests Pearson Correlation: 0.27032259474413595 Spearman Correlation: 0.25320953554579556 Coefficient of Determination: 0.05478229106502086 RMSE: 0.6916655821319465 NRMSE: 0.1670528408201977 MAPE: 598.8029918230376 Pearson Correlation: 0.07267382808851819 Spearman Correlation: 0.13823949839064295 Coefficient of Determination: -0.133416084696651 RMSE: 0.8543089877843627 NRMSE: 0.17961251950726656 MAPE: 916.3275962998433 Protein: CCNE1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CCNE1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.8541483169194474 Spearman Correlation: 0.7100270026392314 Coefficient of Determination: 0.7295693472963252 RMSE: 0.2625131380131366 NRMSE: 0.06335235128342703 MAPE: 52.39107912096682 Pearson Correlation: 0.8651851807309705 Spearman Correlation: 0.7226748463197795 Coefficient of Determination: 0.7368299267358068 RMSE: 0.23192377244672663 NRMSE: 0.09463958722220137 MAPE: 61.214664613992255 Predictor: ElasticNet Pearson Correlation: 0.840978210990318 Spearman Correlation: 0.7105645817584747 Coefficient of Determination: 0.7018605552567532 RMSE: 0.27563401066028714 NRMSE: 0.06651881426268483 MAPE: 52.85460339561779 Pearson Correlation: 0.8601682539362936 Spearman Correlation: 0.7249192633324606 Coefficient of Determination: 0.6880610457637905 RMSE: 0.2525002554575751 NRMSE: 0.1030360954287012 MAPE: 72.54655382826873 Predictor: RandomForests Pearson Correlation: 0.8556229704698114 Spearman Correlation: 0.7158607537625539 Coefficient of Determination: 0.728543564079043 RMSE: 0.26301054223786346 NRMSE: 0.06347238995049435 MAPE: 55.53724592416665 Pearson Correlation: 0.8457132889189012 Spearman Correlation: 0.7088274541368929 Coefficient of Determination: 0.702334437874705 RMSE: 0.2466557886803146 NRMSE: 0.10065118284514593 MAPE: 69.85909188983415 Protein: CCND1 x_train_column_count: 5 x_train columns: ['CCND1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.4083551998053475 Spearman Correlation: 0.3728162437668544 Coefficient of Determination: 0.16675396920806518 RMSE: 0.2193579250456103 NRMSE: 0.14014510742618308 MAPE: 493.64814911428454 Pearson Correlation: 0.5587189212419966 Spearman Correlation: 0.49866706567413555 Coefficient of Determination: 0.2779041749474426 RMSE: 0.19459712068620505 NRMSE: 0.12272775018050269 MAPE: 502.8707371699629 Predictor: ElasticNet Pearson Correlation: 0.39877658160140295 Spearman Correlation: 0.3728160125831736 Coefficient of Determination: 0.1549425842143024 RMSE: 0.22090716959190612 NRMSE: 0.1411349009033274 MAPE: 518.1241761993751 Pearson Correlation: 0.5805540340701972 Spearman Correlation: 0.49870696642102774 Coefficient of Determination: 0.2547089068161589 RMSE: 0.19769785558063988 NRMSE: 0.12468330952361244 MAPE: 495.8071675497855 Predictor: RandomForests Pearson Correlation: 0.4534356859926931 Spearman Correlation: 0.39958808666818596 Coefficient of Determination: 0.2017398731339637 RMSE: 0.21470339955561016 NRMSE: 0.13717138776377133 MAPE: 504.67123379639156 Pearson Correlation: 0.5242023091192355 Spearman Correlation: 0.5018856606099847 Coefficient of Determination: 0.2566149026204868 RMSE: 0.19744489904588497 NRMSE: 0.12452377588665804 MAPE: 425.50401387716033 Protein: ERBB2 x_train_column_count: 5 x_train columns: ['ERBB2', '2', '1/2', '3', '1/3']
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 0.8307560770732572 Spearman Correlation: 0.6233112994727321 Coefficient of Determination: 0.6901556595941474 RMSE: 0.5459631089930017 NRMSE: 0.09301380121522423 MAPE: 448.94863435765916 Pearson Correlation: 0.8101575127201376 Spearman Correlation: 0.6713009779441096 Coefficient of Determination: 0.6070540322050613 RMSE: 0.6498382801783161 NRMSE: 0.11701629275368533 MAPE: 224.7552738109295 Predictor: ElasticNet Pearson Correlation: 0.8153543412966294 Spearman Correlation: 0.6238582415521245 Coefficient of Determination: 0.6612813583181025 RMSE: 0.5708356182908598 NRMSE: 0.09725124253213278 MAPE: 243.74977627542256 Pearson Correlation: 0.7985659696591226 Spearman Correlation: 0.67230847305938 Coefficient of Determination: 0.589283727037867 RMSE: 0.6643697159193388 NRMSE: 0.1196329664564661 MAPE: 159.87001482322748 Predictor: RandomForests Pearson Correlation: 0.8379695407254982 Spearman Correlation: 0.6244014898529843 Coefficient of Determination: 0.7013092430268829 RMSE: 0.5360464275979712 NRMSE: 0.09132433132834236 MAPE: 438.3335161573039 Pearson Correlation: 0.7900992351471164 Spearman Correlation: 0.6591518723084742 Coefficient of Determination: 0.5693064094780853 RMSE: 0.6803354119775974 NRMSE: 0.12250790722397044 MAPE: 216.86383935869551 Protein: ERBB3 x_train_column_count: 5 x_train columns: ['ERBB3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.44307205037645564 Spearman Correlation: 0.47303244992710514 Coefficient of Determination: 0.19631284182479625 RMSE: 0.4282655679739834 NRMSE: 0.11710235672031899 MAPE: 222.57880806032153 Pearson Correlation: 0.2743817787052386 Spearman Correlation: 0.3139166323769623 Coefficient of Determination: -0.004490436688556976 RMSE: 0.38544331895685247 NRMSE: 0.18971748313301492 MAPE: 208.679610838717 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.4345180808379465 Spearman Correlation: 0.47538235520825217 Coefficient of Determination: 0.18716655106021474 RMSE: 0.43069559310862693 NRMSE: 0.11776680815287884 MAPE: 211.39057101807813 Pearson Correlation: 0.27879908169329726 Spearman Correlation: 0.31188668187882645 Coefficient of Determination: 0.03373297581103496 RMSE: 0.3780386454639449 NRMSE: 0.1860728590095561 MAPE: 195.30280367189818 Predictor: RandomForests Pearson Correlation: 0.5017490953511003 Spearman Correlation: 0.49215263709416224 Coefficient of Determination: 0.25029249660793695 RMSE: 0.41363337474034334 NRMSE: 0.11310141795759678 MAPE: 238.28450019864076 Pearson Correlation: 0.40397360381896724 Spearman Correlation: 0.31976412704495044 Coefficient of Determination: 0.1383831305721237 RMSE: 0.35698068269032013 NRMSE: 0.1757080050846447 MAPE: 237.44905259552604 Fold: 5 Protein: RB1 x_train_column_count: 5 x_train columns: ['RB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.21132329395307273 Spearman Correlation: 0.27121610206667035 Coefficient of Determination: 0.044657534567176804 RMSE: 0.2286226030275073 NRMSE: 0.11294299710384062 MAPE: 224.10725802219594 Pearson Correlation: 0.2287111563757963 Spearman Correlation: 0.2819311961495779 Coefficient of Determination: -0.04436954566794271 RMSE: 0.24564418363345775 NRMSE: 0.12385504287430055 MAPE: 585.897400362271 Predictor: ElasticNet Pearson Correlation: 0.20444597454240537 Spearman Correlation: 0.27154453701595577 Coefficient of Determination: 0.03892931000987465 RMSE: 0.22930698817206452 NRMSE: 0.11328109363662454 MAPE: 178.28648591228483 Pearson Correlation: 0.23257901934039082 Spearman Correlation: 0.28244990585917534 Coefficient of Determination: -0.05148487714253824 RMSE: 0.24647955501675703 NRMSE: 0.12427624136133203 MAPE: 379.18622617889423 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.314434556462768 Spearman Correlation: 0.35954429627880335 Coefficient of Determination: 0.09129168779668184 RMSE: 0.22297279310288345 NRMSE: 0.110151906207735 MAPE: 211.20672480784424 Pearson Correlation: 0.21123097353652284 Spearman Correlation: 0.23779555867019272 Coefficient of Determination: -0.04878630534383244 RMSE: 0.24616306445127475 NRMSE: 0.12411666521351812 MAPE: 529.0921149732138 Protein: CDH1 x_train_column_count: 5 x_train columns: ['CDH1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.6028881954626025 Spearman Correlation: 0.5733715546744202 Coefficient of Determination: 0.36347417622815326 RMSE: 0.8984097961563444 NRMSE: 0.14305432886792527 MAPE: 352.69762120052997 Pearson Correlation: 0.46131278236630713 Spearman Correlation: 0.5106572401152134 Coefficient of Determination: 0.20356211855924466 RMSE: 1.036782853899249 NRMSE: 0.20388642384599104 MAPE: 1602.3141201731935 Predictor: ElasticNet Pearson Correlation: 0.5536209094471546 Spearman Correlation: 0.587234175852718 Coefficient of Determination: 0.30525263486237597 RMSE: 0.938598636874038 NRMSE: 0.14945362199835002 MAPE: 341.8883666663708 Pearson Correlation: 0.43026845468068237 Spearman Correlation: 0.5418695993715633 Coefficient of Determination: 0.18313081689260147 RMSE: 1.0499971209655496 NRMSE: 0.20648504866483447 MAPE: 1877.3469341912119 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.7477132730675663 Spearman Correlation: 0.5990881223566048 Coefficient of Determination: 0.5587490298670774 RMSE: 0.7480132684931943 NRMSE: 0.11910659986834722 MAPE: 166.2197926101653 Pearson Correlation: 0.616013622220581 Spearman Correlation: 0.5412740364706119 Coefficient of Determination: 0.3622554955236724 RMSE: 0.9277590822668783 NRMSE: 0.1824465757343766 MAPE: 665.3142844496236 Protein: CDH2 x_train_column_count: 5 x_train columns: ['CDH2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.17514355035306944 Spearman Correlation: 0.1152318148212481 Coefficient of Determination: 0.030675263230278138 RMSE: 0.3535852020298994 NRMSE: 0.17365807280089354 MAPE: 919.5652557736498 Pearson Correlation: 0.11767512503161758 Spearman Correlation: 0.06817300486670329 Coefficient of Determination: -0.47079370738306725 RMSE: 0.5058331619586995 NRMSE: 0.18915661498371428 MAPE: 366.562947929486 Predictor: ElasticNet Pearson Correlation: 0.1391534109434261 Spearman Correlation: 0.07886292148061753 Coefficient of Determination: 0.018552538580420164 RMSE: 0.35578936394342553 NRMSE: 0.17474061389098056 MAPE: 281.3519490396724 Pearson Correlation: 0.1549111764598373 Spearman Correlation: -0.1015076266632875 Coefficient of Determination: 0.009859693810458592 RMSE: 0.41503028281078874 NRMSE: 0.15520082374241861 MAPE: 321.08404537801636 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.22236045117771516 Spearman Correlation: 0.233718449793975 Coefficient of Determination: 0.044985019096691836 RMSE: 0.3509655790601743 NRMSE: 0.172371484239563 MAPE: 516.4114417240233 Pearson Correlation: 0.026083095693037423 Spearman Correlation: 0.012711204794006536 Coefficient of Determination: -0.02969296785917397 RMSE: 0.4232386200579222 NRMSE: 0.15827033639022575 MAPE: 421.1241501379879 Protein: CDH3 x_train_column_count: 5 x_train columns: ['CDH3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.3392192640511742 Spearman Correlation: 0.3388044301036067 Coefficient of Determination: 0.11506970910342029 RMSE: 0.19168585401625152 NRMSE: 0.13448241427867452 MAPE: 492.8284197853399 Pearson Correlation: 0.31791408883272004 Spearman Correlation: 0.29623561391039793 Coefficient of Determination: 0.09848214399767774 RMSE: 0.21210702881603233 NRMSE: 0.19136497876743053 MAPE: 154.23974487112534 Predictor: ElasticNet Pearson Correlation: 0.32375862446108333 Spearman Correlation: 0.34098087037844793 Coefficient of Determination: 0.09944064966304611 RMSE: 0.19337116041922242 NRMSE: 0.13566478673403382 MAPE: 368.7571425487724 Pearson Correlation: 0.3275100923438726 Spearman Correlation: 0.2942804773126847 Coefficient of Determination: 0.09308088221674582 RMSE: 0.21274147810950297 NRMSE: 0.19193738495430576 MAPE: 123.43057181994261 Predictor: RandomForests Pearson Correlation: 0.36965505977322854 Spearman Correlation: 0.37023702110479534 Coefficient of Determination: 0.1352943984872248 RMSE: 0.18948274589968064 NRMSE:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
0.1329367639751927 MAPE: 428.8762610239707 Pearson Correlation: 0.33392383751857757 Spearman Correlation: 0.2896321859679133 Coefficient of Determination: 0.1080813307623334 RMSE: 0.21097476953916952 NRMSE: 0.190343443678822 MAPE: 147.6576392773054 Protein: PTEN x_train_column_count: 5 x_train columns: ['PTEN', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 0.41036410367867976 Spearman Correlation: 0.4203627896148745 Coefficient of Determination: 0.1683986975880063 RMSE: 0.5189086300298511 NRMSE: 0.08113652255958895 MAPE: 456.5115848568204 Pearson Correlation: 0.4005238171125362 Spearman Correlation: 0.4092794174490954 Coefficient of Determination: 0.15407065217578075 RMSE: 0.6637835443110868 NRMSE: 0.12840133556002142 MAPE: 337.05295143841 Predictor: ElasticNet Pearson Correlation: 0.3924045632114084 Spearman Correlation: 0.4204847775371454 Coefficient of Determination: 0.15300443213047488 RMSE: 0.5236895188909417 NRMSE: 0.08188406205784407 MAPE: 323.2879772198906 Pearson Correlation: 0.42041778017754283 Spearman Correlation: 0.428546490604621 Coefficient of Determination: 0.1681691731524052 RMSE: 0.658228891927692 NRMSE: 0.1273268515799466 MAPE: 221.01322172334986 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.4424671859038725 Spearman Correlation: 0.4428962297133376 Coefficient of Determination: 0.19271326579155623 RMSE: 0.5112663634263578 NRMSE: 0.07994157820754558 MAPE: 489.48352669459763 Pearson Correlation: 0.4124809121288077 Spearman Correlation: 0.4376523846678659 Coefficient of Determination: 0.1632524121174317 RMSE: 0.6601713457348014 NRMSE: 0.12770259705485945 MAPE: 405.61580355046533 Protein: BRCA2 x_train_column_count: 5 x_train columns: ['BRCA2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.08569016745320186 Spearman Correlation: 0.06828908567074878 Coefficient of Determination: 0.007342804798157743 RMSE: 0.19973084535001132 NRMSE: 0.1286718282171115 MAPE: 124.38660279576759 Pearson Correlation: -0.12140264546064225 Spearman Correlation: -0.0528460454619135 Coefficient of Determination: -0.13269282967087026 RMSE: 0.17676373384309033 NRMSE: 0.23116946817902348 MAPE: 105.39250297716956 Predictor: ElasticNet Pearson Correlation: 0.04051559147953111 Spearman Correlation: 0.04263289576165543 Coefficient of Determination: 0.0016330168555748203 RMSE: 0.2003044499870038 NRMSE: 0.12904135930874783 MAPE: 108.17420896061232 Pearson Correlation: -0.1235411978068914 Spearman Correlation: -0.039903240688786645 Coefficient of Determination: -0.10016464320070595 RMSE: 0.1742071327806532 NRMSE: 0.2278259763037379 MAPE: 104.52379136838272 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.2806545371462066 Spearman Correlation: 0.2261649981634978 Coefficient of Determination: 0.04202748574773785 RMSE: 0.1962103972378136 NRMSE: 0.1264038635772676 MAPE: 124.04007121110996 Pearson Correlation: -0.08084835885705399 Spearman Correlation: -0.009163349322339706 Coefficient of Determination: -0.11690642357710335 RMSE: 0.1755276285743108 NRMSE: 0.22955290469405715 MAPE: 121.66442003308069 Protein: CDKN2A x_train_column_count: 5 x_train columns: ['CDKN2A', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.6512931110737796 Spearman Correlation: 0.5425255638097976 Coefficient of Determination: 0.42418271653216244 RMSE: 0.5157646932104025 NRMSE: 0.13133474910504 MAPE: 184.24043138570073 Pearson Correlation: 0.3694096305617066 Spearman Correlation: 0.3118318183518498 Coefficient of Determination: -0.045139930085897007 RMSE: 0.619474789299813 NRMSE: 0.1558780074230173 MAPE: 337.64255077829523 Predictor: ElasticNet Pearson Correlation: 0.6331742373774292 Spearman Correlation: 0.543492990453 Coefficient of Determination: 0.3973564805307074 RMSE: 0.5276421803657033 NRMSE: 0.13435924228201557 MAPE: 135.0472174902772 Pearson Correlation: 0.3754359987341668 Spearman Correlation: 0.30912355515654816 Coefficient of Determination: 0.02626812050716343 RMSE: 0.5979379398801534 NRMSE: 0.15045870508546674 MAPE: 305.2762001082538 Predictor: RandomForests Pearson Correlation: 0.6805857751377878 Spearman Correlation: 0.5580779519067558 Coefficient of Determination: 0.462693732968645 RMSE: 0.4982189177350634 NRMSE: 0.12686687829061227 MAPE: 263.88651979873646 Pearson Correlation: 0.37959596276014945 Spearman Correlation: 0.3102182095928762 Coefficient of Determination: -0.060684827700250965 RMSE: 0.6240646671628612 NRMSE: 0.15703295517547652 MAPE: 482.3181338040869 Protein: TP53 x_train_column_count: 5 x_train columns: ['TP53', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.3536574576045275 Spearman Correlation: 0.29103378368042804 Coefficient of Determination: 0.12507359731929812 RMSE: 0.3964053187245593 NRMSE: 0.10081775190736268 MAPE: 693.728974623033 Pearson Correlation: 0.3168045489790781 Spearman Correlation: 0.3143754909662216 Coefficient of Determination: 0.09187757253344409 RMSE: 0.5032989489028138 NRMSE: 0.1348062003221679 MAPE: 147.00925993507363 Predictor: ElasticNet Pearson Correlation: 0.3447348251525646 Spearman Correlation: 0.28111369193441366 Coefficient of Determination: 0.1181605012597221 RMSE: 0.39796830512592934 NRMSE: 0.10121526618833881 MAPE: 637.3340240652566 Pearson Correlation: 0.35561361085356985 Spearman Correlation: 0.3358321176074515 Coefficient of Determination: 0.1044424020015593 RMSE: 0.4998049858343005 NRMSE: 0.13387035913601192 MAPE: 161.16861259078505 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.4314553078595232 Spearman Correlation: 0.3466420074595666 Coefficient of Determination: 0.18524341110093945 RMSE: 0.38253189541214233 NRMSE: 0.09728932460442594 MAPE: 844.9578167008863 Pearson Correlation: 0.4392345305623959 Spearman Correlation: 0.3073273861368251 Coefficient of Determination: 0.17124969531194978 RMSE: 0.4808013442995381 NRMSE: 0.128780325244285 MAPE: 184.64956614821594 Protein: CTNNB1 x_train_column_count: 5 x_train columns: ['CTNNB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.0987516483129611 Spearman Correlation: 0.07716037068378853 Coefficient of Determination: 0.009751888044526646 RMSE: 0.7522856434979593 NRMSE: 0.14797121233240743 MAPE: 718.42987125547 Pearson Correlation: 0.29012326987476783 Spearman Correlation: 0.2293270489656979 Coefficient of Determination: 0.049814721422314356 RMSE: 0.6605634599318697 NRMSE: 0.21155699958425106 MAPE: 271.67584640681395 Predictor: ElasticNet Pearson Correlation: 0.06675621882931884 Spearman Correlation: 0.07821356653346326 Coefficient of Determination: 0.004076555217307654 RMSE: 0.7544383219532812 NRMSE: 0.14839463453054313 MAPE: 681.2024083721333 Pearson Correlation: 0.23532119597851975 Spearman Correlation: 0.23237945610294397 Coefficient of Determination: 0.021696542996561763 RMSE: 0.670266002809708 NRMSE: 0.21466440861318029 MAPE: 272.4349206140025 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.2713055629727939 Spearman Correlation: 0.26371649271517006 Coefficient of Determination: 0.053411607523171756 RMSE: 0.7355146876860887 NRMSE: 0.14467244053620945 MAPE: 720.5811387561265 Pearson Correlation: 0.22578045319806445 Spearman Correlation: 0.2610385476917296 Coefficient of Determination: 0.04094858945371527 RMSE: 0.6636381466799675 NRMSE: 0.21254172178362327 MAPE: 272.38990168301905 Protein: CCNE1 x_train_column_count: 5 x_train columns: ['CCNE1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.8533349550349572 Spearman Correlation: 0.7122427330104267 Coefficient of Determination: 0.7281805454845127 RMSE: 0.23398414515487498 NRMSE: 0.0833425272145592 MAPE: 51.578222170585185 Pearson Correlation: 0.8140370142938504 Spearman Correlation: 0.7181660619209717 Coefficient of Determination: 0.6486052881336486 RMSE: 0.38418200637320704 NRMSE: 0.09271472509428942 MAPE: 72.06959718995843 Predictor: ElasticNet Pearson Correlation: 0.8412924394944226 Spearman Correlation: 0.7126182523838511 Coefficient of Determination: 0.6973982579971827 RMSE: 0.2468777064683058 NRMSE: 0.08793506908933421 MAPE: 50.1444737366491 Pearson Correlation: -0.25126945659705885 Spearman Correlation: 0.6308432773475979 Coefficient of Determination: -4.7067578926559115 RMSE: 1.5482252055160803 NRMSE: 0.37363351727105737 MAPE: 85.31368672572299 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.8556506969720328 Spearman Correlation: 0.71149071821961 Coefficient of Determination: 0.7307344185110212 RMSE: 0.2328823549345071 NRMSE: 0.08295008190009157 MAPE: 56.506980035446375 Pearson Correlation: 0.8008047212182496 Spearman Correlation: 0.731418081484767 Coefficient of Determination: 0.613938388761612 RMSE: 0.40268710156314313 NRMSE: 0.09718056364194877 MAPE: 78.42436912091661 Protein: CCND1 x_train_column_count: 5 x_train columns: ['CCND1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.4595841804629175 Spearman Correlation: 0.42762480845950407 Coefficient of Determination: 0.2112176189317717 RMSE: 0.20215601612150663 NRMSE: 0.12732793517680302 MAPE: 528.9787037195398 Pearson Correlation: 0.35315225223585595 Spearman Correlation: 0.2776817666055687 Coefficient of Determination: 0.12338378696757324 RMSE: 0.25837424713797225 NRMSE: 0.16507216055121468 MAPE: 237.49208188412183 Predictor: ElasticNet Pearson Correlation: 0.44720521865376117 Spearman Correlation: 0.42726285187649277 Coefficient of Determination: 0.19503470755598185 RMSE: 0.20421923614115087 NRMSE: 0.12862745398389527 MAPE: 567.9648543026689 Pearson Correlation: 0.3791574800351909 Spearman Correlation: 0.2762503273108144 Coefficient of Determination: 0.1359848703949732 RMSE: 0.25651050077328236 NRMSE: 0.16388143569164867 MAPE: 244.6131397590494 Predictor: RandomForests Pearson Correlation: 0.4910622772457089 Spearman Correlation: 0.4512173853537595
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Coefficient of Determination: 0.2379668962193563 RMSE: 0.19869868310943 NRMSE: 0.12515033451919153 MAPE: 544.4044592172377 Pearson Correlation: 0.3915172806219768 Spearman Correlation: 0.2942353603372814 Coefficient of Determination: 0.15031197988531664 RMSE: 0.2543748804069102 NRMSE: 0.1625170138427251 MAPE: 251.68895816463913 Protein: ERBB2 x_train_column_count: 5 x_train columns: ['ERBB2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.8294933775994715 Spearman Correlation: 0.6434197724011991 Coefficient of Determination: 0.6880592634813794 RMSE: 0.5741105184499948 NRMSE: 0.09780917567337255 MAPE: 452.25227890482216 Pearson Correlation: 0.7884723955068715 Spearman Correlation: 0.5872666741480568 Coefficient of Determination: 0.6204184871808535 RMSE: 0.5346040859979282 NRMSE: 0.11828832525676031 MAPE: 260.7996054067749 Predictor: ElasticNet Pearson Correlation: 0.8159188018194615 Spearman Correlation: 0.6442627066647334 Coefficient of Determination: 0.6632602070611455 RMSE: 0.596494821156397 NRMSE: 0.10162271004589621 MAPE: 290.07775685227097 Pearson Correlation: 0.7538335147490945 Spearman Correlation: 0.5872666741480568 Coefficient of Determination: 0.5642555227677799 RMSE: 0.5727903508617181 NRMSE: 0.12673754859203853 MAPE: 177.41904833206596 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.8379526307950729 Spearman Correlation: 0.6476514151513021 Coefficient of Determination: 0.7006167559088247 RMSE: 0.5624361182163328 NRMSE: 0.09582024945335073 MAPE: 556.978378220025 Pearson Correlation: 0.7748817378048788 Spearman Correlation: 0.5803322760177033 Coefficient of Determination: 0.5946155848404298 RMSE: 0.5524758156998603 NRMSE: 0.12224268518638351 MAPE: 295.861148659708 Protein: ERBB3 x_train_column_count: 5 x_train columns: ['ERBB3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.38672419617972364 Spearman Correlation: 0.41024558512766707 Coefficient of Determination: 0.14955560391085343 RMSE: 0.43242684940531223 NRMSE: 0.11669959530243457 MAPE: 217.4285051561768 Pearson Correlation: 0.5286360256233825 Spearman Correlation: 0.5591915111160988 Coefficient of Determination: 0.25007393506333087 RMSE: 0.36108833693560355 NRMSE: 0.17470551031313675 MAPE: 194.78201364236284 Predictor: ElasticNet Pearson Correlation: 0.37635766863544023 Spearman Correlation: 0.41142820549776254 Coefficient of Determination: 0.14063475251435165 RMSE: 0.43468893270462344 NRMSE: 0.11731006665945844 MAPE: 212.942474814796 Pearson Correlation: 0.5238658595015365 Spearman Correlation: 0.5619845633985462 Coefficient of Determination: 0.22172641109339153 RMSE: 0.36784968048806455 NRMSE: 0.1779768537903585 MAPE: 189.13507134612232 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.46247361973981643 Spearman Correlation: 0.42563267771628494 Coefficient of Determination: 0.21289293377250285 RMSE: 0.41601270604680346 NRMSE: 0.1122698891225144 MAPE: 251.7081601814871 Pearson Correlation: 0.5454220528253991 Spearman Correlation: 0.5588239281487987 Coefficient of Determination: 0.2690165838491837 RMSE: 0.35649873973468654 NRMSE: 0.17248492371673016 MAPE: 218.40318519679585
Min-Max
scenario = Scenario.selfmRNA_Polynomial
normalizeTechnique = NormalizeTechnique.MinMax
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.266811 | 0.102965 | 0.232299 | 0.000000 | 0.0 | 0.00000 | 0.165596 | 0.256402 | 0.0 | 0.00000 | ... | 0.362558 | 0.154626 | 0.343226 | 0.136973 | 0.283236 | 0.203583 | 0.106969 | 0.050188 | 0.019658 | 0.021305 |
| TCGA-A1-A0SH-01 | 0.074647 | 0.046655 | 0.060467 | 0.000000 | 0.0 | 0.00000 | 0.019946 | 0.108076 | 0.0 | 0.00000 | ... | 0.437102 | 0.171136 | 0.196632 | 0.028737 | 0.498917 | 0.208787 | 0.168174 | 0.119445 | 0.172767 | 0.000000 |
| TCGA-A1-A0SJ-01 | 0.122769 | 0.097168 | 0.035285 | 0.088368 | 0.0 | 0.00000 | 0.020200 | 0.129369 | 0.0 | 0.29443 | ... | 0.415293 | 0.914898 | 0.215818 | 0.074090 | 0.379839 | 0.104565 | 0.110857 | 0.079787 | 0.016343 | 0.000000 |
| TCGA-A1-A0SK-01 | 0.716855 | 1.000000 | 0.116251 | 0.076144 | 0.0 | 0.01449 | 0.000000 | 0.094313 | 0.0 | 0.00000 | ... | 0.334733 | 0.181185 | 0.763246 | 0.229344 | 0.511470 | 0.000000 | 0.246798 | 0.166438 | 0.018601 | 0.000000 |
| TCGA-A1-A0SQ-01 | 0.025757 | 0.011574 | 0.044865 | 0.000000 | 0.0 | 0.00000 | 0.022276 | 0.153652 | 0.0 | 0.00000 | ... | 0.537294 | 0.183640 | 0.239462 | 0.036770 | 0.323545 | 0.099038 | 0.071604 | 0.075950 | 0.006561 | 0.000000 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 5 x_train columns: ['RB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.22018274092127488 Spearman Correlation: 0.2583967041492915 Coefficient of Determination: 0.048480439399605224 RMSE: 0.21860216685211623 NRMSE: 0.08278817150241098 MAPE: 164.24754948364892 Pearson Correlation: 0.20949785915689556 Spearman Correlation: 0.3324065944785875 Coefficient of Determination: 0.009556070717998244 RMSE: 0.27912295650126695 NRMSE: 0.13789092963806826 MAPE: 116.76481630956906 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.33833952530122474 Spearman Correlation: 0.33951132296467335 Coefficient of Determination: 0.09802974463538427 RMSE: 0.21283434446696822 NRMSE: 0.08060380400188154 MAPE: 145.37508650343958 Pearson Correlation: 0.27053666597285697 Spearman Correlation: 0.3280678885109722 Coefficient of Determination: 0.025911503927463886 RMSE: 0.27680875151246914 NRMSE: 0.1367476776416065 MAPE: 107.54919913765022 Protein: CDH1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CDH1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 0.7016392969997699 Spearman Correlation: 0.5634345406567709 Coefficient of Determination: 0.4922977030943312 RMSE: 0.804043907613327 NRMSE: 0.13514932977212898 MAPE: 391.16464135697294 Pearson Correlation: 0.6930526339832803 Spearman Correlation: 0.6154716613013366 Coefficient of Determination: 0.4792153007995953 RMSE: 0.8373391337273233 NRMSE: 0.1356190492253771 MAPE: 150.64967300379365 Predictor: ElasticNet Pearson Correlation: 0.6119050417009948 Spearman Correlation: 0.5636647709924965 Coefficient of Determination: 0.2244493676445486 RMSE: 0.9937571802219084 NRMSE: 0.16703766497267047 MAPE: 505.2502983638179 Pearson Correlation: 0.6550804829359766 Spearman Correlation: 0.6555360452638768 Coefficient of Determination: 0.2674652880194869 RMSE: 0.9930849156743825 NRMSE: 0.16084430625415155 MAPE: 280.28318933521774 Predictor: RandomForests Pearson Correlation: 0.7132134998444969 Spearman Correlation: 0.5781801023015845 Coefficient of Determination: 0.5084673634826771 RMSE: 0.7911364260120465 NRMSE: 0.13297974988856612 MAPE: 306.3488021625489 Pearson Correlation: 0.7364401058709691 Spearman Correlation: 0.6541481858577574 Coefficient of Determination: 0.5391683231489781 RMSE: 0.787668436688223 NRMSE: 0.1275741693965571 MAPE: 153.69171685807532 Protein: CDH2 x_train_column_count: 5 x_train columns: ['CDH2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.17008609333728647 Spearman Correlation: 0.0884999761807287 Coefficient of Determination: 0.02892927914674026 RMSE: 0.36578586472685987 NRMSE: 0.13513240928705844 MAPE: 483.1269052763977 Pearson Correlation:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
0.07169580403759196 Spearman Correlation: -0.0005023900107306605 Coefficient of Determination: 0.0019700932341811805 RMSE: 0.3747453024375418 NRMSE: 0.19339696673248788 MAPE: 99.12813435459367 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: RandomForests Pearson Correlation: 0.193268142876287 Spearman Correlation: 0.1288803543458318 Coefficient of Determination: 0.03655026477606105 RMSE: 0.36434768946861296 NRMSE: 0.1346011036616509 MAPE: 517.3640858335742 Pearson Correlation: 0.044230558158288136 Spearman Correlation: -0.05978684567685635 Coefficient of Determination: -0.006409334490806495 RMSE: 0.3763151890353155 NRMSE: 0.19420714715142465 MAPE: 98.36754929438122 Protein: CDH3 x_train_column_count: 5 x_train columns: ['CDH3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.30693836006651254 Spearman Correlation: 0.30737056164133547 Coefficient of Determination: 0.09421115688032011 RMSE: 0.19872088150616163 NRMSE: 0.13941802878301737 MAPE: 410.106151062482 Pearson Correlation: 0.43652126754579146 Spearman Correlation: 0.44880987220758956 Coefficient of Determination: 0.17280717344802776 RMSE: 0.1860651863652817 NRMSE: 0.14241390143610205 MAPE: 351.199913710246 Predictor: ElasticNet Pearson Correlation: 0.28996469465827424 Spearman Correlation: 0.3061115403229242 Coefficient of Determination: 0.0010869589812513292 RMSE: 0.20868626340991342 NRMSE: 0.14640951297210067 MAPE: 118.11807325118772 Pearson Correlation: 0.4636629726448006 Spearman Correlation: 0.4640717978733782 Coefficient of Determination: 0.001826187883099184 RMSE: 0.2043924400441735 NRMSE: 0.1564415427698016 MAPE: 109.11838144132129 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.3496682668189332 Spearman Correlation: 0.3307097672586625 Coefficient of Determination: 0.12015906260707776 RMSE: 0.19585384588255172 NRMSE: 0.13740658211437934 MAPE: 381.1612404025096 Pearson Correlation: 0.4456557812474688 Spearman Correlation: 0.4605862331967038 Coefficient of Determination: 0.17847992914693533 RMSE: 0.1854260861696705 NRMSE: 0.14192473549354423 MAPE: 326.56281030401266 Protein: PTEN x_train_column_count: 5 x_train columns: ['PTEN', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 0.42155639891925 Spearman Correlation: 0.4286223965218868 Coefficient of Determination: 0.1777097974697659 RMSE: 0.5680881039015993 NRMSE: 0.08882622217208963 MAPE: 570.4471156402282 Pearson Correlation: 0.40007827842936905 Spearman Correlation:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
0.40269729782460256 Coefficient of Determination: 0.14712170651264866 RMSE: 0.4586783680655446 NRMSE: 0.15116945753923425 MAPE: 191.8452688484082 Predictor: ElasticNet Pearson Correlation: 0.4101066083951139 Spearman Correlation: 0.4288996648292669 Coefficient of Determination: 0.055917792986515 RMSE: 0.6087066459002177 NRMSE: 0.09517733498557075 MAPE: 260.0764753487035 Pearson Correlation: 0.39094074178592825 Spearman Correlation: 0.40280460442883625 Coefficient of Determination: 0.05536719986306193 RMSE: 0.48272105128290277 NRMSE: 0.15909335287156506 MAPE: 150.0426662714109 Predictor: RandomForests Pearson Correlation: 0.45099025349953137 Spearman Correlation: 0.44652349897352256 Coefficient of Determination: 0.19953456263780123 RMSE: 0.5604984674177989 NRMSE: 0.08763950706243434 MAPE: 529.5773017269939 Pearson Correlation: 0.3866330546263069 Spearman Correlation: 0.3981096259406254 Coefficient of Determination: 0.13840788698258943 RMSE: 0.4610155617120034 NRMSE: 0.15193974085821746 MAPE: 202.21690083920234 Protein: BRCA2
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['BRCA2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.06015976604066663 Spearman Correlation: 0.031135536848122907 Coefficient of Determination: 0.0036191974500676682 RMSE: 0.19725330568770938 NRMSE: 0.12760101541388572 MAPE: 129.51458362448244 Pearson Correlation: -0.08988136768684726 Spearman Correlation: -0.04992201970789453 Coefficient of Determination: -0.030872528051649528 RMSE: 0.18756460414404852 NRMSE: 0.1877147759648204 MAPE: 110.44946082480878 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: RandomForests Pearson Correlation: 0.3257942376102405 Spearman Correlation: 0.25500959044958793 Coefficient of Determination: 0.04912356112431371 RMSE: 0.19269642508331206 NRMSE: 0.12465321897410636 MAPE: 133.9139947559344 Pearson Correlation: -0.03975777992192093 Spearman Correlation: -0.01067431406904905 Coefficient of Determination: -0.021845741347306546 RMSE: 0.18674159822161593 NRMSE: 0.18689111111050435 MAPE: 115.13583396986726 Protein: CDKN2A
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CDKN2A', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 0.5902830157176168 Spearman Correlation: 0.4874835306554973 Coefficient of Determination: 0.34843403864468425 RMSE: 0.5187969954543651 NRMSE: 0.11728201547515882 MAPE: 208.4978527085337 Pearson Correlation: 0.6377004120907168 Spearman Correlation: 0.5191688615744806 Coefficient of Determination: 0.3990290100680318 RMSE: 0.5789869907465781 NRMSE: 0.15635619517866003 MAPE: 377.4615477341449 Predictor: ElasticNet Pearson Correlation: 0.562125137009275 Spearman Correlation: 0.4872043250292133 Coefficient of Determination: 0.14123787801928456 RMSE: 0.5956000128152068 NRMSE: 0.13464451516111828 MAPE: 195.42571514800443 Pearson Correlation: 0.6740234299663662 Spearman Correlation: 0.5412203687445128 Coefficient of Determination: 0.16859272328257657 RMSE: 0.6810029013421282 NRMSE: 0.18390572545021014 MAPE: 300.3157308642479 Predictor: RandomForests Pearson Correlation: 0.6031166548470466 Spearman Correlation: 0.5142043852276713 Coefficient of Determination: 0.36338257195258583 RMSE: 0.5128112215701984 NRMSE: 0.11592883950948307 MAPE: 222.42155552398435 Pearson Correlation: 0.6736173012257093 Spearman Correlation: 0.5183481629817652 Coefficient of Determination: 0.4416816519711879 RMSE: 0.5580627074004604 NRMSE: 0.15070556505548485 MAPE: 518.4052407636528 Protein: TP53 x_train_column_count:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
5 x_train columns: ['TP53', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.39770760455902926 Spearman Correlation: 0.3000909123121332 Coefficient of Determination: 0.15817133872408118 RMSE: 0.4154674860276144 NRMSE: 0.09984798991290902 MAPE: 670.3192311186442 Pearson Correlation: 0.32946506284533145 Spearman Correlation: 0.2898156277436348 Coefficient of Determination: 0.09071975339201477 RMSE: 0.40110396599093134 NRMSE: 0.14423530727136227 MAPE: 1103.007270274808 Predictor: ElasticNet Pearson Correlation: 0.34033977800231224 Spearman Correlation: 0.2977431207885347 Coefficient of Determination: 0.0457357347479902 RMSE: 0.44234336627107707 NRMSE: 0.1063069854052096 MAPE: 411.250806039811 Pearson Correlation: 0.2657282239966221 Spearman Correlation: 0.2420007804116672 Coefficient of Determination: 0.03886107056510546 RMSE: 0.4123833876400117 NRMSE: 0.14829134008414963 MAPE: 321.6982286878238 Predictor: RandomForests Pearson Correlation: 0.45492238975734456 Spearman Correlation: 0.34634270161779623 Coefficient of Determination: 0.20619176236443626 RMSE: 0.40344374717794973 NRMSE: 0.09695836269597446 MAPE: 668.2271002590516 Pearson Correlation: 0.3281714473563291 Spearman Correlation: 0.28867684750577033 Coefficient of Determination: 0.08991864560113616 RMSE: 0.40128062042132523 NRMSE: 0.1442988314651103 MAPE: 1228.5562057380778 Protein: CTNNB1 x_train_column_count: 5 x_train columns: ['CTNNB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 0.16038078386318463 Spearman Correlation: 0.16306073530231419 Coefficient of Determination: 0.0257219958325694 RMSE: 0.727691817886278 NRMSE: 0.14666179291095352 MAPE: 635.2747882152647 Pearson Correlation: -0.07541558892175212 Spearman Correlation: -0.07804604428836212 Coefficient of Determination: -0.0648508064184512 RMSE: 0.7749253989324936
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
NRMSE: 0.1922605564760814 MAPE: 374.0930876977652 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: RandomForests Pearson Correlation: 0.3101921197195444 Spearman Correlation: 0.30218639412689285 Coefficient of Determination: 0.08112196149899753 RMSE: 0.7066998169279368 NRMSE: 0.14243098472860852 MAPE: 629.3479296651823 Pearson Correlation: -0.06020498570784447 Spearman Correlation: -0.04014575748895606 Coefficient of Determination: -0.07573696996622581 RMSE: 0.7788764282639427 NRMSE: 0.19324081483251693 MAPE: 401.59866873136957 Protein: CCNE1 x_train_column_count: 5 x_train columns: ['CCNE1', '2', '1/2', '3', '1/3'] Predictor: Zero
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.8546837034527556 Spearman Correlation: 0.710856879603905 Coefficient of Determination: 0.7304842329477176 RMSE: 0.25109743780914073 NRMSE: 0.06059739793159272 MAPE: 56.71402513327266 Pearson Correlation: 0.8480809615635369 Spearman Correlation: 0.7099209833187007 Coefficient of Determination: 0.718342798425444 RMSE: 0.2850145818173703 NRMSE: 0.10151899619496717 MAPE: 46.423707512162295 Predictor: ElasticNet Pearson Correlation: 0.847231646296382 Spearman Correlation: 0.7131090453751777 Coefficient of Determination: 0.23571531785541422 RMSE: 0.42284166125453027 NRMSE: 0.102044467807643 MAPE: 105.65494976761289 Pearson Correlation: 0.8398970064985707 Spearman Correlation: 0.7106623744024974 Coefficient of Determination: 0.21715488721207277 RMSE: 0.4751651406091533 NRMSE: 0.16924849175749004 MAPE: 72.89475059996361 Predictor: RandomForests Pearson Correlation: 0.8561811753710815 Spearman Correlation: 0.7204369297834651 Coefficient of Determination: 0.7277442789638863 RMSE: 0.2523705649588593 NRMSE: 0.06090464197670181 MAPE: 54.282600563515125 Pearson Correlation: 0.8346467335894345 Spearman Correlation: 0.7068181224371397 Coefficient of Determination: 0.6943052206560596 RMSE: 0.2969276634196074 NRMSE: 0.10576230219754493 MAPE: 44.97926614243301 Protein: CCND1 x_train_column_count: 5 x_train columns: ['CCND1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 0.4246144191686522 Spearman Correlation: 0.37521439038041693 Coefficient of Determination: 0.18029740496593172 RMSE: 0.2162884902152279 NRMSE: 0.13002638552814558 MAPE: 322.6707908693009 Pearson Correlation: 0.14489966107306512 Spearman Correlation: 0.42946054043507953 Coefficient of Determination: -0.31200887438731484 RMSE: 0.26911560504843196 NRMSE: 0.19166686018491252 MAPE: 1177.0938011179167 Predictor: ElasticNet Pearson Correlation: 0.41215778023991984 Spearman Correlation: 0.3731637827526827 Coefficient of Determination: 0.004892213011307378 RMSE: 0.2383089298691475 NRMSE: 0.1432644370448519 MAPE: 406.0826683258911 Pearson Correlation: 0.5233722237353936 Spearman Correlation: 0.4734221051604722 Coefficient of Determination: 0.007532651379761224 RMSE: 0.23406075912432214 NRMSE: 0.1667004437954548 MAPE: 1317.0824745894265 Predictor: RandomForests Pearson Correlation: 0.4679171257337744 Spearman Correlation: 0.40016447040719705 Coefficient of Determination: 0.2127242201433427 RMSE: 0.2119672178109137 NRMSE: 0.12742856152439777 MAPE: 315.08374736347946 Pearson Correlation: 0.5050841544101987 Spearman Correlation: 0.4767786498993165 Coefficient of Determination: 0.25320689683490005 RMSE: 0.20303487601183506 NRMSE: 0.14460349553574944 MAPE: 1138.0620619613712 Protein: ERBB2 x_train_column_count: 5 x_train columns: ['ERBB2', '2', '1/2', '3', '1/3'] Predictor: Zero
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 0.8313950484471637 Spearman Correlation: 0.6137315235983202 Coefficient of Determination: 0.6912177265824613 RMSE: 0.5663159380966224 NRMSE: 0.0964812406250102 MAPE: 621.7702578217554 Pearson Correlation: 0.8242031809517877 Spearman Correlation: 0.682811433030924 Coefficient of Determination: 0.666609095079564 RMSE: 0.5237252901549727 NRMSE: 0.09711205083533705 MAPE: 482.0662120312373 Predictor: ElasticNet Pearson Correlation: 0.8137781960861534 Spearman Correlation: 0.6137508967340191 Coefficient of Determination: 0.39995172265881973 RMSE: 0.7894519481624829 NRMSE: 0.1344961323683464 MAPE: 530.5213638291741 Pearson Correlation: 0.8249782537112411 Spearman Correlation: 0.7166081357916302 Coefficient of Determination: 0.3702822251348573 RMSE: 0.7197797897397892 NRMSE: 0.133465564572555 MAPE: 462.8896664478878 Predictor: RandomForests Pearson Correlation: 0.8350290813697612 Spearman Correlation: 0.6216057076940171 Coefficient of Determination: 0.6965211280520716 RMSE: 0.5614315762021708 NRMSE: 0.09564910918823293 MAPE: 467.4310756077953 Pearson Correlation: 0.8040149199599619 Spearman Correlation: 0.712575091635544 Coefficient of Determination: 0.6363330370305993 RMSE: 0.5469890053467115 NRMSE: 0.1014257380579847 MAPE: 341.96897482700155 Protein: ERBB3 x_train_column_count: 5 x_train columns: ['ERBB3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.4663017594908432 Spearman Correlation: 0.4461608353851102 Coefficient of Determination: 0.2174373309042561 RMSE: 0.40616539751138275 NRMSE: 0.1096123831825336 MAPE: 243.26969049653204 Pearson Correlation: 0.44839722053600783 Spearman Correlation: 0.47324952839944506 Coefficient of Determination: 0.1926531981608467 RMSE: 0.4182804339059611 NRMSE: 0.1678385151458819 MAPE: 254.16446935530894 Predictor: ElasticNet Pearson Correlation: 0.42266810621755413 Spearman Correlation: 0.4461608353851102 Coefficient of Determination: 0.08593928593936206 RMSE: 0.43896599675112247 NRMSE: 0.11846432348693214 MAPE: 208.445848966907 Pearson Correlation: 0.44185663823837446 Spearman Correlation: 0.47324952839944506 Coefficient of Determination: 0.08645686130181163 RMSE: 0.44494057868238684 NRMSE: 0.17853612074761926 MAPE: 232.6676565401185 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.4888755048912228 Spearman Correlation: 0.4625210017746683 Coefficient of Determination: 0.23742555962963663 RMSE: 0.4009447034394504 NRMSE: 0.10820346769490789 MAPE: 242.397265680779 Pearson Correlation: 0.4306135180238071 Spearman Correlation: 0.47175791537273415 Coefficient of Determination: 0.17674257303902818 RMSE: 0.4223819140865897 NRMSE: 0.16948426830002475 MAPE: 270.9861842046686 Fold: 2 Protein: RB1 x_train_column_count: 5 x_train columns: ['RB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.26456966080021543 Spearman Correlation: 0.3159384021100288 Coefficient of Determination: 0.06999710541594106 RMSE: 0.22666581757301948 NRMSE: 0.08289416968001005 MAPE: 219.69500773177398 Pearson Correlation: 0.09552637293500472 Spearman Correlation: 0.10588723051409618 Coefficient of Determination: -0.03316702170957608 RMSE: 0.24893227717260996 NRMSE: 0.14262027315638068 MAPE: 388.5294769187383 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: RandomForests Pearson Correlation: 0.35614812748472296 Spearman Correlation: 0.4067656823580468 Coefficient of Determination: 0.11704931686327302 RMSE: 0.22085747588364613 NRMSE: 0.08076999556891681 MAPE: 212.91843709848632 Pearson Correlation: 0.11262387941505292 Spearman Correlation: 0.13200550644686648 Coefficient of Determination: -0.01822745511322843 RMSE: 0.2471259465963582 NRMSE: 0.14158537578139255 MAPE: 371.2748514968058 Protein: CDH1 x_train_column_count: 5 x_train columns: ['CDH1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.7167064826735308 Spearman Correlation: 0.547751677945964 Coefficient of Determination: 0.513668182306264 RMSE: 0.781476506144797 NRMSE: 0.12536721041867283 MAPE: 343.8737939369222 Pearson Correlation: 0.669906699847619 Spearman Correlation: 0.6868207979709298 Coefficient of Determination: 0.41615113315261054 RMSE: 0.8791887262468172 NRMSE: 0.15613367541232767 MAPE: 181.01068689139558 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.6105061737270959 Spearman Correlation: 0.5479778011770806 Coefficient of Determination: 0.2263184310331241 RMSE: 0.985668119228926 NRMSE: 0.15812434735364178 MAPE: 473.30113167183407 Pearson Correlation: 0.655113043342397 Spearman Correlation: 0.6868207979709298 Coefficient of Determination: 0.18747023723750322 RMSE: 1.0371737789502031 NRMSE: 0.18418998027884978 MAPE: 146.21173186693304 Predictor: RandomForests Pearson Correlation: 0.7350304267267253 Spearman Correlation: 0.5613110030188662 Coefficient of Determination: 0.540044664604505 RMSE: 0.7599891897018013 NRMSE: 0.12192013952062264 MAPE: 218.35511995481855 Pearson Correlation: 0.6514395210092938 Spearman Correlation: 0.6950490242779388 Coefficient of Determination: 0.3838687429160702 RMSE: 0.903167935022137 NRMSE: 0.16039210353793942 MAPE: 213.09240930445145 Protein: CDH2 x_train_column_count: 5 x_train columns: ['CDH2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.1665773148522127 Spearman Correlation: 0.07854256675062343
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Coefficient of Determination: 0.027748001823373114 RMSE: 0.3629553627734806 NRMSE: 0.13151509630171776 MAPE: 528.3439862110217 Pearson Correlation: 0.11317933254150706 Spearman Correlation: 0.09953663057262709 Coefficient of Determination: 0.008686022195508292 RMSE: 0.38539561654172916 NRMSE: 0.20303535328328293 MAPE: 125.59302773862242 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: RandomForests Pearson Correlation: 0.19459124386792997 Spearman Correlation: 0.14527658773850916 Coefficient of Determination: 0.036529717015252094 RMSE: 0.3613124756022793 NRMSE: 0.13091980418953522 MAPE: 424.33177070736815 Pearson Correlation: 0.10471562157086545 Spearman Correlation: 0.0855059428777579 Coefficient of Determination: 0.0071018878634965255 RMSE: 0.3857034275539627 NRMSE: 0.20319751526678997 MAPE: 125.14009759181897 Protein: CDH3 x_train_column_count: 5 x_train columns: ['CDH3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.381223514355866 Spearman Correlation: 0.3541228260677942 Coefficient of Determination: 0.1453313678978374 RMSE: 0.19202129843558782 NRMSE: 0.14451491155884777 MAPE: 436.1674078203242 Pearson Correlation: 0.16170364658225225 Spearman Correlation: 0.2574968295776022 Coefficient of Determination: -0.17968918586073568 RMSE: 0.21497597593145573 NRMSE: 0.17689128275442753 MAPE: 726.5905364991684 Predictor: ElasticNet Pearson Correlation: 0.36688316181661 Spearman Correlation: 0.3550272027884919 Coefficient of Determination: 0.02556186371400626 RMSE: 0.20503483631065103 NRMSE: 0.1543088786364807 MAPE: 112.62109036636627 Pearson Correlation: 0.17671077578880104 Spearman Correlation: 0.25419471271095506 Coefficient of Determination: -0.13374845616053666 RMSE: 0.21074849620554895 NRMSE: 0.17341273447342137 MAPE: 243.5875055216441 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.4204718415225781 Spearman Correlation: 0.381566465141858 Coefficient of Determination: 0.17586554340406868 RMSE: 0.18855999399025514 NRMSE: 0.14190993955901884 MAPE: 407.9762976268253 Pearson Correlation: 0.1528224579371404 Spearman Correlation: 0.25482125674289846 Coefficient of Determination: -0.20420158161696267 RMSE: 0.2171979524042062 NRMSE: 0.1787196185338651 MAPE: 749.9943127972166 Protein: PTEN x_train_column_count: 5 x_train columns: ['PTEN', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.44318972931576367 Spearman Correlation: 0.451121115570204 Coefficient of Determination: 0.19641713617098 RMSE: 0.5591465227993034 NRMSE: 0.0874281170822146 MAPE: 413.42543811710976 Pearson Correlation: 0.33211366103104667 Spearman Correlation: 0.3185445322407571 Coefficient of Determination: -0.34649001011591274 RMSE: 0.593687233583485 NRMSE: 0.19911699543315167 MAPE: 874.9197407923721 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.42134560437019064 Spearman Correlation: 0.4509122731754614 Coefficient of Determination: 0.05444111332780588 RMSE: 0.6065332102338502 NRMSE: 0.09483749671391606 MAPE: 204.30462643681912 Pearson Correlation: 0.370883239303806 Spearman Correlation: 0.32171495463857186 Coefficient of Determination: 0.0637485877176075 RMSE: 0.49505378488632884 NRMSE: 0.16603628417169602 MAPE: 326.5182487905579 Predictor: RandomForests Pearson Correlation: 0.46386658448038803 Spearman Correlation: 0.47169340044799996 Coefficient of Determination: 0.21170000018707225 RMSE: 0.5538039617203611 NRMSE: 0.08659275454934892 MAPE: 387.7947714468296 Pearson Correlation: 0.3284110755369886 Spearman Correlation: 0.3189015377155911 Coefficient of Determination: 0.06659360136503978 RMSE: 0.49430104563962285 NRMSE: 0.16578382265884856 MAPE: 807.6057788047854 Protein: BRCA2
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['BRCA2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.06271548553170346 Spearman Correlation: 0.07353399408127455 Coefficient of Determination: 0.0039332321254773595 RMSE: 0.19493988888667502 NRMSE: 0.12558536890750524 MAPE: 121.69400405859922 Pearson Correlation: 0.0183923175881266 Spearman Correlation: -0.11329626377914352 Coefficient of Determination: -0.04408399998357182 RMSE: 0.19740007588567446 NRMSE: 0.13361948642867502 MAPE: 113.98373117217326 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: RandomForests Pearson Correlation: 0.3065859879492729 Spearman Correlation: 0.2519146540417206 Coefficient of Determination: 0.04415935545666705 RMSE: 0.19096300303904637 NRMSE: 0.12302335515480521 MAPE: 126.69248816875668 Pearson Correlation: 0.07896059153515289 Spearman Correlation: 0.05877387777856347 Coefficient of Determination: -0.011046221373264498 RMSE: 0.19425182166951882 NRMSE: 0.13148844311664884 MAPE: 123.9361936403578 Protein: CDKN2A
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CDKN2A', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.5978398883038558 Spearman Correlation: 0.476603374893099 Coefficient of Determination: 0.3574125320471665 RMSE: 0.5317476606800147 NRMSE: 0.1202097119204283 MAPE: 223.46420860320717 Pearson Correlation: 0.6944427589432202 Spearman Correlation: 0.5752024192761682 Coefficient of Determination: 0.46945667041756667 RMSE: 0.4905173571012287 NRMSE: 0.1325149549117216 MAPE: 212.25695309286326 Predictor: ElasticNet Pearson Correlation: 0.5732511666726422 Spearman Correlation: 0.4759909513511134 Coefficient of Determination: 0.16025425772046542 RMSE: 0.6078737192036463 NRMSE: 0.137419174681507 MAPE: 235.55007904453026 Pearson Correlation: 0.6623396757275588 Spearman Correlation: 0.5756072578285046 Coefficient of Determination: 0.17303359063472257 RMSE: 0.61240381141665 NRMSE: 0.16544300070689702 MAPE: 231.27194063556337 Predictor: RandomForests Pearson Correlation: 0.6040027516191304 Spearman Correlation: 0.4861296560239233 Coefficient of Determination: 0.36433447381499207 RMSE: 0.528875917565927 NRMSE: 0.11956051035739278 MAPE: 257.31980271784846 Pearson Correlation: 0.6768078158008014 Spearman Correlation: 0.569489990183919 Coefficient of Determination: 0.44303391666723235 RMSE: 0.5025836141073503 NRMSE: 0.13577469583621957 MAPE: 209.43106914074932 Protein: TP53
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['TP53', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 0.3797687638166014 Spearman Correlation: 0.3120800933459654 Coefficient of Determination: 0.1442243139707895 RMSE: 0.421210226805588 NRMSE: 0.11281913132599117 MAPE: 477.40990950836294 Pearson Correlation: 0.4086657060735872 Spearman Correlation: 0.2796458882060287 Coefficient of Determination: 0.1631565561487217 RMSE: 0.3745005226708005 NRMSE: 0.12333295658514752 MAPE: 1820.3053717159971 Predictor: ElasticNet Pearson Correlation: 0.3115721065415707 Spearman Correlation: 0.28717437803663004 Coefficient of Determination: 0.03339144891170964 RMSE: 0.4476558372297671 NRMSE: 0.11990246075526105 MAPE: 254.5337566529247 Pearson Correlation: 0.39984375020958235 Spearman Correlation: 0.3101990049751244 Coefficient of Determination: 0.05264728843342936 RMSE: 0.3984613209724695 NRMSE: 0.13122388308001628 MAPE: 975.3530036869894 Predictor: RandomForests Pearson Correlation: 0.4184031202222781 Spearman Correlation: 0.3552267477234314 Coefficient of Determination: 0.17439233728103443 RMSE: 0.4137193112705605 NRMSE: 0.1108127256650758 MAPE: 505.5339335076081 Pearson Correlation: 0.46793918082121677 Spearman Correlation: 0.28068144997753247 Coefficient of Determination: 0.21780722524703144 RMSE: 0.36206556235238085 NRMSE: 0.11923779428696882 MAPE: 1845.1105999300512 Protein: CTNNB1 x_train_column_count: 5 x_train columns: ['CTNNB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.16192288465692375 Spearman Correlation: 0.14060816807450946 Coefficient of Determination: 0.0262190205756192 RMSE: 0.71541627912053 NRMSE: 0.14071917370584777 MAPE: 622.7058350321054
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: -0.03492451460677596 Spearman Correlation: 0.10916008194322507 Coefficient of Determination: -14.552145018958 RMSE: 3.022920209972761 NRMSE: 0.7523257783461739 MAPE: 658.2739020267418 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: RandomForests Pearson Correlation: 0.2841720487354023 Spearman Correlation: 0.29091199686053093 Coefficient of Determination: 0.06884976897217243 RMSE: 0.6995810745496404 NRMSE: 0.13760445998222667 MAPE: 631.5635683552986 Pearson Correlation: 0.0711397534338752 Spearman Correlation: 0.14282184909213674 Coefficient of Determination: -0.1285956971281863 RMSE: 0.8143305550615784 NRMSE: 0.20266557702933685 MAPE: 489.1762361982494 Protein: CCNE1 x_train_column_count: 5 x_train columns: ['CCNE1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.8556361342330594 Spearman Correlation: 0.7037421206310505 Coefficient of Determination: 0.7321131942052943 RMSE: 0.2654122965292459 NRMSE: 0.06405200582311604 MAPE: 58.939578936434124 Pearson Correlation: 0.8420764727642883 Spearman Correlation: 0.752243683543069 Coefficient of Determination: 0.7046825077192866 RMSE: 0.22730278393445397 NRMSE: 0.12353479308825265 MAPE: 37.66288415784498 Predictor: ElasticNet Pearson Correlation: 0.8479583425434796 Spearman Correlation: 0.7061567494715154 Coefficient of Determination: 0.26106144577071444 RMSE: 0.44080807454910986 NRMSE: 0.10638030613922578 MAPE: 103.46678541764867 Pearson Correlation: 0.8317933104887405 Spearman Correlation: 0.7531411569602966 Coefficient of Determination: 0.2471085009450409 RMSE: 0.362932922338226 NRMSE: 0.1972472254404785 MAPE: 69.57551723282323 Predictor: RandomForests Pearson Correlation: 0.8575095771109752 Spearman Correlation: 0.710170393324273 Coefficient of Determination: 0.731498626310561 RMSE: 0.26571656764063023 NRMSE: 0.06412543563497122 MAPE: 67.92450709705875 Pearson Correlation: 0.8347305792258161 Spearman Correlation: 0.7370836679134409 Coefficient of Determination: 0.6934281121432458 RMSE: 0.2315934823465308 NRMSE: 0.12586670707260952 MAPE: 40.58980832475773 Protein: CCND1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CCND1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.46538459496056706 Spearman Correlation: 0.39484689323974637 Coefficient of Determination: 0.2165828212266111 RMSE: 0.2113143659616266 NRMSE: 0.12703608587225512 MAPE: 507.3617014658405 Pearson Correlation: 0.32770770870300897 Spearman Correlation: 0.3886206223783046 Coefficient of Determination: 0.09500903975684538 RMSE: 0.22396658228624372 NRMSE: 0.1732736447718046 MAPE: 333.1482822199375 Predictor: ElasticNet Pearson Correlation: 0.4580422277339426 Spearman Correlation: 0.3945270040292828 Coefficient of Determination: 0.0224549007344782 RMSE: 0.23604830118196116 NRMSE: 0.14190541245263444 MAPE: 621.9966419317939 Pearson Correlation: 0.3537029693476282 Spearman Correlation: 0.3886206223783046 Coefficient of Determination: 0.01396985092747205 RMSE: 0.2337793782590855 NRMSE: 0.1808653975514371 MAPE: 416.4716117994525 Predictor: RandomForests Pearson Correlation: 0.5008394330542719 Spearman Correlation: 0.4095456699463168 Coefficient of Determination: 0.24675893608299893 RMSE: 0.20720463779582826 NRMSE: 0.12456543614711153 MAPE: 491.2427450802543 Pearson Correlation: 0.3225095409332166 Spearman Correlation: 0.3839087800361473 Coefficient of Determination: 0.09369217172592081 RMSE: 0.22412947187967547 NRMSE: 0.17339966568644818 MAPE: 339.86681722580477 Protein: ERBB2 x_train_column_count: 5 x_train columns: ['ERBB2', '2', '1/2', '3', '1/3'] Predictor: Zero
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.8380442142933153 Spearman Correlation: 0.6629978079877736 Coefficient of Determination: 0.7023181051105007 RMSE: 0.5363318438947928 NRMSE: 0.09624963549966671 MAPE: 349.8906453146169 Pearson Correlation: 0.8191907396301089 Spearman Correlation: 0.5166032582187103 Coefficient of Determination: 0.6482854181023512 RMSE: 0.6269790054364633 NRMSE: 0.10681619255438325 MAPE: 1725.3612256592855 Predictor: ElasticNet Pearson Correlation: 0.8150200332932453 Spearman Correlation: 0.6630955260861322 Coefficient of Determination: 0.3820623825897894 RMSE: 0.7727334094602777 NRMSE: 0.13867405011580095 MAPE: 326.7431369277624 Pearson Correlation: 0.8316119196002757 Spearman Correlation: 0.5166032582187103 Coefficient of Determination: 0.3711121140862518 RMSE: 0.838386788566291 NRMSE: 0.14283298781305537 MAPE: 1303.8036405094376 Predictor: RandomForests Pearson Correlation: 0.8389629182616922 Spearman Correlation: 0.6674393366047144 Coefficient of Determination: 0.7023517759520006 RMSE: 0.5363015107514226 NRMSE: 0.09624419194074665 MAPE: 280.29122898726524 Pearson Correlation: 0.8161121853257634 Spearman Correlation: 0.5012523821949281 Coefficient of Determination: 0.6428254688684671 RMSE: 0.63182681426791 NRMSE: 0.10764209657527812 MAPE: 1420.7544425542162 Protein: ERBB3 x_train_column_count: 5 x_train columns: ['ERBB3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.4740917504547122 Spearman Correlation: 0.45750245249411897 Coefficient of Determination: 0.22476298784921311 RMSE: 0.39192872865438366 NRMSE: 0.1057703148735204 MAPE: 222.83463525119785 Pearson Correlation: 0.12419664603309853 Spearman Correlation: 0.40148765974051315 Coefficient of Determination: -0.3408541313603002 RMSE: 0.5995594500953363 NRMSE: 0.22127312622770837 MAPE: 363.63852899934136 Predictor: ElasticNet Pearson Correlation: 0.4334247617702558 Spearman Correlation: 0.4574811032948563 Coefficient of Determination: 0.08763146971723834 RMSE: 0.42518212458831306 NRMSE: 0.11474445200968111 MAPE: 202.14428979946493 Pearson Correlation: 0.40759882938597475 Spearman Correlation: 0.4416544727343674 Coefficient of Determination: 0.07912352280627322 RMSE: 0.4968693128807811 NRMSE: 0.18337435290238788 MAPE: 287.4508787027189 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.4937926972662044 Spearman Correlation: 0.47011878226411286 Coefficient of Determination: 0.24235048330361064 RMSE: 0.38745745765908807 NRMSE: 0.10456364716462097 MAPE: 216.39720242867085 Pearson Correlation: 0.4334367844462965 Spearman Correlation: 0.44593650227107995 Coefficient of Determination: 0.1860571517329479 RMSE: 0.4671307332863833 NRMSE: 0.17239904682493784 MAPE: 360.2060064779412 Fold: 3 Protein: RB1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['RB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.22341118109169825 Spearman Correlation: 0.27885225316817 Coefficient of Determination: 0.04991255583678744 RMSE: 0.23450028630431802 NRMSE: 0.08575932062036207 MAPE: 217.69264996634968 Pearson Correlation: 0.2618263491712086 Spearman Correlation: 0.2504245688848988 Coefficient of Determination: 0.04448830297030926 RMSE: 0.21667822492675465 NRMSE: 0.15203995742646662 MAPE: 193.01742044401695 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: RandomForests Pearson Correlation: 0.3151554072257596 Spearman Correlation: 0.35257933843613143 Coefficient of Determination: 0.09187356641078293 RMSE: 0.22926340938839693 NRMSE: 0.08384413742992866 MAPE: 273.6666140164905 Pearson Correlation: 0.2300590252443082 Spearman Correlation: 0.28681957460006946 Coefficient of Determination: 0.025303836965301807 RMSE: 0.2188426138644487 NRMSE: 0.15355867764882655 MAPE: 235.88853086302066 Protein: CDH1 x_train_column_count: 5 x_train columns: ['CDH1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.7054084487948983 Spearman Correlation: 0.6059974286980401 Coefficient of Determination: 0.4976010796312247 RMSE: 0.8326345503122424 NRMSE: 0.13258089715490626 MAPE: 409.30563913603396 Pearson Correlation: 0.7238954790874675 Spearman Correlation: 0.46526016533872 Coefficient of Determination: 0.5209053757576962 RMSE: 0.6517024698030861 NRMSE: 0.12812143077951602 MAPE: 212.34083940046435 Predictor: ElasticNet Pearson Correlation: 0.6209728367311027 Spearman Correlation: 0.6060433571893057 Coefficient of Determination: 0.24751579204348462 RMSE: 1.0190107704959348 NRMSE: 0.16225769410145133 MAPE: 558.1749810229986 Pearson Correlation: 0.6103995279647465 Spearman Correlation: 0.46526016533872 Coefficient of Determination: 0.21516577804634174 RMSE: 0.8341183661254153 NRMSE: 0.16398347936252416 MAPE: 253.4266263997235 Predictor: RandomForests Pearson Correlation: 0.7206538377514746 Spearman Correlation: 0.6176288088008253 Coefficient of Determination: 0.5189118076018645 RMSE: 0.8147838802182297 NRMSE: 0.12973852428556887 MAPE: 282.75676595496384 Pearson Correlation: 0.7353301371123111 Spearman Correlation: 0.46500928923410684 Coefficient of Determination: 0.538426650574287 RMSE: 0.63967456230514 NRMSE: 0.1257568046052648 MAPE: 186.00534358064274 Protein: CDH2 x_train_column_count: 5 x_train columns: ['CDH2', '2', '1/2', '3', '1/3']
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.16863499751485597 Spearman Correlation: 0.1403819801869414 Coefficient of Determination: 0.028437762386835375 RMSE: 0.3757780927746649 NRMSE: 0.13616134965383903 MAPE: 664.1602230734213 Pearson Correlation: 0.06804078615719009 Spearman Correlation: -0.15322136186236737 Coefficient of Determination: -0.008339570667402096 RMSE: 0.3333598431273873 NRMSE: 0.17564853580173 MAPE: 118.15733370205483 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: RandomForests Pearson Correlation: 0.23488691588865296 Spearman Correlation: 0.21192984652471675 Coefficient of Determination: 0.04968729370292935 RMSE: 0.3716459570602435 NRMSE: 0.1346640905356343 MAPE: 387.77882706972184 Pearson Correlation: -0.02543600523233715 Spearman Correlation: -0.1851350763201282 Coefficient of Determination: -0.04053330672582822 RMSE: 0.33863970008507494 NRMSE: 0.17843051198446422 MAPE: 642.2830860604364 Protein: CDH3 x_train_column_count: 5 x_train columns: ['CDH3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.3412366447272734 Spearman Correlation: 0.3375002393714362 Coefficient of Determination: 0.11644244770472745 RMSE: 0.19975526280960396 NRMSE: 0.14014372706516526 MAPE: 466.6624223753178 Pearson Correlation: 0.3028844804736831 Spearman Correlation: 0.3174278981034676 Coefficient of Determination: 0.08367107822885311 RMSE: 0.18027737106264277 NRMSE: 0.15680792841653934 MAPE: 184.79577139812594 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.3340250982083164 Spearman Correlation: 0.3386347347546788 Coefficient of Determination: 0.01601360367346849 RMSE: 0.21080230515527287 NRMSE: 0.14789407949940567 MAPE: 118.75448348570796 Pearson Correlation: 0.2810278467720501 Spearman Correlation: 0.31279442387062184 Coefficient of Determination: 0.011468125740541013 RMSE: 0.1872452708397764 NRMSE: 0.16286871088205868 MAPE: 101.45526328055416 Predictor: RandomForests Pearson Correlation: 0.38429063561532717 Spearman Correlation: 0.366929487494884 Coefficient of Determination: 0.14614884835263475 RMSE: 0.19636853167347101 NRMSE: 0.13776767390236222 MAPE: 480.79342950124743 Pearson Correlation: 0.27910731531306143 Spearman Correlation: 0.30860684283191253 Coefficient of Determination: 0.0655555461704449 RMSE: 0.1820506628174801 NRMSE: 0.15835036385874218 MAPE: 188.00773874257487 Protein: PTEN x_train_column_count: 5 x_train columns: ['PTEN', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 0.41523354380170935 Spearman Correlation: 0.4166727898233252 Coefficient of Determination: 0.17241889589812598 RMSE: 0.5724783852301967 NRMSE: 0.08951268629977276 MAPE: 568.5217466934592
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.3884113658258809 Spearman Correlation: 0.39060586790358987 Coefficient of Determination: 0.1473287386430452 RMSE: 0.4348839421630977 NRMSE: 0.10397454744969582 MAPE: 124.26270420342351 Predictor: ElasticNet Pearson Correlation: 0.4036908941458965 Spearman Correlation: 0.4168387026449609 Coefficient of Determination: 0.05643949511079971 RMSE: 0.6112778904986967 NRMSE: 0.09557937463821385 MAPE: 209.8227731290948 Pearson Correlation: 0.3915151441973773 Spearman Correlation: 0.39053105400316723 Coefficient of Determination: 0.005445734776924671 RMSE: 0.46967430476290195 NRMSE: 0.11229242690262085 MAPE: 90.96698273021113 Predictor: RandomForests Pearson Correlation: 0.4486189950913778 Spearman Correlation: 0.44022040396873025 Coefficient of Determination: 0.19704888442279767 RMSE: 0.5638951558658558 NRMSE: 0.08817061306635225 MAPE: 546.2219115894623 Pearson Correlation: 0.3687177757531359 Spearman Correlation: 0.405227077725146 Coefficient of Determination: 0.1312647338902646 RMSE: 0.43896135222360844 NRMSE: 0.10494939803557798 MAPE: 126.18039299878608 Protein: BRCA2 x_train_column_count: 5 x_train columns: ['BRCA2', '2', '1/2', '3', '1/3'] Predictor:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.07415007945049347 Spearman Correlation: 0.05073981092564874 Coefficient of Determination: 0.0054982342825145025 RMSE: 0.18952695858527993 NRMSE: 0.1277376854024209 MAPE: 130.36335389192868 Pearson Correlation: -0.06559514301217804 Spearman Correlation: -0.1357498223169865 Coefficient of Determination: -0.019057407927884906 RMSE: 0.21616218457498726 NRMSE: 0.14867850014443135 MAPE: 123.35989273732511 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: RandomForests Pearson Correlation: 0.2847852536520081 Spearman Correlation: 0.24810712888855369 Coefficient of Determination: 0.04356944145348551 RMSE: 0.18586385299339783 NRMSE: 0.1252688195841519 MAPE: 118.71205027999494 Pearson Correlation: -0.008597785420769612 Spearman Correlation: -0.1128019880749639 Coefficient of Determination: -0.012088332481777764 RMSE: 0.2154217773299026 NRMSE: 0.14816924067838874 MAPE: 157.49003513886964 Protein: CDKN2A x_train_column_count: 5 x_train columns: ['CDKN2A', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.6099154639264399 Spearman Correlation: 0.4778469678439099 Coefficient of Determination: 0.37199687313660446 RMSE: 0.5290411652028618 NRMSE: 0.12351540091587174 MAPE: 244.2577854627037 Pearson Correlation: 0.6421349083151465 Spearman Correlation: 0.5734759785034726 Coefficient of Determination: 0.41200090448031956 RMSE: 0.5034430184543686 NRMSE: 0.1554268217882648 MAPE: 143.48612774939417 Predictor: ElasticNet Pearson Correlation: 0.5809098107049998 Spearman Correlation: 0.4770131653521852 Coefficient of Determination: 0.16475853996832823 RMSE: 0.6101190496279291 NRMSE: 0.14244467912493675 MAPE: 252.74749574668988 Pearson Correlation: 0.6320966349319166 Spearman Correlation: 0.5740296013666005 Coefficient of Determination: 0.17177007838064995 RMSE: 0.5974993700546711 NRMSE: 0.18446462599322994 MAPE: 157.80196584155715 Predictor: RandomForests Pearson Correlation: 0.6245442433394057 Spearman Correlation: 0.4954056886157062 Coefficient of Determination: 0.3895099992678276 RMSE: 0.5216123202164166 NRMSE: 0.12178098622908493 MAPE: 264.10866907885946 Pearson Correlation: 0.6251797457998285 Spearman Correlation: 0.5733110855363031 Coefficient of Determination: 0.38811166296195954 RMSE: 0.5135681488886652 NRMSE: 0.15855273035369863 MAPE: 124.73179501297591 Protein: TP53 x_train_column_count: 5 x_train columns: ['TP53', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.40329770272772847 Spearman Correlation: 0.3174384277906827 Coefficient of Determination: 0.1626490370254634 RMSE: 0.41188419849171953 NRMSE: 0.09898682972644066 MAPE: 783.1031064158835 Pearson Correlation: 0.31152753044388554 Spearman Correlation: 0.26401077320166094 Coefficient of Determination: 0.08014365105810017 RMSE: 0.4128393064710735 NRMSE: 0.15394743854475104 MAPE: 471.2900398070351 Predictor: ElasticNet Pearson Correlation: 0.33996151585574436 Spearman Correlation: 0.29871023780362554 Coefficient of Determination: 0.047642195404715704 RMSE: 0.4392597818639625 NRMSE: 0.10556591729487202 MAPE: 368.22770948665595 Pearson Correlation: 0.291580578226529 Spearman Correlation: 0.2638162570605619 Coefficient of Determination: 0.026490237950775763 RMSE: 0.4247087319449903 NRMSE: 0.1583735375621307 MAPE: 305.55767658265427 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.45579562950668484 Spearman Correlation: 0.35162246446507417 Coefficient of Determination: 0.20647455101088552 RMSE: 0.4009606918750126 NRMSE: 0.09636161785027941 MAPE: 818.1588803801528 Pearson Correlation: 0.2984791130638284 Spearman Correlation: 0.26907455660028845 Coefficient of Determination: 0.0658446370334902 RMSE: 0.4160356917475398 NRMSE: 0.15513936799090863 MAPE: 471.9253068166904 Protein: CTNNB1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CTNNB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.09180277328269887 Spearman Correlation: 0.07938543515012382 Coefficient of Determination: 0.008427749182394861 RMSE: 0.7659492806020349 NRMSE: 0.15065878847404307 MAPE: 471.06395760585445 Pearson Correlation: 0.21069785937029992 Spearman Correlation: 0.2763101784311525 Coefficient of Determination: 0.025907495186717866 RMSE: 0.6049780025587603 NRMSE: 0.19777632565914552 MAPE: 1221.6581617521338 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: RandomForests Pearson Correlation: 0.28283871709746194 Spearman Correlation: 0.27248155031404964 Coefficient of Determination: 0.056911975463831976 RMSE: 0.7469885508843376 NRMSE: 0.14692929797095547 MAPE: 449.58995100093125 Pearson Correlation: 0.20590790949456775 Spearman Correlation: 0.1399556799237513 Coefficient of Determination: 0.026453487374958562 RMSE: 0.6048084295659103 NRMSE: 0.1977208897204584 MAPE: 1426.5538436896502 Protein: CCNE1 x_train_column_count: 5 x_train columns: ['CCNE1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.8618732246550969 Spearman Correlation: 0.7200980326711482 Coefficient of Determination: 0.7428254553773754 RMSE: 0.2649331251400104 NRMSE: 0.06393636729010556 MAPE: 53.381755672561106 Pearson Correlation: 0.8020248955481595 Spearman Correlation: 0.6491078442374594 Coefficient of Determination: 0.5630517886813535 RMSE: 0.2411988965724369 NRMSE: 0.10506551229360844 MAPE: 52.276027707926076 Predictor: ElasticNet Pearson Correlation: 0.85343331117316 Spearman Correlation: 0.724580992574438 Coefficient of Determination: 0.2608318312319956 RMSE: 0.4491525822485107 NRMSE: 0.1083940879524364 MAPE: 91.4253335011144 Pearson Correlation: 0.80519139726607 Spearman Correlation: 0.6712078704223245 Coefficient of Determination: 0.2834725432406753 RMSE: 0.30887072833212237 NRMSE: 0.1345431582228176 MAPE: 112.23276348630257 Predictor: RandomForests Pearson Correlation: 0.8618797464006703 Spearman Correlation: 0.7259152105398575 Coefficient of Determination: 0.7406857198164689 RMSE: 0.2660329862507928 NRMSE: 0.06420179700528339 MAPE: 55.867249428620354 Pearson Correlation: 0.7669135974351995 Spearman Correlation: 0.6683145532116774 Coefficient of Determination: 0.513208574705668 RMSE: 0.254584403169708 NRMSE: 0.11089619861903036 MAPE: 78.28155142037477 Protein: CCND1 x_train_column_count: 5 x_train columns: ['CCND1', '2', '1/2', '3', '1/3']
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.45316918033224657 Spearman Correlation: 0.40702588796834765 Coefficient of Determination: 0.20536230600299998 RMSE: 0.218092683508159 NRMSE: 0.1311110143608704 MAPE: 529.8981908225904 Pearson Correlation: 0.3811595071544301 Spearman Correlation: 0.3490592152021846 Coefficient of Determination: 0.1341019793211058 RMSE: 0.1951703268521737 NRMSE: 0.18493772265753242 MAPE: 233.45209029028004 Predictor: ElasticNet Pearson Correlation: 0.4499647693124255 Spearman Correlation: 0.40702588796834765 Coefficient of Determination: 0.02448103973501392 RMSE: 0.2416430855357613 NRMSE: 0.14526883501206028 MAPE: 614.9882194365566 Pearson Correlation: 0.37954750693540357 Spearman Correlation: 0.3490592152021846 Coefficient of Determination: 0.017296114717982092 RMSE: 0.20791783893973656 NRMSE: 0.19701689418450774 MAPE: 448.6808479154828 Predictor: RandomForests Pearson Correlation: 0.48701175981453737 Spearman Correlation: 0.43302356100040734 Coefficient of Determination: 0.2330006116710185 RMSE: 0.2142663758880709 NRMSE: 0.1288107488716445 MAPE: 532.082568823757 Pearson Correlation: 0.3682241478957792 Spearman Correlation: 0.3545397794492318 Coefficient of Determination: 0.12538407752351843 RMSE: 0.19615035827191662 NRMSE: 0.18586637191391944 MAPE: 242.12255902019984 Protein: ERBB2 x_train_column_count: 5 x_train columns: ['ERBB2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 0.8198895626736461 Spearman Correlation: 0.6175542476381123 Coefficient of Determination: 0.6722188949811827 RMSE: 0.5617783477738059 NRMSE: 0.09570818743271477 MAPE: 648.4065863261969 Pearson Correlation: 0.868403920618276 Spearman Correlation: 0.693151651706485 Coefficient of Determination: 0.7525507570074805 RMSE: 0.5305431088639548 NRMSE: 0.09570371398801408 MAPE: 204.89112712021972 Predictor: ElasticNet Pearson Correlation: 0.8074311834972404 Spearman Correlation: 0.6175542476381123 Coefficient of Determination: 0.3616801144011226 RMSE: 0.783956970738714 NRMSE: 0.13355997252648585 MAPE: 534.3427241686963 Pearson Correlation: 0.8481276764714775 Spearman Correlation: 0.693151651706485 Coefficient of Determination: 0.4126265205329376 RMSE: 0.8174002760561955 NRMSE: 0.14744936071437253 MAPE: 227.73902637042931 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.8199844751162091 Spearman Correlation: 0.6221157814302832 Coefficient of Determination: 0.6702049561787126 RMSE: 0.5635015323300866 NRMSE: 0.09600176028248235 MAPE: 549.6029276601963 Pearson Correlation: 0.8599440788792835 Spearman Correlation: 0.6851291397706071 Coefficient of Determination: 0.7371530099656668 RMSE: 0.5468007696802719 NRMSE: 0.0986364040840378 MAPE: 202.54669535151447 Protein: ERBB3 x_train_column_count: 5 x_train columns: ['ERBB3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.4782935091137416 Spearman Correlation: 0.44911353763243367 Coefficient of Determination: 0.22876468086033663 RMSE: 0.3960720729857494 NRMSE: 0.14361520774574196 MAPE: 256.9403714978713 Pearson Correlation: 0.41005101745493405 Spearman Correlation: 0.40870584421252143 Coefficient of Determination: 0.14744279698319596 RMSE: 0.45679650332047733 NRMSE: 0.12700257268936604 MAPE: 172.83822607432367 Predictor: ElasticNet Pearson Correlation: 0.43597302078049127 Spearman Correlation: 0.4548855783210745 Coefficient of Determination: 0.0931100939188072 RMSE: 0.42949493877776784 NRMSE: 0.15573429450183215 MAPE: 223.4100339258352 Pearson Correlation: 0.4100749509658727 Spearman Correlation: 0.4259180289031036 Coefficient of Determination: 0.06153017098753766 RMSE: 0.4792599789307826 NRMSE: 0.13324806531751793 MAPE: 148.63823082934508 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.4999772787130882 Spearman Correlation: 0.47145580278027005 Coefficient of Determination: 0.24936566604040078 RMSE: 0.39074639408774725 NRMSE: 0.14168412364895636 MAPE: 239.36369085083874 Pearson Correlation: 0.40621408558179806 Spearman Correlation: 0.4286900581558507 Coefficient of Determination: 0.1379264376414061 RMSE: 0.45933884084768656 NRMSE: 0.12770941568017977 MAPE: 166.28747621422403 Fold: 4 Protein: RB1 x_train_column_count: 5 x_train columns: ['RB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.23672978995260274 Spearman Correlation: 0.2608058238559904 Coefficient of Determination: 0.05604099345100333 RMSE: 0.2443617756592648 NRMSE: 0.08936577518258661 MAPE: 333.4051859808833 Pearson Correlation: 0.2281770589514388 Spearman Correlation: 0.3058467063180339 Coefficient of Determination: -0.0492688490027724 RMSE: 0.16889529687054064 NRMSE: 0.16182050441741141 MAPE: 108.11405462951747 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.3354716659774619 Spearman Correlation: 0.36872499080973353 Coefficient of Determination: 0.09970165657844221 RMSE: 0.23864367620422963 NRMSE: 0.08727460364402781 MAPE: 320.1667713812272 Pearson Correlation: 0.2489237660453198 Spearman Correlation: 0.34152871277647523 Coefficient of Determination: -0.03633114959068817 RMSE: 0.16785081043222436 NRMSE: 0.16081977008414552 MAPE: 112.5832654307591 Protein: CDH1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CDH1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 0.6938894815388059 Spearman Correlation: 0.6034862344952329 Coefficient of Determination: 0.48148261259019276 RMSE: 0.8057793542586442 NRMSE: 0.1283047282345537 MAPE: 432.93760107830155 Pearson Correlation: 0.767197437899883 Spearman Correlation: 0.449245003054901 Coefficient of Determination: 0.5474452837291944 RMSE: 0.7846944912277511 NRMSE: 0.14235595428826078 MAPE: 197.68456689482846 Predictor: ElasticNet Pearson Correlation: 0.6183935765499956 Spearman Correlation: 0.6035344748233071 Coefficient of Determination: 0.23534189775281122 RMSE: 0.9785164271640306 NRMSE: 0.15580975560715113 MAPE: 558.8366081520032 Pearson Correlation: 0.6160795877728432 Spearman Correlation: 0.44892080948640256 Coefficient of Determination: 0.1861594833814515 RMSE: 1.0522882226091215 NRMSE: 0.1909016767550382 MAPE: 308.6655797297002 Predictor: RandomForests Pearson Correlation: 0.7087465928671025 Spearman Correlation: 0.6151147498515491 Coefficient of Determination: 0.5020692188726259 RMSE: 0.7896214925151644 NRMSE: 0.12573190225075068 MAPE: 347.50739803543973 Pearson Correlation: 0.7565120663505035 Spearman Correlation: 0.44363902379888376 Coefficient of Determination: 0.5235914114602802 RMSE: 0.8051093072939526 NRMSE: 0.1460595238369349 MAPE: 167.38169848454703 Protein: CDH2 x_train_column_count: 5 x_train columns: ['CDH2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.1502704234339832 Spearman Correlation: 0.06113225339591067 Coefficient of Determination: 0.022581200159028758 RMSE: 0.3750558361202812 NRMSE: 0.13589964349600742 MAPE: 410.91836813723467 Pearson Correlation: -0.12321241034538007 Spearman Correlation: -0.04232222346912056 Coefficient of Determination: -0.15013546094514196 RMSE: 0.3574101244551504 NRMSE: 0.18437648283972513 MAPE: 144.41737937685767 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: RandomForests Pearson Correlation: 0.2008564671309549 Spearman Correlation: 0.19593615912826406 Coefficient of Determination: 0.03593060192254349 RMSE: 0.3724858097540588 NRMSE: 0.13496840704183594 MAPE: 884.4062250519597 Pearson Correlation: 0.14259578252810795 Spearman Correlation: -0.007490224344353753 Coefficient of Determination: -0.03554154486146155 RMSE: 0.3391377365722287 NRMSE: 0.1749503407681424 MAPE: 184.39127320784024 Protein: CDH3 x_train_column_count: 5 x_train columns: ['CDH3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.31956710222354967 Spearman Correlation: 0.3314474395404564 Coefficient of Determination: 0.10212313282355656 RMSE: 0.19511290251556376 NRMSE: 0.13905447960685588 MAPE:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
282.4972516118278 Pearson Correlation: 0.3870232252059443 Spearman Correlation: 0.318305714535094 Coefficient of Determination: 0.05400984761397132 RMSE: 0.20210678651866607 NRMSE: 0.17988392626757038 MAPE: 930.6272951443545 Predictor: ElasticNet Pearson Correlation: 0.3073687606063852 Spearman Correlation: 0.3309265441567785 Coefficient of Determination: 0.007210747778722326 RMSE: 0.20516634976657136 NRMSE: 0.14621944336742687 MAPE: 177.18666264660442 Pearson Correlation: 0.3917809104895306 Spearman Correlation: 0.3220264591827829 Coefficient of Determination: -0.09141823067873145 RMSE: 0.21708668710058326 NRMSE: 0.19321669642432243 MAPE: 229.33873907959787 Predictor: RandomForests Pearson Correlation: 0.3661650806172687 Spearman Correlation: 0.35439273671084043 Coefficient of Determination: 0.13219300783029397 RMSE: 0.19181791710406904 NRMSE: 0.13670618548688587 MAPE: 233.9258036788603 Pearson Correlation: 0.34102800684308754 Spearman Correlation: 0.30284737435388115 Coefficient of Determination: 0.0275007813258078 RMSE: 0.20491899613737138 NRMSE: 0.1823869164759344 MAPE: 815.7513317408602 Protein: PTEN x_train_column_count: 5 x_train columns: ['PTEN', '2', '1/2', '3', '1/3'] Predictor: Zero
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 0.41783481611868895 Spearman Correlation: 0.412522580384396 Coefficient of Determination: 0.17458593356093854 RMSE: 0.5103912318329918 NRMSE: 0.09872934691910241 MAPE: 308.47975827548373 Pearson Correlation: 0.4481340724511118 Spearman Correlation: 0.4688213069988404 Coefficient of Determination: 0.1674795539194912 RMSE: 0.6802783943487545 NRMSE: 0.1063682893204213 MAPE: 795.9890672274462 Predictor: ElasticNet Pearson Correlation: 0.40813028835182485 Spearman Correlation: 0.4125541754874478 Coefficient of Determination: 0.05291455095250164 RMSE: 0.5467160883126129 NRMSE: 0.1057559749908335 MAPE: 231.25210866830858 Pearson Correlation: 0.43562116819000696 Spearman Correlation: 0.4688213069988404 Coefficient of Determination: 0.038101407657849085 RMSE: 0.731229777167812 NRMSE: 0.11433504451064216 MAPE: 274.09481621563646 Predictor: RandomForests Pearson Correlation: 0.4481887736771443 Spearman Correlation: 0.4392262058963344 Coefficient of Determination: 0.19456454153978386 RMSE: 0.5041765528367012 NRMSE: 0.09752718833888524 MAPE: 267.33409144740926 Pearson Correlation: 0.436932308042635 Spearman Correlation: 0.47224052214471246 Coefficient of Determination: 0.1541849426458075 RMSE: 0.6856886013856142 NRMSE: 0.10721422897124762 MAPE: 505.4868401346051 Protein: BRCA2 x_train_column_count: 5 x_train columns: ['BRCA2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.05766283867636452 Spearman Correlation: -0.0017739495812242206 Coefficient of Determination: 0.0033250029642163392 RMSE: 0.19147813864137683 NRMSE: 0.12335521896690407 MAPE: 115.67286480722039 Pearson Correlation: -0.1437007545537364 Spearman Correlation: -0.14889213082457387 Coefficient of Determination: -0.012771439692392583 RMSE: 0.20943208563036012 NRMSE: 0.20346842606246915 MAPE: 150.5914004064318 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: RandomForests Pearson Correlation: 0.2977720556467046 Spearman Correlation: 0.2285493484559826 Coefficient of Determination: 0.04372053150075639 RMSE: 0.18755767091217215 NRMSE: 0.12082955123992409 MAPE: 118.67504461073011 Pearson Correlation: -0.019302508339210173 Spearman Correlation: -0.026935047913685145 Coefficient of Determination: -0.00923731427144081 RMSE: 0.20906635350900685 NRMSE: 0.20311310830459905 MAPE: 117.40974708408407 Protein: CDKN2A x_train_column_count: 5 x_train columns: ['CDKN2A', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.6216210677465476 Spearman Correlation: 0.5051536141417526 Coefficient of Determination: 0.3864127518663578 RMSE: 0.5279211654961086 NRMSE: 0.11934467401291025 MAPE: 260.94543720330245 Pearson Correlation: 0.6200826917661127 Spearman Correlation: 0.4882978590755496 Coefficient of Determination: 0.3494356606511779 RMSE: 0.5086874264956073 NRMSE: 0.153265268603678 MAPE: 113.95205134396878 Predictor: ElasticNet Pearson Correlation: 0.5895358836731258 Spearman Correlation: 0.5043429685491743 Coefficient of Determination: 0.17337349951526337 RMSE: 0.6127531796160584 NRMSE: 0.1385222515239196 MAPE: 226.11049123969136 Pearson Correlation: 0.6133609466568983 Spearman Correlation: 0.4884824000299256 Coefficient of Determination: 0.16346317556087375 RMSE: 0.5768307552610746 NRMSE: 0.17379655175085104 MAPE: 163.18082958605632 Predictor: RandomForests Pearson Correlation: 0.6315021316579708 Spearman Correlation: 0.5175085850702341 Coefficient of Determination: 0.39829848360987263 RMSE: 0.5227830094552866 NRMSE: 0.11818311505714627 MAPE: 286.8091880382585 Pearson Correlation: 0.6229795560883138 Spearman Correlation: 0.48235825210423916 Coefficient of Determination: 0.3606018325148975 RMSE: 0.5043030210309905 NRMSE: 0.1519442666559176 MAPE: 126.42484800288464 Protein: TP53 x_train_column_count: 5 x_train columns: ['TP53', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 0.37890027545042476 Spearman Correlation: 0.31425811700849776 Coefficient of Determination: 0.14356541873640782 RMSE: 0.416557155621024 NRMSE: 0.10010986676785005 MAPE: 812.2766090226908 Pearson Correlation: 0.4203552916847123 Spearman Correlation: 0.25459918452848546 Coefficient of Determination: 0.16920123175855573 RMSE: 0.3935890281638478 NRMSE: 0.12490131637593543 MAPE: 220.70711877124305 Predictor: ElasticNet Pearson Correlation: 0.32272594270274685 Spearman Correlation: 0.2833861559156332 Coefficient of Determination: 0.04102872741222763 RMSE: 0.4407885456544126 NRMSE: 0.10593332027262982 MAPE: 418.7215941552047 Pearson Correlation: 0.37366061816481966 Spearman Correlation: 0.31250015586229263 Coefficient of Determination: 0.041960526911389295 RMSE: 0.42265573180883476 NRMSE: 0.13412532743362363 MAPE: 186.0327032843156 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.4344928815774183 Spearman Correlation: 0.33659916441779625 Coefficient of Determination: 0.1871563068639337 RMSE: 0.40581773432610707 NRMSE: 0.09752889553619493 MAPE: 838.6185787542784 Pearson Correlation: 0.4382281627793782 Spearman Correlation: 0.25378423849339315 Coefficient of Determination: 0.18063167242045308 RMSE: 0.390872077950522 NRMSE: 0.12403912095408795 MAPE: 229.85658906022218 Protein: CTNNB1 x_train_column_count: 5 x_train columns: ['CTNNB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.13728989424949642 Spearman Correlation: 0.14088580922239943 Coefficient of Determination: 0.018848515063037974 RMSE: 0.7046902671296501 NRMSE: 0.17019859606068258 MAPE: 569.9597477221484 Pearson Correlation: -0.02371051470448489 Spearman Correlation: 0.04608286886370155 Coefficient of Determination: -0.16079832746093548 RMSE: 0.8645670431829828 NRMSE: 0.18176920426856083 MAPE: 1005.0253840314938 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: RandomForests Pearson Correlation: 0.2708212048810089 Spearman Correlation: 0.25332746502304954 Coefficient of Determination: 0.054911382401504394 RMSE: 0.6916183490541341 NRMSE: 0.16704143296641247 MAPE: 598.8024755186128 Pearson Correlation: 0.07267382808851819 Spearman Correlation: 0.13823949839064295 Coefficient of Determination: -0.133416084696651 RMSE: 0.8543089877843627 NRMSE: 0.17961251950726656 MAPE: 916.3275962998433 Protein: CCNE1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CCNE1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.8511582380344511 Spearman Correlation: 0.705305923631014 Coefficient of Determination: 0.7244703461739117 RMSE: 0.2649764385184651 NRMSE: 0.06394682011691606 MAPE: 51.21020207445027 Pearson Correlation: 0.8698548517165869 Spearman Correlation: 0.7263756405940224 Coefficient of Determination: 0.7423910505240658 RMSE: 0.2294602641463504 NRMSE: 0.09363431981814675 MAPE: 64.24405296990268 Predictor: ElasticNet Pearson Correlation: 0.8434781422112245 Spearman Correlation: 0.7105645817584747 Coefficient of Determination: 0.257819241171502 RMSE: 0.43488850725498557 NRMSE: 0.10495173570842135 MAPE: 88.79795707599372 Pearson Correlation: 0.8631788377757375 Spearman Correlation: 0.7249192633324606 Coefficient of Determination: 0.21925050675678104 RMSE: 0.39946880593603745 NRMSE: 0.16300857175223926 MAPE: 124.89664457793828 Predictor: RandomForests Pearson Correlation: 0.8555926698169538 Spearman Correlation: 0.7158559487574293 Coefficient of Determination: 0.7284905867638841 RMSE: 0.2630362054950025 NRMSE: 0.06347858326978364 MAPE: 55.54073362157029 Pearson Correlation: 0.8456838474620257 Spearman Correlation: 0.7088274541368929 Coefficient of Determination: 0.7022821756292825 RMSE: 0.24667744086523613 NRMSE: 0.10066001830785773 MAPE: 69.87901290517232 Protein: CCND1 x_train_column_count: 5 x_train columns: ['CCND1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 0.4161334590414111 Spearman Correlation: 0.37418253932078005 Coefficient of Determination: 0.1731670557337699
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
RMSE: 0.2185121492744843 NRMSE: 0.13960475158411234 MAPE: 513.4236650291364 Pearson Correlation: 0.5397991697957016 Spearman Correlation: 0.49853240065337473 Coefficient of Determination: 0.26957836937457924 RMSE: 0.19571576331076018 NRMSE: 0.12343325133120597 MAPE: 480.15949141994446 Predictor: ElasticNet Pearson Correlation: 0.40789241408956317 Spearman Correlation: 0.3728160125831736 Coefficient of Determination: 0.010090756302293502 RMSE: 0.23909164080325454 NRMSE: 0.1527527381475157 MAPE: 625.3140239171698 Pearson Correlation: 0.5709619771887237 Spearman Correlation: 0.49870696642102774 Coefficient of Determination: 0.0131698530072617 RMSE: 0.22748889293134297 NRMSE: 0.14347180432097817 MAPE: 483.0661027747142 Predictor: RandomForests Pearson Correlation: 0.4534102784452129 Spearman Correlation: 0.39949586103691814 Coefficient of Determination: 0.201714526488304 RMSE: 0.2147068081987384 NRMSE: 0.13717356550436258 MAPE: 504.68191690638884 Pearson Correlation: 0.5245326485699925 Spearman Correlation: 0.5018856606099847 Coefficient of Determination: 0.256893306003401 RMSE: 0.19740792327410847 NRMSE: 0.12450045615168295 MAPE: 425.381048022874 Protein: ERBB2 x_train_column_count: 5 x_train columns: ['ERBB2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 0.8375005352505241 Spearman Correlation: 0.6238378203261945 Coefficient of Determination: 0.7014071465449142 RMSE: 0.5359585689497665 NRMSE: 0.09130936316162094 MAPE: 588.3578601454656 Pearson Correlation: 0.8230925107655853 Spearman Correlation: 0.67230847305938 Coefficient of Determination: 0.6301290855608441 RMSE: 0.6304693277368325 NRMSE: 0.11352852806151773 MAPE: 275.86883193287986 Predictor: ElasticNet Pearson Correlation: 0.8204497610959258 Spearman Correlation: 0.6238582415521245 Coefficient of Determination: 0.3828294846705964 RMSE: 0.7705380673183805 NRMSE: 0.13127384147714202 MAPE: 467.0972446699177
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.8129101094824533 Spearman Correlation: 0.67230847305938 Coefficient of Determination: 0.3233609786578442 RMSE: 0.8527414867418283 NRMSE: 0.15355304619545293 MAPE: 135.1337773527326 Predictor: RandomForests Pearson Correlation: 0.8379118261616796 Spearman Correlation: 0.6242468308358713 Coefficient of Determination: 0.7012142796478228 RMSE: 0.5361316340087601 NRMSE: 0.09133884764276881 MAPE: 438.3459695332958 Pearson Correlation: 0.7900096819255299 Spearman Correlation: 0.6588300179349611 Coefficient of Determination: 0.5694557973034011 RMSE: 0.6802174131909045 NRMSE: 0.12248665919813168 MAPE: 216.95644678206537 Protein: ERBB3
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['ERBB3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.47210377684053967 Spearman Correlation: 0.47559620013365334 Coefficient of Determination: 0.2228819761071017 RMSE: 0.4211270474583208 NRMSE: 0.11515044267820945 MAPE: 248.99239570457516 Pearson Correlation: 0.39730127997215425 Spearman Correlation: 0.3203655905933989 Coefficient of Determination: 0.12644250223998843 RMSE: 0.35944576151404267 NRMSE: 0.1769213314731441 MAPE: 244.44045213273554 Predictor: ElasticNet Pearson Correlation: 0.4447058026032593 Spearman Correlation: 0.47559620013365334 Coefficient of Determination: 0.1010607805749335 RMSE: 0.452933881226064 NRMSE: 0.12384751167592167 MAPE: 224.09951226999206 Pearson Correlation: 0.3439918327249614 Spearman Correlation: 0.3203655905933989 Coefficient of Determination: 0.0822665216095011 RMSE: 0.36842229748151367 NRMSE: 0.1813396356108589 MAPE: 204.41619012064768 Predictor: RandomForests Pearson Correlation: 0.5017575914848379 Spearman Correlation: 0.4921605147487151 Coefficient of Determination: 0.2503000193256526 RMSE: 0.41363129949439237 NRMSE: 0.11310085051484675 MAPE: 238.28030543478857 Pearson Correlation: 0.4041323955475392 Spearman Correlation: 0.32032765592468015 Coefficient of Determination: 0.13857368373267354 RMSE: 0.3569412060034264 NRMSE: 0.1756885744256825 MAPE: 237.4408613379951 Fold: 5 Protein: RB1 x_train_column_count: 5 x_train columns: ['RB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
-0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.23251539731172302 Spearman Correlation: 0.2660986971682195 Coefficient of Determination: 0.05406340998702863 RMSE: 0.22749436107406498 NRMSE: 0.11238562864598635 MAPE: 215.02606503976352 Pearson Correlation: 0.19847655735776676 Spearman Correlation: 0.28314816892978717 Coefficient of Determination: -0.05242773264607825 RMSE: 0.24659003807595212 NRMSE: 0.12433194747995892 MAPE: 494.5354450126963 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: RandomForests Pearson Correlation: 0.3145025462633167 Spearman Correlation: 0.35956151450924767 Coefficient of Determination: 0.09132386711635232 RMSE: 0.22296884509436773 NRMSE: 0.11014995583227584 MAPE: 211.2056067728131 Pearson Correlation: 0.21123097353652284 Spearman Correlation: 0.23779555867019272 Coefficient of Determination: -0.04878630534383244 RMSE: 0.24616306445127475 NRMSE: 0.12411666521351812 MAPE: 529.0921149732138 Protein: CDH1 x_train_column_count: 5 x_train columns: ['CDH1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.7346057814160929 Spearman Correlation: 0.588836664067263 Coefficient of Determination: 0.5396456540899486 RMSE: 0.7640338298461663 NRMSE: 0.12165756342889816 MAPE: 198.91734043828498 Pearson Correlation: 0.6104422335376952 Spearman Correlation: 0.5418695993715633 Coefficient of Determination: 0.35599532322786753 RMSE: 0.9323014564950345 NRMSE: 0.18333984710134207 MAPE: 1047.646990214936 Predictor: ElasticNet Pearson Correlation: 0.6410559781541766 Spearman Correlation: 0.5889053256204806 Coefficient of Determination: 0.260454563516088 RMSE: 0.9683868774683754 NRMSE: 0.15419682135415677 MAPE: 232.45073158762892 Pearson Correlation: 0.5289586048209342 Spearman Correlation: 0.5418695993715633 Coefficient of Determination: 0.17514595102006558 RMSE: 1.0551164823930028 NRMSE: 0.20749178627617998 MAPE: 1309.3775489028978 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.7477132730675663 Spearman Correlation: 0.5990881223566048 Coefficient of Determination: 0.5587490298670774 RMSE: 0.7480132684931943 NRMSE: 0.11910659986834722 MAPE: 166.2197926101653 Pearson Correlation: 0.616013622220581 Spearman Correlation: 0.5412740364706119 Coefficient of Determination: 0.3622554955236724 RMSE: 0.9277590822668783 NRMSE: 0.1824465757343766 MAPE: 665.3142844496236 Protein: CDH2 x_train_column_count: 5 x_train columns: ['CDH2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.1562963984244914 Spearman Correlation: 0.10422862710641098 Coefficient of Determination: 0.024428564160467237 RMSE: 0.35472269145804775 NRMSE: 0.1742167336859917 MAPE: 407.28508666459834
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.1196392646413779 Spearman Correlation: -0.0009576191194649766 Coefficient of Determination: -0.022564858448568703 RMSE: 0.4217711289773383 NRMSE: 0.15772156721849498 MAPE: 1030.3947983670494 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: RandomForests Pearson Correlation: 0.2225471452913145 Spearman Correlation: 0.23310971157694335 Coefficient of Determination: 0.04505088005103708 RMSE: 0.3509534769848271 NRMSE: 0.17236554048662986 MAPE: 516.4084618816934 Pearson Correlation: 0.02613563430060784 Spearman Correlation: 0.01272366311076386 Coefficient of Determination: -0.02965335260008506 RMSE: 0.42323047837424443 NRMSE: 0.15826729180272028 MAPE: 421.1178441241013 Protein: CDH3 x_train_column_count: 5 x_train columns: ['CDH3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.33575530598845327 Spearman Correlation: 0.3409674231940851 Coefficient of Determination: 0.11273162549939975 RMSE: 0.19193891457581458 NRMSE: 0.1346599557836719 MAPE: 471.0152265747241 Pearson Correlation: 0.32786195231513054 Spearman Correlation: 0.294564770134291 Coefficient of Determination: 0.10477517244399259 RMSE: 0.21136542780298764 NRMSE: 0.19069589928002567 MAPE: 141.0745509368841 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.3258282023710955 Spearman Correlation: 0.34098087037844793 Coefficient of Determination: 0.01066037207477799 RMSE: 0.2026787588263212 NRMSE: 0.142194785055229 MAPE: 147.33149646131199 Pearson Correlation: 0.3154852689777345 Spearman Correlation: 0.2942804773126847 Coefficient of Determination: 0.0027564211011789075 RMSE: 0.22308404892100664 NRMSE: 0.20126855070959376 MAPE: 104.65656045689937 Predictor: RandomForests Pearson Correlation: 0.36965505977322854 Spearman Correlation: 0.37023702110479534 Coefficient of Determination: 0.1352943984872248 RMSE: 0.18948274589968064 NRMSE: 0.1329367639751927 MAPE: 428.8762610239707 Pearson Correlation: 0.33392383751857757 Spearman Correlation: 0.2896321859679133 Coefficient of Determination: 0.1080813307623334 RMSE: 0.21097476953916952 NRMSE: 0.190343443678822 MAPE: 147.6576392773054 Protein: PTEN x_train_column_count: 5 x_train columns: ['PTEN', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 0.41419034729567816 Spearman Correlation: 0.42205204877097163 Coefficient of Determination: 0.1715536437929145 RMSE: 0.5179233715267973 NRMSE: 0.08098246759859234 MAPE: 521.662957077445 Pearson Correlation: 0.3977104304137486 Spearman Correlation: 0.41073080711729576 Coefficient of Determination: 0.15442144860620044 RMSE: 0.6636458986295501 NRMSE: 0.12837470957705627 MAPE: 346.93335180343234 Predictor: ElasticNet Pearson Correlation: 0.395141470500772 Spearman Correlation: 0.4204847775371454 Coefficient of Determination: 0.04178729801442804 RMSE: 0.5570116452424712 NRMSE: 0.08709430775427585 MAPE: 238.23294248027466 Pearson Correlation: 0.4387088468200321 Spearman Correlation: 0.428546490604621 Coefficient of Determination: 0.04049959704870998 RMSE: 0.7069391222858491 NRMSE: 0.13674928858825616 MAPE: 359.7838767975489 Predictor: RandomForests Pearson Correlation: 0.4424713683162719 Spearman Correlation: 0.4429013674143712 Coefficient of Determination: 0.19271961505571344 RMSE: 0.5112643528819989 NRMSE: 0.07994126383894909 MAPE: 489.48198787226653 Pearson Correlation: 0.4124809121288077 Spearman Correlation: 0.4376523846678659 Coefficient of Determination: 0.1632524121174317 RMSE: 0.6601713457348014 NRMSE: 0.12770259705485945 MAPE: 405.61580355046533 Protein: BRCA2
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['BRCA2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.0664858857428476 Spearman Correlation: 0.055857605631882086 Coefficient of Determination: 0.004420373003011013 RMSE: 0.20002463800911835 NRMSE: 0.1288610971229624 MAPE: 116.70156561830309 Pearson Correlation: -0.08482152658591711 Spearman Correlation: -0.029434282222970364 Coefficient of Determination: -0.11077815612077613 RMSE: 0.17504542173508145 NRMSE: 0.22892228043559987 MAPE: 103.80981355385295 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: RandomForests Pearson Correlation: 0.2808683030346905 Spearman Correlation: 0.22741927753543684 Coefficient of Determination: 0.04207463164836134 RMSE: 0.1962055690044515 NRMSE: 0.126400753103206 MAPE: 124.0222781618915 Pearson Correlation: -0.08204526804249637 Spearman Correlation: -0.009163349322339706 Coefficient of Determination: -0.11708091660027953 RMSE: 0.17554133927994822 NRMSE: 0.2295708353886722 MAPE: 121.69192882868818 Protein: CDKN2A x_train_column_count: 5 x_train columns: ['CDKN2A', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 0.6724120619632933 Spearman Correlation: 0.5433148248962784 Coefficient of Determination: 0.4521379810737276 RMSE: 0.5030890418272231 NRMSE: 0.12810701072731104 MAPE: 240.49290920196214 Pearson Correlation: 0.38387851300116277 Spearman Correlation: 0.3112183443683837 Coefficient of Determination: -0.012628332029724909 RMSE: 0.609763541058548 NRMSE: 0.15343437282870287 MAPE: 361.26120096339207 Predictor: ElasticNet Pearson Correlation: 0.647540260599158 Spearman Correlation: 0.543492990453 Coefficient of Determination: 0.20377559341991136 RMSE: 0.606494691363044 NRMSE: 0.15443831105982633 MAPE: 213.7348727842343 Pearson Correlation: 0.3614252688105046 Spearman Correlation: 0.30912355515654816 Coefficient of Determination: 0.10638813839116357 RMSE: 0.5728103793773912 NRMSE: 0.14413587463259384 MAPE: 271.90119012198517 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.6804985222571751 Spearman Correlation: 0.5578792484186119 Coefficient of Determination: 0.4625852388380224 RMSE: 0.4982692159571973 NRMSE: 0.12687968627159923 MAPE: 263.8935646704191 Pearson Correlation: 0.3799901370327922 Spearman Correlation: 0.3102182095928762 Coefficient of Determination: -0.06055211708875974 RMSE: 0.6240256251250411 NRMSE: 0.15702313105484036 MAPE: 482.3157360920266 Protein: TP53 x_train_column_count: 5 x_train columns: ['TP53', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.3811936407046744 Spearman Correlation: 0.28722942502807625 Coefficient of Determination: 0.1453085917136845 RMSE: 0.39179454129592334 NRMSE: 0.09964509303286537 MAPE: 815.9724627234912 Pearson Correlation: 0.41797318597764394 Spearman Correlation: 0.4012693425105052 Coefficient of Determination: 0.15298201451082638 RMSE: 0.48607147889061714 NRMSE: 0.13019190542135187 MAPE: 172.04193269947132 Predictor: ElasticNet Pearson Correlation: 0.33235608512914344 Spearman Correlation: 0.28111369193441366 Coefficient of Determination: 0.04273876806886523 RMSE: 0.4146378530697756 NRMSE: 0.1054548317784724 MAPE: 458.4587785515596 Pearson Correlation: 0.334646621927356 Spearman Correlation: 0.3358321176074515 Coefficient of Determination: 0.030337639378894 RMSE: 0.5200727414218231 NRMSE: 0.1392989798906718 MAPE: 143.44560509760208 Predictor: RandomForests Pearson Correlation: 0.4314814786759326 Spearman Correlation: 0.34643046916493536 Coefficient of Determination: 0.18526419297122765 RMSE: 0.38252701679008905 NRMSE: 0.0972880838246367 MAPE: 844.93342651358 Pearson Correlation: 0.43923064667351636 Spearman Correlation: 0.307609706668647 Coefficient of Determination: 0.17124734532602126 RMSE: 0.48080202597385313 NRMSE: 0.12878050782746836 MAPE: 184.65594885123437 Protein: CTNNB1 x_train_column_count: 5 x_train columns: ['CTNNB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.07375762462928696 Spearman Correlation: 0.08335278005616814 Coefficient of Determination: 0.005440187190954737 RMSE: 0.7539216514108543 NRMSE: 0.14829300775193832 MAPE: 692.6443489776888 Pearson Correlation: 0.27006028254205044 Spearman Correlation: 0.24520754622875596 Coefficient of Determination: 0.03927046916250765 RMSE: 0.664218500292382 NRMSE: 0.21272759017687798 MAPE: 273.0201786274598 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: RandomForests Pearson Correlation: 0.2709132651209278 Spearman Correlation: 0.26370850559812414 Coefficient of Determination: 0.053288494500083106 RMSE: 0.7355625165488577 NRMSE: 0.14468184825902003 MAPE: 720.5866044879414 Pearson Correlation: 0.22578045319806445 Spearman Correlation: 0.2610385476917296 Coefficient of Determination: 0.04094858945371527 RMSE: 0.6636381466799675 NRMSE: 0.21254172178362327 MAPE: 272.38990168301905 Protein: CCNE1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CCNE1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.8540343263110172 Spearman Correlation: 0.7126576306723429 Coefficient of Determination: 0.7293746305175126 RMSE: 0.23346964098675 NRMSE: 0.08315926660258237 MAPE: 51.64096396679383 Pearson Correlation: 0.6292283151735336 Spearman Correlation: 0.7178967318794499 Coefficient of Determination: -2.1394722155769568 RMSE: 1.1483326986365991 NRMSE: 0.277127373756932 MAPE: 78.73367218042169 Predictor: ElasticNet Pearson Correlation: 0.8336835472730431 Spearman Correlation: 0.7126097756485593 Coefficient of Determination: 0.18548141536614215 RMSE: 0.4050388311730337 NRMSE: 0.14427028714978937 MAPE: 99.98912051547728 Pearson Correlation: 0.8705431662436123 Spearman Correlation: 0.719053853539321 Coefficient of Determination: 0.1909916784729767 RMSE: 0.5829293254646225 NRMSE: 0.14067845777074173 MAPE: 106.6225741373583 Predictor: RandomForests Pearson Correlation: 0.855650632891228 Spearman Correlation: 0.7114928849558277 Coefficient of Determination: 0.730734281419386 RMSE: 0.2328824142183907 NRMSE: 0.08295010301634576 MAPE: 56.5080176765545 Pearson Correlation: 0.8005340807679645 Spearman Correlation: 0.7307358786224182 Coefficient of Determination: 0.6136504949478718 RMSE: 0.4028372194679773 NRMSE: 0.09721679162776681 MAPE: 78.43246041847577 Protein: CCND1 x_train_column_count: 5 x_train columns: ['CCND1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.47086919566599467 Spearman Correlation: 0.4273832215129977 Coefficient of Determination: 0.22171779942714065 RMSE: 0.2008059693134521 NRMSE: 0.1264776084056309 MAPE: 603.549345724347 Pearson Correlation: 0.2998031004370001 Spearman Correlation: 0.2756817416676019 Coefficient of Determination: 0.08283339702431447 RMSE: 0.2642826123173393 NRMSE: 0.168846943124506 MAPE: 249.93160728455823 Predictor: ElasticNet Pearson Correlation: 0.46157293967981494 Spearman Correlation: 0.42726285187649277 Coefficient of Determination: 0.018230293103149497 RMSE: 0.2255344471455676 NRMSE: 0.14205283630553237 MAPE: 682.1671796251151 Pearson Correlation: 0.36596695910150095 Spearman Correlation: 0.2762503273108144 Coefficient of Determination: 0.008820997455625257 RMSE: 0.27473913176462966 NRMSE: 0.17552748608159213 MAPE: 267.1814751000642 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.4910407652661457 Spearman Correlation: 0.4512173853537595 Coefficient of Determination: 0.23794654241381163 RMSE: 0.19870133669976142 NRMSE: 0.12515200588264727 MAPE: 544.398322519066 Pearson Correlation: 0.3914267081554952 Spearman Correlation: 0.29422489289803727 Coefficient of Determination: 0.1502358369927379 RMSE: 0.25438627776972494 NRMSE: 0.16252429547905403 MAPE: 251.6982563544654 Protein: ERBB2 x_train_column_count: 5 x_train columns: ['ERBB2', '2', '1/2', '3', '1/3'] Predictor:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.8381675314420464 Spearman Correlation: 0.6442141580898807 Coefficient of Determination: 0.7025248107636537 RMSE: 0.5606409704503873 NRMSE: 0.09551441648642815 MAPE: 618.2987185717307 Pearson Correlation: 0.7951021970292319 Spearman Correlation: 0.5872666741480568 Coefficient of Determination: 0.6304728392604263 RMSE: 0.527476274494531 NRMSE: 0.11671120134849675 MAPE: 384.3114579163198 Predictor: ElasticNet Pearson Correlation: 0.8244043707044826 Spearman Correlation: 0.6442627066647334 Coefficient of Determination: 0.41396712612256703 RMSE: 0.7869016329200228 NRMSE: 0.13406164419306316 MAPE: 526.6214925730774 Pearson Correlation: 0.7621953897636515 Spearman Correlation: 0.5872666741480568 Coefficient of Determination: 0.3462954124498966 RMSE: 0.701569199043361 NRMSE: 0.15523159620386348 MAPE: 391.0033414855023 Predictor: RandomForests Pearson Correlation: 0.8379861452033743 Spearman Correlation: 0.6476501506375566 Coefficient of Determination: 0.7006763907536449 RMSE: 0.5623800989471744 NRMSE: 0.09581070564887038 MAPE: 556.9767645322418 Pearson Correlation: 0.7749886498442887 Spearman Correlation: 0.580392527783357 Coefficient of Determination: 0.5947357683413012 RMSE: 0.5523939139330684 NRMSE: 0.12222456332184277 MAPE: 295.794727890533 Protein: ERBB3
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['ERBB3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.4343377729326527 Spearman Correlation: 0.41142820549776254 Coefficient of Determination: 0.18864930099609667 RMSE: 0.4223709076592538 NRMSE: 0.11398578524701422 MAPE: 255.26339721781466 Pearson Correlation: 0.5715554440165691 Spearman Correlation: 0.5619845633985462 Coefficient of Determination: 0.302013820329453 RMSE: 0.3483594920103516 NRMSE: 0.16854690832882643 MAPE: 214.2327961174638 Predictor: ElasticNet Pearson Correlation: 0.39790997326064714 Spearman Correlation: 0.41142820549776254 Coefficient of Determination: 0.07780938526364778 RMSE: 0.4502980213335357 NRMSE: 0.1215225116742372 MAPE: 235.51678574472703 Pearson Correlation: 0.5411012796375061 Spearman Correlation: 0.5619845633985462 Coefficient of Determination: 0.06914387109242692 RMSE: 0.4022958181144307 NRMSE: 0.1946429419376588 MAPE: 223.34904834554857 Predictor: RandomForests Pearson Correlation: 0.46247361973981643 Spearman Correlation: 0.42563267771628494 Coefficient of Determination: 0.21289293377250285 RMSE: 0.41601270604680346 NRMSE: 0.1122698891225144 MAPE: 251.7081601814871 Pearson Correlation: 0.5455346016104494 Spearman Correlation: 0.559355485434222 Coefficient of Determination: 0.26915297963017726 RMSE: 0.35646547824651587 NRMSE: 0.17246883079798914 MAPE: 218.3854165683859
TMM
scenario = Scenario.selfmRNA_Polynomial
normalizeTechnique = NormalizeTechnique.TMM
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12.2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 6.676054 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SH-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SJ-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SK-01 | 6.676054 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SQ-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 5 x_train columns: ['RB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4586671617244917e-06 RMSE: 0.22410209624831526 NRMSE: 0.08487108360095257 MAPE: 241.53718297565408 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03536434267028454 RMSE: 0.28538241670885023 NRMSE: 0.14098319692369454 MAPE: 138.84023518029005 Protein: CDH1 x_train_column_count: 5 x_train columns: ['CDH1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.620371981620906e-07 RMSE: 1.1284316492288855 NRMSE: 0.18967469269138984 MAPE: 492.645061276289 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.5685973011002616e-05 RMSE: 1.1603202144047338 NRMSE: 0.18793045486131543 MAPE: 303.91159481027046 Protein: CDH2
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CDH2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: -0.0017152181106117274 Spearman Correlation: -0.0044981752298557985 Coefficient of Determination: -0.006098685165267126 RMSE: 0.37232464117186015 NRMSE: 0.13754803192316592 MAPE: 1190.4340319858425 Pearson Correlation: 0.07006050188511184 Spearman Correlation: -0.09621783777476263 Coefficient of Determination: 0.0044728231393116324 RMSE: 0.3742751386756058 NRMSE: 0.19315432661175921 MAPE: 107.50929064789956 Predictor: ElasticNet Pearson Correlation: 0.0021369891684560093 Spearman Correlation: 0.017615519581153163 Coefficient of Determination: 3.946640237284527e-06 RMSE: 0.37119373013585644 NRMSE: 0.13713023903469929 MAPE: 475.4708675681981 Pearson Correlation: -0.07468445577572304 Spearman Correlation: -0.05435078876471117 Coefficient of Determination: -0.00048230128357973356 RMSE: 0.3752054386756509 NRMSE: 0.19363443189123752 MAPE: 105.18130562997531 Predictor: RandomForests Pearson Correlation: 0.002136989168455994 Spearman Correlation: 0.017615519581153163 Coefficient of Determination: -3.418287103240658e-05 RMSE: 0.37120080681408685 NRMSE: 0.13713285337459385 MAPE: 554.0742535696029 Pearson Correlation: -0.07468445577572307 Spearman Correlation: -0.05435078876471117 Coefficient of Determination: -0.0015171950953063451 RMSE: 0.3753994438193196 NRMSE: 0.19373455324318503 MAPE: 104.64344861322338 Protein: CDH3 x_train_column_count:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
5 x_train columns: ['CDH3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.033276753183676816 Spearman Correlation: 0.03738257547501164 Coefficient of Determination: 0.0011040695693752545 RMSE: 0.20868447608717117 NRMSE: 0.14640825902731322 MAPE: 119.1719198762536 Pearson Correlation: 0.0937957731729239 Spearman Correlation: -0.02316523595830849 Coefficient of Determination: 0.004762008315469024 RMSE: 0.20409164003972496 NRMSE: 0.15621131108045477 MAPE: 109.64015184816222 Predictor: ElasticNet Pearson Correlation: 0.033274218384804544 Spearman Correlation: 0.03614715515223192 Coefficient of Determination: 0.0010980403834397467 RMSE: 0.20868510588031142 NRMSE: 0.14640870087578675 MAPE: 120.56826741937398 Pearson Correlation: 0.09403583475407698 Spearman Correlation: 0.12192115267996365 Coefficient of Determination: 0.004308519059795457 RMSE: 0.20413813285144908 NRMSE: 0.15624689658054594 MAPE: 110.66203036178712 Predictor: RandomForests Pearson Correlation: 0.033274218384804516 Spearman Correlation: 0.03614715515223192 Coefficient of Determination: 0.0010884817975662653 RMSE: 0.20868610434152873 NRMSE: 0.14640940137335742 MAPE: 125.6606466015733 Pearson Correlation: 0.094035834754077 Spearman Correlation: 0.12192115267996365 Coefficient of Determination: 0.004470106776378935 RMSE: 0.20412156770360806 NRMSE: 0.15623421765130618 MAPE: 114.0301428982097 Protein: PTEN x_train_column_count: 5 x_train columns: ['PTEN', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.4582305871018 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389227 RMSE: 0.4987799054891191 NRMSE: 0.16438596845597492 MAPE: 165.12440096809613 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.084012675889312e-05 RMSE: 0.6264775189448863 NRMSE: 0.09795598763894713 MAPE: 362.9024059037294 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00931343877205526 RMSE: 0.4989738155072401 NRMSE: 0.16444987657611235 MAPE: 166.61441984426253 Protein: BRCA2 x_train_column_count: 5 x_train columns: ['BRCA2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: -0.0013582759692855773 Spearman Correlation: -0.0045127773595330205 Coefficient of Determination: -0.008753828820942111 RMSE: 0.19847426966190485 NRMSE: 0.1283908437128232 MAPE: 116.15992065563181 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0008389360354734698 RMSE: 0.18481214089522965 NRMSE: 0.1849601089824156 MAPE: 105.32264254497545 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: RandomForests Pearson Correlation: -0.0013582759692855667 Spearman Correlation: -0.0045127773595330205 Coefficient of Determination: -5.103360456315542e-05 RMSE: 0.1976162691945358 NRMSE: 0.12783581255387666 MAPE: 121.64943148020942 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0044694795588478 RMSE: 0.18514704050472214 NRMSE: 0.18529527672610305 MAPE: 103.89824617718904 Protein: CDKN2A
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CDKN2A', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 0.12205587192740311 Spearman Correlation: 0.09815289996372449 Coefficient of Determination: 0.014897635871958692 RMSE: 0.6379093075460354 NRMSE: 0.14420917995841195 MAPE: 212.98747776068004 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00895833232325316 RMSE: 0.7502027765536694 NRMSE: 0.202593242385544 MAPE: 452.9737697258833 Predictor: ElasticNet Pearson Correlation: 0.12205587192740294 Spearman Correlation: 0.09815289996372449 Coefficient of Determination: 0.014895861798436938 RMSE: 0.6379098819520787 NRMSE: 0.14420930981170535 MAPE: 212.922358562182 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008974602514238095 RMSE: 0.7502088253134912 NRMSE: 0.20259487586105623 MAPE: 452.8288939553578 Predictor: RandomForests Pearson Correlation: 0.12205587192740315 Spearman Correlation: 0.09815289996372449 Coefficient of Determination: 0.014736514250158206 RMSE: 0.6379614730790857 NRMSE: 0.1442209727770059 MAPE: 212.39752380050172 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009104287408230993 RMSE: 0.750257036450676 NRMSE: 0.20260789534179746 MAPE: 451.6787954130565 Protein: TP53 x_train_column_count: 5 x_train columns: ['TP53', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1903553747139028e-06 RMSE: 0.452819839726163 NRMSE: 0.1088247632122478 MAPE: 386.5884091131444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002297937310716147 RMSE: 0.4211206095598197 NRMSE: 0.15143320851516406 MAPE: 447.70899049367625 Protein: CTNNB1 x_train_column_count: 5 x_train columns: ['CTNNB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.220446049250313e-16 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845058 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01663961166325656 RMSE: 0.7571798135162975 NRMSE: 0.18785784089621832 MAPE: 326.3792792664174 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4879440155768364e-05 RMSE: 0.7372406509033639 NRMSE: 0.14858630124823427 MAPE: 660.6430832277092 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01763093169040486 RMSE: 0.7575488846283525 NRMSE: 0.1879494081844769 MAPE: 324.6682321626286 Protein: CCNE1 x_train_column_count: 5 x_train columns: ['CCNE1', '2', '1/2', '3', '1/3'] Predictor: Zero
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.05141357925182305 Spearman Correlation: 0.03701975440193716 Coefficient of Determination: -0.00160951516668284 RMSE: 0.4840602418694976 NRMSE: 0.11681836085370505 MAPE: 116.50314122015261 Pearson Correlation: 0.13471343158616772 Spearman Correlation: 0.06675573372931909 Coefficient of Determination: 0.013603894665519478 RMSE: 0.5333745926825186 NRMSE: 0.18998204547908054 MAPE: 83.58872071534678 Predictor: ElasticNet Pearson Correlation: 0.051926874367685345 Spearman Correlation: 0.08469515587880291 Coefficient of Determination: 0.0026934938892315685 RMSE: 0.48301933845770506 NRMSE: 0.11656715941253108 MAPE: 119.58503054823646 Pearson Correlation: 0.1359916977433942 Spearman Correlation: 0.14852213144650117 Coefficient of Determination: 0.0025881150772977257 RMSE: 0.536344608388472 NRMSE: 0.19103993175012357 MAPE: 84.95638110314728 Predictor: RandomForests Pearson Correlation: 0.0519268743676854 Spearman Correlation: 0.08469515587880291 Coefficient of Determination: 0.002677908495351544 RMSE: 0.4830231126320359 NRMSE: 0.11656807023482296 MAPE: 119.43099809926774 Pearson Correlation: 0.13599169774339412 Spearman Correlation: 0.14852213144650117 Coefficient of Determination: 0.0028608284115207994 RMSE: 0.5362712794417089 NRMSE: 0.19101381280203344 MAPE: 84.89477575649545 Protein: CCND1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CCND1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -6.730879370375753e-05 RMSE: 0.2389020462082785 NRMSE: 0.14362100143576398 MAPE: 403.29824986195 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011305560546988058 RMSE: 0.23508009298681884 NRMSE: 0.16742642369866306 MAPE: 1303.705037451208 Protein: ERBB2 x_train_column_count: 5 x_train columns: ['ERBB2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.306520477419639e-07 RMSE: 1.0191372509121606 NRMSE: 0.1736268039102783 MAPE: 624.5447295898225 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02360779143819025 RMSE: 0.917684642000512 NRMSE: 0.17016218097543334 MAPE: 535.0245009023646 Protein: ERBB3 x_train_column_count: 5 x_train columns: ['ERBB3', '2', '1/2', '3', '1/3'] Predictor: Zero
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626023 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838235 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.989157152326726e-06 RMSE: 0.4591385838048939 NRMSE: 0.12390832574677273 MAPE: 216.81400220250083 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006459820720205345 RMSE: 0.4670202437926927 NRMSE: 0.18739577065384752 MAPE: 254.76019735334017 Fold: 2 Protein: RB1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['RB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690783 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881248 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4263644985135215e-06 RMSE: 0.23504130551959493 NRMSE: 0.08595717726725971 MAPE: 192.00946551468715 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.018558302852048847 RMSE: 0.24716609205685758 NRMSE: 0.14160837624002107 MAPE: 242.315163337212 Protein: CDH1 x_train_column_count: 5 x_train columns: ['CDH1', '2', '1/2', '3', '1/3']
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.109525118891952e-06 RMSE: 1.1205979541487452 NRMSE: 0.17977026616647873 MAPE: 436.94910044840896 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08681768836146286 RMSE: 1.1995275824231637 NRMSE: 0.21302212438699408 MAPE: 200.04996276284982 Protein: CDH2 x_train_column_count: 5 x_train columns: ['CDH2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.009663749213899673 Spearman Correlation: -0.0177629408302383 Coefficient of Determination: 9.338804886915852e-05 RMSE: 0.36808109778378306 NRMSE: 0.13337238125363543 MAPE: 309.9527137812226 Pearson Correlation: 0.0218730176357788 Spearman Correlation: 0.025908433760141823 Coefficient of Determination: 0.0001912899750754482 RMSE: 0.38704335329434714 NRMSE: 0.20390341923765898 MAPE: 139.13988840172976 Predictor: ElasticNet Pearson Correlation: 0.009663749213899682 Spearman Correlation: -0.0177629408302383 Coefficient of Determination: 9.263603588482994e-05 RMSE: 0.3680812361975656 NRMSE: 0.13337243140719096 MAPE: 322.8732812995642 Pearson Correlation: 0.021873017635778813 Spearman Correlation: 0.025908433760141823 Coefficient of Determination: 0.00017242130169037306 RMSE: 0.38704700547305404 NRMSE: 0.20390534329014476 MAPE: 139.01946797468574 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.009663749213899685 Spearman Correlation: -0.0177629408302383 Coefficient of Determination: 8.400939737418511e-05 RMSE: 0.368082823993112 NRMSE: 0.133373006737123 MAPE: 278.842964167499 Pearson Correlation: 0.021873017635778775 Spearman Correlation: 0.025908433760141823 Coefficient of Determination: 0.00012595398596160212 RMSE: 0.3870559994370275 NRMSE: 0.2039100815190565 MAPE: 137.28327214608532 Protein: CDH3
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CDH3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.06719195331369568 Spearman Correlation: 0.0683642830206949 Coefficient of Determination: 0.004122677146187859 RMSE: 0.207278110558057 NRMSE: 0.15599716312422912 MAPE: 128.66454059846384 Pearson Correlation: -0.0028502824690594605 Spearman Correlation: -0.034080842234419866 Coefficient of Determination: -0.1554551925044536 RMSE: 0.21275642510284884 NRMSE: 0.17506494289710267 MAPE: 257.4158407351104 Predictor: ElasticNet Pearson Correlation: 0.06738082015698497 Spearman Correlation: 0.08466348301281183 Coefficient of Determination: 0.004528548585995051 RMSE: 0.20723586798628527 NRMSE: 0.15596537143459185 MAPE: 125.55653249448591 Pearson Correlation: -0.001874083342536711 Spearman Correlation: -0.01573359444137587 Coefficient of Determination: -0.15712467338524116 RMSE: 0.21291007215777644 NRMSE: 0.17519137016191597 MAPE: 246.21156755612606 Predictor: RandomForests Pearson Correlation: 0.06738082015698496 Spearman Correlation: 0.08466348301281183 Coefficient of Determination: 0.004533997306119142 RMSE: 0.2072353008320048 NRMSE: 0.1559649445952186 MAPE: 123.88130487089018 Pearson Correlation: -0.0018740833425367124 Spearman Correlation: -0.01573359444137587 Coefficient of Determination: -0.15623249348827883 RMSE: 0.21282797611406923 NRMSE: 0.1751238180811892 MAPE: 239.13735110965297 Protein: PTEN
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['PTEN', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -7.039401497710429e-06 RMSE: 0.6237518167450345 NRMSE: 0.09752979700493074 MAPE: 269.1438133361505 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0008608489591892532 RMSE: 0.5118503361882523 NRMSE: 0.17166968613772884 MAPE: 475.20963201938855 Protein: BRCA2 x_train_column_count:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
5 x_train columns: ['BRCA2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.010232969871063943 Spearman Correlation: 0.0579086352952679 Coefficient of Determination: 9.93317326807297e-05 RMSE: 0.19531469424485542 NRMSE: 0.12582682831042385 MAPE: 126.23614187161327 Pearson Correlation: 0.0033090799768530662 Spearman Correlation: 0.11302137575640286 Coefficient of Determination: -0.01918119147743358 RMSE: 0.19503173992567596 NRMSE: 0.13201636731514013 MAPE: 116.23454929435744 Predictor: ElasticNet Pearson Correlation: 0.009933491753276085 Spearman Correlation: 0.014210354271543182 Coefficient of Determination: 4.7177680570054115e-05 RMSE: 0.19531978791077592 NRMSE: 0.12583010978307355 MAPE: 126.27456294031352 Pearson Correlation: 0.0027483760498676936 Spearman Correlation: 0.0 Coefficient of Determination: -0.017254969476476756 RMSE: 0.19484735068126563 NRMSE: 0.1318915548193468 MAPE: 116.23139415962869 Predictor: RandomForests Pearson Correlation: 0.00993349175327608 Spearman Correlation: 0.014210354271543182 Coefficient of Determination: 8.185192399379204e-05 RMSE: 0.19531640143871817 NRMSE: 0.1258279281293079 MAPE: 126.13259218459578 Pearson Correlation: 0.0027483760498677274 Spearman Correlation: 0.0 Coefficient of Determination: -0.017646761303319325 RMSE: 0.19488486942175295 NRMSE: 0.1319169511360041 MAPE: 116.16847352037934 Protein: CDKN2A x_train_column_count: 5 x_train columns: ['CDKN2A', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.08750035106722089 Spearman Correlation: 0.09682477874518691 Coefficient of Determination: 0.007656309403294315 RMSE: 0.6608007369039801 NRMSE: 0.14938413855634228 MAPE: 295.5606199155403 Pearson Correlation: 0.16271847951395055 Spearman Correlation: -0.002324826547787232 Coefficient of Determination: 0.020499761734582234 RMSE: 0.6664939680881069 NRMSE: 0.18005564298900661 MAPE: 248.82313302957306 Predictor: ElasticNet Pearson Correlation: 0.08749880693798523 Spearman Correlation: 0.07060057337552438 Coefficient of Determination: 0.007653574653867401 RMSE: 0.6608016474368976
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
NRMSE: 0.14938434439626935 MAPE: 295.4419278335023 Pearson Correlation: 0.162723938679865 Spearman Correlation: 0.14187188675486676 Coefficient of Determination: 0.02030203135397124 RMSE: 0.666561236808745 NRMSE: 0.18007381586577292 MAPE: 248.76136592702954 Predictor: RandomForests Pearson Correlation: 0.08749880693798534 Spearman Correlation: 0.07060057337552438 Coefficient of Determination: 0.0074218560542410605 RMSE: 0.6608787934268995 NRMSE: 0.1494017844301796 MAPE: 294.1409517475651 Pearson Correlation: 0.16272393867986507 Spearman Correlation: 0.14187188675486676 Coefficient of Determination: 0.018250019947868457 RMSE: 0.6672589394845054 NRMSE: 0.18026230264872095 MAPE: 248.00886094999836 Protein: TP53 x_train_column_count: 5 x_train columns: ['TP53', '2', '1/2', '3', '1/3'] Predictor:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941167 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -7.5504254730685005e-06 RMSE: 0.4553240341430601 NRMSE: 0.12195635037982058 MAPE: 272.77988828754343 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004972231030332841 RMSE: 0.4103999979856238 NRMSE: 0.13515560612073893 MAPE: 936.2702607021621 Protein: CTNNB1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CTNNB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.220446049250313e-16 RMSE: 0.724983586805845 NRMSE: 0.14260102022144866 MAPE: 628.0323178598311 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.21279381390156 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1971875713001623e-08 RMSE: 0.7249835911455516 NRMSE: 0.1426010210750495 MAPE: 628.1369268804478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11732463794073467 RMSE: 0.8102540736943942 NRMSE: 0.2016510474339599 MAPE: 279.25170246839326 Protein: CCNE1 x_train_column_count: 5 x_train columns: ['CCNE1', '2', '1/2', '3', '1/3'] Predictor: Zero
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.07352403392769703 Spearman Correlation: 0.050405183338003715 Coefficient of Determination: 0.005362141058104064 RMSE: 0.5114201918141511 NRMSE: 0.12342114337769412 MAPE: 119.13210347145457 Pearson Correlation: 0.06326403347098397 Spearman Correlation: -0.005230859732521273 Coefficient of Determination: 0.0014280551197395353 RMSE: 0.4179745597890537 NRMSE: 0.22716132141427603 MAPE: 82.2094632542514 Predictor: ElasticNet Pearson Correlation: 0.07420730450328147 Spearman Correlation: 0.0996840207349156 Coefficient of Determination: 0.005504090295842756 RMSE: 0.5113836969753315 NRMSE: 0.12341233607050016 MAPE: 119.09482524283486 Pearson Correlation: 0.06574685842975657 Spearman Correlation: 0.10418716683560529 Coefficient of Determination: 0.002899452345255349 RMSE: 0.4176665032032884 NRMSE: 0.22699389844688747 MAPE: 82.13852084666861 Predictor: RandomForests Pearson Correlation: 0.07420730450328139 Spearman Correlation: 0.0996840207349156 Coefficient of Determination: 0.005453640118453951 RMSE: 0.511396667904013 NRMSE: 0.12341546634747036 MAPE: 118.86223438781687 Pearson Correlation: 0.06574685842975653 Spearman Correlation: 0.10418716683560529 Coefficient of Determination: 0.0033666135664930374 RMSE: 0.41756864925384035 NRMSE: 0.22694071666359078 MAPE: 82.03254494672801 Protein: CCND1 x_train_column_count: 5 x_train columns: ['CCND1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.97203800434265e-05 RMSE: 0.23875113536941006 NRMSE: 0.14353027820358663 MAPE: 623.0252662656405 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002702257656317375 RMSE: 0.23574750143052878 NRMSE: 0.18238805272523426 MAPE: 416.53723258036024 Protein: ERBB2 x_train_column_count: 5 x_train columns: ['ERBB2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.96437320566923 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069652 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4560613754488472e-05 RMSE: 0.9830158815454965 NRMSE: 0.17641115545564603 MAPE: 400.90644503187656 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008478449779226516 RMSE: 1.0616738552038782 NRMSE: 0.18087361452951228 MAPE: 1326.1075521313205 Protein: ERBB3
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['ERBB3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -7.296729507277888e-07 RMSE: 0.44513322107520426 NRMSE: 0.12012868032265928 MAPE: 216.7226642402447 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003138473719825896 RMSE: 0.5178567313325867 NRMSE: 0.19111995960000838 MAPE: 281.4593255894813 Fold: 3 Protein: RB1 x_train_column_count: 5 x_train columns: ['RB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9251142089338202e-05 RMSE: 0.24058346095584196 NRMSE: 0.08798400415295567 MAPE: 209.8403217597603 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.029112616313034634 RMSE: 0.22486854838603798 NRMSE: 0.15778698821592121 MAPE: 175.78781390152616 Protein: CDH1 x_train_column_count: 5 x_train columns: ['CDH1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: -0.06908988770414354 Spearman Correlation: -0.07099355218947548 Coefficient of Determination: -1.3965033799426917e+25 RMSE: 4389864091902.776 NRMSE: 699000683402.2444 MAPE: 5211366957362809.0 Pearson Correlation: 0.053669980429984165 Spearman Correlation: 0.06682596597781153 Coefficient of Determination: -2.1493707413547995e+25 RMSE: 4365101878609.5283 NRMSE: 858157094839.2892 MAPE: 2713442568295388.5 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -8.038036049451414e-05 RMSE: 1.1747556244380437 NRMSE: 0.18705704029139894 MAPE: 559.5420968885569 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05064331478686768 RMSE: 0.9650867846881294 NRMSE: 0.18973121233989884 MAPE: 299.4500741482848 Protein: CDH2 x_train_column_count: 5 x_train columns: ['CDH2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.013144969141628214 Spearman Correlation: -0.006753794768230431 Coefficient of Determination: -0.0010106130852893802 RMSE: 0.3814305601313419 NRMSE: 0.13820949348914485 MAPE: 645.9144609324583 Pearson Correlation: 0.0073672732940825575 Spearman Correlation: 0.009670338274985611 Coefficient of Determination: -0.0046630054822220934 RMSE: 0.33275154683975444 NRMSE: 0.1753280222352069 MAPE: 652.6818343284667 Predictor: ElasticNet Pearson Correlation: 0.013144969141628198 Spearman Correlation: -0.006753794768230431 Coefficient of Determination: 0.00017220002048812244 RMSE: 0.38120514073344436 NRMSE: 0.13812781387544185 MAPE: 123.66292078013011
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.007367273294082561 Spearman Correlation: 0.009670338274985611 Coefficient of Determination: -0.0023766476762474564 RMSE: 0.3323727021792481 NRMSE: 0.1751284075806943 MAPE: 635.7284715579443 Predictor: RandomForests Pearson Correlation: 0.013144969141628216 Spearman Correlation: -0.006753794768230431 Coefficient of Determination: 0.00017054406448901993 RMSE: 0.3812054564171442 NRMSE: 0.13812792826188283 MAPE: 155.66629715298168 Pearson Correlation: 0.007367273294082566 Spearman Correlation: 0.009670338274985611 Coefficient of Determination: -0.0024722291997434365 RMSE: 0.3323885484841413 NRMSE: 0.17513675705742265 MAPE: 634.0131443807717 Protein: CDH3
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CDH3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.04731514410157307 Spearman Correlation: 0.06536868965273418 Coefficient of Determination: 0.002161779913651074 RMSE: 0.21228087828938935 NRMSE: 0.14893141261813814 MAPE: 121.24927607254156 Pearson Correlation: -0.0010134210653460866 Spearman Correlation: 0.011137660996301922 Coefficient of Determination: -0.0018870787590945515 RMSE: 0.18850588232214502 NRMSE: 0.16396520942717913 MAPE: 100.82887229432052 Predictor: ElasticNet Pearson Correlation: 0.04725188302701318 Spearman Correlation: 0.053564309919690634 Coefficient of Determination: 0.0022253460661366686 RMSE: 0.21227411662536536 NRMSE: 0.14892666878919386 MAPE: 109.9615133259167 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028677721897270025 RMSE: 0.18859811889626027 NRMSE: 0.1640454381659609 MAPE: 99.69915877049237 Predictor: RandomForests Pearson Correlation: 0.047251883027013115 Spearman Correlation: 0.053564309919690634 Coefficient of Determination: 0.002224420555647977 RMSE: 0.21227421507538866 NRMSE: 0.14892673785948018 MAPE: 113.75195177449282 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0025016608794410367 RMSE: 0.18856369052533004 NRMSE: 0.1640154918588204 MAPE: 100.09430668977957 Protein: PTEN x_train_column_count: 5 x_train columns: ['PTEN', '2', '1/2', '3', '1/3'] Predictor: Zero
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 0.033198542537888974 Spearman Correlation: 0.030088680013822013 Coefficient of Determination: -3.044244162819746e+24 RMSE: 1097977781466.0852 NRMSE: 171679740671.73563 MAPE: 2812338733941592.0 Pearson Correlation: -0.06717612755754554 Spearman Correlation: -0.07478143811802718 Coefficient of Determination: -5.389464491354464e+24 RMSE: 1093340325745.8588 NRMSE: 261402076637.94263 MAPE: 623787505505293.4 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.3419559188896386e-06 RMSE: 0.6292953701743222 NRMSE: 0.09839658668975408 MAPE: 302.4002823083477 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06220027117065996 RMSE: 0.4853843427917682 NRMSE: 0.11604847290961799 MAPE: 95.26027671741345 Protein: BRCA2 x_train_column_count: 5 x_train columns: ['BRCA2', '2', '1/2', '3', '1/3'] Predictor:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.0013919610646360276 Spearman Correlation: 0.005062699493336157 Coefficient of Determination: -0.0011403800369909067 RMSE: 0.19015848267536856 NRMSE: 0.1281633210278008 MAPE: 106.0841445214794 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009662955929512496 RMSE: 0.21423485143235954 NRMSE: 0.14735286124284475 MAPE: 102.68936094734602 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: RandomForests Pearson Correlation: -0.0013919610646360295 Spearman Correlation: -0.005062699493336157 Coefficient of Determination: -6.364934274283307e-05 RMSE: 0.19005619704140198 NRMSE: 0.1280943823911533 MAPE: 118.5639808796393 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0033973031901091133 RMSE: 0.21449484556078072 NRMSE: 0.14753168778984704 MAPE: 114.4327136067381 Protein: CDKN2A x_train_column_count: 5 x_train columns: ['CDKN2A', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.07451396822011769 Spearman Correlation: 0.05204982098480056 Coefficient of Determination: 0.005552294865122764 RMSE: 0.665732161336883 NRMSE: 0.1554286891429032 MAPE: 312.07153004767093 Pearson Correlation: 0.2033249710980876 Spearman Correlation: 0.16955865700886172 Coefficient of Determination: 0.02775958107169263 RMSE: 0.6473644248976175 NRMSE: 0.1998593513314246 MAPE: 177.4578416600062 Predictor: ElasticNet Pearson Correlation: 0.0744924316214533 Spearman Correlation: 0.06902697312624104 Coefficient of Determination: 0.005546716646277483 RMSE: 0.6657340285011699 NRMSE: 0.15542912507031423 MAPE: 311.8106430230853 Pearson Correlation: 0.20328513940094928 Spearman Correlation: 0.14682952634209145 Coefficient of Determination: 0.027314648673842257 RMSE: 0.6475125366476315 NRMSE: 0.19990507753623893 MAPE: 177.3572947047083 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.07449243162145311 Spearman Correlation: 0.06902697312624104 Coefficient of Determination: 0.005427260142017776 RMSE: 0.6657740122153659 NRMSE: 0.15543846008016574 MAPE: 310.4155764284463 Pearson Correlation: 0.20328513940094914 Spearman Correlation: 0.14682952634209145 Coefficient of Determination: 0.024503574046781718 RMSE: 0.6484475218674116 NRMSE: 0.2001937334035416 MAPE: 176.83385863323122 Protein: TP53 x_train_column_count: 5 x_train columns: ['TP53', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.1739983064529142 Spearman Correlation: 0.09636243925995286 Coefficient of Determination: -2.3779319413161545e+25 RMSE: 2194932045951.6914 NRMSE: 527501092514.22534 MAPE: 8050252243645680.0 Pearson Correlation: -0.17541311624576428 Spearman Correlation: -0.18934023693713267 Coefficient of Determination: -2.5709090195709736e+25 RMSE: 2182550939305.0295 NRMSE: 813871453935.7754 MAPE: 5300448333672841.0 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.127886026492831e-06 RMSE: 0.45011328478522344 NRMSE: 0.10817430540380281 MAPE: 384.97620402785606 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010235836874693982 RMSE: 0.4326457281494117 NRMSE: 0.16133323693246113 MAPE: 262.48262286795716 Protein: CTNNB1 x_train_column_count: 5 x_train columns: ['CTNNB1', '2', '1/2', '3', '1/3']
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: -0.06776136772572479 Spearman Correlation: -0.06961694859671709 Coefficient of Determination: -8.142663688938499e+24 RMSE: 2194932045951.0986 NRMSE: 431733289919.571 MAPE: 1941997302632161.0 Pearson Correlation: 0.01479416515069219 Spearman Correlation: 0.01909313313651758 Coefficient of Determination: -1.2677972680989773e+25 RMSE: 2182550939304.4346 NRMSE: 713508430907.9846 MAPE: 6038023867159378.0 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.3651813305723977e-05 RMSE: 0.7692103826358508 NRMSE: 0.15130023261916817 MAPE: 448.4586738716637 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010039645692692112 RMSE: 0.6160396894843083 NRMSE: 0.20139255597904746 MAPE: 1395.83653435531 Protein: CCNE1 x_train_column_count: 5 x_train columns: ['CCNE1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.07188063701483952 Spearman Correlation: 0.0958698472887527 Coefficient of Determination: 0.004682931540436974 RMSE: 0.52119830967078 NRMSE: 0.12578089863425923 MAPE: 106.30266967764098 Pearson Correlation: 0.07812502788834248 Spearman Correlation: 0.11992946044735714 Coefficient of Determination: -0.002022640684466115 RMSE: 0.3652574652968161 NRMSE: 0.15910505087634103 MAPE: 134.36291324685828 Predictor: ElasticNet Pearson Correlation: 0.0718806370148394 Spearman Correlation: 0.0958698472887527 Coefficient of Determination: 0.005164285384763989 RMSE: 0.5210722638317398 NRMSE: 0.12575047996518565 MAPE: 105.46805258641514 Pearson Correlation: 0.07812502788834244 Spearman Correlation: 0.11992946044735714 Coefficient of Determination: -0.005614944842203373 RMSE: 0.3659116131973085 NRMSE: 0.15938999572997714 MAPE: 132.76879225732887 Predictor: RandomForests Pearson Correlation: 0.07188063701483922 Spearman Correlation: 0.0958698472887527 Coefficient of Determination: 0.0051539529043052035 RMSE: 0.5210749697835492 NRMSE: 0.12575113299310983 MAPE: 105.51207161524754 Pearson Correlation: 0.0781250278883424 Spearman Correlation: 0.11992946044735714 Coefficient of Determination: -0.005111566061356543 RMSE: 0.36582001988982876 NRMSE: 0.1593500979613315 MAPE: 132.84961543133034 Protein: CCND1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CCND1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.03024365083278924 Spearman Correlation: 0.03284189319681554 Coefficient of Determination: -3.219505114995222e+26 RMSE: 4389864091903.0425 NRMSE: 2639059342741.486 MAPE: 1.6902809641643144e+16 Pearson Correlation: -0.02052565344237195 Spearman Correlation: -0.0015910944280431315 Coefficient of Determination: -4.331396453972183e+26 RMSE: 4365101878609.599 NRMSE: 4136243524404.308 MAPE: 1.3052762982106682e+16 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.4116478916667035e-06 RMSE: 0.24465690258910402 NRMSE: 0.14708065466875717 MAPE: 622.5870209040851 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0008938093409120995 RMSE: 0.20983330328280636 NRMSE: 0.19883193245980532 MAPE: 469.34659613783066 Protein: ERBB2 x_train_column_count: 5 x_train columns: ['ERBB2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 0.03515736601111309 Spearman Correlation: 0.046214641017594676 Coefficient of Determination: -7.818367969225788e+22 RMSE: 274366505743.6594 NRMSE: 46742849846.441795 MAPE: 539698127663235.94 Pearson Correlation: -0.13212988969414974 Spearman Correlation: -0.0652349528911736 Coefficient of Determination: -6.543250951320211e+22 RMSE: 272818867412.7747 NRMSE: 49213303162.70559 MAPE: 219859121480981.44 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -8.15820629518349e-06 RMSE: 0.9812390210263281 NRMSE: 0.16717021671062032 MAPE: 598.5939208181778 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004188610298379913 RMSE: 1.068772470679015 NRMSE: 0.19279393727523902 MAPE: 269.63060457851583 Protein: ERBB3 x_train_column_count: 5 x_train columns: ['ERBB3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.07317605329736626 Spearman Correlation: 0.08259638605599987 Coefficient of Determination: -7.178972421406544e+26 RMSE: 12084033173396.693 NRMSE: 4381654383055.29 MAPE: 1.3102250896714858e+16 Pearson Correlation: 0.08337327440317537 Spearman Correlation: 0.09864785453867417 Coefficient of Determination: -5.9346992748901756e+26 RMSE: 12052034477350.45 NRMSE: 3350812393786.1816 MAPE: 8415887096943945.0 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9170159786252583e-06 RMSE: 0.45100481929229386 NRMSE: 0.16353374861479833 MAPE: 235.79472521493977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014658626088311477 RMSE: 0.498334532216317 NRMSE: 0.1385513400198282 MAPE: 160.9258353666711 Fold: 4 Protein: RB1 x_train_column_count: 5 x_train columns: ['RB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: -0.15839095139766216 Spearman Correlation: -0.02379562275602918 Coefficient of Determination: -3.1526251016967364e+23 RMSE: 141218914723.26932 NRMSE: 51645302341.74566 MAPE: 875837520830274.4 Pearson Correlation: -0.08198572502803168 Spearman Correlation: -0.06682596597781153 Coefficient of Determination: -8.503748278035135e+23 RMSE: 152047528232.22147 NRMSE: 145678465711.32245 MAPE: 304620574101347.44 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.4098473865530323e-05 RMSE: 0.25151386894767247 NRMSE: 0.09198137395687261 MAPE: 141.616178993359 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07599103874721358 RMSE: 0.1710324408043952 NRMSE: 0.16386812632161424 MAPE: 100.2445075488262 Protein: CDH1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CDH1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: -0.07147256963638145 Spearman Correlation: -0.07335344866114779 Coefficient of Determination: -1.6308602541412765e+25 RMSE: 4519005271144.52 NRMSE: 719563910567.2621 MAPE: 5121431066606746.0 Pearson Correlation: -0.13160331230028094 Spearman Correlation: -0.08114581583019972 Coefficient of Determination: -1.7399171672103283e+25 RMSE: 4865520903429.487 NRMSE: 882682214620.2037 MAPE: 3198342806593835.0 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -7.574853195158049e-05 RMSE: 1.1190536846804813 NRMSE: 0.17818758712787508 MAPE: 563.4401015673177 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0697766676219389 RMSE: 1.206456359084116 NRMSE: 0.21887020773631508 MAPE: 378.45418640238364 Protein: CDH2 x_train_column_count: 5 x_train columns: ['CDH2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.0300496673017343 Spearman Correlation: 0.021327840093619946 Coefficient of Determination: 0.0009029825049449158 RMSE: 0.3791922171900172 NRMSE: 0.1373984408978974 MAPE: 503.3332546571895 Pearson Correlation: -0.06782633649554902 Spearman Correlation: -0.10354765953166792 Coefficient of Determination: -0.06296511830829665 RMSE: 0.3435989756364615 NRMSE: 0.17725175170053933 MAPE: 138.48717374722776 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.03004966730173426 Spearman Correlation: 0.021327840093619946 Coefficient of Determination: 0.0009023595984081201 RMSE: 0.3791923353973934 NRMSE: 0.13739848372976063 MAPE: 491.48655040079603 Pearson Correlation: -0.06782633649554896 Spearman Correlation: -0.10354765953166792 Coefficient of Determination: -0.0627814260289441 RMSE: 0.34356928547778415 NRMSE: 0.17723643549470933 MAPE: 137.37324141300806 Predictor: RandomForests Pearson Correlation: 0.030049667301734306 Spearman Correlation: 0.021327840093619946 Coefficient of Determination: 0.000901864240836936 RMSE: 0.3791924294001031 NRMSE: 0.13739851779118165 MAPE: 512.552755472322 Pearson Correlation: -0.06782633649554894 Spearman Correlation: -0.10354765953166792 Coefficient of Determination: -0.06262986529635794 RMSE: 0.3435447868048161 NRMSE: 0.1772237974107631 MAPE: 139.2481725997938 Protein: CDH3
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CDH3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.03792723310987204 Spearman Correlation: 0.05476901663895657 Coefficient of Determination: -0.0002474722641112592 RMSE: 0.2059355526479616 NRMSE: 0.14676764446025456 MAPE: 163.74761511499537 Pearson Correlation: 0.08663705027259988 Spearman Correlation: 0.1904518179706401 Coefficient of Determination: -0.08220040146970997 RMSE: 0.21616801495075946 NRMSE: 0.19239903781864412 MAPE: 189.84174807453152 Predictor: ElasticNet Pearson Correlation: 0.03763546790459486 Spearman Correlation: 0.04346736260721379 Coefficient of Determination: 0.00140701117755071 RMSE: 0.20576516582831084 NRMSE: 0.14664621194485997 MAPE: 179.87400038662398 Pearson Correlation: 0.0807354928325274 Spearman Correlation: 0.10423775534209546 Coefficient of Determination: -0.09693079900183643 RMSE: 0.21763423059787684 NRMSE: 0.1937040342114004 MAPE: 212.78169265407774 Predictor: RandomForests Pearson Correlation: 0.03763546790459478 Spearman Correlation: 0.04346736260721379 Coefficient of Determination: 0.001389430234007727 RMSE: 0.20576697714176978 NRMSE: 0.14664750284488345 MAPE: 185.76105937028902 Pearson Correlation: 0.08073549283252739 Spearman Correlation: 0.10423775534209546 Coefficient of Determination: -0.10001564080346803 RMSE: 0.21794003649847146 NRMSE: 0.19397621490865605 MAPE: 220.31985171364403 Protein: PTEN x_train_column_count: 5 x_train columns: ['PTEN', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
-0.03991385427951843 Spearman Correlation: -0.03264523452480035 Coefficient of Determination: -2.385215596188861e+23 RMSE: 274366505744.07275 NRMSE: 53073062856.71478 MAPE: 526822224193400.3 Pearson Correlation: 0.05858430783392102 Spearman Correlation: 0.08273691025824284 Coefficient of Determination: -1.338968486106944e+23 RMSE: 272818867413.21844 NRMSE: 42657941898.71291 MAPE: 862895558141148.5 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.3515784225723877e-06 RMSE: 0.5617822327435491 NRMSE: 0.10867034833324611 MAPE: 275.23235997653785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011889288820654542 RMSE: 0.7456156921871908 NRMSE: 0.11658442532830753 MAPE: 434.68040701520795 Protein: BRCA2 x_train_column_count: 5 x_train columns: ['BRCA2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.0024074094584045887 Spearman Correlation: 0.007152067813778633 Coefficient of Determination: -0.0001554505110010762 RMSE: 0.19181217429185007 NRMSE: 0.12357041345907559 MAPE: 104.98979599176204 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -8.899032831299891e-05 RMSE: 0.20811664589011566 NRMSE: 0.20219044397714553 MAPE: 126.96726836370951 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: -0.002407409458404594 Spearman Correlation: -0.007152067813778633 Coefficient of Determination: -0.00010133005259027605 RMSE: 0.19180698454697903 NRMSE: 0.12356707008985604 MAPE: 105.6400888342812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.869184616025258e-05 RMSE: 0.20811349333754217 NRMSE: 0.2021873811947248 MAPE: 128.85278659931006 Protein: CDKN2A
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CDKN2A', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.11733924052278731 Spearman Correlation: 0.0794588497399506 Coefficient of Determination: 0.013768497262808377 RMSE: 0.6692992632386721 NRMSE: 0.15130536074119408 MAPE: 289.20876556149165 Pearson Correlation: 0.15363112396253215 Spearman Correlation: 0.09546566568258791 Coefficient of Determination: -0.0014294521023823226 RMSE: 0.6311259771773139 NRMSE: 0.1901554616382386 MAPE: 201.31495292939044 Predictor: ElasticNet Pearson Correlation: 0.117338920955943 Spearman Correlation: 0.098119935909109 Coefficient of Determination: 0.013766804393846921 RMSE: 0.669299837665396 NRMSE: 0.15130549059916265 MAPE: 289.12126431423314 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014371634956056312 RMSE: 0.631128407129421 NRMSE: 0.1901561937720461 MAPE: 201.27170779665207 Predictor: RandomForests Pearson Correlation: 0.11733892095594302 Spearman Correlation: 0.098119935909109 Coefficient of Determination: 0.013766997704653283 RMSE: 0.6692997720709208 NRMSE: 0.15130547577052578 MAPE: 288.3056038367429 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015204269220872035 RMSE: 0.6311546438337229 NRMSE: 0.19016409877484872 MAPE: 200.79083177774612 Protein: TP53 x_train_column_count: 5 x_train columns: ['TP53', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.17337771349863737 Spearman Correlation: 0.09518249285783666 Coefficient of Determination: -2.377864784208625e+25 RMSE: 2194932045951.696 NRMSE: 527501092514.22644 MAPE: 8539043353199367.0 Pearson Correlation: -0.1806834386788437 Spearman Correlation: -0.1050122322508467 Coefficient of Determination: -2.5546926265188087e+25 RMSE: 2182550939305.0117 NRMSE: 692609462841.1436 MAPE: 3332537817865816.5 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.1531098099613075e-05 RMSE: 0.45012625834621206 NRMSE: 0.10817742329877725 MAPE: 427.72581172445143 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019027794096784234 RMSE: 0.4322229787940365 NRMSE: 0.13716139210270262 MAPE: 188.46285720066712 Protein: CTNNB1 x_train_column_count: 5 x_train columns: ['CTNNB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.06890104375668284 Spearman Correlation: 0.06961694993790911 Coefficient of Determination: -3.8075154017012083e+25 RMSE: 4389864091903.7603 NRMSE: 1060251205657.3666 MAPE: 5092647784288974.0 Pearson Correlation: 0.013751495723084851 Spearman Correlation: 0.031821888560862634 Coefficient of Determination: -2.9590219679197283e+25 RMSE: 4365101878610.0107 NRMSE: 917732293038.8551 MAPE: 7211970352696983.0 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.336102732056425e-05 RMSE: 0.7114458123477446 NRMSE: 0.1718302126238394 MAPE: 637.4091255030693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.15602567556949265 RMSE: 0.862787867807884 NRMSE: 0.1813951450273072 MAPE: 938.6635184615642 Protein: CCNE1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CCNE1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.08086614841332661 Spearman Correlation: 0.15149256271307932 Coefficient of Determination: 0.006538992482931993 RMSE: 0.5031511832195955 NRMSE: 0.12142558177947137 MAPE: 102.61072924119733 Pearson Correlation: -0.19784560230899031 Spearman Correlation: -0.12092317653127801 Coefficient of Determination: -0.017596123956787668 RMSE: 0.4560523919911099 NRMSE: 0.18609825838207378 MAPE: 142.23160349219717 Predictor: ElasticNet Pearson Correlation: 0.08084021092875136 Spearman Correlation: 0.11465904194219208 Coefficient of Determination: 0.006533100830258154 RMSE: 0.5031526751692526 NRMSE: 0.12142594183199859 MAPE: 102.59093115029954 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017684124641142995 RMSE: 0.4560721110397709 NRMSE: 0.18610630500276298 MAPE: 142.20536103970616 Predictor: RandomForests Pearson Correlation: 0.08084021092875132 Spearman Correlation: 0.11465904194219208 Coefficient of Determination: 0.006534968139914943 RMSE: 0.5031522023088626 NRMSE: 0.12142582771650037 MAPE: 102.5747169230077 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017833558037302133 RMSE: 0.45610559387651795 NRMSE: 0.18611996812067166 MAPE: 142.1703617155453 Protein: CCND1 x_train_column_count: 5 x_train columns: ['CCND1', '2', '1/2', '3', '1/3']
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: -0.031551210917873974 Spearman Correlation: -0.036185079232308834 Coefficient of Determination: -2.0906659530023282e+27 RMSE: 10987756487675.156 NRMSE: 7019943833886.071 MAPE: 4.23869842500397e+16 Pearson Correlation: -0.062487844799439834 Spearman Correlation: -0.047732832841293954 Coefficient of Determination: -2.292882780535693e+27 RMSE: 10965537373028.527 NRMSE: 6915702177742.513 MAPE: 3.2840228381473464e+16 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -7.578650524475705e-06 RMSE: 0.2403080660151938 NRMSE: 0.15352989740432257 MAPE: 631.7406717684042 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015018985732184742 RMSE: 0.22917375541492033 NRMSE: 0.14453440679548457 MAPE: 486.008501755422 Protein: ERBB2 x_train_column_count: 5 x_train columns: ['ERBB2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.417933440622997e+22 RMSE: 206158430208.24377 NRMSE: 35122481593.30865 MAPE: 415491673830350.06 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.954799332444009e+22 RMSE: 206158430208.53857 NRMSE: 37122921130.935745 MAPE: 147379740537383.2 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.136696957366624e-06 RMSE: 0.9808260193487461 NRMSE: 0.16709985507755867 MAPE: 527.2581033665992 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0816534943576046 RMSE: 1.0781593445925315 NRMSE: 0.19414400990249783 MAPE: 193.10766728184439 Protein: ERBB3 x_train_column_count: 5 x_train columns: ['ERBB3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.0708160629372478 Spearman Correlation: 0.08338301669775249 Coefficient of Determination: -2.111071143245884e+25
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
RMSE: 2194932045951.386 NRMSE: 600168994761.384 MAPE: 2220368673655440.5 Pearson Correlation: 0.029543427003469597 Spearman Correlation: 0.004773283284129395 Coefficient of Determination: -3.2207242193561247e+25 RMSE: 2182550939304.677 NRMSE: 1074264491430.5359 MAPE: 2175990053263638.0 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -8.109459215255299e-08 RMSE: 0.477715862467629 NRMSE: 0.13062374732174947 MAPE: 235.40564654781124 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.000489096718886195 RMSE: 0.384674855326909 NRMSE: 0.1893392407856143 MAPE: 219.75997191205136 Fold: 5 Protein: RB1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['RB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.04215618867810057 Spearman Correlation: 0.0389382917825932 Coefficient of Determination: -3.43971884345876e+23 RMSE: 137183252871.97774 NRMSE: 67770585789.15327 MAPE: 550076024501359.25 Pearson Correlation: 0.2961378979099633 Spearman Correlation: 0.027048605276733237 Coefficient of Determination: -3.220549957368941e+23 RMSE: 136409433706.63033 NRMSE: 68778328109.75049 MAPE: 1546346762544234.0 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.0260396834160801e-05 RMSE: 0.23390626370573805 NRMSE: 0.11555320477699571 MAPE: 103.42314068679886 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11639433248952269 RMSE: 0.25397337914995716 NRMSE: 0.1280546654851245 MAPE: 122.26566295301933 Protein: CDH1 x_train_column_count: 5 x_train columns: ['CDH1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.4406566559024247e+26 RMSE: 17592186044416.363 NRMSE: 2801214299610.898 MAPE: 1.1176898856887064e+16 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2930626170900537e+26 RMSE: 17592186044416.516 NRMSE: 3459555573030.327 MAPE: 4.9940744915085816e+16 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010807252483369112 RMSE: 1.1261336384065677 NRMSE: 0.17931493239173396 MAPE: 272.91326398306535 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01464370336783083 RMSE: 1.1702230127671565 NRMSE: 0.2301278269389307 MAPE: 1099.0733237968934 Protein: CDH2 x_train_column_count: 5 x_train columns: ['CDH2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.010531318669379088 Spearman Correlation: 0.0013698976602782161 Coefficient of Determination: -0.00011225591530839019 RMSE: 0.35915656370422044 NRMSE: 0.17639436358932292 MAPE: 203.74742088678465 Pearson Correlation: 0.014766348345218405 Spearman Correlation: 0.03651237472759608 Coefficient of Determination: -0.015462670860705519 RMSE: 0.4203038787221378 NRMSE: 0.15717288810356106 MAPE: 1008.0252301310546 Predictor: ElasticNet Pearson Correlation: 0.010641857445711724 Spearman Correlation: 0.0015351265807716104 Coefficient of Determination: 0.00011260983872563024 RMSE: 0.35911618496113973 NRMSE: 0.17637453217481444 MAPE: 197.6265991844433 Pearson Correlation: 0.011164952153692375 Spearman Correlation: -0.04761525104101502 Coefficient of Determination: -0.015224069719799171 RMSE: 0.4202544968593186 NRMSE: 0.1571544217262751 MAPE: 168.24130203846494 Predictor: RandomForests Pearson Correlation: 0.01064185744571171 Spearman Correlation: 0.0015351265807716104 Coefficient of Determination: 0.00010973482168841198 RMSE: 0.35911670125148304 NRMSE: 0.1763747857430789 MAPE: 194.01817192416001 Pearson Correlation: 0.011164952153692374 Spearman Correlation: -0.04761525104101502 Coefficient of Determination: -0.015607223364809686 RMSE: 0.42033379307442126 NRMSE: 0.15718407459357975 MAPE: 232.99420442831806 Protein: CDH3
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CDH3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.03763883761819577 Spearman Correlation: -0.0068722181870598436 Coefficient of Determination: 0.0012976754728399875 RMSE: 0.20363553404388376 NRMSE: 0.14286603668117792 MAPE: 129.67716333222535 Pearson Correlation: 0.05628486552288396 Spearman Correlation: -0.014414885022428032 Coefficient of Determination: -0.0017516991391428594 RMSE: 0.22358771508834174 NRMSE: 0.2017229631161791 MAPE: 103.51047017982857 Predictor: ElasticNet Pearson Correlation: 0.03817002397504613 Spearman Correlation: 0.04026301793399473 Coefficient of Determination: 0.0014449422580076199 RMSE: 0.20362051963202607 NRMSE: 0.14285550291296661 MAPE: 142.54536422993206 Pearson Correlation: 0.05682417457895169 Spearman Correlation: 0.057279399409552734 Coefficient of Determination: -0.0033324360243640605 RMSE: 0.22376405321258724 NRMSE: 0.20188205704904164 MAPE: 106.64160432196543 Predictor: RandomForests Pearson Correlation: 0.038170023975046166 Spearman Correlation: 0.04026301793399473 Coefficient of Determination: 0.0014445327695656873 RMSE: 0.20362056138247345 NRMSE: 0.1428555322041263 MAPE: 145.70763739621518 Pearson Correlation: 0.05682417457895166 Spearman Correlation: 0.057279399409552734 Coefficient of Determination: -0.0036542509828394465 RMSE: 0.22379993605836807 NRMSE: 0.20191443089379016 MAPE: 107.39493767902192 Protein: PTEN x_train_column_count: 5 x_train columns: ['PTEN', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: -0.036370370185388995 Spearman Correlation: -0.05290101257332107 Coefficient of Determination: -9.29941329473107e+23 RMSE: 548733011487.7719 NRMSE: 85799861072.2808 MAPE: 1124273992082491.2 Pearson Correlation: 0.055272463130095546 Spearman Correlation: 0.057279399409552734 Coefficient of Determination: -5.7159697714465904e+23 RMSE: 545637734826.13824 NRMSE: 105547379841.02025 MAPE: 1442218769205144.2 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -6.269934017089085e-06 RMSE: 0.5690293593838737 NRMSE: 0.08897339682337169 MAPE: 306.950665127385 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005469590696549398 RMSE: 0.7236755599168984 NRMSE: 0.1399867610486108 MAPE: 394.53455353066096 Protein: BRCA2
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['BRCA2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.009756338778020816 Spearman Correlation: 0.020125932719451053 Coefficient of Determination: 2.4297369714432193e-05 RMSE: 0.2004657654019962 NRMSE: 0.12914528291318808 MAPE: 102.42817769594366 Pearson Correlation: -0.032221381362155466 Spearman Correlation: -0.12367544604715468 Coefficient of Determination: -0.09176322718758767 RMSE: 0.17354069094546187 NRMSE: 0.22695441175107808 MAPE: 101.64135528833467 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: RandomForests Pearson Correlation: 0.0017293408339849263 Spearman Correlation: 0.001573264496304759 Coefficient of Determination: -3.743825403090817e-05 RMSE: 0.20047195339637808 NRMSE: 0.12914926938082016 MAPE: 105.32990823311846 Pearson Correlation: -0.004853743052261784 Spearman Correlation: -0.016812541184208947 Coefficient of Determination: -0.09796167737362804 RMSE: 0.1740326295045223 NRMSE: 0.22759776303475093 MAPE: 104.01668259856571 Protein: CDKN2A
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CDKN2A', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 0.12975487290980275 Spearman Correlation: 0.03927094179063211 Coefficient of Determination: 0.016836322995988362 RMSE: 0.6739414585822296 NRMSE: 0.17161301178534533 MAPE: 279.91270356111494 Pearson Correlation: 0.04191094524587434 Spearman Correlation: 0.028512790693065015 Coefficient of Determination: -0.025247447068182938 RMSE: 0.6135511361571782 NRMSE: 0.15438744273097763 MAPE: 285.1394005954458 Predictor: ElasticNet Pearson Correlation: 0.12976399481728113 Spearman Correlation: 0.10363878671427582 Coefficient of Determination: 0.01683621832045401 RMSE: 0.6739414944588502 NRMSE: 0.17161302092099776 MAPE: 279.79724242582887 Pearson Correlation: 0.041940200087890865 Spearman Correlation: 0.05267929571052136 Coefficient of Determination: -0.024443945272623058 RMSE: 0.6133106644205001 NRMSE: 0.1543269329962759 MAPE: 284.92641295347727 Predictor: RandomForests Pearson Correlation: 0.1297639948172811 Spearman Correlation: 0.10363878671427582 Coefficient of Determination: 0.016711889881956488 RMSE: 0.6739841055916045 NRMSE: 0.17162387145517163 MAPE: 281.9278185882 Pearson Correlation: 0.0419402000878908 Spearman Correlation: 0.05267929571052136 Coefficient of Determination: -0.020087039319949485 RMSE: 0.6120050858825572 NRMSE: 0.15399841118304955 MAPE: 286.4116290542241 Protein: TP53 x_train_column_count: 5 x_train columns: ['TP53', '2', '1/2', '3', '1/3']
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.488458933638029e-05 RMSE: 0.4238024451568515 NRMSE: 0.10778566218796296 MAPE: 470.36376241957163 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015597451398132733 RMSE: 0.5285575165017301 NRMSE: 0.14157158604572925 MAPE: 142.3071053757321 Protein: CTNNB1 x_train_column_count: 5 x_train columns: ['CTNNB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: -0.01280853453160576 Spearman Correlation: -0.012979431344355934 Coefficient of Determination: -3.0397842535819265e+26 RMSE: 13180507812002.354 NRMSE: 2592546776554.358 MAPE: 1.882796389601939e+16 Pearson Correlation: 0.1560046038598718 Spearman Correlation: 0.14638068737996812 Coefficient of Determination: -3.7594578660616594e+26 RMSE: 13139323594027.277 NRMSE: 4208098153666.671 MAPE: 7456792357961123.0 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.019855616894553e-05 RMSE: 0.7559997686116472 NRMSE: 0.14870176408568986 MAPE: 710.9942516797496 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -7.503681818787911e-06 RMSE: 0.6776602739280774 NRMSE: 0.21703255324545534 MAPE: 272.4237928007498 Protein: CCNE1 x_train_column_count: 5 x_train columns: ['CCNE1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.08097211632020355 Spearman Correlation: 0.11388036360295165 Coefficient of Determination: 0.006556483621372622 RMSE: 0.44731941888179777 NRMSE: 0.15933015810571602 MAPE: 111.75141266976856 Pearson Correlation: 0.05263185104833813 Spearman Correlation: -0.10327858280733754 Coefficient of Determination: -0.0016479170488092887 RMSE: 0.6486298867276442 NRMSE: 0.15653398815735797 MAPE: 115.05028000069446 Predictor: ElasticNet Pearson Correlation: 0.08097211632020343 Spearman Correlation: 0.10028966615370673 Coefficient of Determination: 0.006553046943001406 RMSE: 0.44732019260049294 NRMSE: 0.15933043369563415 MAPE: 111.75451922457312 Pearson Correlation: 0.05263185104833814 Spearman Correlation: 0.08854605023683378 Coefficient of Determination: -0.0016097471941185493 RMSE: 0.6486175279217344 NRMSE: 0.1565310056041061 MAPE: 115.04813681163985 Predictor: RandomForests Pearson Correlation: 0.08097211632020365 Spearman Correlation: 0.10028966615370673 Coefficient of Determination: 0.006552554918734965 RMSE: 0.44732030337256873 NRMSE: 0.1593304731514047 MAPE: 111.72885445197274 Pearson Correlation: 0.05263185104833814 Spearman Correlation: 0.08854605023683378 Coefficient of Determination: -0.0015551878133204244 RMSE: 0.6485998620330368 NRMSE: 0.15652674229143923 MAPE: 115.02083080425555 Protein: CCND1 x_train_column_count: 5 x_train columns: ['CCND1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.033765403317117366 Spearman Correlation: 0.025958861188395466 Coefficient of Determination: -3.775027505438368e+26 RMSE: 4422502936030.035 NRMSE: 2785512783451.347 MAPE: 1.850589322429867e+16 Pearson Correlation: 0.04927922008638433 Spearman Correlation: 0.04136845512912142 Coefficient of Determination: -2.6537128255827578e+26 RMSE: 4495432039683.179 NRMSE: 2872076794114.0405 MAPE: 7350331998527769.0 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.838630392216658e-06 RMSE: 0.22761920559404059 NRMSE: 0.14336592108865803 MAPE: 687.1433627712928 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002779853082355732 RMSE: 0.2763422407553681 NRMSE: 0.17655169289644146 MAPE: 267.74516731217955 Protein: ERBB2
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['ERBB2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1441441352268649e+24 RMSE: 1099511627775.6736 NRMSE: 187319901830.70236 MAPE: 1958610543028258.5 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.6056103460226817e+24 RMSE: 1099511627775.7933 NRMSE: 243281696598.25055 MAPE: 1819246456706474.5 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.24194547875112e-05 RMSE: 1.0279472750268104 NRMSE: 0.17512773651580327 MAPE: 594.677870571246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016766973979266186 RMSE: 0.8749645614727234 NRMSE: 0.19359764608313385 MAPE: 554.1014733883659 Protein: ERBB3
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['ERBB3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: -0.015450816657091512 Spearman Correlation: -0.008652955563185624 Coefficient of Determination: -5.477757320616561e+24 RMSE: 1097466022976.0339 NRMSE: 296174580546.0667 MAPE: 1109784902967580.2 Pearson Correlation: -0.1400069882410277 Spearman Correlation: -0.16229163166039945 Coefficient of Determination: -6.849522748126303e+24 RMSE: 1091275469652.5831 NRMSE: 527992234354.17505 MAPE: 1089598723772034.4 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: RandomForests Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.966491893035105e-05 RMSE: 0.4689148210412275 NRMSE: 0.1265466515829915 MAPE: 247.0836923393686 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05205269876691898 RMSE: 0.4276839812194808 NRMSE: 0.20692650675402102 MAPE: 237.98211644201643
Unnormalized
scenario = Scenario.selfmRNA_Polynomial
normalizeTechnique = NormalizeTechnique.UN
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 10.7401 | 141.1933 | 314.4482 | 0.0000 | 0.0 | 0.000 | 2.9988 | 9.4249 | 0.0 | 0.0000 | ... | 74.1138 | 533.3625 | 1053.4444 | 94.6772 | 881.2262 | 5343.4779 | 934.3482 | 508.0867 | 52.2652 | 0.8568 |
| TCGA-A1-A0SH-01 | 3.0048 | 79.8003 | 95.7054 | 0.0000 | 0.0 | 0.000 | 0.3612 | 3.9727 | 0.0 | 0.0000 | ... | 87.7601 | 581.0946 | 801.3977 | 19.8634 | 1353.2389 | 5464.9614 | 1312.7898 | 1001.1151 | 455.7746 | 0.0000 |
| TCGA-A1-A0SJ-01 | 4.9419 | 134.8733 | 63.6488 | 0.3658 | 0.0 | 0.000 | 0.3658 | 4.7554 | 0.0 | 0.7316 | ... | 83.7677 | 2731.4129 | 834.3850 | 51.2117 | 1092.6383 | 3032.0988 | 958.3905 | 718.7929 | 43.5299 | 0.0000 |
| TCGA-A1-A0SK-01 | 28.8560 | 1119.1932 | 166.7192 | 0.3152 | 0.0 | 1.891 | 0.0000 | 3.4668 | 0.0 | 0.0000 | ... | 69.0199 | 610.1481 | 1775.6067 | 158.5251 | 1380.7123 | 591.2386 | 1798.9285 | 1335.6445 | 49.4800 | 0.0000 |
| TCGA-A1-A0SQ-01 | 1.0368 | 41.5532 | 75.8447 | 0.0000 | 0.0 | 0.000 | 0.4034 | 5.6480 | 0.0 | 0.0000 | ... | 106.1019 | 617.2466 | 875.0378 | 25.4160 | 969.4402 | 2903.0761 | 715.6833 | 691.4776 | 17.7509 | 0.0000 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 5 x_train columns: ['RB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.2213418604570945 Spearman Correlation: 0.25822552312888836 Coefficient of Determination: 0.04899221919060781 RMSE: 0.21854337078357447 NRMSE: 0.08276590448156577 MAPE: 157.2524202751377 Pearson Correlation: 0.26634223249529176 Spearman Correlation: 0.34992683640620437 Coefficient of Determination: 0.02484386482144918 RMSE: 0.2769604065802188 NRMSE: 0.13682259752114076 MAPE: 113.04851136913767 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 11.716123189182404, tolerance: 0.0026969040165678213 positive)
Pearson Correlation: 0.21657264175698437 Spearman Correlation: 0.25696603687962954 Coefficient of Determination: 0.04690364636672473 RMSE: 0.21878321814460105 NRMSE: 0.08285673855125962 MAPE: 187.3416229243766 Pearson Correlation: 0.2963629926273721 Spearman Correlation: 0.34920007804116676 Coefficient of Determination: 0.03378669454875394 RMSE: 0.27568752608779656 NRMSE: 0.13619377545426978 MAPE: 112.19458522018384 Predictor: RandomForests Pearson Correlation: 0.33833952530122474 Spearman Correlation: 0.33951132296467335 Coefficient of Determination: 0.09802974463538427 RMSE: 0.21283434446696822 NRMSE: 0.08060380400188154 MAPE: 145.37508650343958 Pearson Correlation: 0.27053666597285697 Spearman Correlation: 0.3280678885109722 Coefficient of Determination: 0.025911503927463886 RMSE: 0.27680875151246914 NRMSE: 0.1367476776416065 MAPE: 107.54919913765022 Protein: CDH1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CDH1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 0.7028819574471705 Spearman Correlation: 0.5635039739724257 Coefficient of Determination: 0.4940430461047661 RMSE: 0.8026606751860416 NRMSE: 0.13491682638058958 MAPE: 392.60433727869497 Pearson Correlation: 0.7481655538274606 Spearman Correlation: 0.6559116183786949 Coefficient of Determination: 0.5596129457212726 RMSE: 0.7699979212104067 NRMSE: 0.1247121766723473 MAPE: 146.4126889851061 Predictor: ElasticNet Pearson Correlation: 0.6945104605335696 Spearman Correlation: 0.5636647709924965 Coefficient of Determination: 0.48232397639495506 RMSE: 0.8119031509945165 NRMSE: 0.13647036642874227 MAPE: 430.8580276262829 Pearson Correlation: 0.7489064817399317 Spearman Correlation: 0.6555360452638768 Coefficient of Determination: 0.5599918971040474 RMSE: 0.7696665597721097 NRMSE: 0.12465850794793006 MAPE: 175.78996108793208 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 177.50890579019187, tolerance: 0.06837930598298066 positive)
Pearson Correlation: 0.7132134998444969 Spearman Correlation: 0.5781801023015845 Coefficient of Determination: 0.5084673634826771 RMSE: 0.7911364260120465 NRMSE: 0.13297974988856612 MAPE: 306.3488021625489 Pearson Correlation: 0.7364401058709691 Spearman Correlation: 0.6541481858577574 Coefficient of Determination: 0.5391683231489781 RMSE: 0.787668436688223 NRMSE: 0.1275741693965571 MAPE: 153.69171685807532 Protein: CDH2 x_train_column_count: 5 x_train columns: ['CDH2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.1700163471111268 Spearman Correlation: 0.08642003746493479
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 35.96358863220127, tolerance: 0.007399072171665535 positive)
Coefficient of Determination: 0.02890555828501118 RMSE: 0.36579033232265185 NRMSE: 0.13513405975264858 MAPE: 450.6870467712433 Pearson Correlation: 0.07005345660249043 Spearman Correlation: -0.0064969271290605795 Coefficient of Determination: 0.0015401858249541878 RMSE: 0.37482600564864416 NRMSE: 0.19343861570348567 MAPE: 99.4204218624871 Predictor: ElasticNet Pearson Correlation: 0.16955769925728983 Spearman Correlation: 0.09154430964766565 Coefficient of Determination: 0.028738870296752594 RMSE: 0.36582172486066505 NRMSE: 0.13514565710974855 MAPE: 430.8245530386947 Pearson Correlation: 0.07891723155657177 Spearman Correlation: 0.026402302214418107 Coefficient of Determination: 0.004159956379204743 RMSE: 0.374333946237069 NRMSE: 0.19318467576873047 MAPE: 100.28200663909168 Predictor: RandomForests Pearson Correlation: 0.19320420277460554 Spearman Correlation: 0.1288803543458318 Coefficient of Determination: 0.0365366777677103 RMSE: 0.36435025855834613 NRMSE: 0.13460205276143522 MAPE: 517.4227749514495 Pearson Correlation: 0.044470421820977386 Spearman Correlation: -0.059537927016542085 Coefficient of Determination: -0.006345294971970894 RMSE: 0.3763032160606082 NRMSE: 0.19420096818940402 MAPE: 98.35384313911433 Protein: CDH3
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CDH3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.3067895555372444 Spearman Correlation: 0.3073890823587048 Coefficient of Determination: 0.09411983138673996 RMSE: 0.1987308991969857 NRMSE: 0.13942505696594945 MAPE: 408.42094994631157 Pearson Correlation: 0.4369002879154031 Spearman Correlation: 0.4491805677494879 Coefficient of Determination: 0.1731175637859218 RMSE: 0.186030274158039 NRMSE: 0.14238717970627013 MAPE: 351.44446807906684 Predictor: ElasticNet Pearson Correlation: 0.30639379807743594 Spearman Correlation: 0.3075605346063189 Coefficient of Determination: 0.09387715452161938 RMSE: 0.19875751649351445 NRMSE: 0.13944373105286695 MAPE: 390.28754576099163 Pearson Correlation: 0.44214031861933095 Spearman Correlation: 0.45059018632328557 Coefficient of Determination: 0.17611035482196047 RMSE: 0.18569331306377035 NRMSE: 0.14212927039499915 MAPE: 347.1355890285716 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 10.557361676924994, tolerance: 0.002341177429816801 positive)
Pearson Correlation: 0.3496682668189332 Spearman Correlation: 0.3307097672586625 Coefficient of Determination: 0.12015906260707776 RMSE: 0.19585384588255172 NRMSE: 0.13740658211437934 MAPE: 381.1612404025096 Pearson Correlation: 0.4456557812474688 Spearman Correlation: 0.4605862331967038 Coefficient of Determination: 0.17847992914693533 RMSE: 0.1854260861696705 NRMSE: 0.14192473549354423 MAPE: 326.56281030401266 Protein: PTEN x_train_column_count: 5 x_train columns: ['PTEN', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 0.431825385866713 Spearman Correlation: 0.42917631319632854 Coefficient of Determination: 0.18647316387893564 RMSE: 0.5650528620343053 NRMSE: 0.08835163193406384 MAPE: 522.7363330303626 Pearson Correlation: 0.3903019696744492 Spearman Correlation: 0.40660423373329435 Coefficient of Determination: 0.1400265419663933 RMSE: 0.4605823080097755 NRMSE: 0.1517969507645427 MAPE: 191.4772144369785 Predictor: ElasticNet Pearson Correlation: 0.41285757864838196 Spearman Correlation: 0.4288996648292669 Coefficient of Determination: 0.17045137112184727 RMSE: 0.57058987646987 NRMSE: 0.08921739918221719 MAPE: 531.5065818985258 Pearson Correlation: 0.39943813950853724 Spearman Correlation: 0.40280460442883625 Coefficient of Determination: 0.14784806840518971 RMSE: 0.4584830075689981 NRMSE: 0.15110507137597987 MAPE: 181.09046871493845 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 87.19888355174183, tolerance: 0.021075629727119613 positive)
Pearson Correlation: 0.4510661366641352 Spearman Correlation: 0.4465246887841456 Coefficient of Determination: 0.199567912918601 RMSE: 0.5604867911010524 NRMSE: 0.08763768135424163 MAPE: 529.5491842611985 Pearson Correlation: 0.3866330546263069 Spearman Correlation: 0.3981096259406254 Coefficient of Determination: 0.13840788698258943 RMSE: 0.4610155617120034 NRMSE: 0.15193974085821746 MAPE: 202.21690083920234 Protein: BRCA2 x_train_column_count: 5 x_train columns: ['BRCA2', '2', '1/2', '3', '1/3'] Predictor:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.9889756429904537, tolerance: 0.002096995577721637 positive)
Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.05916599633137328 Spearman Correlation: 0.030167616186077727 Coefficient of Determination: 0.003500615121883932 RMSE: 0.19726504319823776 NRMSE: 0.1276086082816282 MAPE: 131.66859190454846 Pearson Correlation: -0.08998303275032375 Spearman Correlation: -0.08377973341598928 Coefficient of Determination: -0.039514379553242884 RMSE: 0.188349144688779 NRMSE: 0.18849994464449463 MAPE: 116.6880243393503 Predictor: ElasticNet Pearson Correlation: 0.039634508188255445 Spearman Correlation: 0.02862609568892118 Coefficient of Determination: 0.001568501506980735 RMSE: 0.19745618928068212 NRMSE: 0.12773225860083198 MAPE: 130.95536979076738 Pearson Correlation: -0.07505176900568641 Spearman Correlation: -0.04160818652840198 Coefficient of Determination: -0.018424962018802615 RMSE: 0.18642876366614167 NRMSE: 0.1865780260870113 MAPE: 114.15960665500879 Predictor: RandomForests Pearson Correlation: 0.3257942376102405 Spearman Correlation: 0.25500959044958793 Coefficient of Determination: 0.04912356112431371 RMSE: 0.19269642508331206 NRMSE: 0.12465321897410636 MAPE: 133.9139947559344 Pearson Correlation: -0.03975777992192093 Spearman Correlation: -0.01067431406904905 Coefficient of Determination: -0.021845741347306546 RMSE: 0.18674159822161593 NRMSE: 0.18689111111050435 MAPE: 115.13583396986726 Protein: CDKN2A x_train_column_count:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
5 x_train columns: ['CDKN2A', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 0.5907236172060981 Spearman Correlation: 0.48755951209223647 Coefficient of Determination: 0.34895439192505673 RMSE: 0.5185897933793998 NRMSE: 0.11723517426910811 MAPE: 211.32007676061787 Pearson Correlation: 0.6897804146460538 Spearman Correlation: 0.5414642473904986 Coefficient of Determination: 0.47047210293185493 RMSE: 0.5434836382263442 NRMSE: 0.14676846833009566 MAPE: 384.23489236858524 Predictor: ElasticNet Pearson Correlation: 0.5807335330772482 Spearman Correlation: 0.4874611353110631 Coefficient of Determination: 0.3372259477509618 RMSE: 0.5232400841969794 NRMSE: 0.11828644381077864 MAPE: 204.82405928012955 Pearson Correlation: 0.44900983569822134 Spearman Correlation: 0.49707345624817095 Coefficient of Determination: 0.16176507604716917 RMSE: 0.6837934354122753 NRMSE: 0.18465931283075218 MAPE: 401.05225067736853 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 73.95148494627665, tolerance: 0.02218251593097602 positive)
Pearson Correlation: 0.6031166548470466 Spearman Correlation: 0.5142043852276713 Coefficient of Determination: 0.36338257195258583 RMSE: 0.5128112215701984 NRMSE: 0.11592883950948307 MAPE: 222.42155552398435 Pearson Correlation: 0.6736173012257093 Spearman Correlation: 0.5183481629817652 Coefficient of Determination: 0.4416816519711879 RMSE: 0.5580627074004604 NRMSE: 0.15070556505548485 MAPE: 518.4052407636528 Protein: TP53
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['TP53', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.40825049665663143 Spearman Correlation: 0.30254091649769904 Coefficient of Determination: 0.16666846802038626 RMSE: 0.4133653750427039 NRMSE: 0.09934279621309876 MAPE: 727.2370285540259 Pearson Correlation: 0.3310126628813634 Spearman Correlation: 0.25681884694176177 Coefficient of Determination: 0.08780578703372244 RMSE: 0.4017461599405314 NRMSE: 0.1444662375276103 MAPE: 1141.8515568256648 Predictor: ElasticNet Pearson Correlation: 0.39770447532169484 Spearman Correlation: 0.3011887491446519 Coefficient of Determination: 0.158165586653207 RMSE: 0.41546890543423076 NRMSE: 0.09984833103442221 MAPE: 664.567403916766 Pearson Correlation: 0.3268936703125723 Spearman Correlation: 0.2869232270022437 Coefficient of Determination: 0.08861381046046934 RMSE: 0.4015681867504992 NRMSE: 0.14440223911341624 MAPE: 1101.9539671233056 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 46.50907669857116, tolerance: 0.011010946742365387 positive)
Pearson Correlation: 0.45492238975734456 Spearman Correlation: 0.34634270161779623 Coefficient of Determination: 0.20619176236443626 RMSE: 0.40344374717794973 NRMSE: 0.09695836269597446 MAPE: 668.2271002590516 Pearson Correlation: 0.3281714473563291 Spearman Correlation: 0.28867684750577033 Coefficient of Determination: 0.08991864560113616 RMSE: 0.40128062042132523 NRMSE: 0.1442988314651103 MAPE: 1228.5562057380778 Protein: CTNNB1 x_train_column_count: 5 x_train columns: ['CTNNB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 0.16669869655140335 Spearman Correlation: 0.1674404200049243 Coefficient of Determination: 0.027788455431936532 RMSE: 0.7269196851120139 NRMSE: 0.14650617431767618 MAPE: 635.2645087426085 Pearson Correlation: -0.06862200826888845 Spearman Correlation: -0.06972002731440836 Coefficient of Determination: -0.06301650543338178 RMSE: 0.7742576720152226 NRMSE: 0.19209489207939826 MAPE: 387.5664091476911 Predictor: ElasticNet Pearson Correlation: 0.1531239351461972 Spearman Correlation: 0.15942691630966338 Coefficient of Determination: 0.023444086928415486 RMSE: 0.7285420104899528 NRMSE: 0.14683314398088415 MAPE: 636.3785892476211 Pearson Correlation: -0.06793400941130642 Spearman Correlation: -0.07922153936201348 Coefficient of Determination: -0.06011223617142991 RMSE: 0.7731992732345406 NRMSE: 0.19183230120442135 MAPE: 355.4159131695605 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 142.5154896028087, tolerance: 0.02918679256026189 positive)
Pearson Correlation: 0.3101921197195444 Spearman Correlation: 0.30218639412689285 Coefficient of Determination: 0.08112196149899753 RMSE: 0.7066998169279368 NRMSE: 0.14243098472860852 MAPE: 629.3479296651823 Pearson Correlation: -0.06030718098076416 Spearman Correlation: -0.04014575748895606 Coefficient of Determination: -0.07580801753149946 RMSE: 0.7789021484733238 NRMSE: 0.19324719606840765 MAPE: 401.6201927378137 Protein: CCNE1 x_train_column_count: 5 x_train columns: ['CCNE1', '2', '1/2', '3', '1/3'] Predictor: Zero
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 17.372010503985255, tolerance: 0.012562459394718587 positive)
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.8555110749382004 Spearman Correlation: 0.7131677459763455 Coefficient of Determination: 0.7318991993419153 RMSE: 0.2504374356226374 NRMSE: 0.0604381194639181 MAPE: 56.28073662255251 Pearson Correlation: 0.8511106955505301 Spearman Correlation: 0.710345332162716 Coefficient of Determination: 0.7233952514883231 RMSE: 0.2824466743386235 NRMSE: 0.10060433636282226 MAPE: 46.01323589068919 Predictor: ElasticNet Pearson Correlation: 0.8531200006986577 Spearman Correlation: 0.7131090453751777 Coefficient of Determination: 0.7278040408281764 RMSE: 0.25234286496573605 NRMSE: 0.0608979571314854 MAPE: 58.50607091713097 Pearson Correlation: 0.843013047475431 Spearman Correlation: 0.7106623744024974 Coefficient of Determination: 0.7097939965853266 RMSE: 0.28930760227469576 NRMSE: 0.10304812191440632 MAPE: 47.78874426011071 Predictor: RandomForests Pearson Correlation: 0.8561762547193342 Spearman Correlation: 0.7204410839077513 Coefficient of Determination: 0.7277435645147519 RMSE: 0.252370896092054 NRMSE: 0.06090472188914593 MAPE: 54.30224746581206 Pearson Correlation: 0.8346467335894345 Spearman Correlation: 0.7068181224371397 Coefficient of Determination: 0.6943052206560596 RMSE: 0.2969276634196074 NRMSE: 0.10576230219754493 MAPE: 44.97926614243301 Protein: CCND1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CCND1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 0.4240483429560254 Spearman Correlation: 0.3731637827526827 Coefficient of Determination: 0.17981699716375077 RMSE: 0.21635186164958384 NRMSE: 0.13006448260185874 MAPE: 338.2332721926534 Pearson Correlation: 0.41214395918890734 Spearman Correlation: 0.47168081162813386 Coefficient of Determination: 0.1348869238545698 RMSE: 0.21852792076782074 NRMSE: 0.15563779896289437 MAPE: 1175.3920523602162 Predictor: ElasticNet Pearson Correlation: 0.4235017969782606 Spearman Correlation: 0.3731637827526827 Coefficient of Determination: 0.17935112215611204 RMSE: 0.21641329831431505 NRMSE: 0.1301014165480246 MAPE: 324.031207540678 Pearson Correlation: 0.3347766897838311 Spearman Correlation: 0.42930445810164863 Coefficient of Determination: 0.03980708411485101 RMSE: 0.2302235488115026 NRMSE: 0.16396754373789427 MAPE: 1165.032528989541 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 12.592370600666552, tolerance: 0.0030646775987981157 positive)
Pearson Correlation: 0.46790745118444743 Spearman Correlation: 0.40012513159012253 Coefficient of Determination: 0.21270897982633408 RMSE: 0.21196926946298006 NRMSE: 0.12742979491828887 MAPE: 315.092281675616 Pearson Correlation: 0.5050841544101987 Spearman Correlation: 0.4767786498993165 Coefficient of Determination: 0.25320689683490005 RMSE: 0.20303487601183506 NRMSE: 0.14460349553574944 MAPE: 1138.0620619613712 Protein: ERBB2 x_train_column_count: 5 x_train columns: ['ERBB2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 0.8295019529859392 Spearman Correlation: 0.6137508967340191 Coefficient of Determination: 0.6880734900074873 RMSE: 0.5691919472844329 NRMSE: 0.09697121612423683 MAPE: 627.8328829503309 Pearson Correlation: 0.8454758073967964 Spearman Correlation: 0.7166081357916302 Coefficient of Determination: 0.7045113719329047 RMSE: 0.4930569193968685 NRMSE: 0.09142535126958437 MAPE: 475.66218868020763 Predictor: ElasticNet Pearson Correlation: 0.8295239502069304 Spearman Correlation: 0.6137508967340191 Coefficient of Determination: 0.6881099201674199 RMSE: 0.5691587081103333 NRMSE: 0.09696555328387027 MAPE: 625.2003540085052 Pearson Correlation: 0.8455802906689118 Spearman Correlation: 0.7166081357916302 Coefficient of Determination: 0.704665590571367 RMSE: 0.4929282367954194 NRMSE: 0.09140149022722407 MAPE: 473.9795570765791 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 87.07430667537731, tolerance: 0.05577498909165362 positive)
Pearson Correlation: 0.8350290813697612 Spearman Correlation: 0.6216057076940171 Coefficient of Determination: 0.6965211280520716 RMSE: 0.5614315762021708 NRMSE: 0.09564910918823293 MAPE: 467.4310756077953 Pearson Correlation: 0.8040149199599619 Spearman Correlation: 0.712575091635544 Coefficient of Determination: 0.6363330370305993 RMSE: 0.5469890053467115 NRMSE: 0.1014257380579847 MAPE: 341.96897482700155 Protein: ERBB3 x_train_column_count: 5 x_train columns: ['ERBB3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.46675328471360444 Spearman Correlation: 0.4461608353851102 Coefficient of Determination: 0.2178586287909392 RMSE: 0.40605605185318683 NRMSE: 0.10958287392778428 MAPE: 243.94956827596417 Pearson Correlation: 0.44724728047352735 Spearman Correlation: 0.47324952839944506 Coefficient of Determination: 0.19165947051530752 RMSE: 0.41853777623087274 NRMSE: 0.16794177590157644 MAPE: 255.74027415211873 Predictor: ElasticNet Pearson Correlation: 0.4651161757869773 Spearman Correlation: 0.4461608353851102 Coefficient of Determination: 0.21633111389739657 RMSE: 0.4064523703105084 NRMSE: 0.10968982890443274 MAPE: 241.10985765966205 Pearson Correlation: 0.44940242413077447 Spearman Correlation: 0.47324952839944506 Coefficient of Determination: 0.19440523960031475 RMSE: 0.4178263275203836 NRMSE: 0.16765630116861824 MAPE: 250.48047987296553 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 44.47775232123644, tolerance: 0.011320379923715432 positive)
Pearson Correlation: 0.4888755048912228 Spearman Correlation: 0.4625210017746683 Coefficient of Determination: 0.23742555962963663 RMSE: 0.4009447034394504 NRMSE: 0.10820346769490789 MAPE: 242.397265680779 Pearson Correlation: 0.4306135180238071 Spearman Correlation: 0.47175791537273415 Coefficient of Determination: 0.17674257303902818 RMSE: 0.4223819140865897 NRMSE: 0.16948426830002475 MAPE: 270.9861842046686 Fold: 2 Protein: RB1 x_train_column_count: 5 x_train columns: ['RB1', '2', '1/2', '3', '1/3']
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.2683166911975859 Spearman Correlation: 0.31585509762975117 Coefficient of Determination: 0.0719938467752208 RMSE: 0.22642235800487165 NRMSE: 0.08280513385198641 MAPE: 203.4032238735013 Pearson Correlation: 0.07653190674445745 Spearman Correlation: 0.09472734367378793 Coefficient of Determination: -0.043284565962334653 RMSE: 0.25014817320966354 NRMSE: 0.1433168940482311 MAPE: 355.98097534381185 Predictor: ElasticNet Pearson Correlation: 0.2629758436782107 Spearman Correlation: 0.3160265111277737 Coefficient of Determination: 0.06915627308872063 RMSE: 0.22676826074226505 NRMSE: 0.08293163426794363 MAPE: 212.63487629716246 Pearson Correlation: 0.10106693309465656 Spearman Correlation: 0.10746268656716418 Coefficient of Determination: -0.031014680428953056 RMSE: 0.24867284837736997 NRMSE: 0.1424716391340594 MAPE: 374.4572706635977 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 8.153118332949987, tolerance: 0.0029666208701464043 positive)
Pearson Correlation: 0.35614812748472296 Spearman Correlation: 0.4067656823580468 Coefficient of Determination: 0.11704931686327302 RMSE: 0.22085747588364613 NRMSE: 0.08076999556891681 MAPE: 212.91843709848632 Pearson Correlation: 0.11262387941505292 Spearman Correlation: 0.13200550644686648 Coefficient of Determination: -0.01822745511322843 RMSE: 0.2471259465963582 NRMSE: 0.14158537578139255 MAPE: 371.2748514968058 Protein: CDH1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CDH1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.719115848740167 Spearman Correlation: 0.5459611353215025 Coefficient of Determination: 0.5171276039092907 RMSE: 0.7786921093547367 NRMSE: 0.12492052768985909 MAPE: 343.78709441544976 Pearson Correlation: 0.67732541658076 Spearman Correlation: 0.6866549604916594 Coefficient of Determination: 0.4292313300258762 RMSE: 0.8692845339200117 NRMSE: 0.15437480623690494 MAPE: 174.48980072321487 Predictor: ElasticNet Pearson Correlation: 0.712846537918506 Spearman Correlation: 0.547991517356624 Coefficient of Determination: 0.5080578956590054 RMSE: 0.7859711075674768 NRMSE: 0.12608825019130132 MAPE: 374.70908204937285 Pearson Correlation: 0.6728452875449509 Spearman Correlation: 0.6868207979709298 Coefficient of Determination: 0.4232989638513013 RMSE: 0.873790373011056 NRMSE: 0.1551749907673692 MAPE: 196.26219039913795 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 166.66386304697383, tolerance: 0.0674331510902594 positive)
Pearson Correlation: 0.7350304267267253 Spearman Correlation: 0.5613110030188662 Coefficient of Determination: 0.540044664604505 RMSE: 0.7599891897018013 NRMSE: 0.12192013952062264 MAPE: 218.35511995481855 Pearson Correlation: 0.6514395210092938 Spearman Correlation: 0.6950490242779388 Coefficient of Determination: 0.3838687429160702 RMSE: 0.903167935022137 NRMSE: 0.16039210353793942 MAPE: 213.09240930445145 Protein: CDH2 x_train_column_count: 5 x_train columns: ['CDH2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.1663577878410326 Spearman Correlation: 0.07700220873120109 Coefficient of Determination: 0.027674913575362114 RMSE: 0.3629690049532287 NRMSE: 0.13152003947866828 MAPE: 492.2931159513243 Pearson Correlation: 0.1129001011027001 Spearman Correlation: 0.08746463759633209 Coefficient of Determination: 0.008439755150813744 RMSE: 0.38544348449671867 NRMSE: 0.20306057123267077 MAPE: 126.50861466957349 Predictor: ElasticNet Pearson Correlation: 0.16587081301255124 Spearman Correlation: 0.08301834229114845 Coefficient of Determination: 0.0275065327101357 RMSE: 0.3630004318855506 NRMSE: 0.13153142687352368 MAPE: 431.30407810691355 Pearson Correlation: 0.11410437968582157 Spearman Correlation: 0.11956882255389718 Coefficient of Determination: 0.00955379183610483 RMSE: 0.38522689712287417 NRMSE: 0.20294646797856578 MAPE: 124.38986926018771 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 35.40426421475022, tolerance: 0.007276153902921154 positive)
Pearson Correlation: 0.19454388271802053 Spearman Correlation: 0.14521057380373123 Coefficient of Determination: 0.03651527365429952 RMSE: 0.36131518380565425 NRMSE: 0.1309207854937511 MAPE: 424.33550523362396 Pearson Correlation: 0.1111368680265401 Spearman Correlation: 0.0855059428777579 Coefficient of Determination: 0.008862541012281122 RMSE: 0.38536130218298686 NRMSE: 0.20301727568288766 MAPE: 125.13506014316602 Protein: CDH3 x_train_column_count: 5 x_train columns: ['CDH3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.3810899170763149 Spearman Correlation: 0.3540881869011645 Coefficient of Determination: 0.14522952489723262 RMSE: 0.19203273880085628 NRMSE: 0.14452352155882403 MAPE: 435.75151411816336 Pearson Correlation: 0.16230469176015258 Spearman Correlation: 0.2577846063798654 Coefficient of Determination: -0.17958953859817228 RMSE: 0.2149668963280468 NRMSE: 0.1768838116745222 MAPE: 723.6848395462811 Predictor: ElasticNet Pearson Correlation: 0.3804474889164988 Spearman Correlation: 0.35419411920716626 Coefficient of Determination: 0.14474026202715562 RMSE: 0.19208768983791402 NRMSE: 0.14456487761841308 MAPE: 422.61312314848783 Pearson Correlation: 0.1703831536493208 Spearman Correlation: 0.25696029655643354 Coefficient of Determination: -0.174899296180844 RMSE: 0.21453909875148677 NRMSE: 0.17653180181970443 MAPE: 663.9614987314773 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 9.899701231319945, tolerance: 0.002316729479435792 positive)
Pearson Correlation: 0.4204718415225781 Spearman Correlation: 0.381566465141858 Coefficient of Determination: 0.17586554340406868 RMSE: 0.18855999399025514 NRMSE: 0.14190993955901884 MAPE: 407.9762976268253 Pearson Correlation: 0.1528224579371404 Spearman Correlation: 0.25482125674289846 Coefficient of Determination: -0.20420158161696267 RMSE: 0.2171979524042062 NRMSE: 0.1787196185338651 MAPE: 749.9943127972166 Protein: PTEN x_train_column_count: 5 x_train columns: ['PTEN', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Pearson Correlation: 0.44040183382680614 Spearman Correlation: 0.4512334797529042 Coefficient of Determination: 0.19395377523801394 RMSE: 0.5600028910701158 NRMSE: 0.08756201877415618 MAPE: 371.3782376991439 Pearson Correlation: 0.40931935855641755 Spearman Correlation: 0.32531460345332164 Coefficient of Determination: 0.037180839002523 RMSE: 0.5020286525636078 NRMSE: 0.1683755877929997 MAPE: 838.8059069080425 Predictor: ElasticNet Pearson Correlation: 0.42215327435935684 Spearman Correlation: 0.4509122731754614 Coefficient of Determination: 0.178213384108022 RMSE: 0.5654442953021833 NRMSE: 0.08841283641657155 MAPE: 403.8274215026285 Pearson Correlation: 0.3626870300787154 Spearman Correlation: 0.32171495463857186 Coefficient of Determination: 0.09257569456726922 RMSE: 0.48737286549497055 NRMSE: 0.16346017758752704 MAPE: 800.2307971947087 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 85.72329937138515, tolerance: 0.020892714789331884 positive)
Pearson Correlation: 0.4637617822650544 Spearman Correlation: 0.47168364395156603 Coefficient of Determination: 0.21156824157538845 RMSE: 0.5538502419387915 NRMSE: 0.08659999092155289 MAPE: 387.81209059025514 Pearson Correlation: 0.32841119653119666 Spearman Correlation: 0.3189015377155911 Coefficient of Determination: 0.06684765308756402 RMSE: 0.4942337723820691 NRMSE: 0.16576125985446377 MAPE: 807.5427410723374 Protein: BRCA2 x_train_column_count: 5 x_train columns: ['BRCA2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.06365300443558393 Spearman Correlation: 0.07376635547985072 Coefficient of Determination: 0.004051704973676351 RMSE: 0.1949282954014861 NRMSE: 0.12557790008148564 MAPE: 122.91087118346307 Pearson Correlation: -0.04465424020458227 Spearman Correlation: -0.11183299190322897 Coefficient of Determination: -0.04105518666650099 RMSE:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.07671935886707715, tolerance: 0.0020487419647026942 positive)
0.1971135461541932 NRMSE: 0.1334255353605445 MAPE: 114.18780477228687 Predictor: ElasticNet Pearson Correlation: 0.0442214371536787 Spearman Correlation: 0.057472501576392276 Coefficient of Determination: 0.001955030601422436 RMSE: 0.19513336944484688 NRMSE: 0.12571001413744365 MAPE: 115.78208636897848 Pearson Correlation: -0.14067796152839718 Spearman Correlation: -0.13059701492537315 Coefficient of Determination: -0.03202889399155984 RMSE: 0.1962571660296817 NRMSE: 0.13284585436543067 MAPE: 111.60170859999393 Predictor: RandomForests Pearson Correlation: 0.3065859879492729 Spearman Correlation: 0.2519146540417206 Coefficient of Determination: 0.04415935545666705 RMSE: 0.19096300303904637 NRMSE: 0.12302335515480521 MAPE: 126.69248816875668 Pearson Correlation: 0.07896059153515289 Spearman Correlation: 0.05877387777856347 Coefficient of Determination: -0.011046221373264498 RMSE: 0.19425182166951882 NRMSE: 0.13148844311664884 MAPE: 123.9361936403578 Protein: CDKN2A x_train_column_count: 5 x_train columns: ['CDKN2A', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.5982403348374242 Spearman Correlation: 0.47664576331236586 Coefficient of Determination: 0.35789149822639343 RMSE: 0.531549449047174 NRMSE: 0.12016490314166926 MAPE: 232.40711145765033 Pearson Correlation: 0.6931678011533898 Spearman Correlation: 0.5752024192761682 Coefficient of Determination: 0.4699990690062311 RMSE: 0.4902665538751587 NRMSE: 0.13244719955564047 MAPE: 219.7390195634593 Predictor: ElasticNet Pearson Correlation: 0.5871803461498191 Spearman Correlation: 0.4763359481382727 Coefficient of Determination: 0.3447780232902339 RMSE: 0.5369498063034277 NRMSE: 0.12138573670248166 MAPE: 224.35966384542692 Pearson Correlation: 0.6854494515876937 Spearman Correlation: 0.5751146229636134 Coefficient of Determination: 0.4513985708057051 RMSE: 0.49879537472710356 NRMSE: 0.13475128990898627 MAPE: 206.24807842203916 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 77.5500301455217, tolerance: 0.023629428078437084 positive)
Pearson Correlation: 0.6040027516191304 Spearman Correlation: 0.4861296560239233 Coefficient of Determination: 0.36433447381499207 RMSE: 0.528875917565927 NRMSE: 0.11956051035739278 MAPE: 257.31980271784846 Pearson Correlation: 0.6768078158008014 Spearman Correlation: 0.569489990183919 Coefficient of Determination: 0.44303391666723235 RMSE: 0.5025836141073503 NRMSE: 0.13577469583621957 MAPE: 209.43106914074932 Protein: TP53 x_train_column_count: 5 x_train columns: ['TP53', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 0.38740230593596026 Spearman Correlation: 0.31401612825139574 Coefficient of Determination: 0.15008054664449932 RMSE: 0.41976654263394925 NRMSE: 0.11243244747126002 MAPE: 489.0557683526419 Pearson Correlation: 0.4297590556503425 Spearman Correlation: 0.2850746268656717 Coefficient of Determination: 0.1803904764392431 RMSE: 0.3706242374695972 NRMSE: 0.12205639304119782 MAPE: 1982.4513495892643 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 47.97641081648435, tolerance: 0.011132998655991638 positive)
Pearson Correlation: 0.37801770086930747 Spearman Correlation: 0.3148478944433799 Coefficient of Determination: 0.14287618047999162 RMSE: 0.42154186987578557 NRMSE: 0.11290796032564232 MAPE: 483.65019841297726 Pearson Correlation: 0.41421501531781635 Spearman Correlation: 0.2878841088674276 Coefficient of Determination: 0.16976819696102452 RMSE: 0.3730181826791311 NRMSE: 0.12284478270348463 MAPE: 1758.8095658549764 Predictor: RandomForests Pearson Correlation: 0.41836058695215167 Spearman Correlation: 0.35514670974367946 Coefficient of Determination: 0.17435957320281414 RMSE: 0.4137275203739926 NRMSE: 0.11081492443390721 MAPE: 505.56269271180315 Pearson Correlation: 0.46793918082121677 Spearman Correlation: 0.28068144997753247 Coefficient of Determination: 0.21780722524703144 RMSE: 0.36206556235238085 NRMSE: 0.11923779428696882 MAPE: 1845.1105999300512 Protein: CTNNB1 x_train_column_count: 5 x_train columns: ['CTNNB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.16185847738193468 Spearman Correlation: 0.14077221979078625 Coefficient of Determination: 0.026198166700398096 RMSE: 0.7154239395299327 NRMSE: 0.14072068047402295 MAPE: 624.2351630498998
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 138.1937221734414, tolerance: 0.028224784501103505 positive)
Pearson Correlation: -0.03485771900023347 Spearman Correlation: 0.10932104184957567 Coefficient of Determination: -14.955555561227282 RMSE: 3.0618753101955978 NRMSE: 0.7620206839540077 MAPE: 662.9663384571437 Predictor: ElasticNet Pearson Correlation: 0.1457226935613666 Spearman Correlation: 0.12064829720111092 Coefficient of Determination: 0.021233842738420328 RMSE: 0.7172451937028101 NRMSE: 0.14107891300212633 MAPE: 613.7139640417869 Pearson Correlation: -0.03128986116750801 Spearman Correlation: 0.12263681592039803 Coefficient of Determination: -3.905517794587313 RMSE: 1.6977508759323205 NRMSE: 0.4225257897843062 MAPE: 554.41879091627 Predictor: RandomForests Pearson Correlation: 0.2841720487354023 Spearman Correlation: 0.29091199686053093 Coefficient of Determination: 0.06884976897217243 RMSE: 0.6995810745496404 NRMSE: 0.13760445998222667 MAPE: 631.5635683552986 Pearson Correlation: 0.0711397534338752 Spearman Correlation: 0.14282184909213674 Coefficient of Determination: -0.1285956971281863 RMSE: 0.8143305550615784 NRMSE: 0.20266557702933685 MAPE: 489.1762361982494 Protein: CCNE1 x_train_column_count: 5 x_train columns: ['CCNE1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.8566754755043566 Spearman Correlation: 0.7058914925026646 Coefficient of Determination: 0.7338928703306156 RMSE: 0.2645292089122099 NRMSE: 0.06383889010116801 MAPE: 58.7577486746141 Pearson Correlation: 0.8450358975229021 Spearman Correlation: 0.7529704419081066 Coefficient of Determination: 0.7096775403607906 RMSE: 0.22537227372451432 NRMSE: 0.12248559705461136 MAPE: 37.86340607089202 Predictor: ElasticNet Pearson Correlation: 0.8540477546099973 Spearman Correlation: 0.7061567494715154 Coefficient of Determination: 0.7293893648350955 RMSE: 0.2667582183852492 NRMSE: 0.06437681743013471 MAPE: 60.765577901876114 Pearson Correlation: 0.8359512743366482 Spearman Correlation: 0.7531411569602966 Coefficient of Determination: 0.694908737098584 RMSE: 0.23103355149742325 NRMSE: 0.12556239517466034 MAPE: 37.91576257387515 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 19.388986895537506, tolerance: 0.014120986618491432 positive)
Pearson Correlation: 0.8575095771109752 Spearman Correlation: 0.710170393324273 Coefficient of Determination: 0.731498626310561 RMSE: 0.26571656764063023 NRMSE: 0.06412543563497122 MAPE: 67.92450709705875 Pearson Correlation: 0.8348115575626653 Spearman Correlation: 0.7370836679134409 Coefficient of Determination: 0.6935706698419399 RMSE: 0.23153962993186353 NRMSE: 0.12583743929687854 MAPE: 40.584576777916176 Protein: CCND1 x_train_column_count: 5 x_train columns: ['CCND1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 11.993034095858517, tolerance: 0.003060830225233494 positive)
nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.4654018365926985 Spearman Correlation: 0.3945270040292828 Coefficient of Determination: 0.21659886950385687 RMSE: 0.21131220156633992 NRMSE: 0.12703478470040033 MAPE: 506.10511929550273 Pearson Correlation: 0.3284959156772042 Spearman Correlation: 0.3886206223783046 Coefficient of Determination: 0.09563654657237164 RMSE: 0.22388892132960167 NRMSE: 0.17321356171442848 MAPE: 333.4974376888144 Predictor: ElasticNet Pearson Correlation: 0.46538383781242654 Spearman Correlation: 0.3945270040292828 Coefficient of Determination: 0.2165819028377195 RMSE: 0.2113144898220133 NRMSE: 0.12703616033353773 MAPE: 506.3947750872633 Pearson Correlation: 0.3271873403272441 Spearman Correlation: 0.3886206223783046 Coefficient of Determination: 0.09454824949484109 RMSE: 0.22402359306940606 NRMSE: 0.17331775164743304 MAPE: 332.95786042817866 Predictor: RandomForests Pearson Correlation: 0.5008394330542719 Spearman Correlation: 0.4095456699463168 Coefficient of Determination: 0.24675893608299893 RMSE: 0.20720463779582826 NRMSE: 0.12456543614711153 MAPE: 491.2427450802543 Pearson Correlation: 0.3225095409332166 Spearman Correlation: 0.3839087800361473 Coefficient of Determination: 0.09369217172592081 RMSE: 0.22412947187967547 NRMSE: 0.17339966568644818 MAPE: 339.86681722580477 Protein: ERBB2 x_train_column_count: 5 x_train columns: ['ERBB2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 77.47396094071955, tolerance: 0.0518906404354321 positive)
nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.837698884682373 Spearman Correlation: 0.6630955260861322 Coefficient of Determination: 0.7017394213980923 RMSE: 0.5368528964322888 NRMSE: 0.09634314312443494 MAPE: 352.50458798710036 Pearson Correlation: 0.8194159322943808 Spearman Correlation: 0.5166032582187103 Coefficient of Determination: 0.6480018694630416 RMSE: 0.6272316864973962 NRMSE: 0.10685924093180167 MAPE: 1702.1200423341497 Predictor: ElasticNet Pearson Correlation: 0.837706839721896 Spearman Correlation: 0.6630955260861322 Coefficient of Determination: 0.7017527454202224 RMSE: 0.5368409050390685 NRMSE: 0.09634099115967705 MAPE: 354.6856310993404 Pearson Correlation: 0.8197365549231571 Spearman Correlation: 0.5166032582187103 Coefficient of Determination: 0.6484076800431634 RMSE: 0.6268700217080951 NRMSE: 0.10679762538257409 MAPE: 1713.3299182129456 Predictor: RandomForests Pearson Correlation: 0.8389629182616922 Spearman Correlation: 0.6674393366047144 Coefficient of Determination: 0.7023517759520006 RMSE: 0.5363015107514226 NRMSE: 0.09624419194074665 MAPE: 280.29122898726524 Pearson Correlation: 0.8161121853257634 Spearman Correlation: 0.5012523821949281 Coefficient of Determination: 0.6428254688684671 RMSE: 0.63182681426791 NRMSE: 0.10764209657527812 MAPE: 1420.7544425542162 Protein: ERBB3
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['ERBB3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.47398648907382196 Spearman Correlation: 0.4574738577408416 Coefficient of Determination: 0.22466319182452843 RMSE: 0.39195395427557983 NRMSE: 0.10577712254466501 MAPE: 222.73485115695638 Pearson Correlation: 0.3940552848474874 Spearman Correlation: 0.40335089259584433 Coefficient of Determination: 0.15260228091041927 RMSE: 0.4766341227355115 NRMSE: 0.1759063632267286 MAPE: 359.6244856185479 Predictor: ElasticNet Pearson Correlation: 0.47160274018040804 Spearman Correlation: 0.4574811032948563 Coefficient of Determination: 0.22240696886207323 RMSE: 0.3925238311889887 NRMSE: 0.1059309159672022 MAPE: 220.17323599756185 Pearson Correlation: 0.43092842684611915 Spearman Correlation: 0.4416544727343674 Coefficient of Determination: 0.1845679507968465 RMSE: 0.4675578723810665 NRMSE: 0.17255668657659148 MAPE: 352.8760075745136 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 41.47622098059304, tolerance: 0.01064030272396596 positive)
Pearson Correlation: 0.4937926972662044 Spearman Correlation: 0.47011878226411286 Coefficient of Determination: 0.24235048330361064 RMSE: 0.38745745765908807 NRMSE: 0.10456364716462097 MAPE: 216.39720242867085 Pearson Correlation: 0.4334367844462965 Spearman Correlation: 0.44593650227107995 Coefficient of Determination: 0.1860571517329479 RMSE: 0.4671307332863833 NRMSE: 0.17239904682493784 MAPE: 360.2060064779412 Fold: 3 Protein: RB1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['RB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.22370293016622192 Spearman Correlation: 0.28300200023973743 Coefficient of Determination: 0.05004300096495362 RMSE: 0.23448418753881559 NRMSE: 0.08575343312566398 MAPE: 222.58177083895708 Pearson Correlation: 0.22546352137549786 Spearman Correlation: 0.24878365066896097 Coefficient of Determination: 0.030182772510729983 RMSE: 0.21829420783528564 NRMSE: 0.15317386911832215 MAPE: 218.14378156089512 Predictor: ElasticNet Pearson Correlation: 0.2227227174022191 Spearman Correlation: 0.27685397849198035 Coefficient of Determination: 0.04960538339415421 RMSE: 0.23453819134398748 NRMSE: 0.08577318290812884 MAPE: 218.17967515141473 Pearson Correlation: 0.23536659052391973 Spearman Correlation: 0.24265389842766122 Coefficient of Determination: 0.029916842115399023 RMSE: 0.21832413465262313 NRMSE: 0.1531948683305662 MAPE: 211.75636943176053 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 14.536285098898976, tolerance: 0.003113905664439024 positive)
Pearson Correlation: 0.3151554072257596 Spearman Correlation: 0.35257933843613143 Coefficient of Determination: 0.09187356641078293 RMSE: 0.22926340938839693 NRMSE: 0.08384413742992866 MAPE: 273.6666140164905 Pearson Correlation: 0.2300590252443082 Spearman Correlation: 0.28681957460006946 Coefficient of Determination: 0.025303836965301807 RMSE: 0.2188426138644487 NRMSE: 0.15355867764882655 MAPE: 235.88853086302066 Protein: CDH1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CDH1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.7088019281902749 Spearman Correlation: 0.6048193937215675 Coefficient of Determination: 0.5024001734062511 RMSE: 0.8286481965198619 NRMSE: 0.1319461476576959 MAPE: 392.1283530586232 Pearson Correlation: 0.7288660744487512 Spearman Correlation: 0.46525019015199687 Coefficient of Determination: 0.5283183887420474 RMSE: 0.646640930400023 NRMSE: 0.12712635756694513 MAPE: 207.2595200741969 Predictor: ElasticNet Pearson Correlation: 0.702235763456502 Spearman Correlation: 0.6060433571893057 Coefficient of Determination: 0.4930952082409453 RMSE: 0.8363600456119473 NRMSE: 0.1331741099983993 MAPE: 443.97326554710776 Pearson Correlation: 0.717066056775252 Spearman Correlation: 0.46526016533872 Coefficient of Determination: 0.5110953610610816 RMSE: 0.6583408395838083 NRMSE: 0.12942650092081318 MAPE: 226.13536626508198 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 188.69964197483074, tolerance: 0.07424076431120771 positive)
Pearson Correlation: 0.720658592011157 Spearman Correlation: 0.6176291946545054 Coefficient of Determination: 0.5189174241027371 RMSE: 0.8147791240760056 NRMSE: 0.12973776696219955 MAPE: 282.7560913470706 Pearson Correlation: 0.7353301371123111 Spearman Correlation: 0.46500928923410684 Coefficient of Determination: 0.538426650574287 RMSE: 0.63967456230514 NRMSE: 0.1257568046052648 MAPE: 186.00534358064274 Protein: CDH2
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CDH2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.16855572723576362 Spearman Correlation: 0.1406803612692109 Coefficient of Determination: 0.028411033183977197 RMSE: 0.37578326186183203 NRMSE: 0.13616322264723243 MAPE: 674.566445478511 Pearson Correlation: 0.06589219542212628 Spearman Correlation: -0.1540941907006322 Coefficient of Determination: -0.009096836488635462 RMSE: 0.33348499671866716 NRMSE: 0.17571447969242904 MAPE: 121.09304824368306 Predictor: ElasticNet Pearson Correlation: 0.16623901585032105 Spearman Correlation: 0.12602497215392466 Coefficient of Determination: 0.027614525437481552 RMSE: 0.37593726369287184 NRMSE: 0.13621902445571124 MAPE: 416.86837192266444 Pearson Correlation: 0.0883375373211631 Spearman Correlation: -0.14826369406102322 Coefficient of Determination: -0.0003176039051260293 RMSE: 0.3320311530436145 NRMSE: 0.1749484440763455 MAPE: 123.66914128616409 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 38.05884396081426, tolerance: 0.007819420435861616 positive)
Pearson Correlation: 0.23484054897116058 Spearman Correlation: 0.21188831549633352 Coefficient of Determination: 0.04965867579137562 RMSE: 0.3716515529293651 NRMSE: 0.13466611817137658 MAPE: 387.7795348782358 Pearson Correlation: -0.02543600523233715 Spearman Correlation: -0.1851350763201282 Coefficient of Determination: -0.04053330672582822 RMSE: 0.33863970008507494 NRMSE: 0.17843051198446422 MAPE: 642.2830860604364 Protein: CDH3 x_train_column_count: 5 x_train columns: ['CDH3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.34154462766256033 Spearman Correlation: 0.3377537708081206 Coefficient of Determination: 0.11665273268515708 RMSE: 0.19973149071290938 NRMSE: 0.14012704910542556 MAPE: 461.3554743933798 Pearson Correlation: 0.29944974326240315 Spearman Correlation: 0.31923839449369695 Coefficient of Determination: 0.08115585487719823 RMSE: 0.1805246224096269 NRMSE: 0.15702299130152733 MAPE: 186.4528209384206 Predictor: ElasticNet Pearson Correlation: 0.34107458391089396 Spearman Correlation: 0.33756027006723477 Coefficient of Determination: 0.116331855763811 RMSE: 0.19976776376720093 NRMSE: 0.1401524974513112 MAPE: 478.44562127848303 Pearson Correlation: 0.30566998979670895 Spearman Correlation: 0.3179914961533187 Coefficient of Determination: 0.08538642477528147 RMSE: 0.1801085544860889 NRMSE: 0.15666108925699454 MAPE: 185.10204204057158 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 10.732914256940713, tolerance: 0.0024296509859561446 positive)
Pearson Correlation: 0.38429063561532717 Spearman Correlation: 0.366929487494884 Coefficient of Determination: 0.14614884835263475 RMSE: 0.19636853167347101 NRMSE: 0.13776767390236222 MAPE: 480.79342950124743 Pearson Correlation: 0.27910731531306143 Spearman Correlation: 0.30860684283191253 Coefficient of Determination: 0.0655555461704449 RMSE: 0.1820506628174801 NRMSE: 0.15835036385874218 MAPE: 188.00773874257487 Protein: PTEN
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['PTEN', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 0.4249898547319819 Spearman Correlation: 0.41874134433849847 Coefficient of Determination: 0.18061637662511099 RMSE: 0.5696360296125917 NRMSE: 0.08906825574428766 MAPE: 534.7901925418346 Pearson Correlation: 0.38471198664632733 Spearman Correlation: 0.3854038080275315 Coefficient of Determination: 0.14459278497444927 RMSE: 0.43558108621950153 NRMSE: 0.10414122464962022 MAPE: 129.08419584293628 Predictor: ElasticNet Pearson Correlation: 0.40796908192753933 Spearman Correlation: 0.4168387026449609 Coefficient of Determination: 0.16643875088776505 RMSE: 0.5745430417223358 NRMSE: 0.0898355158662084 MAPE: 534.7544859805992 Pearson Correlation: 0.38042954095886333 Spearman Correlation: 0.39053105400316723 Coefficient of Determination: 0.1383687470499848 RMSE: 0.437162882289718 NRMSE: 0.10451940952749916 MAPE: 123.98285074985085 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 88.76975931641083, tolerance: 0.02130541006350738 positive)
Pearson Correlation: 0.4486038694410508 Spearman Correlation: 0.44022040396873025 Coefficient of Determination: 0.19700632373965588 RMSE: 0.5639101003902285 NRMSE: 0.0881729497912952 MAPE: 546.2127871279805 Pearson Correlation: 0.3687177757531359 Spearman Correlation: 0.405227077725146 Coefficient of Determination: 0.1312647338902646 RMSE: 0.43896135222360844 NRMSE: 0.10494939803557798 MAPE: 126.18039299878608 Protein: BRCA2 x_train_column_count: 5 x_train columns: ['BRCA2', '2', '1/2', '3', '1/3'] Predictor:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.07044650515747673 Spearman Correlation: 0.038819247799169836 Coefficient of Determination: 0.004962710088902256 RMSE: 0.18957798042118176 NRMSE: 0.12777207318172012 MAPE: 131.46238054408087 Pearson Correlation: -0.07483672628395809 Spearman Correlation: -0.14997942617738377 Coefficient of Determination: -0.020756482894357386 RMSE: 0.21634231318765273 NRMSE: 0.14880239439548573 MAPE: 125.73713921749139 Predictor: ElasticNet Pearson Correlation: 0.06779259421193758 Spearman Correlation: 0.051063198377028884 Coefficient of Determination: 0.004595262333486505 RMSE: 0.18961298090521245 NRMSE: 0.12779566286443025 MAPE: 129.9188543369656 Pearson Correlation: -0.0778804158690361 Spearman Correlation: -0.1342834698687016 Coefficient of Determination: -0.0212628045515868 RMSE: 0.21639596223138888 NRMSE: 0.14883929474127264 MAPE: 126.50395650716533 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.02781431539379753, tolerance: 0.0019432053784754488 positive)
Pearson Correlation: 0.2847852536520081 Spearman Correlation: 0.24810712888855369 Coefficient of Determination: 0.04356944145348551 RMSE: 0.18586385299339783 NRMSE: 0.1252688195841519 MAPE: 118.71205027999494 Pearson Correlation: -0.008597785420769612 Spearman Correlation: -0.1128019880749639 Coefficient of Determination: -0.012088332481777764 RMSE: 0.2154217773299026 NRMSE: 0.14816924067838874 MAPE: 157.49003513886964 Protein: CDKN2A x_train_column_count: 5 x_train columns: ['CDKN2A', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.6103734629811086 Spearman Correlation: 0.47785313274218516 Coefficient of Determination: 0.3725557643115509 RMSE: 0.5288057027988224 NRMSE: 0.12346042743715503 MAPE: 250.18347918084575
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 77.04157786049568, tolerance: 0.02397725168374273 positive)
Pearson Correlation: 0.6491808050299718 Spearman Correlation: 0.5734759785034726 Coefficient of Determination: 0.41683804244029754 RMSE: 0.5013679707511316 NRMSE: 0.15478619701495216 MAPE: 145.7030726889717 Predictor: ElasticNet Pearson Correlation: 0.5987223416333353 Spearman Correlation: 0.47776443526825035 Coefficient of Determination: 0.3584660093073445 RMSE: 0.5347101142601247 NRMSE: 0.1248389321675674 MAPE: 244.26185462368656 Pearson Correlation: 0.640152129216801 Spearman Correlation: 0.5735258544370878 Coefficient of Determination: 0.4028938551610619 RMSE: 0.5073267520412058 NRMSE: 0.15662583805415264 MAPE: 142.9992909751614 Predictor: RandomForests Pearson Correlation: 0.6245442433394057 Spearman Correlation: 0.4954056886157062 Coefficient of Determination: 0.3895099992678276 RMSE: 0.5216123202164166 NRMSE: 0.12178098622908493 MAPE: 264.10866907885946 Pearson Correlation: 0.6251797457998285 Spearman Correlation: 0.5733110855363031 Coefficient of Determination: 0.38811166296195954 RMSE: 0.5135681488886652 NRMSE: 0.15855273035369863 MAPE: 124.73179501297591 Protein: TP53 x_train_column_count: 5 x_train columns: ['TP53', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.4155346041745014 Spearman Correlation: 0.31710991578017034 Coefficient of Determination: 0.17266900726645962 RMSE: 0.409412422363262 NRMSE: 0.09839279556915694 MAPE: 848.5225093809943 Pearson Correlation: 0.3033220900295202 Spearman Correlation: 0.2572126834499183 Coefficient of Determination: 0.07193976307066918 RMSE: 0.4146762070335783 NRMSE: 0.15463241725687096 MAPE: 488.45305241361723 Predictor: ElasticNet Pearson Correlation: 0.40298111905148165 Spearman Correlation: 0.3180873603828771 Coefficient of Determination: 0.16238538296536897 RMSE: 0.411949037728271 NRMSE: 0.09900241233556142 MAPE: 776.9007789909082 Pearson Correlation: 0.30888998900670306 Spearman Correlation: 0.26355690220576317 Coefficient of Determination: 0.07832096817684286 RMSE: 0.41324812179941683 NRMSE: 0.15409988544515466 MAPE: 468.3454540861867 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 45.85580652090821, tolerance: 0.010899962745861313 positive)
Pearson Correlation: 0.45579562950668484 Spearman Correlation: 0.35162246446507417 Coefficient of Determination: 0.20647455101088552 RMSE: 0.4009606918750126 NRMSE: 0.09636161785027941 MAPE: 818.1588803801528 Pearson Correlation: 0.2984791130638284 Spearman Correlation: 0.26907455660028845 Coefficient of Determination: 0.0658446370334902 RMSE: 0.4160356917475398 NRMSE: 0.15513936799090863 MAPE: 471.9253068166904 Protein: CTNNB1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CTNNB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.1005162914741931 Spearman Correlation: 0.09085021963221147 Coefficient of Determination: 0.010103524851724721 RMSE: 0.7653017725985521 NRMSE: 0.1505314265536098 MAPE: 471.7191934477842 Pearson Correlation: 0.231466434925829 Spearman Correlation: 0.28482400029925564 Coefficient of Determination: 0.029153388185744866 RMSE: 0.6039692008018319 NRMSE: 0.19744653332957332 MAPE: 1235.2571229343844 Predictor: ElasticNet Pearson Correlation: 0.08994892468331928 Spearman Correlation: 0.07474727384339962 Coefficient of Determination: 0.008087620111695726 RMSE: 0.7660806372831046 NRMSE: 0.15068462574411973 MAPE: 467.7171328939582 Pearson Correlation: 0.19016416323060176 Spearman Correlation: 0.27029015324380606 Coefficient of Determination: 0.021661056969868753 RMSE: 0.6062952326837145 NRMSE: 0.19820694781905734 MAPE: 1233.434578309149 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 157.88056748349828, tolerance: 0.03183156097646061 positive)
Pearson Correlation: 0.28283871709746194 Spearman Correlation: 0.27248155031404964 Coefficient of Determination: 0.056911975463831976 RMSE: 0.7469885508843376 NRMSE: 0.14692929797095547 MAPE: 449.58995100093125 Pearson Correlation: 0.20590790949456775 Spearman Correlation: 0.1399556799237513 Coefficient of Determination: 0.026453487374958562 RMSE: 0.6048084295659103 NRMSE: 0.1977208897204584 MAPE: 1426.5538436896502 Protein: CCNE1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CCNE1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.8630694203765396 Spearman Correlation: 0.722510819733616 Coefficient of Determination: 0.7448888243890961 RMSE: 0.26386817583536454 NRMSE: 0.06367936284850848 MAPE: 53.32748223251297 Pearson Correlation: 0.80744749179457 Spearman Correlation: 0.668220301998778 Coefficient of Determination: 0.5732313128686621 RMSE: 0.23837275022551915 NRMSE: 0.10383445146383201 MAPE: 53.322598175180914 Predictor: ElasticNet Pearson Correlation: 0.8579832113482483 Spearman Correlation: 0.724580992574438 Coefficient of Determination: 0.7361203896698352 RMSE: 0.26836457669055447 NRMSE: 0.06476448022070963 MAPE: 55.33896760877223 Pearson Correlation: 0.8153900250266641 Spearman Correlation: 0.6712078704223245 Coefficient of Determination: 0.6074828697190657 RMSE: 0.22860706148018575 NRMSE: 0.09958054688338448 MAPE: 53.00297532909831 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 19.57037050207394, tolerance: 0.014683406463848499 positive)
Pearson Correlation: 0.8619187549822287 Spearman Correlation: 0.7259950117355045 Coefficient of Determination: 0.7407610720135485 RMSE: 0.26599433117465565 NRMSE: 0.06419246836755935 MAPE: 55.85854914077597 Pearson Correlation: 0.766664604749035 Spearman Correlation: 0.6683249776710507 Coefficient of Determination: 0.5125961881082448 RMSE: 0.25474448720884857 NRMSE: 0.11096593074393368 MAPE: 78.77942188814325 Protein: CCND1 x_train_column_count: 5 x_train columns: ['CCND1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 12.8036817928644, tolerance: 0.0032202923923696524 positive)
Pearson Correlation: 0.45322629708748147 Spearman Correlation: 0.40702588796834765 Coefficient of Determination: 0.20541407637162978 RMSE: 0.21808557906130926 NRMSE: 0.13110674337287592 MAPE: 530.2091929900407 Pearson Correlation: 0.38083898600317767 Spearman Correlation: 0.3490592152021846 Coefficient of Determination: 0.1337231917983498 RMSE: 0.1952130108632564 NRMSE: 0.18497816878441473 MAPE: 226.75979696590107 Predictor: ElasticNet Pearson Correlation: 0.45318594314339533 Spearman Correlation: 0.40702588796834765 Coefficient of Determination: 0.2053770696112831 RMSE: 0.2180906575220218 NRMSE: 0.13110979639659365 MAPE: 529.2481648558253 Pearson Correlation: 0.38102407786022835 Spearman Correlation: 0.3490592152021846 Coefficient of Determination: 0.13382939977936148 RMSE: 0.19520104366346516 NRMSE: 0.1849668290141142 MAPE: 223.08033769269002 Predictor: RandomForests Pearson Correlation: 0.48701175981453737 Spearman Correlation: 0.43302356100040734 Coefficient of Determination: 0.2330006116710185 RMSE: 0.2142663758880709 NRMSE: 0.1288107488716445 MAPE: 532.082568823757 Pearson Correlation: 0.3682241478957792 Spearman Correlation: 0.3545397794492318 Coefficient of Determination: 0.12538407752351843 RMSE: 0.19615035827191662 NRMSE: 0.18586637191391944 MAPE: 242.12255902019984 Protein: ERBB2 x_train_column_count: 5 x_train columns: ['ERBB2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 0.8198906222000403 Spearman Correlation: 0.6175542476381123 Coefficient of Determination: 0.6722206323715687 RMSE: 0.5617768589302164 NRMSE: 0.09570793378370555 MAPE: 648.1516672598507 Pearson Correlation: 0.8672275865203017 Spearman Correlation: 0.693151651706485 Coefficient of Determination: 0.7499997126139499 RMSE: 0.5332708775954202 NRMSE: 0.0961957712669421 MAPE: 204.86001207036065 Predictor: ElasticNet Pearson Correlation: 0.8198671202836076 Spearman Correlation: 0.6175542476381123 Coefficient of Determination: 0.6721820948490096 RMSE: 0.5618098824426897 NRMSE: 0.09571355988256465 MAPE: 655.1049570541503 Pearson Correlation: 0.8695756324152848 Spearman Correlation: 0.693151651706485 Coefficient of Determination: 0.7553435696099653 RMSE: 0.5275406506397226 NRMSE: 0.09516210596719146 MAPE: 206.6159729654348 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 84.99340034483325, tolerance: 0.05179983228777935 positive)
Pearson Correlation: 0.8199844751162091 Spearman Correlation: 0.6221157814302832 Coefficient of Determination: 0.6702049561787126 RMSE: 0.5635015323300866 NRMSE: 0.09600176028248235 MAPE: 549.6029276601963 Pearson Correlation: 0.8599440788792835 Spearman Correlation: 0.6851291397706071 Coefficient of Determination: 0.7371530099656668 RMSE: 0.5468007696802719 NRMSE: 0.0986364040840378 MAPE: 202.54669535151447 Protein: ERBB3 x_train_column_count: 5 x_train columns: ['ERBB3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 42.3548040419817, tolerance: 0.010943186691674512 positive)
nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.4783992357233654 Spearman Correlation: 0.44974312792943766 Coefficient of Determination: 0.22886582874070027 RMSE: 0.39604609961336984 NRMSE: 0.14360578983540553 MAPE: 256.330531842488 Pearson Correlation: 0.4078840355431225 Spearman Correlation: 0.4035187471165476 Coefficient of Determination: 0.14548383874634174 RMSE: 0.45732100292469247 NRMSE: 0.12714839867232708 MAPE: 172.75554042289946 Predictor: ElasticNet Pearson Correlation: 0.4766715310863904 Spearman Correlation: 0.4548855783210745 Coefficient of Determination: 0.22721131360482993 RMSE: 0.396470742425197 NRMSE: 0.1437597647551179 MAPE: 254.74960834853334 Pearson Correlation: 0.41791444310245257 Spearman Correlation: 0.4259180289031036 Coefficient of Determination: 0.15474248728640905 RMSE: 0.4548367279250178 NRMSE: 0.126457698734974 MAPE: 173.34105475300927 Predictor: RandomForests Pearson Correlation: 0.4999772787130882 Spearman Correlation: 0.47145580278027005 Coefficient of Determination: 0.24936566604040078 RMSE: 0.39074639408774725 NRMSE: 0.14168412364895636 MAPE: 239.36369085083874 Pearson Correlation: 0.40621408558179806 Spearman Correlation: 0.4286900581558507 Coefficient of Determination: 0.1379264376414061 RMSE: 0.45933884084768656 NRMSE: 0.12770941568017977 MAPE: 166.28747621422403 Fold: 4 Protein: RB1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 11.808684583631027, tolerance: 0.0034032643600116126 positive)
x_train_column_count: 5 x_train columns: ['RB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.2368096909126174 Spearman Correlation: 0.26056685699120063 Coefficient of Determination: 0.05607882971012934 RMSE: 0.24435687829187375 NRMSE: 0.08936398416174435 MAPE: 330.6951786679038 Pearson Correlation: 0.2304077475066958 Spearman Correlation: 0.3083205526253445 Coefficient of Determination: -0.047911313747292406 RMSE: 0.1687860038476987 NRMSE: 0.16171578952947027 MAPE: 108.13669655727347 Predictor: ElasticNet Pearson Correlation: 0.2340604660305349 Spearman Correlation: 0.2562918083646032 Coefficient of Determination: 0.05478425464374537 RMSE: 0.24452438694766818 NRMSE: 0.08942524391006004 MAPE: 310.76265066584654 Pearson Correlation: 0.25253684225820283 Spearman Correlation: 0.3410291898901483 Coefficient of Determination: -0.033138998514430806 RMSE: 0.16759210047040868 NRMSE: 0.16057189712797368 MAPE: 105.958777447897 Predictor: RandomForests Pearson Correlation: 0.3354716659774619 Spearman Correlation: 0.36872499080973353 Coefficient of Determination: 0.09970165657844221 RMSE: 0.23864367620422963 NRMSE: 0.08727460364402781 MAPE: 320.1667713812272 Pearson Correlation: 0.2489237660453198 Spearman Correlation: 0.34152871277647523 Coefficient of Determination: -0.03633114959068817 RMSE: 0.16785081043222436 NRMSE: 0.16081977008414552 MAPE: 112.5832654307591 Protein: CDH1 x_train_column_count: 5 x_train columns: ['CDH1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 0.6976374942939919 Spearman Correlation: 0.6035866452739563 Coefficient of Determination: 0.48669807344479965 RMSE:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 176.10892519509903, tolerance: 0.06736762282826622 positive)
0.801716682581811 NRMSE: 0.1276578265949828 MAPE: 412.4210038005869 Pearson Correlation: 0.7682447980349865 Spearman Correlation: 0.4384269130537788 Coefficient of Determination: 0.5495870152733935 RMSE: 0.7828354916594825 NRMSE: 0.1420187024526473 MAPE: 190.76064460372857 Predictor: ElasticNet Pearson Correlation: 0.6916917762148287 Spearman Correlation: 0.6035344748233071 Coefficient of Determination: 0.47843104472181885 RMSE: 0.8081469539764646 NRMSE: 0.12868172255285892 MAPE: 454.5684737598167 Pearson Correlation: 0.7538709330242077 Spearman Correlation: 0.44892080948640256 Coefficient of Determination: 0.530034244180166 RMSE: 0.7996467255263776 NRMSE: 0.14506852536670978 MAPE: 206.92611432484074 Predictor: RandomForests Pearson Correlation: 0.7087465928671025 Spearman Correlation: 0.6151147498515491 Coefficient of Determination: 0.5020692188726259 RMSE: 0.7896214925151644 NRMSE: 0.12573190225075068 MAPE: 347.50739803543973 Pearson Correlation: 0.7565120663505035 Spearman Correlation: 0.44363902379888376 Coefficient of Determination: 0.5235914114602802 RMSE: 0.8051093072939526 NRMSE: 0.1460595238369349 MAPE: 167.38169848454703 Protein: CDH2 x_train_column_count: 5 x_train columns: ['CDH2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.15026398574798297 Spearman Correlation: 0.06413321051570697 Coefficient of Determination: 0.02257926541287003 RMSE: 0.37505620732118267 NRMSE: 0.13589977799883424 MAPE: 404.53235353696505 Pearson Correlation: -0.11975510659428287 Spearman Correlation: -0.04543448172670482 Coefficient of Determination: -0.14840681147233248 RMSE: 0.35714143038803325 NRMSE: 0.18423787214107612 MAPE: 143.51651416229672 Predictor: ElasticNet Pearson Correlation: 0.1443965136839684 Spearman Correlation: 0.07146547137499795 Coefficient of Determination: 0.02084986944353817 RMSE: 0.37538786287908193 NRMSE: 0.13601995176428797 MAPE: 649.2478334107033 Pearson Correlation: 0.1770330003994188 Spearman Correlation: -0.07145475629371938 Coefficient of Determination: -0.028739436543765873 RMSE: 0.3380220631607555 NRMSE: 0.17437480044197282 MAPE: 153.4161373604435 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 37.90640236138757, tolerance: 0.007742718020581794 positive)
Pearson Correlation: 0.20055119798094626 Spearman Correlation: 0.19593615912826406 Coefficient of Determination: 0.03587804330746036 RMSE: 0.37249596310583954 NRMSE: 0.1349720860590766 MAPE: 884.4514238004294 Pearson Correlation: 0.14230106552976018 Spearman Correlation: -0.007490224344353753 Coefficient of Determination: -0.03569916803924089 RMSE: 0.3391635462241864 NRMSE: 0.17496365514433285 MAPE: 184.4522553877887 Protein: CDH3 x_train_column_count: 5 x_train columns: ['CDH3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.3195749612498045 Spearman Correlation: 0.3314287907228145 Coefficient of Determination: 0.1021281558578141 RMSE: 0.19511235675021443 NRMSE: 0.13905409064684524 MAPE: 282.42096946990387 Pearson Correlation: 0.38650766181378393 Spearman Correlation: 0.3183805284355167 Coefficient of Determination: 0.053699878229681364 RMSE: 0.20213989562928153 NRMSE: 0.17991339483176522 MAPE: 931.3528448805598 Predictor: ElasticNet Pearson Correlation: 0.31933977268159247 Spearman Correlation: 0.331543303710483 Coefficient of Determination: 0.10197492957375787 RMSE: 0.19512900448575288 NRMSE: 0.13906595527584764 MAPE: 278.46787261909867 Pearson Correlation: 0.39322895504360983 Spearman Correlation: 0.3176024638711206 Coefficient of Determination: 0.05692669685443452 RMSE: 0.2017949597241486 NRMSE: 0.17960638670999568 MAPE: 940.730894917012 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 10.248888943276054, tolerance: 0.002281064009154941 positive)
Pearson Correlation: 0.36617036313524487 Spearman Correlation: 0.35439273671084043 Coefficient of Determination: 0.13219802071619624 RMSE: 0.19181736308530117 NRMSE: 0.13670579064476898 MAPE: 233.92392890350578 Pearson Correlation: 0.34102800684308754 Spearman Correlation: 0.30284737435388115 Coefficient of Determination: 0.0275007813258078 RMSE: 0.20491899613737138 NRMSE: 0.1823869164759344 MAPE: 815.7513317408602 Protein: PTEN x_train_column_count: 5 x_train columns: ['PTEN', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 0.4298625093760394 Spearman Correlation: 0.4131794502829669 Coefficient of Determination: 0.18478177696706566 RMSE: 0.5072291587724694 NRMSE: 0.09811768004728982 MAPE: 302.17468125762366 Pearson Correlation: 0.44461337996978284 Spearman Correlation: 0.4701480068330029 Coefficient of Determination: 0.16704276649928995 RMSE: 0.6804568272525775 NRMSE: 0.10639618907866116 MAPE: 669.6515357613198 Predictor: ElasticNet Pearson Correlation: 0.4106795050571748 Spearman Correlation: 0.4125541754874478 Coefficient of Determination: 0.16865757445639518 RMSE: 0.5122208401740507 NRMSE: 0.09908326372911844 MAPE: 299.4863526098461 Pearson Correlation: 0.4371100399980321 Spearman Correlation: 0.4688213069988404 Coefficient of Determination: 0.16192687643894887 RMSE: 0.682543257009263 NRMSE: 0.10672242311144757 MAPE: 785.4134891489002 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 70.56926892120713, tolerance: 0.016979184196949017 positive)
Pearson Correlation: 0.44814633268207077 Spearman Correlation: 0.4392262058963344 Coefficient of Determination: 0.19444164125748686 RMSE: 0.5042150171707901 NRMSE: 0.09753462882443324 MAPE: 267.31326986330106 Pearson Correlation: 0.436932308042635 Spearman Correlation: 0.47224052214471246 Coefficient of Determination: 0.1541849426458075 RMSE: 0.6856886013856142 NRMSE: 0.10721422897124762 MAPE: 505.4868401346051 Protein: BRCA2 x_train_column_count: 5 x_train columns: ['BRCA2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.05071644867686292 Spearman Correlation: 0.010980647728175162 Coefficient of Determination: 0.0025721581663927795 RMSE: 0.19155044210514194 NRMSE: 0.12340179874707163 MAPE: 118.18654412511495 Pearson Correlation: -0.14029766105186786 Spearman Correlation: -0.151759997007444 Coefficient of Determination: -0.012359699828151216 RMSE: 0.20938950923986618 NRMSE: 0.20342706205114708 MAPE: 147.26972355529193 Predictor: ElasticNet Pearson Correlation: 0.043966752467998124 Spearman Correlation: 0.010518550045125162 Coefficient of Determination: 0.0019330576645791853 RMSE: 0.19161180011757645 NRMSE: 0.12344132718155996 MAPE: 115.52610159057042 Pearson Correlation: -0.1556393681555241 Spearman Correlation: -0.1516801955136598 Coefficient of Determination: -0.01380952820246839 RMSE: 0.20953939185504275 NRMSE: 0.20357267670093826 MAPE: 152.8388138752767 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.5892224757367437, tolerance: 0.001979097117455079 positive)
Pearson Correlation: 0.29748409536573983 Spearman Correlation: 0.22762755121642217 Coefficient of Determination: 0.04366573697965859 RMSE: 0.18756304433379178 NRMSE: 0.12083301293850333 MAPE: 118.6768438975502 Pearson Correlation: -0.019302508339210173 Spearman Correlation: -0.026935047913685145 Coefficient of Determination: -0.00923731427144081 RMSE: 0.20906635350900685 NRMSE: 0.20311310830459905 MAPE: 117.40974708408407 Protein: CDKN2A x_train_column_count: 5 x_train columns: ['CDKN2A', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.62151181569314 Spearman Correlation: 0.5050613718513096 Coefficient of Determination: 0.3862769370461835 RMSE: 0.5279795887694266 NRMSE: 0.11935788148964091 MAPE: 268.8854508166422 Pearson Correlation: 0.6232082956236468 Spearman Correlation: 0.4879686779136897 Coefficient of Determination: 0.3522522919722727 RMSE: 0.5075850458121125 NRMSE: 0.15293312618623456 MAPE: 120.3946702718585 Predictor: ElasticNet Pearson Correlation: 0.6113836959017804 Spearman Correlation: 0.5051479501414623 Coefficient of Determination: 0.3737864294250697 RMSE: 0.5333252540972119 NRMSE: 0.12056635110143818 MAPE: 271.10780165925894 Pearson Correlation: 0.6048171104744425 Spearman Correlation: 0.48846244965647956 Coefficient of Determination: 0.3353702637434044 RMSE: 0.5141570087460853 NRMSE: 0.1549132295107217 MAPE: 126.02801676797976 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 76.69907236683144, tolerance: 0.024436786734185888 positive)
Pearson Correlation: 0.6315021316579708 Spearman Correlation: 0.5175085850702341 Coefficient of Determination: 0.39829848360987263 RMSE: 0.5227830094552866 NRMSE: 0.11818311505714627 MAPE: 286.8091880382585 Pearson Correlation: 0.6229795560883138 Spearman Correlation: 0.48235825210423916 Coefficient of Determination: 0.3606018325148975 RMSE: 0.5043030210309905 NRMSE: 0.1519442666559176 MAPE: 126.42484800288464 Protein: TP53 x_train_column_count: 5 x_train columns: ['TP53', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 0.3869104513493784 Spearman Correlation: 0.31824557321291597 Coefficient of Determination: 0.14969969736337974 RMSE: 0.415062663358495 NRMSE: 0.09975070015825403 MAPE: 870.8753962650171 Pearson Correlation: 0.4331377243608951 Spearman Correlation: 0.2472823850671455 Coefficient of Determination: 0.17950088809575837 RMSE: 0.39114170005706933 NRMSE: 0.1241246826786841 MAPE: 215.29402647014578 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 46.97308940929706, tolerance: 0.01090027058925727 positive)
Pearson Correlation: 0.3767777119224926 Spearman Correlation: 0.3159282264818715 Coefficient of Determination: 0.14194510807361826 RMSE: 0.41695101703060095 NRMSE: 0.10020452223758736 MAPE: 800.9985443358858 Pearson Correlation: 0.4281837453053648 Spearman Correlation: 0.25777129390640785 Coefficient of Determination: 0.17243836933290724 RMSE: 0.3928214864845688 NRMSE: 0.12465774513980984 MAPE: 222.3407703533475 Predictor: RandomForests Pearson Correlation: 0.4344928815774183 Spearman Correlation: 0.33659916441779625 Coefficient of Determination: 0.1871563068639337 RMSE: 0.40581773432610707 NRMSE: 0.09752889553619493 MAPE: 838.6185787542784 Pearson Correlation: 0.4382281627793782 Spearman Correlation: 0.25378423849339315 Coefficient of Determination: 0.18063167242045308 RMSE: 0.390872077950522 NRMSE: 0.12403912095408795 MAPE: 229.85658906022218 Protein: CTNNB1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['CTNNB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.1412442709728302 Spearman Correlation: 0.14086041754665 Coefficient of Determination: 0.019949944082645832 RMSE: 0.7042946175928066 NRMSE: 0.17010303777239077 MAPE: 578.9236412953519 Pearson Correlation: -0.013963391158830508 Spearman Correlation: 0.04679609471439794 Coefficient of Determination: -0.15701677482182008 RMSE: 0.8631576369354532 NRMSE: 0.18147288641313875 MAPE: 974.7087027913427 Predictor: ElasticNet Pearson Correlation: 0.13200570436272985 Spearman Correlation: 0.13657627544766576 Coefficient of Determination: 0.017424830232265265 RMSE: 0.705201346806331 NRMSE: 0.17032203333164211 MAPE: 569.4510315547574 Pearson Correlation: -0.04129050757223958 Spearman Correlation: 0.0357386002319231 Coefficient of Determination: -0.16022618134451827 RMSE: 0.8643539486115291 NRMSE: 0.18172440261784734 MAPE: 997.6700182625034 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 133.7852005788476, tolerance: 0.02722969373777278 positive)
Pearson Correlation: 0.2708212048810089 Spearman Correlation: 0.25332746502304954 Coefficient of Determination: 0.054911382401504394 RMSE: 0.6916183490541341 NRMSE: 0.16704143296641247 MAPE: 598.8024755186128 Pearson Correlation: 0.07267382808851819 Spearman Correlation: 0.13823949839064295 Coefficient of Determination: -0.133416084696651 RMSE: 0.8543089877843627 NRMSE: 0.17961251950726656 MAPE: 916.3275962998433 Protein: CCNE1 x_train_column_count: 5 x_train columns: ['CCNE1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 19.447408590883693, tolerance: 0.013709715616187399 positive)
NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.8529610894574474 Spearman Correlation: 0.7060094926331201 Coefficient of Determination: 0.727542620128436 RMSE: 0.26349499672777527 NRMSE: 0.06358930345531175 MAPE: 51.010937229534036 Pearson Correlation: 0.8682670798193397 Spearman Correlation: 0.7233681217970299 Coefficient of Determination: 0.7401401552011868 RMSE: 0.2304605549164574 NRMSE: 0.09404250180219433 MAPE: 64.03681999023276 Predictor: ElasticNet Pearson Correlation: 0.8488139755961145 Spearman Correlation: 0.7105645817584747 Coefficient of Determination: 0.7204762177624416 RMSE: 0.2668901018010379 NRMSE: 0.06440864488284333 MAPE: 52.86332031966043 Pearson Correlation: 0.8686020478582129 Spearman Correlation: 0.7249192633324606 Coefficient of Determination: 0.7392738190324548 RMSE: 0.23084439679983756 NRMSE: 0.09419913359986844 MAPE: 66.5517235906768 Predictor: RandomForests Pearson Correlation: 0.8556190996092287 Spearman Correlation: 0.7158559487574293 Coefficient of Determination: 0.7285374272520773 RMSE: 0.2630135151662088 NRMSE: 0.06347310740792259 MAPE: 55.538420267080554 Pearson Correlation: 0.8456838474620257 Spearman Correlation: 0.7088274541368929 Coefficient of Determination: 0.7022821756292825 RMSE: 0.24667744086523613 NRMSE: 0.10066001830785773 MAPE: 69.87901290517232 Protein: CCND1 x_train_column_count: 5 x_train columns: ['CCND1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 0.41583221962130884 Spearman Correlation: 0.3728160125831736 Coefficient of Determination: 0.17291643487518427 RMSE: 0.21854526331137802 NRMSE: 0.13962590773908973 MAPE: 508.5732452869553 Pearson Correlation: 0.5462933467117987 Spearman Correlation: 0.49870696642102774 Coefficient of Determination: 0.2747804350975108 RMSE: 0.19501757374464038 NRMSE: 0.12299291986922326 MAPE: 472.2105940711444 Predictor: ElasticNet Pearson Correlation: 0.4158041492833737 Spearman Correlation: 0.3728160125831736 Coefficient of Determination: 0.1728924673608947 RMSE: 0.21854842982864164 NRMSE: 0.13962793078841418 MAPE: 508.5215125910606 Pearson Correlation: 0.5471627484839892 Spearman Correlation: 0.49870696642102774 Coefficient of Determination: 0.2750178026352521 RMSE: 0.194985656080008 NRMSE: 0.12297279016145814 MAPE: 473.30982883207093 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 12.857742604828381, tolerance: 0.003106817057166876 positive)
Pearson Correlation: 0.4534102784452129 Spearman Correlation: 0.39949586103691814 Coefficient of Determination: 0.201714526488304 RMSE: 0.2147068081987384 NRMSE: 0.13717356550436258 MAPE: 504.68191690638884 Pearson Correlation: 0.5245326485699925 Spearman Correlation: 0.5018856606099847 Coefficient of Determination: 0.256893306003401 RMSE: 0.19740792327410847 NRMSE: 0.12450045615168295 MAPE: 425.381048022874 Protein: ERBB2
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['ERBB2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 0.8373685300066155 Spearman Correlation: 0.6238582415521245 Coefficient of Determination: 0.7011860550454398 RMSE: 0.5361569560770851 NRMSE: 0.09134316167386496 MAPE: 583.2189934748867 Pearson Correlation: 0.8223609825716248 Spearman Correlation: 0.67230847305938 Coefficient of Determination: 0.6286429094074333 RMSE: 0.631734700469658 NRMSE: 0.11375638356136024 MAPE: 276.02431724553065 Predictor: ElasticNet Pearson Correlation: 0.8373683450641074 Spearman Correlation: 0.6238582415521245 Coefficient of Determination: 0.7011857354023006 RMSE: 0.5361572428422272 NRMSE: 0.09134321052902657 MAPE: 587.4422746574094 Pearson Correlation: 0.8228550008912285 Spearman Correlation: 0.67230847305938 Coefficient of Determination: 0.6294806573825034 RMSE: 0.6310217299987586 NRMSE: 0.11362799906341316 MAPE: 277.14951376181597 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 77.41023844277322, tolerance: 0.051756548208396 positive)
Pearson Correlation: 0.8379118261616796 Spearman Correlation: 0.6242468308358713 Coefficient of Determination: 0.7012142796478228 RMSE: 0.5361316340087601 NRMSE: 0.09133884764276881 MAPE: 438.3459695332958 Pearson Correlation: 0.7900096819255299 Spearman Correlation: 0.6588300179349611 Coefficient of Determination: 0.5694557973034011 RMSE: 0.6802174131909045 NRMSE: 0.12248665919813168 MAPE: 216.95644678206537 Protein: ERBB3 x_train_column_count: 5 x_train columns: ['ERBB3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.47245103399287114 Spearman Correlation: 0.47552075718519643 Coefficient of Determination: 0.2232099795209329 RMSE: 0.42103816412044087 NRMSE: 0.1151261389537981 MAPE: 249.74506946596935 Pearson Correlation: 0.39289773822701113 Spearman Correlation: 0.3188393870247759 Coefficient of Determination: 0.12230819887985145 RMSE: 0.3602953356392931 NRMSE: 0.17733949688644962 MAPE: 245.1873285276875 Predictor: ElasticNet Pearson Correlation: 0.4719236370017398 Spearman Correlation: 0.47559620013365334 Coefficient of Determination: 0.22271008951132842 RMSE: 0.42117361830735484 NRMSE: 0.1151631767305923 MAPE: 247.85469608762418 Pearson Correlation: 0.39605595670559585 Spearman Correlation: 0.3203655905933989 Coefficient of Determination: 0.12546678380800647 RMSE: 0.35964644663033235 NRMSE: 0.17702010987529093 MAPE: 243.1622058347012 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 47.789876491084996, tolerance: 0.012277828558956158 positive)
Pearson Correlation: 0.5017575914848379 Spearman Correlation: 0.4921605147487151 Coefficient of Determination: 0.2503000193256526 RMSE: 0.41363129949439237 NRMSE: 0.11310085051484675 MAPE: 238.28030543478857 Pearson Correlation: 0.4041323955475392 Spearman Correlation: 0.32032765592468015 Coefficient of Determination: 0.13857368373267354 RMSE: 0.3569412060034264 NRMSE: 0.1756885744256825 MAPE: 237.4408613379951 Fold: 5 Protein: RB1 x_train_column_count: 5 x_train columns: ['RB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.23270652465302064 Spearman Correlation: 0.2667269773515898 Coefficient of Determination: 0.05415232661608693 RMSE: 0.22748366875742157 NRMSE: 0.11238034648109234 MAPE: 212.3500957080418 Pearson Correlation: 0.19958439471113903 Spearman Correlation: 0.28047481888801606 Coefficient of Determination: -0.05135531466848997 RMSE: 0.24646436911849257 NRMSE: 0.12426858455443024 MAPE: 478.68477091583134 Predictor: ElasticNet Pearson Correlation: 0.23189093727555174 Spearman Correlation: 0.26542695445284614 Coefficient of Determination: 0.053773342621778686 RMSE: 0.22752923848160556 NRMSE: 0.11240285860875766 MAPE: 215.9816743652208 Pearson Correlation: 0.20008879561913895 Spearman Correlation: 0.28295365278868817 Coefficient of Determination: -0.05215367986819541 RMSE: 0.24655792989275274 NRMSE: 0.12431575837119212 MAPE: 500.65249483723295 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 12.77836853162498, tolerance: 0.002943482941498817 positive)
Pearson Correlation: 0.3145025462633167 Spearman Correlation: 0.35956151450924767 Coefficient of Determination: 0.09132386711635232 RMSE: 0.22296884509436773 NRMSE: 0.11014995583227584 MAPE: 211.2056067728131 Pearson Correlation: 0.21123097353652284 Spearman Correlation: 0.23779555867019272 Coefficient of Determination: -0.04878630534383244 RMSE: 0.24616306445127475 NRMSE: 0.12411666521351812 MAPE: 529.0921149732138 Protein: CDH1 x_train_column_count: 5 x_train columns: ['CDH1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.7389246713149259 Spearman Correlation: 0.5872703175681603 Coefficient of Determination: 0.5460096698778714 RMSE: 0.7587343850169551 NRMSE: 0.1208137296609909 MAPE: 193.3572717363208 Pearson Correlation: 0.6099933421978121 Spearman Correlation: 0.5418895497450094 Coefficient of Determination: 0.3559651740860219 RMSE: 0.932323279131504 NRMSE: 0.18334413858754087 MAPE: 1036.377499990703 Predictor: ElasticNet Pearson Correlation: 0.7306685951587257 Spearman Correlation: 0.5889053256204806 Coefficient of Determination: 0.5338595589043428 RMSE: 0.7688203254928293 NRMSE: 0.12241971999185204 MAPE: 212.0681277364866 Pearson Correlation: 0.6053822871804243 Spearman Correlation: 0.5418695993715633 Coefficient of Determination: 0.35281599115512785 RMSE: 0.9345999232087346 NRMSE: 0.1837918473990157 MAPE: 1129.8841238961008 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 159.49282989911396, tolerance: 0.0682205483025332 positive)
Pearson Correlation: 0.7477132730675663 Spearman Correlation: 0.5990881223566048 Coefficient of Determination: 0.5587490298670774 RMSE: 0.7480132684931943 NRMSE: 0.11910659986834722 MAPE: 166.2197926101653 Pearson Correlation: 0.616013622220581 Spearman Correlation: 0.5412740364706119 Coefficient of Determination: 0.3622554955236724 RMSE: 0.9277590822668783 NRMSE: 0.1824465757343766 MAPE: 665.3142844496236 Protein: CDH2 x_train_column_count: 5 x_train columns: ['CDH2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 33.89075534803248, tolerance: 0.0069390679727214565 positive)
-0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.15558875113729545 Spearman Correlation: 0.10688608362037365 Coefficient of Determination: 0.024207859480463 RMSE: 0.35476281385599956 NRMSE: 0.17423643920043197 MAPE: 408.1935946680244 Pearson Correlation: 0.1190167453445145 Spearman Correlation: -0.0019725956341062403 Coefficient of Determination: -0.018494305520504684 RMSE: 0.42093081373028707 NRMSE: 0.15740733082672514 MAPE: 1073.8975599665655 Predictor: ElasticNet Pearson Correlation: 0.15149186355019773 Spearman Correlation: 0.0788810308696499 Coefficient of Determination: 0.022949746256153536 RMSE: 0.3549914424722094 NRMSE: 0.17434872671882978 MAPE: 355.8401998090676 Pearson Correlation: 0.1261390567310113 Spearman Correlation: -0.1015076266632875 Coefficient of Determination: -0.1590599898073617 RMSE: 0.44903932208198566 NRMSE: 0.16791852442158656 MAPE: 491.3243009296805 Predictor: RandomForests Pearson Correlation: 0.2225471452913145 Spearman Correlation: 0.23310971157694335 Coefficient of Determination: 0.04505088005103708 RMSE: 0.3509534769848271 NRMSE: 0.17236554048662986 MAPE: 516.4084618816934 Pearson Correlation: 0.02613563430060784 Spearman Correlation: 0.01272366311076386 Coefficient of Determination: -0.02965335260008506 RMSE: 0.42323047837424443 NRMSE: 0.15826729180272028 MAPE: 421.1178441241013 Protein: CDH3 x_train_column_count: 5 x_train columns: ['CDH3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.3356745099748152 Spearman Correlation: 0.3411823469602052 Coefficient of Determination: 0.1126773766468322 RMSE: 0.19194478219547997 NRMSE: 0.13466407237152717 MAPE: 468.99761051254313 Pearson Correlation: 0.32805802009213125 Spearman Correlation: 0.29341762366114293 Coefficient of Determination: 0.10477311468755002 RMSE: 0.211365670724267 NRMSE: 0.19069611844591436 MAPE: 141.26139491413974 Predictor: ElasticNet Pearson Correlation: 0.33562068965673136 Spearman Correlation: 0.3413325007638213 Coefficient of Determination: 0.11264124395019437 RMSE: 0.19194869025090433 NRMSE: 0.13466681417389595 MAPE: 461.90164954851633 Pearson Correlation: 0.3285469621073701 Spearman Correlation: 0.2925148692627091 Coefficient of Determination: 0.10503286043953075 RMSE: 0.21133500513607756 NRMSE: 0.19066845166058657 MAPE: 141.2350445834854 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 9.840945315161168, tolerance: 0.0022338465809413456 positive)
Pearson Correlation: 0.36966331835635 Spearman Correlation: 0.37024487646320453 Coefficient of Determination: 0.13530080837221514 RMSE: 0.1894820436000439 NRMSE: 0.13293627125781832 MAPE: 428.8744965194493 Pearson Correlation: 0.33392383751857757 Spearman Correlation: 0.2896321859679133 Coefficient of Determination: 0.1080813307623334 RMSE: 0.21097476953916952 NRMSE: 0.190343443678822 MAPE: 147.6576392773054 Protein: PTEN x_train_column_count: 5 x_train columns: ['PTEN', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 73.0665136922114, tolerance: 0.017420030134596684 positive)
Pearson Correlation: 0.4131884794155886 Spearman Correlation: 0.42344138563175693 Coefficient of Determination: 0.17072471952176638 RMSE: 0.5181824178198983 NRMSE: 0.08102297206158991 MAPE: 498.9032849167404 Pearson Correlation: 0.43754269141468727 Spearman Correlation: 0.4216536365790097 Coefficient of Determination: 0.18274562433019803 RMSE: 0.6524362199770304 NRMSE: 0.1262063254365967 MAPE: 334.26074770029226 Predictor: ElasticNet Pearson Correlation: 0.4023279704656468 Spearman Correlation: 0.4204847775371454 Coefficient of Determination: 0.1618627932563942 RMSE: 0.520943799607451 NRMSE: 0.08145474155381924 MAPE: 447.5316570213252 Pearson Correlation: 0.4327434928061863 Spearman Correlation: 0.428546490604621 Coefficient of Determination: 0.18184305461568362 RMSE: 0.6527963934397566 NRMSE: 0.12627599687398572 MAPE: 312.0792018004828 Predictor: RandomForests Pearson Correlation: 0.4424713683162719 Spearman Correlation: 0.4429013674143712 Coefficient of Determination: 0.19271961505571344 RMSE: 0.5112643528819989 NRMSE: 0.07994126383894909 MAPE: 489.48198787226653 Pearson Correlation: 0.4124809121288077 Spearman Correlation: 0.4376523846678659 Coefficient of Determination: 0.1632524121174317 RMSE: 0.6601713457348014 NRMSE: 0.12770259705485945 MAPE: 405.61580355046533 Protein: BRCA2 x_train_column_count: 5 x_train columns: ['BRCA2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.06306995276346646 Spearman Correlation: 0.06884273211980942 Coefficient of Determination: 0.003977818941585887 RMSE: 0.20006909044583238 NRMSE: 0.12888973454394098 MAPE: 119.88238172428535
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.6338059559221705, tolerance: 0.0021620874757223526 positive)
Pearson Correlation: -0.0714784409227315 Spearman Correlation: -0.04166884873876233 Coefficient of Determination: -0.11216194354980291 RMSE: 0.17515442201548667 NRMSE: 0.22906482968088232 MAPE: 107.13089883685242 Predictor: ElasticNet Pearson Correlation: 0.04859512221269275 Spearman Correlation: 0.022102742200959976 Coefficient of Determination: 0.0023614126292870186 RMSE: 0.20023136687284723 NRMSE: 0.12899427725743098 MAPE: 114.68087217196805 Pearson Correlation: -0.0696073693140188 Spearman Correlation: 0.041633935585231735 Coefficient of Determination: -0.10655599662599391 RMSE: 0.17471242394451875 NRMSE: 0.22848678996209865 MAPE: 105.34985452535474 Predictor: RandomForests Pearson Correlation: 0.2808683030346905 Spearman Correlation: 0.22741927753543684 Coefficient of Determination: 0.04207463164836134 RMSE: 0.1962055690044515 NRMSE: 0.126400753103206 MAPE: 124.0222781618915 Pearson Correlation: -0.08084835885705399 Spearman Correlation: -0.009163349322339706 Coefficient of Determination: -0.11690642357710335 RMSE: 0.1755276285743108 NRMSE: 0.22955290469405715 MAPE: 121.66442003308069 Protein: CDKN2A x_train_column_count: 5 x_train columns: ['CDKN2A', '2', '1/2', '3', '1/3'] Predictor: Zero
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 69.6835231024751, tolerance: 0.024854257731250624 positive)
Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 0.672080714019558 Spearman Correlation: 0.543292862446596 Coefficient of Determination: 0.4516924861570385 RMSE: 0.5032935441105788 NRMSE: 0.12815908535829973 MAPE: 248.2785818449377 Pearson Correlation: 0.3862307085509132 Spearman Correlation: 0.31098891507375404 Coefficient of Determination: -0.0062757436303442216 RMSE: 0.6078478969388134 NRMSE: 0.1529523406403496 MAPE: 361.4897192737468 Predictor: ElasticNet Pearson Correlation: 0.6645900806504131 Spearman Correlation: 0.5433464199993303 Coefficient of Determination: 0.4416733932246907 RMSE: 0.5078710097155037 NRMSE: 0.12932469499516278 MAPE: 245.35011058290164 Pearson Correlation: 0.37655223781767105 Spearman Correlation: 0.3106048703849175 Coefficient of Determination: -0.0364636284410762 RMSE: 0.6168981240916295 NRMSE: 0.15522964296108036 MAPE: 366.8357178637537 Predictor: RandomForests Pearson Correlation: 0.6804985222571751 Spearman Correlation: 0.5578792484186119 Coefficient of Determination: 0.4625852388380224 RMSE: 0.4982692159571973 NRMSE: 0.12687968627159923 MAPE: 263.8935646704191 Pearson Correlation: 0.3799901370327922 Spearman Correlation: 0.3102182095928762 Coefficient of Determination: -0.06055211708875974 RMSE: 0.6240256251250411 NRMSE: 0.15702313105484036 MAPE: 482.3157360920266 Protein: TP53 x_train_column_count: 5 x_train columns: ['TP53', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 41.497711693607755, tolerance: 0.009662504276089433 positive)
Pearson Correlation: 0.38648475397533816 Spearman Correlation: 0.27447594608935266 Coefficient of Determination: 0.14937046505537765 RMSE: 0.3908624416649445 NRMSE: 0.09940803216382525 MAPE: 859.7576624749943 Pearson Correlation: 0.4402408751240679 Spearman Correlation: 0.43428222297036123 Coefficient of Determination: 0.16590818790723116 RMSE: 0.48234829941135626 NRMSE: 0.1291946697231435 MAPE: 173.09103872705322 Predictor: ElasticNet Pearson Correlation: 0.3796894457463908 Spearman Correlation: 0.28529734594584155 Coefficient of Determination: 0.14415548212454232 RMSE: 0.3920587476282205 NRMSE: 0.09971228862082468 MAPE: 808.6087632164897 Pearson Correlation: 0.4151204177203985 Spearman Correlation: 0.40125936732378215 Coefficient of Determination: 0.15160570822433495 RMSE: 0.48646622357668007 NRMSE: 0.13029763588500873 MAPE: 171.54803269374034 Predictor: RandomForests Pearson Correlation: 0.4314398671341708 Spearman Correlation: 0.34636829091320603 Coefficient of Determination: 0.18523114654365025 RMSE: 0.3825347745338055 NRMSE: 0.09729005685134555 MAPE: 844.9597621257487 Pearson Correlation: 0.43923064667351636 Spearman Correlation: 0.307609706668647 Coefficient of Determination: 0.17124734532602126 RMSE: 0.48080202597385313 NRMSE: 0.12878050782746836 MAPE: 184.65594885123437 Protein: CTNNB1 x_train_column_count: 5 x_train columns: ['CTNNB1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.07475758774584197 Spearman Correlation: 0.08028474125005854 Coefficient of Determination: 0.005588696925577175 RMSE: 0.7538653607368557 NRMSE: 0.1482819356288072 MAPE: 694.1627662568337 Pearson Correlation: 0.31176802427198924 Spearman Correlation: 0.27228020299504985 Coefficient of Determination: 0.04508670397804693 RMSE: 0.6622048661651012 NRMSE: 0.21208268863437982 MAPE: 272.73143299931155 Predictor: ElasticNet Pearson Correlation: 0.06823098562886161 Spearman Correlation: 0.08227785293923591
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 153.00318067085078, tolerance: 0.030747074518831245 positive)
Coefficient of Determination: 0.004655464118917485 RMSE: 0.7542190206859309 NRMSE: 0.14835149895474645 MAPE: 689.2073446842593 Pearson Correlation: 0.2624572306476125 Spearman Correlation: 0.25015523884337715 Coefficient of Determination: 0.037464968272584276 RMSE: 0.6648423408983309 NRMSE: 0.21292738604028674 MAPE: 273.6540198056672 Predictor: RandomForests Pearson Correlation: 0.2709132651209278 Spearman Correlation: 0.26370850559812414 Coefficient of Determination: 0.053288494500083106 RMSE: 0.7355625165488577 NRMSE: 0.14468184825902003 MAPE: 720.5866044879414 Pearson Correlation: 0.22578045319806445 Spearman Correlation: 0.2610385476917296 Coefficient of Determination: 0.04094858945371527 RMSE: 0.6636381466799675 NRMSE: 0.21254172178362327 MAPE: 272.38990168301905 Protein: CCNE1
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 14.713666400483493, tolerance: 0.010836139816194496 positive)
x_train_column_count: 5 x_train columns: ['CCNE1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.8540244401970254 Spearman Correlation: 0.7126498474881204 Coefficient of Determination: 0.7293577444538428 RMSE: 0.23347692471209774 NRMSE: 0.08316186098382822 MAPE: 51.418110392160386 Pearson Correlation: 0.6497997477653084 Spearman Correlation: 0.7178967318794499 Coefficient of Determination: -1.277461460022288 RMSE: 0.978058716207926 NRMSE: 0.23603511745732703 MAPE: 77.51610280918695 Predictor: ElasticNet Pearson Correlation: 0.8537738725448291 Spearman Correlation: 0.712662485529828 Coefficient of Determination: 0.7289286487367779 RMSE: 0.233661936971108 NRMSE: 0.08322776027466001 MAPE: 52.36961766258009 Pearson Correlation: 0.6014900180742293 Spearman Correlation: 0.717752091671966 Coefficient of Determination: -4.063206685679627 RMSE: 1.4583180043119597 NRMSE: 0.3519361933325192 MAPE: 81.12657448103911 Predictor: RandomForests Pearson Correlation: 0.8556441900853572 Spearman Correlation: 0.7114927920105991 Coefficient of Determination: 0.7307222498598404 RMSE: 0.23288761708519015 NRMSE: 0.08295195621912382 MAPE: 56.512948131727114 Pearson Correlation: 0.8005340807679645 Spearman Correlation: 0.7307358786224182 Coefficient of Determination: 0.6136504949478718 RMSE: 0.4028372194679773 NRMSE: 0.09721679162776681 MAPE: 78.43246041847577 Protein: CCND1 x_train_column_count: 5 x_train columns: ['CCND1', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.4626434839358266 Spearman Correlation: 0.42726285187649277 Coefficient of Determination: 0.21403899322827935 RMSE: 0.20179414905906626 NRMSE: 0.1271000132640496 MAPE: 552.8330010382914 Pearson Correlation: 0.37459600749039296 Spearman Correlation: 0.2762503273108144 Coefficient of Determination: 0.13855859513620006 RMSE: 0.2561281696229925 NRMSE: 0.16363716897496358 MAPE: 246.4335424505451 Predictor: ElasticNet Pearson Correlation: 0.4625819755486359 Spearman Correlation: 0.42726285187649277 Coefficient of Determination: 0.21398149147216694 RMSE: 0.20180153066300108 NRMSE: 0.12710466256613492 MAPE: 553.0764667446463 Pearson Correlation: 0.37482843688266904 Spearman Correlation: 0.2762503273108144 Coefficient of Determination: 0.13867885276893444 RMSE: 0.2561102911914312 NRMSE: 0.16362574666272547 MAPE: 246.1580171935888 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 10.96402475238492, tolerance: 0.0027873943484564415 positive)
Pearson Correlation: 0.4910407652661457 Spearman Correlation: 0.4512173853537595 Coefficient of Determination: 0.23794654241381163 RMSE: 0.19870133669976142 NRMSE: 0.12515200588264727 MAPE: 544.398322519066 Pearson Correlation: 0.3914267081554952 Spearman Correlation: 0.29422489289803727 Coefficient of Determination: 0.1502358369927379 RMSE: 0.25438627776972494 NRMSE: 0.16252429547905403 MAPE: 251.6982563544654 Protein: ERBB2
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign
x_train_column_count: 5 x_train columns: ['ERBB2', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.8379047268750066 Spearman Correlation: 0.6442627066647334 Coefficient of Determination: 0.7020843313194796 RMSE: 0.5610558949263258 NRMSE: 0.09558510569983573 MAPE: 612.5144842560403 Pearson Correlation: 0.7946679971130686 Spearman Correlation: 0.5872666741480568 Coefficient of Determination: 0.6295716692267542 RMSE: 0.5281190639936116 NRMSE: 0.11685342714760741 MAPE: 397.5716816920061 Predictor: ElasticNet Pearson Correlation: 0.8379121401100722 Spearman Correlation: 0.6442627066647334 Coefficient of Determination: 0.7020966483752422 RMSE: 0.5610442966303995 NRMSE: 0.09558312973923701 MAPE: 608.1903330853422 Pearson Correlation: 0.7950904315920551 Spearman Correlation: 0.5872666741480568 Coefficient of Determination: 0.6301546536636439 RMSE: 0.5277033203756247 NRMSE: 0.11676143829530362 MAPE: 393.285287448166 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 84.77010546827933, tolerance: 0.05684616744754108 positive)
Pearson Correlation: 0.8379861452033743 Spearman Correlation: 0.6476501506375566 Coefficient of Determination: 0.7006763907536449 RMSE: 0.5623800989471744 NRMSE: 0.09581070564887038 MAPE: 556.9767645322418 Pearson Correlation: 0.7749886498442887 Spearman Correlation: 0.580392527783357 Coefficient of Determination: 0.5947357683413012 RMSE: 0.5523939139330684 NRMSE: 0.12222456332184277 MAPE: 295.794727890533 Protein: ERBB3 x_train_column_count: 5 x_train columns: ['ERBB3', '2', '1/2', '3', '1/3'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE:
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:14: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:15: RuntimeWarning: invalid value encountered in sign from ipykernel import kernelapp as app C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:16: RuntimeWarning: invalid value encountered in sign app.launch_new_instance() C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:17: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:19: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\ipykernel_launcher.py:20: RuntimeWarning: invalid value encountered in sign C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 48.13419887695448, tolerance: 0.011829371061673479 positive)
0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.43485985608794964 Spearman Correlation: 0.4114220405982996 Coefficient of Determination: 0.18910309443683238 RMSE: 0.4222527738142841 NRMSE: 0.11395390431288989 MAPE: 256.40717101811504 Pearson Correlation: 0.568650630753043 Spearman Correlation: 0.5619845633985462 Coefficient of Determination: 0.2999317344480674 RMSE: 0.3488786815766451 NRMSE: 0.1687981080183493 MAPE: 215.81160822328528 Predictor: ElasticNet Pearson Correlation: 0.433727248409839 Spearman Correlation: 0.41142820549776254 Coefficient of Determination: 0.18811738825436586 RMSE: 0.42250933587405815 NRMSE: 0.1140231430490756 MAPE: 253.22092269400994 Pearson Correlation: 0.5717292049341615 Spearman Correlation: 0.5619845633985462 Coefficient of Determination: 0.29980396212270133 RMSE: 0.3489105177623502 NRMSE: 0.1688135113324448 MAPE: 213.3888217916431 Predictor: RandomForests Pearson Correlation: 0.46247361973981643 Spearman Correlation: 0.42563267771628494 Coefficient of Determination: 0.21289293377250285 RMSE: 0.41601270604680346 NRMSE: 0.1122698891225144 MAPE: 251.7081601814871 Pearson Correlation: 0.5455346016104494 Spearman Correlation: 0.559355485434222 Coefficient of Determination: 0.26915297963017726 RMSE: 0.35646547824651587 NRMSE: 0.17246883079798914 MAPE: 218.3854165683859
self-mRNA, CNA and Mutations
ZScore
scenario = Scenario.selfmRNA_CNA_Mutations
normalizeTechnique = NormalizeTechnique.ZScore
X, Y, Z = get_mRNA_DNA_data(normalizeTechnique)
X.head()
| mRNA_RB1 | DNA_RB1 | mRNA_CDH1 | DNA_CDH1 | mRNA_PTEN | DNA_PTEN | mRNA_BRCA2 | DNA_BRCA2 | mRNA_CDKN2A | DNA_CDKN2A | ... | mRNA_CCND1 | DNA_CCND1 | mRNA_CDH2 | DNA_CDH2 | mRNA_CDH3 | DNA_CDH3 | mRNA_ERBB2 | DNA_ERBB2 | mRNA_ERBB3 | DNA_ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | -0.169062 | 0.645767 | 0.503546 | -0.281316 | 0.253110 | 1.470038 | -0.656137 | 0.401993 | -0.310030 | -0.589121 | ... | -0.481121 | -0.492888 | -0.185578 | 0.028002 | -0.155083 | -0.280362 | -0.255401 | -0.350705 | 1.256673 | 1.276933 |
| TCGA-A1-A0SH-01 | -0.007997 | 0.511411 | -0.218036 | -0.508680 | 0.822029 | 0.372176 | -0.675902 | 0.271349 | -0.051543 | 0.222722 | ... | -0.399177 | -0.467793 | 0.156932 | 0.042018 | -0.247480 | -0.512646 | -0.003031 | 0.067456 | -0.155600 | -0.116612 |
| TCGA-A1-A0SJ-01 | 1.121529 | 0.058287 | 5.444905 | 1.827685 | -0.125278 | -1.330497 | 0.110958 | 1.252463 | -0.298170 | -0.937053 | ... | 0.665814 | 0.308381 | -0.080529 | 1.009162 | -0.276032 | 1.874270 | -0.221704 | -0.068468 | -0.061644 | -1.372566 |
| TCGA-A1-A0SK-01 | -1.978110 | -2.821157 | -0.985888 | -1.290082 | -1.230318 | 0.332732 | 3.771735 | 2.943156 | 0.780958 | 0.577613 | ... | -0.671374 | -0.382647 | 1.216341 | 0.406449 | -0.341170 | -1.310955 | -0.448784 | -0.572339 | -1.244373 | 0.130346 |
| TCGA-A1-A0SQ-01 | -0.079638 | -1.277374 | 2.149911 | 0.607234 | 0.461093 | 0.306436 | -0.724060 | -1.468016 | -0.299158 | 0.229680 | ... | 3.892254 | 2.791061 | 4.990736 | 0.037346 | -0.548288 | 0.627413 | -0.315679 | -0.386201 | 1.675601 | -0.137779 |
5 rows × 26 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 3 x_train columns: ['mRNA_RB1', 'DNA_RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.20326920373261573 Spearman Correlation: 0.27022625031888176 Coefficient of Determination: 0.041318369186091664 RMSE: 0.2194233317681655 NRMSE: 0.08309915991977485 MAPE: 175.04108593233508 Pearson Correlation: 0.28574808792465567 Spearman Correlation: 0.3606135986733002 Coefficient of Determination: 0.02542479532111619 RMSE: 0.2768778973741517 NRMSE: 0.13678183673503094 MAPE: 108.76525992317983 Predictor: ElasticNet Pearson Correlation: 0.20171347842025109 Spearman Correlation: 0.27028901927611426 Coefficient of Determination: 0.0372795191565346 RMSE: 0.219885052568371 NRMSE: 0.08327402104463964 MAPE: 167.35261909760123 Pearson Correlation: 0.2863844317824365 Spearman Correlation: 0.3689152277826554 Coefficient of Determination: 0.012311110576724404 RMSE: 0.2787344789933235 NRMSE: 0.1376990159188054 MAPE: 114.69753157475562 Predictor: RandomForests Pearson Correlation: 0.3348986575549158 Spearman Correlation: 0.38614644335891535 Coefficient of Determination: 0.09768274559867507 RMSE: 0.21287528052354343 NRMSE: 0.08061930714771574 MAPE: 146.763266226592 Pearson Correlation: 0.28899264921113227 Spearman Correlation: 0.2894305858298582 Coefficient of Determination: 0.03107094550160938 RMSE: 0.27607469358801306 NRMSE: 0.13638504201005472 MAPE: 107.46049111238705 Protein: CDH1 x_train_column_count: 3 x_train columns: ['mRNA_CDH1', 'DNA_CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 0.6326631043068565 Spearman Correlation: 0.5680069879672683 Coefficient of Determination: 0.40026260355118826 RMSE: 0.8738879812349621 NRMSE: 0.14688921070293348 MAPE: 487.78125181587467 Pearson Correlation: 0.6607881864892997 Spearman Correlation: 0.6431567651936396 Coefficient of Determination: 0.4336632177510208 RMSE: 0.8731918333158549 NRMSE: 0.1414259067273258 MAPE: 291.64974724245127 Predictor: ElasticNet Pearson Correlation: 0.6116805259549635 Spearman Correlation: 0.5713362224618636 Coefficient of Determination: 0.3593416973158804 RMSE: 0.9032093627073435 NRMSE: 0.15181775380420276 MAPE: 558.4201005970006 Pearson Correlation: 0.6293300258234633 Spearman Correlation: 0.6505706760316068 Coefficient of Determination: 0.3920437387059602 RMSE: 0.9047080373194338 NRMSE: 0.1465304067441019 MAPE: 319.15029427460604 Predictor: RandomForests Pearson Correlation: 0.7213486190668864 Spearman Correlation: 0.5942610225745192 Coefficient of Determination: 0.5194842191756326 RMSE: 0.7822202036837387 NRMSE: 0.13148104880973202 MAPE: 300.1983767557193 Pearson Correlation: 0.7465998349399987 Spearman Correlation: 0.6562231643594731 Coefficient of Determination: 0.5540542904091961 RMSE: 0.7748422182042797 NRMSE: 0.12549677985881244 MAPE: 150.95901062986337 Protein: CDH2 x_train_column_count: 3 x_train columns: ['mRNA_CDH2', 'DNA_CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.16137180773813012 Spearman Correlation: 0.027332008895292137 Coefficient of Determination: 0.026040860332672167 RMSE: 0.3663294699731344 NRMSE: 0.13533323357720706 MAPE: 299.139913177061 Pearson Correlation: 0.04697464071038728 Spearman Correlation: 0.09022534386889086 Coefficient of Determination: -0.0002842825448872155 RMSE: 0.3751683058926436 NRMSE: 0.193615268562029 MAPE: 106.76505249316418 Predictor: ElasticNet Pearson Correlation: 0.1604865941701109 Spearman Correlation: 0.024526119996395937 Coefficient of Determination: 0.02422176949045185 RMSE: 0.36667141230415234 NRMSE: 0.13545955746088742 MAPE: 345.67752906630386 Pearson Correlation: 0.06364078887532351 Spearman Correlation: 0.11242805579943421 Coefficient of Determination: 0.0034447244984494585 RMSE: 0.37446834910534665 NRMSE: 0.19325403783111247 MAPE: 105.55773627594616 Predictor: RandomForests Pearson Correlation: 0.26977180725365674 Spearman Correlation: 0.2054847272152512 Coefficient of Determination: 0.06630380696998062 RMSE: 0.3586776229688624 NRMSE: 0.1325064088666476 MAPE: 443.56367769079014 Pearson Correlation: -0.05647083983751969 Spearman Correlation: -0.05307111869844098 Coefficient of Determination: -0.08421939044811344 RMSE: 0.39059169499782953 NRMSE: 0.2015749058150537 MAPE: 103.7231118172311 Protein: CDH3 x_train_column_count: 3 x_train columns: ['mRNA_CDH3', 'DNA_CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.2486019609306757 Spearman Correlation: 0.3066728575457907 Coefficient of Determination: 0.06180293497857692 RMSE: 0.20224465673949088 NRMSE: 0.14189022895232845 MAPE: 291.8153117606786 Pearson Correlation: 0.42033229281364304 Spearman Correlation: 0.4547702663154814 Coefficient of Determination: 0.16065258119904446 RMSE: 0.1874272020959975 NRMSE: 0.14345638540539107 MAPE: 198.92792755838983 Predictor: ElasticNet Pearson Correlation: 0.24821600086503437 Spearman Correlation: 0.3061115403229242 Coefficient of Determination: 0.05692412031486016 RMSE: 0.20276983144950572 NRMSE: 0.14225867952622898 MAPE: 234.80439124339486 Pearson Correlation: 0.4229275133140768 Spearman Correlation: 0.4640717978733782 Coefficient of Determination: 0.1374548654963682 RMSE: 0.18999958718841511 NRMSE: 0.14542528353278208 MAPE: 167.23048620676332 Predictor: RandomForests Pearson Correlation: 0.3548257336896427 Spearman Correlation: 0.3370143915831307 Coefficient of Determination: 0.12258981740292196 RMSE: 0.1955831140241697 NRMSE: 0.13721664283000062 MAPE: 380.73704270156037 Pearson Correlation: 0.43990580328478923 Spearman Correlation: 0.42447989187064034 Coefficient of Determination: 0.17332189507293716 RMSE: 0.1860072877259621 NRMSE: 0.1423695859396117 MAPE: 336.93805668472237 Protein: PTEN x_train_column_count: 3 x_train columns: ['mRNA_PTEN', 'DNA_PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 0.428851442797307 Spearman Correlation: 0.4454106128203037 Coefficient of Determination: 0.1839135599893318 RMSE: 0.5659410783727593 NRMSE: 0.08849051338796955 MAPE: 339.9310458756504 Pearson Correlation: 0.34678748200463666 Spearman Correlation: 0.39748804994634673 Coefficient of Determination: 0.0987797182291762 RMSE: 0.4714983816344476 NRMSE: 0.15539462844718463 MAPE: 168.9329379356277 Predictor: ElasticNet Pearson Correlation: 0.4176546477814564 Spearman Correlation: 0.4415407903681112 Coefficient of Determination: 0.1720601383537167 RMSE: 0.5700363273794141 NRMSE: 0.0891308462793236 MAPE: 322.6862876963769 Pearson Correlation: 0.3710503297633012 Spearman Correlation: 0.4108428446005268 Coefficient of Determination: 0.1336828778697966 RMSE: 0.4622779481599226 NRMSE: 0.15235579334253596 MAPE: 155.99201612937426 Predictor: RandomForests Pearson Correlation: 0.4675690582172748 Spearman Correlation: 0.4757284062189877 Coefficient of Determination: 0.21164568809492623 RMSE: 0.5562421061560197 NRMSE: 0.08697398266844182 MAPE: 403.39167522660387 Pearson Correlation: 0.3844380312189888 Spearman Correlation: 0.3978438785411829 Coefficient of Determination: 0.13856104935750702 RMSE: 0.4609745832863918 NRMSE: 0.1519262353458545 MAPE: 189.97346503413263 Protein: BRCA2 x_train_column_count: 3 x_train columns: ['mRNA_BRCA2', 'DNA_BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.03262939127355345 Spearman Correlation: 0.0006863514914322238 Coefficient of Determination: 0.0010646771748825667 RMSE: 0.19750600275601585 NRMSE: 0.12776448239557 MAPE: 120.4199457443768 Pearson Correlation: -0.07897401064425702 Spearman Correlation: -0.04044488396852578 Coefficient of Determination: -0.012446345698319261 RMSE: 0.18588074751809686 NRMSE: 0.1860295711750369 MAPE: 104.18226869116702 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: RandomForests Pearson Correlation: 0.352599190403803 Spearman Correlation: 0.300353658421869 Coefficient of Determination: 0.0618619692454484 RMSE: 0.1914013450672991 NRMSE: 0.12381544581482094 MAPE: 109.7673289535253 Pearson Correlation: 0.014645645036438056 Spearman Correlation: 0.04242364383283092 Coefficient of Determination: -0.006752627486372731 RMSE: 0.18535733965001716 NRMSE: 0.18550574424541352 MAPE: 109.72221575354264 Protein: CDKN2A x_train_column_count: 3 x_train columns: ['mRNA_CDKN2A', 'DNA_CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 0.4894278811296978 Spearman Correlation: 0.42242544253713993 Coefficient of Determination: 0.2395396508271055 RMSE: 0.5604753869810942 NRMSE: 0.12670405492960193 MAPE: 162.737291117048 Pearson Correlation: 0.5966058458325866 Spearman Correlation: 0.5205931128670374 Coefficient of Determination: 0.35393841985841823 RMSE: 0.6003147429436976 NRMSE: 0.1621157825934911 MAPE: 197.61558547103047 Predictor: ElasticNet Pearson Correlation: 0.48939319497627054 Spearman Correlation: 0.42048886518392053 Coefficient of Determination: 0.23613312787145158 RMSE: 0.5617293240717384 NRMSE: 0.1269875266354105 MAPE: 168.58473884259763 Pearson Correlation: 0.5963485322693421 Spearman Correlation: 0.519539557116379 Coefficient of Determination: 0.3445208457900786 RMSE: 0.6046742768342892 NRMSE: 0.1632930804305399 MAPE: 225.51675220902246 Predictor: RandomForests Pearson Correlation: 0.6041562273678246 Spearman Correlation: 0.5147069169225836 Coefficient of Determination: 0.3644871906789572 RMSE: 0.5123661294404889 NRMSE: 0.11582821960901747 MAPE: 223.19924217348762 Pearson Correlation: 0.6756320582291276 Spearman Correlation: 0.5195553010106929 Coefficient of Determination: 0.4427695893058061 RMSE: 0.5575187226724603 NRMSE: 0.15055866126720505 MAPE: 518.4283627487548 Protein: TP53 x_train_column_count: 3 x_train columns: ['mRNA_TP53', 'DNA_TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.5092263411661889 Spearman Correlation: 0.41848196334947646 Coefficient of Determination: 0.2593114665375037 RMSE: 0.38971130016880456 NRMSE: 0.09365808703888599 MAPE: 696.5034481336385 Pearson Correlation: 0.5069920231554162 Spearman Correlation: 0.4382743147010049 Coefficient of Determination: 0.2505083237794835 RMSE: 0.3641593665394239 NRMSE: 0.13095018394743568 MAPE: 506.33935148157053 Predictor: ElasticNet Pearson Correlation: 0.5041857000573142 Spearman Correlation: 0.4077886125911703 Coefficient of Determination: 0.23909361412487273 RMSE: 0.39499427643112417 NRMSE: 0.09492772805362273 MAPE: 590.0747418206565 Pearson Correlation: 0.48225349749248586 Spearman Correlation: 0.4064822944103015 Coefficient of Determination: 0.23089822774927415 RMSE: 0.3688926345124157 NRMSE: 0.13265224729850614 MAPE: 466.65532752828176 Predictor: RandomForests Pearson Correlation: 0.5574991678980549 Spearman Correlation: 0.4601232838711712 Coefficient of Determination: 0.29995734650255645 RMSE: 0.3788675759829316 NRMSE: 0.09105204902257429 MAPE: 660.8973682526181 Pearson Correlation: 0.5115748976089421 Spearman Correlation: 0.4910781963197371 Coefficient of Determination: 0.25968208191413633 RMSE: 0.3619238543568273 NRMSE: 0.13014630312374673 MAPE: 341.63644096631134 Protein: CTNNB1 x_train_column_count: 3 x_train columns: ['mRNA_CTNNB1', 'DNA_CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 0.09332202022972685 Spearman Correlation: 0.15755303042235122 Coefficient of Determination: 0.008708999459757338 RMSE: 0.7340178555617521 NRMSE: 0.1479367667456219 MAPE: 627.6931224228314 Pearson Correlation: 0.02184549554468002 Spearman Correlation: -0.017788508438201154 Coefficient of Determination: -0.018418053434899218 RMSE: 0.7578418041543133 NRMSE: 0.18802208211043353 MAPE: 283.2729660943674 Predictor: ElasticNet Pearson Correlation: 0.09074559255102044 Spearman Correlation: 0.1504260801457697 Coefficient of Determination: 0.0077919913236362826 RMSE: 0.7343572840201401 NRMSE: 0.14800517645567854 MAPE: 640.5287939041052 Pearson Correlation: 0.0031806984452856938 Spearman Correlation: -0.03286020876012097 Coefficient of Determination: -0.019275025704874382 RMSE: 0.7581605891772021 NRMSE: 0.18810117331841467 MAPE: 293.07272021444817 Predictor: RandomForests Pearson Correlation: 0.34309296408022605 Spearman Correlation: 0.32364019578930675 Coefficient of Determination: 0.08671314141692965 RMSE: 0.7045464762769126 NRMSE: 0.1419969922157552 MAPE: 604.0148832752354 Pearson Correlation: -0.04539183929711445 Spearman Correlation: -0.039027616132749444 Coefficient of Determination: -0.060229416319445894 RMSE: 0.773242005078679 NRMSE: 0.1918429030612512 MAPE: 379.1313698002579 Protein: CCNE1 x_train_column_count: 3 x_train columns: ['mRNA_CCNE1', 'DNA_CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.722879968869401 Spearman Correlation: 0.7012303297288327 Coefficient of Determination: 0.5225554493926261 RMSE: 0.3342040150181911 NRMSE: 0.08065352583878926 MAPE: 92.66847666958556 Pearson Correlation: 0.7574252905876393 Spearman Correlation: 0.6898839137645107 Coefficient of Determination: 0.5203118095417595 RMSE: 0.37195137036806825 NRMSE: 0.1324849048506031 MAPE: 53.05461907939909 Predictor: ElasticNet Pearson Correlation: 0.7222994006556637 Spearman Correlation: 0.6782361999826809 Coefficient of Determination: 0.5172216396633345 RMSE: 0.33606562353468084 NRMSE: 0.08110278821697536 MAPE: 95.4619589575681 Pearson Correlation: 0.7447601922651653 Spearman Correlation: 0.6697736806165253 Coefficient of Determination: 0.492322434129536 RMSE: 0.38264904699474683 NRMSE: 0.13629529723766584 MAPE: 55.10121699265444 Predictor: RandomForests Pearson Correlation: 0.8583409435301661 Spearman Correlation: 0.7205259681179281 Coefficient of Determination: 0.7312774662682309 RMSE: 0.2507276530885667 NRMSE: 0.06050815770653443 MAPE: 54.067381214004286 Pearson Correlation: 0.8219395862432949 Spearman Correlation: 0.7051977409418355 Coefficient of Determination: 0.6753801857024391 RMSE: 0.30598079049312005 NRMSE: 0.10898692448552806 MAPE: 49.012415037783356 Protein: CCND1 x_train_column_count: 3 x_train columns: ['mRNA_CCND1', 'DNA_CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 0.4047788713220998 Spearman Correlation: 0.3765251379701422 Coefficient of Determination: 0.16384593466879305 RMSE: 0.21844816801096512 NRMSE: 0.13132472136379575 MAPE: 343.5497360598719 Pearson Correlation: 0.4762388818459446 Spearman Correlation: 0.46304750756023805 Coefficient of Determination: 0.10601865621769135 RMSE: 0.2221440693513327 NRMSE: 0.15821325661738128 MAPE: 1127.5581988167357 Predictor: ElasticNet Pearson Correlation: 0.4009831618273184 Spearman Correlation: 0.36844510692818 Coefficient of Determination: 0.15257757624444812 RMSE: 0.21991519098365817 NRMSE: 0.13220665315053215 MAPE: 356.2353544059898 Pearson Correlation: 0.4809675866541745 Spearman Correlation: 0.4518632328553313 Coefficient of Determination: 0.21351435701939514 RMSE: 0.20836074180656347 NRMSE: 0.14839663110831539 MAPE: 1207.9411522040425 Predictor: RandomForests Pearson Correlation: 0.4690056136004898 Spearman Correlation: 0.4039306298985853 Coefficient of Determination: 0.21318648384576055 RMSE: 0.21190497841461634 NRMSE: 0.1273911449992283 MAPE: 314.873635695826 Pearson Correlation: 0.511752113664257 Spearman Correlation: 0.46486934141170444 Coefficient of Determination: 0.26107166697014894 RMSE: 0.201962926432947 NRMSE: 0.14384004218630492 MAPE: 1141.4580559848046 Protein: ERBB2 x_train_column_count: 3 x_train columns: ['mRNA_ERBB2', 'DNA_ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 0.8299714239121488 Spearman Correlation: 0.6256632053976661 Coefficient of Determination: 0.6888525645107597 RMSE: 0.5684806897383323 NRMSE: 0.09685004169520288 MAPE: 291.2746898372921 Pearson Correlation: 0.7921851259713261 Spearman Correlation: 0.5722807530972589 Coefficient of Determination: 0.6197226252124242 RMSE: 0.5593413363496379 NRMSE: 0.10371617584825477 MAPE: 288.31820667795165 Predictor: ElasticNet Pearson Correlation: 0.8293787347103426 Spearman Correlation: 0.6265356551907318 Coefficient of Determination: 0.6855972142840661 RMSE: 0.5714467891618792 NRMSE: 0.09735536554881496 MAPE: 296.0500769994241 Pearson Correlation: 0.7958296534989578 Spearman Correlation: 0.5837089064481514 Coefficient of Determination: 0.6225632825289071 RMSE: 0.5572482911810043 NRMSE: 0.1033280717932513 MAPE: 285.5306027783209 Predictor: RandomForests Pearson Correlation: 0.84260378140247 Spearman Correlation: 0.6511641873981912 Coefficient of Determination: 0.7085731918046572 RMSE: 0.550170568575965 NRMSE: 0.09373061120261088 MAPE: 409.833532108463 Pearson Correlation: 0.800573834774456 Spearman Correlation: 0.6839862179333472 Coefficient of Determination: 0.6316305147340051 RMSE: 0.5505141620332454 NRMSE: 0.10207939218120628 MAPE: 293.3346995341213 Protein: ERBB3 x_train_column_count: 3 x_train columns: ['mRNA_ERBB3', 'DNA_ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.406476224875317 Spearman Correlation: 0.44252263799339286 Coefficient of Determination: 0.16522292138888917 RMSE: 0.4194967651461704 NRMSE: 0.11321013667528557 MAPE: 201.6235274916139 Pearson Correlation: 0.4080554527103394 Spearman Correlation: 0.45286368752312417 Coefficient of Determination: 0.1632265636637812 RMSE: 0.4258350723995506 NRMSE: 0.17086987689375904 MAPE: 198.80322557353688 Predictor: ElasticNet Pearson Correlation: 0.40040239542251976 Spearman Correlation: 0.44529574738360983 Coefficient of Determination: 0.15761922061703482 RMSE: 0.4214029610127247 NRMSE: 0.11372456422875497 MAPE: 196.72782385768102 Pearson Correlation: 0.42286074494379716 Spearman Correlation: 0.46967426308963695 Coefficient of Determination: 0.16947965415887156 RMSE: 0.4242409858417623 NRMSE: 0.17023023635792336 MAPE: 193.3225940972654 Predictor: RandomForests Pearson Correlation: 0.48996065959677 Spearman Correlation: 0.4663514535695274 Coefficient of Determination: 0.23831379250766205 RMSE: 0.4007111288442711 NRMSE: 0.1081404326156388 MAPE: 241.91682788049184 Pearson Correlation: 0.4307955532871659 Spearman Correlation: 0.47561773636705074 Coefficient of Determination: 0.17680156289238458 RMSE: 0.42236678109616 NRMSE: 0.16947819606131226 MAPE: 271.2299089364279 Fold: 2 Protein: RB1 x_train_column_count: 3 x_train columns: ['mRNA_RB1', 'DNA_RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.25982154799993096 Spearman Correlation: 0.3307634998978648 Coefficient of Determination: 0.06750723680508042 RMSE: 0.22696903752589032 NRMSE: 0.08300506053462929 MAPE: 209.2810230415421 Pearson Correlation: 0.053190262637052094 Spearman Correlation: 0.10110720905277534 Coefficient of Determination: -0.05266995676771269 RMSE: 0.25127082085207364 NRMSE: 0.1439600903232882 MAPE: 277.76026280802233 Predictor: ElasticNet Pearson Correlation: 0.25642965668492945 Spearman Correlation: 0.3289710199599084 Coefficient of Determination: 0.0621062903410905 RMSE: 0.22762538456708611 NRMSE: 0.08324509382939077 MAPE: 166.95409805107897 Pearson Correlation: 0.057496330205487944 Spearman Correlation: 0.10684811237928007 Coefficient of Determination: -0.029545375416894837 RMSE: 0.24849559264220938 NRMSE: 0.1423700843591854 MAPE: 217.25052427770913 Predictor: RandomForests Pearson Correlation: 0.3593880562044696 Spearman Correlation: 0.41281497651433136 Coefficient of Determination: 0.11859992967643984 RMSE: 0.22066345886362956 NRMSE: 0.08069904142174868 MAPE: 210.33895035749302 Pearson Correlation: 0.11225072097267615 Spearman Correlation: 0.10809789138175945 Coefficient of Determination: -0.01837941833127621 RMSE: 0.24714438680480813 NRMSE: 0.14159594069324755 MAPE: 297.3746238915008 Protein: CDH1 x_train_column_count: 3 x_train columns: ['mRNA_CDH1', 'DNA_CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.6321421347087326 Spearman Correlation: 0.5495152531665776 Coefficient of Determination: 0.3996036784741134 RMSE: 0.8682975901687989 NRMSE: 0.13929535416199548 MAPE: 415.0167837032381 Pearson Correlation: 0.6470288848328499 Spearman Correlation: 0.697312457321237 Coefficient of Determination: 0.39098114955052476 RMSE: 0.8979398739929576 NRMSE: 0.15946366080500046 MAPE: 262.94226429191514 Predictor: ElasticNet Pearson Correlation: 0.6042148871675715 Spearman Correlation: 0.5457144765673408 Coefficient of Determination: 0.34953087479277833 RMSE: 0.9037804194318271 NRMSE: 0.1449876344640775 MAPE: 514.6731617453066 Pearson Correlation: 0.6596710014235357 Spearman Correlation: 0.6870841869085944 Coefficient of Determination: 0.3742646630613016 RMSE: 0.9101798788569672 NRMSE: 0.16163734307529162 MAPE: 230.9206348645511 Predictor: RandomForests Pearson Correlation: 0.7478990504872847 Spearman Correlation: 0.6003377168530657 Coefficient of Determination: 0.557901737723171 RMSE: 0.7450904350251761 NRMSE: 0.1195300288802721 MAPE: 197.808680347168 Pearson Correlation: 0.6517072557345988 Spearman Correlation: 0.705744417422575 Coefficient of Determination: 0.388177660891623 RMSE: 0.9000042385544522 NRMSE: 0.15983026790169635 MAPE: 245.75256940292428 Protein: CDH2 x_train_column_count: 3 x_train columns: ['mRNA_CDH2', 'DNA_CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.14938620447186005 Spearman Correlation: 0.04481920699168721 Coefficient of Determination: 0.022316238086508178 RMSE: 0.3639678275852451 NRMSE: 0.13188195796262234 MAPE: 343.8512107378153 Pearson Correlation: 0.13149888837385415 Spearman Correlation: 0.05064871719832212 Coefficient of Determination: 0.016700069717749066 RMSE: 0.3838346346330534 NRMSE: 0.2022129917937031 MAPE: 121.20230431889176 Predictor: ElasticNet Pearson Correlation: 0.14703137875818367 Spearman Correlation: 0.03346468965108404 Coefficient of Determination: 0.02042216840236355 RMSE: 0.364320214979518 NRMSE: 0.13200964380734764 MAPE: 398.60075060181646 Pearson Correlation: 0.11717867760285976 Spearman Correlation: 0.063681592039801 Coefficient of Determination: 0.011366622098089696 RMSE: 0.38487419204171014 NRMSE: 0.20276065475785107 MAPE: 124.75803606638401 Predictor: RandomForests Pearson Correlation: 0.23269711502162294 Spearman Correlation: 0.1783552138486899 Coefficient of Determination: 0.046284439956497114 RMSE: 0.35947875554582365 NRMSE: 0.1302553647169446 MAPE: 407.5716373044224 Pearson Correlation: 0.19590961313749478 Spearman Correlation: 0.1023977451092562 Coefficient of Determination: 0.037813287597198486 RMSE: 0.37969146366717804 NRMSE: 0.20003027319322192 MAPE: 125.00119717504997 Protein: CDH3 x_train_column_count: 3 x_train columns: ['mRNA_CDH3', 'DNA_CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.3353915674508605 Spearman Correlation: 0.350065975213623 Coefficient of Determination: 0.1124875035171451 RMSE: 0.1956760883323652 NRMSE: 0.14726550038936817 MAPE: 272.21772308698814 Pearson Correlation: 0.08053707455148917 Spearman Correlation: 0.16048190420446787 Coefficient of Determination: -0.20288164561325783 RMSE: 0.21707888346885532 NRMSE: 0.17862164360146082 MAPE: 646.4624885962164 Predictor: ElasticNet Pearson Correlation: 0.3347814977813175 Spearman Correlation: 0.3576943411264357 Coefficient of Determination: 0.10713006110863821 RMSE: 0.19626579613481562 NRMSE: 0.14770931350599112 MAPE: 229.722930390829 Pearson Correlation: 0.08911708046773059 Spearman Correlation: 0.2003219198127012 Coefficient of Determination: -0.17066142577967636 RMSE: 0.21415182715971018 NRMSE: 0.17621313845117273 MAPE: 545.8608389964918 Predictor: RandomForests Pearson Correlation: 0.42423575986792816 Spearman Correlation: 0.3900920743897405 Coefficient of Determination: 0.17872988250879573 RMSE: 0.18823203180742976 NRMSE: 0.14166311576274318 MAPE: 417.9297769450251 Pearson Correlation: 0.13036419268148458 Spearman Correlation: 0.22635278212279497 Coefficient of Determination: -0.22106729218730203 RMSE: 0.21871367056532542 NRMSE: 0.17996681524341765 MAPE: 756.7853788183097 Protein: PTEN x_train_column_count: 3 x_train columns: ['mRNA_PTEN', 'DNA_PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.430308333743975 Spearman Correlation: 0.4633292902892238 Coefficient of Determination: 0.18516526208951634 RMSE: 0.5630475366114667 NRMSE: 0.08803807937009876 MAPE: 291.9436706305024 Pearson Correlation: 0.3937671051577029 Spearman Correlation: 0.34454687347575846 Coefficient of Determination: 0.09129103759274904 RMSE: 0.4877177347618037 NRMSE: 0.16357584342695322 MAPE: 582.5515737502983 Predictor: ElasticNet Pearson Correlation: 0.4208192666365726 Spearman Correlation: 0.4613671016891204 Coefficient of Determination: 0.17449448242999 RMSE: 0.5667222779527318 NRMSE: 0.0886126617078777 MAPE: 267.2604035854236 Pearson Correlation: 0.3819278789559435 Spearman Correlation: 0.336713491366696 Coefficient of Determination: 0.12179992124427108 RMSE: 0.47946054881547545 NRMSE: 0.1608064625756223 MAPE: 526.5606276185691 Predictor: RandomForests Pearson Correlation: 0.4822582186220226 Spearman Correlation: 0.4976141801724072 Coefficient of Determination: 0.22618424042930263 RMSE: 0.5486925710344498 NRMSE: 0.0857935378054022 MAPE: 279.1217603166806 Pearson Correlation: 0.331205192778205 Spearman Correlation: 0.32553763483158277 Coefficient of Determination: 0.06697912535133244 RMSE: 0.4941989547437926 NRMSE: 0.16574958235302947 MAPE: 614.5946555477958 Protein: BRCA2 x_train_column_count: 3 x_train columns: ['mRNA_BRCA2', 'DNA_BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.04354041876643122 Spearman Correlation: 0.06411070678083816 Coefficient of Determination: 0.0018957680663561627 RMSE: 0.19513916273414944 NRMSE: 0.12571374632575258 MAPE: 115.5200051763763 Pearson Correlation: -0.08069036425117287 Spearman Correlation: -0.14521997853867918 Coefficient of Determination: -0.0272601331885014 RMSE: 0.19580321210540141 NRMSE: 0.1325385743912338 MAPE: 119.78626761553635 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: RandomForests Pearson Correlation: 0.3183012930259188 Spearman Correlation: 0.25277475189632104 Coefficient of Determination: 0.05746025738342042 RMSE: 0.18962968538965805 NRMSE: 0.1221643970943199 MAPE: 117.75217305316465 Pearson Correlation: 0.10589600630793161 Spearman Correlation: 0.06964839245539821 Coefficient of Determination: -0.006212583065698718 RMSE: 0.19378692305823023 NRMSE: 0.1311737547184652 MAPE: 109.48183849716145 Protein: CDKN2A x_train_column_count: 3 x_train columns: ['mRNA_CDKN2A', 'DNA_CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.5114269887242209 Spearman Correlation: 0.421390017782988 Coefficient of Determination: 0.2615575647955246 RMSE: 0.5700300951369379 NRMSE: 0.12886404320943548 MAPE: 165.43474584850907 Pearson Correlation: 0.5556238442766467 Spearman Correlation: 0.5176421812506098 Coefficient of Determination: 0.29610562447046396 RMSE: 0.5649990242763141 NRMSE: 0.15263643404914473 MAPE: 188.81134911787157 Predictor: ElasticNet Pearson Correlation: 0.5109902267666916 Spearman Correlation: 0.41962690751761317 Coefficient of Determination: 0.25851519510048104 RMSE: 0.5712031450677845 NRMSE: 0.12912922913253858 MAPE: 190.4508564795669 Pearson Correlation: 0.5609227845296779 Spearman Correlation: 0.5202175397522194 Coefficient of Determination: 0.2873525267107909 RMSE: 0.5685011207014886 NRMSE: 0.1535825374706853 MAPE: 192.3551947209985 Predictor: RandomForests Pearson Correlation: 0.6099109413701264 Spearman Correlation: 0.4890325719324427 Coefficient of Determination: 0.37084429209229297 RMSE: 0.5261608528001954 NRMSE: 0.11894672833733363 MAPE: 258.92294088634793 Pearson Correlation: 0.6814150338271348 Spearman Correlation: 0.5686824725091613 Coefficient of Determination: 0.44683974780220026 RMSE: 0.500863556855956 NRMSE: 0.1353100164404463 MAPE: 210.33707010811864 Protein: TP53 x_train_column_count: 3 x_train columns: ['mRNA_TP53', 'DNA_TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 0.5089851407935634 Spearman Correlation: 0.4318947211131587 Coefficient of Determination: 0.2590658735486435 RMSE: 0.39193020494550723 NRMSE: 0.10497661843993766 MAPE: 342.2246604368846 Pearson Correlation: 0.5108069242821148 Spearman Correlation: 0.4486684225929178 Coefficient of Determination: 0.25353443402639964 RMSE: 0.35370012110640336 NRMSE: 0.11648283257250233 MAPE: 1890.2813927619227 Predictor: ElasticNet Pearson Correlation: 0.5047552086069204 Spearman Correlation: 0.4241886303292129 Coefficient of Determination: 0.23777821348025652 RMSE: 0.39752057733164303 NRMSE: 0.10647397276862007 MAPE: 297.6981878271754 Pearson Correlation: 0.5163195907367896 Spearman Correlation: 0.44063018242122726 Coefficient of Determination: 0.2552192343397168 RMSE: 0.3533007385145925 NRMSE: 0.11635130529049645 MAPE: 1566.664019627204 Predictor: RandomForests Pearson Correlation: 0.5650362928773421 Spearman Correlation: 0.49644063857988907 Coefficient of Determination: 0.31189271803654317 RMSE: 0.37770002396838825 NRMSE: 0.10116513297666754 MAPE: 417.0528880928532 Pearson Correlation: 0.5337538251307946 Spearman Correlation: 0.4209440277073127 Coefficient of Determination: 0.27729528682853977 RMSE: 0.3480252568311374 NRMSE: 0.11461394922810386 MAPE: 1960.7206700126103 Protein: CTNNB1 x_train_column_count: 3 x_train columns: ['mRNA_CTNNB1', 'DNA_CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.10148571420360313 Spearman Correlation: 0.1309787120425295 Coefficient of Determination: 0.010299350187415568 RMSE: 0.7212404940853105 NRMSE: 0.14186477066980932 MAPE: 590.4196344581454 Pearson Correlation: 0.063902372767457 Spearman Correlation: 0.01468637206126232 Coefficient of Determination: -0.13222004207433025 RMSE: 0.8156370677085635 NRMSE: 0.2029907338564405 MAPE: 176.6552604089487 Predictor: ElasticNet Pearson Correlation: 0.10134580154057388 Spearman Correlation: 0.13328926848956144 Coefficient of Determination: 0.008871705954480391 RMSE: 0.7217605017123417 NRMSE: 0.14196705383799013 MAPE: 604.0615761785913 Pearson Correlation: 0.06926825821924563 Spearman Correlation: 0.01852502194907814 Coefficient of Determination: -0.12198612236178308 RMSE: 0.8119425066741507 NRMSE: 0.20207125424308772 MAPE: 213.49006652074735 Predictor: RandomForests Pearson Correlation: 0.3190295856959207 Spearman Correlation: 0.2991024190538199 Coefficient of Determination: 0.07675539297584266 RMSE: 0.696604962942381 NRMSE: 0.13701907217592074 MAPE: 629.8256044860123 Pearson Correlation: 0.02184443404140938 Spearman Correlation: 0.08434478568208267 Coefficient of Determination: -0.15739411147330018 RMSE: 0.8246547592367274 NRMSE: 0.20523500142772141 MAPE: 562.1596295599475 Protein: CCNE1 x_train_column_count: 3 x_train columns: ['mRNA_CCNE1', 'DNA_CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.7307115117358941 Spearman Correlation: 0.6957595752060368 Coefficient of Determination: 0.5339393133833559 RMSE: 0.3500794461341022 NRMSE: 0.08448474699763549 MAPE: 91.51571756250921 Pearson Correlation: 0.7731113386348978 Spearman Correlation: 0.7420446785679446 Coefficient of Determination: 0.463079226242613 RMSE: 0.3064892684884463 NRMSE: 0.16657115989132895 MAPE: 56.19732894201306 Predictor: ElasticNet Pearson Correlation: 0.7299549010727591 Spearman Correlation: 0.6731307069987448 Coefficient of Determination: 0.5290997466495517 RMSE: 0.35189236165875853 NRMSE: 0.08492225828577322 MAPE: 94.30897906909787 Pearson Correlation: 0.7640911338462586 Spearman Correlation: 0.710823334308848 Coefficient of Determination: 0.43108086584749095 RMSE: 0.3154898845147165 NRMSE: 0.17146282562118084 MAPE: 58.176193391718165 Predictor: RandomForests Pearson Correlation: 0.8576015896223816 Spearman Correlation: 0.7101682702645096 Coefficient of Determination: 0.7315699874654313 RMSE: 0.26568125478367666 NRMSE: 0.06411691357571173 MAPE: 67.82534859215743 Pearson Correlation: 0.8352160796597063 Spearman Correlation: 0.7370836679134409 Coefficient of Determination: 0.6942453932120536 RMSE: 0.23128457717338924 NRMSE: 0.12569882291392304 MAPE: 40.51900629093152 Protein: CCND1 x_train_column_count: 3 x_train columns: ['mRNA_CCND1', 'DNA_CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.438278291986536 Spearman Correlation: 0.3720896586378001 Coefficient of Determination: 0.19208786122663546 RMSE: 0.21459250255865517 NRMSE: 0.12900680679482943 MAPE: 557.5215311736496 Pearson Correlation: 0.26793008590807127 Spearman Correlation: 0.3661593990830163 Coefficient of Determination: 0.05985053919515271 RMSE: 0.22827563146828242 NRMSE: 0.17660737719586125 MAPE: 329.6764330254307 Predictor: ElasticNet Pearson Correlation: 0.43583214123055813 Spearman Correlation: 0.3685966435926813 Coefficient of Determination: 0.18563649637418111 RMSE: 0.2154475842715227 NRMSE: 0.12952085719272505 MAPE: 568.7752048768627 Pearson Correlation: 0.268824501378427 Spearman Correlation: 0.3647644132279778 Coefficient of Determination: 0.06763357938709902 RMSE: 0.22732877628596504 NRMSE: 0.17587483465832537 MAPE: 343.8556794270337 Predictor: RandomForests Pearson Correlation: 0.5040707623731179 Spearman Correlation: 0.41626162506331177 Coefficient of Determination: 0.24934033281191292 RMSE: 0.206849282485278 NRMSE: 0.12435180681083431 MAPE: 488.9863622367476 Pearson Correlation: 0.32093332535895036 Spearman Correlation: 0.3843632172233007 Coefficient of Determination: 0.09288217954551525 RMSE: 0.22422960484198548 NRMSE: 0.17347713440148657 MAPE: 339.17834391246726 Protein: ERBB2 x_train_column_count: 3 x_train columns: ['mRNA_ERBB2', 'DNA_ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.8201830410950425 Spearman Correlation: 0.6324311838599934 Coefficient of Determination: 0.672700220899912 RMSE: 0.5623804677776286 NRMSE: 0.10092429836470193 MAPE: 231.91996390578703 Pearson Correlation: 0.8392149687835659 Spearman Correlation: 0.5356648131889573 Coefficient of Determination: 0.6959840904398478 RMSE: 0.5829159880152919 NRMSE: 0.09930933233645534 MAPE: 517.3102898577588 Predictor: ElasticNet Pearson Correlation: 0.8200039213244544 Spearman Correlation: 0.634811871059614 Coefficient of Determination: 0.6697900892139108 RMSE: 0.5648750912308448 NRMSE: 0.10137198127000427 MAPE: 230.21236907982626 Pearson Correlation: 0.8400346589301866 Spearman Correlation: 0.5386206223783047 Coefficient of Determination: 0.6912679926934737 RMSE: 0.5874198793687118 NRMSE: 0.10007664435468794 MAPE: 572.5700147444735 Predictor: RandomForests Pearson Correlation: 0.8393681646532969 Spearman Correlation: 0.6676315422093884 Coefficient of Determination: 0.702884506830249 RMSE: 0.5358213595112853 NRMSE: 0.09615802442641015 MAPE: 278.44547541829206 Pearson Correlation: 0.8260087732684012 Spearman Correlation: 0.5016052552161129 Coefficient of Determination: 0.6598165722013368 RMSE: 0.6166154296199134 NRMSE: 0.10505058684769468 MAPE: 1435.1249821672902 Protein: ERBB3 x_train_column_count: 3 x_train columns: ['mRNA_ERBB3', 'DNA_ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.41417858451321204 Spearman Correlation: 0.45631530527777064 Coefficient of Determination: 0.1715438998693679 RMSE: 0.4051581685053786 NRMSE: 0.10934056098291947 MAPE: 181.64925990782857 Pearson Correlation: 0.37749998305640375 Spearman Correlation: 0.442722661203785 Coefficient of Determination: 0.13868797504756525 RMSE: 0.4805313657311283 NRMSE: 0.17734467787788127 MAPE: 301.6801834581831 Predictor: ElasticNet Pearson Correlation: 0.4140585906196491 Spearman Correlation: 0.45693109987646585 Coefficient of Determination: 0.16824337114705745 RMSE: 0.4059644314730568 NRMSE: 0.10955814821684072 MAPE: 180.31817888577942 Pearson Correlation: 0.38268466711064103 Spearman Correlation: 0.44375182908984495 Coefficient of Determination: 0.1431097667770912 RMSE: 0.479296305927402 NRMSE: 0.17688886729261696 MAPE: 297.6833470966977 Predictor: RandomForests Pearson Correlation: 0.4948025282576432 Spearman Correlation: 0.47521126721943224 Coefficient of Determination: 0.24314163899124053 RMSE: 0.3872551086637604 NRMSE: 0.10450903897852645 MAPE: 215.727702415682 Pearson Correlation: 0.43715709398351393 Spearman Correlation: 0.44368045103374026 Coefficient of Determination: 0.18883583916108804 RMSE: 0.46633269199872135 NRMSE: 0.1721045220858954 MAPE: 359.6369033984502 Fold: 3 Protein: RB1 x_train_column_count: 3 x_train columns: ['mRNA_RB1', 'DNA_RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.20906181056089138 Spearman Correlation: 0.2900890900991774 Coefficient of Determination: 0.04370684063499797 RMSE: 0.23526488614062563 NRMSE: 0.08603894314680574 MAPE: 185.93393348545305 Pearson Correlation: 0.23642252835836458 Spearman Correlation: 0.27571665482113245 Coefficient of Determination: 0.033600853602256064 RMSE: 0.2179091837887196 NRMSE: 0.15290370334754452 MAPE: 235.6961917274888 Predictor: ElasticNet Pearson Correlation: 0.20858196467678577 Spearman Correlation: 0.2883692376359788 Coefficient of Determination: 0.040205970768808275 RMSE: 0.23569513042073573 NRMSE: 0.08619628818780564 MAPE: 145.72903338641834 Pearson Correlation: 0.22705415239555063 Spearman Correlation: 0.2737864561902268 Coefficient of Determination: 0.02548536776126309 RMSE: 0.21882223391156058 NRMSE: 0.15354437733244494 MAPE: 208.19626214044092 Predictor: RandomForests Pearson Correlation: 0.33203801860349313 Spearman Correlation: 0.369969664759332 Coefficient of Determination: 0.09720170753319812 RMSE: 0.22858985513978958 NRMSE: 0.08359781127113428 MAPE: 259.45265122676386 Pearson Correlation: 0.24718952901651486 Spearman Correlation: 0.27598668290184375 Coefficient of Determination: 0.03326122664768105 RMSE: 0.21794747093520436 NRMSE: 0.15293056888109544 MAPE: 208.51264990076587 Protein: CDH1 x_train_column_count: 3 x_train columns: ['mRNA_CDH1', 'DNA_CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.6328183131710179 Spearman Correlation: 0.6075465134823047 Coefficient of Determination: 0.4004590174846122 RMSE: 0.9095770982875896 NRMSE: 0.14483250506155687 MAPE: 508.3264784302216 Pearson Correlation: 0.6721696534233547 Spearman Correlation: 0.4740682552151524 Coefficient of Determination: 0.43660925129188144 RMSE: 0.7067138028288734 NRMSE: 0.1389363824222218 MAPE: 238.48389384100494 Predictor: ElasticNet Pearson Correlation: 0.6128883736434553 Spearman Correlation: 0.6065212138576584 Coefficient of Determination: 0.36364976288921436 RMSE: 0.9370832701820441 NRMSE: 0.14921232925417088 MAPE: 590.283204836288 Pearson Correlation: 0.635884770357738 Spearman Correlation: 0.4735146323520244 Coefficient of Determination: 0.3613743023716355 RMSE: 0.7524227409295526 NRMSE: 0.1479225299668841 MAPE: 281.1017337415249 Predictor: RandomForests Pearson Correlation: 0.7276193835823498 Spearman Correlation: 0.6282039002441692 Coefficient of Determination: 0.52828658097083 RMSE: 0.8068061403091166 NRMSE: 0.12846822399113347 MAPE: 278.7769631566057 Pearson Correlation: 0.7454686209002703 Spearman Correlation: 0.4734637054013533 Coefficient of Determination: 0.5527506644339515 RMSE: 0.6296708231298473 NRMSE: 0.12379011975186714 MAPE: 177.4955738279887 Protein: CDH2 x_train_column_count: 3 x_train columns: ['mRNA_CDH2', 'DNA_CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.14931543567140948 Spearman Correlation: 0.032234905130690474 Coefficient of Determination: 0.022295099329742607 RMSE: 0.3769641419583058 NRMSE: 0.1365911087608906 MAPE: 217.6193470243414 Pearson Correlation: 0.12832620363829544 Spearman Correlation: 0.09770944774872506 Coefficient of Determination: 0.012369155985872848 RMSE: 0.3299189033662857 NRMSE: 0.17383549189953304 MAPE: 391.30515551810186 Predictor: ElasticNet Pearson Correlation: 0.14809897776255532 Spearman Correlation: 0.03249047869973665 Coefficient of Determination: 0.020614481332783874 RMSE: 0.377287992592067 NRMSE: 0.1367084544503468 MAPE: 228.76083452255043 Pearson Correlation: 0.14137437871442668 Spearman Correlation: 0.11471714111148519 Coefficient of Determination: 0.011494593226163197 RMSE: 0.33006494525080726 NRMSE: 0.17391244190929211 MAPE: 529.6816948150797 Predictor: RandomForests Pearson Correlation: 0.2998198410354794 Spearman Correlation: 0.258562062688629 Coefficient of Determination: 0.06758489183196303 RMSE: 0.36812964803246534 NRMSE: 0.13338997319822646 MAPE: 341.91459703673723 Pearson Correlation: 0.04221775449210925 Spearman Correlation: -0.08782037960224189 Coefficient of Determination: -0.014558251305437198 RMSE: 0.33438621956538456 NRMSE: 0.176189337347664 MAPE: 273.39915855543035 Protein: CDH3 x_train_column_count: 3 x_train columns: ['mRNA_CDH3', 'DNA_CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.3037049619355422 Spearman Correlation: 0.33579287082700443 Coefficient of Determination: 0.09223670390426908 RMSE: 0.20247300005295082 NRMSE: 0.1420504294023621 MAPE: 364.2347372961034 Pearson Correlation: 0.22434377221005566 Spearman Correlation: 0.2938714946570406 Coefficient of Determination: 0.02269108262028885 RMSE: 0.1861793243256984 NRMSE: 0.16194153481059642 MAPE: 148.21390169787855 Predictor: ElasticNet Pearson Correlation: 0.30261469765849924 Spearman Correlation: 0.3386347347546788 Coefficient of Determination: 0.08667683033336748 RMSE: 0.2030921073878006 NRMSE: 0.14248478095905637 MAPE: 297.3853059154741 Pearson Correlation: 0.22440362464908517 Spearman Correlation: 0.31279442387062184 Coefficient of Determination: 0.042925379414417986 RMSE: 0.18424190653417474 NRMSE: 0.16025634010992262 MAPE: 132.17162239671106 Predictor: RandomForests Pearson Correlation: 0.3891115963597522 Spearman Correlation: 0.3693754713573251 Coefficient of Determination: 0.14910315985121847 RMSE: 0.19602852130197138 NRMSE: 0.13752913039651132 MAPE: 478.8616132793284 Pearson Correlation: 0.265388563260742 Spearman Correlation: 0.30083105858774284 Coefficient of Determination: 0.053494817443916265 RMSE: 0.18322174593174018 NRMSE: 0.1593689893027914 MAPE: 189.0779148619557 Protein: PTEN x_train_column_count: 3 x_train columns: ['mRNA_PTEN', 'DNA_PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 0.4173920584080784 Spearman Correlation: 0.43230689448688175 Coefficient of Determination: 0.17421613042213258 RMSE: 0.5718564298008542 NRMSE: 0.08941543738579534 MAPE: 346.9712456051446 Pearson Correlation: 0.37336343556306056 Spearman Correlation: 0.38894001172084447 Coefficient of Determination: 0.12725347431953993 RMSE: 0.439973605396084 NRMSE: 0.10519141333048439 MAPE: 130.97878252566588 Predictor: ElasticNet Pearson Correlation: 0.40831701186122843 Spearman Correlation: 0.43003304886309834 Coefficient of Determination: 0.16476229023457822 RMSE: 0.5751205127800535 NRMSE: 0.08992580920648166 MAPE: 328.9002836074039 Pearson Correlation: 0.37065020826290584 Spearman Correlation: 0.37858078030898146 Coefficient of Determination: 0.12478462252968858 RMSE: 0.4405954712448972 NRMSE: 0.10534009258473132 MAPE: 116.1786551173178 Predictor: RandomForests Pearson Correlation: 0.4633203795379582 Spearman Correlation: 0.4620914068616879 Coefficient of Determination: 0.20670767363397735 RMSE: 0.56049331553177 NRMSE: 0.08763870151384097 MAPE: 457.7437175681701 Pearson Correlation: 0.3834518426201456 Spearman Correlation: 0.4069254029650803 Coefficient of Determination: 0.14346586379011672 RMSE: 0.4358679110110523 NRMSE: 0.10420980036605278 MAPE: 125.56909459965324 Protein: BRCA2 x_train_column_count: 3 x_train columns: ['mRNA_BRCA2', 'DNA_BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.051588779626988955 Spearman Correlation: 0.04564328942333082 Coefficient of Determination: 0.0026614021834020507 RMSE: 0.1897970804221519 NRMSE: 0.12791974255395352 MAPE: 115.63062783871668 Pearson Correlation: -0.08034642559386035 Spearman Correlation: -0.05363408521303259 Coefficient of Determination: -0.013463242593510838 RMSE: 0.21556805164586199 NRMSE: 0.1482698496075095 MAPE: 108.67907953219245 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: RandomForests Pearson Correlation: 0.3199289145954756 Spearman Correlation: 0.247874160076966 Coefficient of Determination: 0.06179036158872442 RMSE: 0.18408489714994117 NRMSE: 0.1240698360539328 MAPE: 126.72589323119911 Pearson Correlation: -0.011497686176644754 Spearman Correlation: -0.08083916728760582 Coefficient of Determination: -0.015312829258522065 RMSE: 0.2157646695541058 NRMSE: 0.14840508536003813 MAPE: 122.91086514133818 Protein: CDKN2A x_train_column_count: 3 x_train columns: ['mRNA_CDKN2A', 'DNA_CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.5125835327926108 Spearman Correlation: 0.4336429518634918 Coefficient of Determination: 0.2627418780901536 RMSE: 0.5732160550929118 NRMSE: 0.13382892582483 MAPE: 188.7587520263011 Pearson Correlation: 0.5522357778133558 Spearman Correlation: 0.532722353146548 Coefficient of Determination: 0.29619350676231526 RMSE: 0.5507932739906384 NRMSE: 0.17004515883752844 MAPE: 119.44190896905158 Predictor: ElasticNet Pearson Correlation: 0.5125245649492034 Spearman Correlation: 0.4309781360534098 Coefficient of Determination: 0.2600003763261728 RMSE: 0.5742808210174861 NRMSE: 0.13407751704741458 MAPE: 202.90837987091717 Pearson Correlation: 0.5531133137197526 Spearman Correlation: 0.5295352809885411 Coefficient of Determination: 0.28657833079635153 RMSE: 0.5545428904274711 NRMSE: 0.17120276941973728 MAPE: 123.94314715236277 Predictor: RandomForests Pearson Correlation: 0.6267342324625859 Spearman Correlation: 0.4979066303432582 Coefficient of Determination: 0.3920174432495791 RMSE: 0.5205400181119146 NRMSE: 0.12153063553229236 MAPE: 264.0374073954278 Pearson Correlation: 0.6271026913419488 Spearman Correlation: 0.5728813153345717 Coefficient of Determination: 0.39022470913901564 RMSE: 0.5126806244426771 NRMSE: 0.15827872694349576 MAPE: 124.13607839156002 Protein: TP53 x_train_column_count: 3 x_train columns: ['mRNA_TP53', 'DNA_TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.5191360566570263 Spearman Correlation: 0.43024227009428323 Coefficient of Determination: 0.26950224532140754 RMSE: 0.3847076404534634 NRMSE: 0.0924555732885036 MAPE: 706.0433011042359 Pearson Correlation: 0.4779190135996074 Spearman Correlation: 0.4491402635943092 Coefficient of Determination: 0.20146229916852443 RMSE: 0.38465266630641193 NRMSE: 0.1434366635615645 MAPE: 423.4700386992424 Predictor: ElasticNet Pearson Correlation: 0.5132293989168437 Spearman Correlation: 0.4140644984745536 Coefficient of Determination: 0.24747364725672116 RMSE: 0.3904651027579275 NRMSE: 0.09383924603651227 MAPE: 595.9990850856484 Pearson Correlation: 0.4746791493317502 Spearman Correlation: 0.44686592102145917 Coefficient of Determination: 0.19591623427189409 RMSE: 0.3859861145273127 NRMSE: 0.1439339053087093 MAPE: 369.3489772331883 Predictor: RandomForests Pearson Correlation: 0.5661439386931005 Spearman Correlation: 0.4969297339041271 Coefficient of Determination: 0.3124832946569067 RMSE: 0.37321835689295585 NRMSE: 0.08969439002474307 MAPE: 671.5681223250726 Pearson Correlation: 0.47378867648689216 Spearman Correlation: 0.4489145730466492 Coefficient of Determination: 0.21270148958171364 RMSE: 0.3819361355432893 NRMSE: 0.14242367146959167 MAPE: 386.88985379521375 Protein: CTNNB1 x_train_column_count: 3 x_train columns: ['mRNA_CTNNB1', 'DNA_CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.0633800902975208 Spearman Correlation: 0.08633119498695128 Coefficient of Determination: 0.004017035846122119 RMSE: 0.7676509388043595 NRMSE: 0.15099349701108566 MAPE: 432.3318344203724 Pearson Correlation: 0.19702690249754248 Spearman Correlation: 0.24086335241087797 Coefficient of Determination: 0.012306409738177093 RMSE: 0.6091869629375852 NRMSE: 0.19915229753754132 MAPE: 1289.8785304708388 Predictor: ElasticNet Pearson Correlation: 0.06157050781645235 Spearman Correlation: 0.09384196776158865 Coefficient of Determination: 0.0032673446502176073 RMSE: 0.7679397955994693 NRMSE: 0.15105031384725992 MAPE: 436.39064636747247 Pearson Correlation: 0.22381867690559681 Spearman Correlation: 0.27540243643935713 Coefficient of Determination: 0.005982372221780774 RMSE: 0.6111341124113147 NRMSE: 0.1997888497209175 MAPE: 1332.576290352775 Predictor: RandomForests Pearson Correlation: 0.3508430461268562 Spearman Correlation: 0.309013951041836 Coefficient of Determination: 0.06480099241539428 RMSE: 0.7438576760962169 NRMSE: 0.14631346894103403 MAPE: 464.8922382972854 Pearson Correlation: 0.2558846976594461 Spearman Correlation: 0.22785221110455883 Coefficient of Determination: 0.029845022900138907 RMSE: 0.6037540275270192 NRMSE: 0.1973761899790837 MAPE: 1391.5187469220227 Protein: CCNE1 x_train_column_count: 3 x_train columns: ['mRNA_CCNE1', 'DNA_CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.7314003230267213 Spearman Correlation: 0.7217623240217748 Coefficient of Determination: 0.5349464325235923 RMSE: 0.3562654955534039 NRMSE: 0.08597762761623765 MAPE: 77.52738674237075 Pearson Correlation: 0.6703705524680661 Spearman Correlation: 0.6748238756094217 Coefficient of Determination: 0.4380789486264729 RMSE: 0.2735256035356803 NRMSE: 0.11914692840339777 MAPE: 98.41879547639402 Predictor: ElasticNet Pearson Correlation: 0.7305759271099245 Spearman Correlation: 0.6993992325896097 Coefficient of Determination: 0.5293131019079531 RMSE: 0.35841677474947153 NRMSE: 0.0864967962809739 MAPE: 79.93110263392181 Pearson Correlation: 0.672445000298457 Spearman Correlation: 0.6635569022057632 Coefficient of Determination: 0.4499890120968776 RMSE: 0.27061135546091375 NRMSE: 0.11787749072653819 MAPE: 103.06205491246747 Predictor: RandomForests Pearson Correlation: 0.8620691956243819 Spearman Correlation: 0.7258461435512167 Coefficient of Determination: 0.7409446961842998 RMSE: 0.26590010990733026 NRMSE: 0.06416972992912862 MAPE: 55.84380489692009 Pearson Correlation: 0.7701643879178106 Spearman Correlation: 0.6683266662561321 Coefficient of Determination: 0.5244794807311457 RMSE: 0.251619888021991 NRMSE: 0.10960486475671515 MAPE: 78.04060369885696 Protein: CCND1 x_train_column_count: 3 x_train columns: ['mRNA_CCND1', 'DNA_CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.41572433129704583 Spearman Correlation: 0.39279449001428085 Coefficient of Determination: 0.17282671963237584 RMSE: 0.22251267964118898 NRMSE: 0.1337681882153569 MAPE: 550.0812067345653 Pearson Correlation: 0.37718441084945487 Spearman Correlation: 0.3178967318794499 Coefficient of Determination: 0.12537428261043815 RMSE: 0.1961514566227935 NRMSE: 0.18586741267925055 MAPE: 335.21570950955544 Predictor: ElasticNet Pearson Correlation: 0.41572276118426993 Spearman Correlation: 0.3931825703607065 Coefficient of Determination: 0.16894416512499655 RMSE: 0.22303427907148374 NRMSE: 0.1340817587088551 MAPE: 559.7876675967377 Pearson Correlation: 0.3773192296054971 Spearman Correlation: 0.3189790396388983 Coefficient of Determination: 0.11720239336597071 RMSE: 0.19706567694475405 NRMSE: 0.1867337012543508 MAPE: 354.6280039683284 Predictor: RandomForests Pearson Correlation: 0.48860514451656034 Spearman Correlation: 0.43504145506937325 Coefficient of Determination: 0.23412216603759417 RMSE: 0.21410966174526241 NRMSE: 0.1287165368609626 MAPE: 533.2034154025292 Pearson Correlation: 0.36968779167919275 Spearman Correlation: 0.34354700584606596 Coefficient of Determination: 0.12687567696399638 RMSE: 0.1959830261855674 NRMSE: 0.18570781289792518 MAPE: 242.45342663339522 Protein: ERBB2 x_train_column_count: 3 x_train columns: ['mRNA_ERBB2', 'DNA_ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 0.8072174404386134 Spearman Correlation: 0.5979146922937387 Coefficient of Determination: 0.6515999961482668 RMSE: 0.5791780769065523 NRMSE: 0.0986725176595997 MAPE: 315.8108291382389 Pearson Correlation: 0.878528556241699 Spearman Correlation: 0.6958923376759953 Coefficient of Determination: 0.7693825066587203 RMSE: 0.5121813220759595 NRMSE: 0.09239146440507243 MAPE: 115.00149160867265 Predictor: ElasticNet Pearson Correlation: 0.80711665450936 Spearman Correlation: 0.599724051441762 Coefficient of Determination: 0.6486648059482842 RMSE: 0.5816126812079347 NRMSE: 0.09908729257167057 MAPE: 324.19866482791946 Pearson Correlation: 0.8778058752583066 Spearman Correlation: 0.7024510311244143 Coefficient of Determination: 0.7670061937579211 RMSE: 0.5148133510216606 NRMSE: 0.0928662513568188 MAPE: 120.78412217564257 Predictor: RandomForests Pearson Correlation: 0.8242163453946054 Spearman Correlation: 0.6402041160595304 Coefficient of Determination: 0.6769950273006478 RMSE: 0.5576704636110034 NRMSE: 0.09500834175698986 MAPE: 500.4934645193762 Pearson Correlation: 0.8707861704837472 Spearman Correlation: 0.7083132070906469 Coefficient of Determination: 0.7562631320029732 RMSE: 0.5265483136924883 NRMSE: 0.09498310009605461 MAPE: 184.73867419549478 Protein: ERBB3 x_train_column_count: 3 x_train columns: ['mRNA_ERBB3', 'DNA_ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.41551795068766123 Spearman Correlation: 0.44882116730356786 Coefficient of Determination: 0.1726551673436737 RMSE: 0.41022681554070656 NRMSE: 0.1487476986009879 MAPE: 207.46441821654065 Pearson Correlation: 0.39300851730124575 Spearman Correlation: 0.4283669372436066 Coefficient of Determination: 0.12955574654445734 RMSE: 0.46156353204872846 NRMSE: 0.12832794385173515 MAPE: 147.5233201189403 Predictor: ElasticNet Pearson Correlation: 0.41177558291815275 Spearman Correlation: 0.45488010697332815 Coefficient of Determination: 0.16669787239933387 RMSE: 0.4117010851470039 NRMSE: 0.14928226680264256 MAPE: 202.93045832686497 Pearson Correlation: 0.39623546111277685 Spearman Correlation: 0.4222571353757528 Coefficient of Determination: 0.12941818752482692 RMSE: 0.4616000017700479 NRMSE: 0.12833808348371387 MAPE: 140.4133220443644 Predictor: RandomForests Pearson Correlation: 0.5060684091191713 Spearman Correlation: 0.4922400329959107 Coefficient of Determination: 0.254755900166885 RMSE: 0.3893409099380018 NRMSE: 0.14117449696251158 MAPE: 238.344304367678 Pearson Correlation: 0.40530142451487444 Spearman Correlation: 0.3999364807568691 Coefficient of Determination: 0.137274337870261 RMSE: 0.45951253723688645 NRMSE: 0.12775770827466085 MAPE: 164.7657924578323 Fold: 4 Protein: RB1 x_train_column_count: 3 x_train columns: ['mRNA_RB1', 'DNA_RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.20469344872387418 Spearman Correlation: 0.2638035826457963 Coefficient of Determination: 0.04189940795047331 RMSE: 0.24618538056260422 NRMSE: 0.09003268744975286 MAPE: 265.65680235894604 Pearson Correlation: 0.31142795874807566 Spearman Correlation: 0.3860122944176362 Coefficient of Determination: 0.017855139745728166 RMSE: 0.16340372044825452 NRMSE: 0.15655896260324084 MAPE: 110.72740490569541 Predictor: ElasticNet Pearson Correlation: 0.20442852766702158 Spearman Correlation: 0.2646184280596264 Coefficient of Determination: 0.0388432358619244 RMSE: 0.24657771193999134 NRMSE: 0.09017616732738128 MAPE: 210.38271962572836 Pearson Correlation: 0.31239860709888695 Spearman Correlation: 0.38851606628511587 Coefficient of Determination: 0.01227173098127976 RMSE: 0.16386753022672737 NRMSE: 0.1570033440259144 MAPE: 102.1756080176068 Predictor: RandomForests Pearson Correlation: 0.3462170390140414 Spearman Correlation: 0.37509748290870165 Coefficient of Determination: 0.10412397390728556 RMSE: 0.23805683892960428 NRMSE: 0.08705999083148196 MAPE: 306.9852759388363 Pearson Correlation: 0.2419010168517363 Spearman Correlation: 0.33507815097347543 Coefficient of Determination: -0.0304798077326236 RMSE: 0.1673762793132277 NRMSE: 0.1603651164232052 MAPE: 110.36165825622047 Protein: CDH1 x_train_column_count: 3 x_train columns: ['mRNA_CDH1', 'DNA_CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 0.6286147487551993 Spearman Correlation: 0.6067670391716472 Coefficient of Determination: 0.39515650235256217 RMSE: 0.8702739454574308 NRMSE: 0.13857424054288567 MAPE: 525.00288828197 Pearson Correlation: 0.6640199683798836 Spearman Correlation: 0.43704534969263964 Coefficient of Determination: 0.4148442907794492 RMSE: 0.8922792210772202 NRMSE: 0.16187352074983133 MAPE: 268.48218125605763 Predictor: ElasticNet Pearson Correlation: 0.6101146633791258 Spearman Correlation: 0.6046399181239875 Coefficient of Determination: 0.36009222878580904 RMSE: 0.8951445375183613 NRMSE: 0.14253439978318544 MAPE: 601.3666523370377 Pearson Correlation: 0.5984222849208914 Spearman Correlation: 0.43423733463010766 Coefficient of Determination: 0.3242141759611985 RMSE: 0.958891778031604 NRMSE: 0.17395808897202641 MAPE: 309.9398081512885 Predictor: RandomForests Pearson Correlation: 0.7210350753965069 Spearman Correlation: 0.6197542197054043 Coefficient of Determination: 0.5187108406172025 RMSE: 0.7763141701129105 NRMSE: 0.12361296935016566 MAPE: 346.1931662651616 Pearson Correlation: 0.7573263588368068 Spearman Correlation: 0.4502703262535351 Coefficient of Determination: 0.5218686736792134 RMSE: 0.8065636687849284 NRMSE: 0.14632336794472775 MAPE: 166.38047571425295 Protein: CDH2 x_train_column_count: 3 x_train columns: ['mRNA_CDH2', 'DNA_CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.13282986793863621 Spearman Correlation: 0.040213172180825214 Coefficient of Determination: 0.017643773816595654 RMSE: 0.376001939188154 NRMSE: 0.13624245930435322 MAPE: 584.6956953205173 Pearson Correlation: 0.199277503184848 Spearman Correlation: 0.032386937492986205 Coefficient of Determination: -0.01617446114668586 RMSE: 0.33595142823568475 NRMSE: 0.17330662593149515 MAPE: 127.24977357056613 Predictor: ElasticNet Pearson Correlation: 0.13197897380579895 Spearman Correlation: 0.05540814490625363 Coefficient of Determination: 0.01583026411419486 RMSE: 0.3763488442791178 NRMSE: 0.13636815866335164 MAPE: 638.2918542616327 Pearson Correlation: 0.2026745691915227 Spearman Correlation: 0.008980161847404583 Coefficient of Determination: -0.022121965454436676 RMSE: 0.3369331285089894 NRMSE: 0.1738130537890457 MAPE: 141.90733084082612 Predictor: RandomForests Pearson Correlation: 0.2746635883531955 Spearman Correlation: 0.23027068428685687 Coefficient of Determination: 0.05535536594528101 RMSE: 0.36871415851626854 NRMSE: 0.13360176770645285 MAPE: 395.90996355029006 Pearson Correlation: 0.1659420975878766 Spearman Correlation: 0.01170280292879656 Coefficient of Determination: -0.027235437892395353 RMSE: 0.3377748816795384 NRMSE: 0.17424728740019932 MAPE: 158.52821883559227 Protein: CDH3 x_train_column_count: 3 x_train columns: ['mRNA_CDH3', 'DNA_CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.2601046552149239 Spearman Correlation: 0.32971494896928316 Coefficient of Determination: 0.06765443166447438 RMSE: 0.19882273960705912 NRMSE: 0.14169843323336168 MAPE: 171.39305572210003 Pearson Correlation: 0.39646604589223977 Spearman Correlation: 0.3050387161934688 Coefficient of Determination: 0.035114198763392945 RMSE: 0.2041152940367816 NRMSE: 0.1816715862690973 MAPE: 579.5580671701683 Predictor: ElasticNet Pearson Correlation: 0.2585402732845947 Spearman Correlation: 0.3309265441567785 Coefficient of Determination: 0.0628246488353148 RMSE: 0.19933705011951847 NRMSE: 0.14206497578254376 MAPE: 165.19569965309185 Pearson Correlation: 0.4135532481751863 Spearman Correlation: 0.3220264591827829 Coefficient of Determination: 0.015679514978452547 RMSE: 0.20616068609513216 NRMSE: 0.18349207513317917 MAPE: 491.046844980752 Predictor: RandomForests Pearson Correlation: 0.36864805089403657 Spearman Correlation: 0.3616203756772695 Coefficient of Determination: 0.13347585705457865 RMSE: 0.1916760857543874 NRMSE: 0.13660510409110097 MAPE: 236.82212495859406 Pearson Correlation: 0.34666151264379064 Spearman Correlation: 0.28083039109178015 Coefficient of Determination: 0.03155081912662705 RMSE: 0.20449185154803998 NRMSE: 0.18200673901066267 MAPE: 834.0365079413169 Protein: PTEN x_train_column_count: 3 x_train columns: ['mRNA_PTEN', 'DNA_PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 0.4023646675334011 Spearman Correlation: 0.4208824134682371 Coefficient of Determination: 0.1618973256792644 RMSE: 0.5142992432276398 NRMSE: 0.09948530703103524 MAPE: 236.83378449712592 Pearson Correlation: 0.47087385872999316 Spearman Correlation: 0.5017693487449969 Coefficient of Determination: 0.18121069024794068 RMSE: 0.6746449995895468 NRMSE: 0.10548745205058976 MAPE: 509.6268273390807 Predictor: ElasticNet Pearson Correlation: 0.40123879663459155 Spearman Correlation: 0.417911317862958 Coefficient of Determination: 0.15895282349734008 RMSE: 0.5152018936589686 NRMSE: 0.09965991443418613 MAPE: 217.9578633141627 Pearson Correlation: 0.4497530176245866 Spearman Correlation: 0.4910958989513586 Coefficient of Determination: 0.15631195378540763 RMSE: 0.6848258918874468 NRMSE: 0.10707933576537358 MAPE: 438.129029052725 Predictor: RandomForests Pearson Correlation: 0.4656404737865962 Spearman Correlation: 0.4504429893238428 Coefficient of Determination: 0.20610195518527785 RMSE: 0.500552503968117 NRMSE: 0.09682615753019905 MAPE: 219.70630611894583 Pearson Correlation: 0.4042714355078431 Spearman Correlation: 0.48504549399798236 Coefficient of Determination: 0.14330565070819468 RMSE: 0.6900843445923847 NRMSE: 0.10790154711787736 MAPE: 321.5505281120903 Protein: BRCA2 x_train_column_count: 3 x_train columns: ['mRNA_BRCA2', 'DNA_BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.03138112078165621 Spearman Correlation: 0.0209114132193999 Coefficient of Determination: 0.0009847747415129282 RMSE: 0.19170280556570432 NRMSE: 0.12349995526861288 MAPE: 112.5386450235546 Pearson Correlation: -0.15360301103548873 Spearman Correlation: -0.18366563174104417 Coefficient of Determination: -0.009459554875555387 RMSE: 0.20908937112560863 NRMSE: 0.20313547048567354 MAPE: 147.370917754084 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: RandomForests Pearson Correlation: 0.3453172669112552 Spearman Correlation: 0.26146163629950764 Coefficient of Determination: 0.05355778484123719 RMSE: 0.1865904735780575 NRMSE: 0.12020645745083428 MAPE: 118.00468086833884 Pearson Correlation: 0.12791025809156378 Spearman Correlation: -0.06975152162832544 Coefficient of Determination: 0.01615838057894281 RMSE: 0.20641919978567477 NRMSE: 0.20054133330646237 MAPE: 117.51014809136255 Protein: CDKN2A x_train_column_count: 3 x_train columns: ['mRNA_CDKN2A', 'DNA_CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.5188832504970193 Spearman Correlation: 0.47144283298498774 Coefficient of Determination: 0.2692398276463528 RMSE: 0.5761271558719838 NRMSE: 0.13024237727410054 MAPE: 176.62350044205323 Pearson Correlation: 0.5298305090772334 Spearman Correlation: 0.2798513697178269 Coefficient of Determination: 0.26785557984246733 RMSE: 0.5396401503553129 NRMSE: 0.16259118721160376 MAPE: 128.59754005088325 Predictor: ElasticNet Pearson Correlation: 0.5188571121545857 Spearman Correlation: 0.4699349759280952 Coefficient of Determination: 0.26665924679128006 RMSE: 0.5771435169979835 NRMSE: 0.13047214129037718 MAPE: 186.8440184581025 Pearson Correlation: 0.528452013323884 Spearman Correlation: 0.27101834187458695 Coefficient of Determination: 0.261332367304022 RMSE: 0.5420388445552823 NRMSE: 0.16331390315013025 MAPE: 133.91999859914563 Predictor: RandomForests Pearson Correlation: 0.6324201705536484 Spearman Correlation: 0.5249378582030331 Coefficient of Determination: 0.3993594896562267 RMSE: 0.5223218832526526 NRMSE: 0.11807887040864758 MAPE: 286.3003637639724 Pearson Correlation: 0.6232110935662796 Spearman Correlation: 0.4715259206137264 Coefficient of Determination: 0.3611191957059581 RMSE: 0.5040989536496223 NRMSE: 0.15188278205773495 MAPE: 126.65421282515818 Protein: TP53 x_train_column_count: 3 x_train columns: ['mRNA_TP53', 'DNA_TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 0.5024169899282644 Spearman Correlation: 0.4476400836830998 Coefficient of Determination: 0.2524228317685776 RMSE: 0.38918448287592083 NRMSE: 0.09353147870125472 MAPE: 716.9271318540175 Pearson Correlation: 0.5375616537301072 Spearman Correlation: 0.34889961221461613 Coefficient of Determination: 0.28608584424478156 RMSE: 0.3648531146737402 NRMSE: 0.11578227807620595 MAPE: 336.0228452994756 Predictor: ElasticNet Pearson Correlation: 0.49687737096815426 Spearman Correlation: 0.4340882887026487 Coefficient of Determination: 0.23120927085870802 RMSE: 0.3946676870009571 NRMSE: 0.09484923984642085 MAPE: 617.4656467615506 Pearson Correlation: 0.5437049126963156 Spearman Correlation: 0.3497425154927119 Coefficient of Determination: 0.261457685512289 RMSE: 0.3710929920425303 NRMSE: 0.11776243718029014 MAPE: 250.71548827537904 Predictor: RandomForests Pearson Correlation: 0.5500984751498655 Spearman Correlation: 0.4997504349151704 Coefficient of Determination: 0.2941271235364914 RMSE: 0.3781732002999231 NRMSE: 0.0908851719057734 MAPE: 695.2142859591731 Pearson Correlation: 0.5731182645219236 Spearman Correlation: 0.4295432697842317 Coefficient of Determination: 0.30903732874725187 RMSE: 0.3589404096871789 NRMSE: 0.11390594366818318 MAPE: 254.3949997626327 Protein: CTNNB1 x_train_column_count: 3 x_train columns: ['mRNA_CTNNB1', 'DNA_CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.11124579514054282 Spearman Correlation: 0.13475019397756866 Coefficient of Determination: 0.012375626936451556 RMSE: 0.7070109499801447 NRMSE: 0.170759093319521 MAPE: 563.6781647775337 Pearson Correlation: -0.07316120019751474 Spearman Correlation: 0.07713562513248295 Coefficient of Determination: -0.1642191967008928 RMSE: 0.8658400442507479 NRMSE: 0.18203684388418717 MAPE: 979.0041905196625 Predictor: ElasticNet Pearson Correlation: 0.10840044098123969 Spearman Correlation: 0.13510456005020563 Coefficient of Determination: 0.011292516908618322 RMSE: 0.707398526893942 NRMSE: 0.17085270188724327 MAPE: 584.7227114339586 Pearson Correlation: -0.09111810528208904 Spearman Correlation: 0.035748575418646115 Coefficient of Determination: -0.16339117706704687 RMSE: 0.8655320867464611 NRMSE: 0.1819720979620009 MAPE: 962.4060760848749 Predictor: RandomForests Pearson Correlation: 0.33046953393513023 Spearman Correlation: 0.3063937409450337 Coefficient of Determination: 0.06835642393636576 RMSE: 0.6866811683253319 NRMSE: 0.16584899244646217 MAPE: 574.9023597951262 Pearson Correlation: 0.053210235766702 Spearman Correlation: 0.11139604046333891 Coefficient of Determination: -0.13973728203284486 RMSE: 0.8566879672367678 NRMSE: 0.1801126833817105 MAPE: 959.2101617909703 Protein: CCNE1 x_train_column_count: 3 x_train columns: ['mRNA_CCNE1', 'DNA_CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.7286400817572335 Spearman Correlation: 0.7091225350184517 Coefficient of Determination: 0.5309163687431881 RMSE: 0.34573888294640764 NRMSE: 0.08343723796278872 MAPE: 76.35374741204211 Pearson Correlation: 0.8207755405473405 Spearman Correlation: 0.7186348956969539 Coefficient of Determination: 0.4791355027940266 RMSE: 0.32627920397776633 NRMSE: 0.1331425789511819 MAPE: 111.37102798468858 Predictor: ElasticNet Pearson Correlation: 0.7277810800796218 Spearman Correlation: 0.6886166966479792 Coefficient of Determination: 0.5257446979542122 RMSE: 0.34763955290741233 NRMSE: 0.0838959270476657 MAPE: 78.7903153234862 Pearson Correlation: 0.8052517426358445 Spearman Correlation: 0.6798663324979115 Coefficient of Determination: 0.4486545397455257 RMSE: 0.335690396770189 NRMSE: 0.13698294163477887 MAPE: 114.8055584805137 Predictor: RandomForests Pearson Correlation: 0.8558321664550124 Spearman Correlation: 0.7158803290459447 Coefficient of Determination: 0.7289157895599063 RMSE: 0.2628301582132483 NRMSE: 0.06342885783556924 MAPE: 55.54281814763038 Pearson Correlation: 0.8454418160475344 Spearman Correlation: 0.7088136995510649 Coefficient of Determination: 0.7021847735901194 RMSE: 0.24671778934110478 NRMSE: 0.10067648304133878 MAPE: 69.85591672927826 Protein: CCND1 x_train_column_count: 3 x_train columns: ['mRNA_CCND1', 'DNA_CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 0.3746815735269405 Spearman Correlation: 0.35395103891826996 Coefficient of Determination: 0.14038628154062427 RMSE: 0.22280163394164668 NRMSE: 0.14234525110952242 MAPE: 552.1562719009496 Pearson Correlation: 0.5968130666515656 Spearman Correlation: 0.49525056422149905 Coefficient of Determination: 0.27566345573841233 RMSE: 0.19489881178488835 NRMSE: 0.12291801954142809 MAPE: 457.1019648423455 Predictor: ElasticNet Pearson Correlation: 0.37214423072712155 Spearman Correlation: 0.35082975098165403 Coefficient of Determination: 0.13454704615698754 RMSE: 0.2235570833174219 NRMSE: 0.1428278985174109 MAPE: 565.6326165720184 Pearson Correlation: 0.5974837792292799 Spearman Correlation: 0.49542512998915206 Coefficient of Determination: 0.2423236984571987 RMSE: 0.19933375357260288 NRMSE: 0.1257150312642551 MAPE: 462.5639202459974 Predictor: RandomForests Pearson Correlation: 0.46197344313750055 Spearman Correlation: 0.42009485046560946 Coefficient of Determination: 0.20718233025160238 RMSE: 0.2139702346841979 NRMSE: 0.1367029776543859 MAPE: 501.3862819496525 Pearson Correlation: 0.5239063128183332 Spearman Correlation: 0.4903835937185394 Coefficient of Determination: 0.2548449058810903 RMSE: 0.19767981702468962 NRMSE: 0.12467193303777095 MAPE: 429.79472373158495 Protein: ERBB2 x_train_column_count: 3 x_train columns: ['mRNA_ERBB2', 'DNA_ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 0.833835133229307 Spearman Correlation: 0.5917403153684603 Coefficient of Determination: 0.6952810294075359 RMSE: 0.5414286843969051 NRMSE: 0.09224128735657786 MAPE: 229.55056699637498 Pearson Correlation: 0.7958879450413264 Spearman Correlation: 0.6696725266810611 Coefficient of Determination: 0.5896100986948778 RMSE: 0.664105696020204 NRMSE: 0.11958542442831491 MAPE: 216.70937790962932 Predictor: ElasticNet Pearson Correlation: 0.8335748443377513 Spearman Correlation: 0.5946004429171255 Coefficient of Determination: 0.692044388940035 RMSE: 0.5442965418430367 NRMSE: 0.09272987407244607 MAPE: 236.4811423054027 Pearson Correlation: 0.7977476887176207 Spearman Correlation: 0.6714730501296385 Coefficient of Determination: 0.5952790754943896 RMSE: 0.659502888122266 NRMSE: 0.11875659742180754 MAPE: 197.4438555698542 Predictor: RandomForests Pearson Correlation: 0.8439210356643981 Spearman Correlation: 0.6436216896458752 Coefficient of Determination: 0.7111645777246667 RMSE: 0.527128795328093 NRMSE: 0.08980506590253215 MAPE: 395.669453502908 Pearson Correlation: 0.7806416834657331 Spearman Correlation: 0.6801675696846675 Coefficient of Determination: 0.5587921881259992 RMSE: 0.6885896159593243 NRMSE: 0.12399424063804594 MAPE: 220.33738001385248 Protein: ERBB3 x_train_column_count: 3 x_train columns: ['mRNA_ERBB3', 'DNA_ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.4273839429487755 Spearman Correlation: 0.47243121817648176 Coefficient of Determination: 0.18265703469044192 RMSE: 0.4318886680585523 NRMSE: 0.11809303537922622 MAPE: 214.3411672963176 Pearson Correlation: 0.32019154370309544 Spearman Correlation: 0.31849524308283145 Coefficient of Determination: 0.05279457877557281 RMSE: 0.37429127765486264 NRMSE: 0.18422838239225003 MAPE: 195.61978231048172 Predictor: ElasticNet Pearson Correlation: 0.42468960001967315 Spearman Correlation: 0.4753673282675483 Coefficient of Determination: 0.1774533017395593 RMSE: 0.43326132774833653 NRMSE: 0.11846836717489016 MAPE: 209.3618187533065 Pearson Correlation: 0.32098233711448554 Spearman Correlation: 0.3205451439544134 Coefficient of Determination: 0.07876467891432204 RMSE: 0.3691245321577732 NRMSE: 0.18168527967522932 MAPE: 186.31165993304646 Predictor: RandomForests Pearson Correlation: 0.5043441554778042 Spearman Correlation: 0.4967294406055903 Coefficient of Determination: 0.25250416209075544 RMSE: 0.41302280706045774 NRMSE: 0.11293446800971722 MAPE: 238.26994421623908 Pearson Correlation: 0.41023091082039265 Spearman Correlation: 0.31973825672312317 Coefficient of Determination: 0.14497401979680946 RMSE: 0.3556127098990614 NRMSE: 0.17503468077938908 MAPE: 237.48071851111553 Fold: 5 Protein: RB1 x_train_column_count: 3 x_train columns: ['mRNA_RB1', 'DNA_RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.2190586623358844 Spearman Correlation: 0.2755894037576364 Coefficient of Determination: 0.047986697544387114 RMSE: 0.22822390508529145 NRMSE: 0.11274603433665711 MAPE: 185.85319064617295 Pearson Correlation: 0.18067146500968398 Spearman Correlation: 0.28927293357772543 Coefficient of Determination: -0.07080953626950404 RMSE: 0.24873419869260022 NRMSE: 0.12541304413438084 MAPE: 436.7325323189494 Predictor: ElasticNet Pearson Correlation: 0.21433344039713825 Spearman Correlation: 0.276131837734178 Coefficient of Determination: 0.042592879776898296 RMSE: 0.2288695155288387 NRMSE: 0.11306497558520458 MAPE: 158.56699001538627 Pearson Correlation: 0.19871442511292395 Spearman Correlation: 0.30096884001047397 Coefficient of Determination: -0.0681197533151836 RMSE: 0.24842160263455346 NRMSE: 0.1252554316169622 MAPE: 331.2059029787677 Predictor: RandomForests Pearson Correlation: 0.33854494118637524 Spearman Correlation: 0.37621701657760676 Coefficient of Determination: 0.10262732390434892 RMSE: 0.22157769724300938 NRMSE: 0.10946270791511309 MAPE: 198.84977567989839 Pearson Correlation: 0.15593555926730795 Spearman Correlation: 0.25177008749362567 Coefficient of Determination: -0.08603118311948155 RMSE: 0.2504958489706899 NRMSE: 0.12630127713666472 MAPE: 581.5901711938733 Protein: CDH1 x_train_column_count: 3 x_train columns: ['mRNA_CDH1', 'DNA_CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.6735195578640034 Spearman Correlation: 0.5938956565556813 Coefficient of Determination: 0.4536285948253226 RMSE: 0.8323585519880814 NRMSE: 0.13253694977677166 MAPE: 248.22327816558683 Pearson Correlation: 0.49132555686405094 Spearman Correlation: 0.5288021047643986 Coefficient of Determination: 0.22622289721992173 RMSE: 1.0219268011867955 NRMSE: 0.20096493700945814 MAPE: 1041.2465023464456 Predictor: ElasticNet Pearson Correlation: 0.6485390810490554 Spearman Correlation: 0.5926957361907532 Coefficient of Determination: 0.40450697311084505 RMSE: 0.8689700437245128 NRMSE: 0.13836661949054374 MAPE: 270.42492945038117 Pearson Correlation: 0.5045681319502027 Spearman Correlation: 0.5417748350976944 Coefficient of Determination: 0.24582343024122377 RMSE: 1.0089005761523693 NRMSE: 0.1984032912140114 MAPE: 1350.578340577969 Predictor: RandomForests Pearson Correlation: 0.7548503742726914 Spearman Correlation: 0.613898079291312 Coefficient of Determination: 0.5687672938568806 RMSE: 0.7394729819680758 NRMSE: 0.11774672493998212 MAPE: 166.30422911456878 Pearson Correlation: 0.625082550254143 Spearman Correlation: 0.5457639444172435 Coefficient of Determination: 0.3788042778798629 RMSE: 0.9156427904638805 NRMSE: 0.18006387100821628 MAPE: 646.6200881021399 Protein: CDH2 x_train_column_count: 3 x_train columns: ['mRNA_CDH2', 'DNA_CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.1391207231739138 Spearman Correlation: 0.08279227359449186 Coefficient of Determination: 0.019354575616432723 RMSE: 0.3556439590286937 NRMSE: 0.17466920044629128 MAPE: 197.8738969519393 Pearson Correlation: 0.15929976903227117 Spearman Correlation: -0.11654773319842625 Coefficient of Determination: 0.007222907307674942 RMSE: 0.4155825371916907 NRMSE: 0.15540733960013114 MAPE: 239.39614145628778 Predictor: ElasticNet Pearson Correlation: 0.13776475523400486 Spearman Correlation: 0.07886292148061753 Coefficient of Determination: 0.016572710910836785 RMSE: 0.3561480416993742 NRMSE: 0.1749167730953166 MAPE: 213.01924247460425 Pearson Correlation: 0.1537883558217415 Spearman Correlation: -0.1015076266632875 Coefficient of Determination: 0.010891144896671756 RMSE: 0.4148140533645954 NRMSE: 0.15511996461103356 MAPE: 354.29572101398924 Predictor: RandomForests Pearson Correlation: 0.24032982333582778 Spearman Correlation: 0.2777107861496936 Coefficient of Determination: 0.05133725697787539 RMSE: 0.3497964160170084 NRMSE: 0.171797267333141 MAPE: 655.7081412737822 Pearson Correlation: 0.07942734585840486 Spearman Correlation: 0.02240025938513883 Coefficient of Determination: -0.010870154878050986 RMSE: 0.41935237173052403 NRMSE: 0.15681707149207189 MAPE: 214.59612447119008 Protein: CDH3 x_train_column_count: 3 x_train columns: ['mRNA_CDH3', 'DNA_CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.29263580539856854 Spearman Correlation: 0.335571981284833 Coefficient of Determination: 0.08563571460126884 RMSE: 0.19484764483185588 NRMSE: 0.13670065445351062 MAPE: 335.26063596947563 Pearson Correlation: 0.26293066078536864 Spearman Correlation: 0.2790932555268769 Coefficient of Determination: 0.06488826484608523 RMSE: 0.21602282814515378 NRMSE: 0.1948978501656942 MAPE: 120.89078538044362 Predictor: ElasticNet Pearson Correlation: 0.29178748843444485 Spearman Correlation: 0.33919459110320027 Coefficient of Determination: 0.08034290409200084 RMSE: 0.1954107702573605 NRMSE: 0.1370957303820512 MAPE: 272.6041169398606 Pearson Correlation: 0.264818448342871 Spearman Correlation: 0.2969638025411789 Coefficient of Determination: 0.06119505873760245 RMSE: 0.2164489968101649 NRMSE: 0.1952823435885969 MAPE: 110.92357216209501 Predictor: RandomForests Pearson Correlation: 0.3776872078851734 Spearman Correlation: 0.3815503379975473 Coefficient of Determination: 0.14023788033182383 RMSE: 0.1889403375197448 NRMSE: 0.13255622265234382 MAPE: 416.20265033086054 Pearson Correlation: 0.3244157962221784 Spearman Correlation: 0.2757464799041295 Coefficient of Determination: 0.10172575946716611 RMSE: 0.21172510981542375 NRMSE: 0.19102040781261448 MAPE: 149.50857736682568 Protein: PTEN x_train_column_count: 3 x_train columns: ['mRNA_PTEN', 'DNA_PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 0.41588962419341313 Spearman Correlation: 0.43246741302263064 Coefficient of Determination: 0.1729641795117386 RMSE: 0.5174822683472706 NRMSE: 0.08091349673165048 MAPE: 288.94925329695644 Pearson Correlation: 0.4225473497784461 Spearman Correlation: 0.44997319168568184 Coefficient of Determination: 0.17124904565837984 RMSE: 0.6570092082021319 NRMSE: 0.12709091771164732 MAPE: 265.6228832983164 Predictor: ElasticNet Pearson Correlation: 0.40399846246111054 Spearman Correlation: 0.4309389806471902 Coefficient of Determination: 0.1603266096530751 RMSE: 0.5214209881631834 NRMSE: 0.08152935472804056 MAPE: 265.3632690546618 Pearson Correlation: 0.4286691258309068 Spearman Correlation: 0.44859162832454275 Coefficient of Determination: 0.16994693671543537 RMSE: 0.6575251423266925 NRMSE: 0.12719071926777556 MAPE: 249.01901461996258 Predictor: RandomForests Pearson Correlation: 0.4672345651100567 Spearman Correlation: 0.4591334522927066 Coefficient of Determination: 0.2103267758920705 RMSE: 0.5056581592201916 NRMSE: 0.07906467973109087 MAPE: 344.4200544482602 Pearson Correlation: 0.4180885945666071 Spearman Correlation: 0.4547197211225426 Coefficient of Determination: 0.16339310478244984 RMSE: 0.6601158420369176 NRMSE: 0.127691860499249 MAPE: 357.9294599645899 Protein: BRCA2 x_train_column_count: 3 x_train columns: ['mRNA_BRCA2', 'DNA_BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.042607259179672514 Spearman Correlation: 0.04294992568599749 Coefficient of Determination: 0.0018153785348037355 RMSE: 0.20028615534952582 NRMSE: 0.12902957342536694 MAPE: 117.56895811139233 Pearson Correlation: -0.05060451444076569 Spearman Correlation: -0.031663736455566784 Coefficient of Determination: -0.10789089161261667 RMSE: 0.1748177744395705 NRMSE: 0.22862456606234288 MAPE: 113.54419564266125 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: RandomForests Pearson Correlation: 0.31970454136510207 Spearman Correlation: 0.2408103464331665 Coefficient of Determination: 0.054202580617301876 RMSE: 0.19495956853831028 NRMSE: 0.1255980470531875 MAPE: 135.64011901361627 Pearson Correlation: 0.021699458617916098 Spearman Correlation: -0.027011423328607127 Coefficient of Determination: -0.11119317430321729 RMSE: 0.17507811964505246 NRMSE: 0.22896504236585685 MAPE: 120.24225628546093 Protein: CDKN2A x_train_column_count: 3 x_train columns: ['mRNA_CDKN2A', 'DNA_CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 0.5663381500090143 Spearman Correlation: 0.4953005174006369 Coefficient of Determination: 0.32073890015563267 RMSE: 0.5601800434543106 NRMSE: 0.14264471071638377 MAPE: 145.65070746342573 Pearson Correlation: 0.31482309890468774 Spearman Correlation: 0.3271038292248033 Coefficient of Determination: -0.015529015772245192 RMSE: 0.6106362533402362 NRMSE: 0.1536539728089973 MAPE: 285.09936453064716 Predictor: ElasticNet Pearson Correlation: 0.5660332861427247 Spearman Correlation: 0.4856960684402333 Coefficient of Determination: 0.31709483788631343 RMSE: 0.5616806449721579 NRMSE: 0.14302682513105291 MAPE: 159.93162104915476 Pearson Correlation: 0.317415740604606 Spearman Correlation: 0.3309093629596379 Coefficient of Determination: 0.031183833762464253 RMSE: 0.5964267382159368 NRMSE: 0.15007844246897079 MAPE: 243.16984613094914 Predictor: RandomForests Pearson Correlation: 0.6814633627661284 Spearman Correlation: 0.5582440271028338 Coefficient of Determination: 0.4638574879258852 RMSE: 0.49767907755264007 NRMSE: 0.1267294129389728 MAPE: 263.893146083864 Pearson Correlation: 0.37613355440235063 Spearman Correlation: 0.3125182383039447 Coefficient of Determination: -0.05482359828038019 RMSE: 0.6223380216816197 NRMSE: 0.1565984805821745 MAPE: 486.48465458979456 Protein: TP53 x_train_column_count: 3 x_train columns: ['mRNA_TP53', 'DNA_TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.5104700586699071 Spearman Correlation: 0.4320690064792694 Coefficient of Determination: 0.2605796807984586 RMSE: 0.3644176491006784 NRMSE: 0.09268232892511978 MAPE: 770.8957367155472 Pearson Correlation: 0.5225931726361469 Spearman Correlation: 0.4473197920173569 Coefficient of Determination: 0.2509176250319346 RMSE: 0.4571077789802278 NRMSE: 0.12243411784658573 MAPE: 195.9696323482568 Predictor: ElasticNet Pearson Correlation: 0.5047548058717419 Spearman Correlation: 0.4177591219397205 Coefficient of Determination: 0.23851755691985532 RMSE: 0.3698142647055679 NRMSE: 0.09405484999760114 MAPE: 661.908194053667 Pearson Correlation: 0.5144629213349535 Spearman Correlation: 0.4318732153767504 Coefficient of Determination: 0.21225047355336568 RMSE: 0.46875714243000244 NRMSE: 0.12555434376054705 MAPE: 172.0415619594339 Predictor: RandomForests Pearson Correlation: 0.5602481481612476 Spearman Correlation: 0.49450872224317843 Coefficient of Determination: 0.3035120007232104 RMSE: 0.3536800233902058 NRMSE: 0.08995142892499958 MAPE: 742.620220819138 Pearson Correlation: 0.548057323604883 Spearman Correlation: 0.43321619764195557 Coefficient of Determination: 0.2707383016775887 RMSE: 0.45101971373300986 NRMSE: 0.12080345888121331 MAPE: 191.29685249447965 Protein: CTNNB1 x_train_column_count: 3 x_train columns: ['mRNA_CTNNB1', 'DNA_CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.06017628696069412 Spearman Correlation: 0.09588678934493636 Coefficient of Determination: 0.0036211855123756687 RMSE: 0.7546107795334123 NRMSE: 0.14842855616314168 MAPE: 672.4011431137344 Pearson Correlation: 0.18479039626231866 Spearman Correlation: 0.19979550867217796 Coefficient of Determination: 0.019970024413197285 RMSE: 0.670857187774057 NRMSE: 0.21485374593630424 MAPE: 275.9727827085837 Predictor: ElasticNet Pearson Correlation: 0.0573481470454742 Spearman Correlation: 0.0955019070246612 Coefficient of Determination: 0.0028359616871885818 RMSE: 0.7549080668997452 NRMSE: 0.14848703125486729 MAPE: 686.220826069305 Pearson Correlation: 0.18056904093368192 Spearman Correlation: 0.21622464120500254 Coefficient of Determination: 0.01270648758491233 RMSE: 0.6733386427183625 NRMSE: 0.21564847527642686 MAPE: 272.62623652402976 Predictor: RandomForests Pearson Correlation: 0.3570069427734524 Spearman Correlation: 0.31803771508088474 Coefficient of Determination: 0.06477007630297538 RMSE: 0.7310885116211374 NRMSE: 0.1438018315541183 MAPE: 713.117856559522 Pearson Correlation: 0.2185397506203565 Spearman Correlation: 0.2246972727217091 Coefficient of Determination: 0.03297179015477392 RMSE: 0.6663922985081792 NRMSE: 0.21342378706957782 MAPE: 269.1156382812608 Protein: CCNE1 x_train_column_count: 3 x_train columns: ['mRNA_CCNE1', 'DNA_CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.7402320361625658 Spearman Correlation: 0.6962274058400395 Coefficient of Determination: 0.5479434673613781 RMSE: 0.30174670538378123 NRMSE: 0.10747879087579028 MAPE: 67.5117787557831 Pearson Correlation: 0.7813352619397866 Spearman Correlation: 0.7154378483522239 Coefficient of Determination: 0.20727363047731706 RMSE: 0.577033546398427 NRMSE: 0.13925562815802953 MAPE: 90.85381339003568 Predictor: ElasticNet Pearson Correlation: 0.7336538535850147 Spearman Correlation: 0.7019672344897712 Coefficient of Determination: 0.5186496297577725 RMSE: 0.3113700362739679 NRMSE: 0.11090651336561635 MAPE: 75.90013601001598 Pearson Correlation: 0.7812055916945018 Spearman Correlation: 0.7105150937044102 Coefficient of Determination: 0.5207652254716062 RMSE: 0.4486560945330371 NRMSE: 0.1082742704667416 MAPE: 94.61358888675069 Predictor: RandomForests Pearson Correlation: 0.8555901031193875 Spearman Correlation: 0.7115030650421984 Coefficient of Determination: 0.7305818210907354 RMSE: 0.23294833479894259 NRMSE: 0.08297358318751294 MAPE: 56.52821427527183 Pearson Correlation: 0.7984648767099046 Spearman Correlation: 0.7309889859775095 Coefficient of Determination: 0.6102477638034867 RMSE: 0.40460730300332876 NRMSE: 0.09764396626283968 MAPE: 78.44368259757474 Protein: CCND1 x_train_column_count: 3 x_train columns: ['mRNA_CCND1', 'DNA_CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.42649023127035873 Spearman Correlation: 0.4082172466956049 Coefficient of Determination: 0.18189391736904403 RMSE: 0.2058793936818677 NRMSE: 0.1296731039515946 MAPE: 597.3773050657828 Pearson Correlation: 0.35668852865577205 Spearman Correlation: 0.26432997917679774 Coefficient of Determination: 0.12597206418327112 RMSE: 0.25799253018654944 NRMSE: 0.1648282862387073 MAPE: 243.54708460171088 Predictor: ElasticNet Pearson Correlation: 0.4238928052527589 Spearman Correlation: 0.4025793702702949 Coefficient of Determination: 0.17472857315074386 RMSE: 0.2067790207059945 NRMSE: 0.13023973389221663 MAPE: 614.060439895503 Pearson Correlation: 0.35643659228606317 Spearman Correlation: 0.26238980535916906 Coefficient of Determination: 0.12052636796512362 RMSE: 0.2587950030079358 NRMSE: 0.16534097635344283 MAPE: 247.89568227736035 Predictor: RandomForests Pearson Correlation: 0.49268066932663374 Spearman Correlation: 0.44978518155098807 Coefficient of Determination: 0.23905745780751642 RMSE: 0.19855645127304497 NRMSE: 0.1250607498192614 MAPE: 545.558550562691 Pearson Correlation: 0.3912694969552766 Spearman Correlation: 0.3008115144081272 Coefficient of Determination: 0.15006617485900264 RMSE: 0.25441167161808803 NRMSE: 0.16254051929957963 MAPE: 251.77277359936053 Protein: ERBB2 x_train_column_count: 3 x_train columns: ['mRNA_ERBB2', 'DNA_ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.8292610082637567 Spearman Correlation: 0.6311411442698738 Coefficient of Determination: 0.6876738198266225 RMSE: 0.5744651033365087 NRMSE: 0.0978695850446375 MAPE: 257.5384239312276 Pearson Correlation: 0.7904280538861863 Spearman Correlation: 0.5733662514495194 Coefficient of Determination: 0.6210022786475173 RMSE: 0.5341928207154008 NRMSE: 0.11819732729624975 MAPE: 299.522722075497 Predictor: ElasticNet Pearson Correlation: 0.8290371758277334 Spearman Correlation: 0.6313999929411919 Coefficient of Determination: 0.6852077369168805 RMSE: 0.5767285912803779 NRMSE: 0.0982552074689299 MAPE: 265.2841056042151 Pearson Correlation: 0.7899188916649363 Spearman Correlation: 0.575480991034801 Coefficient of Determination: 0.6143917521802829 RMSE: 0.5388314109994637 NRMSE: 0.11922367761908702 MAPE: 298.47250582530546 Predictor: RandomForests Pearson Correlation: 0.8422875254197999 Spearman Correlation: 0.6641902978837151 Coefficient of Determination: 0.707966488581793 RMSE: 0.5554894337190149 NRMSE: 0.0946367674189507 MAPE: 525.5259546001823 Pearson Correlation: 0.7770231374392905 Spearman Correlation: 0.6032940377474442 Coefficient of Determination: 0.5990953212604824 RMSE: 0.5494147440549729 NRMSE: 0.12156538202344794 MAPE: 247.3352776119546 Protein: ERBB3 x_train_column_count: 3 x_train columns: ['mRNA_ERBB3', 'DNA_ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.3815490801746107 Spearman Correlation: 0.4097841038722461 Coefficient of Determination: 0.14557970058209146 RMSE: 0.43343648776968763 NRMSE: 0.1169720677187206 MAPE: 211.9632382914037 Pearson Correlation: 0.5134907213506094 Spearman Correlation: 0.5530268457212684 Coefficient of Determination: 0.22428240688006984 RMSE: 0.36724514020591714 NRMSE: 0.17768435883083217 MAPE: 191.81520589969222 Predictor: ElasticNet Pearson Correlation: 0.3786463693291676 Spearman Correlation: 0.41472342132193446 Coefficient of Determination: 0.14117827894096813 RMSE: 0.4345514461744984 NRMSE: 0.11727296299106413 MAPE: 211.95214591624782 Pearson Correlation: 0.5101230249583956 Spearman Correlation: 0.5443783588324045 Coefficient of Determination: 0.20213537944248827 RMSE: 0.37245073929628647 NRMSE: 0.18020298586067934 MAPE: 193.89062315342815 Predictor: RandomForests Pearson Correlation: 0.46486685418215473 Spearman Correlation: 0.437387903066299 Coefficient of Determination: 0.21474829969107045 RMSE: 0.41552210494535907 NRMSE: 0.11213748996628203 MAPE: 251.59688507859425 Pearson Correlation: 0.5424618846414083 Spearman Correlation: 0.5501866300948342 Coefficient of Determination: 0.26533840065127934 RMSE: 0.35739453453943376 NRMSE: 0.17291833646505475 MAPE: 217.8774055862619
Min-Max
scenario = Scenario.selfmRNA_CNA_Mutations
normalizeTechnique = NormalizeTechnique.MinMax
X, Y, Z = get_mRNA_DNA_data(normalizeTechnique)
X.head()
| mRNA_RB1 | DNA_RB1 | mRNA_CDH1 | DNA_CDH1 | mRNA_PTEN | DNA_PTEN | mRNA_BRCA2 | DNA_BRCA2 | mRNA_CDKN2A | DNA_CDKN2A | ... | mRNA_CCND1 | DNA_CCND1 | mRNA_CDH2 | DNA_CDH2 | mRNA_CDH3 | DNA_CDH3 | mRNA_ERBB2 | DNA_ERBB2 | mRNA_ERBB3 | DNA_ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.232188 | 0.571429 | 0.241819 | 0.303489 | 0.290862 | 0.572826 | 0.071908 | 0.351590 | 0.018993 | 0.203320 | ... | 0.014719 | 0.183055 | 0.001527 | 0.241286 | 0.068768 | 0.303489 | 0.022728 | 0.194079 | 0.503176 | 0.299033 |
| TCGA-A1-A0SH-01 | 0.252392 | 0.549284 | 0.143802 | 0.274852 | 0.353551 | 0.456165 | 0.069271 | 0.337964 | 0.044777 | 0.279755 | ... | 0.020905 | 0.189298 | 0.020815 | 0.242531 | 0.056300 | 0.274852 | 0.052390 | 0.300000 | 0.274617 | 0.214178 |
| TCGA-A1-A0SJ-01 | 0.394079 | 0.474598 | 0.913037 | 0.569124 | 0.249168 | 0.275236 | 0.174246 | 0.440289 | 0.020176 | 0.170561 | ... | 0.101310 | 0.382386 | 0.007443 | 0.328423 | 0.052447 | 0.569124 | 0.026689 | 0.265570 | 0.289823 | 0.137701 |
| TCGA-A1-A0SK-01 | 0.005262 | 0.000000 | 0.039499 | 0.176432 | 0.127404 | 0.451973 | 0.662632 | 0.616618 | 0.127820 | 0.313169 | ... | 0.000355 | 0.210479 | 0.080472 | 0.274896 | 0.043657 | 0.176432 | 0.000000 | 0.137939 | 0.098413 | 0.229216 |
| TCGA-A1-A0SQ-01 | 0.243405 | 0.254451 | 0.465456 | 0.415405 | 0.313780 | 0.449179 | 0.062846 | 0.156559 | 0.020077 | 0.280411 | ... | 0.344902 | 1.000000 | 0.293017 | 0.242116 | 0.015709 | 0.415405 | 0.015644 | 0.185088 | 0.570974 | 0.212889 |
5 rows × 26 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 3 x_train columns: ['mRNA_RB1', 'DNA_RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.20326920373261573 Spearman Correlation: 0.27022625031888176 Coefficient of Determination: 0.041318369186091775 RMSE: 0.21942333176816547 NRMSE: 0.08309915991977483 MAPE: 175.04108593233522 Pearson Correlation: 0.2857480879246556 Spearman Correlation: 0.3606135986733002 Coefficient of Determination: 0.02542479532111619 RMSE: 0.2768778973741517 NRMSE: 0.13678183673503094 MAPE: 108.76525992317987 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: RandomForests Pearson Correlation: 0.3348632844312251 Spearman Correlation: 0.38585405470482725 Coefficient of Determination: 0.09767190570412809 RMSE: 0.21287655919723106 NRMSE: 0.08061979140209469 MAPE: 146.79212264798662 Pearson Correlation: 0.2868087245589065 Spearman Correlation: 0.28979434635880885 Coefficient of Determination: 0.03049435099061537 RMSE: 0.2761568252350111 NRMSE: 0.13642561627631794 MAPE: 107.45162156315156 Protein: CDH1 x_train_column_count: 3 x_train columns: ['mRNA_CDH1', 'DNA_CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 0.6326631043068567 Spearman Correlation: 0.5680069879672683 Coefficient of Determination: 0.40026260355118826 RMSE: 0.8738879812349621 NRMSE: 0.14688921070293348 MAPE: 487.7812518158747 Pearson Correlation: 0.6607881864892997 Spearman Correlation: 0.6431567651936396 Coefficient of Determination: 0.4336632177510208 RMSE: 0.8731918333158549 NRMSE: 0.1414259067273258 MAPE: 291.64974724245127 Predictor: ElasticNet Pearson Correlation: 0.5829616977233301 Spearman Correlation: 0.5479037958015781 Coefficient of Determination: 0.25176501216841163 RMSE: 0.9760997634632042 NRMSE: 0.16406968272959913 MAPE: 395.34268085127667 Pearson Correlation: 0.645849152515704 Spearman Correlation: 0.6389864403472834 Coefficient of Determination: 0.29561873073810985 RMSE: 0.973814372861746 NRMSE: 0.15772316621776847 MAPE: 233.5045564593874 Predictor: RandomForests Pearson Correlation: 0.7213244570400039 Spearman Correlation: 0.5942373412705858 Coefficient of Determination: 0.5194569362550763 RMSE: 0.7822424099770637 NRMSE: 0.13148478139899883 MAPE: 300.2007646708796 Pearson Correlation: 0.7465998349399987 Spearman Correlation: 0.6562231643594731 Coefficient of Determination: 0.5540542904091961 RMSE: 0.7748422182042797 NRMSE: 0.12549677985881244 MAPE: 150.95901062986337 Protein: CDH2 x_train_column_count: 3 x_train columns: ['mRNA_CDH2', 'DNA_CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.16137180773813015 Spearman Correlation: 0.027332008895292137 Coefficient of Determination: 0.026040860332672167 RMSE: 0.3663294699731344 NRMSE: 0.13533323357720706 MAPE: 299.13991317706063 Pearson Correlation: 0.04697464071038725 Spearman Correlation: 0.09022534386889086 Coefficient of Determination: -0.0002842825448872155 RMSE: 0.3751683058926436 NRMSE: 0.193615268562029 MAPE: 106.76505249316418 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: RandomForests Pearson Correlation: 0.26964138016702527 Spearman Correlation: 0.2051651401310723 Coefficient of Determination: 0.06625247938190704 RMSE: 0.358687481531217 NRMSE: 0.13251005091903822 MAPE: 443.56812591659616 Pearson Correlation: -0.05647235273688993 Spearman Correlation: -0.0535737574162081 Coefficient of Determination: -0.08422416489625695 RMSE: 0.39059255499800866 NRMSE: 0.20157534964029966 MAPE: 103.75200938313249 Protein: CDH3 x_train_column_count: 3 x_train columns: ['mRNA_CDH3', 'DNA_CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.24860196093067563 Spearman Correlation: 0.3066728575457907 Coefficient of Determination: 0.06180293497857714 RMSE: 0.20224465673949088 NRMSE: 0.14189022895232845 MAPE: 291.8153117606787 Pearson Correlation: 0.42033229281364304 Spearman Correlation: 0.4547702663154814 Coefficient of Determination: 0.16065258119904446 RMSE: 0.1874272020959975 NRMSE: 0.14345638540539107 MAPE: 198.92792755838983 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: RandomForests Pearson Correlation: 0.3547624168172229 Spearman Correlation: 0.3369248853188327 Coefficient of Determination: 0.12255321521867268 RMSE: 0.1955871934699409 NRMSE: 0.13721950487591972 MAPE: 380.73785707478424 Pearson Correlation: 0.43973084451451977 Spearman Correlation: 0.42425255072794343 Coefficient of Determination: 0.17323139443888846 RMSE: 0.1860174690266897 NRMSE: 0.1423773786857274 MAPE: 336.9452681438514 Protein: PTEN x_train_column_count: 3 x_train columns: ['mRNA_PTEN', 'DNA_PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 0.428851442797307 Spearman Correlation: 0.4454106128203037 Coefficient of Determination: 0.1839135599893318 RMSE: 0.5659410783727593 NRMSE: 0.08849051338796955 MAPE: 339.93104587565057 Pearson Correlation: 0.34678748200463677 Spearman Correlation: 0.39748804994634673 Coefficient of Determination: 0.0987797182291762 RMSE: 0.4714983816344476 NRMSE: 0.15539462844718463 MAPE: 168.93293793562773 Predictor: ElasticNet Pearson Correlation: 0.3840029914231387 Spearman Correlation: 0.4482285515373434 Coefficient of Determination: 0.041199616056338595 RMSE: 0.6134331431552703 NRMSE: 0.09591636981553753 MAPE: 333.1694520594424 Pearson Correlation: 0.23765431022083924 Spearman Correlation: 0.38777192469027416 Coefficient of Determination: 0.018904059340505763 RMSE: 0.49194943641763667 NRMSE: 0.16213480865389118 MAPE: 161.71331937297182 Predictor: RandomForests Pearson Correlation: 0.4675690582172748 Spearman Correlation: 0.4757284062189877 Coefficient of Determination: 0.21164568809492623 RMSE: 0.5562421061560197 NRMSE: 0.08697398266844182 MAPE: 403.39167522660387 Pearson Correlation: 0.3844380312189888 Spearman Correlation: 0.3978438785411829 Coefficient of Determination: 0.13856104935750702 RMSE: 0.4609745832863918 NRMSE: 0.1519262353458545 MAPE: 189.97346503413263 Protein: BRCA2 x_train_column_count: 3 x_train columns: ['mRNA_BRCA2', 'DNA_BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.032629391273553444 Spearman Correlation: 0.0006863514914322238 Coefficient of Determination: 0.0010646771748825667 RMSE: 0.19750600275601585 NRMSE: 0.12776448239557 MAPE: 120.4199457443768 Pearson Correlation: -0.07897401064425709 Spearman Correlation: -0.04044488396852578 Coefficient of Determination: -0.012446345698319261 RMSE: 0.18588074751809686 NRMSE: 0.1860295711750369 MAPE: 104.18226869116702 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: RandomForests Pearson Correlation: 0.35245522468721424 Spearman Correlation: 0.2993502555469365 Coefficient of Determination: 0.06183469398171437 RMSE: 0.19140412743196722 NRMSE: 0.12381724569622554 MAPE: 109.76861267945004 Pearson Correlation: 0.014645645036438056 Spearman Correlation: 0.04242364383283092 Coefficient of Determination: -0.006752627486372731 RMSE: 0.18535733965001716 NRMSE: 0.18550574424541352 MAPE: 109.72221575354264 Protein: CDKN2A x_train_column_count: 3 x_train columns: ['mRNA_CDKN2A', 'DNA_CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 0.48942788112969765 Spearman Correlation: 0.42242544253713993 Coefficient of Determination: 0.2395396508271055 RMSE: 0.5604753869810942 NRMSE: 0.12670405492960193 MAPE: 162.737291117048 Pearson Correlation: 0.5966058458325866 Spearman Correlation: 0.5205931128670374 Coefficient of Determination: 0.3539384198584181 RMSE: 0.6003147429436976 NRMSE: 0.1621157825934911 MAPE: 197.6155854710305 Predictor: ElasticNet Pearson Correlation: 0.4889333301435524 Spearman Correlation: 0.4372573599558185 Coefficient of Determination: 0.02753000686609841 RMSE: 0.6338060244515497 NRMSE: 0.14328156989975122 MAPE: 204.5149724641318 Pearson Correlation: 0.5977347226882639 Spearman Correlation: 0.522636815920398 Coefficient of Determination: 0.029158886467395395 RMSE: 0.7358954732025642 NRMSE: 0.1987295363766039 MAPE: 423.8310359528594 Predictor: RandomForests Pearson Correlation: 0.6041562273678246 Spearman Correlation: 0.5147069169225836 Coefficient of Determination: 0.3644871906789572 RMSE: 0.5123661294404889 NRMSE: 0.11582821960901747 MAPE: 223.19924217348762 Pearson Correlation: 0.6756320582291276 Spearman Correlation: 0.5195553010106929 Coefficient of Determination: 0.4427695893058061 RMSE: 0.5575187226724603 NRMSE: 0.15055866126720505 MAPE: 518.4283627487548 Protein: TP53 x_train_column_count: 3 x_train columns: ['mRNA_TP53', 'DNA_TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.5092263411661889 Spearman Correlation: 0.41848196334947646 Coefficient of Determination: 0.2593114665375037 RMSE: 0.38971130016880456 NRMSE: 0.09365808703888599 MAPE: 696.5034481336378 Pearson Correlation: 0.5069920231554162 Spearman Correlation: 0.4382743147010049 Coefficient of Determination: 0.2505083237794835 RMSE: 0.3641593665394239 NRMSE: 0.13095018394743568 MAPE: 506.3393514815698 Predictor: ElasticNet Pearson Correlation: 0.39909793557962253 Spearman Correlation: 0.3885884406197226 Coefficient of Determination: 0.12535616123398052 RMSE: 0.42348770760810817 NRMSE: 0.10177546445760832 MAPE: 537.1921154489185 Pearson Correlation: 0.5023542925215839 Spearman Correlation: 0.4888401131596918 Coefficient of Determination: 0.18049958760263807 RMSE: 0.38078748480330077 NRMSE: 0.1369295856748897 MAPE: 567.4667962543093 Predictor: RandomForests Pearson Correlation: 0.5575020364366732 Spearman Correlation: 0.4601214101805722 Coefficient of Determination: 0.2999560458893895 RMSE: 0.37886792793286383 NRMSE: 0.09105213360559093 MAPE: 660.8976978045634 Pearson Correlation: 0.5115748976089421 Spearman Correlation: 0.4910781963197371 Coefficient of Determination: 0.25968208191413633 RMSE: 0.3619238543568273 NRMSE: 0.13014630312374673 MAPE: 341.63644096631134 Protein: CTNNB1 x_train_column_count: 3 x_train columns: ['mRNA_CTNNB1', 'DNA_CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 0.09332202022972687 Spearman Correlation: 0.15755303042235122 Coefficient of Determination: 0.008708999459757338 RMSE: 0.7340178555617521 NRMSE: 0.1479367667456219 MAPE: 627.6931224228314 Pearson Correlation: 0.021845495544679926 Spearman Correlation: -0.017788508438201154 Coefficient of Determination: -0.018418053434899218 RMSE: 0.7578418041543133 NRMSE: 0.18802208211043353 MAPE: 283.27296609436735 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: RandomForests Pearson Correlation: 0.34309296408022605 Spearman Correlation: 0.32364019578930675 Coefficient of Determination: 0.08671314141692965 RMSE: 0.7045464762769126 NRMSE: 0.1419969922157552 MAPE: 604.0148832752354 Pearson Correlation: -0.04539183929711445 Spearman Correlation: -0.039027616132749444 Coefficient of Determination: -0.060229416319445894 RMSE: 0.773242005078679 NRMSE: 0.1918429030612512 MAPE: 379.1313698002579 Protein: CCNE1 x_train_column_count: 3 x_train columns: ['mRNA_CCNE1', 'DNA_CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.7228799688694009 Spearman Correlation: 0.7012303297288327 Coefficient of Determination: 0.522555449392626 RMSE: 0.33420401501819114 NRMSE: 0.08065352583878928 MAPE: 92.66847666958556 Pearson Correlation: 0.7574252905876395 Spearman Correlation: 0.6898839137645107 Coefficient of Determination: 0.5203118095417595 RMSE: 0.37195137036806825 NRMSE: 0.1324849048506031 MAPE: 53.05461907939909 Predictor: ElasticNet Pearson Correlation: 0.6299128187435219 Spearman Correlation: 0.42455618567755726 Coefficient of Determination: 0.07050947686675524 RMSE: 0.4663077953981774 NRMSE: 0.11253415918096807 MAPE: 118.39957070631839 Pearson Correlation: 0.5684286150319773 Spearman Correlation: 0.4360306311579359 Coefficient of Determination: 0.061891989573958694 RMSE: 0.5201553527004426 NRMSE: 0.18527350051663136 MAPE: 81.62428512978646 Predictor: RandomForests Pearson Correlation: 0.8583409435301661 Spearman Correlation: 0.7205259681179281 Coefficient of Determination: 0.7312774662682309 RMSE: 0.2507276530885667 NRMSE: 0.06050815770653443 MAPE: 54.067381214004286 Pearson Correlation: 0.8219395862432949 Spearman Correlation: 0.7051977409418355 Coefficient of Determination: 0.6753801857024391 RMSE: 0.30598079049312005 NRMSE: 0.10898692448552806 MAPE: 49.012415037783356 Protein: CCND1 x_train_column_count: 3 x_train columns: ['mRNA_CCND1', 'DNA_CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 0.4047788713220998 Spearman Correlation: 0.3765251379701422 Coefficient of Determination: 0.16384593466879294 RMSE: 0.21844816801096514 NRMSE: 0.13132472136379578 MAPE: 343.5497360598718 Pearson Correlation: 0.4762388818459446 Spearman Correlation: 0.46304750756023805 Coefficient of Determination: 0.10601865621769091 RMSE: 0.22214406935133277 NRMSE: 0.15821325661738134 MAPE: 1127.5581988167357 Predictor: ElasticNet Pearson Correlation: 0.2790804652855324 Spearman Correlation: 0.21867115766019887 Coefficient of Determination: 0.022788594431957243 RMSE: 0.23615629013294498 NRMSE: 0.14197033228706218 MAPE: 399.5508053747819 Pearson Correlation: 0.404323887289031 Spearman Correlation: 0.2626277336889033 Coefficient of Determination: 0.034930108776853874 RMSE: 0.23080747962718678 NRMSE: 0.1643834251803222 MAPE: 1350.4118011861035 Predictor: RandomForests Pearson Correlation: 0.4690056136004898 Spearman Correlation: 0.4039306298985853 Coefficient of Determination: 0.21318648384576055 RMSE: 0.21190497841461634 NRMSE: 0.1273911449992283 MAPE: 314.873635695826 Pearson Correlation: 0.511752113664257 Spearman Correlation: 0.46486934141170444 Coefficient of Determination: 0.26107166697014894 RMSE: 0.201962926432947 NRMSE: 0.14384004218630492 MAPE: 1141.4580559848046 Protein: ERBB2 x_train_column_count: 3 x_train columns: ['mRNA_ERBB2', 'DNA_ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 0.8299714239121487 Spearman Correlation: 0.6256632053976661 Coefficient of Determination: 0.6888525645107596 RMSE: 0.5684806897383324 NRMSE: 0.0968500416952029 MAPE: 291.2746898372921 Pearson Correlation: 0.7921851259713263 Spearman Correlation: 0.5722807530972589 Coefficient of Determination: 0.6197226252124242 RMSE: 0.5593413363496378 NRMSE: 0.10371617584825474 MAPE: 288.31820667795154 Predictor: ElasticNet Pearson Correlation: 0.8209572973205845 Spearman Correlation: 0.6126912637038301 Coefficient of Determination: 0.4599384884196014 RMSE: 0.7489524020302397 NRMSE: 0.12759636813299483 MAPE: 445.5016368558214 Pearson Correlation: 0.7860307732380711 Spearman Correlation: 0.5494634669788313 Coefficient of Determination: 0.4118093743893736 RMSE: 0.6956418820485383 NRMSE: 0.1289897797234449 MAPE: 400.8373886867916 Predictor: RandomForests Pearson Correlation: 0.84260378140247 Spearman Correlation: 0.6511641873981912 Coefficient of Determination: 0.7085731918046572 RMSE: 0.550170568575965 NRMSE: 0.09373061120261088 MAPE: 409.833532108463 Pearson Correlation: 0.800573834774456 Spearman Correlation: 0.6839862179333472 Coefficient of Determination: 0.6316305147340051 RMSE: 0.5505141620332454 NRMSE: 0.10207939218120628 MAPE: 293.3346995341213 Protein: ERBB3 x_train_column_count: 3 x_train columns: ['mRNA_ERBB3', 'DNA_ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.4064762248753169 Spearman Correlation: 0.44252263799339286 Coefficient of Determination: 0.16522292138888917 RMSE: 0.4194967651461704 NRMSE: 0.11321013667528557 MAPE: 201.6235274916139 Pearson Correlation: 0.40805545271033933 Spearman Correlation: 0.45286368752312417 Coefficient of Determination: 0.1632265636637812 RMSE: 0.4258350723995506 NRMSE: 0.17086987689375904 MAPE: 198.80322557353682 Predictor: ElasticNet Pearson Correlation: 0.4002107913871715 Spearman Correlation: 0.4461608353851102 Coefficient of Determination: 0.04383943877554741 RMSE: 0.4489611601225439 NRMSE: 0.12116173120347591 MAPE: 212.3440091888109 Pearson Correlation: 0.4241326159508129 Spearman Correlation: 0.47324952839944506 Coefficient of Determination: 0.041458769712843124 RMSE: 0.45576700800318737 NRMSE: 0.18288031587184905 MAPE: 243.54596984138192 Predictor: RandomForests Pearson Correlation: 0.48996065959677 Spearman Correlation: 0.4663514535695274 Coefficient of Determination: 0.23831379250766205 RMSE: 0.4007111288442711 NRMSE: 0.1081404326156388 MAPE: 241.91682788049184 Pearson Correlation: 0.4307955532871659 Spearman Correlation: 0.47561773636705074 Coefficient of Determination: 0.17680156289238458 RMSE: 0.42236678109616 NRMSE: 0.16947819606131226 MAPE: 271.2299089364279 Fold: 2 Protein: RB1 x_train_column_count: 3 x_train columns: ['mRNA_RB1', 'DNA_RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.25982154799993096 Spearman Correlation: 0.3307634998978648 Coefficient of Determination: 0.06750723680508053 RMSE: 0.2269690375258903 NRMSE: 0.08300506053462928 MAPE: 209.28102304154197 Pearson Correlation: 0.05319026263705211 Spearman Correlation: 0.10110720905277534 Coefficient of Determination: -0.05266995676771269 RMSE: 0.25127082085207364 NRMSE: 0.1439600903232882 MAPE: 277.7602628080221 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: RandomForests Pearson Correlation: 0.3593880562044696 Spearman Correlation: 0.41281497651433136 Coefficient of Determination: 0.11859992967643984 RMSE: 0.22066345886362956 NRMSE: 0.08069904142174868 MAPE: 210.33895035749302 Pearson Correlation: 0.11225072097267615 Spearman Correlation: 0.10809789138175945 Coefficient of Determination: -0.01837941833127621 RMSE: 0.24714438680480813 NRMSE: 0.14159594069324755 MAPE: 297.3746238915008 Protein: CDH1 x_train_column_count: 3 x_train columns: ['mRNA_CDH1', 'DNA_CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.6321421347087326 Spearman Correlation: 0.5495152531665776 Coefficient of Determination: 0.3996036784741134 RMSE: 0.8682975901687989 NRMSE: 0.13929535416199548 MAPE: 415.01678370323816 Pearson Correlation: 0.6470288848328499 Spearman Correlation: 0.697312457321237 Coefficient of Determination: 0.39098114955052476 RMSE: 0.8979398739929576 NRMSE: 0.15946366080500046 MAPE: 262.942264291915 Predictor: ElasticNet Pearson Correlation: 0.5986710591657005 Spearman Correlation: 0.5222626767721071 Coefficient of Determination: 0.25848554406392177 RMSE: 0.9649601871617527 NRMSE: 0.15480230803910366 MAPE: 342.2166270854311 Pearson Correlation: 0.5752497561680046 Spearman Correlation: 0.6594624914642475 Coefficient of Determination: 0.22598299659006693 RMSE: 1.0122951132405344 NRMSE: 0.17977181908018725 MAPE: 184.50200642877786 Predictor: RandomForests Pearson Correlation: 0.7479140980951382 Spearman Correlation: 0.6004232280083732 Coefficient of Determination: 0.557923784523705 RMSE: 0.7450718565027034 NRMSE: 0.11952704844833614 MAPE: 197.8066729333628 Pearson Correlation: 0.6516125561974146 Spearman Correlation: 0.7058225540220889 Coefficient of Determination: 0.38812580542004294 RMSE: 0.9000423780210769 NRMSE: 0.1598370410266519 MAPE: 245.9722700826954 Protein: CDH2 x_train_column_count: 3 x_train columns: ['mRNA_CDH2', 'DNA_CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.14938620447186002 Spearman Correlation: 0.04481920699168721 Coefficient of Determination: 0.022316238086508178 RMSE: 0.3639678275852451 NRMSE: 0.13188195796262234 MAPE: 343.8512107378154 Pearson Correlation: 0.13149888837385415 Spearman Correlation: 0.05064871719832212 Coefficient of Determination: 0.016700069717749066 RMSE: 0.3838346346330534 NRMSE: 0.2022129917937031 MAPE: 121.20230431889179 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: RandomForests Pearson Correlation: 0.23269711502162294 Spearman Correlation: 0.1783552138486899 Coefficient of Determination: 0.046284439956497114 RMSE: 0.35947875554582365 NRMSE: 0.1302553647169446 MAPE: 407.5716373044224 Pearson Correlation: 0.19590961313749478 Spearman Correlation: 0.1023977451092562 Coefficient of Determination: 0.037813287597198486 RMSE: 0.37969146366717804 NRMSE: 0.20003027319322192 MAPE: 125.00119717504997 Protein: CDH3 x_train_column_count: 3 x_train columns: ['mRNA_CDH3', 'DNA_CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.3353915674508605 Spearman Correlation: 0.350065975213623 Coefficient of Determination: 0.11248750351714532 RMSE: 0.19567608833236516 NRMSE: 0.14726550038936814 MAPE: 272.21772308698814 Pearson Correlation: 0.08053707455148888 Spearman Correlation: 0.16048190420446787 Coefficient of Determination: -0.20288164561325783 RMSE: 0.21707888346885532 NRMSE: 0.17862164360146082 MAPE: 646.4624885962166 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: RandomForests Pearson Correlation: 0.42423575986792816 Spearman Correlation: 0.3900920743897405 Coefficient of Determination: 0.17872988250879573 RMSE: 0.18823203180742976 NRMSE: 0.14166311576274318 MAPE: 417.9297769450251 Pearson Correlation: 0.13033387649362008 Spearman Correlation: 0.22635278212279497 Coefficient of Determination: -0.22105868202915246 RMSE: 0.21871289945196223 NRMSE: 0.17996618073888115 MAPE: 756.7517940538664 Protein: PTEN x_train_column_count: 3 x_train columns: ['mRNA_PTEN', 'DNA_PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.430308333743975 Spearman Correlation: 0.4633292902892238 Coefficient of Determination: 0.18516526208951622 RMSE: 0.5630475366114667 NRMSE: 0.08803807937009876 MAPE: 291.94367063050237 Pearson Correlation: 0.39376710515770297 Spearman Correlation: 0.34454687347575846 Coefficient of Determination: 0.09129103759274926 RMSE: 0.48771773476180363 NRMSE: 0.1635758434269532 MAPE: 582.5515737502973 Predictor: ElasticNet Pearson Correlation: 0.4077673357170652 Spearman Correlation: 0.4627374797628232 Coefficient of Determination: 0.03187267942657768 RMSE: 0.6137288416178032 NRMSE: 0.09596260520956972 MAPE: 246.1520593637891 Pearson Correlation: 0.3799146499312148 Spearman Correlation: 0.3421080870159009 Coefficient of Determination: 0.04457702194345203 RMSE: 0.500096693665667 NRMSE: 0.16772762733621782 MAPE: 422.3664052367642 Predictor: RandomForests Pearson Correlation: 0.4822582186220226 Spearman Correlation: 0.4976141801724072 Coefficient of Determination: 0.22618424042930263 RMSE: 0.5486925710344498 NRMSE: 0.0857935378054022 MAPE: 279.1217603166806 Pearson Correlation: 0.331205192778205 Spearman Correlation: 0.32553763483158277 Coefficient of Determination: 0.06697912535133244 RMSE: 0.4941989547437926 NRMSE: 0.16574958235302947 MAPE: 614.5946555477958 Protein: BRCA2 x_train_column_count: 3 x_train columns: ['mRNA_BRCA2', 'DNA_BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.04354041876643128 Spearman Correlation: 0.06411070678083816 Coefficient of Determination: 0.0018957680663561627 RMSE: 0.19513916273414944 NRMSE: 0.12571374632575258 MAPE: 115.52000517637633 Pearson Correlation: -0.08069036425117294 Spearman Correlation: -0.14521997853867918 Coefficient of Determination: -0.0272601331885014 RMSE: 0.19580321210540141 NRMSE: 0.1325385743912338 MAPE: 119.78626761553635 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: RandomForests Pearson Correlation: 0.3182480749407697 Spearman Correlation: 0.25277475189632104 Coefficient of Determination: 0.057482583285449085 RMSE: 0.1896274395008869 NRMSE: 0.12216295023410334 MAPE: 117.74965665255665 Pearson Correlation: 0.10540044416266692 Spearman Correlation: 0.06982886661471256 Coefficient of Determination: -0.006322419626726639 RMSE: 0.1937974995053621 NRMSE: 0.13118091388204536 MAPE: 109.48560644974674 Protein: CDKN2A x_train_column_count: 3 x_train columns: ['mRNA_CDKN2A', 'DNA_CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.5114269887242209 Spearman Correlation: 0.421390017782988 Coefficient of Determination: 0.2615575647955246 RMSE: 0.5700300951369379 NRMSE: 0.12886404320943548 MAPE: 165.434745848509 Pearson Correlation: 0.5556238442766467 Spearman Correlation: 0.5176421812506098 Coefficient of Determination: 0.29610562447046385 RMSE: 0.5649990242763141 NRMSE: 0.15263643404914473 MAPE: 188.81134911787154 Predictor: ElasticNet Pearson Correlation: 0.5108985010396406 Spearman Correlation: 0.4272478338510351 Coefficient of Determination: 0.0392338399683273 RMSE: 0.6502020152866084 NRMSE: 0.1469881350257959 MAPE: 281.5073001071029 Pearson Correlation: 0.5625411115256918 Spearman Correlation: 0.5269046922251489 Coefficient of Determination: 0.03302314879590662 RMSE: 0.6622195366527049 NRMSE: 0.17890089060209233 MAPE: 240.44098014508464 Predictor: RandomForests Pearson Correlation: 0.6099109413701264 Spearman Correlation: 0.4890325719324427 Coefficient of Determination: 0.37084429209229297 RMSE: 0.5261608528001954 NRMSE: 0.11894672833733363 MAPE: 258.92294088634793 Pearson Correlation: 0.6814150338271348 Spearman Correlation: 0.5686824725091613 Coefficient of Determination: 0.44683974780220026 RMSE: 0.500863556855956 NRMSE: 0.1353100164404463 MAPE: 210.33707010811864 Protein: TP53 x_train_column_count: 3 x_train columns: ['mRNA_TP53', 'DNA_TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 0.5089851407935634 Spearman Correlation: 0.4318947211131587 Coefficient of Determination: 0.2590658735486435 RMSE: 0.39193020494550723 NRMSE: 0.10497661843993766 MAPE: 342.2246604368844 Pearson Correlation: 0.5108069242821148 Spearman Correlation: 0.4486684225929178 Coefficient of Determination: 0.25353443402639986 RMSE: 0.3537001211064033 NRMSE: 0.11648283257250232 MAPE: 1890.2813927619218 Predictor: ElasticNet Pearson Correlation: 0.41407774446365936 Spearman Correlation: 0.42181987707319435 Coefficient of Determination: 0.141478704213303 RMSE: 0.4218853761592253 NRMSE: 0.11299996682984473 MAPE: 330.5996468489922 Pearson Correlation: 0.3681152329639372 Spearman Correlation: 0.3812554872695347 Coefficient of Determination: 0.1170684373312817 RMSE: 0.3846748916837201 NRMSE: 0.12668364619915037 MAPE: 1583.0208302206152 Predictor: RandomForests Pearson Correlation: 0.5650362928773421 Spearman Correlation: 0.49644063857988907 Coefficient of Determination: 0.31189271803654317 RMSE: 0.37770002396838825 NRMSE: 0.10116513297666754 MAPE: 417.0528880928532 Pearson Correlation: 0.5339125318635124 Spearman Correlation: 0.42117820261233396 Coefficient of Determination: 0.27747543880771175 RMSE: 0.3479818771870137 NRMSE: 0.11459966316055117 MAPE: 1960.7005380272312 Protein: CTNNB1 x_train_column_count: 3 x_train columns: ['mRNA_CTNNB1', 'DNA_CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.10148571420360308 Spearman Correlation: 0.1309787120425295 Coefficient of Determination: 0.010299350187415346 RMSE: 0.7212404940853107 NRMSE: 0.14186477066980935 MAPE: 590.4196344581454 Pearson Correlation: 0.06390237276745699 Spearman Correlation: 0.01468637206126232 Coefficient of Determination: -0.13222004207433025 RMSE: 0.8156370677085635 NRMSE: 0.2029907338564405 MAPE: 176.65526040894858 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: RandomForests Pearson Correlation: 0.3190111485131608 Spearman Correlation: 0.2990164726438582 Coefficient of Determination: 0.07674871349886081 RMSE: 0.6966074828316737 NRMSE: 0.13701956782684377 MAPE: 629.8261580498948 Pearson Correlation: 0.02154683087540455 Spearman Correlation: 0.08252414257253307 Coefficient of Determination: -0.1575105927140954 RMSE: 0.8246962552111499 NRMSE: 0.20524532869046314 MAPE: 562.1645050760746 Protein: CCNE1 x_train_column_count: 3 x_train columns: ['mRNA_CCNE1', 'DNA_CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.7307115117358941 Spearman Correlation: 0.6957595752060368 Coefficient of Determination: 0.5339393133833559 RMSE: 0.3500794461341022 NRMSE: 0.08448474699763549 MAPE: 91.51571756250921 Pearson Correlation: 0.7731113386348979 Spearman Correlation: 0.7420446785679446 Coefficient of Determination: 0.463079226242613 RMSE: 0.3064892684884464 NRMSE: 0.16657115989132898 MAPE: 56.19732894201306 Predictor: ElasticNet Pearson Correlation: 0.6272268425254546 Spearman Correlation: 0.3983549418378763 Coefficient of Determination: 0.0941260202707358 RMSE: 0.48806680454066403 NRMSE: 0.11778526547304681 MAPE: 117.40343003587668 Pearson Correlation: 0.4691655578836094 Spearman Correlation: 0.4754365427763146 Coefficient of Determination: 0.05033467454254548 RMSE: 0.40761059069933936 NRMSE: 0.2215286989056133 MAPE: 80.01124638703861 Predictor: RandomForests Pearson Correlation: 0.8576015896223816 Spearman Correlation: 0.7101682702645096 Coefficient of Determination: 0.7315699874654313 RMSE: 0.26568125478367666 NRMSE: 0.06411691357571173 MAPE: 67.82534859215743 Pearson Correlation: 0.8352160796597063 Spearman Correlation: 0.7370836679134409 Coefficient of Determination: 0.6942453932120536 RMSE: 0.23128457717338924 NRMSE: 0.12569882291392304 MAPE: 40.51900629093152 Protein: CCND1 x_train_column_count: 3 x_train columns: ['mRNA_CCND1', 'DNA_CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.43827829198653606 Spearman Correlation: 0.3720896586378001 Coefficient of Determination: 0.19208786122663546 RMSE: 0.21459250255865517 NRMSE: 0.12900680679482943 MAPE: 557.5215311736497 Pearson Correlation: 0.2679300859080714 Spearman Correlation: 0.3661593990830163 Coefficient of Determination: 0.05985053919515293 RMSE: 0.2282756314682824 NRMSE: 0.17660737719586123 MAPE: 329.67643302543075 Predictor: ElasticNet Pearson Correlation: 0.33715494318091815 Spearman Correlation: 0.22262149005650733 Coefficient of Determination: 0.0411274725860058 RMSE: 0.23378299373017872 NRMSE: 0.14054357512244575 MAPE: 632.3630112345736 Pearson Correlation: 0.17901952953212236 Spearman Correlation: 0.25729544485559425 Coefficient of Determination: 0.018200466731983833 RMSE: 0.2332773176031094 NRMSE: 0.18047697406937352 MAPE: 403.1780872569071 Predictor: RandomForests Pearson Correlation: 0.5040707623731179 Spearman Correlation: 0.41626162506331177 Coefficient of Determination: 0.24934033281191292 RMSE: 0.206849282485278 NRMSE: 0.12435180681083431 MAPE: 488.9863622367476 Pearson Correlation: 0.32093332535895036 Spearman Correlation: 0.3843632172233007 Coefficient of Determination: 0.09288217954551525 RMSE: 0.22422960484198548 NRMSE: 0.17347713440148657 MAPE: 339.17834391246726 Protein: ERBB2 x_train_column_count: 3 x_train columns: ['mRNA_ERBB2', 'DNA_ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.8201830410950423 Spearman Correlation: 0.6324311838599934 Coefficient of Determination: 0.672700220899912 RMSE: 0.5623804677776286 NRMSE: 0.10092429836470193 MAPE: 231.9199639057867 Pearson Correlation: 0.8392149687835658 Spearman Correlation: 0.5356648131889573 Coefficient of Determination: 0.6959840904398478 RMSE: 0.5829159880152918 NRMSE: 0.09930933233645532 MAPE: 517.3102898577605 Predictor: ElasticNet Pearson Correlation: 0.8116533979235263 Spearman Correlation: 0.6140775396985112 Coefficient of Determination: 0.4356168422811836 RMSE: 0.7384896195319477 NRMSE: 0.1325286900439581 MAPE: 307.9772505354263 Pearson Correlation: 0.826478812032557 Spearman Correlation: 0.5251633986928105 Coefficient of Determination: 0.43153839152563256 RMSE: 0.7970918731336534 NRMSE: 0.13579771932699344 MAPE: 946.7840085679272 Predictor: RandomForests Pearson Correlation: 0.8393681646532969 Spearman Correlation: 0.6676315422093884 Coefficient of Determination: 0.702884506830249 RMSE: 0.5358213595112853 NRMSE: 0.09615802442641015 MAPE: 278.44547541829206 Pearson Correlation: 0.8260087732684012 Spearman Correlation: 0.5016052552161129 Coefficient of Determination: 0.6598165722013368 RMSE: 0.6166154296199134 NRMSE: 0.10505058684769468 MAPE: 1435.1249821672902 Protein: ERBB3 x_train_column_count: 3 x_train columns: ['mRNA_ERBB3', 'DNA_ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.414178584513212 Spearman Correlation: 0.45631530527777064 Coefficient of Determination: 0.1715438998693679 RMSE: 0.4051581685053786 NRMSE: 0.10934056098291947 MAPE: 181.64925990782854 Pearson Correlation: 0.3774999830564038 Spearman Correlation: 0.442722661203785 Coefficient of Determination: 0.13868797504756547 RMSE: 0.48053136573112826 NRMSE: 0.17734467787788125 MAPE: 301.68018345818297 Predictor: ElasticNet Pearson Correlation: 0.41402025545880744 Spearman Correlation: 0.4574811032948563 Coefficient of Determination: 0.04505311002035017 RMSE: 0.43499018578139437 NRMSE: 0.11739136621842691 MAPE: 209.10771780976933 Pearson Correlation: 0.38212391915057364 Spearman Correlation: 0.4416544727343674 Coefficient of Determination: 0.039804617197458425 RMSE: 0.5073659198963146 NRMSE: 0.18724822570806457 MAPE: 282.6400886562516 Predictor: RandomForests Pearson Correlation: 0.4948025282576432 Spearman Correlation: 0.47521126721943224 Coefficient of Determination: 0.24314163899124053 RMSE: 0.3872551086637604 NRMSE: 0.10450903897852645 MAPE: 215.727702415682 Pearson Correlation: 0.43715709398351393 Spearman Correlation: 0.44368045103374026 Coefficient of Determination: 0.18883583916108804 RMSE: 0.46633269199872135 NRMSE: 0.1721045220858954 MAPE: 359.6369033984502 Fold: 3 Protein: RB1 x_train_column_count: 3 x_train columns: ['mRNA_RB1', 'DNA_RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.20906181056089143 Spearman Correlation: 0.2900890900991774 Coefficient of Determination: 0.04370684063499808 RMSE: 0.2352648861406256 NRMSE: 0.08603894314680574 MAPE: 185.933933485453 Pearson Correlation: 0.23642252835836453 Spearman Correlation: 0.27571665482113245 Coefficient of Determination: 0.03360085360225584 RMSE: 0.21790918378871962 NRMSE: 0.15290370334754452 MAPE: 235.6961917274888 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: RandomForests Pearson Correlation: 0.3321500435568105 Spearman Correlation: 0.3700495558888307 Coefficient of Determination: 0.09724425788234992 RMSE: 0.22858446817082875 NRMSE: 0.08359584119764071 MAPE: 259.44880092513915 Pearson Correlation: 0.2471121837236988 Spearman Correlation: 0.2760265866342014 Coefficient of Determination: 0.03325030514547089 RMSE: 0.21794870203668099 NRMSE: 0.15293143272708715 MAPE: 208.57317062402575 Protein: CDH1 x_train_column_count: 3 x_train columns: ['mRNA_CDH1', 'DNA_CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.6328183131710179 Spearman Correlation: 0.6075465134823047 Coefficient of Determination: 0.4004590174846122 RMSE: 0.9095770982875896 NRMSE: 0.14483250506155687 MAPE: 508.3264784302217 Pearson Correlation: 0.6721696534233547 Spearman Correlation: 0.4740682552151524 Coefficient of Determination: 0.43660925129188133 RMSE: 0.7067138028288735 NRMSE: 0.13893638242222184 MAPE: 238.4838938410049 Predictor: ElasticNet Pearson Correlation: 0.5899068177212581 Spearman Correlation: 0.581855995762249 Coefficient of Determination: 0.2645692182342195 RMSE: 1.007397760512825 NRMSE: 0.16040854758014472 MAPE: 433.96927280174583 Pearson Correlation: 0.6541561339464592 Spearman Correlation: 0.4665270140525444 Coefficient of Determination: 0.2801797057823976 RMSE: 0.7988233689761074 NRMSE: 0.15704466027918598 MAPE: 215.63817297054828 Predictor: RandomForests Pearson Correlation: 0.7276193835823498 Spearman Correlation: 0.6282039002441692 Coefficient of Determination: 0.52828658097083 RMSE: 0.8068061403091166 NRMSE: 0.12846822399113347 MAPE: 278.7769631566057 Pearson Correlation: 0.7454686209002703 Spearman Correlation: 0.4734637054013533 Coefficient of Determination: 0.5527506644339515 RMSE: 0.6296708231298473 NRMSE: 0.12379011975186714 MAPE: 177.4955738279887 Protein: CDH2 x_train_column_count: 3 x_train columns: ['mRNA_CDH2', 'DNA_CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.14931543567140948 Spearman Correlation: 0.032234905130690474 Coefficient of Determination: 0.022295099329742607 RMSE: 0.3769641419583058 NRMSE: 0.1365911087608906 MAPE: 217.61934702434127 Pearson Correlation: 0.12832620363829544 Spearman Correlation: 0.09770944774872506 Coefficient of Determination: 0.012369155985872848 RMSE: 0.3299189033662857 NRMSE: 0.17383549189953304 MAPE: 391.30515551810146 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: RandomForests Pearson Correlation: 0.2998198410354794 Spearman Correlation: 0.258562062688629 Coefficient of Determination: 0.06758489183196303 RMSE: 0.36812964803246534 NRMSE: 0.13338997319822646 MAPE: 341.91459703673723 Pearson Correlation: 0.04221775449210925 Spearman Correlation: -0.08782037960224189 Coefficient of Determination: -0.014558251305437198 RMSE: 0.33438621956538456 NRMSE: 0.176189337347664 MAPE: 273.39915855543035 Protein: CDH3 x_train_column_count: 3 x_train columns: ['mRNA_CDH3', 'DNA_CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.3037049619355422 Spearman Correlation: 0.33579287082700443 Coefficient of Determination: 0.09223670390426897 RMSE: 0.20247300005295085 NRMSE: 0.14205042940236212 MAPE: 364.23473729610356 Pearson Correlation: 0.2243437722100556 Spearman Correlation: 0.2938714946570406 Coefficient of Determination: 0.02269108262028885 RMSE: 0.1861793243256984 NRMSE: 0.16194153481059642 MAPE: 148.2139016978786 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: RandomForests Pearson Correlation: 0.38911185760892086 Spearman Correlation: 0.369296183735944 Coefficient of Determination: 0.14910523717296142 RMSE: 0.19602828201646763 NRMSE: 0.13752896251927066 MAPE: 478.86177452504074 Pearson Correlation: 0.265388563260742 Spearman Correlation: 0.30083105858774284 Coefficient of Determination: 0.053494817443916265 RMSE: 0.18322174593174018 NRMSE: 0.1593689893027914 MAPE: 189.0779148619557 Protein: PTEN x_train_column_count: 3 x_train columns: ['mRNA_PTEN', 'DNA_PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 0.4173920584080784 Spearman Correlation: 0.43230689448688175 Coefficient of Determination: 0.1742161304221327 RMSE: 0.5718564298008542 NRMSE: 0.08941543738579534 MAPE: 346.9712456051448 Pearson Correlation: 0.3733634355630606 Spearman Correlation: 0.38894001172084447 Coefficient of Determination: 0.12725347431953982 RMSE: 0.43997360539608404 NRMSE: 0.1051914133304844 MAPE: 130.97878252566596 Predictor: ElasticNet Pearson Correlation: 0.3863626764308424 Spearman Correlation: 0.4288943921736001 Coefficient of Determination: 0.03810146341605569 RMSE: 0.617189377668818 NRMSE: 0.0965036944208925 MAPE: 276.5043445584624 Pearson Correlation: 0.31802628254150217 Spearman Correlation: 0.4125063903539945 Coefficient of Determination: -0.022426187242061246 RMSE: 0.47621003324760197 NRMSE: 0.11385502635862908 MAPE: 91.74680021655425 Predictor: RandomForests Pearson Correlation: 0.4633203795379582 Spearman Correlation: 0.4620914068616879 Coefficient of Determination: 0.20670767363397735 RMSE: 0.56049331553177 NRMSE: 0.08763870151384097 MAPE: 457.7437175681701 Pearson Correlation: 0.3834518426201456 Spearman Correlation: 0.4069254029650803 Coefficient of Determination: 0.14346586379011672 RMSE: 0.4358679110110523 NRMSE: 0.10420980036605278 MAPE: 125.56909459965324 Protein: BRCA2 x_train_column_count: 3 x_train columns: ['mRNA_BRCA2', 'DNA_BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.05158877962698897 Spearman Correlation: 0.04564328942333082 Coefficient of Determination: 0.0026614021834020507 RMSE: 0.1897970804221519 NRMSE: 0.12791974255395352 MAPE: 115.63062783871668 Pearson Correlation: -0.08034642559386025 Spearman Correlation: -0.05363408521303259 Coefficient of Determination: -0.013463242593510838 RMSE: 0.21556805164586199 NRMSE: 0.1482698496075095 MAPE: 108.67907953219245 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: RandomForests Pearson Correlation: 0.31999070879490765 Spearman Correlation: 0.2477267386041007 Coefficient of Determination: 0.061794670002502494 RMSE: 0.18408447447531423 NRMSE: 0.12406955117900563 MAPE: 126.72504056736243 Pearson Correlation: -0.011238750060220877 Spearman Correlation: -0.08083916728760582 Coefficient of Determination: -0.015255120277996692 RMSE: 0.21575853758389332 NRMSE: 0.14840086772994748 MAPE: 122.90841325769719 Protein: CDKN2A x_train_column_count: 3 x_train columns: ['mRNA_CDKN2A', 'DNA_CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.5125835327926108 Spearman Correlation: 0.4336429518634918 Coefficient of Determination: 0.2627418780901536 RMSE: 0.5732160550929118 NRMSE: 0.13382892582483 MAPE: 188.7587520263012 Pearson Correlation: 0.5522357778133558 Spearman Correlation: 0.532722353146548 Coefficient of Determination: 0.29619350676231526 RMSE: 0.5507932739906384 NRMSE: 0.17004515883752844 MAPE: 119.4419089690516 Predictor: ElasticNet Pearson Correlation: 0.5120880068475342 Spearman Correlation: 0.42302661172740513 Coefficient of Determination: 0.039485681106013915 RMSE: 0.6542752392234964 NRMSE: 0.15275383807048384 MAPE: 298.46029172744716 Pearson Correlation: 0.5553592089266944 Spearman Correlation: 0.5192159503235703 Coefficient of Determination: 0.034730548309517606 RMSE: 0.6450394472694176 NRMSE: 0.19914156625896626 MAPE: 171.08307685507293 Predictor: RandomForests Pearson Correlation: 0.6267342324625859 Spearman Correlation: 0.4979066303432582 Coefficient of Determination: 0.3920174432495791 RMSE: 0.5205400181119146 NRMSE: 0.12153063553229236 MAPE: 264.0374073954278 Pearson Correlation: 0.6271026913419488 Spearman Correlation: 0.5728813153345717 Coefficient of Determination: 0.39022470913901564 RMSE: 0.5126806244426771 NRMSE: 0.15827872694349576 MAPE: 124.13607839156002 Protein: TP53 x_train_column_count: 3 x_train columns: ['mRNA_TP53', 'DNA_TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.5191360566570266 Spearman Correlation: 0.43024227009428323 Coefficient of Determination: 0.2695022453214073 RMSE: 0.3847076404534634 NRMSE: 0.0924555732885036 MAPE: 706.0433011042354 Pearson Correlation: 0.4779190135996074 Spearman Correlation: 0.4491402635943092 Coefficient of Determination: 0.20146229916852443 RMSE: 0.38465266630641193 NRMSE: 0.1434366635615645 MAPE: 423.470038699242 Predictor: ElasticNet Pearson Correlation: 0.42981494555150085 Spearman Correlation: 0.4149155626650531 Coefficient of Determination: 0.14923851401684607 RMSE: 0.41516934563435764 NRMSE: 0.09977633877297709 MAPE: 592.0417878959264 Pearson Correlation: 0.3568296991592001 Spearman Correlation: 0.4284168131772217 Coefficient of Determination: 0.10052329042227959 RMSE: 0.40824041418264795 NRMSE: 0.15223251538494306 MAPE: 321.0219558000427 Predictor: RandomForests Pearson Correlation: 0.5661433482472996 Spearman Correlation: 0.49654762723769663 Coefficient of Determination: 0.31248196726049127 RMSE: 0.3732187171812704 NRMSE: 0.08969447661169681 MAPE: 671.5692031281067 Pearson Correlation: 0.47378867648689216 Spearman Correlation: 0.4489145730466492 Coefficient of Determination: 0.21270148958171364 RMSE: 0.3819361355432893 NRMSE: 0.14242367146959167 MAPE: 386.88985379521375 Protein: CTNNB1 x_train_column_count: 3 x_train columns: ['mRNA_CTNNB1', 'DNA_CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.06338009029752081 Spearman Correlation: 0.08633119498695128 Coefficient of Determination: 0.004017035846122119 RMSE: 0.7676509388043595 NRMSE: 0.15099349701108566 MAPE: 432.3318344203724 Pearson Correlation: 0.19702690249754237 Spearman Correlation: 0.24086335241087797 Coefficient of Determination: 0.012306409738177093 RMSE: 0.6091869629375852 NRMSE: 0.19915229753754132 MAPE: 1289.8785304708385 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: RandomForests Pearson Correlation: 0.3508430461268562 Spearman Correlation: 0.309013951041836 Coefficient of Determination: 0.06480099241539428 RMSE: 0.7438576760962169 NRMSE: 0.14631346894103403 MAPE: 464.8922382972854 Pearson Correlation: 0.25688610390689304 Spearman Correlation: 0.22785221110455883 Coefficient of Determination: 0.02988076350776636 RMSE: 0.6037429062448255 NRMSE: 0.19737255426618244 MAPE: 1391.500422533768 Protein: CCNE1 x_train_column_count: 3 x_train columns: ['mRNA_CCNE1', 'DNA_CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.7314003230267211 Spearman Correlation: 0.7217623240217748 Coefficient of Determination: 0.5349464325235923 RMSE: 0.3562654955534039 NRMSE: 0.08597762761623765 MAPE: 77.52738674237077 Pearson Correlation: 0.6703705524680659 Spearman Correlation: 0.6748238756094217 Coefficient of Determination: 0.4380789486264728 RMSE: 0.27352560353568034 NRMSE: 0.1191469284033978 MAPE: 98.41879547639402 Predictor: ElasticNet Pearson Correlation: 0.611569934274914 Spearman Correlation: 0.42420661178789815 Coefficient of Determination: 0.0813009886739875 RMSE: 0.5007360938765039 NRMSE: 0.12084274775599195 MAPE: 103.44133317103402 Pearson Correlation: 0.6172125718713096 Spearman Correlation: 0.4205064901058617 Coefficient of Determination: 0.0871414636430291 RMSE: 0.3486278473442282 NRMSE: 0.151861239423369 MAPE: 132.1728839398527 Predictor: RandomForests Pearson Correlation: 0.8620691956243819 Spearman Correlation: 0.7258461435512167 Coefficient of Determination: 0.7409446961842998 RMSE: 0.26590010990733026 NRMSE: 0.06416972992912862 MAPE: 55.84380489692009 Pearson Correlation: 0.7701643879178106 Spearman Correlation: 0.6683266662561321 Coefficient of Determination: 0.5244794807311457 RMSE: 0.251619888021991 NRMSE: 0.10960486475671515 MAPE: 78.04060369885696 Protein: CCND1 x_train_column_count: 3 x_train columns: ['mRNA_CCND1', 'DNA_CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.4157243312970458 Spearman Correlation: 0.39279449001428085 Coefficient of Determination: 0.17282671963237584 RMSE: 0.22251267964118898 NRMSE: 0.1337681882153569 MAPE: 550.0812067345653 Pearson Correlation: 0.3771844108494548 Spearman Correlation: 0.3178967318794499 Coefficient of Determination: 0.12537428261043815 RMSE: 0.1961514566227935 NRMSE: 0.18586741267925055 MAPE: 335.21570950955544 Predictor: ElasticNet Pearson Correlation: 0.30988464507133273 Spearman Correlation: 0.25161611066271383 Coefficient of Determination: 0.03349419911030438 RMSE: 0.24052418274828996 NRMSE: 0.14459618301348426 MAPE: 624.5711713380749 Pearson Correlation: 0.28126831409085906 Spearman Correlation: 0.13167436442969763 Coefficient of Determination: 0.032891048627212593 RMSE: 0.20626147423750793 NRMSE: 0.195447371189588 MAPE: 448.7195235481159 Predictor: RandomForests Pearson Correlation: 0.48860514451656034 Spearman Correlation: 0.43504145506937325 Coefficient of Determination: 0.23412216603759417 RMSE: 0.21410966174526241 NRMSE: 0.1287165368609626 MAPE: 533.2034154025292 Pearson Correlation: 0.36968779167919275 Spearman Correlation: 0.34354700584606596 Coefficient of Determination: 0.12687567696399638 RMSE: 0.1959830261855674 NRMSE: 0.18570781289792518 MAPE: 242.45342663339522 Protein: ERBB2 x_train_column_count: 3 x_train columns: ['mRNA_ERBB2', 'DNA_ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 0.8072174404386134 Spearman Correlation: 0.5979146922937387 Coefficient of Determination: 0.6515999961482668 RMSE: 0.5791780769065523 NRMSE: 0.0986725176595997 MAPE: 315.81082913823883 Pearson Correlation: 0.8785285562416989 Spearman Correlation: 0.6958923376759953 Coefficient of Determination: 0.7693825066587203 RMSE: 0.5121813220759595 NRMSE: 0.09239146440507243 MAPE: 115.00149160867268 Predictor: ElasticNet Pearson Correlation: 0.7976276444634737 Spearman Correlation: 0.5816187851851947 Coefficient of Determination: 0.4085487246150672 RMSE: 0.7546273221782602 NRMSE: 0.1285631841794743 MAPE: 459.39433453371737 Pearson Correlation: 0.8713315235718576 Spearman Correlation: 0.676121492938708 Coefficient of Determination: 0.48965686117102714 RMSE: 0.7619189116338501 NRMSE: 0.13744117750809043 MAPE: 194.06836422439073 Predictor: RandomForests Pearson Correlation: 0.8242163453946054 Spearman Correlation: 0.6402041160595304 Coefficient of Determination: 0.6769950273006478 RMSE: 0.5576704636110034 NRMSE: 0.09500834175698986 MAPE: 500.4934645193762 Pearson Correlation: 0.8707861704837472 Spearman Correlation: 0.7083132070906469 Coefficient of Determination: 0.7562631320029732 RMSE: 0.5265483136924883 NRMSE: 0.09498310009605461 MAPE: 184.73867419549478 Protein: ERBB3 x_train_column_count: 3 x_train columns: ['mRNA_ERBB3', 'DNA_ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.4155179506876611 Spearman Correlation: 0.44882116730356786 Coefficient of Determination: 0.1726551673436737 RMSE: 0.41022681554070656 NRMSE: 0.1487476986009879 MAPE: 207.46441821654068 Pearson Correlation: 0.39300851730124586 Spearman Correlation: 0.4283669372436066 Coefficient of Determination: 0.12955574654445756 RMSE: 0.4615635320487284 NRMSE: 0.12832794385173515 MAPE: 147.52332011894035 Predictor: ElasticNet Pearson Correlation: 0.41183478053528383 Spearman Correlation: 0.4548855783210745 Coefficient of Determination: 0.04755145498089686 RMSE: 0.4401508325951001 NRMSE: 0.15959810745071382 MAPE: 228.9864985313079 Pearson Correlation: 0.3951794335303434 Spearman Correlation: 0.4259180289031036 Coefficient of Determination: 0.025392691162460124 RMSE: 0.48840020639274356 NRMSE: 0.1357893115709303 MAPE: 155.3064269485719 Predictor: RandomForests Pearson Correlation: 0.5060684091191713 Spearman Correlation: 0.4922400329959107 Coefficient of Determination: 0.254755900166885 RMSE: 0.3893409099380018 NRMSE: 0.14117449696251158 MAPE: 238.344304367678 Pearson Correlation: 0.40555691012348677 Spearman Correlation: 0.4000413709929832 Coefficient of Determination: 0.13753372841618894 RMSE: 0.45944345260561215 NRMSE: 0.12773850075918874 MAPE: 164.7583665614893 Fold: 4 Protein: RB1 x_train_column_count: 3 x_train columns: ['mRNA_RB1', 'DNA_RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.2046934487238742 Spearman Correlation: 0.2638035826457963 Coefficient of Determination: 0.04189940795047331 RMSE: 0.24618538056260422 NRMSE: 0.09003268744975286 MAPE: 265.65680235894604 Pearson Correlation: 0.3114279587480756 Spearman Correlation: 0.3860122944176362 Coefficient of Determination: 0.017855139745728055 RMSE: 0.16340372044825452 NRMSE: 0.15655896260324084 MAPE: 110.72740490569541 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: RandomForests Pearson Correlation: 0.3462170390140414 Spearman Correlation: 0.37509748290870165 Coefficient of Determination: 0.10412397390728556 RMSE: 0.23805683892960428 NRMSE: 0.08705999083148196 MAPE: 306.9852759388363 Pearson Correlation: 0.2419010168517363 Spearman Correlation: 0.33507815097347543 Coefficient of Determination: -0.0304798077326236 RMSE: 0.1673762793132277 NRMSE: 0.1603651164232052 MAPE: 110.36165825622047 Protein: CDH1 x_train_column_count: 3 x_train columns: ['mRNA_CDH1', 'DNA_CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 0.6286147487551992 Spearman Correlation: 0.6067670391716472 Coefficient of Determination: 0.3951565023525623 RMSE: 0.8702739454574308 NRMSE: 0.13857424054288567 MAPE: 525.0028882819698 Pearson Correlation: 0.6640199683798835 Spearman Correlation: 0.43704534969263964 Coefficient of Determination: 0.4148442907794493 RMSE: 0.8922792210772201 NRMSE: 0.1618735207498313 MAPE: 268.4821812560575 Predictor: ElasticNet Pearson Correlation: 0.5821807592816665 Spearman Correlation: 0.5866679299570472 Coefficient of Determination: 0.25645005815893407 RMSE: 0.9649160839134916 NRMSE: 0.15364416482173998 MAPE: 448.2152586342245 Pearson Correlation: 0.6666161108276168 Spearman Correlation: 0.4002169603112259 Coefficient of Determination: 0.22217488173458255 RMSE: 1.0287409744072569 NRMSE: 0.1866298346227018 MAPE: 276.723747074598 Predictor: RandomForests Pearson Correlation: 0.7210350753965069 Spearman Correlation: 0.6197542197054043 Coefficient of Determination: 0.5187108406172025 RMSE: 0.7763141701129105 NRMSE: 0.12361296935016566 MAPE: 346.1931662651616 Pearson Correlation: 0.7573263588368068 Spearman Correlation: 0.4502703262535351 Coefficient of Determination: 0.5218686736792134 RMSE: 0.8065636687849284 NRMSE: 0.14632336794472775 MAPE: 166.38047571425295 Protein: CDH2 x_train_column_count: 3 x_train columns: ['mRNA_CDH2', 'DNA_CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.13282986793863621 Spearman Correlation: 0.040213172180825214 Coefficient of Determination: 0.017643773816595654 RMSE: 0.376001939188154 NRMSE: 0.13624245930435322 MAPE: 584.6956953205171 Pearson Correlation: 0.199277503184848 Spearman Correlation: 0.032386937492986205 Coefficient of Determination: -0.01617446114668586 RMSE: 0.33595142823568475 NRMSE: 0.17330662593149515 MAPE: 127.24977357056613 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: RandomForests Pearson Correlation: 0.2746626462994443 Spearman Correlation: 0.2302839223567907 Coefficient of Determination: 0.055355246039988204 RMSE: 0.36871418191701427 NRMSE: 0.13360177618559835 MAPE: 395.9146542498337 Pearson Correlation: 0.1659420975878766 Spearman Correlation: 0.01170280292879656 Coefficient of Determination: -0.027235437892395353 RMSE: 0.3377748816795384 NRMSE: 0.17424728740019932 MAPE: 158.52821883559227 Protein: CDH3 x_train_column_count: 3 x_train columns: ['mRNA_CDH3', 'DNA_CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.2601046552149239 Spearman Correlation: 0.32971494896928316 Coefficient of Determination: 0.06765443166447438 RMSE: 0.19882273960705912 NRMSE: 0.14169843323336168 MAPE: 171.39305572210006 Pearson Correlation: 0.3964660458922397 Spearman Correlation: 0.3050387161934688 Coefficient of Determination: 0.035114198763392834 RMSE: 0.2041152940367816 NRMSE: 0.1816715862690973 MAPE: 579.5580671701683 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: RandomForests Pearson Correlation: 0.36864805089403657 Spearman Correlation: 0.3616203756772695 Coefficient of Determination: 0.13347585705457865 RMSE: 0.1916760857543874 NRMSE: 0.13660510409110097 MAPE: 236.82212495859406 Pearson Correlation: 0.34666151264379064 Spearman Correlation: 0.28083039109178015 Coefficient of Determination: 0.03155081912662705 RMSE: 0.20449185154803998 NRMSE: 0.18200673901066267 MAPE: 834.0365079413169 Protein: PTEN x_train_column_count: 3 x_train columns: ['mRNA_PTEN', 'DNA_PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 0.4023646675334011 Spearman Correlation: 0.4208824134682371 Coefficient of Determination: 0.1618973256792644 RMSE: 0.5142992432276398 NRMSE: 0.09948530703103524 MAPE: 236.8337844971261 Pearson Correlation: 0.470873858729993 Spearman Correlation: 0.5017693487449969 Coefficient of Determination: 0.1812106902479409 RMSE: 0.6746449995895468 NRMSE: 0.10548745205058976 MAPE: 509.62682733908133 Predictor: ElasticNet Pearson Correlation: 0.4012162162255928 Spearman Correlation: 0.41806890807208247 Coefficient of Determination: 0.024919689642815324 RMSE: 0.554737424010683 NRMSE: 0.10730761064892506 MAPE: 255.81251236033174 Pearson Correlation: 0.45003315181105336 Spearman Correlation: 0.4913652289928802 Coefficient of Determination: 0.018747328051457846 RMSE: 0.7385495706802899 NRMSE: 0.11547956698933468 MAPE: 370.95853476997087 Predictor: RandomForests Pearson Correlation: 0.4656404737865962 Spearman Correlation: 0.4504429893238428 Coefficient of Determination: 0.20610195518527785 RMSE: 0.500552503968117 NRMSE: 0.09682615753019905 MAPE: 219.70630611894583 Pearson Correlation: 0.4042714355078431 Spearman Correlation: 0.48504549399798236 Coefficient of Determination: 0.14330565070819468 RMSE: 0.6900843445923847 NRMSE: 0.10790154711787736 MAPE: 321.5505281120903 Protein: BRCA2 x_train_column_count: 3 x_train columns: ['mRNA_BRCA2', 'DNA_BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.031381120781656204 Spearman Correlation: 0.0209114132193999 Coefficient of Determination: 0.0009847747415129282 RMSE: 0.19170280556570432 NRMSE: 0.12349995526861288 MAPE: 112.5386450235546 Pearson Correlation: -0.15360301103548862 Spearman Correlation: -0.18366563174104417 Coefficient of Determination: -0.009459554875555387 RMSE: 0.2090893711256086 NRMSE: 0.2031354704856735 MAPE: 147.370917754084 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: RandomForests Pearson Correlation: 0.3451836526548214 Spearman Correlation: 0.26118285695664945 Coefficient of Determination: 0.05353613521347522 RMSE: 0.18659260767094304 NRMSE: 0.12020783228922084 MAPE: 118.00847620847983 Pearson Correlation: 0.12791025809156378 Spearman Correlation: -0.06975152162832544 Coefficient of Determination: 0.01615838057894281 RMSE: 0.20641919978567477 NRMSE: 0.20054133330646237 MAPE: 117.51014809136255 Protein: CDKN2A x_train_column_count: 3 x_train columns: ['mRNA_CDKN2A', 'DNA_CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.5188832504970193 Spearman Correlation: 0.47144283298498774 Coefficient of Determination: 0.2692398276463528 RMSE: 0.5761271558719838 NRMSE: 0.13024237727410054 MAPE: 176.6235004420534 Pearson Correlation: 0.5298305090772333 Spearman Correlation: 0.2798513697178269 Coefficient of Determination: 0.2678555798424671 RMSE: 0.539640150355313 NRMSE: 0.1625911872116038 MAPE: 128.59754005088334 Predictor: ElasticNet Pearson Correlation: 0.5188482019980819 Spearman Correlation: 0.4695929781962768 Coefficient of Determination: 0.0418876517890846 RMSE: 0.6596888294373264 NRMSE: 0.14913277482476012 MAPE: 272.2626228571072 Pearson Correlation: 0.5280583143942136 Spearman Correlation: 0.27084876370029554 Coefficient of Determination: 0.03726160599494277 RMSE: 0.6188138454227818 NRMSE: 0.18644587087158235 MAPE: 190.52446873382857 Predictor: RandomForests Pearson Correlation: 0.6324201705536484 Spearman Correlation: 0.5249378582030331 Coefficient of Determination: 0.3993594896562267 RMSE: 0.5223218832526526 NRMSE: 0.11807887040864758 MAPE: 286.3003637639724 Pearson Correlation: 0.6232110935662796 Spearman Correlation: 0.4715259206137264 Coefficient of Determination: 0.3611191957059581 RMSE: 0.5040989536496223 NRMSE: 0.15188278205773495 MAPE: 126.65421282515818 Protein: TP53 x_train_column_count: 3 x_train columns: ['mRNA_TP53', 'DNA_TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 0.5024169899282644 Spearman Correlation: 0.4476400836830998 Coefficient of Determination: 0.2524228317685776 RMSE: 0.38918448287592083 NRMSE: 0.09353147870125472 MAPE: 716.9271318540173 Pearson Correlation: 0.5375616537301072 Spearman Correlation: 0.34889961221461613 Coefficient of Determination: 0.2860858442447817 RMSE: 0.3648531146737402 NRMSE: 0.11578227807620595 MAPE: 336.0228452994754 Predictor: ElasticNet Pearson Correlation: 0.4119426893595013 Spearman Correlation: 0.4248365487997839 Coefficient of Determination: 0.13670242839758706 RMSE: 0.41822285395132747 NRMSE: 0.100510178791475 MAPE: 628.3146304155263 Pearson Correlation: 0.4171869649733271 Spearman Correlation: 0.3702265614284468 Coefficient of Determination: 0.1402908645691523 RMSE: 0.40037857747909156 NRMSE: 0.12705590806013314 MAPE: 189.06293953118615 Predictor: RandomForests Pearson Correlation: 0.5500984751498655 Spearman Correlation: 0.4997504349151704 Coefficient of Determination: 0.2941271235364914 RMSE: 0.3781732002999231 NRMSE: 0.0908851719057734 MAPE: 695.2142859591731 Pearson Correlation: 0.5731182645219236 Spearman Correlation: 0.4295432697842317 Coefficient of Determination: 0.30903732874725187 RMSE: 0.3589404096871789 NRMSE: 0.11390594366818318 MAPE: 254.3949997626327 Protein: CTNNB1 x_train_column_count: 3 x_train columns: ['mRNA_CTNNB1', 'DNA_CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.11124579514054277 Spearman Correlation: 0.13475019397756866 Coefficient of Determination: 0.012375626936451778 RMSE: 0.7070109499801447 NRMSE: 0.170759093319521 MAPE: 563.6781647775335 Pearson Correlation: -0.07316120019751479 Spearman Correlation: 0.07713562513248295 Coefficient of Determination: -0.1642191967008928 RMSE: 0.8658400442507479 NRMSE: 0.18203684388418717 MAPE: 979.0041905196625 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: RandomForests Pearson Correlation: 0.33046953393513023 Spearman Correlation: 0.3063937409450337 Coefficient of Determination: 0.06835642393636576 RMSE: 0.6866811683253319 NRMSE: 0.16584899244646217 MAPE: 574.9023597951262 Pearson Correlation: 0.053210235766702 Spearman Correlation: 0.11139604046333891 Coefficient of Determination: -0.13973728203284486 RMSE: 0.8566879672367678 NRMSE: 0.1801126833817105 MAPE: 959.2101617909703 Protein: CCNE1 x_train_column_count: 3 x_train columns: ['mRNA_CCNE1', 'DNA_CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.7286400817572336 Spearman Correlation: 0.7091225350184517 Coefficient of Determination: 0.5309163687431881 RMSE: 0.34573888294640764 NRMSE: 0.08343723796278872 MAPE: 76.35374741204208 Pearson Correlation: 0.8207755405473406 Spearman Correlation: 0.7186348956969539 Coefficient of Determination: 0.47913550279402695 RMSE: 0.3262792039777662 NRMSE: 0.13314257895118187 MAPE: 111.37102798468858 Predictor: ElasticNet Pearson Correlation: 0.6325809761846419 Spearman Correlation: 0.44514483253034887 Coefficient of Determination: 0.0874388021374275 RMSE: 0.4822298443384556 NRMSE: 0.11637663062925782 MAPE: 100.95378922078152 Pearson Correlation: 0.4845916875973196 Spearman Correlation: 0.31561241411987684 Coefficient of Determination: 0.04745621353820817 RMSE: 0.44123452809983493 NRMSE: 0.18005163147793804 MAPE: 140.43266784479985 Predictor: RandomForests Pearson Correlation: 0.8558321664550124 Spearman Correlation: 0.7158803290459447 Coefficient of Determination: 0.7289157895599063 RMSE: 0.2628301582132483 NRMSE: 0.06342885783556924 MAPE: 55.54281814763038 Pearson Correlation: 0.8454418160475344 Spearman Correlation: 0.7088136995510649 Coefficient of Determination: 0.7021847735901194 RMSE: 0.24671778934110478 NRMSE: 0.10067648304133878 MAPE: 69.85591672927826 Protein: CCND1 x_train_column_count: 3 x_train columns: ['mRNA_CCND1', 'DNA_CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 0.37468157352694054 Spearman Correlation: 0.35395103891826996 Coefficient of Determination: 0.14038628154062427 RMSE: 0.22280163394164668 NRMSE: 0.14234525110952242 MAPE: 552.1562719009497 Pearson Correlation: 0.5968130666515657 Spearman Correlation: 0.49525056422149905 Coefficient of Determination: 0.2756634557384122 RMSE: 0.19489881178488838 NRMSE: 0.1229180195414281 MAPE: 457.1019648423456 Predictor: ElasticNet Pearson Correlation: 0.2768091350939819 Spearman Correlation: 0.20450568011624246 Coefficient of Determination: 0.022504817545871636 RMSE: 0.2375877339868813 NRMSE: 0.15179191039399018 MAPE: 630.5615613605629 Pearson Correlation: 0.4227334859097649 Spearman Correlation: 0.33724425479833103 Coefficient of Determination: 0.036129633637327685 RMSE: 0.22482691806145397 NRMSE: 0.14179296043229944 MAPE: 477.88415017465763 Predictor: RandomForests Pearson Correlation: 0.46197344313750055 Spearman Correlation: 0.42009485046560946 Coefficient of Determination: 0.20718233025160238 RMSE: 0.2139702346841979 NRMSE: 0.1367029776543859 MAPE: 501.3862819496525 Pearson Correlation: 0.5239063128183332 Spearman Correlation: 0.4903835937185394 Coefficient of Determination: 0.2548449058810903 RMSE: 0.19767981702468962 NRMSE: 0.12467193303777095 MAPE: 429.79472373158495 Protein: ERBB2 x_train_column_count: 3 x_train columns: ['mRNA_ERBB2', 'DNA_ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 0.8338351332293068 Spearman Correlation: 0.5917403153684603 Coefficient of Determination: 0.6952810294075358 RMSE: 0.5414286843969051 NRMSE: 0.09224128735657786 MAPE: 229.55056699637515 Pearson Correlation: 0.7958879450413265 Spearman Correlation: 0.6696725266810611 Coefficient of Determination: 0.5896100986948779 RMSE: 0.664105696020204 NRMSE: 0.11958542442831491 MAPE: 216.70937790962924 Predictor: ElasticNet Pearson Correlation: 0.8269154360506702 Spearman Correlation: 0.5726286294490728 Coefficient of Determination: 0.4479735351698513 RMSE: 0.7287380794652334 NRMSE: 0.1241525255916373 MAPE: 378.3196692376208 Pearson Correlation: 0.7772612547441716 Spearman Correlation: 0.6602908518700527 Coefficient of Determination: 0.3671647687672507 RMSE: 0.8246775976989834 NRMSE: 0.1484995854249619 MAPE: 127.06327314054302 Predictor: RandomForests Pearson Correlation: 0.843913337833023 Spearman Correlation: 0.6435110242292863 Coefficient of Determination: 0.711152149460804 RMSE: 0.527140136086152 NRMSE: 0.08980699798731655 MAPE: 395.6809024358961 Pearson Correlation: 0.7806416834657331 Spearman Correlation: 0.6801675696846675 Coefficient of Determination: 0.5587921881259992 RMSE: 0.6885896159593243 NRMSE: 0.12399424063804594 MAPE: 220.33738001385248 Protein: ERBB3 x_train_column_count: 3 x_train columns: ['mRNA_ERBB3', 'DNA_ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.4273839429487756 Spearman Correlation: 0.47243121817648176 Coefficient of Determination: 0.18265703469044214 RMSE: 0.43188866805855225 NRMSE: 0.11809303537922619 MAPE: 214.34116729631762 Pearson Correlation: 0.32019154370309544 Spearman Correlation: 0.31849524308283145 Coefficient of Determination: 0.0527945787755727 RMSE: 0.3742912776548627 NRMSE: 0.18422838239225006 MAPE: 195.6197823104818 Predictor: ElasticNet Pearson Correlation: 0.4247436800277297 Spearman Correlation: 0.47559620013365334 Coefficient of Determination: 0.052293998830256094 RMSE: 0.4650572936414082 NRMSE: 0.12716246452642826 MAPE: 228.96221396898238 Pearson Correlation: 0.32037558123944104 Spearman Correlation: 0.3203655905933989 Coefficient of Determination: 0.04457551775447022 RMSE: 0.3759116643926464 NRMSE: 0.18502594633609118 MAPE: 211.72148713759594 Predictor: RandomForests Pearson Correlation: 0.5042835414168672 Spearman Correlation: 0.49668404335424643 Coefficient of Determination: 0.2524446888646191 RMSE: 0.41303923745978793 NRMSE: 0.11293896063912127 MAPE: 238.2738801946076 Pearson Correlation: 0.4100968718338418 Spearman Correlation: 0.31876016630496046 Coefficient of Determination: 0.14491976147444363 RMSE: 0.35562399297314473 NRMSE: 0.17504023437524044 MAPE: 237.49412170542584 Fold: 5 Protein: RB1 x_train_column_count: 3 x_train columns: ['mRNA_RB1', 'DNA_RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.2190586623358844 Spearman Correlation: 0.2755894037576364 Coefficient of Determination: 0.047986697544387114 RMSE: 0.22822390508529145 NRMSE: 0.11274603433665711 MAPE: 185.85319064617295 Pearson Correlation: 0.18067146500968403 Spearman Correlation: 0.28927293357772543 Coefficient of Determination: -0.07080953626950381 RMSE: 0.24873419869260022 NRMSE: 0.12541304413438084 MAPE: 436.7325323189492 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: RandomForests Pearson Correlation: 0.33826488303120156 Spearman Correlation: 0.37607108694056635 Coefficient of Determination: 0.10250391596303887 RMSE: 0.22159293255612864 NRMSE: 0.10947023438844826 MAPE: 204.5001054054449 Pearson Correlation: 0.15641005862700927 Spearman Correlation: 0.252204036253669 Coefficient of Determination: -0.08589886703298832 RMSE: 0.25048058898527914 NRMSE: 0.12629358297464813 MAPE: 581.5404947673852 Protein: CDH1 x_train_column_count: 3 x_train columns: ['mRNA_CDH1', 'DNA_CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.6735195578640034 Spearman Correlation: 0.5938956565556813 Coefficient of Determination: 0.4536285948253226 RMSE: 0.8323585519880814 NRMSE: 0.13253694977677166 MAPE: 248.22327816558683 Pearson Correlation: 0.4913255568640509 Spearman Correlation: 0.5288021047643986 Coefficient of Determination: 0.22622289721992173 RMSE: 1.0219268011867955 NRMSE: 0.20096493700945814 MAPE: 1041.2465023464458 Predictor: ElasticNet Pearson Correlation: 0.6346939283185986 Spearman Correlation: 0.5685694072554455 Coefficient of Determination: 0.3034901253059128 RMSE: 0.9397884515350512 NRMSE: 0.14964307689803685 MAPE: 200.448774911031 Pearson Correlation: 0.4474013149832537 Spearman Correlation: 0.5279093255526878 Coefficient of Determination: 0.16347502541895498 RMSE: 1.0625547272806763 NRMSE: 0.20895453919896884 MAPE: 838.4268368936833 Predictor: RandomForests Pearson Correlation: 0.7548483580674016 Spearman Correlation: 0.613866595045728 Coefficient of Determination: 0.5687638225439651 RMSE: 0.7394759582462089 NRMSE: 0.11774719885452833 MAPE: 166.31570951091769 Pearson Correlation: 0.625082550254143 Spearman Correlation: 0.5457639444172435 Coefficient of Determination: 0.3788042778798629 RMSE: 0.9156427904638805 NRMSE: 0.18006387100821628 MAPE: 646.6200881021399 Protein: CDH2 x_train_column_count: 3 x_train columns: ['mRNA_CDH2', 'DNA_CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.13912072317391377 Spearman Correlation: 0.08279227359449186 Coefficient of Determination: 0.019354575616432612 RMSE: 0.3556439590286937 NRMSE: 0.17466920044629128 MAPE: 197.87389695193923 Pearson Correlation: 0.15929976903227122 Spearman Correlation: -0.11654773319842625 Coefficient of Determination: 0.007222907307674942 RMSE: 0.4155825371916907 NRMSE: 0.15540733960013114 MAPE: 239.39614145628764 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: RandomForests Pearson Correlation: 0.24027895966315904 Spearman Correlation: 0.27727028262882947 Coefficient of Determination: 0.05132125820094857 RMSE: 0.3497993655853751 NRMSE: 0.17179871596943916 MAPE: 655.7086891621036 Pearson Correlation: 0.07942734585840486 Spearman Correlation: 0.02240025938513883 Coefficient of Determination: -0.010870154878050986 RMSE: 0.41935237173052403 NRMSE: 0.15681707149207189 MAPE: 214.59612447119008 Protein: CDH3 x_train_column_count: 3 x_train columns: ['mRNA_CDH3', 'DNA_CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.29263580539856854 Spearman Correlation: 0.335571981284833 Coefficient of Determination: 0.08563571460126862 RMSE: 0.19484764483185588 NRMSE: 0.13670065445351062 MAPE: 335.2606359694758 Pearson Correlation: 0.26293066078536864 Spearman Correlation: 0.2790932555268769 Coefficient of Determination: 0.06488826484608512 RMSE: 0.2160228281451538 NRMSE: 0.19489785016569422 MAPE: 120.89078538044362 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: RandomForests Pearson Correlation: 0.3776676205171769 Spearman Correlation: 0.3815086642738644 Coefficient of Determination: 0.14022652747525033 RMSE: 0.1889415849609979 NRMSE: 0.13255709782861727 MAPE: 416.2007694080388 Pearson Correlation: 0.32426200504019925 Spearman Correlation: 0.2745339663733968 Coefficient of Determination: 0.10164275864888395 RMSE: 0.2117348913223653 NRMSE: 0.19102923278120995 MAPE: 149.5106794723666 Protein: PTEN x_train_column_count: 3 x_train columns: ['mRNA_PTEN', 'DNA_PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 0.41588962419341324 Spearman Correlation: 0.43246741302263064 Coefficient of Determination: 0.17296417951173837 RMSE: 0.5174822683472707 NRMSE: 0.08091349673165049 MAPE: 288.9492532969558 Pearson Correlation: 0.4225473497784461 Spearman Correlation: 0.44997319168568184 Coefficient of Determination: 0.17124904565837962 RMSE: 0.6570092082021319 NRMSE: 0.12709091771164732 MAPE: 265.62288329831637 Predictor: ElasticNet Pearson Correlation: 0.34969281603269364 Spearman Correlation: 0.43317676161675833 Coefficient of Determination: 0.03483595725258082 RMSE: 0.559028410831596 NRMSE: 0.0874096491019617 MAPE: 288.23708504184754 Pearson Correlation: 0.3304061055596864 Spearman Correlation: 0.44860160351126577 Coefficient of Determination: 0.016605948812327354 RMSE: 0.7156871572464426 NRMSE: 0.13844149590808624 MAPE: 391.9706084501819 Predictor: RandomForests Pearson Correlation: 0.4672345651100567 Spearman Correlation: 0.4591334522927066 Coefficient of Determination: 0.2103267758920705 RMSE: 0.5056581592201916 NRMSE: 0.07906467973109087 MAPE: 344.4200544482602 Pearson Correlation: 0.4180885945666071 Spearman Correlation: 0.4547197211225426 Coefficient of Determination: 0.16339310478244984 RMSE: 0.6601158420369176 NRMSE: 0.127691860499249 MAPE: 357.9294599645899 Protein: BRCA2 x_train_column_count: 3 x_train columns: ['mRNA_BRCA2', 'DNA_BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.04260725917967255 Spearman Correlation: 0.04294992568599749 Coefficient of Determination: 0.0018153785348038465 RMSE: 0.20028615534952582 NRMSE: 0.12902957342536694 MAPE: 117.56895811139239 Pearson Correlation: -0.050604514440765934 Spearman Correlation: -0.031663736455566784 Coefficient of Determination: -0.10789089161261689 RMSE: 0.17481777443957053 NRMSE: 0.2286245660623429 MAPE: 113.54419564266125 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: RandomForests Pearson Correlation: 0.31990554275026484 Spearman Correlation: 0.2408185921237684 Coefficient of Determination: 0.05427994866603414 RMSE: 0.19495159434131487 NRMSE: 0.12559290986717017 MAPE: 135.6366360940708 Pearson Correlation: 0.02156709813552516 Spearman Correlation: -0.028856908811311335 Coefficient of Determination: -0.1111945786263715 RMSE: 0.17507823027666236 NRMSE: 0.22896518704853508 MAPE: 120.2039013213722 Protein: CDKN2A x_train_column_count: 3 x_train columns: ['mRNA_CDKN2A', 'DNA_CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 0.5663381500090141 Spearman Correlation: 0.4953005174006369 Coefficient of Determination: 0.32073890015563267 RMSE: 0.5601800434543106 NRMSE: 0.14264471071638377 MAPE: 145.6507074634257 Pearson Correlation: 0.31482309890468774 Spearman Correlation: 0.3271038292248033 Coefficient of Determination: -0.015529015772245192 RMSE: 0.6106362533402362 NRMSE: 0.1536539728089973 MAPE: 285.0993645306472 Predictor: ElasticNet Pearson Correlation: 0.5615667540641955 Spearman Correlation: 0.45191057707338333 Coefficient of Determination: 0.04955800715070069 RMSE: 0.6626314872516976 NRMSE: 0.16873303130852224 MAPE: 264.1582888541679 Pearson Correlation: 0.3189810642972856 Spearman Correlation: 0.3210937792241799 Coefficient of Determination: 0.02844315968901734 RMSE: 0.597269755164641 NRMSE: 0.15029057023342166 MAPE: 271.44843819903843 Predictor: RandomForests Pearson Correlation: 0.6814633627661284 Spearman Correlation: 0.5582440271028338 Coefficient of Determination: 0.4638574879258852 RMSE: 0.49767907755264007 NRMSE: 0.1267294129389728 MAPE: 263.893146083864 Pearson Correlation: 0.37613355440235063 Spearman Correlation: 0.3125182383039447 Coefficient of Determination: -0.05482359828038019 RMSE: 0.6223380216816197 NRMSE: 0.1565984805821745 MAPE: 486.48465458979456 Protein: TP53 x_train_column_count: 3 x_train columns: ['mRNA_TP53', 'DNA_TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.5104700586699071 Spearman Correlation: 0.4320690064792694 Coefficient of Determination: 0.2605796807984586 RMSE: 0.3644176491006784 NRMSE: 0.09268232892511978 MAPE: 770.8957367155473 Pearson Correlation: 0.5225931726361469 Spearman Correlation: 0.4473197920173569 Coefficient of Determination: 0.2509176250319346 RMSE: 0.4571077789802278 NRMSE: 0.12243411784658573 MAPE: 195.96963234825682 Predictor: ElasticNet Pearson Correlation: 0.4130677360219776 Spearman Correlation: 0.42206730689390887 Coefficient of Determination: 0.13566044112480802 RMSE: 0.3939997141985829 NRMSE: 0.10020593458597189 MAPE: 639.6139187601407 Pearson Correlation: 0.43444699491224426 Spearman Correlation: 0.4026459182782828 Coefficient of Determination: 0.1211659925926244 RMSE: 0.49511632911090997 NRMSE: 0.13261452500627025 MAPE: 164.29007359790015 Predictor: RandomForests Pearson Correlation: 0.5602481481612476 Spearman Correlation: 0.49450872224317843 Coefficient of Determination: 0.3035120007232104 RMSE: 0.3536800233902058 NRMSE: 0.08995142892499958 MAPE: 742.620220819138 Pearson Correlation: 0.548057323604883 Spearman Correlation: 0.43321619764195557 Coefficient of Determination: 0.2707383016775887 RMSE: 0.45101971373300986 NRMSE: 0.12080345888121331 MAPE: 191.29685249447965 Protein: CTNNB1 x_train_column_count: 3 x_train columns: ['mRNA_CTNNB1', 'DNA_CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.060176286960694145 Spearman Correlation: 0.09588678934493636 Coefficient of Determination: 0.0036211855123756687 RMSE: 0.7546107795334123 NRMSE: 0.14842855616314168 MAPE: 672.4011431137344 Pearson Correlation: 0.18479039626231866 Spearman Correlation: 0.19979550867217796 Coefficient of Determination: 0.019970024413197285 RMSE: 0.670857187774057 NRMSE: 0.21485374593630424 MAPE: 275.9727827085837 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: RandomForests Pearson Correlation: 0.3570069427734524 Spearman Correlation: 0.31803771508088474 Coefficient of Determination: 0.06477007630297538 RMSE: 0.7310885116211374 NRMSE: 0.1438018315541183 MAPE: 713.117856559522 Pearson Correlation: 0.21057720981222589 Spearman Correlation: 0.21865706367907853 Coefficient of Determination: 0.03144013921473243 RMSE: 0.6669198304573508 NRMSE: 0.21359273840146514 MAPE: 269.1259603565269 Protein: CCNE1 x_train_column_count: 3 x_train columns: ['mRNA_CCNE1', 'DNA_CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.7402320361625657 Spearman Correlation: 0.6962274058400395 Coefficient of Determination: 0.5479434673613781 RMSE: 0.30174670538378123 NRMSE: 0.10747879087579028 MAPE: 67.51177875578313 Pearson Correlation: 0.7813352619397866 Spearman Correlation: 0.7154378483522239 Coefficient of Determination: 0.20727363047731684 RMSE: 0.577033546398427 NRMSE: 0.13925562815802953 MAPE: 90.85381339003568 Predictor: ElasticNet Pearson Correlation: 0.49178746850742866 Spearman Correlation: 0.3371754007607795 Coefficient of Determination: 0.03866151385181349 RMSE: 0.4400320672369793 NRMSE: 0.15673448521352779 MAPE: 110.89298473458975 Pearson Correlation: 0.7296327274821778 Spearman Correlation: 0.3833389443758651 Coefficient of Determination: 0.0479700581167577 RMSE: 0.632360469518605 NRMSE: 0.15260768625108118 MAPE: 115.13148147709104 Predictor: RandomForests Pearson Correlation: 0.8555901031193875 Spearman Correlation: 0.7115030650421984 Coefficient of Determination: 0.7305818210907354 RMSE: 0.23294833479894259 NRMSE: 0.08297358318751294 MAPE: 56.52821427527183 Pearson Correlation: 0.7984648767099046 Spearman Correlation: 0.7309889859775095 Coefficient of Determination: 0.6102477638034867 RMSE: 0.40460730300332876 NRMSE: 0.09764396626283968 MAPE: 78.44368259757474 Protein: CCND1 x_train_column_count: 3 x_train columns: ['mRNA_CCND1', 'DNA_CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.42649023127035884 Spearman Correlation: 0.4082172466956049 Coefficient of Determination: 0.18189391736904414 RMSE: 0.2058793936818677 NRMSE: 0.1296731039515946 MAPE: 597.3773050657829 Pearson Correlation: 0.35668852865577205 Spearman Correlation: 0.26432997917679774 Coefficient of Determination: 0.12597206418327112 RMSE: 0.25799253018654944 NRMSE: 0.1648282862387073 MAPE: 243.54708460171096 Predictor: ElasticNet Pearson Correlation: 0.32122548546276963 Spearman Correlation: 0.2439027516652583 Coefficient of Determination: 0.035300654102211726 RMSE: 0.22356512755491487 NRMSE: 0.14081246066897288 MAPE: 686.8371110763705 Pearson Correlation: 0.25020170615870674 Spearman Correlation: 0.16419915591178877 Coefficient of Determination: 0.01881881925225304 RMSE: 0.2733500009345617 NRMSE: 0.17463998730821334 MAPE: 265.86561183171807 Predictor: RandomForests Pearson Correlation: 0.49268066932663374 Spearman Correlation: 0.44978518155098807 Coefficient of Determination: 0.23905745780751642 RMSE: 0.19855645127304497 NRMSE: 0.1250607498192614 MAPE: 545.558550562691 Pearson Correlation: 0.3912694969552766 Spearman Correlation: 0.3008115144081272 Coefficient of Determination: 0.15006617485900264 RMSE: 0.25441167161808803 NRMSE: 0.16254051929957963 MAPE: 251.77277359936053 Protein: ERBB2 x_train_column_count: 3 x_train columns: ['mRNA_ERBB2', 'DNA_ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.8292610082637566 Spearman Correlation: 0.6311411442698738 Coefficient of Determination: 0.6876738198266225 RMSE: 0.5744651033365087 NRMSE: 0.0978695850446375 MAPE: 257.5384239312277 Pearson Correlation: 0.7904280538861863 Spearman Correlation: 0.5733662514495194 Coefficient of Determination: 0.6210022786475173 RMSE: 0.5341928207154008 NRMSE: 0.11819732729624975 MAPE: 299.5227220754971 Predictor: ElasticNet Pearson Correlation: 0.8172016863676859 Spearman Correlation: 0.6133823453030491 Coefficient of Determination: 0.46325637630353667 RMSE: 0.7530831042310248 NRMSE: 0.12830010123703509 MAPE: 410.01319855294946 Pearson Correlation: 0.806083017782779 Spearman Correlation: 0.5450117831893166 Coefficient of Determination: 0.40851137844840946 RMSE: 0.6673488937093945 NRMSE: 0.14765989461431453 MAPE: 448.8550867853168 Predictor: RandomForests Pearson Correlation: 0.8422875254197999 Spearman Correlation: 0.6641902978837151 Coefficient of Determination: 0.707966488581793 RMSE: 0.5554894337190149 NRMSE: 0.0946367674189507 MAPE: 525.5259546001823 Pearson Correlation: 0.7770231374392905 Spearman Correlation: 0.6032940377474442 Coefficient of Determination: 0.5990953212604824 RMSE: 0.5494147440549729 NRMSE: 0.12156538202344794 MAPE: 247.3352776119546 Protein: ERBB3 x_train_column_count: 3 x_train columns: ['mRNA_ERBB3', 'DNA_ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.38154908017461076 Spearman Correlation: 0.4097841038722461 Coefficient of Determination: 0.14557970058209146 RMSE: 0.43343648776968763 NRMSE: 0.1169720677187206 MAPE: 211.96323829140366 Pearson Correlation: 0.5134907213506094 Spearman Correlation: 0.5530268457212684 Coefficient of Determination: 0.22428240688006973 RMSE: 0.3672451402059172 NRMSE: 0.1776843588308322 MAPE: 191.81520589969216 Predictor: ElasticNet Pearson Correlation: 0.3773884363248901 Spearman Correlation: 0.41142820549776254 Coefficient of Determination: 0.04050378060667925 RMSE: 0.4593157350355365 NRMSE: 0.12395613377939546 MAPE: 241.4756185728408 Pearson Correlation: 0.5207896565156246 Spearman Correlation: 0.5619845633985462 Coefficient of Determination: 0.008092447027275074 RMSE: 0.4152788712398118 NRMSE: 0.2009245375741769 MAPE: 230.8356588688801 Predictor: RandomForests Pearson Correlation: 0.46486685418215473 Spearman Correlation: 0.437387903066299 Coefficient of Determination: 0.21474829969107045 RMSE: 0.41552210494535907 NRMSE: 0.11213748996628203 MAPE: 251.59688507859425 Pearson Correlation: 0.5424618846414083 Spearman Correlation: 0.5501866300948342 Coefficient of Determination: 0.26533840065127934 RMSE: 0.35739453453943376 NRMSE: 0.17291833646505475 MAPE: 217.8774055862619
TMM
scenario = Scenario.selfmRNA_CNA_Mutations
normalizeTechnique = NormalizeTechnique.TMM
X, Y, Z = get_mRNA_DNA_data(normalizeTechnique)
X.head()
| mRNA_RB1 | DNA_RB1 | mRNA_CDH1 | DNA_CDH1 | mRNA_PTEN | DNA_PTEN | mRNA_BRCA2 | DNA_BRCA2 | mRNA_CDKN2A | DNA_CDKN2A | ... | mRNA_CCND1 | DNA_CCND1 | mRNA_CDH2 | DNA_CDH2 | mRNA_CDH3 | DNA_CDH3 | mRNA_ERBB2 | DNA_ERBB2 | mRNA_ERBB3 | DNA_ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 16.447411 | 14.862449 | 16.447411 | 14.862449 | 16.447411 | 16.447411 | 16.447411 | 14.862449 | 16.447411 | 14.862449 | ... | 16.447411 | 14.862449 | 16.447411 | 14.862449 | 16.447411 | 14.862449 | 16.447411 | 14.862449 | 16.447411 | 16.447411 |
| TCGA-A1-A0SH-01 | 16.447411 | 14.862449 | 16.447411 | 14.862449 | 16.447411 | 14.862449 | 16.447411 | 14.862449 | 16.447411 | 14.862449 | ... | 16.447411 | 14.862449 | 16.447411 | 14.862449 | 16.447411 | 14.862449 | 16.447411 | 16.447411 | 16.447411 | 14.862449 |
| TCGA-A1-A0SJ-01 | 16.447411 | 14.862449 | 16.447411 | 16.447411 | 16.447411 | 14.862449 | 16.447411 | 16.447411 | 16.447411 | 14.862449 | ... | 16.447411 | 16.447411 | 16.447411 | 16.447411 | 16.447411 | 16.447411 | 16.447411 | 16.447411 | 16.447411 | 14.862449 |
| TCGA-A1-A0SK-01 | 16.447411 | 14.862449 | 16.447411 | 14.862449 | 16.447411 | 14.862449 | 16.447411 | 16.447411 | 16.447411 | 16.447411 | ... | 16.447411 | 16.447411 | 16.447411 | 16.447411 | 16.447411 | 14.862449 | 16.447411 | 14.862449 | 16.447411 | 16.447411 |
| TCGA-A1-A0SQ-01 | 16.447411 | 14.862449 | 16.447411 | 14.862449 | 16.447411 | 14.862449 | 16.447411 | 14.862449 | 16.447411 | 14.862449 | ... | 16.447411 | 16.447411 | 16.447411 | 14.862449 | 16.447411 | 14.862449 | 16.447411 | 14.862449 | 16.447411 | 14.862449 |
5 rows × 26 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 3 x_train columns: ['mRNA_RB1', 'DNA_RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.05565908773883884 Spearman Correlation: 0.0290520270154677 Coefficient of Determination: 0.0030979340479198036 RMSE: 0.22375453703839973 NRMSE: 0.08473945731429643 MAPE: 227.32397228735536 Pearson Correlation: -0.01705285334223853 Spearman Correlation: -0.10491522872955537 Coefficient of Determination: -0.03225916155604436 RMSE: 0.28495414741256736 NRMSE: 0.14077162546378985 MAPE: 140.23193662850912 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: RandomForests Pearson Correlation: 0.05574453203547191 Spearman Correlation: 0.0290520270154677 Coefficient of Determination: 0.0031017220138325197 RMSE: 0.22375411193377148 NRMSE: 0.08473929632030731 MAPE: 226.82066038562655 Pearson Correlation: -0.017052853342238525 Spearman Correlation: -0.10491522872955537 Coefficient of Determination: -0.03239635654870665 RMSE: 0.28497308305621416 NRMSE: 0.14078097995594085 MAPE: 142.81588160931915 Protein: CDH1 x_train_column_count: 3 x_train columns: ['mRNA_CDH1', 'DNA_CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 0.5421539823792003 Spearman Correlation: 0.3824266873647208 Coefficient of Determination: 0.29393094060962666 RMSE: 0.9481974691714785 NRMSE: 0.15937966973786472 MAPE: 309.92611155945104 Pearson Correlation: 0.6037076833990531 Spearman Correlation: 0.44538605108593016 Coefficient of Determination: 0.36211880658217066 RMSE: 0.9267064372486582 NRMSE: 0.15009336225724113 MAPE: 171.5008771217634 Predictor: ElasticNet Pearson Correlation: 0.5372560728262117 Spearman Correlation: 0.3824266873647208 Coefficient of Determination: 0.22899219893830214 RMSE: 0.9908424114090906 NRMSE: 0.16654773022189007 MAPE: 371.9338647049103 Pearson Correlation: 0.6014002450807441 Spearman Correlation: 0.44538605108593016 Coefficient of Determination: 0.2721537316456951 RMSE: 0.98990179240941 NRMSE: 0.160328753912962 MAPE: 185.10094867913082 Predictor: RandomForests Pearson Correlation: 0.5430917921478581 Spearman Correlation: 0.3824266873647208 Coefficient of Determination: 0.2949362850449885 RMSE: 0.9475221778471531 NRMSE: 0.1592661620437956 MAPE: 307.53112390472194 Pearson Correlation: 0.603563383804422 Spearman Correlation: 0.44538605108593016 Coefficient of Determination: 0.3624188055973012 RMSE: 0.9264884940669392 NRMSE: 0.15005806324170567 MAPE: 169.9305228573047 Protein: CDH2 x_train_column_count: 3 x_train columns: ['mRNA_CDH2', 'DNA_CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.008767173186598738 Spearman Correlation: 0.019962378842654085 Coefficient of Determination: 7.686332568390686e-05 RMSE: 0.37118019672750757 NRMSE: 0.13712523938257382 MAPE: 483.4208925009799 Pearson Correlation: -0.03575771332209221 Spearman Correlation: -0.055788518235503425 Coefficient of Determination: -0.0009217133361154595 RMSE: 0.3752878247873199 NRMSE: 0.19367694936642407 MAPE: 105.02093571876571 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: RandomForests Pearson Correlation: 0.008767173186598736 Spearman Correlation: 0.019962378842654085 Coefficient of Determination: 3.0146686855192506e-05 RMSE: 0.37118886743829727 NRMSE: 0.13712844260651502 MAPE: 450.31491690678695 Pearson Correlation: -0.035757713322092204 Spearman Correlation: -0.055788518235503425 Coefficient of Determination: -0.0005413459990653013 RMSE: 0.37521651012164076 NRMSE: 0.19364014559614015 MAPE: 104.86475989199135 Protein: CDH3 x_train_column_count: 3 x_train columns: ['mRNA_CDH3', 'DNA_CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.02448976895920517 Spearman Correlation: 0.018135251556805343 Coefficient of Determination: 0.0005997487836750803 RMSE: 0.20873714956157927 NRMSE: 0.14644521353312795 MAPE: 113.75237697631371 Pearson Correlation: 0.10713101921352154 Spearman Correlation: 0.09807273868457626 Coefficient of Determination: 0.001081417533861928 RMSE: 0.20446867779084282 NRMSE: 0.15649989498040032 MAPE: 108.28156815658994 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: RandomForests Pearson Correlation: 0.0244847848620888 Spearman Correlation: 0.018135251556805343 Coefficient of Determination: 0.0005785290270081678 RMSE: 0.20873936555462327 NRMSE: 0.14644676822320205 MAPE: 117.97896797249447 Pearson Correlation: 0.10713101921352161 Spearman Correlation: 0.09807273868457626 Coefficient of Determination: 0.001197132652762778 RMSE: 0.2044568345820887 NRMSE: 0.15649083021338425 MAPE: 111.42357479054921 Protein: PTEN x_train_column_count: 3 x_train columns: ['mRNA_PTEN', 'DNA_PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 0.22018841468420156 Spearman Correlation: 0.19532003549885615 Coefficient of Determination: 0.048482937961142 RMSE: 0.6110987948204901 NRMSE: 0.09555137124861075 MAPE: 395.73203953233195 Pearson Correlation: -0.009555372271907748 Spearman Correlation: 0.08341883349362084 Coefficient of Determination: -0.09319677158171324 RMSE: 0.5192947096453858 NRMSE: 0.17114715893658486 MAPE: 169.6484722942428 Predictor: ElasticNet Pearson Correlation: 0.19754747847059254 Spearman Correlation: 0.19532003549885615 Coefficient of Determination: 0.025070716576042207 RMSE: 0.6185711984204071 NRMSE: 0.09671975583150763 MAPE: 354.59670270489505 Pearson Correlation: -0.007914129280822838 Spearman Correlation: 0.08341883349362084 Coefficient of Determination: -0.021831296998176875 RMSE: 0.5020585045078452 NRMSE: 0.16546651654730907 MAPE: 155.77914251354926 Predictor: RandomForests Pearson Correlation: 0.2219849636292646 Spearman Correlation: 0.19532003549885615 Coefficient of Determination: 0.04924237721216085 RMSE: 0.6108548764144782 NRMSE: 0.09551323218113958 MAPE: 403.9634816202716 Pearson Correlation: -0.009689557229617403 Spearman Correlation: 0.08341883349362084 Coefficient of Determination: -0.09531243858207006 RMSE: 0.5197969630665069 NRMSE: 0.17131268969300206 MAPE: 174.00380021683623 Protein: BRCA2 x_train_column_count: 3 x_train columns: ['mRNA_BRCA2', 'DNA_BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.050852864010493576 Spearman Correlation: 0.05012855621706846 Coefficient of Determination: 0.0025860137780697734 RMSE: 0.19735554877082873 NRMSE: 0.12766715535095594 MAPE: 116.16648705038044 Pearson Correlation: 0.07488741540841586 Spearman Correlation: 0.04723406854257298 Coefficient of Determination: 0.0009393532223824774 RMSE: 0.1846478809185009 NRMSE: 0.18479571749249493 MAPE: 102.6445671094623 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: RandomForests Pearson Correlation: 0.0507360210488839 Spearman Correlation: 0.05012855621706846 Coefficient of Determination: 0.002557829073076001 RMSE: 0.19735833716597007 NRMSE: 0.12766895913340798 MAPE: 114.81264531294377 Pearson Correlation: 0.08117641572016795 Spearman Correlation: 0.04723406854257298 Coefficient of Determination: 0.0021091230046307308 RMSE: 0.18453974995826342 NRMSE: 0.18468749995823003 MAPE: 102.46819066709611 Protein: CDKN2A x_train_column_count: 3 x_train columns: ['mRNA_CDKN2A', 'DNA_CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 0.22575738643632215 Spearman Correlation: 0.19982681795280655 Coefficient of Determination: 0.05096639753055887 RMSE: 0.6261221286887284 NRMSE: 0.1415445074463046 MAPE: 215.21247790157116 Pearson Correlation: 0.29497770984372373 Spearman Correlation: 0.26663875002652054 Coefficient of Determination: 0.07644056370086783 RMSE: 0.7177521078032126 NRMSE: 0.193829896787257 MAPE: 322.4039959886185 Predictor: ElasticNet Pearson Correlation: 0.22511728287931887 Spearman Correlation: 0.20173569668455615 Coefficient of Determination: 0.04620077892494312 RMSE: 0.6276922115261697 NRMSE: 0.1418994487456018 MAPE: 217.7609197308502 Pearson Correlation: 0.2949777098437238 Spearman Correlation: 0.26663875002652054 Coefficient of Determination: 0.06055582504081081 RMSE: 0.7238982729594668 NRMSE: 0.1954896767376362 MAPE: 356.09990138436825 Predictor: RandomForests Pearson Correlation: 0.22702932003117926 Spearman Correlation: 0.20275939625788061 Coefficient of Determination: 0.05153838108822606 RMSE: 0.6259334180152575 NRMSE: 0.14150184650508815 MAPE: 211.21831184293777 Pearson Correlation: 0.29497770984372373 Spearman Correlation: 0.26663875002652054 Coefficient of Determination: 0.0770273473096007 RMSE: 0.7175240596270298 NRMSE: 0.193768312078593 MAPE: 319.4976473020822 Protein: TP53 x_train_column_count: 3 x_train columns: ['mRNA_TP53', 'DNA_TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.33988644616041025 Spearman Correlation: 0.352687528156573 Coefficient of Determination: 0.11552279628355322 RMSE: 0.4258616281720061 NRMSE: 0.10234598129584382 MAPE: 670.454883158564 Pearson Correlation: 0.45833409920482265 Spearman Correlation: 0.43869172117558014 Coefficient of Determination: 0.20066393268855887 RMSE: 0.37607354390314146 NRMSE: 0.1352344722583126 MAPE: 799.1418312054203 Predictor: ElasticNet Pearson Correlation: 0.33988642205961633 Spearman Correlation: 0.35768121059759544 Coefficient of Determination: 0.09893660318689301 RMSE: 0.4298360753283805 NRMSE: 0.10330114763960119 MAPE: 524.1362203914554 Pearson Correlation: 0.4583599002736805 Spearman Correlation: 0.4892664465658411 Coefficient of Determination: 0.15581916725222322 RMSE: 0.3864789294961421 NRMSE: 0.13897620536378227 MAPE: 643.5332568414525 Predictor: RandomForests Pearson Correlation: 0.34911321012189017 Spearman Correlation: 0.3618913610246525 Coefficient of Determination: 0.12187638845794568 RMSE: 0.4243292948451062 NRMSE: 0.1019777204626547 MAPE: 645.9292318061747 Pearson Correlation: 0.4423350714963895 Spearman Correlation: 0.4399129417601711 Coefficient of Determination: 0.18886609943816723 RMSE: 0.37883871451050655 NRMSE: 0.13622881603455952 MAPE: 780.6131053200935 Protein: CTNNB1 x_train_column_count: 3 x_train columns: ['mRNA_CTNNB1', 'DNA_CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 0.023008730595921165 Spearman Correlation: 0.01723287661106173 Coefficient of Determination: 0.0005294016836354665 RMSE: 0.7370399934968188 NRMSE: 0.14854585998686315 MAPE: 671.4614446269538 Pearson Correlation: 0.1390198403170291 Spearman Correlation: 0.1578603975618046 Coefficient of Determination: -0.010714657909208114 RMSE: 0.7549701755611307 NRMSE: 0.18730962525706613 MAPE: 321.8883515026002 Predictor: ElasticNet Pearson Correlation: 0.023008730595921185 Spearman Correlation: 0.01723287661106173 Coefficient of Determination: 6.322530947222571e-05 RMSE: 0.7372118597713406 NRMSE: 0.14858049857333994 MAPE: 664.770778748126 Pearson Correlation: 0.13901984031702916 Spearman Correlation: 0.1578603975618046 Coefficient of Determination: -0.016250201258388497 RMSE: 0.7570347857529087 NRMSE: 0.18782185921523067 MAPE: 326.1001719709614 Predictor: RandomForests Pearson Correlation: 0.023008730595921192 Spearman Correlation: 0.01723287661106173 Coefficient of Determination: 0.0005091404429777846 RMSE: 0.737047464086262 NRMSE: 0.1485473656380398 MAPE: 668.1331212623272 Pearson Correlation: 0.1390198403170292 Spearman Correlation: 0.1578603975618046 Coefficient of Determination: -0.011296637397899545 RMSE: 0.7551875039248228 NRMSE: 0.18736354486300374 MAPE: 319.7227803208633 Protein: CCNE1 x_train_column_count: 3 x_train columns: ['mRNA_CCNE1', 'DNA_CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.2937844352239085 Spearman Correlation: 0.28243119573015973 Coefficient of Determination: 0.0863092943798307 RMSE: 0.4623275739522736 NRMSE: 0.1115736114951067 MAPE: 115.05553483119793 Pearson Correlation: 0.42754059762419894 Spearman Correlation: 0.33988616453265663 Coefficient of Determination: 0.1508127251106901 RMSE: 0.49488966986085575 NRMSE: 0.17627414776878209 MAPE: 75.87845759058824 Predictor: ElasticNet Pearson Correlation: 0.29376121035375635 Spearman Correlation: 0.28170681293654287 Coefficient of Determination: 0.08241807360608056 RMSE: 0.4633110070244447 NRMSE: 0.11181094360702867 MAPE: 115.64493063564339 Pearson Correlation: 0.427540597624199 Spearman Correlation: 0.33988616453265663 Coefficient of Determination: 0.12898596295783327 RMSE: 0.50120942237324 NRMSE: 0.1785251727064078 MAPE: 77.33569648786853 Predictor: RandomForests Pearson Correlation: 0.29378134517001847 Spearman Correlation: 0.28243119573015973 Coefficient of Determination: 0.0863018110557272 RMSE: 0.46232946722971013 NRMSE: 0.11157406840015208 MAPE: 114.95364678746098 Pearson Correlation: 0.427540597624199 Spearman Correlation: 0.33988616453265663 Coefficient of Determination: 0.15156325169222618 RMSE: 0.494670925440137 NRMSE: 0.1761962334604228 MAPE: 75.79679029655577 Protein: CCND1 x_train_column_count: 3 x_train columns: ['mRNA_CCND1', 'DNA_CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 0.12344463626324008 Spearman Correlation: 0.13874125040194865 Coefficient of Determination: 0.015238578222163568 RMSE: 0.23706681633954815 NRMSE: 0.14251771431120713 MAPE: 386.0005864379153 Pearson Correlation: 0.17152056560275897 Spearman Correlation: 0.1596416727279327 Coefficient of Determination: 0.026301657440094384 RMSE: 0.23183697993126046 NRMSE: 0.1651166457262125 MAPE: 1464.2678588761635 Predictor: ElasticNet Pearson Correlation: 0.11634825741497637 Spearman Correlation: 0.13320522048256464 Coefficient of Determination: 0.009800651314684106 RMSE: 0.23772046563429272 NRMSE: 0.14291066936449767 MAPE: 397.85026564980006 Pearson Correlation: 0.1715205656027589 Spearman Correlation: 0.1596416727279327 Coefficient of Determination: 0.015622319481023328 RMSE: 0.23310488479580369 NRMSE: 0.16601966041522112 MAPE: 1388.461175219547 Predictor: RandomForests Pearson Correlation: 0.12223862904092271 Spearman Correlation: 0.13874125040194865 Coefficient of Determination: 0.014856742371822551 RMSE: 0.23711277256528265 NRMSE: 0.14254534186512285 MAPE: 383.14752094925495 Pearson Correlation: 0.17152056560275894 Spearman Correlation: 0.1596416727279327 Coefficient of Determination: 0.025638954095136723 RMSE: 0.2319158611424095 NRMSE: 0.16517282572389713 MAPE: 1448.483073575677 Protein: ERBB2 x_train_column_count: 3 x_train columns: ['mRNA_ERBB2', 'DNA_ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 0.49303620483526583 Spearman Correlation: 0.4729449113363833 Coefficient of Determination: 0.24308469927836207 RMSE: 0.8866582234625696 NRMSE: 0.15105682121106184 MAPE: 1204.258514249366 Pearson Correlation: 0.4043906523377864 Spearman Correlation: 0.33846911258112966 Coefficient of Determination: 0.12836417938082223 RMSE: 0.8468260453984381 NRMSE: 0.15702318661198555 MAPE: 1099.473095840766 Predictor: ElasticNet Pearson Correlation: 0.49129354234286826 Spearman Correlation: 0.4750965163068455 Coefficient of Determination: 0.23580270578534068 RMSE: 0.8909131146276428 NRMSE: 0.15178171194910178 MAPE: 1064.9024065945814 Pearson Correlation: 0.4116548657620299 Spearman Correlation: 0.3583358290653686 Coefficient of Determination: 0.15051155648890435 RMSE: 0.8359983295315341 NRMSE: 0.1550154514243527 MAPE: 979.1772757751746 Predictor: RandomForests Pearson Correlation: 0.49308846439425774 Spearman Correlation: 0.4729449113363833 Coefficient of Determination: 0.2431275393357789 RMSE: 0.8866331314696844 NRMSE: 0.1510525463771035 MAPE: 1208.0864035302893 Pearson Correlation: 0.4053812840357547 Spearman Correlation: 0.33846911258112966 Coefficient of Determination: 0.12820403813246262 RMSE: 0.8469038333625172 NRMSE: 0.15703761048813594 MAPE: 1102.9249263176673 Protein: ERBB3 x_train_column_count: 3 x_train columns: ['mRNA_ERBB3', 'DNA_ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.09200172269990915 Spearman Correlation: 0.08359948366563259 Coefficient of Determination: 0.008464316979750919 RMSE: 0.4571908524892114 NRMSE: 0.12338268896771837 MAPE: 213.65110160940608 Pearson Correlation: 0.16925042802623355 Spearman Correlation: 0.1777241679068565 Coefficient of Determination: 0.015685133518155592 RMSE: 0.46185378538756594 NRMSE: 0.18532268609863167 MAPE: 247.2117710663289 Predictor: ElasticNet Pearson Correlation: 0.08560689249509452 Spearman Correlation: 0.09292830377635566 Coefficient of Determination: 0.005799732690677684 RMSE: 0.4578047518369455 NRMSE: 0.12354836278176466 MAPE: 214.45443035979275 Pearson Correlation: 0.1909567320896863 Spearman Correlation: 0.2192151816111248 Coefficient of Determination: 0.008892897079896489 RMSE: 0.46344455023285364 NRMSE: 0.18596099376960293 MAPE: 249.42641680282117 Predictor: RandomForests Pearson Correlation: 0.11543866882563378 Spearman Correlation: 0.10511209559056207 Coefficient of Determination: 0.01332041818641816 RMSE: 0.4560699195207517 NRMSE: 0.12308018133212567 MAPE: 215.2039357415657 Pearson Correlation: 0.16495698442557763 Spearman Correlation: 0.21658037382537737 Coefficient of Determination: 0.01618852348931965 RMSE: 0.46173567160910245 NRMSE: 0.1852752919592251 MAPE: 249.25610265732328 Fold: 2 Protein: RB1 x_train_column_count: 3 x_train columns: ['mRNA_RB1', 'DNA_RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.07754413515463285 Spearman Correlation: 0.08800283820494499 Coefficient of Determination: 0.006013092896880012 RMSE: 0.23433341028198143 NRMSE: 0.08569829223302422 MAPE: 184.46279351929357 Pearson Correlation: -0.0364558578744204 Spearman Correlation: -0.013189651705656323 Coefficient of Determination: -0.03376688996320887 RMSE: 0.24900453310914622 NRMSE: 0.14266167060601243 MAPE: 232.61514909709427 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: RandomForests Pearson Correlation: 0.07723226493097127 Spearman Correlation: 0.08800283820494499 Coefficient of Determination: 0.005959247251073774 RMSE: 0.2343397572785282 NRMSE: 0.08570061339911067 MAPE: 182.36042955483782 Pearson Correlation: -0.028790087388615916 Spearman Correlation: -0.013189651705656323 Coefficient of Determination: -0.03255894151513061 RMSE: 0.24885901067089308 NRMSE: 0.1425782967256552 MAPE: 228.3846245329626 Protein: CDH1 x_train_column_count: 3 x_train columns: ['mRNA_CDH1', 'DNA_CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.5588203030914405 Spearman Correlation: 0.37603767393504994 Coefficient of Determination: 0.31228013114720876 RMSE: 0.929298786766722 NRMSE: 0.1490813807277969 MAPE: 267.0048671992245 Pearson Correlation: 0.5333191007361088 Spearman Correlation: 0.46445665224657906 Coefficient of Determination: 0.2351375719391784 RMSE: 1.0062909191990208 NRMSE: 0.1787055441660488 MAPE: 215.79480866975894 Predictor: ElasticNet Pearson Correlation: 0.5523185437323851 Spearman Correlation: 0.37603767393504994 Coefficient of Determination: 0.23614117293683234 RMSE: 0.979391059405565 NRMSE: 0.1571173593335309 MAPE: 316.28529829321093 Pearson Correlation: 0.5355344520041184 Spearman Correlation: 0.46445665224657906 Coefficient of Determination: 0.1998169499391813 RMSE: 1.029263479976255 NRMSE: 0.18278520333444415 MAPE: 202.83203118234212 Predictor: RandomForests Pearson Correlation: 0.5599079690039871 Spearman Correlation: 0.37603767393504994 Coefficient of Determination: 0.3134693578911174 RMSE: 0.9284949528238626 NRMSE: 0.14895242685872506 MAPE: 262.28334129985853 Pearson Correlation: 0.5329764748526497 Spearman Correlation: 0.46445665224657906 Coefficient of Determination: 0.23242981916692473 RMSE: 1.008070572391892 NRMSE: 0.17902158984050645 MAPE: 215.79131482336226 Protein: CDH2 x_train_column_count: 3 x_train columns: ['mRNA_CDH2', 'DNA_CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.01329108122736428 Spearman Correlation: 0.016005329532153372 Coefficient of Determination: 0.00017665284019252603 RMSE: 0.3680657719356009 NRMSE: 0.13336682800768207 MAPE: 417.60958254401004 Pearson Correlation: -0.051401849271377406 Spearman Correlation: -0.08101032092498056 Coefficient of Determination: -0.0016440562046584617 RMSE: 0.38739843763738124 NRMSE: 0.20409048590873383 MAPE: 133.5103209218184 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: RandomForests Pearson Correlation: 0.013281603733243856 Spearman Correlation: 0.016005329532153372 Coefficient of Determination: 0.0001656336137423331 RMSE: 0.36806780018835483 NRMSE: 0.13336756293512386 MAPE: 397.8396810374305 Pearson Correlation: -0.05140184927137742 Spearman Correlation: -0.08101032092498056 Coefficient of Determination: -0.0018217800505750947 RMSE: 0.3874328045794279 NRMSE: 0.20410859121123395 MAPE: 131.0459130507187 Protein: CDH3 x_train_column_count: 3 x_train columns: ['mRNA_CDH3', 'DNA_CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.08376429388035413 Spearman Correlation: 0.08833833163888308 Coefficient of Determination: 0.007016456929274439 RMSE: 0.20697674132443963 NRMSE: 0.15577035313753704 MAPE: 158.18807459510137 Pearson Correlation: -0.2144992063261693 Spearman Correlation: -0.21494832592732932 Coefficient of Determination: -0.18866009074481527 RMSE: 0.2157918164817336 NRMSE: 0.17756259070331082 MAPE: 356.4273821653952 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: RandomForests Pearson Correlation: 0.08375836055679031 Spearman Correlation: 0.08833833163888308 Coefficient of Determination: 0.0070039566983934876 RMSE: 0.20697804408969148 NRMSE: 0.15577133359651055 MAPE: 157.1826004778751 Pearson Correlation: -0.21571730224516358 Spearman Correlation: -0.21494832592732932 Coefficient of Determination: -0.18700290622160254 RMSE: 0.2156413396596745 NRMSE: 0.17743877203955774 MAPE: 349.3049734597033 Protein: PTEN x_train_column_count: 3 x_train columns: ['mRNA_PTEN', 'DNA_PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.17455768103525973 Spearman Correlation: 0.1650353234332369 Coefficient of Determination: 0.030470384008407625 RMSE: 0.6141731621646535 NRMSE: 0.09603207914387514 MAPE: 287.2605995742736 Pearson Correlation: 0.21537189355547487 Spearman Correlation: 0.18853517257800473 Coefficient of Determination: 0.04473078702482003 RMSE: 0.5000564494467389 NRMSE: 0.16771412981175843 MAPE: 474.929196799959 Predictor: ElasticNet Pearson Correlation: 0.14552126498735546 Spearman Correlation: 0.14972232703837604 Coefficient of Determination: 0.013244575599775099 RMSE: 0.6196052033234354 NRMSE: 0.0968814327767079 MAPE: 262.7773190579957 Pearson Correlation: 0.18603868090347514 Spearman Correlation: 0.1669591118610607 Coefficient of Determination: 0.02028392722703687 RMSE: 0.5064146476026862 NRMSE: 0.1698466083990764 MAPE: 444.51337491723484 Predictor: RandomForests Pearson Correlation: 0.17587005978681197 Spearman Correlation: 0.1650353234332369 Coefficient of Determination: 0.030889851074135555 RMSE: 0.6140402867571487 NRMSE: 0.09601130275305272 MAPE: 292.87910088719593 Pearson Correlation: 0.21454532634317733 Spearman Correlation: 0.18853517257800473 Coefficient of Determination: 0.043041882369845075 RMSE: 0.5004983011759724 NRMSE: 0.1678623226375008 MAPE: 487.48603315576435 Protein: BRCA2 x_train_column_count: 3 x_train columns: ['mRNA_BRCA2', 'DNA_BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.05143028175634783 Spearman Correlation: 0.04753596744992079 Coefficient of Determination: 0.00264507388153723 RMSE: 0.19506590066505494 NRMSE: 0.1256665489869898 MAPE: 120.22828285757244 Pearson Correlation: 0.06789773639747414 Spearman Correlation: 0.07739948370183301 Coefficient of Determination: -0.012686573784358224 RMSE: 0.19440933786345033 NRMSE: 0.13159506532964899 MAPE: 116.05484511484767 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: RandomForests Pearson Correlation: 0.051543176828798554 Spearman Correlation: 0.04753596744992079 Coefficient of Determination: 0.002655923982284758 RMSE: 0.19506483961327917 NRMSE: 0.1256658654297176 MAPE: 120.24209959992235 Pearson Correlation: 0.06910618876150251 Spearman Correlation: 0.07739948370183301 Coefficient of Determination: -0.012619912359355778 RMSE: 0.1944029391330292 NRMSE: 0.1315907340492843 MAPE: 116.28683492346157 Protein: CDKN2A x_train_column_count: 3 x_train columns: ['mRNA_CDKN2A', 'DNA_CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.2379623039969145 Spearman Correlation: 0.21771898461275296 Coefficient of Determination: 0.05662605812351973 RMSE: 0.6442900140248208 NRMSE: 0.14565163649255583 MAPE: 253.52268885325805 Pearson Correlation: 0.2641640805295543 Spearman Correlation: 0.21251319168457883 Coefficient of Determination: 0.06526920872615449 RMSE: 0.6510843027646263 NRMSE: 0.17589266878231744 MAPE: 208.2421984686929 Predictor: ElasticNet Pearson Correlation: 0.2355745715780068 Spearman Correlation: 0.21623433883291823 Coefficient of Determination: 0.05116369278505828 RMSE: 0.6461526198857365 NRMSE: 0.1460727071065302 MAPE: 280.71251641610087 Pearson Correlation: 0.280328601661407 Spearman Correlation: 0.22223332419069416 Coefficient of Determination: 0.060753570004371316 RMSE: 0.6526550861623368 NRMSE: 0.1763170213319475 MAPE: 216.49640712490847 Predictor: RandomForests Pearson Correlation: 0.23740381737211105 Spearman Correlation: 0.21678474502225517 Coefficient of Determination: 0.056330535089676115 RMSE: 0.6443909218525878 NRMSE: 0.14567444825423032 MAPE: 264.1155112333008 Pearson Correlation: 0.28032860166140705 Spearman Correlation: 0.22223332419069416 Coefficient of Determination: 0.07213617660159288 RMSE: 0.648688309821386 NRMSE: 0.1752453830293349 MAPE: 204.84637922181741 Protein: TP53 x_train_column_count: 3 x_train columns: ['mRNA_TP53', 'DNA_TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 0.3764948288782511 Spearman Correlation: 0.38356299006688943 Coefficient of Determination: 0.14174835617206338 RMSE: 0.42181911621152457 NRMSE: 0.11298221942186275 MAPE: 450.5777908154689 Pearson Correlation: 0.30386310409880835 Spearman Correlation: 0.3233897776158394 Coefficient of Determination: 0.07181646911501138 RMSE: 0.3944093921022129 NRMSE: 0.1298894754165035 MAPE: 1937.5132283416729 Predictor: ElasticNet Pearson Correlation: 0.3764676643561125 Spearman Correlation: 0.398422249440095 Coefficient of Determination: 0.12268964463905574 RMSE: 0.42647694965493976 NRMSE: 0.11422979768446224 MAPE: 344.1589960199698 Pearson Correlation: 0.30494792667970105 Spearman Correlation: 0.33789773193637773 Coefficient of Determination: 0.0835431841074672 RMSE: 0.3919099790486638 NRMSE: 0.12906635239541045 MAPE: 1553.0343530002715 Predictor: RandomForests Pearson Correlation: 0.3795512355095633 Spearman Correlation: 0.38901673234621026 Coefficient of Determination: 0.14404567210967656 RMSE: 0.42125418800570985 NRMSE: 0.11283090612179185 MAPE: 440.87212704692956 Pearson Correlation: 0.3172330083791664 Spearman Correlation: 0.34058260936282136 Coefficient of Determination: 0.08109824974784985 RMSE: 0.3924324018937147 NRMSE: 0.12923840009672805 MAPE: 1893.9259491922617 Protein: CTNNB1 x_train_column_count: 3 x_train columns: ['mRNA_CTNNB1', 'DNA_CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.01994008816970446 Spearman Correlation: 0.019335471562701715 Coefficient of Determination: 0.00039760711621561473 RMSE: 0.7248394431596586 NRMSE: 0.14257266781267874 MAPE: 632.349219995056 Pearson Correlation: 0.1647206734164693 Spearman Correlation: 0.181427411809161 Coefficient of Determination: -0.11223248600360747 RMSE: 0.8084056187369651 NRMSE: 0.20119101533982858 MAPE: 279.46100713449437 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: RandomForests Pearson Correlation: 0.01858087118510807 Spearman Correlation: 0.019335471562701715 Coefficient of Determination: 0.00032460164259895397 RMSE: 0.7248659118241295 NRMSE: 0.14257787408027725 MAPE: 632.0610014394165 Pearson Correlation: 0.16472067341646923 Spearman Correlation: 0.181427411809161 Coefficient of Determination: -0.11243150411782188 RMSE: 0.8084779418201811 NRMSE: 0.2012090146636921 MAPE: 279.272702425613 Protein: CCNE1 x_train_column_count: 3 x_train columns: ['mRNA_CCNE1', 'DNA_CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.33354816522662983 Spearman Correlation: 0.290964145505619 Coefficient of Determination: 0.11125437852605102 RMSE: 0.48343057574554604 NRMSE: 0.11666640339444122 MAPE: 113.64535080143338 Pearson Correlation: 0.27995583263625373 Spearman Correlation: 0.30778983239407537 Coefficient of Determination: 0.06145706050577038 RMSE: 0.40521661317232804 NRMSE: 0.22022761709157554 MAPE: 74.85703197725846 Predictor: ElasticNet Pearson Correlation: 0.33354816522662956 Spearman Correlation: 0.290964145505619 Coefficient of Determination: 0.10689390478266736 RMSE: 0.48461505811548355 NRMSE: 0.1169522547760416 MAPE: 114.20018918544241 Pearson Correlation: 0.27995583263625373 Spearman Correlation: 0.30778983239407537 Coefficient of Determination: 0.07597545656562044 RMSE: 0.4020702336928653 NRMSE: 0.2185176189505733 MAPE: 75.63261158801879 Predictor: RandomForests Pearson Correlation: 0.33354816522662917 Spearman Correlation: 0.290964145505619 Coefficient of Determination: 0.11121602405793163 RMSE: 0.48344100703326 NRMSE: 0.116668920779318 MAPE: 113.33512788382372 Pearson Correlation: 0.2799558326362537 Spearman Correlation: 0.30778983239407537 Coefficient of Determination: 0.060149355377868585 RMSE: 0.40549881623715217 NRMSE: 0.22038098915600204 MAPE: 74.70113441764093 Protein: CCND1 x_train_column_count: 3 x_train columns: ['mRNA_CCND1', 'DNA_CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.15146461416552193 Spearman Correlation: 0.15277095649846625 Coefficient of Determination: 0.022941529344310374 RMSE: 0.23598954064201091 NRMSE: 0.14187008731529677 MAPE: 648.535329707009 Pearson Correlation: 0.06194510532500064 Spearman Correlation: 0.1168315941591683 Coefficient of Determination: -0.008416877728599115 RMSE: 0.2364183353377134 NRMSE: 0.18290704906365152 MAPE: 395.8764991606236 Predictor: ElasticNet Pearson Correlation: 0.1452847715143495 Spearman Correlation: 0.14712204193579073 Coefficient of Determination: 0.016938952780757965 RMSE: 0.2367133337121901 NRMSE: 0.14230521077790945 MAPE: 640.6685235246349 Pearson Correlation: 0.06194510532500062 Spearman Correlation: 0.1168315941591683 Coefficient of Determination: 2.9050882493275587e-05 RMSE: 0.23542620054390803 NRMSE: 0.1821394755708888 MAPE: 407.2493996486243 Predictor: RandomForests Pearson Correlation: 0.1503690965955172 Spearman Correlation: 0.15277095649846625 Coefficient of Determination: 0.022538033384983835 RMSE: 0.23603826392733218 NRMSE: 0.1418993783454162 MAPE: 642.9112490722935 Pearson Correlation: 0.061945105325000645 Spearman Correlation: 0.1168315941591683 Coefficient of Determination: -0.008838891507405577 RMSE: 0.23646779968180195 NRMSE: 0.18294531757272542 MAPE: 392.9439543189934 Protein: ERBB2 x_train_column_count: 3 x_train columns: ['mRNA_ERBB2', 'DNA_ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.46585346831228575 Spearman Correlation: 0.43794412137198274 Coefficient of Determination: 0.21701945393858524 RMSE: 0.8698269480881352 NRMSE: 0.15609837016817743 MAPE: 557.6451998438465 Pearson Correlation: 0.5176160662206035 Spearman Correlation: 0.475211776269609 Coefficient of Determination: 0.2570522817813645 RMSE: 0.9112487342038533 NRMSE: 0.1552462194326547 MAPE: 3207.132254030441 Predictor: ElasticNet Pearson Correlation: 0.4656006910163949 Spearman Correlation: 0.4453392552834091 Coefficient of Determination: 0.21170199142246615 RMSE: 0.8727755819051691 NRMSE: 0.15662752936941104 MAPE: 493.1213982166442 Pearson Correlation: 0.5166502690855924 Spearman Correlation: 0.4732350007172889 Coefficient of Determination: 0.23838143619614882 RMSE: 0.9226278757249922 NRMSE: 0.15718484347155598 MAPE: 2885.969933171282 Predictor: RandomForests Pearson Correlation: 0.4660197700215122 Spearman Correlation: 0.43794412137198274 Coefficient of Determination: 0.21715291539681192 RMSE: 0.8697528125806773 NRMSE: 0.15608506587597173 MAPE: 551.5168397815121 Pearson Correlation: 0.5183607729210366 Spearman Correlation: 0.475211776269609 Coefficient of Determination: 0.25709077558930304 RMSE: 0.9112251269652344 NRMSE: 0.1552421975510221 MAPE: 3171.98005676935 Protein: ERBB3 x_train_column_count: 3 x_train columns: ['mRNA_ERBB3', 'DNA_ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.07659882403055081 Spearman Correlation: 0.08198776538857021 Coefficient of Determination: 0.0058673798428632296 RMSE: 0.44382525513930293 NRMSE: 0.11977569785730365 MAPE: 212.18413794051355 Pearson Correlation: 0.16907423212620276 Spearman Correlation: 0.21960265667537585 Coefficient of Determination: 0.01837722115634488 RMSE: 0.5129957879365529 NRMSE: 0.18932598213624677 MAPE: 271.66892133572105 Predictor: ElasticNet Pearson Correlation: 0.07483168339803803 Spearman Correlation: 0.08608554980918413 Coefficient of Determination: 0.004095979470543631 RMSE: 0.4442204953204241 NRMSE: 0.1198823618381539 MAPE: 214.55675284155907 Pearson Correlation: 0.209067638221885 Spearman Correlation: 0.24101315694720662 Coefficient of Determination: 0.012315402557997679 RMSE: 0.5145773024579613 NRMSE: 0.18990965513526448 MAPE: 276.7195897009112 Predictor: RandomForests Pearson Correlation: 0.10801483367491736 Spearman Correlation: 0.09557752770094716 Coefficient of Determination: 0.011663926674400305 RMSE: 0.44252944463682975 NRMSE: 0.11942599579454961 MAPE: 212.74565057948647 Pearson Correlation: 0.163823091585933 Spearman Correlation: 0.23888678190588786 Coefficient of Determination: 0.023823321955285914 RMSE: 0.5115707432571888 NRMSE: 0.18880005582290635 MAPE: 277.7060953702978 Fold: 3 Protein: RB1 x_train_column_count: 3 x_train columns: ['mRNA_RB1', 'DNA_RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.03839642959292492 Spearman Correlation: -0.00981574523694931 Coefficient of Determination: 0.0014742858054844765 RMSE: 0.24040373714066013 NRMSE: 0.08791827718719285 MAPE: 207.49334117804264 Pearson Correlation: 0.11643523737544946 Spearman Correlation: 0.06582219880063195 Coefficient of Determination: -0.0227576884730607 RMSE: 0.22417317436999484 NRMSE: 0.15729905438763547 MAPE: 175.4817210491003 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: RandomForests Pearson Correlation: 0.03973075382813627 Spearman Correlation: -0.00981574523694931 Coefficient of Determination: 0.0015579033698874811 RMSE: 0.24039367110252768 NRMSE: 0.08791459592690451 MAPE: 202.7994560996377 Pearson Correlation: 0.11455374921181537 Spearman Correlation: 0.06582219880063195 Coefficient of Determination: -0.021932675032009685 RMSE: 0.2240827408313221 NRMSE: 0.15723559848949722 MAPE: 171.56463526765117 Protein: CDH1 x_train_column_count: 3 x_train columns: ['mRNA_CDH1', 'DNA_CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.5439310084765431 Spearman Correlation: 0.404210717694807 Coefficient of Determination: 0.2958609419823086 RMSE: 0.9857330019276791 NRMSE: 0.15695885512048643 MAPE: 340.76670398698695 Pearson Correlation: 0.6131545035601816 Spearman Correlation: 0.36152361208452555 Coefficient of Determination: 0.35640177768919634 RMSE: 0.7553463516580775 NRMSE: 0.14849729714506302 MAPE: 177.9305482179967 Predictor: ElasticNet Pearson Correlation: 0.5388213895317996 Spearman Correlation: 0.404210717694807 Coefficient of Determination: 0.2377158396790785 RMSE: 1.0256248316279708 NRMSE: 0.16331085500907147 MAPE: 396.6054134230249 Pearson Correlation: 0.5956951714273043 Spearman Correlation: 0.36152361208452555 Coefficient of Determination: 0.2492589191274437 RMSE: 0.8158002021865992 NRMSE: 0.16038222038033248 MAPE: 210.20730345694906 Predictor: RandomForests Pearson Correlation: 0.5448473405630035 Spearman Correlation: 0.404210717694807 Coefficient of Determination: 0.29676203811145485 RMSE: 0.9851020721862681 NRMSE: 0.15685839180062228 MAPE: 345.47096363620125 Pearson Correlation: 0.613231373758474 Spearman Correlation: 0.36152361208452555 Coefficient of Determination: 0.3555494485673165 RMSE: 0.7558463458011846 NRMSE: 0.1485955934811435 MAPE: 180.0549828053735 Protein: CDH2 x_train_column_count: 3 x_train columns: ['mRNA_CDH2', 'DNA_CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.009389588029374311 Spearman Correlation: 0.01541311711397809 Coefficient of Determination: 8.816436336112066e-05 RMSE: 0.38122116056775873 NRMSE: 0.13813361858386794 MAPE: 315.6533718112611 Pearson Correlation: -0.03758591038055206 Spearman Correlation: -0.022611461595587353 Coefficient of Determination: -0.00346083080972992 RMSE: 0.3325524028390163 NRMSE: 0.17522309252377197 MAPE: 658.4645417816371 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: RandomForests Pearson Correlation: 0.009359672195730057 Spearman Correlation: 0.013319405939719444 Coefficient of Determination: -1.7113433426141356e-05 RMSE: 0.3812412288708317 NRMSE: 0.138140890235101 MAPE: 329.0495516519559 Pearson Correlation: -0.03758591038055206 Spearman Correlation: -0.022611461595587353 Coefficient of Determination: -0.004964782861611061 RMSE: 0.33280151849674455 NRMSE: 0.175354352486324 MAPE: 700.4409558296086 Protein: CDH3 x_train_column_count: 3 x_train columns: ['mRNA_CDH3', 'DNA_CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.027243903960860023 Spearman Correlation: 0.019138881160663323 Coefficient of Determination: 0.0007422303030285571 RMSE: 0.21243182266775368 NRMSE: 0.1490373117442286 MAPE: 105.12457042227174 Pearson Correlation: 0.09327500196584818 Spearman Correlation: 0.12050699990653753 Coefficient of Determination: -0.001515853509941989 RMSE: 0.18847095591776392 NRMSE: 0.16393482992316397 MAPE: 99.68406263079969 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: RandomForests Pearson Correlation: 0.027139602227820515 Spearman Correlation: 0.019138881160663323 Coefficient of Determination: 0.0007180872973392427 RMSE: 0.2124343889283725 NRMSE: 0.14903911217402796 MAPE: 103.94125785660347 Pearson Correlation: 0.09327500196584822 Spearman Correlation: 0.12050699990653753 Coefficient of Determination: -0.0013108578980416397 RMSE: 0.18845166630989496 NRMSE: 0.16391805153643652 MAPE: 99.60715991669043 Protein: PTEN x_train_column_count: 3 x_train columns: ['mRNA_PTEN', 'DNA_PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 0.18914393920824057 Spearman Correlation: 0.1697950536206044 Coefficient of Determination: 0.03577542973921055 RMSE: 0.6179351613391518 NRMSE: 0.09662030511127384 MAPE: 333.38987414071244 Pearson Correlation: 0.11327759290149697 Spearman Correlation: 0.15397367037110896 Coefficient of Determination: -0.049797301028956964 RMSE: 0.4825421834371145 NRMSE: 0.11536895314806928 MAPE: 112.19636729663964 Predictor: ElasticNet Pearson Correlation: 0.1693903145438874 Spearman Correlation: 0.1596831840789038 Coefficient of Determination: 0.01740294216980931 RMSE: 0.6237944990387503 NRMSE: 0.09753647080584009 MAPE: 297.45234188327595 Pearson Correlation: 0.08973077346160512 Spearman Correlation: 0.1025660695111154 Coefficient of Determination: -0.047229987377911176 RMSE: 0.48195178590739024 NRMSE: 0.11522779752005696 MAPE: 94.78915710812915 Predictor: RandomForests Pearson Correlation: 0.1915288431860515 Spearman Correlation: 0.1697950536206044 Coefficient of Determination: 0.036651750364116054 RMSE: 0.6176542970908315 NRMSE: 0.09657638919409452 MAPE: 338.0970252692286 Pearson Correlation: 0.09649125795305669 Spearman Correlation: 0.15397367037110896 Coefficient of Determination: -0.056514455905929184 RMSE: 0.48408350107877324 NRMSE: 0.11573746021105849 MAPE: 113.65088940562404 Protein: BRCA2 x_train_column_count: 3 x_train columns: ['mRNA_BRCA2', 'DNA_BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.06917256780773243 Spearman Correlation: 0.07998911354273022 Coefficient of Determination: 0.004784844137115218 RMSE: 0.18959492348529483 NRMSE: 0.12778349249541346 MAPE: 116.60091814521103 Pearson Correlation: 0.009181468406042186 Spearman Correlation: -0.022522792991643534 Coefficient of Determination: -0.006432559339045962 RMSE: 0.214819021831397 NRMSE: 0.14775465945250124 MAPE: 116.11688596308257 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: RandomForests Pearson Correlation: 0.06942147148844663 Spearman Correlation: 0.07998911354273022 Coefficient of Determination: 0.004813356104459876 RMSE: 0.18959220760875645 NRMSE: 0.1277816620445613 MAPE: 115.1839683252552 Pearson Correlation: 0.011521182436648233 Spearman Correlation: -0.022522792991643534 Coefficient of Determination: -0.005846975465553461 RMSE: 0.2147565174652705 NRMSE: 0.14771166832791374 MAPE: 114.9006263220048 Protein: CDKN2A x_train_column_count: 3 x_train columns: ['mRNA_CDKN2A', 'DNA_CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.2389049854710146 Spearman Correlation: 0.20181029756227176 Coefficient of Determination: 0.05707559208290569 RMSE: 0.6482566820230923 NRMSE: 0.15134868369982543 MAPE: 282.38403923884 Pearson Correlation: 0.2693582797380933 Spearman Correlation: 0.27612178414269084 Coefficient of Determination: 0.06803634172173478 RMSE: 0.6338134957107924 NRMSE: 0.19567580368336648 MAPE: 134.8533656924529 Predictor: ElasticNet Pearson Correlation: 0.23819216171272906 Spearman Correlation: 0.2034746776897801 Coefficient of Determination: 0.05252178804136476 RMSE: 0.6498201574624413 NRMSE: 0.15171370878372276 MAPE: 294.8495839642898 Pearson Correlation: 0.26935827973809334 Spearman Correlation: 0.27612178414269084 Coefficient of Determination: 0.057956808850773145 RMSE: 0.6372317422661008 NRMSE: 0.1967311111932638 MAPE: 145.31185509186773 Predictor: RandomForests Pearson Correlation: 0.24031237976786116 Spearman Correlation: 0.20452195856965733 Coefficient of Determination: 0.05774930493514907 RMSE: 0.6480250532232883 NRMSE: 0.15129460525384952 MAPE: 274.55827298394445 Pearson Correlation: 0.26935827973809334 Spearman Correlation: 0.27612178414269084 Coefficient of Determination: 0.06839184128377818 RMSE: 0.6336925994132379 NRMSE: 0.1956384796434929 MAPE: 134.10394716380705 Protein: TP53 x_train_column_count: 3 x_train columns: ['mRNA_TP53', 'DNA_TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.37849352798066227 Spearman Correlation: 0.37172013314870056 Coefficient of Determination: 0.14325735072324808 RMSE: 0.416626185491185 NRMSE: 0.10012645649872268 MAPE: 779.2426688622805 Pearson Correlation: 0.3060657906254886 Spearman Correlation: 0.33894945399230964 Coefficient of Determination: 0.06517534171950312 RMSE: 0.41618470383501355 NRMSE: 0.15519493447602575 MAPE: 451.8463113329108 Predictor: ElasticNet Pearson Correlation: 0.3775114190336964 Spearman Correlation: 0.3935213563070349 Coefficient of Determination: 0.12284669622590849 RMSE: 0.42155973293263826 NRMSE: 0.10131212038756028 MAPE: 601.0444854661916 Pearson Correlation: 0.31118407941499016 Spearman Correlation: 0.37148201997374525 Coefficient of Determination: 0.07778456656840549 RMSE: 0.4133683560172633 NRMSE: 0.15414472068630725 MAPE: 316.05499218464274 Predictor: RandomForests Pearson Correlation: 0.3823590008380219 Spearman Correlation: 0.3819693899774347 Coefficient of Determination: 0.14616875231914617 RMSE: 0.41591768896717 NRMSE: 0.09995618576476088 MAPE: 755.8886692273919 Pearson Correlation: 0.313286468906228 Spearman Correlation: 0.3747023763488925 Coefficient of Determination: 0.0730172717404246 RMSE: 0.41443541071553114 NRMSE: 0.154542624507505 MAPE: 433.43163062502896 Protein: CTNNB1 x_train_column_count: 3 x_train columns: ['mRNA_CTNNB1', 'DNA_CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.03649667635347285 Spearman Correlation: 0.02972133472741124 Coefficient of Determination: 0.0013320073848502867 RMSE: 0.7686849812582893 NRMSE: 0.15119688852444715 MAPE: 446.9042862818979 Pearson Correlation: 0.10823889760112794 Spearman Correlation: 0.12981224501749486 Coefficient of Determination: -0.0014904992525361926 RMSE: 0.6134270171338964 NRMSE: 0.2005384344482972 MAPE: 1414.734621259794 Predictor: ElasticNet Pearson Correlation: 0.03625719175716142 Spearman Correlation: 0.02923190463664803 Coefficient of Determination: 0.0007619158917525626 RMSE: 0.7689043525858902 NRMSE: 0.15124003788078094 MAPE: 445.57064204780204 Pearson Correlation: 0.10823889760112794 Spearman Correlation: 0.12981224501749486 Coefficient of Determination: -0.005667674658580646 RMSE: 0.6147049752877761 NRMSE: 0.20095621801555333 MAPE: 1394.5858990080012 Predictor: RandomForests Pearson Correlation: 0.035540160171564 Spearman Correlation: 0.028306572326890513 Coefficient of Determination: 0.0012292309038610671 RMSE: 0.7687245342956543 NRMSE: 0.15120466842951502 MAPE: 450.0867059202033 Pearson Correlation: 0.10823889760112794 Spearman Correlation: 0.12981224501749486 Coefficient of Determination: -0.0026287891123575324 RMSE: 0.6137755274080023 NRMSE: 0.20065236765111716 MAPE: 1425.4383929297464 Protein: CCNE1 x_train_column_count: 3 x_train columns: ['mRNA_CCNE1', 'DNA_CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.3407690680103139 Spearman Correlation: 0.3040131516273411 Coefficient of Determination: 0.11612355771261806 RMSE: 0.49115441484115224 NRMSE: 0.1185303991218361 MAPE: 96.27451758243541 Pearson Correlation: 0.24027453073723642 Spearman Correlation: 0.25849269768858923 Coefficient of Determination: -0.01124376929833093 RMSE: 0.36693426014280706 NRMSE: 0.15983545765683976 MAPE: 140.20540556211614 Predictor: ElasticNet Pearson Correlation: 0.3407402279804913 Spearman Correlation: 0.30325739171689065 Coefficient of Determination: 0.11169019921525192 RMSE: 0.4923846433456808 NRMSE: 0.11882729042780144 MAPE: 97.5271348562642 Pearson Correlation: 0.24027453073723654 Spearman Correlation: 0.25849269768858923 Coefficient of Determination: 0.02588291140503929 RMSE: 0.3601354843762335 NRMSE: 0.15687393142668182 MAPE: 138.0538740225019 Predictor: RandomForests Pearson Correlation: 0.3407658025059528 Spearman Correlation: 0.3040131516273411 Coefficient of Determination: 0.11611796693056586 RMSE: 0.4911559681877592 NRMSE: 0.11853077399130227 MAPE: 96.27268841245778 Pearson Correlation: 0.2402745307372365 Spearman Correlation: 0.25849269768858923 Coefficient of Determination: -0.012320474095645517 RMSE: 0.36712955171466677 NRMSE: 0.15992052607686838 MAPE: 140.29853856782722 Protein: CCND1 x_train_column_count: 3 x_train columns: ['mRNA_CCND1', 'DNA_CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.13408455777124595 Spearman Correlation: 0.14836326797950053 Coefficient of Determination: 0.01797866863271036 RMSE: 0.24244709009833962 NRMSE: 0.14575217930428852 MAPE: 654.4861486262495 Pearson Correlation: 0.09526960112894245 Spearman Correlation: 0.09617412824180921 Coefficient of Determination: 0.0051654508469400895 RMSE: 0.20919718949938823 NRMSE: 0.1982291695482818 MAPE: 427.12042055854624 Predictor: ElasticNet Pearson Correlation: 0.1340845577712461 Spearman Correlation: 0.14836326797950053 Coefficient of Determination: 0.014073447473207823 RMSE: 0.24292868354477365 NRMSE: 0.14604169935721203 MAPE: 638.4807950562473 Pearson Correlation: 0.09526960112894244 Spearman Correlation: 0.09617412824180921 Coefficient of Determination: 0.008654282010082004 RMSE: 0.20883004569217883 NRMSE: 0.19788127475972334 MAPE: 445.75780503030444 Predictor: RandomForests Pearson Correlation: 0.13408455777124592 Spearman Correlation: 0.14836326797950053 Coefficient of Determination: 0.017971603389333457 RMSE: 0.24244796225078777 NRMSE: 0.1457527036171188 MAPE: 656.7106122405884 Pearson Correlation: 0.09526960112894242 Spearman Correlation: 0.09617412824180921 Coefficient of Determination: 0.005223699526106462 RMSE: 0.2091910650446448 NRMSE: 0.19822336619317632 MAPE: 428.92509733903415 Protein: ERBB2 x_train_column_count: 3 x_train columns: ['mRNA_ERBB2', 'DNA_ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 0.47096438446589306 Spearman Correlation: 0.44407733310780617 Coefficient of Determination: 0.2218074514353371 RMSE: 0.8655986550699498 NRMSE: 0.14746897713170176 MAPE: 1305.3497990098904 Pearson Correlation: 0.5023763788531023 Spearman Correlation: 0.4567049370190203 Coefficient of Determination: 0.24437872008572725 RMSE: 0.9271066649100332 NRMSE: 0.16723909822318228 MAPE: 213.26209376372668 Predictor: ElasticNet Pearson Correlation: 0.47034752059976753 Spearman Correlation: 0.44966370584262244 Coefficient of Determination: 0.21595301654987653 RMSE: 0.8688485548756962 NRMSE: 0.14802265105127965 MAPE: 1156.2409555895952 Pearson Correlation: 0.502281952522862 Spearman Correlation: 0.4609822444508052 Coefficient of Determination: 0.2305204676048781 RMSE: 0.9355697029138097 NRMSE: 0.16876573037625545 MAPE: 180.57335255077075 Predictor: RandomForests Pearson Correlation: 0.47105475694520504 Spearman Correlation: 0.44407733310780617 Coefficient of Determination: 0.22185054818074046 RMSE: 0.8655746860654739 NRMSE: 0.1474648936173014 MAPE: 1288.7116223143255 Pearson Correlation: 0.5027134900887094 Spearman Correlation: 0.4567049370190203 Coefficient of Determination: 0.2436372575589778 RMSE: 0.9275614206969263 NRMSE: 0.16732113079892602 MAPE: 211.12781607181543 Protein: ERBB3 x_train_column_count: 3 x_train columns: ['mRNA_ERBB3', 'DNA_ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.12429172393888782 Spearman Correlation: 0.1339314208913922 Coefficient of Determination: 0.015448432639700749 RMSE: 0.44750717236271076 NRMSE: 0.16226550648243418 MAPE: 228.48664676156892 Pearson Correlation: 0.06205606952881687 Spearman Correlation: 0.08555235150149026 Coefficient of Determination: -0.0161699356283882 RMSE: 0.49870552275287533 NRMSE: 0.13865448606460704 MAPE: 153.51606596493917 Predictor: ElasticNet Pearson Correlation: 0.12085420095112119 Spearman Correlation: 0.13199475909163733 Coefficient of Determination: 0.0126204329975943 RMSE: 0.4481494153314655 NRMSE: 0.1624983829301111 MAPE: 230.30768448742575 Pearson Correlation: 0.06290349200267298 Spearman Correlation: 0.06968568349795715 Coefficient of Determination: -0.012070666522441709 RMSE: 0.49769860748972344 NRMSE: 0.13837453464647903 MAPE: 156.1525938798953 Predictor: RandomForests Pearson Correlation: 0.13292836668008337 Spearman Correlation: 0.13742017446434546 Coefficient of Determination: 0.017668145831318927 RMSE: 0.4470024257759304 NRMSE: 0.1620824860402885 MAPE: 229.07131429614753 Pearson Correlation: 0.10698297130504764 Spearman Correlation: 0.09480794855547801 Coefficient of Determination: -0.006816679204470377 RMSE: 0.49640506900590314 NRMSE: 0.1380148937251416 MAPE: 153.39651246478215 Fold: 4 Protein: RB1 x_train_column_count: 3 x_train columns: ['mRNA_RB1', 'DNA_RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.028262703741687448 Spearman Correlation: 0.06014404344413468 Coefficient of Determination: 0.0007987804227903572 RMSE: 0.25141036741772654 NRMSE: 0.09194352231485026 MAPE: 142.27851725145428 Pearson Correlation: 0.17604283312829436 Spearman Correlation: 0.07851406254007466 Coefficient of Determination: -0.05492577421775047 RMSE: 0.1693499676509782 NRMSE: 0.16225612966214906 MAPE: 99.41127739179844 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: RandomForests Pearson Correlation: 0.028383048041087364 Spearman Correlation: -0.019127173685724475 Coefficient of Determination: 0.0007791603059924546 RMSE: 0.25141283572764356 NRMSE: 0.09194442500279533 MAPE: 135.58104786915203 Pearson Correlation: 0.158296546136676 Spearman Correlation: 0.1101051206614058 Coefficient of Determination: -0.05769595340281697 RMSE: 0.1695721738919623 NRMSE: 0.16246902798831325 MAPE: 98.66008265200095 Protein: CDH1 x_train_column_count: 3 x_train columns: ['mRNA_CDH1', 'DNA_CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 0.5403668719781174 Spearman Correlation: 0.4080047575262007 Coefficient of Determination: 0.29199635633141485 RMSE: 0.9415691485395413 NRMSE: 0.14992661834647641 MAPE: 347.30143794234516 Pearson Correlation: 0.6122095731902552 Spearman Correlation: 0.3143654519148087 Coefficient of Determination: 0.3207464739597782 RMSE: 0.961348840676547 NRMSE: 0.17440383888040112 MAPE: 202.28098296964774 Predictor: ElasticNet Pearson Correlation: 0.5364650601103851 Spearman Correlation: 0.4080047575262007 Coefficient of Determination: 0.23263658559004208 RMSE: 0.9802458635728508 NRMSE: 0.15608513480030106 MAPE: 415.75814846311374 Pearson Correlation: 0.5900316983240467 Spearman Correlation: 0.3143654519148087 Coefficient of Determination: 0.20034425988612603 RMSE: 1.0430775197829543 NRMSE: 0.189230710021943 MAPE: 240.24858508221416 Predictor: RandomForests Pearson Correlation: 0.5413158703340534 Spearman Correlation: 0.4080047575262007 Coefficient of Determination: 0.2928985799606407 RMSE: 0.9409690268097551 NRMSE: 0.1498310606047188 MAPE: 349.7090460374542 Pearson Correlation: 0.6131070784510475 Spearman Correlation: 0.3143654519148087 Coefficient of Determination: 0.32133915891200204 RMSE: 0.9609293350616906 NRMSE: 0.17432773394682535 MAPE: 202.0160875971328 Protein: CDH2 x_train_column_count: 3 x_train columns: ['mRNA_CDH2', 'DNA_CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.00960748972119575 Spearman Correlation: -0.004611572799852624 Coefficient of Determination: 9.230385874281488e-05 RMSE: 0.37934602642756354 NRMSE: 0.13745417292106804 MAPE: 682.533514364653 Pearson Correlation: -0.0702322738717098 Spearman Correlation: -0.036313749968782214 Coefficient of Determination: -0.05818282380596451 RMSE: 0.34282517609294816 NRMSE: 0.17685257319804595 MAPE: 154.44137901248612 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: RandomForests Pearson Correlation: 0.00875645695825928 Spearman Correlation: -0.004611572799852624 Coefficient of Determination: 1.876048981719336e-05 RMSE: 0.37935997665112714 NRMSE: 0.13745922771618493 MAPE: 700.0980773629162 Pearson Correlation: -0.07023227387170977 Spearman Correlation: -0.036313749968782214 Coefficient of Determination: -0.05657126279663971 RMSE: 0.34256402358406546 NRMSE: 0.17671785294873582 MAPE: 155.26237207904765 Protein: CDH3 x_train_column_count: 3 x_train columns: ['mRNA_CDH3', 'DNA_CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.04617839343294013 Spearman Correlation: 0.03303051259494273 Coefficient of Determination: 0.0021324440200473083 RMSE: 0.20569041268567753 NRMSE: 0.14659293633256662 MAPE: 170.2422148710759 Pearson Correlation: 0.0179533415226667 Spearman Correlation: 0.07993861815995854 Coefficient of Determination: -0.10693351367847814 RMSE: 0.2186242624432193 NRMSE: 0.19458520608364568 MAPE: 205.8562509054005 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: RandomForests Pearson Correlation: 0.04617537484853737 Spearman Correlation: 0.03303051259494273 Coefficient of Determination: 0.0020882657562331097 RMSE: 0.20569496586745326 NRMSE: 0.14659618132720417 MAPE: 176.0385979293155 Pearson Correlation: 0.01893420725727981 Spearman Correlation: 0.07993861815995854 Coefficient of Determination: -0.10915533583482406 RMSE: 0.21884356230346116 NRMSE: 0.19478039260147492 MAPE: 213.0089851876375 Protein: PTEN x_train_column_count: 3 x_train columns: ['mRNA_PTEN', 'DNA_PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 0.09771648720906136 Spearman Correlation: 0.11903007098956325 Coefficient of Determination: 0.009548511872478516 RMSE: 0.5590927704151368 NRMSE: 0.10815010260274234 MAPE: 285.2137191626578 Pearson Correlation: 0.4007774223630548 Spearman Correlation: 0.363266311565091 Coefficient of Determination: 0.060552508014122264 RMSE: 0.7226457943545705 NRMSE: 0.11299285346799633 MAPE: 420.8115393553382 Predictor: ElasticNet Pearson Correlation: 0.05244895174608728 Spearman Correlation: 0.0637727402650611 Coefficient of Determination: 0.0014986574135971154 RMSE: 0.5613601746322159 NRMSE: 0.10858870601830237 MAPE: 271.90794509254516 Pearson Correlation: 0.2143020279941333 Spearman Correlation: 0.24425890692005897 Coefficient of Determination: 0.005330934985404934 RMSE: 0.7435814200622344 NRMSE: 0.11626634665971923 MAPE: 419.75627134469124 Predictor: RandomForests Pearson Correlation: 0.09776358752616915 Spearman Correlation: 0.11903007098956325 Coefficient of Determination: 0.009545536378595454 RMSE: 0.559093610221977 NRMSE: 0.10815026505377147 MAPE: 287.0381711428442 Pearson Correlation: 0.39991062880435724 Spearman Correlation: 0.363266311565091 Coefficient of Determination: 0.061912553669285164 RMSE: 0.7221225148460754 NRMSE: 0.1129110335151396 MAPE: 423.05838152654644 Protein: BRCA2 x_train_column_count: 3 x_train columns: ['mRNA_BRCA2', 'DNA_BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.05381906587810235 Spearman Correlation: 0.055613507534915285 Coefficient of Determination: 0.0028964918519913674 RMSE: 0.19151929633725695 NRMSE: 0.12338173382976773 MAPE: 107.0950352856325 Pearson Correlation: 0.06012117487185469 Spearman Correlation: 0.057925414579002084 Coefficient of Determination: 0.0035698829266691545 RMSE: 0.20773559471132616 NRMSE: 0.20182024337791934 MAPE: 128.5568049762226 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: RandomForests Pearson Correlation: 0.05362229631725822 Spearman Correlation: 0.055613507534915285 Coefficient of Determination: 0.0028202589299607395 RMSE: 0.19152661744104232 NRMSE: 0.12338645027607817 MAPE: 104.95504697314988 Pearson Correlation: 0.06729925912259345 Spearman Correlation: 0.06708785159967783 Coefficient of Determination: 0.004340945745504476 RMSE: 0.20765520362831333 NRMSE: 0.20174214146206035 MAPE: 120.39506537898296 Protein: CDKN2A x_train_column_count: 3 x_train columns: ['mRNA_CDKN2A', 'DNA_CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.24344154645371927 Spearman Correlation: 0.21826061517279477 Coefficient of Determination: 0.05926378653977815 RMSE: 0.6536794659960842 NRMSE: 0.14777426607801156 MAPE: 256.5613965610823 Pearson Correlation: 0.2524167076420997 Spearman Correlation: 0.20081933450401612 Coefficient of Determination: 0.06191598127931064 RMSE: 0.6108389822215795 NRMSE: 0.18404307991008723 MAPE: 175.72034861996272 Predictor: ElasticNet Pearson Correlation: 0.2427879852310681 Spearman Correlation: 0.2201975731593358 Coefficient of Determination: 0.05441270048323621 RMSE: 0.6553627103349011 NRMSE: 0.1481547892697866 MAPE: 268.9332253039508 Pearson Correlation: 0.25241670764209967 Spearman Correlation: 0.20081933450401612 Coefficient of Determination: 0.058046281209057304 RMSE: 0.6120975746950623 NRMSE: 0.18442228824798504 MAPE: 179.904644520075 Predictor: RandomForests Pearson Correlation: 0.2448895264330814 Spearman Correlation: 0.22129983903120407 Coefficient of Determination: 0.059949106159552734 RMSE: 0.6534413222030347 NRMSE: 0.14772043002216223 MAPE: 248.58861724044723 Pearson Correlation: 0.2524167076420996 Spearman Correlation: 0.20081933450401612 Coefficient of Determination: 0.06169157351235399 RMSE: 0.6109120400779922 NRMSE: 0.18406509191864784 MAPE: 175.36294234897574 Protein: TP53 x_train_column_count: 3 x_train columns: ['mRNA_TP53', 'DNA_TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 0.36196529422370355 Spearman Correlation: 0.3665405720051997 Coefficient of Determination: 0.13101887422245218 RMSE: 0.41959728896384907 NRMSE: 0.10084049242101636 MAPE: 812.6610055719276 Pearson Correlation: 0.366885691754072 Spearman Correlation: 0.35076098427312324 Coefficient of Determination: 0.1306040109505867 RMSE: 0.4026279107411192 NRMSE: 0.12776971018695074 MAPE: 259.4342573487691 Predictor: ElasticNet Pearson Correlation: 0.3619318721690354 Spearman Correlation: 0.3949467797603821 Coefficient of Determination: 0.11269982630851239 RMSE: 0.4239970011803055 NRMSE: 0.10189786137474298 MAPE: 634.5327742898687 Pearson Correlation: 0.36646210981627575 Spearman Correlation: 0.35542745932181025 Coefficient of Determination: 0.11462298586919584 RMSE: 0.4063115638626941 NRMSE: 0.12893867855505653 MAPE: 182.94782263363578 Predictor: RandomForests Pearson Correlation: 0.3674370760058357 Spearman Correlation: 0.38469174066227757 Coefficient of Determination: 0.13499537286211727 RMSE: 0.41863613963911744 NRMSE: 0.10060950243670211 MAPE: 792.7574451538532 Pearson Correlation: 0.3693766958083233 Spearman Correlation: 0.3572663042126617 Coefficient of Determination: 0.1329191111988135 RMSE: 0.40209147777511517 NRMSE: 0.12759947885729728 MAPE: 249.18538482218827 Protein: CTNNB1 x_train_column_count: 3 x_train columns: ['mRNA_CTNNB1', 'DNA_CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.08093369717524786 Spearman Correlation: 0.09005676349040073 Coefficient of Determination: 0.006550263338454876 RMSE: 0.7090929867185783 NRMSE: 0.17126195215886833 MAPE: 642.8541022423885 Pearson Correlation: -0.08344278909401986 Spearman Correlation: -0.1435934892139199 Coefficient of Determination: -0.16557259128868318 RMSE: 0.8663431637974591 NRMSE: 0.18214262126765182 MAPE: 960.433276708362 Predictor: ElasticNet Pearson Correlation: 0.08030724619718217 Spearman Correlation: 0.08924812234715077 Coefficient of Determination: 0.005315696794297886 RMSE: 0.709533447187458 NRMSE: 0.17136833329810117 MAPE: 637.9702015836276 Pearson Correlation: -0.08344278909401985 Spearman Correlation: -0.1435934892139199 Coefficient of Determination: -0.1577786309994169 RMSE: 0.8634417701372101 NRMSE: 0.1815326234415125 MAPE: 947.3386819188308 Predictor: RandomForests Pearson Correlation: 0.08031527176218628 Spearman Correlation: 0.09005676349040073 Coefficient of Determination: 0.006401015803068955 RMSE: 0.7091462488023323 NRMSE: 0.17127481615359202 MAPE: 647.8980635587087 Pearson Correlation: -0.08344278909401988 Spearman Correlation: -0.1435934892139199 Coefficient of Determination: -0.17013746803503937 RMSE: 0.8680379896868025 NRMSE: 0.1824989466165172 MAPE: 967.9614264675542 Protein: CCNE1 x_train_column_count: 3 x_train columns: ['mRNA_CCNE1', 'DNA_CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.326089135220181 Spearman Correlation: 0.30626347418463923 Coefficient of Determination: 0.10633412410864551 RMSE: 0.4772112493174491 NRMSE: 0.1151654920282475 MAPE: 99.56282918330152 Pearson Correlation: 0.31499757982157206 Spearman Correlation: 0.2501321513926121 Coefficient of Determination: 0.08123039915920582 RMSE: 0.43334154219060883 NRMSE: 0.1768307933528968 MAPE: 125.73343370800396 Predictor: ElasticNet Pearson Correlation: 0.326072221724597 Spearman Correlation: 0.30552318110724047 Coefficient of Determination: 0.10205350190356732 RMSE: 0.4783527949338937 NRMSE: 0.11544098147401928 MAPE: 99.6873528092774 Pearson Correlation: 0.31499757982157206 Spearman Correlation: 0.2501321513926121 Coefficient of Determination: 0.08301540058014278 RMSE: 0.4329203858240101 NRMSE: 0.17665893488288997 MAPE: 128.68272047108675 Predictor: RandomForests Pearson Correlation: 0.3260872715335617 Spearman Correlation: 0.30626347418463923 Coefficient of Determination: 0.10631203503118625 RMSE: 0.4772171469864764 NRMSE: 0.1151669153139649 MAPE: 99.50178840219898 Pearson Correlation: 0.3149975798215721 Spearman Correlation: 0.2501321513926121 Coefficient of Determination: 0.08032500430125111 RMSE: 0.4335550062586619 NRMSE: 0.1769179002116469 MAPE: 125.44100498381027 Protein: CCND1 x_train_column_count: 3 x_train columns: ['mRNA_CCND1', 'DNA_CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 0.11290620533455312 Spearman Correlation: 0.12330311696764923 Coefficient of Determination: 0.012747811203048354 RMSE: 0.23877054748692597 NRMSE: 0.15254759553732125 MAPE: 648.8042688921419 Pearson Correlation: 0.223419569822438 Spearman Correlation: 0.23749319650736103 Coefficient of Determination: 0.035480790076046764 RMSE: 0.22490257810954692 NRMSE: 0.14184067741520368 MAPE: 466.6026205476993 Predictor: ElasticNet Pearson Correlation: 0.10558276319009964 Spearman Correlation: 0.11789104622114042 Coefficient of Determination: 0.007595537576513989 RMSE: 0.23939278480685278 NRMSE: 0.15294513538470808 MAPE: 638.2264132634712 Pearson Correlation: 0.2234195698224379 Spearman Correlation: 0.23749319650736103 Coefficient of Determination: 0.017611619814988932 RMSE: 0.2269763466709267 NRMSE: 0.14314855365219897 MAPE: 477.0444647165697 Predictor: RandomForests Pearson Correlation: 0.11198623706832093 Spearman Correlation: 0.12330311696764923 Coefficient of Determination: 0.012519273027129962 RMSE: 0.23879818228398417 NRMSE: 0.15256525107268254 MAPE: 651.2630251354358 Pearson Correlation: 0.22341956982243796 Spearman Correlation: 0.23749319650736103 Coefficient of Determination: 0.034921225064696526 RMSE: 0.22496780717138087 NRMSE: 0.14188181582453385 MAPE: 468.76226171014287 Protein: ERBB2 x_train_column_count: 3 x_train columns: ['mRNA_ERBB2', 'DNA_ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 0.4640469714584972 Spearman Correlation: 0.4102552615504692 Coefficient of Determination: 0.21533959171980332 RMSE: 0.8688251505125065 NRMSE: 0.1480186637328154 MAPE: 1280.5988210259354 Pearson Correlation: 0.5008481157421638 Spearman Correlation: 0.5460922858494153 Coefficient of Determination: 0.21350913724984089 RMSE: 0.9193602306517072 NRMSE: 0.1655490745582359 MAPE: 180.02799917081788 Predictor: ElasticNet Pearson Correlation: 0.46400138177624506 Spearman Correlation: 0.41656187286452095 Coefficient of Determination: 0.20998183788730973 RMSE: 0.8717863246109658 NRMSE: 0.14852314847623657 MAPE: 1127.6093685882506 Pearson Correlation: 0.4995995495027022 Spearman Correlation: 0.5466136711612569 Coefficient of Determination: 0.1948088652362836 RMSE: 0.9302257662786234 NRMSE: 0.1675056301146367 MAPE: 147.8156264660273 Predictor: RandomForests Pearson Correlation: 0.4646093245948106 Spearman Correlation: 0.42078951116877533 Coefficient of Determination: 0.21584876961257382 RMSE: 0.8685432079385177 NRMSE: 0.14797063017505455 MAPE: 1266.1061631883533 Pearson Correlation: 0.5007580252584878 Spearman Correlation: 0.5484580061289808 Coefficient of Determination: 0.2111074026175056 RMSE: 0.9207629018536433 NRMSE: 0.16580165337516536 MAPE: 178.99915233578358 Protein: ERBB3 x_train_column_count: 3 x_train columns: ['mRNA_ERBB3', 'DNA_ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.12053194378595317 Spearman Correlation: 0.13479735741980176 Coefficient of Determination: 0.014527949472819879 RMSE: 0.4742330314745649 NRMSE: 0.12967142299813927 MAPE: 227.497663285388 Pearson Correlation: 0.05536679228740382 Spearman Correlation: 0.06705038762892108 Coefficient of Determination: -0.00793841583573407 RMSE: 0.38610428194890656 NRMSE: 0.1900428130301213 MAPE: 219.7894834364833 Predictor: ElasticNet Pearson Correlation: 0.11801806003201727 Spearman Correlation: 0.130353610005927 Coefficient of Determination: 0.012030324658404479 RMSE: 0.4748336099746473 NRMSE: 0.12983564156487556 MAPE: 229.42299283118697 Pearson Correlation: 0.0564396759790701 Spearman Correlation: 0.06761406430646916 Coefficient of Determination: 0.0006292270663905697 RMSE: 0.3844598048464108 NRMSE: 0.18923339166617156 MAPE: 218.29947967235643 Predictor: RandomForests Pearson Correlation: 0.13965217892492987 Spearman Correlation: 0.14024591387751537 Coefficient of Determination: 0.019491380988203688 RMSE: 0.47303726215853276 NRMSE: 0.12934445904055647 MAPE: 229.02088696704794 Pearson Correlation: 0.056176391636211694 Spearman Correlation: 0.06796123727710182 Coefficient of Determination: -0.009137095655328054 RMSE: 0.3863337988945699 NRMSE: 0.1901557826293492 MAPE: 220.4416189155432 Fold: 5 Protein: RB1 x_train_column_count: 3 x_train columns: ['mRNA_RB1', 'DNA_RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.07809386539667038 Spearman Correlation: 0.02607078328157438 Coefficient of Determination: 0.006098651812593281 RMSE: 0.23319072016016446 NRMSE: 0.11519971552647892 MAPE: 110.35057160160224 Pearson Correlation: -0.05331335650940414 Spearman Correlation: -0.07191636227827158 Coefficient of Determination: -0.1281209424883092 RMSE: 0.2553037633206137 NRMSE: 0.12872545192939805 MAPE: 113.66264624042168 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: RandomForests Pearson Correlation: 0.07795529071798957 Spearman Correlation: 0.02607078328157438 Coefficient of Determination: 0.006055968146755464 RMSE: 0.23319572736129776 NRMSE: 0.11520218915898774 MAPE: 113.23442478621459 Pearson Correlation: -0.05862607030899615 Spearman Correlation: -0.07191636227827158 Coefficient of Determination: -0.13091938176986617 RMSE: 0.25562022298854187 NRMSE: 0.1288850124985085 MAPE: 123.65853916404335 Protein: CDH1 x_train_column_count: 3 x_train columns: ['mRNA_CDH1', 'DNA_CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.5915068417579409 Spearman Correlation: 0.408654151461635 Coefficient of Determination: 0.3498803438464536 RMSE: 0.907952467978761 NRMSE: 0.14457381420635662 MAPE: 180.34003595595001 Pearson Correlation: 0.410196305328357 Spearman Correlation: 0.3229962804610871 Coefficient of Determination: 0.13571520944786297 RMSE: 1.0800411120226492 NRMSE: 0.21239328863201298 MAPE: 585.1765308484638 Predictor: ElasticNet Pearson Correlation: 0.5845493985055014 Spearman Correlation: 0.408654151461635 Coefficient of Determination: 0.2762607567017292 RMSE: 0.957982390408158 NRMSE: 0.15254010866025888 MAPE: 192.90167545458178 Pearson Correlation: 0.40793775606939464 Spearman Correlation: 0.3229962804610871 Coefficient of Determination: 0.1408654329771667 RMSE: 1.0768183522474553 NRMSE: 0.211759523361872 MAPE: 791.8462051150209 Predictor: RandomForests Pearson Correlation: 0.5915068407362488 Spearman Correlation: 0.408654151461635 Coefficient of Determination: 0.34980742124426567 RMSE: 0.9080033881435629 NRMSE: 0.14458192225463565 MAPE: 182.08347894241322 Pearson Correlation: 0.40708264198142347 Spearman Correlation: 0.3222032849982008 Coefficient of Determination: 0.13133029087552617 RMSE: 1.0827774211226149 NRMSE: 0.21293139193380956 MAPE: 598.7416130091988 Protein: CDH2 x_train_column_count: 3 x_train columns: ['mRNA_CDH2', 'DNA_CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.008769488982535701 Spearman Correlation: 0.01141726915925398 Coefficient of Determination: 7.690393701498266e-05 RMSE: 0.35912259690955406 NRMSE: 0.17637768130718237 MAPE: 205.6458474562674 Pearson Correlation: -0.015177966815383729 Spearman Correlation: 0.00021576536633355944 Coefficient of Determination: -0.016031740633386082 RMSE: 0.420421632303473 NRMSE: 0.15721692212608604 MAPE: 647.3144736879303 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: RandomForests Pearson Correlation: 0.008678059379396237 Spearman Correlation: 0.01141726915925398 Coefficient of Determination: 4.677597831692637e-05 RMSE: 0.35912800710025344 NRMSE: 0.1763803384412619 MAPE: 206.49010318442808 Pearson Correlation: -0.015177966815383716 Spearman Correlation: 0.00021576536633355944 Coefficient of Determination: -0.016882917135072617 RMSE: 0.4205976987016993 NRMSE: 0.15728276226154078 MAPE: 647.2294033142571 Protein: CDH3 x_train_column_count: 3 x_train columns: ['mRNA_CDH3', 'DNA_CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.020241862221664925 Spearman Correlation: 0.013091590709869979 Coefficient of Determination: 0.0004097329862007282 RMSE: 0.2037260397256243 NRMSE: 0.142929533399018 MAPE: 134.37317238858878 Pearson Correlation: 0.059378247498230965 Spearman Correlation: 0.11203594182474445 Coefficient of Determination: -0.004439073056292653 RMSE: 0.22388742077057153 NRMSE: 0.2019933604332153 MAPE: 106.33802590752587 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: RandomForests Pearson Correlation: 0.020059571192176294 Spearman Correlation: 0.013091590709869979 Coefficient of Determination: 0.00039622914201742354 RMSE: 0.20372741582716114 NRMSE: 0.14293049884040604 MAPE: 137.57524592104338 Pearson Correlation: 0.0533799470781948 Spearman Correlation: 0.11203594182474445 Coefficient of Determination: -0.00503913445992521 RMSE: 0.22395428701693482 NRMSE: 0.20205368779665533 MAPE: 106.83291203322203 Protein: PTEN x_train_column_count: 3 x_train columns: ['mRNA_PTEN', 'DNA_PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 0.21426805299556856 Spearman Correlation: 0.20577930245342738 Coefficient of Determination: 0.045910798534511854 RMSE: 0.5558118520519795 NRMSE: 0.08690670816229841 MAPE: 315.42758025555804 Pearson Correlation: 0.05807430938237243 Spearman Correlation: 0.028573555771428134 Coefficient of Determination: -0.0061747034544386015 RMSE: 0.7239292639797964 NRMSE: 0.14003583719819646 MAPE: 491.36181358313735 Predictor: ElasticNet Pearson Correlation: 0.19454040117022817 Spearman Correlation: 0.20577930245342738 Coefficient of Determination: 0.023233248395452155 RMSE: 0.5623785494235488 NRMSE: 0.08793347657314499 MAPE: 290.9477936566609 Pearson Correlation: 0.06278711309382222 Spearman Correlation: 0.028573555771428134 Coefficient of Determination: -0.001374008005504912 RMSE: 0.7222001809119761 NRMSE: 0.13970136585267257 MAPE: 426.2209526153078 Predictor: RandomForests Pearson Correlation: 0.21427606651712958 Spearman Correlation: 0.20577930245342738 Coefficient of Determination: 0.045903436703680245 RMSE: 0.5558139963928491 NRMSE: 0.08690704345130937 MAPE: 318.0197788912623 Pearson Correlation: 0.05948140019094961 Spearman Correlation: 0.028573555771428134 Coefficient of Determination: -0.005808596475454175 RMSE: 0.7237975474556744 NRMSE: 0.1400103581429268 MAPE: 491.11579726174955 Protein: BRCA2 x_train_column_count: 3 x_train columns: ['mRNA_BRCA2', 'DNA_BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.07696248155109735 Spearman Correlation: 0.0711068658154676 Coefficient of Determination: 0.005923223566502989 RMSE: 0.1998736100748087 NRMSE: 0.1287638009823216 MAPE: 121.68877009247122 Pearson Correlation: -0.029292368594449503 Spearman Correlation: -0.03173479302773576 Coefficient of Determination: -0.1083155909437945 RMSE: 0.17485127858629282 NRMSE: 0.22866838237924908 MAPE: 116.99011422279997 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: RandomForests Pearson Correlation: 0.07695053720152845 Spearman Correlation: 0.0711068658154676 Coefficient of Determination: 0.005874855506411092 RMSE: 0.19987847256703206 NRMSE: 0.12876693352683657 MAPE: 122.91557853427264 Pearson Correlation: -0.0297780408187081 Spearman Correlation: -0.03173479302773576 Coefficient of Determination: -0.11185700335107218 RMSE: 0.1751304078481879 NRMSE: 0.22903342424401738 MAPE: 118.59555909795571 Protein: CDKN2A x_train_column_count: 3 x_train columns: ['mRNA_CDKN2A', 'DNA_CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 0.27846624676936393 Spearman Correlation: 0.2442486716106145 Coefficient of Determination: 0.07754345058981627 RMSE: 0.6528031182859665 NRMSE: 0.16623032728628415 MAPE: 200.9813645751116 Pearson Correlation: 0.07895502166415613 Spearman Correlation: 0.1074393742759553 Coefficient of Determination: -0.040972137465276726 RMSE: 0.6182383895202997 NRMSE: 0.15556689301232976 MAPE: 474.1912853922063 Predictor: ElasticNet Pearson Correlation: 0.2783441735883459 Spearman Correlation: 0.24382111513609742 Coefficient of Determination: 0.07220788277392398 RMSE: 0.654688330777705 NRMSE: 0.16671037935823002 MAPE: 219.1338062438932 Pearson Correlation: 0.08157401431183228 Spearman Correlation: 0.1085281403927035 Coefficient of Determination: -0.011348345049791542 RMSE: 0.6093780411845462 NRMSE: 0.1533373697653673 MAPE: 402.0914591070995 Predictor: RandomForests Pearson Correlation: 0.27843743891870076 Spearman Correlation: 0.2442486716106145 Coefficient of Determination: 0.07751562628713182 RMSE: 0.6528129635489225 NRMSE: 0.1662328342922061 MAPE: 202.16962899578053 Pearson Correlation: 0.08157401431183227 Spearman Correlation: 0.1085281403927035 Coefficient of Determination: -0.03874094908754655 RMSE: 0.6175754773263101 NRMSE: 0.1554000848811832 MAPE: 452.15495171100645 Protein: TP53 x_train_column_count: 3 x_train columns: ['mRNA_TP53', 'DNA_TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.35889894816600737 Spearman Correlation: 0.37797287155939757 Coefficient of Determination: 0.1288084549946661 RMSE: 0.39555833272647595 NRMSE: 0.10060233798582771 MAPE: 828.4194024578607 Pearson Correlation: 0.3830737172108415 Spearman Correlation: 0.31518176618081395 Coefficient of Determination: 0.1333914739200378 RMSE: 0.49166048075269475 NRMSE: 0.1316888926617637 MAPE: 202.54038965711513 Predictor: ElasticNet Pearson Correlation: 0.3574585550891103 Spearman Correlation: 0.3936113463685194 Coefficient of Determination: 0.10954970368504546 RMSE: 0.39990658285986413 NRMSE: 0.10170822830180426 MAPE: 642.7097509738543 Pearson Correlation: 0.39052078543055013 Spearman Correlation: 0.3722018462120896 Coefficient of Determination: 0.10316370197252211 RMSE: 0.5001616757239217 NRMSE: 0.13396589680565735 MAPE: 165.60123262688344 Predictor: RandomForests Pearson Correlation: 0.36287547874427195 Spearman Correlation: 0.38202096882617836 Coefficient of Determination: 0.13164053070389814 RMSE: 0.3949148674259533 NRMSE: 0.10043868547672964 MAPE: 809.3470014283408 Pearson Correlation: 0.3898178879575874 Spearman Correlation: 0.37715733837861753 Coefficient of Determination: 0.13821091994521117 RMSE: 0.4902914457889264 NRMSE: 0.13132220323796073 MAPE: 200.7630631372462 Protein: CTNNB1 x_train_column_count: 3 x_train columns: ['mRNA_CTNNB1', 'DNA_CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.0769616942265186 Spearman Correlation: 0.07135712243935283 Coefficient of Determination: 0.0059231023782161385 RMSE: 0.7537385933298257 NRMSE: 0.14825700104835282 MAPE: 723.2721982919269 Pearson Correlation: -0.08291891324761771 Spearman Correlation: -0.06036259100771083 Coefficient of Determination: -0.022336988830007787 RMSE: 0.685184349684662 NRMSE: 0.21944227008306522 MAPE: 268.7642200235463 Predictor: ElasticNet Pearson Correlation: 0.07683690942388394 Spearman Correlation: 0.07118061553695532 Coefficient of Determination: 0.004901132404781849 RMSE: 0.7541259377775694 NRMSE: 0.14833318996411674 MAPE: 714.998250633927 Pearson Correlation: -0.0829189132476177 Spearman Correlation: -0.06036259100771083 Coefficient of Determination: -0.011301269240112655 RMSE: 0.681476169716499 NRMSE: 0.2182546606018143 MAPE: 269.06244059158826 Predictor: RandomForests Pearson Correlation: 0.07648908523902667 Spearman Correlation: 0.06990458156437408 Coefficient of Determination: 0.005788942929814911 RMSE: 0.7537894534507046 NRMSE: 0.14826700500603945 MAPE: 730.5746322036941 Pearson Correlation: -0.0829189132476177 Spearman Correlation: -0.06036259100771083 Coefficient of Determination: -0.023341817937146958 RMSE: 0.685520992148598 NRMSE: 0.21955008571914397 MAPE: 271.056650140029 Protein: CCNE1 x_train_column_count: 3 x_train columns: ['mRNA_CCNE1', 'DNA_CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.3233320868322436 Spearman Correlation: 0.2872640887403306 Coefficient of Determination: 0.10454363837529357 RMSE: 0.4246864212469759 NRMSE: 0.15126853828921671 MAPE: 105.59066600920461 Pearson Correlation: 0.34378838233808323 Spearman Correlation: 0.32386978998800287 Coefficient of Determination: 0.0979837333096204 RMSE: 0.6155262720237893 NRMSE: 0.1485450857986315 MAPE: 113.74991159010179 Predictor: ElasticNet Pearson Correlation: 0.32330439783418063 Spearman Correlation: 0.28643810370235706 Coefficient of Determination: 0.09995661908997533 RMSE: 0.42577277035248795 NRMSE: 0.15165548365182116 MAPE: 106.49330340293288 Pearson Correlation: 0.34378838233808323 Spearman Correlation: 0.32386978998800287 Coefficient of Determination: 0.08477369300030546 RMSE: 0.6200170850309265 NRMSE: 0.14962885465427672 MAPE: 113.597416822848 Predictor: RandomForests Pearson Correlation: 0.3233292363879225 Spearman Correlation: 0.2872640887403306 Coefficient of Determination: 0.10453313993614399 RMSE: 0.4246889107772725 NRMSE: 0.15126942503197596 MAPE: 105.55768223277482 Pearson Correlation: 0.34378838233808334 Spearman Correlation: 0.32386978998800287 Coefficient of Determination: 0.09846636944205378 RMSE: 0.6153615771177845 NRMSE: 0.14850533994202875 MAPE: 113.75395639749955 Protein: CCND1 x_train_column_count: 3 x_train columns: ['mRNA_CCND1', 'DNA_CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.14328864433236924 Spearman Correlation: 0.15835165483620153 Coefficient of Determination: 0.020531635594608244 RMSE: 0.22526995715242346 NRMSE: 0.14188624732466457 MAPE: 703.4888866263318 Pearson Correlation: 0.0929810460146837 Spearman Correlation: 0.08116021359749367 Coefficient of Determination: 0.0070892373828752575 RMSE: 0.27497903526369266 NRMSE: 0.17568075750609669 MAPE: 255.81443616203546 Predictor: ElasticNet Pearson Correlation: 0.13660876541934233 Spearman Correlation: 0.15280467109694407 Coefficient of Determination: 0.014337501038257261 RMSE: 0.22598113547165777 NRMSE: 0.1423341828779463 MAPE: 696.9890233320709 Pearson Correlation: 0.09298104601468377 Spearman Correlation: 0.08116021359749367 Coefficient of Determination: 0.0053184929634355615 RMSE: 0.27522412309695204 NRMSE: 0.17583734113859523 MAPE: 261.9554146128614 Predictor: RandomForests Pearson Correlation: 0.1423853177709438 Spearman Correlation: 0.15835165483620153 Coefficient of Determination: 0.020269610089870826 RMSE: 0.22530008703166995 NRMSE: 0.1419052246244016 MAPE: 702.8049090813615 Pearson Correlation: 0.09298104601468375 Spearman Correlation: 0.08116021359749367 Coefficient of Determination: 0.007115535159197939 RMSE: 0.27497539375565533 NRMSE: 0.17567843099095035 MAPE: 255.38903954517943 Protein: ERBB2 x_train_column_count: 3 x_train columns: ['mRNA_ERBB2', 'DNA_ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.4908473337717801 Spearman Correlation: 0.464142965476225 Coefficient of Determination: 0.2409311050708649 RMSE: 0.8955710676849596 NRMSE: 0.15257527091417955 MAPE: 1249.3075932851316 Pearson Correlation: 0.41747417652275187 Spearman Correlation: 0.3709026234819203 Coefficient of Determination: 0.13473031129736568 RMSE: 0.8071523075275975 NRMSE: 0.17859327525779345 MAPE: 921.4811640681135 Predictor: ElasticNet Pearson Correlation: 0.4904424909834806 Spearman Correlation: 0.4696076945233392 Coefficient of Determination: 0.23497895473660724 RMSE: 0.8990754693723202 NRMSE: 0.15317230341794644 MAPE: 1112.8323565016433 Pearson Correlation: 0.41733530898255633 Spearman Correlation: 0.37729601735810475 Coefficient of Determination: 0.1534014730446457 RMSE: 0.798396274621261 NRMSE: 0.1766558855230138 MAPE: 805.3861442381359 Predictor: RandomForests Pearson Correlation: 0.4912064989743391 Spearman Correlation: 0.4738396367578983 Coefficient of Determination: 0.24121145762674678 RMSE: 0.8954056684526458 NRMSE: 0.15254709243277267 MAPE: 1226.3206657871654 Pearson Correlation: 0.41716188399054777 Spearman Correlation: 0.3786919454421262 Coefficient of Determination: 0.13701482138591892 RMSE: 0.8060860698366354 NRMSE: 0.17835735586605497 MAPE: 904.9566695548265 Protein: ERBB3 x_train_column_count: 3 x_train columns: ['mRNA_ERBB3', 'DNA_ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.13442265243251555 Spearman Correlation: 0.15307521835015292 Coefficient of Determination: 0.01806944948699285 RMSE: 0.4646544232689645 NRMSE: 0.12539689250458497 MAPE: 238.33520646362692 Pearson Correlation: -0.024207745942915502 Spearman Correlation: -0.03104064098890073 Coefficient of Determination: -0.0774902829279005 RMSE: 0.43282358504510704 NRMSE: 0.20941320326929372 MAPE: 238.650665616243 Predictor: ElasticNet Pearson Correlation: 0.1312422420124189 Spearman Correlation: 0.1495997944055374 Coefficient of Determination: 0.015180430728168215 RMSE: 0.46533747025298616 NRMSE: 0.12558122728101595 MAPE: 240.61500925885775 Pearson Correlation: -0.022142596280975542 Spearman Correlation: -0.03962995070838392 Coefficient of Determination: -0.06366799482989394 RMSE: 0.43003844488270676 NRMSE: 0.20806566782271813 MAPE: 237.80144879016228 Predictor: RandomForests Pearson Correlation: 0.14549499118997272 Spearman Correlation: 0.15634391583606003 Coefficient of Determination: 0.02114458172454403 RMSE: 0.46392626878840615 NRMSE: 0.12520038450949708 MAPE: 238.1640514065522 Pearson Correlation: 0.012881563123625293 Spearman Correlation: -0.02032627256589225 Coefficient of Determination: -0.06825300475252516 RMSE: 0.4309643025260905 NRMSE: 0.20851362588593725 MAPE: 236.6485853888578
Unnormalized
scenario = Scenario.selfmRNA_CNA_Mutations
normalizeTechnique = NormalizeTechnique.UN
X, Y, Z = get_mRNA_DNA_data(normalizeTechnique)
X.head()
| mRNA_RB1 | DNA_RB1 | mRNA_CDH1 | DNA_CDH1 | mRNA_PTEN | DNA_PTEN | mRNA_BRCA2 | DNA_BRCA2 | mRNA_CDKN2A | DNA_CDKN2A | ... | mRNA_CCND1 | DNA_CCND1 | mRNA_CDH2 | DNA_CDH2 | mRNA_CDH3 | DNA_CDH3 | mRNA_ERBB2 | DNA_ERBB2 | mRNA_ERBB3 | DNA_ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 1115.5629 | 0.023 | 16181.6603 | -0.371 | 2284.2479 | 0.347 | 98.5328 | 0.023 | 130.6631 | -0.362 | ... | 3800.3297 | -0.007 | 33.4155 | 0.000 | 1255.6509 | -0.371 | 7976.8748 | -0.018 | 12728.7274 | 0.394 |
| TCGA-A1-A0SH-01 | 1206.9721 | -0.028 | 9711.7551 | -0.458 | 2747.6491 | 0.013 | 94.9831 | -0.028 | 304.4517 | -0.012 | ... | 5316.8889 | 0.021 | 445.6623 | 0.006 | 1028.5627 | -0.458 | 17990.8177 | 0.465 | 7003.4716 | -0.001 |
| TCGA-A1-A0SJ-01 | 1848.0110 | -0.200 | 60487.2428 | 0.436 | 1976.0402 | -0.505 | 236.3054 | 0.355 | 138.6374 | -0.512 | ... | 25027.0690 | 0.887 | 159.8537 | 0.420 | 958.3905 | 0.436 | 9313.9460 | 0.308 | 7384.3621 | -0.357 |
| TCGA-A1-A0SK-01 | 88.8749 | -1.293 | 2826.9776 | -0.757 | 1075.9534 | 0.001 | 893.7914 | 1.015 | 864.1664 | 0.141 | ... | 279.2405 | 0.116 | 1720.7690 | 0.162 | 798.2981 | -0.757 | 303.4983 | -0.274 | 2589.6628 | 0.069 |
| TCGA-A1-A0SQ-01 | 1166.3137 | -0.707 | 30943.4191 | -0.031 | 2453.6561 | -0.007 | 86.3338 | -0.707 | 137.9728 | -0.009 | ... | 84739.9576 | 3.657 | 6263.6409 | 0.004 | 289.2587 | -0.031 | 5585.0731 | -0.059 | 14427.0298 | -0.007 |
5 rows × 26 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 3 x_train columns: ['mRNA_RB1', 'DNA_RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.20326920373261578 Spearman Correlation: 0.27022625031888176 Coefficient of Determination: 0.041318369186091775 RMSE: 0.21942333176816547 NRMSE: 0.08309915991977483 MAPE: 175.04108593233795 Pearson Correlation: 0.28574808792465595 Spearman Correlation: 0.3606135986733002 Coefficient of Determination: 0.025424795321117077 RMSE: 0.2768778973741515 NRMSE: 0.13678183673503086 MAPE: 108.76525992318042 Predictor: ElasticNet Pearson Correlation: 0.19391279737668243 Spearman Correlation: 0.25847504910702246 Coefficient of Determination: 0.037602166880939536 RMSE: 0.21984820316169457 NRMSE: 0.08326006557913067 MAPE: 189.5233272234876 Pearson Correlation: 0.2796279815287011 Spearman Correlation: 0.34967808018729885 Coefficient of Determination: 0.021248651856464407 RMSE: 0.2774704867247404 NRMSE: 0.137074584767907 MAPE: 131.60775066232006 Predictor: RandomForests Pearson Correlation: 0.3348986575549158 Spearman Correlation: 0.38614644335891535 Coefficient of Determination: 0.09768274559867507 RMSE: 0.21287528052354343 NRMSE: 0.08061930714771574 MAPE: 146.763266226592 Pearson Correlation: 0.2869222160124117 Spearman Correlation: 0.28979434635880885 Coefficient of Determination: 0.03053291756937415 RMSE: 0.27615133247182777 NRMSE: 0.13642290276886904 MAPE: 107.41717975855947 Protein: CDH1 x_train_column_count: 3 x_train columns: ['mRNA_CDH1', 'DNA_CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 0.6326631043068565 Spearman Correlation: 0.5680069879672683 Coefficient of Determination: 0.40026260355118837 RMSE: 0.873887981234962 NRMSE: 0.14688921070293345 MAPE: 487.7812518158747 Pearson Correlation: 0.6607881864892997 Spearman Correlation: 0.6431567651936396 Coefficient of Determination: 0.4336632177510208 RMSE: 0.8731918333158549 NRMSE: 0.1414259067273258 MAPE: 291.6497472424512 Predictor: ElasticNet Pearson Correlation: 0.6018194521027365 Spearman Correlation: 0.5718909140617032 Coefficient of Determination: 0.3573483901954706 RMSE: 0.9046133681078262 NRMSE: 0.15205374886252604 MAPE: 594.3537229476527 Pearson Correlation: 0.6200554377041049 Spearman Correlation: 0.6519949273241635 Coefficient of Determination: 0.38328692075446924 RMSE: 0.9112003130594419 NRMSE: 0.147581923659655 MAPE: 333.62176588831176 Predictor: RandomForests Pearson Correlation: 0.7213244570400039 Spearman Correlation: 0.5942373412705858 Coefficient of Determination: 0.5194569362550763 RMSE: 0.7822424099770637 NRMSE: 0.13148478139899883 MAPE: 300.2007646708796 Pearson Correlation: 0.7465998349399987 Spearman Correlation: 0.6562231643594731 Coefficient of Determination: 0.5540542904091961 RMSE: 0.7748422182042797 NRMSE: 0.12549677985881244 MAPE: 150.95901062986337 Protein: CDH2 x_train_column_count: 3 x_train columns: ['mRNA_CDH2', 'DNA_CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.16137180773813012 Spearman Correlation: 0.027332008895292137 Coefficient of Determination: 0.026040860332672167 RMSE: 0.3663294699731344 NRMSE: 0.13533323357720706 MAPE: 299.1399131770609 Pearson Correlation: 0.04697464071038721 Spearman Correlation: 0.09022534386889086 Coefficient of Determination: -0.0002842825448872155 RMSE: 0.3751683058926436 NRMSE: 0.193615268562029 MAPE: 106.76505249316418 Predictor: ElasticNet Pearson Correlation: 0.15002477351668805 Spearman Correlation: 0.021027718948557195 Coefficient of Determination: 0.022507432249068038 RMSE: 0.36699337204107935 NRMSE: 0.13557849916733325 MAPE: 373.6898428330703 Pearson Correlation: 0.10564670001853971 Spearman Correlation: 0.11871524729294705 Coefficient of Determination: 0.008639812591772711 RMSE: 0.3734910134274733 NRMSE: 0.19274965857845555 MAPE: 104.1873778445509 Predictor: RandomForests Pearson Correlation: 0.26964138016702527 Spearman Correlation: 0.2051651401310723 Coefficient of Determination: 0.06625247938190704 RMSE: 0.358687481531217 NRMSE: 0.13251005091903822 MAPE: 443.56812591659616 Pearson Correlation: -0.05647083983751969 Spearman Correlation: -0.05307111869844098 Coefficient of Determination: -0.08421939044811344 RMSE: 0.39059169499782953 NRMSE: 0.2015749058150537 MAPE: 103.7231118172311 Protein: CDH3 x_train_column_count: 3 x_train columns: ['mRNA_CDH3', 'DNA_CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.2486019609306757 Spearman Correlation: 0.3066728575457907 Coefficient of Determination: 0.06180293497857714 RMSE: 0.20224465673949088 NRMSE: 0.14189022895232845 MAPE: 291.81531176067864 Pearson Correlation: 0.4203322928136429 Spearman Correlation: 0.4547702663154814 Coefficient of Determination: 0.16065258119904446 RMSE: 0.1874272020959975 NRMSE: 0.14345638540539107 MAPE: 198.92792755838983 Predictor: ElasticNet Pearson Correlation: 0.24821600086503437 Spearman Correlation: 0.3061115403229242 Coefficient of Determination: 0.06161118266330978 RMSE: 0.20226532345295767 NRMSE: 0.14190472824616776 MAPE: 292.6085090187212 Pearson Correlation: 0.42292751331407674 Spearman Correlation: 0.4640717978733782 Coefficient of Determination: 0.16216875583511714 RMSE: 0.1872578438481901 NRMSE: 0.14332675895951053 MAPE: 198.4467027602953 Predictor: RandomForests Pearson Correlation: 0.3548257336896427 Spearman Correlation: 0.3370143915831307 Coefficient of Determination: 0.12258981740292196 RMSE: 0.1955831140241697 NRMSE: 0.13721664283000062 MAPE: 380.73704270156037 Pearson Correlation: 0.43990580328478923 Spearman Correlation: 0.42447989187064034 Coefficient of Determination: 0.17332189507293716 RMSE: 0.1860072877259621 NRMSE: 0.1423695859396117 MAPE: 336.93805668472237 Protein: PTEN x_train_column_count: 3 x_train columns: ['mRNA_PTEN', 'DNA_PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 0.42885144279730697 Spearman Correlation: 0.4454106128203037 Coefficient of Determination: 0.1839135599893319 RMSE: 0.5659410783727593 NRMSE: 0.08849051338796955 MAPE: 339.9310458756512 Pearson Correlation: 0.34678748200463677 Spearman Correlation: 0.39748804994634673 Coefficient of Determination: 0.09877971822917597 RMSE: 0.47149838163444774 NRMSE: 0.15539462844718466 MAPE: 168.93293793562782 Predictor: ElasticNet Pearson Correlation: 0.40944501177935366 Spearman Correlation: 0.43682645421725247 Coefficient of Determination: 0.1676021426166654 RMSE: 0.5715689314066392 NRMSE: 0.08937048415395812 MAPE: 416.5781177242633 Pearson Correlation: 0.38018229778744417 Spearman Correlation: 0.40467759243000684 Coefficient of Determination: 0.13733496655092126 RMSE: 0.4613025183328284 NRMSE: 0.15203431492084515 MAPE: 164.83341142081525 Predictor: RandomForests Pearson Correlation: 0.46759723416089666 Spearman Correlation: 0.4757615738607167 Coefficient of Determination: 0.21166443514138855 RMSE: 0.5562354924047878 NRMSE: 0.08697294854269216 MAPE: 403.3882700763433 Pearson Correlation: 0.38448427659488543 Spearman Correlation: 0.3978438785411829 Coefficient of Determination: 0.13860303021093945 RMSE: 0.4609633507189638 NRMSE: 0.15192253335935793 MAPE: 189.95741758230454 Protein: BRCA2 x_train_column_count: 3 x_train columns: ['mRNA_BRCA2', 'DNA_BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.032629391273553465 Spearman Correlation: 0.0006863514914322238 Coefficient of Determination: 0.0010646771748825667 RMSE: 0.19750600275601585 NRMSE: 0.12776448239557 MAPE: 120.4199457443768 Pearson Correlation: -0.07897401064425708 Spearman Correlation: -0.04044488396852578 Coefficient of Determination: -0.012446345698319261 RMSE: 0.18588074751809686 NRMSE: 0.1860295711750369 MAPE: 104.18226869116702 Predictor: ElasticNet Pearson Correlation: 0.001680113662234027 Spearman Correlation: -0.003365850045682841 Coefficient of Determination: 2.7358727012760653e-06 RMSE: 0.19761095653249758 NRMSE: 0.12783237585065763 MAPE: 122.61315173587421 Pearson Correlation: -0.08404684070019271 Spearman Correlation: -0.06737887447433855 Coefficient of Determination: -0.004996483180788047 RMSE: 0.18519560363587143 NRMSE: 0.18534387873886254 MAPE: 104.29990341904134 Predictor: RandomForests Pearson Correlation: 0.3526298068096239 Spearman Correlation: 0.30056414048310715 Coefficient of Determination: 0.061867523999622365 RMSE: 0.19140077841881065 NRMSE: 0.12381507925608441 MAPE: 109.76619135322115 Pearson Correlation: 0.014952071204442526 Spearman Correlation: 0.04350164265855809 Coefficient of Determination: -0.006703565908442455 RMSE: 0.18535282313120657 NRMSE: 0.185501224110495 MAPE: 109.7197777560378 Protein: CDKN2A x_train_column_count: 3 x_train columns: ['mRNA_CDKN2A', 'DNA_CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 0.48942788112969776 Spearman Correlation: 0.42242544253713993 Coefficient of Determination: 0.2395396508271055 RMSE: 0.5604753869810942 NRMSE: 0.12670405492960193 MAPE: 162.73729111704765 Pearson Correlation: 0.5966058458325868 Spearman Correlation: 0.5205931128670374 Coefficient of Determination: 0.3539384198584187 RMSE: 0.6003147429436974 NRMSE: 0.16211578259349105 MAPE: 197.61558547102786 Predictor: ElasticNet Pearson Correlation: 0.48586456790755905 Spearman Correlation: 0.46567371986341716 Coefficient of Determination: 0.23604565791967136 RMSE: 0.5617614848003774 NRMSE: 0.12699479706123595 MAPE: 157.60310907304762 Pearson Correlation: 0.5981316130490857 Spearman Correlation: 0.5277046141839821 Coefficient of Determination: 0.3539966077520408 RMSE: 0.6002877084952544 NRMSE: 0.16210848190528068 MAPE: 164.35532129341973 Predictor: RandomForests Pearson Correlation: 0.6041616553068031 Spearman Correlation: 0.5147207277671445 Coefficient of Determination: 0.36449417393181927 RMSE: 0.5123633143972541 NRMSE: 0.11582758322533154 MAPE: 223.198255146617 Pearson Correlation: 0.6756320582291276 Spearman Correlation: 0.5195553010106929 Coefficient of Determination: 0.4427695893058061 RMSE: 0.5575187226724603 NRMSE: 0.15055866126720505 MAPE: 518.4283627487548 Protein: TP53 x_train_column_count: 3 x_train columns: ['mRNA_TP53', 'DNA_TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.5092263411661888 Spearman Correlation: 0.41848196334947646 Coefficient of Determination: 0.2593114665375037 RMSE: 0.38971130016880456 NRMSE: 0.09365808703888599 MAPE: 696.503448133638 Pearson Correlation: 0.5069920231554165 Spearman Correlation: 0.4382743147010049 Coefficient of Determination: 0.25050832377948373 RMSE: 0.36415936653942377 NRMSE: 0.13095018394743566 MAPE: 506.33935148156775 Predictor: ElasticNet Pearson Correlation: 0.48827417549762475 Spearman Correlation: 0.3860968616857523 Coefficient of Determination: 0.23297442599806029 RMSE: 0.39657936253537995 NRMSE: 0.09530866679533286 MAPE: 661.6901488411332 Pearson Correlation: 0.4648562802125833 Spearman Correlation: 0.40597014925373137 Coefficient of Determination: 0.21485871540455392 RMSE: 0.3727193885928684 NRMSE: 0.13402833204821044 MAPE: 624.0515648419995 Predictor: RandomForests Pearson Correlation: 0.5575018974670611 Spearman Correlation: 0.4600966741532721 Coefficient of Determination: 0.2999583480114416 RMSE: 0.37886730497131715 NRMSE: 0.09105198389120817 MAPE: 660.8947648925017 Pearson Correlation: 0.5115748976089421 Spearman Correlation: 0.4910781963197371 Coefficient of Determination: 0.25968208191413633 RMSE: 0.3619238543568273 NRMSE: 0.13014630312374673 MAPE: 341.63644096631134 Protein: CTNNB1 x_train_column_count: 3 x_train columns: ['mRNA_CTNNB1', 'DNA_CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 0.09332202022972683 Spearman Correlation: 0.15755303042235122 Coefficient of Determination: 0.008708999459757338 RMSE: 0.7340178555617521 NRMSE: 0.1479367667456219 MAPE: 627.6931224228314 Pearson Correlation: 0.021845495544680037 Spearman Correlation: -0.017788508438201154 Coefficient of Determination: -0.018418053434899218 RMSE: 0.7578418041543133 NRMSE: 0.18802208211043353 MAPE: 283.27296609436735 Predictor: ElasticNet Pearson Correlation: 0.08898105342822928 Spearman Correlation: 0.14590811000321963 Coefficient of Determination: 0.007917627859243881 RMSE: 0.7343107892201228 NRMSE: 0.14799580571580767 MAPE: 635.7839649126599 Pearson Correlation: -0.0024019468238157377 Spearman Correlation: -0.034040581406692035 Coefficient of Determination: -0.022319025688373184 RMSE: 0.7592918443713178 NRMSE: 0.1883818400167017 MAPE: 284.0572113694304 Predictor: RandomForests Pearson Correlation: 0.3432577291833069 Spearman Correlation: 0.32369182703566096 Coefficient of Determination: 0.08676744814662607 RMSE: 0.7045255287599905 NRMSE: 0.14199277037305572 MAPE: 604.0103210011451 Pearson Correlation: -0.045339634803406755 Spearman Correlation: -0.039027616132749444 Coefficient of Determination: -0.060222504170715396 RMSE: 0.7732394845051255 NRMSE: 0.19184227770186213 MAPE: 379.12560157773413 Protein: CCNE1 x_train_column_count: 3 x_train columns: ['mRNA_CCNE1', 'DNA_CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.7228799688694011 Spearman Correlation: 0.7012303297288327 Coefficient of Determination: 0.5225554493926261 RMSE: 0.3342040150181911 NRMSE: 0.08065352583878926 MAPE: 92.66847666958512 Pearson Correlation: 0.7574252905876397 Spearman Correlation: 0.6898839137645107 Coefficient of Determination: 0.5203118095417643 RMSE: 0.3719513703680664 NRMSE: 0.13248490485060246 MAPE: 53.054619079398535 Predictor: ElasticNet Pearson Correlation: 0.7219395993512734 Spearman Correlation: 0.7131090453751777 Coefficient of Determination: 0.5211967831854369 RMSE: 0.33467920016928354 NRMSE: 0.08076820237210308 MAPE: 91.95910751284202 Pearson Correlation: 0.7713064884061223 Spearman Correlation: 0.7106623744024974 Coefficient of Determination: 0.5218168547808681 RMSE: 0.371367404113164 NRMSE: 0.13227690262267638 MAPE: 54.38379352439229 Predictor: RandomForests Pearson Correlation: 0.8583409435301661 Spearman Correlation: 0.7205259681179281 Coefficient of Determination: 0.7312774662682309 RMSE: 0.2507276530885667 NRMSE: 0.06050815770653443 MAPE: 54.067381214004286 Pearson Correlation: 0.8219395862432949 Spearman Correlation: 0.7051977409418355 Coefficient of Determination: 0.6753801857024391 RMSE: 0.30598079049312005 NRMSE: 0.10898692448552806 MAPE: 49.012415037783356 Protein: CCND1 x_train_column_count: 3 x_train columns: ['mRNA_CCND1', 'DNA_CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 0.4047788713220998 Spearman Correlation: 0.3765251379701422 Coefficient of Determination: 0.16384593466879294 RMSE: 0.21844816801096514 NRMSE: 0.13132472136379578 MAPE: 343.5497360598718 Pearson Correlation: 0.47623888184594454 Spearman Correlation: 0.46304750756023805 Coefficient of Determination: 0.10601865621769091 RMSE: 0.22214406935133277 NRMSE: 0.15821325661738134 MAPE: 1127.5581988167357 Predictor: ElasticNet Pearson Correlation: 0.4014769912379663 Spearman Correlation: 0.3731637827526827 Coefficient of Determination: 0.16118377448506616 RMSE: 0.2187956409782004 NRMSE: 0.1315336120632194 MAPE: 347.3103752911429 Pearson Correlation: 0.4722252539569458 Spearman Correlation: 0.4734221051604722 Coefficient of Determination: 0.0852166238226677 RMSE: 0.22471373966489103 NRMSE: 0.16004340184668325 MAPE: 1097.9036461892458 Predictor: RandomForests Pearson Correlation: 0.4690056136004898 Spearman Correlation: 0.4039306298985853 Coefficient of Determination: 0.21318648384576055 RMSE: 0.21190497841461634 NRMSE: 0.1273911449992283 MAPE: 314.873635695826 Pearson Correlation: 0.511752113664257 Spearman Correlation: 0.46486934141170444 Coefficient of Determination: 0.26107166697014894 RMSE: 0.201962926432947 NRMSE: 0.14384004218630492 MAPE: 1141.4580559848046 Protein: ERBB2 x_train_column_count: 3 x_train columns: ['mRNA_ERBB2', 'DNA_ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 0.8299714239121486 Spearman Correlation: 0.6256632053976661 Coefficient of Determination: 0.6888525645107597 RMSE: 0.5684806897383323 NRMSE: 0.09685004169520288 MAPE: 291.2746898096902 Pearson Correlation: 0.7921851259735397 Spearman Correlation: 0.5722807530972589 Coefficient of Determination: 0.6197226252175041 RMSE: 0.5593413363459019 NRMSE: 0.10371617584756201 MAPE: 288.3182066562812 Predictor: ElasticNet Pearson Correlation: 0.8276022162080371 Spearman Correlation: 0.6296819299207818 Coefficient of Determination: 0.6845559617064145 RMSE: 0.5723922779262873 NRMSE: 0.09751644512092396 MAPE: 288.5168509853102 Pearson Correlation: 0.7962533435519986 Spearman Correlation: 0.5935469710272169 Coefficient of Determination: 0.6252878529078858 RMSE: 0.5552333678982618 NRMSE: 0.10295445353203446 MAPE: 275.44010560736115 Predictor: RandomForests Pearson Correlation: 0.84260378140247 Spearman Correlation: 0.6511641873981912 Coefficient of Determination: 0.7085731918046572 RMSE: 0.550170568575965 NRMSE: 0.09373061120261088 MAPE: 409.833532108463 Pearson Correlation: 0.800573834774456 Spearman Correlation: 0.6839862179333472 Coefficient of Determination: 0.6316305147340051 RMSE: 0.5505141620332454 NRMSE: 0.10207939218120628 MAPE: 293.3346995341213 Protein: ERBB3 x_train_column_count: 3 x_train columns: ['mRNA_ERBB3', 'DNA_ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.406476224875317 Spearman Correlation: 0.44252263799339286 Coefficient of Determination: 0.16522292138888917 RMSE: 0.4194967651461704 NRMSE: 0.11321013667528557 MAPE: 201.6235274916139 Pearson Correlation: 0.4080554527103394 Spearman Correlation: 0.45286368752312417 Coefficient of Determination: 0.1632265636637812 RMSE: 0.4258350723995506 NRMSE: 0.17086987689375904 MAPE: 198.80322557353688 Predictor: ElasticNet Pearson Correlation: 0.40021079138717147 Spearman Correlation: 0.4461608353851102 Coefficient of Determination: 0.16016867751350838 RMSE: 0.42076479189714844 NRMSE: 0.1135523407009498 MAPE: 200.2441254891731 Pearson Correlation: 0.4241326159508129 Spearman Correlation: 0.47324952839944506 Coefficient of Determination: 0.1757020601130055 RMSE: 0.42264875350148234 NRMSE: 0.1695913398423385 MAPE: 193.8899861081272 Predictor: RandomForests Pearson Correlation: 0.48996065959677 Spearman Correlation: 0.4663514535695274 Coefficient of Determination: 0.23831379250766205 RMSE: 0.4007111288442711 NRMSE: 0.1081404326156388 MAPE: 241.91682788049184 Pearson Correlation: 0.4307955532871659 Spearman Correlation: 0.47561773636705074 Coefficient of Determination: 0.17680156289238458 RMSE: 0.42236678109616 NRMSE: 0.16947819606131226 MAPE: 271.2299089364279 Fold: 2 Protein: RB1 x_train_column_count: 3 x_train columns: ['mRNA_RB1', 'DNA_RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.25982154799993096 Spearman Correlation: 0.3307634998978648 Coefficient of Determination: 0.06750723680508053 RMSE: 0.2269690375258903 NRMSE: 0.08300506053462928 MAPE: 209.28102304154487 Pearson Correlation: 0.053190262637052135 Spearman Correlation: 0.10110720905277534 Coefficient of Determination: -0.05266995676771424 RMSE: 0.2512708208520738 NRMSE: 0.14396009032328827 MAPE: 277.7602628080281 Predictor: ElasticNet Pearson Correlation: 0.24789230471088966 Spearman Correlation: 0.3159366197816136 Coefficient of Determination: 0.0614505891752305 RMSE: 0.22770493950541615 NRMSE: 0.08327418794083388 MAPE: 202.68623360781214 Pearson Correlation: 0.05322314385144897 Spearman Correlation: 0.10746268656716418 Coefficient of Determination: -0.04575272809607256 RMSE: 0.25044389383155213 NRMSE: 0.14348632067442343 MAPE: 328.60979867665503 Predictor: RandomForests Pearson Correlation: 0.3593880562044696 Spearman Correlation: 0.41281497651433136 Coefficient of Determination: 0.11859992967643984 RMSE: 0.22066345886362956 NRMSE: 0.08069904142174868 MAPE: 210.33895035749302 Pearson Correlation: 0.11225072097267615 Spearman Correlation: 0.10809789138175945 Coefficient of Determination: -0.01837941833127621 RMSE: 0.24714438680480813 NRMSE: 0.14159594069324755 MAPE: 297.3746238915008 Protein: CDH1 x_train_column_count: 3 x_train columns: ['mRNA_CDH1', 'DNA_CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.6321421347087325 Spearman Correlation: 0.5495152531665776 Coefficient of Determination: 0.3996036784741134 RMSE: 0.8682975901687989 NRMSE: 0.13929535416199548 MAPE: 415.0167837032383 Pearson Correlation: 0.6470288848328499 Spearman Correlation: 0.697312457321237 Coefficient of Determination: 0.39098114955052476 RMSE: 0.8979398739929576 NRMSE: 0.15946366080500046 MAPE: 262.94226429191514 Predictor: ElasticNet Pearson Correlation: 0.5952777787913885 Spearman Correlation: 0.5477853872007742 Coefficient of Determination: 0.3481370097375044 RMSE: 0.9047482392339897 NRMSE: 0.1451428955216154 MAPE: 545.2285125116503 Pearson Correlation: 0.6576350535063045 Spearman Correlation: 0.6881767632426106 Coefficient of Determination: 0.3820427415970804 RMSE: 0.9045052845916907 NRMSE: 0.1606296012416428 MAPE: 250.1130327984529 Predictor: RandomForests Pearson Correlation: 0.7478990504872847 Spearman Correlation: 0.6003377168530657 Coefficient of Determination: 0.557901737723171 RMSE: 0.7450904350251761 NRMSE: 0.1195300288802721 MAPE: 197.808680347168 Pearson Correlation: 0.6516125561974146 Spearman Correlation: 0.7058225540220889 Coefficient of Determination: 0.38812580542004294 RMSE: 0.9000423780210769 NRMSE: 0.1598370410266519 MAPE: 245.9722700826954 Protein: CDH2 x_train_column_count: 3 x_train columns: ['mRNA_CDH2', 'DNA_CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.14938620447186002 Spearman Correlation: 0.04481920699168721 Coefficient of Determination: 0.022316238086508178 RMSE: 0.3639678275852451 NRMSE: 0.13188195796262234 MAPE: 343.8512107378153 Pearson Correlation: 0.13149888837385415 Spearman Correlation: 0.05064871719832212 Coefficient of Determination: 0.016700069717749066 RMSE: 0.3838346346330534 NRMSE: 0.2022129917937031 MAPE: 121.20230431889176 Predictor: ElasticNet Pearson Correlation: 0.1470313787581837 Spearman Correlation: 0.03346468965108404 Coefficient of Determination: 0.021618225886850806 RMSE: 0.36409773086526487 NRMSE: 0.1319290277792829 MAPE: 381.9573351533159 Pearson Correlation: 0.11717867760285976 Spearman Correlation: 0.063681592039801 Coefficient of Determination: 0.012876554839764243 RMSE: 0.3845801719240886 NRMSE: 0.2026057581376213 MAPE: 121.674712278187 Predictor: RandomForests Pearson Correlation: 0.23269711502162294 Spearman Correlation: 0.1783552138486899 Coefficient of Determination: 0.046284439956497114 RMSE: 0.35947875554582365 NRMSE: 0.1302553647169446 MAPE: 407.5716373044224 Pearson Correlation: 0.19590961313749478 Spearman Correlation: 0.1023977451092562 Coefficient of Determination: 0.037813287597198486 RMSE: 0.37969146366717804 NRMSE: 0.20003027319322192 MAPE: 125.00119717504997 Protein: CDH3 x_train_column_count: 3 x_train columns: ['mRNA_CDH3', 'DNA_CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.3353915674508605 Spearman Correlation: 0.350065975213623 Coefficient of Determination: 0.11248750351714532 RMSE: 0.19567608833236516 NRMSE: 0.14726550038936814 MAPE: 272.2177230869883 Pearson Correlation: 0.08053707455148887 Spearman Correlation: 0.16048190420446787 Coefficient of Determination: -0.20288164561325783 RMSE: 0.21707888346885532 NRMSE: 0.17862164360146082 MAPE: 646.4624885962169 Predictor: ElasticNet Pearson Correlation: 0.33037645723903114 Spearman Correlation: 0.3550272027884919 Coefficient of Determination: 0.1091486031387211 RMSE: 0.19604381816019675 NRMSE: 0.1475422532494914 MAPE: 270.98648892029274 Pearson Correlation: 0.10770672491069783 Spearman Correlation: 0.25419471271095506 Coefficient of Determination: -0.181127467183138 RMSE: 0.21510698575542458 NRMSE: 0.17699908315265747 MAPE: 624.4458908770081 Predictor: RandomForests Pearson Correlation: 0.42423575986792816 Spearman Correlation: 0.3900920743897405 Coefficient of Determination: 0.17872988250879573 RMSE: 0.18823203180742976 NRMSE: 0.14166311576274318 MAPE: 417.9297769450251 Pearson Correlation: 0.13033387649362008 Spearman Correlation: 0.22635278212279497 Coefficient of Determination: -0.22105868202915246 RMSE: 0.21871289945196223 NRMSE: 0.17996618073888115 MAPE: 756.7517940538664 Protein: PTEN x_train_column_count: 3 x_train columns: ['mRNA_PTEN', 'DNA_PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.430308333743975 Spearman Correlation: 0.4633292902892238 Coefficient of Determination: 0.18516526208951634 RMSE: 0.5630475366114667 NRMSE: 0.08803807937009876 MAPE: 291.9436706305026 Pearson Correlation: 0.39376710515770297 Spearman Correlation: 0.34454687347575846 Coefficient of Determination: 0.09129103759274892 RMSE: 0.48771773476180375 NRMSE: 0.16357584342695325 MAPE: 582.5515737502983 Predictor: ElasticNet Pearson Correlation: 0.4151746368356307 Spearman Correlation: 0.45374578789299946 Coefficient of Determination: 0.1723647813852327 RMSE: 0.5674528433819718 NRMSE: 0.08872689287498581 MAPE: 335.60138644356726 Pearson Correlation: 0.36674435243085834 Spearman Correlation: 0.325480440932592 Coefficient of Determination: 0.08565880402805925 RMSE: 0.4892268521049171 NRMSE: 0.16408198688788475 MAPE: 688.128824538588 Predictor: RandomForests Pearson Correlation: 0.4822582186220226 Spearman Correlation: 0.4976141801724072 Coefficient of Determination: 0.22618424042930263 RMSE: 0.5486925710344498 NRMSE: 0.0857935378054022 MAPE: 279.1217603166806 Pearson Correlation: 0.331205192778205 Spearman Correlation: 0.32553763483158277 Coefficient of Determination: 0.06697912535133244 RMSE: 0.4941989547437926 NRMSE: 0.16574958235302947 MAPE: 614.5946555477958 Protein: BRCA2 x_train_column_count: 3 x_train columns: ['mRNA_BRCA2', 'DNA_BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.04354041876643128 Spearman Correlation: 0.06411070678083816 Coefficient of Determination: 0.0018957680663561627 RMSE: 0.19513916273414944 NRMSE: 0.12571374632575258 MAPE: 115.5200051763763 Pearson Correlation: -0.0806903642511729 Spearman Correlation: -0.14521997853867918 Coefficient of Determination: -0.02726013318850118 RMSE: 0.19580321210540141 NRMSE: 0.1325385743912338 MAPE: 119.78626761553632 Predictor: ElasticNet Pearson Correlation: 0.040011582892672495 Spearman Correlation: 0.057472501576392276 Coefficient of Determination: 0.0016008465227753677 RMSE: 0.19516799063136472 NRMSE: 0.12573231801022047 MAPE: 118.03800547130696 Pearson Correlation: -0.07561513606008484 Spearman Correlation: -0.13059701492537315 Coefficient of Determination: -0.024457586349982297 RMSE: 0.1955359368375128 NRMSE: 0.13235765660855245 MAPE: 118.73387411095851 Predictor: RandomForests Pearson Correlation: 0.31837116622984524 Spearman Correlation: 0.25297712500825525 Coefficient of Determination: 0.05748979162848611 RMSE: 0.18962671436720638 NRMSE: 0.12216248308404341 MAPE: 117.7479947447335 Pearson Correlation: 0.10607787603541902 Spearman Correlation: 0.06965814781536116 Coefficient of Determination: -0.0061726239368167235 RMSE: 0.19378307514694146 NRMSE: 0.13117115007949576 MAPE: 109.48070301629664 Protein: CDKN2A x_train_column_count: 3 x_train columns: ['mRNA_CDKN2A', 'DNA_CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.5114269887242209 Spearman Correlation: 0.421390017782988 Coefficient of Determination: 0.2615575647955245 RMSE: 0.570030095136938 NRMSE: 0.1288640432094355 MAPE: 165.43474584850844 Pearson Correlation: 0.5556238442766468 Spearman Correlation: 0.5176421812506098 Coefficient of Determination: 0.2961056244704645 RMSE: 0.5649990242763138 NRMSE: 0.15263643404914462 MAPE: 188.81134911787126 Predictor: ElasticNet Pearson Correlation: 0.5079592237508412 Spearman Correlation: 0.4605769102608491 Coefficient of Determination: 0.2580110529438223 RMSE: 0.571397295138184 NRMSE: 0.12917311973283235 MAPE: 169.699839426674 Pearson Correlation: 0.5649745098036628 Spearman Correlation: 0.5502292459272268 Coefficient of Determination: 0.297490086525957 RMSE: 0.5644431136555621 NRMSE: 0.15248625287863685 MAPE: 178.1806753259505 Predictor: RandomForests Pearson Correlation: 0.6099109413701264 Spearman Correlation: 0.4890325719324427 Coefficient of Determination: 0.37084429209229297 RMSE: 0.5261608528001954 NRMSE: 0.11894672833733363 MAPE: 258.92294088634793 Pearson Correlation: 0.6814150338271348 Spearman Correlation: 0.5686824725091613 Coefficient of Determination: 0.44683974780220026 RMSE: 0.500863556855956 NRMSE: 0.1353100164404463 MAPE: 210.33707010811864 Protein: TP53 x_train_column_count: 3 x_train columns: ['mRNA_TP53', 'DNA_TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 0.5089851407935634 Spearman Correlation: 0.4318947211131587 Coefficient of Determination: 0.2590658735486435 RMSE: 0.39193020494550723 NRMSE: 0.10497661843993766 MAPE: 342.22466043688473 Pearson Correlation: 0.5108069242821148 Spearman Correlation: 0.4486684225929178 Coefficient of Determination: 0.25353443402639964 RMSE: 0.35370012110640336 NRMSE: 0.11648283257250233 MAPE: 1890.2813927619231 Predictor: ElasticNet Pearson Correlation: 0.48808735716447543 Spearman Correlation: 0.4097229814069628 Coefficient of Determination: 0.2305886921085285 RMSE: 0.39939094825340093 NRMSE: 0.10697494261507993 MAPE: 359.24105898732586 Pearson Correlation: 0.5197094728321634 Spearman Correlation: 0.39179592234903915 Coefficient of Determination: 0.2650082921630701 RMSE: 0.3509712470758498 NRMSE: 0.11558414196471259 MAPE: 1769.3417049942798 Predictor: RandomForests Pearson Correlation: 0.5650362928773421 Spearman Correlation: 0.49644063857988907 Coefficient of Determination: 0.31189271803654317 RMSE: 0.37770002396838825 NRMSE: 0.10116513297666754 MAPE: 417.0528880928532 Pearson Correlation: 0.5339125318635124 Spearman Correlation: 0.42117820261233396 Coefficient of Determination: 0.27747543880771175 RMSE: 0.3479818771870137 NRMSE: 0.11459966316055117 MAPE: 1960.7005380272312 Protein: CTNNB1 x_train_column_count: 3 x_train columns: ['mRNA_CTNNB1', 'DNA_CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.10148571420360308 Spearman Correlation: 0.1309787120425295 Coefficient of Determination: 0.010299350187415568 RMSE: 0.7212404940853105 NRMSE: 0.14186477066980932 MAPE: 590.4196344581454 Pearson Correlation: 0.06390237276745706 Spearman Correlation: 0.01468637206126232 Coefficient of Determination: -0.13222004207433025 RMSE: 0.8156370677085635 NRMSE: 0.2029907338564405 MAPE: 176.65526040894872 Predictor: ElasticNet Pearson Correlation: 0.07553563609961043 Spearman Correlation: 0.13031289610192956 Coefficient of Determination: 0.005631842596171999 RMSE: 0.7229392076134069 NRMSE: 0.1421989000026371 MAPE: 605.1796269038845 Pearson Correlation: 0.1322671857591852 Spearman Correlation: 0.13610379475173157 Coefficient of Determination: -0.1124252630552971 RMSE: 0.8084756739194415 NRMSE: 0.20120845024251302 MAPE: 212.52463576364224 Predictor: RandomForests Pearson Correlation: 0.3190111485131608 Spearman Correlation: 0.2990164726438582 Coefficient of Determination: 0.07674871349886081 RMSE: 0.6966074828316737 NRMSE: 0.13701956782684377 MAPE: 629.8261580498948 Pearson Correlation: 0.02184443404140938 Spearman Correlation: 0.08434478568208267 Coefficient of Determination: -0.15739411147330018 RMSE: 0.8246547592367274 NRMSE: 0.20523500142772141 MAPE: 562.1596295599475 Protein: CCNE1 x_train_column_count: 3 x_train columns: ['mRNA_CCNE1', 'DNA_CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.7307115117358941 Spearman Correlation: 0.6957595752060368 Coefficient of Determination: 0.533939313383356 RMSE: 0.3500794461341022 NRMSE: 0.08448474699763549 MAPE: 91.5157175625092 Pearson Correlation: 0.7731113386348979 Spearman Correlation: 0.7420446785679446 Coefficient of Determination: 0.46307922624261333 RMSE: 0.30648926848844626 NRMSE: 0.16657115989132892 MAPE: 56.197328942013044 Predictor: ElasticNet Pearson Correlation: 0.7299247116090841 Spearman Correlation: 0.7061567494715154 Coefficient of Determination: 0.5327900830485114 RMSE: 0.35051080005511764 NRMSE: 0.08458884573089694 MAPE: 90.83745445923547 Pearson Correlation: 0.77702707025648 Spearman Correlation: 0.7531411569602966 Coefficient of Determination: 0.46746331306349276 RMSE: 0.30523542458603403 NRMSE: 0.16588971928436244 MAPE: 56.09733643316592 Predictor: RandomForests Pearson Correlation: 0.8576015896223816 Spearman Correlation: 0.7101682702645096 Coefficient of Determination: 0.7315699874654313 RMSE: 0.26568125478367666 NRMSE: 0.06411691357571173 MAPE: 67.82534859215743 Pearson Correlation: 0.8352160796597063 Spearman Correlation: 0.7370836679134409 Coefficient of Determination: 0.6942453932120536 RMSE: 0.23128457717338924 NRMSE: 0.12569882291392304 MAPE: 40.51900629093152 Protein: CCND1 x_train_column_count: 3 x_train columns: ['mRNA_CCND1', 'DNA_CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.43827829198653606 Spearman Correlation: 0.3720896586378001 Coefficient of Determination: 0.19208786122663546 RMSE: 0.21459250255865517 NRMSE: 0.12900680679482943 MAPE: 557.5215311736496 Pearson Correlation: 0.26793008590807127 Spearman Correlation: 0.3661593990830163 Coefficient of Determination: 0.05985053919515282 RMSE: 0.2282756314682824 NRMSE: 0.17660737719586123 MAPE: 329.67643302543075 Predictor: ElasticNet Pearson Correlation: 0.43264797699106744 Spearman Correlation: 0.38342174166772586 Coefficient of Determination: 0.18713818508732305 RMSE: 0.21524884962060964 NRMSE: 0.12940138366775056 MAPE: 547.1756552544041 Pearson Correlation: 0.28314917185542177 Spearman Correlation: 0.3785679445907717 Coefficient of Determination: 0.07485180568157412 RMSE: 0.22644709566018398 NRMSE: 0.17519271496888655 MAPE: 340.0622648598379 Predictor: RandomForests Pearson Correlation: 0.5040707623731179 Spearman Correlation: 0.41626162506331177 Coefficient of Determination: 0.24934033281191292 RMSE: 0.206849282485278 NRMSE: 0.12435180681083431 MAPE: 488.9863622367476 Pearson Correlation: 0.32093332535895036 Spearman Correlation: 0.3843632172233007 Coefficient of Determination: 0.09288217954551525 RMSE: 0.22422960484198548 NRMSE: 0.17347713440148657 MAPE: 339.17834391246726 Protein: ERBB2 x_train_column_count: 3 x_train columns: ['mRNA_ERBB2', 'DNA_ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.8201830410950421 Spearman Correlation: 0.6324311838599934 Coefficient of Determination: 0.6727002208999119 RMSE: 0.5623804677776287 NRMSE: 0.10092429836470196 MAPE: 231.91996389554666 Pearson Correlation: 0.8392149687865019 Spearman Correlation: 0.5356648131889573 Coefficient of Determination: 0.6959840904505592 RMSE: 0.5829159880050229 NRMSE: 0.09930933233470585 MAPE: 517.3102897766526 Predictor: ElasticNet Pearson Correlation: 0.817998497124707 Spearman Correlation: 0.6397363672646008 Coefficient of Determination: 0.6686945841282023 RMSE: 0.5658113307441028 NRMSE: 0.1015399979800267 MAPE: 221.63912439152332 Pearson Correlation: 0.8410332316468278 Spearman Correlation: 0.5461467173934251 Coefficient of Determination: 0.6955091778826406 RMSE: 0.5833711057992633 NRMSE: 0.09938686914139791 MAPE: 571.6292391805121 Predictor: RandomForests Pearson Correlation: 0.8393681646532969 Spearman Correlation: 0.6676315422093884 Coefficient of Determination: 0.702884506830249 RMSE: 0.5358213595112853 NRMSE: 0.09615802442641015 MAPE: 278.44547541829206 Pearson Correlation: 0.8260087732684012 Spearman Correlation: 0.5016052552161129 Coefficient of Determination: 0.6598165722013368 RMSE: 0.6166154296199134 NRMSE: 0.10505058684769468 MAPE: 1435.1249821672902 Protein: ERBB3 x_train_column_count: 3 x_train columns: ['mRNA_ERBB3', 'DNA_ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.414178584513212 Spearman Correlation: 0.45631530527777064 Coefficient of Determination: 0.1715438998693679 RMSE: 0.4051581685053786 NRMSE: 0.10934056098291947 MAPE: 181.64925990782854 Pearson Correlation: 0.3774999830564038 Spearman Correlation: 0.442722661203785 Coefficient of Determination: 0.13868797504756547 RMSE: 0.48053136573112826 NRMSE: 0.17734467787788125 MAPE: 301.680183458183 Predictor: ElasticNet Pearson Correlation: 0.41402025545880733 Spearman Correlation: 0.4574811032948563 Coefficient of Determination: 0.1714127718976779 RMSE: 0.4051902314395225 NRMSE: 0.10934921384858667 MAPE: 181.8364397390754 Pearson Correlation: 0.3821239191505737 Spearman Correlation: 0.4416544727343674 Coefficient of Determination: 0.1427835180208894 RMSE: 0.4793875398664385 NRMSE: 0.17692253804687738 MAPE: 302.11866059431134 Predictor: RandomForests Pearson Correlation: 0.4948025282576432 Spearman Correlation: 0.47521126721943224 Coefficient of Determination: 0.24314163899124053 RMSE: 0.3872551086637604 NRMSE: 0.10450903897852645 MAPE: 215.727702415682 Pearson Correlation: 0.43715709398351393 Spearman Correlation: 0.44368045103374026 Coefficient of Determination: 0.18883583916108804 RMSE: 0.46633269199872135 NRMSE: 0.1721045220858954 MAPE: 359.6369033984502 Fold: 3 Protein: RB1 x_train_column_count: 3 x_train columns: ['mRNA_RB1', 'DNA_RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.20906181056089132 Spearman Correlation: 0.2900890900991774 Coefficient of Determination: 0.04370684063499808 RMSE: 0.2352648861406256 NRMSE: 0.08603894314680574 MAPE: 185.9339334854555 Pearson Correlation: 0.23642252835836428 Spearman Correlation: 0.27571665482113245 Coefficient of Determination: 0.03360085360225573 RMSE: 0.21790918378871962 NRMSE: 0.15290370334754452 MAPE: 235.6961917274902 Predictor: ElasticNet Pearson Correlation: 0.20536425783313839 Spearman Correlation: 0.28181864803860485 Coefficient of Determination: 0.042174472765042936 RMSE: 0.23545330537322096 NRMSE: 0.08610785012186255 MAPE: 195.91589312380776 Pearson Correlation: 0.2109008845607475 Spearman Correlation: 0.26769161710245765 Coefficient of Determination: 0.022121589206348546 RMSE: 0.2191995681381372 NRMSE: 0.1538091472684348 MAPE: 232.66458705877477 Predictor: RandomForests Pearson Correlation: 0.3321065040765646 Spearman Correlation: 0.37000241697336483 Coefficient of Determination: 0.09722693205103905 RMSE: 0.22858666167497887 NRMSE: 0.08359664338610989 MAPE: 259.4458534331437 Pearson Correlation: 0.2471487436785542 Spearman Correlation: 0.2760265866342014 Coefficient of Determination: 0.03325788540187469 RMSE: 0.2179478475702707 NRMSE: 0.15293083316044084 MAPE: 208.52805085302873 Protein: CDH1 x_train_column_count: 3 x_train columns: ['mRNA_CDH1', 'DNA_CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.6328183131710179 Spearman Correlation: 0.6075465134823047 Coefficient of Determination: 0.4004590174846122 RMSE: 0.9095770982875896 NRMSE: 0.14483250506155687 MAPE: 508.3264784302216 Pearson Correlation: 0.6721696534233547 Spearman Correlation: 0.4740682552151524 Coefficient of Determination: 0.4366092512918812 RMSE: 0.7067138028288735 NRMSE: 0.13893638242222184 MAPE: 238.4838938410048 Predictor: ElasticNet Pearson Correlation: 0.6055447645843435 Spearman Correlation: 0.6074412478462831 Coefficient of Determination: 0.3622391599083423 RMSE: 0.9381213154655974 NRMSE: 0.14937761782516437 MAPE: 617.9843169977449 Pearson Correlation: 0.6253616097400395 Spearman Correlation: 0.47403832965498327 Coefficient of Determination: 0.3587715002241385 RMSE: 0.7539544802198712 NRMSE: 0.1482236622144205 MAPE: 297.0774706921071 Predictor: RandomForests Pearson Correlation: 0.7276193835823498 Spearman Correlation: 0.6282039002441692 Coefficient of Determination: 0.52828658097083 RMSE: 0.8068061403091166 NRMSE: 0.12846822399113347 MAPE: 278.7769631566057 Pearson Correlation: 0.7454686209002703 Spearman Correlation: 0.4734637054013533 Coefficient of Determination: 0.5527506644339515 RMSE: 0.6296708231298473 NRMSE: 0.12379011975186714 MAPE: 177.4955738279887 Protein: CDH2 x_train_column_count: 3 x_train columns: ['mRNA_CDH2', 'DNA_CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.14931543567140945 Spearman Correlation: 0.032234905130690474 Coefficient of Determination: 0.022295099329742607 RMSE: 0.3769641419583058 NRMSE: 0.1365911087608906 MAPE: 217.61934702434132 Pearson Correlation: 0.12832620363829544 Spearman Correlation: 0.09770944774872506 Coefficient of Determination: 0.012369155985872848 RMSE: 0.3299189033662857 NRMSE: 0.17383549189953304 MAPE: 391.30515551810157 Predictor: ElasticNet Pearson Correlation: 0.1426127701108289 Spearman Correlation: -0.004338932550925531 Coefficient of Determination: 0.020338401793236205 RMSE: 0.3773411658082241 NRMSE: 0.13672772150453805 MAPE: 205.28883418090302 Pearson Correlation: 0.1451886540719864 Spearman Correlation: 0.23133206149702618 Coefficient of Determination: 0.013955124643386663 RMSE: 0.3296538998624512 NRMSE: 0.17369586057203365 MAPE: 675.7746684015143 Predictor: RandomForests Pearson Correlation: 0.2998198410354794 Spearman Correlation: 0.258562062688629 Coefficient of Determination: 0.06758489183196303 RMSE: 0.36812964803246534 NRMSE: 0.13338997319822646 MAPE: 341.91459703673723 Pearson Correlation: 0.04176693579977203 Spearman Correlation: -0.08903516048931652 Coefficient of Determination: -0.014694324799197522 RMSE: 0.3344086429085208 NRMSE: 0.17620115229019792 MAPE: 273.40185165838665 Protein: CDH3 x_train_column_count: 3 x_train columns: ['mRNA_CDH3', 'DNA_CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.3037049619355422 Spearman Correlation: 0.33579287082700443 Coefficient of Determination: 0.09223670390426908 RMSE: 0.20247300005295082 NRMSE: 0.1420504294023621 MAPE: 364.23473729610333 Pearson Correlation: 0.2243437722100556 Spearman Correlation: 0.2938714946570406 Coefficient of Determination: 0.02269108262028885 RMSE: 0.1861793243256984 NRMSE: 0.16194153481059642 MAPE: 148.21390169787853 Predictor: ElasticNet Pearson Correlation: 0.3026146976584992 Spearman Correlation: 0.3386347347546788 Coefficient of Determination: 0.09157565485560071 RMSE: 0.20254670881960854 NRMSE: 0.14210214178846645 MAPE: 362.2772318015171 Pearson Correlation: 0.22440362464908511 Spearman Correlation: 0.31279442387062184 Coefficient of Determination: 0.023804995816902097 RMSE: 0.18607319271768477 NRMSE: 0.16184921996545512 MAPE: 145.37234733699452 Predictor: RandomForests Pearson Correlation: 0.3891258123259422 Spearman Correlation: 0.36938342863271795 Coefficient of Determination: 0.14911008437180973 RMSE: 0.196027723669268 NRMSE: 0.13752857079563618 MAPE: 478.856233370938 Pearson Correlation: 0.26538641887841413 Spearman Correlation: 0.30083105858774284 Coefficient of Determination: 0.05348373735736711 RMSE: 0.1832228183542154 NRMSE: 0.1593699221117498 MAPE: 189.1102156264556 Protein: PTEN x_train_column_count: 3 x_train columns: ['mRNA_PTEN', 'DNA_PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 0.41739205840807847 Spearman Correlation: 0.43230689448688175 Coefficient of Determination: 0.1742161304221327 RMSE: 0.5718564298008542 NRMSE: 0.08941543738579534 MAPE: 346.9712456051454 Pearson Correlation: 0.3733634355630607 Spearman Correlation: 0.38894001172084447 Coefficient of Determination: 0.12725347431954004 RMSE: 0.43997360539608393 NRMSE: 0.10519141333048437 MAPE: 130.978782525666 Predictor: ElasticNet Pearson Correlation: 0.4001556472176304 Spearman Correlation: 0.42433352345622366 Coefficient of Determination: 0.16009185919982016 RMSE: 0.5767262330346786 NRMSE: 0.09017687953008813 MAPE: 417.5383098893134 Pearson Correlation: 0.3972947063376551 Spearman Correlation: 0.39194753051783693 Coefficient of Determination: 0.146370112515941 RMSE: 0.43512833529570843 NRMSE: 0.10403297836171484 MAPE: 117.06103792345874 Predictor: RandomForests Pearson Correlation: 0.4633203795379582 Spearman Correlation: 0.4620914068616879 Coefficient of Determination: 0.20670767363397735 RMSE: 0.56049331553177 NRMSE: 0.08763870151384097 MAPE: 457.7437175681701 Pearson Correlation: 0.3834518426201456 Spearman Correlation: 0.4069254029650803 Coefficient of Determination: 0.14346586379011672 RMSE: 0.4358679110110523 NRMSE: 0.10420980036605278 MAPE: 125.56909459965324 Protein: BRCA2 x_train_column_count: 3 x_train columns: ['mRNA_BRCA2', 'DNA_BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.05158877962698899 Spearman Correlation: 0.04564328942333082 Coefficient of Determination: 0.0026614021834020507 RMSE: 0.1897970804221519 NRMSE: 0.12791974255395352 MAPE: 115.63062783871668 Pearson Correlation: -0.0803464255938603 Spearman Correlation: -0.05363408521303259 Coefficient of Determination: -0.013463242593510838 RMSE: 0.21556805164586199 NRMSE: 0.1482698496075095 MAPE: 108.67907953219245 Predictor: ElasticNet Pearson Correlation: 0.029598716808603837 Spearman Correlation: 0.007235394469500479 Coefficient of Determination: 0.0008759935925667373 RMSE: 0.18996688926006597 NRMSE: 0.12803419058856522 MAPE: 114.87279644470485 Pearson Correlation: -0.01605456565446289 Spearman Correlation: 0.05298569807603587 Coefficient of Determination: -0.0058323765362682245 RMSE: 0.21475495896449218 NRMSE: 0.14771059637558012 MAPE: 112.85176623124009 Predictor: RandomForests Pearson Correlation: 0.31998440911558795 Spearman Correlation: 0.24802003027707106 Coefficient of Determination: 0.06180264413915071 RMSE: 0.18408369217434747 NRMSE: 0.1240690239225376 MAPE: 126.72705637821693 Pearson Correlation: -0.010689377720268511 Spearman Correlation: -0.07912332391456106 Coefficient of Determination: -0.015145056210811303 RMSE: 0.21574684204779176 NRMSE: 0.14839282342391225 MAPE: 122.88950905863621 Protein: CDKN2A x_train_column_count: 3 x_train columns: ['mRNA_CDKN2A', 'DNA_CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.5125835327926108 Spearman Correlation: 0.4336429518634918 Coefficient of Determination: 0.2627418780901536 RMSE: 0.5732160550929118 NRMSE: 0.13382892582483 MAPE: 188.75875202630027 Pearson Correlation: 0.5522357778133558 Spearman Correlation: 0.532722353146548 Coefficient of Determination: 0.29619350676231593 RMSE: 0.550793273990638 NRMSE: 0.17004515883752833 MAPE: 119.44190896905127 Predictor: ElasticNet Pearson Correlation: 0.510337443051013 Spearman Correlation: 0.46622659696247376 Coefficient of Determination: 0.2604395695131335 RMSE: 0.5741103765669088 NRMSE: 0.13403772332996564 MAPE: 180.15595869213928 Pearson Correlation: 0.5427380780663628 Spearman Correlation: 0.5693711891669472 Coefficient of Determination: 0.28702076175908553 RMSE: 0.5543709128961778 NRMSE: 0.17114967518637206 MAPE: 119.65126615039156 Predictor: RandomForests Pearson Correlation: 0.6267342324625859 Spearman Correlation: 0.4979066303432582 Coefficient of Determination: 0.3920174432495791 RMSE: 0.5205400181119146 NRMSE: 0.12153063553229236 MAPE: 264.0374073954278 Pearson Correlation: 0.6271026913419488 Spearman Correlation: 0.5728813153345717 Coefficient of Determination: 0.39022470913901564 RMSE: 0.5126806244426771 NRMSE: 0.15827872694349576 MAPE: 124.13607839156002 Protein: TP53 x_train_column_count: 3 x_train columns: ['mRNA_TP53', 'DNA_TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.5191360566570263 Spearman Correlation: 0.43024227009428323 Coefficient of Determination: 0.2695022453214073 RMSE: 0.3847076404534634 NRMSE: 0.0924555732885036 MAPE: 706.0433011042358 Pearson Correlation: 0.4779190135996075 Spearman Correlation: 0.4491402635943092 Coefficient of Determination: 0.20146229916852443 RMSE: 0.38465266630641193 NRMSE: 0.1434366635615645 MAPE: 423.4700386992422 Predictor: ElasticNet Pearson Correlation: 0.49893117529437814 Spearman Correlation: 0.4016450028934564 Coefficient of Determination: 0.2426459765709328 RMSE: 0.39171557280479447 NRMSE: 0.09413976755702824 MAPE: 672.580231116217 Pearson Correlation: 0.45181254442768465 Spearman Correlation: 0.4229853240065338 Coefficient of Determination: 0.18217200160079183 RMSE: 0.3892709742034724 NRMSE: 0.1451588267858971 MAPE: 431.82504052891255 Predictor: RandomForests Pearson Correlation: 0.5661439386931005 Spearman Correlation: 0.4969297339041271 Coefficient of Determination: 0.3124832946569067 RMSE: 0.37321835689295585 NRMSE: 0.08969439002474307 MAPE: 671.5681223250726 Pearson Correlation: 0.47378867648689216 Spearman Correlation: 0.4489145730466492 Coefficient of Determination: 0.21270148958171364 RMSE: 0.3819361355432893 NRMSE: 0.14242367146959167 MAPE: 386.88985379521375 Protein: CTNNB1 x_train_column_count: 3 x_train columns: ['mRNA_CTNNB1', 'DNA_CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.06338009029752081 Spearman Correlation: 0.08633119498695128 Coefficient of Determination: 0.004017035846122119 RMSE: 0.7676509388043595 NRMSE: 0.15099349701108566 MAPE: 432.3318344203724 Pearson Correlation: 0.1970269024975425 Spearman Correlation: 0.24086335241087797 Coefficient of Determination: 0.012306409738177093 RMSE: 0.6091869629375852 NRMSE: 0.19915229753754132 MAPE: 1289.8785304708385 Predictor: ElasticNet Pearson Correlation: 0.051747475666367275 Spearman Correlation: 0.07873234122650967 Coefficient of Determination: 0.002677801229203358 RMSE: 0.7681668709974171 NRMSE: 0.1510949785596808 MAPE: 433.42687505377376 Pearson Correlation: 0.21972783891735959 Spearman Correlation: 0.26859935909425303 Coefficient of Determination: 0.00957424818110808 RMSE: 0.6100289486462351 NRMSE: 0.1994275552146965 MAPE: 1336.3305423296326 Predictor: RandomForests Pearson Correlation: 0.3508430461268562 Spearman Correlation: 0.309013951041836 Coefficient of Determination: 0.06480099241539428 RMSE: 0.7438576760962169 NRMSE: 0.14631346894103403 MAPE: 464.8922382972854 Pearson Correlation: 0.2558846976594461 Spearman Correlation: 0.22785221110455883 Coefficient of Determination: 0.029845022900138907 RMSE: 0.6037540275270192 NRMSE: 0.1973761899790837 MAPE: 1391.5187469220227 Protein: CCNE1 x_train_column_count: 3 x_train columns: ['mRNA_CCNE1', 'DNA_CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.7314003230267213 Spearman Correlation: 0.7217623240217748 Coefficient of Determination: 0.5349464325235922 RMSE: 0.3562654955534039 NRMSE: 0.08597762761623765 MAPE: 77.52738674237038 Pearson Correlation: 0.6703705524680661 Spearman Correlation: 0.6748238756094217 Coefficient of Determination: 0.43807894862647034 RMSE: 0.2735256035356809 NRMSE: 0.11914692840339804 MAPE: 98.41879547639356 Predictor: ElasticNet Pearson Correlation: 0.7311550781020142 Spearman Correlation: 0.724580992574438 Coefficient of Determination: 0.5345877466043218 RMSE: 0.3564028590694382 NRMSE: 0.08601077758270101 MAPE: 77.48483952107688 Pearson Correlation: 0.6686208249928275 Spearman Correlation: 0.6712078704223245 Coefficient of Determination: 0.4364873185214214 RMSE: 0.2739127075057997 NRMSE: 0.11931554972592225 MAPE: 97.2839269864578 Predictor: RandomForests Pearson Correlation: 0.8620691956243819 Spearman Correlation: 0.7258461435512167 Coefficient of Determination: 0.7409446961842998 RMSE: 0.26590010990733026 NRMSE: 0.06416972992912862 MAPE: 55.84380489692009 Pearson Correlation: 0.7701643879178106 Spearman Correlation: 0.6683266662561321 Coefficient of Determination: 0.5244794807311457 RMSE: 0.251619888021991 NRMSE: 0.10960486475671515 MAPE: 78.04060369885696 Protein: CCND1 x_train_column_count: 3 x_train columns: ['mRNA_CCND1', 'DNA_CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.41572433129704583 Spearman Correlation: 0.39279449001428085 Coefficient of Determination: 0.17282671963237595 RMSE: 0.22251267964118898 NRMSE: 0.1337681882153569 MAPE: 550.0812067345653 Pearson Correlation: 0.3771844108494548 Spearman Correlation: 0.3178967318794499 Coefficient of Determination: 0.12537428261043815 RMSE: 0.1961514566227935 NRMSE: 0.18586741267925055 MAPE: 335.2157095095554 Predictor: ElasticNet Pearson Correlation: 0.41282794320073424 Spearman Correlation: 0.4054878999711348 Coefficient of Determination: 0.17042270810168159 RMSE: 0.22283578905651164 NRMSE: 0.13396243225193374 MAPE: 536.6732152521363 Pearson Correlation: 0.3764601601585726 Spearman Correlation: 0.345642713749548 Coefficient of Determination: 0.11703663952837218 RMSE: 0.19708417657527336 NRMSE: 0.18675123096592852 MAPE: 342.9930885035453 Predictor: RandomForests Pearson Correlation: 0.48860514451656034 Spearman Correlation: 0.43504145506937325 Coefficient of Determination: 0.23412216603759417 RMSE: 0.21410966174526241 NRMSE: 0.1287165368609626 MAPE: 533.2034154025292 Pearson Correlation: 0.36968779167919275 Spearman Correlation: 0.34354700584606596 Coefficient of Determination: 0.12687567696399638 RMSE: 0.1959830261855674 NRMSE: 0.18570781289792518 MAPE: 242.45342663339522 Protein: ERBB2 x_train_column_count: 3 x_train columns: ['mRNA_ERBB2', 'DNA_ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 0.8072174404386138 Spearman Correlation: 0.5979146922937387 Coefficient of Determination: 0.6515999961482668 RMSE: 0.5791780769065523 NRMSE: 0.0986725176595997 MAPE: 315.8108291161233 Pearson Correlation: 0.8785285562393 Spearman Correlation: 0.6958923376759953 Coefficient of Determination: 0.7693825066503897 RMSE: 0.5121813220852103 NRMSE: 0.09239146440674116 MAPE: 115.00149159731232 Predictor: ElasticNet Pearson Correlation: 0.8047450577738716 Spearman Correlation: 0.6071433525364784 Coefficient of Determination: 0.6473003723381527 RMSE: 0.5827409526192487 NRMSE: 0.09927951217596279 MAPE: 313.29704431648173 Pearson Correlation: 0.8709925759360215 Spearman Correlation: 0.7119598897247268 Coefficient of Determination: 0.7570358054081336 RMSE: 0.5257130423730787 NRMSE: 0.09483242701007986 MAPE: 117.53488912659284 Predictor: RandomForests Pearson Correlation: 0.8242163453946054 Spearman Correlation: 0.6402041160595304 Coefficient of Determination: 0.6769950273006478 RMSE: 0.5576704636110034 NRMSE: 0.09500834175698986 MAPE: 500.4934645193762 Pearson Correlation: 0.8707861704837472 Spearman Correlation: 0.7083132070906469 Coefficient of Determination: 0.7562631320029732 RMSE: 0.5265483136924883 NRMSE: 0.09498310009605461 MAPE: 184.73867419549478 Protein: ERBB3 x_train_column_count: 3 x_train columns: ['mRNA_ERBB3', 'DNA_ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.41551795068766123 Spearman Correlation: 0.44882116730356786 Coefficient of Determination: 0.1726551673436737 RMSE: 0.41022681554070656 NRMSE: 0.1487476986009879 MAPE: 207.46441821654068 Pearson Correlation: 0.3930085173012459 Spearman Correlation: 0.4283669372436066 Coefficient of Determination: 0.12955574654445745 RMSE: 0.4615635320487284 NRMSE: 0.12832794385173515 MAPE: 147.52332011894035 Predictor: ElasticNet Pearson Correlation: 0.4118347805352838 Spearman Correlation: 0.4548855783210745 Coefficient of Determination: 0.16960788642884905 RMSE: 0.41098159597773126 NRMSE: 0.14902138098522819 MAPE: 205.93491786104846 Pearson Correlation: 0.39517943353034346 Spearman Correlation: 0.4259180289031036 Coefficient of Determination: 0.13282001253745668 RMSE: 0.46069726098489505 NRMSE: 0.12808709556819212 MAPE: 147.06531071346663 Predictor: RandomForests Pearson Correlation: 0.5060684091191713 Spearman Correlation: 0.4922400329959107 Coefficient of Determination: 0.254755900166885 RMSE: 0.3893409099380018 NRMSE: 0.14117449696251158 MAPE: 238.344304367678 Pearson Correlation: 0.40530142451487444 Spearman Correlation: 0.3999364807568691 Coefficient of Determination: 0.137274337870261 RMSE: 0.45951253723688645 NRMSE: 0.12775770827466085 MAPE: 164.7657924578323 Fold: 4 Protein: RB1 x_train_column_count: 3 x_train columns: ['mRNA_RB1', 'DNA_RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.2046934487238742 Spearman Correlation: 0.2638035826457963 Coefficient of Determination: 0.04189940795047331 RMSE: 0.24618538056260422 NRMSE: 0.09003268744975286 MAPE: 265.6568023589488 Pearson Correlation: 0.3114279587480756 Spearman Correlation: 0.3860122944176362 Coefficient of Determination: 0.017855139745727944 RMSE: 0.16340372044825455 NRMSE: 0.15655896260324087 MAPE: 110.7274049056959 Predictor: ElasticNet Pearson Correlation: 0.20060321424304423 Spearman Correlation: 0.2604333098848863 Coefficient of Determination: 0.04024164460534618 RMSE: 0.2463982708993572 NRMSE: 0.09011054377536469 MAPE: 268.3497274814239 Pearson Correlation: 0.30291776516862734 Spearman Correlation: 0.3658524420503997 Coefficient of Determination: 0.0009300459157621788 RMSE: 0.16480565723624552 NRMSE: 0.15790217418105001 MAPE: 110.47272546768954 Predictor: RandomForests Pearson Correlation: 0.3462170390140414 Spearman Correlation: 0.37509748290870165 Coefficient of Determination: 0.10412397390728556 RMSE: 0.23805683892960428 NRMSE: 0.08705999083148196 MAPE: 306.9852759388363 Pearson Correlation: 0.2419010168517363 Spearman Correlation: 0.33507815097347543 Coefficient of Determination: -0.0304798077326236 RMSE: 0.1673762793132277 NRMSE: 0.1603651164232052 MAPE: 110.36165825622047 Protein: CDH1 x_train_column_count: 3 x_train columns: ['mRNA_CDH1', 'DNA_CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 0.6286147487551993 Spearman Correlation: 0.6067670391716472 Coefficient of Determination: 0.3951565023525623 RMSE: 0.8702739454574308 NRMSE: 0.13857424054288567 MAPE: 525.00288828197 Pearson Correlation: 0.6640199683798835 Spearman Correlation: 0.43704534969263964 Coefficient of Determination: 0.4148442907794492 RMSE: 0.8922792210772202 NRMSE: 0.16187352074983133 MAPE: 268.48218125605763 Predictor: ElasticNet Pearson Correlation: 0.602058253037068 Spearman Correlation: 0.6048526071103854 Coefficient of Determination: 0.35867610909024106 RMSE: 0.896134470226411 NRMSE: 0.14269202736002212 MAPE: 634.1236044648291 Pearson Correlation: 0.5833730633620747 Spearman Correlation: 0.4375939849624061 Coefficient of Determination: 0.31723602849283805 RMSE: 0.9638298094971988 NRMSE: 0.1748539257460177 MAPE: 320.6034833122145 Predictor: RandomForests Pearson Correlation: 0.7210350753965069 Spearman Correlation: 0.6197542197054043 Coefficient of Determination: 0.5187108406172025 RMSE: 0.7763141701129105 NRMSE: 0.12361296935016566 MAPE: 346.1931662651616 Pearson Correlation: 0.7573263588368068 Spearman Correlation: 0.4502703262535351 Coefficient of Determination: 0.5218686736792134 RMSE: 0.8065636687849284 NRMSE: 0.14632336794472775 MAPE: 166.38047571425295 Protein: CDH2 x_train_column_count: 3 x_train columns: ['mRNA_CDH2', 'DNA_CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.1328298679386362 Spearman Correlation: 0.040213172180825214 Coefficient of Determination: 0.017643773816595654 RMSE: 0.376001939188154 NRMSE: 0.13624245930435322 MAPE: 584.6956953205171 Pearson Correlation: 0.199277503184848 Spearman Correlation: 0.032386937492986205 Coefficient of Determination: -0.01617446114668586 RMSE: 0.33595142823568475 NRMSE: 0.17330662593149515 MAPE: 127.2497735705661 Predictor: ElasticNet Pearson Correlation: 0.12726575412288096 Spearman Correlation: 0.07146547137499795 Coefficient of Determination: 0.016196571640589186 RMSE: 0.37627879932682323 NRMSE: 0.1363427782182851 MAPE: 647.0576024219794 Pearson Correlation: 0.20599048693772695 Spearman Correlation: -0.07145475629371938 Coefficient of Determination: -0.018663364567124807 RMSE: 0.3363625974411198 NRMSE: 0.1735187350094506 MAPE: 149.979760948571 Predictor: RandomForests Pearson Correlation: 0.2746635883531955 Spearman Correlation: 0.23027068428685687 Coefficient of Determination: 0.05535536594528101 RMSE: 0.36871415851626854 NRMSE: 0.13360176770645285 MAPE: 395.90996355029006 Pearson Correlation: 0.1659420975878766 Spearman Correlation: 0.01170280292879656 Coefficient of Determination: -0.027235437892395353 RMSE: 0.3377748816795384 NRMSE: 0.17424728740019932 MAPE: 158.52821883559227 Protein: CDH3 x_train_column_count: 3 x_train columns: ['mRNA_CDH3', 'DNA_CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.2601046552149239 Spearman Correlation: 0.32971494896928316 Coefficient of Determination: 0.06765443166447438 RMSE: 0.19882273960705912 NRMSE: 0.14169843323336168 MAPE: 171.39305572210006 Pearson Correlation: 0.3964660458922398 Spearman Correlation: 0.3050387161934688 Coefficient of Determination: 0.035114198763392945 RMSE: 0.2041152940367816 NRMSE: 0.1816715862690973 MAPE: 579.5580671701686 Predictor: ElasticNet Pearson Correlation: 0.25854027328459467 Spearman Correlation: 0.3309265441567785 Coefficient of Determination: 0.06684307254477051 RMSE: 0.19890923198065136 NRMSE: 0.14176007524598497 MAPE: 172.40226966614551 Pearson Correlation: 0.4135532481751863 Spearman Correlation: 0.3220264591827829 Coefficient of Determination: 0.04253292702053457 RMSE: 0.20332908812048964 NRMSE: 0.18097182843556045 MAPE: 586.7738689126844 Predictor: RandomForests Pearson Correlation: 0.36864805089403657 Spearman Correlation: 0.3616203756772695 Coefficient of Determination: 0.13347585705457865 RMSE: 0.1916760857543874 NRMSE: 0.13660510409110097 MAPE: 236.82212495859406 Pearson Correlation: 0.34666151264379064 Spearman Correlation: 0.28083039109178015 Coefficient of Determination: 0.03155081912662705 RMSE: 0.20449185154803998 NRMSE: 0.18200673901066267 MAPE: 834.0365079413169 Protein: PTEN x_train_column_count: 3 x_train columns: ['mRNA_PTEN', 'DNA_PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 0.4023646675334011 Spearman Correlation: 0.4208824134682371 Coefficient of Determination: 0.1618973256792643 RMSE: 0.5142992432276399 NRMSE: 0.09948530703103525 MAPE: 236.8337844971261 Pearson Correlation: 0.470873858729993 Spearman Correlation: 0.5017693487449969 Coefficient of Determination: 0.1812106902479409 RMSE: 0.6746449995895468 NRMSE: 0.10548745205058976 MAPE: 509.6268273390813 Predictor: ElasticNet Pearson Correlation: 0.39770673577924787 Spearman Correlation: 0.4125541754874478 Coefficient of Determination: 0.15817064722837793 RMSE: 0.5154414075987979 NRMSE: 0.09970624566674363 MAPE: 259.1569919992023 Pearson Correlation: 0.4352330047258671 Spearman Correlation: 0.4688213069988404 Coefficient of Determination: 0.158047575125432 RMSE: 0.6841211228923064 NRMSE: 0.10696913812716854 MAPE: 602.3329805555614 Predictor: RandomForests Pearson Correlation: 0.4656404737865962 Spearman Correlation: 0.4504429893238428 Coefficient of Determination: 0.20610195518527785 RMSE: 0.500552503968117 NRMSE: 0.09682615753019905 MAPE: 219.70630611894583 Pearson Correlation: 0.4042714355078431 Spearman Correlation: 0.48504549399798236 Coefficient of Determination: 0.14330565070819468 RMSE: 0.6900843445923847 NRMSE: 0.10790154711787736 MAPE: 321.5505281120903 Protein: BRCA2 x_train_column_count: 3 x_train columns: ['mRNA_BRCA2', 'DNA_BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.031381120781656204 Spearman Correlation: 0.0209114132193999 Coefficient of Determination: 0.0009847747415129282 RMSE: 0.19170280556570432 NRMSE: 0.12349995526861288 MAPE: 112.53864502355458 Pearson Correlation: -0.1536030110354886 Spearman Correlation: -0.18366563174104417 Coefficient of Determination: -0.009459554875555387 RMSE: 0.2090893711256086 NRMSE: 0.2031354704856735 MAPE: 147.370917754084 Predictor: ElasticNet Pearson Correlation: 0.02188802695411087 Spearman Correlation: 0.01572029885733223 Coefficient of Determination: 0.000479004062040711 RMSE: 0.19175132604227565 NRMSE: 0.12353121342713845 MAPE: 111.88965071418625 Pearson Correlation: -0.17899779266858884 Spearman Correlation: -0.15346076634372002 Coefficient of Determination: -0.006782440963589265 RMSE: 0.20881193173908402 NRMSE: 0.20286593129288943 MAPE: 141.75386815240824 Predictor: RandomForests Pearson Correlation: 0.3453470098579431 Spearman Correlation: 0.26155997334169223 Coefficient of Determination: 0.05356232623998569 RMSE: 0.1865900259106003 NRMSE: 0.12020616905176378 MAPE: 118.00429655991509 Pearson Correlation: 0.12791025809156378 Spearman Correlation: -0.06975152162832544 Coefficient of Determination: 0.01615838057894281 RMSE: 0.20641919978567477 NRMSE: 0.20054133330646237 MAPE: 117.51014809136255 Protein: CDKN2A x_train_column_count: 3 x_train columns: ['mRNA_CDKN2A', 'DNA_CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.5188832504970194 Spearman Correlation: 0.47144283298498774 Coefficient of Determination: 0.2692398276463528 RMSE: 0.5761271558719838 NRMSE: 0.13024237727410054 MAPE: 176.6235004420524 Pearson Correlation: 0.5298305090772336 Spearman Correlation: 0.2798513697178269 Coefficient of Determination: 0.2678555798424678 RMSE: 0.5396401503553127 NRMSE: 0.1625911872116037 MAPE: 128.59754005088274 Predictor: ElasticNet Pearson Correlation: 0.5150730298771482 Spearman Correlation: 0.49322950642841884 Coefficient of Determination: 0.26527774296199247 RMSE: 0.5776868870602535 NRMSE: 0.13059497842438192 MAPE: 160.50390919005665 Pearson Correlation: 0.5441695179815295 Spearman Correlation: 0.40950884674372506 Coefficient of Determination: 0.27835950995930137 RMSE: 0.5357551106851096 NRMSE: 0.16142064196598663 MAPE: 118.29273584033126 Predictor: RandomForests Pearson Correlation: 0.6324201705536484 Spearman Correlation: 0.5249378582030331 Coefficient of Determination: 0.3993594896562267 RMSE: 0.5223218832526526 NRMSE: 0.11807887040864758 MAPE: 286.3003637639724 Pearson Correlation: 0.6232110935662796 Spearman Correlation: 0.4715259206137264 Coefficient of Determination: 0.3611191957059581 RMSE: 0.5040989536496223 NRMSE: 0.15188278205773495 MAPE: 126.65421282515818 Protein: TP53 x_train_column_count: 3 x_train columns: ['mRNA_TP53', 'DNA_TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 0.5024169899282646 Spearman Correlation: 0.4476400836830998 Coefficient of Determination: 0.2524228317685776 RMSE: 0.38918448287592083 NRMSE: 0.09353147870125472 MAPE: 716.9271318540168 Pearson Correlation: 0.5375616537301072 Spearman Correlation: 0.34889961221461613 Coefficient of Determination: 0.28608584424478145 RMSE: 0.36485311467374026 NRMSE: 0.11578227807620596 MAPE: 336.0228452994754 Predictor: ElasticNet Pearson Correlation: 0.48188531183680017 Spearman Correlation: 0.41379159411111194 Coefficient of Determination: 0.22568158723709364 RMSE: 0.3960839961365983 NRMSE: 0.0951896169518381 MAPE: 712.1340840601069 Pearson Correlation: 0.5319571799917323 Spearman Correlation: 0.3585107046222522 Coefficient of Determination: 0.2601806950164487 RMSE: 0.37141367614402115 NRMSE: 0.11786420288906484 MAPE: 255.79367535568616 Predictor: RandomForests Pearson Correlation: 0.5500984751498655 Spearman Correlation: 0.4997504349151704 Coefficient of Determination: 0.2941271235364914 RMSE: 0.3781732002999231 NRMSE: 0.0908851719057734 MAPE: 695.2142859591731 Pearson Correlation: 0.5731182645219236 Spearman Correlation: 0.4295432697842317 Coefficient of Determination: 0.30903732874725187 RMSE: 0.3589404096871789 NRMSE: 0.11390594366818318 MAPE: 254.3949997626327 Protein: CTNNB1 x_train_column_count: 3 x_train columns: ['mRNA_CTNNB1', 'DNA_CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.11124579514054277 Spearman Correlation: 0.13475019397756866 Coefficient of Determination: 0.012375626936451556 RMSE: 0.7070109499801447 NRMSE: 0.170759093319521 MAPE: 563.6781647775337 Pearson Correlation: -0.07316120019751478 Spearman Correlation: 0.07713562513248295 Coefficient of Determination: -0.1642191967008928 RMSE: 0.8658400442507479 NRMSE: 0.18203684388418717 MAPE: 979.0041905196625 Predictor: ElasticNet Pearson Correlation: 0.10830589448220491 Spearman Correlation: 0.13480386712524542 Coefficient of Determination: 0.011730166768875172 RMSE: 0.7072419451245493 NRMSE: 0.17081488385773097 MAPE: 573.4573290631525 Pearson Correlation: -0.09138017300424374 Spearman Correlation: 0.03373358770059477 Coefficient of Determination: -0.16796966211836417 RMSE: 0.8672335499178745 NRMSE: 0.18232981875323237 MAPE: 970.1367588323346 Predictor: RandomForests Pearson Correlation: 0.33046953393513023 Spearman Correlation: 0.3063937409450337 Coefficient of Determination: 0.06835642393636576 RMSE: 0.6866811683253319 NRMSE: 0.16584899244646217 MAPE: 574.9023597951262 Pearson Correlation: 0.052582234375097514 Spearman Correlation: 0.11042818181408402 Coefficient of Determination: -0.13994052849493954 RMSE: 0.8567643493290955 NRMSE: 0.180128742185076 MAPE: 959.2237604240988 Protein: CCNE1 x_train_column_count: 3 x_train columns: ['mRNA_CCNE1', 'DNA_CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.7286400817572335 Spearman Correlation: 0.7091225350184517 Coefficient of Determination: 0.5309163687431881 RMSE: 0.34573888294640764 NRMSE: 0.08343723796278872 MAPE: 76.35374741204191 Pearson Correlation: 0.8207755405473406 Spearman Correlation: 0.7186348956969539 Coefficient of Determination: 0.47913550279402983 RMSE: 0.32627920397776533 NRMSE: 0.1331425789511815 MAPE: 111.3710279846883 Predictor: ElasticNet Pearson Correlation: 0.7284659471489122 Spearman Correlation: 0.7105645817584747 Coefficient of Determination: 0.5306626345345026 RMSE: 0.3458323779185179 NRMSE: 0.08345980112424112 MAPE: 76.12616468363554 Pearson Correlation: 0.8235508887291156 Spearman Correlation: 0.7249192633324606 Coefficient of Determination: 0.47726996160433044 RMSE: 0.32686298656335566 NRMSE: 0.13338079921788776 MAPE: 111.11379686950973 Predictor: RandomForests Pearson Correlation: 0.8558321664550124 Spearman Correlation: 0.7158803290459447 Coefficient of Determination: 0.7289157895599063 RMSE: 0.2628301582132483 NRMSE: 0.06342885783556924 MAPE: 55.54281814763038 Pearson Correlation: 0.8454418160475344 Spearman Correlation: 0.7088136995510649 Coefficient of Determination: 0.7021847735901194 RMSE: 0.24671778934110478 NRMSE: 0.10067648304133878 MAPE: 69.85591672927826 Protein: CCND1 x_train_column_count: 3 x_train columns: ['mRNA_CCND1', 'DNA_CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 0.3746815735269406 Spearman Correlation: 0.35395103891826996 Coefficient of Determination: 0.14038628154062427 RMSE: 0.22280163394164668 NRMSE: 0.14234525110952242 MAPE: 552.1562719009495 Pearson Correlation: 0.5968130666515656 Spearman Correlation: 0.49525056422149905 Coefficient of Determination: 0.27566345573841233 RMSE: 0.19489881178488835 NRMSE: 0.12291801954142809 MAPE: 457.1019648423456 Predictor: ElasticNet Pearson Correlation: 0.3688709853040716 Spearman Correlation: 0.3682176150482697 Coefficient of Determination: 0.13606002018127716 RMSE: 0.2233615879916108 NRMSE: 0.14270299893408644 MAPE: 541.964248446204 Pearson Correlation: 0.6030456441886552 Spearman Correlation: 0.4990959987032258 Coefficient of Determination: 0.26756309702542236 RMSE: 0.19598557246438608 NRMSE: 0.12360341351184793 MAPE: 465.134481886321 Predictor: RandomForests Pearson Correlation: 0.46197344313750055 Spearman Correlation: 0.42009485046560946 Coefficient of Determination: 0.20718233025160238 RMSE: 0.2139702346841979 NRMSE: 0.1367029776543859 MAPE: 501.3862819496525 Pearson Correlation: 0.5238770054209727 Spearman Correlation: 0.4903835937185394 Coefficient of Determination: 0.25482245899881895 RMSE: 0.19768279443315043 NRMSE: 0.12467381081808177 MAPE: 429.8019969812378 Protein: ERBB2 x_train_column_count: 3 x_train columns: ['mRNA_ERBB2', 'DNA_ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 0.833835133229307 Spearman Correlation: 0.5917403153684603 Coefficient of Determination: 0.6952810294075359 RMSE: 0.5414286843969051 NRMSE: 0.09224128735657786 MAPE: 229.5505669767502 Pearson Correlation: 0.7958879450467451 Spearman Correlation: 0.6696725266810611 Coefficient of Determination: 0.5896100986887256 RMSE: 0.6641056960251818 NRMSE: 0.11958542442921126 MAPE: 216.70937793367017 Predictor: ElasticNet Pearson Correlation: 0.8313178726275442 Spearman Correlation: 0.601465057278842 Coefficient of Determination: 0.6906220029336596 RMSE: 0.5455520927185012 NRMSE: 0.09294377782825379 MAPE: 228.88402000656592 Pearson Correlation: 0.8000953366802495 Spearman Correlation: 0.6748546426452492 Coefficient of Determination: 0.5971146664086233 RMSE: 0.6580056177990026 NRMSE: 0.11848698415367209 MAPE: 196.35652765774512 Predictor: RandomForests Pearson Correlation: 0.843913337833023 Spearman Correlation: 0.6435110242292863 Coefficient of Determination: 0.711152149460804 RMSE: 0.527140136086152 NRMSE: 0.08980699798731655 MAPE: 395.6809024358961 Pearson Correlation: 0.7806416834657331 Spearman Correlation: 0.6801675696846675 Coefficient of Determination: 0.5587921881259992 RMSE: 0.6885896159593243 NRMSE: 0.12399424063804594 MAPE: 220.33738001385248 Protein: ERBB3 x_train_column_count: 3 x_train columns: ['mRNA_ERBB3', 'DNA_ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.4273839429487755 Spearman Correlation: 0.47243121817648176 Coefficient of Determination: 0.18265703469044214 RMSE: 0.43188866805855225 NRMSE: 0.11809303537922619 MAPE: 214.34116729631762 Pearson Correlation: 0.3201915437030955 Spearman Correlation: 0.31849524308283145 Coefficient of Determination: 0.0527945787755727 RMSE: 0.3742912776548627 NRMSE: 0.18422838239225006 MAPE: 195.61978231048172 Predictor: ElasticNet Pearson Correlation: 0.4247436800277296 Spearman Correlation: 0.47559620013365334 Coefficient of Determination: 0.18040719369690272 RMSE: 0.4324826739539047 NRMSE: 0.11825545677252336 MAPE: 212.58759016688913 Pearson Correlation: 0.3203755812394411 Spearman Correlation: 0.3203655905933989 Coefficient of Determination: 0.05473825693353351 RMSE: 0.3739070550992104 NRMSE: 0.18403926577604157 MAPE: 193.7204812200924 Predictor: RandomForests Pearson Correlation: 0.5042835414168672 Spearman Correlation: 0.49668404335424643 Coefficient of Determination: 0.2524446888646191 RMSE: 0.41303923745978793 NRMSE: 0.11293896063912127 MAPE: 238.2738801946076 Pearson Correlation: 0.4100968718338418 Spearman Correlation: 0.31876016630496046 Coefficient of Determination: 0.14491976147444363 RMSE: 0.35562399297314473 NRMSE: 0.17504023437524044 MAPE: 237.49412170542584 Fold: 5 Protein: RB1 x_train_column_count: 3 x_train columns: ['mRNA_RB1', 'DNA_RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.21905866233588442 Spearman Correlation: 0.2755894037576364 Coefficient of Determination: 0.047986697544387114 RMSE: 0.22822390508529145 NRMSE: 0.11274603433665711 MAPE: 185.85319064617588 Pearson Correlation: 0.18067146500968545 Spearman Correlation: 0.28927293357772543 Coefficient of Determination: -0.07080953626950293 RMSE: 0.2487341986926001 NRMSE: 0.12541304413438079 MAPE: 436.7325323189583 Predictor: ElasticNet Pearson Correlation: 0.19578397808916828 Spearman Correlation: 0.27154453701595577 Coefficient of Determination: 0.03833136053280506 RMSE: 0.22937831105947948 NRMSE: 0.11331632821343397 MAPE: 190.61928493039167 Pearson Correlation: 0.22446261577437424 Spearman Correlation: 0.28244990585917534 Coefficient of Determination: -0.044185956830937734 RMSE: 0.24562259189312707 NRMSE: 0.1238441562093495 MAPE: 394.21266644354876 Predictor: RandomForests Pearson Correlation: 0.338529583782999 Spearman Correlation: 0.37622171753660594 Coefficient of Determination: 0.10262128846975915 RMSE: 0.22157844237125168 NRMSE: 0.1094630760196478 MAPE: 198.84431772336924 Pearson Correlation: 0.15641005862700927 Spearman Correlation: 0.252204036253669 Coefficient of Determination: -0.08589886703298832 RMSE: 0.25048058898527914 NRMSE: 0.12629358297464813 MAPE: 581.5404947673852 Protein: CDH1 x_train_column_count: 3 x_train columns: ['mRNA_CDH1', 'DNA_CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.6735195578640033 Spearman Correlation: 0.5938956565556813 Coefficient of Determination: 0.4536285948253226 RMSE: 0.8323585519880814 NRMSE: 0.13253694977677166 MAPE: 248.2232781655867 Pearson Correlation: 0.4913255568640509 Spearman Correlation: 0.5288021047643986 Coefficient of Determination: 0.22622289721992161 RMSE: 1.0219268011867957 NRMSE: 0.20096493700945817 MAPE: 1041.2465023464447 Predictor: ElasticNet Pearson Correlation: 0.6396365511309364 Spearman Correlation: 0.5927811200302202 Coefficient of Determination: 0.40243714339503045 RMSE: 0.8704789277295413 NRMSE: 0.13860687999260232 MAPE: 286.15366553352834 Pearson Correlation: 0.5030638684605231 Spearman Correlation: 0.5415454058030649 Coefficient of Determination: 0.2483842489052709 RMSE: 1.0071862505990476 NRMSE: 0.1980661640083868 MAPE: 1427.028314998621 Predictor: RandomForests Pearson Correlation: 0.7548483580674016 Spearman Correlation: 0.613866595045728 Coefficient of Determination: 0.5687638225439651 RMSE: 0.7394759582462089 NRMSE: 0.11774719885452833 MAPE: 166.31570951091769 Pearson Correlation: 0.625082550254143 Spearman Correlation: 0.5457639444172435 Coefficient of Determination: 0.3788042778798629 RMSE: 0.9156427904638805 NRMSE: 0.18006387100821628 MAPE: 646.6200881021399 Protein: CDH2 x_train_column_count: 3 x_train columns: ['mRNA_CDH2', 'DNA_CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.1391207231739138 Spearman Correlation: 0.08279227359449186 Coefficient of Determination: 0.019354575616432723 RMSE: 0.3556439590286937 NRMSE: 0.17466920044629128 MAPE: 197.8738969519393 Pearson Correlation: 0.1592997690322712 Spearman Correlation: -0.11654773319842625 Coefficient of Determination: 0.007222907307674942 RMSE: 0.4155825371916907 NRMSE: 0.15540733960013114 MAPE: 239.39614145628744 Predictor: ElasticNet Pearson Correlation: 0.13776475523400486 Spearman Correlation: 0.07886292148061753 Coefficient of Determination: 0.01897912689749548 RMSE: 0.3557120332212275 NRMSE: 0.17470263406572736 MAPE: 224.04087181335765 Pearson Correlation: 0.15378835582174144 Spearman Correlation: -0.1015076266632875 Coefficient of Determination: 0.0039722515057042385 RMSE: 0.4162623533228833 NRMSE: 0.1556615572510455 MAPE: 221.09098232805096 Predictor: RandomForests Pearson Correlation: 0.24027895966315904 Spearman Correlation: 0.27727028262882947 Coefficient of Determination: 0.05132125820094857 RMSE: 0.3497993655853751 NRMSE: 0.17179871596943916 MAPE: 655.7086891621036 Pearson Correlation: 0.07942734585840486 Spearman Correlation: 0.02240025938513883 Coefficient of Determination: -0.010870154878050986 RMSE: 0.41935237173052403 NRMSE: 0.15681707149207189 MAPE: 214.59612447119008 Protein: CDH3 x_train_column_count: 3 x_train columns: ['mRNA_CDH3', 'DNA_CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.2926358053985686 Spearman Correlation: 0.335571981284833 Coefficient of Determination: 0.08563571460126884 RMSE: 0.19484764483185588 NRMSE: 0.13670065445351062 MAPE: 335.2606359694757 Pearson Correlation: 0.26293066078536864 Spearman Correlation: 0.2790932555268769 Coefficient of Determination: 0.06488826484608523 RMSE: 0.21602282814515378 NRMSE: 0.1948978501656942 MAPE: 120.89078538044362 Predictor: ElasticNet Pearson Correlation: 0.29131399778415085 Spearman Correlation: 0.34098087037844793 Coefficient of Determination: 0.08486384490706 RMSE: 0.19492986877041393 NRMSE: 0.1367583408896096 MAPE: 331.7803947121274 Pearson Correlation: 0.2652922331797278 Spearman Correlation: 0.2942804773126847 Coefficient of Determination: 0.06608112336033933 RMSE: 0.21588500135382024 NRMSE: 0.19477350152366968 MAPE: 122.65180027927234 Predictor: RandomForests Pearson Correlation: 0.37768760415009034 Spearman Correlation: 0.38159268503126065 Coefficient of Determination: 0.140238740123804 RMSE: 0.18894024304627136 NRMSE: 0.132556156371914 MAPE: 416.20339791964795 Pearson Correlation: 0.3242708249109008 Spearman Correlation: 0.2757464799041295 Coefficient of Determination: 0.10164070471403974 RMSE: 0.21173513336940541 NRMSE: 0.19102945115835168 MAPE: 149.5102335369333 Protein: PTEN x_train_column_count: 3 x_train columns: ['mRNA_PTEN', 'DNA_PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 0.41588962419341324 Spearman Correlation: 0.43246741302263064 Coefficient of Determination: 0.1729641795117386 RMSE: 0.5174822683472706 NRMSE: 0.08091349673165048 MAPE: 288.94925329695667 Pearson Correlation: 0.4225473497784461 Spearman Correlation: 0.44997319168568184 Coefficient of Determination: 0.17124904565837984 RMSE: 0.6570092082021319 NRMSE: 0.12709091771164732 MAPE: 265.6228832983163 Predictor: ElasticNet Pearson Correlation: 0.3968923446360356 Spearman Correlation: 0.42542817818513023 Coefficient of Determination: 0.1574994244301341 RMSE: 0.5222980642639491 NRMSE: 0.08166649429504325 MAPE: 366.56330815609806 Pearson Correlation: 0.41817292536060574 Spearman Correlation: 0.42867616803202035 Coefficient of Determination: 0.17058285615837554 RMSE: 0.6572732228071256 NRMSE: 0.1271419883176891 MAPE: 262.63041772096926 Predictor: RandomForests Pearson Correlation: 0.4672345651100567 Spearman Correlation: 0.4591334522927066 Coefficient of Determination: 0.2103267758920705 RMSE: 0.5056581592201916 NRMSE: 0.07906467973109087 MAPE: 344.4200544482602 Pearson Correlation: 0.4180885945666071 Spearman Correlation: 0.4547197211225426 Coefficient of Determination: 0.16339310478244984 RMSE: 0.6601158420369176 NRMSE: 0.127691860499249 MAPE: 357.9294599645899 Protein: BRCA2 x_train_column_count: 3 x_train columns: ['mRNA_BRCA2', 'DNA_BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.042607259179672535 Spearman Correlation: 0.04294992568599749 Coefficient of Determination: 0.0018153785348037355 RMSE: 0.20028615534952582 NRMSE: 0.12902957342536694 MAPE: 117.56895811139239 Pearson Correlation: -0.05060451444076583 Spearman Correlation: -0.031663736455566784 Coefficient of Determination: -0.10789089161261689 RMSE: 0.17481777443957053 NRMSE: 0.2286245660623429 MAPE: 113.54419564266126 Predictor: ElasticNet Pearson Correlation: 0.04257688357170663 Spearman Correlation: 0.04263289576165543 Coefficient of Determination: 0.0018127199234500013 RMSE: 0.20028642207507968 NRMSE: 0.1290297452569365 MAPE: 117.35171000745437 Pearson Correlation: -0.055947461482781444 Spearman Correlation: -0.039903240688786645 Coefficient of Determination: -0.10791142819447708 RMSE: 0.17481939469970864 NRMSE: 0.22862668501890882 MAPE: 113.18000815772851 Predictor: RandomForests Pearson Correlation: 0.31981520230128313 Spearman Correlation: 0.2409755684953207 Coefficient of Determination: 0.054257617152051796 RMSE: 0.19495389604706206 NRMSE: 0.1255943926861408 MAPE: 135.63637223880983 Pearson Correlation: 0.021603241579339506 Spearman Correlation: -0.028303263166500073 Coefficient of Determination: -0.11115739917127021 RMSE: 0.17507530128124757 NRMSE: 0.2289613565438404 MAPE: 120.19229771148918 Protein: CDKN2A x_train_column_count: 3 x_train columns: ['mRNA_CDKN2A', 'DNA_CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 0.5663381500090141 Spearman Correlation: 0.4953005174006369 Coefficient of Determination: 0.32073890015563256 RMSE: 0.5601800434543106 NRMSE: 0.14264471071638377 MAPE: 145.65070746342462 Pearson Correlation: 0.31482309890468774 Spearman Correlation: 0.3271038292248033 Coefficient of Determination: -0.015529015772249188 RMSE: 0.6106362533402373 NRMSE: 0.1536539728089976 MAPE: 285.0993645306471 Predictor: ElasticNet Pearson Correlation: 0.5643010023218192 Spearman Correlation: 0.5343610038750622 Coefficient of Determination: 0.31843276833188805 RMSE: 0.5611301599903739 NRMSE: 0.14288664917887853 MAPE: 136.85278900717307 Pearson Correlation: 0.3140860383438703 Spearman Correlation: 0.320181049639023 Coefficient of Determination: -0.02633706933628588 RMSE: 0.6138770874422833 NRMSE: 0.15446946162459005 MAPE: 234.196987092556 Predictor: RandomForests Pearson Correlation: 0.6814633627661284 Spearman Correlation: 0.5582440271028338 Coefficient of Determination: 0.4638574879258852 RMSE: 0.49767907755264007 NRMSE: 0.1267294129389728 MAPE: 263.893146083864 Pearson Correlation: 0.37613355440235063 Spearman Correlation: 0.3125182383039447 Coefficient of Determination: -0.05482359828038019 RMSE: 0.6223380216816197 NRMSE: 0.1565984805821745 MAPE: 486.48465458979456 Protein: TP53 x_train_column_count: 3 x_train columns: ['mRNA_TP53', 'DNA_TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.5104700586699072 Spearman Correlation: 0.4320690064792694 Coefficient of Determination: 0.2605796807984585 RMSE: 0.3644176491006785 NRMSE: 0.0926823289251198 MAPE: 770.8957367155461 Pearson Correlation: 0.5225931726361469 Spearman Correlation: 0.4473197920173569 Coefficient of Determination: 0.2509176250319346 RMSE: 0.45710777898022775 NRMSE: 0.12243411784658571 MAPE: 195.96963234825674 Predictor: ElasticNet Pearson Correlation: 0.4899402945333089 Spearman Correlation: 0.40374939087916417 Coefficient of Determination: 0.23381960681210356 RMSE: 0.37095329131700755 NRMSE: 0.09434453859889813 MAPE: 749.4088483294638 Pearson Correlation: 0.4935730416502535 Spearman Correlation: 0.40976321400516225 Coefficient of Determination: 0.20851548690484023 RMSE: 0.4698670963108974 NRMSE: 0.12585163956365272 MAPE: 180.01651909798673 Predictor: RandomForests Pearson Correlation: 0.5602481481612476 Spearman Correlation: 0.49450872224317843 Coefficient of Determination: 0.3035120007232104 RMSE: 0.3536800233902058 NRMSE: 0.08995142892499958 MAPE: 742.620220819138 Pearson Correlation: 0.548057323604883 Spearman Correlation: 0.43321619764195557 Coefficient of Determination: 0.2707383016775887 RMSE: 0.45101971373300986 NRMSE: 0.12080345888121331 MAPE: 191.29685249447965 Protein: CTNNB1 x_train_column_count: 3 x_train columns: ['mRNA_CTNNB1', 'DNA_CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.060176286960694096 Spearman Correlation: 0.09588678934493636 Coefficient of Determination: 0.0036211855123756687 RMSE: 0.7546107795334123 NRMSE: 0.14842855616314168 MAPE: 672.4011431137344 Pearson Correlation: 0.18479039626231863 Spearman Correlation: 0.19979550867217796 Coefficient of Determination: 0.019970024413197285 RMSE: 0.670857187774057 NRMSE: 0.21485374593630424 MAPE: 275.9727827085837 Predictor: ElasticNet Pearson Correlation: 0.0518271737217569 Spearman Correlation: 0.07808903558350536 Coefficient of Determination: 0.0026860559261494554 RMSE: 0.7549648082237248 NRMSE: 0.14849819201882866 MAPE: 681.5642415402232 Pearson Correlation: 0.16859534211479751 Spearman Correlation: 0.23237945610294397 Coefficient of Determination: 0.015684830383019266 RMSE: 0.6723222539787178 NRMSE: 0.21532295900855364 MAPE: 272.72565163939026 Predictor: RandomForests Pearson Correlation: 0.3566949385868193 Spearman Correlation: 0.31791919163939997 Coefficient of Determination: 0.06471093296984132 RMSE: 0.7311116280370676 NRMSE: 0.14380637844946256 MAPE: 713.1200568376053 Pearson Correlation: 0.21668235898946392 Spearman Correlation: 0.22350020404274024 Coefficient of Determination: 0.03264593176782249 RMSE: 0.6665045657756609 NRMSE: 0.21345974262525208 MAPE: 269.14281560637244 Protein: CCNE1 x_train_column_count: 3 x_train columns: ['mRNA_CCNE1', 'DNA_CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.7402320361625656 Spearman Correlation: 0.6962274058400395 Coefficient of Determination: 0.5479434673613781 RMSE: 0.30174670538378123 NRMSE: 0.10747879087579028 MAPE: 67.51177875578747 Pearson Correlation: 0.7813352619397866 Spearman Correlation: 0.7154378483522239 Coefficient of Determination: 0.2072736304776851 RMSE: 0.577033546398293 NRMSE: 0.1392556281579972 MAPE: 90.85381339003634 Predictor: ElasticNet Pearson Correlation: 0.7385943192541282 Spearman Correlation: 0.7126097756485593 Coefficient of Determination: 0.5455215629505619 RMSE: 0.3025539334793307 NRMSE: 0.10776631646636889 MAPE: 69.04154671607486 Pearson Correlation: 0.7813741840172372 Spearman Correlation: 0.719053853539321 Coefficient of Determination: 0.25148739015219623 RMSE: 0.5607108630665741 NRMSE: 0.1353164715270348 MAPE: 91.41185328625822 Predictor: RandomForests Pearson Correlation: 0.8555901031193875 Spearman Correlation: 0.7115030650421984 Coefficient of Determination: 0.7305818210907354 RMSE: 0.23294833479894259 NRMSE: 0.08297358318751294 MAPE: 56.52821427527183 Pearson Correlation: 0.7984648767099046 Spearman Correlation: 0.7309889859775095 Coefficient of Determination: 0.6102477638034867 RMSE: 0.40460730300332876 NRMSE: 0.09764396626283968 MAPE: 78.44368259757474 Protein: CCND1 x_train_column_count: 3 x_train columns: ['mRNA_CCND1', 'DNA_CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.4264902312703588 Spearman Correlation: 0.4082172466956049 Coefficient of Determination: 0.18189391736904414 RMSE: 0.2058793936818677 NRMSE: 0.1296731039515946 MAPE: 597.3773050657828 Pearson Correlation: 0.35668852865577205 Spearman Correlation: 0.26432997917679774 Coefficient of Determination: 0.12597206418327112 RMSE: 0.25799253018654944 NRMSE: 0.1648282862387073 MAPE: 243.54708460171094 Predictor: ElasticNet Pearson Correlation: 0.42062428294537874 Spearman Correlation: 0.4200312722165109 Coefficient of Determination: 0.1769040216303327 RMSE: 0.20650630197971911 NRMSE: 0.1300679620450715 MAPE: 590.6703680032789 Pearson Correlation: 0.3596578734450679 Spearman Correlation: 0.27994613399169566 Coefficient of Determination: 0.12718462380997775 RMSE: 0.25781350850533435 NRMSE: 0.16471391146633338 MAPE: 243.99563231907155 Predictor: RandomForests Pearson Correlation: 0.49268066932663374 Spearman Correlation: 0.44978518155098807 Coefficient of Determination: 0.23905745780751642 RMSE: 0.19855645127304497 NRMSE: 0.1250607498192614 MAPE: 545.558550562691 Pearson Correlation: 0.3912694969552766 Spearman Correlation: 0.3008115144081272 Coefficient of Determination: 0.15006617485900264 RMSE: 0.25441167161808803 NRMSE: 0.16254051929957963 MAPE: 251.77277359936053 Protein: ERBB2 x_train_column_count: 3 x_train columns: ['mRNA_ERBB2', 'DNA_ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.8292610082637569 Spearman Correlation: 0.6311411442698738 Coefficient of Determination: 0.6876738198266225 RMSE: 0.5744651033365087 NRMSE: 0.0978695850446375 MAPE: 257.5384239058391 Pearson Correlation: 0.7904280538782545 Spearman Correlation: 0.5733662514495194 Coefficient of Determination: 0.621002278646612 RMSE: 0.5341928207160388 NRMSE: 0.11819732729639093 MAPE: 299.5227220475491 Predictor: ElasticNet Pearson Correlation: 0.8273791509892983 Spearman Correlation: 0.6380593161863881 Coefficient of Determination: 0.6843054870201384 RMSE: 0.5775545026039753 NRMSE: 0.09839591505596118 MAPE: 259.85978657116164 Pearson Correlation: 0.7792639028187881 Spearman Correlation: 0.5816805695831619 Coefficient of Determination: 0.6035453979459267 RMSE: 0.5463569593153955 NRMSE: 0.12088880613240303 MAPE: 277.29613762845867 Predictor: RandomForests Pearson Correlation: 0.8422875254197999 Spearman Correlation: 0.6641902978837151 Coefficient of Determination: 0.707966488581793 RMSE: 0.5554894337190149 NRMSE: 0.0946367674189507 MAPE: 525.5259546001823 Pearson Correlation: 0.7770231374392905 Spearman Correlation: 0.6032940377474442 Coefficient of Determination: 0.5990953212604824 RMSE: 0.5494147440549729 NRMSE: 0.12156538202344794 MAPE: 247.3352776119546 Protein: ERBB3 x_train_column_count: 3 x_train columns: ['mRNA_ERBB3', 'DNA_ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.3815490801746107 Spearman Correlation: 0.4097841038722461 Coefficient of Determination: 0.14557970058209158 RMSE: 0.43343648776968763 NRMSE: 0.1169720677187206 MAPE: 211.9632382914037 Pearson Correlation: 0.5134907213506094 Spearman Correlation: 0.5530268457212684 Coefficient of Determination: 0.22428240688006973 RMSE: 0.3672451402059172 NRMSE: 0.1776843588308322 MAPE: 191.81520589969224 Predictor: ElasticNet Pearson Correlation: 0.3773884363248901 Spearman Correlation: 0.41142820549776254 Coefficient of Determination: 0.1424220318453311 RMSE: 0.43423667162244534 NRMSE: 0.11718801437400528 MAPE: 211.5703984107923 Pearson Correlation: 0.5207896565156245 Spearman Correlation: 0.5619845633985462 Coefficient of Determination: 0.2314532053506414 RMSE: 0.3655437767566056 NRMSE: 0.1768611874923098 MAPE: 189.6681080447603 Predictor: RandomForests Pearson Correlation: 0.46486685418215473 Spearman Correlation: 0.437387903066299 Coefficient of Determination: 0.21474829969107045 RMSE: 0.41552210494535907 NRMSE: 0.11213748996628203 MAPE: 251.59688507859425 Pearson Correlation: 0.5424618846414083 Spearman Correlation: 0.5501866300948342 Coefficient of Determination: 0.26533840065127934 RMSE: 0.35739453453943376 NRMSE: 0.17291833646505475 MAPE: 217.8774055862619
All Interaction Partners
ZScore
scenario = Scenario.AllInteractionPartners_Mutations
normalizeTechnique = NormalizeTechnique.ZScore
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.648331 | 0.348611 | 0.770359 | -0.860535 | -0.0703 | -0.190586 | 0.719543 | 0.931178 | -0.283665 | -0.568745 | ... | 0.238689 | -0.239582 | -0.271725 | -0.222943 | -0.211122 | 0.792968 | -0.619672 | -0.946953 | -0.457066 | 0.454464 |
| TCGA-A1-A0SH-01 | -0.757220 | -0.562180 | -0.708360 | -0.860535 | -0.0703 | -0.190586 | -0.527186 | -0.611509 | -0.283665 | -0.568745 | ... | 0.739490 | -0.107967 | -1.200905 | -0.903627 | 1.252346 | 0.854083 | 0.108510 | -0.031025 | 0.991113 | -0.083768 |
| TCGA-A1-A0SJ-01 | -0.405237 | 0.254851 | -0.925065 | -0.223237 | -0.0703 | -0.190586 | -0.525012 | -0.390046 | -0.283665 | 1.475888 | ... | 0.592975 | 5.821247 | -1.079296 | -0.618408 | 0.444358 | -0.369825 | -0.573411 | -0.555512 | -0.488416 | -0.083768 |
| TCGA-A1-A0SK-01 | 3.940101 | 14.857648 | -0.228301 | -0.311392 | -0.0703 | -0.004913 | -0.697917 | -0.754652 | -0.283665 | -0.568745 | ... | 0.051750 | -0.027856 | 2.390553 | 0.357970 | 1.337526 | -1.597758 | 1.043918 | 0.590450 | -0.467061 | -0.083768 |
| TCGA-A1-A0SQ-01 | -1.114818 | -1.129592 | -0.842620 | -0.860535 | -0.0703 | -0.190586 | -0.507239 | -0.137487 | -0.283665 | -0.568745 | ... | 1.412610 | -0.008283 | -0.929428 | -0.853107 | 0.062384 | -0.434733 | -1.040418 | -0.606257 | -0.580936 | -0.083768 |
5 rows × 20133 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 Protein Interaction Partners Count: 369 x_train_column_count: 366 x_train columns: ['AATF', 'ABCC1', 'ABL1', 'ACTL6A', 'ACTL6B', 'AFAP1', 'AHR', 'AKT1', 'ANXA5', 'ARID1A', 'ARID1B', 'ARID4A', 'ARMCX1', 'ARMCX2', 'ARMCX3', 'ARNT', 'AR', 'ASF1A', 'ATF2', 'ATM', 'AURKB', 'BCR', 'BDP1', 'BGLAP', 'BRCA1', 'BRF1', 'FAM208A', 'C4BPA', 'CABIN1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CBFB', 'CBX1', 'CBX4', 'CBX5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNT2', 'CDC25A', 'CDC27', 'CDC6', 'CDH1', 'CDK14', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPA', 'CEBPB', 'CEBPD', 'CEBPE', 'CHEK1', 'CHEK2', 'CLNK', 'COL1A1', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUX1', 'DCAF10', 'DGKZ', 'DNAJA3', 'DNMT1', 'DNMT3A', 'DUSP1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EGFR', 'EGF', 'EID1', 'EIF2AK1', 'EIF2AK4', 'AGO2', 'ELF1', 'ENC1', 'EP300', 'ERBB2', 'ESD', 'ESR1', 'ESR2', 'EZH2', 'FBXW7', 'FMO5', 'FOS', 'FOXM1', 'FRK', 'FZR1', 'G6PD', 'GAPDH', 'GATA1', 'GJA1', 'GNB2L1', 'GRB2', 'GSC', 'GTF2H1', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HARS2', 'HARS', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC8', 'HDC', 'HES1', 'HIF1A', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HIST4H4', 'HMGA1', 'HMGA2', 'HRAS', 'HSP90AA1', 'HSPA1A', 'HSPA8', 'ID2', 'IFI16', 'INS', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'KDM2A', 'KDM4A', 'KDM5A', 'KDM5B', 'PPP1R26', 'KIF11', 'KRAS', 'KRT10', 'KRT14', 'KRT5', 'L3MBTL2', 'L3MBTL1', 'LIMD1', 'LIN52', 'LIN54', 'LIN9', 'LMNA', 'LOR', 'LPAR6', 'MAF', 'MAP2K7', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEF2C', 'MORF4L1', 'MRFAP1', 'MRPL11', 'MRPS18B', 'MSH6', 'MTL5', 'MYBL2', 'MYC', 'MYOD1', 'NACC2', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NCR1', 'NDC80', 'NEO1', 'NFYA', 'NFYB', 'NFYC', 'NGF', 'NOTCH1', 'NPM1', 'NRAS', 'ORC1', 'PA2G4', 'PAX2', 'PAX3', 'PAX5', 'PAX6', 'PAX8', 'PCNA', 'PELP1', 'PGR', 'PHB', 'PHF21B', 'PIAS4', 'PIK3CA', 'PIK3R1', 'PIK3R3', 'PLK1', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPIA', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP1R3A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R3B', 'PPRC1', 'PRB1', 'PRB3', 'PRB4', 'PRDM2', 'PRH1', 'PRH2', 'PRIM1', 'PRIM2', 'PRKCB', 'PRMT2', 'PSMA7', 'PSMC1', 'PSMD10', 'PTEN', 'PTGDR', 'RAF1', 'RB1CC1', 'RBAK', 'RBBP4', 'RBBP5', 'RBBP6', 'RBBP7', 'RBBP8', 'RBBP9', 'RBL1', 'RBL2', 'RBFOX2', 'RFC1', 'RPS6KB1', 'RUNX2', 'S100A6', 'SETD1B', 'SETD7', 'SIRT1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMC1A', 'SMC2', 'SMC4', 'SMC5', 'SMYD2', 'SNW1', 'SP100', 'SP1', 'SP3', 'SPI1', 'STAM', 'STAT3', 'SUV39H1', 'SUV420H2', 'SUZ12', 'TAF1', 'TBP', 'TERT', 'TFAP2A', 'TFDP1', 'TFDP3', 'TGM2', 'THAP1', 'TMPO', 'TNS1', 'TOP2A', 'TP53BP1', 'TP53', 'TP73', 'TRDMT1', 'TRIM27', 'TTK', 'UBE2I', 'UBE3A', 'UBL4A', 'UBN1', 'UBR4', 'UBTF', 'UHRF1', 'USP4', 'USP7', 'VEGFA', 'VPS39', 'WDR59', 'WDR73', 'WEE1', 'WWTR1', 'YAP1', 'YY1', 'ZBTB16', 'ZBTB7A', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.8238688799604209 Spearman Correlation: 0.730651042724117 Coefficient of Determination: 0.6787599313672386 RMSE: 0.12701659236896778 NRMSE: 0.04810323513310652 MAPE: 315.9840971415523 Pearson Correlation: -0.05427703259829596 Spearman Correlation: -0.06392059311286705 Coefficient of Determination: -115.53290510965053 RMSE: 3.0276446128979213 NRMSE: 1.4957018781946325 MAPE: 575.8675751606362 Predictor: ElasticNet Pearson Correlation: 0.4762804285438447 Spearman Correlation: 0.44239173594758036 Coefficient of Determination: 0.1778476847284105 RMSE: 0.20319908325458183 NRMSE: 0.07695477494966173 MAPE: 228.34577511841673 Pearson Correlation: 0.28225007056064544 Spearman Correlation: 0.3741147205150718 Coefficient of Determination: 0.04023938092467416 RMSE: 0.27476541854039094 NRMSE: 0.1357382404866991 MAPE: 129.14617543177496 Predictor: RandomForests Pearson Correlation: 0.5790069642120295 Spearman Correlation: 0.41688376525416515 Coefficient of Determination: 0.18390469711120883 RMSE: 0.20244918898417993 NRMSE: 0.07667077787698538 MAPE: 220.53623517082016 Pearson Correlation: 0.2712057000736925 Spearman Correlation: 0.34967362900429494 Coefficient of Determination: 0.0075019447596392785 RMSE: 0.2794122493756406 NRMSE: 0.1380338446597672 MAPE: 117.03651684548917 Protein: CDH1 Protein Interaction Partners Count: 834 x_train_column_count: 826 x_train columns: ['ABCB1', 'ABCG2', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTR3', 'ACVR1B', 'ADAM10', 'ADAM15', 'ADAM17', 'ADAM9', 'AFP', 'AIMP1', 'AJAP1', 'AKAP9', 'AKT1', 'AKT2', 'AKTIP', 'ALB', 'ALCAM', 'ALDH1A1', 'ALDH3A1', 'ALK', 'AMOTL2', 'ANAPC4', 'ANAPC7', 'ANO1', 'ANXA2', 'ANXA5', 'AP1M1', 'AP1M2', 'APC2', 'APC', 'AQP1', 'AQP5', 'AREG', 'ARF6', 'ARHGAP31', 'ARID1A', 'ARL2BP', 'ARMC7', 'ARPC1A', 'ARPC2', 'ARRB2', 'ARVCF', 'AR', 'CLMP', 'ASF1A', 'ATF2', 'ATF3', 'ATM', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BAG3', 'BANP', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL6B', 'BCL9L', 'BCORL1', 'BMI1', 'BMP2', 'BMP4', 'BMP6', 'BMP7', 'BNIP3', 'BRCA1', 'BRCA2', 'BSG', 'BTBD7', 'BTC', 'BTF3', 'ANAPC15', 'CA2', 'CA9', 'CALCA', 'CALR', 'CAPN1', 'CAPNS1', 'CASP3', 'CASP8', 'CASP9', 'CASS4', 'CAV1', 'CBLL1', 'CBL', 'CBX7', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CCR7', 'CD1A', 'CD1B', 'CD1C', 'CD1E', 'CD207', 'CD24', 'CD274', 'CD276', 'CD2AP', 'CD34', 'CD44', 'CD46', 'CD68', 'CD82', 'CDC16', 'CDC23', 'CDC27', 'CDC42', 'CDC6', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH24', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK14', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN3', 'CDX2', 'CEACAM5', 'CFL1', 'CGN', 'CHGA', 'CHL1', 'CLCA2', 'CLDN1', 'CLDN2', 'CLDN3', 'CLDN4', 'CLDN5', 'CLDN7', 'CNTN1', 'COL1A1', 'CORO1C', 'CRB3', 'CREB1', 'CREBBP', 'CRYAB', 'YBX3', 'CSDC2', 'CSE1L', 'CSF2', 'CSNK2A1', 'CSNK2A2', 'CST5', 'CTBP1', 'CTBP2', 'CTCF', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTSL', 'CTTN', 'CXCL12', 'CXCL1', 'CXCR4', 'CYP1B1', 'DAAM1', 'DAB2IP', 'DACH1', 'DAPK1', 'DAP', 'DDR1', 'DDR2', 'DDX3X', 'DICER1', 'DKK1', 'DLC1', 'DLG1', 'DLG5', 'DNM2', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOT1L', 'DPAGT1', 'DPEP1', 'DSP', 'DUOX1', 'DUSP4', 'DVL1', 'DVL2', 'E2F1', 'ECT2', 'EDN1', 'EFEMP1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'EHD1', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'ELAVL1', 'ELF3', 'ENAH', 'ENG', 'EP300', 'EPB41L3', 'EPCAM', 'EPHA10', 'EPHA1', 'EPHA2', 'EPPK1', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ESRP1', 'ESRP2', 'ETS1', 'ETS2', 'EXOC3', 'EXOC4', 'EYA2', 'EZH2', 'EZR', 'F11R', 'F2RL2', 'SUPT20H', 'FBXL5', 'FER', 'FGF10', 'FGF13', 'FGF17', 'FGF19', 'FGF2', 'FGF4', 'FGF5', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FMN1', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC1', 'FOXC2', 'FOXJ2', 'FOXK2', 'FOXL1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXQ1', 'FRMPD2', 'FSCN1', 'FUT4', 'FXYD5', 'FYN', 'FZD1', 'FZD4', 'FZD7', 'FZR1', 'G6PD', 'GAB2', 'GABPA', 'GADD45A', 'GAPDH', 'GAS6', 'GATA1', 'GATA3', 'GATA4', 'GATA6', 'GDNF', 'GFRA1', 'GGT1', 'GJA1', 'GJB1', 'GJB2', 'GKN2', 'GLI1', 'GLI2', 'GMNN', 'GNA12', 'GNA13', 'GNB2L1', 'GNL3', 'GPA33', 'GRB2', 'GRHL2', 'GRHL3', 'GSK3B', 'GSN', 'GSTP1', 'H2AFZ', 'HAVCR2', 'HBEGF', 'HDAC1', 'HDAC2', 'HEPACAM', 'HES1', 'HGF', 'HGS', 'HIF1A', 'HMGA2', 'HNF4A', 'HOXB4', 'HOXD10', 'HPGDS', 'HPGD', 'HRAS', 'HSP90AA1', 'HSPA5', 'ICAM1', 'ID1', 'ID2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP3', 'IL10', 'IL15', 'IL17A', 'IL1B', 'IL24', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IQSEC1', 'IRS1', 'IRS2', 'ITGA5', 'ITGA6', 'ITGAE', 'ITGAM', 'ITGB1', 'ITGB4', 'ITGB7', 'ITPKB', 'IVL', 'JAG1', 'JAK2', 'AJUBA', 'JUN', 'JUP', 'KDM1A', 'KDM6A', 'KDR', 'KEAP1', 'KIFC3', 'KIT', 'KLF4', 'KLF5', 'KLF8', 'KLK3', 'KLK7', 'KLRG1', 'KRAS', 'KRT10', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'KRT9', 'LAMA1', 'LAMB1', 'LAMC2', 'LASP1', 'LATS1', 'LATS2', 'LCN2', 'LEF1', 'LEP', 'LGALS3', 'LGALS4', 'LGALS9', 'LGR5', 'LIF', 'LIMA1', 'LIN28A', 'LIPG', 'LLGL2', 'LMNA', 'LOR', 'LOXL2', 'LOXL3', 'LOX', 'LRP5', 'LRP6', 'LY6K', 'MACC1', 'MACROD1', 'MAD2L2', 'MAGI1', 'MAP2K1', 'MAP2K7', 'MAP4K5', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARK2', 'MARVELD2', 'MCAM', 'MCL1', 'MDM2', 'MED1', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGAT5', 'MGMT', 'MKI67', 'MLH1', 'MLLT4', 'MME', 'MMP11', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP1', 'MMP25', 'MMP27', 'MMP2', 'MMP3', 'MMP7', 'MMP8', 'MMP9', 'MPP5', 'MRAP', 'MSH2', 'MSN', 'MT1G', 'MTA1', 'MTA3', 'MTBP', 'MTDH', 'MTOR', 'MUC1', 'MUC4', 'MYCN', 'MYC', 'MYH6', 'MYO6', 'MYO7A', 'NANOG', 'NCAM1', 'NCOA1', 'NCSTN', 'NDRG1', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEUROG3', 'NF2', 'NFE2L2', 'NFIC', 'NKD2', 'NKX2-1', 'NKX6-1', 'NKX6-2', 'NME1', 'NOG', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NR2F1', 'NRP2', 'NUDT21', 'NUMBL', 'NUMB', 'NUP98', 'NUTF2', 'OTUB1', 'OVOL1', 'OVOL2', 'PARD3', 'PARD6A', 'PAX2', 'PAX5', 'PAX6', 'PAX8', 'PCSK9', 'PDCD4', 'PDGFRB', 'PDPN', 'PEBP1', 'PECAM1', 'PGR', 'PHLPP1', 'PI3', 'PIK3CA', 'PIK3R1', 'PIP5K1A', 'PIP5K1C', 'PIP', 'PIR', 'PITX1', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAUR', 'PLAU', 'PLCD1', 'PLEKHA7', 'PLG', 'PODXL', 'POLR2C', 'POSTN', 'POTEF', 'POU5F1', 'PPARA', 'PPARGC1A', 'PPARG', 'PPL', 'PPP6C', 'PRAME', 'PRDM10', 'PRKAR1A', 'PRKCA', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRKG1', 'PRMT5', 'PROC', 'PROM1', 'PRSS8', 'PSEN1', 'PTCH1', 'PTEN', 'PTF1A', 'PTGS2', 'PTK2', 'PTPN11', 'PTPN14', 'PTPRC', 'PTPRF', 'PTPRJ', 'PTPRM', 'PTPRS', 'PTPRT', 'PTPRU', 'PTRH2', 'PVRL1', 'PVRL2', 'PVR', 'PXN', 'RAB11A', 'RAB25', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RACGAP1', 'RAF1', 'RALA', 'RALBP1', 'RALGDS', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RARB', 'RASSF1', 'RB1', 'RBM4', 'RCOR1', 'RDX', 'REM1', 'RET', 'RHOA', 'RHOB', 'RHOC', 'RHOD', 'RICTOR', 'RND3', 'ROCK1', 'ROCK2', 'RPS6KB1', 'RPTOR', 'RRM2', 'RUNX2', 'RUNX3', 'S100A14', 'S100A4', 'S100A8', 'SATB1', 'SCRIB', 'SDC1', 'SDC4', 'SDHC', 'SELE', 'SELL', 'SELP', 'SEMA3C', 'SEMA3F', 'SENP1', 'SERPINB4', 'SERPINB5', 'SERPINE1', 'SFN', 'SFRP1', 'SFRP2', 'SFTPC', 'SHH', 'SIK1', 'SIN3A', 'SIRT1', 'SIRT2', 'SIRT4', 'SIRT7', 'SIX1', 'SIX2', 'SKIL', 'SKP2', 'SLC2A1', 'SLC39A6', 'SLC6A3', 'SLC9A3R1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SNAI1', 'SNAI2', 'SNAI3', 'SNX16', 'SNX1', 'SOX10', 'SOX17', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPARC', 'SPDEF', 'SPINT1', 'SPP1', 'SPRY1', 'SRCIN1', 'SRC', 'SRXN1', 'ST14', 'ST7L', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STX4', 'STYK1', 'SUCLG2', 'SUMO1', 'SUZ12', 'SYNJ2', 'SYP', 'TACC3', 'TACSTD2', 'TATDN1', 'TBX1', 'TBX3', 'TCF15', 'TCF4', 'TDGF1', 'TERT', 'TET2', 'TFF1', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBI', 'TGFBR1', 'TGFBR2', 'THBS1', 'THEM4', 'THUMPD1', 'THY1', 'TIAM1', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLN1', 'TLR4', 'TMPRSS2', 'TMPRSS4', 'TNFRSF6B', 'TNF', 'TNK2', 'TNS1', 'TP53BP1', 'TP53BP2', 'TP53', 'TRIM21', 'TRIM29', 'TRIM44', 'TRIP10', 'TRPS1', 'TSPYL2', 'TWIST1', 'TWIST2', 'TYRP1', 'T', 'UBE2I', 'UBE2S', 'USP48', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VEZT', 'VHL', 'VIM', 'VIPAS39', 'VPS33B', 'VTN', 'WASL', 'WDFY2', 'WDTC1', 'WIF1', 'WISP1', 'WISP3', 'WNT10A', 'WNT10B', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT9A', 'WNT9B', 'WT1', 'XIAP', 'YAP1', 'YBX1', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 4.768125341370121e-15 NRMSE: 8.014598929907923e-16 MAPE: 3.4958588468854277e-12 Pearson Correlation: 0.332196892388519 Spearman Correlation: 0.38814749780509217 Coefficient of Determination: -2.7055079077392836 RMSE: 2.2335524376657685 NRMSE: 0.361755763931484 MAPE: 1163.6785899984443 Predictor: ElasticNet Pearson Correlation: 0.8917974591223857 Spearman Correlation: 0.8515977566839639 Coefficient of Determination: 0.7735312158081944 RMSE: 0.5370062938061637 NRMSE: 0.09026377789087182 MAPE: 379.8571823969822 Pearson Correlation: 0.5713493773416223 Spearman Correlation: 0.55924787825578 Coefficient of Determination: 0.25914303065384825 RMSE: 0.9987101555977408 NRMSE: 0.16175539431792635 MAPE: 409.19891475302245 Predictor: RandomForests Pearson Correlation: 0.7559597974811081 Spearman Correlation: 0.7072839403758547 Coefficient of Determination: 0.5645761922122592 RMSE: 0.7446141538285428 NRMSE: 0.12515996063882184 MAPE: 192.1172879405309 Pearson Correlation: 0.7645302684149959 Spearman Correlation: 0.6921577067580342 Coefficient of Determination: 0.5782555357320693 RMSE: 0.7535238037316196 NRMSE: 0.12204395771624173 MAPE: 126.28616103041732 Protein: CDH2 Protein Interaction Partners Count: 472 x_train_column_count: 467 x_train columns: ['ABCG2', 'ABL1', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTR3', 'ADAM10', 'ADH1A', 'AFP', 'AHSG', 'AKT1', 'AKT3', 'ALB', 'ALCAM', 'ALDH1A1', 'AMBN', 'AMELX', 'AMOTL1', 'AMTN', 'ANGPT1', 'ANO8', 'ANXA5', 'APC2', 'APC', 'APLP2', 'APOA1', 'APOA2', 'APOA5', 'APOB', 'APOE', 'APOL1', 'APPL1', 'APP', 'ARHGAP32', 'ARMC7', 'ARPC5', 'ARVCF', 'AR', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BCL2L1', 'BDNF', 'BMI1', 'BMP15', 'BMP2', 'BMP4', 'BMP7', 'BNIP2', 'BOC', 'BPIFB2', 'RGCC', 'GSKIP', 'C3', 'C4A', 'CABLES1', 'CADM1', 'CALU', 'CASP3', 'CAV1', 'CBLL1', 'CCNA2', 'CCNB1', 'CCND1', 'CD24', 'CD34', 'CD44', 'CD80', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK4', 'CDK5', 'CDK6', 'CDKN2A', 'CDON', 'CDX2', 'CEBPZ', 'CFL1', 'CHGB', 'CHL1', 'CHRDL1', 'CKAP4', 'CLDN11', 'CLDN3', 'CLDN4', 'CLDN7', 'CORT', 'CP', 'CREBBP', 'CRP', 'CSF1', 'CSK', 'CST3', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTTN', 'CXCL12', 'CXCR4', 'CYLD', 'CYR61', 'DBN1', 'DDR1', 'DDR2', 'DKK1', 'DLG4', 'DLG5', 'DMP1', 'DNAJC3', 'DSP', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EFNB2', 'EFNB3', 'EGFR', 'EGF', 'EHMT2', 'EIF2AK3', 'ENAM', 'ENG', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA4', 'EPHB2', 'EPS8', 'ERBB2', 'ERBB4', 'ESR1', 'ESRP1', 'EXOC4', 'EZH2', 'EZR', 'F11R', 'F5', 'EVA1A', 'FAM20A', 'FAM20C', 'FBN1', 'FER', 'FGA', 'FGF13', 'FGF23', 'FGF2', 'FGFR1', 'FGFR4', 'FGG', 'FN1', 'FOXC2', 'FOXD3', 'FOXO1', 'FOXP4', 'FSTL1', 'FSTL3', 'FUCA2', 'GAA', 'GAPDH', 'GAS6', 'GATA4', 'GFAP', 'GJA10', 'GJA1', 'GJA3', 'GJB6', 'GJC1', 'GJC3', 'GJD3', 'GJD4', 'GLI1', 'GOLM1', 'GPC3', 'GRIA1', 'GRIA2', 'HGF', 'HMGA2', 'HNF4A', 'HRAS', 'HRC', 'HSP90B1', 'HSPA5', 'IARS2', 'IGF1R', 'IGF1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL1B', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'INVS', 'IQGAP1', 'ISL1', 'ITGA6', 'ITGB1', 'ITIH2', 'ITPKB', 'JAG1', 'JAM3', 'JUN', 'JUP', 'KCNA5', 'KDR', 'KIAA2022', 'KIF5B', 'KIT', 'KLF4', 'KNG1', 'KRAS', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT8', 'KTN1', 'L1CAM', 'LAMB1', 'LAMB2', 'LAMC1', 'LEF1', 'LGALS1', 'LRP5', 'LRP6', 'LRRC7', 'LTBP1', 'LTBP3', 'MAP1B', 'MAP2K6', 'MAP2K7', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MATN3', 'MBTPS1', 'MCAM', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEPE', 'MET', 'MFGE8', 'MFI2', 'MGAT4A', 'MIA3', 'MKI67', 'MLLT4', 'MMP14', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MPDZ', 'MPP5', 'MRAP', 'MRPL49', 'MSLN', 'MSN', 'MTHFD1', 'MUC1', 'MUC4', 'MXRA8', 'MYC', 'MYO10', 'MZF1', 'NANOG', 'NCAM1', 'NCSTN', 'NDRG1', 'NENF', 'NES', 'NFASC', 'NGF', 'NKX2-5', 'NLGN1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTUM', 'NRCAM', 'NT5C', 'NT5E', 'NTRK2', 'NUCB1', 'NUMBL', 'NUMB', 'OLFM3', 'P4HB', 'PARD3', 'PAX6', 'PCSK9', 'PC', 'PDGFRB', 'PDIA4', 'PDIA6', 'PECAM1', 'PENK', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PITX2', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PNPLA2', 'POU5F1', 'PPT2', 'PRKCDBP', 'PRKCSH', 'PROC', 'PROM1', 'PRPH', 'PRSS23', 'PSEN1', 'PTEN', 'PTK2', 'PTPN11', 'PTPN1', 'PTPN2', 'PTPRC', 'PTPRS', 'PVRL1', 'PVRL2', 'PVRL3', 'PXN', 'QSOX1', 'RAB11FIP1', 'RAB3D', 'RAB5A', 'RAC1', 'RCN1', 'RELN', 'REM1', 'RHOA', 'RHOB', 'RHOC', 'ROBO1', 'PTBP3', 'RPS6KB1', 'RUNX2', 'S100A14', 'S100A4', 'SARS2', 'SCARB2', 'SCG2', 'SCG3', 'SDC2', 'SEMA3A', 'SENP3', 'SERPINA10', 'SERPINA1', 'SERPINC1', 'SERPIND1', 'SERPINE1', 'SHH', 'SHISA5', 'SIRT7', 'SKP1', 'SLC2A1', 'SLC9A3R1', 'SLIT1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SNAI1', 'SNAI2', 'SNAI3', 'SOX10', 'SOX18', 'SOX1', 'SOX2', 'SOX4', 'SOX9', 'SP7', 'SPAG9', 'SPARCL1', 'SPARC', 'SPP1', 'SPP2', 'SRC', 'ST6GALNAC5', 'STAT3', 'STC2', 'SYP', 'TBX1', 'TCF3', 'TEK', 'TF', 'TGFB1', 'TGFBR1', 'TGM2', 'TGOLN2', 'THY1', 'TIMP1', 'TJP1', 'TJP3', 'TMEM132A', 'TNC', 'TNF', 'TNNT1', 'TP53', 'TRPS1', 'TSC2', 'TWIST1', 'TWIST2', 'USP9X', 'VANGL2', 'VCAM1', 'VCAN', 'VCL', 'VEGFA', 'VGF', 'VIM', 'VTN', 'VWA1', 'WFS1', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7A', 'XIRP1', 'ZBTB16', 'ZEB1', 'ZEB2', 'ZSCAN1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.9457695633859379 Spearman Correlation: 0.924852939002695 Coefficient of Determination: 0.8944800670272276 RMSE: 0.12057818496431942 NRMSE: 0.04454524412488203 MAPE: 2735.574371349798 Pearson Correlation: -0.041539442406826096 Spearman Correlation: -0.00762364647351478 Coefficient of Determination: -4035.1547689499876 RMSE: 23.831332462090778 NRMSE: 12.298773010316756 MAPE: 2254.2602750898354 Predictor: ElasticNet Pearson Correlation: 0.6421335059763729 Spearman Correlation: 0.6244463375443264 Coefficient of Determination: 0.3639506640261706 RMSE: 0.2960376109028938 NRMSE: 0.10936528570004982 MAPE: 911.1792775488213 Pearson Correlation: 0.15645974249732747 Spearman Correlation: 0.21579845868695738 Coefficient of Determination: -0.017402103244953837 RMSE: 0.3783648078203302 NRMSE: 0.1952649057234506 MAPE: 120.54825363929413 Predictor: RandomForests Pearson Correlation: 0.5713874422244214 Spearman Correlation: 0.49981627485692354 Coefficient of Determination: 0.1934604792708685 RMSE: 0.33336063546965655 NRMSE: 0.12315354467324126 MAPE: 881.891873830838 Pearson Correlation: 0.1583024608594388 Spearman Correlation: 0.1951077943615257 Coefficient of Determination: 0.024041650405892456 RMSE: 0.37057836575772324 NRMSE: 0.19124651171890553 MAPE: 105.64700580687712 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.5729780199091095 Spearman Correlation: 0.5407177293306035 Coefficient of Determination: 0.3283038112989639 RMSE: 0.1711261830213943 NRMSE: 0.12005821899126838 MAPE: 542.8036872086952 Pearson Correlation: 0.03383032500829817 Spearman Correlation: 0.3885523363574286 Coefficient of Determination: -2.4388972684261234 RMSE: 0.37937730193698593 NRMSE: 0.2903745872109558 MAPE: 346.69398891044625 Predictor: ElasticNet Pearson Correlation: 0.4716026109339677 Spearman Correlation: 0.4777443068118792 Coefficient of Determination: 0.2009968420789089 RMSE: 0.1866398038504274 NRMSE: 0.13094222080767484 MAPE: 511.6524435985694 Pearson Correlation: 0.5086120074436036 Spearman Correlation: 0.555053165544825 Coefficient of Determination: 0.22426298367642428 RMSE: 0.18018515190124973 NRMSE: 0.1379133354518907 MAPE: 252.5972478233991 Predictor: RandomForests Pearson Correlation: 0.5488348194628491 Spearman Correlation: 0.5498808348759677 Coefficient of Determination: 0.26165640371302934 RMSE: 0.17941521825494025 NRMSE: 0.12587361666872948 MAPE: 552.0017208748178 Pearson Correlation: 0.4711648997100896 Spearman Correlation: 0.5027704614183982 Coefficient of Determination: 0.20767549842787159 RMSE: 0.1821014003704093 NRMSE: 0.1393800279909142 MAPE: 358.2338803004399 Protein: PTEN Protein Interaction Partners Count: 884 x_train_column_count: 876 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ABTB1', 'ACTB', 'ACTG1', 'ADM', 'AEBP1', 'AFP', 'AKT1S1', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'AMHR2', 'ANXA2', 'ANXA5', 'APAF1', 'APC', 'ARAF', 'AREG', 'ARHGAP21', 'ARID1A', 'ARID2', 'ARL2BP', 'AR', 'ATF3', 'ATG12', 'ATG5', 'ATG7', 'ATM', 'ATRX', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'AXL', 'BAD', 'BAG5', 'BARD1', 'BAX', 'BBC3', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BIRC3', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BNIP3', 'BRAF', 'BRCA1', 'BRCA2', 'BRD4', 'BTG2', 'BTK', 'SPRTN', 'CLHC1', 'CA9', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBL', 'CBX7', 'CCL2', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD24', 'CD274', 'CD34', 'CD44', 'CD79A', 'CD79B', 'CDC14A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC7', 'CDH17', 'CDH1', 'CDH2', 'CDIPT', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CENPC', 'CFL1', 'CFLAR', 'CFTR', 'CHD1', 'CHD8', 'CHEK1', 'CHEK2', 'CHKA', 'CHORDC1', 'CHUK', 'CLTCL1', 'CLTC', 'CNOT6L', 'CREB1', 'CREBBP', 'CRP', 'CSF1R', 'CSF1', 'CSK', 'CSN2', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTGF', 'CTLA4', 'CTNNB1', 'CUL1', 'CUL3', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'DAPK1', 'DAXX', 'DBN1', 'DCAF13', 'DDIT4', 'DDR2', 'DECR1', 'DEPTOR', 'DGCR8', 'DICER1', 'DLC1', 'DLG1', 'DLG4', 'DNM1L', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOLPP1', 'DUSP1', 'DUSP6', 'DUT', 'DVL1', 'DYRK1A', 'E2F1', 'E2F2', 'E2F3', 'ECSCR', 'EGFR', 'EGF', 'EGR1', 'EIF2AK2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4EBP2', 'EIF4E', 'EIF4G1', 'EML4', 'ENDOG', 'EP300', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA3', 'EPHA4', 'EPHA5', 'EPHA7', 'EPHB1', 'EPHB2', 'EPHB3', 'EPHB4', 'ERBB2', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ESR1', 'ETS1', 'ETS2', 'ETV1', 'ETV6', 'EYA2', 'EZH2', 'EZR', 'FABP4', 'FASLG', 'FASN', 'FBXW7', 'FCGR1B', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FIG4', 'FKBP1A', 'FLCN', 'FLT1', 'FLT3', 'FLT4', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXG1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FOXP3', 'FRK', 'FYN', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GCK', 'GDF10', 'GDF2', 'GFAP', 'GJA1', 'GLI1', 'GNA11', 'GNAQ', 'GNAS', 'GNRHR', 'GRASP', 'GRB2', 'GRPR', 'GSK3A', 'GSK3B', 'GSTP1', 'H1F0', 'H2AFX', 'HAVCR2', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HES1', 'HGF', 'HIF1A', 'HIST1H2BA', 'HK1', 'HK2', 'HMGA2', 'HNF4A', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA1A', 'HSPA1B', 'HSPA2', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'ID1', 'ID4', 'IDH1', 'IDH2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL17A', 'IL21', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INPP4A', 'INPP4B', 'INPP5A', 'INPP5B', 'INPP5D', 'INPP5E', 'INPP5F', 'INPP5J', 'INPP5K', 'INPPL1', 'INSRR', 'INSR', 'INS', 'IPMK', 'IPO11', 'IQGAP1', 'IRAK1', 'IRS1', 'IRS2', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'ITPR3', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUN', 'KAT2B', 'KDM5B', 'KDM5C', 'KDM6A', 'KDR', 'KEAP1', 'ATG13', 'KIF11', 'KLLN', 'KITLG', 'KIT', 'KLF17', 'KLF2', 'KLF4', 'KLK3', 'KPNA1', 'KPNA2', 'KPNA5', 'KPNA6', 'KPNA7', 'KRAS', 'KRT14', 'KRT5', 'KRT8', 'LASP1', 'LATS1', 'LATS2', 'LCK', 'LDHA', 'LEF1', 'LEP', 'LGALS3', 'LIG4', 'LOX', 'LRIG1', 'LRP1B', 'LRRK2', 'LYN', 'LYPD1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAN2C1', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K3', 'MAP2K4', 'MAP2K7', 'MAP3K1', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK4', 'MAPK6', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAP1', 'MAPT', 'MARCH2', 'MARCH3', 'MAST1', 'MAST2', 'MAST3', 'MAST4', 'MATK', 'MCL1', 'MCM2', 'MCM7', 'MCRS1', 'MDK', 'MDM2', 'MDM4', 'MECOM', 'MECP2', 'MED12', 'MEN1', 'MET', 'MGMT', 'MINPP1', 'MITF', 'MKI67', 'MKRN1', 'MLH1', 'MLH3', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT1', 'MLST8', 'MME', 'MMP2', 'MMP9', 'MOV10', 'MRAP', 'MRE11A', 'MSH2', 'MSH6', 'MTDH', 'MTMR2', 'MTOR', 'MTSS1', 'MUTYH', 'MVP', 'MYCN', 'MYC', 'MYLK', 'MYOCD', 'NANOG', 'NCKAP1', 'NCOA3', 'NCOR2', 'NDFIP1', 'NDFIP2', 'NDRG1', 'NDRG2', 'NEDD4L', 'NEDD4', 'NES', 'NF1', 'NF2', 'NFATC1', 'NFATC4', 'NFE2L2', 'NFKBIA', 'NGFR', 'NKX3-1', 'NLGN3', 'NLGN4X', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR1H4', 'NR3C2', 'NRAS', 'NRP2', 'NTRK1', 'NTRK2', 'NUMB', 'OCRL', 'OLIG2', 'OTUD3', 'PALB2', 'PARD3', 'PARD6A', 'PARD6B', 'PARD6G', 'PARK2', 'PARK7', 'PARP1', 'PAX8', 'PBK', 'PBRM1', 'PCGF2', 'PCSK9', 'PDCD1', 'PDCD4', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PDK1', 'PDK2', 'PDPK1', 'PDZK1', 'PECAM1', 'PGM3', 'PGR', 'PHF6', 'PHLPP1', 'PHLPP2', 'PI3', 'PI4K2A', 'PI4K2B', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIK3R5', 'PIKFYVE', 'PINK1', 'PIP4K2A', 'PIP4K2B', 'PIP4K2C', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PIP5KL1', 'PKM', 'PLCB1', 'PLCB2', 'PLCB3', 'PLCB4', 'PLCD1', 'PLCD3', 'PLCD4', 'PLCE1', 'PLCG1', 'PLCG2', 'PLCH1', 'PLCH2', 'PLCZ1', 'PLEKHA1', 'PLEK', 'PLK1', 'PLK2', 'PLK3', 'BPIFA1', 'PMAIP1', 'PML', 'PMPCA', 'PMS1', 'PMS2', 'POLE', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPM1D', 'PPP2R1A', 'PPP2R4', 'PPP2R5A', 'PPP2R5E', 'PPP3CA', 'PPP6C', 'PRDX1', 'PREX2', 'PRKAA1', 'PRKAA2', 'PRKCI', 'PRKCZ', 'PRKDC', 'PRMT5', 'PROM1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTER', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPMT1', 'PTPN11', 'PTPN12', 'PTPN13', 'PTPN1', 'PTPRC', 'PTPRD', 'PTS', 'PXN', 'RAB7A', 'RAC1', 'RAC2', 'RAD51C', 'RAD51D', 'RAD51', 'RAD52', 'RAF1', 'RASA1', 'RASSF1', 'RB1CC1', 'RB1', 'RBL1', 'RBL2', 'RBM38', 'RBFOX2', 'RCN1', 'RECK', 'RELA', 'REL', 'REM1', 'RETN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'DROSHA', 'RNF146', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KB1', 'RPS6KB2', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'RRM1', 'RSL1D1', 'RUNX3', 'RWDD3', 'SACM1L', 'SALL4', 'SCAI', 'SCGB1D4', 'SCRIB', 'SDHB', 'SDHC', 'SERPINA1', 'SERPINA4', 'SERPINB5', 'SESN1', 'SESN2', 'SETD2', 'SGK1', 'SGK2', 'SGK3', 'SHANK2', 'SHARPIN', 'SHC1', 'SHFM1', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT5', 'SIRT6', 'SIRT7', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC2A4', 'SLC34A2', 'SLC9A3R1', 'SLC9A3R2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNCA', 'SNX27', 'SOCS1', 'SOCS3', 'SOD2', 'SOS1', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPOP', 'SPRY1', 'SPRY2', 'SRBD1', 'SRC', 'SREBF1', 'SRF', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STMN1', 'STUB1', 'STX16', 'SUCLG2', 'SUMO1', 'SYK', 'SYNJ1', 'SYNJ2', 'TACSTD2', 'TBX1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TEP1', 'TERT', 'TET1', 'TGFB1', 'TGFBR1', 'TGFBR2', 'TGM2', 'THBS1', 'TIMP1', 'TIMP3', 'TJP1', 'TLR4', 'TMEM55A', 'TMEM55B', 'TMPRSS2', 'TNFRSF10B', 'TNFSF10', 'TNF', 'TNKS2', 'TNKS', 'TNPO2', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TPM1', 'TRAF6', 'TRIM27', 'TRIM29', 'TSC1', 'TSC2', 'TTN', 'TUT1', 'TWIST1', 'TWSG1', 'TXN', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2E1', 'UBE2I', 'UBE2L3', 'UBE3A', 'ULK1', 'ULK2', 'USP10', 'USP13', 'USP18', 'USP28', 'USP7', 'USP8', 'UTF1', 'UVRAG', 'VCL', 'VDR', 'VEGFA', 'VHL', 'WDR18', 'WDTC1', 'WEE1', 'WIPI1', 'WIPI2', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT9A', 'WNT9B', 'WT1', 'WWP1', 'WWP2', 'XIAP', 'XPO1', 'XPO5', 'YAP1', 'YES1', 'YWHAB', 'YWHAZ', 'YY1', 'ZEB1', 'ZEB2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 2.4173968487608084e-15 NRMSE: 3.779840276383095e-16 MAPE: 3.277758560859937e-12 Pearson Correlation: 0.11413054354390394 Spearman Correlation: 0.11100380450687738 Coefficient of Determination: -4.919051398776279 RMSE: 1.20834453879658 NRMSE: 0.39824155915779447 MAPE: 860.613940009091 Predictor: ElasticNet Pearson Correlation: 0.8369329238409207 Spearman Correlation: 0.802705388552244 Coefficient of Determination: 0.6624138250948004 RMSE: 0.36399503811300354 NRMSE: 0.05691424253193707 MAPE: 384.0559796896736 Pearson Correlation: 0.2435484609981248 Spearman Correlation: 0.2632231001853478 Coefficient of Determination: -0.2501826174410249 RMSE: 0.5553304098565921 NRMSE: 0.18302366681714852 MAPE: 303.69406900271736 Predictor: RandomForests Pearson Correlation: 0.5983317064201549 Spearman Correlation: 0.5566130776311595 Coefficient of Determination: 0.31039299635334594 RMSE: 0.5202402729896276 NRMSE: 0.08134473817365766 MAPE: 343.05542700563353 Pearson Correlation: 0.3129213352792975 Spearman Correlation: 0.32680873480407685 Coefficient of Determination: 0.0853305514619388 RMSE: 0.4750035053447232 NRMSE: 0.15654983367764919 MAPE: 188.1204497344643 Protein: BRCA2 Protein Interaction Partners Count: 361 x_train_column_count: 351 x_train columns: ['ABL1', 'ACHE', 'ADRB1', 'ADRB2', 'AKT1', 'ALK', 'APEX1', 'ARID1A', 'ARPC1A', 'AR', 'ATAD5', 'ATM', 'ATRIP', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'B3GALTL', 'BACH1', 'BARD1', 'BCCIP', 'BCHE', 'BDNF', 'BECN1', 'BIRC5', 'BLM', 'BMI1', 'BRCA1', 'BRCC3', 'BRE', 'BRIP1', 'SLX4', 'BUB1B', 'BUB1', 'BUB3', 'SFR1', 'RHNO1', 'RMI2', 'BABAM1', 'MMS22L', 'CASC1', 'CASC5', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCNE1', 'CDC25A', 'CDC25C', 'CDC45', 'CDC6', 'CDH1', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CENPE', 'CENPF', 'CEP55', 'CHEK1', 'CHEK2', 'CHRNA1', 'CLSPN', 'CNTROB', 'CREM', 'CSMD3', 'CTNNB1', 'CYP19A1', 'DMC1', 'DNA2', 'DSN1', 'DYNC1LI2', 'EGFR', 'EGF', 'ELAC2', 'EME1', 'EME2', 'ENAM', 'EPCAM', 'ERBB2', 'ERBB3', 'ERCC1', 'ERCC2', 'ERCC4', 'ERCC5', 'ERCC6', 'ERCC8', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM175A', 'FANCA', 'FANCB', 'FANCC', 'FANCD2', 'FANCE', 'FANCF', 'FANCG', 'FANCI', 'FANCL', 'FANCM', 'FBN1', 'FBXO18', 'FBXW7', 'FEN1', 'FGFR2', 'FHIT', 'FLNA', 'FOXM1', 'GAPDH', 'GEN1', 'SLX1B', 'H2AFX', 'HELQ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HMG20A', 'HMG20B', 'HMMR', 'HNRNPC', 'HOXB13', 'HRAS', 'HUS1', 'ITPKB', 'KAT2B', 'KAT5', 'KEAP1', 'SPIDR', 'KIF23', 'KIF4A', 'KIT', 'KLK3', 'KRAS', 'KRT5', 'LIG1', 'LIG3', 'LIG4', 'LIMD1', 'LSP1', 'MAD2L2', 'MAGED1', 'MAMSTR', 'MAP2K2', 'MAP3K1', 'MCM10', 'MCPH1', 'MDC1', 'MDM2', 'MDM4', 'MEN1', 'MGMT', 'MKI67', 'MLH1', 'MLH3', 'KMT2C', 'MND1', 'MORF4L1', 'MRE11A', 'MRPL36', 'MSH2', 'MSH3', 'MSH4', 'MSH5', 'MSH6', 'MTA2', 'FAN1', 'MUC1', 'MUS81', 'MUTYH', 'MYC', 'NBN', 'NCAPG', 'NEDD4', 'NF1', 'NHEJ1', 'NNT', 'NOTCH1', 'NSL1', 'NSMCE4A', 'OBFC1', 'OGG1', 'PALB2', 'PARG', 'PARP1', 'PARP2', 'PARP3', 'PAXIP1', 'PCNA', 'PDLIM7', 'PDS5A', 'PDS5B', 'PGR', 'PIK3CA', 'PLCB4', 'PLEC', 'PLEKHH1', 'PLK1', 'PMS1', 'PMS2', 'PNOC', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'POLN', 'POLQ', 'PRDM9', 'PRKDC', 'PRSS1', 'PSMC3IP', 'PSMD3', 'PSMD6', 'PTEN', 'RAD17', 'RAD18', 'RAD1', 'RAD21', 'RAD23B', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD52', 'RAD54B', 'RAD54L', 'RAD9A', 'RAD9B', 'RAG2', 'RASSF1', 'RBBP8', 'RBMX', 'RECQL4', 'RECQL5', 'RECQL', 'RET', 'REV1', 'REV3L', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RNF168', 'RNF8', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SKP2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCAL1', 'SMARCB1', 'SMC1A', 'SMC2', 'SMC3', 'SMC4', 'SMC5', 'SMC6', 'SMUG1', 'SNAI2', 'SP1', 'SPO11', 'STAT5A', 'STK11', 'STRA13', 'SUV39H1', 'SYCP3', 'TBCE', 'TDP1', 'TERT', 'TEX15', 'TMPRSS2', 'TNS1', 'TOP1', 'TOP2A', 'TOP3A', 'TOP3B', 'TOPBP1', 'TOX3', 'TP53BP1', 'TP53', 'TPX2', 'TRIP12', 'PRSS58', 'TTK', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2D1', 'UBE2E2', 'UBE2E3', 'UBE2N', 'UBE2T', 'UIMC1', 'USF1', 'USP11', 'USP15', 'USP1', 'USP21', 'USP4', 'UVRAG', 'VEGFA', 'VWF', 'WDR48', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WTIP', 'XPA', 'XPO1', 'XRCC1', 'XRCC2', 'XRCC3', 'XRCC4', 'XRCC5', 'XRCC6', 'ZFYVE26', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.845401047935339 Spearman Correlation: 0.8120135223720151 Coefficient of Determination: 0.7147029318501694 RMSE: 0.10555049364409864 NRMSE: 0.06827946492185492 MAPE: 270.5374396675488 Pearson Correlation: 0.020965348263200363 Spearman Correlation: 0.04804902942281085 Coefficient of Determination: -4.0071293858705195 RMSE: 0.4133736681390253 NRMSE: 0.41370463184450096 MAPE: 640.1565431607893 Predictor: ElasticNet Pearson Correlation: 0.5227163800020961 Spearman Correlation: 0.49567956769697824 Coefficient of Determination: 0.2224635205226897 RMSE: 0.17424968488124618 NRMSE: 0.11272022361743378 MAPE: 170.9102711313709 Pearson Correlation: 0.33429504241531327 Spearman Correlation: 0.317384056902071 Coefficient of Determination: 0.10004820226165057 RMSE: 0.1752499998031831 NRMSE: 0.17539031205282538 MAPE: 157.47461380031353 Predictor: RandomForests Pearson Correlation: 0.60386639891161 Spearman Correlation: 0.5287781457532937 Coefficient of Determination: 0.19635272742338494 RMSE: 0.1771513033962627 NRMSE: 0.11459724903695205 MAPE: 155.59914979554776 Pearson Correlation: 0.3217142094796893 Spearman Correlation: 0.32712945947914707 Coefficient of Determination: 0.07344564996461644 RMSE: 0.17782132885814864 NRMSE: 0.17796369981800306 MAPE: 126.72724445348126 Protein: CDKN2A Protein Interaction Partners Count: 612 x_train_column_count: 605 x_train columns: ['ABCC1', 'ABL1', 'ACAP1', 'ACAP2', 'ACP5', 'ACTA1', 'ACTB', 'ACTG1', 'ADAMTS9', 'ADAP1', 'AFP', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD12', 'ANXA5', 'AP3D1', 'AP3S1', 'AP3S2', 'APAF1', 'APBA1', 'APBA2', 'ARAP1', 'ARAP2', 'ARF1', 'ARF3', 'ARF4', 'ARF5', 'ARF6', 'ARFGAP1', 'ARFGAP3', 'ARFIP2', 'ARFRP1', 'ARID1A', 'ARID2', 'ARID5B', 'ARL10', 'ARL1', 'ARL2', 'ARL3', 'ARL4A', 'ARL5A', 'AR', 'ASAP1', 'ATM', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'AXIN1', 'BAP1', 'BCL2L11', 'BCL2L1', 'BCL6', 'BECN1', 'BIRC5', 'BMI1', 'BRAF', 'BRCA1', 'BRCA2', 'BUB1B', 'RGCC', 'C1QBP', 'RABL6', 'CACNA1G', 'CADM1', 'CAMK1D', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNL1', 'CD274', 'CD34', 'CD44', 'CDC123', 'CDC20', 'CDC25A', 'CDC25C', 'CDC42', 'CDC45', 'CDC5L', 'CDC6', 'CDC7', 'CDH13', 'CDH17', 'CDH1', 'CDH2', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5RAP3', 'CDK6', 'CDK7', 'CDKAL1', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDX2', 'CEACAM5', 'CEBPB', 'CEBPE', 'CHEK1', 'CHEK2', 'CHFR', 'CHKA', 'COMMD1', 'CRABP1', 'CREBBP', 'CSF1R', 'CSF1', 'CSF2', 'CTBP1', 'CTBP2', 'CTCF', 'CTLA4', 'CTNNB1', 'CTSK', 'CUL1', 'CUL3', 'CXCR4', 'CYCS', 'CYLD', 'CYTH1', 'CYTH2', 'CYTH3', 'DAB2IP', 'DAP', 'DAXX', 'DICER1', 'DIRAS3', 'DLEC1', 'DMTF1', 'DNAH3', 'DNMT1', 'DNMT3A', 'DNMT3B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EBF1', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EP300', 'EPCAM', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ETS1', 'ETV6', 'EWSR1', 'EZH1', 'EZH2', 'FAT1', 'FBXW7', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FKBP2', 'FLT3', 'FMN2', 'FN1', 'FOS', 'FOXA1', 'FOXM1', 'FOXN2', 'FOXO1', 'FOXO3', 'FTO', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GATA4', 'GATA5', 'GBF1', 'GDF15', 'GGA1', 'GGA2', 'GGA3', 'GIT1', 'GIT2', 'GLI1', 'GLTSCR2', 'GMNN', 'GNA11', 'GNAQ', 'GNAS', 'GNL3', 'GOLPH3', 'GP5', 'GSPT1', 'GSTP1', 'H2AFX', 'H2AFZ', 'H3F3A', 'H3F3B', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC9', 'HELLS', 'HGF', 'HHEX', 'HIC1', 'HIF1A', 'HIST1H2BA', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AA3', 'HIST2H2AC', 'HIST2H4A', 'HIST4H4', 'HLTF', 'HMGA2', 'HNF4A', 'HNRNPD', 'HOPX', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA4', 'HSPA9', 'HUWE1', 'ID1', 'IDH1', 'IDH2', 'IGF1R', 'IGF1', 'IGF2BP2', 'IGF2R', 'IGF2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING4', 'INS', 'IQSEC1', 'IRS1', 'ISOC2', 'ITGAM', 'JAK1', 'JAK2', 'JAK3', 'JAZF1', 'JUNB', 'JUN', 'KAT2B', 'KAT5', 'KCNJ11', 'KCNQ1', 'KDM1A', 'KDM2B', 'KDM6A', 'KDM6B', 'KDR', 'KEAP1', 'KIAA1549', 'KIT', 'KLF4', 'KRAS', 'KRT19', 'KRT20', 'KRT5', 'KRT7', 'LATS2', 'LOX', 'LRRK2', 'MACROD2', 'MAF', 'MAP2K1', 'MAP2K4', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MAX', 'MC1R', 'MCL1', 'MCM10', 'MCM2', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEN1', 'MEOX1', 'MEOX2', 'MET', 'MGMT', 'MITF', 'MKRN1', 'MLANA', 'MLH1', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT3', 'MME', 'MMP2', 'MMP7', 'MMP9', 'MOV10', 'MRAS', 'MSH2', 'MSH6', 'MTA1', 'MTAP', 'MTHFR', 'MTNR1B', 'MTOR', 'MUC1', 'MYBL2', 'MYCL', 'MYCN', 'MYC', 'MYOD1', 'KAT6A', 'NANOG', 'NCAM1', 'NCL', 'NCOR1', 'NES', 'NEUROG1', 'NF1', 'NF2', 'NFATC1', 'NFE2L2', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NPM1', 'NRAS', 'NSUN2', 'ORC4', 'ORC5', 'OSBP2', 'P2RY8', 'PA2G4', 'PALB2', 'PARP1', 'PAX3', 'PAX5', 'PAX8', 'PBRM1', 'PCGF2', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PEX19', 'PGR', 'PHLDB1', 'PI3', 'PIAS2', 'PIGF', 'PIK3CA', 'PIK3R1', 'PIP4K2A', 'PLEKHA3', 'PLEKHA8', 'PLEK', 'PLK1', 'PMAIP1', 'PML', 'PMS2', 'POTEF', 'POU5F1', 'PPARA', 'PPARG', 'PPM1D', 'PPP1R9B', 'PPP3CA', 'PRDM2', 'PRMT6', 'PROM1', 'PRSS1', 'PSMC3', 'PSMD10', 'PSME3', 'PTCH1', 'PTEN', 'PTER', 'PTF1A', 'PTGS2', 'PTPN11', 'PTPRC', 'PTPRD', 'PXN', 'RAB11A', 'RAB5A', 'RABEP1', 'RABGEF1', 'RAC2', 'RAD51', 'RAF1', 'RAP2B', 'RARB', 'RASSF1', 'RASSF2', 'RB1', 'RBL1', 'RBL2', 'RCC1', 'RELA', 'RELB', 'REL', 'RET', 'RHOA', 'DROSHA', 'RNF2', 'RNF43', 'ROS1', 'RPL11', 'RPRM', 'RPS27A', 'RPS6KB1', 'RRAS2', 'RRAS', 'RTEL1', 'RUNX2', 'RUNX3', 'SDHC', 'SENP1', 'SENP3', 'SERPINE1', 'SERTAD1', 'SETD2', 'SFN', 'SFRP1', 'SFRP2', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SIX2', 'SKP2', 'SLC30A8', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SNAI1', 'SNAI2', 'SNCA', 'SOCS1', 'SOX2', 'SP1', 'SPEN', 'SRC', 'STAT1', 'STAT3', 'STK11', 'STK25', 'STK33', 'STMN1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUV39H1', 'SUZ12', 'SYNE1', 'SYP', 'TBL1XR1', 'TBRG1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TERT', 'TET2', 'TFDP1', 'TFPI2', 'TGFBR2', 'THADA', 'THBS1', 'TIMP3', 'TMCO1', 'TMEM115', 'TNFRSF10B', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TRADD', 'TRIM28', 'TRIP12', 'PRSS58', 'TSC2', 'TSPAN8', 'TTF1', 'TWIST1', 'TWSG1', 'TYR', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2I', 'UBE3A', 'UCHL1', 'USP7', 'UTF1', 'VEGFA', 'VHL', 'WDTC1', 'WEE1', 'WFS1', 'WHSC1', 'WIF1', 'WRN', 'WT1', 'WWOX', 'XRCC1', 'YY1', 'ZBTB17', 'ZBTB7A', 'ZEB1', 'ZFP91', 'ZNF148', 'ZNF217', 'ZNF227', 'ZNF410', 'ZNF420', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 4.4247939155458436e-15 NRMSE: 1.0002925094485912e-15 MAPE: 3.010263510127274e-12 Pearson Correlation: 0.18184146750799118 Spearman Correlation: 0.11175982830943322 Coefficient of Determination: -7.5700150263531985 RMSE: 2.1864162337437247 NRMSE: 0.5904445675786456 MAPE: 1344.8063631282057 Predictor: ElasticNet Pearson Correlation: 0.8280627732813028 Spearman Correlation: 0.7970371734239098 Coefficient of Determination: 0.6595264180153961 RMSE: 0.3750247827056076 NRMSE: 0.08478010234104386 MAPE: 139.028048067234 Pearson Correlation: 0.6367530947915302 Spearman Correlation: 0.5468734757584627 Coefficient of Determination: 0.40504394508314334 RMSE: 0.5760822523668955 NRMSE: 0.155571766774749 MAPE: 440.7104354190826 Predictor: RandomForests Pearson Correlation: 0.6607511781830171 Spearman Correlation: 0.6039855415911017 Coefficient of Determination: 0.42435018378000744 RMSE: 0.4876378899475922 NRMSE: 0.1102380219164897 MAPE: 179.7477011975791 Pearson Correlation: 0.7092247029117462 Spearman Correlation: 0.5793828864710735 Coefficient of Determination: 0.4563914662849009 RMSE: 0.5506620972013854 NRMSE: 0.14870702057828392 MAPE: 286.0885966516016 Protein: TP53 Protein Interaction Partners Count: 1000 x_train_column_count: 991 x_train columns: ['ABCB1', 'ABCC1', 'ABL1', 'ACTB', 'ACTL6A', 'ADAM17', 'AFP', 'AGT', 'AICDA', 'AIFM2', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD2', 'ANXA1', 'ANXA2', 'ANXA5', 'APAF1', 'APBB1', 'APC', 'APEX1', 'APOBEC3B', 'APP', 'ARID1A', 'ARID3A', 'AR', 'ASF1A', 'ASXL1', 'ATF2', 'ATF3', 'ATG7', 'ATM', 'ATN1', 'ATRIP', 'ATRX', 'ATR', 'ATXN3', 'AURKA', 'AURKB', 'AXIN1', 'AXL', 'BACE1', 'BAG1', 'BAG2', 'BAIAP2L1', 'BAK1', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2A1', 'BCL2L11', 'BCL2L12', 'BCL2L14', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BID', 'BIRC3', 'BIRC5', 'BIRC6', 'BLM', 'BMF', 'BMI1', 'BMX', 'BNIP3L', 'BNIP3', 'BRCA1', 'BRCA2', 'BRCC3', 'BRD1', 'BRD4', 'BRD7', 'BRE', 'BRIP1', 'BRPF1', 'BRPF3', 'BTG2', 'BTK', 'BUB1B', 'BUB1', 'RHNO1', 'RGCC', 'RMI2', 'CNOT11', 'SETD9', 'CA9', 'CABIN1', 'CABLES1', 'CAPN1', 'CARM1', 'CASP10', 'CASP1', 'CASP2', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBX2', 'CBX4', 'CBX6', 'CBX8', 'CCDC106', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNG2', 'CCNH', 'CCNK', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CD24', 'CD274', 'CD34', 'CD40LG', 'CD40', 'CD44', 'CD82', 'CDC20', 'CDC25A', 'CDC25C', 'CDH17', 'CDH1', 'CDK12', 'CDK13', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CEACAM5', 'CEBPB', 'CENPJ', 'CFL1', 'CFLAR', 'CHD3', 'CHD4', 'CHD8', 'CHEK1', 'CHEK2', 'CHUK', 'CISH', 'CITED2', 'CLSPN', 'CLU', 'CNOT10', 'CNOT1', 'CNOT2', 'CNOT3', 'CNOT4', 'CNOT6L', 'CNOT6', 'CNOT7', 'CNOT8', 'COPS5', 'CREB1', 'CREBBP', 'CRYAB', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK1G1', 'CSNK1G2', 'CSNK1G3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTCF', 'CTGF', 'CTNNB1', 'CUL4A', 'CUL7', 'CUL9', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP1A1', 'DACH1', 'DAPK1', 'DAP', 'DAXX', 'DDB1', 'DDB2', 'DDIT4', 'DDX17', 'DDX3X', 'DDX5', 'DECR1', 'DGCR8', 'DHCR24', 'DHFR', 'DIABLO', 'DICER1', 'DKK1', 'DMTF1', 'DNA2', 'DNAJA3', 'DNAJB1', 'DNMT1', 'DNMT3A', 'DNTT', 'DPYD', 'DRAM1', 'DTL', 'DUSP1', 'DUSP2', 'DYRK1A', 'DYRK2', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EEF1A1', 'EEF1A2', 'EGFR', 'EGF', 'EGR1', 'EHMT1', 'EHMT2', 'EI24', 'EIF2AK2', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4EBP1', 'ELANE', 'ELAVL1', 'ELL3', 'ELL', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHA3', 'EPHB2', 'ERBB2', 'ERBB4', 'ERCC1', 'ERCC2', 'ERCC3', 'ERCC6', 'ESR1', 'ETS1', 'ETS2', 'EWSR1', 'EXO1', 'EZH2', 'F2', 'FADD', 'AMER1', 'FAM175B', 'FANCC', 'FANCD2', 'FASLG', 'FAS', 'FBL', 'FBXO11', 'FBXO4', 'FBXW7', 'FGF1', 'FGF2', 'FGFR3', 'FHIT', 'FHL2', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FSCN1', 'FUT4', 'FZR1', 'G3BP1', 'G6PD', 'GADD45A', 'GADD45B', 'GADD45G', 'GAPDH', 'GATAD2A', 'GATAD2B', 'GDF15', 'GFI1', 'GLS2', 'GLTSCR2', 'GNL3', 'GRAMD4', 'GRB10', 'GRB14', 'GSK3B', 'GSTP1', 'GTF2H1', 'GTSE1', 'H1F0', 'H2AFX', 'HAMP', 'HCK', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC5', 'HDAC7', 'HDAC8', 'HDAC9', 'HERC5', 'HIC1', 'HIF1A', 'HIPK1', 'HIPK2', 'HIPK3', 'HIPK4', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HK2', 'HMGA1', 'HMGA2', 'HMGB1', 'HMGB2', 'HMMR', 'HMOX1', 'HNF4A', 'HNRNPK', 'HNRNPL', 'HOXA5', 'HPGDS', 'HRAS', 'HSF1', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA1A', 'HSPA1B', 'HSPA1L', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'HSPB1', 'HSPB2', 'HTT', 'HUS1', 'HUWE1', 'ICAM1', 'ID2', 'ID4', 'IDH1', 'IDH2', 'IFI16', 'IFNAR1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IGFBP7', 'IKBKB', 'IL17A', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING2', 'ING3', 'ING4', 'ING5', 'INSIG1', 'INS', 'IRF1', 'ISG15', 'ITPKB', 'JAG1', 'JAK2', 'JMY', 'JUN', 'KAT2A', 'KAT2B', 'KAT5', 'KDM1A', 'KDM6A', 'KDM6B', 'KDR', 'KHDRBS1', 'CCAR2', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KPNA2', 'KRAS', 'KRT14', 'KRT17', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'L3MBTL1', 'LAMA4', 'LEP', 'LGALS7B', 'LGALS7', 'LIF', 'LIG4', 'LIN28A', 'PIDD1', 'LRRK2', 'LYN', 'MAF1', 'MAF', 'MAGEA2', 'MAP1LC3B', 'MAP2K1', 'MAP2K3', 'MAP2K7', 'MAP3K1', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MBD3', 'MCL1', 'MCM7', 'MDC1', 'MDH1', 'MDM2', 'MDM4', 'MEAF6', 'MECOM', 'MELK', 'MET', 'MGMT', 'MIF', 'MKI67', 'MKRN1', 'MLH1', 'KMT2D', 'KMT2C', 'MMP13', 'MMP1', 'MMP2', 'MMP9', 'MOV10', 'MRE11A', 'MSH2', 'MSH6', 'MSX1', 'MT1A', 'MT2A', 'MTA1', 'MTA2', 'MTA3', 'MTOR', 'MUC1', 'MUTYH', 'MYBBP1A', 'MYB', 'MYCN', 'MYC', 'MYOCD', 'KAT8', 'KAT6A', 'NANOG', 'NBN', 'NCL', 'NCOA3', 'NCOR1', 'NCOR2', 'NDN', 'NDRG1', 'NEDD8', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFE2L2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NFKBIB', 'NFYA', 'NFYB', 'NFYC', 'NGFR', 'NKX2-1', 'NLK', 'NLRC4', 'NME1', 'NOC2L', 'NOS3', 'NOTCH1', 'NOTCH3', 'NOTCH4', 'NOX4', 'NPM1', 'NQO1', 'NR1I2', 'NR2E1', 'NR3C1', 'NR4A1', 'NR4A2', 'NRAS', 'NUAK1', 'NUMB', 'NUPR1', 'OGG1', 'OLIG2', 'OPN1SW', 'OSGIN1', 'OTUB1', 'OTUB2', 'OTUD5', 'PADI4', 'PALB2', 'PARK2', 'PARK7', 'PARP1', 'PATZ1', 'PAX2', 'PAX3', 'PAX8', 'PBK', 'PBRM1', 'PCBP4', 'PCNA', 'PDCD4', 'PDCD5', 'PDGFRA', 'PDGFRB', 'PDLIM7', 'PER2', 'PERP', 'PGR', 'PHB', 'PHC1', 'PHC2', 'PHC3', 'PHF20', 'PHGDH', 'PI3', 'PIAS1', 'PIAS2', 'PIAS4', 'PIK3CA', 'PIN1', 'PKM', 'PLAGL1', 'PLAU', 'PLK1', 'PLK2', 'PLK3', 'PLK4', 'PMAIP1', 'PML', 'PMS2', 'POLI', 'POLK', 'POU4F1', 'POU4F2', 'POU5F1', 'PPARGC1A', 'PPARG', 'PPIF', 'PPM1D', 'PPP1R13B', 'PPP1R13L', 'PPP1R15A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R4', 'PPP2R5C', 'PRDM1', 'PRDM2', 'PRDX1', 'PRELID1', 'PRIMA1', 'PRKAA1', 'PRKAA2', 'PRKAB1', 'PRKAB2', 'PRKAG1', 'PRKAG2', 'PRKAG3', 'PRKCA', 'PRKCD', 'PRKCZ', 'PRKD1', 'PRKDC', 'PRKG1', 'PRMT1', 'PRMT5', 'PROM1', 'PSEN1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTBP1', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2', 'PTTG1', 'RABGGTA', 'RABGGTB', 'RAD17', 'RAD1', 'RAD50', 'RAD51', 'RAD9A', 'RAD9B', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP4', 'RBBP6', 'RBBP7', 'RBBP8', 'RBL1', 'RBL2', 'RBM38', 'RBPJ', 'RCHY1', 'RCOR1', 'RECQL4', 'RELA', 'REM1', 'REST', 'RET', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RFFL', 'RFWD2', 'RING1', 'RMI1', 'DROSHA', 'RNF20', 'RNF2', 'RNF34', 'RNF43', 'ROCK1', 'RPA1', 'RPA2', 'RPA3', 'RPL11', 'RPL22', 'RPL26', 'RPL5', 'RPRM', 'RPS14', 'RPS19', 'RPS27A', 'RPS27L', 'RPS3', 'RPS6KB1', 'RQCD1', 'RRAD', 'RRM2B', 'RRM2', 'RUNX2', 'RUNX3', 'S100A2', 'S100A4', 'S100A6', 'S100B', 'SALL4', 'SCO2', 'SDHC', 'SENP1', 'SENP3', 'SERPINB5', 'SERPINE1', 'SESN1', 'SESN2', 'SESN3', 'SETD2', 'SETD7', 'SETD8', 'SETDB1', 'SFN', 'SRSF1', 'SGK1', 'SHFM1', 'SHH', 'SHISA5', 'SIK1', 'SIN3A', 'SIN3B', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SKP2', 'SLC2A14', 'SLC2A1', 'SLC2A2', 'SLC2A3', 'SLC6A6', 'SLMO1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMG1', 'SMG7', 'SMYD2', 'SNAI1', 'SNAI2', 'SOCS1', 'SOCS3', 'SOD2', 'SORT1', 'SOX2', 'SOX4', 'SP100', 'SP1', 'SP3', 'SP7', 'SPATA18', 'SPP1', 'SQSTM1', 'SRC', 'SREBF1', 'SREBF2', 'SSRP1', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STEAP3', 'STK11', 'STMN1', 'STUB1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUMO4', 'SUPT16H', 'SUV39H1', 'SUZ12', 'SYK', 'SYP', 'TADA3', 'TAF10', 'TAF11', 'TAF12', 'TAF13', 'TAF15', 'TAF1L', 'TAF1', 'TAF2', 'TAF3', 'TAF4B', 'TAF4', 'TAF5', 'TAF6', 'TAF7L', 'TAF7', 'TAF9B', 'TBPL1', 'TBPL2', 'TBP', 'TCHP', 'TCP1', 'TDG', 'TERT', 'TET2', 'TFAM', 'TFAP2A', 'TFAP2C', 'TFDP1', 'TFF1', 'TGFB1', 'TGM2', 'THBS1', 'TIMP3', 'TLR3', 'TLR9', 'TMEM219', 'TNFAIP3', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF10C', 'TNFRSF10D', 'TNF', 'TNK2', 'TNKS1BP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOE1', 'TOP1', 'TOP2A', 'TOP3A', 'TOPBP1', 'TOPORS', 'TP53AIP1', 'TP53BP1', 'TP53BP2', 'TP53I3', 'TP53INP1', 'TP53RK', 'TP63', 'TP73', 'TPT1', 'TPX2', 'TRAF6', 'TRIAP1', 'TRIM24', 'TRIM28', 'TRIM29', 'TRIM32', 'TRIM59', 'TRIM8', 'TRRAP', 'TSC2', 'TTC5', 'TTK', 'TWIST1', 'TWIST2', 'TXN', 'TYMS', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2D1', 'UBE2E1', 'UBE2I', 'UBE2K', 'UBE2N', 'UBE2Q1', 'UBE2S', 'UBE3A', 'UBN1', 'UCHL1', 'UHRF1', 'USF1', 'USP10', 'USP15', 'USP24', 'USP3', 'USP42', 'USP7', 'UTP14A', 'VEGFA', 'VHL', 'VPRBP', 'VRK1', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WWOX', 'XAF1', 'XIAP', 'XPA', 'XPO1', 'XRCC1', 'XRCC5', 'XRCC6', 'YBX1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'YY1', 'YY2', 'ZBTB33', 'ZBTB7A', 'ZEB1', 'ZEB2', 'ZKSCAN4', 'ZNF148', 'ZNF274', 'ZNF385A', 'ZNF420', 'ZNF668', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.868276439740994e-15 NRMSE: 4.489969814325869e-16 MAPE: 4.7964913101423146e-12 Pearson Correlation: 0.30320631377237034 Spearman Correlation: 0.2967271485708711 Coefficient of Determination: -1.0979321509995033 RMSE: 0.6092615867779047 NRMSE: 0.21908791642198736 MAPE: 1072.3352377941985 Predictor: ElasticNet Pearson Correlation: 0.8288246430646417 Spearman Correlation: 0.7522267239576774 Coefficient of Determination: 0.6517075721872605 RMSE: 0.26723737951415844 NRMSE: 0.06422431615336661 MAPE: 473.69277306287125 Pearson Correlation: 0.5241426756124972 Spearman Correlation: 0.46420349234221053 Coefficient of Determination: 0.2626996665702944 RMSE: 0.3611854884323477 NRMSE: 0.12988078982787865 MAPE: 478.64731528003676 Predictor: RandomForests Pearson Correlation: 0.6578300600149463 Spearman Correlation: 0.5691549846269923 Coefficient of Determination: 0.37486668057814176 RMSE: 0.3580234818259469 NRMSE: 0.08604265364718744 MAPE: 564.486580249894 Pearson Correlation: 0.49991780325241103 Spearman Correlation: 0.5225089443287664 Coefficient of Determination: 0.24724954793540155 RMSE: 0.36495018692417036 NRMSE: 0.13123455964765737 MAPE: 355.9936133058641 Protein: CTNNB1 Protein Interaction Partners Count: 992 x_train_column_count: 984 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACAN', 'ACP1', 'ACTA1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTN4', 'ACVR1B', 'ACVR1', 'ADAM10', 'ADCY7', 'ADIPOQ', 'AES', 'AFP', 'AHI1', 'AHR', 'AHSA1', 'AJAP1', 'AK9', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'ALPL', 'AMHR2', 'AMH', 'ANXA5', 'AP1M1', 'APC2', 'APCS', 'APC', 'APH1A', 'APH1B', 'AQP1', 'ARHGAP10', 'ARHGAP21', 'ARHGAP32', 'ARHGEF4', 'ARID1A', 'ARID2', 'ARMC7', 'ARMC8', 'ARVCF', 'ARX', 'AR', 'ASCL1', 'ASF1A', 'ASH2L', 'ASIP', 'ATF4', 'ATM', 'AURKA', 'AXIN1', 'AXIN2', 'BAG3', 'BCAR1', 'BCL2L1', 'BCL3', 'BCL6', 'BCL9L', 'BCL9', 'BDNF', 'BGLAP', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BMPR1B', 'BNIP2', 'BRAF', 'BRCA1', 'BRCA2', 'BRMS1L', 'BTRC', 'HILPDA', 'AK8', 'CA2', 'CA9', 'CABLES1', 'CACYBP', 'CALM1', 'CALM3', 'CARM1', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBLL1', 'CBL', 'CBY1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CD24', 'CD34', 'CD40', 'CD44', 'CDC27', 'CDC42', 'CDC73', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH16', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH26', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDHR5', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK8', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDON', 'CDX1', 'CDX2', 'CEBPA', 'CHD8', 'CHRD', 'CHUK', 'CITED1', 'CKAP5', 'CLCA1', 'CLDN3', 'CLDN5', 'COL1A1', 'COPS3', 'COPS5', 'COPS6', 'CREB1', 'CREBBP', 'CRKL', 'CRK', 'CRP', 'CRYAB', 'CSNK1A1L', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK2A3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNAL1', 'CTNNBIP1', 'CTNND1', 'CTNND2', 'CTTN', 'CUL1', 'CUL4A', 'CUL4B', 'CXCR4', 'CXXC4', 'DAB2', 'DACT1', 'DACT2', 'DACT3', 'DCT', 'DCX', 'DDB1', 'DDX39A', 'DDX3X', 'DDX5', 'DHODH', 'DHX9', 'DKK1', 'DKK2', 'DKK3', 'DKK4', 'DLG1', 'DLG2', 'DLG4', 'DLG5', 'DLGAP1', 'DLL4', 'DLX1', 'DNM2', 'DNMT1', 'DPYD', 'DSC1', 'DSC2', 'DSC3', 'DSG1', 'DSG2', 'DSG3', 'DSG4', 'DSP', 'DUSP6', 'DVL1', 'DVL2', 'DVL3', 'E2F3', 'ECM1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'ELAVL1', 'EMD', 'ENAH', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHB2', 'EPHB3', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EXOC3', 'EXOC4', 'EYA4', 'EZH2', 'EZR', 'F2RL2', 'FAF1', 'AMER1', 'FANCA', 'FASLG', 'FAS', 'FAT1', 'FAT4', 'FBXW11', 'FBXW7', 'FERMT2', 'FER', 'FGF10', 'FGF13', 'FGF2', 'FGF3', 'FGF4', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FLT3', 'FMN1', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC2', 'FOXG1', 'FOXL1', 'FOXL2', 'FOXM1', 'FOXN3', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FRAT1', 'FRAT2', 'FRZB', 'FSCN1', 'FSTL1', 'FSTL3', 'FURIN', 'FUS', 'FXR1', 'FYN', 'FZD10', 'FZD1', 'FZD2', 'FZD3', 'FZD4', 'FZD5', 'FZD6', 'FZD7', 'FZD8', 'FZD9', 'GAPDH', 'GATA2', 'GATA4', 'GCG', 'GDF2', 'GDNF', 'GFRA1', 'GJA1', 'GLI1', 'GLI2', 'GLI3', 'GLIS2', 'GLUL', 'GNA11', 'GNA12', 'GNA13', 'GNAQ', 'GNAS', 'GPC3', 'GRIA2', 'GRIP1', 'GSK3A', 'GSK3B', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HAS2', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC7', 'HERC5', 'HES7', 'HGF', 'HGS', 'HHEX', 'HIC1', 'HIF1A', 'HINT1', 'HIPK2', 'HIST1H1C', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HMGB1', 'HNF1A', 'HNF4A', 'HNRNPA1', 'HNRNPA2B1', 'HNRNPK', 'HNRNPM', 'HOXA10', 'HOXB4', 'HPGD', 'HRAS', 'HSP90AB1', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPD1', 'HTRA1', 'HTT', 'HUWE1', 'IBSP', 'IDH1', 'IDH2', 'IFNB1', 'IFRD1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP4', 'IHH', 'IKBKB', 'IL6', 'CXCL8', 'ILK', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IRF3', 'ISG15', 'ISL1', 'ITGAE', 'ITGB1', 'ITGB7', 'ITK', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'AJUBA', 'JUN', 'JUP', 'KANK1', 'KAT2A', 'KAT2B', 'KAT5', 'KCNN1', 'KCTD1', 'KDM1A', 'KDR', 'KIF18B', 'KIF3A', 'KIF5B', 'KIFC3', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KRAS', 'KREMEN1', 'KRIT1', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LATS2', 'LDB1', 'LDHB', 'LDLR', 'LEF1', 'LEO1', 'LGR4', 'LGR5', 'LGR6', 'LHCGR', 'LHX8', 'LIF', 'LIMA1', 'LMNA', 'LMNB1', 'LOX', 'LRP4', 'LRP5L', 'LRP5', 'LRP6', 'LRRFIP1', 'LRRK2', 'LZTFL1', 'MACF1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8IP1', 'MAPK8', 'MAPK9', 'MDFIC', 'MDFI', 'MDK', 'MDM2', 'MED12', 'MED1', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'KMT2D', 'MLLT10', 'MLLT11', 'MLLT4', 'MLLT6', 'KMT2A', 'MME', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP25', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MRAP', 'MSH2', 'MSH6', 'MSN', 'MSX1', 'MSX2', 'MTDH', 'MTOR', 'MUC13', 'MUC1', 'MUTYH', 'MYCN', 'MYC', 'MYF5', 'MYO1D', 'MYO6', 'MYO7A', 'MYOD1', 'MYOG', 'NANOG', 'NCAM1', 'NCCRP1', 'NCOA2', 'NCSTN', 'NDP', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEURL2', 'NF1', 'NF2', 'NFAT5', 'NFKB1', 'NIT1', 'NKD1', 'NKX2-5', 'NLK', 'NME1', 'NOG', 'NONO', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR0B1', 'NR4A1', 'NR4A2', 'NR5A1', 'NR5A2', 'NRAS', 'NRIP1', 'NTRK1', 'NTRK2', 'NTRK3', 'NUDT5', 'NUMB', 'NUP153', 'NUTF2', 'OTX2', 'PAK1', 'PAK2', 'PAK3', 'PANK4', 'PARD3', 'PARD6A', 'PARK2', 'PARP1', 'PAX3', 'PAX6', 'PAX7', 'PAX8', 'PDGFRA', 'PDGFRB', 'PECAM1', 'PGK1', 'PGR', 'PHB', 'JADE1', 'PI3', 'PICK1', 'PIK3CA', 'PIK3R1', 'PIK3R2', 'PIN1', 'PIP5K1A', 'PIP5K1C', 'PITX2', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAG1', 'PLEKHA7', 'PLK1', 'PML', 'PMS2', 'POLE', 'PORCN', 'POTEF', 'POU5F1', 'PPARD', 'PPARG', 'PPM1A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R2B', 'PPP2R5A', 'PPP2R5B', 'PPP2R5C', 'PPP2R5D', 'PPP2R5E', 'PRKACA', 'PRKACB', 'PRKACG', 'PRKAR1A', 'PRKCA', 'PRKCG', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRL', 'PRMT1', 'PROC', 'PROM1', 'PROP1', 'PSEN1', 'PSEN2', 'PSENEN', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTEN', 'PTGES3', 'PTGS2', 'PTH1R', 'PTH', 'PTK2', 'PTK7', 'PTMA', 'PTN', 'PTPN11', 'PTPN13', 'PTPN1', 'PTPN6', 'PTPRB', 'PTPRC', 'PTPRF', 'PTPRG', 'PTPRJ', 'PTPRK', 'PTPRM', 'PTPRU', 'PTPRZ1', 'PVRL1', 'PVRL2', 'PXN', 'PYGO1', 'PYGO2', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RALGDS', 'RANBP3', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RAPGEF2', 'RAPGEF6', 'RAPSN', 'RARA', 'RARB', 'RARG', 'RARS', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP5', 'RBMX', 'RBPJ', 'RBX1', 'RELA', 'REM1', 'RET', 'RHOA', 'RIPK2', 'RNF220', 'RNF43', 'ROBO1', 'ROCK1', 'ROCK2', 'ROR2', 'RPRD1A', 'RPS27A', 'RPSA', 'RSPO1', 'RSPO2', 'RSPO3', 'RSPO4', 'RUNX2', 'RUNX3', 'RUVBL1', 'RUVBL2', 'RXRA', 'RYK', 'S100A4', 'S100A6', 'SALL1', 'SALL4', 'SATB1', 'SCRIB', 'SDHC', 'SERPINE1', 'SETD2', 'SETD7', 'SFN', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHFM1', 'SHH', 'SIAH1', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT6', 'SKP1', 'SLC6A3', 'SLC9A3R1', 'SLCO1B3', 'SLCO2A1', 'SLIT1', 'SLK', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD5', 'SMAD7', 'SMAD9', 'SMARCA2', 'SMARCA4', 'SMARCA5', 'SMARCB1', 'SMO', 'SMURF1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNX1', 'SOST', 'SOX10', 'SOX13', 'SOX17', 'SOX1', 'SOX2', 'SOX3', 'SOX4', 'SOX6', 'SOX7', 'SOX8', 'SOX9', 'SP1', 'SP7', 'SPAG9', 'SPATA13', 'SPEN', 'SPN', 'SPP1', 'SRC', 'STAT3', 'STK11', 'STRAP', 'STX4', 'SUFU', 'SUV39H1', 'SYP', 'TADA3', 'TAX1BP3', 'TAZ', 'TBL1XR1', 'TBL1X', 'TBX5', 'TBX6', 'TCF12', 'TCF3', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TFAP2A', 'TFCP2', 'TFF1', 'TFF2', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBR1', 'TGFBR2', 'TGM2', 'TJP1', 'TJP2', 'TLE1', 'TLE2', 'TLE3', 'TLE4', 'TNFRSF11B', 'TNFSF11', 'TNF', 'TNIK', 'TNKS2', 'TNKS', 'TNS1', 'TOB1', 'TOP2A', 'TP53', 'TRAF4', 'TRIM33', 'TRIM37', 'TRIP10', 'TRRAP', 'TSC2', 'TUBA1A', 'TWIST1', 'TYMS', 'T', 'UBA52', 'UBB', 'UBC', 'UBE2B', 'UBE2R2', 'UBE3A', 'UBR5', 'UCHL1', 'UMPS', 'UPRT', 'USP4', 'USP7', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VAV2', 'VAV3', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VHL', 'VIM', 'WDR64', 'WDTC1', 'WHSC1', 'WIF1', 'WISP1', 'WLS', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'WWTR1', 'XPO1', 'YAP1', 'YARS', 'YEATS4', 'YES1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'ZAP70', 'ZAR1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZIC3', 'ZNRF3', 'ZYX', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 3.739280388249011e-15 NRMSE: 7.536288748310077e-16 MAPE: 4.830855527380663e-12 Pearson Correlation: 0.24354476794010854 Spearman Correlation: 0.23229441030143402 Coefficient of Determination: -1.8335217834275377 RMSE: 1.2640923158688082 NRMSE: 0.313623856465243 MAPE: 949.6806191493512 Predictor: ElasticNet Pearson Correlation: 0.8846656734469865 Spearman Correlation: 0.8667778645887971 Coefficient of Determination: 0.7539533267807912 RMSE: 0.3656914374171425 NRMSE: 0.07370285132457474 MAPE: 352.16269156647127 Pearson Correlation: 0.4788997784206707 Spearman Correlation: 0.4628719149351283 Coefficient of Determination: 0.1747338105198648 RMSE: 0.6822012956134189 NRMSE: 0.16925551918161538 MAPE: 288.78081459485 Predictor: RandomForests Pearson Correlation: 0.6841986264785491 Spearman Correlation: 0.6820702465624745 Coefficient of Determination: 0.45392154713139776 RMSE: 0.544795564573407 NRMSE: 0.1098001823111851 MAPE: 366.845194298559 Pearson Correlation: 0.5488929367708912 Spearman Correlation: 0.48712320749195204 Coefficient of Determination: 0.29198761781243854 RMSE: 0.6318819358306932 NRMSE: 0.156771184397036 MAPE: 224.60700344906942 Protein: CCNE1 Protein Interaction Partners Count: 350 x_train_column_count: 347 x_train columns: ['ABL1', 'AKT1', 'AKT2', 'AKT3', 'ALDH18A1', 'ANAPC10', 'ANAPC13', 'ANAPC1', 'ANAPC2', 'ANAPC4', 'ANAPC5', 'ANAPC7', 'ANXA5', 'ARID1A', 'AR', 'ATM', 'AURKA', 'AURKB', 'BARD1', 'BCL2L1', 'BIRC5', 'BRCA1', 'BRCA2', 'BTG2', 'BTRC', 'BUB1B', 'BUB1', 'BUB3', 'RGCC', 'MLIP', 'CABLES1', 'CALM1', 'CAPRIN1', 'CASP3', 'CASP9', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNF', 'CCNG1', 'CCNH', 'CCNK', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CDC16', 'CDC20', 'CDC23', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC26', 'CDC27', 'CDC45', 'CDC6', 'CDC7', 'CDCA2', 'CDCA5', 'CDCA8', 'CDH1', 'CDK12', 'CDK13', 'CDK14', 'CDK15', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CENPA', 'CENPE', 'CHAF1A', 'CHD1L', 'CHEK1', 'CHEK2', 'CINP', 'CKS1B', 'CKS2', 'COPS5', 'CREBBP', 'CSK', 'CTNNB1', 'CUL1', 'CUL3', 'CUL4B', 'DBF4B', 'DBF4', 'DGCR8', 'DICER1', 'DTL', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'EBNA1BP2', 'ECT2', 'EGFR', 'EGF', 'ELAVL1', 'ELSPBP1', 'EP400', 'ERBB2', 'ERBB3', 'ERBB4', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM58A', 'FAM83H', 'FBXO5', 'FBXW7', 'FEN1', 'FGFR1', 'FGFR2', 'FGFR3', 'FOXM1', 'FZR1', 'GAPDH', 'GLI1', 'GMNN', 'GSK3B', 'H1F0', 'HDAC1', 'HEATR3', 'HERC5', 'HIST1H1A', 'HIST1H1B', 'HIST1H4A', 'HRAS', 'IFNAR1', 'IGF1R', 'IGF1', 'ITPKB', 'JUN', 'KIF11', 'KIF20A', 'KIF23', 'KIF2C', 'KPNA2', 'KRAS', 'LATS2', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'GMNC', 'MAD2L1', 'MAPK3', 'MATK', 'MAX', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDM2', 'MEGF11', 'MELK', 'MKI67', 'KMT2D', 'KMT2B', 'MNAT1', 'MRE11A', 'MTOR', 'MYBL2', 'MYC', 'NBN', 'NF1', 'NFYB', 'NMI', 'NOTCH1', 'NOTCH3', 'NPAT', 'NRAS', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PARK2', 'PARP1', 'PCBP4', 'PCNA', 'PIK3CA', 'PIK3R1', 'PKMYT1', 'PLK1', 'PLK4', 'POLA1', 'POLD1', 'PPP1R1C', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R4', 'PRC1', 'PRKAR1A', 'PRKAR2A', 'PRMT5', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB10', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSMF1', 'PTEN', 'PTGDR', 'PTK6', 'PTTG1', 'RAD51', 'RAD54L', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RBX1', 'REL', 'REM1', 'RHOA', 'RHOBTB3', 'RINT1', 'RNASE1', 'RPRD1A', 'RPS27A', 'RRM1', 'RRM2', 'RRN3', 'RSF1', 'SHFM1', 'SKP1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'ST8SIA1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STK3', 'STK4', 'TARBP1', 'TCP1', 'TERF1', 'TERT', 'TFDP1', 'TK1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TPX2', 'TTK', 'TUBG1', 'TYMS', 'UBA52', 'UBB', 'UBC', 'UBE2C', 'UBE2QL1', 'UBE2S', 'UHRF2', 'WEE1', 'WEE2', 'XIAP', 'YAP1', 'ZNF217', 'ZNF33A', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.9600859906029507 Spearman Correlation: 0.8662267544166397 Coefficient of Determination: 0.9217651093520491 RMSE: 0.13528524503270575 NRMSE: 0.032648416881701316 MAPE: 30.40559507270768 Pearson Correlation: 0.42559319189843353 Spearman Correlation: 0.324212271973466 Coefficient of Determination: -1.0744584893827307 RMSE: 0.7734976956786644 NRMSE: 0.27551120059792145 MAPE: 96.35319060126297 Predictor: ElasticNet Pearson Correlation: 0.8785038349918233 Spearman Correlation: 0.7339374522815456 Coefficient of Determination: 0.7640898386697024 RMSE: 0.23492190637575952 NRMSE: 0.056693753499471373 MAPE: 58.78422811846398 Pearson Correlation: 0.8435777759471468 Spearman Correlation: 0.6218954248366013 Coefficient of Determination: 0.6992864386682187 RMSE: 0.294498547267107 NRMSE: 0.10489707827857774 MAPE: 45.0229875819649 Predictor: RandomForests Pearson Correlation: 0.8596874273082401 Spearman Correlation: 0.7210960464713698 Coefficient of Determination: 0.7320514696254783 RMSE: 0.2503663064140619 NRMSE: 0.060420953836923974 MAPE: 54.40166636566519 Pearson Correlation: 0.845046857639206 Spearman Correlation: 0.7078185738575904 Coefficient of Determination: 0.7100918169730611 RMSE: 0.28915911496185553 NRMSE: 0.10299523239959235 MAPE: 44.09579052171135 Protein: CCND1 Protein Interaction Partners Count: 857 x_train_column_count: 849 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTL6B', 'AFP', 'AHR', 'AKAP12', 'AKAP8', 'AKR1B10', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDOA', 'ALK', 'ANO1', 'ANXA5', 'APAF1', 'APC', 'APEX1', 'AREG', 'ARHGEF2', 'ARID1A', 'ARID1B', 'ARID2', 'ARID4A', 'AR', 'ASIP', 'ATF2', 'ATF3', 'ATF4', 'ATM', 'ATXN1', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'B2M', 'BANP', 'BARX2', 'BAX', 'BCAR1', 'BCAR3', 'BCCIP', 'BCL2A1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL3', 'BCL6', 'BCL9', 'BECN1', 'BGLAP', 'BHLHE40', 'BIRC2', 'BIRC3', 'BIRC5', 'BMI1', 'BMP4', 'BMP6', 'BRAF', 'BRCA1', 'BRCA2', 'BRD2', 'BRD4', 'BTC', 'BTG2', 'BTRC', 'RGCC', 'COPRS', 'CA9', 'CARD11', 'CARM1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBFB', 'CCDC62', 'CCL2', 'CCL5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNC', 'CCND2', 'CCND3', 'CCNDBP1', 'CCNE1', 'CCNE2', 'CCNG2', 'CCNH', 'CCNK', 'CCNL1', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CD19', 'CD22', 'CD24', 'CD34', 'CD38', 'CD44', 'CD5', 'CD79A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC6', 'CDC73', 'CDCA7L', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK12', 'CDK13', 'CDK14', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK20', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CDX2', 'CENPE', 'CEP57', 'CFLAR', 'CHEK1', 'CHEK2', 'CHKA', 'CHUK', 'CKS1B', 'CKS2', 'CLCN3', 'COL1A1', 'CR2', 'CREB1', 'CREBBP', 'CRKL', 'CRYAB', 'CSF2', 'CTBP1', 'CTGF', 'CTNNB1', 'CTNND1', 'CTTN', 'CUL1', 'CUL3', 'CUL7', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'CYR61', 'DACH1', 'DAXX', 'DDIT3', 'DDX53', 'DECR1', 'DHFR', 'DICER1', 'DKK1', 'DKK3', 'DLL1', 'DMTF1', 'DND1', 'DNMT1', 'DNMT3A', 'DNTT', 'DVL1', 'DVL2', 'DYRK1A', 'DYRK1B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EDN1', 'EEF1A1', 'EGFR', 'EGF', 'EGLN2', 'EGR1', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF3I', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4E', 'EIF4G1', 'ELAVL1', 'ELSPBP1', 'EP300', 'EPCAM', 'EPHA2', 'EPHA7', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EWSR1', 'EYA1', 'EZH2', 'FABP4', 'FADD', 'FAM58A', 'FAM83H', 'FASLG', 'FAT1', 'FBXO31', 'FBXO4', 'FBXW7', 'FBXW8', 'FGF13', 'FGF19', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FHL2', 'FIGF', 'FLCN', 'FLNA', 'FLT1', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXC1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FRZB', 'FSTL3', 'FZD1', 'FZD2', 'FZD7', 'FZD9', 'FZR1', 'GADD45A', 'GAL', 'GAPDH', 'GAST', 'GATA3', 'GATA4', 'GDF15', 'GDF2', 'GGNBP2', 'GGT1', 'GIT1', 'GJA1', 'GJB1', 'GLI1', 'GLI2', 'GLI3', 'GLTSCR2', 'GNB2L1', 'GPER1', 'GRB2', 'GREB1', 'GRM4', 'GRP', 'GSK3B', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HBEGF', 'HBZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC4', 'HEXIM1', 'HEY1', 'HGF', 'HIF1A', 'HIST1H2AA', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AH', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AC', 'HIST2H2BE', 'HIST2H4A', 'HIST4H4', 'HMGA2', 'HMOX1', 'HNF1A', 'HNF4A', 'HNRNPD', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB8', 'ICAM1', 'ID1', 'ID2', 'IFNAR1', 'IFNB1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP3', 'IGFBP5', 'IHH', 'IKBKB', 'IL10', 'IL17A', 'IL2', 'IL4', 'IL6', 'IL7', 'CXCL8', 'ILK', 'INSM1', 'INS', 'IRF1', 'IRS1', 'ISG15', 'ITGB1', 'ITPKB', 'ITPKC', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUNB', 'JUND', 'JUN', 'KAT2A', 'KAT2B', 'KDM1A', 'KDM5B', 'KDR', 'KHDRBS1', 'KIF18B', 'KIN', 'KITLG', 'KIT', 'KLF13', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KRAS', 'KRT10', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LDB3', 'LEF1', 'LEP', 'LGALS3', 'LGR5', 'LIMK2', 'LIMS1', 'LIN28B', 'LMNA', 'LMNB1', 'LOX', 'LRP5', 'LRP6', 'LYN', 'MAFB', 'MAF', 'MAML1', 'MAML2', 'MAML3', 'MAMLD1', 'MAP2K1', 'MAP2K2', 'MAP2K4', 'MAP2K7', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDK', 'MDM2', 'MDM4', 'MEN1', 'MET', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'MLXIPL', 'MME', 'MMP11', 'MMP14', 'MMP15', 'MMP1', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MNAT1', 'MOV10', 'MSH2', 'MST1', 'MTOR', 'MUC1', 'MYBL2', 'MYB', 'MYCN', 'MYC', 'MYEOV', 'MYF5', 'MYOD1', 'MYOG', 'NACA2', 'NADSYN1', 'NANOG', 'NCAM1', 'NCOA1', 'NCOA3', 'NCOR1', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NGF', 'NKX2-1', 'NME1-NME2', 'NME1', 'NME2', 'NMI', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NQO1', 'NR0B2', 'NR1H3', 'NR2E1', 'NR3C1', 'NR4A3', 'NRAS', 'NRF1', 'NUDT21', 'ODC1', 'ORAI1', 'ORAOV1', 'ORC4', 'PAK1', 'PAK4', 'PARK2', 'PARP1', 'PAX2', 'PAX5', 'PAX6', 'PBRM1', 'PBX3', 'PCNA', 'PDCD4', 'PDGFRA', 'PDGFRB', 'PDZK1', 'PECAM1', 'PELP1', 'PGR', 'PI3', 'PI4K2A', 'PIK3CA', 'PIK3R1', 'PKLR', 'PKM', 'PLAUR', 'PLAU', 'PLK1', 'PMAIP1', 'POLR2A', 'POTEF', 'POU2F1', 'POU5F1', 'PPARG', 'PPP2R4', 'PRDM5', 'PRKACA', 'PRL', 'PRMT5', 'PRNP', 'PROM1', 'PSAT1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTCHD3', 'PTEN', 'PTF1A', 'PTGS2', 'PTHLH', 'PTH', 'PTK2', 'PTK6', 'PTPN11', 'PTPRCAP', 'PTPRC', 'PXN', 'RAD51', 'RAF1', 'RALA', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RBX1', 'RCC1', 'RELA', 'RELB', 'REL', 'REM1', 'RET', 'RHEB', 'RHOA', 'RHOC', 'RICTOR', 'RNASE1', 'DROSHA', 'RND3', 'RNMT', 'ROCK1', 'RPRD1B', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KA6', 'RPS6KB1', 'RPS6', 'RPTOR', 'RREB1', 'RSF1', 'RUNX1', 'RUNX2', 'RUNX3', 'SDC1', 'SDHC', 'SENP1', 'SERPINE1', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHC1', 'SHFM1', 'SHH', 'SIRT1', 'SIX1', 'SIX3', 'SKP1', 'SKP2', 'SLC25A16', 'SLC25A6', 'SLC2A1', 'SLC35B2', 'SLC39A4', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMO', 'SNAI1', 'SNAI2', 'SNCA', 'SNIP1', 'SNW1', 'SNX33', 'SOCS3', 'SOX11', 'SOX17', 'SOX2', 'SOX4', 'SOX6', 'SOX9', 'SP1', 'SPN', 'SPP1', 'SPRY1', 'SRC', 'SREBF1', 'STAT1', 'STAT3', 'STAT4', 'STAT5A', 'STAT5B', 'STAT6', 'STC2', 'STIM1', 'STK11', 'STK24', 'STMN1', 'SUFU', 'SULF2', 'SUV39H1', 'TAF1', 'TBP', 'TBX2', 'TCEAL7', 'TCF4', 'TCF7L2', 'TCF7', 'TERT', 'TET3', 'TFDP1', 'TFF1', 'TGFA', 'TGFB1', 'TGFBR2', 'THBS1', 'THRA', 'THRB', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLR9', 'TM4SF1', 'TMPRSS4', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF8', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP2A', 'TP53', 'TP63', 'TP73', 'TRPV2', 'TSC22D3', 'TSC2', 'TWIST1', 'TXN', 'TYMS', 'UBA52', 'UBA7', 'UBB', 'UBC', 'UBE2C', 'UBTF', 'URGCP', 'USP18', 'USP2', 'USP9X', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VIP', 'VRK1', 'WDR77', 'WDTC1', 'WEE1', 'WHSC1', 'WIF1', 'WISP1', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'XBP1', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YY1', 'ZBTB17', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 8.817808079129527e-16 NRMSE: 5.301011217329073e-16 MAPE: 1.4952870186246699e-12 Pearson Correlation: 0.12738969684922852 Spearman Correlation: 0.14571749097649012 Coefficient of Determination: -2.4312535166419424 RMSE: 0.4352080289085658 NRMSE: 0.3099595670535623 MAPE: 1487.2582921803216 Predictor: ElasticNet Pearson Correlation: 0.6668139596055919 Spearman Correlation: 0.6297048942603619 Coefficient of Determination: 0.3896159590191841 RMSE: 0.18664090822499194 NRMSE: 0.11220311660614393 MAPE: 323.4686233192635 Pearson Correlation: 0.45002104149129185 Spearman Correlation: 0.3854306896888109 Coefficient of Determination: 0.1664137846191256 RMSE: 0.21450911816321602 NRMSE: 0.15277556703550796 MAPE: 1132.9936824481572 Predictor: RandomForests Pearson Correlation: 0.5704725542385461 Spearman Correlation: 0.5547056754820439 Coefficient of Determination: 0.26297215871093493 RMSE: 0.20509128252867684 NRMSE: 0.12329494807605827 MAPE: 325.7250287173021 Pearson Correlation: 0.49912157464398055 Spearman Correlation: 0.46262315871622284 Coefficient of Determination: 0.22531475351959973 RMSE: 0.20679171639625385 NRMSE: 0.1472791553161172 MAPE: 1074.6486839065683 Protein: ERBB2 Protein Interaction Partners Count: 663 x_train_column_count: 657 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACPP', 'ACTA2', 'ACTB', 'ACTG1', 'ADAM10', 'ADAM17', 'ADRB2', 'AFP', 'AGRN', 'AKT1S1', 'AKT1', 'AKT2', 'ALB', 'ALDH1A1', 'ALK', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'ANO1', 'ANXA2', 'ANXA5', 'AP2B1', 'APP', 'AREG', 'ARHGEF11', 'ARHGEF12', 'ARID1A', 'ARL6IP5', 'AR', 'ATM', 'ATP2B2', 'AURKB', 'AXIN1', 'BAG1', 'BARD1', 'BCAR1', 'BCAR3', 'BCAS1', 'BCL2L11', 'BCL2L1', 'BDNF', 'BECN1', 'BEST1', 'BIRC5', 'BLNK', 'BMI1', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BSG', 'BTC', 'MIEN1', 'CA9', 'CALU', 'CARTPT', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAV1', 'CBLB', 'CBLC', 'CBL', 'CCL27', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD19', 'CD22', 'CD247', 'CD24', 'CD274', 'CD28', 'CD33', 'CD34', 'CD44', 'CD46', 'CD52', 'CD68', 'CD6', 'CD80', 'CD82', 'CDC37', 'CDC42', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK4', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CEACAM5', 'CEP70', 'CHEK2', 'CHGA', 'CHKA', 'CHKB', 'CISH', 'CLDN3', 'CLDN4', 'CLDN7', 'CLTC', 'CNN1', 'COPS5', 'CPNE3', 'CREB1', 'CRKL', 'CRK', 'YBX3', 'CSF1', 'CSF2', 'CSF3', 'CSK', 'CSPG4', 'CTAG1B', 'CTLA4', 'CTNNB1', 'CTNND1', 'CTSB', 'CTSD', 'CTTN', 'CUL5', 'CXCL12', 'CXCR1', 'CXCR4', 'CYCS', 'CYP19A1', 'CYTIP', 'DCN', 'DDX41', 'DDX53', 'DHH', 'DIAPH1', 'DICER1', 'DLG4', 'DMTF1', 'DNAJA3', 'DNM2', 'DNMT1', 'DOCK1', 'DOCK7', 'DUSP6', 'E2F1', 'E2F3', 'EEA1', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EGFR', 'EGF', 'EIF3A', 'EIF4EBP1', 'EIF4E', 'ELAVL1', 'ELF3', 'EML4', 'ENO2', 'EP300', 'EPCAM', 'EPGN', 'EPHA2', 'EPS15', 'EPX', 'ERAL1', 'ERBB2IP', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ERRFI1', 'ESCO1', 'ESR1', 'ESR2', 'ESRRB', 'ETS1', 'ETS2', 'ETV4', 'ETV6', 'EZH2', 'EZR', 'FASLG', 'FASN', 'FBXW7', 'FCGR1A', 'FCGR1B', 'FCGRT', 'FGF10', 'FGF13', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FIGF', 'FLT1', 'FLT3LG', 'FN1', 'FOLH1', 'FOLR1', 'FOS', 'FOXA1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXP3', 'FREM2', 'FSIP1', 'FYN', 'GAB1', 'GABPB1', 'GAPDH', 'GATA3', 'GATA4', 'GDF2', 'GLI1', 'GLI2', 'GLS', 'GNA11', 'GNAQ', 'GNAS', 'GNRH1', 'GPER1', 'GRAP2', 'GRB2', 'GRB7', 'GSTP1', 'GZMB', 'H2AFX', 'H2AFY', 'HBEGF', 'HDAC1', 'HDAC6', 'HEATR6', 'HGF', 'HIF1A', 'HK1', 'HLA-A', 'HMGA2', 'HNF4A', 'HOXB7', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPG2', 'ICAM1', 'ID1', 'IDH1', 'IDH2', 'IFNG', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IHH', 'IL10', 'IL2', 'IL4', 'IL6R', 'IL6ST', 'IL6', 'CXCL8', 'ILK', 'INPP4B', 'INS', 'IQGAP1', 'IQSEC1', 'IRS1', 'ITGA5', 'ITGA6', 'ITGAV', 'ITGB1', 'ITGB3', 'ITGB4', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JUN', 'JUP', 'KDR', 'KITLG', 'KLK3', 'KLRK1', 'KRAS', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'L1CAM', 'LAMP1', 'LCN2', 'LDHA', 'LEP', 'LIN28A', 'LIN7A', 'LIN7B', 'LIN7C', 'LINGO1', 'LOX', 'LRIG1', 'LRPPRC', 'MAGEA1', 'MAGEA3', 'MAGED4B', 'MAGED4', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK8', 'MATK', 'MCL1', 'MDK', 'MDM2', 'MEMO1', 'MET', 'MGMT', 'MKI67', 'MLANA', 'MLH1', 'KMT2C', 'MME', 'MMP11', 'MMP14', 'MMP16', 'MMP1', 'MMP2', 'MMP7', 'MMP9', 'MPP1', 'MRAP', 'MRAS', 'MSH2', 'MSH6', 'MSLN', 'MTA1', 'MTOR', 'MUC13', 'MUC16', 'MUC1', 'MUC4', 'MUC6', 'MUCL1', 'MYBL2', 'MYCN', 'MYC', 'NANOG', 'NCAM1', 'NCL', 'NCOA1', 'NCOA3', 'NCOR1', 'NDRG1', 'NF1', 'NF2', 'NFE2L2', 'NGF', 'NISCH', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NR1H4', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NRP1', 'NTF3', 'NTF4', 'OPCML', 'OSMR', 'PA2G4', 'PADI2', 'PAK1', 'PALB2', 'PAQR3', 'PARP1', 'PAX2', 'PCSK9', 'PDCD1LG2', 'PDCD1', 'PDCD4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PDGFRA', 'PDPN', 'PECAM1', 'PELP1', 'PEPD', 'PFKFB3', 'PGAP3', 'PGF', 'PGR', 'PI3', 'PIK3C2A', 'PIK3C2B', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIN1', 'PIP', 'PLAUR', 'PLAU', 'PLCG1', 'PLCG2', 'PLEK', 'PLG', 'PLXNB1', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPP3CA', 'PRDM10', 'PRF1', 'PRKACA', 'PRL', 'PROM1', 'PSCA', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'PTPN1', 'PTPRC', 'PTPRO', 'PTPRU', 'PTS', 'PXN', 'RAB25', 'RAD51', 'RAF1', 'RANBP2', 'RARA', 'RASA1', 'RASA2', 'RASSF1', 'RB1', 'RBPJ', 'RDX', 'RECK', 'REM1', 'REN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'S100A14', 'SCGB2A2', 'SCUBE2', 'SDC1', 'SDHC', 'SEMA3D', 'SEMA4D', 'SERPINB5', 'SERPINE1', 'SFRP1', 'PEAK1', 'SH3BGRL3', 'SH3BGRL', 'SH3TC2', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SIAH2', 'PMEL', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC4A7', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SMUG1', 'SMYD3', 'SNAI1', 'SNAI2', 'SOCS1', 'SOS1', 'SOX10', 'SOX2', 'SOX9', 'SP3', 'SPP1', 'SPRY2', 'SRCIN1', 'SRC', 'STARD3', 'STAT1', 'STAT2', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STOM', 'STUB1', 'SYP', 'TAGLN', 'TBX1', 'TERT', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TFRC', 'TGFA', 'TGFB1', 'THBS1', 'THRA', 'TIMP1', 'TJP1', 'TMPRSS2', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF4', 'TNFRSF8', 'TNFRSF9', 'TNFSF11', 'TNF', 'TNS1', 'TNS3', 'TNS4', 'TOB1', 'TOP1', 'TOP2A', 'TP53', 'TP63', 'TSC2', 'TWIST1', 'TYMS', 'TYR', 'UBA52', 'UBB', 'UBC', 'USP2', 'USP9X', 'VAV1', 'VAV2', 'VAV3', 'VCL', 'VEGFA', 'VEGFB', 'VEGFC', 'VIM', 'WASL', 'WDFY2', 'WDTC1', 'WNT10A', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7B', 'WNT9A', 'WNT9B', 'WT1', 'WWOX', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YES1', 'YY1', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 3.9870817084757075e-15 NRMSE: 6.792649894331409e-16 MAPE: 8.45350265817373e-12 Pearson Correlation: 0.3888149737434841 Spearman Correlation: 0.3902741195980881 Coefficient of Determination: -5.786950622187613 RMSE: 2.3630016064071833 NRMSE: 0.43816087639665924 MAPE: 3821.538752515044 Predictor: ElasticNet Pearson Correlation: 0.9321220814806886 Spearman Correlation: 0.8648205359887966 Coefficient of Determination: 0.8634477905461616 RMSE: 0.376601434490767 NRMSE: 0.06416025256670137 MAPE: 350.0854476716961 Pearson Correlation: 0.7807396239159669 Spearman Correlation: 0.6762364647351479 Coefficient of Determination: 0.5999070223864114 RMSE: 0.5737294412026684 NRMSE: 0.10638409812769672 MAPE: 300.4174813729314 Predictor: RandomForests Pearson Correlation: 0.8592275065106486 Spearman Correlation: 0.7016416755316447 Coefficient of Determination: 0.7329230976900414 RMSE: 0.5266847811685238 NRMSE: 0.08972942078275274 MAPE: 493.83700180961495 Pearson Correlation: 0.808275898810776 Spearman Correlation: 0.690173843290221 Coefficient of Determination: 0.6477535983426582 RMSE: 0.5383317006035483 NRMSE: 0.09982045255025929 MAPE: 358.447817975373 Protein: ERBB3 Protein Interaction Partners Count: 245 x_train_column_count: 247 x_train columns: ['ADAM17', 'AGRN', 'AGTR2', 'AKT1', 'AKT2', 'AKT3', 'ALAS2', 'ALB', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'APIP', 'AREG', 'AR', 'BAMBI', 'BDNF', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BTC', 'CADM4', 'CASK', 'CASP3', 'CBLB', 'CBLC', 'CBL', 'CCND1', 'CCNE1', 'CD44', 'CD82', 'CDC42', 'CDH1', 'CDK4', 'CDK5', 'CDKN1B', 'CDKN2A', 'CLEC16A', 'COMMD5', 'COQ7', 'CRKL', 'CRK', 'CRYZL1', 'CSF1', 'CSK', 'CSPG5', 'CTNNB1', 'DCN', 'DHH', 'DOCK7', 'DUSP6', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EIF4EBP1', 'EIF4E', 'EML4', 'EPCAM', 'EPGN', 'EPN1', 'ERBB2IP', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'ESR2', 'FBXO9', 'FGF10', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FIGF', 'FKBP14', 'FLNA', 'FLT3LG', 'FN1', 'FOXA1', 'FOXO3', 'FREM2', 'FTSJ1', 'GAB1', 'GAPDH', 'GLE1', 'GRB2', 'GRB7', 'GRHL2', 'HBEGF', 'HGF', 'HGS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPG2', 'IGF1', 'IGF2', 'IL6ST', 'ILK', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'ITPKB', 'JAK1', 'JAK2', 'JUN', 'KDR', 'KITLG', 'KRAS', 'L1CAM', 'LAMA1', 'LAMB1', 'LAMC2', 'LIN7A', 'LIN7B', 'LIN7C', 'LRIG1', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARCH7', 'MDM2', 'MET', 'MITF', 'MMP9', 'MRPL49', 'MTOR', 'MUC1', 'MUC4', 'MYC', 'N4BP1', 'NDRG1', 'NEDD4L', 'NEDD4', 'NF1', 'NGF', 'NICN1', 'NOTCH1', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NTF3', 'NTF4', 'OAT', 'PA2G4', 'PARK7', 'PCSK9', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PGR', 'PI3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIP5K1C', 'PLCG1', 'PLCG2', 'PPP1R9A', 'PRKACA', 'PTEN', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN22', 'PTPN2', 'RASA1', 'RASA2', 'REM1', 'RGS4', 'RHOA', 'RHOC', 'RNF41', 'ROR1', 'RRAS2', 'SH2B3', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SLC25A16', 'SMAD4', 'SNAI2', 'SOS1', 'SOX10', 'SOX2', 'SPARC', 'SPRY2', 'SRC', 'STAT3', 'STAT5A', 'STAT5B', 'SYN3', 'TCF7L2', 'TGFA', 'TMEFF2', 'TNFRSF13C', 'TNS1', 'TP53', 'USP8', 'VAV1', 'VAV2', 'VAV3', 'VEGFA', 'VEGFB', 'VEGFC', 'WNT1', 'WNT5A', 'ZEB1', 'ZNF217', 'KRBOX4', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.753591858080306 Spearman Correlation: 0.7441165627330231 Coefficient of Determination: 0.5679006885649278 RMSE: 0.3018110564316248 NRMSE: 0.08145014166397915 MAPE: 167.64854393991953 Pearson Correlation: 0.205415221213176 Spearman Correlation: 0.26358680078402286 Coefficient of Determination: -2.9381873210742624 RMSE: 0.923816404894778 NRMSE: 0.3706890427961198 MAPE: 341.68887902145053 Predictor: ElasticNet Pearson Correlation: 0.632050110091276 Spearman Correlation: 0.6201578639335568 Coefficient of Determination: 0.37789579281946906 RMSE: 0.3621386911245626 NRMSE: 0.0977308387666241 MAPE: 182.42273101138173 Pearson Correlation: 0.4325504039603851 Spearman Correlation: 0.4400478490490164 Coefficient of Determination: 0.18332690330452017 RMSE: 0.4206894391559825 NRMSE: 0.16880514860842902 MAPE: 207.0740034507034 Predictor: RandomForests Pearson Correlation: 0.5720995884106573 Spearman Correlation: 0.5663929332364112 Coefficient of Determination: 0.30118296599150474 RMSE: 0.38381778930159044 NRMSE: 0.10358140513931847 MAPE: 235.7950036897269 Pearson Correlation: 0.39661158095516746 Spearman Correlation: 0.40844845435653027 Coefficient of Determination: 0.1484584351866245 RMSE: 0.42957639677532594 NRMSE: 0.17237111452528164 MAPE: 269.5480647617531 Fold: 2 Protein: RB1 Protein Interaction Partners Count: 369 x_train_column_count: 366 x_train columns: ['AATF', 'ABCC1', 'ABL1', 'ACTL6A', 'ACTL6B', 'AFAP1', 'AHR', 'AKT1', 'ANXA5', 'ARID1A', 'ARID1B', 'ARID4A', 'ARMCX1', 'ARMCX2', 'ARMCX3', 'ARNT', 'AR', 'ASF1A', 'ATF2', 'ATM', 'AURKB', 'BCR', 'BDP1', 'BGLAP', 'BRCA1', 'BRF1', 'FAM208A', 'C4BPA', 'CABIN1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CBFB', 'CBX1', 'CBX4', 'CBX5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNT2', 'CDC25A', 'CDC27', 'CDC6', 'CDH1', 'CDK14', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPA', 'CEBPB', 'CEBPD', 'CEBPE', 'CHEK1', 'CHEK2', 'CLNK', 'COL1A1', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUX1', 'DCAF10', 'DGKZ', 'DNAJA3', 'DNMT1', 'DNMT3A', 'DUSP1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EGFR', 'EGF', 'EID1', 'EIF2AK1', 'EIF2AK4', 'AGO2', 'ELF1', 'ENC1', 'EP300', 'ERBB2', 'ESD', 'ESR1', 'ESR2', 'EZH2', 'FBXW7', 'FMO5', 'FOS', 'FOXM1', 'FRK', 'FZR1', 'G6PD', 'GAPDH', 'GATA1', 'GJA1', 'GNB2L1', 'GRB2', 'GSC', 'GTF2H1', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HARS2', 'HARS', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC8', 'HDC', 'HES1', 'HIF1A', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HIST4H4', 'HMGA1', 'HMGA2', 'HRAS', 'HSP90AA1', 'HSPA1A', 'HSPA8', 'ID2', 'IFI16', 'INS', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'KDM2A', 'KDM4A', 'KDM5A', 'KDM5B', 'PPP1R26', 'KIF11', 'KRAS', 'KRT10', 'KRT14', 'KRT5', 'L3MBTL2', 'L3MBTL1', 'LIMD1', 'LIN52', 'LIN54', 'LIN9', 'LMNA', 'LOR', 'LPAR6', 'MAF', 'MAP2K7', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEF2C', 'MORF4L1', 'MRFAP1', 'MRPL11', 'MRPS18B', 'MSH6', 'MTL5', 'MYBL2', 'MYC', 'MYOD1', 'NACC2', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NCR1', 'NDC80', 'NEO1', 'NFYA', 'NFYB', 'NFYC', 'NGF', 'NOTCH1', 'NPM1', 'NRAS', 'ORC1', 'PA2G4', 'PAX2', 'PAX3', 'PAX5', 'PAX6', 'PAX8', 'PCNA', 'PELP1', 'PGR', 'PHB', 'PHF21B', 'PIAS4', 'PIK3CA', 'PIK3R1', 'PIK3R3', 'PLK1', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPIA', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP1R3A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R3B', 'PPRC1', 'PRB1', 'PRB3', 'PRB4', 'PRDM2', 'PRH1', 'PRH2', 'PRIM1', 'PRIM2', 'PRKCB', 'PRMT2', 'PSMA7', 'PSMC1', 'PSMD10', 'PTEN', 'PTGDR', 'RAF1', 'RB1CC1', 'RBAK', 'RBBP4', 'RBBP5', 'RBBP6', 'RBBP7', 'RBBP8', 'RBBP9', 'RBL1', 'RBL2', 'RBFOX2', 'RFC1', 'RPS6KB1', 'RUNX2', 'S100A6', 'SETD1B', 'SETD7', 'SIRT1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMC1A', 'SMC2', 'SMC4', 'SMC5', 'SMYD2', 'SNW1', 'SP100', 'SP1', 'SP3', 'SPI1', 'STAM', 'STAT3', 'SUV39H1', 'SUV420H2', 'SUZ12', 'TAF1', 'TBP', 'TERT', 'TFAP2A', 'TFDP1', 'TFDP3', 'TGM2', 'THAP1', 'TMPO', 'TNS1', 'TOP2A', 'TP53BP1', 'TP53', 'TP73', 'TRDMT1', 'TRIM27', 'TTK', 'UBE2I', 'UBE3A', 'UBL4A', 'UBN1', 'UBR4', 'UBTF', 'UHRF1', 'USP4', 'USP7', 'VEGFA', 'VPS39', 'WDR59', 'WDR73', 'WEE1', 'WWTR1', 'YAP1', 'YY1', 'ZBTB16', 'ZBTB7A', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.8222120971652733 Spearman Correlation: 0.7728642513585217 Coefficient of Determination: 0.6760327327249172 RMSE: 0.13378100287003275 NRMSE: 0.048925176590854574 MAPE: 419.3633586117949 Pearson Correlation: 0.1909095928668004 Spearman Correlation: 0.12357330992098334 Coefficient of Determination: -8.534536192569421 RMSE: 0.756215770595914 NRMSE: 0.4332571934525295 MAPE: 1799.9685952625398 Predictor: ElasticNet Pearson Correlation: 0.4754945593717363 Spearman Correlation: 0.5035217259634415 Coefficient of Determination: 0.18825261638572155 RMSE: 0.21176507175367487 NRMSE: 0.07744480388885126 MAPE: 186.76289577810056 Pearson Correlation: 0.13262302183573568 Spearman Correlation: 0.16980782362696326 Coefficient of Determination: -0.0280420209435841 RMSE: 0.24831409824440706 NRMSE: 0.14226610113577653 MAPE: 267.7572243103132 Predictor: RandomForests Pearson Correlation: 0.5919612974425094 Spearman Correlation: 0.47126444887150715 Coefficient of Determination: 0.2043066486092442 RMSE: 0.20966056199598465 NRMSE: 0.07667516164276794 MAPE: 149.7410241705184 Pearson Correlation: 0.07542296428162835 Spearman Correlation: 0.12394888303580141 Coefficient of Determination: -0.025932392806574223 RMSE: 0.2480591867621438 NRMSE: 0.1421200552085709 MAPE: 194.5870804018028 Protein: CDH1 Protein Interaction Partners Count: 834 x_train_column_count: 826 x_train columns: ['ABCB1', 'ABCG2', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTR3', 'ACVR1B', 'ADAM10', 'ADAM15', 'ADAM17', 'ADAM9', 'AFP', 'AIMP1', 'AJAP1', 'AKAP9', 'AKT1', 'AKT2', 'AKTIP', 'ALB', 'ALCAM', 'ALDH1A1', 'ALDH3A1', 'ALK', 'AMOTL2', 'ANAPC4', 'ANAPC7', 'ANO1', 'ANXA2', 'ANXA5', 'AP1M1', 'AP1M2', 'APC2', 'APC', 'AQP1', 'AQP5', 'AREG', 'ARF6', 'ARHGAP31', 'ARID1A', 'ARL2BP', 'ARMC7', 'ARPC1A', 'ARPC2', 'ARRB2', 'ARVCF', 'AR', 'CLMP', 'ASF1A', 'ATF2', 'ATF3', 'ATM', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BAG3', 'BANP', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL6B', 'BCL9L', 'BCORL1', 'BMI1', 'BMP2', 'BMP4', 'BMP6', 'BMP7', 'BNIP3', 'BRCA1', 'BRCA2', 'BSG', 'BTBD7', 'BTC', 'BTF3', 'ANAPC15', 'CA2', 'CA9', 'CALCA', 'CALR', 'CAPN1', 'CAPNS1', 'CASP3', 'CASP8', 'CASP9', 'CASS4', 'CAV1', 'CBLL1', 'CBL', 'CBX7', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CCR7', 'CD1A', 'CD1B', 'CD1C', 'CD1E', 'CD207', 'CD24', 'CD274', 'CD276', 'CD2AP', 'CD34', 'CD44', 'CD46', 'CD68', 'CD82', 'CDC16', 'CDC23', 'CDC27', 'CDC42', 'CDC6', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH24', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK14', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN3', 'CDX2', 'CEACAM5', 'CFL1', 'CGN', 'CHGA', 'CHL1', 'CLCA2', 'CLDN1', 'CLDN2', 'CLDN3', 'CLDN4', 'CLDN5', 'CLDN7', 'CNTN1', 'COL1A1', 'CORO1C', 'CRB3', 'CREB1', 'CREBBP', 'CRYAB', 'YBX3', 'CSDC2', 'CSE1L', 'CSF2', 'CSNK2A1', 'CSNK2A2', 'CST5', 'CTBP1', 'CTBP2', 'CTCF', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTSL', 'CTTN', 'CXCL12', 'CXCL1', 'CXCR4', 'CYP1B1', 'DAAM1', 'DAB2IP', 'DACH1', 'DAPK1', 'DAP', 'DDR1', 'DDR2', 'DDX3X', 'DICER1', 'DKK1', 'DLC1', 'DLG1', 'DLG5', 'DNM2', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOT1L', 'DPAGT1', 'DPEP1', 'DSP', 'DUOX1', 'DUSP4', 'DVL1', 'DVL2', 'E2F1', 'ECT2', 'EDN1', 'EFEMP1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'EHD1', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'ELAVL1', 'ELF3', 'ENAH', 'ENG', 'EP300', 'EPB41L3', 'EPCAM', 'EPHA10', 'EPHA1', 'EPHA2', 'EPPK1', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ESRP1', 'ESRP2', 'ETS1', 'ETS2', 'EXOC3', 'EXOC4', 'EYA2', 'EZH2', 'EZR', 'F11R', 'F2RL2', 'SUPT20H', 'FBXL5', 'FER', 'FGF10', 'FGF13', 'FGF17', 'FGF19', 'FGF2', 'FGF4', 'FGF5', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FMN1', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC1', 'FOXC2', 'FOXJ2', 'FOXK2', 'FOXL1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXQ1', 'FRMPD2', 'FSCN1', 'FUT4', 'FXYD5', 'FYN', 'FZD1', 'FZD4', 'FZD7', 'FZR1', 'G6PD', 'GAB2', 'GABPA', 'GADD45A', 'GAPDH', 'GAS6', 'GATA1', 'GATA3', 'GATA4', 'GATA6', 'GDNF', 'GFRA1', 'GGT1', 'GJA1', 'GJB1', 'GJB2', 'GKN2', 'GLI1', 'GLI2', 'GMNN', 'GNA12', 'GNA13', 'GNB2L1', 'GNL3', 'GPA33', 'GRB2', 'GRHL2', 'GRHL3', 'GSK3B', 'GSN', 'GSTP1', 'H2AFZ', 'HAVCR2', 'HBEGF', 'HDAC1', 'HDAC2', 'HEPACAM', 'HES1', 'HGF', 'HGS', 'HIF1A', 'HMGA2', 'HNF4A', 'HOXB4', 'HOXD10', 'HPGDS', 'HPGD', 'HRAS', 'HSP90AA1', 'HSPA5', 'ICAM1', 'ID1', 'ID2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP3', 'IL10', 'IL15', 'IL17A', 'IL1B', 'IL24', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IQSEC1', 'IRS1', 'IRS2', 'ITGA5', 'ITGA6', 'ITGAE', 'ITGAM', 'ITGB1', 'ITGB4', 'ITGB7', 'ITPKB', 'IVL', 'JAG1', 'JAK2', 'AJUBA', 'JUN', 'JUP', 'KDM1A', 'KDM6A', 'KDR', 'KEAP1', 'KIFC3', 'KIT', 'KLF4', 'KLF5', 'KLF8', 'KLK3', 'KLK7', 'KLRG1', 'KRAS', 'KRT10', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'KRT9', 'LAMA1', 'LAMB1', 'LAMC2', 'LASP1', 'LATS1', 'LATS2', 'LCN2', 'LEF1', 'LEP', 'LGALS3', 'LGALS4', 'LGALS9', 'LGR5', 'LIF', 'LIMA1', 'LIN28A', 'LIPG', 'LLGL2', 'LMNA', 'LOR', 'LOXL2', 'LOXL3', 'LOX', 'LRP5', 'LRP6', 'LY6K', 'MACC1', 'MACROD1', 'MAD2L2', 'MAGI1', 'MAP2K1', 'MAP2K7', 'MAP4K5', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARK2', 'MARVELD2', 'MCAM', 'MCL1', 'MDM2', 'MED1', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGAT5', 'MGMT', 'MKI67', 'MLH1', 'MLLT4', 'MME', 'MMP11', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP1', 'MMP25', 'MMP27', 'MMP2', 'MMP3', 'MMP7', 'MMP8', 'MMP9', 'MPP5', 'MRAP', 'MSH2', 'MSN', 'MT1G', 'MTA1', 'MTA3', 'MTBP', 'MTDH', 'MTOR', 'MUC1', 'MUC4', 'MYCN', 'MYC', 'MYH6', 'MYO6', 'MYO7A', 'NANOG', 'NCAM1', 'NCOA1', 'NCSTN', 'NDRG1', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEUROG3', 'NF2', 'NFE2L2', 'NFIC', 'NKD2', 'NKX2-1', 'NKX6-1', 'NKX6-2', 'NME1', 'NOG', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NR2F1', 'NRP2', 'NUDT21', 'NUMBL', 'NUMB', 'NUP98', 'NUTF2', 'OTUB1', 'OVOL1', 'OVOL2', 'PARD3', 'PARD6A', 'PAX2', 'PAX5', 'PAX6', 'PAX8', 'PCSK9', 'PDCD4', 'PDGFRB', 'PDPN', 'PEBP1', 'PECAM1', 'PGR', 'PHLPP1', 'PI3', 'PIK3CA', 'PIK3R1', 'PIP5K1A', 'PIP5K1C', 'PIP', 'PIR', 'PITX1', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAUR', 'PLAU', 'PLCD1', 'PLEKHA7', 'PLG', 'PODXL', 'POLR2C', 'POSTN', 'POTEF', 'POU5F1', 'PPARA', 'PPARGC1A', 'PPARG', 'PPL', 'PPP6C', 'PRAME', 'PRDM10', 'PRKAR1A', 'PRKCA', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRKG1', 'PRMT5', 'PROC', 'PROM1', 'PRSS8', 'PSEN1', 'PTCH1', 'PTEN', 'PTF1A', 'PTGS2', 'PTK2', 'PTPN11', 'PTPN14', 'PTPRC', 'PTPRF', 'PTPRJ', 'PTPRM', 'PTPRS', 'PTPRT', 'PTPRU', 'PTRH2', 'PVRL1', 'PVRL2', 'PVR', 'PXN', 'RAB11A', 'RAB25', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RACGAP1', 'RAF1', 'RALA', 'RALBP1', 'RALGDS', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RARB', 'RASSF1', 'RB1', 'RBM4', 'RCOR1', 'RDX', 'REM1', 'RET', 'RHOA', 'RHOB', 'RHOC', 'RHOD', 'RICTOR', 'RND3', 'ROCK1', 'ROCK2', 'RPS6KB1', 'RPTOR', 'RRM2', 'RUNX2', 'RUNX3', 'S100A14', 'S100A4', 'S100A8', 'SATB1', 'SCRIB', 'SDC1', 'SDC4', 'SDHC', 'SELE', 'SELL', 'SELP', 'SEMA3C', 'SEMA3F', 'SENP1', 'SERPINB4', 'SERPINB5', 'SERPINE1', 'SFN', 'SFRP1', 'SFRP2', 'SFTPC', 'SHH', 'SIK1', 'SIN3A', 'SIRT1', 'SIRT2', 'SIRT4', 'SIRT7', 'SIX1', 'SIX2', 'SKIL', 'SKP2', 'SLC2A1', 'SLC39A6', 'SLC6A3', 'SLC9A3R1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SNAI1', 'SNAI2', 'SNAI3', 'SNX16', 'SNX1', 'SOX10', 'SOX17', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPARC', 'SPDEF', 'SPINT1', 'SPP1', 'SPRY1', 'SRCIN1', 'SRC', 'SRXN1', 'ST14', 'ST7L', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STX4', 'STYK1', 'SUCLG2', 'SUMO1', 'SUZ12', 'SYNJ2', 'SYP', 'TACC3', 'TACSTD2', 'TATDN1', 'TBX1', 'TBX3', 'TCF15', 'TCF4', 'TDGF1', 'TERT', 'TET2', 'TFF1', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBI', 'TGFBR1', 'TGFBR2', 'THBS1', 'THEM4', 'THUMPD1', 'THY1', 'TIAM1', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLN1', 'TLR4', 'TMPRSS2', 'TMPRSS4', 'TNFRSF6B', 'TNF', 'TNK2', 'TNS1', 'TP53BP1', 'TP53BP2', 'TP53', 'TRIM21', 'TRIM29', 'TRIM44', 'TRIP10', 'TRPS1', 'TSPYL2', 'TWIST1', 'TWIST2', 'TYRP1', 'T', 'UBE2I', 'UBE2S', 'USP48', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VEZT', 'VHL', 'VIM', 'VIPAS39', 'VPS33B', 'VTN', 'WASL', 'WDFY2', 'WDTC1', 'WIF1', 'WISP1', 'WISP3', 'WNT10A', 'WNT10B', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT9A', 'WNT9B', 'WT1', 'XIAP', 'YAP1', 'YBX1', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 4.3036751578541215e-15 NRMSE: 6.904107095298182e-16 MAPE: 2.4438550276280296e-12 Pearson Correlation: 0.39203219428612546 Spearman Correlation: 0.426319383474783 Coefficient of Determination: -2.01837644350428 RMSE: 1.999026682992449 NRMSE: 0.3550038506468565 MAPE: 852.6852605747722 Predictor: ElasticNet Pearson Correlation: 0.8897840757019548 Spearman Correlation: 0.8376045413108079 Coefficient of Determination: 0.7675463752061457 RMSE: 0.5402785749856271 NRMSE: 0.08667338974663144 MAPE: 353.83000166091927 Pearson Correlation: 0.6151617204423869 Spearman Correlation: 0.6049556140864307 Coefficient of Determination: 0.3205598241891575 RMSE: 0.9484348451833751 NRMSE: 0.16843097943231664 MAPE: 300.50986852460426 Predictor: RandomForests Pearson Correlation: 0.7806867396346588 Spearman Correlation: 0.6867325687217668 Coefficient of Determination: 0.6038524604986277 RMSE: 0.705306791485822 NRMSE: 0.11314779682133985 MAPE: 183.36488246446947 Pearson Correlation: 0.6614671656077069 Spearman Correlation: 0.6570131133887294 Coefficient of Determination: 0.3963484324584017 RMSE: 0.8939743457162135 NRMSE: 0.15875942918064526 MAPE: 217.42057197521228 Protein: CDH2 Protein Interaction Partners Count: 472 x_train_column_count: 467 x_train columns: ['ABCG2', 'ABL1', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTR3', 'ADAM10', 'ADH1A', 'AFP', 'AHSG', 'AKT1', 'AKT3', 'ALB', 'ALCAM', 'ALDH1A1', 'AMBN', 'AMELX', 'AMOTL1', 'AMTN', 'ANGPT1', 'ANO8', 'ANXA5', 'APC2', 'APC', 'APLP2', 'APOA1', 'APOA2', 'APOA5', 'APOB', 'APOE', 'APOL1', 'APPL1', 'APP', 'ARHGAP32', 'ARMC7', 'ARPC5', 'ARVCF', 'AR', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BCL2L1', 'BDNF', 'BMI1', 'BMP15', 'BMP2', 'BMP4', 'BMP7', 'BNIP2', 'BOC', 'BPIFB2', 'RGCC', 'GSKIP', 'C3', 'C4A', 'CABLES1', 'CADM1', 'CALU', 'CASP3', 'CAV1', 'CBLL1', 'CCNA2', 'CCNB1', 'CCND1', 'CD24', 'CD34', 'CD44', 'CD80', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK4', 'CDK5', 'CDK6', 'CDKN2A', 'CDON', 'CDX2', 'CEBPZ', 'CFL1', 'CHGB', 'CHL1', 'CHRDL1', 'CKAP4', 'CLDN11', 'CLDN3', 'CLDN4', 'CLDN7', 'CORT', 'CP', 'CREBBP', 'CRP', 'CSF1', 'CSK', 'CST3', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTTN', 'CXCL12', 'CXCR4', 'CYLD', 'CYR61', 'DBN1', 'DDR1', 'DDR2', 'DKK1', 'DLG4', 'DLG5', 'DMP1', 'DNAJC3', 'DSP', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EFNB2', 'EFNB3', 'EGFR', 'EGF', 'EHMT2', 'EIF2AK3', 'ENAM', 'ENG', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA4', 'EPHB2', 'EPS8', 'ERBB2', 'ERBB4', 'ESR1', 'ESRP1', 'EXOC4', 'EZH2', 'EZR', 'F11R', 'F5', 'EVA1A', 'FAM20A', 'FAM20C', 'FBN1', 'FER', 'FGA', 'FGF13', 'FGF23', 'FGF2', 'FGFR1', 'FGFR4', 'FGG', 'FN1', 'FOXC2', 'FOXD3', 'FOXO1', 'FOXP4', 'FSTL1', 'FSTL3', 'FUCA2', 'GAA', 'GAPDH', 'GAS6', 'GATA4', 'GFAP', 'GJA10', 'GJA1', 'GJA3', 'GJB6', 'GJC1', 'GJC3', 'GJD3', 'GJD4', 'GLI1', 'GOLM1', 'GPC3', 'GRIA1', 'GRIA2', 'HGF', 'HMGA2', 'HNF4A', 'HRAS', 'HRC', 'HSP90B1', 'HSPA5', 'IARS2', 'IGF1R', 'IGF1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL1B', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'INVS', 'IQGAP1', 'ISL1', 'ITGA6', 'ITGB1', 'ITIH2', 'ITPKB', 'JAG1', 'JAM3', 'JUN', 'JUP', 'KCNA5', 'KDR', 'KIAA2022', 'KIF5B', 'KIT', 'KLF4', 'KNG1', 'KRAS', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT8', 'KTN1', 'L1CAM', 'LAMB1', 'LAMB2', 'LAMC1', 'LEF1', 'LGALS1', 'LRP5', 'LRP6', 'LRRC7', 'LTBP1', 'LTBP3', 'MAP1B', 'MAP2K6', 'MAP2K7', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MATN3', 'MBTPS1', 'MCAM', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEPE', 'MET', 'MFGE8', 'MFI2', 'MGAT4A', 'MIA3', 'MKI67', 'MLLT4', 'MMP14', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MPDZ', 'MPP5', 'MRAP', 'MRPL49', 'MSLN', 'MSN', 'MTHFD1', 'MUC1', 'MUC4', 'MXRA8', 'MYC', 'MYO10', 'MZF1', 'NANOG', 'NCAM1', 'NCSTN', 'NDRG1', 'NENF', 'NES', 'NFASC', 'NGF', 'NKX2-5', 'NLGN1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTUM', 'NRCAM', 'NT5C', 'NT5E', 'NTRK2', 'NUCB1', 'NUMBL', 'NUMB', 'OLFM3', 'P4HB', 'PARD3', 'PAX6', 'PCSK9', 'PC', 'PDGFRB', 'PDIA4', 'PDIA6', 'PECAM1', 'PENK', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PITX2', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PNPLA2', 'POU5F1', 'PPT2', 'PRKCDBP', 'PRKCSH', 'PROC', 'PROM1', 'PRPH', 'PRSS23', 'PSEN1', 'PTEN', 'PTK2', 'PTPN11', 'PTPN1', 'PTPN2', 'PTPRC', 'PTPRS', 'PVRL1', 'PVRL2', 'PVRL3', 'PXN', 'QSOX1', 'RAB11FIP1', 'RAB3D', 'RAB5A', 'RAC1', 'RCN1', 'RELN', 'REM1', 'RHOA', 'RHOB', 'RHOC', 'ROBO1', 'PTBP3', 'RPS6KB1', 'RUNX2', 'S100A14', 'S100A4', 'SARS2', 'SCARB2', 'SCG2', 'SCG3', 'SDC2', 'SEMA3A', 'SENP3', 'SERPINA10', 'SERPINA1', 'SERPINC1', 'SERPIND1', 'SERPINE1', 'SHH', 'SHISA5', 'SIRT7', 'SKP1', 'SLC2A1', 'SLC9A3R1', 'SLIT1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SNAI1', 'SNAI2', 'SNAI3', 'SOX10', 'SOX18', 'SOX1', 'SOX2', 'SOX4', 'SOX9', 'SP7', 'SPAG9', 'SPARCL1', 'SPARC', 'SPP1', 'SPP2', 'SRC', 'ST6GALNAC5', 'STAT3', 'STC2', 'SYP', 'TBX1', 'TCF3', 'TEK', 'TF', 'TGFB1', 'TGFBR1', 'TGM2', 'TGOLN2', 'THY1', 'TIMP1', 'TJP1', 'TJP3', 'TMEM132A', 'TNC', 'TNF', 'TNNT1', 'TP53', 'TRPS1', 'TSC2', 'TWIST1', 'TWIST2', 'USP9X', 'VANGL2', 'VCAM1', 'VCAN', 'VCL', 'VEGFA', 'VGF', 'VIM', 'VTN', 'VWA1', 'WFS1', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7A', 'XIRP1', 'ZBTB16', 'ZEB1', 'ZEB2', 'ZSCAN1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.9445075352242435 Spearman Correlation: 0.9175540951224843 Coefficient of Determination: 0.892094484095375 RMSE: 0.12091651402897433 NRMSE: 0.04381350606166184 MAPE: 472.83839110422423 Pearson Correlation: -0.0880078383171512 Spearman Correlation: -0.08461613501121844 Coefficient of Determination: -32.74175805826209 RMSE: 2.2484591892073076 NRMSE: 1.1845404727749926 MAPE: 2373.512113566102 Predictor: ElasticNet Pearson Correlation: 0.6192258655541377 Spearman Correlation: 0.5978889868954302 Coefficient of Determination: 0.33557304510645436 RMSE: 0.3000457066688405 NRMSE: 0.10872009082862545 MAPE: 974.246248874667 Pearson Correlation: 0.2621565742983969 Spearman Correlation: 0.24006926153545996 Coefficient of Determination: 0.06670844640752993 RMSE: 0.3739468020016788 NRMSE: 0.19700385213214772 MAPE: 338.5773881401074 Predictor: RandomForests Pearson Correlation: 0.5482233699794163 Spearman Correlation: 0.47495578566105146 Coefficient of Determination: 0.1763585814493952 RMSE: 0.33406646720396765 NRMSE: 0.1210473466207579 MAPE: 450.2023217682974 Pearson Correlation: 0.23214368046879805 Spearman Correlation: 0.33307969954150823 Coefficient of Determination: 0.04108356361491117 RMSE: 0.3790456676193911 NRMSE: 0.199690052850583 MAPE: 110.18428875041191 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.5750222934418497 Spearman Correlation: 0.5464477708979472 Coefficient of Determination: 0.33065063795512506 RMSE: 0.16993269557651747 NRMSE: 0.12789106558632488 MAPE: 280.5599204068399 Pearson Correlation: 0.15129344217314186 Spearman Correlation: 0.33341137450004876 Coefficient of Determination: -0.454023866366031 RMSE: 0.23866673811947609 NRMSE: 0.19638503918330957 MAPE: 1617.359666454866 Predictor: ElasticNet Pearson Correlation: 0.508310698807099 Spearman Correlation: 0.5129329823179457 Coefficient of Determination: 0.2426565430808516 RMSE: 0.18075776318495312 NRMSE: 0.13603799356148585 MAPE: 237.0882024645646 Pearson Correlation: 0.2675737940154392 Spearman Correlation: 0.342054433713784 Coefficient of Determination: -0.07560325265547219 RMSE: 0.2052731673488429 NRMSE: 0.16890740339738577 MAPE: 1506.8127446414048 Predictor: RandomForests Pearson Correlation: 0.5643420869215559 Spearman Correlation: 0.5595064484259596 Coefficient of Determination: 0.2915569262179636 RMSE: 0.17482478344760996 NRMSE: 0.1315728428255627 MAPE: 361.8509709984862 Pearson Correlation: 0.26611478629025903 Spearman Correlation: 0.37114427860696525 Coefficient of Determination: -0.07708413457356866 RMSE: 0.20541442796788412 NRMSE: 0.1690236385813249 MAPE: 1459.15447534378 Protein: PTEN Protein Interaction Partners Count: 884 x_train_column_count: 876 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ABTB1', 'ACTB', 'ACTG1', 'ADM', 'AEBP1', 'AFP', 'AKT1S1', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'AMHR2', 'ANXA2', 'ANXA5', 'APAF1', 'APC', 'ARAF', 'AREG', 'ARHGAP21', 'ARID1A', 'ARID2', 'ARL2BP', 'AR', 'ATF3', 'ATG12', 'ATG5', 'ATG7', 'ATM', 'ATRX', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'AXL', 'BAD', 'BAG5', 'BARD1', 'BAX', 'BBC3', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BIRC3', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BNIP3', 'BRAF', 'BRCA1', 'BRCA2', 'BRD4', 'BTG2', 'BTK', 'SPRTN', 'CLHC1', 'CA9', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBL', 'CBX7', 'CCL2', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD24', 'CD274', 'CD34', 'CD44', 'CD79A', 'CD79B', 'CDC14A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC7', 'CDH17', 'CDH1', 'CDH2', 'CDIPT', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CENPC', 'CFL1', 'CFLAR', 'CFTR', 'CHD1', 'CHD8', 'CHEK1', 'CHEK2', 'CHKA', 'CHORDC1', 'CHUK', 'CLTCL1', 'CLTC', 'CNOT6L', 'CREB1', 'CREBBP', 'CRP', 'CSF1R', 'CSF1', 'CSK', 'CSN2', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTGF', 'CTLA4', 'CTNNB1', 'CUL1', 'CUL3', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'DAPK1', 'DAXX', 'DBN1', 'DCAF13', 'DDIT4', 'DDR2', 'DECR1', 'DEPTOR', 'DGCR8', 'DICER1', 'DLC1', 'DLG1', 'DLG4', 'DNM1L', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOLPP1', 'DUSP1', 'DUSP6', 'DUT', 'DVL1', 'DYRK1A', 'E2F1', 'E2F2', 'E2F3', 'ECSCR', 'EGFR', 'EGF', 'EGR1', 'EIF2AK2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4EBP2', 'EIF4E', 'EIF4G1', 'EML4', 'ENDOG', 'EP300', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA3', 'EPHA4', 'EPHA5', 'EPHA7', 'EPHB1', 'EPHB2', 'EPHB3', 'EPHB4', 'ERBB2', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ESR1', 'ETS1', 'ETS2', 'ETV1', 'ETV6', 'EYA2', 'EZH2', 'EZR', 'FABP4', 'FASLG', 'FASN', 'FBXW7', 'FCGR1B', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FIG4', 'FKBP1A', 'FLCN', 'FLT1', 'FLT3', 'FLT4', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXG1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FOXP3', 'FRK', 'FYN', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GCK', 'GDF10', 'GDF2', 'GFAP', 'GJA1', 'GLI1', 'GNA11', 'GNAQ', 'GNAS', 'GNRHR', 'GRASP', 'GRB2', 'GRPR', 'GSK3A', 'GSK3B', 'GSTP1', 'H1F0', 'H2AFX', 'HAVCR2', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HES1', 'HGF', 'HIF1A', 'HIST1H2BA', 'HK1', 'HK2', 'HMGA2', 'HNF4A', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA1A', 'HSPA1B', 'HSPA2', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'ID1', 'ID4', 'IDH1', 'IDH2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL17A', 'IL21', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INPP4A', 'INPP4B', 'INPP5A', 'INPP5B', 'INPP5D', 'INPP5E', 'INPP5F', 'INPP5J', 'INPP5K', 'INPPL1', 'INSRR', 'INSR', 'INS', 'IPMK', 'IPO11', 'IQGAP1', 'IRAK1', 'IRS1', 'IRS2', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'ITPR3', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUN', 'KAT2B', 'KDM5B', 'KDM5C', 'KDM6A', 'KDR', 'KEAP1', 'ATG13', 'KIF11', 'KLLN', 'KITLG', 'KIT', 'KLF17', 'KLF2', 'KLF4', 'KLK3', 'KPNA1', 'KPNA2', 'KPNA5', 'KPNA6', 'KPNA7', 'KRAS', 'KRT14', 'KRT5', 'KRT8', 'LASP1', 'LATS1', 'LATS2', 'LCK', 'LDHA', 'LEF1', 'LEP', 'LGALS3', 'LIG4', 'LOX', 'LRIG1', 'LRP1B', 'LRRK2', 'LYN', 'LYPD1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAN2C1', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K3', 'MAP2K4', 'MAP2K7', 'MAP3K1', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK4', 'MAPK6', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAP1', 'MAPT', 'MARCH2', 'MARCH3', 'MAST1', 'MAST2', 'MAST3', 'MAST4', 'MATK', 'MCL1', 'MCM2', 'MCM7', 'MCRS1', 'MDK', 'MDM2', 'MDM4', 'MECOM', 'MECP2', 'MED12', 'MEN1', 'MET', 'MGMT', 'MINPP1', 'MITF', 'MKI67', 'MKRN1', 'MLH1', 'MLH3', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT1', 'MLST8', 'MME', 'MMP2', 'MMP9', 'MOV10', 'MRAP', 'MRE11A', 'MSH2', 'MSH6', 'MTDH', 'MTMR2', 'MTOR', 'MTSS1', 'MUTYH', 'MVP', 'MYCN', 'MYC', 'MYLK', 'MYOCD', 'NANOG', 'NCKAP1', 'NCOA3', 'NCOR2', 'NDFIP1', 'NDFIP2', 'NDRG1', 'NDRG2', 'NEDD4L', 'NEDD4', 'NES', 'NF1', 'NF2', 'NFATC1', 'NFATC4', 'NFE2L2', 'NFKBIA', 'NGFR', 'NKX3-1', 'NLGN3', 'NLGN4X', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR1H4', 'NR3C2', 'NRAS', 'NRP2', 'NTRK1', 'NTRK2', 'NUMB', 'OCRL', 'OLIG2', 'OTUD3', 'PALB2', 'PARD3', 'PARD6A', 'PARD6B', 'PARD6G', 'PARK2', 'PARK7', 'PARP1', 'PAX8', 'PBK', 'PBRM1', 'PCGF2', 'PCSK9', 'PDCD1', 'PDCD4', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PDK1', 'PDK2', 'PDPK1', 'PDZK1', 'PECAM1', 'PGM3', 'PGR', 'PHF6', 'PHLPP1', 'PHLPP2', 'PI3', 'PI4K2A', 'PI4K2B', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIK3R5', 'PIKFYVE', 'PINK1', 'PIP4K2A', 'PIP4K2B', 'PIP4K2C', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PIP5KL1', 'PKM', 'PLCB1', 'PLCB2', 'PLCB3', 'PLCB4', 'PLCD1', 'PLCD3', 'PLCD4', 'PLCE1', 'PLCG1', 'PLCG2', 'PLCH1', 'PLCH2', 'PLCZ1', 'PLEKHA1', 'PLEK', 'PLK1', 'PLK2', 'PLK3', 'BPIFA1', 'PMAIP1', 'PML', 'PMPCA', 'PMS1', 'PMS2', 'POLE', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPM1D', 'PPP2R1A', 'PPP2R4', 'PPP2R5A', 'PPP2R5E', 'PPP3CA', 'PPP6C', 'PRDX1', 'PREX2', 'PRKAA1', 'PRKAA2', 'PRKCI', 'PRKCZ', 'PRKDC', 'PRMT5', 'PROM1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTER', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPMT1', 'PTPN11', 'PTPN12', 'PTPN13', 'PTPN1', 'PTPRC', 'PTPRD', 'PTS', 'PXN', 'RAB7A', 'RAC1', 'RAC2', 'RAD51C', 'RAD51D', 'RAD51', 'RAD52', 'RAF1', 'RASA1', 'RASSF1', 'RB1CC1', 'RB1', 'RBL1', 'RBL2', 'RBM38', 'RBFOX2', 'RCN1', 'RECK', 'RELA', 'REL', 'REM1', 'RETN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'DROSHA', 'RNF146', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KB1', 'RPS6KB2', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'RRM1', 'RSL1D1', 'RUNX3', 'RWDD3', 'SACM1L', 'SALL4', 'SCAI', 'SCGB1D4', 'SCRIB', 'SDHB', 'SDHC', 'SERPINA1', 'SERPINA4', 'SERPINB5', 'SESN1', 'SESN2', 'SETD2', 'SGK1', 'SGK2', 'SGK3', 'SHANK2', 'SHARPIN', 'SHC1', 'SHFM1', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT5', 'SIRT6', 'SIRT7', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC2A4', 'SLC34A2', 'SLC9A3R1', 'SLC9A3R2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNCA', 'SNX27', 'SOCS1', 'SOCS3', 'SOD2', 'SOS1', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPOP', 'SPRY1', 'SPRY2', 'SRBD1', 'SRC', 'SREBF1', 'SRF', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STMN1', 'STUB1', 'STX16', 'SUCLG2', 'SUMO1', 'SYK', 'SYNJ1', 'SYNJ2', 'TACSTD2', 'TBX1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TEP1', 'TERT', 'TET1', 'TGFB1', 'TGFBR1', 'TGFBR2', 'TGM2', 'THBS1', 'TIMP1', 'TIMP3', 'TJP1', 'TLR4', 'TMEM55A', 'TMEM55B', 'TMPRSS2', 'TNFRSF10B', 'TNFSF10', 'TNF', 'TNKS2', 'TNKS', 'TNPO2', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TPM1', 'TRAF6', 'TRIM27', 'TRIM29', 'TSC1', 'TSC2', 'TTN', 'TUT1', 'TWIST1', 'TWSG1', 'TXN', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2E1', 'UBE2I', 'UBE2L3', 'UBE3A', 'ULK1', 'ULK2', 'USP10', 'USP13', 'USP18', 'USP28', 'USP7', 'USP8', 'UTF1', 'UVRAG', 'VCL', 'VDR', 'VEGFA', 'VHL', 'WDR18', 'WDTC1', 'WEE1', 'WIPI1', 'WIPI2', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT9A', 'WNT9B', 'WT1', 'WWP1', 'WWP2', 'XIAP', 'XPO1', 'XPO5', 'YAP1', 'YES1', 'YWHAB', 'YWHAZ', 'YY1', 'ZEB1', 'ZEB2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 2.97727547903179e-15 NRMSE: 4.655266170012962e-16 MAPE: 5.633052071312205e-12 Pearson Correlation: 0.06116703501168145 Spearman Correlation: 0.04180567749487855 Coefficient of Determination: -3.800809743864744 RMSE: 1.1210200749863422 NRMSE: 0.3759793651014027 MAPE: 2202.4235618987864 Predictor: ElasticNet Pearson Correlation: 0.831638530882456 Spearman Correlation: 0.7989063942814224 Coefficient of Determination: 0.6520978795607286 RMSE: 0.3679076623118051 NRMSE: 0.05752602021918616 MAPE: 254.01338888461947 Pearson Correlation: 0.32024701273475237 Spearman Correlation: 0.28293824992683647 Coefficient of Determination: -0.005882147831303142 RMSE: 0.5131327012529696 NRMSE: 0.17209977906257368 MAPE: 597.155254120342 Predictor: RandomForests Pearson Correlation: 0.5923384886626772 Spearman Correlation: 0.5372839462573086 Coefficient of Determination: 0.30702419690994753 RMSE: 0.5192414215132102 NRMSE: 0.08118855781615357 MAPE: 252.1519350856801 Pearson Correlation: 0.31672049556530973 Spearman Correlation: 0.34155614845859655 Coefficient of Determination: 0.0874892282862324 RMSE: 0.4887369139265927 NRMSE: 0.16391766632901553 MAPE: 493.99105733534475 Protein: BRCA2 Protein Interaction Partners Count: 361 x_train_column_count: 351 x_train columns: ['ABL1', 'ACHE', 'ADRB1', 'ADRB2', 'AKT1', 'ALK', 'APEX1', 'ARID1A', 'ARPC1A', 'AR', 'ATAD5', 'ATM', 'ATRIP', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'B3GALTL', 'BACH1', 'BARD1', 'BCCIP', 'BCHE', 'BDNF', 'BECN1', 'BIRC5', 'BLM', 'BMI1', 'BRCA1', 'BRCC3', 'BRE', 'BRIP1', 'SLX4', 'BUB1B', 'BUB1', 'BUB3', 'SFR1', 'RHNO1', 'RMI2', 'BABAM1', 'MMS22L', 'CASC1', 'CASC5', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCNE1', 'CDC25A', 'CDC25C', 'CDC45', 'CDC6', 'CDH1', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CENPE', 'CENPF', 'CEP55', 'CHEK1', 'CHEK2', 'CHRNA1', 'CLSPN', 'CNTROB', 'CREM', 'CSMD3', 'CTNNB1', 'CYP19A1', 'DMC1', 'DNA2', 'DSN1', 'DYNC1LI2', 'EGFR', 'EGF', 'ELAC2', 'EME1', 'EME2', 'ENAM', 'EPCAM', 'ERBB2', 'ERBB3', 'ERCC1', 'ERCC2', 'ERCC4', 'ERCC5', 'ERCC6', 'ERCC8', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM175A', 'FANCA', 'FANCB', 'FANCC', 'FANCD2', 'FANCE', 'FANCF', 'FANCG', 'FANCI', 'FANCL', 'FANCM', 'FBN1', 'FBXO18', 'FBXW7', 'FEN1', 'FGFR2', 'FHIT', 'FLNA', 'FOXM1', 'GAPDH', 'GEN1', 'SLX1B', 'H2AFX', 'HELQ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HMG20A', 'HMG20B', 'HMMR', 'HNRNPC', 'HOXB13', 'HRAS', 'HUS1', 'ITPKB', 'KAT2B', 'KAT5', 'KEAP1', 'SPIDR', 'KIF23', 'KIF4A', 'KIT', 'KLK3', 'KRAS', 'KRT5', 'LIG1', 'LIG3', 'LIG4', 'LIMD1', 'LSP1', 'MAD2L2', 'MAGED1', 'MAMSTR', 'MAP2K2', 'MAP3K1', 'MCM10', 'MCPH1', 'MDC1', 'MDM2', 'MDM4', 'MEN1', 'MGMT', 'MKI67', 'MLH1', 'MLH3', 'KMT2C', 'MND1', 'MORF4L1', 'MRE11A', 'MRPL36', 'MSH2', 'MSH3', 'MSH4', 'MSH5', 'MSH6', 'MTA2', 'FAN1', 'MUC1', 'MUS81', 'MUTYH', 'MYC', 'NBN', 'NCAPG', 'NEDD4', 'NF1', 'NHEJ1', 'NNT', 'NOTCH1', 'NSL1', 'NSMCE4A', 'OBFC1', 'OGG1', 'PALB2', 'PARG', 'PARP1', 'PARP2', 'PARP3', 'PAXIP1', 'PCNA', 'PDLIM7', 'PDS5A', 'PDS5B', 'PGR', 'PIK3CA', 'PLCB4', 'PLEC', 'PLEKHH1', 'PLK1', 'PMS1', 'PMS2', 'PNOC', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'POLN', 'POLQ', 'PRDM9', 'PRKDC', 'PRSS1', 'PSMC3IP', 'PSMD3', 'PSMD6', 'PTEN', 'RAD17', 'RAD18', 'RAD1', 'RAD21', 'RAD23B', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD52', 'RAD54B', 'RAD54L', 'RAD9A', 'RAD9B', 'RAG2', 'RASSF1', 'RBBP8', 'RBMX', 'RECQL4', 'RECQL5', 'RECQL', 'RET', 'REV1', 'REV3L', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RNF168', 'RNF8', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SKP2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCAL1', 'SMARCB1', 'SMC1A', 'SMC2', 'SMC3', 'SMC4', 'SMC5', 'SMC6', 'SMUG1', 'SNAI2', 'SP1', 'SPO11', 'STAT5A', 'STK11', 'STRA13', 'SUV39H1', 'SYCP3', 'TBCE', 'TDP1', 'TERT', 'TEX15', 'TMPRSS2', 'TNS1', 'TOP1', 'TOP2A', 'TOP3A', 'TOP3B', 'TOPBP1', 'TOX3', 'TP53BP1', 'TP53', 'TPX2', 'TRIP12', 'PRSS58', 'TTK', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2D1', 'UBE2E2', 'UBE2E3', 'UBE2N', 'UBE2T', 'UIMC1', 'USF1', 'USP11', 'USP15', 'USP1', 'USP21', 'USP4', 'UVRAG', 'VEGFA', 'VWF', 'WDR48', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WTIP', 'XPA', 'XPO1', 'XRCC1', 'XRCC2', 'XRCC3', 'XRCC4', 'XRCC5', 'XRCC6', 'ZFYVE26', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.8345098307368034 Spearman Correlation: 0.8116168222988233 Coefficient of Determination: 0.6964066575963686 RMSE: 0.10762238460599496 NRMSE: 0.06933315162248026 MAPE: 286.85544453645565 Pearson Correlation: -0.03689063032778444 Spearman Correlation: -0.04530777485123403 Coefficient of Determination: -2.744486588498342 RMSE: 0.3738313634864556 NRMSE: 0.2530452664512706 MAPE: 899.6639137226032 Predictor: ElasticNet Pearson Correlation: 0.49761844747640877 Spearman Correlation: 0.46887151557673923 Coefficient of Determination: 0.20934267371400728 RMSE: 0.1736803311584746 NRMSE: 0.11188940644772079 MAPE: 185.31249959807076 Pearson Correlation: 0.3170542511667001 Spearman Correlation: 0.3203638669398108 Coefficient of Determination: 0.08423205855827853 RMSE: 0.18487249952422607 NRMSE: 0.1251396096499943 MAPE: 170.70292306276858 Predictor: RandomForests Pearson Correlation: 0.5785687737545514 Spearman Correlation: 0.5134262809924671 Coefficient of Determination: 0.196163172604347 RMSE: 0.17512189109946347 NRMSE: 0.11281809702010853 MAPE: 181.78134862320357 Pearson Correlation: 0.31303320234229776 Spearman Correlation: 0.31835430689688815 Coefficient of Determination: 0.06397658885597002 RMSE: 0.18690587408250395 NRMSE: 0.12651599445114087 MAPE: 128.41740179579563 Protein: CDKN2A Protein Interaction Partners Count: 612 x_train_column_count: 605 x_train columns: ['ABCC1', 'ABL1', 'ACAP1', 'ACAP2', 'ACP5', 'ACTA1', 'ACTB', 'ACTG1', 'ADAMTS9', 'ADAP1', 'AFP', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD12', 'ANXA5', 'AP3D1', 'AP3S1', 'AP3S2', 'APAF1', 'APBA1', 'APBA2', 'ARAP1', 'ARAP2', 'ARF1', 'ARF3', 'ARF4', 'ARF5', 'ARF6', 'ARFGAP1', 'ARFGAP3', 'ARFIP2', 'ARFRP1', 'ARID1A', 'ARID2', 'ARID5B', 'ARL10', 'ARL1', 'ARL2', 'ARL3', 'ARL4A', 'ARL5A', 'AR', 'ASAP1', 'ATM', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'AXIN1', 'BAP1', 'BCL2L11', 'BCL2L1', 'BCL6', 'BECN1', 'BIRC5', 'BMI1', 'BRAF', 'BRCA1', 'BRCA2', 'BUB1B', 'RGCC', 'C1QBP', 'RABL6', 'CACNA1G', 'CADM1', 'CAMK1D', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNL1', 'CD274', 'CD34', 'CD44', 'CDC123', 'CDC20', 'CDC25A', 'CDC25C', 'CDC42', 'CDC45', 'CDC5L', 'CDC6', 'CDC7', 'CDH13', 'CDH17', 'CDH1', 'CDH2', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5RAP3', 'CDK6', 'CDK7', 'CDKAL1', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDX2', 'CEACAM5', 'CEBPB', 'CEBPE', 'CHEK1', 'CHEK2', 'CHFR', 'CHKA', 'COMMD1', 'CRABP1', 'CREBBP', 'CSF1R', 'CSF1', 'CSF2', 'CTBP1', 'CTBP2', 'CTCF', 'CTLA4', 'CTNNB1', 'CTSK', 'CUL1', 'CUL3', 'CXCR4', 'CYCS', 'CYLD', 'CYTH1', 'CYTH2', 'CYTH3', 'DAB2IP', 'DAP', 'DAXX', 'DICER1', 'DIRAS3', 'DLEC1', 'DMTF1', 'DNAH3', 'DNMT1', 'DNMT3A', 'DNMT3B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EBF1', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EP300', 'EPCAM', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ETS1', 'ETV6', 'EWSR1', 'EZH1', 'EZH2', 'FAT1', 'FBXW7', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FKBP2', 'FLT3', 'FMN2', 'FN1', 'FOS', 'FOXA1', 'FOXM1', 'FOXN2', 'FOXO1', 'FOXO3', 'FTO', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GATA4', 'GATA5', 'GBF1', 'GDF15', 'GGA1', 'GGA2', 'GGA3', 'GIT1', 'GIT2', 'GLI1', 'GLTSCR2', 'GMNN', 'GNA11', 'GNAQ', 'GNAS', 'GNL3', 'GOLPH3', 'GP5', 'GSPT1', 'GSTP1', 'H2AFX', 'H2AFZ', 'H3F3A', 'H3F3B', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC9', 'HELLS', 'HGF', 'HHEX', 'HIC1', 'HIF1A', 'HIST1H2BA', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AA3', 'HIST2H2AC', 'HIST2H4A', 'HIST4H4', 'HLTF', 'HMGA2', 'HNF4A', 'HNRNPD', 'HOPX', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA4', 'HSPA9', 'HUWE1', 'ID1', 'IDH1', 'IDH2', 'IGF1R', 'IGF1', 'IGF2BP2', 'IGF2R', 'IGF2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING4', 'INS', 'IQSEC1', 'IRS1', 'ISOC2', 'ITGAM', 'JAK1', 'JAK2', 'JAK3', 'JAZF1', 'JUNB', 'JUN', 'KAT2B', 'KAT5', 'KCNJ11', 'KCNQ1', 'KDM1A', 'KDM2B', 'KDM6A', 'KDM6B', 'KDR', 'KEAP1', 'KIAA1549', 'KIT', 'KLF4', 'KRAS', 'KRT19', 'KRT20', 'KRT5', 'KRT7', 'LATS2', 'LOX', 'LRRK2', 'MACROD2', 'MAF', 'MAP2K1', 'MAP2K4', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MAX', 'MC1R', 'MCL1', 'MCM10', 'MCM2', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEN1', 'MEOX1', 'MEOX2', 'MET', 'MGMT', 'MITF', 'MKRN1', 'MLANA', 'MLH1', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT3', 'MME', 'MMP2', 'MMP7', 'MMP9', 'MOV10', 'MRAS', 'MSH2', 'MSH6', 'MTA1', 'MTAP', 'MTHFR', 'MTNR1B', 'MTOR', 'MUC1', 'MYBL2', 'MYCL', 'MYCN', 'MYC', 'MYOD1', 'KAT6A', 'NANOG', 'NCAM1', 'NCL', 'NCOR1', 'NES', 'NEUROG1', 'NF1', 'NF2', 'NFATC1', 'NFE2L2', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NPM1', 'NRAS', 'NSUN2', 'ORC4', 'ORC5', 'OSBP2', 'P2RY8', 'PA2G4', 'PALB2', 'PARP1', 'PAX3', 'PAX5', 'PAX8', 'PBRM1', 'PCGF2', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PEX19', 'PGR', 'PHLDB1', 'PI3', 'PIAS2', 'PIGF', 'PIK3CA', 'PIK3R1', 'PIP4K2A', 'PLEKHA3', 'PLEKHA8', 'PLEK', 'PLK1', 'PMAIP1', 'PML', 'PMS2', 'POTEF', 'POU5F1', 'PPARA', 'PPARG', 'PPM1D', 'PPP1R9B', 'PPP3CA', 'PRDM2', 'PRMT6', 'PROM1', 'PRSS1', 'PSMC3', 'PSMD10', 'PSME3', 'PTCH1', 'PTEN', 'PTER', 'PTF1A', 'PTGS2', 'PTPN11', 'PTPRC', 'PTPRD', 'PXN', 'RAB11A', 'RAB5A', 'RABEP1', 'RABGEF1', 'RAC2', 'RAD51', 'RAF1', 'RAP2B', 'RARB', 'RASSF1', 'RASSF2', 'RB1', 'RBL1', 'RBL2', 'RCC1', 'RELA', 'RELB', 'REL', 'RET', 'RHOA', 'DROSHA', 'RNF2', 'RNF43', 'ROS1', 'RPL11', 'RPRM', 'RPS27A', 'RPS6KB1', 'RRAS2', 'RRAS', 'RTEL1', 'RUNX2', 'RUNX3', 'SDHC', 'SENP1', 'SENP3', 'SERPINE1', 'SERTAD1', 'SETD2', 'SFN', 'SFRP1', 'SFRP2', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SIX2', 'SKP2', 'SLC30A8', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SNAI1', 'SNAI2', 'SNCA', 'SOCS1', 'SOX2', 'SP1', 'SPEN', 'SRC', 'STAT1', 'STAT3', 'STK11', 'STK25', 'STK33', 'STMN1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUV39H1', 'SUZ12', 'SYNE1', 'SYP', 'TBL1XR1', 'TBRG1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TERT', 'TET2', 'TFDP1', 'TFPI2', 'TGFBR2', 'THADA', 'THBS1', 'TIMP3', 'TMCO1', 'TMEM115', 'TNFRSF10B', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TRADD', 'TRIM28', 'TRIP12', 'PRSS58', 'TSC2', 'TSPAN8', 'TTF1', 'TWIST1', 'TWSG1', 'TYR', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2I', 'UBE3A', 'UCHL1', 'USP7', 'UTF1', 'VEGFA', 'VHL', 'WDTC1', 'WEE1', 'WFS1', 'WHSC1', 'WIF1', 'WRN', 'WT1', 'WWOX', 'XRCC1', 'YY1', 'ZBTB17', 'ZBTB7A', 'ZEB1', 'ZFP91', 'ZNF148', 'ZNF217', 'ZNF227', 'ZNF410', 'ZNF420', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 3.761324021495167e-15 NRMSE: 8.503049669933687e-16 MAPE: 2.7764907156542493e-12 Pearson Correlation: 0.1876604329693777 Spearman Correlation: 0.22666569115208277 Coefficient of Determination: -8.257555576892694 RMSE: 2.049000735586254 NRMSE: 0.553544611947875 MAPE: 3102.4164932942685 Predictor: ElasticNet Pearson Correlation: 0.8379828944670129 Spearman Correlation: 0.8127374952613311 Coefficient of Determination: 0.6775996828732127 RMSE: 0.37664932408484464 NRMSE: 0.08514735482872038 MAPE: 202.67406272501623 Pearson Correlation: 0.642254526745567 Spearman Correlation: 0.5295922349039118 Coefficient of Determination: 0.40489794176407845 RMSE: 0.5195049338352552 NRMSE: 0.14034604869117548 MAPE: 267.7065430560214 Predictor: RandomForests Pearson Correlation: 0.6662250351297693 Spearman Correlation: 0.6056399506504265 Coefficient of Determination: 0.4270984004578826 RMSE: 0.5020875813412392 NRMSE: 0.11350459621142514 MAPE: 162.86817303453486 Pearson Correlation: 0.7130276466122182 Spearman Correlation: 0.6239098624524437 Coefficient of Determination: 0.4680405453297999 RMSE: 0.4911715647647899 NRMSE: 0.13269169136718983 MAPE: 142.80948292933763 Protein: TP53 Protein Interaction Partners Count: 1000 x_train_column_count: 991 x_train columns: ['ABCB1', 'ABCC1', 'ABL1', 'ACTB', 'ACTL6A', 'ADAM17', 'AFP', 'AGT', 'AICDA', 'AIFM2', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD2', 'ANXA1', 'ANXA2', 'ANXA5', 'APAF1', 'APBB1', 'APC', 'APEX1', 'APOBEC3B', 'APP', 'ARID1A', 'ARID3A', 'AR', 'ASF1A', 'ASXL1', 'ATF2', 'ATF3', 'ATG7', 'ATM', 'ATN1', 'ATRIP', 'ATRX', 'ATR', 'ATXN3', 'AURKA', 'AURKB', 'AXIN1', 'AXL', 'BACE1', 'BAG1', 'BAG2', 'BAIAP2L1', 'BAK1', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2A1', 'BCL2L11', 'BCL2L12', 'BCL2L14', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BID', 'BIRC3', 'BIRC5', 'BIRC6', 'BLM', 'BMF', 'BMI1', 'BMX', 'BNIP3L', 'BNIP3', 'BRCA1', 'BRCA2', 'BRCC3', 'BRD1', 'BRD4', 'BRD7', 'BRE', 'BRIP1', 'BRPF1', 'BRPF3', 'BTG2', 'BTK', 'BUB1B', 'BUB1', 'RHNO1', 'RGCC', 'RMI2', 'CNOT11', 'SETD9', 'CA9', 'CABIN1', 'CABLES1', 'CAPN1', 'CARM1', 'CASP10', 'CASP1', 'CASP2', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBX2', 'CBX4', 'CBX6', 'CBX8', 'CCDC106', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNG2', 'CCNH', 'CCNK', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CD24', 'CD274', 'CD34', 'CD40LG', 'CD40', 'CD44', 'CD82', 'CDC20', 'CDC25A', 'CDC25C', 'CDH17', 'CDH1', 'CDK12', 'CDK13', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CEACAM5', 'CEBPB', 'CENPJ', 'CFL1', 'CFLAR', 'CHD3', 'CHD4', 'CHD8', 'CHEK1', 'CHEK2', 'CHUK', 'CISH', 'CITED2', 'CLSPN', 'CLU', 'CNOT10', 'CNOT1', 'CNOT2', 'CNOT3', 'CNOT4', 'CNOT6L', 'CNOT6', 'CNOT7', 'CNOT8', 'COPS5', 'CREB1', 'CREBBP', 'CRYAB', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK1G1', 'CSNK1G2', 'CSNK1G3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTCF', 'CTGF', 'CTNNB1', 'CUL4A', 'CUL7', 'CUL9', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP1A1', 'DACH1', 'DAPK1', 'DAP', 'DAXX', 'DDB1', 'DDB2', 'DDIT4', 'DDX17', 'DDX3X', 'DDX5', 'DECR1', 'DGCR8', 'DHCR24', 'DHFR', 'DIABLO', 'DICER1', 'DKK1', 'DMTF1', 'DNA2', 'DNAJA3', 'DNAJB1', 'DNMT1', 'DNMT3A', 'DNTT', 'DPYD', 'DRAM1', 'DTL', 'DUSP1', 'DUSP2', 'DYRK1A', 'DYRK2', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EEF1A1', 'EEF1A2', 'EGFR', 'EGF', 'EGR1', 'EHMT1', 'EHMT2', 'EI24', 'EIF2AK2', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4EBP1', 'ELANE', 'ELAVL1', 'ELL3', 'ELL', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHA3', 'EPHB2', 'ERBB2', 'ERBB4', 'ERCC1', 'ERCC2', 'ERCC3', 'ERCC6', 'ESR1', 'ETS1', 'ETS2', 'EWSR1', 'EXO1', 'EZH2', 'F2', 'FADD', 'AMER1', 'FAM175B', 'FANCC', 'FANCD2', 'FASLG', 'FAS', 'FBL', 'FBXO11', 'FBXO4', 'FBXW7', 'FGF1', 'FGF2', 'FGFR3', 'FHIT', 'FHL2', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FSCN1', 'FUT4', 'FZR1', 'G3BP1', 'G6PD', 'GADD45A', 'GADD45B', 'GADD45G', 'GAPDH', 'GATAD2A', 'GATAD2B', 'GDF15', 'GFI1', 'GLS2', 'GLTSCR2', 'GNL3', 'GRAMD4', 'GRB10', 'GRB14', 'GSK3B', 'GSTP1', 'GTF2H1', 'GTSE1', 'H1F0', 'H2AFX', 'HAMP', 'HCK', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC5', 'HDAC7', 'HDAC8', 'HDAC9', 'HERC5', 'HIC1', 'HIF1A', 'HIPK1', 'HIPK2', 'HIPK3', 'HIPK4', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HK2', 'HMGA1', 'HMGA2', 'HMGB1', 'HMGB2', 'HMMR', 'HMOX1', 'HNF4A', 'HNRNPK', 'HNRNPL', 'HOXA5', 'HPGDS', 'HRAS', 'HSF1', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA1A', 'HSPA1B', 'HSPA1L', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'HSPB1', 'HSPB2', 'HTT', 'HUS1', 'HUWE1', 'ICAM1', 'ID2', 'ID4', 'IDH1', 'IDH2', 'IFI16', 'IFNAR1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IGFBP7', 'IKBKB', 'IL17A', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING2', 'ING3', 'ING4', 'ING5', 'INSIG1', 'INS', 'IRF1', 'ISG15', 'ITPKB', 'JAG1', 'JAK2', 'JMY', 'JUN', 'KAT2A', 'KAT2B', 'KAT5', 'KDM1A', 'KDM6A', 'KDM6B', 'KDR', 'KHDRBS1', 'CCAR2', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KPNA2', 'KRAS', 'KRT14', 'KRT17', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'L3MBTL1', 'LAMA4', 'LEP', 'LGALS7B', 'LGALS7', 'LIF', 'LIG4', 'LIN28A', 'PIDD1', 'LRRK2', 'LYN', 'MAF1', 'MAF', 'MAGEA2', 'MAP1LC3B', 'MAP2K1', 'MAP2K3', 'MAP2K7', 'MAP3K1', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MBD3', 'MCL1', 'MCM7', 'MDC1', 'MDH1', 'MDM2', 'MDM4', 'MEAF6', 'MECOM', 'MELK', 'MET', 'MGMT', 'MIF', 'MKI67', 'MKRN1', 'MLH1', 'KMT2D', 'KMT2C', 'MMP13', 'MMP1', 'MMP2', 'MMP9', 'MOV10', 'MRE11A', 'MSH2', 'MSH6', 'MSX1', 'MT1A', 'MT2A', 'MTA1', 'MTA2', 'MTA3', 'MTOR', 'MUC1', 'MUTYH', 'MYBBP1A', 'MYB', 'MYCN', 'MYC', 'MYOCD', 'KAT8', 'KAT6A', 'NANOG', 'NBN', 'NCL', 'NCOA3', 'NCOR1', 'NCOR2', 'NDN', 'NDRG1', 'NEDD8', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFE2L2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NFKBIB', 'NFYA', 'NFYB', 'NFYC', 'NGFR', 'NKX2-1', 'NLK', 'NLRC4', 'NME1', 'NOC2L', 'NOS3', 'NOTCH1', 'NOTCH3', 'NOTCH4', 'NOX4', 'NPM1', 'NQO1', 'NR1I2', 'NR2E1', 'NR3C1', 'NR4A1', 'NR4A2', 'NRAS', 'NUAK1', 'NUMB', 'NUPR1', 'OGG1', 'OLIG2', 'OPN1SW', 'OSGIN1', 'OTUB1', 'OTUB2', 'OTUD5', 'PADI4', 'PALB2', 'PARK2', 'PARK7', 'PARP1', 'PATZ1', 'PAX2', 'PAX3', 'PAX8', 'PBK', 'PBRM1', 'PCBP4', 'PCNA', 'PDCD4', 'PDCD5', 'PDGFRA', 'PDGFRB', 'PDLIM7', 'PER2', 'PERP', 'PGR', 'PHB', 'PHC1', 'PHC2', 'PHC3', 'PHF20', 'PHGDH', 'PI3', 'PIAS1', 'PIAS2', 'PIAS4', 'PIK3CA', 'PIN1', 'PKM', 'PLAGL1', 'PLAU', 'PLK1', 'PLK2', 'PLK3', 'PLK4', 'PMAIP1', 'PML', 'PMS2', 'POLI', 'POLK', 'POU4F1', 'POU4F2', 'POU5F1', 'PPARGC1A', 'PPARG', 'PPIF', 'PPM1D', 'PPP1R13B', 'PPP1R13L', 'PPP1R15A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R4', 'PPP2R5C', 'PRDM1', 'PRDM2', 'PRDX1', 'PRELID1', 'PRIMA1', 'PRKAA1', 'PRKAA2', 'PRKAB1', 'PRKAB2', 'PRKAG1', 'PRKAG2', 'PRKAG3', 'PRKCA', 'PRKCD', 'PRKCZ', 'PRKD1', 'PRKDC', 'PRKG1', 'PRMT1', 'PRMT5', 'PROM1', 'PSEN1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTBP1', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2', 'PTTG1', 'RABGGTA', 'RABGGTB', 'RAD17', 'RAD1', 'RAD50', 'RAD51', 'RAD9A', 'RAD9B', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP4', 'RBBP6', 'RBBP7', 'RBBP8', 'RBL1', 'RBL2', 'RBM38', 'RBPJ', 'RCHY1', 'RCOR1', 'RECQL4', 'RELA', 'REM1', 'REST', 'RET', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RFFL', 'RFWD2', 'RING1', 'RMI1', 'DROSHA', 'RNF20', 'RNF2', 'RNF34', 'RNF43', 'ROCK1', 'RPA1', 'RPA2', 'RPA3', 'RPL11', 'RPL22', 'RPL26', 'RPL5', 'RPRM', 'RPS14', 'RPS19', 'RPS27A', 'RPS27L', 'RPS3', 'RPS6KB1', 'RQCD1', 'RRAD', 'RRM2B', 'RRM2', 'RUNX2', 'RUNX3', 'S100A2', 'S100A4', 'S100A6', 'S100B', 'SALL4', 'SCO2', 'SDHC', 'SENP1', 'SENP3', 'SERPINB5', 'SERPINE1', 'SESN1', 'SESN2', 'SESN3', 'SETD2', 'SETD7', 'SETD8', 'SETDB1', 'SFN', 'SRSF1', 'SGK1', 'SHFM1', 'SHH', 'SHISA5', 'SIK1', 'SIN3A', 'SIN3B', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SKP2', 'SLC2A14', 'SLC2A1', 'SLC2A2', 'SLC2A3', 'SLC6A6', 'SLMO1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMG1', 'SMG7', 'SMYD2', 'SNAI1', 'SNAI2', 'SOCS1', 'SOCS3', 'SOD2', 'SORT1', 'SOX2', 'SOX4', 'SP100', 'SP1', 'SP3', 'SP7', 'SPATA18', 'SPP1', 'SQSTM1', 'SRC', 'SREBF1', 'SREBF2', 'SSRP1', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STEAP3', 'STK11', 'STMN1', 'STUB1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUMO4', 'SUPT16H', 'SUV39H1', 'SUZ12', 'SYK', 'SYP', 'TADA3', 'TAF10', 'TAF11', 'TAF12', 'TAF13', 'TAF15', 'TAF1L', 'TAF1', 'TAF2', 'TAF3', 'TAF4B', 'TAF4', 'TAF5', 'TAF6', 'TAF7L', 'TAF7', 'TAF9B', 'TBPL1', 'TBPL2', 'TBP', 'TCHP', 'TCP1', 'TDG', 'TERT', 'TET2', 'TFAM', 'TFAP2A', 'TFAP2C', 'TFDP1', 'TFF1', 'TGFB1', 'TGM2', 'THBS1', 'TIMP3', 'TLR3', 'TLR9', 'TMEM219', 'TNFAIP3', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF10C', 'TNFRSF10D', 'TNF', 'TNK2', 'TNKS1BP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOE1', 'TOP1', 'TOP2A', 'TOP3A', 'TOPBP1', 'TOPORS', 'TP53AIP1', 'TP53BP1', 'TP53BP2', 'TP53I3', 'TP53INP1', 'TP53RK', 'TP63', 'TP73', 'TPT1', 'TPX2', 'TRAF6', 'TRIAP1', 'TRIM24', 'TRIM28', 'TRIM29', 'TRIM32', 'TRIM59', 'TRIM8', 'TRRAP', 'TSC2', 'TTC5', 'TTK', 'TWIST1', 'TWIST2', 'TXN', 'TYMS', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2D1', 'UBE2E1', 'UBE2I', 'UBE2K', 'UBE2N', 'UBE2Q1', 'UBE2S', 'UBE3A', 'UBN1', 'UCHL1', 'UHRF1', 'USF1', 'USP10', 'USP15', 'USP24', 'USP3', 'USP42', 'USP7', 'UTP14A', 'VEGFA', 'VHL', 'VPRBP', 'VRK1', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WWOX', 'XAF1', 'XIAP', 'XPA', 'XPO1', 'XRCC1', 'XRCC5', 'XRCC6', 'YBX1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'YY1', 'YY2', 'ZBTB33', 'ZBTB7A', 'ZEB1', 'ZEB2', 'ZKSCAN4', 'ZNF148', 'ZNF274', 'ZNF385A', 'ZNF420', 'ZNF668', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.8295510261524155e-15 NRMSE: 4.900364339500243e-16 MAPE: 2.714117300731331e-12 Pearson Correlation: 0.16388994588205827 Spearman Correlation: 0.09820017559262512 Coefficient of Determination: -1.3520182423972722 RMSE: 0.627842429694164 NRMSE: 0.20676516703249267 MAPE: 5665.032087178826 Predictor: ElasticNet Pearson Correlation: 0.8133622251742578 Spearman Correlation: 0.7378396137260291 Coefficient of Determination: 0.6264234691976223 RMSE: 0.2782971301514253 NRMSE: 0.07454054644473693 MAPE: 247.6077577265776 Pearson Correlation: 0.47787288003204564 Spearman Correlation: 0.4201785191688617 Coefficient of Determination: 0.20789143599043447 RMSE: 0.36435327161500924 NRMSE: 0.11999119763379194 MAPE: 1629.2559674292243 Predictor: RandomForests Pearson Correlation: 0.6760856663874204 Spearman Correlation: 0.5828389256744891 Coefficient of Determination: 0.3816544637315291 RMSE: 0.35804247493664515 NRMSE: 0.09589995311012325 MAPE: 342.13075090349093 Pearson Correlation: 0.6064388444662423 Spearman Correlation: 0.4688340241252622 Coefficient of Determination: 0.29913669860842074 RMSE: 0.3427259422941701 NRMSE: 0.11286874437482959 MAPE: 1906.2089208927212 Protein: CTNNB1 Protein Interaction Partners Count: 992 x_train_column_count: 984 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACAN', 'ACP1', 'ACTA1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTN4', 'ACVR1B', 'ACVR1', 'ADAM10', 'ADCY7', 'ADIPOQ', 'AES', 'AFP', 'AHI1', 'AHR', 'AHSA1', 'AJAP1', 'AK9', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'ALPL', 'AMHR2', 'AMH', 'ANXA5', 'AP1M1', 'APC2', 'APCS', 'APC', 'APH1A', 'APH1B', 'AQP1', 'ARHGAP10', 'ARHGAP21', 'ARHGAP32', 'ARHGEF4', 'ARID1A', 'ARID2', 'ARMC7', 'ARMC8', 'ARVCF', 'ARX', 'AR', 'ASCL1', 'ASF1A', 'ASH2L', 'ASIP', 'ATF4', 'ATM', 'AURKA', 'AXIN1', 'AXIN2', 'BAG3', 'BCAR1', 'BCL2L1', 'BCL3', 'BCL6', 'BCL9L', 'BCL9', 'BDNF', 'BGLAP', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BMPR1B', 'BNIP2', 'BRAF', 'BRCA1', 'BRCA2', 'BRMS1L', 'BTRC', 'HILPDA', 'AK8', 'CA2', 'CA9', 'CABLES1', 'CACYBP', 'CALM1', 'CALM3', 'CARM1', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBLL1', 'CBL', 'CBY1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CD24', 'CD34', 'CD40', 'CD44', 'CDC27', 'CDC42', 'CDC73', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH16', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH26', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDHR5', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK8', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDON', 'CDX1', 'CDX2', 'CEBPA', 'CHD8', 'CHRD', 'CHUK', 'CITED1', 'CKAP5', 'CLCA1', 'CLDN3', 'CLDN5', 'COL1A1', 'COPS3', 'COPS5', 'COPS6', 'CREB1', 'CREBBP', 'CRKL', 'CRK', 'CRP', 'CRYAB', 'CSNK1A1L', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK2A3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNAL1', 'CTNNBIP1', 'CTNND1', 'CTNND2', 'CTTN', 'CUL1', 'CUL4A', 'CUL4B', 'CXCR4', 'CXXC4', 'DAB2', 'DACT1', 'DACT2', 'DACT3', 'DCT', 'DCX', 'DDB1', 'DDX39A', 'DDX3X', 'DDX5', 'DHODH', 'DHX9', 'DKK1', 'DKK2', 'DKK3', 'DKK4', 'DLG1', 'DLG2', 'DLG4', 'DLG5', 'DLGAP1', 'DLL4', 'DLX1', 'DNM2', 'DNMT1', 'DPYD', 'DSC1', 'DSC2', 'DSC3', 'DSG1', 'DSG2', 'DSG3', 'DSG4', 'DSP', 'DUSP6', 'DVL1', 'DVL2', 'DVL3', 'E2F3', 'ECM1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'ELAVL1', 'EMD', 'ENAH', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHB2', 'EPHB3', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EXOC3', 'EXOC4', 'EYA4', 'EZH2', 'EZR', 'F2RL2', 'FAF1', 'AMER1', 'FANCA', 'FASLG', 'FAS', 'FAT1', 'FAT4', 'FBXW11', 'FBXW7', 'FERMT2', 'FER', 'FGF10', 'FGF13', 'FGF2', 'FGF3', 'FGF4', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FLT3', 'FMN1', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC2', 'FOXG1', 'FOXL1', 'FOXL2', 'FOXM1', 'FOXN3', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FRAT1', 'FRAT2', 'FRZB', 'FSCN1', 'FSTL1', 'FSTL3', 'FURIN', 'FUS', 'FXR1', 'FYN', 'FZD10', 'FZD1', 'FZD2', 'FZD3', 'FZD4', 'FZD5', 'FZD6', 'FZD7', 'FZD8', 'FZD9', 'GAPDH', 'GATA2', 'GATA4', 'GCG', 'GDF2', 'GDNF', 'GFRA1', 'GJA1', 'GLI1', 'GLI2', 'GLI3', 'GLIS2', 'GLUL', 'GNA11', 'GNA12', 'GNA13', 'GNAQ', 'GNAS', 'GPC3', 'GRIA2', 'GRIP1', 'GSK3A', 'GSK3B', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HAS2', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC7', 'HERC5', 'HES7', 'HGF', 'HGS', 'HHEX', 'HIC1', 'HIF1A', 'HINT1', 'HIPK2', 'HIST1H1C', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HMGB1', 'HNF1A', 'HNF4A', 'HNRNPA1', 'HNRNPA2B1', 'HNRNPK', 'HNRNPM', 'HOXA10', 'HOXB4', 'HPGD', 'HRAS', 'HSP90AB1', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPD1', 'HTRA1', 'HTT', 'HUWE1', 'IBSP', 'IDH1', 'IDH2', 'IFNB1', 'IFRD1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP4', 'IHH', 'IKBKB', 'IL6', 'CXCL8', 'ILK', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IRF3', 'ISG15', 'ISL1', 'ITGAE', 'ITGB1', 'ITGB7', 'ITK', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'AJUBA', 'JUN', 'JUP', 'KANK1', 'KAT2A', 'KAT2B', 'KAT5', 'KCNN1', 'KCTD1', 'KDM1A', 'KDR', 'KIF18B', 'KIF3A', 'KIF5B', 'KIFC3', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KRAS', 'KREMEN1', 'KRIT1', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LATS2', 'LDB1', 'LDHB', 'LDLR', 'LEF1', 'LEO1', 'LGR4', 'LGR5', 'LGR6', 'LHCGR', 'LHX8', 'LIF', 'LIMA1', 'LMNA', 'LMNB1', 'LOX', 'LRP4', 'LRP5L', 'LRP5', 'LRP6', 'LRRFIP1', 'LRRK2', 'LZTFL1', 'MACF1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8IP1', 'MAPK8', 'MAPK9', 'MDFIC', 'MDFI', 'MDK', 'MDM2', 'MED12', 'MED1', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'KMT2D', 'MLLT10', 'MLLT11', 'MLLT4', 'MLLT6', 'KMT2A', 'MME', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP25', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MRAP', 'MSH2', 'MSH6', 'MSN', 'MSX1', 'MSX2', 'MTDH', 'MTOR', 'MUC13', 'MUC1', 'MUTYH', 'MYCN', 'MYC', 'MYF5', 'MYO1D', 'MYO6', 'MYO7A', 'MYOD1', 'MYOG', 'NANOG', 'NCAM1', 'NCCRP1', 'NCOA2', 'NCSTN', 'NDP', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEURL2', 'NF1', 'NF2', 'NFAT5', 'NFKB1', 'NIT1', 'NKD1', 'NKX2-5', 'NLK', 'NME1', 'NOG', 'NONO', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR0B1', 'NR4A1', 'NR4A2', 'NR5A1', 'NR5A2', 'NRAS', 'NRIP1', 'NTRK1', 'NTRK2', 'NTRK3', 'NUDT5', 'NUMB', 'NUP153', 'NUTF2', 'OTX2', 'PAK1', 'PAK2', 'PAK3', 'PANK4', 'PARD3', 'PARD6A', 'PARK2', 'PARP1', 'PAX3', 'PAX6', 'PAX7', 'PAX8', 'PDGFRA', 'PDGFRB', 'PECAM1', 'PGK1', 'PGR', 'PHB', 'JADE1', 'PI3', 'PICK1', 'PIK3CA', 'PIK3R1', 'PIK3R2', 'PIN1', 'PIP5K1A', 'PIP5K1C', 'PITX2', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAG1', 'PLEKHA7', 'PLK1', 'PML', 'PMS2', 'POLE', 'PORCN', 'POTEF', 'POU5F1', 'PPARD', 'PPARG', 'PPM1A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R2B', 'PPP2R5A', 'PPP2R5B', 'PPP2R5C', 'PPP2R5D', 'PPP2R5E', 'PRKACA', 'PRKACB', 'PRKACG', 'PRKAR1A', 'PRKCA', 'PRKCG', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRL', 'PRMT1', 'PROC', 'PROM1', 'PROP1', 'PSEN1', 'PSEN2', 'PSENEN', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTEN', 'PTGES3', 'PTGS2', 'PTH1R', 'PTH', 'PTK2', 'PTK7', 'PTMA', 'PTN', 'PTPN11', 'PTPN13', 'PTPN1', 'PTPN6', 'PTPRB', 'PTPRC', 'PTPRF', 'PTPRG', 'PTPRJ', 'PTPRK', 'PTPRM', 'PTPRU', 'PTPRZ1', 'PVRL1', 'PVRL2', 'PXN', 'PYGO1', 'PYGO2', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RALGDS', 'RANBP3', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RAPGEF2', 'RAPGEF6', 'RAPSN', 'RARA', 'RARB', 'RARG', 'RARS', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP5', 'RBMX', 'RBPJ', 'RBX1', 'RELA', 'REM1', 'RET', 'RHOA', 'RIPK2', 'RNF220', 'RNF43', 'ROBO1', 'ROCK1', 'ROCK2', 'ROR2', 'RPRD1A', 'RPS27A', 'RPSA', 'RSPO1', 'RSPO2', 'RSPO3', 'RSPO4', 'RUNX2', 'RUNX3', 'RUVBL1', 'RUVBL2', 'RXRA', 'RYK', 'S100A4', 'S100A6', 'SALL1', 'SALL4', 'SATB1', 'SCRIB', 'SDHC', 'SERPINE1', 'SETD2', 'SETD7', 'SFN', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHFM1', 'SHH', 'SIAH1', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT6', 'SKP1', 'SLC6A3', 'SLC9A3R1', 'SLCO1B3', 'SLCO2A1', 'SLIT1', 'SLK', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD5', 'SMAD7', 'SMAD9', 'SMARCA2', 'SMARCA4', 'SMARCA5', 'SMARCB1', 'SMO', 'SMURF1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNX1', 'SOST', 'SOX10', 'SOX13', 'SOX17', 'SOX1', 'SOX2', 'SOX3', 'SOX4', 'SOX6', 'SOX7', 'SOX8', 'SOX9', 'SP1', 'SP7', 'SPAG9', 'SPATA13', 'SPEN', 'SPN', 'SPP1', 'SRC', 'STAT3', 'STK11', 'STRAP', 'STX4', 'SUFU', 'SUV39H1', 'SYP', 'TADA3', 'TAX1BP3', 'TAZ', 'TBL1XR1', 'TBL1X', 'TBX5', 'TBX6', 'TCF12', 'TCF3', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TFAP2A', 'TFCP2', 'TFF1', 'TFF2', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBR1', 'TGFBR2', 'TGM2', 'TJP1', 'TJP2', 'TLE1', 'TLE2', 'TLE3', 'TLE4', 'TNFRSF11B', 'TNFSF11', 'TNF', 'TNIK', 'TNKS2', 'TNKS', 'TNS1', 'TOB1', 'TOP2A', 'TP53', 'TRAF4', 'TRIM33', 'TRIM37', 'TRIP10', 'TRRAP', 'TSC2', 'TUBA1A', 'TWIST1', 'TYMS', 'T', 'UBA52', 'UBB', 'UBC', 'UBE2B', 'UBE2R2', 'UBE3A', 'UBR5', 'UCHL1', 'UMPS', 'UPRT', 'USP4', 'USP7', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VAV2', 'VAV3', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VHL', 'VIM', 'WDR64', 'WDTC1', 'WHSC1', 'WIF1', 'WISP1', 'WLS', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'WWTR1', 'XPO1', 'YAP1', 'YARS', 'YEATS4', 'YES1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'ZAP70', 'ZAR1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZIC3', 'ZNRF3', 'ZYX', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 2.781854385332733e-15 NRMSE: 5.471782819301206e-16 MAPE: 2.881282836698056e-12 Pearson Correlation: 0.29218453498022434 Spearman Correlation: 0.37351477904594677 Coefficient of Determination: -1.8342143388305687 RMSE: 1.2904699052876454 NRMSE: 0.32116420827944686 MAPE: 312.72578982996583 Predictor: ElasticNet Pearson Correlation: 0.8739886732721954 Spearman Correlation: 0.8525379457257345 Coefficient of Determination: 0.7343149105471595 RMSE: 0.3736902489239382 NRMSE: 0.07350319609046779 MAPE: 335.61697141315506 Pearson Correlation: 0.5173706788070638 Spearman Correlation: 0.5275436542776316 Coefficient of Determination: 0.19887981559807233 RMSE: 0.6860888674853364 NRMSE: 0.17074957504425883 MAPE: 206.92188080090767 Predictor: RandomForests Pearson Correlation: 0.6752394208716751 Spearman Correlation: 0.6306516450727567 Coefficient of Determination: 0.4446434237391931 RMSE: 0.5402740818718719 NRMSE: 0.10626948895984892 MAPE: 418.6490648898317 Pearson Correlation: 0.5555587642331372 Spearman Correlation: 0.5261633011413521 Coefficient of Determination: 0.26095443840487087 RMSE: 0.6589722737741187 NRMSE: 0.16400096408106288 MAPE: 185.54982769552925 Protein: CCNE1 Protein Interaction Partners Count: 350 x_train_column_count: 347 x_train columns: ['ABL1', 'AKT1', 'AKT2', 'AKT3', 'ALDH18A1', 'ANAPC10', 'ANAPC13', 'ANAPC1', 'ANAPC2', 'ANAPC4', 'ANAPC5', 'ANAPC7', 'ANXA5', 'ARID1A', 'AR', 'ATM', 'AURKA', 'AURKB', 'BARD1', 'BCL2L1', 'BIRC5', 'BRCA1', 'BRCA2', 'BTG2', 'BTRC', 'BUB1B', 'BUB1', 'BUB3', 'RGCC', 'MLIP', 'CABLES1', 'CALM1', 'CAPRIN1', 'CASP3', 'CASP9', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNF', 'CCNG1', 'CCNH', 'CCNK', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CDC16', 'CDC20', 'CDC23', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC26', 'CDC27', 'CDC45', 'CDC6', 'CDC7', 'CDCA2', 'CDCA5', 'CDCA8', 'CDH1', 'CDK12', 'CDK13', 'CDK14', 'CDK15', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CENPA', 'CENPE', 'CHAF1A', 'CHD1L', 'CHEK1', 'CHEK2', 'CINP', 'CKS1B', 'CKS2', 'COPS5', 'CREBBP', 'CSK', 'CTNNB1', 'CUL1', 'CUL3', 'CUL4B', 'DBF4B', 'DBF4', 'DGCR8', 'DICER1', 'DTL', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'EBNA1BP2', 'ECT2', 'EGFR', 'EGF', 'ELAVL1', 'ELSPBP1', 'EP400', 'ERBB2', 'ERBB3', 'ERBB4', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM58A', 'FAM83H', 'FBXO5', 'FBXW7', 'FEN1', 'FGFR1', 'FGFR2', 'FGFR3', 'FOXM1', 'FZR1', 'GAPDH', 'GLI1', 'GMNN', 'GSK3B', 'H1F0', 'HDAC1', 'HEATR3', 'HERC5', 'HIST1H1A', 'HIST1H1B', 'HIST1H4A', 'HRAS', 'IFNAR1', 'IGF1R', 'IGF1', 'ITPKB', 'JUN', 'KIF11', 'KIF20A', 'KIF23', 'KIF2C', 'KPNA2', 'KRAS', 'LATS2', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'GMNC', 'MAD2L1', 'MAPK3', 'MATK', 'MAX', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDM2', 'MEGF11', 'MELK', 'MKI67', 'KMT2D', 'KMT2B', 'MNAT1', 'MRE11A', 'MTOR', 'MYBL2', 'MYC', 'NBN', 'NF1', 'NFYB', 'NMI', 'NOTCH1', 'NOTCH3', 'NPAT', 'NRAS', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PARK2', 'PARP1', 'PCBP4', 'PCNA', 'PIK3CA', 'PIK3R1', 'PKMYT1', 'PLK1', 'PLK4', 'POLA1', 'POLD1', 'PPP1R1C', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R4', 'PRC1', 'PRKAR1A', 'PRKAR2A', 'PRMT5', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB10', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSMF1', 'PTEN', 'PTGDR', 'PTK6', 'PTTG1', 'RAD51', 'RAD54L', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RBX1', 'REL', 'REM1', 'RHOA', 'RHOBTB3', 'RINT1', 'RNASE1', 'RPRD1A', 'RPS27A', 'RRM1', 'RRM2', 'RRN3', 'RSF1', 'SHFM1', 'SKP1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'ST8SIA1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STK3', 'STK4', 'TARBP1', 'TCP1', 'TERF1', 'TERT', 'TFDP1', 'TK1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TPX2', 'TTK', 'TUBG1', 'TYMS', 'UBA52', 'UBB', 'UBC', 'UBE2C', 'UBE2QL1', 'UBE2S', 'UHRF2', 'WEE1', 'WEE2', 'XIAP', 'YAP1', 'ZNF217', 'ZNF33A', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.9601705041265893 Spearman Correlation: 0.8730487935079695 Coefficient of Determination: 0.9219273969947087 RMSE: 0.14328301370685326 NRMSE: 0.03457852009239406 MAPE: 34.50111316465704 Pearson Correlation: 0.5651131566021921 Spearman Correlation: 0.41849575651155985 Coefficient of Determination: -1.5978149933863226 RMSE: 0.6741620141325243 NRMSE: 0.3663943902589277 MAPE: 80.27247289098814 Predictor: ElasticNet Pearson Correlation: 0.8929064439023274 Spearman Correlation: 0.7418576019921473 Coefficient of Determination: 0.7895050882676893 RMSE: 0.23526979765315387 NRMSE: 0.05677771017524287 MAPE: 63.183649695031086 Pearson Correlation: 0.8172582343327132 Spearman Correlation: 0.6983172373426983 Coefficient of Determination: 0.6598583730461413 RMSE: 0.24394395534102703 NRMSE: 0.1325789571361948 MAPE: 39.73264662516376 Predictor: RandomForests Pearson Correlation: 0.8617928485205313 Spearman Correlation: 0.7113946304957038 Coefficient of Determination: 0.7370044408538277 RMSE: 0.26297810132597776 NRMSE: 0.06346456097834731 MAPE: 68.09589031787966 Pearson Correlation: 0.834994290849563 Spearman Correlation: 0.7370695400035787 Coefficient of Determination: 0.694368986127278 RMSE: 0.23123782722461025 NRMSE: 0.12567341519497946 MAPE: 40.89069492026417 Protein: CCND1 Protein Interaction Partners Count: 857 x_train_column_count: 849 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTL6B', 'AFP', 'AHR', 'AKAP12', 'AKAP8', 'AKR1B10', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDOA', 'ALK', 'ANO1', 'ANXA5', 'APAF1', 'APC', 'APEX1', 'AREG', 'ARHGEF2', 'ARID1A', 'ARID1B', 'ARID2', 'ARID4A', 'AR', 'ASIP', 'ATF2', 'ATF3', 'ATF4', 'ATM', 'ATXN1', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'B2M', 'BANP', 'BARX2', 'BAX', 'BCAR1', 'BCAR3', 'BCCIP', 'BCL2A1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL3', 'BCL6', 'BCL9', 'BECN1', 'BGLAP', 'BHLHE40', 'BIRC2', 'BIRC3', 'BIRC5', 'BMI1', 'BMP4', 'BMP6', 'BRAF', 'BRCA1', 'BRCA2', 'BRD2', 'BRD4', 'BTC', 'BTG2', 'BTRC', 'RGCC', 'COPRS', 'CA9', 'CARD11', 'CARM1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBFB', 'CCDC62', 'CCL2', 'CCL5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNC', 'CCND2', 'CCND3', 'CCNDBP1', 'CCNE1', 'CCNE2', 'CCNG2', 'CCNH', 'CCNK', 'CCNL1', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CD19', 'CD22', 'CD24', 'CD34', 'CD38', 'CD44', 'CD5', 'CD79A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC6', 'CDC73', 'CDCA7L', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK12', 'CDK13', 'CDK14', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK20', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CDX2', 'CENPE', 'CEP57', 'CFLAR', 'CHEK1', 'CHEK2', 'CHKA', 'CHUK', 'CKS1B', 'CKS2', 'CLCN3', 'COL1A1', 'CR2', 'CREB1', 'CREBBP', 'CRKL', 'CRYAB', 'CSF2', 'CTBP1', 'CTGF', 'CTNNB1', 'CTNND1', 'CTTN', 'CUL1', 'CUL3', 'CUL7', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'CYR61', 'DACH1', 'DAXX', 'DDIT3', 'DDX53', 'DECR1', 'DHFR', 'DICER1', 'DKK1', 'DKK3', 'DLL1', 'DMTF1', 'DND1', 'DNMT1', 'DNMT3A', 'DNTT', 'DVL1', 'DVL2', 'DYRK1A', 'DYRK1B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EDN1', 'EEF1A1', 'EGFR', 'EGF', 'EGLN2', 'EGR1', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF3I', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4E', 'EIF4G1', 'ELAVL1', 'ELSPBP1', 'EP300', 'EPCAM', 'EPHA2', 'EPHA7', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EWSR1', 'EYA1', 'EZH2', 'FABP4', 'FADD', 'FAM58A', 'FAM83H', 'FASLG', 'FAT1', 'FBXO31', 'FBXO4', 'FBXW7', 'FBXW8', 'FGF13', 'FGF19', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FHL2', 'FIGF', 'FLCN', 'FLNA', 'FLT1', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXC1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FRZB', 'FSTL3', 'FZD1', 'FZD2', 'FZD7', 'FZD9', 'FZR1', 'GADD45A', 'GAL', 'GAPDH', 'GAST', 'GATA3', 'GATA4', 'GDF15', 'GDF2', 'GGNBP2', 'GGT1', 'GIT1', 'GJA1', 'GJB1', 'GLI1', 'GLI2', 'GLI3', 'GLTSCR2', 'GNB2L1', 'GPER1', 'GRB2', 'GREB1', 'GRM4', 'GRP', 'GSK3B', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HBEGF', 'HBZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC4', 'HEXIM1', 'HEY1', 'HGF', 'HIF1A', 'HIST1H2AA', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AH', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AC', 'HIST2H2BE', 'HIST2H4A', 'HIST4H4', 'HMGA2', 'HMOX1', 'HNF1A', 'HNF4A', 'HNRNPD', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB8', 'ICAM1', 'ID1', 'ID2', 'IFNAR1', 'IFNB1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP3', 'IGFBP5', 'IHH', 'IKBKB', 'IL10', 'IL17A', 'IL2', 'IL4', 'IL6', 'IL7', 'CXCL8', 'ILK', 'INSM1', 'INS', 'IRF1', 'IRS1', 'ISG15', 'ITGB1', 'ITPKB', 'ITPKC', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUNB', 'JUND', 'JUN', 'KAT2A', 'KAT2B', 'KDM1A', 'KDM5B', 'KDR', 'KHDRBS1', 'KIF18B', 'KIN', 'KITLG', 'KIT', 'KLF13', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KRAS', 'KRT10', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LDB3', 'LEF1', 'LEP', 'LGALS3', 'LGR5', 'LIMK2', 'LIMS1', 'LIN28B', 'LMNA', 'LMNB1', 'LOX', 'LRP5', 'LRP6', 'LYN', 'MAFB', 'MAF', 'MAML1', 'MAML2', 'MAML3', 'MAMLD1', 'MAP2K1', 'MAP2K2', 'MAP2K4', 'MAP2K7', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDK', 'MDM2', 'MDM4', 'MEN1', 'MET', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'MLXIPL', 'MME', 'MMP11', 'MMP14', 'MMP15', 'MMP1', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MNAT1', 'MOV10', 'MSH2', 'MST1', 'MTOR', 'MUC1', 'MYBL2', 'MYB', 'MYCN', 'MYC', 'MYEOV', 'MYF5', 'MYOD1', 'MYOG', 'NACA2', 'NADSYN1', 'NANOG', 'NCAM1', 'NCOA1', 'NCOA3', 'NCOR1', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NGF', 'NKX2-1', 'NME1-NME2', 'NME1', 'NME2', 'NMI', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NQO1', 'NR0B2', 'NR1H3', 'NR2E1', 'NR3C1', 'NR4A3', 'NRAS', 'NRF1', 'NUDT21', 'ODC1', 'ORAI1', 'ORAOV1', 'ORC4', 'PAK1', 'PAK4', 'PARK2', 'PARP1', 'PAX2', 'PAX5', 'PAX6', 'PBRM1', 'PBX3', 'PCNA', 'PDCD4', 'PDGFRA', 'PDGFRB', 'PDZK1', 'PECAM1', 'PELP1', 'PGR', 'PI3', 'PI4K2A', 'PIK3CA', 'PIK3R1', 'PKLR', 'PKM', 'PLAUR', 'PLAU', 'PLK1', 'PMAIP1', 'POLR2A', 'POTEF', 'POU2F1', 'POU5F1', 'PPARG', 'PPP2R4', 'PRDM5', 'PRKACA', 'PRL', 'PRMT5', 'PRNP', 'PROM1', 'PSAT1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTCHD3', 'PTEN', 'PTF1A', 'PTGS2', 'PTHLH', 'PTH', 'PTK2', 'PTK6', 'PTPN11', 'PTPRCAP', 'PTPRC', 'PXN', 'RAD51', 'RAF1', 'RALA', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RBX1', 'RCC1', 'RELA', 'RELB', 'REL', 'REM1', 'RET', 'RHEB', 'RHOA', 'RHOC', 'RICTOR', 'RNASE1', 'DROSHA', 'RND3', 'RNMT', 'ROCK1', 'RPRD1B', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KA6', 'RPS6KB1', 'RPS6', 'RPTOR', 'RREB1', 'RSF1', 'RUNX1', 'RUNX2', 'RUNX3', 'SDC1', 'SDHC', 'SENP1', 'SERPINE1', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHC1', 'SHFM1', 'SHH', 'SIRT1', 'SIX1', 'SIX3', 'SKP1', 'SKP2', 'SLC25A16', 'SLC25A6', 'SLC2A1', 'SLC35B2', 'SLC39A4', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMO', 'SNAI1', 'SNAI2', 'SNCA', 'SNIP1', 'SNW1', 'SNX33', 'SOCS3', 'SOX11', 'SOX17', 'SOX2', 'SOX4', 'SOX6', 'SOX9', 'SP1', 'SPN', 'SPP1', 'SPRY1', 'SRC', 'SREBF1', 'STAT1', 'STAT3', 'STAT4', 'STAT5A', 'STAT5B', 'STAT6', 'STC2', 'STIM1', 'STK11', 'STK24', 'STMN1', 'SUFU', 'SULF2', 'SUV39H1', 'TAF1', 'TBP', 'TBX2', 'TCEAL7', 'TCF4', 'TCF7L2', 'TCF7', 'TERT', 'TET3', 'TFDP1', 'TFF1', 'TGFA', 'TGFB1', 'TGFBR2', 'THBS1', 'THRA', 'THRB', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLR9', 'TM4SF1', 'TMPRSS4', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF8', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP2A', 'TP53', 'TP63', 'TP73', 'TRPV2', 'TSC22D3', 'TSC2', 'TWIST1', 'TXN', 'TYMS', 'UBA52', 'UBA7', 'UBB', 'UBC', 'UBE2C', 'UBTF', 'URGCP', 'USP18', 'USP2', 'USP9X', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VIP', 'VRK1', 'WDR77', 'WDTC1', 'WEE1', 'WHSC1', 'WIF1', 'WISP1', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'XBP1', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YY1', 'ZBTB17', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 7.934146226259125e-16 NRMSE: 4.769779265765186e-16 MAPE: 2.557785159579415e-12 Pearson Correlation: -0.015544452115651336 Spearman Correlation: 0.056653009462491466 Coefficient of Determination: -2.9938173135982034 RMSE: 0.4704952029726948 NRMSE: 0.3640026017923306 MAPE: 943.2345382893864 Predictor: ElasticNet Pearson Correlation: 0.6869017327375361 Spearman Correlation: 0.6589176062685732 Coefficient of Determination: 0.4279975551116195 RMSE: 0.18056410532207107 NRMSE: 0.10854991843435277 MAPE: 447.61557662370654 Pearson Correlation: 0.2150324086733396 Spearman Correlation: 0.2661837869476149 Coefficient of Determination: -0.006786409356128509 RMSE: 0.23622713040708807 NRMSE: 0.18275912174838158 MAPE: 381.53282193963867 Predictor: RandomForests Pearson Correlation: 0.5897287080039353 Spearman Correlation: 0.5843404797931906 Coefficient of Determination: 0.3083193710793459 RMSE: 0.1985570374413439 NRMSE: 0.11936674889164728 MAPE: 495.1329249851251 Pearson Correlation: 0.2704944937479533 Spearman Correlation: 0.42988001170617507 Coefficient of Determination: 0.057348461081726754 RMSE: 0.22857919168491403 NRMSE: 0.1768422291304961 MAPE: 299.0876241555505 Protein: ERBB2 Protein Interaction Partners Count: 663 x_train_column_count: 657 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACPP', 'ACTA2', 'ACTB', 'ACTG1', 'ADAM10', 'ADAM17', 'ADRB2', 'AFP', 'AGRN', 'AKT1S1', 'AKT1', 'AKT2', 'ALB', 'ALDH1A1', 'ALK', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'ANO1', 'ANXA2', 'ANXA5', 'AP2B1', 'APP', 'AREG', 'ARHGEF11', 'ARHGEF12', 'ARID1A', 'ARL6IP5', 'AR', 'ATM', 'ATP2B2', 'AURKB', 'AXIN1', 'BAG1', 'BARD1', 'BCAR1', 'BCAR3', 'BCAS1', 'BCL2L11', 'BCL2L1', 'BDNF', 'BECN1', 'BEST1', 'BIRC5', 'BLNK', 'BMI1', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BSG', 'BTC', 'MIEN1', 'CA9', 'CALU', 'CARTPT', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAV1', 'CBLB', 'CBLC', 'CBL', 'CCL27', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD19', 'CD22', 'CD247', 'CD24', 'CD274', 'CD28', 'CD33', 'CD34', 'CD44', 'CD46', 'CD52', 'CD68', 'CD6', 'CD80', 'CD82', 'CDC37', 'CDC42', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK4', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CEACAM5', 'CEP70', 'CHEK2', 'CHGA', 'CHKA', 'CHKB', 'CISH', 'CLDN3', 'CLDN4', 'CLDN7', 'CLTC', 'CNN1', 'COPS5', 'CPNE3', 'CREB1', 'CRKL', 'CRK', 'YBX3', 'CSF1', 'CSF2', 'CSF3', 'CSK', 'CSPG4', 'CTAG1B', 'CTLA4', 'CTNNB1', 'CTNND1', 'CTSB', 'CTSD', 'CTTN', 'CUL5', 'CXCL12', 'CXCR1', 'CXCR4', 'CYCS', 'CYP19A1', 'CYTIP', 'DCN', 'DDX41', 'DDX53', 'DHH', 'DIAPH1', 'DICER1', 'DLG4', 'DMTF1', 'DNAJA3', 'DNM2', 'DNMT1', 'DOCK1', 'DOCK7', 'DUSP6', 'E2F1', 'E2F3', 'EEA1', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EGFR', 'EGF', 'EIF3A', 'EIF4EBP1', 'EIF4E', 'ELAVL1', 'ELF3', 'EML4', 'ENO2', 'EP300', 'EPCAM', 'EPGN', 'EPHA2', 'EPS15', 'EPX', 'ERAL1', 'ERBB2IP', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ERRFI1', 'ESCO1', 'ESR1', 'ESR2', 'ESRRB', 'ETS1', 'ETS2', 'ETV4', 'ETV6', 'EZH2', 'EZR', 'FASLG', 'FASN', 'FBXW7', 'FCGR1A', 'FCGR1B', 'FCGRT', 'FGF10', 'FGF13', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FIGF', 'FLT1', 'FLT3LG', 'FN1', 'FOLH1', 'FOLR1', 'FOS', 'FOXA1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXP3', 'FREM2', 'FSIP1', 'FYN', 'GAB1', 'GABPB1', 'GAPDH', 'GATA3', 'GATA4', 'GDF2', 'GLI1', 'GLI2', 'GLS', 'GNA11', 'GNAQ', 'GNAS', 'GNRH1', 'GPER1', 'GRAP2', 'GRB2', 'GRB7', 'GSTP1', 'GZMB', 'H2AFX', 'H2AFY', 'HBEGF', 'HDAC1', 'HDAC6', 'HEATR6', 'HGF', 'HIF1A', 'HK1', 'HLA-A', 'HMGA2', 'HNF4A', 'HOXB7', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPG2', 'ICAM1', 'ID1', 'IDH1', 'IDH2', 'IFNG', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IHH', 'IL10', 'IL2', 'IL4', 'IL6R', 'IL6ST', 'IL6', 'CXCL8', 'ILK', 'INPP4B', 'INS', 'IQGAP1', 'IQSEC1', 'IRS1', 'ITGA5', 'ITGA6', 'ITGAV', 'ITGB1', 'ITGB3', 'ITGB4', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JUN', 'JUP', 'KDR', 'KITLG', 'KLK3', 'KLRK1', 'KRAS', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'L1CAM', 'LAMP1', 'LCN2', 'LDHA', 'LEP', 'LIN28A', 'LIN7A', 'LIN7B', 'LIN7C', 'LINGO1', 'LOX', 'LRIG1', 'LRPPRC', 'MAGEA1', 'MAGEA3', 'MAGED4B', 'MAGED4', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK8', 'MATK', 'MCL1', 'MDK', 'MDM2', 'MEMO1', 'MET', 'MGMT', 'MKI67', 'MLANA', 'MLH1', 'KMT2C', 'MME', 'MMP11', 'MMP14', 'MMP16', 'MMP1', 'MMP2', 'MMP7', 'MMP9', 'MPP1', 'MRAP', 'MRAS', 'MSH2', 'MSH6', 'MSLN', 'MTA1', 'MTOR', 'MUC13', 'MUC16', 'MUC1', 'MUC4', 'MUC6', 'MUCL1', 'MYBL2', 'MYCN', 'MYC', 'NANOG', 'NCAM1', 'NCL', 'NCOA1', 'NCOA3', 'NCOR1', 'NDRG1', 'NF1', 'NF2', 'NFE2L2', 'NGF', 'NISCH', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NR1H4', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NRP1', 'NTF3', 'NTF4', 'OPCML', 'OSMR', 'PA2G4', 'PADI2', 'PAK1', 'PALB2', 'PAQR3', 'PARP1', 'PAX2', 'PCSK9', 'PDCD1LG2', 'PDCD1', 'PDCD4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PDGFRA', 'PDPN', 'PECAM1', 'PELP1', 'PEPD', 'PFKFB3', 'PGAP3', 'PGF', 'PGR', 'PI3', 'PIK3C2A', 'PIK3C2B', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIN1', 'PIP', 'PLAUR', 'PLAU', 'PLCG1', 'PLCG2', 'PLEK', 'PLG', 'PLXNB1', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPP3CA', 'PRDM10', 'PRF1', 'PRKACA', 'PRL', 'PROM1', 'PSCA', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'PTPN1', 'PTPRC', 'PTPRO', 'PTPRU', 'PTS', 'PXN', 'RAB25', 'RAD51', 'RAF1', 'RANBP2', 'RARA', 'RASA1', 'RASA2', 'RASSF1', 'RB1', 'RBPJ', 'RDX', 'RECK', 'REM1', 'REN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'S100A14', 'SCGB2A2', 'SCUBE2', 'SDC1', 'SDHC', 'SEMA3D', 'SEMA4D', 'SERPINB5', 'SERPINE1', 'SFRP1', 'PEAK1', 'SH3BGRL3', 'SH3BGRL', 'SH3TC2', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SIAH2', 'PMEL', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC4A7', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SMUG1', 'SMYD3', 'SNAI1', 'SNAI2', 'SOCS1', 'SOS1', 'SOX10', 'SOX2', 'SOX9', 'SP3', 'SPP1', 'SPRY2', 'SRCIN1', 'SRC', 'STARD3', 'STAT1', 'STAT2', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STOM', 'STUB1', 'SYP', 'TAGLN', 'TBX1', 'TERT', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TFRC', 'TGFA', 'TGFB1', 'THBS1', 'THRA', 'TIMP1', 'TJP1', 'TMPRSS2', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF4', 'TNFRSF8', 'TNFRSF9', 'TNFSF11', 'TNF', 'TNS1', 'TNS3', 'TNS4', 'TOB1', 'TOP1', 'TOP2A', 'TP53', 'TP63', 'TSC2', 'TWIST1', 'TYMS', 'TYR', 'UBA52', 'UBB', 'UBC', 'USP2', 'USP9X', 'VAV1', 'VAV2', 'VAV3', 'VCL', 'VEGFA', 'VEGFB', 'VEGFC', 'VIM', 'WASL', 'WDFY2', 'WDTC1', 'WNT10A', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7B', 'WNT9A', 'WNT9B', 'WT1', 'WWOX', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YES1', 'YY1', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 4.484709860687348e-15 NRMSE: 8.048220412912708e-16 MAPE: 4.9938968907612555e-12 Pearson Correlation: 0.4400914141473065 Spearman Correlation: 0.2766071602770462 Coefficient of Determination: -1.5154084556972172 RMSE: 1.6767258878853997 NRMSE: 0.2856578509779716 MAPE: 3419.3821441618134 Predictor: ElasticNet Pearson Correlation: 0.9317186050740152 Spearman Correlation: 0.8733996748296616 Coefficient of Determination: 0.8624998298690992 RMSE: 0.364509616451386 NRMSE: 0.06541457144292052 MAPE: 172.57843021245154 Pearson Correlation: 0.828239756320518 Spearman Correlation: 0.5761437908496733 Coefficient of Determination: 0.6744918681663395 RMSE: 0.6031686110664249 NRMSE: 0.1027596999959836 MAPE: 613.097940384344 Predictor: RandomForests Pearson Correlation: 0.8552179643752656 Spearman Correlation: 0.7070736262574453 Coefficient of Determination: 0.7277264428403839 RMSE: 0.5129323675501023 NRMSE: 0.0920503862947261 MAPE: 255.91937889126447 Pearson Correlation: 0.7819357159654733 Spearman Correlation: 0.49868559632159526 Coefficient of Determination: 0.5924330275425123 RMSE: 0.6749277785461717 NRMSE: 0.11498505520659859 MAPE: 1549.7371408655852 Protein: ERBB3 Protein Interaction Partners Count: 245 x_train_column_count: 247 x_train columns: ['ADAM17', 'AGRN', 'AGTR2', 'AKT1', 'AKT2', 'AKT3', 'ALAS2', 'ALB', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'APIP', 'AREG', 'AR', 'BAMBI', 'BDNF', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BTC', 'CADM4', 'CASK', 'CASP3', 'CBLB', 'CBLC', 'CBL', 'CCND1', 'CCNE1', 'CD44', 'CD82', 'CDC42', 'CDH1', 'CDK4', 'CDK5', 'CDKN1B', 'CDKN2A', 'CLEC16A', 'COMMD5', 'COQ7', 'CRKL', 'CRK', 'CRYZL1', 'CSF1', 'CSK', 'CSPG5', 'CTNNB1', 'DCN', 'DHH', 'DOCK7', 'DUSP6', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EIF4EBP1', 'EIF4E', 'EML4', 'EPCAM', 'EPGN', 'EPN1', 'ERBB2IP', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'ESR2', 'FBXO9', 'FGF10', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FIGF', 'FKBP14', 'FLNA', 'FLT3LG', 'FN1', 'FOXA1', 'FOXO3', 'FREM2', 'FTSJ1', 'GAB1', 'GAPDH', 'GLE1', 'GRB2', 'GRB7', 'GRHL2', 'HBEGF', 'HGF', 'HGS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPG2', 'IGF1', 'IGF2', 'IL6ST', 'ILK', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'ITPKB', 'JAK1', 'JAK2', 'JUN', 'KDR', 'KITLG', 'KRAS', 'L1CAM', 'LAMA1', 'LAMB1', 'LAMC2', 'LIN7A', 'LIN7B', 'LIN7C', 'LRIG1', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARCH7', 'MDM2', 'MET', 'MITF', 'MMP9', 'MRPL49', 'MTOR', 'MUC1', 'MUC4', 'MYC', 'N4BP1', 'NDRG1', 'NEDD4L', 'NEDD4', 'NF1', 'NGF', 'NICN1', 'NOTCH1', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NTF3', 'NTF4', 'OAT', 'PA2G4', 'PARK7', 'PCSK9', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PGR', 'PI3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIP5K1C', 'PLCG1', 'PLCG2', 'PPP1R9A', 'PRKACA', 'PTEN', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN22', 'PTPN2', 'RASA1', 'RASA2', 'REM1', 'RGS4', 'RHOA', 'RHOC', 'RNF41', 'ROR1', 'RRAS2', 'SH2B3', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SLC25A16', 'SMAD4', 'SNAI2', 'SOS1', 'SOX10', 'SOX2', 'SPARC', 'SPRY2', 'SRC', 'STAT3', 'STAT5A', 'STAT5B', 'SYN3', 'TCF7L2', 'TGFA', 'TMEFF2', 'TNFRSF13C', 'TNS1', 'TP53', 'USP8', 'VAV1', 'VAV2', 'VAV3', 'VEGFA', 'VEGFB', 'VEGFC', 'WNT1', 'WNT5A', 'ZEB1', 'ZNF217', 'KRBOX4', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.7840835049604225 Spearman Correlation: 0.7768913942404723 Coefficient of Determination: 0.6147869427510211 RMSE: 0.27627421209242764 NRMSE: 0.07455848032568814 MAPE: 169.7089034866076 Pearson Correlation: 0.023749088782691063 Spearman Correlation: 0.1874646375963321 Coefficient of Determination: -3.082232561710672 RMSE: 1.0461413215332385 NRMSE: 0.38608841984700215 MAPE: 504.9456369949798 Predictor: ElasticNet Pearson Correlation: 0.6472969587637768 Spearman Correlation: 0.644294811053886 Coefficient of Determination: 0.3949984753525726 RMSE: 0.3462327010168699 NRMSE: 0.09343826856427657 MAPE: 173.0389462421782 Pearson Correlation: 0.369547315447735 Spearman Correlation: 0.4156618866452054 Coefficient of Determination: 0.1297542124399923 RMSE: 0.4830170378589614 NRMSE: 0.17826203885420355 MAPE: 345.01124698779574 Predictor: RandomForests Pearson Correlation: 0.5789425519444418 Spearman Correlation: 0.5770328254616109 Coefficient of Determination: 0.3094405582295372 RMSE: 0.3699051544179982 NRMSE: 0.09982678429942712 MAPE: 197.14907470637513 Pearson Correlation: 0.41826035781454896 Spearman Correlation: 0.4207737097294926 Coefficient of Determination: 0.16510252573364903 RMSE: 0.4731055676495301 NRMSE: 0.1746041163606044 MAPE: 362.5667723983798 Fold: 3 Protein: RB1 Protein Interaction Partners Count: 369 x_train_column_count: 366 x_train columns: ['AATF', 'ABCC1', 'ABL1', 'ACTL6A', 'ACTL6B', 'AFAP1', 'AHR', 'AKT1', 'ANXA5', 'ARID1A', 'ARID1B', 'ARID4A', 'ARMCX1', 'ARMCX2', 'ARMCX3', 'ARNT', 'AR', 'ASF1A', 'ATF2', 'ATM', 'AURKB', 'BCR', 'BDP1', 'BGLAP', 'BRCA1', 'BRF1', 'FAM208A', 'C4BPA', 'CABIN1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CBFB', 'CBX1', 'CBX4', 'CBX5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNT2', 'CDC25A', 'CDC27', 'CDC6', 'CDH1', 'CDK14', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPA', 'CEBPB', 'CEBPD', 'CEBPE', 'CHEK1', 'CHEK2', 'CLNK', 'COL1A1', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUX1', 'DCAF10', 'DGKZ', 'DNAJA3', 'DNMT1', 'DNMT3A', 'DUSP1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EGFR', 'EGF', 'EID1', 'EIF2AK1', 'EIF2AK4', 'AGO2', 'ELF1', 'ENC1', 'EP300', 'ERBB2', 'ESD', 'ESR1', 'ESR2', 'EZH2', 'FBXW7', 'FMO5', 'FOS', 'FOXM1', 'FRK', 'FZR1', 'G6PD', 'GAPDH', 'GATA1', 'GJA1', 'GNB2L1', 'GRB2', 'GSC', 'GTF2H1', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HARS2', 'HARS', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC8', 'HDC', 'HES1', 'HIF1A', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HIST4H4', 'HMGA1', 'HMGA2', 'HRAS', 'HSP90AA1', 'HSPA1A', 'HSPA8', 'ID2', 'IFI16', 'INS', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'KDM2A', 'KDM4A', 'KDM5A', 'KDM5B', 'PPP1R26', 'KIF11', 'KRAS', 'KRT10', 'KRT14', 'KRT5', 'L3MBTL2', 'L3MBTL1', 'LIMD1', 'LIN52', 'LIN54', 'LIN9', 'LMNA', 'LOR', 'LPAR6', 'MAF', 'MAP2K7', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEF2C', 'MORF4L1', 'MRFAP1', 'MRPL11', 'MRPS18B', 'MSH6', 'MTL5', 'MYBL2', 'MYC', 'MYOD1', 'NACC2', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NCR1', 'NDC80', 'NEO1', 'NFYA', 'NFYB', 'NFYC', 'NGF', 'NOTCH1', 'NPM1', 'NRAS', 'ORC1', 'PA2G4', 'PAX2', 'PAX3', 'PAX5', 'PAX6', 'PAX8', 'PCNA', 'PELP1', 'PGR', 'PHB', 'PHF21B', 'PIAS4', 'PIK3CA', 'PIK3R1', 'PIK3R3', 'PLK1', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPIA', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP1R3A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R3B', 'PPRC1', 'PRB1', 'PRB3', 'PRB4', 'PRDM2', 'PRH1', 'PRH2', 'PRIM1', 'PRIM2', 'PRKCB', 'PRMT2', 'PSMA7', 'PSMC1', 'PSMD10', 'PTEN', 'PTGDR', 'RAF1', 'RB1CC1', 'RBAK', 'RBBP4', 'RBBP5', 'RBBP6', 'RBBP7', 'RBBP8', 'RBBP9', 'RBL1', 'RBL2', 'RBFOX2', 'RFC1', 'RPS6KB1', 'RUNX2', 'S100A6', 'SETD1B', 'SETD7', 'SIRT1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMC1A', 'SMC2', 'SMC4', 'SMC5', 'SMYD2', 'SNW1', 'SP100', 'SP1', 'SP3', 'SPI1', 'STAM', 'STAT3', 'SUV39H1', 'SUV420H2', 'SUZ12', 'TAF1', 'TBP', 'TERT', 'TFAP2A', 'TFDP1', 'TFDP3', 'TGM2', 'THAP1', 'TMPO', 'TNS1', 'TOP2A', 'TP53BP1', 'TP53', 'TP73', 'TRDMT1', 'TRIM27', 'TTK', 'UBE2I', 'UBE3A', 'UBL4A', 'UBN1', 'UBR4', 'UBTF', 'UHRF1', 'USP4', 'USP7', 'VEGFA', 'VPS39', 'WDR59', 'WDR73', 'WEE1', 'WWTR1', 'YAP1', 'YY1', 'ZBTB16', 'ZBTB7A', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.816709781184388 Spearman Correlation: 0.7621012808770368 Coefficient of Determination: 0.6670148666822511 RMSE: 0.13882702274981798 NRMSE: 0.05077056127480178 MAPE: 290.71593769754304 Pearson Correlation: -0.0028448413857497584 Spearman Correlation: 0.060541902018728416 Coefficient of Determination: -3.802611352523824 RMSE: 0.48577592421217874 NRMSE: 0.3408618972256611 MAPE: 1264.838348371169 Predictor: ElasticNet Pearson Correlation: 0.5010497505421361 Spearman Correlation: 0.4933877036251411 Coefficient of Determination: 0.20599816978802854 RMSE: 0.2143741126190142 NRMSE: 0.07839895868161725 MAPE: 243.0014369452664 Pearson Correlation: 0.2086770016453385 Spearman Correlation: 0.2626092594670757 Coefficient of Determination: 0.006392694585068304 RMSE: 0.22095541691015977 NRMSE: 0.15504120080143688 MAPE: 294.7953705073042 Predictor: RandomForests Pearson Correlation: 0.603978591035249 Spearman Correlation: 0.4517173845774052 Coefficient of Determination: 0.1786302313719249 RMSE: 0.21803737508853988 NRMSE: 0.07973865385040224 MAPE: 207.6690163505581 Pearson Correlation: 0.05449791794910446 Spearman Correlation: 0.1794411401638425 Coefficient of Determination: -0.046015379501774145 RMSE: 0.22670771524017264 NRMSE: 0.15907750483473387 MAPE: 208.21191034649345 Protein: CDH1 Protein Interaction Partners Count: 834 x_train_column_count: 826 x_train columns: ['ABCB1', 'ABCG2', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTR3', 'ACVR1B', 'ADAM10', 'ADAM15', 'ADAM17', 'ADAM9', 'AFP', 'AIMP1', 'AJAP1', 'AKAP9', 'AKT1', 'AKT2', 'AKTIP', 'ALB', 'ALCAM', 'ALDH1A1', 'ALDH3A1', 'ALK', 'AMOTL2', 'ANAPC4', 'ANAPC7', 'ANO1', 'ANXA2', 'ANXA5', 'AP1M1', 'AP1M2', 'APC2', 'APC', 'AQP1', 'AQP5', 'AREG', 'ARF6', 'ARHGAP31', 'ARID1A', 'ARL2BP', 'ARMC7', 'ARPC1A', 'ARPC2', 'ARRB2', 'ARVCF', 'AR', 'CLMP', 'ASF1A', 'ATF2', 'ATF3', 'ATM', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BAG3', 'BANP', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL6B', 'BCL9L', 'BCORL1', 'BMI1', 'BMP2', 'BMP4', 'BMP6', 'BMP7', 'BNIP3', 'BRCA1', 'BRCA2', 'BSG', 'BTBD7', 'BTC', 'BTF3', 'ANAPC15', 'CA2', 'CA9', 'CALCA', 'CALR', 'CAPN1', 'CAPNS1', 'CASP3', 'CASP8', 'CASP9', 'CASS4', 'CAV1', 'CBLL1', 'CBL', 'CBX7', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CCR7', 'CD1A', 'CD1B', 'CD1C', 'CD1E', 'CD207', 'CD24', 'CD274', 'CD276', 'CD2AP', 'CD34', 'CD44', 'CD46', 'CD68', 'CD82', 'CDC16', 'CDC23', 'CDC27', 'CDC42', 'CDC6', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH24', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK14', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN3', 'CDX2', 'CEACAM5', 'CFL1', 'CGN', 'CHGA', 'CHL1', 'CLCA2', 'CLDN1', 'CLDN2', 'CLDN3', 'CLDN4', 'CLDN5', 'CLDN7', 'CNTN1', 'COL1A1', 'CORO1C', 'CRB3', 'CREB1', 'CREBBP', 'CRYAB', 'YBX3', 'CSDC2', 'CSE1L', 'CSF2', 'CSNK2A1', 'CSNK2A2', 'CST5', 'CTBP1', 'CTBP2', 'CTCF', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTSL', 'CTTN', 'CXCL12', 'CXCL1', 'CXCR4', 'CYP1B1', 'DAAM1', 'DAB2IP', 'DACH1', 'DAPK1', 'DAP', 'DDR1', 'DDR2', 'DDX3X', 'DICER1', 'DKK1', 'DLC1', 'DLG1', 'DLG5', 'DNM2', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOT1L', 'DPAGT1', 'DPEP1', 'DSP', 'DUOX1', 'DUSP4', 'DVL1', 'DVL2', 'E2F1', 'ECT2', 'EDN1', 'EFEMP1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'EHD1', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'ELAVL1', 'ELF3', 'ENAH', 'ENG', 'EP300', 'EPB41L3', 'EPCAM', 'EPHA10', 'EPHA1', 'EPHA2', 'EPPK1', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ESRP1', 'ESRP2', 'ETS1', 'ETS2', 'EXOC3', 'EXOC4', 'EYA2', 'EZH2', 'EZR', 'F11R', 'F2RL2', 'SUPT20H', 'FBXL5', 'FER', 'FGF10', 'FGF13', 'FGF17', 'FGF19', 'FGF2', 'FGF4', 'FGF5', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FMN1', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC1', 'FOXC2', 'FOXJ2', 'FOXK2', 'FOXL1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXQ1', 'FRMPD2', 'FSCN1', 'FUT4', 'FXYD5', 'FYN', 'FZD1', 'FZD4', 'FZD7', 'FZR1', 'G6PD', 'GAB2', 'GABPA', 'GADD45A', 'GAPDH', 'GAS6', 'GATA1', 'GATA3', 'GATA4', 'GATA6', 'GDNF', 'GFRA1', 'GGT1', 'GJA1', 'GJB1', 'GJB2', 'GKN2', 'GLI1', 'GLI2', 'GMNN', 'GNA12', 'GNA13', 'GNB2L1', 'GNL3', 'GPA33', 'GRB2', 'GRHL2', 'GRHL3', 'GSK3B', 'GSN', 'GSTP1', 'H2AFZ', 'HAVCR2', 'HBEGF', 'HDAC1', 'HDAC2', 'HEPACAM', 'HES1', 'HGF', 'HGS', 'HIF1A', 'HMGA2', 'HNF4A', 'HOXB4', 'HOXD10', 'HPGDS', 'HPGD', 'HRAS', 'HSP90AA1', 'HSPA5', 'ICAM1', 'ID1', 'ID2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP3', 'IL10', 'IL15', 'IL17A', 'IL1B', 'IL24', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IQSEC1', 'IRS1', 'IRS2', 'ITGA5', 'ITGA6', 'ITGAE', 'ITGAM', 'ITGB1', 'ITGB4', 'ITGB7', 'ITPKB', 'IVL', 'JAG1', 'JAK2', 'AJUBA', 'JUN', 'JUP', 'KDM1A', 'KDM6A', 'KDR', 'KEAP1', 'KIFC3', 'KIT', 'KLF4', 'KLF5', 'KLF8', 'KLK3', 'KLK7', 'KLRG1', 'KRAS', 'KRT10', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'KRT9', 'LAMA1', 'LAMB1', 'LAMC2', 'LASP1', 'LATS1', 'LATS2', 'LCN2', 'LEF1', 'LEP', 'LGALS3', 'LGALS4', 'LGALS9', 'LGR5', 'LIF', 'LIMA1', 'LIN28A', 'LIPG', 'LLGL2', 'LMNA', 'LOR', 'LOXL2', 'LOXL3', 'LOX', 'LRP5', 'LRP6', 'LY6K', 'MACC1', 'MACROD1', 'MAD2L2', 'MAGI1', 'MAP2K1', 'MAP2K7', 'MAP4K5', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARK2', 'MARVELD2', 'MCAM', 'MCL1', 'MDM2', 'MED1', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGAT5', 'MGMT', 'MKI67', 'MLH1', 'MLLT4', 'MME', 'MMP11', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP1', 'MMP25', 'MMP27', 'MMP2', 'MMP3', 'MMP7', 'MMP8', 'MMP9', 'MPP5', 'MRAP', 'MSH2', 'MSN', 'MT1G', 'MTA1', 'MTA3', 'MTBP', 'MTDH', 'MTOR', 'MUC1', 'MUC4', 'MYCN', 'MYC', 'MYH6', 'MYO6', 'MYO7A', 'NANOG', 'NCAM1', 'NCOA1', 'NCSTN', 'NDRG1', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEUROG3', 'NF2', 'NFE2L2', 'NFIC', 'NKD2', 'NKX2-1', 'NKX6-1', 'NKX6-2', 'NME1', 'NOG', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NR2F1', 'NRP2', 'NUDT21', 'NUMBL', 'NUMB', 'NUP98', 'NUTF2', 'OTUB1', 'OVOL1', 'OVOL2', 'PARD3', 'PARD6A', 'PAX2', 'PAX5', 'PAX6', 'PAX8', 'PCSK9', 'PDCD4', 'PDGFRB', 'PDPN', 'PEBP1', 'PECAM1', 'PGR', 'PHLPP1', 'PI3', 'PIK3CA', 'PIK3R1', 'PIP5K1A', 'PIP5K1C', 'PIP', 'PIR', 'PITX1', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAUR', 'PLAU', 'PLCD1', 'PLEKHA7', 'PLG', 'PODXL', 'POLR2C', 'POSTN', 'POTEF', 'POU5F1', 'PPARA', 'PPARGC1A', 'PPARG', 'PPL', 'PPP6C', 'PRAME', 'PRDM10', 'PRKAR1A', 'PRKCA', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRKG1', 'PRMT5', 'PROC', 'PROM1', 'PRSS8', 'PSEN1', 'PTCH1', 'PTEN', 'PTF1A', 'PTGS2', 'PTK2', 'PTPN11', 'PTPN14', 'PTPRC', 'PTPRF', 'PTPRJ', 'PTPRM', 'PTPRS', 'PTPRT', 'PTPRU', 'PTRH2', 'PVRL1', 'PVRL2', 'PVR', 'PXN', 'RAB11A', 'RAB25', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RACGAP1', 'RAF1', 'RALA', 'RALBP1', 'RALGDS', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RARB', 'RASSF1', 'RB1', 'RBM4', 'RCOR1', 'RDX', 'REM1', 'RET', 'RHOA', 'RHOB', 'RHOC', 'RHOD', 'RICTOR', 'RND3', 'ROCK1', 'ROCK2', 'RPS6KB1', 'RPTOR', 'RRM2', 'RUNX2', 'RUNX3', 'S100A14', 'S100A4', 'S100A8', 'SATB1', 'SCRIB', 'SDC1', 'SDC4', 'SDHC', 'SELE', 'SELL', 'SELP', 'SEMA3C', 'SEMA3F', 'SENP1', 'SERPINB4', 'SERPINB5', 'SERPINE1', 'SFN', 'SFRP1', 'SFRP2', 'SFTPC', 'SHH', 'SIK1', 'SIN3A', 'SIRT1', 'SIRT2', 'SIRT4', 'SIRT7', 'SIX1', 'SIX2', 'SKIL', 'SKP2', 'SLC2A1', 'SLC39A6', 'SLC6A3', 'SLC9A3R1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SNAI1', 'SNAI2', 'SNAI3', 'SNX16', 'SNX1', 'SOX10', 'SOX17', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPARC', 'SPDEF', 'SPINT1', 'SPP1', 'SPRY1', 'SRCIN1', 'SRC', 'SRXN1', 'ST14', 'ST7L', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STX4', 'STYK1', 'SUCLG2', 'SUMO1', 'SUZ12', 'SYNJ2', 'SYP', 'TACC3', 'TACSTD2', 'TATDN1', 'TBX1', 'TBX3', 'TCF15', 'TCF4', 'TDGF1', 'TERT', 'TET2', 'TFF1', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBI', 'TGFBR1', 'TGFBR2', 'THBS1', 'THEM4', 'THUMPD1', 'THY1', 'TIAM1', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLN1', 'TLR4', 'TMPRSS2', 'TMPRSS4', 'TNFRSF6B', 'TNF', 'TNK2', 'TNS1', 'TP53BP1', 'TP53BP2', 'TP53', 'TRIM21', 'TRIM29', 'TRIM44', 'TRIP10', 'TRPS1', 'TSPYL2', 'TWIST1', 'TWIST2', 'TYRP1', 'T', 'UBE2I', 'UBE2S', 'USP48', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VEZT', 'VHL', 'VIM', 'VIPAS39', 'VPS33B', 'VTN', 'WASL', 'WDFY2', 'WDTC1', 'WIF1', 'WISP1', 'WISP3', 'WNT10A', 'WNT10B', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT9A', 'WNT9B', 'WT1', 'XIAP', 'YAP1', 'YBX1', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.416020362607707e-15 NRMSE: 7.03165562021545e-16 MAPE: 5.35085952251677e-12 Pearson Correlation: 0.3162390988937354 Spearman Correlation: 0.27710320577563313 Coefficient of Determination: -3.1563547145658797 RMSE: 1.9195305132168634 NRMSE: 0.3773700533198725 MAPE: 814.3613133516176 Predictor: ElasticNet Pearson Correlation: 0.8976845961859835 Spearman Correlation: 0.8655434941463712 Coefficient of Determination: 0.7881979901400128 RMSE: 0.5406237464416848 NRMSE: 0.08608384230465346 MAPE: 329.7557043487172 Pearson Correlation: 0.5007775405844688 Spearman Correlation: 0.4769061958378533 Coefficient of Determination: 0.01049049895458587 RMSE: 0.9365882440125393 NRMSE: 0.18412854244732027 MAPE: 447.7291429674419 Predictor: RandomForests Pearson Correlation: 0.7633671154176777 Spearman Correlation: 0.723551063217177 Coefficient of Determination: 0.5780737897783512 RMSE: 0.7630418037263422 NRMSE: 0.12149960251685331 MAPE: 220.65995332046512 Pearson Correlation: 0.7452569666029282 Spearman Correlation: 0.525151186423771 Coefficient of Determination: 0.5414466304273828 RMSE: 0.6375784983506092 NRMSE: 0.12534472896445745 MAPE: 148.159970259313 Protein: CDH2 Protein Interaction Partners Count: 472 x_train_column_count: 467 x_train columns: ['ABCG2', 'ABL1', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTR3', 'ADAM10', 'ADH1A', 'AFP', 'AHSG', 'AKT1', 'AKT3', 'ALB', 'ALCAM', 'ALDH1A1', 'AMBN', 'AMELX', 'AMOTL1', 'AMTN', 'ANGPT1', 'ANO8', 'ANXA5', 'APC2', 'APC', 'APLP2', 'APOA1', 'APOA2', 'APOA5', 'APOB', 'APOE', 'APOL1', 'APPL1', 'APP', 'ARHGAP32', 'ARMC7', 'ARPC5', 'ARVCF', 'AR', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BCL2L1', 'BDNF', 'BMI1', 'BMP15', 'BMP2', 'BMP4', 'BMP7', 'BNIP2', 'BOC', 'BPIFB2', 'RGCC', 'GSKIP', 'C3', 'C4A', 'CABLES1', 'CADM1', 'CALU', 'CASP3', 'CAV1', 'CBLL1', 'CCNA2', 'CCNB1', 'CCND1', 'CD24', 'CD34', 'CD44', 'CD80', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK4', 'CDK5', 'CDK6', 'CDKN2A', 'CDON', 'CDX2', 'CEBPZ', 'CFL1', 'CHGB', 'CHL1', 'CHRDL1', 'CKAP4', 'CLDN11', 'CLDN3', 'CLDN4', 'CLDN7', 'CORT', 'CP', 'CREBBP', 'CRP', 'CSF1', 'CSK', 'CST3', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTTN', 'CXCL12', 'CXCR4', 'CYLD', 'CYR61', 'DBN1', 'DDR1', 'DDR2', 'DKK1', 'DLG4', 'DLG5', 'DMP1', 'DNAJC3', 'DSP', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EFNB2', 'EFNB3', 'EGFR', 'EGF', 'EHMT2', 'EIF2AK3', 'ENAM', 'ENG', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA4', 'EPHB2', 'EPS8', 'ERBB2', 'ERBB4', 'ESR1', 'ESRP1', 'EXOC4', 'EZH2', 'EZR', 'F11R', 'F5', 'EVA1A', 'FAM20A', 'FAM20C', 'FBN1', 'FER', 'FGA', 'FGF13', 'FGF23', 'FGF2', 'FGFR1', 'FGFR4', 'FGG', 'FN1', 'FOXC2', 'FOXD3', 'FOXO1', 'FOXP4', 'FSTL1', 'FSTL3', 'FUCA2', 'GAA', 'GAPDH', 'GAS6', 'GATA4', 'GFAP', 'GJA10', 'GJA1', 'GJA3', 'GJB6', 'GJC1', 'GJC3', 'GJD3', 'GJD4', 'GLI1', 'GOLM1', 'GPC3', 'GRIA1', 'GRIA2', 'HGF', 'HMGA2', 'HNF4A', 'HRAS', 'HRC', 'HSP90B1', 'HSPA5', 'IARS2', 'IGF1R', 'IGF1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL1B', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'INVS', 'IQGAP1', 'ISL1', 'ITGA6', 'ITGB1', 'ITIH2', 'ITPKB', 'JAG1', 'JAM3', 'JUN', 'JUP', 'KCNA5', 'KDR', 'KIAA2022', 'KIF5B', 'KIT', 'KLF4', 'KNG1', 'KRAS', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT8', 'KTN1', 'L1CAM', 'LAMB1', 'LAMB2', 'LAMC1', 'LEF1', 'LGALS1', 'LRP5', 'LRP6', 'LRRC7', 'LTBP1', 'LTBP3', 'MAP1B', 'MAP2K6', 'MAP2K7', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MATN3', 'MBTPS1', 'MCAM', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEPE', 'MET', 'MFGE8', 'MFI2', 'MGAT4A', 'MIA3', 'MKI67', 'MLLT4', 'MMP14', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MPDZ', 'MPP5', 'MRAP', 'MRPL49', 'MSLN', 'MSN', 'MTHFD1', 'MUC1', 'MUC4', 'MXRA8', 'MYC', 'MYO10', 'MZF1', 'NANOG', 'NCAM1', 'NCSTN', 'NDRG1', 'NENF', 'NES', 'NFASC', 'NGF', 'NKX2-5', 'NLGN1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTUM', 'NRCAM', 'NT5C', 'NT5E', 'NTRK2', 'NUCB1', 'NUMBL', 'NUMB', 'OLFM3', 'P4HB', 'PARD3', 'PAX6', 'PCSK9', 'PC', 'PDGFRB', 'PDIA4', 'PDIA6', 'PECAM1', 'PENK', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PITX2', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PNPLA2', 'POU5F1', 'PPT2', 'PRKCDBP', 'PRKCSH', 'PROC', 'PROM1', 'PRPH', 'PRSS23', 'PSEN1', 'PTEN', 'PTK2', 'PTPN11', 'PTPN1', 'PTPN2', 'PTPRC', 'PTPRS', 'PVRL1', 'PVRL2', 'PVRL3', 'PXN', 'QSOX1', 'RAB11FIP1', 'RAB3D', 'RAB5A', 'RAC1', 'RCN1', 'RELN', 'REM1', 'RHOA', 'RHOB', 'RHOC', 'ROBO1', 'PTBP3', 'RPS6KB1', 'RUNX2', 'S100A14', 'S100A4', 'SARS2', 'SCARB2', 'SCG2', 'SCG3', 'SDC2', 'SEMA3A', 'SENP3', 'SERPINA10', 'SERPINA1', 'SERPINC1', 'SERPIND1', 'SERPINE1', 'SHH', 'SHISA5', 'SIRT7', 'SKP1', 'SLC2A1', 'SLC9A3R1', 'SLIT1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SNAI1', 'SNAI2', 'SNAI3', 'SOX10', 'SOX18', 'SOX1', 'SOX2', 'SOX4', 'SOX9', 'SP7', 'SPAG9', 'SPARCL1', 'SPARC', 'SPP1', 'SPP2', 'SRC', 'ST6GALNAC5', 'STAT3', 'STC2', 'SYP', 'TBX1', 'TCF3', 'TEK', 'TF', 'TGFB1', 'TGFBR1', 'TGM2', 'TGOLN2', 'THY1', 'TIMP1', 'TJP1', 'TJP3', 'TMEM132A', 'TNC', 'TNF', 'TNNT1', 'TP53', 'TRPS1', 'TSC2', 'TWIST1', 'TWIST2', 'USP9X', 'VANGL2', 'VCAM1', 'VCAN', 'VCL', 'VEGFA', 'VGF', 'VIM', 'VTN', 'VWA1', 'WFS1', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7A', 'XIRP1', 'ZBTB16', 'ZEB1', 'ZEB2', 'ZSCAN1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.9320716417306635 Spearman Correlation: 0.9042049538965786 Coefficient of Determination: 0.8687575453184944 RMSE: 0.13811260505970954 NRMSE: 0.05004442534231088 MAPE: 1280.7725154582956 Pearson Correlation: -0.012778444132941397 Spearman Correlation: -0.045369643013005154 Coefficient of Determination: -17.33958180889693 RMSE: 1.4216889631293348 NRMSE: 0.7490931792997108 MAPE: 26039.657828232583 Predictor: ElasticNet Pearson Correlation: 0.6655108849076002 Spearman Correlation: 0.6311711210883145 Coefficient of Determination: 0.3984014955683406 RMSE: 0.2956987704072927 NRMSE: 0.10714499978523542 MAPE: 344.42335958749794 Pearson Correlation: -0.08145979702822685 Spearman Correlation: -0.06240227434257285 Coefficient of Determination: -0.23835145217208353 RMSE: 0.3694297249638596 NRMSE: 0.19465389011099735 MAPE: 535.3830978473856 Predictor: RandomForests Pearson Correlation: 0.5579621011437972 Spearman Correlation: 0.5029575426329222 Coefficient of Determination: 0.20818808047373372 RMSE: 0.3392400841050704 NRMSE: 0.12292198134106472 MAPE: 367.54582968003314 Pearson Correlation: 0.045047914510734866 Spearman Correlation: 0.027703587326525274 Coefficient of Determination: -0.019269445275922337 RMSE: 0.33516169684487046 NRMSE: 0.17659793919787894 MAPE: 1881.682439110728 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.5727097811799441 Spearman Correlation: 0.5792644266997269 Coefficient of Determination: 0.32799649345917925 RMSE: 0.1742073915858315 NRMSE: 0.12221992450035887 MAPE: 860.7578539003557 Pearson Correlation: 0.3078638378825443 Spearman Correlation: 0.3008441501764361 Coefficient of Determination: -0.03313055115945196 RMSE: 0.1914225605909612 NRMSE: 0.16650217940014195 MAPE: 244.5250349075852 Predictor: ElasticNet Pearson Correlation: 0.5103593066391751 Spearman Correlation: 0.531313386471416 Coefficient of Determination: 0.2406953114285656 RMSE: 0.18517776976972827 NRMSE: 0.12991649111082693 MAPE: 637.9292923620376 Pearson Correlation: 0.32624549225714594 Spearman Correlation: 0.3443409518821931 Coefficient of Determination: 0.09881825970951352 RMSE: 0.17878114354723315 NRMSE: 0.1555064875548924 MAPE: 169.64645122676743 Predictor: RandomForests Pearson Correlation: 0.5653902264193225 Spearman Correlation: 0.5647909017496053 Coefficient of Determination: 0.2839064224243535 RMSE: 0.17983147143600559 NRMSE: 0.1261656503872745 MAPE: 669.4133299085007 Pearson Correlation: 0.36166175579365273 Spearman Correlation: 0.3745059165326251 Coefficient of Determination: 0.12762128326974997 RMSE: 0.17590089529614486 NRMSE: 0.15300120495111194 MAPE: 201.7567420267845 Protein: PTEN Protein Interaction Partners Count: 884 x_train_column_count: 876 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ABTB1', 'ACTB', 'ACTG1', 'ADM', 'AEBP1', 'AFP', 'AKT1S1', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'AMHR2', 'ANXA2', 'ANXA5', 'APAF1', 'APC', 'ARAF', 'AREG', 'ARHGAP21', 'ARID1A', 'ARID2', 'ARL2BP', 'AR', 'ATF3', 'ATG12', 'ATG5', 'ATG7', 'ATM', 'ATRX', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'AXL', 'BAD', 'BAG5', 'BARD1', 'BAX', 'BBC3', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BIRC3', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BNIP3', 'BRAF', 'BRCA1', 'BRCA2', 'BRD4', 'BTG2', 'BTK', 'SPRTN', 'CLHC1', 'CA9', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBL', 'CBX7', 'CCL2', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD24', 'CD274', 'CD34', 'CD44', 'CD79A', 'CD79B', 'CDC14A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC7', 'CDH17', 'CDH1', 'CDH2', 'CDIPT', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CENPC', 'CFL1', 'CFLAR', 'CFTR', 'CHD1', 'CHD8', 'CHEK1', 'CHEK2', 'CHKA', 'CHORDC1', 'CHUK', 'CLTCL1', 'CLTC', 'CNOT6L', 'CREB1', 'CREBBP', 'CRP', 'CSF1R', 'CSF1', 'CSK', 'CSN2', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTGF', 'CTLA4', 'CTNNB1', 'CUL1', 'CUL3', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'DAPK1', 'DAXX', 'DBN1', 'DCAF13', 'DDIT4', 'DDR2', 'DECR1', 'DEPTOR', 'DGCR8', 'DICER1', 'DLC1', 'DLG1', 'DLG4', 'DNM1L', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOLPP1', 'DUSP1', 'DUSP6', 'DUT', 'DVL1', 'DYRK1A', 'E2F1', 'E2F2', 'E2F3', 'ECSCR', 'EGFR', 'EGF', 'EGR1', 'EIF2AK2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4EBP2', 'EIF4E', 'EIF4G1', 'EML4', 'ENDOG', 'EP300', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA3', 'EPHA4', 'EPHA5', 'EPHA7', 'EPHB1', 'EPHB2', 'EPHB3', 'EPHB4', 'ERBB2', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ESR1', 'ETS1', 'ETS2', 'ETV1', 'ETV6', 'EYA2', 'EZH2', 'EZR', 'FABP4', 'FASLG', 'FASN', 'FBXW7', 'FCGR1B', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FIG4', 'FKBP1A', 'FLCN', 'FLT1', 'FLT3', 'FLT4', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXG1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FOXP3', 'FRK', 'FYN', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GCK', 'GDF10', 'GDF2', 'GFAP', 'GJA1', 'GLI1', 'GNA11', 'GNAQ', 'GNAS', 'GNRHR', 'GRASP', 'GRB2', 'GRPR', 'GSK3A', 'GSK3B', 'GSTP1', 'H1F0', 'H2AFX', 'HAVCR2', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HES1', 'HGF', 'HIF1A', 'HIST1H2BA', 'HK1', 'HK2', 'HMGA2', 'HNF4A', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA1A', 'HSPA1B', 'HSPA2', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'ID1', 'ID4', 'IDH1', 'IDH2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL17A', 'IL21', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INPP4A', 'INPP4B', 'INPP5A', 'INPP5B', 'INPP5D', 'INPP5E', 'INPP5F', 'INPP5J', 'INPP5K', 'INPPL1', 'INSRR', 'INSR', 'INS', 'IPMK', 'IPO11', 'IQGAP1', 'IRAK1', 'IRS1', 'IRS2', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'ITPR3', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUN', 'KAT2B', 'KDM5B', 'KDM5C', 'KDM6A', 'KDR', 'KEAP1', 'ATG13', 'KIF11', 'KLLN', 'KITLG', 'KIT', 'KLF17', 'KLF2', 'KLF4', 'KLK3', 'KPNA1', 'KPNA2', 'KPNA5', 'KPNA6', 'KPNA7', 'KRAS', 'KRT14', 'KRT5', 'KRT8', 'LASP1', 'LATS1', 'LATS2', 'LCK', 'LDHA', 'LEF1', 'LEP', 'LGALS3', 'LIG4', 'LOX', 'LRIG1', 'LRP1B', 'LRRK2', 'LYN', 'LYPD1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAN2C1', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K3', 'MAP2K4', 'MAP2K7', 'MAP3K1', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK4', 'MAPK6', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAP1', 'MAPT', 'MARCH2', 'MARCH3', 'MAST1', 'MAST2', 'MAST3', 'MAST4', 'MATK', 'MCL1', 'MCM2', 'MCM7', 'MCRS1', 'MDK', 'MDM2', 'MDM4', 'MECOM', 'MECP2', 'MED12', 'MEN1', 'MET', 'MGMT', 'MINPP1', 'MITF', 'MKI67', 'MKRN1', 'MLH1', 'MLH3', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT1', 'MLST8', 'MME', 'MMP2', 'MMP9', 'MOV10', 'MRAP', 'MRE11A', 'MSH2', 'MSH6', 'MTDH', 'MTMR2', 'MTOR', 'MTSS1', 'MUTYH', 'MVP', 'MYCN', 'MYC', 'MYLK', 'MYOCD', 'NANOG', 'NCKAP1', 'NCOA3', 'NCOR2', 'NDFIP1', 'NDFIP2', 'NDRG1', 'NDRG2', 'NEDD4L', 'NEDD4', 'NES', 'NF1', 'NF2', 'NFATC1', 'NFATC4', 'NFE2L2', 'NFKBIA', 'NGFR', 'NKX3-1', 'NLGN3', 'NLGN4X', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR1H4', 'NR3C2', 'NRAS', 'NRP2', 'NTRK1', 'NTRK2', 'NUMB', 'OCRL', 'OLIG2', 'OTUD3', 'PALB2', 'PARD3', 'PARD6A', 'PARD6B', 'PARD6G', 'PARK2', 'PARK7', 'PARP1', 'PAX8', 'PBK', 'PBRM1', 'PCGF2', 'PCSK9', 'PDCD1', 'PDCD4', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PDK1', 'PDK2', 'PDPK1', 'PDZK1', 'PECAM1', 'PGM3', 'PGR', 'PHF6', 'PHLPP1', 'PHLPP2', 'PI3', 'PI4K2A', 'PI4K2B', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIK3R5', 'PIKFYVE', 'PINK1', 'PIP4K2A', 'PIP4K2B', 'PIP4K2C', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PIP5KL1', 'PKM', 'PLCB1', 'PLCB2', 'PLCB3', 'PLCB4', 'PLCD1', 'PLCD3', 'PLCD4', 'PLCE1', 'PLCG1', 'PLCG2', 'PLCH1', 'PLCH2', 'PLCZ1', 'PLEKHA1', 'PLEK', 'PLK1', 'PLK2', 'PLK3', 'BPIFA1', 'PMAIP1', 'PML', 'PMPCA', 'PMS1', 'PMS2', 'POLE', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPM1D', 'PPP2R1A', 'PPP2R4', 'PPP2R5A', 'PPP2R5E', 'PPP3CA', 'PPP6C', 'PRDX1', 'PREX2', 'PRKAA1', 'PRKAA2', 'PRKCI', 'PRKCZ', 'PRKDC', 'PRMT5', 'PROM1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTER', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPMT1', 'PTPN11', 'PTPN12', 'PTPN13', 'PTPN1', 'PTPRC', 'PTPRD', 'PTS', 'PXN', 'RAB7A', 'RAC1', 'RAC2', 'RAD51C', 'RAD51D', 'RAD51', 'RAD52', 'RAF1', 'RASA1', 'RASSF1', 'RB1CC1', 'RB1', 'RBL1', 'RBL2', 'RBM38', 'RBFOX2', 'RCN1', 'RECK', 'RELA', 'REL', 'REM1', 'RETN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'DROSHA', 'RNF146', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KB1', 'RPS6KB2', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'RRM1', 'RSL1D1', 'RUNX3', 'RWDD3', 'SACM1L', 'SALL4', 'SCAI', 'SCGB1D4', 'SCRIB', 'SDHB', 'SDHC', 'SERPINA1', 'SERPINA4', 'SERPINB5', 'SESN1', 'SESN2', 'SETD2', 'SGK1', 'SGK2', 'SGK3', 'SHANK2', 'SHARPIN', 'SHC1', 'SHFM1', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT5', 'SIRT6', 'SIRT7', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC2A4', 'SLC34A2', 'SLC9A3R1', 'SLC9A3R2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNCA', 'SNX27', 'SOCS1', 'SOCS3', 'SOD2', 'SOS1', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPOP', 'SPRY1', 'SPRY2', 'SRBD1', 'SRC', 'SREBF1', 'SRF', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STMN1', 'STUB1', 'STX16', 'SUCLG2', 'SUMO1', 'SYK', 'SYNJ1', 'SYNJ2', 'TACSTD2', 'TBX1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TEP1', 'TERT', 'TET1', 'TGFB1', 'TGFBR1', 'TGFBR2', 'TGM2', 'THBS1', 'TIMP1', 'TIMP3', 'TJP1', 'TLR4', 'TMEM55A', 'TMEM55B', 'TMPRSS2', 'TNFRSF10B', 'TNFSF10', 'TNF', 'TNKS2', 'TNKS', 'TNPO2', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TPM1', 'TRAF6', 'TRIM27', 'TRIM29', 'TSC1', 'TSC2', 'TTN', 'TUT1', 'TWIST1', 'TWSG1', 'TXN', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2E1', 'UBE2I', 'UBE2L3', 'UBE3A', 'ULK1', 'ULK2', 'USP10', 'USP13', 'USP18', 'USP28', 'USP7', 'USP8', 'UTF1', 'UVRAG', 'VCL', 'VDR', 'VEGFA', 'VHL', 'WDR18', 'WDTC1', 'WEE1', 'WIPI1', 'WIPI2', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT9A', 'WNT9B', 'WT1', 'WWP1', 'WWP2', 'XIAP', 'XPO1', 'XPO5', 'YAP1', 'YES1', 'YWHAB', 'YWHAZ', 'YY1', 'ZEB1', 'ZEB2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.8755081528767016e-15 NRMSE: 4.496142839303732e-16 MAPE: 3.5449033059389575e-12 Pearson Correlation: -0.03684501755059179 Spearman Correlation: 0.07771418596241848 Coefficient of Determination: -3.8508150694338132 RMSE: 1.0372654637510152 NRMSE: 0.2479953769786772 MAPE: 378.6790185373574 Predictor: ElasticNet Pearson Correlation: 0.8139325042954766 Spearman Correlation: 0.787782551249858 Coefficient of Determination: 0.6277658007152509 RMSE: 0.3839387501352844 NRMSE: 0.0600326401587498 MAPE: 448.20688780540837 Pearson Correlation: 0.27270924292761844 Spearman Correlation: 0.29767702839187526 Coefficient of Determination: -0.1678243566781894 RMSE: 0.5089455524048413 NRMSE: 0.12168162205442579 MAPE: 178.8612939292096 Predictor: RandomForests Pearson Correlation: 0.616328020472098 Spearman Correlation: 0.5349771004536952 Coefficient of Determination: 0.3047122631985977 RMSE: 0.5247302430469055 NRMSE: 0.08204678962503409 MAPE: 280.01313012289415 Pearson Correlation: 0.3753084805599388 Spearman Correlation: 0.37778276537113936 Coefficient of Determination: 0.1298675749156296 RMSE: 0.43931419412355455 NRMSE: 0.10503375750096938 MAPE: 106.72854284999677 Protein: BRCA2 Protein Interaction Partners Count: 361 x_train_column_count: 351 x_train columns: ['ABL1', 'ACHE', 'ADRB1', 'ADRB2', 'AKT1', 'ALK', 'APEX1', 'ARID1A', 'ARPC1A', 'AR', 'ATAD5', 'ATM', 'ATRIP', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'B3GALTL', 'BACH1', 'BARD1', 'BCCIP', 'BCHE', 'BDNF', 'BECN1', 'BIRC5', 'BLM', 'BMI1', 'BRCA1', 'BRCC3', 'BRE', 'BRIP1', 'SLX4', 'BUB1B', 'BUB1', 'BUB3', 'SFR1', 'RHNO1', 'RMI2', 'BABAM1', 'MMS22L', 'CASC1', 'CASC5', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCNE1', 'CDC25A', 'CDC25C', 'CDC45', 'CDC6', 'CDH1', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CENPE', 'CENPF', 'CEP55', 'CHEK1', 'CHEK2', 'CHRNA1', 'CLSPN', 'CNTROB', 'CREM', 'CSMD3', 'CTNNB1', 'CYP19A1', 'DMC1', 'DNA2', 'DSN1', 'DYNC1LI2', 'EGFR', 'EGF', 'ELAC2', 'EME1', 'EME2', 'ENAM', 'EPCAM', 'ERBB2', 'ERBB3', 'ERCC1', 'ERCC2', 'ERCC4', 'ERCC5', 'ERCC6', 'ERCC8', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM175A', 'FANCA', 'FANCB', 'FANCC', 'FANCD2', 'FANCE', 'FANCF', 'FANCG', 'FANCI', 'FANCL', 'FANCM', 'FBN1', 'FBXO18', 'FBXW7', 'FEN1', 'FGFR2', 'FHIT', 'FLNA', 'FOXM1', 'GAPDH', 'GEN1', 'SLX1B', 'H2AFX', 'HELQ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HMG20A', 'HMG20B', 'HMMR', 'HNRNPC', 'HOXB13', 'HRAS', 'HUS1', 'ITPKB', 'KAT2B', 'KAT5', 'KEAP1', 'SPIDR', 'KIF23', 'KIF4A', 'KIT', 'KLK3', 'KRAS', 'KRT5', 'LIG1', 'LIG3', 'LIG4', 'LIMD1', 'LSP1', 'MAD2L2', 'MAGED1', 'MAMSTR', 'MAP2K2', 'MAP3K1', 'MCM10', 'MCPH1', 'MDC1', 'MDM2', 'MDM4', 'MEN1', 'MGMT', 'MKI67', 'MLH1', 'MLH3', 'KMT2C', 'MND1', 'MORF4L1', 'MRE11A', 'MRPL36', 'MSH2', 'MSH3', 'MSH4', 'MSH5', 'MSH6', 'MTA2', 'FAN1', 'MUC1', 'MUS81', 'MUTYH', 'MYC', 'NBN', 'NCAPG', 'NEDD4', 'NF1', 'NHEJ1', 'NNT', 'NOTCH1', 'NSL1', 'NSMCE4A', 'OBFC1', 'OGG1', 'PALB2', 'PARG', 'PARP1', 'PARP2', 'PARP3', 'PAXIP1', 'PCNA', 'PDLIM7', 'PDS5A', 'PDS5B', 'PGR', 'PIK3CA', 'PLCB4', 'PLEC', 'PLEKHH1', 'PLK1', 'PMS1', 'PMS2', 'PNOC', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'POLN', 'POLQ', 'PRDM9', 'PRKDC', 'PRSS1', 'PSMC3IP', 'PSMD3', 'PSMD6', 'PTEN', 'RAD17', 'RAD18', 'RAD1', 'RAD21', 'RAD23B', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD52', 'RAD54B', 'RAD54L', 'RAD9A', 'RAD9B', 'RAG2', 'RASSF1', 'RBBP8', 'RBMX', 'RECQL4', 'RECQL5', 'RECQL', 'RET', 'REV1', 'REV3L', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RNF168', 'RNF8', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SKP2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCAL1', 'SMARCB1', 'SMC1A', 'SMC2', 'SMC3', 'SMC4', 'SMC5', 'SMC6', 'SMUG1', 'SNAI2', 'SP1', 'SPO11', 'STAT5A', 'STK11', 'STRA13', 'SUV39H1', 'SYCP3', 'TBCE', 'TDP1', 'TERT', 'TEX15', 'TMPRSS2', 'TNS1', 'TOP1', 'TOP2A', 'TOP3A', 'TOP3B', 'TOPBP1', 'TOX3', 'TP53BP1', 'TP53', 'TPX2', 'TRIP12', 'PRSS58', 'TTK', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2D1', 'UBE2E2', 'UBE2E3', 'UBE2N', 'UBE2T', 'UIMC1', 'USF1', 'USP11', 'USP15', 'USP1', 'USP21', 'USP4', 'UVRAG', 'VEGFA', 'VWF', 'WDR48', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WTIP', 'XPA', 'XPO1', 'XRCC1', 'XRCC2', 'XRCC3', 'XRCC4', 'XRCC5', 'XRCC6', 'ZFYVE26', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.8370864232511477 Spearman Correlation: 0.8194457309388669 Coefficient of Determination: 0.7007136799913993 RMSE: 0.10397086262058042 NRMSE: 0.07007444977528134 MAPE: 335.0665956607195 Pearson Correlation: 0.017075659230189846 Spearman Correlation: -0.040845895834112654 Coefficient of Determination: -1.9457209116499432 RMSE: 0.36751595210626686 NRMSE: 0.2527811265682183 MAPE: 959.7491478062447 Predictor: ElasticNet Pearson Correlation: 0.5078005352140759 Spearman Correlation: 0.48603319150470875 Coefficient of Determination: 0.2253774593950414 RMSE: 0.16726815987628704 NRMSE: 0.1127356643276946 MAPE: 192.1364822592316 Pearson Correlation: 0.18452537581385897 Spearman Correlation: 0.21328196112170975 Coefficient of Determination: 0.032002149996230966 RMSE: 0.21067722628099878 NRMSE: 0.14490589128544717 MAPE: 191.49818499619434 Predictor: RandomForests Pearson Correlation: 0.5952029688956896 Spearman Correlation: 0.5418972659754484 Coefficient of Determination: 0.22467742167893257 RMSE: 0.16734372414890591 NRMSE: 0.1127865932580985 MAPE: 173.18457571961864 Pearson Correlation: 0.13445482322785277 Spearman Correlation: 0.17930148754972008 Coefficient of Determination: 0.016841652050054723 RMSE: 0.21232059918593638 NRMSE: 0.14603621951174875 MAPE: 163.7509145227982 Protein: CDKN2A Protein Interaction Partners Count: 612 x_train_column_count: 605 x_train columns: ['ABCC1', 'ABL1', 'ACAP1', 'ACAP2', 'ACP5', 'ACTA1', 'ACTB', 'ACTG1', 'ADAMTS9', 'ADAP1', 'AFP', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD12', 'ANXA5', 'AP3D1', 'AP3S1', 'AP3S2', 'APAF1', 'APBA1', 'APBA2', 'ARAP1', 'ARAP2', 'ARF1', 'ARF3', 'ARF4', 'ARF5', 'ARF6', 'ARFGAP1', 'ARFGAP3', 'ARFIP2', 'ARFRP1', 'ARID1A', 'ARID2', 'ARID5B', 'ARL10', 'ARL1', 'ARL2', 'ARL3', 'ARL4A', 'ARL5A', 'AR', 'ASAP1', 'ATM', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'AXIN1', 'BAP1', 'BCL2L11', 'BCL2L1', 'BCL6', 'BECN1', 'BIRC5', 'BMI1', 'BRAF', 'BRCA1', 'BRCA2', 'BUB1B', 'RGCC', 'C1QBP', 'RABL6', 'CACNA1G', 'CADM1', 'CAMK1D', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNL1', 'CD274', 'CD34', 'CD44', 'CDC123', 'CDC20', 'CDC25A', 'CDC25C', 'CDC42', 'CDC45', 'CDC5L', 'CDC6', 'CDC7', 'CDH13', 'CDH17', 'CDH1', 'CDH2', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5RAP3', 'CDK6', 'CDK7', 'CDKAL1', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDX2', 'CEACAM5', 'CEBPB', 'CEBPE', 'CHEK1', 'CHEK2', 'CHFR', 'CHKA', 'COMMD1', 'CRABP1', 'CREBBP', 'CSF1R', 'CSF1', 'CSF2', 'CTBP1', 'CTBP2', 'CTCF', 'CTLA4', 'CTNNB1', 'CTSK', 'CUL1', 'CUL3', 'CXCR4', 'CYCS', 'CYLD', 'CYTH1', 'CYTH2', 'CYTH3', 'DAB2IP', 'DAP', 'DAXX', 'DICER1', 'DIRAS3', 'DLEC1', 'DMTF1', 'DNAH3', 'DNMT1', 'DNMT3A', 'DNMT3B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EBF1', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EP300', 'EPCAM', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ETS1', 'ETV6', 'EWSR1', 'EZH1', 'EZH2', 'FAT1', 'FBXW7', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FKBP2', 'FLT3', 'FMN2', 'FN1', 'FOS', 'FOXA1', 'FOXM1', 'FOXN2', 'FOXO1', 'FOXO3', 'FTO', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GATA4', 'GATA5', 'GBF1', 'GDF15', 'GGA1', 'GGA2', 'GGA3', 'GIT1', 'GIT2', 'GLI1', 'GLTSCR2', 'GMNN', 'GNA11', 'GNAQ', 'GNAS', 'GNL3', 'GOLPH3', 'GP5', 'GSPT1', 'GSTP1', 'H2AFX', 'H2AFZ', 'H3F3A', 'H3F3B', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC9', 'HELLS', 'HGF', 'HHEX', 'HIC1', 'HIF1A', 'HIST1H2BA', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AA3', 'HIST2H2AC', 'HIST2H4A', 'HIST4H4', 'HLTF', 'HMGA2', 'HNF4A', 'HNRNPD', 'HOPX', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA4', 'HSPA9', 'HUWE1', 'ID1', 'IDH1', 'IDH2', 'IGF1R', 'IGF1', 'IGF2BP2', 'IGF2R', 'IGF2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING4', 'INS', 'IQSEC1', 'IRS1', 'ISOC2', 'ITGAM', 'JAK1', 'JAK2', 'JAK3', 'JAZF1', 'JUNB', 'JUN', 'KAT2B', 'KAT5', 'KCNJ11', 'KCNQ1', 'KDM1A', 'KDM2B', 'KDM6A', 'KDM6B', 'KDR', 'KEAP1', 'KIAA1549', 'KIT', 'KLF4', 'KRAS', 'KRT19', 'KRT20', 'KRT5', 'KRT7', 'LATS2', 'LOX', 'LRRK2', 'MACROD2', 'MAF', 'MAP2K1', 'MAP2K4', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MAX', 'MC1R', 'MCL1', 'MCM10', 'MCM2', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEN1', 'MEOX1', 'MEOX2', 'MET', 'MGMT', 'MITF', 'MKRN1', 'MLANA', 'MLH1', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT3', 'MME', 'MMP2', 'MMP7', 'MMP9', 'MOV10', 'MRAS', 'MSH2', 'MSH6', 'MTA1', 'MTAP', 'MTHFR', 'MTNR1B', 'MTOR', 'MUC1', 'MYBL2', 'MYCL', 'MYCN', 'MYC', 'MYOD1', 'KAT6A', 'NANOG', 'NCAM1', 'NCL', 'NCOR1', 'NES', 'NEUROG1', 'NF1', 'NF2', 'NFATC1', 'NFE2L2', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NPM1', 'NRAS', 'NSUN2', 'ORC4', 'ORC5', 'OSBP2', 'P2RY8', 'PA2G4', 'PALB2', 'PARP1', 'PAX3', 'PAX5', 'PAX8', 'PBRM1', 'PCGF2', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PEX19', 'PGR', 'PHLDB1', 'PI3', 'PIAS2', 'PIGF', 'PIK3CA', 'PIK3R1', 'PIP4K2A', 'PLEKHA3', 'PLEKHA8', 'PLEK', 'PLK1', 'PMAIP1', 'PML', 'PMS2', 'POTEF', 'POU5F1', 'PPARA', 'PPARG', 'PPM1D', 'PPP1R9B', 'PPP3CA', 'PRDM2', 'PRMT6', 'PROM1', 'PRSS1', 'PSMC3', 'PSMD10', 'PSME3', 'PTCH1', 'PTEN', 'PTER', 'PTF1A', 'PTGS2', 'PTPN11', 'PTPRC', 'PTPRD', 'PXN', 'RAB11A', 'RAB5A', 'RABEP1', 'RABGEF1', 'RAC2', 'RAD51', 'RAF1', 'RAP2B', 'RARB', 'RASSF1', 'RASSF2', 'RB1', 'RBL1', 'RBL2', 'RCC1', 'RELA', 'RELB', 'REL', 'RET', 'RHOA', 'DROSHA', 'RNF2', 'RNF43', 'ROS1', 'RPL11', 'RPRM', 'RPS27A', 'RPS6KB1', 'RRAS2', 'RRAS', 'RTEL1', 'RUNX2', 'RUNX3', 'SDHC', 'SENP1', 'SENP3', 'SERPINE1', 'SERTAD1', 'SETD2', 'SFN', 'SFRP1', 'SFRP2', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SIX2', 'SKP2', 'SLC30A8', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SNAI1', 'SNAI2', 'SNCA', 'SOCS1', 'SOX2', 'SP1', 'SPEN', 'SRC', 'STAT1', 'STAT3', 'STK11', 'STK25', 'STK33', 'STMN1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUV39H1', 'SUZ12', 'SYNE1', 'SYP', 'TBL1XR1', 'TBRG1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TERT', 'TET2', 'TFDP1', 'TFPI2', 'TGFBR2', 'THADA', 'THBS1', 'TIMP3', 'TMCO1', 'TMEM115', 'TNFRSF10B', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TRADD', 'TRIM28', 'TRIP12', 'PRSS58', 'TSC2', 'TSPAN8', 'TTF1', 'TWIST1', 'TWSG1', 'TYR', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2I', 'UBE3A', 'UCHL1', 'USP7', 'UTF1', 'VEGFA', 'VHL', 'WDTC1', 'WEE1', 'WFS1', 'WHSC1', 'WIF1', 'WRN', 'WT1', 'WWOX', 'XRCC1', 'YY1', 'ZBTB17', 'ZBTB7A', 'ZEB1', 'ZFP91', 'ZNF148', 'ZNF217', 'ZNF227', 'ZNF410', 'ZNF420', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 3.949212296991975e-15 NRMSE: 9.220237899215482e-16 MAPE: 2.7608142603069344e-12 Pearson Correlation: 0.21818286765097644 Spearman Correlation: 0.1817553834835846 Coefficient of Determination: -5.0043784010826124 RMSE: 1.6087776368170994 NRMSE: 0.4966742727353584 MAPE: 654.7783856934441 Predictor: ElasticNet Pearson Correlation: 0.8563486404124122 Spearman Correlation: 0.8167400954214515 Coefficient of Determination: 0.7110298837061859 RMSE: 0.35886824392175853 NRMSE: 0.0837850774938734 MAPE: 167.5678826400764 Pearson Correlation: 0.5175440094482064 Spearman Correlation: 0.4146610306861683 Coefficient of Determination: 0.2492857516179463 RMSE: 0.5688520440547524 NRMSE: 0.17562040198041198 MAPE: 148.13657017244785 Predictor: RandomForests Pearson Correlation: 0.6768243977972589 Spearman Correlation: 0.62893616829792 Coefficient of Determination: 0.4463543207772377 RMSE: 0.49673472448774103 NRMSE: 0.11597280642691003 MAPE: 163.63957323645567 Pearson Correlation: 0.6157401758886617 Spearman Correlation: 0.5990972456015662 Coefficient of Determination: 0.3702552962414162 RMSE: 0.5210078363349826 NRMSE: 0.16084956819331994 MAPE: 105.49758831538445 Protein: TP53 Protein Interaction Partners Count: 1000 x_train_column_count: 991 x_train columns: ['ABCB1', 'ABCC1', 'ABL1', 'ACTB', 'ACTL6A', 'ADAM17', 'AFP', 'AGT', 'AICDA', 'AIFM2', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD2', 'ANXA1', 'ANXA2', 'ANXA5', 'APAF1', 'APBB1', 'APC', 'APEX1', 'APOBEC3B', 'APP', 'ARID1A', 'ARID3A', 'AR', 'ASF1A', 'ASXL1', 'ATF2', 'ATF3', 'ATG7', 'ATM', 'ATN1', 'ATRIP', 'ATRX', 'ATR', 'ATXN3', 'AURKA', 'AURKB', 'AXIN1', 'AXL', 'BACE1', 'BAG1', 'BAG2', 'BAIAP2L1', 'BAK1', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2A1', 'BCL2L11', 'BCL2L12', 'BCL2L14', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BID', 'BIRC3', 'BIRC5', 'BIRC6', 'BLM', 'BMF', 'BMI1', 'BMX', 'BNIP3L', 'BNIP3', 'BRCA1', 'BRCA2', 'BRCC3', 'BRD1', 'BRD4', 'BRD7', 'BRE', 'BRIP1', 'BRPF1', 'BRPF3', 'BTG2', 'BTK', 'BUB1B', 'BUB1', 'RHNO1', 'RGCC', 'RMI2', 'CNOT11', 'SETD9', 'CA9', 'CABIN1', 'CABLES1', 'CAPN1', 'CARM1', 'CASP10', 'CASP1', 'CASP2', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBX2', 'CBX4', 'CBX6', 'CBX8', 'CCDC106', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNG2', 'CCNH', 'CCNK', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CD24', 'CD274', 'CD34', 'CD40LG', 'CD40', 'CD44', 'CD82', 'CDC20', 'CDC25A', 'CDC25C', 'CDH17', 'CDH1', 'CDK12', 'CDK13', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CEACAM5', 'CEBPB', 'CENPJ', 'CFL1', 'CFLAR', 'CHD3', 'CHD4', 'CHD8', 'CHEK1', 'CHEK2', 'CHUK', 'CISH', 'CITED2', 'CLSPN', 'CLU', 'CNOT10', 'CNOT1', 'CNOT2', 'CNOT3', 'CNOT4', 'CNOT6L', 'CNOT6', 'CNOT7', 'CNOT8', 'COPS5', 'CREB1', 'CREBBP', 'CRYAB', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK1G1', 'CSNK1G2', 'CSNK1G3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTCF', 'CTGF', 'CTNNB1', 'CUL4A', 'CUL7', 'CUL9', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP1A1', 'DACH1', 'DAPK1', 'DAP', 'DAXX', 'DDB1', 'DDB2', 'DDIT4', 'DDX17', 'DDX3X', 'DDX5', 'DECR1', 'DGCR8', 'DHCR24', 'DHFR', 'DIABLO', 'DICER1', 'DKK1', 'DMTF1', 'DNA2', 'DNAJA3', 'DNAJB1', 'DNMT1', 'DNMT3A', 'DNTT', 'DPYD', 'DRAM1', 'DTL', 'DUSP1', 'DUSP2', 'DYRK1A', 'DYRK2', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EEF1A1', 'EEF1A2', 'EGFR', 'EGF', 'EGR1', 'EHMT1', 'EHMT2', 'EI24', 'EIF2AK2', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4EBP1', 'ELANE', 'ELAVL1', 'ELL3', 'ELL', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHA3', 'EPHB2', 'ERBB2', 'ERBB4', 'ERCC1', 'ERCC2', 'ERCC3', 'ERCC6', 'ESR1', 'ETS1', 'ETS2', 'EWSR1', 'EXO1', 'EZH2', 'F2', 'FADD', 'AMER1', 'FAM175B', 'FANCC', 'FANCD2', 'FASLG', 'FAS', 'FBL', 'FBXO11', 'FBXO4', 'FBXW7', 'FGF1', 'FGF2', 'FGFR3', 'FHIT', 'FHL2', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FSCN1', 'FUT4', 'FZR1', 'G3BP1', 'G6PD', 'GADD45A', 'GADD45B', 'GADD45G', 'GAPDH', 'GATAD2A', 'GATAD2B', 'GDF15', 'GFI1', 'GLS2', 'GLTSCR2', 'GNL3', 'GRAMD4', 'GRB10', 'GRB14', 'GSK3B', 'GSTP1', 'GTF2H1', 'GTSE1', 'H1F0', 'H2AFX', 'HAMP', 'HCK', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC5', 'HDAC7', 'HDAC8', 'HDAC9', 'HERC5', 'HIC1', 'HIF1A', 'HIPK1', 'HIPK2', 'HIPK3', 'HIPK4', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HK2', 'HMGA1', 'HMGA2', 'HMGB1', 'HMGB2', 'HMMR', 'HMOX1', 'HNF4A', 'HNRNPK', 'HNRNPL', 'HOXA5', 'HPGDS', 'HRAS', 'HSF1', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA1A', 'HSPA1B', 'HSPA1L', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'HSPB1', 'HSPB2', 'HTT', 'HUS1', 'HUWE1', 'ICAM1', 'ID2', 'ID4', 'IDH1', 'IDH2', 'IFI16', 'IFNAR1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IGFBP7', 'IKBKB', 'IL17A', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING2', 'ING3', 'ING4', 'ING5', 'INSIG1', 'INS', 'IRF1', 'ISG15', 'ITPKB', 'JAG1', 'JAK2', 'JMY', 'JUN', 'KAT2A', 'KAT2B', 'KAT5', 'KDM1A', 'KDM6A', 'KDM6B', 'KDR', 'KHDRBS1', 'CCAR2', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KPNA2', 'KRAS', 'KRT14', 'KRT17', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'L3MBTL1', 'LAMA4', 'LEP', 'LGALS7B', 'LGALS7', 'LIF', 'LIG4', 'LIN28A', 'PIDD1', 'LRRK2', 'LYN', 'MAF1', 'MAF', 'MAGEA2', 'MAP1LC3B', 'MAP2K1', 'MAP2K3', 'MAP2K7', 'MAP3K1', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MBD3', 'MCL1', 'MCM7', 'MDC1', 'MDH1', 'MDM2', 'MDM4', 'MEAF6', 'MECOM', 'MELK', 'MET', 'MGMT', 'MIF', 'MKI67', 'MKRN1', 'MLH1', 'KMT2D', 'KMT2C', 'MMP13', 'MMP1', 'MMP2', 'MMP9', 'MOV10', 'MRE11A', 'MSH2', 'MSH6', 'MSX1', 'MT1A', 'MT2A', 'MTA1', 'MTA2', 'MTA3', 'MTOR', 'MUC1', 'MUTYH', 'MYBBP1A', 'MYB', 'MYCN', 'MYC', 'MYOCD', 'KAT8', 'KAT6A', 'NANOG', 'NBN', 'NCL', 'NCOA3', 'NCOR1', 'NCOR2', 'NDN', 'NDRG1', 'NEDD8', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFE2L2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NFKBIB', 'NFYA', 'NFYB', 'NFYC', 'NGFR', 'NKX2-1', 'NLK', 'NLRC4', 'NME1', 'NOC2L', 'NOS3', 'NOTCH1', 'NOTCH3', 'NOTCH4', 'NOX4', 'NPM1', 'NQO1', 'NR1I2', 'NR2E1', 'NR3C1', 'NR4A1', 'NR4A2', 'NRAS', 'NUAK1', 'NUMB', 'NUPR1', 'OGG1', 'OLIG2', 'OPN1SW', 'OSGIN1', 'OTUB1', 'OTUB2', 'OTUD5', 'PADI4', 'PALB2', 'PARK2', 'PARK7', 'PARP1', 'PATZ1', 'PAX2', 'PAX3', 'PAX8', 'PBK', 'PBRM1', 'PCBP4', 'PCNA', 'PDCD4', 'PDCD5', 'PDGFRA', 'PDGFRB', 'PDLIM7', 'PER2', 'PERP', 'PGR', 'PHB', 'PHC1', 'PHC2', 'PHC3', 'PHF20', 'PHGDH', 'PI3', 'PIAS1', 'PIAS2', 'PIAS4', 'PIK3CA', 'PIN1', 'PKM', 'PLAGL1', 'PLAU', 'PLK1', 'PLK2', 'PLK3', 'PLK4', 'PMAIP1', 'PML', 'PMS2', 'POLI', 'POLK', 'POU4F1', 'POU4F2', 'POU5F1', 'PPARGC1A', 'PPARG', 'PPIF', 'PPM1D', 'PPP1R13B', 'PPP1R13L', 'PPP1R15A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R4', 'PPP2R5C', 'PRDM1', 'PRDM2', 'PRDX1', 'PRELID1', 'PRIMA1', 'PRKAA1', 'PRKAA2', 'PRKAB1', 'PRKAB2', 'PRKAG1', 'PRKAG2', 'PRKAG3', 'PRKCA', 'PRKCD', 'PRKCZ', 'PRKD1', 'PRKDC', 'PRKG1', 'PRMT1', 'PRMT5', 'PROM1', 'PSEN1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTBP1', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2', 'PTTG1', 'RABGGTA', 'RABGGTB', 'RAD17', 'RAD1', 'RAD50', 'RAD51', 'RAD9A', 'RAD9B', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP4', 'RBBP6', 'RBBP7', 'RBBP8', 'RBL1', 'RBL2', 'RBM38', 'RBPJ', 'RCHY1', 'RCOR1', 'RECQL4', 'RELA', 'REM1', 'REST', 'RET', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RFFL', 'RFWD2', 'RING1', 'RMI1', 'DROSHA', 'RNF20', 'RNF2', 'RNF34', 'RNF43', 'ROCK1', 'RPA1', 'RPA2', 'RPA3', 'RPL11', 'RPL22', 'RPL26', 'RPL5', 'RPRM', 'RPS14', 'RPS19', 'RPS27A', 'RPS27L', 'RPS3', 'RPS6KB1', 'RQCD1', 'RRAD', 'RRM2B', 'RRM2', 'RUNX2', 'RUNX3', 'S100A2', 'S100A4', 'S100A6', 'S100B', 'SALL4', 'SCO2', 'SDHC', 'SENP1', 'SENP3', 'SERPINB5', 'SERPINE1', 'SESN1', 'SESN2', 'SESN3', 'SETD2', 'SETD7', 'SETD8', 'SETDB1', 'SFN', 'SRSF1', 'SGK1', 'SHFM1', 'SHH', 'SHISA5', 'SIK1', 'SIN3A', 'SIN3B', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SKP2', 'SLC2A14', 'SLC2A1', 'SLC2A2', 'SLC2A3', 'SLC6A6', 'SLMO1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMG1', 'SMG7', 'SMYD2', 'SNAI1', 'SNAI2', 'SOCS1', 'SOCS3', 'SOD2', 'SORT1', 'SOX2', 'SOX4', 'SP100', 'SP1', 'SP3', 'SP7', 'SPATA18', 'SPP1', 'SQSTM1', 'SRC', 'SREBF1', 'SREBF2', 'SSRP1', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STEAP3', 'STK11', 'STMN1', 'STUB1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUMO4', 'SUPT16H', 'SUV39H1', 'SUZ12', 'SYK', 'SYP', 'TADA3', 'TAF10', 'TAF11', 'TAF12', 'TAF13', 'TAF15', 'TAF1L', 'TAF1', 'TAF2', 'TAF3', 'TAF4B', 'TAF4', 'TAF5', 'TAF6', 'TAF7L', 'TAF7', 'TAF9B', 'TBPL1', 'TBPL2', 'TBP', 'TCHP', 'TCP1', 'TDG', 'TERT', 'TET2', 'TFAM', 'TFAP2A', 'TFAP2C', 'TFDP1', 'TFF1', 'TGFB1', 'TGM2', 'THBS1', 'TIMP3', 'TLR3', 'TLR9', 'TMEM219', 'TNFAIP3', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF10C', 'TNFRSF10D', 'TNF', 'TNK2', 'TNKS1BP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOE1', 'TOP1', 'TOP2A', 'TOP3A', 'TOPBP1', 'TOPORS', 'TP53AIP1', 'TP53BP1', 'TP53BP2', 'TP53I3', 'TP53INP1', 'TP53RK', 'TP63', 'TP73', 'TPT1', 'TPX2', 'TRAF6', 'TRIAP1', 'TRIM24', 'TRIM28', 'TRIM29', 'TRIM32', 'TRIM59', 'TRIM8', 'TRRAP', 'TSC2', 'TTC5', 'TTK', 'TWIST1', 'TWIST2', 'TXN', 'TYMS', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2D1', 'UBE2E1', 'UBE2I', 'UBE2K', 'UBE2N', 'UBE2Q1', 'UBE2S', 'UBE3A', 'UBN1', 'UCHL1', 'UHRF1', 'USF1', 'USP10', 'USP15', 'USP24', 'USP3', 'USP42', 'USP7', 'UTP14A', 'VEGFA', 'VHL', 'VPRBP', 'VRK1', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WWOX', 'XAF1', 'XIAP', 'XPA', 'XPO1', 'XRCC1', 'XRCC5', 'XRCC6', 'YBX1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'YY1', 'YY2', 'ZBTB33', 'ZBTB7A', 'ZEB1', 'ZEB2', 'ZKSCAN4', 'ZNF148', 'ZNF274', 'ZNF385A', 'ZNF420', 'ZNF668', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.7589447196366502e-15 NRMSE: 4.2272163413521995e-16 MAPE: 3.763291593804053e-12 Pearson Correlation: 0.36406412174818814 Spearman Correlation: 0.21511240788538513 Coefficient of Determination: -1.668267759949127 RMSE: 0.7031301796651764 NRMSE: 0.26219666690228044 MAPE: 1051.3121667351127 Predictor: ElasticNet Pearson Correlation: 0.8185758022920058 Spearman Correlation: 0.7523402435034591 Coefficient of Determination: 0.6374182070467735 RMSE: 0.2710343685088104 NRMSE: 0.06513683453708494 MAPE: 445.89373285843755 Pearson Correlation: 0.5100670972292513 Spearman Correlation: 0.47888128280901265 Coefficient of Determination: 0.2488472357662549 RMSE: 0.37306556954225606 NRMSE: 0.13911584468833313 MAPE: 578.0778509715002 Predictor: RandomForests Pearson Correlation: 0.6795584244288518 Spearman Correlation: 0.5702024849768648 Coefficient of Determination: 0.3851315961900421 RMSE: 0.35294940755893545 NRMSE: 0.08482321738979463 MAPE: 572.04274768233 Pearson Correlation: 0.501519972170205 Spearman Correlation: 0.44336268951354246 Coefficient of Determination: 0.23124377899961557 RMSE: 0.37741169727490764 NRMSE: 0.1407365121527498 MAPE: 398.6003610153303 Protein: CTNNB1 Protein Interaction Partners Count: 992 x_train_column_count: 984 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACAN', 'ACP1', 'ACTA1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTN4', 'ACVR1B', 'ACVR1', 'ADAM10', 'ADCY7', 'ADIPOQ', 'AES', 'AFP', 'AHI1', 'AHR', 'AHSA1', 'AJAP1', 'AK9', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'ALPL', 'AMHR2', 'AMH', 'ANXA5', 'AP1M1', 'APC2', 'APCS', 'APC', 'APH1A', 'APH1B', 'AQP1', 'ARHGAP10', 'ARHGAP21', 'ARHGAP32', 'ARHGEF4', 'ARID1A', 'ARID2', 'ARMC7', 'ARMC8', 'ARVCF', 'ARX', 'AR', 'ASCL1', 'ASF1A', 'ASH2L', 'ASIP', 'ATF4', 'ATM', 'AURKA', 'AXIN1', 'AXIN2', 'BAG3', 'BCAR1', 'BCL2L1', 'BCL3', 'BCL6', 'BCL9L', 'BCL9', 'BDNF', 'BGLAP', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BMPR1B', 'BNIP2', 'BRAF', 'BRCA1', 'BRCA2', 'BRMS1L', 'BTRC', 'HILPDA', 'AK8', 'CA2', 'CA9', 'CABLES1', 'CACYBP', 'CALM1', 'CALM3', 'CARM1', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBLL1', 'CBL', 'CBY1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CD24', 'CD34', 'CD40', 'CD44', 'CDC27', 'CDC42', 'CDC73', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH16', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH26', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDHR5', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK8', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDON', 'CDX1', 'CDX2', 'CEBPA', 'CHD8', 'CHRD', 'CHUK', 'CITED1', 'CKAP5', 'CLCA1', 'CLDN3', 'CLDN5', 'COL1A1', 'COPS3', 'COPS5', 'COPS6', 'CREB1', 'CREBBP', 'CRKL', 'CRK', 'CRP', 'CRYAB', 'CSNK1A1L', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK2A3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNAL1', 'CTNNBIP1', 'CTNND1', 'CTNND2', 'CTTN', 'CUL1', 'CUL4A', 'CUL4B', 'CXCR4', 'CXXC4', 'DAB2', 'DACT1', 'DACT2', 'DACT3', 'DCT', 'DCX', 'DDB1', 'DDX39A', 'DDX3X', 'DDX5', 'DHODH', 'DHX9', 'DKK1', 'DKK2', 'DKK3', 'DKK4', 'DLG1', 'DLG2', 'DLG4', 'DLG5', 'DLGAP1', 'DLL4', 'DLX1', 'DNM2', 'DNMT1', 'DPYD', 'DSC1', 'DSC2', 'DSC3', 'DSG1', 'DSG2', 'DSG3', 'DSG4', 'DSP', 'DUSP6', 'DVL1', 'DVL2', 'DVL3', 'E2F3', 'ECM1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'ELAVL1', 'EMD', 'ENAH', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHB2', 'EPHB3', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EXOC3', 'EXOC4', 'EYA4', 'EZH2', 'EZR', 'F2RL2', 'FAF1', 'AMER1', 'FANCA', 'FASLG', 'FAS', 'FAT1', 'FAT4', 'FBXW11', 'FBXW7', 'FERMT2', 'FER', 'FGF10', 'FGF13', 'FGF2', 'FGF3', 'FGF4', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FLT3', 'FMN1', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC2', 'FOXG1', 'FOXL1', 'FOXL2', 'FOXM1', 'FOXN3', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FRAT1', 'FRAT2', 'FRZB', 'FSCN1', 'FSTL1', 'FSTL3', 'FURIN', 'FUS', 'FXR1', 'FYN', 'FZD10', 'FZD1', 'FZD2', 'FZD3', 'FZD4', 'FZD5', 'FZD6', 'FZD7', 'FZD8', 'FZD9', 'GAPDH', 'GATA2', 'GATA4', 'GCG', 'GDF2', 'GDNF', 'GFRA1', 'GJA1', 'GLI1', 'GLI2', 'GLI3', 'GLIS2', 'GLUL', 'GNA11', 'GNA12', 'GNA13', 'GNAQ', 'GNAS', 'GPC3', 'GRIA2', 'GRIP1', 'GSK3A', 'GSK3B', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HAS2', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC7', 'HERC5', 'HES7', 'HGF', 'HGS', 'HHEX', 'HIC1', 'HIF1A', 'HINT1', 'HIPK2', 'HIST1H1C', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HMGB1', 'HNF1A', 'HNF4A', 'HNRNPA1', 'HNRNPA2B1', 'HNRNPK', 'HNRNPM', 'HOXA10', 'HOXB4', 'HPGD', 'HRAS', 'HSP90AB1', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPD1', 'HTRA1', 'HTT', 'HUWE1', 'IBSP', 'IDH1', 'IDH2', 'IFNB1', 'IFRD1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP4', 'IHH', 'IKBKB', 'IL6', 'CXCL8', 'ILK', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IRF3', 'ISG15', 'ISL1', 'ITGAE', 'ITGB1', 'ITGB7', 'ITK', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'AJUBA', 'JUN', 'JUP', 'KANK1', 'KAT2A', 'KAT2B', 'KAT5', 'KCNN1', 'KCTD1', 'KDM1A', 'KDR', 'KIF18B', 'KIF3A', 'KIF5B', 'KIFC3', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KRAS', 'KREMEN1', 'KRIT1', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LATS2', 'LDB1', 'LDHB', 'LDLR', 'LEF1', 'LEO1', 'LGR4', 'LGR5', 'LGR6', 'LHCGR', 'LHX8', 'LIF', 'LIMA1', 'LMNA', 'LMNB1', 'LOX', 'LRP4', 'LRP5L', 'LRP5', 'LRP6', 'LRRFIP1', 'LRRK2', 'LZTFL1', 'MACF1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8IP1', 'MAPK8', 'MAPK9', 'MDFIC', 'MDFI', 'MDK', 'MDM2', 'MED12', 'MED1', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'KMT2D', 'MLLT10', 'MLLT11', 'MLLT4', 'MLLT6', 'KMT2A', 'MME', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP25', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MRAP', 'MSH2', 'MSH6', 'MSN', 'MSX1', 'MSX2', 'MTDH', 'MTOR', 'MUC13', 'MUC1', 'MUTYH', 'MYCN', 'MYC', 'MYF5', 'MYO1D', 'MYO6', 'MYO7A', 'MYOD1', 'MYOG', 'NANOG', 'NCAM1', 'NCCRP1', 'NCOA2', 'NCSTN', 'NDP', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEURL2', 'NF1', 'NF2', 'NFAT5', 'NFKB1', 'NIT1', 'NKD1', 'NKX2-5', 'NLK', 'NME1', 'NOG', 'NONO', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR0B1', 'NR4A1', 'NR4A2', 'NR5A1', 'NR5A2', 'NRAS', 'NRIP1', 'NTRK1', 'NTRK2', 'NTRK3', 'NUDT5', 'NUMB', 'NUP153', 'NUTF2', 'OTX2', 'PAK1', 'PAK2', 'PAK3', 'PANK4', 'PARD3', 'PARD6A', 'PARK2', 'PARP1', 'PAX3', 'PAX6', 'PAX7', 'PAX8', 'PDGFRA', 'PDGFRB', 'PECAM1', 'PGK1', 'PGR', 'PHB', 'JADE1', 'PI3', 'PICK1', 'PIK3CA', 'PIK3R1', 'PIK3R2', 'PIN1', 'PIP5K1A', 'PIP5K1C', 'PITX2', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAG1', 'PLEKHA7', 'PLK1', 'PML', 'PMS2', 'POLE', 'PORCN', 'POTEF', 'POU5F1', 'PPARD', 'PPARG', 'PPM1A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R2B', 'PPP2R5A', 'PPP2R5B', 'PPP2R5C', 'PPP2R5D', 'PPP2R5E', 'PRKACA', 'PRKACB', 'PRKACG', 'PRKAR1A', 'PRKCA', 'PRKCG', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRL', 'PRMT1', 'PROC', 'PROM1', 'PROP1', 'PSEN1', 'PSEN2', 'PSENEN', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTEN', 'PTGES3', 'PTGS2', 'PTH1R', 'PTH', 'PTK2', 'PTK7', 'PTMA', 'PTN', 'PTPN11', 'PTPN13', 'PTPN1', 'PTPN6', 'PTPRB', 'PTPRC', 'PTPRF', 'PTPRG', 'PTPRJ', 'PTPRK', 'PTPRM', 'PTPRU', 'PTPRZ1', 'PVRL1', 'PVRL2', 'PXN', 'PYGO1', 'PYGO2', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RALGDS', 'RANBP3', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RAPGEF2', 'RAPGEF6', 'RAPSN', 'RARA', 'RARB', 'RARG', 'RARS', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP5', 'RBMX', 'RBPJ', 'RBX1', 'RELA', 'REM1', 'RET', 'RHOA', 'RIPK2', 'RNF220', 'RNF43', 'ROBO1', 'ROCK1', 'ROCK2', 'ROR2', 'RPRD1A', 'RPS27A', 'RPSA', 'RSPO1', 'RSPO2', 'RSPO3', 'RSPO4', 'RUNX2', 'RUNX3', 'RUVBL1', 'RUVBL2', 'RXRA', 'RYK', 'S100A4', 'S100A6', 'SALL1', 'SALL4', 'SATB1', 'SCRIB', 'SDHC', 'SERPINE1', 'SETD2', 'SETD7', 'SFN', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHFM1', 'SHH', 'SIAH1', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT6', 'SKP1', 'SLC6A3', 'SLC9A3R1', 'SLCO1B3', 'SLCO2A1', 'SLIT1', 'SLK', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD5', 'SMAD7', 'SMAD9', 'SMARCA2', 'SMARCA4', 'SMARCA5', 'SMARCB1', 'SMO', 'SMURF1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNX1', 'SOST', 'SOX10', 'SOX13', 'SOX17', 'SOX1', 'SOX2', 'SOX3', 'SOX4', 'SOX6', 'SOX7', 'SOX8', 'SOX9', 'SP1', 'SP7', 'SPAG9', 'SPATA13', 'SPEN', 'SPN', 'SPP1', 'SRC', 'STAT3', 'STK11', 'STRAP', 'STX4', 'SUFU', 'SUV39H1', 'SYP', 'TADA3', 'TAX1BP3', 'TAZ', 'TBL1XR1', 'TBL1X', 'TBX5', 'TBX6', 'TCF12', 'TCF3', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TFAP2A', 'TFCP2', 'TFF1', 'TFF2', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBR1', 'TGFBR2', 'TGM2', 'TJP1', 'TJP2', 'TLE1', 'TLE2', 'TLE3', 'TLE4', 'TNFRSF11B', 'TNFSF11', 'TNF', 'TNIK', 'TNKS2', 'TNKS', 'TNS1', 'TOB1', 'TOP2A', 'TP53', 'TRAF4', 'TRIM33', 'TRIM37', 'TRIP10', 'TRRAP', 'TSC2', 'TUBA1A', 'TWIST1', 'TYMS', 'T', 'UBA52', 'UBB', 'UBC', 'UBE2B', 'UBE2R2', 'UBE3A', 'UBR5', 'UCHL1', 'UMPS', 'UPRT', 'USP4', 'USP7', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VAV2', 'VAV3', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VHL', 'VIM', 'WDR64', 'WDTC1', 'WHSC1', 'WIF1', 'WISP1', 'WLS', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'WWTR1', 'XPO1', 'YAP1', 'YARS', 'YEATS4', 'YES1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'ZAP70', 'ZAR1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZIC3', 'ZNRF3', 'ZYX', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.9999999999999994 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 2.8221581320257743e-15 NRMSE: 5.551058481561319e-16 MAPE: 1.8372971921140444e-12 Pearson Correlation: 0.19625690175047453 Spearman Correlation: 0.1322036434369506 Coefficient of Determination: -2.585815463484567 RMSE: 1.1607359906598664 NRMSE: 0.379461895014504 MAPE: 959.7506505865116 Predictor: ElasticNet Pearson Correlation: 0.8900242685304752 Spearman Correlation: 0.8753788522716193 Coefficient of Determination: 0.7666386461515257 RMSE: 0.37157997244403207 NRMSE: 0.07308811417073802 MAPE: 169.48947273570144 Pearson Correlation: 0.3811138123100104 Spearman Correlation: 0.2961558124166137 Coefficient of Determination: -0.01686707977234736 RMSE: 0.6181182646528177 NRMSE: 0.2020720731808224 MAPE: 1468.7056949416026 Predictor: RandomForests Pearson Correlation: 0.6759799490124614 Spearman Correlation: 0.6672207497533661 Coefficient of Determination: 0.4499730499716307 RMSE: 0.5704660652230691 NRMSE: 0.1122081166843173 MAPE: 245.27036742599236 Pearson Correlation: 0.44935709301694193 Spearman Correlation: 0.3349692639559097 Coefficient of Determination: 0.18377873651508103 RMSE: 0.5537878651614647 NRMSE: 0.18104150680357797 MAPE: 1039.8099966064203 Protein: CCNE1 Protein Interaction Partners Count: 350 x_train_column_count: 347 x_train columns: ['ABL1', 'AKT1', 'AKT2', 'AKT3', 'ALDH18A1', 'ANAPC10', 'ANAPC13', 'ANAPC1', 'ANAPC2', 'ANAPC4', 'ANAPC5', 'ANAPC7', 'ANXA5', 'ARID1A', 'AR', 'ATM', 'AURKA', 'AURKB', 'BARD1', 'BCL2L1', 'BIRC5', 'BRCA1', 'BRCA2', 'BTG2', 'BTRC', 'BUB1B', 'BUB1', 'BUB3', 'RGCC', 'MLIP', 'CABLES1', 'CALM1', 'CAPRIN1', 'CASP3', 'CASP9', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNF', 'CCNG1', 'CCNH', 'CCNK', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CDC16', 'CDC20', 'CDC23', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC26', 'CDC27', 'CDC45', 'CDC6', 'CDC7', 'CDCA2', 'CDCA5', 'CDCA8', 'CDH1', 'CDK12', 'CDK13', 'CDK14', 'CDK15', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CENPA', 'CENPE', 'CHAF1A', 'CHD1L', 'CHEK1', 'CHEK2', 'CINP', 'CKS1B', 'CKS2', 'COPS5', 'CREBBP', 'CSK', 'CTNNB1', 'CUL1', 'CUL3', 'CUL4B', 'DBF4B', 'DBF4', 'DGCR8', 'DICER1', 'DTL', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'EBNA1BP2', 'ECT2', 'EGFR', 'EGF', 'ELAVL1', 'ELSPBP1', 'EP400', 'ERBB2', 'ERBB3', 'ERBB4', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM58A', 'FAM83H', 'FBXO5', 'FBXW7', 'FEN1', 'FGFR1', 'FGFR2', 'FGFR3', 'FOXM1', 'FZR1', 'GAPDH', 'GLI1', 'GMNN', 'GSK3B', 'H1F0', 'HDAC1', 'HEATR3', 'HERC5', 'HIST1H1A', 'HIST1H1B', 'HIST1H4A', 'HRAS', 'IFNAR1', 'IGF1R', 'IGF1', 'ITPKB', 'JUN', 'KIF11', 'KIF20A', 'KIF23', 'KIF2C', 'KPNA2', 'KRAS', 'LATS2', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'GMNC', 'MAD2L1', 'MAPK3', 'MATK', 'MAX', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDM2', 'MEGF11', 'MELK', 'MKI67', 'KMT2D', 'KMT2B', 'MNAT1', 'MRE11A', 'MTOR', 'MYBL2', 'MYC', 'NBN', 'NF1', 'NFYB', 'NMI', 'NOTCH1', 'NOTCH3', 'NPAT', 'NRAS', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PARK2', 'PARP1', 'PCBP4', 'PCNA', 'PIK3CA', 'PIK3R1', 'PKMYT1', 'PLK1', 'PLK4', 'POLA1', 'POLD1', 'PPP1R1C', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R4', 'PRC1', 'PRKAR1A', 'PRKAR2A', 'PRMT5', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB10', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSMF1', 'PTEN', 'PTGDR', 'PTK6', 'PTTG1', 'RAD51', 'RAD54L', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RBX1', 'REL', 'REM1', 'RHOA', 'RHOBTB3', 'RINT1', 'RNASE1', 'RPRD1A', 'RPS27A', 'RRM1', 'RRM2', 'RRN3', 'RSF1', 'SHFM1', 'SKP1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'ST8SIA1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STK3', 'STK4', 'TARBP1', 'TCP1', 'TERF1', 'TERT', 'TFDP1', 'TK1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TPX2', 'TTK', 'TUBG1', 'TYMS', 'UBA52', 'UBB', 'UBC', 'UBE2C', 'UBE2QL1', 'UBE2S', 'UHRF2', 'WEE1', 'WEE2', 'XIAP', 'YAP1', 'ZNF217', 'ZNF33A', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.9634512426452686 Spearman Correlation: 0.877580012336347 Coefficient of Determination: 0.9282382969547128 RMSE: 0.13994862668361904 NRMSE: 0.03377383176475591 MAPE: 23.608953704564787 Pearson Correlation: 0.46929199860390214 Spearman Correlation: 0.29576179254105417 Coefficient of Determination: -0.7862742529956537 RMSE: 0.48767939097050816 NRMSE: 0.2124316726795784 MAPE: 116.86575662802576 Predictor: ElasticNet Pearson Correlation: 0.8971646628539846 Spearman Correlation: 0.7408496967553968 Coefficient of Determination: 0.7982856604647721 RMSE: 0.2346338457674005 NRMSE: 0.05662423577175001 MAPE: 50.96797115104646 Pearson Correlation: 0.7385854660062195 Spearman Correlation: 0.5724734722378084 Coefficient of Determination: 0.4966097804567249 RMSE: 0.25888847686317273 NRMSE: 0.11277104014600023 MAPE: 105.1636117298808 Predictor: RandomForests Pearson Correlation: 0.8640709868805985 Spearman Correlation: 0.7271815999793318 Coefficient of Determination: 0.7426045372181613 RMSE: 0.2650468921819653 NRMSE: 0.06396382271447386 MAPE: 55.659360733982865 Pearson Correlation: 0.7733595740913468 Spearman Correlation: 0.6680465876852942 Coefficient of Determination: 0.544739912409206 RMSE: 0.24620117572034597 NRMSE: 0.10724449001191182 MAPE: 78.93821153688324 Protein: CCND1 Protein Interaction Partners Count: 857 x_train_column_count: 849 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTL6B', 'AFP', 'AHR', 'AKAP12', 'AKAP8', 'AKR1B10', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDOA', 'ALK', 'ANO1', 'ANXA5', 'APAF1', 'APC', 'APEX1', 'AREG', 'ARHGEF2', 'ARID1A', 'ARID1B', 'ARID2', 'ARID4A', 'AR', 'ASIP', 'ATF2', 'ATF3', 'ATF4', 'ATM', 'ATXN1', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'B2M', 'BANP', 'BARX2', 'BAX', 'BCAR1', 'BCAR3', 'BCCIP', 'BCL2A1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL3', 'BCL6', 'BCL9', 'BECN1', 'BGLAP', 'BHLHE40', 'BIRC2', 'BIRC3', 'BIRC5', 'BMI1', 'BMP4', 'BMP6', 'BRAF', 'BRCA1', 'BRCA2', 'BRD2', 'BRD4', 'BTC', 'BTG2', 'BTRC', 'RGCC', 'COPRS', 'CA9', 'CARD11', 'CARM1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBFB', 'CCDC62', 'CCL2', 'CCL5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNC', 'CCND2', 'CCND3', 'CCNDBP1', 'CCNE1', 'CCNE2', 'CCNG2', 'CCNH', 'CCNK', 'CCNL1', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CD19', 'CD22', 'CD24', 'CD34', 'CD38', 'CD44', 'CD5', 'CD79A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC6', 'CDC73', 'CDCA7L', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK12', 'CDK13', 'CDK14', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK20', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CDX2', 'CENPE', 'CEP57', 'CFLAR', 'CHEK1', 'CHEK2', 'CHKA', 'CHUK', 'CKS1B', 'CKS2', 'CLCN3', 'COL1A1', 'CR2', 'CREB1', 'CREBBP', 'CRKL', 'CRYAB', 'CSF2', 'CTBP1', 'CTGF', 'CTNNB1', 'CTNND1', 'CTTN', 'CUL1', 'CUL3', 'CUL7', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'CYR61', 'DACH1', 'DAXX', 'DDIT3', 'DDX53', 'DECR1', 'DHFR', 'DICER1', 'DKK1', 'DKK3', 'DLL1', 'DMTF1', 'DND1', 'DNMT1', 'DNMT3A', 'DNTT', 'DVL1', 'DVL2', 'DYRK1A', 'DYRK1B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EDN1', 'EEF1A1', 'EGFR', 'EGF', 'EGLN2', 'EGR1', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF3I', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4E', 'EIF4G1', 'ELAVL1', 'ELSPBP1', 'EP300', 'EPCAM', 'EPHA2', 'EPHA7', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EWSR1', 'EYA1', 'EZH2', 'FABP4', 'FADD', 'FAM58A', 'FAM83H', 'FASLG', 'FAT1', 'FBXO31', 'FBXO4', 'FBXW7', 'FBXW8', 'FGF13', 'FGF19', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FHL2', 'FIGF', 'FLCN', 'FLNA', 'FLT1', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXC1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FRZB', 'FSTL3', 'FZD1', 'FZD2', 'FZD7', 'FZD9', 'FZR1', 'GADD45A', 'GAL', 'GAPDH', 'GAST', 'GATA3', 'GATA4', 'GDF15', 'GDF2', 'GGNBP2', 'GGT1', 'GIT1', 'GJA1', 'GJB1', 'GLI1', 'GLI2', 'GLI3', 'GLTSCR2', 'GNB2L1', 'GPER1', 'GRB2', 'GREB1', 'GRM4', 'GRP', 'GSK3B', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HBEGF', 'HBZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC4', 'HEXIM1', 'HEY1', 'HGF', 'HIF1A', 'HIST1H2AA', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AH', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AC', 'HIST2H2BE', 'HIST2H4A', 'HIST4H4', 'HMGA2', 'HMOX1', 'HNF1A', 'HNF4A', 'HNRNPD', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB8', 'ICAM1', 'ID1', 'ID2', 'IFNAR1', 'IFNB1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP3', 'IGFBP5', 'IHH', 'IKBKB', 'IL10', 'IL17A', 'IL2', 'IL4', 'IL6', 'IL7', 'CXCL8', 'ILK', 'INSM1', 'INS', 'IRF1', 'IRS1', 'ISG15', 'ITGB1', 'ITPKB', 'ITPKC', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUNB', 'JUND', 'JUN', 'KAT2A', 'KAT2B', 'KDM1A', 'KDM5B', 'KDR', 'KHDRBS1', 'KIF18B', 'KIN', 'KITLG', 'KIT', 'KLF13', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KRAS', 'KRT10', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LDB3', 'LEF1', 'LEP', 'LGALS3', 'LGR5', 'LIMK2', 'LIMS1', 'LIN28B', 'LMNA', 'LMNB1', 'LOX', 'LRP5', 'LRP6', 'LYN', 'MAFB', 'MAF', 'MAML1', 'MAML2', 'MAML3', 'MAMLD1', 'MAP2K1', 'MAP2K2', 'MAP2K4', 'MAP2K7', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDK', 'MDM2', 'MDM4', 'MEN1', 'MET', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'MLXIPL', 'MME', 'MMP11', 'MMP14', 'MMP15', 'MMP1', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MNAT1', 'MOV10', 'MSH2', 'MST1', 'MTOR', 'MUC1', 'MYBL2', 'MYB', 'MYCN', 'MYC', 'MYEOV', 'MYF5', 'MYOD1', 'MYOG', 'NACA2', 'NADSYN1', 'NANOG', 'NCAM1', 'NCOA1', 'NCOA3', 'NCOR1', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NGF', 'NKX2-1', 'NME1-NME2', 'NME1', 'NME2', 'NMI', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NQO1', 'NR0B2', 'NR1H3', 'NR2E1', 'NR3C1', 'NR4A3', 'NRAS', 'NRF1', 'NUDT21', 'ODC1', 'ORAI1', 'ORAOV1', 'ORC4', 'PAK1', 'PAK4', 'PARK2', 'PARP1', 'PAX2', 'PAX5', 'PAX6', 'PBRM1', 'PBX3', 'PCNA', 'PDCD4', 'PDGFRA', 'PDGFRB', 'PDZK1', 'PECAM1', 'PELP1', 'PGR', 'PI3', 'PI4K2A', 'PIK3CA', 'PIK3R1', 'PKLR', 'PKM', 'PLAUR', 'PLAU', 'PLK1', 'PMAIP1', 'POLR2A', 'POTEF', 'POU2F1', 'POU5F1', 'PPARG', 'PPP2R4', 'PRDM5', 'PRKACA', 'PRL', 'PRMT5', 'PRNP', 'PROM1', 'PSAT1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTCHD3', 'PTEN', 'PTF1A', 'PTGS2', 'PTHLH', 'PTH', 'PTK2', 'PTK6', 'PTPN11', 'PTPRCAP', 'PTPRC', 'PXN', 'RAD51', 'RAF1', 'RALA', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RBX1', 'RCC1', 'RELA', 'RELB', 'REL', 'REM1', 'RET', 'RHEB', 'RHOA', 'RHOC', 'RICTOR', 'RNASE1', 'DROSHA', 'RND3', 'RNMT', 'ROCK1', 'RPRD1B', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KA6', 'RPS6KB1', 'RPS6', 'RPTOR', 'RREB1', 'RSF1', 'RUNX1', 'RUNX2', 'RUNX3', 'SDC1', 'SDHC', 'SENP1', 'SERPINE1', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHC1', 'SHFM1', 'SHH', 'SIRT1', 'SIX1', 'SIX3', 'SKP1', 'SKP2', 'SLC25A16', 'SLC25A6', 'SLC2A1', 'SLC35B2', 'SLC39A4', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMO', 'SNAI1', 'SNAI2', 'SNCA', 'SNIP1', 'SNW1', 'SNX33', 'SOCS3', 'SOX11', 'SOX17', 'SOX2', 'SOX4', 'SOX6', 'SOX9', 'SP1', 'SPN', 'SPP1', 'SPRY1', 'SRC', 'SREBF1', 'STAT1', 'STAT3', 'STAT4', 'STAT5A', 'STAT5B', 'STAT6', 'STC2', 'STIM1', 'STK11', 'STK24', 'STMN1', 'SUFU', 'SULF2', 'SUV39H1', 'TAF1', 'TBP', 'TBX2', 'TCEAL7', 'TCF4', 'TCF7L2', 'TCF7', 'TERT', 'TET3', 'TFDP1', 'TFF1', 'TGFA', 'TGFB1', 'TGFBR2', 'THBS1', 'THRA', 'THRB', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLR9', 'TM4SF1', 'TMPRSS4', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF8', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP2A', 'TP53', 'TP63', 'TP73', 'TRPV2', 'TSC22D3', 'TSC2', 'TWIST1', 'TXN', 'TYMS', 'UBA52', 'UBA7', 'UBB', 'UBC', 'UBE2C', 'UBTF', 'URGCP', 'USP18', 'USP2', 'USP9X', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VIP', 'VRK1', 'WDR77', 'WDTC1', 'WEE1', 'WHSC1', 'WIF1', 'WISP1', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'XBP1', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YY1', 'ZBTB17', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 9.391823691280716e-16 NRMSE: 5.646092803549745e-16 MAPE: 2.5879086759576717e-12 Pearson Correlation: 0.05675439643902213 Spearman Correlation: 0.06804823002780584 Coefficient of Determination: -2.956844621045597 RMSE: 0.4172101968264351 NRMSE: 0.39533624252739435 MAPE: 882.6008237321923 Predictor: ElasticNet Pearson Correlation: 0.679603672359493 Spearman Correlation: 0.6516823419801234 Coefficient of Determination: 0.41655645201791713 RMSE: 0.18687703543887135 NRMSE: 0.11234506945862822 MAPE: 491.08242286861594 Pearson Correlation: 0.2923034289995094 Spearman Correlation: 0.2710682178082021 Coefficient of Determination: 0.0683481558463026 RMSE: 0.20244508621960974 NRMSE: 0.19183107295311394 MAPE: 300.6890032789436 Predictor: RandomForests Pearson Correlation: 0.5772177113737843 Spearman Correlation: 0.550204785406144 Coefficient of Determination: 0.2845960696954034 RMSE: 0.2069341540942244 NRMSE: 0.12440282916775343 MAPE: 487.8931361371988 Pearson Correlation: 0.39246457786917033 Spearman Correlation: 0.3719772066983379 Coefficient of Determination: 0.14342072936184758 RMSE: 0.1941172794591912 NRMSE: 0.18393988558952287 MAPE: 348.3674372115515 Protein: ERBB2 Protein Interaction Partners Count: 663 x_train_column_count: 657 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACPP', 'ACTA2', 'ACTB', 'ACTG1', 'ADAM10', 'ADAM17', 'ADRB2', 'AFP', 'AGRN', 'AKT1S1', 'AKT1', 'AKT2', 'ALB', 'ALDH1A1', 'ALK', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'ANO1', 'ANXA2', 'ANXA5', 'AP2B1', 'APP', 'AREG', 'ARHGEF11', 'ARHGEF12', 'ARID1A', 'ARL6IP5', 'AR', 'ATM', 'ATP2B2', 'AURKB', 'AXIN1', 'BAG1', 'BARD1', 'BCAR1', 'BCAR3', 'BCAS1', 'BCL2L11', 'BCL2L1', 'BDNF', 'BECN1', 'BEST1', 'BIRC5', 'BLNK', 'BMI1', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BSG', 'BTC', 'MIEN1', 'CA9', 'CALU', 'CARTPT', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAV1', 'CBLB', 'CBLC', 'CBL', 'CCL27', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD19', 'CD22', 'CD247', 'CD24', 'CD274', 'CD28', 'CD33', 'CD34', 'CD44', 'CD46', 'CD52', 'CD68', 'CD6', 'CD80', 'CD82', 'CDC37', 'CDC42', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK4', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CEACAM5', 'CEP70', 'CHEK2', 'CHGA', 'CHKA', 'CHKB', 'CISH', 'CLDN3', 'CLDN4', 'CLDN7', 'CLTC', 'CNN1', 'COPS5', 'CPNE3', 'CREB1', 'CRKL', 'CRK', 'YBX3', 'CSF1', 'CSF2', 'CSF3', 'CSK', 'CSPG4', 'CTAG1B', 'CTLA4', 'CTNNB1', 'CTNND1', 'CTSB', 'CTSD', 'CTTN', 'CUL5', 'CXCL12', 'CXCR1', 'CXCR4', 'CYCS', 'CYP19A1', 'CYTIP', 'DCN', 'DDX41', 'DDX53', 'DHH', 'DIAPH1', 'DICER1', 'DLG4', 'DMTF1', 'DNAJA3', 'DNM2', 'DNMT1', 'DOCK1', 'DOCK7', 'DUSP6', 'E2F1', 'E2F3', 'EEA1', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EGFR', 'EGF', 'EIF3A', 'EIF4EBP1', 'EIF4E', 'ELAVL1', 'ELF3', 'EML4', 'ENO2', 'EP300', 'EPCAM', 'EPGN', 'EPHA2', 'EPS15', 'EPX', 'ERAL1', 'ERBB2IP', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ERRFI1', 'ESCO1', 'ESR1', 'ESR2', 'ESRRB', 'ETS1', 'ETS2', 'ETV4', 'ETV6', 'EZH2', 'EZR', 'FASLG', 'FASN', 'FBXW7', 'FCGR1A', 'FCGR1B', 'FCGRT', 'FGF10', 'FGF13', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FIGF', 'FLT1', 'FLT3LG', 'FN1', 'FOLH1', 'FOLR1', 'FOS', 'FOXA1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXP3', 'FREM2', 'FSIP1', 'FYN', 'GAB1', 'GABPB1', 'GAPDH', 'GATA3', 'GATA4', 'GDF2', 'GLI1', 'GLI2', 'GLS', 'GNA11', 'GNAQ', 'GNAS', 'GNRH1', 'GPER1', 'GRAP2', 'GRB2', 'GRB7', 'GSTP1', 'GZMB', 'H2AFX', 'H2AFY', 'HBEGF', 'HDAC1', 'HDAC6', 'HEATR6', 'HGF', 'HIF1A', 'HK1', 'HLA-A', 'HMGA2', 'HNF4A', 'HOXB7', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPG2', 'ICAM1', 'ID1', 'IDH1', 'IDH2', 'IFNG', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IHH', 'IL10', 'IL2', 'IL4', 'IL6R', 'IL6ST', 'IL6', 'CXCL8', 'ILK', 'INPP4B', 'INS', 'IQGAP1', 'IQSEC1', 'IRS1', 'ITGA5', 'ITGA6', 'ITGAV', 'ITGB1', 'ITGB3', 'ITGB4', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JUN', 'JUP', 'KDR', 'KITLG', 'KLK3', 'KLRK1', 'KRAS', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'L1CAM', 'LAMP1', 'LCN2', 'LDHA', 'LEP', 'LIN28A', 'LIN7A', 'LIN7B', 'LIN7C', 'LINGO1', 'LOX', 'LRIG1', 'LRPPRC', 'MAGEA1', 'MAGEA3', 'MAGED4B', 'MAGED4', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK8', 'MATK', 'MCL1', 'MDK', 'MDM2', 'MEMO1', 'MET', 'MGMT', 'MKI67', 'MLANA', 'MLH1', 'KMT2C', 'MME', 'MMP11', 'MMP14', 'MMP16', 'MMP1', 'MMP2', 'MMP7', 'MMP9', 'MPP1', 'MRAP', 'MRAS', 'MSH2', 'MSH6', 'MSLN', 'MTA1', 'MTOR', 'MUC13', 'MUC16', 'MUC1', 'MUC4', 'MUC6', 'MUCL1', 'MYBL2', 'MYCN', 'MYC', 'NANOG', 'NCAM1', 'NCL', 'NCOA1', 'NCOA3', 'NCOR1', 'NDRG1', 'NF1', 'NF2', 'NFE2L2', 'NGF', 'NISCH', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NR1H4', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NRP1', 'NTF3', 'NTF4', 'OPCML', 'OSMR', 'PA2G4', 'PADI2', 'PAK1', 'PALB2', 'PAQR3', 'PARP1', 'PAX2', 'PCSK9', 'PDCD1LG2', 'PDCD1', 'PDCD4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PDGFRA', 'PDPN', 'PECAM1', 'PELP1', 'PEPD', 'PFKFB3', 'PGAP3', 'PGF', 'PGR', 'PI3', 'PIK3C2A', 'PIK3C2B', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIN1', 'PIP', 'PLAUR', 'PLAU', 'PLCG1', 'PLCG2', 'PLEK', 'PLG', 'PLXNB1', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPP3CA', 'PRDM10', 'PRF1', 'PRKACA', 'PRL', 'PROM1', 'PSCA', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'PTPN1', 'PTPRC', 'PTPRO', 'PTPRU', 'PTS', 'PXN', 'RAB25', 'RAD51', 'RAF1', 'RANBP2', 'RARA', 'RASA1', 'RASA2', 'RASSF1', 'RB1', 'RBPJ', 'RDX', 'RECK', 'REM1', 'REN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'S100A14', 'SCGB2A2', 'SCUBE2', 'SDC1', 'SDHC', 'SEMA3D', 'SEMA4D', 'SERPINB5', 'SERPINE1', 'SFRP1', 'PEAK1', 'SH3BGRL3', 'SH3BGRL', 'SH3TC2', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SIAH2', 'PMEL', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC4A7', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SMUG1', 'SMYD3', 'SNAI1', 'SNAI2', 'SOCS1', 'SOS1', 'SOX10', 'SOX2', 'SOX9', 'SP3', 'SPP1', 'SPRY2', 'SRCIN1', 'SRC', 'STARD3', 'STAT1', 'STAT2', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STOM', 'STUB1', 'SYP', 'TAGLN', 'TBX1', 'TERT', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TFRC', 'TGFA', 'TGFB1', 'THBS1', 'THRA', 'TIMP1', 'TJP1', 'TMPRSS2', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF4', 'TNFRSF8', 'TNFRSF9', 'TNFSF11', 'TNF', 'TNS1', 'TNS3', 'TNS4', 'TOB1', 'TOP1', 'TOP2A', 'TP53', 'TP63', 'TSC2', 'TWIST1', 'TYMS', 'TYR', 'UBA52', 'UBB', 'UBC', 'USP2', 'USP9X', 'VAV1', 'VAV2', 'VAV3', 'VCL', 'VEGFA', 'VEGFB', 'VEGFC', 'VIM', 'WASL', 'WDFY2', 'WDTC1', 'WNT10A', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7B', 'WNT9A', 'WNT9B', 'WT1', 'WWOX', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YES1', 'YY1', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.978561197078068e-15 NRMSE: 6.778133800838319e-16 MAPE: 9.605183540139501e-12 Pearson Correlation: 0.5788065028325967 Spearman Correlation: 0.514465909133817 Coefficient of Determination: -0.5876747063818508 RMSE: 1.343873456793647 NRMSE: 0.24241890771225325 MAPE: 556.5919878789863 Predictor: ElasticNet Pearson Correlation: 0.9352996884680241 Spearman Correlation: 0.8656764581179156 Coefficient of Determination: 0.8684432909833957 RMSE: 0.3559012713280782 NRMSE: 0.06063363908344178 MAPE: 304.7511325422307 Pearson Correlation: 0.8361183838745928 Spearman Correlation: 0.7398355837804025 Coefficient of Determination: 0.6895968089709279 RMSE: 0.5942110200041879 NRMSE: 0.10718865358326501 MAPE: 197.981481411887 Predictor: RandomForests Pearson Correlation: 0.846909847073551 Spearman Correlation: 0.6820627790893955 Coefficient of Determination: 0.7100735211474967 RMSE: 0.5283442429324748 NRMSE: 0.0900121374060812 MAPE: 551.3013161115801 Pearson Correlation: 0.8508230084019966 Spearman Correlation: 0.7038602771063124 Coefficient of Determination: 0.7193829313808946 RMSE: 0.5649820563125258 NRMSE: 0.10191609356961648 MAPE: 198.11534034275425 Protein: ERBB3 Protein Interaction Partners Count: 245 x_train_column_count: 247 x_train columns: ['ADAM17', 'AGRN', 'AGTR2', 'AKT1', 'AKT2', 'AKT3', 'ALAS2', 'ALB', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'APIP', 'AREG', 'AR', 'BAMBI', 'BDNF', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BTC', 'CADM4', 'CASK', 'CASP3', 'CBLB', 'CBLC', 'CBL', 'CCND1', 'CCNE1', 'CD44', 'CD82', 'CDC42', 'CDH1', 'CDK4', 'CDK5', 'CDKN1B', 'CDKN2A', 'CLEC16A', 'COMMD5', 'COQ7', 'CRKL', 'CRK', 'CRYZL1', 'CSF1', 'CSK', 'CSPG5', 'CTNNB1', 'DCN', 'DHH', 'DOCK7', 'DUSP6', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EIF4EBP1', 'EIF4E', 'EML4', 'EPCAM', 'EPGN', 'EPN1', 'ERBB2IP', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'ESR2', 'FBXO9', 'FGF10', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FIGF', 'FKBP14', 'FLNA', 'FLT3LG', 'FN1', 'FOXA1', 'FOXO3', 'FREM2', 'FTSJ1', 'GAB1', 'GAPDH', 'GLE1', 'GRB2', 'GRB7', 'GRHL2', 'HBEGF', 'HGF', 'HGS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPG2', 'IGF1', 'IGF2', 'IL6ST', 'ILK', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'ITPKB', 'JAK1', 'JAK2', 'JUN', 'KDR', 'KITLG', 'KRAS', 'L1CAM', 'LAMA1', 'LAMB1', 'LAMC2', 'LIN7A', 'LIN7B', 'LIN7C', 'LRIG1', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARCH7', 'MDM2', 'MET', 'MITF', 'MMP9', 'MRPL49', 'MTOR', 'MUC1', 'MUC4', 'MYC', 'N4BP1', 'NDRG1', 'NEDD4L', 'NEDD4', 'NF1', 'NGF', 'NICN1', 'NOTCH1', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NTF3', 'NTF4', 'OAT', 'PA2G4', 'PARK7', 'PCSK9', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PGR', 'PI3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIP5K1C', 'PLCG1', 'PLCG2', 'PPP1R9A', 'PRKACA', 'PTEN', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN22', 'PTPN2', 'RASA1', 'RASA2', 'REM1', 'RGS4', 'RHOA', 'RHOC', 'RNF41', 'ROR1', 'RRAS2', 'SH2B3', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SLC25A16', 'SMAD4', 'SNAI2', 'SOS1', 'SOX10', 'SOX2', 'SPARC', 'SPRY2', 'SRC', 'STAT3', 'STAT5A', 'STAT5B', 'SYN3', 'TCF7L2', 'TGFA', 'TMEFF2', 'TNFRSF13C', 'TNS1', 'TP53', 'USP8', 'VAV1', 'VAV2', 'VAV3', 'VEGFA', 'VEGFB', 'VEGFC', 'WNT1', 'WNT5A', 'ZEB1', 'ZNF217', 'KRBOX4', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.7761325970082845 Spearman Correlation: 0.7743758752711548 Coefficient of Determination: 0.6023818081388239 RMSE: 0.28438971721116135 NRMSE: 0.10311933383776659 MAPE: 179.54949420662936 Pearson Correlation: 0.15343451130470845 Spearman Correlation: 0.22196037357074283 Coefficient of Determination: -0.43664162260426176 RMSE: 0.5929734235721918 NRMSE: 0.1648636751434467 MAPE: 216.14371404470285 Predictor: ElasticNet Pearson Correlation: 0.6677276178474405 Spearman Correlation: 0.6607009967793842 Coefficient of Determination: 0.4248863417351273 RMSE: 0.34202480755600884 NRMSE: 0.12401774106684102 MAPE: 198.62129432521147 Pearson Correlation: 0.2770941899952012 Spearman Correlation: 0.3015474008404095 Coefficient of Determination: 0.024021037652082855 RMSE: 0.4887437705692261 NRMSE: 0.13588483229838771 MAPE: 161.4277060974986 Predictor: RandomForests Pearson Correlation: 0.5700111679315052 Spearman Correlation: 0.598007350486268 Coefficient of Determination: 0.30672257699633665 RMSE: 0.3755210573064074 NRMSE: 0.13616343674879794 MAPE: 234.93540337334667 Pearson Correlation: 0.36952256040669623 Spearman Correlation: 0.3672639309717079 Coefficient of Determination: 0.11045540866504089 RMSE: 0.4666001440422716 NRMSE: 0.12972826691937767 MAPE: 157.5268378840568 Fold: 4 Protein: RB1 Protein Interaction Partners Count: 369 x_train_column_count: 366 x_train columns: ['AATF', 'ABCC1', 'ABL1', 'ACTL6A', 'ACTL6B', 'AFAP1', 'AHR', 'AKT1', 'ANXA5', 'ARID1A', 'ARID1B', 'ARID4A', 'ARMCX1', 'ARMCX2', 'ARMCX3', 'ARNT', 'AR', 'ASF1A', 'ATF2', 'ATM', 'AURKB', 'BCR', 'BDP1', 'BGLAP', 'BRCA1', 'BRF1', 'FAM208A', 'C4BPA', 'CABIN1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CBFB', 'CBX1', 'CBX4', 'CBX5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNT2', 'CDC25A', 'CDC27', 'CDC6', 'CDH1', 'CDK14', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPA', 'CEBPB', 'CEBPD', 'CEBPE', 'CHEK1', 'CHEK2', 'CLNK', 'COL1A1', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUX1', 'DCAF10', 'DGKZ', 'DNAJA3', 'DNMT1', 'DNMT3A', 'DUSP1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EGFR', 'EGF', 'EID1', 'EIF2AK1', 'EIF2AK4', 'AGO2', 'ELF1', 'ENC1', 'EP300', 'ERBB2', 'ESD', 'ESR1', 'ESR2', 'EZH2', 'FBXW7', 'FMO5', 'FOS', 'FOXM1', 'FRK', 'FZR1', 'G6PD', 'GAPDH', 'GATA1', 'GJA1', 'GNB2L1', 'GRB2', 'GSC', 'GTF2H1', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HARS2', 'HARS', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC8', 'HDC', 'HES1', 'HIF1A', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HIST4H4', 'HMGA1', 'HMGA2', 'HRAS', 'HSP90AA1', 'HSPA1A', 'HSPA8', 'ID2', 'IFI16', 'INS', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'KDM2A', 'KDM4A', 'KDM5A', 'KDM5B', 'PPP1R26', 'KIF11', 'KRAS', 'KRT10', 'KRT14', 'KRT5', 'L3MBTL2', 'L3MBTL1', 'LIMD1', 'LIN52', 'LIN54', 'LIN9', 'LMNA', 'LOR', 'LPAR6', 'MAF', 'MAP2K7', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEF2C', 'MORF4L1', 'MRFAP1', 'MRPL11', 'MRPS18B', 'MSH6', 'MTL5', 'MYBL2', 'MYC', 'MYOD1', 'NACC2', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NCR1', 'NDC80', 'NEO1', 'NFYA', 'NFYB', 'NFYC', 'NGF', 'NOTCH1', 'NPM1', 'NRAS', 'ORC1', 'PA2G4', 'PAX2', 'PAX3', 'PAX5', 'PAX6', 'PAX8', 'PCNA', 'PELP1', 'PGR', 'PHB', 'PHF21B', 'PIAS4', 'PIK3CA', 'PIK3R1', 'PIK3R3', 'PLK1', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPIA', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP1R3A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R3B', 'PPRC1', 'PRB1', 'PRB3', 'PRB4', 'PRDM2', 'PRH1', 'PRH2', 'PRIM1', 'PRIM2', 'PRKCB', 'PRMT2', 'PSMA7', 'PSMC1', 'PSMD10', 'PTEN', 'PTGDR', 'RAF1', 'RB1CC1', 'RBAK', 'RBBP4', 'RBBP5', 'RBBP6', 'RBBP7', 'RBBP8', 'RBBP9', 'RBL1', 'RBL2', 'RBFOX2', 'RFC1', 'RPS6KB1', 'RUNX2', 'S100A6', 'SETD1B', 'SETD7', 'SIRT1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMC1A', 'SMC2', 'SMC4', 'SMC5', 'SMYD2', 'SNW1', 'SP100', 'SP1', 'SP3', 'SPI1', 'STAM', 'STAT3', 'SUV39H1', 'SUV420H2', 'SUZ12', 'TAF1', 'TBP', 'TERT', 'TFAP2A', 'TFDP1', 'TFDP3', 'TGM2', 'THAP1', 'TMPO', 'TNS1', 'TOP2A', 'TP53BP1', 'TP53', 'TP73', 'TRDMT1', 'TRIM27', 'TTK', 'UBE2I', 'UBE3A', 'UBL4A', 'UBN1', 'UBR4', 'UBTF', 'UHRF1', 'USP4', 'USP7', 'VEGFA', 'VPS39', 'WDR59', 'WDR73', 'WEE1', 'WWTR1', 'YAP1', 'YY1', 'ZBTB16', 'ZBTB7A', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.8268703350763363 Spearman Correlation: 0.7578241515973115 Coefficient of Determination: 0.6837145510292525 RMSE: 0.14144783714612358 NRMSE: 0.05172902177666895 MAPE: 333.9895480876382 Pearson Correlation: -0.06973641674376374 Spearman Correlation: -0.039344630232297166 Coefficient of Determination: -12.60072635317127 RMSE: 0.6080722966938907 NRMSE: 0.5826009817708684 MAPE: 953.2028453788067 Predictor: ElasticNet Pearson Correlation: 0.5136311087295942 Spearman Correlation: 0.4907078994577548 Coefficient of Determination: 0.2242427076122402 RMSE: 0.2215234152787752 NRMSE: 0.08101353689247191 MAPE: 212.24271703851406 Pearson Correlation: 0.003386370723155847 Spearman Correlation: 0.10622825721018966 Coefficient of Determination: -0.258958165821392 RMSE: 0.18500344514664344 NRMSE: 0.17725390444433703 MAPE: 141.18205214003075 Predictor: RandomForests Pearson Correlation: 0.5793800457140716 Spearman Correlation: 0.4352192694372206 Coefficient of Determination: 0.1884714823993323 RMSE: 0.2265732310234822 NRMSE: 0.08286030976575563 MAPE: 177.20290416760355 Pearson Correlation: 0.0526387952800828 Spearman Correlation: 0.13829848252471977 Coefficient of Determination: -0.12007331950836031 RMSE: 0.17450078803985147 NRMSE: 0.16719118924601567 MAPE: 121.55710028496003 Protein: CDH1 Protein Interaction Partners Count: 834 x_train_column_count: 826 x_train columns: ['ABCB1', 'ABCG2', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTR3', 'ACVR1B', 'ADAM10', 'ADAM15', 'ADAM17', 'ADAM9', 'AFP', 'AIMP1', 'AJAP1', 'AKAP9', 'AKT1', 'AKT2', 'AKTIP', 'ALB', 'ALCAM', 'ALDH1A1', 'ALDH3A1', 'ALK', 'AMOTL2', 'ANAPC4', 'ANAPC7', 'ANO1', 'ANXA2', 'ANXA5', 'AP1M1', 'AP1M2', 'APC2', 'APC', 'AQP1', 'AQP5', 'AREG', 'ARF6', 'ARHGAP31', 'ARID1A', 'ARL2BP', 'ARMC7', 'ARPC1A', 'ARPC2', 'ARRB2', 'ARVCF', 'AR', 'CLMP', 'ASF1A', 'ATF2', 'ATF3', 'ATM', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BAG3', 'BANP', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL6B', 'BCL9L', 'BCORL1', 'BMI1', 'BMP2', 'BMP4', 'BMP6', 'BMP7', 'BNIP3', 'BRCA1', 'BRCA2', 'BSG', 'BTBD7', 'BTC', 'BTF3', 'ANAPC15', 'CA2', 'CA9', 'CALCA', 'CALR', 'CAPN1', 'CAPNS1', 'CASP3', 'CASP8', 'CASP9', 'CASS4', 'CAV1', 'CBLL1', 'CBL', 'CBX7', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CCR7', 'CD1A', 'CD1B', 'CD1C', 'CD1E', 'CD207', 'CD24', 'CD274', 'CD276', 'CD2AP', 'CD34', 'CD44', 'CD46', 'CD68', 'CD82', 'CDC16', 'CDC23', 'CDC27', 'CDC42', 'CDC6', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH24', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK14', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN3', 'CDX2', 'CEACAM5', 'CFL1', 'CGN', 'CHGA', 'CHL1', 'CLCA2', 'CLDN1', 'CLDN2', 'CLDN3', 'CLDN4', 'CLDN5', 'CLDN7', 'CNTN1', 'COL1A1', 'CORO1C', 'CRB3', 'CREB1', 'CREBBP', 'CRYAB', 'YBX3', 'CSDC2', 'CSE1L', 'CSF2', 'CSNK2A1', 'CSNK2A2', 'CST5', 'CTBP1', 'CTBP2', 'CTCF', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTSL', 'CTTN', 'CXCL12', 'CXCL1', 'CXCR4', 'CYP1B1', 'DAAM1', 'DAB2IP', 'DACH1', 'DAPK1', 'DAP', 'DDR1', 'DDR2', 'DDX3X', 'DICER1', 'DKK1', 'DLC1', 'DLG1', 'DLG5', 'DNM2', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOT1L', 'DPAGT1', 'DPEP1', 'DSP', 'DUOX1', 'DUSP4', 'DVL1', 'DVL2', 'E2F1', 'ECT2', 'EDN1', 'EFEMP1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'EHD1', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'ELAVL1', 'ELF3', 'ENAH', 'ENG', 'EP300', 'EPB41L3', 'EPCAM', 'EPHA10', 'EPHA1', 'EPHA2', 'EPPK1', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ESRP1', 'ESRP2', 'ETS1', 'ETS2', 'EXOC3', 'EXOC4', 'EYA2', 'EZH2', 'EZR', 'F11R', 'F2RL2', 'SUPT20H', 'FBXL5', 'FER', 'FGF10', 'FGF13', 'FGF17', 'FGF19', 'FGF2', 'FGF4', 'FGF5', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FMN1', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC1', 'FOXC2', 'FOXJ2', 'FOXK2', 'FOXL1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXQ1', 'FRMPD2', 'FSCN1', 'FUT4', 'FXYD5', 'FYN', 'FZD1', 'FZD4', 'FZD7', 'FZR1', 'G6PD', 'GAB2', 'GABPA', 'GADD45A', 'GAPDH', 'GAS6', 'GATA1', 'GATA3', 'GATA4', 'GATA6', 'GDNF', 'GFRA1', 'GGT1', 'GJA1', 'GJB1', 'GJB2', 'GKN2', 'GLI1', 'GLI2', 'GMNN', 'GNA12', 'GNA13', 'GNB2L1', 'GNL3', 'GPA33', 'GRB2', 'GRHL2', 'GRHL3', 'GSK3B', 'GSN', 'GSTP1', 'H2AFZ', 'HAVCR2', 'HBEGF', 'HDAC1', 'HDAC2', 'HEPACAM', 'HES1', 'HGF', 'HGS', 'HIF1A', 'HMGA2', 'HNF4A', 'HOXB4', 'HOXD10', 'HPGDS', 'HPGD', 'HRAS', 'HSP90AA1', 'HSPA5', 'ICAM1', 'ID1', 'ID2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP3', 'IL10', 'IL15', 'IL17A', 'IL1B', 'IL24', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IQSEC1', 'IRS1', 'IRS2', 'ITGA5', 'ITGA6', 'ITGAE', 'ITGAM', 'ITGB1', 'ITGB4', 'ITGB7', 'ITPKB', 'IVL', 'JAG1', 'JAK2', 'AJUBA', 'JUN', 'JUP', 'KDM1A', 'KDM6A', 'KDR', 'KEAP1', 'KIFC3', 'KIT', 'KLF4', 'KLF5', 'KLF8', 'KLK3', 'KLK7', 'KLRG1', 'KRAS', 'KRT10', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'KRT9', 'LAMA1', 'LAMB1', 'LAMC2', 'LASP1', 'LATS1', 'LATS2', 'LCN2', 'LEF1', 'LEP', 'LGALS3', 'LGALS4', 'LGALS9', 'LGR5', 'LIF', 'LIMA1', 'LIN28A', 'LIPG', 'LLGL2', 'LMNA', 'LOR', 'LOXL2', 'LOXL3', 'LOX', 'LRP5', 'LRP6', 'LY6K', 'MACC1', 'MACROD1', 'MAD2L2', 'MAGI1', 'MAP2K1', 'MAP2K7', 'MAP4K5', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARK2', 'MARVELD2', 'MCAM', 'MCL1', 'MDM2', 'MED1', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGAT5', 'MGMT', 'MKI67', 'MLH1', 'MLLT4', 'MME', 'MMP11', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP1', 'MMP25', 'MMP27', 'MMP2', 'MMP3', 'MMP7', 'MMP8', 'MMP9', 'MPP5', 'MRAP', 'MSH2', 'MSN', 'MT1G', 'MTA1', 'MTA3', 'MTBP', 'MTDH', 'MTOR', 'MUC1', 'MUC4', 'MYCN', 'MYC', 'MYH6', 'MYO6', 'MYO7A', 'NANOG', 'NCAM1', 'NCOA1', 'NCSTN', 'NDRG1', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEUROG3', 'NF2', 'NFE2L2', 'NFIC', 'NKD2', 'NKX2-1', 'NKX6-1', 'NKX6-2', 'NME1', 'NOG', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NR2F1', 'NRP2', 'NUDT21', 'NUMBL', 'NUMB', 'NUP98', 'NUTF2', 'OTUB1', 'OVOL1', 'OVOL2', 'PARD3', 'PARD6A', 'PAX2', 'PAX5', 'PAX6', 'PAX8', 'PCSK9', 'PDCD4', 'PDGFRB', 'PDPN', 'PEBP1', 'PECAM1', 'PGR', 'PHLPP1', 'PI3', 'PIK3CA', 'PIK3R1', 'PIP5K1A', 'PIP5K1C', 'PIP', 'PIR', 'PITX1', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAUR', 'PLAU', 'PLCD1', 'PLEKHA7', 'PLG', 'PODXL', 'POLR2C', 'POSTN', 'POTEF', 'POU5F1', 'PPARA', 'PPARGC1A', 'PPARG', 'PPL', 'PPP6C', 'PRAME', 'PRDM10', 'PRKAR1A', 'PRKCA', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRKG1', 'PRMT5', 'PROC', 'PROM1', 'PRSS8', 'PSEN1', 'PTCH1', 'PTEN', 'PTF1A', 'PTGS2', 'PTK2', 'PTPN11', 'PTPN14', 'PTPRC', 'PTPRF', 'PTPRJ', 'PTPRM', 'PTPRS', 'PTPRT', 'PTPRU', 'PTRH2', 'PVRL1', 'PVRL2', 'PVR', 'PXN', 'RAB11A', 'RAB25', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RACGAP1', 'RAF1', 'RALA', 'RALBP1', 'RALGDS', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RARB', 'RASSF1', 'RB1', 'RBM4', 'RCOR1', 'RDX', 'REM1', 'RET', 'RHOA', 'RHOB', 'RHOC', 'RHOD', 'RICTOR', 'RND3', 'ROCK1', 'ROCK2', 'RPS6KB1', 'RPTOR', 'RRM2', 'RUNX2', 'RUNX3', 'S100A14', 'S100A4', 'S100A8', 'SATB1', 'SCRIB', 'SDC1', 'SDC4', 'SDHC', 'SELE', 'SELL', 'SELP', 'SEMA3C', 'SEMA3F', 'SENP1', 'SERPINB4', 'SERPINB5', 'SERPINE1', 'SFN', 'SFRP1', 'SFRP2', 'SFTPC', 'SHH', 'SIK1', 'SIN3A', 'SIRT1', 'SIRT2', 'SIRT4', 'SIRT7', 'SIX1', 'SIX2', 'SKIL', 'SKP2', 'SLC2A1', 'SLC39A6', 'SLC6A3', 'SLC9A3R1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SNAI1', 'SNAI2', 'SNAI3', 'SNX16', 'SNX1', 'SOX10', 'SOX17', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPARC', 'SPDEF', 'SPINT1', 'SPP1', 'SPRY1', 'SRCIN1', 'SRC', 'SRXN1', 'ST14', 'ST7L', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STX4', 'STYK1', 'SUCLG2', 'SUMO1', 'SUZ12', 'SYNJ2', 'SYP', 'TACC3', 'TACSTD2', 'TATDN1', 'TBX1', 'TBX3', 'TCF15', 'TCF4', 'TDGF1', 'TERT', 'TET2', 'TFF1', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBI', 'TGFBR1', 'TGFBR2', 'THBS1', 'THEM4', 'THUMPD1', 'THY1', 'TIAM1', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLN1', 'TLR4', 'TMPRSS2', 'TMPRSS4', 'TNFRSF6B', 'TNF', 'TNK2', 'TNS1', 'TP53BP1', 'TP53BP2', 'TP53', 'TRIM21', 'TRIM29', 'TRIM44', 'TRIP10', 'TRPS1', 'TSPYL2', 'TWIST1', 'TWIST2', 'TYRP1', 'T', 'UBE2I', 'UBE2S', 'USP48', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VEZT', 'VHL', 'VIM', 'VIPAS39', 'VPS33B', 'VTN', 'WASL', 'WDFY2', 'WDTC1', 'WIF1', 'WISP1', 'WISP3', 'WNT10A', 'WNT10B', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT9A', 'WNT9B', 'WT1', 'XIAP', 'YAP1', 'YBX1', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.006093404834025e-15 NRMSE: 6.378926475007204e-16 MAPE: 3.080229146179914e-12 Pearson Correlation: 0.1817469326691653 Spearman Correlation: 0.15179491016097457 Coefficient of Determination: -1.9995487559499154 RMSE: 2.020193730178947 NRMSE: 0.3664949983997219 MAPE: 1011.5270882416661 Predictor: ElasticNet Pearson Correlation: 0.8930100760884667 Spearman Correlation: 0.8615750721418307 Coefficient of Determination: 0.7783151727107709 RMSE: 0.5268687722659561 NRMSE: 0.08389362954459349 MAPE: 251.57699470729673 Pearson Correlation: 0.5033513101805546 Spearman Correlation: 0.4869013329343259 Coefficient of Determination: 0.20020936312097626 RMSE: 1.0431654962974326 NRMSE: 0.189246670348941 MAPE: 501.7113727952967 Predictor: RandomForests Pearson Correlation: 0.753766769231701 Spearman Correlation: 0.7342746966759073 Coefficient of Determination: 0.5625251504145368 RMSE: 0.7401351311327643 NRMSE: 0.11785215934727623 MAPE: 216.7168265193337 Pearson Correlation: 0.7698116589512704 Spearman Correlation: 0.5021041435734319 Coefficient of Determination: 0.5286020434695378 RMSE: 0.8008642433908563 NRMSE: 0.14528940230594975 MAPE: 166.4565667458046 Protein: CDH2 Protein Interaction Partners Count: 472 x_train_column_count: 467 x_train columns: ['ABCG2', 'ABL1', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTR3', 'ADAM10', 'ADH1A', 'AFP', 'AHSG', 'AKT1', 'AKT3', 'ALB', 'ALCAM', 'ALDH1A1', 'AMBN', 'AMELX', 'AMOTL1', 'AMTN', 'ANGPT1', 'ANO8', 'ANXA5', 'APC2', 'APC', 'APLP2', 'APOA1', 'APOA2', 'APOA5', 'APOB', 'APOE', 'APOL1', 'APPL1', 'APP', 'ARHGAP32', 'ARMC7', 'ARPC5', 'ARVCF', 'AR', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BCL2L1', 'BDNF', 'BMI1', 'BMP15', 'BMP2', 'BMP4', 'BMP7', 'BNIP2', 'BOC', 'BPIFB2', 'RGCC', 'GSKIP', 'C3', 'C4A', 'CABLES1', 'CADM1', 'CALU', 'CASP3', 'CAV1', 'CBLL1', 'CCNA2', 'CCNB1', 'CCND1', 'CD24', 'CD34', 'CD44', 'CD80', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK4', 'CDK5', 'CDK6', 'CDKN2A', 'CDON', 'CDX2', 'CEBPZ', 'CFL1', 'CHGB', 'CHL1', 'CHRDL1', 'CKAP4', 'CLDN11', 'CLDN3', 'CLDN4', 'CLDN7', 'CORT', 'CP', 'CREBBP', 'CRP', 'CSF1', 'CSK', 'CST3', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTTN', 'CXCL12', 'CXCR4', 'CYLD', 'CYR61', 'DBN1', 'DDR1', 'DDR2', 'DKK1', 'DLG4', 'DLG5', 'DMP1', 'DNAJC3', 'DSP', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EFNB2', 'EFNB3', 'EGFR', 'EGF', 'EHMT2', 'EIF2AK3', 'ENAM', 'ENG', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA4', 'EPHB2', 'EPS8', 'ERBB2', 'ERBB4', 'ESR1', 'ESRP1', 'EXOC4', 'EZH2', 'EZR', 'F11R', 'F5', 'EVA1A', 'FAM20A', 'FAM20C', 'FBN1', 'FER', 'FGA', 'FGF13', 'FGF23', 'FGF2', 'FGFR1', 'FGFR4', 'FGG', 'FN1', 'FOXC2', 'FOXD3', 'FOXO1', 'FOXP4', 'FSTL1', 'FSTL3', 'FUCA2', 'GAA', 'GAPDH', 'GAS6', 'GATA4', 'GFAP', 'GJA10', 'GJA1', 'GJA3', 'GJB6', 'GJC1', 'GJC3', 'GJD3', 'GJD4', 'GLI1', 'GOLM1', 'GPC3', 'GRIA1', 'GRIA2', 'HGF', 'HMGA2', 'HNF4A', 'HRAS', 'HRC', 'HSP90B1', 'HSPA5', 'IARS2', 'IGF1R', 'IGF1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL1B', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'INVS', 'IQGAP1', 'ISL1', 'ITGA6', 'ITGB1', 'ITIH2', 'ITPKB', 'JAG1', 'JAM3', 'JUN', 'JUP', 'KCNA5', 'KDR', 'KIAA2022', 'KIF5B', 'KIT', 'KLF4', 'KNG1', 'KRAS', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT8', 'KTN1', 'L1CAM', 'LAMB1', 'LAMB2', 'LAMC1', 'LEF1', 'LGALS1', 'LRP5', 'LRP6', 'LRRC7', 'LTBP1', 'LTBP3', 'MAP1B', 'MAP2K6', 'MAP2K7', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MATN3', 'MBTPS1', 'MCAM', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEPE', 'MET', 'MFGE8', 'MFI2', 'MGAT4A', 'MIA3', 'MKI67', 'MLLT4', 'MMP14', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MPDZ', 'MPP5', 'MRAP', 'MRPL49', 'MSLN', 'MSN', 'MTHFD1', 'MUC1', 'MUC4', 'MXRA8', 'MYC', 'MYO10', 'MZF1', 'NANOG', 'NCAM1', 'NCSTN', 'NDRG1', 'NENF', 'NES', 'NFASC', 'NGF', 'NKX2-5', 'NLGN1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTUM', 'NRCAM', 'NT5C', 'NT5E', 'NTRK2', 'NUCB1', 'NUMBL', 'NUMB', 'OLFM3', 'P4HB', 'PARD3', 'PAX6', 'PCSK9', 'PC', 'PDGFRB', 'PDIA4', 'PDIA6', 'PECAM1', 'PENK', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PITX2', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PNPLA2', 'POU5F1', 'PPT2', 'PRKCDBP', 'PRKCSH', 'PROC', 'PROM1', 'PRPH', 'PRSS23', 'PSEN1', 'PTEN', 'PTK2', 'PTPN11', 'PTPN1', 'PTPN2', 'PTPRC', 'PTPRS', 'PVRL1', 'PVRL2', 'PVRL3', 'PXN', 'QSOX1', 'RAB11FIP1', 'RAB3D', 'RAB5A', 'RAC1', 'RCN1', 'RELN', 'REM1', 'RHOA', 'RHOB', 'RHOC', 'ROBO1', 'PTBP3', 'RPS6KB1', 'RUNX2', 'S100A14', 'S100A4', 'SARS2', 'SCARB2', 'SCG2', 'SCG3', 'SDC2', 'SEMA3A', 'SENP3', 'SERPINA10', 'SERPINA1', 'SERPINC1', 'SERPIND1', 'SERPINE1', 'SHH', 'SHISA5', 'SIRT7', 'SKP1', 'SLC2A1', 'SLC9A3R1', 'SLIT1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SNAI1', 'SNAI2', 'SNAI3', 'SOX10', 'SOX18', 'SOX1', 'SOX2', 'SOX4', 'SOX9', 'SP7', 'SPAG9', 'SPARCL1', 'SPARC', 'SPP1', 'SPP2', 'SRC', 'ST6GALNAC5', 'STAT3', 'STC2', 'SYP', 'TBX1', 'TCF3', 'TEK', 'TF', 'TGFB1', 'TGFBR1', 'TGM2', 'TGOLN2', 'THY1', 'TIMP1', 'TJP1', 'TJP3', 'TMEM132A', 'TNC', 'TNF', 'TNNT1', 'TP53', 'TRPS1', 'TSC2', 'TWIST1', 'TWIST2', 'USP9X', 'VANGL2', 'VCAM1', 'VCAN', 'VCL', 'VEGFA', 'VGF', 'VIM', 'VTN', 'VWA1', 'WFS1', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7A', 'XIRP1', 'ZBTB16', 'ZEB1', 'ZEB2', 'ZSCAN1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.9408644504639472 Spearman Correlation: 0.9237686573195413 Coefficient of Determination: 0.8852259141468249 RMSE: 0.12852200879255657 NRMSE: 0.04656931980308594 MAPE: 2932.324276167465 Pearson Correlation: 0.061827886839771154 Spearman Correlation: 0.05557425903066123 Coefficient of Determination: -64.84877951610844 RMSE: 2.7043706797587306 NRMSE: 1.3950985719526279 MAPE: 1927.0099157749812 Predictor: ElasticNet Pearson Correlation: 0.6735655592686786 Spearman Correlation: 0.6508016593518567 Coefficient of Determination: 0.3978543841520591 RMSE: 0.2943786762559476 NRMSE: 0.1066666701412956 MAPE: 2215.6910155840337 Pearson Correlation: 0.04514233112123924 Spearman Correlation: 0.13316126136236114 Coefficient of Determination: -0.13718205327861832 RMSE: 0.35539175854186017 NRMSE: 0.18333527224519217 MAPE: 164.24934382745576 Predictor: RandomForests Pearson Correlation: 0.550213109049189 Spearman Correlation: 0.4891234906858902 Coefficient of Determination: 0.1892807304488393 RMSE: 0.34157873950022544 NRMSE: 0.12376938165817286 MAPE: 1003.40915529767 Pearson Correlation: 0.17163326065502296 Spearman Correlation: 0.1920048878414943 Coefficient of Determination: -0.004505765583519228 RMSE: 0.33401699974633664 NRMSE: 0.1723087159766088 MAPE: 181.21785458783677 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.5168390583924105 Spearman Correlation: 0.5403178575375212 Coefficient of Determination: 0.2671226122799537 RMSE: 0.1762760293337962 NRMSE: 0.12562968009877576 MAPE: 434.55039857005505 Pearson Correlation: 0.40637234139747164 Spearman Correlation: 0.40395266773899924 Coefficient of Determination: -0.32513630193522625 RMSE: 0.23920368452191235 NRMSE: 0.21290179657325267 MAPE: 926.9153647230173 Predictor: ElasticNet Pearson Correlation: 0.4502411301921341 Spearman Correlation: 0.4784511370923908 Coefficient of Determination: 0.1857680114143465 RMSE: 0.18580255360695666 NRMSE: 0.13241911256678354 MAPE: 354.601296657717 Pearson Correlation: 0.4883564579220066 Spearman Correlation: 0.4209204603548673 Coefficient of Determination: 0.1440457340763096 RMSE: 0.19224845996101944 NRMSE: 0.1711095821786669 MAPE: 304.9277412813807 Predictor: RandomForests Pearson Correlation: 0.5492470972367409 Spearman Correlation: 0.5433468367086957 Coefficient of Determination: 0.2574319733918553 RMSE: 0.17743762712931946 NRMSE: 0.12645753604723653 MAPE: 435.61382629898475 Pearson Correlation: 0.450451981096876 Spearman Correlation: 0.3980673075724137 Coefficient of Determination: 0.12512572123777044 RMSE: 0.194361576653241 NRMSE: 0.1729903489446223 MAPE: 635.6356775073434 Protein: PTEN Protein Interaction Partners Count: 884 x_train_column_count: 876 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ABTB1', 'ACTB', 'ACTG1', 'ADM', 'AEBP1', 'AFP', 'AKT1S1', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'AMHR2', 'ANXA2', 'ANXA5', 'APAF1', 'APC', 'ARAF', 'AREG', 'ARHGAP21', 'ARID1A', 'ARID2', 'ARL2BP', 'AR', 'ATF3', 'ATG12', 'ATG5', 'ATG7', 'ATM', 'ATRX', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'AXL', 'BAD', 'BAG5', 'BARD1', 'BAX', 'BBC3', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BIRC3', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BNIP3', 'BRAF', 'BRCA1', 'BRCA2', 'BRD4', 'BTG2', 'BTK', 'SPRTN', 'CLHC1', 'CA9', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBL', 'CBX7', 'CCL2', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD24', 'CD274', 'CD34', 'CD44', 'CD79A', 'CD79B', 'CDC14A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC7', 'CDH17', 'CDH1', 'CDH2', 'CDIPT', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CENPC', 'CFL1', 'CFLAR', 'CFTR', 'CHD1', 'CHD8', 'CHEK1', 'CHEK2', 'CHKA', 'CHORDC1', 'CHUK', 'CLTCL1', 'CLTC', 'CNOT6L', 'CREB1', 'CREBBP', 'CRP', 'CSF1R', 'CSF1', 'CSK', 'CSN2', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTGF', 'CTLA4', 'CTNNB1', 'CUL1', 'CUL3', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'DAPK1', 'DAXX', 'DBN1', 'DCAF13', 'DDIT4', 'DDR2', 'DECR1', 'DEPTOR', 'DGCR8', 'DICER1', 'DLC1', 'DLG1', 'DLG4', 'DNM1L', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOLPP1', 'DUSP1', 'DUSP6', 'DUT', 'DVL1', 'DYRK1A', 'E2F1', 'E2F2', 'E2F3', 'ECSCR', 'EGFR', 'EGF', 'EGR1', 'EIF2AK2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4EBP2', 'EIF4E', 'EIF4G1', 'EML4', 'ENDOG', 'EP300', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA3', 'EPHA4', 'EPHA5', 'EPHA7', 'EPHB1', 'EPHB2', 'EPHB3', 'EPHB4', 'ERBB2', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ESR1', 'ETS1', 'ETS2', 'ETV1', 'ETV6', 'EYA2', 'EZH2', 'EZR', 'FABP4', 'FASLG', 'FASN', 'FBXW7', 'FCGR1B', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FIG4', 'FKBP1A', 'FLCN', 'FLT1', 'FLT3', 'FLT4', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXG1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FOXP3', 'FRK', 'FYN', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GCK', 'GDF10', 'GDF2', 'GFAP', 'GJA1', 'GLI1', 'GNA11', 'GNAQ', 'GNAS', 'GNRHR', 'GRASP', 'GRB2', 'GRPR', 'GSK3A', 'GSK3B', 'GSTP1', 'H1F0', 'H2AFX', 'HAVCR2', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HES1', 'HGF', 'HIF1A', 'HIST1H2BA', 'HK1', 'HK2', 'HMGA2', 'HNF4A', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA1A', 'HSPA1B', 'HSPA2', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'ID1', 'ID4', 'IDH1', 'IDH2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL17A', 'IL21', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INPP4A', 'INPP4B', 'INPP5A', 'INPP5B', 'INPP5D', 'INPP5E', 'INPP5F', 'INPP5J', 'INPP5K', 'INPPL1', 'INSRR', 'INSR', 'INS', 'IPMK', 'IPO11', 'IQGAP1', 'IRAK1', 'IRS1', 'IRS2', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'ITPR3', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUN', 'KAT2B', 'KDM5B', 'KDM5C', 'KDM6A', 'KDR', 'KEAP1', 'ATG13', 'KIF11', 'KLLN', 'KITLG', 'KIT', 'KLF17', 'KLF2', 'KLF4', 'KLK3', 'KPNA1', 'KPNA2', 'KPNA5', 'KPNA6', 'KPNA7', 'KRAS', 'KRT14', 'KRT5', 'KRT8', 'LASP1', 'LATS1', 'LATS2', 'LCK', 'LDHA', 'LEF1', 'LEP', 'LGALS3', 'LIG4', 'LOX', 'LRIG1', 'LRP1B', 'LRRK2', 'LYN', 'LYPD1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAN2C1', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K3', 'MAP2K4', 'MAP2K7', 'MAP3K1', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK4', 'MAPK6', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAP1', 'MAPT', 'MARCH2', 'MARCH3', 'MAST1', 'MAST2', 'MAST3', 'MAST4', 'MATK', 'MCL1', 'MCM2', 'MCM7', 'MCRS1', 'MDK', 'MDM2', 'MDM4', 'MECOM', 'MECP2', 'MED12', 'MEN1', 'MET', 'MGMT', 'MINPP1', 'MITF', 'MKI67', 'MKRN1', 'MLH1', 'MLH3', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT1', 'MLST8', 'MME', 'MMP2', 'MMP9', 'MOV10', 'MRAP', 'MRE11A', 'MSH2', 'MSH6', 'MTDH', 'MTMR2', 'MTOR', 'MTSS1', 'MUTYH', 'MVP', 'MYCN', 'MYC', 'MYLK', 'MYOCD', 'NANOG', 'NCKAP1', 'NCOA3', 'NCOR2', 'NDFIP1', 'NDFIP2', 'NDRG1', 'NDRG2', 'NEDD4L', 'NEDD4', 'NES', 'NF1', 'NF2', 'NFATC1', 'NFATC4', 'NFE2L2', 'NFKBIA', 'NGFR', 'NKX3-1', 'NLGN3', 'NLGN4X', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR1H4', 'NR3C2', 'NRAS', 'NRP2', 'NTRK1', 'NTRK2', 'NUMB', 'OCRL', 'OLIG2', 'OTUD3', 'PALB2', 'PARD3', 'PARD6A', 'PARD6B', 'PARD6G', 'PARK2', 'PARK7', 'PARP1', 'PAX8', 'PBK', 'PBRM1', 'PCGF2', 'PCSK9', 'PDCD1', 'PDCD4', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PDK1', 'PDK2', 'PDPK1', 'PDZK1', 'PECAM1', 'PGM3', 'PGR', 'PHF6', 'PHLPP1', 'PHLPP2', 'PI3', 'PI4K2A', 'PI4K2B', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIK3R5', 'PIKFYVE', 'PINK1', 'PIP4K2A', 'PIP4K2B', 'PIP4K2C', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PIP5KL1', 'PKM', 'PLCB1', 'PLCB2', 'PLCB3', 'PLCB4', 'PLCD1', 'PLCD3', 'PLCD4', 'PLCE1', 'PLCG1', 'PLCG2', 'PLCH1', 'PLCH2', 'PLCZ1', 'PLEKHA1', 'PLEK', 'PLK1', 'PLK2', 'PLK3', 'BPIFA1', 'PMAIP1', 'PML', 'PMPCA', 'PMS1', 'PMS2', 'POLE', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPM1D', 'PPP2R1A', 'PPP2R4', 'PPP2R5A', 'PPP2R5E', 'PPP3CA', 'PPP6C', 'PRDX1', 'PREX2', 'PRKAA1', 'PRKAA2', 'PRKCI', 'PRKCZ', 'PRKDC', 'PRMT5', 'PROM1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTER', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPMT1', 'PTPN11', 'PTPN12', 'PTPN13', 'PTPN1', 'PTPRC', 'PTPRD', 'PTS', 'PXN', 'RAB7A', 'RAC1', 'RAC2', 'RAD51C', 'RAD51D', 'RAD51', 'RAD52', 'RAF1', 'RASA1', 'RASSF1', 'RB1CC1', 'RB1', 'RBL1', 'RBL2', 'RBM38', 'RBFOX2', 'RCN1', 'RECK', 'RELA', 'REL', 'REM1', 'RETN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'DROSHA', 'RNF146', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KB1', 'RPS6KB2', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'RRM1', 'RSL1D1', 'RUNX3', 'RWDD3', 'SACM1L', 'SALL4', 'SCAI', 'SCGB1D4', 'SCRIB', 'SDHB', 'SDHC', 'SERPINA1', 'SERPINA4', 'SERPINB5', 'SESN1', 'SESN2', 'SETD2', 'SGK1', 'SGK2', 'SGK3', 'SHANK2', 'SHARPIN', 'SHC1', 'SHFM1', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT5', 'SIRT6', 'SIRT7', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC2A4', 'SLC34A2', 'SLC9A3R1', 'SLC9A3R2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNCA', 'SNX27', 'SOCS1', 'SOCS3', 'SOD2', 'SOS1', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPOP', 'SPRY1', 'SPRY2', 'SRBD1', 'SRC', 'SREBF1', 'SRF', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STMN1', 'STUB1', 'STX16', 'SUCLG2', 'SUMO1', 'SYK', 'SYNJ1', 'SYNJ2', 'TACSTD2', 'TBX1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TEP1', 'TERT', 'TET1', 'TGFB1', 'TGFBR1', 'TGFBR2', 'TGM2', 'THBS1', 'TIMP1', 'TIMP3', 'TJP1', 'TLR4', 'TMEM55A', 'TMEM55B', 'TMPRSS2', 'TNFRSF10B', 'TNFSF10', 'TNF', 'TNKS2', 'TNKS', 'TNPO2', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TPM1', 'TRAF6', 'TRIM27', 'TRIM29', 'TSC1', 'TSC2', 'TTN', 'TUT1', 'TWIST1', 'TWSG1', 'TXN', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2E1', 'UBE2I', 'UBE2L3', 'UBE3A', 'ULK1', 'ULK2', 'USP10', 'USP13', 'USP18', 'USP28', 'USP7', 'USP8', 'UTF1', 'UVRAG', 'VCL', 'VDR', 'VEGFA', 'VHL', 'WDR18', 'WDTC1', 'WEE1', 'WIPI1', 'WIPI2', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT9A', 'WNT9B', 'WT1', 'WWP1', 'WWP2', 'XIAP', 'XPO1', 'XPO5', 'YAP1', 'YES1', 'YWHAB', 'YWHAZ', 'YY1', 'ZEB1', 'ZEB2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.584418458505877e-15 NRMSE: 4.99926195161304e-16 MAPE: 2.857037743898305e-12 Pearson Correlation: 0.03848991693534187 Spearman Correlation: -0.01892043541690046 Coefficient of Determination: -1.5683531064355782 RMSE: 1.1948588091764238 NRMSE: 0.18682805240816572 MAPE: 2280.6983454168767 Predictor: ElasticNet Pearson Correlation: 0.8099401524662414 Spearman Correlation: 0.7769945959658677 Coefficient of Determination: 0.6173704313459174 RMSE: 0.3475013820243925 NRMSE: 0.06722016829626906 MAPE: 350.1489805210508 Pearson Correlation: 0.28869817661676633 Spearman Correlation: 0.414980236661305 Coefficient of Determination: 0.04204918000130076 RMSE: 0.7297276974804469 NRMSE: 0.11410017941997448 MAPE: 172.01027436514659 Predictor: RandomForests Pearson Correlation: 0.608299597331999 Spearman Correlation: 0.56824097230616 Coefficient of Determination: 0.2836381712611429 RMSE: 0.4754813534787179 NRMSE: 0.0919764301839055 MAPE: 168.30918216911732 Pearson Correlation: 0.43538911669612135 Spearman Correlation: 0.4725719772066984 Coefficient of Determination: 0.14202527403410892 RMSE: 0.6905998365003235 NRMSE: 0.10798214940197381 MAPE: 148.10205154417665 Protein: BRCA2 Protein Interaction Partners Count: 361 x_train_column_count: 351 x_train columns: ['ABL1', 'ACHE', 'ADRB1', 'ADRB2', 'AKT1', 'ALK', 'APEX1', 'ARID1A', 'ARPC1A', 'AR', 'ATAD5', 'ATM', 'ATRIP', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'B3GALTL', 'BACH1', 'BARD1', 'BCCIP', 'BCHE', 'BDNF', 'BECN1', 'BIRC5', 'BLM', 'BMI1', 'BRCA1', 'BRCC3', 'BRE', 'BRIP1', 'SLX4', 'BUB1B', 'BUB1', 'BUB3', 'SFR1', 'RHNO1', 'RMI2', 'BABAM1', 'MMS22L', 'CASC1', 'CASC5', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCNE1', 'CDC25A', 'CDC25C', 'CDC45', 'CDC6', 'CDH1', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CENPE', 'CENPF', 'CEP55', 'CHEK1', 'CHEK2', 'CHRNA1', 'CLSPN', 'CNTROB', 'CREM', 'CSMD3', 'CTNNB1', 'CYP19A1', 'DMC1', 'DNA2', 'DSN1', 'DYNC1LI2', 'EGFR', 'EGF', 'ELAC2', 'EME1', 'EME2', 'ENAM', 'EPCAM', 'ERBB2', 'ERBB3', 'ERCC1', 'ERCC2', 'ERCC4', 'ERCC5', 'ERCC6', 'ERCC8', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM175A', 'FANCA', 'FANCB', 'FANCC', 'FANCD2', 'FANCE', 'FANCF', 'FANCG', 'FANCI', 'FANCL', 'FANCM', 'FBN1', 'FBXO18', 'FBXW7', 'FEN1', 'FGFR2', 'FHIT', 'FLNA', 'FOXM1', 'GAPDH', 'GEN1', 'SLX1B', 'H2AFX', 'HELQ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HMG20A', 'HMG20B', 'HMMR', 'HNRNPC', 'HOXB13', 'HRAS', 'HUS1', 'ITPKB', 'KAT2B', 'KAT5', 'KEAP1', 'SPIDR', 'KIF23', 'KIF4A', 'KIT', 'KLK3', 'KRAS', 'KRT5', 'LIG1', 'LIG3', 'LIG4', 'LIMD1', 'LSP1', 'MAD2L2', 'MAGED1', 'MAMSTR', 'MAP2K2', 'MAP3K1', 'MCM10', 'MCPH1', 'MDC1', 'MDM2', 'MDM4', 'MEN1', 'MGMT', 'MKI67', 'MLH1', 'MLH3', 'KMT2C', 'MND1', 'MORF4L1', 'MRE11A', 'MRPL36', 'MSH2', 'MSH3', 'MSH4', 'MSH5', 'MSH6', 'MTA2', 'FAN1', 'MUC1', 'MUS81', 'MUTYH', 'MYC', 'NBN', 'NCAPG', 'NEDD4', 'NF1', 'NHEJ1', 'NNT', 'NOTCH1', 'NSL1', 'NSMCE4A', 'OBFC1', 'OGG1', 'PALB2', 'PARG', 'PARP1', 'PARP2', 'PARP3', 'PAXIP1', 'PCNA', 'PDLIM7', 'PDS5A', 'PDS5B', 'PGR', 'PIK3CA', 'PLCB4', 'PLEC', 'PLEKHH1', 'PLK1', 'PMS1', 'PMS2', 'PNOC', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'POLN', 'POLQ', 'PRDM9', 'PRKDC', 'PRSS1', 'PSMC3IP', 'PSMD3', 'PSMD6', 'PTEN', 'RAD17', 'RAD18', 'RAD1', 'RAD21', 'RAD23B', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD52', 'RAD54B', 'RAD54L', 'RAD9A', 'RAD9B', 'RAG2', 'RASSF1', 'RBBP8', 'RBMX', 'RECQL4', 'RECQL5', 'RECQL', 'RET', 'REV1', 'REV3L', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RNF168', 'RNF8', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SKP2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCAL1', 'SMARCB1', 'SMC1A', 'SMC2', 'SMC3', 'SMC4', 'SMC5', 'SMC6', 'SMUG1', 'SNAI2', 'SP1', 'SPO11', 'STAT5A', 'STK11', 'STRA13', 'SUV39H1', 'SYCP3', 'TBCE', 'TDP1', 'TERT', 'TEX15', 'TMPRSS2', 'TNS1', 'TOP1', 'TOP2A', 'TOP3A', 'TOP3B', 'TOPBP1', 'TOX3', 'TP53BP1', 'TP53', 'TPX2', 'TRIP12', 'PRSS58', 'TTK', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2D1', 'UBE2E2', 'UBE2E3', 'UBE2N', 'UBE2T', 'UIMC1', 'USF1', 'USP11', 'USP15', 'USP1', 'USP21', 'USP4', 'UVRAG', 'VEGFA', 'VWF', 'WDR48', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WTIP', 'XPA', 'XPO1', 'XRCC1', 'XRCC2', 'XRCC3', 'XRCC4', 'XRCC5', 'XRCC6', 'ZFYVE26', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.8392616558044157 Spearman Correlation: 0.803151973960087 Coefficient of Determination: 0.7043601269035695 RMSE: 0.10428549787886417 NRMSE: 0.0671834420221383 MAPE: 206.30477906555714 Pearson Correlation: 0.103092186463637 Spearman Correlation: 0.03354405915285727 Coefficient of Determination: -2.498809284898428 RMSE: 0.3892670375776391 NRMSE: 0.3781825082605232 MAPE: 1722.8920106760836 Predictor: ElasticNet Pearson Correlation: 0.4649938693483507 Spearman Correlation: 0.4323474620094877 Coefficient of Determination: 0.17762695576300813 RMSE: 0.17393094179956112 NRMSE: 0.11205085636950306 MAPE: 172.36139416083697 Pearson Correlation: 0.39380278549286674 Spearman Correlation: 0.421364356164042 Coefficient of Determination: 0.12441058568815899 RMSE: 0.194732189097043 NRMSE: 0.18918711476332983 MAPE: 226.7912369761335 Predictor: RandomForests Pearson Correlation: 0.5689664804559879 Spearman Correlation: 0.4743332344252423 Coefficient of Determination: 0.18695680708568396 RMSE: 0.17294150113636997 NRMSE: 0.11141343284675148 MAPE: 143.06895102424457 Pearson Correlation: 0.202703572915966 Spearman Correlation: 0.2607339243631467 Coefficient of Determination: 0.03292509222128148 RMSE: 0.20465273469918463 NRMSE: 0.1988251689959144 MAPE: 206.63029933075143 Protein: CDKN2A Protein Interaction Partners Count: 612 x_train_column_count: 605 x_train columns: ['ABCC1', 'ABL1', 'ACAP1', 'ACAP2', 'ACP5', 'ACTA1', 'ACTB', 'ACTG1', 'ADAMTS9', 'ADAP1', 'AFP', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD12', 'ANXA5', 'AP3D1', 'AP3S1', 'AP3S2', 'APAF1', 'APBA1', 'APBA2', 'ARAP1', 'ARAP2', 'ARF1', 'ARF3', 'ARF4', 'ARF5', 'ARF6', 'ARFGAP1', 'ARFGAP3', 'ARFIP2', 'ARFRP1', 'ARID1A', 'ARID2', 'ARID5B', 'ARL10', 'ARL1', 'ARL2', 'ARL3', 'ARL4A', 'ARL5A', 'AR', 'ASAP1', 'ATM', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'AXIN1', 'BAP1', 'BCL2L11', 'BCL2L1', 'BCL6', 'BECN1', 'BIRC5', 'BMI1', 'BRAF', 'BRCA1', 'BRCA2', 'BUB1B', 'RGCC', 'C1QBP', 'RABL6', 'CACNA1G', 'CADM1', 'CAMK1D', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNL1', 'CD274', 'CD34', 'CD44', 'CDC123', 'CDC20', 'CDC25A', 'CDC25C', 'CDC42', 'CDC45', 'CDC5L', 'CDC6', 'CDC7', 'CDH13', 'CDH17', 'CDH1', 'CDH2', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5RAP3', 'CDK6', 'CDK7', 'CDKAL1', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDX2', 'CEACAM5', 'CEBPB', 'CEBPE', 'CHEK1', 'CHEK2', 'CHFR', 'CHKA', 'COMMD1', 'CRABP1', 'CREBBP', 'CSF1R', 'CSF1', 'CSF2', 'CTBP1', 'CTBP2', 'CTCF', 'CTLA4', 'CTNNB1', 'CTSK', 'CUL1', 'CUL3', 'CXCR4', 'CYCS', 'CYLD', 'CYTH1', 'CYTH2', 'CYTH3', 'DAB2IP', 'DAP', 'DAXX', 'DICER1', 'DIRAS3', 'DLEC1', 'DMTF1', 'DNAH3', 'DNMT1', 'DNMT3A', 'DNMT3B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EBF1', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EP300', 'EPCAM', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ETS1', 'ETV6', 'EWSR1', 'EZH1', 'EZH2', 'FAT1', 'FBXW7', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FKBP2', 'FLT3', 'FMN2', 'FN1', 'FOS', 'FOXA1', 'FOXM1', 'FOXN2', 'FOXO1', 'FOXO3', 'FTO', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GATA4', 'GATA5', 'GBF1', 'GDF15', 'GGA1', 'GGA2', 'GGA3', 'GIT1', 'GIT2', 'GLI1', 'GLTSCR2', 'GMNN', 'GNA11', 'GNAQ', 'GNAS', 'GNL3', 'GOLPH3', 'GP5', 'GSPT1', 'GSTP1', 'H2AFX', 'H2AFZ', 'H3F3A', 'H3F3B', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC9', 'HELLS', 'HGF', 'HHEX', 'HIC1', 'HIF1A', 'HIST1H2BA', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AA3', 'HIST2H2AC', 'HIST2H4A', 'HIST4H4', 'HLTF', 'HMGA2', 'HNF4A', 'HNRNPD', 'HOPX', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA4', 'HSPA9', 'HUWE1', 'ID1', 'IDH1', 'IDH2', 'IGF1R', 'IGF1', 'IGF2BP2', 'IGF2R', 'IGF2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING4', 'INS', 'IQSEC1', 'IRS1', 'ISOC2', 'ITGAM', 'JAK1', 'JAK2', 'JAK3', 'JAZF1', 'JUNB', 'JUN', 'KAT2B', 'KAT5', 'KCNJ11', 'KCNQ1', 'KDM1A', 'KDM2B', 'KDM6A', 'KDM6B', 'KDR', 'KEAP1', 'KIAA1549', 'KIT', 'KLF4', 'KRAS', 'KRT19', 'KRT20', 'KRT5', 'KRT7', 'LATS2', 'LOX', 'LRRK2', 'MACROD2', 'MAF', 'MAP2K1', 'MAP2K4', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MAX', 'MC1R', 'MCL1', 'MCM10', 'MCM2', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEN1', 'MEOX1', 'MEOX2', 'MET', 'MGMT', 'MITF', 'MKRN1', 'MLANA', 'MLH1', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT3', 'MME', 'MMP2', 'MMP7', 'MMP9', 'MOV10', 'MRAS', 'MSH2', 'MSH6', 'MTA1', 'MTAP', 'MTHFR', 'MTNR1B', 'MTOR', 'MUC1', 'MYBL2', 'MYCL', 'MYCN', 'MYC', 'MYOD1', 'KAT6A', 'NANOG', 'NCAM1', 'NCL', 'NCOR1', 'NES', 'NEUROG1', 'NF1', 'NF2', 'NFATC1', 'NFE2L2', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NPM1', 'NRAS', 'NSUN2', 'ORC4', 'ORC5', 'OSBP2', 'P2RY8', 'PA2G4', 'PALB2', 'PARP1', 'PAX3', 'PAX5', 'PAX8', 'PBRM1', 'PCGF2', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PEX19', 'PGR', 'PHLDB1', 'PI3', 'PIAS2', 'PIGF', 'PIK3CA', 'PIK3R1', 'PIP4K2A', 'PLEKHA3', 'PLEKHA8', 'PLEK', 'PLK1', 'PMAIP1', 'PML', 'PMS2', 'POTEF', 'POU5F1', 'PPARA', 'PPARG', 'PPM1D', 'PPP1R9B', 'PPP3CA', 'PRDM2', 'PRMT6', 'PROM1', 'PRSS1', 'PSMC3', 'PSMD10', 'PSME3', 'PTCH1', 'PTEN', 'PTER', 'PTF1A', 'PTGS2', 'PTPN11', 'PTPRC', 'PTPRD', 'PXN', 'RAB11A', 'RAB5A', 'RABEP1', 'RABGEF1', 'RAC2', 'RAD51', 'RAF1', 'RAP2B', 'RARB', 'RASSF1', 'RASSF2', 'RB1', 'RBL1', 'RBL2', 'RCC1', 'RELA', 'RELB', 'REL', 'RET', 'RHOA', 'DROSHA', 'RNF2', 'RNF43', 'ROS1', 'RPL11', 'RPRM', 'RPS27A', 'RPS6KB1', 'RRAS2', 'RRAS', 'RTEL1', 'RUNX2', 'RUNX3', 'SDHC', 'SENP1', 'SENP3', 'SERPINE1', 'SERTAD1', 'SETD2', 'SFN', 'SFRP1', 'SFRP2', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SIX2', 'SKP2', 'SLC30A8', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SNAI1', 'SNAI2', 'SNCA', 'SOCS1', 'SOX2', 'SP1', 'SPEN', 'SRC', 'STAT1', 'STAT3', 'STK11', 'STK25', 'STK33', 'STMN1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUV39H1', 'SUZ12', 'SYNE1', 'SYP', 'TBL1XR1', 'TBRG1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TERT', 'TET2', 'TFDP1', 'TFPI2', 'TGFBR2', 'THADA', 'THBS1', 'TIMP3', 'TMCO1', 'TMEM115', 'TNFRSF10B', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TRADD', 'TRIM28', 'TRIP12', 'PRSS58', 'TSC2', 'TSPAN8', 'TTF1', 'TWIST1', 'TWSG1', 'TYR', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2I', 'UBE3A', 'UCHL1', 'USP7', 'UTF1', 'VEGFA', 'VHL', 'WDTC1', 'WEE1', 'WFS1', 'WHSC1', 'WIF1', 'WRN', 'WT1', 'WWOX', 'XRCC1', 'YY1', 'ZBTB17', 'ZBTB7A', 'ZEB1', 'ZFP91', 'ZNF148', 'ZNF217', 'ZNF227', 'ZNF410', 'ZNF420', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 4.591214112245347e-15 NRMSE: 1.0379143466136197e-15 MAPE: 4.190926816089006e-12 Pearson Correlation: 0.13079372530802538 Spearman Correlation: 0.1374505916532625 Coefficient of Determination: -8.683389504891839 RMSE: 1.9625447884086378 NRMSE: 0.5913060525485501 MAPE: 599.3471405579271 Predictor: ElasticNet Pearson Correlation: 0.8390393777384134 Spearman Correlation: 0.8121996863723595 Coefficient of Determination: 0.6818961518263118 RMSE: 0.3801153194502273 NRMSE: 0.08593089622476031 MAPE: 147.18443579593094 Pearson Correlation: 0.5798226780659412 Spearman Correlation: 0.45204803052407144 Coefficient of Determination: 0.3328748003951688 RMSE: 0.5151213485811871 NRMSE: 0.15520378083193345 MAPE: 235.3969270735874 Predictor: RandomForests Pearson Correlation: 0.6873680498249779 Spearman Correlation: 0.6297196272054022 Coefficient of Determination: 0.4621442326374321 RMSE: 0.4942695162171567 NRMSE: 0.11173720271666251 MAPE: 178.0013051338801 Pearson Correlation: 0.6006430571555817 Spearman Correlation: 0.5016203464141189 Coefficient of Determination: 0.34018642908131047 RMSE: 0.5122907309142629 NRMSE: 0.15435092826582192 MAPE: 134.0557593536924 Protein: TP53 Protein Interaction Partners Count: 1000 x_train_column_count: 991 x_train columns: ['ABCB1', 'ABCC1', 'ABL1', 'ACTB', 'ACTL6A', 'ADAM17', 'AFP', 'AGT', 'AICDA', 'AIFM2', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD2', 'ANXA1', 'ANXA2', 'ANXA5', 'APAF1', 'APBB1', 'APC', 'APEX1', 'APOBEC3B', 'APP', 'ARID1A', 'ARID3A', 'AR', 'ASF1A', 'ASXL1', 'ATF2', 'ATF3', 'ATG7', 'ATM', 'ATN1', 'ATRIP', 'ATRX', 'ATR', 'ATXN3', 'AURKA', 'AURKB', 'AXIN1', 'AXL', 'BACE1', 'BAG1', 'BAG2', 'BAIAP2L1', 'BAK1', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2A1', 'BCL2L11', 'BCL2L12', 'BCL2L14', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BID', 'BIRC3', 'BIRC5', 'BIRC6', 'BLM', 'BMF', 'BMI1', 'BMX', 'BNIP3L', 'BNIP3', 'BRCA1', 'BRCA2', 'BRCC3', 'BRD1', 'BRD4', 'BRD7', 'BRE', 'BRIP1', 'BRPF1', 'BRPF3', 'BTG2', 'BTK', 'BUB1B', 'BUB1', 'RHNO1', 'RGCC', 'RMI2', 'CNOT11', 'SETD9', 'CA9', 'CABIN1', 'CABLES1', 'CAPN1', 'CARM1', 'CASP10', 'CASP1', 'CASP2', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBX2', 'CBX4', 'CBX6', 'CBX8', 'CCDC106', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNG2', 'CCNH', 'CCNK', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CD24', 'CD274', 'CD34', 'CD40LG', 'CD40', 'CD44', 'CD82', 'CDC20', 'CDC25A', 'CDC25C', 'CDH17', 'CDH1', 'CDK12', 'CDK13', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CEACAM5', 'CEBPB', 'CENPJ', 'CFL1', 'CFLAR', 'CHD3', 'CHD4', 'CHD8', 'CHEK1', 'CHEK2', 'CHUK', 'CISH', 'CITED2', 'CLSPN', 'CLU', 'CNOT10', 'CNOT1', 'CNOT2', 'CNOT3', 'CNOT4', 'CNOT6L', 'CNOT6', 'CNOT7', 'CNOT8', 'COPS5', 'CREB1', 'CREBBP', 'CRYAB', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK1G1', 'CSNK1G2', 'CSNK1G3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTCF', 'CTGF', 'CTNNB1', 'CUL4A', 'CUL7', 'CUL9', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP1A1', 'DACH1', 'DAPK1', 'DAP', 'DAXX', 'DDB1', 'DDB2', 'DDIT4', 'DDX17', 'DDX3X', 'DDX5', 'DECR1', 'DGCR8', 'DHCR24', 'DHFR', 'DIABLO', 'DICER1', 'DKK1', 'DMTF1', 'DNA2', 'DNAJA3', 'DNAJB1', 'DNMT1', 'DNMT3A', 'DNTT', 'DPYD', 'DRAM1', 'DTL', 'DUSP1', 'DUSP2', 'DYRK1A', 'DYRK2', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EEF1A1', 'EEF1A2', 'EGFR', 'EGF', 'EGR1', 'EHMT1', 'EHMT2', 'EI24', 'EIF2AK2', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4EBP1', 'ELANE', 'ELAVL1', 'ELL3', 'ELL', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHA3', 'EPHB2', 'ERBB2', 'ERBB4', 'ERCC1', 'ERCC2', 'ERCC3', 'ERCC6', 'ESR1', 'ETS1', 'ETS2', 'EWSR1', 'EXO1', 'EZH2', 'F2', 'FADD', 'AMER1', 'FAM175B', 'FANCC', 'FANCD2', 'FASLG', 'FAS', 'FBL', 'FBXO11', 'FBXO4', 'FBXW7', 'FGF1', 'FGF2', 'FGFR3', 'FHIT', 'FHL2', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FSCN1', 'FUT4', 'FZR1', 'G3BP1', 'G6PD', 'GADD45A', 'GADD45B', 'GADD45G', 'GAPDH', 'GATAD2A', 'GATAD2B', 'GDF15', 'GFI1', 'GLS2', 'GLTSCR2', 'GNL3', 'GRAMD4', 'GRB10', 'GRB14', 'GSK3B', 'GSTP1', 'GTF2H1', 'GTSE1', 'H1F0', 'H2AFX', 'HAMP', 'HCK', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC5', 'HDAC7', 'HDAC8', 'HDAC9', 'HERC5', 'HIC1', 'HIF1A', 'HIPK1', 'HIPK2', 'HIPK3', 'HIPK4', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HK2', 'HMGA1', 'HMGA2', 'HMGB1', 'HMGB2', 'HMMR', 'HMOX1', 'HNF4A', 'HNRNPK', 'HNRNPL', 'HOXA5', 'HPGDS', 'HRAS', 'HSF1', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA1A', 'HSPA1B', 'HSPA1L', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'HSPB1', 'HSPB2', 'HTT', 'HUS1', 'HUWE1', 'ICAM1', 'ID2', 'ID4', 'IDH1', 'IDH2', 'IFI16', 'IFNAR1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IGFBP7', 'IKBKB', 'IL17A', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING2', 'ING3', 'ING4', 'ING5', 'INSIG1', 'INS', 'IRF1', 'ISG15', 'ITPKB', 'JAG1', 'JAK2', 'JMY', 'JUN', 'KAT2A', 'KAT2B', 'KAT5', 'KDM1A', 'KDM6A', 'KDM6B', 'KDR', 'KHDRBS1', 'CCAR2', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KPNA2', 'KRAS', 'KRT14', 'KRT17', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'L3MBTL1', 'LAMA4', 'LEP', 'LGALS7B', 'LGALS7', 'LIF', 'LIG4', 'LIN28A', 'PIDD1', 'LRRK2', 'LYN', 'MAF1', 'MAF', 'MAGEA2', 'MAP1LC3B', 'MAP2K1', 'MAP2K3', 'MAP2K7', 'MAP3K1', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MBD3', 'MCL1', 'MCM7', 'MDC1', 'MDH1', 'MDM2', 'MDM4', 'MEAF6', 'MECOM', 'MELK', 'MET', 'MGMT', 'MIF', 'MKI67', 'MKRN1', 'MLH1', 'KMT2D', 'KMT2C', 'MMP13', 'MMP1', 'MMP2', 'MMP9', 'MOV10', 'MRE11A', 'MSH2', 'MSH6', 'MSX1', 'MT1A', 'MT2A', 'MTA1', 'MTA2', 'MTA3', 'MTOR', 'MUC1', 'MUTYH', 'MYBBP1A', 'MYB', 'MYCN', 'MYC', 'MYOCD', 'KAT8', 'KAT6A', 'NANOG', 'NBN', 'NCL', 'NCOA3', 'NCOR1', 'NCOR2', 'NDN', 'NDRG1', 'NEDD8', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFE2L2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NFKBIB', 'NFYA', 'NFYB', 'NFYC', 'NGFR', 'NKX2-1', 'NLK', 'NLRC4', 'NME1', 'NOC2L', 'NOS3', 'NOTCH1', 'NOTCH3', 'NOTCH4', 'NOX4', 'NPM1', 'NQO1', 'NR1I2', 'NR2E1', 'NR3C1', 'NR4A1', 'NR4A2', 'NRAS', 'NUAK1', 'NUMB', 'NUPR1', 'OGG1', 'OLIG2', 'OPN1SW', 'OSGIN1', 'OTUB1', 'OTUB2', 'OTUD5', 'PADI4', 'PALB2', 'PARK2', 'PARK7', 'PARP1', 'PATZ1', 'PAX2', 'PAX3', 'PAX8', 'PBK', 'PBRM1', 'PCBP4', 'PCNA', 'PDCD4', 'PDCD5', 'PDGFRA', 'PDGFRB', 'PDLIM7', 'PER2', 'PERP', 'PGR', 'PHB', 'PHC1', 'PHC2', 'PHC3', 'PHF20', 'PHGDH', 'PI3', 'PIAS1', 'PIAS2', 'PIAS4', 'PIK3CA', 'PIN1', 'PKM', 'PLAGL1', 'PLAU', 'PLK1', 'PLK2', 'PLK3', 'PLK4', 'PMAIP1', 'PML', 'PMS2', 'POLI', 'POLK', 'POU4F1', 'POU4F2', 'POU5F1', 'PPARGC1A', 'PPARG', 'PPIF', 'PPM1D', 'PPP1R13B', 'PPP1R13L', 'PPP1R15A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R4', 'PPP2R5C', 'PRDM1', 'PRDM2', 'PRDX1', 'PRELID1', 'PRIMA1', 'PRKAA1', 'PRKAA2', 'PRKAB1', 'PRKAB2', 'PRKAG1', 'PRKAG2', 'PRKAG3', 'PRKCA', 'PRKCD', 'PRKCZ', 'PRKD1', 'PRKDC', 'PRKG1', 'PRMT1', 'PRMT5', 'PROM1', 'PSEN1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTBP1', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2', 'PTTG1', 'RABGGTA', 'RABGGTB', 'RAD17', 'RAD1', 'RAD50', 'RAD51', 'RAD9A', 'RAD9B', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP4', 'RBBP6', 'RBBP7', 'RBBP8', 'RBL1', 'RBL2', 'RBM38', 'RBPJ', 'RCHY1', 'RCOR1', 'RECQL4', 'RELA', 'REM1', 'REST', 'RET', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RFFL', 'RFWD2', 'RING1', 'RMI1', 'DROSHA', 'RNF20', 'RNF2', 'RNF34', 'RNF43', 'ROCK1', 'RPA1', 'RPA2', 'RPA3', 'RPL11', 'RPL22', 'RPL26', 'RPL5', 'RPRM', 'RPS14', 'RPS19', 'RPS27A', 'RPS27L', 'RPS3', 'RPS6KB1', 'RQCD1', 'RRAD', 'RRM2B', 'RRM2', 'RUNX2', 'RUNX3', 'S100A2', 'S100A4', 'S100A6', 'S100B', 'SALL4', 'SCO2', 'SDHC', 'SENP1', 'SENP3', 'SERPINB5', 'SERPINE1', 'SESN1', 'SESN2', 'SESN3', 'SETD2', 'SETD7', 'SETD8', 'SETDB1', 'SFN', 'SRSF1', 'SGK1', 'SHFM1', 'SHH', 'SHISA5', 'SIK1', 'SIN3A', 'SIN3B', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SKP2', 'SLC2A14', 'SLC2A1', 'SLC2A2', 'SLC2A3', 'SLC6A6', 'SLMO1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMG1', 'SMG7', 'SMYD2', 'SNAI1', 'SNAI2', 'SOCS1', 'SOCS3', 'SOD2', 'SORT1', 'SOX2', 'SOX4', 'SP100', 'SP1', 'SP3', 'SP7', 'SPATA18', 'SPP1', 'SQSTM1', 'SRC', 'SREBF1', 'SREBF2', 'SSRP1', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STEAP3', 'STK11', 'STMN1', 'STUB1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUMO4', 'SUPT16H', 'SUV39H1', 'SUZ12', 'SYK', 'SYP', 'TADA3', 'TAF10', 'TAF11', 'TAF12', 'TAF13', 'TAF15', 'TAF1L', 'TAF1', 'TAF2', 'TAF3', 'TAF4B', 'TAF4', 'TAF5', 'TAF6', 'TAF7L', 'TAF7', 'TAF9B', 'TBPL1', 'TBPL2', 'TBP', 'TCHP', 'TCP1', 'TDG', 'TERT', 'TET2', 'TFAM', 'TFAP2A', 'TFAP2C', 'TFDP1', 'TFF1', 'TGFB1', 'TGM2', 'THBS1', 'TIMP3', 'TLR3', 'TLR9', 'TMEM219', 'TNFAIP3', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF10C', 'TNFRSF10D', 'TNF', 'TNK2', 'TNKS1BP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOE1', 'TOP1', 'TOP2A', 'TOP3A', 'TOPBP1', 'TOPORS', 'TP53AIP1', 'TP53BP1', 'TP53BP2', 'TP53I3', 'TP53INP1', 'TP53RK', 'TP63', 'TP73', 'TPT1', 'TPX2', 'TRAF6', 'TRIAP1', 'TRIM24', 'TRIM28', 'TRIM29', 'TRIM32', 'TRIM59', 'TRIM8', 'TRRAP', 'TSC2', 'TTC5', 'TTK', 'TWIST1', 'TWIST2', 'TXN', 'TYMS', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2D1', 'UBE2E1', 'UBE2I', 'UBE2K', 'UBE2N', 'UBE2Q1', 'UBE2S', 'UBE3A', 'UBN1', 'UCHL1', 'UHRF1', 'USF1', 'USP10', 'USP15', 'USP24', 'USP3', 'USP42', 'USP7', 'UTP14A', 'VEGFA', 'VHL', 'VPRBP', 'VRK1', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WWOX', 'XAF1', 'XIAP', 'XPA', 'XPO1', 'XRCC1', 'XRCC5', 'XRCC6', 'YBX1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'YY1', 'YY2', 'ZBTB33', 'ZBTB7A', 'ZEB1', 'ZEB2', 'ZKSCAN4', 'ZNF148', 'ZNF274', 'ZNF385A', 'ZNF420', 'ZNF668', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 2.1508418442224842e-15 NRMSE: 5.169050334589003e-16 MAPE: 9.457136606917288e-12 Pearson Correlation: 0.38410669445818924 Spearman Correlation: 0.3568897367797603 Coefficient of Determination: -1.043875920666903 RMSE: 0.6173370253761402 NRMSE: 0.1959053774359419 MAPE: 640.2030600036445 Predictor: ElasticNet Pearson Correlation: 0.8033717929488494 Spearman Correlation: 0.7333784180050325 Coefficient of Determination: 0.6132837191751443 RMSE: 0.27991342601660224 NRMSE: 0.06727071041014233 MAPE: 531.6242957011169 Pearson Correlation: 0.5983969951592447 Spearman Correlation: 0.5175351313607401 Coefficient of Determination: 0.3527824999054473 RMSE: 0.34739229934972016 NRMSE: 0.11024127295941867 MAPE: 274.84374508245276 Predictor: RandomForests Pearson Correlation: 0.662956796174116 Spearman Correlation: 0.5906003485941796 Coefficient of Determination: 0.36976787832351343 RMSE: 0.35733682059310323 NRMSE: 0.08587763051985178 MAPE: 704.1431686987754 Pearson Correlation: 0.5662325870207273 Spearman Correlation: 0.4523373109390392 Coefficient of Determination: 0.2646481304992504 RMSE: 0.3702905781747266 NRMSE: 0.11750779962386601 MAPE: 215.6468964503368 Protein: CTNNB1 Protein Interaction Partners Count: 992 x_train_column_count: 984 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACAN', 'ACP1', 'ACTA1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTN4', 'ACVR1B', 'ACVR1', 'ADAM10', 'ADCY7', 'ADIPOQ', 'AES', 'AFP', 'AHI1', 'AHR', 'AHSA1', 'AJAP1', 'AK9', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'ALPL', 'AMHR2', 'AMH', 'ANXA5', 'AP1M1', 'APC2', 'APCS', 'APC', 'APH1A', 'APH1B', 'AQP1', 'ARHGAP10', 'ARHGAP21', 'ARHGAP32', 'ARHGEF4', 'ARID1A', 'ARID2', 'ARMC7', 'ARMC8', 'ARVCF', 'ARX', 'AR', 'ASCL1', 'ASF1A', 'ASH2L', 'ASIP', 'ATF4', 'ATM', 'AURKA', 'AXIN1', 'AXIN2', 'BAG3', 'BCAR1', 'BCL2L1', 'BCL3', 'BCL6', 'BCL9L', 'BCL9', 'BDNF', 'BGLAP', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BMPR1B', 'BNIP2', 'BRAF', 'BRCA1', 'BRCA2', 'BRMS1L', 'BTRC', 'HILPDA', 'AK8', 'CA2', 'CA9', 'CABLES1', 'CACYBP', 'CALM1', 'CALM3', 'CARM1', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBLL1', 'CBL', 'CBY1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CD24', 'CD34', 'CD40', 'CD44', 'CDC27', 'CDC42', 'CDC73', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH16', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH26', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDHR5', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK8', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDON', 'CDX1', 'CDX2', 'CEBPA', 'CHD8', 'CHRD', 'CHUK', 'CITED1', 'CKAP5', 'CLCA1', 'CLDN3', 'CLDN5', 'COL1A1', 'COPS3', 'COPS5', 'COPS6', 'CREB1', 'CREBBP', 'CRKL', 'CRK', 'CRP', 'CRYAB', 'CSNK1A1L', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK2A3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNAL1', 'CTNNBIP1', 'CTNND1', 'CTNND2', 'CTTN', 'CUL1', 'CUL4A', 'CUL4B', 'CXCR4', 'CXXC4', 'DAB2', 'DACT1', 'DACT2', 'DACT3', 'DCT', 'DCX', 'DDB1', 'DDX39A', 'DDX3X', 'DDX5', 'DHODH', 'DHX9', 'DKK1', 'DKK2', 'DKK3', 'DKK4', 'DLG1', 'DLG2', 'DLG4', 'DLG5', 'DLGAP1', 'DLL4', 'DLX1', 'DNM2', 'DNMT1', 'DPYD', 'DSC1', 'DSC2', 'DSC3', 'DSG1', 'DSG2', 'DSG3', 'DSG4', 'DSP', 'DUSP6', 'DVL1', 'DVL2', 'DVL3', 'E2F3', 'ECM1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'ELAVL1', 'EMD', 'ENAH', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHB2', 'EPHB3', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EXOC3', 'EXOC4', 'EYA4', 'EZH2', 'EZR', 'F2RL2', 'FAF1', 'AMER1', 'FANCA', 'FASLG', 'FAS', 'FAT1', 'FAT4', 'FBXW11', 'FBXW7', 'FERMT2', 'FER', 'FGF10', 'FGF13', 'FGF2', 'FGF3', 'FGF4', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FLT3', 'FMN1', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC2', 'FOXG1', 'FOXL1', 'FOXL2', 'FOXM1', 'FOXN3', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FRAT1', 'FRAT2', 'FRZB', 'FSCN1', 'FSTL1', 'FSTL3', 'FURIN', 'FUS', 'FXR1', 'FYN', 'FZD10', 'FZD1', 'FZD2', 'FZD3', 'FZD4', 'FZD5', 'FZD6', 'FZD7', 'FZD8', 'FZD9', 'GAPDH', 'GATA2', 'GATA4', 'GCG', 'GDF2', 'GDNF', 'GFRA1', 'GJA1', 'GLI1', 'GLI2', 'GLI3', 'GLIS2', 'GLUL', 'GNA11', 'GNA12', 'GNA13', 'GNAQ', 'GNAS', 'GPC3', 'GRIA2', 'GRIP1', 'GSK3A', 'GSK3B', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HAS2', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC7', 'HERC5', 'HES7', 'HGF', 'HGS', 'HHEX', 'HIC1', 'HIF1A', 'HINT1', 'HIPK2', 'HIST1H1C', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HMGB1', 'HNF1A', 'HNF4A', 'HNRNPA1', 'HNRNPA2B1', 'HNRNPK', 'HNRNPM', 'HOXA10', 'HOXB4', 'HPGD', 'HRAS', 'HSP90AB1', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPD1', 'HTRA1', 'HTT', 'HUWE1', 'IBSP', 'IDH1', 'IDH2', 'IFNB1', 'IFRD1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP4', 'IHH', 'IKBKB', 'IL6', 'CXCL8', 'ILK', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IRF3', 'ISG15', 'ISL1', 'ITGAE', 'ITGB1', 'ITGB7', 'ITK', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'AJUBA', 'JUN', 'JUP', 'KANK1', 'KAT2A', 'KAT2B', 'KAT5', 'KCNN1', 'KCTD1', 'KDM1A', 'KDR', 'KIF18B', 'KIF3A', 'KIF5B', 'KIFC3', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KRAS', 'KREMEN1', 'KRIT1', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LATS2', 'LDB1', 'LDHB', 'LDLR', 'LEF1', 'LEO1', 'LGR4', 'LGR5', 'LGR6', 'LHCGR', 'LHX8', 'LIF', 'LIMA1', 'LMNA', 'LMNB1', 'LOX', 'LRP4', 'LRP5L', 'LRP5', 'LRP6', 'LRRFIP1', 'LRRK2', 'LZTFL1', 'MACF1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8IP1', 'MAPK8', 'MAPK9', 'MDFIC', 'MDFI', 'MDK', 'MDM2', 'MED12', 'MED1', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'KMT2D', 'MLLT10', 'MLLT11', 'MLLT4', 'MLLT6', 'KMT2A', 'MME', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP25', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MRAP', 'MSH2', 'MSH6', 'MSN', 'MSX1', 'MSX2', 'MTDH', 'MTOR', 'MUC13', 'MUC1', 'MUTYH', 'MYCN', 'MYC', 'MYF5', 'MYO1D', 'MYO6', 'MYO7A', 'MYOD1', 'MYOG', 'NANOG', 'NCAM1', 'NCCRP1', 'NCOA2', 'NCSTN', 'NDP', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEURL2', 'NF1', 'NF2', 'NFAT5', 'NFKB1', 'NIT1', 'NKD1', 'NKX2-5', 'NLK', 'NME1', 'NOG', 'NONO', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR0B1', 'NR4A1', 'NR4A2', 'NR5A1', 'NR5A2', 'NRAS', 'NRIP1', 'NTRK1', 'NTRK2', 'NTRK3', 'NUDT5', 'NUMB', 'NUP153', 'NUTF2', 'OTX2', 'PAK1', 'PAK2', 'PAK3', 'PANK4', 'PARD3', 'PARD6A', 'PARK2', 'PARP1', 'PAX3', 'PAX6', 'PAX7', 'PAX8', 'PDGFRA', 'PDGFRB', 'PECAM1', 'PGK1', 'PGR', 'PHB', 'JADE1', 'PI3', 'PICK1', 'PIK3CA', 'PIK3R1', 'PIK3R2', 'PIN1', 'PIP5K1A', 'PIP5K1C', 'PITX2', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAG1', 'PLEKHA7', 'PLK1', 'PML', 'PMS2', 'POLE', 'PORCN', 'POTEF', 'POU5F1', 'PPARD', 'PPARG', 'PPM1A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R2B', 'PPP2R5A', 'PPP2R5B', 'PPP2R5C', 'PPP2R5D', 'PPP2R5E', 'PRKACA', 'PRKACB', 'PRKACG', 'PRKAR1A', 'PRKCA', 'PRKCG', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRL', 'PRMT1', 'PROC', 'PROM1', 'PROP1', 'PSEN1', 'PSEN2', 'PSENEN', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTEN', 'PTGES3', 'PTGS2', 'PTH1R', 'PTH', 'PTK2', 'PTK7', 'PTMA', 'PTN', 'PTPN11', 'PTPN13', 'PTPN1', 'PTPN6', 'PTPRB', 'PTPRC', 'PTPRF', 'PTPRG', 'PTPRJ', 'PTPRK', 'PTPRM', 'PTPRU', 'PTPRZ1', 'PVRL1', 'PVRL2', 'PXN', 'PYGO1', 'PYGO2', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RALGDS', 'RANBP3', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RAPGEF2', 'RAPGEF6', 'RAPSN', 'RARA', 'RARB', 'RARG', 'RARS', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP5', 'RBMX', 'RBPJ', 'RBX1', 'RELA', 'REM1', 'RET', 'RHOA', 'RIPK2', 'RNF220', 'RNF43', 'ROBO1', 'ROCK1', 'ROCK2', 'ROR2', 'RPRD1A', 'RPS27A', 'RPSA', 'RSPO1', 'RSPO2', 'RSPO3', 'RSPO4', 'RUNX2', 'RUNX3', 'RUVBL1', 'RUVBL2', 'RXRA', 'RYK', 'S100A4', 'S100A6', 'SALL1', 'SALL4', 'SATB1', 'SCRIB', 'SDHC', 'SERPINE1', 'SETD2', 'SETD7', 'SFN', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHFM1', 'SHH', 'SIAH1', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT6', 'SKP1', 'SLC6A3', 'SLC9A3R1', 'SLCO1B3', 'SLCO2A1', 'SLIT1', 'SLK', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD5', 'SMAD7', 'SMAD9', 'SMARCA2', 'SMARCA4', 'SMARCA5', 'SMARCB1', 'SMO', 'SMURF1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNX1', 'SOST', 'SOX10', 'SOX13', 'SOX17', 'SOX1', 'SOX2', 'SOX3', 'SOX4', 'SOX6', 'SOX7', 'SOX8', 'SOX9', 'SP1', 'SP7', 'SPAG9', 'SPATA13', 'SPEN', 'SPN', 'SPP1', 'SRC', 'STAT3', 'STK11', 'STRAP', 'STX4', 'SUFU', 'SUV39H1', 'SYP', 'TADA3', 'TAX1BP3', 'TAZ', 'TBL1XR1', 'TBL1X', 'TBX5', 'TBX6', 'TCF12', 'TCF3', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TFAP2A', 'TFCP2', 'TFF1', 'TFF2', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBR1', 'TGFBR2', 'TGM2', 'TJP1', 'TJP2', 'TLE1', 'TLE2', 'TLE3', 'TLE4', 'TNFRSF11B', 'TNFSF11', 'TNF', 'TNIK', 'TNKS2', 'TNKS', 'TNS1', 'TOB1', 'TOP2A', 'TP53', 'TRAF4', 'TRIM33', 'TRIM37', 'TRIP10', 'TRRAP', 'TSC2', 'TUBA1A', 'TWIST1', 'TYMS', 'T', 'UBA52', 'UBB', 'UBC', 'UBE2B', 'UBE2R2', 'UBE3A', 'UBR5', 'UCHL1', 'UMPS', 'UPRT', 'USP4', 'USP7', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VAV2', 'VAV3', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VHL', 'VIM', 'WDR64', 'WDTC1', 'WHSC1', 'WIF1', 'WISP1', 'WLS', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'WWTR1', 'XPO1', 'YAP1', 'YARS', 'YEATS4', 'YES1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'ZAP70', 'ZAR1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZIC3', 'ZNRF3', 'ZYX', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 2.7539636310149725e-15 NRMSE: 6.651443413716001e-16 MAPE: 1.9275468534347504e-12 Pearson Correlation: 0.1604943617661519 Spearman Correlation: 0.20213967755208917 Coefficient of Determination: -1.2056791604011647 RMSE: 1.1917672851761858 NRMSE: 0.2505607781465364 MAPE: 1062.1293373701872 Predictor: ElasticNet Pearson Correlation: 0.8736077100160897 Spearman Correlation: 0.856983505525051 Coefficient of Determination: 0.7337636270159422 RMSE: 0.36708271451759816 NRMSE: 0.08865875628383688 MAPE: 410.05628711851017 Pearson Correlation: 0.44311416894055233 Spearman Correlation: 0.44041696280502257 Coefficient of Determination: 0.14886393727635427 RMSE: 0.7403205172899573 NRMSE: 0.15564723683667422 MAPE: 646.157339385253 Predictor: RandomForests Pearson Correlation: 0.6461410084604152 Spearman Correlation: 0.6459070131018553 Coefficient of Determination: 0.40205662224684124 RMSE: 0.5501235928851312 NRMSE: 0.13286725748360817 MAPE: 467.12340250751686 Pearson Correlation: 0.6714416404568353 Spearman Correlation: 0.47027768426040223 Coefficient of Determination: 0.29630819114905715 RMSE: 0.6731495154156094 NRMSE: 0.14152500113859418 MAPE: 610.5293619376868 Protein: CCNE1 Protein Interaction Partners Count: 350 x_train_column_count: 347 x_train columns: ['ABL1', 'AKT1', 'AKT2', 'AKT3', 'ALDH18A1', 'ANAPC10', 'ANAPC13', 'ANAPC1', 'ANAPC2', 'ANAPC4', 'ANAPC5', 'ANAPC7', 'ANXA5', 'ARID1A', 'AR', 'ATM', 'AURKA', 'AURKB', 'BARD1', 'BCL2L1', 'BIRC5', 'BRCA1', 'BRCA2', 'BTG2', 'BTRC', 'BUB1B', 'BUB1', 'BUB3', 'RGCC', 'MLIP', 'CABLES1', 'CALM1', 'CAPRIN1', 'CASP3', 'CASP9', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNF', 'CCNG1', 'CCNH', 'CCNK', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CDC16', 'CDC20', 'CDC23', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC26', 'CDC27', 'CDC45', 'CDC6', 'CDC7', 'CDCA2', 'CDCA5', 'CDCA8', 'CDH1', 'CDK12', 'CDK13', 'CDK14', 'CDK15', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CENPA', 'CENPE', 'CHAF1A', 'CHD1L', 'CHEK1', 'CHEK2', 'CINP', 'CKS1B', 'CKS2', 'COPS5', 'CREBBP', 'CSK', 'CTNNB1', 'CUL1', 'CUL3', 'CUL4B', 'DBF4B', 'DBF4', 'DGCR8', 'DICER1', 'DTL', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'EBNA1BP2', 'ECT2', 'EGFR', 'EGF', 'ELAVL1', 'ELSPBP1', 'EP400', 'ERBB2', 'ERBB3', 'ERBB4', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM58A', 'FAM83H', 'FBXO5', 'FBXW7', 'FEN1', 'FGFR1', 'FGFR2', 'FGFR3', 'FOXM1', 'FZR1', 'GAPDH', 'GLI1', 'GMNN', 'GSK3B', 'H1F0', 'HDAC1', 'HEATR3', 'HERC5', 'HIST1H1A', 'HIST1H1B', 'HIST1H4A', 'HRAS', 'IFNAR1', 'IGF1R', 'IGF1', 'ITPKB', 'JUN', 'KIF11', 'KIF20A', 'KIF23', 'KIF2C', 'KPNA2', 'KRAS', 'LATS2', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'GMNC', 'MAD2L1', 'MAPK3', 'MATK', 'MAX', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDM2', 'MEGF11', 'MELK', 'MKI67', 'KMT2D', 'KMT2B', 'MNAT1', 'MRE11A', 'MTOR', 'MYBL2', 'MYC', 'NBN', 'NF1', 'NFYB', 'NMI', 'NOTCH1', 'NOTCH3', 'NPAT', 'NRAS', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PARK2', 'PARP1', 'PCBP4', 'PCNA', 'PIK3CA', 'PIK3R1', 'PKMYT1', 'PLK1', 'PLK4', 'POLA1', 'POLD1', 'PPP1R1C', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R4', 'PRC1', 'PRKAR1A', 'PRKAR2A', 'PRMT5', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB10', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSMF1', 'PTEN', 'PTGDR', 'PTK6', 'PTTG1', 'RAD51', 'RAD54L', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RBX1', 'REL', 'REM1', 'RHOA', 'RHOBTB3', 'RINT1', 'RNASE1', 'RPRD1A', 'RPS27A', 'RRM1', 'RRM2', 'RRN3', 'RSF1', 'SHFM1', 'SKP1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'ST8SIA1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STK3', 'STK4', 'TARBP1', 'TCP1', 'TERF1', 'TERT', 'TFDP1', 'TK1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TPX2', 'TTK', 'TUBG1', 'TYMS', 'UBA52', 'UBB', 'UBC', 'UBE2C', 'UBE2QL1', 'UBE2S', 'UHRF2', 'WEE1', 'WEE2', 'XIAP', 'YAP1', 'ZNF217', 'ZNF33A', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.9588172046682858 Spearman Correlation: 0.851582619903705 Coefficient of Determination: 0.9193304319679054 RMSE: 0.14337649222999063 NRMSE: 0.03460107928421233 MAPE: 25.568557509551553 Pearson Correlation: 0.46156162806310436 Spearman Correlation: 0.38212197159565586 Coefficient of Determination: -0.6204238359108807 RMSE: 0.5754946986563761 NRMSE: 0.2348382839534711 MAPE: 168.54761910186951 Predictor: ElasticNet Pearson Correlation: 0.8889865696516766 Spearman Correlation: 0.7200227685101163 Coefficient of Determination: 0.7829799322668024 RMSE: 0.2351651879926972 NRMSE: 0.05675246470369409 MAPE: 52.9110031102862 Pearson Correlation: 0.8199797017706691 Spearman Correlation: 0.6676267783887581 Coefficient of Determination: 0.6590367702324401 RMSE: 0.2639859352826865 NRMSE: 0.10772298020186344 MAPE: 67.21152514330984 Predictor: RandomForests Pearson Correlation: 0.8598922666936342 Spearman Correlation: 0.7165518489905631 Coefficient of Determination: 0.7342954557399095 RMSE: 0.26020915735475864 NRMSE: 0.06279633114239898 MAPE: 55.39230221712956 Pearson Correlation: 0.8385204632334841 Spearman Correlation: 0.7085048252867513 Coefficient of Determination: 0.6938477614257615 RMSE: 0.2501472515840754 NRMSE: 0.10207592082921547 MAPE: 71.80999227462355 Protein: CCND1 Protein Interaction Partners Count: 857 x_train_column_count: 849 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTL6B', 'AFP', 'AHR', 'AKAP12', 'AKAP8', 'AKR1B10', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDOA', 'ALK', 'ANO1', 'ANXA5', 'APAF1', 'APC', 'APEX1', 'AREG', 'ARHGEF2', 'ARID1A', 'ARID1B', 'ARID2', 'ARID4A', 'AR', 'ASIP', 'ATF2', 'ATF3', 'ATF4', 'ATM', 'ATXN1', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'B2M', 'BANP', 'BARX2', 'BAX', 'BCAR1', 'BCAR3', 'BCCIP', 'BCL2A1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL3', 'BCL6', 'BCL9', 'BECN1', 'BGLAP', 'BHLHE40', 'BIRC2', 'BIRC3', 'BIRC5', 'BMI1', 'BMP4', 'BMP6', 'BRAF', 'BRCA1', 'BRCA2', 'BRD2', 'BRD4', 'BTC', 'BTG2', 'BTRC', 'RGCC', 'COPRS', 'CA9', 'CARD11', 'CARM1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBFB', 'CCDC62', 'CCL2', 'CCL5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNC', 'CCND2', 'CCND3', 'CCNDBP1', 'CCNE1', 'CCNE2', 'CCNG2', 'CCNH', 'CCNK', 'CCNL1', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CD19', 'CD22', 'CD24', 'CD34', 'CD38', 'CD44', 'CD5', 'CD79A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC6', 'CDC73', 'CDCA7L', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK12', 'CDK13', 'CDK14', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK20', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CDX2', 'CENPE', 'CEP57', 'CFLAR', 'CHEK1', 'CHEK2', 'CHKA', 'CHUK', 'CKS1B', 'CKS2', 'CLCN3', 'COL1A1', 'CR2', 'CREB1', 'CREBBP', 'CRKL', 'CRYAB', 'CSF2', 'CTBP1', 'CTGF', 'CTNNB1', 'CTNND1', 'CTTN', 'CUL1', 'CUL3', 'CUL7', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'CYR61', 'DACH1', 'DAXX', 'DDIT3', 'DDX53', 'DECR1', 'DHFR', 'DICER1', 'DKK1', 'DKK3', 'DLL1', 'DMTF1', 'DND1', 'DNMT1', 'DNMT3A', 'DNTT', 'DVL1', 'DVL2', 'DYRK1A', 'DYRK1B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EDN1', 'EEF1A1', 'EGFR', 'EGF', 'EGLN2', 'EGR1', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF3I', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4E', 'EIF4G1', 'ELAVL1', 'ELSPBP1', 'EP300', 'EPCAM', 'EPHA2', 'EPHA7', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EWSR1', 'EYA1', 'EZH2', 'FABP4', 'FADD', 'FAM58A', 'FAM83H', 'FASLG', 'FAT1', 'FBXO31', 'FBXO4', 'FBXW7', 'FBXW8', 'FGF13', 'FGF19', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FHL2', 'FIGF', 'FLCN', 'FLNA', 'FLT1', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXC1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FRZB', 'FSTL3', 'FZD1', 'FZD2', 'FZD7', 'FZD9', 'FZR1', 'GADD45A', 'GAL', 'GAPDH', 'GAST', 'GATA3', 'GATA4', 'GDF15', 'GDF2', 'GGNBP2', 'GGT1', 'GIT1', 'GJA1', 'GJB1', 'GLI1', 'GLI2', 'GLI3', 'GLTSCR2', 'GNB2L1', 'GPER1', 'GRB2', 'GREB1', 'GRM4', 'GRP', 'GSK3B', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HBEGF', 'HBZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC4', 'HEXIM1', 'HEY1', 'HGF', 'HIF1A', 'HIST1H2AA', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AH', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AC', 'HIST2H2BE', 'HIST2H4A', 'HIST4H4', 'HMGA2', 'HMOX1', 'HNF1A', 'HNF4A', 'HNRNPD', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB8', 'ICAM1', 'ID1', 'ID2', 'IFNAR1', 'IFNB1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP3', 'IGFBP5', 'IHH', 'IKBKB', 'IL10', 'IL17A', 'IL2', 'IL4', 'IL6', 'IL7', 'CXCL8', 'ILK', 'INSM1', 'INS', 'IRF1', 'IRS1', 'ISG15', 'ITGB1', 'ITPKB', 'ITPKC', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUNB', 'JUND', 'JUN', 'KAT2A', 'KAT2B', 'KDM1A', 'KDM5B', 'KDR', 'KHDRBS1', 'KIF18B', 'KIN', 'KITLG', 'KIT', 'KLF13', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KRAS', 'KRT10', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LDB3', 'LEF1', 'LEP', 'LGALS3', 'LGR5', 'LIMK2', 'LIMS1', 'LIN28B', 'LMNA', 'LMNB1', 'LOX', 'LRP5', 'LRP6', 'LYN', 'MAFB', 'MAF', 'MAML1', 'MAML2', 'MAML3', 'MAMLD1', 'MAP2K1', 'MAP2K2', 'MAP2K4', 'MAP2K7', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDK', 'MDM2', 'MDM4', 'MEN1', 'MET', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'MLXIPL', 'MME', 'MMP11', 'MMP14', 'MMP15', 'MMP1', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MNAT1', 'MOV10', 'MSH2', 'MST1', 'MTOR', 'MUC1', 'MYBL2', 'MYB', 'MYCN', 'MYC', 'MYEOV', 'MYF5', 'MYOD1', 'MYOG', 'NACA2', 'NADSYN1', 'NANOG', 'NCAM1', 'NCOA1', 'NCOA3', 'NCOR1', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NGF', 'NKX2-1', 'NME1-NME2', 'NME1', 'NME2', 'NMI', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NQO1', 'NR0B2', 'NR1H3', 'NR2E1', 'NR3C1', 'NR4A3', 'NRAS', 'NRF1', 'NUDT21', 'ODC1', 'ORAI1', 'ORAOV1', 'ORC4', 'PAK1', 'PAK4', 'PARK2', 'PARP1', 'PAX2', 'PAX5', 'PAX6', 'PBRM1', 'PBX3', 'PCNA', 'PDCD4', 'PDGFRA', 'PDGFRB', 'PDZK1', 'PECAM1', 'PELP1', 'PGR', 'PI3', 'PI4K2A', 'PIK3CA', 'PIK3R1', 'PKLR', 'PKM', 'PLAUR', 'PLAU', 'PLK1', 'PMAIP1', 'POLR2A', 'POTEF', 'POU2F1', 'POU5F1', 'PPARG', 'PPP2R4', 'PRDM5', 'PRKACA', 'PRL', 'PRMT5', 'PRNP', 'PROM1', 'PSAT1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTCHD3', 'PTEN', 'PTF1A', 'PTGS2', 'PTHLH', 'PTH', 'PTK2', 'PTK6', 'PTPN11', 'PTPRCAP', 'PTPRC', 'PXN', 'RAD51', 'RAF1', 'RALA', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RBX1', 'RCC1', 'RELA', 'RELB', 'REL', 'REM1', 'RET', 'RHEB', 'RHOA', 'RHOC', 'RICTOR', 'RNASE1', 'DROSHA', 'RND3', 'RNMT', 'ROCK1', 'RPRD1B', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KA6', 'RPS6KB1', 'RPS6', 'RPTOR', 'RREB1', 'RSF1', 'RUNX1', 'RUNX2', 'RUNX3', 'SDC1', 'SDHC', 'SENP1', 'SERPINE1', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHC1', 'SHFM1', 'SHH', 'SIRT1', 'SIX1', 'SIX3', 'SKP1', 'SKP2', 'SLC25A16', 'SLC25A6', 'SLC2A1', 'SLC35B2', 'SLC39A4', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMO', 'SNAI1', 'SNAI2', 'SNCA', 'SNIP1', 'SNW1', 'SNX33', 'SOCS3', 'SOX11', 'SOX17', 'SOX2', 'SOX4', 'SOX6', 'SOX9', 'SP1', 'SPN', 'SPP1', 'SPRY1', 'SRC', 'SREBF1', 'STAT1', 'STAT3', 'STAT4', 'STAT5A', 'STAT5B', 'STAT6', 'STC2', 'STIM1', 'STK11', 'STK24', 'STMN1', 'SUFU', 'SULF2', 'SUV39H1', 'TAF1', 'TBP', 'TBX2', 'TCEAL7', 'TCF4', 'TCF7L2', 'TCF7', 'TERT', 'TET3', 'TFDP1', 'TFF1', 'TGFA', 'TGFB1', 'TGFBR2', 'THBS1', 'THRA', 'THRB', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLR9', 'TM4SF1', 'TMPRSS4', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF8', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP2A', 'TP53', 'TP63', 'TP73', 'TRPV2', 'TSC22D3', 'TSC2', 'TWIST1', 'TXN', 'TYMS', 'UBA52', 'UBA7', 'UBB', 'UBC', 'UBE2C', 'UBTF', 'URGCP', 'USP18', 'USP2', 'USP9X', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VIP', 'VRK1', 'WDR77', 'WDTC1', 'WEE1', 'WHSC1', 'WIF1', 'WISP1', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'XBP1', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YY1', 'ZBTB17', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.017560913887507e-15 NRMSE: 6.501072781382215e-16 MAPE: 3.499812373081341e-12 Pearson Correlation: 0.22104097220100646 Spearman Correlation: 0.16769535779747877 Coefficient of Determination: -3.541678609163795 RMSE: 0.48803075572666965 NRMSE: 0.3077893262655586 MAPE: 1734.6953668491008 Predictor: ElasticNet Pearson Correlation: 0.6673519699044503 Spearman Correlation: 0.6398727734555205 Coefficient of Determination: 0.3972692880807176 RMSE: 0.18656422280750612 NRMSE: 0.11919361035988942 MAPE: 409.1205431696557 Pearson Correlation: 0.3990119358109959 Spearman Correlation: 0.33644559159091764 Coefficient of Determination: 0.1520044428685816 RMSE: 0.2108801886651522 NRMSE: 0.13299709174139268 MAPE: 504.84337354328187 Predictor: RandomForests Pearson Correlation: 0.5853438572361938 Spearman Correlation: 0.5430399474997273 Coefficient of Determination: 0.2722733673298181 RMSE: 0.20499857263689927 NRMSE: 0.13097109201064341 MAPE: 492.47389786485513 Pearson Correlation: 0.4825186092040556 Spearman Correlation: 0.44855671517101214 Coefficient of Determination: 0.19624330619944086 RMSE: 0.20530583584564846 NRMSE: 0.1294814807301012 MAPE: 480.5397909847869 Protein: ERBB2 Protein Interaction Partners Count: 663 x_train_column_count: 657 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACPP', 'ACTA2', 'ACTB', 'ACTG1', 'ADAM10', 'ADAM17', 'ADRB2', 'AFP', 'AGRN', 'AKT1S1', 'AKT1', 'AKT2', 'ALB', 'ALDH1A1', 'ALK', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'ANO1', 'ANXA2', 'ANXA5', 'AP2B1', 'APP', 'AREG', 'ARHGEF11', 'ARHGEF12', 'ARID1A', 'ARL6IP5', 'AR', 'ATM', 'ATP2B2', 'AURKB', 'AXIN1', 'BAG1', 'BARD1', 'BCAR1', 'BCAR3', 'BCAS1', 'BCL2L11', 'BCL2L1', 'BDNF', 'BECN1', 'BEST1', 'BIRC5', 'BLNK', 'BMI1', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BSG', 'BTC', 'MIEN1', 'CA9', 'CALU', 'CARTPT', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAV1', 'CBLB', 'CBLC', 'CBL', 'CCL27', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD19', 'CD22', 'CD247', 'CD24', 'CD274', 'CD28', 'CD33', 'CD34', 'CD44', 'CD46', 'CD52', 'CD68', 'CD6', 'CD80', 'CD82', 'CDC37', 'CDC42', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK4', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CEACAM5', 'CEP70', 'CHEK2', 'CHGA', 'CHKA', 'CHKB', 'CISH', 'CLDN3', 'CLDN4', 'CLDN7', 'CLTC', 'CNN1', 'COPS5', 'CPNE3', 'CREB1', 'CRKL', 'CRK', 'YBX3', 'CSF1', 'CSF2', 'CSF3', 'CSK', 'CSPG4', 'CTAG1B', 'CTLA4', 'CTNNB1', 'CTNND1', 'CTSB', 'CTSD', 'CTTN', 'CUL5', 'CXCL12', 'CXCR1', 'CXCR4', 'CYCS', 'CYP19A1', 'CYTIP', 'DCN', 'DDX41', 'DDX53', 'DHH', 'DIAPH1', 'DICER1', 'DLG4', 'DMTF1', 'DNAJA3', 'DNM2', 'DNMT1', 'DOCK1', 'DOCK7', 'DUSP6', 'E2F1', 'E2F3', 'EEA1', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EGFR', 'EGF', 'EIF3A', 'EIF4EBP1', 'EIF4E', 'ELAVL1', 'ELF3', 'EML4', 'ENO2', 'EP300', 'EPCAM', 'EPGN', 'EPHA2', 'EPS15', 'EPX', 'ERAL1', 'ERBB2IP', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ERRFI1', 'ESCO1', 'ESR1', 'ESR2', 'ESRRB', 'ETS1', 'ETS2', 'ETV4', 'ETV6', 'EZH2', 'EZR', 'FASLG', 'FASN', 'FBXW7', 'FCGR1A', 'FCGR1B', 'FCGRT', 'FGF10', 'FGF13', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FIGF', 'FLT1', 'FLT3LG', 'FN1', 'FOLH1', 'FOLR1', 'FOS', 'FOXA1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXP3', 'FREM2', 'FSIP1', 'FYN', 'GAB1', 'GABPB1', 'GAPDH', 'GATA3', 'GATA4', 'GDF2', 'GLI1', 'GLI2', 'GLS', 'GNA11', 'GNAQ', 'GNAS', 'GNRH1', 'GPER1', 'GRAP2', 'GRB2', 'GRB7', 'GSTP1', 'GZMB', 'H2AFX', 'H2AFY', 'HBEGF', 'HDAC1', 'HDAC6', 'HEATR6', 'HGF', 'HIF1A', 'HK1', 'HLA-A', 'HMGA2', 'HNF4A', 'HOXB7', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPG2', 'ICAM1', 'ID1', 'IDH1', 'IDH2', 'IFNG', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IHH', 'IL10', 'IL2', 'IL4', 'IL6R', 'IL6ST', 'IL6', 'CXCL8', 'ILK', 'INPP4B', 'INS', 'IQGAP1', 'IQSEC1', 'IRS1', 'ITGA5', 'ITGA6', 'ITGAV', 'ITGB1', 'ITGB3', 'ITGB4', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JUN', 'JUP', 'KDR', 'KITLG', 'KLK3', 'KLRK1', 'KRAS', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'L1CAM', 'LAMP1', 'LCN2', 'LDHA', 'LEP', 'LIN28A', 'LIN7A', 'LIN7B', 'LIN7C', 'LINGO1', 'LOX', 'LRIG1', 'LRPPRC', 'MAGEA1', 'MAGEA3', 'MAGED4B', 'MAGED4', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK8', 'MATK', 'MCL1', 'MDK', 'MDM2', 'MEMO1', 'MET', 'MGMT', 'MKI67', 'MLANA', 'MLH1', 'KMT2C', 'MME', 'MMP11', 'MMP14', 'MMP16', 'MMP1', 'MMP2', 'MMP7', 'MMP9', 'MPP1', 'MRAP', 'MRAS', 'MSH2', 'MSH6', 'MSLN', 'MTA1', 'MTOR', 'MUC13', 'MUC16', 'MUC1', 'MUC4', 'MUC6', 'MUCL1', 'MYBL2', 'MYCN', 'MYC', 'NANOG', 'NCAM1', 'NCL', 'NCOA1', 'NCOA3', 'NCOR1', 'NDRG1', 'NF1', 'NF2', 'NFE2L2', 'NGF', 'NISCH', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NR1H4', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NRP1', 'NTF3', 'NTF4', 'OPCML', 'OSMR', 'PA2G4', 'PADI2', 'PAK1', 'PALB2', 'PAQR3', 'PARP1', 'PAX2', 'PCSK9', 'PDCD1LG2', 'PDCD1', 'PDCD4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PDGFRA', 'PDPN', 'PECAM1', 'PELP1', 'PEPD', 'PFKFB3', 'PGAP3', 'PGF', 'PGR', 'PI3', 'PIK3C2A', 'PIK3C2B', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIN1', 'PIP', 'PLAUR', 'PLAU', 'PLCG1', 'PLCG2', 'PLEK', 'PLG', 'PLXNB1', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPP3CA', 'PRDM10', 'PRF1', 'PRKACA', 'PRL', 'PROM1', 'PSCA', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'PTPN1', 'PTPRC', 'PTPRO', 'PTPRU', 'PTS', 'PXN', 'RAB25', 'RAD51', 'RAF1', 'RANBP2', 'RARA', 'RASA1', 'RASA2', 'RASSF1', 'RB1', 'RBPJ', 'RDX', 'RECK', 'REM1', 'REN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'S100A14', 'SCGB2A2', 'SCUBE2', 'SDC1', 'SDHC', 'SEMA3D', 'SEMA4D', 'SERPINB5', 'SERPINE1', 'SFRP1', 'PEAK1', 'SH3BGRL3', 'SH3BGRL', 'SH3TC2', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SIAH2', 'PMEL', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC4A7', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SMUG1', 'SMYD3', 'SNAI1', 'SNAI2', 'SOCS1', 'SOS1', 'SOX10', 'SOX2', 'SOX9', 'SP3', 'SPP1', 'SPRY2', 'SRCIN1', 'SRC', 'STARD3', 'STAT1', 'STAT2', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STOM', 'STUB1', 'SYP', 'TAGLN', 'TBX1', 'TERT', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TFRC', 'TGFA', 'TGFB1', 'THBS1', 'THRA', 'TIMP1', 'TJP1', 'TMPRSS2', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF4', 'TNFRSF8', 'TNFRSF9', 'TNFSF11', 'TNF', 'TNS1', 'TNS3', 'TNS4', 'TOB1', 'TOP1', 'TOP2A', 'TP53', 'TP63', 'TSC2', 'TWIST1', 'TYMS', 'TYR', 'UBA52', 'UBB', 'UBC', 'USP2', 'USP9X', 'VAV1', 'VAV2', 'VAV3', 'VCL', 'VEGFA', 'VEGFB', 'VEGFC', 'VIM', 'WASL', 'WDFY2', 'WDTC1', 'WNT10A', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7B', 'WNT9A', 'WNT9B', 'WT1', 'WWOX', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YES1', 'YY1', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.296673970952901e-15 NRMSE: 5.616426684418115e-16 MAPE: 8.554423061473843e-12 Pearson Correlation: 0.5304989486028361 Spearman Correlation: 0.26028037791062253 Coefficient of Determination: -1.0531905297703839 RMSE: 1.4854344737912486 NRMSE: 0.26748198829388276 MAPE: 815.0945571227933 Predictor: ElasticNet Pearson Correlation: 0.9310245322365368 Spearman Correlation: 0.8583692811127401 Coefficient of Determination: 0.8612982286663045 RMSE: 0.36528557129857736 NRMSE: 0.06223240903258725 MAPE: 267.29239464317556 Pearson Correlation: 0.8150922307761688 Spearman Correlation: 0.668959299941043 Coefficient of Determination: 0.6479907064838687 RMSE: 0.6150578097025129 NRMSE: 0.11075337805713849 MAPE: 258.4367543003108 Predictor: RandomForests Pearson Correlation: 0.8618630119517803 Spearman Correlation: 0.6834204814768784 Coefficient of Determination: 0.7353579549372533 RMSE: 0.5045694318770525 NRMSE: 0.08596170705096555 MAPE: 418.16678975069743 Pearson Correlation: 0.7929419166701542 Spearman Correlation: 0.6877087999164878 Coefficient of Determination: 0.5851963572608272 RMSE: 0.6676673719782903 NRMSE: 0.12022677494477083 MAPE: 204.04317470851737 Protein: ERBB3 Protein Interaction Partners Count: 245 x_train_column_count: 247 x_train columns: ['ADAM17', 'AGRN', 'AGTR2', 'AKT1', 'AKT2', 'AKT3', 'ALAS2', 'ALB', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'APIP', 'AREG', 'AR', 'BAMBI', 'BDNF', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BTC', 'CADM4', 'CASK', 'CASP3', 'CBLB', 'CBLC', 'CBL', 'CCND1', 'CCNE1', 'CD44', 'CD82', 'CDC42', 'CDH1', 'CDK4', 'CDK5', 'CDKN1B', 'CDKN2A', 'CLEC16A', 'COMMD5', 'COQ7', 'CRKL', 'CRK', 'CRYZL1', 'CSF1', 'CSK', 'CSPG5', 'CTNNB1', 'DCN', 'DHH', 'DOCK7', 'DUSP6', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EIF4EBP1', 'EIF4E', 'EML4', 'EPCAM', 'EPGN', 'EPN1', 'ERBB2IP', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'ESR2', 'FBXO9', 'FGF10', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FIGF', 'FKBP14', 'FLNA', 'FLT3LG', 'FN1', 'FOXA1', 'FOXO3', 'FREM2', 'FTSJ1', 'GAB1', 'GAPDH', 'GLE1', 'GRB2', 'GRB7', 'GRHL2', 'HBEGF', 'HGF', 'HGS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPG2', 'IGF1', 'IGF2', 'IL6ST', 'ILK', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'ITPKB', 'JAK1', 'JAK2', 'JUN', 'KDR', 'KITLG', 'KRAS', 'L1CAM', 'LAMA1', 'LAMB1', 'LAMC2', 'LIN7A', 'LIN7B', 'LIN7C', 'LRIG1', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARCH7', 'MDM2', 'MET', 'MITF', 'MMP9', 'MRPL49', 'MTOR', 'MUC1', 'MUC4', 'MYC', 'N4BP1', 'NDRG1', 'NEDD4L', 'NEDD4', 'NF1', 'NGF', 'NICN1', 'NOTCH1', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NTF3', 'NTF4', 'OAT', 'PA2G4', 'PARK7', 'PCSK9', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PGR', 'PI3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIP5K1C', 'PLCG1', 'PLCG2', 'PPP1R9A', 'PRKACA', 'PTEN', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN22', 'PTPN2', 'RASA1', 'RASA2', 'REM1', 'RGS4', 'RHOA', 'RHOC', 'RNF41', 'ROR1', 'RRAS2', 'SH2B3', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SLC25A16', 'SMAD4', 'SNAI2', 'SOS1', 'SOX10', 'SOX2', 'SPARC', 'SPRY2', 'SRC', 'STAT3', 'STAT5A', 'STAT5B', 'SYN3', 'TCF7L2', 'TGFA', 'TMEFF2', 'TNFRSF13C', 'TNS1', 'TP53', 'USP8', 'VAV1', 'VAV2', 'VAV3', 'VEGFA', 'VEGFB', 'VEGFC', 'WNT1', 'WNT5A', 'ZEB1', 'ZNF217', 'KRBOX4', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.7525779749217283 Spearman Correlation: 0.7414768781715668 Coefficient of Determination: 0.5663736083372897 RMSE: 0.3145773849828222 NRMSE: 0.08601614490437254 MAPE: 195.56057281263236 Pearson Correlation: 0.19103946349683862 Spearman Correlation: 0.24006034987967434 Coefficient of Determination: -1.5365174079219255 RMSE: 0.6125006341478839 NRMSE: 0.301476437683228 MAPE: 423.5878774811688 Predictor: ElasticNet Pearson Correlation: 0.6318844159067284 Spearman Correlation: 0.6391066923000618 Coefficient of Determination: 0.3813577166314277 RMSE: 0.37574174212545786 NRMSE: 0.10274055822242155 MAPE: 191.44006415733404 Pearson Correlation: 0.36829722868820325 Spearman Correlation: 0.36931881943665135 Coefficient of Determination: 0.08544261049995838 RMSE: 0.3677842276305716 NRMSE: 0.1810255738533185 MAPE: 184.48609285338213 Predictor: RandomForests Pearson Correlation: 0.5779349321581143 Spearman Correlation: 0.5952826445215312 Coefficient of Determination: 0.3099301228298601 RMSE: 0.3968406749485059 NRMSE: 0.10850972329808019 MAPE: 233.0343291393106 Pearson Correlation: 0.42093925854669745 Spearman Correlation: 0.3463788156698109 Coefficient of Determination: 0.16506208829735813 RMSE: 0.3514104804695851 NRMSE: 0.17296631858007702 MAPE: 236.1590586353873 Fold: 5 Protein: RB1 Protein Interaction Partners Count: 369 x_train_column_count: 366 x_train columns: ['AATF', 'ABCC1', 'ABL1', 'ACTL6A', 'ACTL6B', 'AFAP1', 'AHR', 'AKT1', 'ANXA5', 'ARID1A', 'ARID1B', 'ARID4A', 'ARMCX1', 'ARMCX2', 'ARMCX3', 'ARNT', 'AR', 'ASF1A', 'ATF2', 'ATM', 'AURKB', 'BCR', 'BDP1', 'BGLAP', 'BRCA1', 'BRF1', 'FAM208A', 'C4BPA', 'CABIN1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CBFB', 'CBX1', 'CBX4', 'CBX5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNT2', 'CDC25A', 'CDC27', 'CDC6', 'CDH1', 'CDK14', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPA', 'CEBPB', 'CEBPD', 'CEBPE', 'CHEK1', 'CHEK2', 'CLNK', 'COL1A1', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUX1', 'DCAF10', 'DGKZ', 'DNAJA3', 'DNMT1', 'DNMT3A', 'DUSP1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EGFR', 'EGF', 'EID1', 'EIF2AK1', 'EIF2AK4', 'AGO2', 'ELF1', 'ENC1', 'EP300', 'ERBB2', 'ESD', 'ESR1', 'ESR2', 'EZH2', 'FBXW7', 'FMO5', 'FOS', 'FOXM1', 'FRK', 'FZR1', 'G6PD', 'GAPDH', 'GATA1', 'GJA1', 'GNB2L1', 'GRB2', 'GSC', 'GTF2H1', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HARS2', 'HARS', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC8', 'HDC', 'HES1', 'HIF1A', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HIST4H4', 'HMGA1', 'HMGA2', 'HRAS', 'HSP90AA1', 'HSPA1A', 'HSPA8', 'ID2', 'IFI16', 'INS', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'KDM2A', 'KDM4A', 'KDM5A', 'KDM5B', 'PPP1R26', 'KIF11', 'KRAS', 'KRT10', 'KRT14', 'KRT5', 'L3MBTL2', 'L3MBTL1', 'LIMD1', 'LIN52', 'LIN54', 'LIN9', 'LMNA', 'LOR', 'LPAR6', 'MAF', 'MAP2K7', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEF2C', 'MORF4L1', 'MRFAP1', 'MRPL11', 'MRPS18B', 'MSH6', 'MTL5', 'MYBL2', 'MYC', 'MYOD1', 'NACC2', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NCR1', 'NDC80', 'NEO1', 'NFYA', 'NFYB', 'NFYC', 'NGF', 'NOTCH1', 'NPM1', 'NRAS', 'ORC1', 'PA2G4', 'PAX2', 'PAX3', 'PAX5', 'PAX6', 'PAX8', 'PCNA', 'PELP1', 'PGR', 'PHB', 'PHF21B', 'PIAS4', 'PIK3CA', 'PIK3R1', 'PIK3R3', 'PLK1', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPIA', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP1R3A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R3B', 'PPRC1', 'PRB1', 'PRB3', 'PRB4', 'PRDM2', 'PRH1', 'PRH2', 'PRIM1', 'PRIM2', 'PRKCB', 'PRMT2', 'PSMA7', 'PSMC1', 'PSMD10', 'PTEN', 'PTGDR', 'RAF1', 'RB1CC1', 'RBAK', 'RBBP4', 'RBBP5', 'RBBP6', 'RBBP7', 'RBBP8', 'RBBP9', 'RBL1', 'RBL2', 'RBFOX2', 'RFC1', 'RPS6KB1', 'RUNX2', 'S100A6', 'SETD1B', 'SETD7', 'SIRT1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMC1A', 'SMC2', 'SMC4', 'SMC5', 'SMYD2', 'SNW1', 'SP100', 'SP1', 'SP3', 'SPI1', 'STAM', 'STAT3', 'SUV39H1', 'SUV420H2', 'SUZ12', 'TAF1', 'TBP', 'TERT', 'TFAP2A', 'TFDP1', 'TFDP3', 'TGM2', 'THAP1', 'TMPO', 'TNS1', 'TOP2A', 'TP53BP1', 'TP53', 'TP73', 'TRDMT1', 'TRIM27', 'TTK', 'UBE2I', 'UBE3A', 'UBL4A', 'UBN1', 'UBR4', 'UBTF', 'UHRF1', 'USP4', 'USP7', 'VEGFA', 'VPS39', 'WDR59', 'WDR73', 'WEE1', 'WWTR1', 'YAP1', 'YY1', 'ZBTB16', 'ZBTB7A', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.8043073491957687 Spearman Correlation: 0.752739189475409 Coefficient of Determination: 0.6469103119703244 RMSE: 0.13898954746172476 NRMSE: 0.06866292242567532 MAPE: 279.37974895088445 Pearson Correlation: 0.12511584270477508 Spearman Correlation: 0.12261250140276066 Coefficient of Determination: -8.482605621556894 RMSE: 0.7401900285290977 NRMSE: 0.3732075653596483 MAPE: 1835.153701674719 Predictor: ElasticNet Pearson Correlation: 0.5023809477999853 Spearman Correlation: 0.4790663369627758 Coefficient of Determination: 0.2094981585509521 RMSE: 0.20796539091934405 NRMSE: 0.10273802429533405 MAPE: 161.0014125769746 Pearson Correlation: 0.04651623124947577 Spearman Correlation: 0.1497250589159466 Coefficient of Determination: -0.11458935636698353 RMSE: 0.2537679851810119 NRMSE: 0.1279511048045761 MAPE: 288.97920173395175 Predictor: RandomForests Pearson Correlation: 0.6340763493930155 Spearman Correlation: 0.5201141554191631 Coefficient of Determination: 0.19381013396512958 RMSE: 0.21001885728233907 NRMSE: 0.10375246749743806 MAPE: 132.01027999309287 Pearson Correlation: 0.0005679193949936507 Spearman Correlation: 0.12012369231536554 Coefficient of Determination: -0.12763289130124789 RMSE: 0.2552485321927606 NRMSE: 0.12869760411469688 MAPE: 406.3067706836569 Protein: CDH1 Protein Interaction Partners Count: 834 x_train_column_count: 826 x_train columns: ['ABCB1', 'ABCG2', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTR3', 'ACVR1B', 'ADAM10', 'ADAM15', 'ADAM17', 'ADAM9', 'AFP', 'AIMP1', 'AJAP1', 'AKAP9', 'AKT1', 'AKT2', 'AKTIP', 'ALB', 'ALCAM', 'ALDH1A1', 'ALDH3A1', 'ALK', 'AMOTL2', 'ANAPC4', 'ANAPC7', 'ANO1', 'ANXA2', 'ANXA5', 'AP1M1', 'AP1M2', 'APC2', 'APC', 'AQP1', 'AQP5', 'AREG', 'ARF6', 'ARHGAP31', 'ARID1A', 'ARL2BP', 'ARMC7', 'ARPC1A', 'ARPC2', 'ARRB2', 'ARVCF', 'AR', 'CLMP', 'ASF1A', 'ATF2', 'ATF3', 'ATM', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BAG3', 'BANP', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL6B', 'BCL9L', 'BCORL1', 'BMI1', 'BMP2', 'BMP4', 'BMP6', 'BMP7', 'BNIP3', 'BRCA1', 'BRCA2', 'BSG', 'BTBD7', 'BTC', 'BTF3', 'ANAPC15', 'CA2', 'CA9', 'CALCA', 'CALR', 'CAPN1', 'CAPNS1', 'CASP3', 'CASP8', 'CASP9', 'CASS4', 'CAV1', 'CBLL1', 'CBL', 'CBX7', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CCR7', 'CD1A', 'CD1B', 'CD1C', 'CD1E', 'CD207', 'CD24', 'CD274', 'CD276', 'CD2AP', 'CD34', 'CD44', 'CD46', 'CD68', 'CD82', 'CDC16', 'CDC23', 'CDC27', 'CDC42', 'CDC6', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH24', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK14', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN3', 'CDX2', 'CEACAM5', 'CFL1', 'CGN', 'CHGA', 'CHL1', 'CLCA2', 'CLDN1', 'CLDN2', 'CLDN3', 'CLDN4', 'CLDN5', 'CLDN7', 'CNTN1', 'COL1A1', 'CORO1C', 'CRB3', 'CREB1', 'CREBBP', 'CRYAB', 'YBX3', 'CSDC2', 'CSE1L', 'CSF2', 'CSNK2A1', 'CSNK2A2', 'CST5', 'CTBP1', 'CTBP2', 'CTCF', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTSL', 'CTTN', 'CXCL12', 'CXCL1', 'CXCR4', 'CYP1B1', 'DAAM1', 'DAB2IP', 'DACH1', 'DAPK1', 'DAP', 'DDR1', 'DDR2', 'DDX3X', 'DICER1', 'DKK1', 'DLC1', 'DLG1', 'DLG5', 'DNM2', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOT1L', 'DPAGT1', 'DPEP1', 'DSP', 'DUOX1', 'DUSP4', 'DVL1', 'DVL2', 'E2F1', 'ECT2', 'EDN1', 'EFEMP1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'EHD1', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'ELAVL1', 'ELF3', 'ENAH', 'ENG', 'EP300', 'EPB41L3', 'EPCAM', 'EPHA10', 'EPHA1', 'EPHA2', 'EPPK1', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ESRP1', 'ESRP2', 'ETS1', 'ETS2', 'EXOC3', 'EXOC4', 'EYA2', 'EZH2', 'EZR', 'F11R', 'F2RL2', 'SUPT20H', 'FBXL5', 'FER', 'FGF10', 'FGF13', 'FGF17', 'FGF19', 'FGF2', 'FGF4', 'FGF5', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FMN1', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC1', 'FOXC2', 'FOXJ2', 'FOXK2', 'FOXL1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXQ1', 'FRMPD2', 'FSCN1', 'FUT4', 'FXYD5', 'FYN', 'FZD1', 'FZD4', 'FZD7', 'FZR1', 'G6PD', 'GAB2', 'GABPA', 'GADD45A', 'GAPDH', 'GAS6', 'GATA1', 'GATA3', 'GATA4', 'GATA6', 'GDNF', 'GFRA1', 'GGT1', 'GJA1', 'GJB1', 'GJB2', 'GKN2', 'GLI1', 'GLI2', 'GMNN', 'GNA12', 'GNA13', 'GNB2L1', 'GNL3', 'GPA33', 'GRB2', 'GRHL2', 'GRHL3', 'GSK3B', 'GSN', 'GSTP1', 'H2AFZ', 'HAVCR2', 'HBEGF', 'HDAC1', 'HDAC2', 'HEPACAM', 'HES1', 'HGF', 'HGS', 'HIF1A', 'HMGA2', 'HNF4A', 'HOXB4', 'HOXD10', 'HPGDS', 'HPGD', 'HRAS', 'HSP90AA1', 'HSPA5', 'ICAM1', 'ID1', 'ID2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP3', 'IL10', 'IL15', 'IL17A', 'IL1B', 'IL24', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IQSEC1', 'IRS1', 'IRS2', 'ITGA5', 'ITGA6', 'ITGAE', 'ITGAM', 'ITGB1', 'ITGB4', 'ITGB7', 'ITPKB', 'IVL', 'JAG1', 'JAK2', 'AJUBA', 'JUN', 'JUP', 'KDM1A', 'KDM6A', 'KDR', 'KEAP1', 'KIFC3', 'KIT', 'KLF4', 'KLF5', 'KLF8', 'KLK3', 'KLK7', 'KLRG1', 'KRAS', 'KRT10', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'KRT9', 'LAMA1', 'LAMB1', 'LAMC2', 'LASP1', 'LATS1', 'LATS2', 'LCN2', 'LEF1', 'LEP', 'LGALS3', 'LGALS4', 'LGALS9', 'LGR5', 'LIF', 'LIMA1', 'LIN28A', 'LIPG', 'LLGL2', 'LMNA', 'LOR', 'LOXL2', 'LOXL3', 'LOX', 'LRP5', 'LRP6', 'LY6K', 'MACC1', 'MACROD1', 'MAD2L2', 'MAGI1', 'MAP2K1', 'MAP2K7', 'MAP4K5', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARK2', 'MARVELD2', 'MCAM', 'MCL1', 'MDM2', 'MED1', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGAT5', 'MGMT', 'MKI67', 'MLH1', 'MLLT4', 'MME', 'MMP11', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP1', 'MMP25', 'MMP27', 'MMP2', 'MMP3', 'MMP7', 'MMP8', 'MMP9', 'MPP5', 'MRAP', 'MSH2', 'MSN', 'MT1G', 'MTA1', 'MTA3', 'MTBP', 'MTDH', 'MTOR', 'MUC1', 'MUC4', 'MYCN', 'MYC', 'MYH6', 'MYO6', 'MYO7A', 'NANOG', 'NCAM1', 'NCOA1', 'NCSTN', 'NDRG1', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEUROG3', 'NF2', 'NFE2L2', 'NFIC', 'NKD2', 'NKX2-1', 'NKX6-1', 'NKX6-2', 'NME1', 'NOG', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NR2F1', 'NRP2', 'NUDT21', 'NUMBL', 'NUMB', 'NUP98', 'NUTF2', 'OTUB1', 'OVOL1', 'OVOL2', 'PARD3', 'PARD6A', 'PAX2', 'PAX5', 'PAX6', 'PAX8', 'PCSK9', 'PDCD4', 'PDGFRB', 'PDPN', 'PEBP1', 'PECAM1', 'PGR', 'PHLPP1', 'PI3', 'PIK3CA', 'PIK3R1', 'PIP5K1A', 'PIP5K1C', 'PIP', 'PIR', 'PITX1', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAUR', 'PLAU', 'PLCD1', 'PLEKHA7', 'PLG', 'PODXL', 'POLR2C', 'POSTN', 'POTEF', 'POU5F1', 'PPARA', 'PPARGC1A', 'PPARG', 'PPL', 'PPP6C', 'PRAME', 'PRDM10', 'PRKAR1A', 'PRKCA', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRKG1', 'PRMT5', 'PROC', 'PROM1', 'PRSS8', 'PSEN1', 'PTCH1', 'PTEN', 'PTF1A', 'PTGS2', 'PTK2', 'PTPN11', 'PTPN14', 'PTPRC', 'PTPRF', 'PTPRJ', 'PTPRM', 'PTPRS', 'PTPRT', 'PTPRU', 'PTRH2', 'PVRL1', 'PVRL2', 'PVR', 'PXN', 'RAB11A', 'RAB25', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RACGAP1', 'RAF1', 'RALA', 'RALBP1', 'RALGDS', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RARB', 'RASSF1', 'RB1', 'RBM4', 'RCOR1', 'RDX', 'REM1', 'RET', 'RHOA', 'RHOB', 'RHOC', 'RHOD', 'RICTOR', 'RND3', 'ROCK1', 'ROCK2', 'RPS6KB1', 'RPTOR', 'RRM2', 'RUNX2', 'RUNX3', 'S100A14', 'S100A4', 'S100A8', 'SATB1', 'SCRIB', 'SDC1', 'SDC4', 'SDHC', 'SELE', 'SELL', 'SELP', 'SEMA3C', 'SEMA3F', 'SENP1', 'SERPINB4', 'SERPINB5', 'SERPINE1', 'SFN', 'SFRP1', 'SFRP2', 'SFTPC', 'SHH', 'SIK1', 'SIN3A', 'SIRT1', 'SIRT2', 'SIRT4', 'SIRT7', 'SIX1', 'SIX2', 'SKIL', 'SKP2', 'SLC2A1', 'SLC39A6', 'SLC6A3', 'SLC9A3R1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SNAI1', 'SNAI2', 'SNAI3', 'SNX16', 'SNX1', 'SOX10', 'SOX17', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPARC', 'SPDEF', 'SPINT1', 'SPP1', 'SPRY1', 'SRCIN1', 'SRC', 'SRXN1', 'ST14', 'ST7L', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STX4', 'STYK1', 'SUCLG2', 'SUMO1', 'SUZ12', 'SYNJ2', 'SYP', 'TACC3', 'TACSTD2', 'TATDN1', 'TBX1', 'TBX3', 'TCF15', 'TCF4', 'TDGF1', 'TERT', 'TET2', 'TFF1', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBI', 'TGFBR1', 'TGFBR2', 'THBS1', 'THEM4', 'THUMPD1', 'THY1', 'TIAM1', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLN1', 'TLR4', 'TMPRSS2', 'TMPRSS4', 'TNFRSF6B', 'TNF', 'TNK2', 'TNS1', 'TP53BP1', 'TP53BP2', 'TP53', 'TRIM21', 'TRIM29', 'TRIM44', 'TRIP10', 'TRPS1', 'TSPYL2', 'TWIST1', 'TWIST2', 'TYRP1', 'T', 'UBE2I', 'UBE2S', 'USP48', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VEZT', 'VHL', 'VIM', 'VIPAS39', 'VPS33B', 'VTN', 'WASL', 'WDFY2', 'WDTC1', 'WIF1', 'WISP1', 'WISP3', 'WNT10A', 'WNT10B', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT9A', 'WNT9B', 'WT1', 'XIAP', 'YAP1', 'YBX1', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.087583738761086e-15 NRMSE: 6.508684020829091e-16 MAPE: 2.371432746386891e-12 Pearson Correlation: 0.23632121487605298 Spearman Correlation: 0.23772116859312464 Coefficient of Determination: -1.6629308198615411 RMSE: 1.8957968360479733 NRMSE: 0.3728140717091057 MAPE: 3656.273063656458 Predictor: ElasticNet Pearson Correlation: 0.8961491487637296 Spearman Correlation: 0.8451426131670126 Coefficient of Determination: 0.7827599003181815 RMSE: 0.5248515228809552 NRMSE: 0.08357242171920562 MAPE: 177.5212596343804 Pearson Correlation: 0.5208141533741616 Spearman Correlation: 0.5290415092457512 Coefficient of Determination: 0.24987947658904464 RMSE: 1.0061839282784273 NRMSE: 0.19786905435063762 MAPE: 712.4282897251985 Predictor: RandomForests Pearson Correlation: 0.788576550081762 Spearman Correlation: 0.7253160999707672 Coefficient of Determination: 0.6162045281612716 RMSE: 0.6976159285262893 NRMSE: 0.11108180130032311 MAPE: 131.10301937609051 Pearson Correlation: 0.6418639317155875 Spearman Correlation: 0.6048379655606679 Coefficient of Determination: 0.40310484279219416 RMSE: 0.8975546056304294 NRMSE: 0.17650677580193694 MAPE: 314.70180366790146 Protein: CDH2 Protein Interaction Partners Count: 472 x_train_column_count: 467 x_train columns: ['ABCG2', 'ABL1', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTR3', 'ADAM10', 'ADH1A', 'AFP', 'AHSG', 'AKT1', 'AKT3', 'ALB', 'ALCAM', 'ALDH1A1', 'AMBN', 'AMELX', 'AMOTL1', 'AMTN', 'ANGPT1', 'ANO8', 'ANXA5', 'APC2', 'APC', 'APLP2', 'APOA1', 'APOA2', 'APOA5', 'APOB', 'APOE', 'APOL1', 'APPL1', 'APP', 'ARHGAP32', 'ARMC7', 'ARPC5', 'ARVCF', 'AR', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BCL2L1', 'BDNF', 'BMI1', 'BMP15', 'BMP2', 'BMP4', 'BMP7', 'BNIP2', 'BOC', 'BPIFB2', 'RGCC', 'GSKIP', 'C3', 'C4A', 'CABLES1', 'CADM1', 'CALU', 'CASP3', 'CAV1', 'CBLL1', 'CCNA2', 'CCNB1', 'CCND1', 'CD24', 'CD34', 'CD44', 'CD80', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK4', 'CDK5', 'CDK6', 'CDKN2A', 'CDON', 'CDX2', 'CEBPZ', 'CFL1', 'CHGB', 'CHL1', 'CHRDL1', 'CKAP4', 'CLDN11', 'CLDN3', 'CLDN4', 'CLDN7', 'CORT', 'CP', 'CREBBP', 'CRP', 'CSF1', 'CSK', 'CST3', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTTN', 'CXCL12', 'CXCR4', 'CYLD', 'CYR61', 'DBN1', 'DDR1', 'DDR2', 'DKK1', 'DLG4', 'DLG5', 'DMP1', 'DNAJC3', 'DSP', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EFNB2', 'EFNB3', 'EGFR', 'EGF', 'EHMT2', 'EIF2AK3', 'ENAM', 'ENG', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA4', 'EPHB2', 'EPS8', 'ERBB2', 'ERBB4', 'ESR1', 'ESRP1', 'EXOC4', 'EZH2', 'EZR', 'F11R', 'F5', 'EVA1A', 'FAM20A', 'FAM20C', 'FBN1', 'FER', 'FGA', 'FGF13', 'FGF23', 'FGF2', 'FGFR1', 'FGFR4', 'FGG', 'FN1', 'FOXC2', 'FOXD3', 'FOXO1', 'FOXP4', 'FSTL1', 'FSTL3', 'FUCA2', 'GAA', 'GAPDH', 'GAS6', 'GATA4', 'GFAP', 'GJA10', 'GJA1', 'GJA3', 'GJB6', 'GJC1', 'GJC3', 'GJD3', 'GJD4', 'GLI1', 'GOLM1', 'GPC3', 'GRIA1', 'GRIA2', 'HGF', 'HMGA2', 'HNF4A', 'HRAS', 'HRC', 'HSP90B1', 'HSPA5', 'IARS2', 'IGF1R', 'IGF1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL1B', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'INVS', 'IQGAP1', 'ISL1', 'ITGA6', 'ITGB1', 'ITIH2', 'ITPKB', 'JAG1', 'JAM3', 'JUN', 'JUP', 'KCNA5', 'KDR', 'KIAA2022', 'KIF5B', 'KIT', 'KLF4', 'KNG1', 'KRAS', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT8', 'KTN1', 'L1CAM', 'LAMB1', 'LAMB2', 'LAMC1', 'LEF1', 'LGALS1', 'LRP5', 'LRP6', 'LRRC7', 'LTBP1', 'LTBP3', 'MAP1B', 'MAP2K6', 'MAP2K7', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MATN3', 'MBTPS1', 'MCAM', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEPE', 'MET', 'MFGE8', 'MFI2', 'MGAT4A', 'MIA3', 'MKI67', 'MLLT4', 'MMP14', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MPDZ', 'MPP5', 'MRAP', 'MRPL49', 'MSLN', 'MSN', 'MTHFD1', 'MUC1', 'MUC4', 'MXRA8', 'MYC', 'MYO10', 'MZF1', 'NANOG', 'NCAM1', 'NCSTN', 'NDRG1', 'NENF', 'NES', 'NFASC', 'NGF', 'NKX2-5', 'NLGN1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTUM', 'NRCAM', 'NT5C', 'NT5E', 'NTRK2', 'NUCB1', 'NUMBL', 'NUMB', 'OLFM3', 'P4HB', 'PARD3', 'PAX6', 'PCSK9', 'PC', 'PDGFRB', 'PDIA4', 'PDIA6', 'PECAM1', 'PENK', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PITX2', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PNPLA2', 'POU5F1', 'PPT2', 'PRKCDBP', 'PRKCSH', 'PROC', 'PROM1', 'PRPH', 'PRSS23', 'PSEN1', 'PTEN', 'PTK2', 'PTPN11', 'PTPN1', 'PTPN2', 'PTPRC', 'PTPRS', 'PVRL1', 'PVRL2', 'PVRL3', 'PXN', 'QSOX1', 'RAB11FIP1', 'RAB3D', 'RAB5A', 'RAC1', 'RCN1', 'RELN', 'REM1', 'RHOA', 'RHOB', 'RHOC', 'ROBO1', 'PTBP3', 'RPS6KB1', 'RUNX2', 'S100A14', 'S100A4', 'SARS2', 'SCARB2', 'SCG2', 'SCG3', 'SDC2', 'SEMA3A', 'SENP3', 'SERPINA10', 'SERPINA1', 'SERPINC1', 'SERPIND1', 'SERPINE1', 'SHH', 'SHISA5', 'SIRT7', 'SKP1', 'SLC2A1', 'SLC9A3R1', 'SLIT1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SNAI1', 'SNAI2', 'SNAI3', 'SOX10', 'SOX18', 'SOX1', 'SOX2', 'SOX4', 'SOX9', 'SP7', 'SPAG9', 'SPARCL1', 'SPARC', 'SPP1', 'SPP2', 'SRC', 'ST6GALNAC5', 'STAT3', 'STC2', 'SYP', 'TBX1', 'TCF3', 'TEK', 'TF', 'TGFB1', 'TGFBR1', 'TGM2', 'TGOLN2', 'THY1', 'TIMP1', 'TJP1', 'TJP3', 'TMEM132A', 'TNC', 'TNF', 'TNNT1', 'TP53', 'TRPS1', 'TSC2', 'TWIST1', 'TWIST2', 'USP9X', 'VANGL2', 'VCAM1', 'VCAN', 'VCL', 'VEGFA', 'VGF', 'VIM', 'VTN', 'VWA1', 'WFS1', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7A', 'XIRP1', 'ZBTB16', 'ZEB1', 'ZEB2', 'ZSCAN1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.9576202102829539 Spearman Correlation: 0.9455075383606956 Coefficient of Determination: 0.9170364671423684 RMSE: 0.10344346315653843 NRMSE: 0.05080470662371123 MAPE: 960.3187939186266 Pearson Correlation: 0.18861470900534186 Spearman Correlation: 0.1565383066352501 Coefficient of Determination: -24.23309541655275 RMSE: 2.0951575260530033 NRMSE: 0.7834854163203273 MAPE: 43812.40700386535 Predictor: ElasticNet Pearson Correlation: 0.6502074656392534 Spearman Correlation: 0.6432038468349494 Coefficient of Determination: 0.36661017532254214 RMSE: 0.28582155267793075 NRMSE: 0.14037697199446525 MAPE: 479.28211779722886 Pearson Correlation: 0.0906114544271775 Spearman Correlation: 0.0806669418159729 Coefficient of Determination: -0.0739323514640915 RMSE: 0.43223494853420713 NRMSE: 0.16163451883185578 MAPE: 2404.90337909171 Predictor: RandomForests Pearson Correlation: 0.6021582315836356 Spearman Correlation: 0.5617286652517202 Coefficient of Determination: 0.20085054070881014 RMSE: 0.32105056459340875 NRMSE: 0.15767917322008188 MAPE: 536.6719195525947 Pearson Correlation: 0.10266061103142113 Spearman Correlation: 0.14329622974889847 Coefficient of Determination: -0.007535790577082979 RMSE: 0.4186601816746719 NRMSE: 0.15655822660459282 MAPE: 1426.542024985386 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.5673091310268193 Spearman Correlation: 0.5626739259885083 Coefficient of Determination: 0.3218396501464048 RMSE: 0.16780377651762476 NRMSE: 0.11772729452041925 MAPE: 709.9636165398706 Pearson Correlation: 0.331186113594164 Spearman Correlation: 0.42593299168318816 Coefficient of Determination: -0.15607735928306354 RMSE: 0.2401935505272332 NRMSE: 0.21670490578878662 MAPE: 496.54759058394626 Predictor: ElasticNet Pearson Correlation: 0.4923049629334327 Spearman Correlation: 0.5091713554089479 Coefficient of Determination: 0.2217221338812324 RMSE: 0.1797640621326156 NRMSE: 0.1261183575606272 MAPE: 555.3355400238473 Pearson Correlation: 0.4047295719345903 Spearman Correlation: 0.44003790570954754 Coefficient of Determination: 0.14881029149837532 RMSE: 0.20610146363178342 NRMSE: 0.1859467007387142 MAPE: 199.38122280190262 Predictor: RandomForests Pearson Correlation: 0.5532215556161209 Spearman Correlation: 0.5652630676722618 Coefficient of Determination: 0.26825766681949326 RMSE: 0.17430691798156686 NRMSE: 0.1222897499449731 MAPE: 575.6799278137305 Pearson Correlation: 0.4392656012482198 Spearman Correlation: 0.4789660718961583 Coefficient of Determination: 0.17143896120733582 RMSE: 0.20334343131470894 NRMSE: 0.18345837775034865 MAPE: 212.27010258558812 Protein: PTEN Protein Interaction Partners Count: 884 x_train_column_count: 876 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ABTB1', 'ACTB', 'ACTG1', 'ADM', 'AEBP1', 'AFP', 'AKT1S1', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'AMHR2', 'ANXA2', 'ANXA5', 'APAF1', 'APC', 'ARAF', 'AREG', 'ARHGAP21', 'ARID1A', 'ARID2', 'ARL2BP', 'AR', 'ATF3', 'ATG12', 'ATG5', 'ATG7', 'ATM', 'ATRX', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'AXL', 'BAD', 'BAG5', 'BARD1', 'BAX', 'BBC3', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BIRC3', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BNIP3', 'BRAF', 'BRCA1', 'BRCA2', 'BRD4', 'BTG2', 'BTK', 'SPRTN', 'CLHC1', 'CA9', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBL', 'CBX7', 'CCL2', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD24', 'CD274', 'CD34', 'CD44', 'CD79A', 'CD79B', 'CDC14A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC7', 'CDH17', 'CDH1', 'CDH2', 'CDIPT', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CENPC', 'CFL1', 'CFLAR', 'CFTR', 'CHD1', 'CHD8', 'CHEK1', 'CHEK2', 'CHKA', 'CHORDC1', 'CHUK', 'CLTCL1', 'CLTC', 'CNOT6L', 'CREB1', 'CREBBP', 'CRP', 'CSF1R', 'CSF1', 'CSK', 'CSN2', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTGF', 'CTLA4', 'CTNNB1', 'CUL1', 'CUL3', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'DAPK1', 'DAXX', 'DBN1', 'DCAF13', 'DDIT4', 'DDR2', 'DECR1', 'DEPTOR', 'DGCR8', 'DICER1', 'DLC1', 'DLG1', 'DLG4', 'DNM1L', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOLPP1', 'DUSP1', 'DUSP6', 'DUT', 'DVL1', 'DYRK1A', 'E2F1', 'E2F2', 'E2F3', 'ECSCR', 'EGFR', 'EGF', 'EGR1', 'EIF2AK2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4EBP2', 'EIF4E', 'EIF4G1', 'EML4', 'ENDOG', 'EP300', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA3', 'EPHA4', 'EPHA5', 'EPHA7', 'EPHB1', 'EPHB2', 'EPHB3', 'EPHB4', 'ERBB2', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ESR1', 'ETS1', 'ETS2', 'ETV1', 'ETV6', 'EYA2', 'EZH2', 'EZR', 'FABP4', 'FASLG', 'FASN', 'FBXW7', 'FCGR1B', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FIG4', 'FKBP1A', 'FLCN', 'FLT1', 'FLT3', 'FLT4', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXG1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FOXP3', 'FRK', 'FYN', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GCK', 'GDF10', 'GDF2', 'GFAP', 'GJA1', 'GLI1', 'GNA11', 'GNAQ', 'GNAS', 'GNRHR', 'GRASP', 'GRB2', 'GRPR', 'GSK3A', 'GSK3B', 'GSTP1', 'H1F0', 'H2AFX', 'HAVCR2', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HES1', 'HGF', 'HIF1A', 'HIST1H2BA', 'HK1', 'HK2', 'HMGA2', 'HNF4A', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA1A', 'HSPA1B', 'HSPA2', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'ID1', 'ID4', 'IDH1', 'IDH2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL17A', 'IL21', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INPP4A', 'INPP4B', 'INPP5A', 'INPP5B', 'INPP5D', 'INPP5E', 'INPP5F', 'INPP5J', 'INPP5K', 'INPPL1', 'INSRR', 'INSR', 'INS', 'IPMK', 'IPO11', 'IQGAP1', 'IRAK1', 'IRS1', 'IRS2', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'ITPR3', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUN', 'KAT2B', 'KDM5B', 'KDM5C', 'KDM6A', 'KDR', 'KEAP1', 'ATG13', 'KIF11', 'KLLN', 'KITLG', 'KIT', 'KLF17', 'KLF2', 'KLF4', 'KLK3', 'KPNA1', 'KPNA2', 'KPNA5', 'KPNA6', 'KPNA7', 'KRAS', 'KRT14', 'KRT5', 'KRT8', 'LASP1', 'LATS1', 'LATS2', 'LCK', 'LDHA', 'LEF1', 'LEP', 'LGALS3', 'LIG4', 'LOX', 'LRIG1', 'LRP1B', 'LRRK2', 'LYN', 'LYPD1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAN2C1', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K3', 'MAP2K4', 'MAP2K7', 'MAP3K1', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK4', 'MAPK6', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAP1', 'MAPT', 'MARCH2', 'MARCH3', 'MAST1', 'MAST2', 'MAST3', 'MAST4', 'MATK', 'MCL1', 'MCM2', 'MCM7', 'MCRS1', 'MDK', 'MDM2', 'MDM4', 'MECOM', 'MECP2', 'MED12', 'MEN1', 'MET', 'MGMT', 'MINPP1', 'MITF', 'MKI67', 'MKRN1', 'MLH1', 'MLH3', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT1', 'MLST8', 'MME', 'MMP2', 'MMP9', 'MOV10', 'MRAP', 'MRE11A', 'MSH2', 'MSH6', 'MTDH', 'MTMR2', 'MTOR', 'MTSS1', 'MUTYH', 'MVP', 'MYCN', 'MYC', 'MYLK', 'MYOCD', 'NANOG', 'NCKAP1', 'NCOA3', 'NCOR2', 'NDFIP1', 'NDFIP2', 'NDRG1', 'NDRG2', 'NEDD4L', 'NEDD4', 'NES', 'NF1', 'NF2', 'NFATC1', 'NFATC4', 'NFE2L2', 'NFKBIA', 'NGFR', 'NKX3-1', 'NLGN3', 'NLGN4X', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR1H4', 'NR3C2', 'NRAS', 'NRP2', 'NTRK1', 'NTRK2', 'NUMB', 'OCRL', 'OLIG2', 'OTUD3', 'PALB2', 'PARD3', 'PARD6A', 'PARD6B', 'PARD6G', 'PARK2', 'PARK7', 'PARP1', 'PAX8', 'PBK', 'PBRM1', 'PCGF2', 'PCSK9', 'PDCD1', 'PDCD4', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PDK1', 'PDK2', 'PDPK1', 'PDZK1', 'PECAM1', 'PGM3', 'PGR', 'PHF6', 'PHLPP1', 'PHLPP2', 'PI3', 'PI4K2A', 'PI4K2B', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIK3R5', 'PIKFYVE', 'PINK1', 'PIP4K2A', 'PIP4K2B', 'PIP4K2C', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PIP5KL1', 'PKM', 'PLCB1', 'PLCB2', 'PLCB3', 'PLCB4', 'PLCD1', 'PLCD3', 'PLCD4', 'PLCE1', 'PLCG1', 'PLCG2', 'PLCH1', 'PLCH2', 'PLCZ1', 'PLEKHA1', 'PLEK', 'PLK1', 'PLK2', 'PLK3', 'BPIFA1', 'PMAIP1', 'PML', 'PMPCA', 'PMS1', 'PMS2', 'POLE', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPM1D', 'PPP2R1A', 'PPP2R4', 'PPP2R5A', 'PPP2R5E', 'PPP3CA', 'PPP6C', 'PRDX1', 'PREX2', 'PRKAA1', 'PRKAA2', 'PRKCI', 'PRKCZ', 'PRKDC', 'PRMT5', 'PROM1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTER', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPMT1', 'PTPN11', 'PTPN12', 'PTPN13', 'PTPN1', 'PTPRC', 'PTPRD', 'PTS', 'PXN', 'RAB7A', 'RAC1', 'RAC2', 'RAD51C', 'RAD51D', 'RAD51', 'RAD52', 'RAF1', 'RASA1', 'RASSF1', 'RB1CC1', 'RB1', 'RBL1', 'RBL2', 'RBM38', 'RBFOX2', 'RCN1', 'RECK', 'RELA', 'REL', 'REM1', 'RETN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'DROSHA', 'RNF146', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KB1', 'RPS6KB2', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'RRM1', 'RSL1D1', 'RUNX3', 'RWDD3', 'SACM1L', 'SALL4', 'SCAI', 'SCGB1D4', 'SCRIB', 'SDHB', 'SDHC', 'SERPINA1', 'SERPINA4', 'SERPINB5', 'SESN1', 'SESN2', 'SETD2', 'SGK1', 'SGK2', 'SGK3', 'SHANK2', 'SHARPIN', 'SHC1', 'SHFM1', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT5', 'SIRT6', 'SIRT7', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC2A4', 'SLC34A2', 'SLC9A3R1', 'SLC9A3R2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNCA', 'SNX27', 'SOCS1', 'SOCS3', 'SOD2', 'SOS1', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPOP', 'SPRY1', 'SPRY2', 'SRBD1', 'SRC', 'SREBF1', 'SRF', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STMN1', 'STUB1', 'STX16', 'SUCLG2', 'SUMO1', 'SYK', 'SYNJ1', 'SYNJ2', 'TACSTD2', 'TBX1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TEP1', 'TERT', 'TET1', 'TGFB1', 'TGFBR1', 'TGFBR2', 'TGM2', 'THBS1', 'TIMP1', 'TIMP3', 'TJP1', 'TLR4', 'TMEM55A', 'TMEM55B', 'TMPRSS2', 'TNFRSF10B', 'TNFSF10', 'TNF', 'TNKS2', 'TNKS', 'TNPO2', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TPM1', 'TRAF6', 'TRIM27', 'TRIM29', 'TSC1', 'TSC2', 'TTN', 'TUT1', 'TWIST1', 'TWSG1', 'TXN', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2E1', 'UBE2I', 'UBE2L3', 'UBE3A', 'ULK1', 'ULK2', 'USP10', 'USP13', 'USP18', 'USP28', 'USP7', 'USP8', 'UTF1', 'UVRAG', 'VCL', 'VDR', 'VEGFA', 'VHL', 'WDR18', 'WDTC1', 'WEE1', 'WIPI1', 'WIPI2', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT9A', 'WNT9B', 'WT1', 'WWP1', 'WWP2', 'XIAP', 'XPO1', 'XPO5', 'YAP1', 'YES1', 'YWHAB', 'YWHAZ', 'YY1', 'ZEB1', 'ZEB2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.6801039819306065e-15 NRMSE: 4.1906089937152786e-16 MAPE: 5.503130733275266e-12 Pearson Correlation: 0.25940994002342793 Spearman Correlation: 0.29515330615094953 Coefficient of Determination: -1.1869071056816702 RMSE: 1.0672707409258408 NRMSE: 0.2064513194300992 MAPE: 2453.0907523033625 Predictor: ElasticNet Pearson Correlation: 0.8212964069697251 Spearman Correlation: 0.7806544648176774 Coefficient of Determination: 0.6324933107309616 RMSE: 0.34495777452205145 NRMSE: 0.053937577127988655 MAPE: 283.763930536479 Pearson Correlation: 0.4081387934614546 Spearman Correlation: 0.4487063429718576 Coefficient of Determination: 0.14358415200107333 RMSE: 0.6678851438110088 NRMSE: 0.12919474307702894 MAPE: 787.4149573484663 Predictor: RandomForests Pearson Correlation: 0.583943117832684 Spearman Correlation: 0.5486244683326287 Coefficient of Determination: 0.2918667854306157 RMSE: 0.4788404119275386 NRMSE: 0.07487145835783576 MAPE: 265.0430365616203 Pearson Correlation: 0.36465827677182217 Spearman Correlation: 0.42090313410669816 Coefficient of Determination: 0.12179672007937525 RMSE: 0.6763273699304017 NRMSE: 0.13082779517378554 MAPE: 389.50128558337383 Protein: BRCA2 Protein Interaction Partners Count: 361 x_train_column_count: 351 x_train columns: ['ABL1', 'ACHE', 'ADRB1', 'ADRB2', 'AKT1', 'ALK', 'APEX1', 'ARID1A', 'ARPC1A', 'AR', 'ATAD5', 'ATM', 'ATRIP', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'B3GALTL', 'BACH1', 'BARD1', 'BCCIP', 'BCHE', 'BDNF', 'BECN1', 'BIRC5', 'BLM', 'BMI1', 'BRCA1', 'BRCC3', 'BRE', 'BRIP1', 'SLX4', 'BUB1B', 'BUB1', 'BUB3', 'SFR1', 'RHNO1', 'RMI2', 'BABAM1', 'MMS22L', 'CASC1', 'CASC5', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCNE1', 'CDC25A', 'CDC25C', 'CDC45', 'CDC6', 'CDH1', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CENPE', 'CENPF', 'CEP55', 'CHEK1', 'CHEK2', 'CHRNA1', 'CLSPN', 'CNTROB', 'CREM', 'CSMD3', 'CTNNB1', 'CYP19A1', 'DMC1', 'DNA2', 'DSN1', 'DYNC1LI2', 'EGFR', 'EGF', 'ELAC2', 'EME1', 'EME2', 'ENAM', 'EPCAM', 'ERBB2', 'ERBB3', 'ERCC1', 'ERCC2', 'ERCC4', 'ERCC5', 'ERCC6', 'ERCC8', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM175A', 'FANCA', 'FANCB', 'FANCC', 'FANCD2', 'FANCE', 'FANCF', 'FANCG', 'FANCI', 'FANCL', 'FANCM', 'FBN1', 'FBXO18', 'FBXW7', 'FEN1', 'FGFR2', 'FHIT', 'FLNA', 'FOXM1', 'GAPDH', 'GEN1', 'SLX1B', 'H2AFX', 'HELQ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HMG20A', 'HMG20B', 'HMMR', 'HNRNPC', 'HOXB13', 'HRAS', 'HUS1', 'ITPKB', 'KAT2B', 'KAT5', 'KEAP1', 'SPIDR', 'KIF23', 'KIF4A', 'KIT', 'KLK3', 'KRAS', 'KRT5', 'LIG1', 'LIG3', 'LIG4', 'LIMD1', 'LSP1', 'MAD2L2', 'MAGED1', 'MAMSTR', 'MAP2K2', 'MAP3K1', 'MCM10', 'MCPH1', 'MDC1', 'MDM2', 'MDM4', 'MEN1', 'MGMT', 'MKI67', 'MLH1', 'MLH3', 'KMT2C', 'MND1', 'MORF4L1', 'MRE11A', 'MRPL36', 'MSH2', 'MSH3', 'MSH4', 'MSH5', 'MSH6', 'MTA2', 'FAN1', 'MUC1', 'MUS81', 'MUTYH', 'MYC', 'NBN', 'NCAPG', 'NEDD4', 'NF1', 'NHEJ1', 'NNT', 'NOTCH1', 'NSL1', 'NSMCE4A', 'OBFC1', 'OGG1', 'PALB2', 'PARG', 'PARP1', 'PARP2', 'PARP3', 'PAXIP1', 'PCNA', 'PDLIM7', 'PDS5A', 'PDS5B', 'PGR', 'PIK3CA', 'PLCB4', 'PLEC', 'PLEKHH1', 'PLK1', 'PMS1', 'PMS2', 'PNOC', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'POLN', 'POLQ', 'PRDM9', 'PRKDC', 'PRSS1', 'PSMC3IP', 'PSMD3', 'PSMD6', 'PTEN', 'RAD17', 'RAD18', 'RAD1', 'RAD21', 'RAD23B', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD52', 'RAD54B', 'RAD54L', 'RAD9A', 'RAD9B', 'RAG2', 'RASSF1', 'RBBP8', 'RBMX', 'RECQL4', 'RECQL5', 'RECQL', 'RET', 'REV1', 'REV3L', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RNF168', 'RNF8', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SKP2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCAL1', 'SMARCB1', 'SMC1A', 'SMC2', 'SMC3', 'SMC4', 'SMC5', 'SMC6', 'SMUG1', 'SNAI2', 'SP1', 'SPO11', 'STAT5A', 'STK11', 'STRA13', 'SUV39H1', 'SYCP3', 'TBCE', 'TDP1', 'TERT', 'TEX15', 'TMPRSS2', 'TNS1', 'TOP1', 'TOP2A', 'TOP3A', 'TOP3B', 'TOPBP1', 'TOX3', 'TP53BP1', 'TP53', 'TPX2', 'TRIP12', 'PRSS58', 'TTK', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2D1', 'UBE2E2', 'UBE2E3', 'UBE2N', 'UBE2T', 'UIMC1', 'USF1', 'USP11', 'USP15', 'USP1', 'USP21', 'USP4', 'UVRAG', 'VEGFA', 'VWF', 'WDR48', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WTIP', 'XPA', 'XPO1', 'XRCC1', 'XRCC2', 'XRCC3', 'XRCC4', 'XRCC5', 'XRCC6', 'ZFYVE26', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.8240679147120225 Spearman Correlation: 0.7947389600724982 Coefficient of Determination: 0.6790879280578208 RMSE: 0.11356343490033394 NRMSE: 0.0731605314223443 MAPE: 297.74445718179885 Pearson Correlation: -0.14048628212506686 Spearman Correlation: -0.05916532625095077 Coefficient of Determination: -9.140957032063362 RMSE: 0.5289036478890223 NRMSE: 0.6916937787079347 MAPE: 589.8526398955961 Predictor: ElasticNet Pearson Correlation: 0.5046446876088871 Spearman Correlation: 0.47510925934674114 Coefficient of Determination: 0.21784080693622987 RMSE: 0.17729360456117743 NRMSE: 0.11421717156461746 MAPE: 177.53100214819105 Pearson Correlation: 0.2364695446687363 Spearman Correlation: 0.20561104253170243 Coefficient of Determination: -0.05169580293318665 RMSE: 0.17032647614898616 NRMSE: 0.22275090060679545 MAPE: 220.65315010131422 Predictor: RandomForests Pearson Correlation: 0.5967051634387273 Spearman Correlation: 0.5202651014399465 Coefficient of Determination: 0.20324158471494347 RMSE: 0.1789405724108568 NRMSE: 0.11527819127773027 MAPE: 157.09843984941992 Pearson Correlation: 0.27878727461735503 Spearman Correlation: 0.2302846668911084 Coefficient of Determination: -0.0012394713016894432 RMSE: 0.1661904532246455 NRMSE: 0.21734185996814948 MAPE: 162.93063913830878 Protein: CDKN2A Protein Interaction Partners Count: 612 x_train_column_count: 605 x_train columns: ['ABCC1', 'ABL1', 'ACAP1', 'ACAP2', 'ACP5', 'ACTA1', 'ACTB', 'ACTG1', 'ADAMTS9', 'ADAP1', 'AFP', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD12', 'ANXA5', 'AP3D1', 'AP3S1', 'AP3S2', 'APAF1', 'APBA1', 'APBA2', 'ARAP1', 'ARAP2', 'ARF1', 'ARF3', 'ARF4', 'ARF5', 'ARF6', 'ARFGAP1', 'ARFGAP3', 'ARFIP2', 'ARFRP1', 'ARID1A', 'ARID2', 'ARID5B', 'ARL10', 'ARL1', 'ARL2', 'ARL3', 'ARL4A', 'ARL5A', 'AR', 'ASAP1', 'ATM', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'AXIN1', 'BAP1', 'BCL2L11', 'BCL2L1', 'BCL6', 'BECN1', 'BIRC5', 'BMI1', 'BRAF', 'BRCA1', 'BRCA2', 'BUB1B', 'RGCC', 'C1QBP', 'RABL6', 'CACNA1G', 'CADM1', 'CAMK1D', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNL1', 'CD274', 'CD34', 'CD44', 'CDC123', 'CDC20', 'CDC25A', 'CDC25C', 'CDC42', 'CDC45', 'CDC5L', 'CDC6', 'CDC7', 'CDH13', 'CDH17', 'CDH1', 'CDH2', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5RAP3', 'CDK6', 'CDK7', 'CDKAL1', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDX2', 'CEACAM5', 'CEBPB', 'CEBPE', 'CHEK1', 'CHEK2', 'CHFR', 'CHKA', 'COMMD1', 'CRABP1', 'CREBBP', 'CSF1R', 'CSF1', 'CSF2', 'CTBP1', 'CTBP2', 'CTCF', 'CTLA4', 'CTNNB1', 'CTSK', 'CUL1', 'CUL3', 'CXCR4', 'CYCS', 'CYLD', 'CYTH1', 'CYTH2', 'CYTH3', 'DAB2IP', 'DAP', 'DAXX', 'DICER1', 'DIRAS3', 'DLEC1', 'DMTF1', 'DNAH3', 'DNMT1', 'DNMT3A', 'DNMT3B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EBF1', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EP300', 'EPCAM', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ETS1', 'ETV6', 'EWSR1', 'EZH1', 'EZH2', 'FAT1', 'FBXW7', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FKBP2', 'FLT3', 'FMN2', 'FN1', 'FOS', 'FOXA1', 'FOXM1', 'FOXN2', 'FOXO1', 'FOXO3', 'FTO', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GATA4', 'GATA5', 'GBF1', 'GDF15', 'GGA1', 'GGA2', 'GGA3', 'GIT1', 'GIT2', 'GLI1', 'GLTSCR2', 'GMNN', 'GNA11', 'GNAQ', 'GNAS', 'GNL3', 'GOLPH3', 'GP5', 'GSPT1', 'GSTP1', 'H2AFX', 'H2AFZ', 'H3F3A', 'H3F3B', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC9', 'HELLS', 'HGF', 'HHEX', 'HIC1', 'HIF1A', 'HIST1H2BA', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AA3', 'HIST2H2AC', 'HIST2H4A', 'HIST4H4', 'HLTF', 'HMGA2', 'HNF4A', 'HNRNPD', 'HOPX', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA4', 'HSPA9', 'HUWE1', 'ID1', 'IDH1', 'IDH2', 'IGF1R', 'IGF1', 'IGF2BP2', 'IGF2R', 'IGF2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING4', 'INS', 'IQSEC1', 'IRS1', 'ISOC2', 'ITGAM', 'JAK1', 'JAK2', 'JAK3', 'JAZF1', 'JUNB', 'JUN', 'KAT2B', 'KAT5', 'KCNJ11', 'KCNQ1', 'KDM1A', 'KDM2B', 'KDM6A', 'KDM6B', 'KDR', 'KEAP1', 'KIAA1549', 'KIT', 'KLF4', 'KRAS', 'KRT19', 'KRT20', 'KRT5', 'KRT7', 'LATS2', 'LOX', 'LRRK2', 'MACROD2', 'MAF', 'MAP2K1', 'MAP2K4', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MAX', 'MC1R', 'MCL1', 'MCM10', 'MCM2', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEN1', 'MEOX1', 'MEOX2', 'MET', 'MGMT', 'MITF', 'MKRN1', 'MLANA', 'MLH1', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT3', 'MME', 'MMP2', 'MMP7', 'MMP9', 'MOV10', 'MRAS', 'MSH2', 'MSH6', 'MTA1', 'MTAP', 'MTHFR', 'MTNR1B', 'MTOR', 'MUC1', 'MYBL2', 'MYCL', 'MYCN', 'MYC', 'MYOD1', 'KAT6A', 'NANOG', 'NCAM1', 'NCL', 'NCOR1', 'NES', 'NEUROG1', 'NF1', 'NF2', 'NFATC1', 'NFE2L2', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NPM1', 'NRAS', 'NSUN2', 'ORC4', 'ORC5', 'OSBP2', 'P2RY8', 'PA2G4', 'PALB2', 'PARP1', 'PAX3', 'PAX5', 'PAX8', 'PBRM1', 'PCGF2', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PEX19', 'PGR', 'PHLDB1', 'PI3', 'PIAS2', 'PIGF', 'PIK3CA', 'PIK3R1', 'PIP4K2A', 'PLEKHA3', 'PLEKHA8', 'PLEK', 'PLK1', 'PMAIP1', 'PML', 'PMS2', 'POTEF', 'POU5F1', 'PPARA', 'PPARG', 'PPM1D', 'PPP1R9B', 'PPP3CA', 'PRDM2', 'PRMT6', 'PROM1', 'PRSS1', 'PSMC3', 'PSMD10', 'PSME3', 'PTCH1', 'PTEN', 'PTER', 'PTF1A', 'PTGS2', 'PTPN11', 'PTPRC', 'PTPRD', 'PXN', 'RAB11A', 'RAB5A', 'RABEP1', 'RABGEF1', 'RAC2', 'RAD51', 'RAF1', 'RAP2B', 'RARB', 'RASSF1', 'RASSF2', 'RB1', 'RBL1', 'RBL2', 'RCC1', 'RELA', 'RELB', 'REL', 'RET', 'RHOA', 'DROSHA', 'RNF2', 'RNF43', 'ROS1', 'RPL11', 'RPRM', 'RPS27A', 'RPS6KB1', 'RRAS2', 'RRAS', 'RTEL1', 'RUNX2', 'RUNX3', 'SDHC', 'SENP1', 'SENP3', 'SERPINE1', 'SERTAD1', 'SETD2', 'SFN', 'SFRP1', 'SFRP2', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SIX2', 'SKP2', 'SLC30A8', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SNAI1', 'SNAI2', 'SNCA', 'SOCS1', 'SOX2', 'SP1', 'SPEN', 'SRC', 'STAT1', 'STAT3', 'STK11', 'STK25', 'STK33', 'STMN1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUV39H1', 'SUZ12', 'SYNE1', 'SYP', 'TBL1XR1', 'TBRG1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TERT', 'TET2', 'TFDP1', 'TFPI2', 'TGFBR2', 'THADA', 'THBS1', 'TIMP3', 'TMCO1', 'TMEM115', 'TNFRSF10B', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TRADD', 'TRIM28', 'TRIP12', 'PRSS58', 'TSC2', 'TSPAN8', 'TTF1', 'TWIST1', 'TWSG1', 'TYR', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2I', 'UBE3A', 'UCHL1', 'USP7', 'UTF1', 'VEGFA', 'VHL', 'WDTC1', 'WEE1', 'WFS1', 'WHSC1', 'WIF1', 'WRN', 'WT1', 'WWOX', 'XRCC1', 'YY1', 'ZBTB17', 'ZBTB7A', 'ZEB1', 'ZFP91', 'ZNF148', 'ZNF217', 'ZNF227', 'ZNF410', 'ZNF420', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.4215953095337e-15 NRMSE: 1.1259186956109345e-15 MAPE: 2.7328132789926964e-12 Pearson Correlation: 0.12617568825183523 Spearman Correlation: 0.15242833451788676 Coefficient of Determination: -10.825255664697892 RMSE: 2.083731158684516 NRMSE: 0.5243278122554833 MAPE: 1594.4105670708402 Predictor: ElasticNet Pearson Correlation: 0.844657298069175 Spearman Correlation: 0.8058099464389795 Coefficient of Determination: 0.6961899475656208 RMSE: 0.3746367098894852 NRMSE: 0.09539780242150321 MAPE: 155.92401049252197 Pearson Correlation: 0.44544041847428256 Spearman Correlation: 0.4616042594047308 Coefficient of Determination: 0.1100067638998602 RMSE: 0.5716494229242983 NRMSE: 0.1438437439733017 MAPE: 272.94688252188456 Predictor: RandomForests Pearson Correlation: 0.7129606556304533 Spearman Correlation: 0.634889099049554 Coefficient of Determination: 0.5031252242250144 RMSE: 0.4791072424451144 NRMSE: 0.12200026544908824 MAPE: 183.28052453077407 Pearson Correlation: 0.37242994363311455 Spearman Correlation: 0.36588353809698415 Coefficient of Determination: -0.05028040350463403 RMSE: 0.6209963500124829 NRMSE: 0.15626087667962127 MAPE: 454.1511108229819 Protein: TP53 Protein Interaction Partners Count: 1000 x_train_column_count: 991 x_train columns: ['ABCB1', 'ABCC1', 'ABL1', 'ACTB', 'ACTL6A', 'ADAM17', 'AFP', 'AGT', 'AICDA', 'AIFM2', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD2', 'ANXA1', 'ANXA2', 'ANXA5', 'APAF1', 'APBB1', 'APC', 'APEX1', 'APOBEC3B', 'APP', 'ARID1A', 'ARID3A', 'AR', 'ASF1A', 'ASXL1', 'ATF2', 'ATF3', 'ATG7', 'ATM', 'ATN1', 'ATRIP', 'ATRX', 'ATR', 'ATXN3', 'AURKA', 'AURKB', 'AXIN1', 'AXL', 'BACE1', 'BAG1', 'BAG2', 'BAIAP2L1', 'BAK1', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2A1', 'BCL2L11', 'BCL2L12', 'BCL2L14', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BID', 'BIRC3', 'BIRC5', 'BIRC6', 'BLM', 'BMF', 'BMI1', 'BMX', 'BNIP3L', 'BNIP3', 'BRCA1', 'BRCA2', 'BRCC3', 'BRD1', 'BRD4', 'BRD7', 'BRE', 'BRIP1', 'BRPF1', 'BRPF3', 'BTG2', 'BTK', 'BUB1B', 'BUB1', 'RHNO1', 'RGCC', 'RMI2', 'CNOT11', 'SETD9', 'CA9', 'CABIN1', 'CABLES1', 'CAPN1', 'CARM1', 'CASP10', 'CASP1', 'CASP2', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBX2', 'CBX4', 'CBX6', 'CBX8', 'CCDC106', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNG2', 'CCNH', 'CCNK', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CD24', 'CD274', 'CD34', 'CD40LG', 'CD40', 'CD44', 'CD82', 'CDC20', 'CDC25A', 'CDC25C', 'CDH17', 'CDH1', 'CDK12', 'CDK13', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CEACAM5', 'CEBPB', 'CENPJ', 'CFL1', 'CFLAR', 'CHD3', 'CHD4', 'CHD8', 'CHEK1', 'CHEK2', 'CHUK', 'CISH', 'CITED2', 'CLSPN', 'CLU', 'CNOT10', 'CNOT1', 'CNOT2', 'CNOT3', 'CNOT4', 'CNOT6L', 'CNOT6', 'CNOT7', 'CNOT8', 'COPS5', 'CREB1', 'CREBBP', 'CRYAB', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK1G1', 'CSNK1G2', 'CSNK1G3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTCF', 'CTGF', 'CTNNB1', 'CUL4A', 'CUL7', 'CUL9', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP1A1', 'DACH1', 'DAPK1', 'DAP', 'DAXX', 'DDB1', 'DDB2', 'DDIT4', 'DDX17', 'DDX3X', 'DDX5', 'DECR1', 'DGCR8', 'DHCR24', 'DHFR', 'DIABLO', 'DICER1', 'DKK1', 'DMTF1', 'DNA2', 'DNAJA3', 'DNAJB1', 'DNMT1', 'DNMT3A', 'DNTT', 'DPYD', 'DRAM1', 'DTL', 'DUSP1', 'DUSP2', 'DYRK1A', 'DYRK2', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EEF1A1', 'EEF1A2', 'EGFR', 'EGF', 'EGR1', 'EHMT1', 'EHMT2', 'EI24', 'EIF2AK2', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4EBP1', 'ELANE', 'ELAVL1', 'ELL3', 'ELL', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHA3', 'EPHB2', 'ERBB2', 'ERBB4', 'ERCC1', 'ERCC2', 'ERCC3', 'ERCC6', 'ESR1', 'ETS1', 'ETS2', 'EWSR1', 'EXO1', 'EZH2', 'F2', 'FADD', 'AMER1', 'FAM175B', 'FANCC', 'FANCD2', 'FASLG', 'FAS', 'FBL', 'FBXO11', 'FBXO4', 'FBXW7', 'FGF1', 'FGF2', 'FGFR3', 'FHIT', 'FHL2', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FSCN1', 'FUT4', 'FZR1', 'G3BP1', 'G6PD', 'GADD45A', 'GADD45B', 'GADD45G', 'GAPDH', 'GATAD2A', 'GATAD2B', 'GDF15', 'GFI1', 'GLS2', 'GLTSCR2', 'GNL3', 'GRAMD4', 'GRB10', 'GRB14', 'GSK3B', 'GSTP1', 'GTF2H1', 'GTSE1', 'H1F0', 'H2AFX', 'HAMP', 'HCK', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC5', 'HDAC7', 'HDAC8', 'HDAC9', 'HERC5', 'HIC1', 'HIF1A', 'HIPK1', 'HIPK2', 'HIPK3', 'HIPK4', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HK2', 'HMGA1', 'HMGA2', 'HMGB1', 'HMGB2', 'HMMR', 'HMOX1', 'HNF4A', 'HNRNPK', 'HNRNPL', 'HOXA5', 'HPGDS', 'HRAS', 'HSF1', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA1A', 'HSPA1B', 'HSPA1L', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'HSPB1', 'HSPB2', 'HTT', 'HUS1', 'HUWE1', 'ICAM1', 'ID2', 'ID4', 'IDH1', 'IDH2', 'IFI16', 'IFNAR1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IGFBP7', 'IKBKB', 'IL17A', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING2', 'ING3', 'ING4', 'ING5', 'INSIG1', 'INS', 'IRF1', 'ISG15', 'ITPKB', 'JAG1', 'JAK2', 'JMY', 'JUN', 'KAT2A', 'KAT2B', 'KAT5', 'KDM1A', 'KDM6A', 'KDM6B', 'KDR', 'KHDRBS1', 'CCAR2', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KPNA2', 'KRAS', 'KRT14', 'KRT17', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'L3MBTL1', 'LAMA4', 'LEP', 'LGALS7B', 'LGALS7', 'LIF', 'LIG4', 'LIN28A', 'PIDD1', 'LRRK2', 'LYN', 'MAF1', 'MAF', 'MAGEA2', 'MAP1LC3B', 'MAP2K1', 'MAP2K3', 'MAP2K7', 'MAP3K1', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MBD3', 'MCL1', 'MCM7', 'MDC1', 'MDH1', 'MDM2', 'MDM4', 'MEAF6', 'MECOM', 'MELK', 'MET', 'MGMT', 'MIF', 'MKI67', 'MKRN1', 'MLH1', 'KMT2D', 'KMT2C', 'MMP13', 'MMP1', 'MMP2', 'MMP9', 'MOV10', 'MRE11A', 'MSH2', 'MSH6', 'MSX1', 'MT1A', 'MT2A', 'MTA1', 'MTA2', 'MTA3', 'MTOR', 'MUC1', 'MUTYH', 'MYBBP1A', 'MYB', 'MYCN', 'MYC', 'MYOCD', 'KAT8', 'KAT6A', 'NANOG', 'NBN', 'NCL', 'NCOA3', 'NCOR1', 'NCOR2', 'NDN', 'NDRG1', 'NEDD8', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFE2L2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NFKBIB', 'NFYA', 'NFYB', 'NFYC', 'NGFR', 'NKX2-1', 'NLK', 'NLRC4', 'NME1', 'NOC2L', 'NOS3', 'NOTCH1', 'NOTCH3', 'NOTCH4', 'NOX4', 'NPM1', 'NQO1', 'NR1I2', 'NR2E1', 'NR3C1', 'NR4A1', 'NR4A2', 'NRAS', 'NUAK1', 'NUMB', 'NUPR1', 'OGG1', 'OLIG2', 'OPN1SW', 'OSGIN1', 'OTUB1', 'OTUB2', 'OTUD5', 'PADI4', 'PALB2', 'PARK2', 'PARK7', 'PARP1', 'PATZ1', 'PAX2', 'PAX3', 'PAX8', 'PBK', 'PBRM1', 'PCBP4', 'PCNA', 'PDCD4', 'PDCD5', 'PDGFRA', 'PDGFRB', 'PDLIM7', 'PER2', 'PERP', 'PGR', 'PHB', 'PHC1', 'PHC2', 'PHC3', 'PHF20', 'PHGDH', 'PI3', 'PIAS1', 'PIAS2', 'PIAS4', 'PIK3CA', 'PIN1', 'PKM', 'PLAGL1', 'PLAU', 'PLK1', 'PLK2', 'PLK3', 'PLK4', 'PMAIP1', 'PML', 'PMS2', 'POLI', 'POLK', 'POU4F1', 'POU4F2', 'POU5F1', 'PPARGC1A', 'PPARG', 'PPIF', 'PPM1D', 'PPP1R13B', 'PPP1R13L', 'PPP1R15A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R4', 'PPP2R5C', 'PRDM1', 'PRDM2', 'PRDX1', 'PRELID1', 'PRIMA1', 'PRKAA1', 'PRKAA2', 'PRKAB1', 'PRKAB2', 'PRKAG1', 'PRKAG2', 'PRKAG3', 'PRKCA', 'PRKCD', 'PRKCZ', 'PRKD1', 'PRKDC', 'PRKG1', 'PRMT1', 'PRMT5', 'PROM1', 'PSEN1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTBP1', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2', 'PTTG1', 'RABGGTA', 'RABGGTB', 'RAD17', 'RAD1', 'RAD50', 'RAD51', 'RAD9A', 'RAD9B', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP4', 'RBBP6', 'RBBP7', 'RBBP8', 'RBL1', 'RBL2', 'RBM38', 'RBPJ', 'RCHY1', 'RCOR1', 'RECQL4', 'RELA', 'REM1', 'REST', 'RET', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RFFL', 'RFWD2', 'RING1', 'RMI1', 'DROSHA', 'RNF20', 'RNF2', 'RNF34', 'RNF43', 'ROCK1', 'RPA1', 'RPA2', 'RPA3', 'RPL11', 'RPL22', 'RPL26', 'RPL5', 'RPRM', 'RPS14', 'RPS19', 'RPS27A', 'RPS27L', 'RPS3', 'RPS6KB1', 'RQCD1', 'RRAD', 'RRM2B', 'RRM2', 'RUNX2', 'RUNX3', 'S100A2', 'S100A4', 'S100A6', 'S100B', 'SALL4', 'SCO2', 'SDHC', 'SENP1', 'SENP3', 'SERPINB5', 'SERPINE1', 'SESN1', 'SESN2', 'SESN3', 'SETD2', 'SETD7', 'SETD8', 'SETDB1', 'SFN', 'SRSF1', 'SGK1', 'SHFM1', 'SHH', 'SHISA5', 'SIK1', 'SIN3A', 'SIN3B', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SKP2', 'SLC2A14', 'SLC2A1', 'SLC2A2', 'SLC2A3', 'SLC6A6', 'SLMO1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMG1', 'SMG7', 'SMYD2', 'SNAI1', 'SNAI2', 'SOCS1', 'SOCS3', 'SOD2', 'SORT1', 'SOX2', 'SOX4', 'SP100', 'SP1', 'SP3', 'SP7', 'SPATA18', 'SPP1', 'SQSTM1', 'SRC', 'SREBF1', 'SREBF2', 'SSRP1', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STEAP3', 'STK11', 'STMN1', 'STUB1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUMO4', 'SUPT16H', 'SUV39H1', 'SUZ12', 'SYK', 'SYP', 'TADA3', 'TAF10', 'TAF11', 'TAF12', 'TAF13', 'TAF15', 'TAF1L', 'TAF1', 'TAF2', 'TAF3', 'TAF4B', 'TAF4', 'TAF5', 'TAF6', 'TAF7L', 'TAF7', 'TAF9B', 'TBPL1', 'TBPL2', 'TBP', 'TCHP', 'TCP1', 'TDG', 'TERT', 'TET2', 'TFAM', 'TFAP2A', 'TFAP2C', 'TFDP1', 'TFF1', 'TGFB1', 'TGM2', 'THBS1', 'TIMP3', 'TLR3', 'TLR9', 'TMEM219', 'TNFAIP3', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF10C', 'TNFRSF10D', 'TNF', 'TNK2', 'TNKS1BP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOE1', 'TOP1', 'TOP2A', 'TOP3A', 'TOPBP1', 'TOPORS', 'TP53AIP1', 'TP53BP1', 'TP53BP2', 'TP53I3', 'TP53INP1', 'TP53RK', 'TP63', 'TP73', 'TPT1', 'TPX2', 'TRAF6', 'TRIAP1', 'TRIM24', 'TRIM28', 'TRIM29', 'TRIM32', 'TRIM59', 'TRIM8', 'TRRAP', 'TSC2', 'TTC5', 'TTK', 'TWIST1', 'TWIST2', 'TXN', 'TYMS', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2D1', 'UBE2E1', 'UBE2I', 'UBE2K', 'UBE2N', 'UBE2Q1', 'UBE2S', 'UBE3A', 'UBN1', 'UCHL1', 'UHRF1', 'USF1', 'USP10', 'USP15', 'USP24', 'USP3', 'USP42', 'USP7', 'UTP14A', 'VEGFA', 'VHL', 'VPRBP', 'VRK1', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WWOX', 'XAF1', 'XIAP', 'XPA', 'XPO1', 'XRCC1', 'XRCC5', 'XRCC6', 'YBX1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'YY1', 'YY2', 'ZBTB33', 'ZBTB7A', 'ZEB1', 'ZEB2', 'ZKSCAN4', 'ZNF148', 'ZNF274', 'ZNF385A', 'ZNF420', 'ZNF668', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.90481734829142e-15 NRMSE: 4.844521346655358e-16 MAPE: 5.5766875101550224e-12 Pearson Correlation: 0.29125161757924295 Spearman Correlation: 0.2647589122058879 Coefficient of Determination: -0.91460538018527 RMSE: 0.7307914543665126 NRMSE: 0.19573897264403714 MAPE: 666.3673772503494 Predictor: ElasticNet Pearson Correlation: 0.8059411013598181 Spearman Correlation: 0.7310229504131425 Coefficient of Determination: 0.617157291258752 RMSE: 0.26221884607983814 NRMSE: 0.06669011065384119 MAPE: 555.6428487699768 Pearson Correlation: 0.554282690707815 Spearman Correlation: 0.501265601815484 Coefficient of Determination: 0.2981080283672427 RMSE: 0.4424752264326671 NRMSE: 0.11851485909539765 MAPE: 183.53729923998944 Predictor: RandomForests Pearson Correlation: 0.6473419135768366 Spearman Correlation: 0.5829555053484536 Coefficient of Determination: 0.3686496893514176 RMSE: 0.3367355055168576 NRMSE: 0.08564193024157726 MAPE: 809.5838682394865 Pearson Correlation: 0.5088654518041784 Spearman Correlation: 0.44548435766032 Coefficient of Determination: 0.2238460603250575 RMSE: 0.4652943252108043 NRMSE: 0.12462684484017794 MAPE: 142.51385308320772 Protein: CTNNB1 Protein Interaction Partners Count: 992 x_train_column_count: 984 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACAN', 'ACP1', 'ACTA1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTN4', 'ACVR1B', 'ACVR1', 'ADAM10', 'ADCY7', 'ADIPOQ', 'AES', 'AFP', 'AHI1', 'AHR', 'AHSA1', 'AJAP1', 'AK9', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'ALPL', 'AMHR2', 'AMH', 'ANXA5', 'AP1M1', 'APC2', 'APCS', 'APC', 'APH1A', 'APH1B', 'AQP1', 'ARHGAP10', 'ARHGAP21', 'ARHGAP32', 'ARHGEF4', 'ARID1A', 'ARID2', 'ARMC7', 'ARMC8', 'ARVCF', 'ARX', 'AR', 'ASCL1', 'ASF1A', 'ASH2L', 'ASIP', 'ATF4', 'ATM', 'AURKA', 'AXIN1', 'AXIN2', 'BAG3', 'BCAR1', 'BCL2L1', 'BCL3', 'BCL6', 'BCL9L', 'BCL9', 'BDNF', 'BGLAP', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BMPR1B', 'BNIP2', 'BRAF', 'BRCA1', 'BRCA2', 'BRMS1L', 'BTRC', 'HILPDA', 'AK8', 'CA2', 'CA9', 'CABLES1', 'CACYBP', 'CALM1', 'CALM3', 'CARM1', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBLL1', 'CBL', 'CBY1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CD24', 'CD34', 'CD40', 'CD44', 'CDC27', 'CDC42', 'CDC73', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH16', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH26', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDHR5', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK8', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDON', 'CDX1', 'CDX2', 'CEBPA', 'CHD8', 'CHRD', 'CHUK', 'CITED1', 'CKAP5', 'CLCA1', 'CLDN3', 'CLDN5', 'COL1A1', 'COPS3', 'COPS5', 'COPS6', 'CREB1', 'CREBBP', 'CRKL', 'CRK', 'CRP', 'CRYAB', 'CSNK1A1L', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK2A3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNAL1', 'CTNNBIP1', 'CTNND1', 'CTNND2', 'CTTN', 'CUL1', 'CUL4A', 'CUL4B', 'CXCR4', 'CXXC4', 'DAB2', 'DACT1', 'DACT2', 'DACT3', 'DCT', 'DCX', 'DDB1', 'DDX39A', 'DDX3X', 'DDX5', 'DHODH', 'DHX9', 'DKK1', 'DKK2', 'DKK3', 'DKK4', 'DLG1', 'DLG2', 'DLG4', 'DLG5', 'DLGAP1', 'DLL4', 'DLX1', 'DNM2', 'DNMT1', 'DPYD', 'DSC1', 'DSC2', 'DSC3', 'DSG1', 'DSG2', 'DSG3', 'DSG4', 'DSP', 'DUSP6', 'DVL1', 'DVL2', 'DVL3', 'E2F3', 'ECM1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'ELAVL1', 'EMD', 'ENAH', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHB2', 'EPHB3', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EXOC3', 'EXOC4', 'EYA4', 'EZH2', 'EZR', 'F2RL2', 'FAF1', 'AMER1', 'FANCA', 'FASLG', 'FAS', 'FAT1', 'FAT4', 'FBXW11', 'FBXW7', 'FERMT2', 'FER', 'FGF10', 'FGF13', 'FGF2', 'FGF3', 'FGF4', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FLT3', 'FMN1', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC2', 'FOXG1', 'FOXL1', 'FOXL2', 'FOXM1', 'FOXN3', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FRAT1', 'FRAT2', 'FRZB', 'FSCN1', 'FSTL1', 'FSTL3', 'FURIN', 'FUS', 'FXR1', 'FYN', 'FZD10', 'FZD1', 'FZD2', 'FZD3', 'FZD4', 'FZD5', 'FZD6', 'FZD7', 'FZD8', 'FZD9', 'GAPDH', 'GATA2', 'GATA4', 'GCG', 'GDF2', 'GDNF', 'GFRA1', 'GJA1', 'GLI1', 'GLI2', 'GLI3', 'GLIS2', 'GLUL', 'GNA11', 'GNA12', 'GNA13', 'GNAQ', 'GNAS', 'GPC3', 'GRIA2', 'GRIP1', 'GSK3A', 'GSK3B', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HAS2', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC7', 'HERC5', 'HES7', 'HGF', 'HGS', 'HHEX', 'HIC1', 'HIF1A', 'HINT1', 'HIPK2', 'HIST1H1C', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HMGB1', 'HNF1A', 'HNF4A', 'HNRNPA1', 'HNRNPA2B1', 'HNRNPK', 'HNRNPM', 'HOXA10', 'HOXB4', 'HPGD', 'HRAS', 'HSP90AB1', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPD1', 'HTRA1', 'HTT', 'HUWE1', 'IBSP', 'IDH1', 'IDH2', 'IFNB1', 'IFRD1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP4', 'IHH', 'IKBKB', 'IL6', 'CXCL8', 'ILK', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IRF3', 'ISG15', 'ISL1', 'ITGAE', 'ITGB1', 'ITGB7', 'ITK', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'AJUBA', 'JUN', 'JUP', 'KANK1', 'KAT2A', 'KAT2B', 'KAT5', 'KCNN1', 'KCTD1', 'KDM1A', 'KDR', 'KIF18B', 'KIF3A', 'KIF5B', 'KIFC3', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KRAS', 'KREMEN1', 'KRIT1', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LATS2', 'LDB1', 'LDHB', 'LDLR', 'LEF1', 'LEO1', 'LGR4', 'LGR5', 'LGR6', 'LHCGR', 'LHX8', 'LIF', 'LIMA1', 'LMNA', 'LMNB1', 'LOX', 'LRP4', 'LRP5L', 'LRP5', 'LRP6', 'LRRFIP1', 'LRRK2', 'LZTFL1', 'MACF1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8IP1', 'MAPK8', 'MAPK9', 'MDFIC', 'MDFI', 'MDK', 'MDM2', 'MED12', 'MED1', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'KMT2D', 'MLLT10', 'MLLT11', 'MLLT4', 'MLLT6', 'KMT2A', 'MME', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP25', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MRAP', 'MSH2', 'MSH6', 'MSN', 'MSX1', 'MSX2', 'MTDH', 'MTOR', 'MUC13', 'MUC1', 'MUTYH', 'MYCN', 'MYC', 'MYF5', 'MYO1D', 'MYO6', 'MYO7A', 'MYOD1', 'MYOG', 'NANOG', 'NCAM1', 'NCCRP1', 'NCOA2', 'NCSTN', 'NDP', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEURL2', 'NF1', 'NF2', 'NFAT5', 'NFKB1', 'NIT1', 'NKD1', 'NKX2-5', 'NLK', 'NME1', 'NOG', 'NONO', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR0B1', 'NR4A1', 'NR4A2', 'NR5A1', 'NR5A2', 'NRAS', 'NRIP1', 'NTRK1', 'NTRK2', 'NTRK3', 'NUDT5', 'NUMB', 'NUP153', 'NUTF2', 'OTX2', 'PAK1', 'PAK2', 'PAK3', 'PANK4', 'PARD3', 'PARD6A', 'PARK2', 'PARP1', 'PAX3', 'PAX6', 'PAX7', 'PAX8', 'PDGFRA', 'PDGFRB', 'PECAM1', 'PGK1', 'PGR', 'PHB', 'JADE1', 'PI3', 'PICK1', 'PIK3CA', 'PIK3R1', 'PIK3R2', 'PIN1', 'PIP5K1A', 'PIP5K1C', 'PITX2', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAG1', 'PLEKHA7', 'PLK1', 'PML', 'PMS2', 'POLE', 'PORCN', 'POTEF', 'POU5F1', 'PPARD', 'PPARG', 'PPM1A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R2B', 'PPP2R5A', 'PPP2R5B', 'PPP2R5C', 'PPP2R5D', 'PPP2R5E', 'PRKACA', 'PRKACB', 'PRKACG', 'PRKAR1A', 'PRKCA', 'PRKCG', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRL', 'PRMT1', 'PROC', 'PROM1', 'PROP1', 'PSEN1', 'PSEN2', 'PSENEN', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTEN', 'PTGES3', 'PTGS2', 'PTH1R', 'PTH', 'PTK2', 'PTK7', 'PTMA', 'PTN', 'PTPN11', 'PTPN13', 'PTPN1', 'PTPN6', 'PTPRB', 'PTPRC', 'PTPRF', 'PTPRG', 'PTPRJ', 'PTPRK', 'PTPRM', 'PTPRU', 'PTPRZ1', 'PVRL1', 'PVRL2', 'PXN', 'PYGO1', 'PYGO2', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RALGDS', 'RANBP3', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RAPGEF2', 'RAPGEF6', 'RAPSN', 'RARA', 'RARB', 'RARG', 'RARS', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP5', 'RBMX', 'RBPJ', 'RBX1', 'RELA', 'REM1', 'RET', 'RHOA', 'RIPK2', 'RNF220', 'RNF43', 'ROBO1', 'ROCK1', 'ROCK2', 'ROR2', 'RPRD1A', 'RPS27A', 'RPSA', 'RSPO1', 'RSPO2', 'RSPO3', 'RSPO4', 'RUNX2', 'RUNX3', 'RUVBL1', 'RUVBL2', 'RXRA', 'RYK', 'S100A4', 'S100A6', 'SALL1', 'SALL4', 'SATB1', 'SCRIB', 'SDHC', 'SERPINE1', 'SETD2', 'SETD7', 'SFN', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHFM1', 'SHH', 'SIAH1', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT6', 'SKP1', 'SLC6A3', 'SLC9A3R1', 'SLCO1B3', 'SLCO2A1', 'SLIT1', 'SLK', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD5', 'SMAD7', 'SMAD9', 'SMARCA2', 'SMARCA4', 'SMARCA5', 'SMARCB1', 'SMO', 'SMURF1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNX1', 'SOST', 'SOX10', 'SOX13', 'SOX17', 'SOX1', 'SOX2', 'SOX3', 'SOX4', 'SOX6', 'SOX7', 'SOX8', 'SOX9', 'SP1', 'SP7', 'SPAG9', 'SPATA13', 'SPEN', 'SPN', 'SPP1', 'SRC', 'STAT3', 'STK11', 'STRAP', 'STX4', 'SUFU', 'SUV39H1', 'SYP', 'TADA3', 'TAX1BP3', 'TAZ', 'TBL1XR1', 'TBL1X', 'TBX5', 'TBX6', 'TCF12', 'TCF3', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TFAP2A', 'TFCP2', 'TFF1', 'TFF2', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBR1', 'TGFBR2', 'TGM2', 'TJP1', 'TJP2', 'TLE1', 'TLE2', 'TLE3', 'TLE4', 'TNFRSF11B', 'TNFSF11', 'TNF', 'TNIK', 'TNKS2', 'TNKS', 'TNS1', 'TOB1', 'TOP2A', 'TP53', 'TRAF4', 'TRIM33', 'TRIM37', 'TRIP10', 'TRRAP', 'TSC2', 'TUBA1A', 'TWIST1', 'TYMS', 'T', 'UBA52', 'UBB', 'UBC', 'UBE2B', 'UBE2R2', 'UBE3A', 'UBR5', 'UCHL1', 'UMPS', 'UPRT', 'USP4', 'USP7', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VAV2', 'VAV3', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VHL', 'VIM', 'WDR64', 'WDTC1', 'WHSC1', 'WIF1', 'WISP1', 'WLS', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'WWTR1', 'XPO1', 'YAP1', 'YARS', 'YEATS4', 'YES1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'ZAP70', 'ZAR1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZIC3', 'ZNRF3', 'ZYX', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693844 Coefficient of Determination: 1.0 RMSE: 4.099570218375329e-15 NRMSE: 8.063670767850765e-16 MAPE: 4.731893591835726e-12 Pearson Correlation: 0.045180098359455384 Spearman Correlation: 0.06978890011097395 Coefficient of Determination: -5.26288048900353 RMSE: 1.6958891427641238 NRMSE: 0.5431381546713011 MAPE: 776.6728390918815 Predictor: ElasticNet Pearson Correlation: 0.8777842496588542 Spearman Correlation: 0.8618580907790954 Coefficient of Determination: 0.7424954358849862 RMSE: 0.3836217550693889 NRMSE: 0.07545667880987193 MAPE: 302.48974847831505 Pearson Correlation: 0.47775829176459456 Spearman Correlation: 0.4603074851307374 Coefficient of Determination: 0.16722958910044827 RMSE: 0.618405068658323 NRMSE: 0.1980550375380151 MAPE: 239.42311812521032 Predictor: RandomForests Pearson Correlation: 0.6583337231151551 Spearman Correlation: 0.6503205024777605 Coefficient of Determination: 0.41987365167168433 RMSE: 0.5758005266694284 NRMSE: 0.1132573813275823 MAPE: 477.1880977198457 Pearson Correlation: 0.6475541674127557 Spearman Correlation: 0.5680644397062308 Coefficient of Determination: 0.41490985198943364 RMSE: 0.518348433359178 NRMSE: 0.16601015035251138 MAPE: 188.74191841909266 Protein: CCNE1 Protein Interaction Partners Count: 350 x_train_column_count: 347 x_train columns: ['ABL1', 'AKT1', 'AKT2', 'AKT3', 'ALDH18A1', 'ANAPC10', 'ANAPC13', 'ANAPC1', 'ANAPC2', 'ANAPC4', 'ANAPC5', 'ANAPC7', 'ANXA5', 'ARID1A', 'AR', 'ATM', 'AURKA', 'AURKB', 'BARD1', 'BCL2L1', 'BIRC5', 'BRCA1', 'BRCA2', 'BTG2', 'BTRC', 'BUB1B', 'BUB1', 'BUB3', 'RGCC', 'MLIP', 'CABLES1', 'CALM1', 'CAPRIN1', 'CASP3', 'CASP9', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNF', 'CCNG1', 'CCNH', 'CCNK', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CDC16', 'CDC20', 'CDC23', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC26', 'CDC27', 'CDC45', 'CDC6', 'CDC7', 'CDCA2', 'CDCA5', 'CDCA8', 'CDH1', 'CDK12', 'CDK13', 'CDK14', 'CDK15', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CENPA', 'CENPE', 'CHAF1A', 'CHD1L', 'CHEK1', 'CHEK2', 'CINP', 'CKS1B', 'CKS2', 'COPS5', 'CREBBP', 'CSK', 'CTNNB1', 'CUL1', 'CUL3', 'CUL4B', 'DBF4B', 'DBF4', 'DGCR8', 'DICER1', 'DTL', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'EBNA1BP2', 'ECT2', 'EGFR', 'EGF', 'ELAVL1', 'ELSPBP1', 'EP400', 'ERBB2', 'ERBB3', 'ERBB4', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM58A', 'FAM83H', 'FBXO5', 'FBXW7', 'FEN1', 'FGFR1', 'FGFR2', 'FGFR3', 'FOXM1', 'FZR1', 'GAPDH', 'GLI1', 'GMNN', 'GSK3B', 'H1F0', 'HDAC1', 'HEATR3', 'HERC5', 'HIST1H1A', 'HIST1H1B', 'HIST1H4A', 'HRAS', 'IFNAR1', 'IGF1R', 'IGF1', 'ITPKB', 'JUN', 'KIF11', 'KIF20A', 'KIF23', 'KIF2C', 'KPNA2', 'KRAS', 'LATS2', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'GMNC', 'MAD2L1', 'MAPK3', 'MATK', 'MAX', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDM2', 'MEGF11', 'MELK', 'MKI67', 'KMT2D', 'KMT2B', 'MNAT1', 'MRE11A', 'MTOR', 'MYBL2', 'MYC', 'NBN', 'NF1', 'NFYB', 'NMI', 'NOTCH1', 'NOTCH3', 'NPAT', 'NRAS', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PARK2', 'PARP1', 'PCBP4', 'PCNA', 'PIK3CA', 'PIK3R1', 'PKMYT1', 'PLK1', 'PLK4', 'POLA1', 'POLD1', 'PPP1R1C', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R4', 'PRC1', 'PRKAR1A', 'PRKAR2A', 'PRMT5', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB10', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSMF1', 'PTEN', 'PTGDR', 'PTK6', 'PTTG1', 'RAD51', 'RAD54L', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RBX1', 'REL', 'REM1', 'RHOA', 'RHOBTB3', 'RINT1', 'RNASE1', 'RPRD1A', 'RPS27A', 'RRM1', 'RRM2', 'RRN3', 'RSF1', 'SHFM1', 'SKP1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'ST8SIA1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STK3', 'STK4', 'TARBP1', 'TCP1', 'TERF1', 'TERT', 'TFDP1', 'TK1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TPX2', 'TTK', 'TUBG1', 'TYMS', 'UBA52', 'UBB', 'UBC', 'UBE2C', 'UBE2QL1', 'UBE2S', 'UHRF2', 'WEE1', 'WEE2', 'XIAP', 'YAP1', 'ZNF217', 'ZNF33A', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.9598341887810986 Spearman Correlation: 0.8788919966826688 Coefficient of Determination: 0.9212816699530698 RMSE: 0.12591692181205155 NRMSE: 0.04485019476831756 MAPE: 24.72837237396705 Pearson Correlation: 0.6943581334274758 Spearman Correlation: 0.41095026122520234 Coefficient of Determination: 0.13542917823406542 RMSE: 0.6026146657078156 NRMSE: 0.1454291251074681 MAPE: 102.47606323835883 Predictor: ElasticNet Pearson Correlation: 0.8798134225214097 Spearman Correlation: 0.7382878489698538 Coefficient of Determination: 0.763151897941908 RMSE: 0.21841432393000865 NRMSE: 0.0777967315868241 MAPE: 50.926826513925725 Pearson Correlation: 0.8544289507862951 Spearman Correlation: 0.6923153655282486 Coefficient of Determination: 0.7166263822242412 RMSE: 0.3450000173543647 NRMSE: 0.083258927372726 MAPE: 85.4834923909935 Predictor: RandomForests Pearson Correlation: 0.8628866187424806 Spearman Correlation: 0.7123646669252789 Coefficient of Determination: 0.7415758280964511 RMSE: 0.22814593168750602 NRMSE: 0.08126302108192555 MAPE: 54.405867253368335 Pearson Correlation: 0.7819079210289549 Spearman Correlation: 0.7309018274919328 Coefficient of Determination: 0.5784153717310645 RMSE: 0.4208058737411625 NRMSE: 0.10155317077519187 MAPE: 76.84316764285622 Protein: CCND1 Protein Interaction Partners Count: 857 x_train_column_count: 849 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTL6B', 'AFP', 'AHR', 'AKAP12', 'AKAP8', 'AKR1B10', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDOA', 'ALK', 'ANO1', 'ANXA5', 'APAF1', 'APC', 'APEX1', 'AREG', 'ARHGEF2', 'ARID1A', 'ARID1B', 'ARID2', 'ARID4A', 'AR', 'ASIP', 'ATF2', 'ATF3', 'ATF4', 'ATM', 'ATXN1', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'B2M', 'BANP', 'BARX2', 'BAX', 'BCAR1', 'BCAR3', 'BCCIP', 'BCL2A1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL3', 'BCL6', 'BCL9', 'BECN1', 'BGLAP', 'BHLHE40', 'BIRC2', 'BIRC3', 'BIRC5', 'BMI1', 'BMP4', 'BMP6', 'BRAF', 'BRCA1', 'BRCA2', 'BRD2', 'BRD4', 'BTC', 'BTG2', 'BTRC', 'RGCC', 'COPRS', 'CA9', 'CARD11', 'CARM1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBFB', 'CCDC62', 'CCL2', 'CCL5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNC', 'CCND2', 'CCND3', 'CCNDBP1', 'CCNE1', 'CCNE2', 'CCNG2', 'CCNH', 'CCNK', 'CCNL1', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CD19', 'CD22', 'CD24', 'CD34', 'CD38', 'CD44', 'CD5', 'CD79A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC6', 'CDC73', 'CDCA7L', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK12', 'CDK13', 'CDK14', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK20', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CDX2', 'CENPE', 'CEP57', 'CFLAR', 'CHEK1', 'CHEK2', 'CHKA', 'CHUK', 'CKS1B', 'CKS2', 'CLCN3', 'COL1A1', 'CR2', 'CREB1', 'CREBBP', 'CRKL', 'CRYAB', 'CSF2', 'CTBP1', 'CTGF', 'CTNNB1', 'CTNND1', 'CTTN', 'CUL1', 'CUL3', 'CUL7', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'CYR61', 'DACH1', 'DAXX', 'DDIT3', 'DDX53', 'DECR1', 'DHFR', 'DICER1', 'DKK1', 'DKK3', 'DLL1', 'DMTF1', 'DND1', 'DNMT1', 'DNMT3A', 'DNTT', 'DVL1', 'DVL2', 'DYRK1A', 'DYRK1B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EDN1', 'EEF1A1', 'EGFR', 'EGF', 'EGLN2', 'EGR1', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF3I', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4E', 'EIF4G1', 'ELAVL1', 'ELSPBP1', 'EP300', 'EPCAM', 'EPHA2', 'EPHA7', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EWSR1', 'EYA1', 'EZH2', 'FABP4', 'FADD', 'FAM58A', 'FAM83H', 'FASLG', 'FAT1', 'FBXO31', 'FBXO4', 'FBXW7', 'FBXW8', 'FGF13', 'FGF19', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FHL2', 'FIGF', 'FLCN', 'FLNA', 'FLT1', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXC1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FRZB', 'FSTL3', 'FZD1', 'FZD2', 'FZD7', 'FZD9', 'FZR1', 'GADD45A', 'GAL', 'GAPDH', 'GAST', 'GATA3', 'GATA4', 'GDF15', 'GDF2', 'GGNBP2', 'GGT1', 'GIT1', 'GJA1', 'GJB1', 'GLI1', 'GLI2', 'GLI3', 'GLTSCR2', 'GNB2L1', 'GPER1', 'GRB2', 'GREB1', 'GRM4', 'GRP', 'GSK3B', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HBEGF', 'HBZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC4', 'HEXIM1', 'HEY1', 'HGF', 'HIF1A', 'HIST1H2AA', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AH', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AC', 'HIST2H2BE', 'HIST2H4A', 'HIST4H4', 'HMGA2', 'HMOX1', 'HNF1A', 'HNF4A', 'HNRNPD', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB8', 'ICAM1', 'ID1', 'ID2', 'IFNAR1', 'IFNB1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP3', 'IGFBP5', 'IHH', 'IKBKB', 'IL10', 'IL17A', 'IL2', 'IL4', 'IL6', 'IL7', 'CXCL8', 'ILK', 'INSM1', 'INS', 'IRF1', 'IRS1', 'ISG15', 'ITGB1', 'ITPKB', 'ITPKC', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUNB', 'JUND', 'JUN', 'KAT2A', 'KAT2B', 'KDM1A', 'KDM5B', 'KDR', 'KHDRBS1', 'KIF18B', 'KIN', 'KITLG', 'KIT', 'KLF13', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KRAS', 'KRT10', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LDB3', 'LEF1', 'LEP', 'LGALS3', 'LGR5', 'LIMK2', 'LIMS1', 'LIN28B', 'LMNA', 'LMNB1', 'LOX', 'LRP5', 'LRP6', 'LYN', 'MAFB', 'MAF', 'MAML1', 'MAML2', 'MAML3', 'MAMLD1', 'MAP2K1', 'MAP2K2', 'MAP2K4', 'MAP2K7', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDK', 'MDM2', 'MDM4', 'MEN1', 'MET', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'MLXIPL', 'MME', 'MMP11', 'MMP14', 'MMP15', 'MMP1', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MNAT1', 'MOV10', 'MSH2', 'MST1', 'MTOR', 'MUC1', 'MYBL2', 'MYB', 'MYCN', 'MYC', 'MYEOV', 'MYF5', 'MYOD1', 'MYOG', 'NACA2', 'NADSYN1', 'NANOG', 'NCAM1', 'NCOA1', 'NCOA3', 'NCOR1', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NGF', 'NKX2-1', 'NME1-NME2', 'NME1', 'NME2', 'NMI', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NQO1', 'NR0B2', 'NR1H3', 'NR2E1', 'NR3C1', 'NR4A3', 'NRAS', 'NRF1', 'NUDT21', 'ODC1', 'ORAI1', 'ORAOV1', 'ORC4', 'PAK1', 'PAK4', 'PARK2', 'PARP1', 'PAX2', 'PAX5', 'PAX6', 'PBRM1', 'PBX3', 'PCNA', 'PDCD4', 'PDGFRA', 'PDGFRB', 'PDZK1', 'PECAM1', 'PELP1', 'PGR', 'PI3', 'PI4K2A', 'PIK3CA', 'PIK3R1', 'PKLR', 'PKM', 'PLAUR', 'PLAU', 'PLK1', 'PMAIP1', 'POLR2A', 'POTEF', 'POU2F1', 'POU5F1', 'PPARG', 'PPP2R4', 'PRDM5', 'PRKACA', 'PRL', 'PRMT5', 'PRNP', 'PROM1', 'PSAT1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTCHD3', 'PTEN', 'PTF1A', 'PTGS2', 'PTHLH', 'PTH', 'PTK2', 'PTK6', 'PTPN11', 'PTPRCAP', 'PTPRC', 'PXN', 'RAD51', 'RAF1', 'RALA', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RBX1', 'RCC1', 'RELA', 'RELB', 'REL', 'REM1', 'RET', 'RHEB', 'RHOA', 'RHOC', 'RICTOR', 'RNASE1', 'DROSHA', 'RND3', 'RNMT', 'ROCK1', 'RPRD1B', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KA6', 'RPS6KB1', 'RPS6', 'RPTOR', 'RREB1', 'RSF1', 'RUNX1', 'RUNX2', 'RUNX3', 'SDC1', 'SDHC', 'SENP1', 'SERPINE1', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHC1', 'SHFM1', 'SHH', 'SIRT1', 'SIX1', 'SIX3', 'SKP1', 'SKP2', 'SLC25A16', 'SLC25A6', 'SLC2A1', 'SLC35B2', 'SLC39A4', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMO', 'SNAI1', 'SNAI2', 'SNCA', 'SNIP1', 'SNW1', 'SNX33', 'SOCS3', 'SOX11', 'SOX17', 'SOX2', 'SOX4', 'SOX6', 'SOX9', 'SP1', 'SPN', 'SPP1', 'SPRY1', 'SRC', 'SREBF1', 'STAT1', 'STAT3', 'STAT4', 'STAT5A', 'STAT5B', 'STAT6', 'STC2', 'STIM1', 'STK11', 'STK24', 'STMN1', 'SUFU', 'SULF2', 'SUV39H1', 'TAF1', 'TBP', 'TBX2', 'TCEAL7', 'TCF4', 'TCF7L2', 'TCF7', 'TERT', 'TET3', 'TFDP1', 'TFF1', 'TGFA', 'TGFB1', 'TGFBR2', 'THBS1', 'THRA', 'THRB', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLR9', 'TM4SF1', 'TMPRSS4', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF8', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP2A', 'TP53', 'TP63', 'TP73', 'TRPV2', 'TSC22D3', 'TSC2', 'TWIST1', 'TXN', 'TYMS', 'UBA52', 'UBA7', 'UBB', 'UBC', 'UBE2C', 'UBTF', 'URGCP', 'USP18', 'USP2', 'USP9X', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VIP', 'VRK1', 'WDR77', 'WDTC1', 'WEE1', 'WHSC1', 'WIF1', 'WISP1', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'XBP1', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YY1', 'ZBTB17', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 9.542516104619646e-16 NRMSE: 6.01035227792732e-16 MAPE: 4.613184896432928e-12 Pearson Correlation: 0.07420190123742484 Spearman Correlation: 0.053185201810496394 Coefficient of Determination: -2.028930117165778 RMSE: 0.4802740278352252 NRMSE: 0.30684122860379065 MAPE: 495.07043818483123 Predictor: ElasticNet Pearson Correlation: 0.6654495164110072 Spearman Correlation: 0.6420217798916356 Coefficient of Determination: 0.3994766068206629 RMSE: 0.1763896240839024 NRMSE: 0.11109897717669959 MAPE: 477.8285789711846 Pearson Correlation: 0.24227135056977744 Spearman Correlation: 0.21030935547824786 Coefficient of Determination: 0.05375292680450883 RMSE: 0.2684397028723959 NRMSE: 0.17150285766371237 MAPE: 250.25169283928017 Predictor: RandomForests Pearson Correlation: 0.5728440991861032 Spearman Correlation: 0.5777329889364351 Coefficient of Determination: 0.2922815971261987 RMSE: 0.19148656744162806 NRMSE: 0.12060778459237886 MAPE: 522.6804404874892 Pearson Correlation: 0.3191268678861373 Spearman Correlation: 0.29400117208443993 Coefficient of Determination: 0.10068807409810243 RMSE: 0.2616975466040141 NRMSE: 0.1671953761158266 MAPE: 243.61201052041503 Protein: ERBB2 Protein Interaction Partners Count: 663 x_train_column_count: 657 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACPP', 'ACTA2', 'ACTB', 'ACTG1', 'ADAM10', 'ADAM17', 'ADRB2', 'AFP', 'AGRN', 'AKT1S1', 'AKT1', 'AKT2', 'ALB', 'ALDH1A1', 'ALK', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'ANO1', 'ANXA2', 'ANXA5', 'AP2B1', 'APP', 'AREG', 'ARHGEF11', 'ARHGEF12', 'ARID1A', 'ARL6IP5', 'AR', 'ATM', 'ATP2B2', 'AURKB', 'AXIN1', 'BAG1', 'BARD1', 'BCAR1', 'BCAR3', 'BCAS1', 'BCL2L11', 'BCL2L1', 'BDNF', 'BECN1', 'BEST1', 'BIRC5', 'BLNK', 'BMI1', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BSG', 'BTC', 'MIEN1', 'CA9', 'CALU', 'CARTPT', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAV1', 'CBLB', 'CBLC', 'CBL', 'CCL27', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD19', 'CD22', 'CD247', 'CD24', 'CD274', 'CD28', 'CD33', 'CD34', 'CD44', 'CD46', 'CD52', 'CD68', 'CD6', 'CD80', 'CD82', 'CDC37', 'CDC42', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK4', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CEACAM5', 'CEP70', 'CHEK2', 'CHGA', 'CHKA', 'CHKB', 'CISH', 'CLDN3', 'CLDN4', 'CLDN7', 'CLTC', 'CNN1', 'COPS5', 'CPNE3', 'CREB1', 'CRKL', 'CRK', 'YBX3', 'CSF1', 'CSF2', 'CSF3', 'CSK', 'CSPG4', 'CTAG1B', 'CTLA4', 'CTNNB1', 'CTNND1', 'CTSB', 'CTSD', 'CTTN', 'CUL5', 'CXCL12', 'CXCR1', 'CXCR4', 'CYCS', 'CYP19A1', 'CYTIP', 'DCN', 'DDX41', 'DDX53', 'DHH', 'DIAPH1', 'DICER1', 'DLG4', 'DMTF1', 'DNAJA3', 'DNM2', 'DNMT1', 'DOCK1', 'DOCK7', 'DUSP6', 'E2F1', 'E2F3', 'EEA1', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EGFR', 'EGF', 'EIF3A', 'EIF4EBP1', 'EIF4E', 'ELAVL1', 'ELF3', 'EML4', 'ENO2', 'EP300', 'EPCAM', 'EPGN', 'EPHA2', 'EPS15', 'EPX', 'ERAL1', 'ERBB2IP', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ERRFI1', 'ESCO1', 'ESR1', 'ESR2', 'ESRRB', 'ETS1', 'ETS2', 'ETV4', 'ETV6', 'EZH2', 'EZR', 'FASLG', 'FASN', 'FBXW7', 'FCGR1A', 'FCGR1B', 'FCGRT', 'FGF10', 'FGF13', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FIGF', 'FLT1', 'FLT3LG', 'FN1', 'FOLH1', 'FOLR1', 'FOS', 'FOXA1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXP3', 'FREM2', 'FSIP1', 'FYN', 'GAB1', 'GABPB1', 'GAPDH', 'GATA3', 'GATA4', 'GDF2', 'GLI1', 'GLI2', 'GLS', 'GNA11', 'GNAQ', 'GNAS', 'GNRH1', 'GPER1', 'GRAP2', 'GRB2', 'GRB7', 'GSTP1', 'GZMB', 'H2AFX', 'H2AFY', 'HBEGF', 'HDAC1', 'HDAC6', 'HEATR6', 'HGF', 'HIF1A', 'HK1', 'HLA-A', 'HMGA2', 'HNF4A', 'HOXB7', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPG2', 'ICAM1', 'ID1', 'IDH1', 'IDH2', 'IFNG', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IHH', 'IL10', 'IL2', 'IL4', 'IL6R', 'IL6ST', 'IL6', 'CXCL8', 'ILK', 'INPP4B', 'INS', 'IQGAP1', 'IQSEC1', 'IRS1', 'ITGA5', 'ITGA6', 'ITGAV', 'ITGB1', 'ITGB3', 'ITGB4', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JUN', 'JUP', 'KDR', 'KITLG', 'KLK3', 'KLRK1', 'KRAS', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'L1CAM', 'LAMP1', 'LCN2', 'LDHA', 'LEP', 'LIN28A', 'LIN7A', 'LIN7B', 'LIN7C', 'LINGO1', 'LOX', 'LRIG1', 'LRPPRC', 'MAGEA1', 'MAGEA3', 'MAGED4B', 'MAGED4', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK8', 'MATK', 'MCL1', 'MDK', 'MDM2', 'MEMO1', 'MET', 'MGMT', 'MKI67', 'MLANA', 'MLH1', 'KMT2C', 'MME', 'MMP11', 'MMP14', 'MMP16', 'MMP1', 'MMP2', 'MMP7', 'MMP9', 'MPP1', 'MRAP', 'MRAS', 'MSH2', 'MSH6', 'MSLN', 'MTA1', 'MTOR', 'MUC13', 'MUC16', 'MUC1', 'MUC4', 'MUC6', 'MUCL1', 'MYBL2', 'MYCN', 'MYC', 'NANOG', 'NCAM1', 'NCL', 'NCOA1', 'NCOA3', 'NCOR1', 'NDRG1', 'NF1', 'NF2', 'NFE2L2', 'NGF', 'NISCH', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NR1H4', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NRP1', 'NTF3', 'NTF4', 'OPCML', 'OSMR', 'PA2G4', 'PADI2', 'PAK1', 'PALB2', 'PAQR3', 'PARP1', 'PAX2', 'PCSK9', 'PDCD1LG2', 'PDCD1', 'PDCD4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PDGFRA', 'PDPN', 'PECAM1', 'PELP1', 'PEPD', 'PFKFB3', 'PGAP3', 'PGF', 'PGR', 'PI3', 'PIK3C2A', 'PIK3C2B', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIN1', 'PIP', 'PLAUR', 'PLAU', 'PLCG1', 'PLCG2', 'PLEK', 'PLG', 'PLXNB1', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPP3CA', 'PRDM10', 'PRF1', 'PRKACA', 'PRL', 'PROM1', 'PSCA', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'PTPN1', 'PTPRC', 'PTPRO', 'PTPRU', 'PTS', 'PXN', 'RAB25', 'RAD51', 'RAF1', 'RANBP2', 'RARA', 'RASA1', 'RASA2', 'RASSF1', 'RB1', 'RBPJ', 'RDX', 'RECK', 'REM1', 'REN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'S100A14', 'SCGB2A2', 'SCUBE2', 'SDC1', 'SDHC', 'SEMA3D', 'SEMA4D', 'SERPINB5', 'SERPINE1', 'SFRP1', 'PEAK1', 'SH3BGRL3', 'SH3BGRL', 'SH3TC2', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SIAH2', 'PMEL', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC4A7', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SMUG1', 'SMYD3', 'SNAI1', 'SNAI2', 'SOCS1', 'SOS1', 'SOX10', 'SOX2', 'SOX9', 'SP3', 'SPP1', 'SPRY2', 'SRCIN1', 'SRC', 'STARD3', 'STAT1', 'STAT2', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STOM', 'STUB1', 'SYP', 'TAGLN', 'TBX1', 'TERT', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TFRC', 'TGFA', 'TGFB1', 'THBS1', 'THRA', 'TIMP1', 'TJP1', 'TMPRSS2', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF4', 'TNFRSF8', 'TNFRSF9', 'TNFSF11', 'TNF', 'TNS1', 'TNS3', 'TNS4', 'TOB1', 'TOP1', 'TOP2A', 'TP53', 'TP63', 'TSC2', 'TWIST1', 'TYMS', 'TYR', 'UBA52', 'UBB', 'UBC', 'USP2', 'USP9X', 'VAV1', 'VAV2', 'VAV3', 'VCL', 'VEGFA', 'VEGFB', 'VEGFC', 'VIM', 'WASL', 'WDFY2', 'WDTC1', 'WNT10A', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7B', 'WNT9A', 'WNT9B', 'WT1', 'WWOX', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YES1', 'YY1', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 6.415226658511559e-15 NRMSE: 1.0929394446924985e-15 MAPE: 4.49968344151228e-12 Pearson Correlation: 0.2626154207732397 Spearman Correlation: 0.21721218469058218 Coefficient of Determination: -3.2226212866028963 RMSE: 1.783079939171504 NRMSE: 0.39453035494446376 MAPE: 2142.402277191211 Predictor: ElasticNet Pearson Correlation: 0.9356785239776543 Spearman Correlation: 0.8647395476844878 Coefficient of Determination: 0.8704055341974075 RMSE: 0.370043419116447 NRMSE: 0.06304298671421828 MAPE: 228.4470646687793 Pearson Correlation: 0.7824972914720076 Spearman Correlation: 0.6402349156473273 Coefficient of Determination: 0.6047000137659461 RMSE: 0.5455607869957219 NRMSE: 0.12071264232674453 MAPE: 679.7787229784437 Predictor: RandomForests Pearson Correlation: 0.8566837515184769 Spearman Correlation: 0.6907002191586037 Coefficient of Determination: 0.7274982219685785 RMSE: 0.536591918208216 NRMSE: 0.09141726463161932 MAPE: 545.7807910694142 Pearson Correlation: 0.7987754299331115 Spearman Correlation: 0.6345402564362305 Coefficient of Determination: 0.6239960700040706 RMSE: 0.5320787808011717 NRMSE: 0.11772956760729543 MAPE: 236.99238278934894 Protein: ERBB3 Protein Interaction Partners Count: 245 x_train_column_count: 247 x_train columns: ['ADAM17', 'AGRN', 'AGTR2', 'AKT1', 'AKT2', 'AKT3', 'ALAS2', 'ALB', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'APIP', 'AREG', 'AR', 'BAMBI', 'BDNF', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BTC', 'CADM4', 'CASK', 'CASP3', 'CBLB', 'CBLC', 'CBL', 'CCND1', 'CCNE1', 'CD44', 'CD82', 'CDC42', 'CDH1', 'CDK4', 'CDK5', 'CDKN1B', 'CDKN2A', 'CLEC16A', 'COMMD5', 'COQ7', 'CRKL', 'CRK', 'CRYZL1', 'CSF1', 'CSK', 'CSPG5', 'CTNNB1', 'DCN', 'DHH', 'DOCK7', 'DUSP6', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EIF4EBP1', 'EIF4E', 'EML4', 'EPCAM', 'EPGN', 'EPN1', 'ERBB2IP', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'ESR2', 'FBXO9', 'FGF10', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FIGF', 'FKBP14', 'FLNA', 'FLT3LG', 'FN1', 'FOXA1', 'FOXO3', 'FREM2', 'FTSJ1', 'GAB1', 'GAPDH', 'GLE1', 'GRB2', 'GRB7', 'GRHL2', 'HBEGF', 'HGF', 'HGS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPG2', 'IGF1', 'IGF2', 'IL6ST', 'ILK', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'ITPKB', 'JAK1', 'JAK2', 'JUN', 'KDR', 'KITLG', 'KRAS', 'L1CAM', 'LAMA1', 'LAMB1', 'LAMC2', 'LIN7A', 'LIN7B', 'LIN7C', 'LRIG1', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARCH7', 'MDM2', 'MET', 'MITF', 'MMP9', 'MRPL49', 'MTOR', 'MUC1', 'MUC4', 'MYC', 'N4BP1', 'NDRG1', 'NEDD4L', 'NEDD4', 'NF1', 'NGF', 'NICN1', 'NOTCH1', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NTF3', 'NTF4', 'OAT', 'PA2G4', 'PARK7', 'PCSK9', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PGR', 'PI3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIP5K1C', 'PLCG1', 'PLCG2', 'PPP1R9A', 'PRKACA', 'PTEN', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN22', 'PTPN2', 'RASA1', 'RASA2', 'REM1', 'RGS4', 'RHOA', 'RHOC', 'RNF41', 'ROR1', 'RRAS2', 'SH2B3', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SLC25A16', 'SMAD4', 'SNAI2', 'SOS1', 'SOX10', 'SOX2', 'SPARC', 'SPRY2', 'SRC', 'STAT3', 'STAT5A', 'STAT5B', 'SYN3', 'TCF7L2', 'TGFA', 'TMEFF2', 'TNFRSF13C', 'TNS1', 'TP53', 'USP8', 'VAV1', 'VAV2', 'VAV3', 'VEGFA', 'VEGFB', 'VEGFC', 'WNT1', 'WNT5A', 'ZEB1', 'ZNF217', 'KRBOX4', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.7466876386492645 Spearman Correlation: 0.7360795558698706 Coefficient of Determination: 0.5575424297116145 RMSE: 0.3119072751471754 NRMSE: 0.08417482131745108 MAPE: 190.37028687763956 Pearson Correlation: 0.1338431738246005 Spearman Correlation: 0.1755408421551391 Coefficient of Determination: -1.1329661899487853 RMSE: 0.6089704546260404 NRMSE: 0.2946384115974339 MAPE: 380.74737583047323 Predictor: ElasticNet Pearson Correlation: 0.6263425823629537 Spearman Correlation: 0.6105630890091982 Coefficient of Determination: 0.36895129174028163 RMSE: 0.3724955858622706 NRMSE: 0.1005258673966516 MAPE: 197.26970976388046 Pearson Correlation: 0.491961081731852 Spearman Correlation: 0.4622376837616429 Coefficient of Determination: 0.2285540004965817 RMSE: 0.3662326018981801 NRMSE: 0.1771944620281106 MAPE: 202.1750596700287 Predictor: RandomForests Pearson Correlation: 0.543783700878312 Spearman Correlation: 0.5318965825486458 Coefficient of Determination: 0.27033054769490783 RMSE: 0.4005463439783744 NRMSE: 0.10809596190992625 MAPE: 251.16263272132832 Pearson Correlation: 0.5443611277287489 Spearman Correlation: 0.5831419344380854 Coefficient of Determination: 0.24615476712952655 RMSE: 0.36203064429982834 NRMSE: 0.17516142725117975 MAPE: 228.10624964382416
Min-Max
scenario = Scenario.AllInteractionPartners_Mutations
normalizeTechnique = NormalizeTechnique.MinMax
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.266811 | 0.102965 | 0.232299 | 0.000000 | 0.0 | 0.00000 | 0.165596 | 0.256402 | 0.0 | 0.00000 | ... | 0.362558 | 0.154626 | 0.343226 | 0.136973 | 0.283236 | 0.203583 | 0.106969 | 0.050188 | 0.019658 | 0.021305 |
| TCGA-A1-A0SH-01 | 0.074647 | 0.046655 | 0.060467 | 0.000000 | 0.0 | 0.00000 | 0.019946 | 0.108076 | 0.0 | 0.00000 | ... | 0.437102 | 0.171136 | 0.196632 | 0.028737 | 0.498917 | 0.208787 | 0.168174 | 0.119445 | 0.172767 | 0.000000 |
| TCGA-A1-A0SJ-01 | 0.122769 | 0.097168 | 0.035285 | 0.088368 | 0.0 | 0.00000 | 0.020200 | 0.129369 | 0.0 | 0.29443 | ... | 0.415293 | 0.914898 | 0.215818 | 0.074090 | 0.379839 | 0.104565 | 0.110857 | 0.079787 | 0.016343 | 0.000000 |
| TCGA-A1-A0SK-01 | 0.716855 | 1.000000 | 0.116251 | 0.076144 | 0.0 | 0.01449 | 0.000000 | 0.094313 | 0.0 | 0.00000 | ... | 0.334733 | 0.181185 | 0.763246 | 0.229344 | 0.511470 | 0.000000 | 0.246798 | 0.166438 | 0.018601 | 0.000000 |
| TCGA-A1-A0SQ-01 | 0.025757 | 0.011574 | 0.044865 | 0.000000 | 0.0 | 0.00000 | 0.022276 | 0.153652 | 0.0 | 0.00000 | ... | 0.537294 | 0.183640 | 0.239462 | 0.036770 | 0.323545 | 0.099038 | 0.071604 | 0.075950 | 0.006561 | 0.000000 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 Protein Interaction Partners Count: 369 x_train_column_count: 366 x_train columns: ['AATF', 'ABCC1', 'ABL1', 'ACTL6A', 'ACTL6B', 'AFAP1', 'AHR', 'AKT1', 'ANXA5', 'ARID1A', 'ARID1B', 'ARID4A', 'ARMCX1', 'ARMCX2', 'ARMCX3', 'ARNT', 'AR', 'ASF1A', 'ATF2', 'ATM', 'AURKB', 'BCR', 'BDP1', 'BGLAP', 'BRCA1', 'BRF1', 'FAM208A', 'C4BPA', 'CABIN1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CBFB', 'CBX1', 'CBX4', 'CBX5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNT2', 'CDC25A', 'CDC27', 'CDC6', 'CDH1', 'CDK14', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPA', 'CEBPB', 'CEBPD', 'CEBPE', 'CHEK1', 'CHEK2', 'CLNK', 'COL1A1', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUX1', 'DCAF10', 'DGKZ', 'DNAJA3', 'DNMT1', 'DNMT3A', 'DUSP1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EGFR', 'EGF', 'EID1', 'EIF2AK1', 'EIF2AK4', 'AGO2', 'ELF1', 'ENC1', 'EP300', 'ERBB2', 'ESD', 'ESR1', 'ESR2', 'EZH2', 'FBXW7', 'FMO5', 'FOS', 'FOXM1', 'FRK', 'FZR1', 'G6PD', 'GAPDH', 'GATA1', 'GJA1', 'GNB2L1', 'GRB2', 'GSC', 'GTF2H1', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HARS2', 'HARS', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC8', 'HDC', 'HES1', 'HIF1A', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HIST4H4', 'HMGA1', 'HMGA2', 'HRAS', 'HSP90AA1', 'HSPA1A', 'HSPA8', 'ID2', 'IFI16', 'INS', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'KDM2A', 'KDM4A', 'KDM5A', 'KDM5B', 'PPP1R26', 'KIF11', 'KRAS', 'KRT10', 'KRT14', 'KRT5', 'L3MBTL2', 'L3MBTL1', 'LIMD1', 'LIN52', 'LIN54', 'LIN9', 'LMNA', 'LOR', 'LPAR6', 'MAF', 'MAP2K7', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEF2C', 'MORF4L1', 'MRFAP1', 'MRPL11', 'MRPS18B', 'MSH6', 'MTL5', 'MYBL2', 'MYC', 'MYOD1', 'NACC2', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NCR1', 'NDC80', 'NEO1', 'NFYA', 'NFYB', 'NFYC', 'NGF', 'NOTCH1', 'NPM1', 'NRAS', 'ORC1', 'PA2G4', 'PAX2', 'PAX3', 'PAX5', 'PAX6', 'PAX8', 'PCNA', 'PELP1', 'PGR', 'PHB', 'PHF21B', 'PIAS4', 'PIK3CA', 'PIK3R1', 'PIK3R3', 'PLK1', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPIA', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP1R3A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R3B', 'PPRC1', 'PRB1', 'PRB3', 'PRB4', 'PRDM2', 'PRH1', 'PRH2', 'PRIM1', 'PRIM2', 'PRKCB', 'PRMT2', 'PSMA7', 'PSMC1', 'PSMD10', 'PTEN', 'PTGDR', 'RAF1', 'RB1CC1', 'RBAK', 'RBBP4', 'RBBP5', 'RBBP6', 'RBBP7', 'RBBP8', 'RBBP9', 'RBL1', 'RBL2', 'RBFOX2', 'RFC1', 'RPS6KB1', 'RUNX2', 'S100A6', 'SETD1B', 'SETD7', 'SIRT1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMC1A', 'SMC2', 'SMC4', 'SMC5', 'SMYD2', 'SNW1', 'SP100', 'SP1', 'SP3', 'SPI1', 'STAM', 'STAT3', 'SUV39H1', 'SUV420H2', 'SUZ12', 'TAF1', 'TBP', 'TERT', 'TFAP2A', 'TFDP1', 'TFDP3', 'TGM2', 'THAP1', 'TMPO', 'TNS1', 'TOP2A', 'TP53BP1', 'TP53', 'TP73', 'TRDMT1', 'TRIM27', 'TTK', 'UBE2I', 'UBE3A', 'UBL4A', 'UBN1', 'UBR4', 'UBTF', 'UHRF1', 'USP4', 'USP7', 'VEGFA', 'VPS39', 'WDR59', 'WDR73', 'WEE1', 'WWTR1', 'YAP1', 'YY1', 'ZBTB16', 'ZBTB7A', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.823868879960421 Spearman Correlation: 0.730651042724117 Coefficient of Determination: 0.6787599313672386 RMSE: 0.12701659236896776 NRMSE: 0.04810323513310651 MAPE: 315.98409714155065 Pearson Correlation: -0.05427703259829559 Spearman Correlation: -0.06392059311286705 Coefficient of Determination: -115.53290510968438 RMSE: 3.027644612898361 NRMSE: 1.4957018781948497 MAPE: 575.8675751606619 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: RandomForests Pearson Correlation: 0.5790069642120295 Spearman Correlation: 0.41688376525416515 Coefficient of Determination: 0.18390469711120883 RMSE: 0.20244918898417993 NRMSE: 0.07667077787698538 MAPE: 220.53623517082016 Pearson Correlation: 0.2712057000736925 Spearman Correlation: 0.34967362900429494 Coefficient of Determination: 0.0075019447596392785 RMSE: 0.2794122493756406 NRMSE: 0.1380338446597672 MAPE: 117.03651684548917 Protein: CDH1 Protein Interaction Partners Count: 834 x_train_column_count: 826 x_train columns: ['ABCB1', 'ABCG2', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTR3', 'ACVR1B', 'ADAM10', 'ADAM15', 'ADAM17', 'ADAM9', 'AFP', 'AIMP1', 'AJAP1', 'AKAP9', 'AKT1', 'AKT2', 'AKTIP', 'ALB', 'ALCAM', 'ALDH1A1', 'ALDH3A1', 'ALK', 'AMOTL2', 'ANAPC4', 'ANAPC7', 'ANO1', 'ANXA2', 'ANXA5', 'AP1M1', 'AP1M2', 'APC2', 'APC', 'AQP1', 'AQP5', 'AREG', 'ARF6', 'ARHGAP31', 'ARID1A', 'ARL2BP', 'ARMC7', 'ARPC1A', 'ARPC2', 'ARRB2', 'ARVCF', 'AR', 'CLMP', 'ASF1A', 'ATF2', 'ATF3', 'ATM', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BAG3', 'BANP', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL6B', 'BCL9L', 'BCORL1', 'BMI1', 'BMP2', 'BMP4', 'BMP6', 'BMP7', 'BNIP3', 'BRCA1', 'BRCA2', 'BSG', 'BTBD7', 'BTC', 'BTF3', 'ANAPC15', 'CA2', 'CA9', 'CALCA', 'CALR', 'CAPN1', 'CAPNS1', 'CASP3', 'CASP8', 'CASP9', 'CASS4', 'CAV1', 'CBLL1', 'CBL', 'CBX7', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CCR7', 'CD1A', 'CD1B', 'CD1C', 'CD1E', 'CD207', 'CD24', 'CD274', 'CD276', 'CD2AP', 'CD34', 'CD44', 'CD46', 'CD68', 'CD82', 'CDC16', 'CDC23', 'CDC27', 'CDC42', 'CDC6', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH24', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK14', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN3', 'CDX2', 'CEACAM5', 'CFL1', 'CGN', 'CHGA', 'CHL1', 'CLCA2', 'CLDN1', 'CLDN2', 'CLDN3', 'CLDN4', 'CLDN5', 'CLDN7', 'CNTN1', 'COL1A1', 'CORO1C', 'CRB3', 'CREB1', 'CREBBP', 'CRYAB', 'YBX3', 'CSDC2', 'CSE1L', 'CSF2', 'CSNK2A1', 'CSNK2A2', 'CST5', 'CTBP1', 'CTBP2', 'CTCF', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTSL', 'CTTN', 'CXCL12', 'CXCL1', 'CXCR4', 'CYP1B1', 'DAAM1', 'DAB2IP', 'DACH1', 'DAPK1', 'DAP', 'DDR1', 'DDR2', 'DDX3X', 'DICER1', 'DKK1', 'DLC1', 'DLG1', 'DLG5', 'DNM2', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOT1L', 'DPAGT1', 'DPEP1', 'DSP', 'DUOX1', 'DUSP4', 'DVL1', 'DVL2', 'E2F1', 'ECT2', 'EDN1', 'EFEMP1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'EHD1', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'ELAVL1', 'ELF3', 'ENAH', 'ENG', 'EP300', 'EPB41L3', 'EPCAM', 'EPHA10', 'EPHA1', 'EPHA2', 'EPPK1', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ESRP1', 'ESRP2', 'ETS1', 'ETS2', 'EXOC3', 'EXOC4', 'EYA2', 'EZH2', 'EZR', 'F11R', 'F2RL2', 'SUPT20H', 'FBXL5', 'FER', 'FGF10', 'FGF13', 'FGF17', 'FGF19', 'FGF2', 'FGF4', 'FGF5', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FMN1', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC1', 'FOXC2', 'FOXJ2', 'FOXK2', 'FOXL1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXQ1', 'FRMPD2', 'FSCN1', 'FUT4', 'FXYD5', 'FYN', 'FZD1', 'FZD4', 'FZD7', 'FZR1', 'G6PD', 'GAB2', 'GABPA', 'GADD45A', 'GAPDH', 'GAS6', 'GATA1', 'GATA3', 'GATA4', 'GATA6', 'GDNF', 'GFRA1', 'GGT1', 'GJA1', 'GJB1', 'GJB2', 'GKN2', 'GLI1', 'GLI2', 'GMNN', 'GNA12', 'GNA13', 'GNB2L1', 'GNL3', 'GPA33', 'GRB2', 'GRHL2', 'GRHL3', 'GSK3B', 'GSN', 'GSTP1', 'H2AFZ', 'HAVCR2', 'HBEGF', 'HDAC1', 'HDAC2', 'HEPACAM', 'HES1', 'HGF', 'HGS', 'HIF1A', 'HMGA2', 'HNF4A', 'HOXB4', 'HOXD10', 'HPGDS', 'HPGD', 'HRAS', 'HSP90AA1', 'HSPA5', 'ICAM1', 'ID1', 'ID2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP3', 'IL10', 'IL15', 'IL17A', 'IL1B', 'IL24', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IQSEC1', 'IRS1', 'IRS2', 'ITGA5', 'ITGA6', 'ITGAE', 'ITGAM', 'ITGB1', 'ITGB4', 'ITGB7', 'ITPKB', 'IVL', 'JAG1', 'JAK2', 'AJUBA', 'JUN', 'JUP', 'KDM1A', 'KDM6A', 'KDR', 'KEAP1', 'KIFC3', 'KIT', 'KLF4', 'KLF5', 'KLF8', 'KLK3', 'KLK7', 'KLRG1', 'KRAS', 'KRT10', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'KRT9', 'LAMA1', 'LAMB1', 'LAMC2', 'LASP1', 'LATS1', 'LATS2', 'LCN2', 'LEF1', 'LEP', 'LGALS3', 'LGALS4', 'LGALS9', 'LGR5', 'LIF', 'LIMA1', 'LIN28A', 'LIPG', 'LLGL2', 'LMNA', 'LOR', 'LOXL2', 'LOXL3', 'LOX', 'LRP5', 'LRP6', 'LY6K', 'MACC1', 'MACROD1', 'MAD2L2', 'MAGI1', 'MAP2K1', 'MAP2K7', 'MAP4K5', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARK2', 'MARVELD2', 'MCAM', 'MCL1', 'MDM2', 'MED1', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGAT5', 'MGMT', 'MKI67', 'MLH1', 'MLLT4', 'MME', 'MMP11', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP1', 'MMP25', 'MMP27', 'MMP2', 'MMP3', 'MMP7', 'MMP8', 'MMP9', 'MPP5', 'MRAP', 'MSH2', 'MSN', 'MT1G', 'MTA1', 'MTA3', 'MTBP', 'MTDH', 'MTOR', 'MUC1', 'MUC4', 'MYCN', 'MYC', 'MYH6', 'MYO6', 'MYO7A', 'NANOG', 'NCAM1', 'NCOA1', 'NCSTN', 'NDRG1', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEUROG3', 'NF2', 'NFE2L2', 'NFIC', 'NKD2', 'NKX2-1', 'NKX6-1', 'NKX6-2', 'NME1', 'NOG', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NR2F1', 'NRP2', 'NUDT21', 'NUMBL', 'NUMB', 'NUP98', 'NUTF2', 'OTUB1', 'OVOL1', 'OVOL2', 'PARD3', 'PARD6A', 'PAX2', 'PAX5', 'PAX6', 'PAX8', 'PCSK9', 'PDCD4', 'PDGFRB', 'PDPN', 'PEBP1', 'PECAM1', 'PGR', 'PHLPP1', 'PI3', 'PIK3CA', 'PIK3R1', 'PIP5K1A', 'PIP5K1C', 'PIP', 'PIR', 'PITX1', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAUR', 'PLAU', 'PLCD1', 'PLEKHA7', 'PLG', 'PODXL', 'POLR2C', 'POSTN', 'POTEF', 'POU5F1', 'PPARA', 'PPARGC1A', 'PPARG', 'PPL', 'PPP6C', 'PRAME', 'PRDM10', 'PRKAR1A', 'PRKCA', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRKG1', 'PRMT5', 'PROC', 'PROM1', 'PRSS8', 'PSEN1', 'PTCH1', 'PTEN', 'PTF1A', 'PTGS2', 'PTK2', 'PTPN11', 'PTPN14', 'PTPRC', 'PTPRF', 'PTPRJ', 'PTPRM', 'PTPRS', 'PTPRT', 'PTPRU', 'PTRH2', 'PVRL1', 'PVRL2', 'PVR', 'PXN', 'RAB11A', 'RAB25', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RACGAP1', 'RAF1', 'RALA', 'RALBP1', 'RALGDS', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RARB', 'RASSF1', 'RB1', 'RBM4', 'RCOR1', 'RDX', 'REM1', 'RET', 'RHOA', 'RHOB', 'RHOC', 'RHOD', 'RICTOR', 'RND3', 'ROCK1', 'ROCK2', 'RPS6KB1', 'RPTOR', 'RRM2', 'RUNX2', 'RUNX3', 'S100A14', 'S100A4', 'S100A8', 'SATB1', 'SCRIB', 'SDC1', 'SDC4', 'SDHC', 'SELE', 'SELL', 'SELP', 'SEMA3C', 'SEMA3F', 'SENP1', 'SERPINB4', 'SERPINB5', 'SERPINE1', 'SFN', 'SFRP1', 'SFRP2', 'SFTPC', 'SHH', 'SIK1', 'SIN3A', 'SIRT1', 'SIRT2', 'SIRT4', 'SIRT7', 'SIX1', 'SIX2', 'SKIL', 'SKP2', 'SLC2A1', 'SLC39A6', 'SLC6A3', 'SLC9A3R1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SNAI1', 'SNAI2', 'SNAI3', 'SNX16', 'SNX1', 'SOX10', 'SOX17', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPARC', 'SPDEF', 'SPINT1', 'SPP1', 'SPRY1', 'SRCIN1', 'SRC', 'SRXN1', 'ST14', 'ST7L', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STX4', 'STYK1', 'SUCLG2', 'SUMO1', 'SUZ12', 'SYNJ2', 'SYP', 'TACC3', 'TACSTD2', 'TATDN1', 'TBX1', 'TBX3', 'TCF15', 'TCF4', 'TDGF1', 'TERT', 'TET2', 'TFF1', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBI', 'TGFBR1', 'TGFBR2', 'THBS1', 'THEM4', 'THUMPD1', 'THY1', 'TIAM1', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLN1', 'TLR4', 'TMPRSS2', 'TMPRSS4', 'TNFRSF6B', 'TNF', 'TNK2', 'TNS1', 'TP53BP1', 'TP53BP2', 'TP53', 'TRIM21', 'TRIM29', 'TRIM44', 'TRIP10', 'TRPS1', 'TSPYL2', 'TWIST1', 'TWIST2', 'TYRP1', 'T', 'UBE2I', 'UBE2S', 'USP48', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VEZT', 'VHL', 'VIM', 'VIPAS39', 'VPS33B', 'VTN', 'WASL', 'WDFY2', 'WDTC1', 'WIF1', 'WISP1', 'WISP3', 'WNT10A', 'WNT10B', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT9A', 'WNT9B', 'WT1', 'XIAP', 'YAP1', 'YBX1', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 4.946095131471465e-15 NRMSE: 8.313743014256241e-16 MAPE: 4.715796482517128e-12 Pearson Correlation: 0.3268171462040945 Spearman Correlation: 0.3687737781679837 Coefficient of Determination: -2.4188653264548847 RMSE: 2.1454247065458727 NRMSE: 0.3474822173797209 MAPE: 1117.9447006724438 Predictor: ElasticNet Pearson Correlation: 0.6695218322267752 Spearman Correlation: 0.658740135587147 Coefficient of Determination: 0.34910687408951036 RMSE: 0.9103953774969551 NRMSE: 0.15302562948531004 MAPE: 387.3797699142089 Pearson Correlation: 0.6825836091688697 Spearman Correlation: 0.6164666861769584 Coefficient of Determination: 0.3757075492704296 RMSE: 0.9167825162802531 NRMSE: 0.14848604131389542 MAPE: 242.2543107597491 Predictor: RandomForests Pearson Correlation: 0.7559597974811081 Spearman Correlation: 0.7072839403758547 Coefficient of Determination: 0.5645761922122592 RMSE: 0.7446141538285428 NRMSE: 0.12515996063882184 MAPE: 192.1172879405309 Pearson Correlation: 0.7645302684149959 Spearman Correlation: 0.6921577067580342 Coefficient of Determination: 0.5782555357320693 RMSE: 0.7535238037316196 NRMSE: 0.12204395771624173 MAPE: 126.28616103041732 Protein: CDH2 Protein Interaction Partners Count: 472 x_train_column_count: 467 x_train columns: ['ABCG2', 'ABL1', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTR3', 'ADAM10', 'ADH1A', 'AFP', 'AHSG', 'AKT1', 'AKT3', 'ALB', 'ALCAM', 'ALDH1A1', 'AMBN', 'AMELX', 'AMOTL1', 'AMTN', 'ANGPT1', 'ANO8', 'ANXA5', 'APC2', 'APC', 'APLP2', 'APOA1', 'APOA2', 'APOA5', 'APOB', 'APOE', 'APOL1', 'APPL1', 'APP', 'ARHGAP32', 'ARMC7', 'ARPC5', 'ARVCF', 'AR', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BCL2L1', 'BDNF', 'BMI1', 'BMP15', 'BMP2', 'BMP4', 'BMP7', 'BNIP2', 'BOC', 'BPIFB2', 'RGCC', 'GSKIP', 'C3', 'C4A', 'CABLES1', 'CADM1', 'CALU', 'CASP3', 'CAV1', 'CBLL1', 'CCNA2', 'CCNB1', 'CCND1', 'CD24', 'CD34', 'CD44', 'CD80', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK4', 'CDK5', 'CDK6', 'CDKN2A', 'CDON', 'CDX2', 'CEBPZ', 'CFL1', 'CHGB', 'CHL1', 'CHRDL1', 'CKAP4', 'CLDN11', 'CLDN3', 'CLDN4', 'CLDN7', 'CORT', 'CP', 'CREBBP', 'CRP', 'CSF1', 'CSK', 'CST3', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTTN', 'CXCL12', 'CXCR4', 'CYLD', 'CYR61', 'DBN1', 'DDR1', 'DDR2', 'DKK1', 'DLG4', 'DLG5', 'DMP1', 'DNAJC3', 'DSP', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EFNB2', 'EFNB3', 'EGFR', 'EGF', 'EHMT2', 'EIF2AK3', 'ENAM', 'ENG', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA4', 'EPHB2', 'EPS8', 'ERBB2', 'ERBB4', 'ESR1', 'ESRP1', 'EXOC4', 'EZH2', 'EZR', 'F11R', 'F5', 'EVA1A', 'FAM20A', 'FAM20C', 'FBN1', 'FER', 'FGA', 'FGF13', 'FGF23', 'FGF2', 'FGFR1', 'FGFR4', 'FGG', 'FN1', 'FOXC2', 'FOXD3', 'FOXO1', 'FOXP4', 'FSTL1', 'FSTL3', 'FUCA2', 'GAA', 'GAPDH', 'GAS6', 'GATA4', 'GFAP', 'GJA10', 'GJA1', 'GJA3', 'GJB6', 'GJC1', 'GJC3', 'GJD3', 'GJD4', 'GLI1', 'GOLM1', 'GPC3', 'GRIA1', 'GRIA2', 'HGF', 'HMGA2', 'HNF4A', 'HRAS', 'HRC', 'HSP90B1', 'HSPA5', 'IARS2', 'IGF1R', 'IGF1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL1B', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'INVS', 'IQGAP1', 'ISL1', 'ITGA6', 'ITGB1', 'ITIH2', 'ITPKB', 'JAG1', 'JAM3', 'JUN', 'JUP', 'KCNA5', 'KDR', 'KIAA2022', 'KIF5B', 'KIT', 'KLF4', 'KNG1', 'KRAS', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT8', 'KTN1', 'L1CAM', 'LAMB1', 'LAMB2', 'LAMC1', 'LEF1', 'LGALS1', 'LRP5', 'LRP6', 'LRRC7', 'LTBP1', 'LTBP3', 'MAP1B', 'MAP2K6', 'MAP2K7', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MATN3', 'MBTPS1', 'MCAM', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEPE', 'MET', 'MFGE8', 'MFI2', 'MGAT4A', 'MIA3', 'MKI67', 'MLLT4', 'MMP14', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MPDZ', 'MPP5', 'MRAP', 'MRPL49', 'MSLN', 'MSN', 'MTHFD1', 'MUC1', 'MUC4', 'MXRA8', 'MYC', 'MYO10', 'MZF1', 'NANOG', 'NCAM1', 'NCSTN', 'NDRG1', 'NENF', 'NES', 'NFASC', 'NGF', 'NKX2-5', 'NLGN1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTUM', 'NRCAM', 'NT5C', 'NT5E', 'NTRK2', 'NUCB1', 'NUMBL', 'NUMB', 'OLFM3', 'P4HB', 'PARD3', 'PAX6', 'PCSK9', 'PC', 'PDGFRB', 'PDIA4', 'PDIA6', 'PECAM1', 'PENK', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PITX2', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PNPLA2', 'POU5F1', 'PPT2', 'PRKCDBP', 'PRKCSH', 'PROC', 'PROM1', 'PRPH', 'PRSS23', 'PSEN1', 'PTEN', 'PTK2', 'PTPN11', 'PTPN1', 'PTPN2', 'PTPRC', 'PTPRS', 'PVRL1', 'PVRL2', 'PVRL3', 'PXN', 'QSOX1', 'RAB11FIP1', 'RAB3D', 'RAB5A', 'RAC1', 'RCN1', 'RELN', 'REM1', 'RHOA', 'RHOB', 'RHOC', 'ROBO1', 'PTBP3', 'RPS6KB1', 'RUNX2', 'S100A14', 'S100A4', 'SARS2', 'SCARB2', 'SCG2', 'SCG3', 'SDC2', 'SEMA3A', 'SENP3', 'SERPINA10', 'SERPINA1', 'SERPINC1', 'SERPIND1', 'SERPINE1', 'SHH', 'SHISA5', 'SIRT7', 'SKP1', 'SLC2A1', 'SLC9A3R1', 'SLIT1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SNAI1', 'SNAI2', 'SNAI3', 'SOX10', 'SOX18', 'SOX1', 'SOX2', 'SOX4', 'SOX9', 'SP7', 'SPAG9', 'SPARCL1', 'SPARC', 'SPP1', 'SPP2', 'SRC', 'ST6GALNAC5', 'STAT3', 'STC2', 'SYP', 'TBX1', 'TCF3', 'TEK', 'TF', 'TGFB1', 'TGFBR1', 'TGM2', 'TGOLN2', 'THY1', 'TIMP1', 'TJP1', 'TJP3', 'TMEM132A', 'TNC', 'TNF', 'TNNT1', 'TP53', 'TRPS1', 'TSC2', 'TWIST1', 'TWIST2', 'USP9X', 'VANGL2', 'VCAM1', 'VCAN', 'VCL', 'VEGFA', 'VGF', 'VIM', 'VTN', 'VWA1', 'WFS1', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7A', 'XIRP1', 'ZBTB16', 'ZEB1', 'ZEB2', 'ZSCAN1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.945769563385938 Spearman Correlation: 0.924852939002695 Coefficient of Determination: 0.8944800670272276 RMSE: 0.12057818496431941 NRMSE: 0.044545244124882026 MAPE: 2735.574371349777 Pearson Correlation: -0.04153944240682664 Spearman Correlation: -0.00762364647351478 Coefficient of Determination: -4035.154768944649 RMSE: 23.831332462075018 NRMSE: 12.298773010308622 MAPE: 2254.260275089032 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: RandomForests Pearson Correlation: 0.5713874422244214 Spearman Correlation: 0.49981627485692354 Coefficient of Determination: 0.1934604792708685 RMSE: 0.33336063546965655 NRMSE: 0.12315354467324126 MAPE: 881.891873830838 Pearson Correlation: 0.15830246085943883 Spearman Correlation: 0.1951077943615257 Coefficient of Determination: 0.024041650405892456 RMSE: 0.37057836575772324 NRMSE: 0.19124651171890553 MAPE: 105.64700580687712 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.5729780199091093 Spearman Correlation: 0.5407177293306035 Coefficient of Determination: 0.3283038112989639 RMSE: 0.1711261830213943 NRMSE: 0.12005821899126838 MAPE: 542.8036872086927 Pearson Correlation: 0.033830325008297635 Spearman Correlation: 0.3885523363574286 Coefficient of Determination: -2.4388972684261456 RMSE: 0.37937730193698715 NRMSE: 0.29037458721095677 MAPE: 346.6939889104461 Predictor: ElasticNet Pearson Correlation: 0.28483826861421474 Spearman Correlation: 0.3297863641063383 Coefficient of Determination: 0.00012478237763180466 RMSE: 0.2087867449849011 NRMSE: 0.14648000854864815 MAPE: 116.97048735641668 Pearson Correlation: 0.3793141473615411 Spearman Correlation: 0.4487074431762756 Coefficient of Determination: 7.74287154358122e-05 RMSE: 0.20457140523738854 NRMSE: 0.15657852235144662 MAPE: 108.72092392108104 Predictor: RandomForests Pearson Correlation: 0.5488348194628491 Spearman Correlation: 0.5498808348759677 Coefficient of Determination: 0.26165640371302934 RMSE: 0.17941521825494025 NRMSE: 0.12587361666872948 MAPE: 552.0017208748178 Pearson Correlation: 0.4711648997100896 Spearman Correlation: 0.5027704614183982 Coefficient of Determination: 0.20767549842787159 RMSE: 0.1821014003704093 NRMSE: 0.1393800279909142 MAPE: 358.2338803004399 Protein: PTEN Protein Interaction Partners Count: 884 x_train_column_count: 876 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ABTB1', 'ACTB', 'ACTG1', 'ADM', 'AEBP1', 'AFP', 'AKT1S1', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'AMHR2', 'ANXA2', 'ANXA5', 'APAF1', 'APC', 'ARAF', 'AREG', 'ARHGAP21', 'ARID1A', 'ARID2', 'ARL2BP', 'AR', 'ATF3', 'ATG12', 'ATG5', 'ATG7', 'ATM', 'ATRX', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'AXL', 'BAD', 'BAG5', 'BARD1', 'BAX', 'BBC3', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BIRC3', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BNIP3', 'BRAF', 'BRCA1', 'BRCA2', 'BRD4', 'BTG2', 'BTK', 'SPRTN', 'CLHC1', 'CA9', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBL', 'CBX7', 'CCL2', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD24', 'CD274', 'CD34', 'CD44', 'CD79A', 'CD79B', 'CDC14A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC7', 'CDH17', 'CDH1', 'CDH2', 'CDIPT', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CENPC', 'CFL1', 'CFLAR', 'CFTR', 'CHD1', 'CHD8', 'CHEK1', 'CHEK2', 'CHKA', 'CHORDC1', 'CHUK', 'CLTCL1', 'CLTC', 'CNOT6L', 'CREB1', 'CREBBP', 'CRP', 'CSF1R', 'CSF1', 'CSK', 'CSN2', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTGF', 'CTLA4', 'CTNNB1', 'CUL1', 'CUL3', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'DAPK1', 'DAXX', 'DBN1', 'DCAF13', 'DDIT4', 'DDR2', 'DECR1', 'DEPTOR', 'DGCR8', 'DICER1', 'DLC1', 'DLG1', 'DLG4', 'DNM1L', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOLPP1', 'DUSP1', 'DUSP6', 'DUT', 'DVL1', 'DYRK1A', 'E2F1', 'E2F2', 'E2F3', 'ECSCR', 'EGFR', 'EGF', 'EGR1', 'EIF2AK2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4EBP2', 'EIF4E', 'EIF4G1', 'EML4', 'ENDOG', 'EP300', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA3', 'EPHA4', 'EPHA5', 'EPHA7', 'EPHB1', 'EPHB2', 'EPHB3', 'EPHB4', 'ERBB2', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ESR1', 'ETS1', 'ETS2', 'ETV1', 'ETV6', 'EYA2', 'EZH2', 'EZR', 'FABP4', 'FASLG', 'FASN', 'FBXW7', 'FCGR1B', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FIG4', 'FKBP1A', 'FLCN', 'FLT1', 'FLT3', 'FLT4', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXG1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FOXP3', 'FRK', 'FYN', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GCK', 'GDF10', 'GDF2', 'GFAP', 'GJA1', 'GLI1', 'GNA11', 'GNAQ', 'GNAS', 'GNRHR', 'GRASP', 'GRB2', 'GRPR', 'GSK3A', 'GSK3B', 'GSTP1', 'H1F0', 'H2AFX', 'HAVCR2', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HES1', 'HGF', 'HIF1A', 'HIST1H2BA', 'HK1', 'HK2', 'HMGA2', 'HNF4A', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA1A', 'HSPA1B', 'HSPA2', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'ID1', 'ID4', 'IDH1', 'IDH2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL17A', 'IL21', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INPP4A', 'INPP4B', 'INPP5A', 'INPP5B', 'INPP5D', 'INPP5E', 'INPP5F', 'INPP5J', 'INPP5K', 'INPPL1', 'INSRR', 'INSR', 'INS', 'IPMK', 'IPO11', 'IQGAP1', 'IRAK1', 'IRS1', 'IRS2', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'ITPR3', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUN', 'KAT2B', 'KDM5B', 'KDM5C', 'KDM6A', 'KDR', 'KEAP1', 'ATG13', 'KIF11', 'KLLN', 'KITLG', 'KIT', 'KLF17', 'KLF2', 'KLF4', 'KLK3', 'KPNA1', 'KPNA2', 'KPNA5', 'KPNA6', 'KPNA7', 'KRAS', 'KRT14', 'KRT5', 'KRT8', 'LASP1', 'LATS1', 'LATS2', 'LCK', 'LDHA', 'LEF1', 'LEP', 'LGALS3', 'LIG4', 'LOX', 'LRIG1', 'LRP1B', 'LRRK2', 'LYN', 'LYPD1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAN2C1', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K3', 'MAP2K4', 'MAP2K7', 'MAP3K1', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK4', 'MAPK6', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAP1', 'MAPT', 'MARCH2', 'MARCH3', 'MAST1', 'MAST2', 'MAST3', 'MAST4', 'MATK', 'MCL1', 'MCM2', 'MCM7', 'MCRS1', 'MDK', 'MDM2', 'MDM4', 'MECOM', 'MECP2', 'MED12', 'MEN1', 'MET', 'MGMT', 'MINPP1', 'MITF', 'MKI67', 'MKRN1', 'MLH1', 'MLH3', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT1', 'MLST8', 'MME', 'MMP2', 'MMP9', 'MOV10', 'MRAP', 'MRE11A', 'MSH2', 'MSH6', 'MTDH', 'MTMR2', 'MTOR', 'MTSS1', 'MUTYH', 'MVP', 'MYCN', 'MYC', 'MYLK', 'MYOCD', 'NANOG', 'NCKAP1', 'NCOA3', 'NCOR2', 'NDFIP1', 'NDFIP2', 'NDRG1', 'NDRG2', 'NEDD4L', 'NEDD4', 'NES', 'NF1', 'NF2', 'NFATC1', 'NFATC4', 'NFE2L2', 'NFKBIA', 'NGFR', 'NKX3-1', 'NLGN3', 'NLGN4X', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR1H4', 'NR3C2', 'NRAS', 'NRP2', 'NTRK1', 'NTRK2', 'NUMB', 'OCRL', 'OLIG2', 'OTUD3', 'PALB2', 'PARD3', 'PARD6A', 'PARD6B', 'PARD6G', 'PARK2', 'PARK7', 'PARP1', 'PAX8', 'PBK', 'PBRM1', 'PCGF2', 'PCSK9', 'PDCD1', 'PDCD4', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PDK1', 'PDK2', 'PDPK1', 'PDZK1', 'PECAM1', 'PGM3', 'PGR', 'PHF6', 'PHLPP1', 'PHLPP2', 'PI3', 'PI4K2A', 'PI4K2B', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIK3R5', 'PIKFYVE', 'PINK1', 'PIP4K2A', 'PIP4K2B', 'PIP4K2C', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PIP5KL1', 'PKM', 'PLCB1', 'PLCB2', 'PLCB3', 'PLCB4', 'PLCD1', 'PLCD3', 'PLCD4', 'PLCE1', 'PLCG1', 'PLCG2', 'PLCH1', 'PLCH2', 'PLCZ1', 'PLEKHA1', 'PLEK', 'PLK1', 'PLK2', 'PLK3', 'BPIFA1', 'PMAIP1', 'PML', 'PMPCA', 'PMS1', 'PMS2', 'POLE', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPM1D', 'PPP2R1A', 'PPP2R4', 'PPP2R5A', 'PPP2R5E', 'PPP3CA', 'PPP6C', 'PRDX1', 'PREX2', 'PRKAA1', 'PRKAA2', 'PRKCI', 'PRKCZ', 'PRKDC', 'PRMT5', 'PROM1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTER', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPMT1', 'PTPN11', 'PTPN12', 'PTPN13', 'PTPN1', 'PTPRC', 'PTPRD', 'PTS', 'PXN', 'RAB7A', 'RAC1', 'RAC2', 'RAD51C', 'RAD51D', 'RAD51', 'RAD52', 'RAF1', 'RASA1', 'RASSF1', 'RB1CC1', 'RB1', 'RBL1', 'RBL2', 'RBM38', 'RBFOX2', 'RCN1', 'RECK', 'RELA', 'REL', 'REM1', 'RETN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'DROSHA', 'RNF146', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KB1', 'RPS6KB2', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'RRM1', 'RSL1D1', 'RUNX3', 'RWDD3', 'SACM1L', 'SALL4', 'SCAI', 'SCGB1D4', 'SCRIB', 'SDHB', 'SDHC', 'SERPINA1', 'SERPINA4', 'SERPINB5', 'SESN1', 'SESN2', 'SETD2', 'SGK1', 'SGK2', 'SGK3', 'SHANK2', 'SHARPIN', 'SHC1', 'SHFM1', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT5', 'SIRT6', 'SIRT7', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC2A4', 'SLC34A2', 'SLC9A3R1', 'SLC9A3R2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNCA', 'SNX27', 'SOCS1', 'SOCS3', 'SOD2', 'SOS1', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPOP', 'SPRY1', 'SPRY2', 'SRBD1', 'SRC', 'SREBF1', 'SRF', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STMN1', 'STUB1', 'STX16', 'SUCLG2', 'SUMO1', 'SYK', 'SYNJ1', 'SYNJ2', 'TACSTD2', 'TBX1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TEP1', 'TERT', 'TET1', 'TGFB1', 'TGFBR1', 'TGFBR2', 'TGM2', 'THBS1', 'TIMP1', 'TIMP3', 'TJP1', 'TLR4', 'TMEM55A', 'TMEM55B', 'TMPRSS2', 'TNFRSF10B', 'TNFSF10', 'TNF', 'TNKS2', 'TNKS', 'TNPO2', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TPM1', 'TRAF6', 'TRIM27', 'TRIM29', 'TSC1', 'TSC2', 'TTN', 'TUT1', 'TWIST1', 'TWSG1', 'TXN', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2E1', 'UBE2I', 'UBE2L3', 'UBE3A', 'ULK1', 'ULK2', 'USP10', 'USP13', 'USP18', 'USP28', 'USP7', 'USP8', 'UTF1', 'UVRAG', 'VCL', 'VDR', 'VEGFA', 'VHL', 'WDR18', 'WDTC1', 'WEE1', 'WIPI1', 'WIPI2', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT9A', 'WNT9B', 'WT1', 'WWP1', 'WWP2', 'XIAP', 'XPO1', 'XPO5', 'YAP1', 'YES1', 'YWHAB', 'YWHAZ', 'YY1', 'ZEB1', 'ZEB2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 3.0065312765206518e-15 NRMSE: 4.701010517583695e-16 MAPE: 6.2927472669612935e-12 Pearson Correlation: 0.12915136630183408 Spearman Correlation: 0.14246414983904013 Coefficient of Determination: -4.083453595741952 RMSE: 1.1198095313415286 NRMSE: 0.3690625309279311 MAPE: 792.1647878594616 Predictor: ElasticNet Pearson Correlation: 0.44407960655750217 Spearman Correlation: 0.43897880951000845 Coefficient of Determination: 0.08177657934816362 RMSE: 0.600312408121817 NRMSE: 0.09386481246529856 MAPE: 375.0239737771879 Pearson Correlation: 0.24436951818258051 Spearman Correlation: 0.2931567651936397 Coefficient of Determination: 0.04192952775983416 RMSE: 0.4861423496087321 NRMSE: 0.16022093125328984 MAPE: 155.30647787846638 Predictor: RandomForests Pearson Correlation: 0.5983317064201549 Spearman Correlation: 0.5566130776311595 Coefficient of Determination: 0.31039299635334594 RMSE: 0.5202402729896276 NRMSE: 0.08134473817365766 MAPE: 343.05542700563353 Pearson Correlation: 0.3129213352792975 Spearman Correlation: 0.32680873480407685 Coefficient of Determination: 0.0853305514619388 RMSE: 0.4750035053447232 NRMSE: 0.15654983367764919 MAPE: 188.1204497344643 Protein: BRCA2 Protein Interaction Partners Count: 361 x_train_column_count: 351 x_train columns: ['ABL1', 'ACHE', 'ADRB1', 'ADRB2', 'AKT1', 'ALK', 'APEX1', 'ARID1A', 'ARPC1A', 'AR', 'ATAD5', 'ATM', 'ATRIP', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'B3GALTL', 'BACH1', 'BARD1', 'BCCIP', 'BCHE', 'BDNF', 'BECN1', 'BIRC5', 'BLM', 'BMI1', 'BRCA1', 'BRCC3', 'BRE', 'BRIP1', 'SLX4', 'BUB1B', 'BUB1', 'BUB3', 'SFR1', 'RHNO1', 'RMI2', 'BABAM1', 'MMS22L', 'CASC1', 'CASC5', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCNE1', 'CDC25A', 'CDC25C', 'CDC45', 'CDC6', 'CDH1', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CENPE', 'CENPF', 'CEP55', 'CHEK1', 'CHEK2', 'CHRNA1', 'CLSPN', 'CNTROB', 'CREM', 'CSMD3', 'CTNNB1', 'CYP19A1', 'DMC1', 'DNA2', 'DSN1', 'DYNC1LI2', 'EGFR', 'EGF', 'ELAC2', 'EME1', 'EME2', 'ENAM', 'EPCAM', 'ERBB2', 'ERBB3', 'ERCC1', 'ERCC2', 'ERCC4', 'ERCC5', 'ERCC6', 'ERCC8', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM175A', 'FANCA', 'FANCB', 'FANCC', 'FANCD2', 'FANCE', 'FANCF', 'FANCG', 'FANCI', 'FANCL', 'FANCM', 'FBN1', 'FBXO18', 'FBXW7', 'FEN1', 'FGFR2', 'FHIT', 'FLNA', 'FOXM1', 'GAPDH', 'GEN1', 'SLX1B', 'H2AFX', 'HELQ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HMG20A', 'HMG20B', 'HMMR', 'HNRNPC', 'HOXB13', 'HRAS', 'HUS1', 'ITPKB', 'KAT2B', 'KAT5', 'KEAP1', 'SPIDR', 'KIF23', 'KIF4A', 'KIT', 'KLK3', 'KRAS', 'KRT5', 'LIG1', 'LIG3', 'LIG4', 'LIMD1', 'LSP1', 'MAD2L2', 'MAGED1', 'MAMSTR', 'MAP2K2', 'MAP3K1', 'MCM10', 'MCPH1', 'MDC1', 'MDM2', 'MDM4', 'MEN1', 'MGMT', 'MKI67', 'MLH1', 'MLH3', 'KMT2C', 'MND1', 'MORF4L1', 'MRE11A', 'MRPL36', 'MSH2', 'MSH3', 'MSH4', 'MSH5', 'MSH6', 'MTA2', 'FAN1', 'MUC1', 'MUS81', 'MUTYH', 'MYC', 'NBN', 'NCAPG', 'NEDD4', 'NF1', 'NHEJ1', 'NNT', 'NOTCH1', 'NSL1', 'NSMCE4A', 'OBFC1', 'OGG1', 'PALB2', 'PARG', 'PARP1', 'PARP2', 'PARP3', 'PAXIP1', 'PCNA', 'PDLIM7', 'PDS5A', 'PDS5B', 'PGR', 'PIK3CA', 'PLCB4', 'PLEC', 'PLEKHH1', 'PLK1', 'PMS1', 'PMS2', 'PNOC', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'POLN', 'POLQ', 'PRDM9', 'PRKDC', 'PRSS1', 'PSMC3IP', 'PSMD3', 'PSMD6', 'PTEN', 'RAD17', 'RAD18', 'RAD1', 'RAD21', 'RAD23B', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD52', 'RAD54B', 'RAD54L', 'RAD9A', 'RAD9B', 'RAG2', 'RASSF1', 'RBBP8', 'RBMX', 'RECQL4', 'RECQL5', 'RECQL', 'RET', 'REV1', 'REV3L', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RNF168', 'RNF8', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SKP2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCAL1', 'SMARCB1', 'SMC1A', 'SMC2', 'SMC3', 'SMC4', 'SMC5', 'SMC6', 'SMUG1', 'SNAI2', 'SP1', 'SPO11', 'STAT5A', 'STK11', 'STRA13', 'SUV39H1', 'SYCP3', 'TBCE', 'TDP1', 'TERT', 'TEX15', 'TMPRSS2', 'TNS1', 'TOP1', 'TOP2A', 'TOP3A', 'TOP3B', 'TOPBP1', 'TOX3', 'TP53BP1', 'TP53', 'TPX2', 'TRIP12', 'PRSS58', 'TTK', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2D1', 'UBE2E2', 'UBE2E3', 'UBE2N', 'UBE2T', 'UIMC1', 'USF1', 'USP11', 'USP15', 'USP1', 'USP21', 'USP4', 'UVRAG', 'VEGFA', 'VWF', 'WDR48', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WTIP', 'XPA', 'XPO1', 'XRCC1', 'XRCC2', 'XRCC3', 'XRCC4', 'XRCC5', 'XRCC6', 'ZFYVE26', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.845401047935339 Spearman Correlation: 0.8120135223720151 Coefficient of Determination: 0.7147029318501693 RMSE: 0.10555049364409866 NRMSE: 0.06827946492185492 MAPE: 270.53743966754746 Pearson Correlation: 0.02096534826319999 Spearman Correlation: 0.04804902942281085 Coefficient of Determination: -4.00712938587051 RMSE: 0.41337366813902493 NRMSE: 0.41370463184450057 MAPE: 640.1565431607848 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: RandomForests Pearson Correlation: 0.6038379109924537 Spearman Correlation: 0.5287903895757671 Coefficient of Determination: 0.19632982286801204 RMSE: 0.1771538278513725 NRMSE: 0.11459888207947193 MAPE: 155.57895599225836 Pearson Correlation: 0.3217212603847228 Spearman Correlation: 0.3267977841161635 Coefficient of Determination: 0.07343552924222985 RMSE: 0.1778223000237307 NRMSE: 0.17796467176113964 MAPE: 126.72210717188743 Protein: CDKN2A Protein Interaction Partners Count: 612 x_train_column_count: 605 x_train columns: ['ABCC1', 'ABL1', 'ACAP1', 'ACAP2', 'ACP5', 'ACTA1', 'ACTB', 'ACTG1', 'ADAMTS9', 'ADAP1', 'AFP', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD12', 'ANXA5', 'AP3D1', 'AP3S1', 'AP3S2', 'APAF1', 'APBA1', 'APBA2', 'ARAP1', 'ARAP2', 'ARF1', 'ARF3', 'ARF4', 'ARF5', 'ARF6', 'ARFGAP1', 'ARFGAP3', 'ARFIP2', 'ARFRP1', 'ARID1A', 'ARID2', 'ARID5B', 'ARL10', 'ARL1', 'ARL2', 'ARL3', 'ARL4A', 'ARL5A', 'AR', 'ASAP1', 'ATM', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'AXIN1', 'BAP1', 'BCL2L11', 'BCL2L1', 'BCL6', 'BECN1', 'BIRC5', 'BMI1', 'BRAF', 'BRCA1', 'BRCA2', 'BUB1B', 'RGCC', 'C1QBP', 'RABL6', 'CACNA1G', 'CADM1', 'CAMK1D', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNL1', 'CD274', 'CD34', 'CD44', 'CDC123', 'CDC20', 'CDC25A', 'CDC25C', 'CDC42', 'CDC45', 'CDC5L', 'CDC6', 'CDC7', 'CDH13', 'CDH17', 'CDH1', 'CDH2', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5RAP3', 'CDK6', 'CDK7', 'CDKAL1', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDX2', 'CEACAM5', 'CEBPB', 'CEBPE', 'CHEK1', 'CHEK2', 'CHFR', 'CHKA', 'COMMD1', 'CRABP1', 'CREBBP', 'CSF1R', 'CSF1', 'CSF2', 'CTBP1', 'CTBP2', 'CTCF', 'CTLA4', 'CTNNB1', 'CTSK', 'CUL1', 'CUL3', 'CXCR4', 'CYCS', 'CYLD', 'CYTH1', 'CYTH2', 'CYTH3', 'DAB2IP', 'DAP', 'DAXX', 'DICER1', 'DIRAS3', 'DLEC1', 'DMTF1', 'DNAH3', 'DNMT1', 'DNMT3A', 'DNMT3B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EBF1', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EP300', 'EPCAM', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ETS1', 'ETV6', 'EWSR1', 'EZH1', 'EZH2', 'FAT1', 'FBXW7', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FKBP2', 'FLT3', 'FMN2', 'FN1', 'FOS', 'FOXA1', 'FOXM1', 'FOXN2', 'FOXO1', 'FOXO3', 'FTO', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GATA4', 'GATA5', 'GBF1', 'GDF15', 'GGA1', 'GGA2', 'GGA3', 'GIT1', 'GIT2', 'GLI1', 'GLTSCR2', 'GMNN', 'GNA11', 'GNAQ', 'GNAS', 'GNL3', 'GOLPH3', 'GP5', 'GSPT1', 'GSTP1', 'H2AFX', 'H2AFZ', 'H3F3A', 'H3F3B', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC9', 'HELLS', 'HGF', 'HHEX', 'HIC1', 'HIF1A', 'HIST1H2BA', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AA3', 'HIST2H2AC', 'HIST2H4A', 'HIST4H4', 'HLTF', 'HMGA2', 'HNF4A', 'HNRNPD', 'HOPX', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA4', 'HSPA9', 'HUWE1', 'ID1', 'IDH1', 'IDH2', 'IGF1R', 'IGF1', 'IGF2BP2', 'IGF2R', 'IGF2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING4', 'INS', 'IQSEC1', 'IRS1', 'ISOC2', 'ITGAM', 'JAK1', 'JAK2', 'JAK3', 'JAZF1', 'JUNB', 'JUN', 'KAT2B', 'KAT5', 'KCNJ11', 'KCNQ1', 'KDM1A', 'KDM2B', 'KDM6A', 'KDM6B', 'KDR', 'KEAP1', 'KIAA1549', 'KIT', 'KLF4', 'KRAS', 'KRT19', 'KRT20', 'KRT5', 'KRT7', 'LATS2', 'LOX', 'LRRK2', 'MACROD2', 'MAF', 'MAP2K1', 'MAP2K4', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MAX', 'MC1R', 'MCL1', 'MCM10', 'MCM2', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEN1', 'MEOX1', 'MEOX2', 'MET', 'MGMT', 'MITF', 'MKRN1', 'MLANA', 'MLH1', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT3', 'MME', 'MMP2', 'MMP7', 'MMP9', 'MOV10', 'MRAS', 'MSH2', 'MSH6', 'MTA1', 'MTAP', 'MTHFR', 'MTNR1B', 'MTOR', 'MUC1', 'MYBL2', 'MYCL', 'MYCN', 'MYC', 'MYOD1', 'KAT6A', 'NANOG', 'NCAM1', 'NCL', 'NCOR1', 'NES', 'NEUROG1', 'NF1', 'NF2', 'NFATC1', 'NFE2L2', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NPM1', 'NRAS', 'NSUN2', 'ORC4', 'ORC5', 'OSBP2', 'P2RY8', 'PA2G4', 'PALB2', 'PARP1', 'PAX3', 'PAX5', 'PAX8', 'PBRM1', 'PCGF2', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PEX19', 'PGR', 'PHLDB1', 'PI3', 'PIAS2', 'PIGF', 'PIK3CA', 'PIK3R1', 'PIP4K2A', 'PLEKHA3', 'PLEKHA8', 'PLEK', 'PLK1', 'PMAIP1', 'PML', 'PMS2', 'POTEF', 'POU5F1', 'PPARA', 'PPARG', 'PPM1D', 'PPP1R9B', 'PPP3CA', 'PRDM2', 'PRMT6', 'PROM1', 'PRSS1', 'PSMC3', 'PSMD10', 'PSME3', 'PTCH1', 'PTEN', 'PTER', 'PTF1A', 'PTGS2', 'PTPN11', 'PTPRC', 'PTPRD', 'PXN', 'RAB11A', 'RAB5A', 'RABEP1', 'RABGEF1', 'RAC2', 'RAD51', 'RAF1', 'RAP2B', 'RARB', 'RASSF1', 'RASSF2', 'RB1', 'RBL1', 'RBL2', 'RCC1', 'RELA', 'RELB', 'REL', 'RET', 'RHOA', 'DROSHA', 'RNF2', 'RNF43', 'ROS1', 'RPL11', 'RPRM', 'RPS27A', 'RPS6KB1', 'RRAS2', 'RRAS', 'RTEL1', 'RUNX2', 'RUNX3', 'SDHC', 'SENP1', 'SENP3', 'SERPINE1', 'SERTAD1', 'SETD2', 'SFN', 'SFRP1', 'SFRP2', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SIX2', 'SKP2', 'SLC30A8', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SNAI1', 'SNAI2', 'SNCA', 'SOCS1', 'SOX2', 'SP1', 'SPEN', 'SRC', 'STAT1', 'STAT3', 'STK11', 'STK25', 'STK33', 'STMN1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUV39H1', 'SUZ12', 'SYNE1', 'SYP', 'TBL1XR1', 'TBRG1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TERT', 'TET2', 'TFDP1', 'TFPI2', 'TGFBR2', 'THADA', 'THBS1', 'TIMP3', 'TMCO1', 'TMEM115', 'TNFRSF10B', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TRADD', 'TRIM28', 'TRIP12', 'PRSS58', 'TSC2', 'TSPAN8', 'TTF1', 'TWIST1', 'TWSG1', 'TYR', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2I', 'UBE3A', 'UCHL1', 'USP7', 'UTF1', 'VEGFA', 'VHL', 'WDTC1', 'WEE1', 'WFS1', 'WHSC1', 'WIF1', 'WRN', 'WT1', 'WWOX', 'XRCC1', 'YY1', 'ZBTB17', 'ZBTB7A', 'ZEB1', 'ZFP91', 'ZNF148', 'ZNF217', 'ZNF227', 'ZNF410', 'ZNF420', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 4.96106910269884e-15 NRMSE: 1.1215257381482625e-15 MAPE: 4.1653914872217114e-12 Pearson Correlation: 0.07503339549299931 Spearman Correlation: 0.0035606282313920597 Coefficient of Determination: -8.775909714472913 RMSE: 2.3351815062530545 NRMSE: 0.6306188242649351 MAPE: 1318.7414522214128 Predictor: ElasticNet Pearson Correlation: 0.4695592459072097 Spearman Correlation: 0.34748426567225144 Coefficient of Determination: 0.12330668701023006 RMSE: 0.6017860348114995 NRMSE: 0.13604296028292062 MAPE: 175.8927700297641 Pearson Correlation: 0.575553615386346 Spearman Correlation: 0.36956394498097755 Coefficient of Determination: 0.14018049391406617 RMSE: 0.6925413325474532 NRMSE: 0.1870216939096552 MAPE: 440.58608438779225 Predictor: RandomForests Pearson Correlation: 0.6607511781830171 Spearman Correlation: 0.6039855415911017 Coefficient of Determination: 0.42435018378000744 RMSE: 0.4876378899475922 NRMSE: 0.1102380219164897 MAPE: 179.7477011975791 Pearson Correlation: 0.7092247029117462 Spearman Correlation: 0.5793828864710735 Coefficient of Determination: 0.4563914662849009 RMSE: 0.5506620972013854 NRMSE: 0.14870702057828392 MAPE: 286.0885966516016 Protein: TP53 Protein Interaction Partners Count: 1000 x_train_column_count: 991 x_train columns: ['ABCB1', 'ABCC1', 'ABL1', 'ACTB', 'ACTL6A', 'ADAM17', 'AFP', 'AGT', 'AICDA', 'AIFM2', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD2', 'ANXA1', 'ANXA2', 'ANXA5', 'APAF1', 'APBB1', 'APC', 'APEX1', 'APOBEC3B', 'APP', 'ARID1A', 'ARID3A', 'AR', 'ASF1A', 'ASXL1', 'ATF2', 'ATF3', 'ATG7', 'ATM', 'ATN1', 'ATRIP', 'ATRX', 'ATR', 'ATXN3', 'AURKA', 'AURKB', 'AXIN1', 'AXL', 'BACE1', 'BAG1', 'BAG2', 'BAIAP2L1', 'BAK1', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2A1', 'BCL2L11', 'BCL2L12', 'BCL2L14', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BID', 'BIRC3', 'BIRC5', 'BIRC6', 'BLM', 'BMF', 'BMI1', 'BMX', 'BNIP3L', 'BNIP3', 'BRCA1', 'BRCA2', 'BRCC3', 'BRD1', 'BRD4', 'BRD7', 'BRE', 'BRIP1', 'BRPF1', 'BRPF3', 'BTG2', 'BTK', 'BUB1B', 'BUB1', 'RHNO1', 'RGCC', 'RMI2', 'CNOT11', 'SETD9', 'CA9', 'CABIN1', 'CABLES1', 'CAPN1', 'CARM1', 'CASP10', 'CASP1', 'CASP2', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBX2', 'CBX4', 'CBX6', 'CBX8', 'CCDC106', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNG2', 'CCNH', 'CCNK', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CD24', 'CD274', 'CD34', 'CD40LG', 'CD40', 'CD44', 'CD82', 'CDC20', 'CDC25A', 'CDC25C', 'CDH17', 'CDH1', 'CDK12', 'CDK13', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CEACAM5', 'CEBPB', 'CENPJ', 'CFL1', 'CFLAR', 'CHD3', 'CHD4', 'CHD8', 'CHEK1', 'CHEK2', 'CHUK', 'CISH', 'CITED2', 'CLSPN', 'CLU', 'CNOT10', 'CNOT1', 'CNOT2', 'CNOT3', 'CNOT4', 'CNOT6L', 'CNOT6', 'CNOT7', 'CNOT8', 'COPS5', 'CREB1', 'CREBBP', 'CRYAB', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK1G1', 'CSNK1G2', 'CSNK1G3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTCF', 'CTGF', 'CTNNB1', 'CUL4A', 'CUL7', 'CUL9', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP1A1', 'DACH1', 'DAPK1', 'DAP', 'DAXX', 'DDB1', 'DDB2', 'DDIT4', 'DDX17', 'DDX3X', 'DDX5', 'DECR1', 'DGCR8', 'DHCR24', 'DHFR', 'DIABLO', 'DICER1', 'DKK1', 'DMTF1', 'DNA2', 'DNAJA3', 'DNAJB1', 'DNMT1', 'DNMT3A', 'DNTT', 'DPYD', 'DRAM1', 'DTL', 'DUSP1', 'DUSP2', 'DYRK1A', 'DYRK2', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EEF1A1', 'EEF1A2', 'EGFR', 'EGF', 'EGR1', 'EHMT1', 'EHMT2', 'EI24', 'EIF2AK2', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4EBP1', 'ELANE', 'ELAVL1', 'ELL3', 'ELL', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHA3', 'EPHB2', 'ERBB2', 'ERBB4', 'ERCC1', 'ERCC2', 'ERCC3', 'ERCC6', 'ESR1', 'ETS1', 'ETS2', 'EWSR1', 'EXO1', 'EZH2', 'F2', 'FADD', 'AMER1', 'FAM175B', 'FANCC', 'FANCD2', 'FASLG', 'FAS', 'FBL', 'FBXO11', 'FBXO4', 'FBXW7', 'FGF1', 'FGF2', 'FGFR3', 'FHIT', 'FHL2', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FSCN1', 'FUT4', 'FZR1', 'G3BP1', 'G6PD', 'GADD45A', 'GADD45B', 'GADD45G', 'GAPDH', 'GATAD2A', 'GATAD2B', 'GDF15', 'GFI1', 'GLS2', 'GLTSCR2', 'GNL3', 'GRAMD4', 'GRB10', 'GRB14', 'GSK3B', 'GSTP1', 'GTF2H1', 'GTSE1', 'H1F0', 'H2AFX', 'HAMP', 'HCK', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC5', 'HDAC7', 'HDAC8', 'HDAC9', 'HERC5', 'HIC1', 'HIF1A', 'HIPK1', 'HIPK2', 'HIPK3', 'HIPK4', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HK2', 'HMGA1', 'HMGA2', 'HMGB1', 'HMGB2', 'HMMR', 'HMOX1', 'HNF4A', 'HNRNPK', 'HNRNPL', 'HOXA5', 'HPGDS', 'HRAS', 'HSF1', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA1A', 'HSPA1B', 'HSPA1L', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'HSPB1', 'HSPB2', 'HTT', 'HUS1', 'HUWE1', 'ICAM1', 'ID2', 'ID4', 'IDH1', 'IDH2', 'IFI16', 'IFNAR1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IGFBP7', 'IKBKB', 'IL17A', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING2', 'ING3', 'ING4', 'ING5', 'INSIG1', 'INS', 'IRF1', 'ISG15', 'ITPKB', 'JAG1', 'JAK2', 'JMY', 'JUN', 'KAT2A', 'KAT2B', 'KAT5', 'KDM1A', 'KDM6A', 'KDM6B', 'KDR', 'KHDRBS1', 'CCAR2', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KPNA2', 'KRAS', 'KRT14', 'KRT17', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'L3MBTL1', 'LAMA4', 'LEP', 'LGALS7B', 'LGALS7', 'LIF', 'LIG4', 'LIN28A', 'PIDD1', 'LRRK2', 'LYN', 'MAF1', 'MAF', 'MAGEA2', 'MAP1LC3B', 'MAP2K1', 'MAP2K3', 'MAP2K7', 'MAP3K1', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MBD3', 'MCL1', 'MCM7', 'MDC1', 'MDH1', 'MDM2', 'MDM4', 'MEAF6', 'MECOM', 'MELK', 'MET', 'MGMT', 'MIF', 'MKI67', 'MKRN1', 'MLH1', 'KMT2D', 'KMT2C', 'MMP13', 'MMP1', 'MMP2', 'MMP9', 'MOV10', 'MRE11A', 'MSH2', 'MSH6', 'MSX1', 'MT1A', 'MT2A', 'MTA1', 'MTA2', 'MTA3', 'MTOR', 'MUC1', 'MUTYH', 'MYBBP1A', 'MYB', 'MYCN', 'MYC', 'MYOCD', 'KAT8', 'KAT6A', 'NANOG', 'NBN', 'NCL', 'NCOA3', 'NCOR1', 'NCOR2', 'NDN', 'NDRG1', 'NEDD8', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFE2L2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NFKBIB', 'NFYA', 'NFYB', 'NFYC', 'NGFR', 'NKX2-1', 'NLK', 'NLRC4', 'NME1', 'NOC2L', 'NOS3', 'NOTCH1', 'NOTCH3', 'NOTCH4', 'NOX4', 'NPM1', 'NQO1', 'NR1I2', 'NR2E1', 'NR3C1', 'NR4A1', 'NR4A2', 'NRAS', 'NUAK1', 'NUMB', 'NUPR1', 'OGG1', 'OLIG2', 'OPN1SW', 'OSGIN1', 'OTUB1', 'OTUB2', 'OTUD5', 'PADI4', 'PALB2', 'PARK2', 'PARK7', 'PARP1', 'PATZ1', 'PAX2', 'PAX3', 'PAX8', 'PBK', 'PBRM1', 'PCBP4', 'PCNA', 'PDCD4', 'PDCD5', 'PDGFRA', 'PDGFRB', 'PDLIM7', 'PER2', 'PERP', 'PGR', 'PHB', 'PHC1', 'PHC2', 'PHC3', 'PHF20', 'PHGDH', 'PI3', 'PIAS1', 'PIAS2', 'PIAS4', 'PIK3CA', 'PIN1', 'PKM', 'PLAGL1', 'PLAU', 'PLK1', 'PLK2', 'PLK3', 'PLK4', 'PMAIP1', 'PML', 'PMS2', 'POLI', 'POLK', 'POU4F1', 'POU4F2', 'POU5F1', 'PPARGC1A', 'PPARG', 'PPIF', 'PPM1D', 'PPP1R13B', 'PPP1R13L', 'PPP1R15A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R4', 'PPP2R5C', 'PRDM1', 'PRDM2', 'PRDX1', 'PRELID1', 'PRIMA1', 'PRKAA1', 'PRKAA2', 'PRKAB1', 'PRKAB2', 'PRKAG1', 'PRKAG2', 'PRKAG3', 'PRKCA', 'PRKCD', 'PRKCZ', 'PRKD1', 'PRKDC', 'PRKG1', 'PRMT1', 'PRMT5', 'PROM1', 'PSEN1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTBP1', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2', 'PTTG1', 'RABGGTA', 'RABGGTB', 'RAD17', 'RAD1', 'RAD50', 'RAD51', 'RAD9A', 'RAD9B', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP4', 'RBBP6', 'RBBP7', 'RBBP8', 'RBL1', 'RBL2', 'RBM38', 'RBPJ', 'RCHY1', 'RCOR1', 'RECQL4', 'RELA', 'REM1', 'REST', 'RET', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RFFL', 'RFWD2', 'RING1', 'RMI1', 'DROSHA', 'RNF20', 'RNF2', 'RNF34', 'RNF43', 'ROCK1', 'RPA1', 'RPA2', 'RPA3', 'RPL11', 'RPL22', 'RPL26', 'RPL5', 'RPRM', 'RPS14', 'RPS19', 'RPS27A', 'RPS27L', 'RPS3', 'RPS6KB1', 'RQCD1', 'RRAD', 'RRM2B', 'RRM2', 'RUNX2', 'RUNX3', 'S100A2', 'S100A4', 'S100A6', 'S100B', 'SALL4', 'SCO2', 'SDHC', 'SENP1', 'SENP3', 'SERPINB5', 'SERPINE1', 'SESN1', 'SESN2', 'SESN3', 'SETD2', 'SETD7', 'SETD8', 'SETDB1', 'SFN', 'SRSF1', 'SGK1', 'SHFM1', 'SHH', 'SHISA5', 'SIK1', 'SIN3A', 'SIN3B', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SKP2', 'SLC2A14', 'SLC2A1', 'SLC2A2', 'SLC2A3', 'SLC6A6', 'SLMO1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMG1', 'SMG7', 'SMYD2', 'SNAI1', 'SNAI2', 'SOCS1', 'SOCS3', 'SOD2', 'SORT1', 'SOX2', 'SOX4', 'SP100', 'SP1', 'SP3', 'SP7', 'SPATA18', 'SPP1', 'SQSTM1', 'SRC', 'SREBF1', 'SREBF2', 'SSRP1', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STEAP3', 'STK11', 'STMN1', 'STUB1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUMO4', 'SUPT16H', 'SUV39H1', 'SUZ12', 'SYK', 'SYP', 'TADA3', 'TAF10', 'TAF11', 'TAF12', 'TAF13', 'TAF15', 'TAF1L', 'TAF1', 'TAF2', 'TAF3', 'TAF4B', 'TAF4', 'TAF5', 'TAF6', 'TAF7L', 'TAF7', 'TAF9B', 'TBPL1', 'TBPL2', 'TBP', 'TCHP', 'TCP1', 'TDG', 'TERT', 'TET2', 'TFAM', 'TFAP2A', 'TFAP2C', 'TFDP1', 'TFF1', 'TGFB1', 'TGM2', 'THBS1', 'TIMP3', 'TLR3', 'TLR9', 'TMEM219', 'TNFAIP3', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF10C', 'TNFRSF10D', 'TNF', 'TNK2', 'TNKS1BP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOE1', 'TOP1', 'TOP2A', 'TOP3A', 'TOPBP1', 'TOPORS', 'TP53AIP1', 'TP53BP1', 'TP53BP2', 'TP53I3', 'TP53INP1', 'TP53RK', 'TP63', 'TP73', 'TPT1', 'TPX2', 'TRAF6', 'TRIAP1', 'TRIM24', 'TRIM28', 'TRIM29', 'TRIM32', 'TRIM59', 'TRIM8', 'TRRAP', 'TSC2', 'TTC5', 'TTK', 'TWIST1', 'TWIST2', 'TXN', 'TYMS', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2D1', 'UBE2E1', 'UBE2I', 'UBE2K', 'UBE2N', 'UBE2Q1', 'UBE2S', 'UBE3A', 'UBN1', 'UCHL1', 'UHRF1', 'USF1', 'USP10', 'USP15', 'USP24', 'USP3', 'USP42', 'USP7', 'UTP14A', 'VEGFA', 'VHL', 'VPRBP', 'VRK1', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WWOX', 'XAF1', 'XIAP', 'XPA', 'XPO1', 'XRCC1', 'XRCC5', 'XRCC6', 'YBX1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'YY1', 'YY2', 'ZBTB33', 'ZBTB7A', 'ZEB1', 'ZEB2', 'ZKSCAN4', 'ZNF148', 'ZNF274', 'ZNF385A', 'ZNF420', 'ZNF668', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.2660305689523657e-15 NRMSE: 5.445879761961947e-16 MAPE: 6.578524001355412e-12 Pearson Correlation: 0.36581100757556306 Spearman Correlation: 0.35705297044190815 Coefficient of Determination: -0.9398769890947947 RMSE: 0.5858617892954945 NRMSE: 0.2106734471917345 MAPE: 966.1527483152187 Predictor: ElasticNet Pearson Correlation: 0.44027133179599404 Spearman Correlation: 0.4102592685389911 Coefficient of Determination: 0.1504842486927036 RMSE: 0.4173600791292189 NRMSE: 0.10030283084095624 MAPE: 558.4932458731847 Pearson Correlation: 0.5129287044334645 Spearman Correlation: 0.4664813188957175 Coefficient of Determination: 0.19779249568213664 RMSE: 0.3767484186358647 NRMSE: 0.1354771543873799 MAPE: 565.9239895055072 Predictor: RandomForests Pearson Correlation: 0.6578300600149463 Spearman Correlation: 0.5691549846269923 Coefficient of Determination: 0.37486668057814176 RMSE: 0.3580234818259469 NRMSE: 0.08604265364718744 MAPE: 564.486580249894 Pearson Correlation: 0.49991780325241103 Spearman Correlation: 0.5225089443287664 Coefficient of Determination: 0.24724954793540155 RMSE: 0.36495018692417036 NRMSE: 0.13123455964765737 MAPE: 355.9936133058641 Protein: CTNNB1 Protein Interaction Partners Count: 992 x_train_column_count: 984 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACAN', 'ACP1', 'ACTA1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTN4', 'ACVR1B', 'ACVR1', 'ADAM10', 'ADCY7', 'ADIPOQ', 'AES', 'AFP', 'AHI1', 'AHR', 'AHSA1', 'AJAP1', 'AK9', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'ALPL', 'AMHR2', 'AMH', 'ANXA5', 'AP1M1', 'APC2', 'APCS', 'APC', 'APH1A', 'APH1B', 'AQP1', 'ARHGAP10', 'ARHGAP21', 'ARHGAP32', 'ARHGEF4', 'ARID1A', 'ARID2', 'ARMC7', 'ARMC8', 'ARVCF', 'ARX', 'AR', 'ASCL1', 'ASF1A', 'ASH2L', 'ASIP', 'ATF4', 'ATM', 'AURKA', 'AXIN1', 'AXIN2', 'BAG3', 'BCAR1', 'BCL2L1', 'BCL3', 'BCL6', 'BCL9L', 'BCL9', 'BDNF', 'BGLAP', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BMPR1B', 'BNIP2', 'BRAF', 'BRCA1', 'BRCA2', 'BRMS1L', 'BTRC', 'HILPDA', 'AK8', 'CA2', 'CA9', 'CABLES1', 'CACYBP', 'CALM1', 'CALM3', 'CARM1', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBLL1', 'CBL', 'CBY1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CD24', 'CD34', 'CD40', 'CD44', 'CDC27', 'CDC42', 'CDC73', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH16', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH26', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDHR5', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK8', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDON', 'CDX1', 'CDX2', 'CEBPA', 'CHD8', 'CHRD', 'CHUK', 'CITED1', 'CKAP5', 'CLCA1', 'CLDN3', 'CLDN5', 'COL1A1', 'COPS3', 'COPS5', 'COPS6', 'CREB1', 'CREBBP', 'CRKL', 'CRK', 'CRP', 'CRYAB', 'CSNK1A1L', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK2A3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNAL1', 'CTNNBIP1', 'CTNND1', 'CTNND2', 'CTTN', 'CUL1', 'CUL4A', 'CUL4B', 'CXCR4', 'CXXC4', 'DAB2', 'DACT1', 'DACT2', 'DACT3', 'DCT', 'DCX', 'DDB1', 'DDX39A', 'DDX3X', 'DDX5', 'DHODH', 'DHX9', 'DKK1', 'DKK2', 'DKK3', 'DKK4', 'DLG1', 'DLG2', 'DLG4', 'DLG5', 'DLGAP1', 'DLL4', 'DLX1', 'DNM2', 'DNMT1', 'DPYD', 'DSC1', 'DSC2', 'DSC3', 'DSG1', 'DSG2', 'DSG3', 'DSG4', 'DSP', 'DUSP6', 'DVL1', 'DVL2', 'DVL3', 'E2F3', 'ECM1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'ELAVL1', 'EMD', 'ENAH', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHB2', 'EPHB3', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EXOC3', 'EXOC4', 'EYA4', 'EZH2', 'EZR', 'F2RL2', 'FAF1', 'AMER1', 'FANCA', 'FASLG', 'FAS', 'FAT1', 'FAT4', 'FBXW11', 'FBXW7', 'FERMT2', 'FER', 'FGF10', 'FGF13', 'FGF2', 'FGF3', 'FGF4', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FLT3', 'FMN1', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC2', 'FOXG1', 'FOXL1', 'FOXL2', 'FOXM1', 'FOXN3', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FRAT1', 'FRAT2', 'FRZB', 'FSCN1', 'FSTL1', 'FSTL3', 'FURIN', 'FUS', 'FXR1', 'FYN', 'FZD10', 'FZD1', 'FZD2', 'FZD3', 'FZD4', 'FZD5', 'FZD6', 'FZD7', 'FZD8', 'FZD9', 'GAPDH', 'GATA2', 'GATA4', 'GCG', 'GDF2', 'GDNF', 'GFRA1', 'GJA1', 'GLI1', 'GLI2', 'GLI3', 'GLIS2', 'GLUL', 'GNA11', 'GNA12', 'GNA13', 'GNAQ', 'GNAS', 'GPC3', 'GRIA2', 'GRIP1', 'GSK3A', 'GSK3B', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HAS2', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC7', 'HERC5', 'HES7', 'HGF', 'HGS', 'HHEX', 'HIC1', 'HIF1A', 'HINT1', 'HIPK2', 'HIST1H1C', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HMGB1', 'HNF1A', 'HNF4A', 'HNRNPA1', 'HNRNPA2B1', 'HNRNPK', 'HNRNPM', 'HOXA10', 'HOXB4', 'HPGD', 'HRAS', 'HSP90AB1', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPD1', 'HTRA1', 'HTT', 'HUWE1', 'IBSP', 'IDH1', 'IDH2', 'IFNB1', 'IFRD1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP4', 'IHH', 'IKBKB', 'IL6', 'CXCL8', 'ILK', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IRF3', 'ISG15', 'ISL1', 'ITGAE', 'ITGB1', 'ITGB7', 'ITK', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'AJUBA', 'JUN', 'JUP', 'KANK1', 'KAT2A', 'KAT2B', 'KAT5', 'KCNN1', 'KCTD1', 'KDM1A', 'KDR', 'KIF18B', 'KIF3A', 'KIF5B', 'KIFC3', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KRAS', 'KREMEN1', 'KRIT1', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LATS2', 'LDB1', 'LDHB', 'LDLR', 'LEF1', 'LEO1', 'LGR4', 'LGR5', 'LGR6', 'LHCGR', 'LHX8', 'LIF', 'LIMA1', 'LMNA', 'LMNB1', 'LOX', 'LRP4', 'LRP5L', 'LRP5', 'LRP6', 'LRRFIP1', 'LRRK2', 'LZTFL1', 'MACF1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8IP1', 'MAPK8', 'MAPK9', 'MDFIC', 'MDFI', 'MDK', 'MDM2', 'MED12', 'MED1', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'KMT2D', 'MLLT10', 'MLLT11', 'MLLT4', 'MLLT6', 'KMT2A', 'MME', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP25', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MRAP', 'MSH2', 'MSH6', 'MSN', 'MSX1', 'MSX2', 'MTDH', 'MTOR', 'MUC13', 'MUC1', 'MUTYH', 'MYCN', 'MYC', 'MYF5', 'MYO1D', 'MYO6', 'MYO7A', 'MYOD1', 'MYOG', 'NANOG', 'NCAM1', 'NCCRP1', 'NCOA2', 'NCSTN', 'NDP', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEURL2', 'NF1', 'NF2', 'NFAT5', 'NFKB1', 'NIT1', 'NKD1', 'NKX2-5', 'NLK', 'NME1', 'NOG', 'NONO', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR0B1', 'NR4A1', 'NR4A2', 'NR5A1', 'NR5A2', 'NRAS', 'NRIP1', 'NTRK1', 'NTRK2', 'NTRK3', 'NUDT5', 'NUMB', 'NUP153', 'NUTF2', 'OTX2', 'PAK1', 'PAK2', 'PAK3', 'PANK4', 'PARD3', 'PARD6A', 'PARK2', 'PARP1', 'PAX3', 'PAX6', 'PAX7', 'PAX8', 'PDGFRA', 'PDGFRB', 'PECAM1', 'PGK1', 'PGR', 'PHB', 'JADE1', 'PI3', 'PICK1', 'PIK3CA', 'PIK3R1', 'PIK3R2', 'PIN1', 'PIP5K1A', 'PIP5K1C', 'PITX2', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAG1', 'PLEKHA7', 'PLK1', 'PML', 'PMS2', 'POLE', 'PORCN', 'POTEF', 'POU5F1', 'PPARD', 'PPARG', 'PPM1A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R2B', 'PPP2R5A', 'PPP2R5B', 'PPP2R5C', 'PPP2R5D', 'PPP2R5E', 'PRKACA', 'PRKACB', 'PRKACG', 'PRKAR1A', 'PRKCA', 'PRKCG', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRL', 'PRMT1', 'PROC', 'PROM1', 'PROP1', 'PSEN1', 'PSEN2', 'PSENEN', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTEN', 'PTGES3', 'PTGS2', 'PTH1R', 'PTH', 'PTK2', 'PTK7', 'PTMA', 'PTN', 'PTPN11', 'PTPN13', 'PTPN1', 'PTPN6', 'PTPRB', 'PTPRC', 'PTPRF', 'PTPRG', 'PTPRJ', 'PTPRK', 'PTPRM', 'PTPRU', 'PTPRZ1', 'PVRL1', 'PVRL2', 'PXN', 'PYGO1', 'PYGO2', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RALGDS', 'RANBP3', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RAPGEF2', 'RAPGEF6', 'RAPSN', 'RARA', 'RARB', 'RARG', 'RARS', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP5', 'RBMX', 'RBPJ', 'RBX1', 'RELA', 'REM1', 'RET', 'RHOA', 'RIPK2', 'RNF220', 'RNF43', 'ROBO1', 'ROCK1', 'ROCK2', 'ROR2', 'RPRD1A', 'RPS27A', 'RPSA', 'RSPO1', 'RSPO2', 'RSPO3', 'RSPO4', 'RUNX2', 'RUNX3', 'RUVBL1', 'RUVBL2', 'RXRA', 'RYK', 'S100A4', 'S100A6', 'SALL1', 'SALL4', 'SATB1', 'SCRIB', 'SDHC', 'SERPINE1', 'SETD2', 'SETD7', 'SFN', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHFM1', 'SHH', 'SIAH1', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT6', 'SKP1', 'SLC6A3', 'SLC9A3R1', 'SLCO1B3', 'SLCO2A1', 'SLIT1', 'SLK', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD5', 'SMAD7', 'SMAD9', 'SMARCA2', 'SMARCA4', 'SMARCA5', 'SMARCB1', 'SMO', 'SMURF1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNX1', 'SOST', 'SOX10', 'SOX13', 'SOX17', 'SOX1', 'SOX2', 'SOX3', 'SOX4', 'SOX6', 'SOX7', 'SOX8', 'SOX9', 'SP1', 'SP7', 'SPAG9', 'SPATA13', 'SPEN', 'SPN', 'SPP1', 'SRC', 'STAT3', 'STK11', 'STRAP', 'STX4', 'SUFU', 'SUV39H1', 'SYP', 'TADA3', 'TAX1BP3', 'TAZ', 'TBL1XR1', 'TBL1X', 'TBX5', 'TBX6', 'TCF12', 'TCF3', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TFAP2A', 'TFCP2', 'TFF1', 'TFF2', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBR1', 'TGFBR2', 'TGM2', 'TJP1', 'TJP2', 'TLE1', 'TLE2', 'TLE3', 'TLE4', 'TNFRSF11B', 'TNFSF11', 'TNF', 'TNIK', 'TNKS2', 'TNKS', 'TNS1', 'TOB1', 'TOP2A', 'TP53', 'TRAF4', 'TRIM33', 'TRIM37', 'TRIP10', 'TRRAP', 'TSC2', 'TUBA1A', 'TWIST1', 'TYMS', 'T', 'UBA52', 'UBB', 'UBC', 'UBE2B', 'UBE2R2', 'UBE3A', 'UBR5', 'UCHL1', 'UMPS', 'UPRT', 'USP4', 'USP7', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VAV2', 'VAV3', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VHL', 'VIM', 'WDR64', 'WDTC1', 'WHSC1', 'WIF1', 'WISP1', 'WLS', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'WWTR1', 'XPO1', 'YAP1', 'YARS', 'YEATS4', 'YES1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'ZAP70', 'ZAR1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZIC3', 'ZNRF3', 'ZYX', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 3.1301046805268207e-15 NRMSE: 6.308532721701878e-16 MAPE: 5.050551125217453e-12 Pearson Correlation: 0.27006838310468323 Spearman Correlation: 0.3127987513413326 Coefficient of Determination: -1.7060924753746218 RMSE: 1.2353409282382286 NRMSE: 0.3064905791292187 MAPE: 757.9503537441678 Predictor: ElasticNet Pearson Correlation: 0.5410205877759615 Spearman Correlation: 0.5240265333686468 Coefficient of Determination: 0.15024133595335754 RMSE: 0.6796007406836034 NRMSE: 0.1369693332292568 MAPE: 680.1914540686062 Pearson Correlation: 0.48350051208617106 Spearman Correlation: 0.4458930836015999 Coefficient of Determination: 0.12281253316255836 RMSE: 0.7033341784741801 NRMSE: 0.1744986300982931 MAPE: 306.83419027378693 Predictor: RandomForests Pearson Correlation: 0.6841986264785491 Spearman Correlation: 0.6820702465624745 Coefficient of Determination: 0.45392154713139776 RMSE: 0.544795564573407 NRMSE: 0.1098001823111851 MAPE: 366.845194298559 Pearson Correlation: 0.5488929367708912 Spearman Correlation: 0.48712320749195204 Coefficient of Determination: 0.29198761781243854 RMSE: 0.6318819358306932 NRMSE: 0.156771184397036 MAPE: 224.60700344906942 Protein: CCNE1 Protein Interaction Partners Count: 350 x_train_column_count: 347 x_train columns: ['ABL1', 'AKT1', 'AKT2', 'AKT3', 'ALDH18A1', 'ANAPC10', 'ANAPC13', 'ANAPC1', 'ANAPC2', 'ANAPC4', 'ANAPC5', 'ANAPC7', 'ANXA5', 'ARID1A', 'AR', 'ATM', 'AURKA', 'AURKB', 'BARD1', 'BCL2L1', 'BIRC5', 'BRCA1', 'BRCA2', 'BTG2', 'BTRC', 'BUB1B', 'BUB1', 'BUB3', 'RGCC', 'MLIP', 'CABLES1', 'CALM1', 'CAPRIN1', 'CASP3', 'CASP9', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNF', 'CCNG1', 'CCNH', 'CCNK', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CDC16', 'CDC20', 'CDC23', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC26', 'CDC27', 'CDC45', 'CDC6', 'CDC7', 'CDCA2', 'CDCA5', 'CDCA8', 'CDH1', 'CDK12', 'CDK13', 'CDK14', 'CDK15', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CENPA', 'CENPE', 'CHAF1A', 'CHD1L', 'CHEK1', 'CHEK2', 'CINP', 'CKS1B', 'CKS2', 'COPS5', 'CREBBP', 'CSK', 'CTNNB1', 'CUL1', 'CUL3', 'CUL4B', 'DBF4B', 'DBF4', 'DGCR8', 'DICER1', 'DTL', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'EBNA1BP2', 'ECT2', 'EGFR', 'EGF', 'ELAVL1', 'ELSPBP1', 'EP400', 'ERBB2', 'ERBB3', 'ERBB4', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM58A', 'FAM83H', 'FBXO5', 'FBXW7', 'FEN1', 'FGFR1', 'FGFR2', 'FGFR3', 'FOXM1', 'FZR1', 'GAPDH', 'GLI1', 'GMNN', 'GSK3B', 'H1F0', 'HDAC1', 'HEATR3', 'HERC5', 'HIST1H1A', 'HIST1H1B', 'HIST1H4A', 'HRAS', 'IFNAR1', 'IGF1R', 'IGF1', 'ITPKB', 'JUN', 'KIF11', 'KIF20A', 'KIF23', 'KIF2C', 'KPNA2', 'KRAS', 'LATS2', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'GMNC', 'MAD2L1', 'MAPK3', 'MATK', 'MAX', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDM2', 'MEGF11', 'MELK', 'MKI67', 'KMT2D', 'KMT2B', 'MNAT1', 'MRE11A', 'MTOR', 'MYBL2', 'MYC', 'NBN', 'NF1', 'NFYB', 'NMI', 'NOTCH1', 'NOTCH3', 'NPAT', 'NRAS', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PARK2', 'PARP1', 'PCBP4', 'PCNA', 'PIK3CA', 'PIK3R1', 'PKMYT1', 'PLK1', 'PLK4', 'POLA1', 'POLD1', 'PPP1R1C', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R4', 'PRC1', 'PRKAR1A', 'PRKAR2A', 'PRMT5', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB10', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSMF1', 'PTEN', 'PTGDR', 'PTK6', 'PTTG1', 'RAD51', 'RAD54L', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RBX1', 'REL', 'REM1', 'RHOA', 'RHOBTB3', 'RINT1', 'RNASE1', 'RPRD1A', 'RPS27A', 'RRM1', 'RRM2', 'RRN3', 'RSF1', 'SHFM1', 'SKP1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'ST8SIA1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STK3', 'STK4', 'TARBP1', 'TCP1', 'TERF1', 'TERT', 'TFDP1', 'TK1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TPX2', 'TTK', 'TUBG1', 'TYMS', 'UBA52', 'UBB', 'UBC', 'UBE2C', 'UBE2QL1', 'UBE2S', 'UHRF2', 'WEE1', 'WEE2', 'XIAP', 'YAP1', 'ZNF217', 'ZNF33A', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.9600859906029509 Spearman Correlation: 0.8662267544166397 Coefficient of Determination: 0.9217651093520491 RMSE: 0.13528524503270578 NRMSE: 0.03264841688170132 MAPE: 30.40559507270769 Pearson Correlation: 0.4255931918984427 Spearman Correlation: 0.324212271973466 Coefficient of Determination: -1.0744584893826357 RMSE: 0.7734976956786467 NRMSE: 0.2755112005979151 MAPE: 96.35319060126271 Predictor: ElasticNet Pearson Correlation: 0.6515032788007329 Spearman Correlation: 0.5961934500590594 Coefficient of Determination: 0.3396660402060936 RMSE: 0.3930357084261414 NRMSE: 0.09485139088885329 MAPE: 84.53223065620593 Pearson Correlation: 0.7215858978618659 Spearman Correlation: 0.566491074041557 Coefficient of Determination: 0.36581630296943346 RMSE: 0.42767531754003474 NRMSE: 0.15233314961354755 MAPE: 63.59809459232877 Predictor: RandomForests Pearson Correlation: 0.8596874273082401 Spearman Correlation: 0.7210960464713698 Coefficient of Determination: 0.7320514696254783 RMSE: 0.2503663064140619 NRMSE: 0.060420953836923974 MAPE: 54.40166636566519 Pearson Correlation: 0.845046857639206 Spearman Correlation: 0.7078185738575904 Coefficient of Determination: 0.7100918169730611 RMSE: 0.28915911496185553 NRMSE: 0.10299523239959235 MAPE: 44.09579052171135 Protein: CCND1 Protein Interaction Partners Count: 857 x_train_column_count: 849 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTL6B', 'AFP', 'AHR', 'AKAP12', 'AKAP8', 'AKR1B10', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDOA', 'ALK', 'ANO1', 'ANXA5', 'APAF1', 'APC', 'APEX1', 'AREG', 'ARHGEF2', 'ARID1A', 'ARID1B', 'ARID2', 'ARID4A', 'AR', 'ASIP', 'ATF2', 'ATF3', 'ATF4', 'ATM', 'ATXN1', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'B2M', 'BANP', 'BARX2', 'BAX', 'BCAR1', 'BCAR3', 'BCCIP', 'BCL2A1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL3', 'BCL6', 'BCL9', 'BECN1', 'BGLAP', 'BHLHE40', 'BIRC2', 'BIRC3', 'BIRC5', 'BMI1', 'BMP4', 'BMP6', 'BRAF', 'BRCA1', 'BRCA2', 'BRD2', 'BRD4', 'BTC', 'BTG2', 'BTRC', 'RGCC', 'COPRS', 'CA9', 'CARD11', 'CARM1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBFB', 'CCDC62', 'CCL2', 'CCL5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNC', 'CCND2', 'CCND3', 'CCNDBP1', 'CCNE1', 'CCNE2', 'CCNG2', 'CCNH', 'CCNK', 'CCNL1', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CD19', 'CD22', 'CD24', 'CD34', 'CD38', 'CD44', 'CD5', 'CD79A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC6', 'CDC73', 'CDCA7L', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK12', 'CDK13', 'CDK14', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK20', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CDX2', 'CENPE', 'CEP57', 'CFLAR', 'CHEK1', 'CHEK2', 'CHKA', 'CHUK', 'CKS1B', 'CKS2', 'CLCN3', 'COL1A1', 'CR2', 'CREB1', 'CREBBP', 'CRKL', 'CRYAB', 'CSF2', 'CTBP1', 'CTGF', 'CTNNB1', 'CTNND1', 'CTTN', 'CUL1', 'CUL3', 'CUL7', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'CYR61', 'DACH1', 'DAXX', 'DDIT3', 'DDX53', 'DECR1', 'DHFR', 'DICER1', 'DKK1', 'DKK3', 'DLL1', 'DMTF1', 'DND1', 'DNMT1', 'DNMT3A', 'DNTT', 'DVL1', 'DVL2', 'DYRK1A', 'DYRK1B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EDN1', 'EEF1A1', 'EGFR', 'EGF', 'EGLN2', 'EGR1', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF3I', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4E', 'EIF4G1', 'ELAVL1', 'ELSPBP1', 'EP300', 'EPCAM', 'EPHA2', 'EPHA7', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EWSR1', 'EYA1', 'EZH2', 'FABP4', 'FADD', 'FAM58A', 'FAM83H', 'FASLG', 'FAT1', 'FBXO31', 'FBXO4', 'FBXW7', 'FBXW8', 'FGF13', 'FGF19', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FHL2', 'FIGF', 'FLCN', 'FLNA', 'FLT1', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXC1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FRZB', 'FSTL3', 'FZD1', 'FZD2', 'FZD7', 'FZD9', 'FZR1', 'GADD45A', 'GAL', 'GAPDH', 'GAST', 'GATA3', 'GATA4', 'GDF15', 'GDF2', 'GGNBP2', 'GGT1', 'GIT1', 'GJA1', 'GJB1', 'GLI1', 'GLI2', 'GLI3', 'GLTSCR2', 'GNB2L1', 'GPER1', 'GRB2', 'GREB1', 'GRM4', 'GRP', 'GSK3B', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HBEGF', 'HBZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC4', 'HEXIM1', 'HEY1', 'HGF', 'HIF1A', 'HIST1H2AA', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AH', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AC', 'HIST2H2BE', 'HIST2H4A', 'HIST4H4', 'HMGA2', 'HMOX1', 'HNF1A', 'HNF4A', 'HNRNPD', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB8', 'ICAM1', 'ID1', 'ID2', 'IFNAR1', 'IFNB1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP3', 'IGFBP5', 'IHH', 'IKBKB', 'IL10', 'IL17A', 'IL2', 'IL4', 'IL6', 'IL7', 'CXCL8', 'ILK', 'INSM1', 'INS', 'IRF1', 'IRS1', 'ISG15', 'ITGB1', 'ITPKB', 'ITPKC', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUNB', 'JUND', 'JUN', 'KAT2A', 'KAT2B', 'KDM1A', 'KDM5B', 'KDR', 'KHDRBS1', 'KIF18B', 'KIN', 'KITLG', 'KIT', 'KLF13', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KRAS', 'KRT10', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LDB3', 'LEF1', 'LEP', 'LGALS3', 'LGR5', 'LIMK2', 'LIMS1', 'LIN28B', 'LMNA', 'LMNB1', 'LOX', 'LRP5', 'LRP6', 'LYN', 'MAFB', 'MAF', 'MAML1', 'MAML2', 'MAML3', 'MAMLD1', 'MAP2K1', 'MAP2K2', 'MAP2K4', 'MAP2K7', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDK', 'MDM2', 'MDM4', 'MEN1', 'MET', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'MLXIPL', 'MME', 'MMP11', 'MMP14', 'MMP15', 'MMP1', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MNAT1', 'MOV10', 'MSH2', 'MST1', 'MTOR', 'MUC1', 'MYBL2', 'MYB', 'MYCN', 'MYC', 'MYEOV', 'MYF5', 'MYOD1', 'MYOG', 'NACA2', 'NADSYN1', 'NANOG', 'NCAM1', 'NCOA1', 'NCOA3', 'NCOR1', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NGF', 'NKX2-1', 'NME1-NME2', 'NME1', 'NME2', 'NMI', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NQO1', 'NR0B2', 'NR1H3', 'NR2E1', 'NR3C1', 'NR4A3', 'NRAS', 'NRF1', 'NUDT21', 'ODC1', 'ORAI1', 'ORAOV1', 'ORC4', 'PAK1', 'PAK4', 'PARK2', 'PARP1', 'PAX2', 'PAX5', 'PAX6', 'PBRM1', 'PBX3', 'PCNA', 'PDCD4', 'PDGFRA', 'PDGFRB', 'PDZK1', 'PECAM1', 'PELP1', 'PGR', 'PI3', 'PI4K2A', 'PIK3CA', 'PIK3R1', 'PKLR', 'PKM', 'PLAUR', 'PLAU', 'PLK1', 'PMAIP1', 'POLR2A', 'POTEF', 'POU2F1', 'POU5F1', 'PPARG', 'PPP2R4', 'PRDM5', 'PRKACA', 'PRL', 'PRMT5', 'PRNP', 'PROM1', 'PSAT1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTCHD3', 'PTEN', 'PTF1A', 'PTGS2', 'PTHLH', 'PTH', 'PTK2', 'PTK6', 'PTPN11', 'PTPRCAP', 'PTPRC', 'PXN', 'RAD51', 'RAF1', 'RALA', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RBX1', 'RCC1', 'RELA', 'RELB', 'REL', 'REM1', 'RET', 'RHEB', 'RHOA', 'RHOC', 'RICTOR', 'RNASE1', 'DROSHA', 'RND3', 'RNMT', 'ROCK1', 'RPRD1B', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KA6', 'RPS6KB1', 'RPS6', 'RPTOR', 'RREB1', 'RSF1', 'RUNX1', 'RUNX2', 'RUNX3', 'SDC1', 'SDHC', 'SENP1', 'SERPINE1', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHC1', 'SHFM1', 'SHH', 'SIRT1', 'SIX1', 'SIX3', 'SKP1', 'SKP2', 'SLC25A16', 'SLC25A6', 'SLC2A1', 'SLC35B2', 'SLC39A4', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMO', 'SNAI1', 'SNAI2', 'SNCA', 'SNIP1', 'SNW1', 'SNX33', 'SOCS3', 'SOX11', 'SOX17', 'SOX2', 'SOX4', 'SOX6', 'SOX9', 'SP1', 'SPN', 'SPP1', 'SPRY1', 'SRC', 'SREBF1', 'STAT1', 'STAT3', 'STAT4', 'STAT5A', 'STAT5B', 'STAT6', 'STC2', 'STIM1', 'STK11', 'STK24', 'STMN1', 'SUFU', 'SULF2', 'SUV39H1', 'TAF1', 'TBP', 'TBX2', 'TCEAL7', 'TCF4', 'TCF7L2', 'TCF7', 'TERT', 'TET3', 'TFDP1', 'TFF1', 'TGFA', 'TGFB1', 'TGFBR2', 'THBS1', 'THRA', 'THRB', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLR9', 'TM4SF1', 'TMPRSS4', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF8', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP2A', 'TP53', 'TP63', 'TP73', 'TRPV2', 'TSC22D3', 'TSC2', 'TWIST1', 'TXN', 'TYMS', 'UBA52', 'UBA7', 'UBB', 'UBC', 'UBE2C', 'UBTF', 'URGCP', 'USP18', 'USP2', 'USP9X', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VIP', 'VRK1', 'WDR77', 'WDTC1', 'WEE1', 'WHSC1', 'WIF1', 'WISP1', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'XBP1', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YY1', 'ZBTB17', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.079240857533481e-15 NRMSE: 6.48808393270179e-16 MAPE: 2.7446031913308467e-12 Pearson Correlation: 0.09103142808364666 Spearman Correlation: 0.12131011608623551 Coefficient of Determination: -2.294251128768497 RMSE: 0.4264310768504004 NRMSE: 0.3037085328830269 MAPE: 1737.3974095397457 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: RandomForests Pearson Correlation: 0.5704725542385461 Spearman Correlation: 0.5547056754820439 Coefficient of Determination: 0.26297215871093493 RMSE: 0.20509128252867684 NRMSE: 0.12329494807605827 MAPE: 325.7250287173021 Pearson Correlation: 0.49912157464398055 Spearman Correlation: 0.46262315871622284 Coefficient of Determination: 0.22531475351959973 RMSE: 0.20679171639625385 NRMSE: 0.1472791553161172 MAPE: 1074.6486839065683 Protein: ERBB2 Protein Interaction Partners Count: 663 x_train_column_count: 657 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACPP', 'ACTA2', 'ACTB', 'ACTG1', 'ADAM10', 'ADAM17', 'ADRB2', 'AFP', 'AGRN', 'AKT1S1', 'AKT1', 'AKT2', 'ALB', 'ALDH1A1', 'ALK', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'ANO1', 'ANXA2', 'ANXA5', 'AP2B1', 'APP', 'AREG', 'ARHGEF11', 'ARHGEF12', 'ARID1A', 'ARL6IP5', 'AR', 'ATM', 'ATP2B2', 'AURKB', 'AXIN1', 'BAG1', 'BARD1', 'BCAR1', 'BCAR3', 'BCAS1', 'BCL2L11', 'BCL2L1', 'BDNF', 'BECN1', 'BEST1', 'BIRC5', 'BLNK', 'BMI1', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BSG', 'BTC', 'MIEN1', 'CA9', 'CALU', 'CARTPT', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAV1', 'CBLB', 'CBLC', 'CBL', 'CCL27', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD19', 'CD22', 'CD247', 'CD24', 'CD274', 'CD28', 'CD33', 'CD34', 'CD44', 'CD46', 'CD52', 'CD68', 'CD6', 'CD80', 'CD82', 'CDC37', 'CDC42', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK4', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CEACAM5', 'CEP70', 'CHEK2', 'CHGA', 'CHKA', 'CHKB', 'CISH', 'CLDN3', 'CLDN4', 'CLDN7', 'CLTC', 'CNN1', 'COPS5', 'CPNE3', 'CREB1', 'CRKL', 'CRK', 'YBX3', 'CSF1', 'CSF2', 'CSF3', 'CSK', 'CSPG4', 'CTAG1B', 'CTLA4', 'CTNNB1', 'CTNND1', 'CTSB', 'CTSD', 'CTTN', 'CUL5', 'CXCL12', 'CXCR1', 'CXCR4', 'CYCS', 'CYP19A1', 'CYTIP', 'DCN', 'DDX41', 'DDX53', 'DHH', 'DIAPH1', 'DICER1', 'DLG4', 'DMTF1', 'DNAJA3', 'DNM2', 'DNMT1', 'DOCK1', 'DOCK7', 'DUSP6', 'E2F1', 'E2F3', 'EEA1', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EGFR', 'EGF', 'EIF3A', 'EIF4EBP1', 'EIF4E', 'ELAVL1', 'ELF3', 'EML4', 'ENO2', 'EP300', 'EPCAM', 'EPGN', 'EPHA2', 'EPS15', 'EPX', 'ERAL1', 'ERBB2IP', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ERRFI1', 'ESCO1', 'ESR1', 'ESR2', 'ESRRB', 'ETS1', 'ETS2', 'ETV4', 'ETV6', 'EZH2', 'EZR', 'FASLG', 'FASN', 'FBXW7', 'FCGR1A', 'FCGR1B', 'FCGRT', 'FGF10', 'FGF13', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FIGF', 'FLT1', 'FLT3LG', 'FN1', 'FOLH1', 'FOLR1', 'FOS', 'FOXA1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXP3', 'FREM2', 'FSIP1', 'FYN', 'GAB1', 'GABPB1', 'GAPDH', 'GATA3', 'GATA4', 'GDF2', 'GLI1', 'GLI2', 'GLS', 'GNA11', 'GNAQ', 'GNAS', 'GNRH1', 'GPER1', 'GRAP2', 'GRB2', 'GRB7', 'GSTP1', 'GZMB', 'H2AFX', 'H2AFY', 'HBEGF', 'HDAC1', 'HDAC6', 'HEATR6', 'HGF', 'HIF1A', 'HK1', 'HLA-A', 'HMGA2', 'HNF4A', 'HOXB7', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPG2', 'ICAM1', 'ID1', 'IDH1', 'IDH2', 'IFNG', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IHH', 'IL10', 'IL2', 'IL4', 'IL6R', 'IL6ST', 'IL6', 'CXCL8', 'ILK', 'INPP4B', 'INS', 'IQGAP1', 'IQSEC1', 'IRS1', 'ITGA5', 'ITGA6', 'ITGAV', 'ITGB1', 'ITGB3', 'ITGB4', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JUN', 'JUP', 'KDR', 'KITLG', 'KLK3', 'KLRK1', 'KRAS', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'L1CAM', 'LAMP1', 'LCN2', 'LDHA', 'LEP', 'LIN28A', 'LIN7A', 'LIN7B', 'LIN7C', 'LINGO1', 'LOX', 'LRIG1', 'LRPPRC', 'MAGEA1', 'MAGEA3', 'MAGED4B', 'MAGED4', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK8', 'MATK', 'MCL1', 'MDK', 'MDM2', 'MEMO1', 'MET', 'MGMT', 'MKI67', 'MLANA', 'MLH1', 'KMT2C', 'MME', 'MMP11', 'MMP14', 'MMP16', 'MMP1', 'MMP2', 'MMP7', 'MMP9', 'MPP1', 'MRAP', 'MRAS', 'MSH2', 'MSH6', 'MSLN', 'MTA1', 'MTOR', 'MUC13', 'MUC16', 'MUC1', 'MUC4', 'MUC6', 'MUCL1', 'MYBL2', 'MYCN', 'MYC', 'NANOG', 'NCAM1', 'NCL', 'NCOA1', 'NCOA3', 'NCOR1', 'NDRG1', 'NF1', 'NF2', 'NFE2L2', 'NGF', 'NISCH', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NR1H4', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NRP1', 'NTF3', 'NTF4', 'OPCML', 'OSMR', 'PA2G4', 'PADI2', 'PAK1', 'PALB2', 'PAQR3', 'PARP1', 'PAX2', 'PCSK9', 'PDCD1LG2', 'PDCD1', 'PDCD4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PDGFRA', 'PDPN', 'PECAM1', 'PELP1', 'PEPD', 'PFKFB3', 'PGAP3', 'PGF', 'PGR', 'PI3', 'PIK3C2A', 'PIK3C2B', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIN1', 'PIP', 'PLAUR', 'PLAU', 'PLCG1', 'PLCG2', 'PLEK', 'PLG', 'PLXNB1', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPP3CA', 'PRDM10', 'PRF1', 'PRKACA', 'PRL', 'PROM1', 'PSCA', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'PTPN1', 'PTPRC', 'PTPRO', 'PTPRU', 'PTS', 'PXN', 'RAB25', 'RAD51', 'RAF1', 'RANBP2', 'RARA', 'RASA1', 'RASA2', 'RASSF1', 'RB1', 'RBPJ', 'RDX', 'RECK', 'REM1', 'REN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'S100A14', 'SCGB2A2', 'SCUBE2', 'SDC1', 'SDHC', 'SEMA3D', 'SEMA4D', 'SERPINB5', 'SERPINE1', 'SFRP1', 'PEAK1', 'SH3BGRL3', 'SH3BGRL', 'SH3TC2', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SIAH2', 'PMEL', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC4A7', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SMUG1', 'SMYD3', 'SNAI1', 'SNAI2', 'SOCS1', 'SOS1', 'SOX10', 'SOX2', 'SOX9', 'SP3', 'SPP1', 'SPRY2', 'SRCIN1', 'SRC', 'STARD3', 'STAT1', 'STAT2', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STOM', 'STUB1', 'SYP', 'TAGLN', 'TBX1', 'TERT', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TFRC', 'TGFA', 'TGFB1', 'THBS1', 'THRA', 'TIMP1', 'TJP1', 'TMPRSS2', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF4', 'TNFRSF8', 'TNFRSF9', 'TNFSF11', 'TNF', 'TNS1', 'TNS3', 'TNS4', 'TOB1', 'TOP1', 'TOP2A', 'TP53', 'TP63', 'TSC2', 'TWIST1', 'TYMS', 'TYR', 'UBA52', 'UBB', 'UBC', 'USP2', 'USP9X', 'VAV1', 'VAV2', 'VAV3', 'VCL', 'VEGFA', 'VEGFB', 'VEGFC', 'VIM', 'WASL', 'WDFY2', 'WDTC1', 'WNT10A', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7B', 'WNT9A', 'WNT9B', 'WT1', 'WWOX', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YES1', 'YY1', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 4.8946320039121656e-15 NRMSE: 8.338811189519337e-16 MAPE: 1.0611793238369922e-11 Pearson Correlation: 0.4218162748385488 Spearman Correlation: 0.3600721880792119 Coefficient of Determination: -4.034403548368591 RMSE: 2.0351699641568386 NRMSE: 0.3773725132870088 MAPE: 3661.542163990143 Predictor: ElasticNet Pearson Correlation: 0.8345600345282359 Spearman Correlation: 0.6594273262341127 Coefficient of Determination: 0.4329010599541865 RMSE: 0.7674710846850369 NRMSE: 0.1307513305083798 MAPE: 660.3209954801406 Pearson Correlation: 0.7748505434219849 Spearman Correlation: 0.6203346015022926 Coefficient of Determination: 0.3650028302001739 RMSE: 0.7227907182667475 NRMSE: 0.13402386765561794 MAPE: 430.7413838402179 Predictor: RandomForests Pearson Correlation: 0.8592275065106486 Spearman Correlation: 0.7016416755316447 Coefficient of Determination: 0.7329230976900414 RMSE: 0.5266847811685238 NRMSE: 0.08972942078275274 MAPE: 493.83700180961495 Pearson Correlation: 0.808275898810776 Spearman Correlation: 0.690173843290221 Coefficient of Determination: 0.6477535983426582 RMSE: 0.5383317006035483 NRMSE: 0.09982045255025929 MAPE: 358.447817975373 Protein: ERBB3 Protein Interaction Partners Count: 245 x_train_column_count: 247 x_train columns: ['ADAM17', 'AGRN', 'AGTR2', 'AKT1', 'AKT2', 'AKT3', 'ALAS2', 'ALB', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'APIP', 'AREG', 'AR', 'BAMBI', 'BDNF', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BTC', 'CADM4', 'CASK', 'CASP3', 'CBLB', 'CBLC', 'CBL', 'CCND1', 'CCNE1', 'CD44', 'CD82', 'CDC42', 'CDH1', 'CDK4', 'CDK5', 'CDKN1B', 'CDKN2A', 'CLEC16A', 'COMMD5', 'COQ7', 'CRKL', 'CRK', 'CRYZL1', 'CSF1', 'CSK', 'CSPG5', 'CTNNB1', 'DCN', 'DHH', 'DOCK7', 'DUSP6', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EIF4EBP1', 'EIF4E', 'EML4', 'EPCAM', 'EPGN', 'EPN1', 'ERBB2IP', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'ESR2', 'FBXO9', 'FGF10', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FIGF', 'FKBP14', 'FLNA', 'FLT3LG', 'FN1', 'FOXA1', 'FOXO3', 'FREM2', 'FTSJ1', 'GAB1', 'GAPDH', 'GLE1', 'GRB2', 'GRB7', 'GRHL2', 'HBEGF', 'HGF', 'HGS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPG2', 'IGF1', 'IGF2', 'IL6ST', 'ILK', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'ITPKB', 'JAK1', 'JAK2', 'JUN', 'KDR', 'KITLG', 'KRAS', 'L1CAM', 'LAMA1', 'LAMB1', 'LAMC2', 'LIN7A', 'LIN7B', 'LIN7C', 'LRIG1', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARCH7', 'MDM2', 'MET', 'MITF', 'MMP9', 'MRPL49', 'MTOR', 'MUC1', 'MUC4', 'MYC', 'N4BP1', 'NDRG1', 'NEDD4L', 'NEDD4', 'NF1', 'NGF', 'NICN1', 'NOTCH1', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NTF3', 'NTF4', 'OAT', 'PA2G4', 'PARK7', 'PCSK9', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PGR', 'PI3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIP5K1C', 'PLCG1', 'PLCG2', 'PPP1R9A', 'PRKACA', 'PTEN', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN22', 'PTPN2', 'RASA1', 'RASA2', 'REM1', 'RGS4', 'RHOA', 'RHOC', 'RNF41', 'ROR1', 'RRAS2', 'SH2B3', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SLC25A16', 'SMAD4', 'SNAI2', 'SOS1', 'SOX10', 'SOX2', 'SPARC', 'SPRY2', 'SRC', 'STAT3', 'STAT5A', 'STAT5B', 'SYN3', 'TCF7L2', 'TGFA', 'TMEFF2', 'TNFRSF13C', 'TNS1', 'TP53', 'USP8', 'VAV1', 'VAV2', 'VAV3', 'VEGFA', 'VEGFB', 'VEGFC', 'WNT1', 'WNT5A', 'ZEB1', 'ZNF217', 'KRBOX4', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.7535918580803058 Spearman Correlation: 0.7441165627330231 Coefficient of Determination: 0.5679006885649278 RMSE: 0.3018110564316248 NRMSE: 0.08145014166397915 MAPE: 167.6485439399196 Pearson Correlation: 0.20541522121317646 Spearman Correlation: 0.26358680078402286 Coefficient of Determination: -2.93818732107426 RMSE: 0.9238164048947778 NRMSE: 0.37068904279611975 MAPE: 341.6888790214507 Predictor: ElasticNet Pearson Correlation: 0.42109454148610476 Spearman Correlation: 0.4404387472788012 Coefficient of Determination: 0.07791463475075855 RMSE: 0.44088865433973184 NRMSE: 0.1189831935867061 MAPE: 209.76839072822497 Pearson Correlation: 0.3861326239412175 Spearman Correlation: 0.38716026138973936 Coefficient of Determination: 0.06795801890557884 RMSE: 0.44942292547262563 NRMSE: 0.18033469980764702 MAPE: 245.89387179576144 Predictor: RandomForests Pearson Correlation: 0.5720995884106573 Spearman Correlation: 0.5663929332364112 Coefficient of Determination: 0.30118296599150474 RMSE: 0.38381778930159044 NRMSE: 0.10358140513931847 MAPE: 235.7950036897269 Pearson Correlation: 0.39661158095516746 Spearman Correlation: 0.40844845435653027 Coefficient of Determination: 0.1484584351866245 RMSE: 0.42957639677532594 NRMSE: 0.17237111452528164 MAPE: 269.5480647617531 Fold: 2 Protein: RB1 Protein Interaction Partners Count: 369 x_train_column_count: 366 x_train columns: ['AATF', 'ABCC1', 'ABL1', 'ACTL6A', 'ACTL6B', 'AFAP1', 'AHR', 'AKT1', 'ANXA5', 'ARID1A', 'ARID1B', 'ARID4A', 'ARMCX1', 'ARMCX2', 'ARMCX3', 'ARNT', 'AR', 'ASF1A', 'ATF2', 'ATM', 'AURKB', 'BCR', 'BDP1', 'BGLAP', 'BRCA1', 'BRF1', 'FAM208A', 'C4BPA', 'CABIN1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CBFB', 'CBX1', 'CBX4', 'CBX5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNT2', 'CDC25A', 'CDC27', 'CDC6', 'CDH1', 'CDK14', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPA', 'CEBPB', 'CEBPD', 'CEBPE', 'CHEK1', 'CHEK2', 'CLNK', 'COL1A1', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUX1', 'DCAF10', 'DGKZ', 'DNAJA3', 'DNMT1', 'DNMT3A', 'DUSP1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EGFR', 'EGF', 'EID1', 'EIF2AK1', 'EIF2AK4', 'AGO2', 'ELF1', 'ENC1', 'EP300', 'ERBB2', 'ESD', 'ESR1', 'ESR2', 'EZH2', 'FBXW7', 'FMO5', 'FOS', 'FOXM1', 'FRK', 'FZR1', 'G6PD', 'GAPDH', 'GATA1', 'GJA1', 'GNB2L1', 'GRB2', 'GSC', 'GTF2H1', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HARS2', 'HARS', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC8', 'HDC', 'HES1', 'HIF1A', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HIST4H4', 'HMGA1', 'HMGA2', 'HRAS', 'HSP90AA1', 'HSPA1A', 'HSPA8', 'ID2', 'IFI16', 'INS', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'KDM2A', 'KDM4A', 'KDM5A', 'KDM5B', 'PPP1R26', 'KIF11', 'KRAS', 'KRT10', 'KRT14', 'KRT5', 'L3MBTL2', 'L3MBTL1', 'LIMD1', 'LIN52', 'LIN54', 'LIN9', 'LMNA', 'LOR', 'LPAR6', 'MAF', 'MAP2K7', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEF2C', 'MORF4L1', 'MRFAP1', 'MRPL11', 'MRPS18B', 'MSH6', 'MTL5', 'MYBL2', 'MYC', 'MYOD1', 'NACC2', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NCR1', 'NDC80', 'NEO1', 'NFYA', 'NFYB', 'NFYC', 'NGF', 'NOTCH1', 'NPM1', 'NRAS', 'ORC1', 'PA2G4', 'PAX2', 'PAX3', 'PAX5', 'PAX6', 'PAX8', 'PCNA', 'PELP1', 'PGR', 'PHB', 'PHF21B', 'PIAS4', 'PIK3CA', 'PIK3R1', 'PIK3R3', 'PLK1', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPIA', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP1R3A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R3B', 'PPRC1', 'PRB1', 'PRB3', 'PRB4', 'PRDM2', 'PRH1', 'PRH2', 'PRIM1', 'PRIM2', 'PRKCB', 'PRMT2', 'PSMA7', 'PSMC1', 'PSMD10', 'PTEN', 'PTGDR', 'RAF1', 'RB1CC1', 'RBAK', 'RBBP4', 'RBBP5', 'RBBP6', 'RBBP7', 'RBBP8', 'RBBP9', 'RBL1', 'RBL2', 'RBFOX2', 'RFC1', 'RPS6KB1', 'RUNX2', 'S100A6', 'SETD1B', 'SETD7', 'SIRT1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMC1A', 'SMC2', 'SMC4', 'SMC5', 'SMYD2', 'SNW1', 'SP100', 'SP1', 'SP3', 'SPI1', 'STAM', 'STAT3', 'SUV39H1', 'SUV420H2', 'SUZ12', 'TAF1', 'TBP', 'TERT', 'TFAP2A', 'TFDP1', 'TFDP3', 'TGM2', 'THAP1', 'TMPO', 'TNS1', 'TOP2A', 'TP53BP1', 'TP53', 'TP73', 'TRDMT1', 'TRIM27', 'TTK', 'UBE2I', 'UBE3A', 'UBL4A', 'UBN1', 'UBR4', 'UBTF', 'UHRF1', 'USP4', 'USP7', 'VEGFA', 'VPS39', 'WDR59', 'WDR73', 'WEE1', 'WWTR1', 'YAP1', 'YY1', 'ZBTB16', 'ZBTB7A', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.8222120971652734 Spearman Correlation: 0.7728642513585217 Coefficient of Determination: 0.6760327327249172 RMSE: 0.13378100287003275 NRMSE: 0.048925176590854574 MAPE: 419.3633586117943 Pearson Correlation: 0.1909095928668006 Spearman Correlation: 0.12357330992098334 Coefficient of Determination: -8.534536192569476 RMSE: 0.7562157705959163 NRMSE: 0.4332571934525308 MAPE: 1799.9685952625207 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: RandomForests Pearson Correlation: 0.5919612974425094 Spearman Correlation: 0.47126444887150715 Coefficient of Determination: 0.2043066486092442 RMSE: 0.20966056199598465 NRMSE: 0.07667516164276794 MAPE: 149.7410241705184 Pearson Correlation: 0.07542296428162835 Spearman Correlation: 0.12394888303580141 Coefficient of Determination: -0.025932392806574223 RMSE: 0.2480591867621438 NRMSE: 0.1421200552085709 MAPE: 194.5870804018028 Protein: CDH1 Protein Interaction Partners Count: 834 x_train_column_count: 826 x_train columns: ['ABCB1', 'ABCG2', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTR3', 'ACVR1B', 'ADAM10', 'ADAM15', 'ADAM17', 'ADAM9', 'AFP', 'AIMP1', 'AJAP1', 'AKAP9', 'AKT1', 'AKT2', 'AKTIP', 'ALB', 'ALCAM', 'ALDH1A1', 'ALDH3A1', 'ALK', 'AMOTL2', 'ANAPC4', 'ANAPC7', 'ANO1', 'ANXA2', 'ANXA5', 'AP1M1', 'AP1M2', 'APC2', 'APC', 'AQP1', 'AQP5', 'AREG', 'ARF6', 'ARHGAP31', 'ARID1A', 'ARL2BP', 'ARMC7', 'ARPC1A', 'ARPC2', 'ARRB2', 'ARVCF', 'AR', 'CLMP', 'ASF1A', 'ATF2', 'ATF3', 'ATM', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BAG3', 'BANP', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL6B', 'BCL9L', 'BCORL1', 'BMI1', 'BMP2', 'BMP4', 'BMP6', 'BMP7', 'BNIP3', 'BRCA1', 'BRCA2', 'BSG', 'BTBD7', 'BTC', 'BTF3', 'ANAPC15', 'CA2', 'CA9', 'CALCA', 'CALR', 'CAPN1', 'CAPNS1', 'CASP3', 'CASP8', 'CASP9', 'CASS4', 'CAV1', 'CBLL1', 'CBL', 'CBX7', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CCR7', 'CD1A', 'CD1B', 'CD1C', 'CD1E', 'CD207', 'CD24', 'CD274', 'CD276', 'CD2AP', 'CD34', 'CD44', 'CD46', 'CD68', 'CD82', 'CDC16', 'CDC23', 'CDC27', 'CDC42', 'CDC6', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH24', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK14', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN3', 'CDX2', 'CEACAM5', 'CFL1', 'CGN', 'CHGA', 'CHL1', 'CLCA2', 'CLDN1', 'CLDN2', 'CLDN3', 'CLDN4', 'CLDN5', 'CLDN7', 'CNTN1', 'COL1A1', 'CORO1C', 'CRB3', 'CREB1', 'CREBBP', 'CRYAB', 'YBX3', 'CSDC2', 'CSE1L', 'CSF2', 'CSNK2A1', 'CSNK2A2', 'CST5', 'CTBP1', 'CTBP2', 'CTCF', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTSL', 'CTTN', 'CXCL12', 'CXCL1', 'CXCR4', 'CYP1B1', 'DAAM1', 'DAB2IP', 'DACH1', 'DAPK1', 'DAP', 'DDR1', 'DDR2', 'DDX3X', 'DICER1', 'DKK1', 'DLC1', 'DLG1', 'DLG5', 'DNM2', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOT1L', 'DPAGT1', 'DPEP1', 'DSP', 'DUOX1', 'DUSP4', 'DVL1', 'DVL2', 'E2F1', 'ECT2', 'EDN1', 'EFEMP1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'EHD1', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'ELAVL1', 'ELF3', 'ENAH', 'ENG', 'EP300', 'EPB41L3', 'EPCAM', 'EPHA10', 'EPHA1', 'EPHA2', 'EPPK1', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ESRP1', 'ESRP2', 'ETS1', 'ETS2', 'EXOC3', 'EXOC4', 'EYA2', 'EZH2', 'EZR', 'F11R', 'F2RL2', 'SUPT20H', 'FBXL5', 'FER', 'FGF10', 'FGF13', 'FGF17', 'FGF19', 'FGF2', 'FGF4', 'FGF5', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FMN1', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC1', 'FOXC2', 'FOXJ2', 'FOXK2', 'FOXL1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXQ1', 'FRMPD2', 'FSCN1', 'FUT4', 'FXYD5', 'FYN', 'FZD1', 'FZD4', 'FZD7', 'FZR1', 'G6PD', 'GAB2', 'GABPA', 'GADD45A', 'GAPDH', 'GAS6', 'GATA1', 'GATA3', 'GATA4', 'GATA6', 'GDNF', 'GFRA1', 'GGT1', 'GJA1', 'GJB1', 'GJB2', 'GKN2', 'GLI1', 'GLI2', 'GMNN', 'GNA12', 'GNA13', 'GNB2L1', 'GNL3', 'GPA33', 'GRB2', 'GRHL2', 'GRHL3', 'GSK3B', 'GSN', 'GSTP1', 'H2AFZ', 'HAVCR2', 'HBEGF', 'HDAC1', 'HDAC2', 'HEPACAM', 'HES1', 'HGF', 'HGS', 'HIF1A', 'HMGA2', 'HNF4A', 'HOXB4', 'HOXD10', 'HPGDS', 'HPGD', 'HRAS', 'HSP90AA1', 'HSPA5', 'ICAM1', 'ID1', 'ID2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP3', 'IL10', 'IL15', 'IL17A', 'IL1B', 'IL24', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IQSEC1', 'IRS1', 'IRS2', 'ITGA5', 'ITGA6', 'ITGAE', 'ITGAM', 'ITGB1', 'ITGB4', 'ITGB7', 'ITPKB', 'IVL', 'JAG1', 'JAK2', 'AJUBA', 'JUN', 'JUP', 'KDM1A', 'KDM6A', 'KDR', 'KEAP1', 'KIFC3', 'KIT', 'KLF4', 'KLF5', 'KLF8', 'KLK3', 'KLK7', 'KLRG1', 'KRAS', 'KRT10', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'KRT9', 'LAMA1', 'LAMB1', 'LAMC2', 'LASP1', 'LATS1', 'LATS2', 'LCN2', 'LEF1', 'LEP', 'LGALS3', 'LGALS4', 'LGALS9', 'LGR5', 'LIF', 'LIMA1', 'LIN28A', 'LIPG', 'LLGL2', 'LMNA', 'LOR', 'LOXL2', 'LOXL3', 'LOX', 'LRP5', 'LRP6', 'LY6K', 'MACC1', 'MACROD1', 'MAD2L2', 'MAGI1', 'MAP2K1', 'MAP2K7', 'MAP4K5', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARK2', 'MARVELD2', 'MCAM', 'MCL1', 'MDM2', 'MED1', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGAT5', 'MGMT', 'MKI67', 'MLH1', 'MLLT4', 'MME', 'MMP11', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP1', 'MMP25', 'MMP27', 'MMP2', 'MMP3', 'MMP7', 'MMP8', 'MMP9', 'MPP5', 'MRAP', 'MSH2', 'MSN', 'MT1G', 'MTA1', 'MTA3', 'MTBP', 'MTDH', 'MTOR', 'MUC1', 'MUC4', 'MYCN', 'MYC', 'MYH6', 'MYO6', 'MYO7A', 'NANOG', 'NCAM1', 'NCOA1', 'NCSTN', 'NDRG1', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEUROG3', 'NF2', 'NFE2L2', 'NFIC', 'NKD2', 'NKX2-1', 'NKX6-1', 'NKX6-2', 'NME1', 'NOG', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NR2F1', 'NRP2', 'NUDT21', 'NUMBL', 'NUMB', 'NUP98', 'NUTF2', 'OTUB1', 'OVOL1', 'OVOL2', 'PARD3', 'PARD6A', 'PAX2', 'PAX5', 'PAX6', 'PAX8', 'PCSK9', 'PDCD4', 'PDGFRB', 'PDPN', 'PEBP1', 'PECAM1', 'PGR', 'PHLPP1', 'PI3', 'PIK3CA', 'PIK3R1', 'PIP5K1A', 'PIP5K1C', 'PIP', 'PIR', 'PITX1', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAUR', 'PLAU', 'PLCD1', 'PLEKHA7', 'PLG', 'PODXL', 'POLR2C', 'POSTN', 'POTEF', 'POU5F1', 'PPARA', 'PPARGC1A', 'PPARG', 'PPL', 'PPP6C', 'PRAME', 'PRDM10', 'PRKAR1A', 'PRKCA', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRKG1', 'PRMT5', 'PROC', 'PROM1', 'PRSS8', 'PSEN1', 'PTCH1', 'PTEN', 'PTF1A', 'PTGS2', 'PTK2', 'PTPN11', 'PTPN14', 'PTPRC', 'PTPRF', 'PTPRJ', 'PTPRM', 'PTPRS', 'PTPRT', 'PTPRU', 'PTRH2', 'PVRL1', 'PVRL2', 'PVR', 'PXN', 'RAB11A', 'RAB25', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RACGAP1', 'RAF1', 'RALA', 'RALBP1', 'RALGDS', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RARB', 'RASSF1', 'RB1', 'RBM4', 'RCOR1', 'RDX', 'REM1', 'RET', 'RHOA', 'RHOB', 'RHOC', 'RHOD', 'RICTOR', 'RND3', 'ROCK1', 'ROCK2', 'RPS6KB1', 'RPTOR', 'RRM2', 'RUNX2', 'RUNX3', 'S100A14', 'S100A4', 'S100A8', 'SATB1', 'SCRIB', 'SDC1', 'SDC4', 'SDHC', 'SELE', 'SELL', 'SELP', 'SEMA3C', 'SEMA3F', 'SENP1', 'SERPINB4', 'SERPINB5', 'SERPINE1', 'SFN', 'SFRP1', 'SFRP2', 'SFTPC', 'SHH', 'SIK1', 'SIN3A', 'SIRT1', 'SIRT2', 'SIRT4', 'SIRT7', 'SIX1', 'SIX2', 'SKIL', 'SKP2', 'SLC2A1', 'SLC39A6', 'SLC6A3', 'SLC9A3R1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SNAI1', 'SNAI2', 'SNAI3', 'SNX16', 'SNX1', 'SOX10', 'SOX17', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPARC', 'SPDEF', 'SPINT1', 'SPP1', 'SPRY1', 'SRCIN1', 'SRC', 'SRXN1', 'ST14', 'ST7L', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STX4', 'STYK1', 'SUCLG2', 'SUMO1', 'SUZ12', 'SYNJ2', 'SYP', 'TACC3', 'TACSTD2', 'TATDN1', 'TBX1', 'TBX3', 'TCF15', 'TCF4', 'TDGF1', 'TERT', 'TET2', 'TFF1', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBI', 'TGFBR1', 'TGFBR2', 'THBS1', 'THEM4', 'THUMPD1', 'THY1', 'TIAM1', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLN1', 'TLR4', 'TMPRSS2', 'TMPRSS4', 'TNFRSF6B', 'TNF', 'TNK2', 'TNS1', 'TP53BP1', 'TP53BP2', 'TP53', 'TRIM21', 'TRIM29', 'TRIM44', 'TRIP10', 'TRPS1', 'TSPYL2', 'TWIST1', 'TWIST2', 'TYRP1', 'T', 'UBE2I', 'UBE2S', 'USP48', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VEZT', 'VHL', 'VIM', 'VIPAS39', 'VPS33B', 'VTN', 'WASL', 'WDFY2', 'WDTC1', 'WIF1', 'WISP1', 'WISP3', 'WNT10A', 'WNT10B', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT9A', 'WNT9B', 'WT1', 'XIAP', 'YAP1', 'YBX1', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 6.502547266514589e-15 NRMSE: 1.0431615090261633e-15 MAPE: 9.615261973913003e-12 Pearson Correlation: 0.38362826274144385 Spearman Correlation: 0.39787337820700425 Coefficient of Determination: -2.335019219249907 RMSE: 2.1012661299119393 NRMSE: 0.37316038535108137 MAPE: 945.5655373656482 Predictor: ElasticNet Pearson Correlation: 0.6691003776555712 Spearman Correlation: 0.6312935178730343 Coefficient of Determination: 0.3422011525046511 RMSE: 0.908858217849084 NRMSE: 0.14580223275031426 MAPE: 336.5899992183781 Pearson Correlation: 0.6617385999938815 Spearman Correlation: 0.7086625695054142 Coefficient of Determination: 0.329544741642966 RMSE: 0.9421429232678822 NRMSE: 0.16731360739973045 MAPE: 168.83579352611605 Predictor: RandomForests Pearson Correlation: 0.7806867396346588 Spearman Correlation: 0.6867325687217668 Coefficient of Determination: 0.6038524604986277 RMSE: 0.705306791485822 NRMSE: 0.11314779682133985 MAPE: 183.36488246446947 Pearson Correlation: 0.6614671656077069 Spearman Correlation: 0.6570131133887294 Coefficient of Determination: 0.3963484324584017 RMSE: 0.8939743457162135 NRMSE: 0.15875942918064526 MAPE: 217.42057197521228 Protein: CDH2 Protein Interaction Partners Count: 472 x_train_column_count: 467 x_train columns: ['ABCG2', 'ABL1', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTR3', 'ADAM10', 'ADH1A', 'AFP', 'AHSG', 'AKT1', 'AKT3', 'ALB', 'ALCAM', 'ALDH1A1', 'AMBN', 'AMELX', 'AMOTL1', 'AMTN', 'ANGPT1', 'ANO8', 'ANXA5', 'APC2', 'APC', 'APLP2', 'APOA1', 'APOA2', 'APOA5', 'APOB', 'APOE', 'APOL1', 'APPL1', 'APP', 'ARHGAP32', 'ARMC7', 'ARPC5', 'ARVCF', 'AR', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BCL2L1', 'BDNF', 'BMI1', 'BMP15', 'BMP2', 'BMP4', 'BMP7', 'BNIP2', 'BOC', 'BPIFB2', 'RGCC', 'GSKIP', 'C3', 'C4A', 'CABLES1', 'CADM1', 'CALU', 'CASP3', 'CAV1', 'CBLL1', 'CCNA2', 'CCNB1', 'CCND1', 'CD24', 'CD34', 'CD44', 'CD80', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK4', 'CDK5', 'CDK6', 'CDKN2A', 'CDON', 'CDX2', 'CEBPZ', 'CFL1', 'CHGB', 'CHL1', 'CHRDL1', 'CKAP4', 'CLDN11', 'CLDN3', 'CLDN4', 'CLDN7', 'CORT', 'CP', 'CREBBP', 'CRP', 'CSF1', 'CSK', 'CST3', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTTN', 'CXCL12', 'CXCR4', 'CYLD', 'CYR61', 'DBN1', 'DDR1', 'DDR2', 'DKK1', 'DLG4', 'DLG5', 'DMP1', 'DNAJC3', 'DSP', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EFNB2', 'EFNB3', 'EGFR', 'EGF', 'EHMT2', 'EIF2AK3', 'ENAM', 'ENG', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA4', 'EPHB2', 'EPS8', 'ERBB2', 'ERBB4', 'ESR1', 'ESRP1', 'EXOC4', 'EZH2', 'EZR', 'F11R', 'F5', 'EVA1A', 'FAM20A', 'FAM20C', 'FBN1', 'FER', 'FGA', 'FGF13', 'FGF23', 'FGF2', 'FGFR1', 'FGFR4', 'FGG', 'FN1', 'FOXC2', 'FOXD3', 'FOXO1', 'FOXP4', 'FSTL1', 'FSTL3', 'FUCA2', 'GAA', 'GAPDH', 'GAS6', 'GATA4', 'GFAP', 'GJA10', 'GJA1', 'GJA3', 'GJB6', 'GJC1', 'GJC3', 'GJD3', 'GJD4', 'GLI1', 'GOLM1', 'GPC3', 'GRIA1', 'GRIA2', 'HGF', 'HMGA2', 'HNF4A', 'HRAS', 'HRC', 'HSP90B1', 'HSPA5', 'IARS2', 'IGF1R', 'IGF1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL1B', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'INVS', 'IQGAP1', 'ISL1', 'ITGA6', 'ITGB1', 'ITIH2', 'ITPKB', 'JAG1', 'JAM3', 'JUN', 'JUP', 'KCNA5', 'KDR', 'KIAA2022', 'KIF5B', 'KIT', 'KLF4', 'KNG1', 'KRAS', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT8', 'KTN1', 'L1CAM', 'LAMB1', 'LAMB2', 'LAMC1', 'LEF1', 'LGALS1', 'LRP5', 'LRP6', 'LRRC7', 'LTBP1', 'LTBP3', 'MAP1B', 'MAP2K6', 'MAP2K7', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MATN3', 'MBTPS1', 'MCAM', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEPE', 'MET', 'MFGE8', 'MFI2', 'MGAT4A', 'MIA3', 'MKI67', 'MLLT4', 'MMP14', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MPDZ', 'MPP5', 'MRAP', 'MRPL49', 'MSLN', 'MSN', 'MTHFD1', 'MUC1', 'MUC4', 'MXRA8', 'MYC', 'MYO10', 'MZF1', 'NANOG', 'NCAM1', 'NCSTN', 'NDRG1', 'NENF', 'NES', 'NFASC', 'NGF', 'NKX2-5', 'NLGN1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTUM', 'NRCAM', 'NT5C', 'NT5E', 'NTRK2', 'NUCB1', 'NUMBL', 'NUMB', 'OLFM3', 'P4HB', 'PARD3', 'PAX6', 'PCSK9', 'PC', 'PDGFRB', 'PDIA4', 'PDIA6', 'PECAM1', 'PENK', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PITX2', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PNPLA2', 'POU5F1', 'PPT2', 'PRKCDBP', 'PRKCSH', 'PROC', 'PROM1', 'PRPH', 'PRSS23', 'PSEN1', 'PTEN', 'PTK2', 'PTPN11', 'PTPN1', 'PTPN2', 'PTPRC', 'PTPRS', 'PVRL1', 'PVRL2', 'PVRL3', 'PXN', 'QSOX1', 'RAB11FIP1', 'RAB3D', 'RAB5A', 'RAC1', 'RCN1', 'RELN', 'REM1', 'RHOA', 'RHOB', 'RHOC', 'ROBO1', 'PTBP3', 'RPS6KB1', 'RUNX2', 'S100A14', 'S100A4', 'SARS2', 'SCARB2', 'SCG2', 'SCG3', 'SDC2', 'SEMA3A', 'SENP3', 'SERPINA10', 'SERPINA1', 'SERPINC1', 'SERPIND1', 'SERPINE1', 'SHH', 'SHISA5', 'SIRT7', 'SKP1', 'SLC2A1', 'SLC9A3R1', 'SLIT1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SNAI1', 'SNAI2', 'SNAI3', 'SOX10', 'SOX18', 'SOX1', 'SOX2', 'SOX4', 'SOX9', 'SP7', 'SPAG9', 'SPARCL1', 'SPARC', 'SPP1', 'SPP2', 'SRC', 'ST6GALNAC5', 'STAT3', 'STC2', 'SYP', 'TBX1', 'TCF3', 'TEK', 'TF', 'TGFB1', 'TGFBR1', 'TGM2', 'TGOLN2', 'THY1', 'TIMP1', 'TJP1', 'TJP3', 'TMEM132A', 'TNC', 'TNF', 'TNNT1', 'TP53', 'TRPS1', 'TSC2', 'TWIST1', 'TWIST2', 'USP9X', 'VANGL2', 'VCAM1', 'VCAN', 'VCL', 'VEGFA', 'VGF', 'VIM', 'VTN', 'VWA1', 'WFS1', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7A', 'XIRP1', 'ZBTB16', 'ZEB1', 'ZEB2', 'ZSCAN1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.9445075352242429 Spearman Correlation: 0.9175540951224843 Coefficient of Determination: 0.892094484095375 RMSE: 0.1209165140289743 NRMSE: 0.043813506061661824 MAPE: 472.83839110432905 Pearson Correlation: -0.08800783831715063 Spearman Correlation: -0.08461613501121844 Coefficient of Determination: -32.74175805826257 RMSE: 2.2484591892073236 NRMSE: 1.184540472775001 MAPE: 2373.5121135660875 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: RandomForests Pearson Correlation: 0.5482233699794163 Spearman Correlation: 0.47495578566105146 Coefficient of Determination: 0.1763585814493952 RMSE: 0.33406646720396765 NRMSE: 0.1210473466207579 MAPE: 450.2023217682974 Pearson Correlation: 0.23214368046879802 Spearman Correlation: 0.33307969954150823 Coefficient of Determination: 0.04108356361491117 RMSE: 0.3790456676193911 NRMSE: 0.199690052850583 MAPE: 110.18428875041191 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.5750222934418499 Spearman Correlation: 0.5464477708979472 Coefficient of Determination: 0.33065063795512495 RMSE: 0.16993269557651747 NRMSE: 0.12789106558632488 MAPE: 280.55992040683975 Pearson Correlation: 0.15129344217314186 Spearman Correlation: 0.33341137450004876 Coefficient of Determination: -0.454023866366031 RMSE: 0.23866673811947609 NRMSE: 0.19638503918330957 MAPE: 1617.3596664548618 Predictor: ElasticNet Pearson Correlation: 0.3814299259959926 Spearman Correlation: 0.4154524392424565 Coefficient of Determination: 0.014565408672729374 RMSE: 0.20618849143367712 NRMSE: 0.15517711757368097 MAPE: 119.40599335492294 Pearson Correlation: 0.18947905463115441 Spearman Correlation: 0.2469076187689006 Coefficient of Determination: -0.1359977624859552 RMSE: 0.21095745042217207 NRMSE: 0.1735846707991213 MAPE: 297.60223372027184 Predictor: RandomForests Pearson Correlation: 0.5643420869215559 Spearman Correlation: 0.5595064484259596 Coefficient of Determination: 0.2915569262179636 RMSE: 0.17482478344760996 NRMSE: 0.1315728428255627 MAPE: 361.8509709984862 Pearson Correlation: 0.26611478629025903 Spearman Correlation: 0.37114427860696525 Coefficient of Determination: -0.07708413457356866 RMSE: 0.20541442796788412 NRMSE: 0.1690236385813249 MAPE: 1459.15447534378 Protein: PTEN Protein Interaction Partners Count: 884 x_train_column_count: 876 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ABTB1', 'ACTB', 'ACTG1', 'ADM', 'AEBP1', 'AFP', 'AKT1S1', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'AMHR2', 'ANXA2', 'ANXA5', 'APAF1', 'APC', 'ARAF', 'AREG', 'ARHGAP21', 'ARID1A', 'ARID2', 'ARL2BP', 'AR', 'ATF3', 'ATG12', 'ATG5', 'ATG7', 'ATM', 'ATRX', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'AXL', 'BAD', 'BAG5', 'BARD1', 'BAX', 'BBC3', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BIRC3', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BNIP3', 'BRAF', 'BRCA1', 'BRCA2', 'BRD4', 'BTG2', 'BTK', 'SPRTN', 'CLHC1', 'CA9', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBL', 'CBX7', 'CCL2', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD24', 'CD274', 'CD34', 'CD44', 'CD79A', 'CD79B', 'CDC14A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC7', 'CDH17', 'CDH1', 'CDH2', 'CDIPT', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CENPC', 'CFL1', 'CFLAR', 'CFTR', 'CHD1', 'CHD8', 'CHEK1', 'CHEK2', 'CHKA', 'CHORDC1', 'CHUK', 'CLTCL1', 'CLTC', 'CNOT6L', 'CREB1', 'CREBBP', 'CRP', 'CSF1R', 'CSF1', 'CSK', 'CSN2', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTGF', 'CTLA4', 'CTNNB1', 'CUL1', 'CUL3', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'DAPK1', 'DAXX', 'DBN1', 'DCAF13', 'DDIT4', 'DDR2', 'DECR1', 'DEPTOR', 'DGCR8', 'DICER1', 'DLC1', 'DLG1', 'DLG4', 'DNM1L', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOLPP1', 'DUSP1', 'DUSP6', 'DUT', 'DVL1', 'DYRK1A', 'E2F1', 'E2F2', 'E2F3', 'ECSCR', 'EGFR', 'EGF', 'EGR1', 'EIF2AK2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4EBP2', 'EIF4E', 'EIF4G1', 'EML4', 'ENDOG', 'EP300', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA3', 'EPHA4', 'EPHA5', 'EPHA7', 'EPHB1', 'EPHB2', 'EPHB3', 'EPHB4', 'ERBB2', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ESR1', 'ETS1', 'ETS2', 'ETV1', 'ETV6', 'EYA2', 'EZH2', 'EZR', 'FABP4', 'FASLG', 'FASN', 'FBXW7', 'FCGR1B', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FIG4', 'FKBP1A', 'FLCN', 'FLT1', 'FLT3', 'FLT4', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXG1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FOXP3', 'FRK', 'FYN', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GCK', 'GDF10', 'GDF2', 'GFAP', 'GJA1', 'GLI1', 'GNA11', 'GNAQ', 'GNAS', 'GNRHR', 'GRASP', 'GRB2', 'GRPR', 'GSK3A', 'GSK3B', 'GSTP1', 'H1F0', 'H2AFX', 'HAVCR2', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HES1', 'HGF', 'HIF1A', 'HIST1H2BA', 'HK1', 'HK2', 'HMGA2', 'HNF4A', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA1A', 'HSPA1B', 'HSPA2', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'ID1', 'ID4', 'IDH1', 'IDH2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL17A', 'IL21', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INPP4A', 'INPP4B', 'INPP5A', 'INPP5B', 'INPP5D', 'INPP5E', 'INPP5F', 'INPP5J', 'INPP5K', 'INPPL1', 'INSRR', 'INSR', 'INS', 'IPMK', 'IPO11', 'IQGAP1', 'IRAK1', 'IRS1', 'IRS2', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'ITPR3', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUN', 'KAT2B', 'KDM5B', 'KDM5C', 'KDM6A', 'KDR', 'KEAP1', 'ATG13', 'KIF11', 'KLLN', 'KITLG', 'KIT', 'KLF17', 'KLF2', 'KLF4', 'KLK3', 'KPNA1', 'KPNA2', 'KPNA5', 'KPNA6', 'KPNA7', 'KRAS', 'KRT14', 'KRT5', 'KRT8', 'LASP1', 'LATS1', 'LATS2', 'LCK', 'LDHA', 'LEF1', 'LEP', 'LGALS3', 'LIG4', 'LOX', 'LRIG1', 'LRP1B', 'LRRK2', 'LYN', 'LYPD1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAN2C1', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K3', 'MAP2K4', 'MAP2K7', 'MAP3K1', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK4', 'MAPK6', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAP1', 'MAPT', 'MARCH2', 'MARCH3', 'MAST1', 'MAST2', 'MAST3', 'MAST4', 'MATK', 'MCL1', 'MCM2', 'MCM7', 'MCRS1', 'MDK', 'MDM2', 'MDM4', 'MECOM', 'MECP2', 'MED12', 'MEN1', 'MET', 'MGMT', 'MINPP1', 'MITF', 'MKI67', 'MKRN1', 'MLH1', 'MLH3', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT1', 'MLST8', 'MME', 'MMP2', 'MMP9', 'MOV10', 'MRAP', 'MRE11A', 'MSH2', 'MSH6', 'MTDH', 'MTMR2', 'MTOR', 'MTSS1', 'MUTYH', 'MVP', 'MYCN', 'MYC', 'MYLK', 'MYOCD', 'NANOG', 'NCKAP1', 'NCOA3', 'NCOR2', 'NDFIP1', 'NDFIP2', 'NDRG1', 'NDRG2', 'NEDD4L', 'NEDD4', 'NES', 'NF1', 'NF2', 'NFATC1', 'NFATC4', 'NFE2L2', 'NFKBIA', 'NGFR', 'NKX3-1', 'NLGN3', 'NLGN4X', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR1H4', 'NR3C2', 'NRAS', 'NRP2', 'NTRK1', 'NTRK2', 'NUMB', 'OCRL', 'OLIG2', 'OTUD3', 'PALB2', 'PARD3', 'PARD6A', 'PARD6B', 'PARD6G', 'PARK2', 'PARK7', 'PARP1', 'PAX8', 'PBK', 'PBRM1', 'PCGF2', 'PCSK9', 'PDCD1', 'PDCD4', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PDK1', 'PDK2', 'PDPK1', 'PDZK1', 'PECAM1', 'PGM3', 'PGR', 'PHF6', 'PHLPP1', 'PHLPP2', 'PI3', 'PI4K2A', 'PI4K2B', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIK3R5', 'PIKFYVE', 'PINK1', 'PIP4K2A', 'PIP4K2B', 'PIP4K2C', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PIP5KL1', 'PKM', 'PLCB1', 'PLCB2', 'PLCB3', 'PLCB4', 'PLCD1', 'PLCD3', 'PLCD4', 'PLCE1', 'PLCG1', 'PLCG2', 'PLCH1', 'PLCH2', 'PLCZ1', 'PLEKHA1', 'PLEK', 'PLK1', 'PLK2', 'PLK3', 'BPIFA1', 'PMAIP1', 'PML', 'PMPCA', 'PMS1', 'PMS2', 'POLE', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPM1D', 'PPP2R1A', 'PPP2R4', 'PPP2R5A', 'PPP2R5E', 'PPP3CA', 'PPP6C', 'PRDX1', 'PREX2', 'PRKAA1', 'PRKAA2', 'PRKCI', 'PRKCZ', 'PRKDC', 'PRMT5', 'PROM1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTER', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPMT1', 'PTPN11', 'PTPN12', 'PTPN13', 'PTPN1', 'PTPRC', 'PTPRD', 'PTS', 'PXN', 'RAB7A', 'RAC1', 'RAC2', 'RAD51C', 'RAD51D', 'RAD51', 'RAD52', 'RAF1', 'RASA1', 'RASSF1', 'RB1CC1', 'RB1', 'RBL1', 'RBL2', 'RBM38', 'RBFOX2', 'RCN1', 'RECK', 'RELA', 'REL', 'REM1', 'RETN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'DROSHA', 'RNF146', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KB1', 'RPS6KB2', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'RRM1', 'RSL1D1', 'RUNX3', 'RWDD3', 'SACM1L', 'SALL4', 'SCAI', 'SCGB1D4', 'SCRIB', 'SDHB', 'SDHC', 'SERPINA1', 'SERPINA4', 'SERPINB5', 'SESN1', 'SESN2', 'SETD2', 'SGK1', 'SGK2', 'SGK3', 'SHANK2', 'SHARPIN', 'SHC1', 'SHFM1', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT5', 'SIRT6', 'SIRT7', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC2A4', 'SLC34A2', 'SLC9A3R1', 'SLC9A3R2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNCA', 'SNX27', 'SOCS1', 'SOCS3', 'SOD2', 'SOS1', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPOP', 'SPRY1', 'SPRY2', 'SRBD1', 'SRC', 'SREBF1', 'SRF', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STMN1', 'STUB1', 'STX16', 'SUCLG2', 'SUMO1', 'SYK', 'SYNJ1', 'SYNJ2', 'TACSTD2', 'TBX1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TEP1', 'TERT', 'TET1', 'TGFB1', 'TGFBR1', 'TGFBR2', 'TGM2', 'THBS1', 'TIMP1', 'TIMP3', 'TJP1', 'TLR4', 'TMEM55A', 'TMEM55B', 'TMPRSS2', 'TNFRSF10B', 'TNFSF10', 'TNF', 'TNKS2', 'TNKS', 'TNPO2', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TPM1', 'TRAF6', 'TRIM27', 'TRIM29', 'TSC1', 'TSC2', 'TTN', 'TUT1', 'TWIST1', 'TWSG1', 'TXN', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2E1', 'UBE2I', 'UBE2L3', 'UBE3A', 'ULK1', 'ULK2', 'USP10', 'USP13', 'USP18', 'USP28', 'USP7', 'USP8', 'UTF1', 'UVRAG', 'VCL', 'VDR', 'VEGFA', 'VHL', 'WDR18', 'WDTC1', 'WEE1', 'WIPI1', 'WIPI2', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT9A', 'WNT9B', 'WT1', 'WWP1', 'WWP2', 'XIAP', 'XPO1', 'XPO5', 'YAP1', 'YES1', 'YWHAB', 'YWHAZ', 'YY1', 'ZEB1', 'ZEB2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 2.7886239687887538e-15 NRMSE: 4.3602907806875986e-16 MAPE: 2.576833627805444e-12 Pearson Correlation: 0.09188364436324517 Spearman Correlation: 0.09646863720612625 Coefficient of Determination: -3.2554493575871293 RMSE: 1.055428592846005 NRMSE: 0.3539806120358214 MAPE: 1030.9790368480517 Predictor: ElasticNet Pearson Correlation: 0.41751956409611385 Spearman Correlation: 0.4257911290880026 Coefficient of Determination: 0.07556993678704249 RMSE: 0.5997183332253249 NRMSE: 0.09377192294978107 MAPE: 284.153158878423 Pearson Correlation: 0.28628561737956837 Spearman Correlation: 0.2703004584918545 Coefficient of Determination: 0.054503925745020165 RMSE: 0.49749189220654805 NRMSE: 0.16685400194746045 MAPE: 489.5015895571665 Predictor: RandomForests Pearson Correlation: 0.5923384886626772 Spearman Correlation: 0.5372839462573086 Coefficient of Determination: 0.30702419690994753 RMSE: 0.5192414215132102 NRMSE: 0.08118855781615357 MAPE: 252.1519350856801 Pearson Correlation: 0.31672049556530973 Spearman Correlation: 0.34155614845859655 Coefficient of Determination: 0.0874892282862324 RMSE: 0.4887369139265927 NRMSE: 0.16391766632901553 MAPE: 493.99105733534475 Protein: BRCA2 Protein Interaction Partners Count: 361 x_train_column_count: 351 x_train columns: ['ABL1', 'ACHE', 'ADRB1', 'ADRB2', 'AKT1', 'ALK', 'APEX1', 'ARID1A', 'ARPC1A', 'AR', 'ATAD5', 'ATM', 'ATRIP', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'B3GALTL', 'BACH1', 'BARD1', 'BCCIP', 'BCHE', 'BDNF', 'BECN1', 'BIRC5', 'BLM', 'BMI1', 'BRCA1', 'BRCC3', 'BRE', 'BRIP1', 'SLX4', 'BUB1B', 'BUB1', 'BUB3', 'SFR1', 'RHNO1', 'RMI2', 'BABAM1', 'MMS22L', 'CASC1', 'CASC5', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCNE1', 'CDC25A', 'CDC25C', 'CDC45', 'CDC6', 'CDH1', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CENPE', 'CENPF', 'CEP55', 'CHEK1', 'CHEK2', 'CHRNA1', 'CLSPN', 'CNTROB', 'CREM', 'CSMD3', 'CTNNB1', 'CYP19A1', 'DMC1', 'DNA2', 'DSN1', 'DYNC1LI2', 'EGFR', 'EGF', 'ELAC2', 'EME1', 'EME2', 'ENAM', 'EPCAM', 'ERBB2', 'ERBB3', 'ERCC1', 'ERCC2', 'ERCC4', 'ERCC5', 'ERCC6', 'ERCC8', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM175A', 'FANCA', 'FANCB', 'FANCC', 'FANCD2', 'FANCE', 'FANCF', 'FANCG', 'FANCI', 'FANCL', 'FANCM', 'FBN1', 'FBXO18', 'FBXW7', 'FEN1', 'FGFR2', 'FHIT', 'FLNA', 'FOXM1', 'GAPDH', 'GEN1', 'SLX1B', 'H2AFX', 'HELQ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HMG20A', 'HMG20B', 'HMMR', 'HNRNPC', 'HOXB13', 'HRAS', 'HUS1', 'ITPKB', 'KAT2B', 'KAT5', 'KEAP1', 'SPIDR', 'KIF23', 'KIF4A', 'KIT', 'KLK3', 'KRAS', 'KRT5', 'LIG1', 'LIG3', 'LIG4', 'LIMD1', 'LSP1', 'MAD2L2', 'MAGED1', 'MAMSTR', 'MAP2K2', 'MAP3K1', 'MCM10', 'MCPH1', 'MDC1', 'MDM2', 'MDM4', 'MEN1', 'MGMT', 'MKI67', 'MLH1', 'MLH3', 'KMT2C', 'MND1', 'MORF4L1', 'MRE11A', 'MRPL36', 'MSH2', 'MSH3', 'MSH4', 'MSH5', 'MSH6', 'MTA2', 'FAN1', 'MUC1', 'MUS81', 'MUTYH', 'MYC', 'NBN', 'NCAPG', 'NEDD4', 'NF1', 'NHEJ1', 'NNT', 'NOTCH1', 'NSL1', 'NSMCE4A', 'OBFC1', 'OGG1', 'PALB2', 'PARG', 'PARP1', 'PARP2', 'PARP3', 'PAXIP1', 'PCNA', 'PDLIM7', 'PDS5A', 'PDS5B', 'PGR', 'PIK3CA', 'PLCB4', 'PLEC', 'PLEKHH1', 'PLK1', 'PMS1', 'PMS2', 'PNOC', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'POLN', 'POLQ', 'PRDM9', 'PRKDC', 'PRSS1', 'PSMC3IP', 'PSMD3', 'PSMD6', 'PTEN', 'RAD17', 'RAD18', 'RAD1', 'RAD21', 'RAD23B', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD52', 'RAD54B', 'RAD54L', 'RAD9A', 'RAD9B', 'RAG2', 'RASSF1', 'RBBP8', 'RBMX', 'RECQL4', 'RECQL5', 'RECQL', 'RET', 'REV1', 'REV3L', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RNF168', 'RNF8', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SKP2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCAL1', 'SMARCB1', 'SMC1A', 'SMC2', 'SMC3', 'SMC4', 'SMC5', 'SMC6', 'SMUG1', 'SNAI2', 'SP1', 'SPO11', 'STAT5A', 'STK11', 'STRA13', 'SUV39H1', 'SYCP3', 'TBCE', 'TDP1', 'TERT', 'TEX15', 'TMPRSS2', 'TNS1', 'TOP1', 'TOP2A', 'TOP3A', 'TOP3B', 'TOPBP1', 'TOX3', 'TP53BP1', 'TP53', 'TPX2', 'TRIP12', 'PRSS58', 'TTK', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2D1', 'UBE2E2', 'UBE2E3', 'UBE2N', 'UBE2T', 'UIMC1', 'USF1', 'USP11', 'USP15', 'USP1', 'USP21', 'USP4', 'UVRAG', 'VEGFA', 'VWF', 'WDR48', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WTIP', 'XPA', 'XPO1', 'XRCC1', 'XRCC2', 'XRCC3', 'XRCC4', 'XRCC5', 'XRCC6', 'ZFYVE26', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.8345098307368036 Spearman Correlation: 0.8116168222988233 Coefficient of Determination: 0.6964066575963686 RMSE: 0.10762238460599496 NRMSE: 0.06933315162248026 MAPE: 286.855444536456 Pearson Correlation: -0.03689063032778463 Spearman Correlation: -0.04530777485123403 Coefficient of Determination: -2.744486588498332 RMSE: 0.3738313634864551 NRMSE: 0.2530452664512703 MAPE: 899.6639137226019 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: RandomForests Pearson Correlation: 0.5785687737545514 Spearman Correlation: 0.5134262809924671 Coefficient of Determination: 0.196163172604347 RMSE: 0.17512189109946347 NRMSE: 0.11281809702010853 MAPE: 181.78134862320357 Pearson Correlation: 0.31303320234229776 Spearman Correlation: 0.31835430689688815 Coefficient of Determination: 0.06397658885597002 RMSE: 0.18690587408250395 NRMSE: 0.12651599445114087 MAPE: 128.41740179579563 Protein: CDKN2A Protein Interaction Partners Count: 612 x_train_column_count: 605 x_train columns: ['ABCC1', 'ABL1', 'ACAP1', 'ACAP2', 'ACP5', 'ACTA1', 'ACTB', 'ACTG1', 'ADAMTS9', 'ADAP1', 'AFP', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD12', 'ANXA5', 'AP3D1', 'AP3S1', 'AP3S2', 'APAF1', 'APBA1', 'APBA2', 'ARAP1', 'ARAP2', 'ARF1', 'ARF3', 'ARF4', 'ARF5', 'ARF6', 'ARFGAP1', 'ARFGAP3', 'ARFIP2', 'ARFRP1', 'ARID1A', 'ARID2', 'ARID5B', 'ARL10', 'ARL1', 'ARL2', 'ARL3', 'ARL4A', 'ARL5A', 'AR', 'ASAP1', 'ATM', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'AXIN1', 'BAP1', 'BCL2L11', 'BCL2L1', 'BCL6', 'BECN1', 'BIRC5', 'BMI1', 'BRAF', 'BRCA1', 'BRCA2', 'BUB1B', 'RGCC', 'C1QBP', 'RABL6', 'CACNA1G', 'CADM1', 'CAMK1D', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNL1', 'CD274', 'CD34', 'CD44', 'CDC123', 'CDC20', 'CDC25A', 'CDC25C', 'CDC42', 'CDC45', 'CDC5L', 'CDC6', 'CDC7', 'CDH13', 'CDH17', 'CDH1', 'CDH2', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5RAP3', 'CDK6', 'CDK7', 'CDKAL1', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDX2', 'CEACAM5', 'CEBPB', 'CEBPE', 'CHEK1', 'CHEK2', 'CHFR', 'CHKA', 'COMMD1', 'CRABP1', 'CREBBP', 'CSF1R', 'CSF1', 'CSF2', 'CTBP1', 'CTBP2', 'CTCF', 'CTLA4', 'CTNNB1', 'CTSK', 'CUL1', 'CUL3', 'CXCR4', 'CYCS', 'CYLD', 'CYTH1', 'CYTH2', 'CYTH3', 'DAB2IP', 'DAP', 'DAXX', 'DICER1', 'DIRAS3', 'DLEC1', 'DMTF1', 'DNAH3', 'DNMT1', 'DNMT3A', 'DNMT3B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EBF1', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EP300', 'EPCAM', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ETS1', 'ETV6', 'EWSR1', 'EZH1', 'EZH2', 'FAT1', 'FBXW7', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FKBP2', 'FLT3', 'FMN2', 'FN1', 'FOS', 'FOXA1', 'FOXM1', 'FOXN2', 'FOXO1', 'FOXO3', 'FTO', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GATA4', 'GATA5', 'GBF1', 'GDF15', 'GGA1', 'GGA2', 'GGA3', 'GIT1', 'GIT2', 'GLI1', 'GLTSCR2', 'GMNN', 'GNA11', 'GNAQ', 'GNAS', 'GNL3', 'GOLPH3', 'GP5', 'GSPT1', 'GSTP1', 'H2AFX', 'H2AFZ', 'H3F3A', 'H3F3B', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC9', 'HELLS', 'HGF', 'HHEX', 'HIC1', 'HIF1A', 'HIST1H2BA', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AA3', 'HIST2H2AC', 'HIST2H4A', 'HIST4H4', 'HLTF', 'HMGA2', 'HNF4A', 'HNRNPD', 'HOPX', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA4', 'HSPA9', 'HUWE1', 'ID1', 'IDH1', 'IDH2', 'IGF1R', 'IGF1', 'IGF2BP2', 'IGF2R', 'IGF2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING4', 'INS', 'IQSEC1', 'IRS1', 'ISOC2', 'ITGAM', 'JAK1', 'JAK2', 'JAK3', 'JAZF1', 'JUNB', 'JUN', 'KAT2B', 'KAT5', 'KCNJ11', 'KCNQ1', 'KDM1A', 'KDM2B', 'KDM6A', 'KDM6B', 'KDR', 'KEAP1', 'KIAA1549', 'KIT', 'KLF4', 'KRAS', 'KRT19', 'KRT20', 'KRT5', 'KRT7', 'LATS2', 'LOX', 'LRRK2', 'MACROD2', 'MAF', 'MAP2K1', 'MAP2K4', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MAX', 'MC1R', 'MCL1', 'MCM10', 'MCM2', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEN1', 'MEOX1', 'MEOX2', 'MET', 'MGMT', 'MITF', 'MKRN1', 'MLANA', 'MLH1', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT3', 'MME', 'MMP2', 'MMP7', 'MMP9', 'MOV10', 'MRAS', 'MSH2', 'MSH6', 'MTA1', 'MTAP', 'MTHFR', 'MTNR1B', 'MTOR', 'MUC1', 'MYBL2', 'MYCL', 'MYCN', 'MYC', 'MYOD1', 'KAT6A', 'NANOG', 'NCAM1', 'NCL', 'NCOR1', 'NES', 'NEUROG1', 'NF1', 'NF2', 'NFATC1', 'NFE2L2', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NPM1', 'NRAS', 'NSUN2', 'ORC4', 'ORC5', 'OSBP2', 'P2RY8', 'PA2G4', 'PALB2', 'PARP1', 'PAX3', 'PAX5', 'PAX8', 'PBRM1', 'PCGF2', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PEX19', 'PGR', 'PHLDB1', 'PI3', 'PIAS2', 'PIGF', 'PIK3CA', 'PIK3R1', 'PIP4K2A', 'PLEKHA3', 'PLEKHA8', 'PLEK', 'PLK1', 'PMAIP1', 'PML', 'PMS2', 'POTEF', 'POU5F1', 'PPARA', 'PPARG', 'PPM1D', 'PPP1R9B', 'PPP3CA', 'PRDM2', 'PRMT6', 'PROM1', 'PRSS1', 'PSMC3', 'PSMD10', 'PSME3', 'PTCH1', 'PTEN', 'PTER', 'PTF1A', 'PTGS2', 'PTPN11', 'PTPRC', 'PTPRD', 'PXN', 'RAB11A', 'RAB5A', 'RABEP1', 'RABGEF1', 'RAC2', 'RAD51', 'RAF1', 'RAP2B', 'RARB', 'RASSF1', 'RASSF2', 'RB1', 'RBL1', 'RBL2', 'RCC1', 'RELA', 'RELB', 'REL', 'RET', 'RHOA', 'DROSHA', 'RNF2', 'RNF43', 'ROS1', 'RPL11', 'RPRM', 'RPS27A', 'RPS6KB1', 'RRAS2', 'RRAS', 'RTEL1', 'RUNX2', 'RUNX3', 'SDHC', 'SENP1', 'SENP3', 'SERPINE1', 'SERTAD1', 'SETD2', 'SFN', 'SFRP1', 'SFRP2', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SIX2', 'SKP2', 'SLC30A8', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SNAI1', 'SNAI2', 'SNCA', 'SOCS1', 'SOX2', 'SP1', 'SPEN', 'SRC', 'STAT1', 'STAT3', 'STK11', 'STK25', 'STK33', 'STMN1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUV39H1', 'SUZ12', 'SYNE1', 'SYP', 'TBL1XR1', 'TBRG1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TERT', 'TET2', 'TFDP1', 'TFPI2', 'TGFBR2', 'THADA', 'THBS1', 'TIMP3', 'TMCO1', 'TMEM115', 'TNFRSF10B', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TRADD', 'TRIM28', 'TRIP12', 'PRSS58', 'TSC2', 'TSPAN8', 'TTF1', 'TWIST1', 'TWSG1', 'TYR', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2I', 'UBE3A', 'UCHL1', 'USP7', 'UTF1', 'VEGFA', 'VHL', 'WDTC1', 'WEE1', 'WFS1', 'WHSC1', 'WIF1', 'WRN', 'WT1', 'WWOX', 'XRCC1', 'YY1', 'ZBTB17', 'ZBTB7A', 'ZEB1', 'ZFP91', 'ZNF148', 'ZNF217', 'ZNF227', 'ZNF410', 'ZNF420', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 4.844077453727196e-15 NRMSE: 1.095077982079167e-15 MAPE: 3.8038830129664275e-12 Pearson Correlation: 0.1889757190247814 Spearman Correlation: 0.19850258511364746 Coefficient of Determination: -8.817156427273972 RMSE: 2.1100211372515014 NRMSE: 0.5700294838047064 MAPE: 3322.7747007530925 Predictor: ElasticNet Pearson Correlation: 0.49266622696407675 Spearman Correlation: 0.3279419190314548 Coefficient of Determination: 0.14612076615832736 RMSE: 0.6129678381830425 NRMSE: 0.13857077838432064 MAPE: 250.3591974944626 Pearson Correlation: 0.48364140700116254 Spearman Correlation: 0.35729197151497416 Coefficient of Determination: 0.14014427029391474 RMSE: 0.6244630488493667 NRMSE: 0.16870084526944204 MAPE: 216.6483519393682 Predictor: RandomForests Pearson Correlation: 0.6662250351297693 Spearman Correlation: 0.6056399506504265 Coefficient of Determination: 0.4270984004578826 RMSE: 0.5020875813412392 NRMSE: 0.11350459621142514 MAPE: 162.86817303453486 Pearson Correlation: 0.7130276466122182 Spearman Correlation: 0.6239098624524437 Coefficient of Determination: 0.4680405453297999 RMSE: 0.4911715647647899 NRMSE: 0.13269169136718983 MAPE: 142.80948292933763 Protein: TP53 Protein Interaction Partners Count: 1000 x_train_column_count: 991 x_train columns: ['ABCB1', 'ABCC1', 'ABL1', 'ACTB', 'ACTL6A', 'ADAM17', 'AFP', 'AGT', 'AICDA', 'AIFM2', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD2', 'ANXA1', 'ANXA2', 'ANXA5', 'APAF1', 'APBB1', 'APC', 'APEX1', 'APOBEC3B', 'APP', 'ARID1A', 'ARID3A', 'AR', 'ASF1A', 'ASXL1', 'ATF2', 'ATF3', 'ATG7', 'ATM', 'ATN1', 'ATRIP', 'ATRX', 'ATR', 'ATXN3', 'AURKA', 'AURKB', 'AXIN1', 'AXL', 'BACE1', 'BAG1', 'BAG2', 'BAIAP2L1', 'BAK1', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2A1', 'BCL2L11', 'BCL2L12', 'BCL2L14', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BID', 'BIRC3', 'BIRC5', 'BIRC6', 'BLM', 'BMF', 'BMI1', 'BMX', 'BNIP3L', 'BNIP3', 'BRCA1', 'BRCA2', 'BRCC3', 'BRD1', 'BRD4', 'BRD7', 'BRE', 'BRIP1', 'BRPF1', 'BRPF3', 'BTG2', 'BTK', 'BUB1B', 'BUB1', 'RHNO1', 'RGCC', 'RMI2', 'CNOT11', 'SETD9', 'CA9', 'CABIN1', 'CABLES1', 'CAPN1', 'CARM1', 'CASP10', 'CASP1', 'CASP2', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBX2', 'CBX4', 'CBX6', 'CBX8', 'CCDC106', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNG2', 'CCNH', 'CCNK', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CD24', 'CD274', 'CD34', 'CD40LG', 'CD40', 'CD44', 'CD82', 'CDC20', 'CDC25A', 'CDC25C', 'CDH17', 'CDH1', 'CDK12', 'CDK13', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CEACAM5', 'CEBPB', 'CENPJ', 'CFL1', 'CFLAR', 'CHD3', 'CHD4', 'CHD8', 'CHEK1', 'CHEK2', 'CHUK', 'CISH', 'CITED2', 'CLSPN', 'CLU', 'CNOT10', 'CNOT1', 'CNOT2', 'CNOT3', 'CNOT4', 'CNOT6L', 'CNOT6', 'CNOT7', 'CNOT8', 'COPS5', 'CREB1', 'CREBBP', 'CRYAB', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK1G1', 'CSNK1G2', 'CSNK1G3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTCF', 'CTGF', 'CTNNB1', 'CUL4A', 'CUL7', 'CUL9', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP1A1', 'DACH1', 'DAPK1', 'DAP', 'DAXX', 'DDB1', 'DDB2', 'DDIT4', 'DDX17', 'DDX3X', 'DDX5', 'DECR1', 'DGCR8', 'DHCR24', 'DHFR', 'DIABLO', 'DICER1', 'DKK1', 'DMTF1', 'DNA2', 'DNAJA3', 'DNAJB1', 'DNMT1', 'DNMT3A', 'DNTT', 'DPYD', 'DRAM1', 'DTL', 'DUSP1', 'DUSP2', 'DYRK1A', 'DYRK2', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EEF1A1', 'EEF1A2', 'EGFR', 'EGF', 'EGR1', 'EHMT1', 'EHMT2', 'EI24', 'EIF2AK2', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4EBP1', 'ELANE', 'ELAVL1', 'ELL3', 'ELL', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHA3', 'EPHB2', 'ERBB2', 'ERBB4', 'ERCC1', 'ERCC2', 'ERCC3', 'ERCC6', 'ESR1', 'ETS1', 'ETS2', 'EWSR1', 'EXO1', 'EZH2', 'F2', 'FADD', 'AMER1', 'FAM175B', 'FANCC', 'FANCD2', 'FASLG', 'FAS', 'FBL', 'FBXO11', 'FBXO4', 'FBXW7', 'FGF1', 'FGF2', 'FGFR3', 'FHIT', 'FHL2', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FSCN1', 'FUT4', 'FZR1', 'G3BP1', 'G6PD', 'GADD45A', 'GADD45B', 'GADD45G', 'GAPDH', 'GATAD2A', 'GATAD2B', 'GDF15', 'GFI1', 'GLS2', 'GLTSCR2', 'GNL3', 'GRAMD4', 'GRB10', 'GRB14', 'GSK3B', 'GSTP1', 'GTF2H1', 'GTSE1', 'H1F0', 'H2AFX', 'HAMP', 'HCK', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC5', 'HDAC7', 'HDAC8', 'HDAC9', 'HERC5', 'HIC1', 'HIF1A', 'HIPK1', 'HIPK2', 'HIPK3', 'HIPK4', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HK2', 'HMGA1', 'HMGA2', 'HMGB1', 'HMGB2', 'HMMR', 'HMOX1', 'HNF4A', 'HNRNPK', 'HNRNPL', 'HOXA5', 'HPGDS', 'HRAS', 'HSF1', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA1A', 'HSPA1B', 'HSPA1L', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'HSPB1', 'HSPB2', 'HTT', 'HUS1', 'HUWE1', 'ICAM1', 'ID2', 'ID4', 'IDH1', 'IDH2', 'IFI16', 'IFNAR1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IGFBP7', 'IKBKB', 'IL17A', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING2', 'ING3', 'ING4', 'ING5', 'INSIG1', 'INS', 'IRF1', 'ISG15', 'ITPKB', 'JAG1', 'JAK2', 'JMY', 'JUN', 'KAT2A', 'KAT2B', 'KAT5', 'KDM1A', 'KDM6A', 'KDM6B', 'KDR', 'KHDRBS1', 'CCAR2', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KPNA2', 'KRAS', 'KRT14', 'KRT17', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'L3MBTL1', 'LAMA4', 'LEP', 'LGALS7B', 'LGALS7', 'LIF', 'LIG4', 'LIN28A', 'PIDD1', 'LRRK2', 'LYN', 'MAF1', 'MAF', 'MAGEA2', 'MAP1LC3B', 'MAP2K1', 'MAP2K3', 'MAP2K7', 'MAP3K1', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MBD3', 'MCL1', 'MCM7', 'MDC1', 'MDH1', 'MDM2', 'MDM4', 'MEAF6', 'MECOM', 'MELK', 'MET', 'MGMT', 'MIF', 'MKI67', 'MKRN1', 'MLH1', 'KMT2D', 'KMT2C', 'MMP13', 'MMP1', 'MMP2', 'MMP9', 'MOV10', 'MRE11A', 'MSH2', 'MSH6', 'MSX1', 'MT1A', 'MT2A', 'MTA1', 'MTA2', 'MTA3', 'MTOR', 'MUC1', 'MUTYH', 'MYBBP1A', 'MYB', 'MYCN', 'MYC', 'MYOCD', 'KAT8', 'KAT6A', 'NANOG', 'NBN', 'NCL', 'NCOA3', 'NCOR1', 'NCOR2', 'NDN', 'NDRG1', 'NEDD8', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFE2L2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NFKBIB', 'NFYA', 'NFYB', 'NFYC', 'NGFR', 'NKX2-1', 'NLK', 'NLRC4', 'NME1', 'NOC2L', 'NOS3', 'NOTCH1', 'NOTCH3', 'NOTCH4', 'NOX4', 'NPM1', 'NQO1', 'NR1I2', 'NR2E1', 'NR3C1', 'NR4A1', 'NR4A2', 'NRAS', 'NUAK1', 'NUMB', 'NUPR1', 'OGG1', 'OLIG2', 'OPN1SW', 'OSGIN1', 'OTUB1', 'OTUB2', 'OTUD5', 'PADI4', 'PALB2', 'PARK2', 'PARK7', 'PARP1', 'PATZ1', 'PAX2', 'PAX3', 'PAX8', 'PBK', 'PBRM1', 'PCBP4', 'PCNA', 'PDCD4', 'PDCD5', 'PDGFRA', 'PDGFRB', 'PDLIM7', 'PER2', 'PERP', 'PGR', 'PHB', 'PHC1', 'PHC2', 'PHC3', 'PHF20', 'PHGDH', 'PI3', 'PIAS1', 'PIAS2', 'PIAS4', 'PIK3CA', 'PIN1', 'PKM', 'PLAGL1', 'PLAU', 'PLK1', 'PLK2', 'PLK3', 'PLK4', 'PMAIP1', 'PML', 'PMS2', 'POLI', 'POLK', 'POU4F1', 'POU4F2', 'POU5F1', 'PPARGC1A', 'PPARG', 'PPIF', 'PPM1D', 'PPP1R13B', 'PPP1R13L', 'PPP1R15A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R4', 'PPP2R5C', 'PRDM1', 'PRDM2', 'PRDX1', 'PRELID1', 'PRIMA1', 'PRKAA1', 'PRKAA2', 'PRKAB1', 'PRKAB2', 'PRKAG1', 'PRKAG2', 'PRKAG3', 'PRKCA', 'PRKCD', 'PRKCZ', 'PRKD1', 'PRKDC', 'PRKG1', 'PRMT1', 'PRMT5', 'PROM1', 'PSEN1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTBP1', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2', 'PTTG1', 'RABGGTA', 'RABGGTB', 'RAD17', 'RAD1', 'RAD50', 'RAD51', 'RAD9A', 'RAD9B', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP4', 'RBBP6', 'RBBP7', 'RBBP8', 'RBL1', 'RBL2', 'RBM38', 'RBPJ', 'RCHY1', 'RCOR1', 'RECQL4', 'RELA', 'REM1', 'REST', 'RET', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RFFL', 'RFWD2', 'RING1', 'RMI1', 'DROSHA', 'RNF20', 'RNF2', 'RNF34', 'RNF43', 'ROCK1', 'RPA1', 'RPA2', 'RPA3', 'RPL11', 'RPL22', 'RPL26', 'RPL5', 'RPRM', 'RPS14', 'RPS19', 'RPS27A', 'RPS27L', 'RPS3', 'RPS6KB1', 'RQCD1', 'RRAD', 'RRM2B', 'RRM2', 'RUNX2', 'RUNX3', 'S100A2', 'S100A4', 'S100A6', 'S100B', 'SALL4', 'SCO2', 'SDHC', 'SENP1', 'SENP3', 'SERPINB5', 'SERPINE1', 'SESN1', 'SESN2', 'SESN3', 'SETD2', 'SETD7', 'SETD8', 'SETDB1', 'SFN', 'SRSF1', 'SGK1', 'SHFM1', 'SHH', 'SHISA5', 'SIK1', 'SIN3A', 'SIN3B', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SKP2', 'SLC2A14', 'SLC2A1', 'SLC2A2', 'SLC2A3', 'SLC6A6', 'SLMO1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMG1', 'SMG7', 'SMYD2', 'SNAI1', 'SNAI2', 'SOCS1', 'SOCS3', 'SOD2', 'SORT1', 'SOX2', 'SOX4', 'SP100', 'SP1', 'SP3', 'SP7', 'SPATA18', 'SPP1', 'SQSTM1', 'SRC', 'SREBF1', 'SREBF2', 'SSRP1', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STEAP3', 'STK11', 'STMN1', 'STUB1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUMO4', 'SUPT16H', 'SUV39H1', 'SUZ12', 'SYK', 'SYP', 'TADA3', 'TAF10', 'TAF11', 'TAF12', 'TAF13', 'TAF15', 'TAF1L', 'TAF1', 'TAF2', 'TAF3', 'TAF4B', 'TAF4', 'TAF5', 'TAF6', 'TAF7L', 'TAF7', 'TAF9B', 'TBPL1', 'TBPL2', 'TBP', 'TCHP', 'TCP1', 'TDG', 'TERT', 'TET2', 'TFAM', 'TFAP2A', 'TFAP2C', 'TFDP1', 'TFF1', 'TGFB1', 'TGM2', 'THBS1', 'TIMP3', 'TLR3', 'TLR9', 'TMEM219', 'TNFAIP3', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF10C', 'TNFRSF10D', 'TNF', 'TNK2', 'TNKS1BP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOE1', 'TOP1', 'TOP2A', 'TOP3A', 'TOPBP1', 'TOPORS', 'TP53AIP1', 'TP53BP1', 'TP53BP2', 'TP53I3', 'TP53INP1', 'TP53RK', 'TP63', 'TP73', 'TPT1', 'TPX2', 'TRAF6', 'TRIAP1', 'TRIM24', 'TRIM28', 'TRIM29', 'TRIM32', 'TRIM59', 'TRIM8', 'TRRAP', 'TSC2', 'TTC5', 'TTK', 'TWIST1', 'TWIST2', 'TXN', 'TYMS', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2D1', 'UBE2E1', 'UBE2I', 'UBE2K', 'UBE2N', 'UBE2Q1', 'UBE2S', 'UBE3A', 'UBN1', 'UCHL1', 'UHRF1', 'USF1', 'USP10', 'USP15', 'USP24', 'USP3', 'USP42', 'USP7', 'UTP14A', 'VEGFA', 'VHL', 'VPRBP', 'VRK1', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WWOX', 'XAF1', 'XIAP', 'XPA', 'XPO1', 'XRCC1', 'XRCC5', 'XRCC6', 'YBX1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'YY1', 'YY2', 'ZBTB33', 'ZBTB7A', 'ZEB1', 'ZEB2', 'ZKSCAN4', 'ZNF148', 'ZNF274', 'ZNF385A', 'ZNF420', 'ZNF668', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.962619298676044e-15 NRMSE: 5.256781300859901e-16 MAPE: 2.2485250540154516e-12 Pearson Correlation: 0.25722870987524554 Spearman Correlation: 0.156301824212272 Coefficient of Determination: -1.1183208335609653 RMSE: 0.5958352432743499 NRMSE: 0.19622435148175527 MAPE: 5684.564676891127 Predictor: ElasticNet Pearson Correlation: 0.44858804137550845 Spearman Correlation: 0.4480592777644782 Coefficient of Determination: 0.16414356236441108 RMSE: 0.41627926713420504 NRMSE: 0.11149839751820144 MAPE: 323.5050896068551 Pearson Correlation: 0.4016841723838468 Spearman Correlation: 0.3832357818749391 Coefficient of Determination: 0.13897616577640637 RMSE: 0.3798725445332356 NRMSE: 0.12510210588942386 MAPE: 1665.3439421925789 Predictor: RandomForests Pearson Correlation: 0.6760856663874204 Spearman Correlation: 0.5828389256744891 Coefficient of Determination: 0.3816544637315291 RMSE: 0.35804247493664515 NRMSE: 0.09589995311012325 MAPE: 342.13075090349093 Pearson Correlation: 0.6064388444662423 Spearman Correlation: 0.4688340241252622 Coefficient of Determination: 0.29913669860842074 RMSE: 0.3427259422941701 NRMSE: 0.11286874437482959 MAPE: 1906.2089208927212 Protein: CTNNB1 Protein Interaction Partners Count: 992 x_train_column_count: 984 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACAN', 'ACP1', 'ACTA1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTN4', 'ACVR1B', 'ACVR1', 'ADAM10', 'ADCY7', 'ADIPOQ', 'AES', 'AFP', 'AHI1', 'AHR', 'AHSA1', 'AJAP1', 'AK9', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'ALPL', 'AMHR2', 'AMH', 'ANXA5', 'AP1M1', 'APC2', 'APCS', 'APC', 'APH1A', 'APH1B', 'AQP1', 'ARHGAP10', 'ARHGAP21', 'ARHGAP32', 'ARHGEF4', 'ARID1A', 'ARID2', 'ARMC7', 'ARMC8', 'ARVCF', 'ARX', 'AR', 'ASCL1', 'ASF1A', 'ASH2L', 'ASIP', 'ATF4', 'ATM', 'AURKA', 'AXIN1', 'AXIN2', 'BAG3', 'BCAR1', 'BCL2L1', 'BCL3', 'BCL6', 'BCL9L', 'BCL9', 'BDNF', 'BGLAP', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BMPR1B', 'BNIP2', 'BRAF', 'BRCA1', 'BRCA2', 'BRMS1L', 'BTRC', 'HILPDA', 'AK8', 'CA2', 'CA9', 'CABLES1', 'CACYBP', 'CALM1', 'CALM3', 'CARM1', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBLL1', 'CBL', 'CBY1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CD24', 'CD34', 'CD40', 'CD44', 'CDC27', 'CDC42', 'CDC73', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH16', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH26', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDHR5', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK8', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDON', 'CDX1', 'CDX2', 'CEBPA', 'CHD8', 'CHRD', 'CHUK', 'CITED1', 'CKAP5', 'CLCA1', 'CLDN3', 'CLDN5', 'COL1A1', 'COPS3', 'COPS5', 'COPS6', 'CREB1', 'CREBBP', 'CRKL', 'CRK', 'CRP', 'CRYAB', 'CSNK1A1L', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK2A3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNAL1', 'CTNNBIP1', 'CTNND1', 'CTNND2', 'CTTN', 'CUL1', 'CUL4A', 'CUL4B', 'CXCR4', 'CXXC4', 'DAB2', 'DACT1', 'DACT2', 'DACT3', 'DCT', 'DCX', 'DDB1', 'DDX39A', 'DDX3X', 'DDX5', 'DHODH', 'DHX9', 'DKK1', 'DKK2', 'DKK3', 'DKK4', 'DLG1', 'DLG2', 'DLG4', 'DLG5', 'DLGAP1', 'DLL4', 'DLX1', 'DNM2', 'DNMT1', 'DPYD', 'DSC1', 'DSC2', 'DSC3', 'DSG1', 'DSG2', 'DSG3', 'DSG4', 'DSP', 'DUSP6', 'DVL1', 'DVL2', 'DVL3', 'E2F3', 'ECM1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'ELAVL1', 'EMD', 'ENAH', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHB2', 'EPHB3', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EXOC3', 'EXOC4', 'EYA4', 'EZH2', 'EZR', 'F2RL2', 'FAF1', 'AMER1', 'FANCA', 'FASLG', 'FAS', 'FAT1', 'FAT4', 'FBXW11', 'FBXW7', 'FERMT2', 'FER', 'FGF10', 'FGF13', 'FGF2', 'FGF3', 'FGF4', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FLT3', 'FMN1', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC2', 'FOXG1', 'FOXL1', 'FOXL2', 'FOXM1', 'FOXN3', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FRAT1', 'FRAT2', 'FRZB', 'FSCN1', 'FSTL1', 'FSTL3', 'FURIN', 'FUS', 'FXR1', 'FYN', 'FZD10', 'FZD1', 'FZD2', 'FZD3', 'FZD4', 'FZD5', 'FZD6', 'FZD7', 'FZD8', 'FZD9', 'GAPDH', 'GATA2', 'GATA4', 'GCG', 'GDF2', 'GDNF', 'GFRA1', 'GJA1', 'GLI1', 'GLI2', 'GLI3', 'GLIS2', 'GLUL', 'GNA11', 'GNA12', 'GNA13', 'GNAQ', 'GNAS', 'GPC3', 'GRIA2', 'GRIP1', 'GSK3A', 'GSK3B', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HAS2', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC7', 'HERC5', 'HES7', 'HGF', 'HGS', 'HHEX', 'HIC1', 'HIF1A', 'HINT1', 'HIPK2', 'HIST1H1C', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HMGB1', 'HNF1A', 'HNF4A', 'HNRNPA1', 'HNRNPA2B1', 'HNRNPK', 'HNRNPM', 'HOXA10', 'HOXB4', 'HPGD', 'HRAS', 'HSP90AB1', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPD1', 'HTRA1', 'HTT', 'HUWE1', 'IBSP', 'IDH1', 'IDH2', 'IFNB1', 'IFRD1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP4', 'IHH', 'IKBKB', 'IL6', 'CXCL8', 'ILK', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IRF3', 'ISG15', 'ISL1', 'ITGAE', 'ITGB1', 'ITGB7', 'ITK', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'AJUBA', 'JUN', 'JUP', 'KANK1', 'KAT2A', 'KAT2B', 'KAT5', 'KCNN1', 'KCTD1', 'KDM1A', 'KDR', 'KIF18B', 'KIF3A', 'KIF5B', 'KIFC3', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KRAS', 'KREMEN1', 'KRIT1', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LATS2', 'LDB1', 'LDHB', 'LDLR', 'LEF1', 'LEO1', 'LGR4', 'LGR5', 'LGR6', 'LHCGR', 'LHX8', 'LIF', 'LIMA1', 'LMNA', 'LMNB1', 'LOX', 'LRP4', 'LRP5L', 'LRP5', 'LRP6', 'LRRFIP1', 'LRRK2', 'LZTFL1', 'MACF1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8IP1', 'MAPK8', 'MAPK9', 'MDFIC', 'MDFI', 'MDK', 'MDM2', 'MED12', 'MED1', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'KMT2D', 'MLLT10', 'MLLT11', 'MLLT4', 'MLLT6', 'KMT2A', 'MME', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP25', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MRAP', 'MSH2', 'MSH6', 'MSN', 'MSX1', 'MSX2', 'MTDH', 'MTOR', 'MUC13', 'MUC1', 'MUTYH', 'MYCN', 'MYC', 'MYF5', 'MYO1D', 'MYO6', 'MYO7A', 'MYOD1', 'MYOG', 'NANOG', 'NCAM1', 'NCCRP1', 'NCOA2', 'NCSTN', 'NDP', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEURL2', 'NF1', 'NF2', 'NFAT5', 'NFKB1', 'NIT1', 'NKD1', 'NKX2-5', 'NLK', 'NME1', 'NOG', 'NONO', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR0B1', 'NR4A1', 'NR4A2', 'NR5A1', 'NR5A2', 'NRAS', 'NRIP1', 'NTRK1', 'NTRK2', 'NTRK3', 'NUDT5', 'NUMB', 'NUP153', 'NUTF2', 'OTX2', 'PAK1', 'PAK2', 'PAK3', 'PANK4', 'PARD3', 'PARD6A', 'PARK2', 'PARP1', 'PAX3', 'PAX6', 'PAX7', 'PAX8', 'PDGFRA', 'PDGFRB', 'PECAM1', 'PGK1', 'PGR', 'PHB', 'JADE1', 'PI3', 'PICK1', 'PIK3CA', 'PIK3R1', 'PIK3R2', 'PIN1', 'PIP5K1A', 'PIP5K1C', 'PITX2', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAG1', 'PLEKHA7', 'PLK1', 'PML', 'PMS2', 'POLE', 'PORCN', 'POTEF', 'POU5F1', 'PPARD', 'PPARG', 'PPM1A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R2B', 'PPP2R5A', 'PPP2R5B', 'PPP2R5C', 'PPP2R5D', 'PPP2R5E', 'PRKACA', 'PRKACB', 'PRKACG', 'PRKAR1A', 'PRKCA', 'PRKCG', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRL', 'PRMT1', 'PROC', 'PROM1', 'PROP1', 'PSEN1', 'PSEN2', 'PSENEN', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTEN', 'PTGES3', 'PTGS2', 'PTH1R', 'PTH', 'PTK2', 'PTK7', 'PTMA', 'PTN', 'PTPN11', 'PTPN13', 'PTPN1', 'PTPN6', 'PTPRB', 'PTPRC', 'PTPRF', 'PTPRG', 'PTPRJ', 'PTPRK', 'PTPRM', 'PTPRU', 'PTPRZ1', 'PVRL1', 'PVRL2', 'PXN', 'PYGO1', 'PYGO2', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RALGDS', 'RANBP3', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RAPGEF2', 'RAPGEF6', 'RAPSN', 'RARA', 'RARB', 'RARG', 'RARS', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP5', 'RBMX', 'RBPJ', 'RBX1', 'RELA', 'REM1', 'RET', 'RHOA', 'RIPK2', 'RNF220', 'RNF43', 'ROBO1', 'ROCK1', 'ROCK2', 'ROR2', 'RPRD1A', 'RPS27A', 'RPSA', 'RSPO1', 'RSPO2', 'RSPO3', 'RSPO4', 'RUNX2', 'RUNX3', 'RUVBL1', 'RUVBL2', 'RXRA', 'RYK', 'S100A4', 'S100A6', 'SALL1', 'SALL4', 'SATB1', 'SCRIB', 'SDHC', 'SERPINE1', 'SETD2', 'SETD7', 'SFN', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHFM1', 'SHH', 'SIAH1', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT6', 'SKP1', 'SLC6A3', 'SLC9A3R1', 'SLCO1B3', 'SLCO2A1', 'SLIT1', 'SLK', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD5', 'SMAD7', 'SMAD9', 'SMARCA2', 'SMARCA4', 'SMARCA5', 'SMARCB1', 'SMO', 'SMURF1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNX1', 'SOST', 'SOX10', 'SOX13', 'SOX17', 'SOX1', 'SOX2', 'SOX3', 'SOX4', 'SOX6', 'SOX7', 'SOX8', 'SOX9', 'SP1', 'SP7', 'SPAG9', 'SPATA13', 'SPEN', 'SPN', 'SPP1', 'SRC', 'STAT3', 'STK11', 'STRAP', 'STX4', 'SUFU', 'SUV39H1', 'SYP', 'TADA3', 'TAX1BP3', 'TAZ', 'TBL1XR1', 'TBL1X', 'TBX5', 'TBX6', 'TCF12', 'TCF3', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TFAP2A', 'TFCP2', 'TFF1', 'TFF2', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBR1', 'TGFBR2', 'TGM2', 'TJP1', 'TJP2', 'TLE1', 'TLE2', 'TLE3', 'TLE4', 'TNFRSF11B', 'TNFSF11', 'TNF', 'TNIK', 'TNKS2', 'TNKS', 'TNS1', 'TOB1', 'TOP2A', 'TP53', 'TRAF4', 'TRIM33', 'TRIM37', 'TRIP10', 'TRRAP', 'TSC2', 'TUBA1A', 'TWIST1', 'TYMS', 'T', 'UBA52', 'UBB', 'UBC', 'UBE2B', 'UBE2R2', 'UBE3A', 'UBR5', 'UCHL1', 'UMPS', 'UPRT', 'USP4', 'USP7', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VAV2', 'VAV3', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VHL', 'VIM', 'WDR64', 'WDTC1', 'WHSC1', 'WIF1', 'WISP1', 'WLS', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'WWTR1', 'XPO1', 'YAP1', 'YARS', 'YEATS4', 'YES1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'ZAP70', 'ZAR1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZIC3', 'ZNRF3', 'ZYX', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 3.035276377164293e-15 NRMSE: 5.970252512124888e-16 MAPE: 6.110152691638068e-12 Pearson Correlation: 0.3113400726849949 Spearman Correlation: 0.332962637791435 Coefficient of Determination: -1.647591283441233 RMSE: 1.2472600349749365 NRMSE: 0.3104104016761496 MAPE: 637.2264104499475 Predictor: ElasticNet Pearson Correlation: 0.5089438785959789 Spearman Correlation: 0.477230123545008 Coefficient of Determination: 0.1424418765711516 RMSE: 0.6713669486351996 NRMSE: 0.13205486794555463 MAPE: 658.3898385321957 Pearson Correlation: 0.4682804353751667 Spearman Correlation: 0.49780509218612823 Coefficient of Determination: 0.021507835938939235 RMSE: 0.7582461459545281 NRMSE: 0.18870763444277847 MAPE: 260.6779495193148 Predictor: RandomForests Pearson Correlation: 0.6752394208716751 Spearman Correlation: 0.6306516450727567 Coefficient of Determination: 0.4446434237391931 RMSE: 0.5402740818718719 NRMSE: 0.10626948895984892 MAPE: 418.6490648898317 Pearson Correlation: 0.5555587642331372 Spearman Correlation: 0.5261633011413521 Coefficient of Determination: 0.26095443840487087 RMSE: 0.6589722737741187 NRMSE: 0.16400096408106288 MAPE: 185.54982769552925 Protein: CCNE1 Protein Interaction Partners Count: 350 x_train_column_count: 347 x_train columns: ['ABL1', 'AKT1', 'AKT2', 'AKT3', 'ALDH18A1', 'ANAPC10', 'ANAPC13', 'ANAPC1', 'ANAPC2', 'ANAPC4', 'ANAPC5', 'ANAPC7', 'ANXA5', 'ARID1A', 'AR', 'ATM', 'AURKA', 'AURKB', 'BARD1', 'BCL2L1', 'BIRC5', 'BRCA1', 'BRCA2', 'BTG2', 'BTRC', 'BUB1B', 'BUB1', 'BUB3', 'RGCC', 'MLIP', 'CABLES1', 'CALM1', 'CAPRIN1', 'CASP3', 'CASP9', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNF', 'CCNG1', 'CCNH', 'CCNK', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CDC16', 'CDC20', 'CDC23', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC26', 'CDC27', 'CDC45', 'CDC6', 'CDC7', 'CDCA2', 'CDCA5', 'CDCA8', 'CDH1', 'CDK12', 'CDK13', 'CDK14', 'CDK15', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CENPA', 'CENPE', 'CHAF1A', 'CHD1L', 'CHEK1', 'CHEK2', 'CINP', 'CKS1B', 'CKS2', 'COPS5', 'CREBBP', 'CSK', 'CTNNB1', 'CUL1', 'CUL3', 'CUL4B', 'DBF4B', 'DBF4', 'DGCR8', 'DICER1', 'DTL', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'EBNA1BP2', 'ECT2', 'EGFR', 'EGF', 'ELAVL1', 'ELSPBP1', 'EP400', 'ERBB2', 'ERBB3', 'ERBB4', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM58A', 'FAM83H', 'FBXO5', 'FBXW7', 'FEN1', 'FGFR1', 'FGFR2', 'FGFR3', 'FOXM1', 'FZR1', 'GAPDH', 'GLI1', 'GMNN', 'GSK3B', 'H1F0', 'HDAC1', 'HEATR3', 'HERC5', 'HIST1H1A', 'HIST1H1B', 'HIST1H4A', 'HRAS', 'IFNAR1', 'IGF1R', 'IGF1', 'ITPKB', 'JUN', 'KIF11', 'KIF20A', 'KIF23', 'KIF2C', 'KPNA2', 'KRAS', 'LATS2', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'GMNC', 'MAD2L1', 'MAPK3', 'MATK', 'MAX', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDM2', 'MEGF11', 'MELK', 'MKI67', 'KMT2D', 'KMT2B', 'MNAT1', 'MRE11A', 'MTOR', 'MYBL2', 'MYC', 'NBN', 'NF1', 'NFYB', 'NMI', 'NOTCH1', 'NOTCH3', 'NPAT', 'NRAS', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PARK2', 'PARP1', 'PCBP4', 'PCNA', 'PIK3CA', 'PIK3R1', 'PKMYT1', 'PLK1', 'PLK4', 'POLA1', 'POLD1', 'PPP1R1C', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R4', 'PRC1', 'PRKAR1A', 'PRKAR2A', 'PRMT5', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB10', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSMF1', 'PTEN', 'PTGDR', 'PTK6', 'PTTG1', 'RAD51', 'RAD54L', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RBX1', 'REL', 'REM1', 'RHOA', 'RHOBTB3', 'RINT1', 'RNASE1', 'RPRD1A', 'RPS27A', 'RRM1', 'RRM2', 'RRN3', 'RSF1', 'SHFM1', 'SKP1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'ST8SIA1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STK3', 'STK4', 'TARBP1', 'TCP1', 'TERF1', 'TERT', 'TFDP1', 'TK1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TPX2', 'TTK', 'TUBG1', 'TYMS', 'UBA52', 'UBB', 'UBC', 'UBE2C', 'UBE2QL1', 'UBE2S', 'UHRF2', 'WEE1', 'WEE2', 'XIAP', 'YAP1', 'ZNF217', 'ZNF33A', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.9601705041265894 Spearman Correlation: 0.8730487935079695 Coefficient of Determination: 0.9219273969947087 RMSE: 0.14328301370685326 NRMSE: 0.03457852009239406 MAPE: 34.501113164657106 Pearson Correlation: 0.565113156602193 Spearman Correlation: 0.41849575651155985 Coefficient of Determination: -1.5978149933863177 RMSE: 0.6741620141325236 NRMSE: 0.36639439025892734 MAPE: 80.27247289098786 Predictor: ElasticNet Pearson Correlation: 0.6702550719488771 Spearman Correlation: 0.582105449486671 Coefficient of Determination: 0.3659231055144212 RMSE: 0.4083347510816142 NRMSE: 0.0985435120982731 MAPE: 82.16150683351083 Pearson Correlation: 0.7186193183380466 Spearman Correlation: 0.6266998341625208 Coefficient of Determination: 0.4534773877002276 RMSE: 0.30921762251203105 NRMSE: 0.16805396904984868 MAPE: 53.656744305306646 Predictor: RandomForests Pearson Correlation: 0.8617928485205313 Spearman Correlation: 0.7113946304957038 Coefficient of Determination: 0.7370044408538277 RMSE: 0.26297810132597776 NRMSE: 0.06346456097834731 MAPE: 68.09589031787966 Pearson Correlation: 0.834994290849563 Spearman Correlation: 0.7370695400035787 Coefficient of Determination: 0.694368986127278 RMSE: 0.23123782722461025 NRMSE: 0.12567341519497946 MAPE: 40.89069492026417 Protein: CCND1 Protein Interaction Partners Count: 857 x_train_column_count: 849 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTL6B', 'AFP', 'AHR', 'AKAP12', 'AKAP8', 'AKR1B10', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDOA', 'ALK', 'ANO1', 'ANXA5', 'APAF1', 'APC', 'APEX1', 'AREG', 'ARHGEF2', 'ARID1A', 'ARID1B', 'ARID2', 'ARID4A', 'AR', 'ASIP', 'ATF2', 'ATF3', 'ATF4', 'ATM', 'ATXN1', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'B2M', 'BANP', 'BARX2', 'BAX', 'BCAR1', 'BCAR3', 'BCCIP', 'BCL2A1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL3', 'BCL6', 'BCL9', 'BECN1', 'BGLAP', 'BHLHE40', 'BIRC2', 'BIRC3', 'BIRC5', 'BMI1', 'BMP4', 'BMP6', 'BRAF', 'BRCA1', 'BRCA2', 'BRD2', 'BRD4', 'BTC', 'BTG2', 'BTRC', 'RGCC', 'COPRS', 'CA9', 'CARD11', 'CARM1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBFB', 'CCDC62', 'CCL2', 'CCL5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNC', 'CCND2', 'CCND3', 'CCNDBP1', 'CCNE1', 'CCNE2', 'CCNG2', 'CCNH', 'CCNK', 'CCNL1', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CD19', 'CD22', 'CD24', 'CD34', 'CD38', 'CD44', 'CD5', 'CD79A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC6', 'CDC73', 'CDCA7L', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK12', 'CDK13', 'CDK14', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK20', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CDX2', 'CENPE', 'CEP57', 'CFLAR', 'CHEK1', 'CHEK2', 'CHKA', 'CHUK', 'CKS1B', 'CKS2', 'CLCN3', 'COL1A1', 'CR2', 'CREB1', 'CREBBP', 'CRKL', 'CRYAB', 'CSF2', 'CTBP1', 'CTGF', 'CTNNB1', 'CTNND1', 'CTTN', 'CUL1', 'CUL3', 'CUL7', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'CYR61', 'DACH1', 'DAXX', 'DDIT3', 'DDX53', 'DECR1', 'DHFR', 'DICER1', 'DKK1', 'DKK3', 'DLL1', 'DMTF1', 'DND1', 'DNMT1', 'DNMT3A', 'DNTT', 'DVL1', 'DVL2', 'DYRK1A', 'DYRK1B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EDN1', 'EEF1A1', 'EGFR', 'EGF', 'EGLN2', 'EGR1', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF3I', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4E', 'EIF4G1', 'ELAVL1', 'ELSPBP1', 'EP300', 'EPCAM', 'EPHA2', 'EPHA7', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EWSR1', 'EYA1', 'EZH2', 'FABP4', 'FADD', 'FAM58A', 'FAM83H', 'FASLG', 'FAT1', 'FBXO31', 'FBXO4', 'FBXW7', 'FBXW8', 'FGF13', 'FGF19', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FHL2', 'FIGF', 'FLCN', 'FLNA', 'FLT1', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXC1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FRZB', 'FSTL3', 'FZD1', 'FZD2', 'FZD7', 'FZD9', 'FZR1', 'GADD45A', 'GAL', 'GAPDH', 'GAST', 'GATA3', 'GATA4', 'GDF15', 'GDF2', 'GGNBP2', 'GGT1', 'GIT1', 'GJA1', 'GJB1', 'GLI1', 'GLI2', 'GLI3', 'GLTSCR2', 'GNB2L1', 'GPER1', 'GRB2', 'GREB1', 'GRM4', 'GRP', 'GSK3B', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HBEGF', 'HBZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC4', 'HEXIM1', 'HEY1', 'HGF', 'HIF1A', 'HIST1H2AA', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AH', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AC', 'HIST2H2BE', 'HIST2H4A', 'HIST4H4', 'HMGA2', 'HMOX1', 'HNF1A', 'HNF4A', 'HNRNPD', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB8', 'ICAM1', 'ID1', 'ID2', 'IFNAR1', 'IFNB1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP3', 'IGFBP5', 'IHH', 'IKBKB', 'IL10', 'IL17A', 'IL2', 'IL4', 'IL6', 'IL7', 'CXCL8', 'ILK', 'INSM1', 'INS', 'IRF1', 'IRS1', 'ISG15', 'ITGB1', 'ITPKB', 'ITPKC', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUNB', 'JUND', 'JUN', 'KAT2A', 'KAT2B', 'KDM1A', 'KDM5B', 'KDR', 'KHDRBS1', 'KIF18B', 'KIN', 'KITLG', 'KIT', 'KLF13', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KRAS', 'KRT10', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LDB3', 'LEF1', 'LEP', 'LGALS3', 'LGR5', 'LIMK2', 'LIMS1', 'LIN28B', 'LMNA', 'LMNB1', 'LOX', 'LRP5', 'LRP6', 'LYN', 'MAFB', 'MAF', 'MAML1', 'MAML2', 'MAML3', 'MAMLD1', 'MAP2K1', 'MAP2K2', 'MAP2K4', 'MAP2K7', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDK', 'MDM2', 'MDM4', 'MEN1', 'MET', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'MLXIPL', 'MME', 'MMP11', 'MMP14', 'MMP15', 'MMP1', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MNAT1', 'MOV10', 'MSH2', 'MST1', 'MTOR', 'MUC1', 'MYBL2', 'MYB', 'MYCN', 'MYC', 'MYEOV', 'MYF5', 'MYOD1', 'MYOG', 'NACA2', 'NADSYN1', 'NANOG', 'NCAM1', 'NCOA1', 'NCOA3', 'NCOR1', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NGF', 'NKX2-1', 'NME1-NME2', 'NME1', 'NME2', 'NMI', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NQO1', 'NR0B2', 'NR1H3', 'NR2E1', 'NR3C1', 'NR4A3', 'NRAS', 'NRF1', 'NUDT21', 'ODC1', 'ORAI1', 'ORAOV1', 'ORC4', 'PAK1', 'PAK4', 'PARK2', 'PARP1', 'PAX2', 'PAX5', 'PAX6', 'PBRM1', 'PBX3', 'PCNA', 'PDCD4', 'PDGFRA', 'PDGFRB', 'PDZK1', 'PECAM1', 'PELP1', 'PGR', 'PI3', 'PI4K2A', 'PIK3CA', 'PIK3R1', 'PKLR', 'PKM', 'PLAUR', 'PLAU', 'PLK1', 'PMAIP1', 'POLR2A', 'POTEF', 'POU2F1', 'POU5F1', 'PPARG', 'PPP2R4', 'PRDM5', 'PRKACA', 'PRL', 'PRMT5', 'PRNP', 'PROM1', 'PSAT1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTCHD3', 'PTEN', 'PTF1A', 'PTGS2', 'PTHLH', 'PTH', 'PTK2', 'PTK6', 'PTPN11', 'PTPRCAP', 'PTPRC', 'PXN', 'RAD51', 'RAF1', 'RALA', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RBX1', 'RCC1', 'RELA', 'RELB', 'REL', 'REM1', 'RET', 'RHEB', 'RHOA', 'RHOC', 'RICTOR', 'RNASE1', 'DROSHA', 'RND3', 'RNMT', 'ROCK1', 'RPRD1B', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KA6', 'RPS6KB1', 'RPS6', 'RPTOR', 'RREB1', 'RSF1', 'RUNX1', 'RUNX2', 'RUNX3', 'SDC1', 'SDHC', 'SENP1', 'SERPINE1', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHC1', 'SHFM1', 'SHH', 'SIRT1', 'SIX1', 'SIX3', 'SKP1', 'SKP2', 'SLC25A16', 'SLC25A6', 'SLC2A1', 'SLC35B2', 'SLC39A4', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMO', 'SNAI1', 'SNAI2', 'SNCA', 'SNIP1', 'SNW1', 'SNX33', 'SOCS3', 'SOX11', 'SOX17', 'SOX2', 'SOX4', 'SOX6', 'SOX9', 'SP1', 'SPN', 'SPP1', 'SPRY1', 'SRC', 'SREBF1', 'STAT1', 'STAT3', 'STAT4', 'STAT5A', 'STAT5B', 'STAT6', 'STC2', 'STIM1', 'STK11', 'STK24', 'STMN1', 'SUFU', 'SULF2', 'SUV39H1', 'TAF1', 'TBP', 'TBX2', 'TCEAL7', 'TCF4', 'TCF7L2', 'TCF7', 'TERT', 'TET3', 'TFDP1', 'TFF1', 'TGFA', 'TGFB1', 'TGFBR2', 'THBS1', 'THRA', 'THRB', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLR9', 'TM4SF1', 'TMPRSS4', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF8', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP2A', 'TP53', 'TP63', 'TP73', 'TRPV2', 'TSC22D3', 'TSC2', 'TWIST1', 'TXN', 'TYMS', 'UBA52', 'UBA7', 'UBB', 'UBC', 'UBE2C', 'UBTF', 'URGCP', 'USP18', 'USP2', 'USP9X', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VIP', 'VRK1', 'WDR77', 'WDTC1', 'WEE1', 'WHSC1', 'WIF1', 'WISP1', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'XBP1', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YY1', 'ZBTB17', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.1985567748074125e-15 NRMSE: 7.205376722700296e-16 MAPE: 2.848892944682803e-12 Pearson Correlation: -0.03689514584071177 Spearman Correlation: 0.021002828992293436 Coefficient of Determination: -2.8113705766369708 RMSE: 0.45962293390511627 NRMSE: 0.3555911786726468 MAPE: 861.3927030801524 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: RandomForests Pearson Correlation: 0.5897287080039353 Spearman Correlation: 0.5843404797931906 Coefficient of Determination: 0.3083193710793459 RMSE: 0.1985570374413439 NRMSE: 0.11936674889164728 MAPE: 495.1329249851251 Pearson Correlation: 0.2704944937479533 Spearman Correlation: 0.42988001170617507 Coefficient of Determination: 0.057348461081726754 RMSE: 0.22857919168491403 NRMSE: 0.1768422291304961 MAPE: 299.0876241555505 Protein: ERBB2 Protein Interaction Partners Count: 663 x_train_column_count: 657 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACPP', 'ACTA2', 'ACTB', 'ACTG1', 'ADAM10', 'ADAM17', 'ADRB2', 'AFP', 'AGRN', 'AKT1S1', 'AKT1', 'AKT2', 'ALB', 'ALDH1A1', 'ALK', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'ANO1', 'ANXA2', 'ANXA5', 'AP2B1', 'APP', 'AREG', 'ARHGEF11', 'ARHGEF12', 'ARID1A', 'ARL6IP5', 'AR', 'ATM', 'ATP2B2', 'AURKB', 'AXIN1', 'BAG1', 'BARD1', 'BCAR1', 'BCAR3', 'BCAS1', 'BCL2L11', 'BCL2L1', 'BDNF', 'BECN1', 'BEST1', 'BIRC5', 'BLNK', 'BMI1', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BSG', 'BTC', 'MIEN1', 'CA9', 'CALU', 'CARTPT', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAV1', 'CBLB', 'CBLC', 'CBL', 'CCL27', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD19', 'CD22', 'CD247', 'CD24', 'CD274', 'CD28', 'CD33', 'CD34', 'CD44', 'CD46', 'CD52', 'CD68', 'CD6', 'CD80', 'CD82', 'CDC37', 'CDC42', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK4', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CEACAM5', 'CEP70', 'CHEK2', 'CHGA', 'CHKA', 'CHKB', 'CISH', 'CLDN3', 'CLDN4', 'CLDN7', 'CLTC', 'CNN1', 'COPS5', 'CPNE3', 'CREB1', 'CRKL', 'CRK', 'YBX3', 'CSF1', 'CSF2', 'CSF3', 'CSK', 'CSPG4', 'CTAG1B', 'CTLA4', 'CTNNB1', 'CTNND1', 'CTSB', 'CTSD', 'CTTN', 'CUL5', 'CXCL12', 'CXCR1', 'CXCR4', 'CYCS', 'CYP19A1', 'CYTIP', 'DCN', 'DDX41', 'DDX53', 'DHH', 'DIAPH1', 'DICER1', 'DLG4', 'DMTF1', 'DNAJA3', 'DNM2', 'DNMT1', 'DOCK1', 'DOCK7', 'DUSP6', 'E2F1', 'E2F3', 'EEA1', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EGFR', 'EGF', 'EIF3A', 'EIF4EBP1', 'EIF4E', 'ELAVL1', 'ELF3', 'EML4', 'ENO2', 'EP300', 'EPCAM', 'EPGN', 'EPHA2', 'EPS15', 'EPX', 'ERAL1', 'ERBB2IP', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ERRFI1', 'ESCO1', 'ESR1', 'ESR2', 'ESRRB', 'ETS1', 'ETS2', 'ETV4', 'ETV6', 'EZH2', 'EZR', 'FASLG', 'FASN', 'FBXW7', 'FCGR1A', 'FCGR1B', 'FCGRT', 'FGF10', 'FGF13', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FIGF', 'FLT1', 'FLT3LG', 'FN1', 'FOLH1', 'FOLR1', 'FOS', 'FOXA1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXP3', 'FREM2', 'FSIP1', 'FYN', 'GAB1', 'GABPB1', 'GAPDH', 'GATA3', 'GATA4', 'GDF2', 'GLI1', 'GLI2', 'GLS', 'GNA11', 'GNAQ', 'GNAS', 'GNRH1', 'GPER1', 'GRAP2', 'GRB2', 'GRB7', 'GSTP1', 'GZMB', 'H2AFX', 'H2AFY', 'HBEGF', 'HDAC1', 'HDAC6', 'HEATR6', 'HGF', 'HIF1A', 'HK1', 'HLA-A', 'HMGA2', 'HNF4A', 'HOXB7', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPG2', 'ICAM1', 'ID1', 'IDH1', 'IDH2', 'IFNG', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IHH', 'IL10', 'IL2', 'IL4', 'IL6R', 'IL6ST', 'IL6', 'CXCL8', 'ILK', 'INPP4B', 'INS', 'IQGAP1', 'IQSEC1', 'IRS1', 'ITGA5', 'ITGA6', 'ITGAV', 'ITGB1', 'ITGB3', 'ITGB4', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JUN', 'JUP', 'KDR', 'KITLG', 'KLK3', 'KLRK1', 'KRAS', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'L1CAM', 'LAMP1', 'LCN2', 'LDHA', 'LEP', 'LIN28A', 'LIN7A', 'LIN7B', 'LIN7C', 'LINGO1', 'LOX', 'LRIG1', 'LRPPRC', 'MAGEA1', 'MAGEA3', 'MAGED4B', 'MAGED4', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK8', 'MATK', 'MCL1', 'MDK', 'MDM2', 'MEMO1', 'MET', 'MGMT', 'MKI67', 'MLANA', 'MLH1', 'KMT2C', 'MME', 'MMP11', 'MMP14', 'MMP16', 'MMP1', 'MMP2', 'MMP7', 'MMP9', 'MPP1', 'MRAP', 'MRAS', 'MSH2', 'MSH6', 'MSLN', 'MTA1', 'MTOR', 'MUC13', 'MUC16', 'MUC1', 'MUC4', 'MUC6', 'MUCL1', 'MYBL2', 'MYCN', 'MYC', 'NANOG', 'NCAM1', 'NCL', 'NCOA1', 'NCOA3', 'NCOR1', 'NDRG1', 'NF1', 'NF2', 'NFE2L2', 'NGF', 'NISCH', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NR1H4', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NRP1', 'NTF3', 'NTF4', 'OPCML', 'OSMR', 'PA2G4', 'PADI2', 'PAK1', 'PALB2', 'PAQR3', 'PARP1', 'PAX2', 'PCSK9', 'PDCD1LG2', 'PDCD1', 'PDCD4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PDGFRA', 'PDPN', 'PECAM1', 'PELP1', 'PEPD', 'PFKFB3', 'PGAP3', 'PGF', 'PGR', 'PI3', 'PIK3C2A', 'PIK3C2B', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIN1', 'PIP', 'PLAUR', 'PLAU', 'PLCG1', 'PLCG2', 'PLEK', 'PLG', 'PLXNB1', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPP3CA', 'PRDM10', 'PRF1', 'PRKACA', 'PRL', 'PROM1', 'PSCA', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'PTPN1', 'PTPRC', 'PTPRO', 'PTPRU', 'PTS', 'PXN', 'RAB25', 'RAD51', 'RAF1', 'RANBP2', 'RARA', 'RASA1', 'RASA2', 'RASSF1', 'RB1', 'RBPJ', 'RDX', 'RECK', 'REM1', 'REN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'S100A14', 'SCGB2A2', 'SCUBE2', 'SDC1', 'SDHC', 'SEMA3D', 'SEMA4D', 'SERPINB5', 'SERPINE1', 'SFRP1', 'PEAK1', 'SH3BGRL3', 'SH3BGRL', 'SH3TC2', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SIAH2', 'PMEL', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC4A7', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SMUG1', 'SMYD3', 'SNAI1', 'SNAI2', 'SOCS1', 'SOS1', 'SOX10', 'SOX2', 'SOX9', 'SP3', 'SPP1', 'SPRY2', 'SRCIN1', 'SRC', 'STARD3', 'STAT1', 'STAT2', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STOM', 'STUB1', 'SYP', 'TAGLN', 'TBX1', 'TERT', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TFRC', 'TGFA', 'TGFB1', 'THBS1', 'THRA', 'TIMP1', 'TJP1', 'TMPRSS2', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF4', 'TNFRSF8', 'TNFRSF9', 'TNFSF11', 'TNF', 'TNS1', 'TNS3', 'TNS4', 'TOB1', 'TOP1', 'TOP2A', 'TP53', 'TP63', 'TSC2', 'TWIST1', 'TYMS', 'TYR', 'UBA52', 'UBB', 'UBC', 'USP2', 'USP9X', 'VAV1', 'VAV2', 'VAV3', 'VCL', 'VEGFA', 'VEGFB', 'VEGFC', 'VIM', 'WASL', 'WDFY2', 'WDTC1', 'WNT10A', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7B', 'WNT9A', 'WNT9B', 'WT1', 'WWOX', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YES1', 'YY1', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 5.4157256600510615e-15 NRMSE: 9.71901308266077e-16 MAPE: 5.838663401609014e-12 Pearson Correlation: 0.4875609706674709 Spearman Correlation: 0.2860257535850161 Coefficient of Determination: -0.9176472249617562 RMSE: 1.4640036841095245 NRMSE: 0.24941712252917944 MAPE: 4342.635884419169 Predictor: ElasticNet Pearson Correlation: 0.8285531033640078 Spearman Correlation: 0.6780120659378646 Coefficient of Determination: 0.41952696326585703 RMSE: 0.7489423657770795 NRMSE: 0.13440453058469204 MAPE: 315.9035417079207 Pearson Correlation: 0.8027578749491756 Spearman Correlation: 0.5459369817578773 Coefficient of Determination: 0.3541002550382478 RMSE: 0.8496505991133039 NRMSE: 0.1447519633223681 MAPE: 1537.5167468177474 Predictor: RandomForests Pearson Correlation: 0.8552179643752656 Spearman Correlation: 0.7070736262574453 Coefficient of Determination: 0.7277264428403839 RMSE: 0.5129323675501023 NRMSE: 0.0920503862947261 MAPE: 255.91937889126447 Pearson Correlation: 0.7819357159654733 Spearman Correlation: 0.49868559632159526 Coefficient of Determination: 0.5924330275425123 RMSE: 0.6749277785461717 NRMSE: 0.11498505520659859 MAPE: 1549.7371408655852 Protein: ERBB3 Protein Interaction Partners Count: 245 x_train_column_count: 247 x_train columns: ['ADAM17', 'AGRN', 'AGTR2', 'AKT1', 'AKT2', 'AKT3', 'ALAS2', 'ALB', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'APIP', 'AREG', 'AR', 'BAMBI', 'BDNF', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BTC', 'CADM4', 'CASK', 'CASP3', 'CBLB', 'CBLC', 'CBL', 'CCND1', 'CCNE1', 'CD44', 'CD82', 'CDC42', 'CDH1', 'CDK4', 'CDK5', 'CDKN1B', 'CDKN2A', 'CLEC16A', 'COMMD5', 'COQ7', 'CRKL', 'CRK', 'CRYZL1', 'CSF1', 'CSK', 'CSPG5', 'CTNNB1', 'DCN', 'DHH', 'DOCK7', 'DUSP6', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EIF4EBP1', 'EIF4E', 'EML4', 'EPCAM', 'EPGN', 'EPN1', 'ERBB2IP', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'ESR2', 'FBXO9', 'FGF10', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FIGF', 'FKBP14', 'FLNA', 'FLT3LG', 'FN1', 'FOXA1', 'FOXO3', 'FREM2', 'FTSJ1', 'GAB1', 'GAPDH', 'GLE1', 'GRB2', 'GRB7', 'GRHL2', 'HBEGF', 'HGF', 'HGS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPG2', 'IGF1', 'IGF2', 'IL6ST', 'ILK', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'ITPKB', 'JAK1', 'JAK2', 'JUN', 'KDR', 'KITLG', 'KRAS', 'L1CAM', 'LAMA1', 'LAMB1', 'LAMC2', 'LIN7A', 'LIN7B', 'LIN7C', 'LRIG1', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARCH7', 'MDM2', 'MET', 'MITF', 'MMP9', 'MRPL49', 'MTOR', 'MUC1', 'MUC4', 'MYC', 'N4BP1', 'NDRG1', 'NEDD4L', 'NEDD4', 'NF1', 'NGF', 'NICN1', 'NOTCH1', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NTF3', 'NTF4', 'OAT', 'PA2G4', 'PARK7', 'PCSK9', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PGR', 'PI3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIP5K1C', 'PLCG1', 'PLCG2', 'PPP1R9A', 'PRKACA', 'PTEN', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN22', 'PTPN2', 'RASA1', 'RASA2', 'REM1', 'RGS4', 'RHOA', 'RHOC', 'RNF41', 'ROR1', 'RRAS2', 'SH2B3', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SLC25A16', 'SMAD4', 'SNAI2', 'SOS1', 'SOX10', 'SOX2', 'SPARC', 'SPRY2', 'SRC', 'STAT3', 'STAT5A', 'STAT5B', 'SYN3', 'TCF7L2', 'TGFA', 'TMEFF2', 'TNFRSF13C', 'TNS1', 'TP53', 'USP8', 'VAV1', 'VAV2', 'VAV3', 'VEGFA', 'VEGFB', 'VEGFC', 'WNT1', 'WNT5A', 'ZEB1', 'ZNF217', 'KRBOX4', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.7840835049604225 Spearman Correlation: 0.7768913942404723 Coefficient of Determination: 0.6147869427510211 RMSE: 0.27627421209242764 NRMSE: 0.07455848032568814 MAPE: 169.7089034866077 Pearson Correlation: 0.0237490887826914 Spearman Correlation: 0.1874646375963321 Coefficient of Determination: -3.082232561710664 RMSE: 1.0461413215332376 NRMSE: 0.3860884198470018 MAPE: 504.94563699497894 Predictor: ElasticNet Pearson Correlation: 0.4239181861408421 Spearman Correlation: 0.4429238941148785 Coefficient of Determination: 0.07711574110637431 RMSE: 0.42762537542772744 NRMSE: 0.11540381528597653 MAPE: 206.26099455545713 Pearson Correlation: 0.3990771289351761 Spearman Correlation: 0.4107452931421325 Coefficient of Determination: 0.06468415067353461 RMSE: 0.5007496244213628 NRMSE: 0.1848064188387774 MAPE: 283.9793566905946 Predictor: RandomForests Pearson Correlation: 0.5789425519444418 Spearman Correlation: 0.5770328254616109 Coefficient of Determination: 0.3094405582295372 RMSE: 0.3699051544179982 NRMSE: 0.09982678429942712 MAPE: 197.14907470637513 Pearson Correlation: 0.41826035781454896 Spearman Correlation: 0.4207737097294926 Coefficient of Determination: 0.16510252573364903 RMSE: 0.4731055676495301 NRMSE: 0.1746041163606044 MAPE: 362.5667723983798 Fold: 3 Protein: RB1 Protein Interaction Partners Count: 369 x_train_column_count: 366 x_train columns: ['AATF', 'ABCC1', 'ABL1', 'ACTL6A', 'ACTL6B', 'AFAP1', 'AHR', 'AKT1', 'ANXA5', 'ARID1A', 'ARID1B', 'ARID4A', 'ARMCX1', 'ARMCX2', 'ARMCX3', 'ARNT', 'AR', 'ASF1A', 'ATF2', 'ATM', 'AURKB', 'BCR', 'BDP1', 'BGLAP', 'BRCA1', 'BRF1', 'FAM208A', 'C4BPA', 'CABIN1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CBFB', 'CBX1', 'CBX4', 'CBX5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNT2', 'CDC25A', 'CDC27', 'CDC6', 'CDH1', 'CDK14', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPA', 'CEBPB', 'CEBPD', 'CEBPE', 'CHEK1', 'CHEK2', 'CLNK', 'COL1A1', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUX1', 'DCAF10', 'DGKZ', 'DNAJA3', 'DNMT1', 'DNMT3A', 'DUSP1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EGFR', 'EGF', 'EID1', 'EIF2AK1', 'EIF2AK4', 'AGO2', 'ELF1', 'ENC1', 'EP300', 'ERBB2', 'ESD', 'ESR1', 'ESR2', 'EZH2', 'FBXW7', 'FMO5', 'FOS', 'FOXM1', 'FRK', 'FZR1', 'G6PD', 'GAPDH', 'GATA1', 'GJA1', 'GNB2L1', 'GRB2', 'GSC', 'GTF2H1', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HARS2', 'HARS', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC8', 'HDC', 'HES1', 'HIF1A', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HIST4H4', 'HMGA1', 'HMGA2', 'HRAS', 'HSP90AA1', 'HSPA1A', 'HSPA8', 'ID2', 'IFI16', 'INS', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'KDM2A', 'KDM4A', 'KDM5A', 'KDM5B', 'PPP1R26', 'KIF11', 'KRAS', 'KRT10', 'KRT14', 'KRT5', 'L3MBTL2', 'L3MBTL1', 'LIMD1', 'LIN52', 'LIN54', 'LIN9', 'LMNA', 'LOR', 'LPAR6', 'MAF', 'MAP2K7', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEF2C', 'MORF4L1', 'MRFAP1', 'MRPL11', 'MRPS18B', 'MSH6', 'MTL5', 'MYBL2', 'MYC', 'MYOD1', 'NACC2', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NCR1', 'NDC80', 'NEO1', 'NFYA', 'NFYB', 'NFYC', 'NGF', 'NOTCH1', 'NPM1', 'NRAS', 'ORC1', 'PA2G4', 'PAX2', 'PAX3', 'PAX5', 'PAX6', 'PAX8', 'PCNA', 'PELP1', 'PGR', 'PHB', 'PHF21B', 'PIAS4', 'PIK3CA', 'PIK3R1', 'PIK3R3', 'PLK1', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPIA', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP1R3A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R3B', 'PPRC1', 'PRB1', 'PRB3', 'PRB4', 'PRDM2', 'PRH1', 'PRH2', 'PRIM1', 'PRIM2', 'PRKCB', 'PRMT2', 'PSMA7', 'PSMC1', 'PSMD10', 'PTEN', 'PTGDR', 'RAF1', 'RB1CC1', 'RBAK', 'RBBP4', 'RBBP5', 'RBBP6', 'RBBP7', 'RBBP8', 'RBBP9', 'RBL1', 'RBL2', 'RBFOX2', 'RFC1', 'RPS6KB1', 'RUNX2', 'S100A6', 'SETD1B', 'SETD7', 'SIRT1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMC1A', 'SMC2', 'SMC4', 'SMC5', 'SMYD2', 'SNW1', 'SP100', 'SP1', 'SP3', 'SPI1', 'STAM', 'STAT3', 'SUV39H1', 'SUV420H2', 'SUZ12', 'TAF1', 'TBP', 'TERT', 'TFAP2A', 'TFDP1', 'TFDP3', 'TGM2', 'THAP1', 'TMPO', 'TNS1', 'TOP2A', 'TP53BP1', 'TP53', 'TP73', 'TRDMT1', 'TRIM27', 'TTK', 'UBE2I', 'UBE3A', 'UBL4A', 'UBN1', 'UBR4', 'UBTF', 'UHRF1', 'USP4', 'USP7', 'VEGFA', 'VPS39', 'WDR59', 'WDR73', 'WEE1', 'WWTR1', 'YAP1', 'YY1', 'ZBTB16', 'ZBTB7A', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.8167097811843879 Spearman Correlation: 0.7621012808770368 Coefficient of Determination: 0.6670148666822512 RMSE: 0.13882702274981795 NRMSE: 0.05077056127480177 MAPE: 290.71593769754014 Pearson Correlation: -0.0028448413857497324 Spearman Correlation: 0.060541902018728416 Coefficient of Determination: -3.8026113525237797 RMSE: 0.4857759242121765 NRMSE: 0.34086189722565957 MAPE: 1264.8383483711634 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: RandomForests Pearson Correlation: 0.603978591035249 Spearman Correlation: 0.4517173845774052 Coefficient of Determination: 0.1786302313719249 RMSE: 0.21803737508853988 NRMSE: 0.07973865385040224 MAPE: 207.6690163505581 Pearson Correlation: 0.05449791794910446 Spearman Correlation: 0.1794411401638425 Coefficient of Determination: -0.046015379501774145 RMSE: 0.22670771524017264 NRMSE: 0.15907750483473387 MAPE: 208.21191034649345 Protein: CDH1 Protein Interaction Partners Count: 834 x_train_column_count: 826 x_train columns: ['ABCB1', 'ABCG2', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTR3', 'ACVR1B', 'ADAM10', 'ADAM15', 'ADAM17', 'ADAM9', 'AFP', 'AIMP1', 'AJAP1', 'AKAP9', 'AKT1', 'AKT2', 'AKTIP', 'ALB', 'ALCAM', 'ALDH1A1', 'ALDH3A1', 'ALK', 'AMOTL2', 'ANAPC4', 'ANAPC7', 'ANO1', 'ANXA2', 'ANXA5', 'AP1M1', 'AP1M2', 'APC2', 'APC', 'AQP1', 'AQP5', 'AREG', 'ARF6', 'ARHGAP31', 'ARID1A', 'ARL2BP', 'ARMC7', 'ARPC1A', 'ARPC2', 'ARRB2', 'ARVCF', 'AR', 'CLMP', 'ASF1A', 'ATF2', 'ATF3', 'ATM', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BAG3', 'BANP', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL6B', 'BCL9L', 'BCORL1', 'BMI1', 'BMP2', 'BMP4', 'BMP6', 'BMP7', 'BNIP3', 'BRCA1', 'BRCA2', 'BSG', 'BTBD7', 'BTC', 'BTF3', 'ANAPC15', 'CA2', 'CA9', 'CALCA', 'CALR', 'CAPN1', 'CAPNS1', 'CASP3', 'CASP8', 'CASP9', 'CASS4', 'CAV1', 'CBLL1', 'CBL', 'CBX7', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CCR7', 'CD1A', 'CD1B', 'CD1C', 'CD1E', 'CD207', 'CD24', 'CD274', 'CD276', 'CD2AP', 'CD34', 'CD44', 'CD46', 'CD68', 'CD82', 'CDC16', 'CDC23', 'CDC27', 'CDC42', 'CDC6', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH24', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK14', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN3', 'CDX2', 'CEACAM5', 'CFL1', 'CGN', 'CHGA', 'CHL1', 'CLCA2', 'CLDN1', 'CLDN2', 'CLDN3', 'CLDN4', 'CLDN5', 'CLDN7', 'CNTN1', 'COL1A1', 'CORO1C', 'CRB3', 'CREB1', 'CREBBP', 'CRYAB', 'YBX3', 'CSDC2', 'CSE1L', 'CSF2', 'CSNK2A1', 'CSNK2A2', 'CST5', 'CTBP1', 'CTBP2', 'CTCF', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTSL', 'CTTN', 'CXCL12', 'CXCL1', 'CXCR4', 'CYP1B1', 'DAAM1', 'DAB2IP', 'DACH1', 'DAPK1', 'DAP', 'DDR1', 'DDR2', 'DDX3X', 'DICER1', 'DKK1', 'DLC1', 'DLG1', 'DLG5', 'DNM2', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOT1L', 'DPAGT1', 'DPEP1', 'DSP', 'DUOX1', 'DUSP4', 'DVL1', 'DVL2', 'E2F1', 'ECT2', 'EDN1', 'EFEMP1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'EHD1', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'ELAVL1', 'ELF3', 'ENAH', 'ENG', 'EP300', 'EPB41L3', 'EPCAM', 'EPHA10', 'EPHA1', 'EPHA2', 'EPPK1', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ESRP1', 'ESRP2', 'ETS1', 'ETS2', 'EXOC3', 'EXOC4', 'EYA2', 'EZH2', 'EZR', 'F11R', 'F2RL2', 'SUPT20H', 'FBXL5', 'FER', 'FGF10', 'FGF13', 'FGF17', 'FGF19', 'FGF2', 'FGF4', 'FGF5', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FMN1', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC1', 'FOXC2', 'FOXJ2', 'FOXK2', 'FOXL1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXQ1', 'FRMPD2', 'FSCN1', 'FUT4', 'FXYD5', 'FYN', 'FZD1', 'FZD4', 'FZD7', 'FZR1', 'G6PD', 'GAB2', 'GABPA', 'GADD45A', 'GAPDH', 'GAS6', 'GATA1', 'GATA3', 'GATA4', 'GATA6', 'GDNF', 'GFRA1', 'GGT1', 'GJA1', 'GJB1', 'GJB2', 'GKN2', 'GLI1', 'GLI2', 'GMNN', 'GNA12', 'GNA13', 'GNB2L1', 'GNL3', 'GPA33', 'GRB2', 'GRHL2', 'GRHL3', 'GSK3B', 'GSN', 'GSTP1', 'H2AFZ', 'HAVCR2', 'HBEGF', 'HDAC1', 'HDAC2', 'HEPACAM', 'HES1', 'HGF', 'HGS', 'HIF1A', 'HMGA2', 'HNF4A', 'HOXB4', 'HOXD10', 'HPGDS', 'HPGD', 'HRAS', 'HSP90AA1', 'HSPA5', 'ICAM1', 'ID1', 'ID2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP3', 'IL10', 'IL15', 'IL17A', 'IL1B', 'IL24', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IQSEC1', 'IRS1', 'IRS2', 'ITGA5', 'ITGA6', 'ITGAE', 'ITGAM', 'ITGB1', 'ITGB4', 'ITGB7', 'ITPKB', 'IVL', 'JAG1', 'JAK2', 'AJUBA', 'JUN', 'JUP', 'KDM1A', 'KDM6A', 'KDR', 'KEAP1', 'KIFC3', 'KIT', 'KLF4', 'KLF5', 'KLF8', 'KLK3', 'KLK7', 'KLRG1', 'KRAS', 'KRT10', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'KRT9', 'LAMA1', 'LAMB1', 'LAMC2', 'LASP1', 'LATS1', 'LATS2', 'LCN2', 'LEF1', 'LEP', 'LGALS3', 'LGALS4', 'LGALS9', 'LGR5', 'LIF', 'LIMA1', 'LIN28A', 'LIPG', 'LLGL2', 'LMNA', 'LOR', 'LOXL2', 'LOXL3', 'LOX', 'LRP5', 'LRP6', 'LY6K', 'MACC1', 'MACROD1', 'MAD2L2', 'MAGI1', 'MAP2K1', 'MAP2K7', 'MAP4K5', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARK2', 'MARVELD2', 'MCAM', 'MCL1', 'MDM2', 'MED1', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGAT5', 'MGMT', 'MKI67', 'MLH1', 'MLLT4', 'MME', 'MMP11', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP1', 'MMP25', 'MMP27', 'MMP2', 'MMP3', 'MMP7', 'MMP8', 'MMP9', 'MPP5', 'MRAP', 'MSH2', 'MSN', 'MT1G', 'MTA1', 'MTA3', 'MTBP', 'MTDH', 'MTOR', 'MUC1', 'MUC4', 'MYCN', 'MYC', 'MYH6', 'MYO6', 'MYO7A', 'NANOG', 'NCAM1', 'NCOA1', 'NCSTN', 'NDRG1', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEUROG3', 'NF2', 'NFE2L2', 'NFIC', 'NKD2', 'NKX2-1', 'NKX6-1', 'NKX6-2', 'NME1', 'NOG', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NR2F1', 'NRP2', 'NUDT21', 'NUMBL', 'NUMB', 'NUP98', 'NUTF2', 'OTUB1', 'OVOL1', 'OVOL2', 'PARD3', 'PARD6A', 'PAX2', 'PAX5', 'PAX6', 'PAX8', 'PCSK9', 'PDCD4', 'PDGFRB', 'PDPN', 'PEBP1', 'PECAM1', 'PGR', 'PHLPP1', 'PI3', 'PIK3CA', 'PIK3R1', 'PIP5K1A', 'PIP5K1C', 'PIP', 'PIR', 'PITX1', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAUR', 'PLAU', 'PLCD1', 'PLEKHA7', 'PLG', 'PODXL', 'POLR2C', 'POSTN', 'POTEF', 'POU5F1', 'PPARA', 'PPARGC1A', 'PPARG', 'PPL', 'PPP6C', 'PRAME', 'PRDM10', 'PRKAR1A', 'PRKCA', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRKG1', 'PRMT5', 'PROC', 'PROM1', 'PRSS8', 'PSEN1', 'PTCH1', 'PTEN', 'PTF1A', 'PTGS2', 'PTK2', 'PTPN11', 'PTPN14', 'PTPRC', 'PTPRF', 'PTPRJ', 'PTPRM', 'PTPRS', 'PTPRT', 'PTPRU', 'PTRH2', 'PVRL1', 'PVRL2', 'PVR', 'PXN', 'RAB11A', 'RAB25', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RACGAP1', 'RAF1', 'RALA', 'RALBP1', 'RALGDS', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RARB', 'RASSF1', 'RB1', 'RBM4', 'RCOR1', 'RDX', 'REM1', 'RET', 'RHOA', 'RHOB', 'RHOC', 'RHOD', 'RICTOR', 'RND3', 'ROCK1', 'ROCK2', 'RPS6KB1', 'RPTOR', 'RRM2', 'RUNX2', 'RUNX3', 'S100A14', 'S100A4', 'S100A8', 'SATB1', 'SCRIB', 'SDC1', 'SDC4', 'SDHC', 'SELE', 'SELL', 'SELP', 'SEMA3C', 'SEMA3F', 'SENP1', 'SERPINB4', 'SERPINB5', 'SERPINE1', 'SFN', 'SFRP1', 'SFRP2', 'SFTPC', 'SHH', 'SIK1', 'SIN3A', 'SIRT1', 'SIRT2', 'SIRT4', 'SIRT7', 'SIX1', 'SIX2', 'SKIL', 'SKP2', 'SLC2A1', 'SLC39A6', 'SLC6A3', 'SLC9A3R1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SNAI1', 'SNAI2', 'SNAI3', 'SNX16', 'SNX1', 'SOX10', 'SOX17', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPARC', 'SPDEF', 'SPINT1', 'SPP1', 'SPRY1', 'SRCIN1', 'SRC', 'SRXN1', 'ST14', 'ST7L', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STX4', 'STYK1', 'SUCLG2', 'SUMO1', 'SUZ12', 'SYNJ2', 'SYP', 'TACC3', 'TACSTD2', 'TATDN1', 'TBX1', 'TBX3', 'TCF15', 'TCF4', 'TDGF1', 'TERT', 'TET2', 'TFF1', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBI', 'TGFBR1', 'TGFBR2', 'THBS1', 'THEM4', 'THUMPD1', 'THY1', 'TIAM1', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLN1', 'TLR4', 'TMPRSS2', 'TMPRSS4', 'TNFRSF6B', 'TNF', 'TNK2', 'TNS1', 'TP53BP1', 'TP53BP2', 'TP53', 'TRIM21', 'TRIM29', 'TRIM44', 'TRIP10', 'TRPS1', 'TSPYL2', 'TWIST1', 'TWIST2', 'TYRP1', 'T', 'UBE2I', 'UBE2S', 'USP48', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VEZT', 'VHL', 'VIM', 'VIPAS39', 'VPS33B', 'VTN', 'WASL', 'WDFY2', 'WDTC1', 'WIF1', 'WISP1', 'WISP3', 'WNT10A', 'WNT10B', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT9A', 'WNT9B', 'WT1', 'XIAP', 'YAP1', 'YBX1', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 5.404249438319938e-15 NRMSE: 8.605218684627778e-16 MAPE: 5.523129387180576e-12 Pearson Correlation: 0.30632360726072155 Spearman Correlation: 0.25360166585618277 Coefficient of Determination: -2.9946506160838102 RMSE: 1.8818201662982028 NRMSE: 0.3699563886089338 MAPE: 848.1113473114631 Predictor: ElasticNet Pearson Correlation: 0.6720467995217269 Spearman Correlation: 0.6616708515408142 Coefficient of Determination: 0.3756433881024124 RMSE: 0.9282104146110594 NRMSE: 0.1477994991578388 MAPE: 409.50239697319734 Pearson Correlation: 0.5811371199457144 Spearman Correlation: 0.5079739148867193 Coefficient of Determination: 0.25941526022746564 RMSE: 0.8102631674563817 NRMSE: 0.15929366717579163 MAPE: 211.0572976416361 Predictor: RandomForests Pearson Correlation: 0.7633671154176777 Spearman Correlation: 0.723551063217177 Coefficient of Determination: 0.5780737897783512 RMSE: 0.7630418037263422 NRMSE: 0.12149960251685331 MAPE: 220.65995332046512 Pearson Correlation: 0.7452569666029282 Spearman Correlation: 0.525151186423771 Coefficient of Determination: 0.5414466304273828 RMSE: 0.6375784983506092 NRMSE: 0.12534472896445745 MAPE: 148.159970259313 Protein: CDH2 Protein Interaction Partners Count: 472 x_train_column_count: 467 x_train columns: ['ABCG2', 'ABL1', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTR3', 'ADAM10', 'ADH1A', 'AFP', 'AHSG', 'AKT1', 'AKT3', 'ALB', 'ALCAM', 'ALDH1A1', 'AMBN', 'AMELX', 'AMOTL1', 'AMTN', 'ANGPT1', 'ANO8', 'ANXA5', 'APC2', 'APC', 'APLP2', 'APOA1', 'APOA2', 'APOA5', 'APOB', 'APOE', 'APOL1', 'APPL1', 'APP', 'ARHGAP32', 'ARMC7', 'ARPC5', 'ARVCF', 'AR', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BCL2L1', 'BDNF', 'BMI1', 'BMP15', 'BMP2', 'BMP4', 'BMP7', 'BNIP2', 'BOC', 'BPIFB2', 'RGCC', 'GSKIP', 'C3', 'C4A', 'CABLES1', 'CADM1', 'CALU', 'CASP3', 'CAV1', 'CBLL1', 'CCNA2', 'CCNB1', 'CCND1', 'CD24', 'CD34', 'CD44', 'CD80', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK4', 'CDK5', 'CDK6', 'CDKN2A', 'CDON', 'CDX2', 'CEBPZ', 'CFL1', 'CHGB', 'CHL1', 'CHRDL1', 'CKAP4', 'CLDN11', 'CLDN3', 'CLDN4', 'CLDN7', 'CORT', 'CP', 'CREBBP', 'CRP', 'CSF1', 'CSK', 'CST3', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTTN', 'CXCL12', 'CXCR4', 'CYLD', 'CYR61', 'DBN1', 'DDR1', 'DDR2', 'DKK1', 'DLG4', 'DLG5', 'DMP1', 'DNAJC3', 'DSP', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EFNB2', 'EFNB3', 'EGFR', 'EGF', 'EHMT2', 'EIF2AK3', 'ENAM', 'ENG', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA4', 'EPHB2', 'EPS8', 'ERBB2', 'ERBB4', 'ESR1', 'ESRP1', 'EXOC4', 'EZH2', 'EZR', 'F11R', 'F5', 'EVA1A', 'FAM20A', 'FAM20C', 'FBN1', 'FER', 'FGA', 'FGF13', 'FGF23', 'FGF2', 'FGFR1', 'FGFR4', 'FGG', 'FN1', 'FOXC2', 'FOXD3', 'FOXO1', 'FOXP4', 'FSTL1', 'FSTL3', 'FUCA2', 'GAA', 'GAPDH', 'GAS6', 'GATA4', 'GFAP', 'GJA10', 'GJA1', 'GJA3', 'GJB6', 'GJC1', 'GJC3', 'GJD3', 'GJD4', 'GLI1', 'GOLM1', 'GPC3', 'GRIA1', 'GRIA2', 'HGF', 'HMGA2', 'HNF4A', 'HRAS', 'HRC', 'HSP90B1', 'HSPA5', 'IARS2', 'IGF1R', 'IGF1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL1B', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'INVS', 'IQGAP1', 'ISL1', 'ITGA6', 'ITGB1', 'ITIH2', 'ITPKB', 'JAG1', 'JAM3', 'JUN', 'JUP', 'KCNA5', 'KDR', 'KIAA2022', 'KIF5B', 'KIT', 'KLF4', 'KNG1', 'KRAS', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT8', 'KTN1', 'L1CAM', 'LAMB1', 'LAMB2', 'LAMC1', 'LEF1', 'LGALS1', 'LRP5', 'LRP6', 'LRRC7', 'LTBP1', 'LTBP3', 'MAP1B', 'MAP2K6', 'MAP2K7', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MATN3', 'MBTPS1', 'MCAM', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEPE', 'MET', 'MFGE8', 'MFI2', 'MGAT4A', 'MIA3', 'MKI67', 'MLLT4', 'MMP14', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MPDZ', 'MPP5', 'MRAP', 'MRPL49', 'MSLN', 'MSN', 'MTHFD1', 'MUC1', 'MUC4', 'MXRA8', 'MYC', 'MYO10', 'MZF1', 'NANOG', 'NCAM1', 'NCSTN', 'NDRG1', 'NENF', 'NES', 'NFASC', 'NGF', 'NKX2-5', 'NLGN1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTUM', 'NRCAM', 'NT5C', 'NT5E', 'NTRK2', 'NUCB1', 'NUMBL', 'NUMB', 'OLFM3', 'P4HB', 'PARD3', 'PAX6', 'PCSK9', 'PC', 'PDGFRB', 'PDIA4', 'PDIA6', 'PECAM1', 'PENK', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PITX2', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PNPLA2', 'POU5F1', 'PPT2', 'PRKCDBP', 'PRKCSH', 'PROC', 'PROM1', 'PRPH', 'PRSS23', 'PSEN1', 'PTEN', 'PTK2', 'PTPN11', 'PTPN1', 'PTPN2', 'PTPRC', 'PTPRS', 'PVRL1', 'PVRL2', 'PVRL3', 'PXN', 'QSOX1', 'RAB11FIP1', 'RAB3D', 'RAB5A', 'RAC1', 'RCN1', 'RELN', 'REM1', 'RHOA', 'RHOB', 'RHOC', 'ROBO1', 'PTBP3', 'RPS6KB1', 'RUNX2', 'S100A14', 'S100A4', 'SARS2', 'SCARB2', 'SCG2', 'SCG3', 'SDC2', 'SEMA3A', 'SENP3', 'SERPINA10', 'SERPINA1', 'SERPINC1', 'SERPIND1', 'SERPINE1', 'SHH', 'SHISA5', 'SIRT7', 'SKP1', 'SLC2A1', 'SLC9A3R1', 'SLIT1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SNAI1', 'SNAI2', 'SNAI3', 'SOX10', 'SOX18', 'SOX1', 'SOX2', 'SOX4', 'SOX9', 'SP7', 'SPAG9', 'SPARCL1', 'SPARC', 'SPP1', 'SPP2', 'SRC', 'ST6GALNAC5', 'STAT3', 'STC2', 'SYP', 'TBX1', 'TCF3', 'TEK', 'TF', 'TGFB1', 'TGFBR1', 'TGM2', 'TGOLN2', 'THY1', 'TIMP1', 'TJP1', 'TJP3', 'TMEM132A', 'TNC', 'TNF', 'TNNT1', 'TP53', 'TRPS1', 'TSC2', 'TWIST1', 'TWIST2', 'USP9X', 'VANGL2', 'VCAM1', 'VCAN', 'VCL', 'VEGFA', 'VGF', 'VIM', 'VTN', 'VWA1', 'WFS1', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7A', 'XIRP1', 'ZBTB16', 'ZEB1', 'ZEB2', 'ZSCAN1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.9320716417306636 Spearman Correlation: 0.9042049538965786 Coefficient of Determination: 0.8687575453184944 RMSE: 0.1381126050597096 NRMSE: 0.05004442534231089 MAPE: 1280.7725154583063 Pearson Correlation: -0.012778444132940717 Spearman Correlation: -0.045369643013005154 Coefficient of Determination: -17.339581808896877 RMSE: 1.4216889631293326 NRMSE: 0.7490931792997095 MAPE: 26039.65782823251 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: RandomForests Pearson Correlation: 0.5579621011437973 Spearman Correlation: 0.5029575426329222 Coefficient of Determination: 0.20818808047373372 RMSE: 0.3392400841050704 NRMSE: 0.12292198134106472 MAPE: 367.54582968003314 Pearson Correlation: 0.045047914510734845 Spearman Correlation: 0.027703587326525274 Coefficient of Determination: -0.019269445275922337 RMSE: 0.33516169684487046 NRMSE: 0.17659793919787894 MAPE: 1881.682439110728 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.5727097811799439 Spearman Correlation: 0.5792644266997269 Coefficient of Determination: 0.3279964934591795 RMSE: 0.1742073915858315 NRMSE: 0.12221992450035887 MAPE: 860.7578539003549 Pearson Correlation: 0.3078638378825443 Spearman Correlation: 0.3008441501764361 Coefficient of Determination: -0.033130551159451516 RMSE: 0.19142256059096116 NRMSE: 0.16650217940014192 MAPE: 244.52503490758494 Predictor: ElasticNet Pearson Correlation: 0.3537296502574104 Spearman Correlation: 0.3924945986822761 Coefficient of Determination: 0.008160638904660567 RMSE: 0.21164181539152277 NRMSE: 0.1484830606945072 MAPE: 112.44605711030167 Pearson Correlation: 0.3033541792228888 Spearman Correlation: 0.39626678636890733 Coefficient of Determination: 0.004094863769265267 RMSE: 0.1879422860835381 NRMSE: 0.16347498506835711 MAPE: 99.86167415143201 Predictor: RandomForests Pearson Correlation: 0.5653902264193225 Spearman Correlation: 0.5647909017496053 Coefficient of Determination: 0.2839064224243535 RMSE: 0.17983147143600559 NRMSE: 0.1261656503872745 MAPE: 669.4133299085007 Pearson Correlation: 0.36166175579365273 Spearman Correlation: 0.3745059165326251 Coefficient of Determination: 0.12762128326974997 RMSE: 0.17590089529614486 NRMSE: 0.15300120495111194 MAPE: 201.7567420267845 Protein: PTEN Protein Interaction Partners Count: 884 x_train_column_count: 876 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ABTB1', 'ACTB', 'ACTG1', 'ADM', 'AEBP1', 'AFP', 'AKT1S1', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'AMHR2', 'ANXA2', 'ANXA5', 'APAF1', 'APC', 'ARAF', 'AREG', 'ARHGAP21', 'ARID1A', 'ARID2', 'ARL2BP', 'AR', 'ATF3', 'ATG12', 'ATG5', 'ATG7', 'ATM', 'ATRX', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'AXL', 'BAD', 'BAG5', 'BARD1', 'BAX', 'BBC3', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BIRC3', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BNIP3', 'BRAF', 'BRCA1', 'BRCA2', 'BRD4', 'BTG2', 'BTK', 'SPRTN', 'CLHC1', 'CA9', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBL', 'CBX7', 'CCL2', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD24', 'CD274', 'CD34', 'CD44', 'CD79A', 'CD79B', 'CDC14A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC7', 'CDH17', 'CDH1', 'CDH2', 'CDIPT', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CENPC', 'CFL1', 'CFLAR', 'CFTR', 'CHD1', 'CHD8', 'CHEK1', 'CHEK2', 'CHKA', 'CHORDC1', 'CHUK', 'CLTCL1', 'CLTC', 'CNOT6L', 'CREB1', 'CREBBP', 'CRP', 'CSF1R', 'CSF1', 'CSK', 'CSN2', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTGF', 'CTLA4', 'CTNNB1', 'CUL1', 'CUL3', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'DAPK1', 'DAXX', 'DBN1', 'DCAF13', 'DDIT4', 'DDR2', 'DECR1', 'DEPTOR', 'DGCR8', 'DICER1', 'DLC1', 'DLG1', 'DLG4', 'DNM1L', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOLPP1', 'DUSP1', 'DUSP6', 'DUT', 'DVL1', 'DYRK1A', 'E2F1', 'E2F2', 'E2F3', 'ECSCR', 'EGFR', 'EGF', 'EGR1', 'EIF2AK2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4EBP2', 'EIF4E', 'EIF4G1', 'EML4', 'ENDOG', 'EP300', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA3', 'EPHA4', 'EPHA5', 'EPHA7', 'EPHB1', 'EPHB2', 'EPHB3', 'EPHB4', 'ERBB2', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ESR1', 'ETS1', 'ETS2', 'ETV1', 'ETV6', 'EYA2', 'EZH2', 'EZR', 'FABP4', 'FASLG', 'FASN', 'FBXW7', 'FCGR1B', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FIG4', 'FKBP1A', 'FLCN', 'FLT1', 'FLT3', 'FLT4', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXG1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FOXP3', 'FRK', 'FYN', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GCK', 'GDF10', 'GDF2', 'GFAP', 'GJA1', 'GLI1', 'GNA11', 'GNAQ', 'GNAS', 'GNRHR', 'GRASP', 'GRB2', 'GRPR', 'GSK3A', 'GSK3B', 'GSTP1', 'H1F0', 'H2AFX', 'HAVCR2', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HES1', 'HGF', 'HIF1A', 'HIST1H2BA', 'HK1', 'HK2', 'HMGA2', 'HNF4A', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA1A', 'HSPA1B', 'HSPA2', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'ID1', 'ID4', 'IDH1', 'IDH2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL17A', 'IL21', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INPP4A', 'INPP4B', 'INPP5A', 'INPP5B', 'INPP5D', 'INPP5E', 'INPP5F', 'INPP5J', 'INPP5K', 'INPPL1', 'INSRR', 'INSR', 'INS', 'IPMK', 'IPO11', 'IQGAP1', 'IRAK1', 'IRS1', 'IRS2', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'ITPR3', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUN', 'KAT2B', 'KDM5B', 'KDM5C', 'KDM6A', 'KDR', 'KEAP1', 'ATG13', 'KIF11', 'KLLN', 'KITLG', 'KIT', 'KLF17', 'KLF2', 'KLF4', 'KLK3', 'KPNA1', 'KPNA2', 'KPNA5', 'KPNA6', 'KPNA7', 'KRAS', 'KRT14', 'KRT5', 'KRT8', 'LASP1', 'LATS1', 'LATS2', 'LCK', 'LDHA', 'LEF1', 'LEP', 'LGALS3', 'LIG4', 'LOX', 'LRIG1', 'LRP1B', 'LRRK2', 'LYN', 'LYPD1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAN2C1', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K3', 'MAP2K4', 'MAP2K7', 'MAP3K1', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK4', 'MAPK6', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAP1', 'MAPT', 'MARCH2', 'MARCH3', 'MAST1', 'MAST2', 'MAST3', 'MAST4', 'MATK', 'MCL1', 'MCM2', 'MCM7', 'MCRS1', 'MDK', 'MDM2', 'MDM4', 'MECOM', 'MECP2', 'MED12', 'MEN1', 'MET', 'MGMT', 'MINPP1', 'MITF', 'MKI67', 'MKRN1', 'MLH1', 'MLH3', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT1', 'MLST8', 'MME', 'MMP2', 'MMP9', 'MOV10', 'MRAP', 'MRE11A', 'MSH2', 'MSH6', 'MTDH', 'MTMR2', 'MTOR', 'MTSS1', 'MUTYH', 'MVP', 'MYCN', 'MYC', 'MYLK', 'MYOCD', 'NANOG', 'NCKAP1', 'NCOA3', 'NCOR2', 'NDFIP1', 'NDFIP2', 'NDRG1', 'NDRG2', 'NEDD4L', 'NEDD4', 'NES', 'NF1', 'NF2', 'NFATC1', 'NFATC4', 'NFE2L2', 'NFKBIA', 'NGFR', 'NKX3-1', 'NLGN3', 'NLGN4X', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR1H4', 'NR3C2', 'NRAS', 'NRP2', 'NTRK1', 'NTRK2', 'NUMB', 'OCRL', 'OLIG2', 'OTUD3', 'PALB2', 'PARD3', 'PARD6A', 'PARD6B', 'PARD6G', 'PARK2', 'PARK7', 'PARP1', 'PAX8', 'PBK', 'PBRM1', 'PCGF2', 'PCSK9', 'PDCD1', 'PDCD4', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PDK1', 'PDK2', 'PDPK1', 'PDZK1', 'PECAM1', 'PGM3', 'PGR', 'PHF6', 'PHLPP1', 'PHLPP2', 'PI3', 'PI4K2A', 'PI4K2B', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIK3R5', 'PIKFYVE', 'PINK1', 'PIP4K2A', 'PIP4K2B', 'PIP4K2C', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PIP5KL1', 'PKM', 'PLCB1', 'PLCB2', 'PLCB3', 'PLCB4', 'PLCD1', 'PLCD3', 'PLCD4', 'PLCE1', 'PLCG1', 'PLCG2', 'PLCH1', 'PLCH2', 'PLCZ1', 'PLEKHA1', 'PLEK', 'PLK1', 'PLK2', 'PLK3', 'BPIFA1', 'PMAIP1', 'PML', 'PMPCA', 'PMS1', 'PMS2', 'POLE', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPM1D', 'PPP2R1A', 'PPP2R4', 'PPP2R5A', 'PPP2R5E', 'PPP3CA', 'PPP6C', 'PRDX1', 'PREX2', 'PRKAA1', 'PRKAA2', 'PRKCI', 'PRKCZ', 'PRKDC', 'PRMT5', 'PROM1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTER', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPMT1', 'PTPN11', 'PTPN12', 'PTPN13', 'PTPN1', 'PTPRC', 'PTPRD', 'PTS', 'PXN', 'RAB7A', 'RAC1', 'RAC2', 'RAD51C', 'RAD51D', 'RAD51', 'RAD52', 'RAF1', 'RASA1', 'RASSF1', 'RB1CC1', 'RB1', 'RBL1', 'RBL2', 'RBM38', 'RBFOX2', 'RCN1', 'RECK', 'RELA', 'REL', 'REM1', 'RETN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'DROSHA', 'RNF146', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KB1', 'RPS6KB2', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'RRM1', 'RSL1D1', 'RUNX3', 'RWDD3', 'SACM1L', 'SALL4', 'SCAI', 'SCGB1D4', 'SCRIB', 'SDHB', 'SDHC', 'SERPINA1', 'SERPINA4', 'SERPINB5', 'SESN1', 'SESN2', 'SETD2', 'SGK1', 'SGK2', 'SGK3', 'SHANK2', 'SHARPIN', 'SHC1', 'SHFM1', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT5', 'SIRT6', 'SIRT7', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC2A4', 'SLC34A2', 'SLC9A3R1', 'SLC9A3R2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNCA', 'SNX27', 'SOCS1', 'SOCS3', 'SOD2', 'SOS1', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPOP', 'SPRY1', 'SPRY2', 'SRBD1', 'SRC', 'SREBF1', 'SRF', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STMN1', 'STUB1', 'STX16', 'SUCLG2', 'SUMO1', 'SYK', 'SYNJ1', 'SYNJ2', 'TACSTD2', 'TBX1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TEP1', 'TERT', 'TET1', 'TGFB1', 'TGFBR1', 'TGFBR2', 'TGM2', 'THBS1', 'TIMP1', 'TIMP3', 'TJP1', 'TLR4', 'TMEM55A', 'TMEM55B', 'TMPRSS2', 'TNFRSF10B', 'TNFSF10', 'TNF', 'TNKS2', 'TNKS', 'TNPO2', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TPM1', 'TRAF6', 'TRIM27', 'TRIM29', 'TSC1', 'TSC2', 'TTN', 'TUT1', 'TWIST1', 'TWSG1', 'TXN', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2E1', 'UBE2I', 'UBE2L3', 'UBE3A', 'ULK1', 'ULK2', 'USP10', 'USP13', 'USP18', 'USP28', 'USP7', 'USP8', 'UTF1', 'UVRAG', 'VCL', 'VDR', 'VEGFA', 'VHL', 'WDR18', 'WDTC1', 'WEE1', 'WIPI1', 'WIPI2', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT9A', 'WNT9B', 'WT1', 'WWP1', 'WWP2', 'XIAP', 'XPO1', 'XPO5', 'YAP1', 'YES1', 'YWHAB', 'YWHAZ', 'YY1', 'ZEB1', 'ZEB2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.07154881283728e-15 NRMSE: 4.80267189873705e-16 MAPE: 4.410916740176861e-12 Pearson Correlation: -0.022616714122748034 Spearman Correlation: 0.11035299692016112 Coefficient of Determination: -3.8726278536984866 RMSE: 1.0395949969488159 NRMSE: 0.24855233513814753 MAPE: 405.7274816825371 Predictor: ElasticNet Pearson Correlation: 0.42702392227674857 Spearman Correlation: 0.4246716681201056 Coefficient of Determination: 0.07687871627673382 RMSE: 0.6046209523832956 NRMSE: 0.09453849619002355 MAPE: 330.0232268391777 Pearson Correlation: 0.29930389867436175 Spearman Correlation: 0.3268544495567277 Coefficient of Determination: 0.007958422471266657 RMSE: 0.46908062615562174 NRMSE: 0.11215048681576573 MAPE: 93.25886169933536 Predictor: RandomForests Pearson Correlation: 0.616328020472098 Spearman Correlation: 0.5349771004536952 Coefficient of Determination: 0.3047122631985977 RMSE: 0.5247302430469055 NRMSE: 0.08204678962503409 MAPE: 280.01313012289415 Pearson Correlation: 0.3753084805599388 Spearman Correlation: 0.37778276537113936 Coefficient of Determination: 0.1298675749156296 RMSE: 0.43931419412355455 NRMSE: 0.10503375750096938 MAPE: 106.72854284999677 Protein: BRCA2 Protein Interaction Partners Count: 361 x_train_column_count: 351 x_train columns: ['ABL1', 'ACHE', 'ADRB1', 'ADRB2', 'AKT1', 'ALK', 'APEX1', 'ARID1A', 'ARPC1A', 'AR', 'ATAD5', 'ATM', 'ATRIP', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'B3GALTL', 'BACH1', 'BARD1', 'BCCIP', 'BCHE', 'BDNF', 'BECN1', 'BIRC5', 'BLM', 'BMI1', 'BRCA1', 'BRCC3', 'BRE', 'BRIP1', 'SLX4', 'BUB1B', 'BUB1', 'BUB3', 'SFR1', 'RHNO1', 'RMI2', 'BABAM1', 'MMS22L', 'CASC1', 'CASC5', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCNE1', 'CDC25A', 'CDC25C', 'CDC45', 'CDC6', 'CDH1', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CENPE', 'CENPF', 'CEP55', 'CHEK1', 'CHEK2', 'CHRNA1', 'CLSPN', 'CNTROB', 'CREM', 'CSMD3', 'CTNNB1', 'CYP19A1', 'DMC1', 'DNA2', 'DSN1', 'DYNC1LI2', 'EGFR', 'EGF', 'ELAC2', 'EME1', 'EME2', 'ENAM', 'EPCAM', 'ERBB2', 'ERBB3', 'ERCC1', 'ERCC2', 'ERCC4', 'ERCC5', 'ERCC6', 'ERCC8', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM175A', 'FANCA', 'FANCB', 'FANCC', 'FANCD2', 'FANCE', 'FANCF', 'FANCG', 'FANCI', 'FANCL', 'FANCM', 'FBN1', 'FBXO18', 'FBXW7', 'FEN1', 'FGFR2', 'FHIT', 'FLNA', 'FOXM1', 'GAPDH', 'GEN1', 'SLX1B', 'H2AFX', 'HELQ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HMG20A', 'HMG20B', 'HMMR', 'HNRNPC', 'HOXB13', 'HRAS', 'HUS1', 'ITPKB', 'KAT2B', 'KAT5', 'KEAP1', 'SPIDR', 'KIF23', 'KIF4A', 'KIT', 'KLK3', 'KRAS', 'KRT5', 'LIG1', 'LIG3', 'LIG4', 'LIMD1', 'LSP1', 'MAD2L2', 'MAGED1', 'MAMSTR', 'MAP2K2', 'MAP3K1', 'MCM10', 'MCPH1', 'MDC1', 'MDM2', 'MDM4', 'MEN1', 'MGMT', 'MKI67', 'MLH1', 'MLH3', 'KMT2C', 'MND1', 'MORF4L1', 'MRE11A', 'MRPL36', 'MSH2', 'MSH3', 'MSH4', 'MSH5', 'MSH6', 'MTA2', 'FAN1', 'MUC1', 'MUS81', 'MUTYH', 'MYC', 'NBN', 'NCAPG', 'NEDD4', 'NF1', 'NHEJ1', 'NNT', 'NOTCH1', 'NSL1', 'NSMCE4A', 'OBFC1', 'OGG1', 'PALB2', 'PARG', 'PARP1', 'PARP2', 'PARP3', 'PAXIP1', 'PCNA', 'PDLIM7', 'PDS5A', 'PDS5B', 'PGR', 'PIK3CA', 'PLCB4', 'PLEC', 'PLEKHH1', 'PLK1', 'PMS1', 'PMS2', 'PNOC', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'POLN', 'POLQ', 'PRDM9', 'PRKDC', 'PRSS1', 'PSMC3IP', 'PSMD3', 'PSMD6', 'PTEN', 'RAD17', 'RAD18', 'RAD1', 'RAD21', 'RAD23B', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD52', 'RAD54B', 'RAD54L', 'RAD9A', 'RAD9B', 'RAG2', 'RASSF1', 'RBBP8', 'RBMX', 'RECQL4', 'RECQL5', 'RECQL', 'RET', 'REV1', 'REV3L', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RNF168', 'RNF8', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SKP2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCAL1', 'SMARCB1', 'SMC1A', 'SMC2', 'SMC3', 'SMC4', 'SMC5', 'SMC6', 'SMUG1', 'SNAI2', 'SP1', 'SPO11', 'STAT5A', 'STK11', 'STRA13', 'SUV39H1', 'SYCP3', 'TBCE', 'TDP1', 'TERT', 'TEX15', 'TMPRSS2', 'TNS1', 'TOP1', 'TOP2A', 'TOP3A', 'TOP3B', 'TOPBP1', 'TOX3', 'TP53BP1', 'TP53', 'TPX2', 'TRIP12', 'PRSS58', 'TTK', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2D1', 'UBE2E2', 'UBE2E3', 'UBE2N', 'UBE2T', 'UIMC1', 'USF1', 'USP11', 'USP15', 'USP1', 'USP21', 'USP4', 'UVRAG', 'VEGFA', 'VWF', 'WDR48', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WTIP', 'XPA', 'XPO1', 'XRCC1', 'XRCC2', 'XRCC3', 'XRCC4', 'XRCC5', 'XRCC6', 'ZFYVE26', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.8370864232511477 Spearman Correlation: 0.8194457309388669 Coefficient of Determination: 0.7007136799913993 RMSE: 0.10397086262058042 NRMSE: 0.07007444977528134 MAPE: 335.0665956607187 Pearson Correlation: 0.01707565923018896 Spearman Correlation: -0.040845895834112654 Coefficient of Determination: -1.9457209116499472 RMSE: 0.36751595210626714 NRMSE: 0.2527811265682185 MAPE: 959.7491478062452 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: RandomForests Pearson Correlation: 0.5952029688956896 Spearman Correlation: 0.5418972659754484 Coefficient of Determination: 0.22467742167893257 RMSE: 0.16734372414890591 NRMSE: 0.1127865932580985 MAPE: 173.18457571961864 Pearson Correlation: 0.13445482322785277 Spearman Correlation: 0.17930148754972008 Coefficient of Determination: 0.016841652050054723 RMSE: 0.21232059918593638 NRMSE: 0.14603621951174875 MAPE: 163.7509145227982 Protein: CDKN2A Protein Interaction Partners Count: 612 x_train_column_count: 605 x_train columns: ['ABCC1', 'ABL1', 'ACAP1', 'ACAP2', 'ACP5', 'ACTA1', 'ACTB', 'ACTG1', 'ADAMTS9', 'ADAP1', 'AFP', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD12', 'ANXA5', 'AP3D1', 'AP3S1', 'AP3S2', 'APAF1', 'APBA1', 'APBA2', 'ARAP1', 'ARAP2', 'ARF1', 'ARF3', 'ARF4', 'ARF5', 'ARF6', 'ARFGAP1', 'ARFGAP3', 'ARFIP2', 'ARFRP1', 'ARID1A', 'ARID2', 'ARID5B', 'ARL10', 'ARL1', 'ARL2', 'ARL3', 'ARL4A', 'ARL5A', 'AR', 'ASAP1', 'ATM', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'AXIN1', 'BAP1', 'BCL2L11', 'BCL2L1', 'BCL6', 'BECN1', 'BIRC5', 'BMI1', 'BRAF', 'BRCA1', 'BRCA2', 'BUB1B', 'RGCC', 'C1QBP', 'RABL6', 'CACNA1G', 'CADM1', 'CAMK1D', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNL1', 'CD274', 'CD34', 'CD44', 'CDC123', 'CDC20', 'CDC25A', 'CDC25C', 'CDC42', 'CDC45', 'CDC5L', 'CDC6', 'CDC7', 'CDH13', 'CDH17', 'CDH1', 'CDH2', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5RAP3', 'CDK6', 'CDK7', 'CDKAL1', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDX2', 'CEACAM5', 'CEBPB', 'CEBPE', 'CHEK1', 'CHEK2', 'CHFR', 'CHKA', 'COMMD1', 'CRABP1', 'CREBBP', 'CSF1R', 'CSF1', 'CSF2', 'CTBP1', 'CTBP2', 'CTCF', 'CTLA4', 'CTNNB1', 'CTSK', 'CUL1', 'CUL3', 'CXCR4', 'CYCS', 'CYLD', 'CYTH1', 'CYTH2', 'CYTH3', 'DAB2IP', 'DAP', 'DAXX', 'DICER1', 'DIRAS3', 'DLEC1', 'DMTF1', 'DNAH3', 'DNMT1', 'DNMT3A', 'DNMT3B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EBF1', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EP300', 'EPCAM', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ETS1', 'ETV6', 'EWSR1', 'EZH1', 'EZH2', 'FAT1', 'FBXW7', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FKBP2', 'FLT3', 'FMN2', 'FN1', 'FOS', 'FOXA1', 'FOXM1', 'FOXN2', 'FOXO1', 'FOXO3', 'FTO', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GATA4', 'GATA5', 'GBF1', 'GDF15', 'GGA1', 'GGA2', 'GGA3', 'GIT1', 'GIT2', 'GLI1', 'GLTSCR2', 'GMNN', 'GNA11', 'GNAQ', 'GNAS', 'GNL3', 'GOLPH3', 'GP5', 'GSPT1', 'GSTP1', 'H2AFX', 'H2AFZ', 'H3F3A', 'H3F3B', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC9', 'HELLS', 'HGF', 'HHEX', 'HIC1', 'HIF1A', 'HIST1H2BA', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AA3', 'HIST2H2AC', 'HIST2H4A', 'HIST4H4', 'HLTF', 'HMGA2', 'HNF4A', 'HNRNPD', 'HOPX', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA4', 'HSPA9', 'HUWE1', 'ID1', 'IDH1', 'IDH2', 'IGF1R', 'IGF1', 'IGF2BP2', 'IGF2R', 'IGF2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING4', 'INS', 'IQSEC1', 'IRS1', 'ISOC2', 'ITGAM', 'JAK1', 'JAK2', 'JAK3', 'JAZF1', 'JUNB', 'JUN', 'KAT2B', 'KAT5', 'KCNJ11', 'KCNQ1', 'KDM1A', 'KDM2B', 'KDM6A', 'KDM6B', 'KDR', 'KEAP1', 'KIAA1549', 'KIT', 'KLF4', 'KRAS', 'KRT19', 'KRT20', 'KRT5', 'KRT7', 'LATS2', 'LOX', 'LRRK2', 'MACROD2', 'MAF', 'MAP2K1', 'MAP2K4', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MAX', 'MC1R', 'MCL1', 'MCM10', 'MCM2', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEN1', 'MEOX1', 'MEOX2', 'MET', 'MGMT', 'MITF', 'MKRN1', 'MLANA', 'MLH1', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT3', 'MME', 'MMP2', 'MMP7', 'MMP9', 'MOV10', 'MRAS', 'MSH2', 'MSH6', 'MTA1', 'MTAP', 'MTHFR', 'MTNR1B', 'MTOR', 'MUC1', 'MYBL2', 'MYCL', 'MYCN', 'MYC', 'MYOD1', 'KAT6A', 'NANOG', 'NCAM1', 'NCL', 'NCOR1', 'NES', 'NEUROG1', 'NF1', 'NF2', 'NFATC1', 'NFE2L2', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NPM1', 'NRAS', 'NSUN2', 'ORC4', 'ORC5', 'OSBP2', 'P2RY8', 'PA2G4', 'PALB2', 'PARP1', 'PAX3', 'PAX5', 'PAX8', 'PBRM1', 'PCGF2', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PEX19', 'PGR', 'PHLDB1', 'PI3', 'PIAS2', 'PIGF', 'PIK3CA', 'PIK3R1', 'PIP4K2A', 'PLEKHA3', 'PLEKHA8', 'PLEK', 'PLK1', 'PMAIP1', 'PML', 'PMS2', 'POTEF', 'POU5F1', 'PPARA', 'PPARG', 'PPM1D', 'PPP1R9B', 'PPP3CA', 'PRDM2', 'PRMT6', 'PROM1', 'PRSS1', 'PSMC3', 'PSMD10', 'PSME3', 'PTCH1', 'PTEN', 'PTER', 'PTF1A', 'PTGS2', 'PTPN11', 'PTPRC', 'PTPRD', 'PXN', 'RAB11A', 'RAB5A', 'RABEP1', 'RABGEF1', 'RAC2', 'RAD51', 'RAF1', 'RAP2B', 'RARB', 'RASSF1', 'RASSF2', 'RB1', 'RBL1', 'RBL2', 'RCC1', 'RELA', 'RELB', 'REL', 'RET', 'RHOA', 'DROSHA', 'RNF2', 'RNF43', 'ROS1', 'RPL11', 'RPRM', 'RPS27A', 'RPS6KB1', 'RRAS2', 'RRAS', 'RTEL1', 'RUNX2', 'RUNX3', 'SDHC', 'SENP1', 'SENP3', 'SERPINE1', 'SERTAD1', 'SETD2', 'SFN', 'SFRP1', 'SFRP2', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SIX2', 'SKP2', 'SLC30A8', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SNAI1', 'SNAI2', 'SNCA', 'SOCS1', 'SOX2', 'SP1', 'SPEN', 'SRC', 'STAT1', 'STAT3', 'STK11', 'STK25', 'STK33', 'STMN1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUV39H1', 'SUZ12', 'SYNE1', 'SYP', 'TBL1XR1', 'TBRG1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TERT', 'TET2', 'TFDP1', 'TFPI2', 'TGFBR2', 'THADA', 'THBS1', 'TIMP3', 'TMCO1', 'TMEM115', 'TNFRSF10B', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TRADD', 'TRIM28', 'TRIP12', 'PRSS58', 'TSC2', 'TSPAN8', 'TTF1', 'TWIST1', 'TWSG1', 'TYR', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2I', 'UBE3A', 'UCHL1', 'USP7', 'UTF1', 'VEGFA', 'VHL', 'WDTC1', 'WEE1', 'WFS1', 'WHSC1', 'WIF1', 'WRN', 'WT1', 'WWOX', 'XRCC1', 'YY1', 'ZBTB17', 'ZBTB7A', 'ZEB1', 'ZFP91', 'ZNF148', 'ZNF217', 'ZNF227', 'ZNF410', 'ZNF420', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 4.438997035466594e-15 NRMSE: 1.036373981011065e-15 MAPE: 5.766252666776095e-12 Pearson Correlation: 0.24134781384366713 Spearman Correlation: 0.20389032282198036 Coefficient of Determination: -5.2754459436279415 RMSE: 1.6446909021590972 NRMSE: 0.507761693729461 MAPE: 639.5960581128038 Predictor: ElasticNet Pearson Correlation: 0.506447464426483 Spearman Correlation: 0.36153209820752313 Coefficient of Determination: 0.17063200305014303 RMSE: 0.6079700699641991 NRMSE: 0.1419429561926128 MAPE: 249.92124943953885 Pearson Correlation: 0.38529570791746676 Spearman Correlation: 0.2952081696779262 Coefficient of Determination: 0.10304481816071576 RMSE: 0.6217952000674807 NRMSE: 0.19196542251473578 MAPE: 143.02142126829108 Predictor: RandomForests Pearson Correlation: 0.6768243977972589 Spearman Correlation: 0.62893616829792 Coefficient of Determination: 0.4463543207772377 RMSE: 0.49673472448774103 NRMSE: 0.11597280642691003 MAPE: 163.63957323645567 Pearson Correlation: 0.6157401758886617 Spearman Correlation: 0.5990972456015662 Coefficient of Determination: 0.3702552962414162 RMSE: 0.5210078363349826 NRMSE: 0.16084956819331994 MAPE: 105.49758831538445 Protein: TP53 Protein Interaction Partners Count: 1000 x_train_column_count: 991 x_train columns: ['ABCB1', 'ABCC1', 'ABL1', 'ACTB', 'ACTL6A', 'ADAM17', 'AFP', 'AGT', 'AICDA', 'AIFM2', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD2', 'ANXA1', 'ANXA2', 'ANXA5', 'APAF1', 'APBB1', 'APC', 'APEX1', 'APOBEC3B', 'APP', 'ARID1A', 'ARID3A', 'AR', 'ASF1A', 'ASXL1', 'ATF2', 'ATF3', 'ATG7', 'ATM', 'ATN1', 'ATRIP', 'ATRX', 'ATR', 'ATXN3', 'AURKA', 'AURKB', 'AXIN1', 'AXL', 'BACE1', 'BAG1', 'BAG2', 'BAIAP2L1', 'BAK1', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2A1', 'BCL2L11', 'BCL2L12', 'BCL2L14', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BID', 'BIRC3', 'BIRC5', 'BIRC6', 'BLM', 'BMF', 'BMI1', 'BMX', 'BNIP3L', 'BNIP3', 'BRCA1', 'BRCA2', 'BRCC3', 'BRD1', 'BRD4', 'BRD7', 'BRE', 'BRIP1', 'BRPF1', 'BRPF3', 'BTG2', 'BTK', 'BUB1B', 'BUB1', 'RHNO1', 'RGCC', 'RMI2', 'CNOT11', 'SETD9', 'CA9', 'CABIN1', 'CABLES1', 'CAPN1', 'CARM1', 'CASP10', 'CASP1', 'CASP2', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBX2', 'CBX4', 'CBX6', 'CBX8', 'CCDC106', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNG2', 'CCNH', 'CCNK', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CD24', 'CD274', 'CD34', 'CD40LG', 'CD40', 'CD44', 'CD82', 'CDC20', 'CDC25A', 'CDC25C', 'CDH17', 'CDH1', 'CDK12', 'CDK13', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CEACAM5', 'CEBPB', 'CENPJ', 'CFL1', 'CFLAR', 'CHD3', 'CHD4', 'CHD8', 'CHEK1', 'CHEK2', 'CHUK', 'CISH', 'CITED2', 'CLSPN', 'CLU', 'CNOT10', 'CNOT1', 'CNOT2', 'CNOT3', 'CNOT4', 'CNOT6L', 'CNOT6', 'CNOT7', 'CNOT8', 'COPS5', 'CREB1', 'CREBBP', 'CRYAB', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK1G1', 'CSNK1G2', 'CSNK1G3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTCF', 'CTGF', 'CTNNB1', 'CUL4A', 'CUL7', 'CUL9', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP1A1', 'DACH1', 'DAPK1', 'DAP', 'DAXX', 'DDB1', 'DDB2', 'DDIT4', 'DDX17', 'DDX3X', 'DDX5', 'DECR1', 'DGCR8', 'DHCR24', 'DHFR', 'DIABLO', 'DICER1', 'DKK1', 'DMTF1', 'DNA2', 'DNAJA3', 'DNAJB1', 'DNMT1', 'DNMT3A', 'DNTT', 'DPYD', 'DRAM1', 'DTL', 'DUSP1', 'DUSP2', 'DYRK1A', 'DYRK2', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EEF1A1', 'EEF1A2', 'EGFR', 'EGF', 'EGR1', 'EHMT1', 'EHMT2', 'EI24', 'EIF2AK2', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4EBP1', 'ELANE', 'ELAVL1', 'ELL3', 'ELL', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHA3', 'EPHB2', 'ERBB2', 'ERBB4', 'ERCC1', 'ERCC2', 'ERCC3', 'ERCC6', 'ESR1', 'ETS1', 'ETS2', 'EWSR1', 'EXO1', 'EZH2', 'F2', 'FADD', 'AMER1', 'FAM175B', 'FANCC', 'FANCD2', 'FASLG', 'FAS', 'FBL', 'FBXO11', 'FBXO4', 'FBXW7', 'FGF1', 'FGF2', 'FGFR3', 'FHIT', 'FHL2', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FSCN1', 'FUT4', 'FZR1', 'G3BP1', 'G6PD', 'GADD45A', 'GADD45B', 'GADD45G', 'GAPDH', 'GATAD2A', 'GATAD2B', 'GDF15', 'GFI1', 'GLS2', 'GLTSCR2', 'GNL3', 'GRAMD4', 'GRB10', 'GRB14', 'GSK3B', 'GSTP1', 'GTF2H1', 'GTSE1', 'H1F0', 'H2AFX', 'HAMP', 'HCK', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC5', 'HDAC7', 'HDAC8', 'HDAC9', 'HERC5', 'HIC1', 'HIF1A', 'HIPK1', 'HIPK2', 'HIPK3', 'HIPK4', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HK2', 'HMGA1', 'HMGA2', 'HMGB1', 'HMGB2', 'HMMR', 'HMOX1', 'HNF4A', 'HNRNPK', 'HNRNPL', 'HOXA5', 'HPGDS', 'HRAS', 'HSF1', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA1A', 'HSPA1B', 'HSPA1L', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'HSPB1', 'HSPB2', 'HTT', 'HUS1', 'HUWE1', 'ICAM1', 'ID2', 'ID4', 'IDH1', 'IDH2', 'IFI16', 'IFNAR1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IGFBP7', 'IKBKB', 'IL17A', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING2', 'ING3', 'ING4', 'ING5', 'INSIG1', 'INS', 'IRF1', 'ISG15', 'ITPKB', 'JAG1', 'JAK2', 'JMY', 'JUN', 'KAT2A', 'KAT2B', 'KAT5', 'KDM1A', 'KDM6A', 'KDM6B', 'KDR', 'KHDRBS1', 'CCAR2', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KPNA2', 'KRAS', 'KRT14', 'KRT17', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'L3MBTL1', 'LAMA4', 'LEP', 'LGALS7B', 'LGALS7', 'LIF', 'LIG4', 'LIN28A', 'PIDD1', 'LRRK2', 'LYN', 'MAF1', 'MAF', 'MAGEA2', 'MAP1LC3B', 'MAP2K1', 'MAP2K3', 'MAP2K7', 'MAP3K1', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MBD3', 'MCL1', 'MCM7', 'MDC1', 'MDH1', 'MDM2', 'MDM4', 'MEAF6', 'MECOM', 'MELK', 'MET', 'MGMT', 'MIF', 'MKI67', 'MKRN1', 'MLH1', 'KMT2D', 'KMT2C', 'MMP13', 'MMP1', 'MMP2', 'MMP9', 'MOV10', 'MRE11A', 'MSH2', 'MSH6', 'MSX1', 'MT1A', 'MT2A', 'MTA1', 'MTA2', 'MTA3', 'MTOR', 'MUC1', 'MUTYH', 'MYBBP1A', 'MYB', 'MYCN', 'MYC', 'MYOCD', 'KAT8', 'KAT6A', 'NANOG', 'NBN', 'NCL', 'NCOA3', 'NCOR1', 'NCOR2', 'NDN', 'NDRG1', 'NEDD8', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFE2L2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NFKBIB', 'NFYA', 'NFYB', 'NFYC', 'NGFR', 'NKX2-1', 'NLK', 'NLRC4', 'NME1', 'NOC2L', 'NOS3', 'NOTCH1', 'NOTCH3', 'NOTCH4', 'NOX4', 'NPM1', 'NQO1', 'NR1I2', 'NR2E1', 'NR3C1', 'NR4A1', 'NR4A2', 'NRAS', 'NUAK1', 'NUMB', 'NUPR1', 'OGG1', 'OLIG2', 'OPN1SW', 'OSGIN1', 'OTUB1', 'OTUB2', 'OTUD5', 'PADI4', 'PALB2', 'PARK2', 'PARK7', 'PARP1', 'PATZ1', 'PAX2', 'PAX3', 'PAX8', 'PBK', 'PBRM1', 'PCBP4', 'PCNA', 'PDCD4', 'PDCD5', 'PDGFRA', 'PDGFRB', 'PDLIM7', 'PER2', 'PERP', 'PGR', 'PHB', 'PHC1', 'PHC2', 'PHC3', 'PHF20', 'PHGDH', 'PI3', 'PIAS1', 'PIAS2', 'PIAS4', 'PIK3CA', 'PIN1', 'PKM', 'PLAGL1', 'PLAU', 'PLK1', 'PLK2', 'PLK3', 'PLK4', 'PMAIP1', 'PML', 'PMS2', 'POLI', 'POLK', 'POU4F1', 'POU4F2', 'POU5F1', 'PPARGC1A', 'PPARG', 'PPIF', 'PPM1D', 'PPP1R13B', 'PPP1R13L', 'PPP1R15A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R4', 'PPP2R5C', 'PRDM1', 'PRDM2', 'PRDX1', 'PRELID1', 'PRIMA1', 'PRKAA1', 'PRKAA2', 'PRKAB1', 'PRKAB2', 'PRKAG1', 'PRKAG2', 'PRKAG3', 'PRKCA', 'PRKCD', 'PRKCZ', 'PRKD1', 'PRKDC', 'PRKG1', 'PRMT1', 'PRMT5', 'PROM1', 'PSEN1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTBP1', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2', 'PTTG1', 'RABGGTA', 'RABGGTB', 'RAD17', 'RAD1', 'RAD50', 'RAD51', 'RAD9A', 'RAD9B', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP4', 'RBBP6', 'RBBP7', 'RBBP8', 'RBL1', 'RBL2', 'RBM38', 'RBPJ', 'RCHY1', 'RCOR1', 'RECQL4', 'RELA', 'REM1', 'REST', 'RET', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RFFL', 'RFWD2', 'RING1', 'RMI1', 'DROSHA', 'RNF20', 'RNF2', 'RNF34', 'RNF43', 'ROCK1', 'RPA1', 'RPA2', 'RPA3', 'RPL11', 'RPL22', 'RPL26', 'RPL5', 'RPRM', 'RPS14', 'RPS19', 'RPS27A', 'RPS27L', 'RPS3', 'RPS6KB1', 'RQCD1', 'RRAD', 'RRM2B', 'RRM2', 'RUNX2', 'RUNX3', 'S100A2', 'S100A4', 'S100A6', 'S100B', 'SALL4', 'SCO2', 'SDHC', 'SENP1', 'SENP3', 'SERPINB5', 'SERPINE1', 'SESN1', 'SESN2', 'SESN3', 'SETD2', 'SETD7', 'SETD8', 'SETDB1', 'SFN', 'SRSF1', 'SGK1', 'SHFM1', 'SHH', 'SHISA5', 'SIK1', 'SIN3A', 'SIN3B', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SKP2', 'SLC2A14', 'SLC2A1', 'SLC2A2', 'SLC2A3', 'SLC6A6', 'SLMO1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMG1', 'SMG7', 'SMYD2', 'SNAI1', 'SNAI2', 'SOCS1', 'SOCS3', 'SOD2', 'SORT1', 'SOX2', 'SOX4', 'SP100', 'SP1', 'SP3', 'SP7', 'SPATA18', 'SPP1', 'SQSTM1', 'SRC', 'SREBF1', 'SREBF2', 'SSRP1', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STEAP3', 'STK11', 'STMN1', 'STUB1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUMO4', 'SUPT16H', 'SUV39H1', 'SUZ12', 'SYK', 'SYP', 'TADA3', 'TAF10', 'TAF11', 'TAF12', 'TAF13', 'TAF15', 'TAF1L', 'TAF1', 'TAF2', 'TAF3', 'TAF4B', 'TAF4', 'TAF5', 'TAF6', 'TAF7L', 'TAF7', 'TAF9B', 'TBPL1', 'TBPL2', 'TBP', 'TCHP', 'TCP1', 'TDG', 'TERT', 'TET2', 'TFAM', 'TFAP2A', 'TFAP2C', 'TFDP1', 'TFF1', 'TGFB1', 'TGM2', 'THBS1', 'TIMP3', 'TLR3', 'TLR9', 'TMEM219', 'TNFAIP3', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF10C', 'TNFRSF10D', 'TNF', 'TNK2', 'TNKS1BP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOE1', 'TOP1', 'TOP2A', 'TOP3A', 'TOPBP1', 'TOPORS', 'TP53AIP1', 'TP53BP1', 'TP53BP2', 'TP53I3', 'TP53INP1', 'TP53RK', 'TP63', 'TP73', 'TPT1', 'TPX2', 'TRAF6', 'TRIAP1', 'TRIM24', 'TRIM28', 'TRIM29', 'TRIM32', 'TRIM59', 'TRIM8', 'TRRAP', 'TSC2', 'TTC5', 'TTK', 'TWIST1', 'TWIST2', 'TXN', 'TYMS', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2D1', 'UBE2E1', 'UBE2I', 'UBE2K', 'UBE2N', 'UBE2Q1', 'UBE2S', 'UBE3A', 'UBN1', 'UCHL1', 'UHRF1', 'USF1', 'USP10', 'USP15', 'USP24', 'USP3', 'USP42', 'USP7', 'UTP14A', 'VEGFA', 'VHL', 'VPRBP', 'VRK1', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WWOX', 'XAF1', 'XIAP', 'XPA', 'XPO1', 'XRCC1', 'XRCC5', 'XRCC6', 'YBX1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'YY1', 'YY2', 'ZBTB33', 'ZBTB7A', 'ZEB1', 'ZEB2', 'ZKSCAN4', 'ZNF148', 'ZNF274', 'ZNF385A', 'ZNF420', 'ZNF668', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.049288233308574e-15 NRMSE: 4.924989745995131e-16 MAPE: 8.115173408207329e-12 Pearson Correlation: 0.3235404636648551 Spearman Correlation: 0.18011446526764677 Coefficient of Determination: -1.479154885192973 RMSE: 0.6777552100286949 NRMSE: 0.2527343615513705 MAPE: 876.4695823156533 Predictor: ElasticNet Pearson Correlation: 0.4636837276755177 Spearman Correlation: 0.42764692503164037 Coefficient of Determination: 0.17264053751983166 RMSE: 0.4094194665618723 NRMSE: 0.09839448847918104 MAPE: 610.0286851880932 Pearson Correlation: 0.39125305422362705 Spearman Correlation: 0.4363271362485816 Coefficient of Determination: 0.12118992798074935 RMSE: 0.40352323587963707 NRMSE: 0.15047348346737954 MAPE: 301.18492380424783 Predictor: RandomForests Pearson Correlation: 0.6795584244288518 Spearman Correlation: 0.5702024849768648 Coefficient of Determination: 0.3851315961900421 RMSE: 0.35294940755893545 NRMSE: 0.08482321738979463 MAPE: 572.04274768233 Pearson Correlation: 0.501519972170205 Spearman Correlation: 0.44336268951354246 Coefficient of Determination: 0.23124377899961557 RMSE: 0.37741169727490764 NRMSE: 0.1407365121527498 MAPE: 398.6003610153303 Protein: CTNNB1 Protein Interaction Partners Count: 992 x_train_column_count: 984 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACAN', 'ACP1', 'ACTA1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTN4', 'ACVR1B', 'ACVR1', 'ADAM10', 'ADCY7', 'ADIPOQ', 'AES', 'AFP', 'AHI1', 'AHR', 'AHSA1', 'AJAP1', 'AK9', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'ALPL', 'AMHR2', 'AMH', 'ANXA5', 'AP1M1', 'APC2', 'APCS', 'APC', 'APH1A', 'APH1B', 'AQP1', 'ARHGAP10', 'ARHGAP21', 'ARHGAP32', 'ARHGEF4', 'ARID1A', 'ARID2', 'ARMC7', 'ARMC8', 'ARVCF', 'ARX', 'AR', 'ASCL1', 'ASF1A', 'ASH2L', 'ASIP', 'ATF4', 'ATM', 'AURKA', 'AXIN1', 'AXIN2', 'BAG3', 'BCAR1', 'BCL2L1', 'BCL3', 'BCL6', 'BCL9L', 'BCL9', 'BDNF', 'BGLAP', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BMPR1B', 'BNIP2', 'BRAF', 'BRCA1', 'BRCA2', 'BRMS1L', 'BTRC', 'HILPDA', 'AK8', 'CA2', 'CA9', 'CABLES1', 'CACYBP', 'CALM1', 'CALM3', 'CARM1', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBLL1', 'CBL', 'CBY1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CD24', 'CD34', 'CD40', 'CD44', 'CDC27', 'CDC42', 'CDC73', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH16', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH26', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDHR5', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK8', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDON', 'CDX1', 'CDX2', 'CEBPA', 'CHD8', 'CHRD', 'CHUK', 'CITED1', 'CKAP5', 'CLCA1', 'CLDN3', 'CLDN5', 'COL1A1', 'COPS3', 'COPS5', 'COPS6', 'CREB1', 'CREBBP', 'CRKL', 'CRK', 'CRP', 'CRYAB', 'CSNK1A1L', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK2A3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNAL1', 'CTNNBIP1', 'CTNND1', 'CTNND2', 'CTTN', 'CUL1', 'CUL4A', 'CUL4B', 'CXCR4', 'CXXC4', 'DAB2', 'DACT1', 'DACT2', 'DACT3', 'DCT', 'DCX', 'DDB1', 'DDX39A', 'DDX3X', 'DDX5', 'DHODH', 'DHX9', 'DKK1', 'DKK2', 'DKK3', 'DKK4', 'DLG1', 'DLG2', 'DLG4', 'DLG5', 'DLGAP1', 'DLL4', 'DLX1', 'DNM2', 'DNMT1', 'DPYD', 'DSC1', 'DSC2', 'DSC3', 'DSG1', 'DSG2', 'DSG3', 'DSG4', 'DSP', 'DUSP6', 'DVL1', 'DVL2', 'DVL3', 'E2F3', 'ECM1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'ELAVL1', 'EMD', 'ENAH', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHB2', 'EPHB3', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EXOC3', 'EXOC4', 'EYA4', 'EZH2', 'EZR', 'F2RL2', 'FAF1', 'AMER1', 'FANCA', 'FASLG', 'FAS', 'FAT1', 'FAT4', 'FBXW11', 'FBXW7', 'FERMT2', 'FER', 'FGF10', 'FGF13', 'FGF2', 'FGF3', 'FGF4', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FLT3', 'FMN1', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC2', 'FOXG1', 'FOXL1', 'FOXL2', 'FOXM1', 'FOXN3', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FRAT1', 'FRAT2', 'FRZB', 'FSCN1', 'FSTL1', 'FSTL3', 'FURIN', 'FUS', 'FXR1', 'FYN', 'FZD10', 'FZD1', 'FZD2', 'FZD3', 'FZD4', 'FZD5', 'FZD6', 'FZD7', 'FZD8', 'FZD9', 'GAPDH', 'GATA2', 'GATA4', 'GCG', 'GDF2', 'GDNF', 'GFRA1', 'GJA1', 'GLI1', 'GLI2', 'GLI3', 'GLIS2', 'GLUL', 'GNA11', 'GNA12', 'GNA13', 'GNAQ', 'GNAS', 'GPC3', 'GRIA2', 'GRIP1', 'GSK3A', 'GSK3B', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HAS2', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC7', 'HERC5', 'HES7', 'HGF', 'HGS', 'HHEX', 'HIC1', 'HIF1A', 'HINT1', 'HIPK2', 'HIST1H1C', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HMGB1', 'HNF1A', 'HNF4A', 'HNRNPA1', 'HNRNPA2B1', 'HNRNPK', 'HNRNPM', 'HOXA10', 'HOXB4', 'HPGD', 'HRAS', 'HSP90AB1', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPD1', 'HTRA1', 'HTT', 'HUWE1', 'IBSP', 'IDH1', 'IDH2', 'IFNB1', 'IFRD1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP4', 'IHH', 'IKBKB', 'IL6', 'CXCL8', 'ILK', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IRF3', 'ISG15', 'ISL1', 'ITGAE', 'ITGB1', 'ITGB7', 'ITK', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'AJUBA', 'JUN', 'JUP', 'KANK1', 'KAT2A', 'KAT2B', 'KAT5', 'KCNN1', 'KCTD1', 'KDM1A', 'KDR', 'KIF18B', 'KIF3A', 'KIF5B', 'KIFC3', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KRAS', 'KREMEN1', 'KRIT1', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LATS2', 'LDB1', 'LDHB', 'LDLR', 'LEF1', 'LEO1', 'LGR4', 'LGR5', 'LGR6', 'LHCGR', 'LHX8', 'LIF', 'LIMA1', 'LMNA', 'LMNB1', 'LOX', 'LRP4', 'LRP5L', 'LRP5', 'LRP6', 'LRRFIP1', 'LRRK2', 'LZTFL1', 'MACF1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8IP1', 'MAPK8', 'MAPK9', 'MDFIC', 'MDFI', 'MDK', 'MDM2', 'MED12', 'MED1', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'KMT2D', 'MLLT10', 'MLLT11', 'MLLT4', 'MLLT6', 'KMT2A', 'MME', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP25', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MRAP', 'MSH2', 'MSH6', 'MSN', 'MSX1', 'MSX2', 'MTDH', 'MTOR', 'MUC13', 'MUC1', 'MUTYH', 'MYCN', 'MYC', 'MYF5', 'MYO1D', 'MYO6', 'MYO7A', 'MYOD1', 'MYOG', 'NANOG', 'NCAM1', 'NCCRP1', 'NCOA2', 'NCSTN', 'NDP', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEURL2', 'NF1', 'NF2', 'NFAT5', 'NFKB1', 'NIT1', 'NKD1', 'NKX2-5', 'NLK', 'NME1', 'NOG', 'NONO', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR0B1', 'NR4A1', 'NR4A2', 'NR5A1', 'NR5A2', 'NRAS', 'NRIP1', 'NTRK1', 'NTRK2', 'NTRK3', 'NUDT5', 'NUMB', 'NUP153', 'NUTF2', 'OTX2', 'PAK1', 'PAK2', 'PAK3', 'PANK4', 'PARD3', 'PARD6A', 'PARK2', 'PARP1', 'PAX3', 'PAX6', 'PAX7', 'PAX8', 'PDGFRA', 'PDGFRB', 'PECAM1', 'PGK1', 'PGR', 'PHB', 'JADE1', 'PI3', 'PICK1', 'PIK3CA', 'PIK3R1', 'PIK3R2', 'PIN1', 'PIP5K1A', 'PIP5K1C', 'PITX2', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAG1', 'PLEKHA7', 'PLK1', 'PML', 'PMS2', 'POLE', 'PORCN', 'POTEF', 'POU5F1', 'PPARD', 'PPARG', 'PPM1A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R2B', 'PPP2R5A', 'PPP2R5B', 'PPP2R5C', 'PPP2R5D', 'PPP2R5E', 'PRKACA', 'PRKACB', 'PRKACG', 'PRKAR1A', 'PRKCA', 'PRKCG', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRL', 'PRMT1', 'PROC', 'PROM1', 'PROP1', 'PSEN1', 'PSEN2', 'PSENEN', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTEN', 'PTGES3', 'PTGS2', 'PTH1R', 'PTH', 'PTK2', 'PTK7', 'PTMA', 'PTN', 'PTPN11', 'PTPN13', 'PTPN1', 'PTPN6', 'PTPRB', 'PTPRC', 'PTPRF', 'PTPRG', 'PTPRJ', 'PTPRK', 'PTPRM', 'PTPRU', 'PTPRZ1', 'PVRL1', 'PVRL2', 'PXN', 'PYGO1', 'PYGO2', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RALGDS', 'RANBP3', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RAPGEF2', 'RAPGEF6', 'RAPSN', 'RARA', 'RARB', 'RARG', 'RARS', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP5', 'RBMX', 'RBPJ', 'RBX1', 'RELA', 'REM1', 'RET', 'RHOA', 'RIPK2', 'RNF220', 'RNF43', 'ROBO1', 'ROCK1', 'ROCK2', 'ROR2', 'RPRD1A', 'RPS27A', 'RPSA', 'RSPO1', 'RSPO2', 'RSPO3', 'RSPO4', 'RUNX2', 'RUNX3', 'RUVBL1', 'RUVBL2', 'RXRA', 'RYK', 'S100A4', 'S100A6', 'SALL1', 'SALL4', 'SATB1', 'SCRIB', 'SDHC', 'SERPINE1', 'SETD2', 'SETD7', 'SFN', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHFM1', 'SHH', 'SIAH1', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT6', 'SKP1', 'SLC6A3', 'SLC9A3R1', 'SLCO1B3', 'SLCO2A1', 'SLIT1', 'SLK', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD5', 'SMAD7', 'SMAD9', 'SMARCA2', 'SMARCA4', 'SMARCA5', 'SMARCB1', 'SMO', 'SMURF1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNX1', 'SOST', 'SOX10', 'SOX13', 'SOX17', 'SOX1', 'SOX2', 'SOX3', 'SOX4', 'SOX6', 'SOX7', 'SOX8', 'SOX9', 'SP1', 'SP7', 'SPAG9', 'SPATA13', 'SPEN', 'SPN', 'SPP1', 'SRC', 'STAT3', 'STK11', 'STRAP', 'STX4', 'SUFU', 'SUV39H1', 'SYP', 'TADA3', 'TAX1BP3', 'TAZ', 'TBL1XR1', 'TBL1X', 'TBX5', 'TBX6', 'TCF12', 'TCF3', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TFAP2A', 'TFCP2', 'TFF1', 'TFF2', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBR1', 'TGFBR2', 'TGM2', 'TJP1', 'TJP2', 'TLE1', 'TLE2', 'TLE3', 'TLE4', 'TNFRSF11B', 'TNFSF11', 'TNF', 'TNIK', 'TNKS2', 'TNKS', 'TNS1', 'TOB1', 'TOP2A', 'TP53', 'TRAF4', 'TRIM33', 'TRIM37', 'TRIP10', 'TRRAP', 'TSC2', 'TUBA1A', 'TWIST1', 'TYMS', 'T', 'UBA52', 'UBB', 'UBC', 'UBE2B', 'UBE2R2', 'UBE3A', 'UBR5', 'UCHL1', 'UMPS', 'UPRT', 'USP4', 'USP7', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VAV2', 'VAV3', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VHL', 'VIM', 'WDR64', 'WDTC1', 'WHSC1', 'WIF1', 'WISP1', 'WLS', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'WWTR1', 'XPO1', 'YAP1', 'YARS', 'YEATS4', 'YES1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'ZAP70', 'ZAR1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZIC3', 'ZNRF3', 'ZYX', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.9999999999999994 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.4421764449533118e-15 NRMSE: 6.770606697390465e-16 MAPE: 1.85418915368843e-12 Pearson Correlation: 0.20043982539854474 Spearman Correlation: 0.16643349667701596 Coefficient of Determination: -2.4748301812069093 RMSE: 1.1426317179641927 NRMSE: 0.3735433384432942 MAPE: 1066.6348634439719 Predictor: ElasticNet Pearson Correlation: 0.5438091550813281 Spearman Correlation: 0.5227450458491204 Coefficient of Determination: 0.1829580536665738 RMSE: 0.6952804325115367 NRMSE: 0.13675854298023932 MAPE: 369.6127184743844 Pearson Correlation: 0.28762301379149907 Spearman Correlation: 0.27531764735221137 Coefficient of Determination: 0.0718848290197609 RMSE: 0.590527896800833 NRMSE: 0.19305237072177348 MAPE: 2034.9602733902889 Predictor: RandomForests Pearson Correlation: 0.6759799490124614 Spearman Correlation: 0.6672207497533661 Coefficient of Determination: 0.4499730499716307 RMSE: 0.5704660652230691 NRMSE: 0.1122081166843173 MAPE: 245.27036742599236 Pearson Correlation: 0.44935709301694193 Spearman Correlation: 0.3349692639559097 Coefficient of Determination: 0.18377873651508103 RMSE: 0.5537878651614647 NRMSE: 0.18104150680357797 MAPE: 1039.8099966064203 Protein: CCNE1 Protein Interaction Partners Count: 350 x_train_column_count: 347 x_train columns: ['ABL1', 'AKT1', 'AKT2', 'AKT3', 'ALDH18A1', 'ANAPC10', 'ANAPC13', 'ANAPC1', 'ANAPC2', 'ANAPC4', 'ANAPC5', 'ANAPC7', 'ANXA5', 'ARID1A', 'AR', 'ATM', 'AURKA', 'AURKB', 'BARD1', 'BCL2L1', 'BIRC5', 'BRCA1', 'BRCA2', 'BTG2', 'BTRC', 'BUB1B', 'BUB1', 'BUB3', 'RGCC', 'MLIP', 'CABLES1', 'CALM1', 'CAPRIN1', 'CASP3', 'CASP9', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNF', 'CCNG1', 'CCNH', 'CCNK', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CDC16', 'CDC20', 'CDC23', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC26', 'CDC27', 'CDC45', 'CDC6', 'CDC7', 'CDCA2', 'CDCA5', 'CDCA8', 'CDH1', 'CDK12', 'CDK13', 'CDK14', 'CDK15', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CENPA', 'CENPE', 'CHAF1A', 'CHD1L', 'CHEK1', 'CHEK2', 'CINP', 'CKS1B', 'CKS2', 'COPS5', 'CREBBP', 'CSK', 'CTNNB1', 'CUL1', 'CUL3', 'CUL4B', 'DBF4B', 'DBF4', 'DGCR8', 'DICER1', 'DTL', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'EBNA1BP2', 'ECT2', 'EGFR', 'EGF', 'ELAVL1', 'ELSPBP1', 'EP400', 'ERBB2', 'ERBB3', 'ERBB4', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM58A', 'FAM83H', 'FBXO5', 'FBXW7', 'FEN1', 'FGFR1', 'FGFR2', 'FGFR3', 'FOXM1', 'FZR1', 'GAPDH', 'GLI1', 'GMNN', 'GSK3B', 'H1F0', 'HDAC1', 'HEATR3', 'HERC5', 'HIST1H1A', 'HIST1H1B', 'HIST1H4A', 'HRAS', 'IFNAR1', 'IGF1R', 'IGF1', 'ITPKB', 'JUN', 'KIF11', 'KIF20A', 'KIF23', 'KIF2C', 'KPNA2', 'KRAS', 'LATS2', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'GMNC', 'MAD2L1', 'MAPK3', 'MATK', 'MAX', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDM2', 'MEGF11', 'MELK', 'MKI67', 'KMT2D', 'KMT2B', 'MNAT1', 'MRE11A', 'MTOR', 'MYBL2', 'MYC', 'NBN', 'NF1', 'NFYB', 'NMI', 'NOTCH1', 'NOTCH3', 'NPAT', 'NRAS', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PARK2', 'PARP1', 'PCBP4', 'PCNA', 'PIK3CA', 'PIK3R1', 'PKMYT1', 'PLK1', 'PLK4', 'POLA1', 'POLD1', 'PPP1R1C', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R4', 'PRC1', 'PRKAR1A', 'PRKAR2A', 'PRMT5', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB10', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSMF1', 'PTEN', 'PTGDR', 'PTK6', 'PTTG1', 'RAD51', 'RAD54L', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RBX1', 'REL', 'REM1', 'RHOA', 'RHOBTB3', 'RINT1', 'RNASE1', 'RPRD1A', 'RPS27A', 'RRM1', 'RRM2', 'RRN3', 'RSF1', 'SHFM1', 'SKP1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'ST8SIA1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STK3', 'STK4', 'TARBP1', 'TCP1', 'TERF1', 'TERT', 'TFDP1', 'TK1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TPX2', 'TTK', 'TUBG1', 'TYMS', 'UBA52', 'UBB', 'UBC', 'UBE2C', 'UBE2QL1', 'UBE2S', 'UHRF2', 'WEE1', 'WEE2', 'XIAP', 'YAP1', 'ZNF217', 'ZNF33A', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.9634512426452686 Spearman Correlation: 0.877580012336347 Coefficient of Determination: 0.9282382969547128 RMSE: 0.13994862668361904 NRMSE: 0.03377383176475591 MAPE: 23.608953704564858 Pearson Correlation: 0.46929199860390514 Spearman Correlation: 0.29576179254105417 Coefficient of Determination: -0.7862742529956417 RMSE: 0.48767939097050655 NRMSE: 0.21243167267957772 MAPE: 116.86575662802576 Predictor: ElasticNet Pearson Correlation: 0.6977791076677385 Spearman Correlation: 0.6138306757131154 Coefficient of Determination: 0.4076310647895319 RMSE: 0.40208549859840864 NRMSE: 0.09703537867085181 MAPE: 74.448157478955 Pearson Correlation: 0.5528122119176146 Spearman Correlation: 0.5015598698238134 Coefficient of Determination: 0.2985789165957835 RMSE: 0.3055974609938828 NRMSE: 0.13311733283699212 MAPE: 72.34435286176331 Predictor: RandomForests Pearson Correlation: 0.8640709868805985 Spearman Correlation: 0.7271815999793318 Coefficient of Determination: 0.7426045372181613 RMSE: 0.2650468921819653 NRMSE: 0.06396382271447386 MAPE: 55.659360733982865 Pearson Correlation: 0.7733595740913468 Spearman Correlation: 0.6680465876852942 Coefficient of Determination: 0.544739912409206 RMSE: 0.24620117572034597 NRMSE: 0.10724449001191182 MAPE: 78.93821153688324 Protein: CCND1 Protein Interaction Partners Count: 857 x_train_column_count: 849 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTL6B', 'AFP', 'AHR', 'AKAP12', 'AKAP8', 'AKR1B10', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDOA', 'ALK', 'ANO1', 'ANXA5', 'APAF1', 'APC', 'APEX1', 'AREG', 'ARHGEF2', 'ARID1A', 'ARID1B', 'ARID2', 'ARID4A', 'AR', 'ASIP', 'ATF2', 'ATF3', 'ATF4', 'ATM', 'ATXN1', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'B2M', 'BANP', 'BARX2', 'BAX', 'BCAR1', 'BCAR3', 'BCCIP', 'BCL2A1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL3', 'BCL6', 'BCL9', 'BECN1', 'BGLAP', 'BHLHE40', 'BIRC2', 'BIRC3', 'BIRC5', 'BMI1', 'BMP4', 'BMP6', 'BRAF', 'BRCA1', 'BRCA2', 'BRD2', 'BRD4', 'BTC', 'BTG2', 'BTRC', 'RGCC', 'COPRS', 'CA9', 'CARD11', 'CARM1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBFB', 'CCDC62', 'CCL2', 'CCL5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNC', 'CCND2', 'CCND3', 'CCNDBP1', 'CCNE1', 'CCNE2', 'CCNG2', 'CCNH', 'CCNK', 'CCNL1', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CD19', 'CD22', 'CD24', 'CD34', 'CD38', 'CD44', 'CD5', 'CD79A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC6', 'CDC73', 'CDCA7L', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK12', 'CDK13', 'CDK14', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK20', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CDX2', 'CENPE', 'CEP57', 'CFLAR', 'CHEK1', 'CHEK2', 'CHKA', 'CHUK', 'CKS1B', 'CKS2', 'CLCN3', 'COL1A1', 'CR2', 'CREB1', 'CREBBP', 'CRKL', 'CRYAB', 'CSF2', 'CTBP1', 'CTGF', 'CTNNB1', 'CTNND1', 'CTTN', 'CUL1', 'CUL3', 'CUL7', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'CYR61', 'DACH1', 'DAXX', 'DDIT3', 'DDX53', 'DECR1', 'DHFR', 'DICER1', 'DKK1', 'DKK3', 'DLL1', 'DMTF1', 'DND1', 'DNMT1', 'DNMT3A', 'DNTT', 'DVL1', 'DVL2', 'DYRK1A', 'DYRK1B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EDN1', 'EEF1A1', 'EGFR', 'EGF', 'EGLN2', 'EGR1', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF3I', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4E', 'EIF4G1', 'ELAVL1', 'ELSPBP1', 'EP300', 'EPCAM', 'EPHA2', 'EPHA7', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EWSR1', 'EYA1', 'EZH2', 'FABP4', 'FADD', 'FAM58A', 'FAM83H', 'FASLG', 'FAT1', 'FBXO31', 'FBXO4', 'FBXW7', 'FBXW8', 'FGF13', 'FGF19', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FHL2', 'FIGF', 'FLCN', 'FLNA', 'FLT1', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXC1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FRZB', 'FSTL3', 'FZD1', 'FZD2', 'FZD7', 'FZD9', 'FZR1', 'GADD45A', 'GAL', 'GAPDH', 'GAST', 'GATA3', 'GATA4', 'GDF15', 'GDF2', 'GGNBP2', 'GGT1', 'GIT1', 'GJA1', 'GJB1', 'GLI1', 'GLI2', 'GLI3', 'GLTSCR2', 'GNB2L1', 'GPER1', 'GRB2', 'GREB1', 'GRM4', 'GRP', 'GSK3B', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HBEGF', 'HBZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC4', 'HEXIM1', 'HEY1', 'HGF', 'HIF1A', 'HIST1H2AA', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AH', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AC', 'HIST2H2BE', 'HIST2H4A', 'HIST4H4', 'HMGA2', 'HMOX1', 'HNF1A', 'HNF4A', 'HNRNPD', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB8', 'ICAM1', 'ID1', 'ID2', 'IFNAR1', 'IFNB1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP3', 'IGFBP5', 'IHH', 'IKBKB', 'IL10', 'IL17A', 'IL2', 'IL4', 'IL6', 'IL7', 'CXCL8', 'ILK', 'INSM1', 'INS', 'IRF1', 'IRS1', 'ISG15', 'ITGB1', 'ITPKB', 'ITPKC', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUNB', 'JUND', 'JUN', 'KAT2A', 'KAT2B', 'KDM1A', 'KDM5B', 'KDR', 'KHDRBS1', 'KIF18B', 'KIN', 'KITLG', 'KIT', 'KLF13', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KRAS', 'KRT10', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LDB3', 'LEF1', 'LEP', 'LGALS3', 'LGR5', 'LIMK2', 'LIMS1', 'LIN28B', 'LMNA', 'LMNB1', 'LOX', 'LRP5', 'LRP6', 'LYN', 'MAFB', 'MAF', 'MAML1', 'MAML2', 'MAML3', 'MAMLD1', 'MAP2K1', 'MAP2K2', 'MAP2K4', 'MAP2K7', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDK', 'MDM2', 'MDM4', 'MEN1', 'MET', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'MLXIPL', 'MME', 'MMP11', 'MMP14', 'MMP15', 'MMP1', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MNAT1', 'MOV10', 'MSH2', 'MST1', 'MTOR', 'MUC1', 'MYBL2', 'MYB', 'MYCN', 'MYC', 'MYEOV', 'MYF5', 'MYOD1', 'MYOG', 'NACA2', 'NADSYN1', 'NANOG', 'NCAM1', 'NCOA1', 'NCOA3', 'NCOR1', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NGF', 'NKX2-1', 'NME1-NME2', 'NME1', 'NME2', 'NMI', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NQO1', 'NR0B2', 'NR1H3', 'NR2E1', 'NR3C1', 'NR4A3', 'NRAS', 'NRF1', 'NUDT21', 'ODC1', 'ORAI1', 'ORAOV1', 'ORC4', 'PAK1', 'PAK4', 'PARK2', 'PARP1', 'PAX2', 'PAX5', 'PAX6', 'PBRM1', 'PBX3', 'PCNA', 'PDCD4', 'PDGFRA', 'PDGFRB', 'PDZK1', 'PECAM1', 'PELP1', 'PGR', 'PI3', 'PI4K2A', 'PIK3CA', 'PIK3R1', 'PKLR', 'PKM', 'PLAUR', 'PLAU', 'PLK1', 'PMAIP1', 'POLR2A', 'POTEF', 'POU2F1', 'POU5F1', 'PPARG', 'PPP2R4', 'PRDM5', 'PRKACA', 'PRL', 'PRMT5', 'PRNP', 'PROM1', 'PSAT1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTCHD3', 'PTEN', 'PTF1A', 'PTGS2', 'PTHLH', 'PTH', 'PTK2', 'PTK6', 'PTPN11', 'PTPRCAP', 'PTPRC', 'PXN', 'RAD51', 'RAF1', 'RALA', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RBX1', 'RCC1', 'RELA', 'RELB', 'REL', 'REM1', 'RET', 'RHEB', 'RHOA', 'RHOC', 'RICTOR', 'RNASE1', 'DROSHA', 'RND3', 'RNMT', 'ROCK1', 'RPRD1B', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KA6', 'RPS6KB1', 'RPS6', 'RPTOR', 'RREB1', 'RSF1', 'RUNX1', 'RUNX2', 'RUNX3', 'SDC1', 'SDHC', 'SENP1', 'SERPINE1', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHC1', 'SHFM1', 'SHH', 'SIRT1', 'SIX1', 'SIX3', 'SKP1', 'SKP2', 'SLC25A16', 'SLC25A6', 'SLC2A1', 'SLC35B2', 'SLC39A4', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMO', 'SNAI1', 'SNAI2', 'SNCA', 'SNIP1', 'SNW1', 'SNX33', 'SOCS3', 'SOX11', 'SOX17', 'SOX2', 'SOX4', 'SOX6', 'SOX9', 'SP1', 'SPN', 'SPP1', 'SPRY1', 'SRC', 'SREBF1', 'STAT1', 'STAT3', 'STAT4', 'STAT5A', 'STAT5B', 'STAT6', 'STC2', 'STIM1', 'STK11', 'STK24', 'STMN1', 'SUFU', 'SULF2', 'SUV39H1', 'TAF1', 'TBP', 'TBX2', 'TCEAL7', 'TCF4', 'TCF7L2', 'TCF7', 'TERT', 'TET3', 'TFDP1', 'TFF1', 'TGFA', 'TGFB1', 'TGFBR2', 'THBS1', 'THRA', 'THRB', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLR9', 'TM4SF1', 'TMPRSS4', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF8', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP2A', 'TP53', 'TP63', 'TP73', 'TRPV2', 'TSC22D3', 'TSC2', 'TWIST1', 'TXN', 'TYMS', 'UBA52', 'UBA7', 'UBB', 'UBC', 'UBE2C', 'UBTF', 'URGCP', 'USP18', 'USP2', 'USP9X', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VIP', 'VRK1', 'WDR77', 'WDTC1', 'WEE1', 'WHSC1', 'WIF1', 'WISP1', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'XBP1', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YY1', 'ZBTB17', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.0183941617655648e-15 NRMSE: 6.122291193838987e-16 MAPE: 2.414484491396771e-12 Pearson Correlation: 0.06753448204877988 Spearman Correlation: 0.05700569832541553 Coefficient of Determination: -3.038586049097689 RMSE: 0.4214975808204716 NRMSE: 0.3993988428458128 MAPE: 847.0563162306878 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: RandomForests Pearson Correlation: 0.5772177113737843 Spearman Correlation: 0.550204785406144 Coefficient of Determination: 0.2845960696954034 RMSE: 0.2069341540942244 NRMSE: 0.12440282916775343 MAPE: 487.8931361371988 Pearson Correlation: 0.39246457786917033 Spearman Correlation: 0.3719772066983379 Coefficient of Determination: 0.14342072936184758 RMSE: 0.1941172794591912 NRMSE: 0.18393988558952287 MAPE: 348.3674372115515 Protein: ERBB2 Protein Interaction Partners Count: 663 x_train_column_count: 657 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACPP', 'ACTA2', 'ACTB', 'ACTG1', 'ADAM10', 'ADAM17', 'ADRB2', 'AFP', 'AGRN', 'AKT1S1', 'AKT1', 'AKT2', 'ALB', 'ALDH1A1', 'ALK', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'ANO1', 'ANXA2', 'ANXA5', 'AP2B1', 'APP', 'AREG', 'ARHGEF11', 'ARHGEF12', 'ARID1A', 'ARL6IP5', 'AR', 'ATM', 'ATP2B2', 'AURKB', 'AXIN1', 'BAG1', 'BARD1', 'BCAR1', 'BCAR3', 'BCAS1', 'BCL2L11', 'BCL2L1', 'BDNF', 'BECN1', 'BEST1', 'BIRC5', 'BLNK', 'BMI1', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BSG', 'BTC', 'MIEN1', 'CA9', 'CALU', 'CARTPT', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAV1', 'CBLB', 'CBLC', 'CBL', 'CCL27', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD19', 'CD22', 'CD247', 'CD24', 'CD274', 'CD28', 'CD33', 'CD34', 'CD44', 'CD46', 'CD52', 'CD68', 'CD6', 'CD80', 'CD82', 'CDC37', 'CDC42', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK4', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CEACAM5', 'CEP70', 'CHEK2', 'CHGA', 'CHKA', 'CHKB', 'CISH', 'CLDN3', 'CLDN4', 'CLDN7', 'CLTC', 'CNN1', 'COPS5', 'CPNE3', 'CREB1', 'CRKL', 'CRK', 'YBX3', 'CSF1', 'CSF2', 'CSF3', 'CSK', 'CSPG4', 'CTAG1B', 'CTLA4', 'CTNNB1', 'CTNND1', 'CTSB', 'CTSD', 'CTTN', 'CUL5', 'CXCL12', 'CXCR1', 'CXCR4', 'CYCS', 'CYP19A1', 'CYTIP', 'DCN', 'DDX41', 'DDX53', 'DHH', 'DIAPH1', 'DICER1', 'DLG4', 'DMTF1', 'DNAJA3', 'DNM2', 'DNMT1', 'DOCK1', 'DOCK7', 'DUSP6', 'E2F1', 'E2F3', 'EEA1', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EGFR', 'EGF', 'EIF3A', 'EIF4EBP1', 'EIF4E', 'ELAVL1', 'ELF3', 'EML4', 'ENO2', 'EP300', 'EPCAM', 'EPGN', 'EPHA2', 'EPS15', 'EPX', 'ERAL1', 'ERBB2IP', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ERRFI1', 'ESCO1', 'ESR1', 'ESR2', 'ESRRB', 'ETS1', 'ETS2', 'ETV4', 'ETV6', 'EZH2', 'EZR', 'FASLG', 'FASN', 'FBXW7', 'FCGR1A', 'FCGR1B', 'FCGRT', 'FGF10', 'FGF13', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FIGF', 'FLT1', 'FLT3LG', 'FN1', 'FOLH1', 'FOLR1', 'FOS', 'FOXA1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXP3', 'FREM2', 'FSIP1', 'FYN', 'GAB1', 'GABPB1', 'GAPDH', 'GATA3', 'GATA4', 'GDF2', 'GLI1', 'GLI2', 'GLS', 'GNA11', 'GNAQ', 'GNAS', 'GNRH1', 'GPER1', 'GRAP2', 'GRB2', 'GRB7', 'GSTP1', 'GZMB', 'H2AFX', 'H2AFY', 'HBEGF', 'HDAC1', 'HDAC6', 'HEATR6', 'HGF', 'HIF1A', 'HK1', 'HLA-A', 'HMGA2', 'HNF4A', 'HOXB7', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPG2', 'ICAM1', 'ID1', 'IDH1', 'IDH2', 'IFNG', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IHH', 'IL10', 'IL2', 'IL4', 'IL6R', 'IL6ST', 'IL6', 'CXCL8', 'ILK', 'INPP4B', 'INS', 'IQGAP1', 'IQSEC1', 'IRS1', 'ITGA5', 'ITGA6', 'ITGAV', 'ITGB1', 'ITGB3', 'ITGB4', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JUN', 'JUP', 'KDR', 'KITLG', 'KLK3', 'KLRK1', 'KRAS', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'L1CAM', 'LAMP1', 'LCN2', 'LDHA', 'LEP', 'LIN28A', 'LIN7A', 'LIN7B', 'LIN7C', 'LINGO1', 'LOX', 'LRIG1', 'LRPPRC', 'MAGEA1', 'MAGEA3', 'MAGED4B', 'MAGED4', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK8', 'MATK', 'MCL1', 'MDK', 'MDM2', 'MEMO1', 'MET', 'MGMT', 'MKI67', 'MLANA', 'MLH1', 'KMT2C', 'MME', 'MMP11', 'MMP14', 'MMP16', 'MMP1', 'MMP2', 'MMP7', 'MMP9', 'MPP1', 'MRAP', 'MRAS', 'MSH2', 'MSH6', 'MSLN', 'MTA1', 'MTOR', 'MUC13', 'MUC16', 'MUC1', 'MUC4', 'MUC6', 'MUCL1', 'MYBL2', 'MYCN', 'MYC', 'NANOG', 'NCAM1', 'NCL', 'NCOA1', 'NCOA3', 'NCOR1', 'NDRG1', 'NF1', 'NF2', 'NFE2L2', 'NGF', 'NISCH', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NR1H4', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NRP1', 'NTF3', 'NTF4', 'OPCML', 'OSMR', 'PA2G4', 'PADI2', 'PAK1', 'PALB2', 'PAQR3', 'PARP1', 'PAX2', 'PCSK9', 'PDCD1LG2', 'PDCD1', 'PDCD4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PDGFRA', 'PDPN', 'PECAM1', 'PELP1', 'PEPD', 'PFKFB3', 'PGAP3', 'PGF', 'PGR', 'PI3', 'PIK3C2A', 'PIK3C2B', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIN1', 'PIP', 'PLAUR', 'PLAU', 'PLCG1', 'PLCG2', 'PLEK', 'PLG', 'PLXNB1', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPP3CA', 'PRDM10', 'PRF1', 'PRKACA', 'PRL', 'PROM1', 'PSCA', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'PTPN1', 'PTPRC', 'PTPRO', 'PTPRU', 'PTS', 'PXN', 'RAB25', 'RAD51', 'RAF1', 'RANBP2', 'RARA', 'RASA1', 'RASA2', 'RASSF1', 'RB1', 'RBPJ', 'RDX', 'RECK', 'REM1', 'REN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'S100A14', 'SCGB2A2', 'SCUBE2', 'SDC1', 'SDHC', 'SEMA3D', 'SEMA4D', 'SERPINB5', 'SERPINE1', 'SFRP1', 'PEAK1', 'SH3BGRL3', 'SH3BGRL', 'SH3TC2', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SIAH2', 'PMEL', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC4A7', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SMUG1', 'SMYD3', 'SNAI1', 'SNAI2', 'SOCS1', 'SOS1', 'SOX10', 'SOX2', 'SOX9', 'SP3', 'SPP1', 'SPRY2', 'SRCIN1', 'SRC', 'STARD3', 'STAT1', 'STAT2', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STOM', 'STUB1', 'SYP', 'TAGLN', 'TBX1', 'TERT', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TFRC', 'TGFA', 'TGFB1', 'THBS1', 'THRA', 'TIMP1', 'TJP1', 'TMPRSS2', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF4', 'TNFRSF8', 'TNFRSF9', 'TNFSF11', 'TNF', 'TNS1', 'TNS3', 'TNS4', 'TOB1', 'TOP1', 'TOP2A', 'TP53', 'TP63', 'TSC2', 'TWIST1', 'TYMS', 'TYR', 'UBA52', 'UBB', 'UBC', 'USP2', 'USP9X', 'VAV1', 'VAV2', 'VAV3', 'VCL', 'VEGFA', 'VEGFB', 'VEGFC', 'VIM', 'WASL', 'WDFY2', 'WDTC1', 'WNT10A', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7B', 'WNT9A', 'WNT9B', 'WT1', 'WWOX', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YES1', 'YY1', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.9531715892479655e-15 NRMSE: 6.734878425214177e-16 MAPE: 5.308676903711331e-12 Pearson Correlation: 0.5446859416572307 Spearman Correlation: 0.499213829616505 Coefficient of Determination: -0.7238759949351001 RMSE: 1.4003307454666474 NRMSE: 0.25260313613295465 MAPE: 560.4689107512821 Predictor: ElasticNet Pearson Correlation: 0.8236277635278766 Spearman Correlation: 0.6660565086916596 Coefficient of Determination: 0.4000600131872637 RMSE: 0.7600233646823326 NRMSE: 0.12948248882946872 MAPE: 643.6344649445595 Pearson Correlation: 0.8337051493630487 Spearman Correlation: 0.650988978652333 Coefficient of Determination: 0.39549051118968637 RMSE: 0.8292379594669886 NRMSE: 0.1495847390625205 MAPE: 191.31397810448792 Predictor: RandomForests Pearson Correlation: 0.846909847073551 Spearman Correlation: 0.6820627790893955 Coefficient of Determination: 0.7100735211474967 RMSE: 0.5283442429324748 NRMSE: 0.0900121374060812 MAPE: 551.3013161115801 Pearson Correlation: 0.8508230084019966 Spearman Correlation: 0.7038602771063124 Coefficient of Determination: 0.7193829313808946 RMSE: 0.5649820563125258 NRMSE: 0.10191609356961648 MAPE: 198.11534034275425 Protein: ERBB3 Protein Interaction Partners Count: 245 x_train_column_count: 247 x_train columns: ['ADAM17', 'AGRN', 'AGTR2', 'AKT1', 'AKT2', 'AKT3', 'ALAS2', 'ALB', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'APIP', 'AREG', 'AR', 'BAMBI', 'BDNF', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BTC', 'CADM4', 'CASK', 'CASP3', 'CBLB', 'CBLC', 'CBL', 'CCND1', 'CCNE1', 'CD44', 'CD82', 'CDC42', 'CDH1', 'CDK4', 'CDK5', 'CDKN1B', 'CDKN2A', 'CLEC16A', 'COMMD5', 'COQ7', 'CRKL', 'CRK', 'CRYZL1', 'CSF1', 'CSK', 'CSPG5', 'CTNNB1', 'DCN', 'DHH', 'DOCK7', 'DUSP6', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EIF4EBP1', 'EIF4E', 'EML4', 'EPCAM', 'EPGN', 'EPN1', 'ERBB2IP', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'ESR2', 'FBXO9', 'FGF10', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FIGF', 'FKBP14', 'FLNA', 'FLT3LG', 'FN1', 'FOXA1', 'FOXO3', 'FREM2', 'FTSJ1', 'GAB1', 'GAPDH', 'GLE1', 'GRB2', 'GRB7', 'GRHL2', 'HBEGF', 'HGF', 'HGS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPG2', 'IGF1', 'IGF2', 'IL6ST', 'ILK', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'ITPKB', 'JAK1', 'JAK2', 'JUN', 'KDR', 'KITLG', 'KRAS', 'L1CAM', 'LAMA1', 'LAMB1', 'LAMC2', 'LIN7A', 'LIN7B', 'LIN7C', 'LRIG1', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARCH7', 'MDM2', 'MET', 'MITF', 'MMP9', 'MRPL49', 'MTOR', 'MUC1', 'MUC4', 'MYC', 'N4BP1', 'NDRG1', 'NEDD4L', 'NEDD4', 'NF1', 'NGF', 'NICN1', 'NOTCH1', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NTF3', 'NTF4', 'OAT', 'PA2G4', 'PARK7', 'PCSK9', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PGR', 'PI3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIP5K1C', 'PLCG1', 'PLCG2', 'PPP1R9A', 'PRKACA', 'PTEN', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN22', 'PTPN2', 'RASA1', 'RASA2', 'REM1', 'RGS4', 'RHOA', 'RHOC', 'RNF41', 'ROR1', 'RRAS2', 'SH2B3', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SLC25A16', 'SMAD4', 'SNAI2', 'SOS1', 'SOX10', 'SOX2', 'SPARC', 'SPRY2', 'SRC', 'STAT3', 'STAT5A', 'STAT5B', 'SYN3', 'TCF7L2', 'TGFA', 'TMEFF2', 'TNFRSF13C', 'TNS1', 'TP53', 'USP8', 'VAV1', 'VAV2', 'VAV3', 'VEGFA', 'VEGFB', 'VEGFC', 'WNT1', 'WNT5A', 'ZEB1', 'ZNF217', 'KRBOX4', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.7761325970082842 Spearman Correlation: 0.7743758752711548 Coefficient of Determination: 0.6023818081388239 RMSE: 0.28438971721116135 NRMSE: 0.10311933383776659 MAPE: 179.54949420662913 Pearson Correlation: 0.1534345113047084 Spearman Correlation: 0.22196037357074283 Coefficient of Determination: -0.4366416226042613 RMSE: 0.5929734235721917 NRMSE: 0.16486367514344666 MAPE: 216.1437140447033 Predictor: ElasticNet Pearson Correlation: 0.43488751555739624 Spearman Correlation: 0.43870391323891517 Coefficient of Determination: 0.0888948936176106 RMSE: 0.4304919221914941 NRMSE: 0.1560957993638185 MAPE: 228.09110609020783 Pearson Correlation: 0.36977118224974737 Spearman Correlation: 0.4279230414344319 Coefficient of Determination: 0.04704514433265228 RMSE: 0.48294443994305714 NRMSE: 0.13427245150290043 MAPE: 150.1820246142878 Predictor: RandomForests Pearson Correlation: 0.5700111679315052 Spearman Correlation: 0.598007350486268 Coefficient of Determination: 0.30672257699633665 RMSE: 0.3755210573064074 NRMSE: 0.13616343674879794 MAPE: 234.93540337334667 Pearson Correlation: 0.36952256040669623 Spearman Correlation: 0.3672639309717079 Coefficient of Determination: 0.11045540866504089 RMSE: 0.4666001440422716 NRMSE: 0.12972826691937767 MAPE: 157.5268378840568 Fold: 4 Protein: RB1 Protein Interaction Partners Count: 369 x_train_column_count: 366 x_train columns: ['AATF', 'ABCC1', 'ABL1', 'ACTL6A', 'ACTL6B', 'AFAP1', 'AHR', 'AKT1', 'ANXA5', 'ARID1A', 'ARID1B', 'ARID4A', 'ARMCX1', 'ARMCX2', 'ARMCX3', 'ARNT', 'AR', 'ASF1A', 'ATF2', 'ATM', 'AURKB', 'BCR', 'BDP1', 'BGLAP', 'BRCA1', 'BRF1', 'FAM208A', 'C4BPA', 'CABIN1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CBFB', 'CBX1', 'CBX4', 'CBX5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNT2', 'CDC25A', 'CDC27', 'CDC6', 'CDH1', 'CDK14', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPA', 'CEBPB', 'CEBPD', 'CEBPE', 'CHEK1', 'CHEK2', 'CLNK', 'COL1A1', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUX1', 'DCAF10', 'DGKZ', 'DNAJA3', 'DNMT1', 'DNMT3A', 'DUSP1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EGFR', 'EGF', 'EID1', 'EIF2AK1', 'EIF2AK4', 'AGO2', 'ELF1', 'ENC1', 'EP300', 'ERBB2', 'ESD', 'ESR1', 'ESR2', 'EZH2', 'FBXW7', 'FMO5', 'FOS', 'FOXM1', 'FRK', 'FZR1', 'G6PD', 'GAPDH', 'GATA1', 'GJA1', 'GNB2L1', 'GRB2', 'GSC', 'GTF2H1', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HARS2', 'HARS', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC8', 'HDC', 'HES1', 'HIF1A', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HIST4H4', 'HMGA1', 'HMGA2', 'HRAS', 'HSP90AA1', 'HSPA1A', 'HSPA8', 'ID2', 'IFI16', 'INS', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'KDM2A', 'KDM4A', 'KDM5A', 'KDM5B', 'PPP1R26', 'KIF11', 'KRAS', 'KRT10', 'KRT14', 'KRT5', 'L3MBTL2', 'L3MBTL1', 'LIMD1', 'LIN52', 'LIN54', 'LIN9', 'LMNA', 'LOR', 'LPAR6', 'MAF', 'MAP2K7', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEF2C', 'MORF4L1', 'MRFAP1', 'MRPL11', 'MRPS18B', 'MSH6', 'MTL5', 'MYBL2', 'MYC', 'MYOD1', 'NACC2', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NCR1', 'NDC80', 'NEO1', 'NFYA', 'NFYB', 'NFYC', 'NGF', 'NOTCH1', 'NPM1', 'NRAS', 'ORC1', 'PA2G4', 'PAX2', 'PAX3', 'PAX5', 'PAX6', 'PAX8', 'PCNA', 'PELP1', 'PGR', 'PHB', 'PHF21B', 'PIAS4', 'PIK3CA', 'PIK3R1', 'PIK3R3', 'PLK1', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPIA', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP1R3A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R3B', 'PPRC1', 'PRB1', 'PRB3', 'PRB4', 'PRDM2', 'PRH1', 'PRH2', 'PRIM1', 'PRIM2', 'PRKCB', 'PRMT2', 'PSMA7', 'PSMC1', 'PSMD10', 'PTEN', 'PTGDR', 'RAF1', 'RB1CC1', 'RBAK', 'RBBP4', 'RBBP5', 'RBBP6', 'RBBP7', 'RBBP8', 'RBBP9', 'RBL1', 'RBL2', 'RBFOX2', 'RFC1', 'RPS6KB1', 'RUNX2', 'S100A6', 'SETD1B', 'SETD7', 'SIRT1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMC1A', 'SMC2', 'SMC4', 'SMC5', 'SMYD2', 'SNW1', 'SP100', 'SP1', 'SP3', 'SPI1', 'STAM', 'STAT3', 'SUV39H1', 'SUV420H2', 'SUZ12', 'TAF1', 'TBP', 'TERT', 'TFAP2A', 'TFDP1', 'TFDP3', 'TGM2', 'THAP1', 'TMPO', 'TNS1', 'TOP2A', 'TP53BP1', 'TP53', 'TP73', 'TRDMT1', 'TRIM27', 'TTK', 'UBE2I', 'UBE3A', 'UBL4A', 'UBN1', 'UBR4', 'UBTF', 'UHRF1', 'USP4', 'USP7', 'VEGFA', 'VPS39', 'WDR59', 'WDR73', 'WEE1', 'WWTR1', 'YAP1', 'YY1', 'ZBTB16', 'ZBTB7A', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.8268703350763363 Spearman Correlation: 0.7578241515973115 Coefficient of Determination: 0.6837145510292525 RMSE: 0.14144783714612358 NRMSE: 0.05172902177666895 MAPE: 333.98954808763506 Pearson Correlation: -0.06973641674376135 Spearman Correlation: -0.039344630232297166 Coefficient of Determination: -12.600726353170778 RMSE: 0.6080722966938796 NRMSE: 0.5826009817708577 MAPE: 953.2028453788062 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: RandomForests Pearson Correlation: 0.5793800457140716 Spearman Correlation: 0.4352192694372206 Coefficient of Determination: 0.1884714823993323 RMSE: 0.2265732310234822 NRMSE: 0.08286030976575563 MAPE: 177.20290416760355 Pearson Correlation: 0.0526387952800828 Spearman Correlation: 0.13829848252471977 Coefficient of Determination: -0.12007331950836031 RMSE: 0.17450078803985147 NRMSE: 0.16719118924601567 MAPE: 121.55710028496003 Protein: CDH1 Protein Interaction Partners Count: 834 x_train_column_count: 826 x_train columns: ['ABCB1', 'ABCG2', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTR3', 'ACVR1B', 'ADAM10', 'ADAM15', 'ADAM17', 'ADAM9', 'AFP', 'AIMP1', 'AJAP1', 'AKAP9', 'AKT1', 'AKT2', 'AKTIP', 'ALB', 'ALCAM', 'ALDH1A1', 'ALDH3A1', 'ALK', 'AMOTL2', 'ANAPC4', 'ANAPC7', 'ANO1', 'ANXA2', 'ANXA5', 'AP1M1', 'AP1M2', 'APC2', 'APC', 'AQP1', 'AQP5', 'AREG', 'ARF6', 'ARHGAP31', 'ARID1A', 'ARL2BP', 'ARMC7', 'ARPC1A', 'ARPC2', 'ARRB2', 'ARVCF', 'AR', 'CLMP', 'ASF1A', 'ATF2', 'ATF3', 'ATM', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BAG3', 'BANP', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL6B', 'BCL9L', 'BCORL1', 'BMI1', 'BMP2', 'BMP4', 'BMP6', 'BMP7', 'BNIP3', 'BRCA1', 'BRCA2', 'BSG', 'BTBD7', 'BTC', 'BTF3', 'ANAPC15', 'CA2', 'CA9', 'CALCA', 'CALR', 'CAPN1', 'CAPNS1', 'CASP3', 'CASP8', 'CASP9', 'CASS4', 'CAV1', 'CBLL1', 'CBL', 'CBX7', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CCR7', 'CD1A', 'CD1B', 'CD1C', 'CD1E', 'CD207', 'CD24', 'CD274', 'CD276', 'CD2AP', 'CD34', 'CD44', 'CD46', 'CD68', 'CD82', 'CDC16', 'CDC23', 'CDC27', 'CDC42', 'CDC6', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH24', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK14', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN3', 'CDX2', 'CEACAM5', 'CFL1', 'CGN', 'CHGA', 'CHL1', 'CLCA2', 'CLDN1', 'CLDN2', 'CLDN3', 'CLDN4', 'CLDN5', 'CLDN7', 'CNTN1', 'COL1A1', 'CORO1C', 'CRB3', 'CREB1', 'CREBBP', 'CRYAB', 'YBX3', 'CSDC2', 'CSE1L', 'CSF2', 'CSNK2A1', 'CSNK2A2', 'CST5', 'CTBP1', 'CTBP2', 'CTCF', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTSL', 'CTTN', 'CXCL12', 'CXCL1', 'CXCR4', 'CYP1B1', 'DAAM1', 'DAB2IP', 'DACH1', 'DAPK1', 'DAP', 'DDR1', 'DDR2', 'DDX3X', 'DICER1', 'DKK1', 'DLC1', 'DLG1', 'DLG5', 'DNM2', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOT1L', 'DPAGT1', 'DPEP1', 'DSP', 'DUOX1', 'DUSP4', 'DVL1', 'DVL2', 'E2F1', 'ECT2', 'EDN1', 'EFEMP1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'EHD1', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'ELAVL1', 'ELF3', 'ENAH', 'ENG', 'EP300', 'EPB41L3', 'EPCAM', 'EPHA10', 'EPHA1', 'EPHA2', 'EPPK1', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ESRP1', 'ESRP2', 'ETS1', 'ETS2', 'EXOC3', 'EXOC4', 'EYA2', 'EZH2', 'EZR', 'F11R', 'F2RL2', 'SUPT20H', 'FBXL5', 'FER', 'FGF10', 'FGF13', 'FGF17', 'FGF19', 'FGF2', 'FGF4', 'FGF5', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FMN1', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC1', 'FOXC2', 'FOXJ2', 'FOXK2', 'FOXL1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXQ1', 'FRMPD2', 'FSCN1', 'FUT4', 'FXYD5', 'FYN', 'FZD1', 'FZD4', 'FZD7', 'FZR1', 'G6PD', 'GAB2', 'GABPA', 'GADD45A', 'GAPDH', 'GAS6', 'GATA1', 'GATA3', 'GATA4', 'GATA6', 'GDNF', 'GFRA1', 'GGT1', 'GJA1', 'GJB1', 'GJB2', 'GKN2', 'GLI1', 'GLI2', 'GMNN', 'GNA12', 'GNA13', 'GNB2L1', 'GNL3', 'GPA33', 'GRB2', 'GRHL2', 'GRHL3', 'GSK3B', 'GSN', 'GSTP1', 'H2AFZ', 'HAVCR2', 'HBEGF', 'HDAC1', 'HDAC2', 'HEPACAM', 'HES1', 'HGF', 'HGS', 'HIF1A', 'HMGA2', 'HNF4A', 'HOXB4', 'HOXD10', 'HPGDS', 'HPGD', 'HRAS', 'HSP90AA1', 'HSPA5', 'ICAM1', 'ID1', 'ID2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP3', 'IL10', 'IL15', 'IL17A', 'IL1B', 'IL24', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IQSEC1', 'IRS1', 'IRS2', 'ITGA5', 'ITGA6', 'ITGAE', 'ITGAM', 'ITGB1', 'ITGB4', 'ITGB7', 'ITPKB', 'IVL', 'JAG1', 'JAK2', 'AJUBA', 'JUN', 'JUP', 'KDM1A', 'KDM6A', 'KDR', 'KEAP1', 'KIFC3', 'KIT', 'KLF4', 'KLF5', 'KLF8', 'KLK3', 'KLK7', 'KLRG1', 'KRAS', 'KRT10', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'KRT9', 'LAMA1', 'LAMB1', 'LAMC2', 'LASP1', 'LATS1', 'LATS2', 'LCN2', 'LEF1', 'LEP', 'LGALS3', 'LGALS4', 'LGALS9', 'LGR5', 'LIF', 'LIMA1', 'LIN28A', 'LIPG', 'LLGL2', 'LMNA', 'LOR', 'LOXL2', 'LOXL3', 'LOX', 'LRP5', 'LRP6', 'LY6K', 'MACC1', 'MACROD1', 'MAD2L2', 'MAGI1', 'MAP2K1', 'MAP2K7', 'MAP4K5', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARK2', 'MARVELD2', 'MCAM', 'MCL1', 'MDM2', 'MED1', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGAT5', 'MGMT', 'MKI67', 'MLH1', 'MLLT4', 'MME', 'MMP11', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP1', 'MMP25', 'MMP27', 'MMP2', 'MMP3', 'MMP7', 'MMP8', 'MMP9', 'MPP5', 'MRAP', 'MSH2', 'MSN', 'MT1G', 'MTA1', 'MTA3', 'MTBP', 'MTDH', 'MTOR', 'MUC1', 'MUC4', 'MYCN', 'MYC', 'MYH6', 'MYO6', 'MYO7A', 'NANOG', 'NCAM1', 'NCOA1', 'NCSTN', 'NDRG1', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEUROG3', 'NF2', 'NFE2L2', 'NFIC', 'NKD2', 'NKX2-1', 'NKX6-1', 'NKX6-2', 'NME1', 'NOG', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NR2F1', 'NRP2', 'NUDT21', 'NUMBL', 'NUMB', 'NUP98', 'NUTF2', 'OTUB1', 'OVOL1', 'OVOL2', 'PARD3', 'PARD6A', 'PAX2', 'PAX5', 'PAX6', 'PAX8', 'PCSK9', 'PDCD4', 'PDGFRB', 'PDPN', 'PEBP1', 'PECAM1', 'PGR', 'PHLPP1', 'PI3', 'PIK3CA', 'PIK3R1', 'PIP5K1A', 'PIP5K1C', 'PIP', 'PIR', 'PITX1', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAUR', 'PLAU', 'PLCD1', 'PLEKHA7', 'PLG', 'PODXL', 'POLR2C', 'POSTN', 'POTEF', 'POU5F1', 'PPARA', 'PPARGC1A', 'PPARG', 'PPL', 'PPP6C', 'PRAME', 'PRDM10', 'PRKAR1A', 'PRKCA', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRKG1', 'PRMT5', 'PROC', 'PROM1', 'PRSS8', 'PSEN1', 'PTCH1', 'PTEN', 'PTF1A', 'PTGS2', 'PTK2', 'PTPN11', 'PTPN14', 'PTPRC', 'PTPRF', 'PTPRJ', 'PTPRM', 'PTPRS', 'PTPRT', 'PTPRU', 'PTRH2', 'PVRL1', 'PVRL2', 'PVR', 'PXN', 'RAB11A', 'RAB25', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RACGAP1', 'RAF1', 'RALA', 'RALBP1', 'RALGDS', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RARB', 'RASSF1', 'RB1', 'RBM4', 'RCOR1', 'RDX', 'REM1', 'RET', 'RHOA', 'RHOB', 'RHOC', 'RHOD', 'RICTOR', 'RND3', 'ROCK1', 'ROCK2', 'RPS6KB1', 'RPTOR', 'RRM2', 'RUNX2', 'RUNX3', 'S100A14', 'S100A4', 'S100A8', 'SATB1', 'SCRIB', 'SDC1', 'SDC4', 'SDHC', 'SELE', 'SELL', 'SELP', 'SEMA3C', 'SEMA3F', 'SENP1', 'SERPINB4', 'SERPINB5', 'SERPINE1', 'SFN', 'SFRP1', 'SFRP2', 'SFTPC', 'SHH', 'SIK1', 'SIN3A', 'SIRT1', 'SIRT2', 'SIRT4', 'SIRT7', 'SIX1', 'SIX2', 'SKIL', 'SKP2', 'SLC2A1', 'SLC39A6', 'SLC6A3', 'SLC9A3R1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SNAI1', 'SNAI2', 'SNAI3', 'SNX16', 'SNX1', 'SOX10', 'SOX17', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPARC', 'SPDEF', 'SPINT1', 'SPP1', 'SPRY1', 'SRCIN1', 'SRC', 'SRXN1', 'ST14', 'ST7L', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STX4', 'STYK1', 'SUCLG2', 'SUMO1', 'SUZ12', 'SYNJ2', 'SYP', 'TACC3', 'TACSTD2', 'TATDN1', 'TBX1', 'TBX3', 'TCF15', 'TCF4', 'TDGF1', 'TERT', 'TET2', 'TFF1', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBI', 'TGFBR1', 'TGFBR2', 'THBS1', 'THEM4', 'THUMPD1', 'THY1', 'TIAM1', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLN1', 'TLR4', 'TMPRSS2', 'TMPRSS4', 'TNFRSF6B', 'TNF', 'TNK2', 'TNS1', 'TP53BP1', 'TP53BP2', 'TP53', 'TRIM21', 'TRIM29', 'TRIM44', 'TRIP10', 'TRPS1', 'TSPYL2', 'TWIST1', 'TWIST2', 'TYRP1', 'T', 'UBE2I', 'UBE2S', 'USP48', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VEZT', 'VHL', 'VIM', 'VIPAS39', 'VPS33B', 'VTN', 'WASL', 'WDFY2', 'WDTC1', 'WIF1', 'WISP1', 'WISP3', 'WNT10A', 'WNT10B', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT9A', 'WNT9B', 'WT1', 'XIAP', 'YAP1', 'YBX1', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 6.415803044039107e-15 NRMSE: 1.021592153759292e-15 MAPE: 4.789774795158486e-12 Pearson Correlation: 0.2313246283062348 Spearman Correlation: 0.20901258120425445 Coefficient of Determination: -1.621878901892904 RMSE: 1.8887364885783442 NRMSE: 0.3426465818690077 MAPE: 872.9919011562534 Predictor: ElasticNet Pearson Correlation: 0.6638780643323363 Spearman Correlation: 0.6620471415120391 Coefficient of Determination: 0.35532865700265304 RMSE: 0.8984701566357128 NRMSE: 0.1430639401031357 MAPE: 392.5961836912991 Pearson Correlation: 0.6772807142645669 Spearman Correlation: 0.5225925510293146 Coefficient of Determination: 0.28721562569153725 RMSE: 0.9847911597898744 NRMSE: 0.17865664522148586 MAPE: 258.4103559652835 Predictor: RandomForests Pearson Correlation: 0.753766769231701 Spearman Correlation: 0.7342746966759073 Coefficient of Determination: 0.5625251504145368 RMSE: 0.7401351311327643 NRMSE: 0.11785215934727623 MAPE: 216.7168265193337 Pearson Correlation: 0.7698116589512704 Spearman Correlation: 0.5021041435734319 Coefficient of Determination: 0.5286020434695378 RMSE: 0.8008642433908563 NRMSE: 0.14528940230594975 MAPE: 166.4565667458046 Protein: CDH2 Protein Interaction Partners Count: 472 x_train_column_count: 467 x_train columns: ['ABCG2', 'ABL1', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTR3', 'ADAM10', 'ADH1A', 'AFP', 'AHSG', 'AKT1', 'AKT3', 'ALB', 'ALCAM', 'ALDH1A1', 'AMBN', 'AMELX', 'AMOTL1', 'AMTN', 'ANGPT1', 'ANO8', 'ANXA5', 'APC2', 'APC', 'APLP2', 'APOA1', 'APOA2', 'APOA5', 'APOB', 'APOE', 'APOL1', 'APPL1', 'APP', 'ARHGAP32', 'ARMC7', 'ARPC5', 'ARVCF', 'AR', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BCL2L1', 'BDNF', 'BMI1', 'BMP15', 'BMP2', 'BMP4', 'BMP7', 'BNIP2', 'BOC', 'BPIFB2', 'RGCC', 'GSKIP', 'C3', 'C4A', 'CABLES1', 'CADM1', 'CALU', 'CASP3', 'CAV1', 'CBLL1', 'CCNA2', 'CCNB1', 'CCND1', 'CD24', 'CD34', 'CD44', 'CD80', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK4', 'CDK5', 'CDK6', 'CDKN2A', 'CDON', 'CDX2', 'CEBPZ', 'CFL1', 'CHGB', 'CHL1', 'CHRDL1', 'CKAP4', 'CLDN11', 'CLDN3', 'CLDN4', 'CLDN7', 'CORT', 'CP', 'CREBBP', 'CRP', 'CSF1', 'CSK', 'CST3', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTTN', 'CXCL12', 'CXCR4', 'CYLD', 'CYR61', 'DBN1', 'DDR1', 'DDR2', 'DKK1', 'DLG4', 'DLG5', 'DMP1', 'DNAJC3', 'DSP', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EFNB2', 'EFNB3', 'EGFR', 'EGF', 'EHMT2', 'EIF2AK3', 'ENAM', 'ENG', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA4', 'EPHB2', 'EPS8', 'ERBB2', 'ERBB4', 'ESR1', 'ESRP1', 'EXOC4', 'EZH2', 'EZR', 'F11R', 'F5', 'EVA1A', 'FAM20A', 'FAM20C', 'FBN1', 'FER', 'FGA', 'FGF13', 'FGF23', 'FGF2', 'FGFR1', 'FGFR4', 'FGG', 'FN1', 'FOXC2', 'FOXD3', 'FOXO1', 'FOXP4', 'FSTL1', 'FSTL3', 'FUCA2', 'GAA', 'GAPDH', 'GAS6', 'GATA4', 'GFAP', 'GJA10', 'GJA1', 'GJA3', 'GJB6', 'GJC1', 'GJC3', 'GJD3', 'GJD4', 'GLI1', 'GOLM1', 'GPC3', 'GRIA1', 'GRIA2', 'HGF', 'HMGA2', 'HNF4A', 'HRAS', 'HRC', 'HSP90B1', 'HSPA5', 'IARS2', 'IGF1R', 'IGF1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL1B', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'INVS', 'IQGAP1', 'ISL1', 'ITGA6', 'ITGB1', 'ITIH2', 'ITPKB', 'JAG1', 'JAM3', 'JUN', 'JUP', 'KCNA5', 'KDR', 'KIAA2022', 'KIF5B', 'KIT', 'KLF4', 'KNG1', 'KRAS', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT8', 'KTN1', 'L1CAM', 'LAMB1', 'LAMB2', 'LAMC1', 'LEF1', 'LGALS1', 'LRP5', 'LRP6', 'LRRC7', 'LTBP1', 'LTBP3', 'MAP1B', 'MAP2K6', 'MAP2K7', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MATN3', 'MBTPS1', 'MCAM', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEPE', 'MET', 'MFGE8', 'MFI2', 'MGAT4A', 'MIA3', 'MKI67', 'MLLT4', 'MMP14', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MPDZ', 'MPP5', 'MRAP', 'MRPL49', 'MSLN', 'MSN', 'MTHFD1', 'MUC1', 'MUC4', 'MXRA8', 'MYC', 'MYO10', 'MZF1', 'NANOG', 'NCAM1', 'NCSTN', 'NDRG1', 'NENF', 'NES', 'NFASC', 'NGF', 'NKX2-5', 'NLGN1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTUM', 'NRCAM', 'NT5C', 'NT5E', 'NTRK2', 'NUCB1', 'NUMBL', 'NUMB', 'OLFM3', 'P4HB', 'PARD3', 'PAX6', 'PCSK9', 'PC', 'PDGFRB', 'PDIA4', 'PDIA6', 'PECAM1', 'PENK', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PITX2', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PNPLA2', 'POU5F1', 'PPT2', 'PRKCDBP', 'PRKCSH', 'PROC', 'PROM1', 'PRPH', 'PRSS23', 'PSEN1', 'PTEN', 'PTK2', 'PTPN11', 'PTPN1', 'PTPN2', 'PTPRC', 'PTPRS', 'PVRL1', 'PVRL2', 'PVRL3', 'PXN', 'QSOX1', 'RAB11FIP1', 'RAB3D', 'RAB5A', 'RAC1', 'RCN1', 'RELN', 'REM1', 'RHOA', 'RHOB', 'RHOC', 'ROBO1', 'PTBP3', 'RPS6KB1', 'RUNX2', 'S100A14', 'S100A4', 'SARS2', 'SCARB2', 'SCG2', 'SCG3', 'SDC2', 'SEMA3A', 'SENP3', 'SERPINA10', 'SERPINA1', 'SERPINC1', 'SERPIND1', 'SERPINE1', 'SHH', 'SHISA5', 'SIRT7', 'SKP1', 'SLC2A1', 'SLC9A3R1', 'SLIT1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SNAI1', 'SNAI2', 'SNAI3', 'SOX10', 'SOX18', 'SOX1', 'SOX2', 'SOX4', 'SOX9', 'SP7', 'SPAG9', 'SPARCL1', 'SPARC', 'SPP1', 'SPP2', 'SRC', 'ST6GALNAC5', 'STAT3', 'STC2', 'SYP', 'TBX1', 'TCF3', 'TEK', 'TF', 'TGFB1', 'TGFBR1', 'TGM2', 'TGOLN2', 'THY1', 'TIMP1', 'TJP1', 'TJP3', 'TMEM132A', 'TNC', 'TNF', 'TNNT1', 'TP53', 'TRPS1', 'TSC2', 'TWIST1', 'TWIST2', 'USP9X', 'VANGL2', 'VCAM1', 'VCAN', 'VCL', 'VEGFA', 'VGF', 'VIM', 'VTN', 'VWA1', 'WFS1', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7A', 'XIRP1', 'ZBTB16', 'ZEB1', 'ZEB2', 'ZSCAN1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.9408644504639467 Spearman Correlation: 0.9237686573195413 Coefficient of Determination: 0.8852259141468249 RMSE: 0.1285220087925566 NRMSE: 0.04656931980308595 MAPE: 2932.3242761674956 Pearson Correlation: 0.061827886839767546 Spearman Correlation: 0.05557425903066123 Coefficient of Determination: -64.84877951610562 RMSE: 2.704370679758673 NRMSE: 1.3950985719525981 MAPE: 1927.0099157750128 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: RandomForests Pearson Correlation: 0.550213109049189 Spearman Correlation: 0.4891234906858902 Coefficient of Determination: 0.1892807304488393 RMSE: 0.34157873950022544 NRMSE: 0.12376938165817286 MAPE: 1003.40915529767 Pearson Correlation: 0.17163326065502296 Spearman Correlation: 0.1920048878414943 Coefficient of Determination: -0.004505765583519228 RMSE: 0.33401699974633664 NRMSE: 0.1723087159766088 MAPE: 181.21785458783677 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.5168390583924104 Spearman Correlation: 0.5403178575375212 Coefficient of Determination: 0.2671226122799537 RMSE: 0.1762760293337962 NRMSE: 0.12562968009877576 MAPE: 434.5503985700555 Pearson Correlation: 0.4063723413974719 Spearman Correlation: 0.40395266773899924 Coefficient of Determination: -0.3251363019352269 RMSE: 0.2392036845219124 NRMSE: 0.21290179657325273 MAPE: 926.9153647230152 Predictor: ElasticNet Pearson Correlation: 0.2934400197619197 Spearman Correlation: 0.34742358107542676 Coefficient of Determination: 0.001241745743384426 RMSE: 0.20578219201564923 NRMSE: 0.1466583462916382 MAPE: 175.4825468457067 Pearson Correlation: 0.3454805850435642 Spearman Correlation: 0.347897105948952 Coefficient of Determination: -0.09899485657343421 RMSE: 0.21783889185129154 NRMSE: 0.19388619172552068 MAPE: 210.66662908756922 Predictor: RandomForests Pearson Correlation: 0.5492470972367409 Spearman Correlation: 0.5433468367086957 Coefficient of Determination: 0.2574319733918553 RMSE: 0.17743762712931946 NRMSE: 0.12645753604723653 MAPE: 435.61382629898475 Pearson Correlation: 0.450451981096876 Spearman Correlation: 0.3980673075724137 Coefficient of Determination: 0.12512572123777044 RMSE: 0.194361576653241 NRMSE: 0.1729903489446223 MAPE: 635.6356775073434 Protein: PTEN Protein Interaction Partners Count: 884 x_train_column_count: 876 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ABTB1', 'ACTB', 'ACTG1', 'ADM', 'AEBP1', 'AFP', 'AKT1S1', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'AMHR2', 'ANXA2', 'ANXA5', 'APAF1', 'APC', 'ARAF', 'AREG', 'ARHGAP21', 'ARID1A', 'ARID2', 'ARL2BP', 'AR', 'ATF3', 'ATG12', 'ATG5', 'ATG7', 'ATM', 'ATRX', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'AXL', 'BAD', 'BAG5', 'BARD1', 'BAX', 'BBC3', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BIRC3', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BNIP3', 'BRAF', 'BRCA1', 'BRCA2', 'BRD4', 'BTG2', 'BTK', 'SPRTN', 'CLHC1', 'CA9', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBL', 'CBX7', 'CCL2', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD24', 'CD274', 'CD34', 'CD44', 'CD79A', 'CD79B', 'CDC14A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC7', 'CDH17', 'CDH1', 'CDH2', 'CDIPT', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CENPC', 'CFL1', 'CFLAR', 'CFTR', 'CHD1', 'CHD8', 'CHEK1', 'CHEK2', 'CHKA', 'CHORDC1', 'CHUK', 'CLTCL1', 'CLTC', 'CNOT6L', 'CREB1', 'CREBBP', 'CRP', 'CSF1R', 'CSF1', 'CSK', 'CSN2', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTGF', 'CTLA4', 'CTNNB1', 'CUL1', 'CUL3', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'DAPK1', 'DAXX', 'DBN1', 'DCAF13', 'DDIT4', 'DDR2', 'DECR1', 'DEPTOR', 'DGCR8', 'DICER1', 'DLC1', 'DLG1', 'DLG4', 'DNM1L', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOLPP1', 'DUSP1', 'DUSP6', 'DUT', 'DVL1', 'DYRK1A', 'E2F1', 'E2F2', 'E2F3', 'ECSCR', 'EGFR', 'EGF', 'EGR1', 'EIF2AK2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4EBP2', 'EIF4E', 'EIF4G1', 'EML4', 'ENDOG', 'EP300', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA3', 'EPHA4', 'EPHA5', 'EPHA7', 'EPHB1', 'EPHB2', 'EPHB3', 'EPHB4', 'ERBB2', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ESR1', 'ETS1', 'ETS2', 'ETV1', 'ETV6', 'EYA2', 'EZH2', 'EZR', 'FABP4', 'FASLG', 'FASN', 'FBXW7', 'FCGR1B', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FIG4', 'FKBP1A', 'FLCN', 'FLT1', 'FLT3', 'FLT4', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXG1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FOXP3', 'FRK', 'FYN', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GCK', 'GDF10', 'GDF2', 'GFAP', 'GJA1', 'GLI1', 'GNA11', 'GNAQ', 'GNAS', 'GNRHR', 'GRASP', 'GRB2', 'GRPR', 'GSK3A', 'GSK3B', 'GSTP1', 'H1F0', 'H2AFX', 'HAVCR2', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HES1', 'HGF', 'HIF1A', 'HIST1H2BA', 'HK1', 'HK2', 'HMGA2', 'HNF4A', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA1A', 'HSPA1B', 'HSPA2', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'ID1', 'ID4', 'IDH1', 'IDH2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL17A', 'IL21', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INPP4A', 'INPP4B', 'INPP5A', 'INPP5B', 'INPP5D', 'INPP5E', 'INPP5F', 'INPP5J', 'INPP5K', 'INPPL1', 'INSRR', 'INSR', 'INS', 'IPMK', 'IPO11', 'IQGAP1', 'IRAK1', 'IRS1', 'IRS2', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'ITPR3', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUN', 'KAT2B', 'KDM5B', 'KDM5C', 'KDM6A', 'KDR', 'KEAP1', 'ATG13', 'KIF11', 'KLLN', 'KITLG', 'KIT', 'KLF17', 'KLF2', 'KLF4', 'KLK3', 'KPNA1', 'KPNA2', 'KPNA5', 'KPNA6', 'KPNA7', 'KRAS', 'KRT14', 'KRT5', 'KRT8', 'LASP1', 'LATS1', 'LATS2', 'LCK', 'LDHA', 'LEF1', 'LEP', 'LGALS3', 'LIG4', 'LOX', 'LRIG1', 'LRP1B', 'LRRK2', 'LYN', 'LYPD1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAN2C1', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K3', 'MAP2K4', 'MAP2K7', 'MAP3K1', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK4', 'MAPK6', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAP1', 'MAPT', 'MARCH2', 'MARCH3', 'MAST1', 'MAST2', 'MAST3', 'MAST4', 'MATK', 'MCL1', 'MCM2', 'MCM7', 'MCRS1', 'MDK', 'MDM2', 'MDM4', 'MECOM', 'MECP2', 'MED12', 'MEN1', 'MET', 'MGMT', 'MINPP1', 'MITF', 'MKI67', 'MKRN1', 'MLH1', 'MLH3', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT1', 'MLST8', 'MME', 'MMP2', 'MMP9', 'MOV10', 'MRAP', 'MRE11A', 'MSH2', 'MSH6', 'MTDH', 'MTMR2', 'MTOR', 'MTSS1', 'MUTYH', 'MVP', 'MYCN', 'MYC', 'MYLK', 'MYOCD', 'NANOG', 'NCKAP1', 'NCOA3', 'NCOR2', 'NDFIP1', 'NDFIP2', 'NDRG1', 'NDRG2', 'NEDD4L', 'NEDD4', 'NES', 'NF1', 'NF2', 'NFATC1', 'NFATC4', 'NFE2L2', 'NFKBIA', 'NGFR', 'NKX3-1', 'NLGN3', 'NLGN4X', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR1H4', 'NR3C2', 'NRAS', 'NRP2', 'NTRK1', 'NTRK2', 'NUMB', 'OCRL', 'OLIG2', 'OTUD3', 'PALB2', 'PARD3', 'PARD6A', 'PARD6B', 'PARD6G', 'PARK2', 'PARK7', 'PARP1', 'PAX8', 'PBK', 'PBRM1', 'PCGF2', 'PCSK9', 'PDCD1', 'PDCD4', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PDK1', 'PDK2', 'PDPK1', 'PDZK1', 'PECAM1', 'PGM3', 'PGR', 'PHF6', 'PHLPP1', 'PHLPP2', 'PI3', 'PI4K2A', 'PI4K2B', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIK3R5', 'PIKFYVE', 'PINK1', 'PIP4K2A', 'PIP4K2B', 'PIP4K2C', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PIP5KL1', 'PKM', 'PLCB1', 'PLCB2', 'PLCB3', 'PLCB4', 'PLCD1', 'PLCD3', 'PLCD4', 'PLCE1', 'PLCG1', 'PLCG2', 'PLCH1', 'PLCH2', 'PLCZ1', 'PLEKHA1', 'PLEK', 'PLK1', 'PLK2', 'PLK3', 'BPIFA1', 'PMAIP1', 'PML', 'PMPCA', 'PMS1', 'PMS2', 'POLE', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPM1D', 'PPP2R1A', 'PPP2R4', 'PPP2R5A', 'PPP2R5E', 'PPP3CA', 'PPP6C', 'PRDX1', 'PREX2', 'PRKAA1', 'PRKAA2', 'PRKCI', 'PRKCZ', 'PRKDC', 'PRMT5', 'PROM1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTER', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPMT1', 'PTPN11', 'PTPN12', 'PTPN13', 'PTPN1', 'PTPRC', 'PTPRD', 'PTS', 'PXN', 'RAB7A', 'RAC1', 'RAC2', 'RAD51C', 'RAD51D', 'RAD51', 'RAD52', 'RAF1', 'RASA1', 'RASSF1', 'RB1CC1', 'RB1', 'RBL1', 'RBL2', 'RBM38', 'RBFOX2', 'RCN1', 'RECK', 'RELA', 'REL', 'REM1', 'RETN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'DROSHA', 'RNF146', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KB1', 'RPS6KB2', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'RRM1', 'RSL1D1', 'RUNX3', 'RWDD3', 'SACM1L', 'SALL4', 'SCAI', 'SCGB1D4', 'SCRIB', 'SDHB', 'SDHC', 'SERPINA1', 'SERPINA4', 'SERPINB5', 'SESN1', 'SESN2', 'SETD2', 'SGK1', 'SGK2', 'SGK3', 'SHANK2', 'SHARPIN', 'SHC1', 'SHFM1', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT5', 'SIRT6', 'SIRT7', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC2A4', 'SLC34A2', 'SLC9A3R1', 'SLC9A3R2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNCA', 'SNX27', 'SOCS1', 'SOCS3', 'SOD2', 'SOS1', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPOP', 'SPRY1', 'SPRY2', 'SRBD1', 'SRC', 'SREBF1', 'SRF', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STMN1', 'STUB1', 'STX16', 'SUCLG2', 'SUMO1', 'SYK', 'SYNJ1', 'SYNJ2', 'TACSTD2', 'TBX1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TEP1', 'TERT', 'TET1', 'TGFB1', 'TGFBR1', 'TGFBR2', 'TGM2', 'THBS1', 'TIMP1', 'TIMP3', 'TJP1', 'TLR4', 'TMEM55A', 'TMEM55B', 'TMPRSS2', 'TNFRSF10B', 'TNFSF10', 'TNF', 'TNKS2', 'TNKS', 'TNPO2', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TPM1', 'TRAF6', 'TRIM27', 'TRIM29', 'TSC1', 'TSC2', 'TTN', 'TUT1', 'TWIST1', 'TWSG1', 'TXN', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2E1', 'UBE2I', 'UBE2L3', 'UBE3A', 'ULK1', 'ULK2', 'USP10', 'USP13', 'USP18', 'USP28', 'USP7', 'USP8', 'UTF1', 'UVRAG', 'VCL', 'VDR', 'VEGFA', 'VHL', 'WDR18', 'WDTC1', 'WEE1', 'WIPI1', 'WIPI2', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT9A', 'WNT9B', 'WT1', 'WWP1', 'WWP2', 'XIAP', 'XPO1', 'XPO5', 'YAP1', 'YES1', 'YWHAB', 'YWHAZ', 'YY1', 'ZEB1', 'ZEB2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.0217037306276026e-15 NRMSE: 5.845140302204431e-16 MAPE: 7.346373326027425e-12 Pearson Correlation: 0.028252889019364808 Spearman Correlation: -0.024057656579259092 Coefficient of Determination: -1.4676778075176404 RMSE: 1.1712064394832409 NRMSE: 0.1831297692882872 MAPE: 2536.893471707011 Predictor: ElasticNet Pearson Correlation: 0.41669880078867544 Spearman Correlation: 0.41339044392237173 Coefficient of Determination: 0.06579776727724407 RMSE: 0.5429848626704361 NRMSE: 0.10503421206097882 MAPE: 264.6232974203807 Pearson Correlation: 0.270665992900973 Spearman Correlation: 0.2917118667315054 Coefficient of Determination: 0.02612283734294185 RMSE: 0.7357687101275242 NRMSE: 0.115044751798534 MAPE: 561.4788525459916 Predictor: RandomForests Pearson Correlation: 0.608299597331999 Spearman Correlation: 0.56824097230616 Coefficient of Determination: 0.2836381712611429 RMSE: 0.4754813534787179 NRMSE: 0.0919764301839055 MAPE: 168.30918216911732 Pearson Correlation: 0.43538911669612135 Spearman Correlation: 0.4725719772066984 Coefficient of Determination: 0.14202527403410892 RMSE: 0.6905998365003235 NRMSE: 0.10798214940197381 MAPE: 148.10205154417665 Protein: BRCA2 Protein Interaction Partners Count: 361 x_train_column_count: 351 x_train columns: ['ABL1', 'ACHE', 'ADRB1', 'ADRB2', 'AKT1', 'ALK', 'APEX1', 'ARID1A', 'ARPC1A', 'AR', 'ATAD5', 'ATM', 'ATRIP', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'B3GALTL', 'BACH1', 'BARD1', 'BCCIP', 'BCHE', 'BDNF', 'BECN1', 'BIRC5', 'BLM', 'BMI1', 'BRCA1', 'BRCC3', 'BRE', 'BRIP1', 'SLX4', 'BUB1B', 'BUB1', 'BUB3', 'SFR1', 'RHNO1', 'RMI2', 'BABAM1', 'MMS22L', 'CASC1', 'CASC5', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCNE1', 'CDC25A', 'CDC25C', 'CDC45', 'CDC6', 'CDH1', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CENPE', 'CENPF', 'CEP55', 'CHEK1', 'CHEK2', 'CHRNA1', 'CLSPN', 'CNTROB', 'CREM', 'CSMD3', 'CTNNB1', 'CYP19A1', 'DMC1', 'DNA2', 'DSN1', 'DYNC1LI2', 'EGFR', 'EGF', 'ELAC2', 'EME1', 'EME2', 'ENAM', 'EPCAM', 'ERBB2', 'ERBB3', 'ERCC1', 'ERCC2', 'ERCC4', 'ERCC5', 'ERCC6', 'ERCC8', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM175A', 'FANCA', 'FANCB', 'FANCC', 'FANCD2', 'FANCE', 'FANCF', 'FANCG', 'FANCI', 'FANCL', 'FANCM', 'FBN1', 'FBXO18', 'FBXW7', 'FEN1', 'FGFR2', 'FHIT', 'FLNA', 'FOXM1', 'GAPDH', 'GEN1', 'SLX1B', 'H2AFX', 'HELQ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HMG20A', 'HMG20B', 'HMMR', 'HNRNPC', 'HOXB13', 'HRAS', 'HUS1', 'ITPKB', 'KAT2B', 'KAT5', 'KEAP1', 'SPIDR', 'KIF23', 'KIF4A', 'KIT', 'KLK3', 'KRAS', 'KRT5', 'LIG1', 'LIG3', 'LIG4', 'LIMD1', 'LSP1', 'MAD2L2', 'MAGED1', 'MAMSTR', 'MAP2K2', 'MAP3K1', 'MCM10', 'MCPH1', 'MDC1', 'MDM2', 'MDM4', 'MEN1', 'MGMT', 'MKI67', 'MLH1', 'MLH3', 'KMT2C', 'MND1', 'MORF4L1', 'MRE11A', 'MRPL36', 'MSH2', 'MSH3', 'MSH4', 'MSH5', 'MSH6', 'MTA2', 'FAN1', 'MUC1', 'MUS81', 'MUTYH', 'MYC', 'NBN', 'NCAPG', 'NEDD4', 'NF1', 'NHEJ1', 'NNT', 'NOTCH1', 'NSL1', 'NSMCE4A', 'OBFC1', 'OGG1', 'PALB2', 'PARG', 'PARP1', 'PARP2', 'PARP3', 'PAXIP1', 'PCNA', 'PDLIM7', 'PDS5A', 'PDS5B', 'PGR', 'PIK3CA', 'PLCB4', 'PLEC', 'PLEKHH1', 'PLK1', 'PMS1', 'PMS2', 'PNOC', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'POLN', 'POLQ', 'PRDM9', 'PRKDC', 'PRSS1', 'PSMC3IP', 'PSMD3', 'PSMD6', 'PTEN', 'RAD17', 'RAD18', 'RAD1', 'RAD21', 'RAD23B', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD52', 'RAD54B', 'RAD54L', 'RAD9A', 'RAD9B', 'RAG2', 'RASSF1', 'RBBP8', 'RBMX', 'RECQL4', 'RECQL5', 'RECQL', 'RET', 'REV1', 'REV3L', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RNF168', 'RNF8', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SKP2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCAL1', 'SMARCB1', 'SMC1A', 'SMC2', 'SMC3', 'SMC4', 'SMC5', 'SMC6', 'SMUG1', 'SNAI2', 'SP1', 'SPO11', 'STAT5A', 'STK11', 'STRA13', 'SUV39H1', 'SYCP3', 'TBCE', 'TDP1', 'TERT', 'TEX15', 'TMPRSS2', 'TNS1', 'TOP1', 'TOP2A', 'TOP3A', 'TOP3B', 'TOPBP1', 'TOX3', 'TP53BP1', 'TP53', 'TPX2', 'TRIP12', 'PRSS58', 'TTK', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2D1', 'UBE2E2', 'UBE2E3', 'UBE2N', 'UBE2T', 'UIMC1', 'USF1', 'USP11', 'USP15', 'USP1', 'USP21', 'USP4', 'UVRAG', 'VEGFA', 'VWF', 'WDR48', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WTIP', 'XPA', 'XPO1', 'XRCC1', 'XRCC2', 'XRCC3', 'XRCC4', 'XRCC5', 'XRCC6', 'ZFYVE26', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.8392616558044157 Spearman Correlation: 0.803151973960087 Coefficient of Determination: 0.7043601269035694 RMSE: 0.10428549787886418 NRMSE: 0.0671834420221383 MAPE: 206.3047790655566 Pearson Correlation: 0.10309218646363646 Spearman Correlation: 0.03354405915285727 Coefficient of Determination: -2.4988092848984143 RMSE: 0.38926703757763836 NRMSE: 0.37818250826052247 MAPE: 1722.8920106760736 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: RandomForests Pearson Correlation: 0.5690810501848717 Spearman Correlation: 0.47472690173348225 Coefficient of Determination: 0.18704544026109882 RMSE: 0.1729320743480303 NRMSE: 0.11140735986344358 MAPE: 143.3631381411542 Pearson Correlation: 0.2043417826563727 Spearman Correlation: 0.2613823115001434 Coefficient of Determination: 0.03344580474033321 RMSE: 0.20459763059670585 NRMSE: 0.19877163400404724 MAPE: 206.95344395878564 Protein: CDKN2A Protein Interaction Partners Count: 612 x_train_column_count: 605 x_train columns: ['ABCC1', 'ABL1', 'ACAP1', 'ACAP2', 'ACP5', 'ACTA1', 'ACTB', 'ACTG1', 'ADAMTS9', 'ADAP1', 'AFP', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD12', 'ANXA5', 'AP3D1', 'AP3S1', 'AP3S2', 'APAF1', 'APBA1', 'APBA2', 'ARAP1', 'ARAP2', 'ARF1', 'ARF3', 'ARF4', 'ARF5', 'ARF6', 'ARFGAP1', 'ARFGAP3', 'ARFIP2', 'ARFRP1', 'ARID1A', 'ARID2', 'ARID5B', 'ARL10', 'ARL1', 'ARL2', 'ARL3', 'ARL4A', 'ARL5A', 'AR', 'ASAP1', 'ATM', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'AXIN1', 'BAP1', 'BCL2L11', 'BCL2L1', 'BCL6', 'BECN1', 'BIRC5', 'BMI1', 'BRAF', 'BRCA1', 'BRCA2', 'BUB1B', 'RGCC', 'C1QBP', 'RABL6', 'CACNA1G', 'CADM1', 'CAMK1D', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNL1', 'CD274', 'CD34', 'CD44', 'CDC123', 'CDC20', 'CDC25A', 'CDC25C', 'CDC42', 'CDC45', 'CDC5L', 'CDC6', 'CDC7', 'CDH13', 'CDH17', 'CDH1', 'CDH2', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5RAP3', 'CDK6', 'CDK7', 'CDKAL1', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDX2', 'CEACAM5', 'CEBPB', 'CEBPE', 'CHEK1', 'CHEK2', 'CHFR', 'CHKA', 'COMMD1', 'CRABP1', 'CREBBP', 'CSF1R', 'CSF1', 'CSF2', 'CTBP1', 'CTBP2', 'CTCF', 'CTLA4', 'CTNNB1', 'CTSK', 'CUL1', 'CUL3', 'CXCR4', 'CYCS', 'CYLD', 'CYTH1', 'CYTH2', 'CYTH3', 'DAB2IP', 'DAP', 'DAXX', 'DICER1', 'DIRAS3', 'DLEC1', 'DMTF1', 'DNAH3', 'DNMT1', 'DNMT3A', 'DNMT3B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EBF1', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EP300', 'EPCAM', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ETS1', 'ETV6', 'EWSR1', 'EZH1', 'EZH2', 'FAT1', 'FBXW7', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FKBP2', 'FLT3', 'FMN2', 'FN1', 'FOS', 'FOXA1', 'FOXM1', 'FOXN2', 'FOXO1', 'FOXO3', 'FTO', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GATA4', 'GATA5', 'GBF1', 'GDF15', 'GGA1', 'GGA2', 'GGA3', 'GIT1', 'GIT2', 'GLI1', 'GLTSCR2', 'GMNN', 'GNA11', 'GNAQ', 'GNAS', 'GNL3', 'GOLPH3', 'GP5', 'GSPT1', 'GSTP1', 'H2AFX', 'H2AFZ', 'H3F3A', 'H3F3B', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC9', 'HELLS', 'HGF', 'HHEX', 'HIC1', 'HIF1A', 'HIST1H2BA', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AA3', 'HIST2H2AC', 'HIST2H4A', 'HIST4H4', 'HLTF', 'HMGA2', 'HNF4A', 'HNRNPD', 'HOPX', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA4', 'HSPA9', 'HUWE1', 'ID1', 'IDH1', 'IDH2', 'IGF1R', 'IGF1', 'IGF2BP2', 'IGF2R', 'IGF2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING4', 'INS', 'IQSEC1', 'IRS1', 'ISOC2', 'ITGAM', 'JAK1', 'JAK2', 'JAK3', 'JAZF1', 'JUNB', 'JUN', 'KAT2B', 'KAT5', 'KCNJ11', 'KCNQ1', 'KDM1A', 'KDM2B', 'KDM6A', 'KDM6B', 'KDR', 'KEAP1', 'KIAA1549', 'KIT', 'KLF4', 'KRAS', 'KRT19', 'KRT20', 'KRT5', 'KRT7', 'LATS2', 'LOX', 'LRRK2', 'MACROD2', 'MAF', 'MAP2K1', 'MAP2K4', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MAX', 'MC1R', 'MCL1', 'MCM10', 'MCM2', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEN1', 'MEOX1', 'MEOX2', 'MET', 'MGMT', 'MITF', 'MKRN1', 'MLANA', 'MLH1', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT3', 'MME', 'MMP2', 'MMP7', 'MMP9', 'MOV10', 'MRAS', 'MSH2', 'MSH6', 'MTA1', 'MTAP', 'MTHFR', 'MTNR1B', 'MTOR', 'MUC1', 'MYBL2', 'MYCL', 'MYCN', 'MYC', 'MYOD1', 'KAT6A', 'NANOG', 'NCAM1', 'NCL', 'NCOR1', 'NES', 'NEUROG1', 'NF1', 'NF2', 'NFATC1', 'NFE2L2', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NPM1', 'NRAS', 'NSUN2', 'ORC4', 'ORC5', 'OSBP2', 'P2RY8', 'PA2G4', 'PALB2', 'PARP1', 'PAX3', 'PAX5', 'PAX8', 'PBRM1', 'PCGF2', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PEX19', 'PGR', 'PHLDB1', 'PI3', 'PIAS2', 'PIGF', 'PIK3CA', 'PIK3R1', 'PIP4K2A', 'PLEKHA3', 'PLEKHA8', 'PLEK', 'PLK1', 'PMAIP1', 'PML', 'PMS2', 'POTEF', 'POU5F1', 'PPARA', 'PPARG', 'PPM1D', 'PPP1R9B', 'PPP3CA', 'PRDM2', 'PRMT6', 'PROM1', 'PRSS1', 'PSMC3', 'PSMD10', 'PSME3', 'PTCH1', 'PTEN', 'PTER', 'PTF1A', 'PTGS2', 'PTPN11', 'PTPRC', 'PTPRD', 'PXN', 'RAB11A', 'RAB5A', 'RABEP1', 'RABGEF1', 'RAC2', 'RAD51', 'RAF1', 'RAP2B', 'RARB', 'RASSF1', 'RASSF2', 'RB1', 'RBL1', 'RBL2', 'RCC1', 'RELA', 'RELB', 'REL', 'RET', 'RHOA', 'DROSHA', 'RNF2', 'RNF43', 'ROS1', 'RPL11', 'RPRM', 'RPS27A', 'RPS6KB1', 'RRAS2', 'RRAS', 'RTEL1', 'RUNX2', 'RUNX3', 'SDHC', 'SENP1', 'SENP3', 'SERPINE1', 'SERTAD1', 'SETD2', 'SFN', 'SFRP1', 'SFRP2', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SIX2', 'SKP2', 'SLC30A8', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SNAI1', 'SNAI2', 'SNCA', 'SOCS1', 'SOX2', 'SP1', 'SPEN', 'SRC', 'STAT1', 'STAT3', 'STK11', 'STK25', 'STK33', 'STMN1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUV39H1', 'SUZ12', 'SYNE1', 'SYP', 'TBL1XR1', 'TBRG1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TERT', 'TET2', 'TFDP1', 'TFPI2', 'TGFBR2', 'THADA', 'THBS1', 'TIMP3', 'TMCO1', 'TMEM115', 'TNFRSF10B', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TRADD', 'TRIM28', 'TRIP12', 'PRSS58', 'TSC2', 'TSPAN8', 'TTF1', 'TWIST1', 'TWSG1', 'TYR', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2I', 'UBE3A', 'UCHL1', 'USP7', 'UTF1', 'VEGFA', 'VHL', 'WDTC1', 'WEE1', 'WFS1', 'WHSC1', 'WIF1', 'WRN', 'WT1', 'WWOX', 'XRCC1', 'YY1', 'ZBTB17', 'ZBTB7A', 'ZEB1', 'ZFP91', 'ZNF148', 'ZNF217', 'ZNF227', 'ZNF410', 'ZNF420', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 5.991530439532569e-15 NRMSE: 1.3544773232807885e-15 MAPE: 8.698535217560253e-12 Pearson Correlation: 0.13008060916260422 Spearman Correlation: 0.14508659708973928 Coefficient of Determination: -7.230603833922434 RMSE: 1.809346419247516 NRMSE: 0.5451480624427586 MAPE: 646.8277902561076 Predictor: ElasticNet Pearson Correlation: 0.4922571242451761 Spearman Correlation: 0.35441668821009636 Coefficient of Determination: 0.15403477001243515 RMSE: 0.6198793489416201 NRMSE: 0.1401332313646705 MAPE: 235.63277635528362 Pearson Correlation: 0.4767637572931126 Spearman Correlation: 0.2938515442835946 Coefficient of Determination: 0.14490690834553022 RMSE: 0.5831933659437735 NRMSE: 0.17571357816925987 MAPE: 134.00764357609737 Predictor: RandomForests Pearson Correlation: 0.6873680498249779 Spearman Correlation: 0.6297196272054022 Coefficient of Determination: 0.4621442326374321 RMSE: 0.4942695162171567 NRMSE: 0.11173720271666251 MAPE: 178.0013051338801 Pearson Correlation: 0.6006430571555817 Spearman Correlation: 0.5016203464141189 Coefficient of Determination: 0.34018642908131047 RMSE: 0.5122907309142629 NRMSE: 0.15435092826582192 MAPE: 134.0557593536924 Protein: TP53 Protein Interaction Partners Count: 1000 x_train_column_count: 991 x_train columns: ['ABCB1', 'ABCC1', 'ABL1', 'ACTB', 'ACTL6A', 'ADAM17', 'AFP', 'AGT', 'AICDA', 'AIFM2', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD2', 'ANXA1', 'ANXA2', 'ANXA5', 'APAF1', 'APBB1', 'APC', 'APEX1', 'APOBEC3B', 'APP', 'ARID1A', 'ARID3A', 'AR', 'ASF1A', 'ASXL1', 'ATF2', 'ATF3', 'ATG7', 'ATM', 'ATN1', 'ATRIP', 'ATRX', 'ATR', 'ATXN3', 'AURKA', 'AURKB', 'AXIN1', 'AXL', 'BACE1', 'BAG1', 'BAG2', 'BAIAP2L1', 'BAK1', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2A1', 'BCL2L11', 'BCL2L12', 'BCL2L14', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BID', 'BIRC3', 'BIRC5', 'BIRC6', 'BLM', 'BMF', 'BMI1', 'BMX', 'BNIP3L', 'BNIP3', 'BRCA1', 'BRCA2', 'BRCC3', 'BRD1', 'BRD4', 'BRD7', 'BRE', 'BRIP1', 'BRPF1', 'BRPF3', 'BTG2', 'BTK', 'BUB1B', 'BUB1', 'RHNO1', 'RGCC', 'RMI2', 'CNOT11', 'SETD9', 'CA9', 'CABIN1', 'CABLES1', 'CAPN1', 'CARM1', 'CASP10', 'CASP1', 'CASP2', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBX2', 'CBX4', 'CBX6', 'CBX8', 'CCDC106', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNG2', 'CCNH', 'CCNK', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CD24', 'CD274', 'CD34', 'CD40LG', 'CD40', 'CD44', 'CD82', 'CDC20', 'CDC25A', 'CDC25C', 'CDH17', 'CDH1', 'CDK12', 'CDK13', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CEACAM5', 'CEBPB', 'CENPJ', 'CFL1', 'CFLAR', 'CHD3', 'CHD4', 'CHD8', 'CHEK1', 'CHEK2', 'CHUK', 'CISH', 'CITED2', 'CLSPN', 'CLU', 'CNOT10', 'CNOT1', 'CNOT2', 'CNOT3', 'CNOT4', 'CNOT6L', 'CNOT6', 'CNOT7', 'CNOT8', 'COPS5', 'CREB1', 'CREBBP', 'CRYAB', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK1G1', 'CSNK1G2', 'CSNK1G3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTCF', 'CTGF', 'CTNNB1', 'CUL4A', 'CUL7', 'CUL9', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP1A1', 'DACH1', 'DAPK1', 'DAP', 'DAXX', 'DDB1', 'DDB2', 'DDIT4', 'DDX17', 'DDX3X', 'DDX5', 'DECR1', 'DGCR8', 'DHCR24', 'DHFR', 'DIABLO', 'DICER1', 'DKK1', 'DMTF1', 'DNA2', 'DNAJA3', 'DNAJB1', 'DNMT1', 'DNMT3A', 'DNTT', 'DPYD', 'DRAM1', 'DTL', 'DUSP1', 'DUSP2', 'DYRK1A', 'DYRK2', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EEF1A1', 'EEF1A2', 'EGFR', 'EGF', 'EGR1', 'EHMT1', 'EHMT2', 'EI24', 'EIF2AK2', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4EBP1', 'ELANE', 'ELAVL1', 'ELL3', 'ELL', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHA3', 'EPHB2', 'ERBB2', 'ERBB4', 'ERCC1', 'ERCC2', 'ERCC3', 'ERCC6', 'ESR1', 'ETS1', 'ETS2', 'EWSR1', 'EXO1', 'EZH2', 'F2', 'FADD', 'AMER1', 'FAM175B', 'FANCC', 'FANCD2', 'FASLG', 'FAS', 'FBL', 'FBXO11', 'FBXO4', 'FBXW7', 'FGF1', 'FGF2', 'FGFR3', 'FHIT', 'FHL2', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FSCN1', 'FUT4', 'FZR1', 'G3BP1', 'G6PD', 'GADD45A', 'GADD45B', 'GADD45G', 'GAPDH', 'GATAD2A', 'GATAD2B', 'GDF15', 'GFI1', 'GLS2', 'GLTSCR2', 'GNL3', 'GRAMD4', 'GRB10', 'GRB14', 'GSK3B', 'GSTP1', 'GTF2H1', 'GTSE1', 'H1F0', 'H2AFX', 'HAMP', 'HCK', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC5', 'HDAC7', 'HDAC8', 'HDAC9', 'HERC5', 'HIC1', 'HIF1A', 'HIPK1', 'HIPK2', 'HIPK3', 'HIPK4', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HK2', 'HMGA1', 'HMGA2', 'HMGB1', 'HMGB2', 'HMMR', 'HMOX1', 'HNF4A', 'HNRNPK', 'HNRNPL', 'HOXA5', 'HPGDS', 'HRAS', 'HSF1', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA1A', 'HSPA1B', 'HSPA1L', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'HSPB1', 'HSPB2', 'HTT', 'HUS1', 'HUWE1', 'ICAM1', 'ID2', 'ID4', 'IDH1', 'IDH2', 'IFI16', 'IFNAR1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IGFBP7', 'IKBKB', 'IL17A', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING2', 'ING3', 'ING4', 'ING5', 'INSIG1', 'INS', 'IRF1', 'ISG15', 'ITPKB', 'JAG1', 'JAK2', 'JMY', 'JUN', 'KAT2A', 'KAT2B', 'KAT5', 'KDM1A', 'KDM6A', 'KDM6B', 'KDR', 'KHDRBS1', 'CCAR2', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KPNA2', 'KRAS', 'KRT14', 'KRT17', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'L3MBTL1', 'LAMA4', 'LEP', 'LGALS7B', 'LGALS7', 'LIF', 'LIG4', 'LIN28A', 'PIDD1', 'LRRK2', 'LYN', 'MAF1', 'MAF', 'MAGEA2', 'MAP1LC3B', 'MAP2K1', 'MAP2K3', 'MAP2K7', 'MAP3K1', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MBD3', 'MCL1', 'MCM7', 'MDC1', 'MDH1', 'MDM2', 'MDM4', 'MEAF6', 'MECOM', 'MELK', 'MET', 'MGMT', 'MIF', 'MKI67', 'MKRN1', 'MLH1', 'KMT2D', 'KMT2C', 'MMP13', 'MMP1', 'MMP2', 'MMP9', 'MOV10', 'MRE11A', 'MSH2', 'MSH6', 'MSX1', 'MT1A', 'MT2A', 'MTA1', 'MTA2', 'MTA3', 'MTOR', 'MUC1', 'MUTYH', 'MYBBP1A', 'MYB', 'MYCN', 'MYC', 'MYOCD', 'KAT8', 'KAT6A', 'NANOG', 'NBN', 'NCL', 'NCOA3', 'NCOR1', 'NCOR2', 'NDN', 'NDRG1', 'NEDD8', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFE2L2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NFKBIB', 'NFYA', 'NFYB', 'NFYC', 'NGFR', 'NKX2-1', 'NLK', 'NLRC4', 'NME1', 'NOC2L', 'NOS3', 'NOTCH1', 'NOTCH3', 'NOTCH4', 'NOX4', 'NPM1', 'NQO1', 'NR1I2', 'NR2E1', 'NR3C1', 'NR4A1', 'NR4A2', 'NRAS', 'NUAK1', 'NUMB', 'NUPR1', 'OGG1', 'OLIG2', 'OPN1SW', 'OSGIN1', 'OTUB1', 'OTUB2', 'OTUD5', 'PADI4', 'PALB2', 'PARK2', 'PARK7', 'PARP1', 'PATZ1', 'PAX2', 'PAX3', 'PAX8', 'PBK', 'PBRM1', 'PCBP4', 'PCNA', 'PDCD4', 'PDCD5', 'PDGFRA', 'PDGFRB', 'PDLIM7', 'PER2', 'PERP', 'PGR', 'PHB', 'PHC1', 'PHC2', 'PHC3', 'PHF20', 'PHGDH', 'PI3', 'PIAS1', 'PIAS2', 'PIAS4', 'PIK3CA', 'PIN1', 'PKM', 'PLAGL1', 'PLAU', 'PLK1', 'PLK2', 'PLK3', 'PLK4', 'PMAIP1', 'PML', 'PMS2', 'POLI', 'POLK', 'POU4F1', 'POU4F2', 'POU5F1', 'PPARGC1A', 'PPARG', 'PPIF', 'PPM1D', 'PPP1R13B', 'PPP1R13L', 'PPP1R15A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R4', 'PPP2R5C', 'PRDM1', 'PRDM2', 'PRDX1', 'PRELID1', 'PRIMA1', 'PRKAA1', 'PRKAA2', 'PRKAB1', 'PRKAB2', 'PRKAG1', 'PRKAG2', 'PRKAG3', 'PRKCA', 'PRKCD', 'PRKCZ', 'PRKD1', 'PRKDC', 'PRKG1', 'PRMT1', 'PRMT5', 'PROM1', 'PSEN1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTBP1', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2', 'PTTG1', 'RABGGTA', 'RABGGTB', 'RAD17', 'RAD1', 'RAD50', 'RAD51', 'RAD9A', 'RAD9B', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP4', 'RBBP6', 'RBBP7', 'RBBP8', 'RBL1', 'RBL2', 'RBM38', 'RBPJ', 'RCHY1', 'RCOR1', 'RECQL4', 'RELA', 'REM1', 'REST', 'RET', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RFFL', 'RFWD2', 'RING1', 'RMI1', 'DROSHA', 'RNF20', 'RNF2', 'RNF34', 'RNF43', 'ROCK1', 'RPA1', 'RPA2', 'RPA3', 'RPL11', 'RPL22', 'RPL26', 'RPL5', 'RPRM', 'RPS14', 'RPS19', 'RPS27A', 'RPS27L', 'RPS3', 'RPS6KB1', 'RQCD1', 'RRAD', 'RRM2B', 'RRM2', 'RUNX2', 'RUNX3', 'S100A2', 'S100A4', 'S100A6', 'S100B', 'SALL4', 'SCO2', 'SDHC', 'SENP1', 'SENP3', 'SERPINB5', 'SERPINE1', 'SESN1', 'SESN2', 'SESN3', 'SETD2', 'SETD7', 'SETD8', 'SETDB1', 'SFN', 'SRSF1', 'SGK1', 'SHFM1', 'SHH', 'SHISA5', 'SIK1', 'SIN3A', 'SIN3B', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SKP2', 'SLC2A14', 'SLC2A1', 'SLC2A2', 'SLC2A3', 'SLC6A6', 'SLMO1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMG1', 'SMG7', 'SMYD2', 'SNAI1', 'SNAI2', 'SOCS1', 'SOCS3', 'SOD2', 'SORT1', 'SOX2', 'SOX4', 'SP100', 'SP1', 'SP3', 'SP7', 'SPATA18', 'SPP1', 'SQSTM1', 'SRC', 'SREBF1', 'SREBF2', 'SSRP1', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STEAP3', 'STK11', 'STMN1', 'STUB1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUMO4', 'SUPT16H', 'SUV39H1', 'SUZ12', 'SYK', 'SYP', 'TADA3', 'TAF10', 'TAF11', 'TAF12', 'TAF13', 'TAF15', 'TAF1L', 'TAF1', 'TAF2', 'TAF3', 'TAF4B', 'TAF4', 'TAF5', 'TAF6', 'TAF7L', 'TAF7', 'TAF9B', 'TBPL1', 'TBPL2', 'TBP', 'TCHP', 'TCP1', 'TDG', 'TERT', 'TET2', 'TFAM', 'TFAP2A', 'TFAP2C', 'TFDP1', 'TFF1', 'TGFB1', 'TGM2', 'THBS1', 'TIMP3', 'TLR3', 'TLR9', 'TMEM219', 'TNFAIP3', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF10C', 'TNFRSF10D', 'TNF', 'TNK2', 'TNKS1BP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOE1', 'TOP1', 'TOP2A', 'TOP3A', 'TOPBP1', 'TOPORS', 'TP53AIP1', 'TP53BP1', 'TP53BP2', 'TP53I3', 'TP53INP1', 'TP53RK', 'TP63', 'TP73', 'TPT1', 'TPX2', 'TRAF6', 'TRIAP1', 'TRIM24', 'TRIM28', 'TRIM29', 'TRIM32', 'TRIM59', 'TRIM8', 'TRRAP', 'TSC2', 'TTC5', 'TTK', 'TWIST1', 'TWIST2', 'TXN', 'TYMS', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2D1', 'UBE2E1', 'UBE2I', 'UBE2K', 'UBE2N', 'UBE2Q1', 'UBE2S', 'UBE3A', 'UBN1', 'UCHL1', 'UHRF1', 'USF1', 'USP10', 'USP15', 'USP24', 'USP3', 'USP42', 'USP7', 'UTP14A', 'VEGFA', 'VHL', 'VPRBP', 'VRK1', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WWOX', 'XAF1', 'XIAP', 'XPA', 'XPO1', 'XRCC1', 'XRCC5', 'XRCC6', 'YBX1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'YY1', 'YY2', 'ZBTB33', 'ZBTB7A', 'ZEB1', 'ZEB2', 'ZKSCAN4', 'ZNF148', 'ZNF274', 'ZNF385A', 'ZNF420', 'ZNF668', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 2.276580678481329e-15 NRMSE: 5.471234507285098e-16 MAPE: 4.55727906265053e-12 Pearson Correlation: 0.35156662428335905 Spearman Correlation: 0.32935323383084586 Coefficient of Determination: -1.0546272360489084 RMSE: 0.6189585718565752 NRMSE: 0.19641995806568138 MAPE: 556.0574754348067 Predictor: ElasticNet Pearson Correlation: 0.4543522999912945 Spearman Correlation: 0.4628063499299909 Coefficient of Determination: 0.16368812118870302 RMSE: 0.4116343745254434 NRMSE: 0.0989267903209429 MAPE: 637.9902185241398 Pearson Correlation: 0.43976449689515823 Spearman Correlation: 0.38676043342186317 Coefficient of Determination: 0.1564048927410594 RMSE: 0.39660856379234655 NRMSE: 0.12585953407982564 MAPE: 190.42561388568348 Predictor: RandomForests Pearson Correlation: 0.662956796174116 Spearman Correlation: 0.5906003485941796 Coefficient of Determination: 0.36976787832351343 RMSE: 0.35733682059310323 NRMSE: 0.08587763051985178 MAPE: 704.1431686987754 Pearson Correlation: 0.5662325870207273 Spearman Correlation: 0.4523373109390392 Coefficient of Determination: 0.2646481304992504 RMSE: 0.3702905781747266 NRMSE: 0.11750779962386601 MAPE: 215.6468964503368 Protein: CTNNB1 Protein Interaction Partners Count: 992 x_train_column_count: 984 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACAN', 'ACP1', 'ACTA1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTN4', 'ACVR1B', 'ACVR1', 'ADAM10', 'ADCY7', 'ADIPOQ', 'AES', 'AFP', 'AHI1', 'AHR', 'AHSA1', 'AJAP1', 'AK9', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'ALPL', 'AMHR2', 'AMH', 'ANXA5', 'AP1M1', 'APC2', 'APCS', 'APC', 'APH1A', 'APH1B', 'AQP1', 'ARHGAP10', 'ARHGAP21', 'ARHGAP32', 'ARHGEF4', 'ARID1A', 'ARID2', 'ARMC7', 'ARMC8', 'ARVCF', 'ARX', 'AR', 'ASCL1', 'ASF1A', 'ASH2L', 'ASIP', 'ATF4', 'ATM', 'AURKA', 'AXIN1', 'AXIN2', 'BAG3', 'BCAR1', 'BCL2L1', 'BCL3', 'BCL6', 'BCL9L', 'BCL9', 'BDNF', 'BGLAP', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BMPR1B', 'BNIP2', 'BRAF', 'BRCA1', 'BRCA2', 'BRMS1L', 'BTRC', 'HILPDA', 'AK8', 'CA2', 'CA9', 'CABLES1', 'CACYBP', 'CALM1', 'CALM3', 'CARM1', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBLL1', 'CBL', 'CBY1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CD24', 'CD34', 'CD40', 'CD44', 'CDC27', 'CDC42', 'CDC73', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH16', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH26', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDHR5', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK8', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDON', 'CDX1', 'CDX2', 'CEBPA', 'CHD8', 'CHRD', 'CHUK', 'CITED1', 'CKAP5', 'CLCA1', 'CLDN3', 'CLDN5', 'COL1A1', 'COPS3', 'COPS5', 'COPS6', 'CREB1', 'CREBBP', 'CRKL', 'CRK', 'CRP', 'CRYAB', 'CSNK1A1L', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK2A3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNAL1', 'CTNNBIP1', 'CTNND1', 'CTNND2', 'CTTN', 'CUL1', 'CUL4A', 'CUL4B', 'CXCR4', 'CXXC4', 'DAB2', 'DACT1', 'DACT2', 'DACT3', 'DCT', 'DCX', 'DDB1', 'DDX39A', 'DDX3X', 'DDX5', 'DHODH', 'DHX9', 'DKK1', 'DKK2', 'DKK3', 'DKK4', 'DLG1', 'DLG2', 'DLG4', 'DLG5', 'DLGAP1', 'DLL4', 'DLX1', 'DNM2', 'DNMT1', 'DPYD', 'DSC1', 'DSC2', 'DSC3', 'DSG1', 'DSG2', 'DSG3', 'DSG4', 'DSP', 'DUSP6', 'DVL1', 'DVL2', 'DVL3', 'E2F3', 'ECM1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'ELAVL1', 'EMD', 'ENAH', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHB2', 'EPHB3', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EXOC3', 'EXOC4', 'EYA4', 'EZH2', 'EZR', 'F2RL2', 'FAF1', 'AMER1', 'FANCA', 'FASLG', 'FAS', 'FAT1', 'FAT4', 'FBXW11', 'FBXW7', 'FERMT2', 'FER', 'FGF10', 'FGF13', 'FGF2', 'FGF3', 'FGF4', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FLT3', 'FMN1', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC2', 'FOXG1', 'FOXL1', 'FOXL2', 'FOXM1', 'FOXN3', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FRAT1', 'FRAT2', 'FRZB', 'FSCN1', 'FSTL1', 'FSTL3', 'FURIN', 'FUS', 'FXR1', 'FYN', 'FZD10', 'FZD1', 'FZD2', 'FZD3', 'FZD4', 'FZD5', 'FZD6', 'FZD7', 'FZD8', 'FZD9', 'GAPDH', 'GATA2', 'GATA4', 'GCG', 'GDF2', 'GDNF', 'GFRA1', 'GJA1', 'GLI1', 'GLI2', 'GLI3', 'GLIS2', 'GLUL', 'GNA11', 'GNA12', 'GNA13', 'GNAQ', 'GNAS', 'GPC3', 'GRIA2', 'GRIP1', 'GSK3A', 'GSK3B', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HAS2', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC7', 'HERC5', 'HES7', 'HGF', 'HGS', 'HHEX', 'HIC1', 'HIF1A', 'HINT1', 'HIPK2', 'HIST1H1C', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HMGB1', 'HNF1A', 'HNF4A', 'HNRNPA1', 'HNRNPA2B1', 'HNRNPK', 'HNRNPM', 'HOXA10', 'HOXB4', 'HPGD', 'HRAS', 'HSP90AB1', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPD1', 'HTRA1', 'HTT', 'HUWE1', 'IBSP', 'IDH1', 'IDH2', 'IFNB1', 'IFRD1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP4', 'IHH', 'IKBKB', 'IL6', 'CXCL8', 'ILK', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IRF3', 'ISG15', 'ISL1', 'ITGAE', 'ITGB1', 'ITGB7', 'ITK', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'AJUBA', 'JUN', 'JUP', 'KANK1', 'KAT2A', 'KAT2B', 'KAT5', 'KCNN1', 'KCTD1', 'KDM1A', 'KDR', 'KIF18B', 'KIF3A', 'KIF5B', 'KIFC3', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KRAS', 'KREMEN1', 'KRIT1', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LATS2', 'LDB1', 'LDHB', 'LDLR', 'LEF1', 'LEO1', 'LGR4', 'LGR5', 'LGR6', 'LHCGR', 'LHX8', 'LIF', 'LIMA1', 'LMNA', 'LMNB1', 'LOX', 'LRP4', 'LRP5L', 'LRP5', 'LRP6', 'LRRFIP1', 'LRRK2', 'LZTFL1', 'MACF1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8IP1', 'MAPK8', 'MAPK9', 'MDFIC', 'MDFI', 'MDK', 'MDM2', 'MED12', 'MED1', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'KMT2D', 'MLLT10', 'MLLT11', 'MLLT4', 'MLLT6', 'KMT2A', 'MME', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP25', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MRAP', 'MSH2', 'MSH6', 'MSN', 'MSX1', 'MSX2', 'MTDH', 'MTOR', 'MUC13', 'MUC1', 'MUTYH', 'MYCN', 'MYC', 'MYF5', 'MYO1D', 'MYO6', 'MYO7A', 'MYOD1', 'MYOG', 'NANOG', 'NCAM1', 'NCCRP1', 'NCOA2', 'NCSTN', 'NDP', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEURL2', 'NF1', 'NF2', 'NFAT5', 'NFKB1', 'NIT1', 'NKD1', 'NKX2-5', 'NLK', 'NME1', 'NOG', 'NONO', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR0B1', 'NR4A1', 'NR4A2', 'NR5A1', 'NR5A2', 'NRAS', 'NRIP1', 'NTRK1', 'NTRK2', 'NTRK3', 'NUDT5', 'NUMB', 'NUP153', 'NUTF2', 'OTX2', 'PAK1', 'PAK2', 'PAK3', 'PANK4', 'PARD3', 'PARD6A', 'PARK2', 'PARP1', 'PAX3', 'PAX6', 'PAX7', 'PAX8', 'PDGFRA', 'PDGFRB', 'PECAM1', 'PGK1', 'PGR', 'PHB', 'JADE1', 'PI3', 'PICK1', 'PIK3CA', 'PIK3R1', 'PIK3R2', 'PIN1', 'PIP5K1A', 'PIP5K1C', 'PITX2', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAG1', 'PLEKHA7', 'PLK1', 'PML', 'PMS2', 'POLE', 'PORCN', 'POTEF', 'POU5F1', 'PPARD', 'PPARG', 'PPM1A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R2B', 'PPP2R5A', 'PPP2R5B', 'PPP2R5C', 'PPP2R5D', 'PPP2R5E', 'PRKACA', 'PRKACB', 'PRKACG', 'PRKAR1A', 'PRKCA', 'PRKCG', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRL', 'PRMT1', 'PROC', 'PROM1', 'PROP1', 'PSEN1', 'PSEN2', 'PSENEN', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTEN', 'PTGES3', 'PTGS2', 'PTH1R', 'PTH', 'PTK2', 'PTK7', 'PTMA', 'PTN', 'PTPN11', 'PTPN13', 'PTPN1', 'PTPN6', 'PTPRB', 'PTPRC', 'PTPRF', 'PTPRG', 'PTPRJ', 'PTPRK', 'PTPRM', 'PTPRU', 'PTPRZ1', 'PVRL1', 'PVRL2', 'PXN', 'PYGO1', 'PYGO2', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RALGDS', 'RANBP3', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RAPGEF2', 'RAPGEF6', 'RAPSN', 'RARA', 'RARB', 'RARG', 'RARS', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP5', 'RBMX', 'RBPJ', 'RBX1', 'RELA', 'REM1', 'RET', 'RHOA', 'RIPK2', 'RNF220', 'RNF43', 'ROBO1', 'ROCK1', 'ROCK2', 'ROR2', 'RPRD1A', 'RPS27A', 'RPSA', 'RSPO1', 'RSPO2', 'RSPO3', 'RSPO4', 'RUNX2', 'RUNX3', 'RUVBL1', 'RUVBL2', 'RXRA', 'RYK', 'S100A4', 'S100A6', 'SALL1', 'SALL4', 'SATB1', 'SCRIB', 'SDHC', 'SERPINE1', 'SETD2', 'SETD7', 'SFN', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHFM1', 'SHH', 'SIAH1', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT6', 'SKP1', 'SLC6A3', 'SLC9A3R1', 'SLCO1B3', 'SLCO2A1', 'SLIT1', 'SLK', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD5', 'SMAD7', 'SMAD9', 'SMARCA2', 'SMARCA4', 'SMARCA5', 'SMARCB1', 'SMO', 'SMURF1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNX1', 'SOST', 'SOX10', 'SOX13', 'SOX17', 'SOX1', 'SOX2', 'SOX3', 'SOX4', 'SOX6', 'SOX7', 'SOX8', 'SOX9', 'SP1', 'SP7', 'SPAG9', 'SPATA13', 'SPEN', 'SPN', 'SPP1', 'SRC', 'STAT3', 'STK11', 'STRAP', 'STX4', 'SUFU', 'SUV39H1', 'SYP', 'TADA3', 'TAX1BP3', 'TAZ', 'TBL1XR1', 'TBL1X', 'TBX5', 'TBX6', 'TCF12', 'TCF3', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TFAP2A', 'TFCP2', 'TFF1', 'TFF2', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBR1', 'TGFBR2', 'TGM2', 'TJP1', 'TJP2', 'TLE1', 'TLE2', 'TLE3', 'TLE4', 'TNFRSF11B', 'TNFSF11', 'TNF', 'TNIK', 'TNKS2', 'TNKS', 'TNS1', 'TOB1', 'TOP2A', 'TP53', 'TRAF4', 'TRIM33', 'TRIM37', 'TRIP10', 'TRRAP', 'TSC2', 'TUBA1A', 'TWIST1', 'TYMS', 'T', 'UBA52', 'UBB', 'UBC', 'UBE2B', 'UBE2R2', 'UBE3A', 'UBR5', 'UCHL1', 'UMPS', 'UPRT', 'USP4', 'USP7', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VAV2', 'VAV3', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VHL', 'VIM', 'WDR64', 'WDTC1', 'WHSC1', 'WIF1', 'WISP1', 'WLS', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'WWTR1', 'XPO1', 'YAP1', 'YARS', 'YEATS4', 'YES1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'ZAP70', 'ZAR1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZIC3', 'ZNRF3', 'ZYX', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 3.310734079023135e-15 NRMSE: 7.996169643085536e-16 MAPE: 3.1316376034906e-12 Pearson Correlation: 0.08305848615522472 Spearman Correlation: 0.1447175151809873 Coefficient of Determination: -1.1876422143210044 RMSE: 1.1868844425511635 NRMSE: 0.24953419446454536 MAPE: 821.3229983292933 Predictor: ElasticNet Pearson Correlation: 0.5178318205037364 Spearman Correlation: 0.5014583549064654 Coefficient of Determination: 0.14943544461488223 RMSE: 0.6561209136251587 NRMSE: 0.15846800155182078 MAPE: 695.2246413009758 Pearson Correlation: 0.3977677154658463 Spearman Correlation: 0.30962730208606093 Coefficient of Determination: -0.01711698444866383 RMSE: 0.8092929233883787 NRMSE: 0.17014820523681326 MAPE: 744.7478224938495 Predictor: RandomForests Pearson Correlation: 0.6461410084604152 Spearman Correlation: 0.6459070131018553 Coefficient of Determination: 0.40205662224684124 RMSE: 0.5501235928851312 NRMSE: 0.13286725748360817 MAPE: 467.12340250751686 Pearson Correlation: 0.6714416404568353 Spearman Correlation: 0.47027768426040223 Coefficient of Determination: 0.29630819114905715 RMSE: 0.6731495154156094 NRMSE: 0.14152500113859418 MAPE: 610.5293619376868 Protein: CCNE1 Protein Interaction Partners Count: 350 x_train_column_count: 347 x_train columns: ['ABL1', 'AKT1', 'AKT2', 'AKT3', 'ALDH18A1', 'ANAPC10', 'ANAPC13', 'ANAPC1', 'ANAPC2', 'ANAPC4', 'ANAPC5', 'ANAPC7', 'ANXA5', 'ARID1A', 'AR', 'ATM', 'AURKA', 'AURKB', 'BARD1', 'BCL2L1', 'BIRC5', 'BRCA1', 'BRCA2', 'BTG2', 'BTRC', 'BUB1B', 'BUB1', 'BUB3', 'RGCC', 'MLIP', 'CABLES1', 'CALM1', 'CAPRIN1', 'CASP3', 'CASP9', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNF', 'CCNG1', 'CCNH', 'CCNK', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CDC16', 'CDC20', 'CDC23', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC26', 'CDC27', 'CDC45', 'CDC6', 'CDC7', 'CDCA2', 'CDCA5', 'CDCA8', 'CDH1', 'CDK12', 'CDK13', 'CDK14', 'CDK15', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CENPA', 'CENPE', 'CHAF1A', 'CHD1L', 'CHEK1', 'CHEK2', 'CINP', 'CKS1B', 'CKS2', 'COPS5', 'CREBBP', 'CSK', 'CTNNB1', 'CUL1', 'CUL3', 'CUL4B', 'DBF4B', 'DBF4', 'DGCR8', 'DICER1', 'DTL', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'EBNA1BP2', 'ECT2', 'EGFR', 'EGF', 'ELAVL1', 'ELSPBP1', 'EP400', 'ERBB2', 'ERBB3', 'ERBB4', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM58A', 'FAM83H', 'FBXO5', 'FBXW7', 'FEN1', 'FGFR1', 'FGFR2', 'FGFR3', 'FOXM1', 'FZR1', 'GAPDH', 'GLI1', 'GMNN', 'GSK3B', 'H1F0', 'HDAC1', 'HEATR3', 'HERC5', 'HIST1H1A', 'HIST1H1B', 'HIST1H4A', 'HRAS', 'IFNAR1', 'IGF1R', 'IGF1', 'ITPKB', 'JUN', 'KIF11', 'KIF20A', 'KIF23', 'KIF2C', 'KPNA2', 'KRAS', 'LATS2', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'GMNC', 'MAD2L1', 'MAPK3', 'MATK', 'MAX', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDM2', 'MEGF11', 'MELK', 'MKI67', 'KMT2D', 'KMT2B', 'MNAT1', 'MRE11A', 'MTOR', 'MYBL2', 'MYC', 'NBN', 'NF1', 'NFYB', 'NMI', 'NOTCH1', 'NOTCH3', 'NPAT', 'NRAS', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PARK2', 'PARP1', 'PCBP4', 'PCNA', 'PIK3CA', 'PIK3R1', 'PKMYT1', 'PLK1', 'PLK4', 'POLA1', 'POLD1', 'PPP1R1C', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R4', 'PRC1', 'PRKAR1A', 'PRKAR2A', 'PRMT5', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB10', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSMF1', 'PTEN', 'PTGDR', 'PTK6', 'PTTG1', 'RAD51', 'RAD54L', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RBX1', 'REL', 'REM1', 'RHOA', 'RHOBTB3', 'RINT1', 'RNASE1', 'RPRD1A', 'RPS27A', 'RRM1', 'RRM2', 'RRN3', 'RSF1', 'SHFM1', 'SKP1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'ST8SIA1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STK3', 'STK4', 'TARBP1', 'TCP1', 'TERF1', 'TERT', 'TFDP1', 'TK1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TPX2', 'TTK', 'TUBG1', 'TYMS', 'UBA52', 'UBB', 'UBC', 'UBE2C', 'UBE2QL1', 'UBE2S', 'UHRF2', 'WEE1', 'WEE2', 'XIAP', 'YAP1', 'ZNF217', 'ZNF33A', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.9588172046682857 Spearman Correlation: 0.851582619903705 Coefficient of Determination: 0.9193304319679054 RMSE: 0.1433764922299906 NRMSE: 0.03460107928421233 MAPE: 25.56855750955154 Pearson Correlation: 0.4615616280631038 Spearman Correlation: 0.38212197159565586 Coefficient of Determination: -0.6204238359108647 RMSE: 0.5754946986563733 NRMSE: 0.2348382839534699 MAPE: 168.54761910186951 Predictor: ElasticNet Pearson Correlation: 0.6791797428515427 Spearman Correlation: 0.6059828641261454 Coefficient of Determination: 0.37683749724808424 RMSE: 0.39849579380969824 NRMSE: 0.09616907445271092 MAPE: 69.93474941115207 Pearson Correlation: 0.6667615542930899 Spearman Correlation: 0.5556353570493399 Coefficient of Determination: 0.3714486637416503 RMSE: 0.3584242563982437 NRMSE: 0.14625979613084297 MAPE: 97.44325868583304 Predictor: RandomForests Pearson Correlation: 0.8598922666936342 Spearman Correlation: 0.7165518489905631 Coefficient of Determination: 0.7342954557399095 RMSE: 0.26020915735475864 NRMSE: 0.06279633114239898 MAPE: 55.39230221712956 Pearson Correlation: 0.8385204632334841 Spearman Correlation: 0.7085048252867513 Coefficient of Determination: 0.6938477614257615 RMSE: 0.2501472515840754 NRMSE: 0.10207592082921547 MAPE: 71.80999227462355 Protein: CCND1 Protein Interaction Partners Count: 857 x_train_column_count: 849 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTL6B', 'AFP', 'AHR', 'AKAP12', 'AKAP8', 'AKR1B10', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDOA', 'ALK', 'ANO1', 'ANXA5', 'APAF1', 'APC', 'APEX1', 'AREG', 'ARHGEF2', 'ARID1A', 'ARID1B', 'ARID2', 'ARID4A', 'AR', 'ASIP', 'ATF2', 'ATF3', 'ATF4', 'ATM', 'ATXN1', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'B2M', 'BANP', 'BARX2', 'BAX', 'BCAR1', 'BCAR3', 'BCCIP', 'BCL2A1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL3', 'BCL6', 'BCL9', 'BECN1', 'BGLAP', 'BHLHE40', 'BIRC2', 'BIRC3', 'BIRC5', 'BMI1', 'BMP4', 'BMP6', 'BRAF', 'BRCA1', 'BRCA2', 'BRD2', 'BRD4', 'BTC', 'BTG2', 'BTRC', 'RGCC', 'COPRS', 'CA9', 'CARD11', 'CARM1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBFB', 'CCDC62', 'CCL2', 'CCL5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNC', 'CCND2', 'CCND3', 'CCNDBP1', 'CCNE1', 'CCNE2', 'CCNG2', 'CCNH', 'CCNK', 'CCNL1', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CD19', 'CD22', 'CD24', 'CD34', 'CD38', 'CD44', 'CD5', 'CD79A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC6', 'CDC73', 'CDCA7L', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK12', 'CDK13', 'CDK14', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK20', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CDX2', 'CENPE', 'CEP57', 'CFLAR', 'CHEK1', 'CHEK2', 'CHKA', 'CHUK', 'CKS1B', 'CKS2', 'CLCN3', 'COL1A1', 'CR2', 'CREB1', 'CREBBP', 'CRKL', 'CRYAB', 'CSF2', 'CTBP1', 'CTGF', 'CTNNB1', 'CTNND1', 'CTTN', 'CUL1', 'CUL3', 'CUL7', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'CYR61', 'DACH1', 'DAXX', 'DDIT3', 'DDX53', 'DECR1', 'DHFR', 'DICER1', 'DKK1', 'DKK3', 'DLL1', 'DMTF1', 'DND1', 'DNMT1', 'DNMT3A', 'DNTT', 'DVL1', 'DVL2', 'DYRK1A', 'DYRK1B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EDN1', 'EEF1A1', 'EGFR', 'EGF', 'EGLN2', 'EGR1', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF3I', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4E', 'EIF4G1', 'ELAVL1', 'ELSPBP1', 'EP300', 'EPCAM', 'EPHA2', 'EPHA7', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EWSR1', 'EYA1', 'EZH2', 'FABP4', 'FADD', 'FAM58A', 'FAM83H', 'FASLG', 'FAT1', 'FBXO31', 'FBXO4', 'FBXW7', 'FBXW8', 'FGF13', 'FGF19', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FHL2', 'FIGF', 'FLCN', 'FLNA', 'FLT1', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXC1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FRZB', 'FSTL3', 'FZD1', 'FZD2', 'FZD7', 'FZD9', 'FZR1', 'GADD45A', 'GAL', 'GAPDH', 'GAST', 'GATA3', 'GATA4', 'GDF15', 'GDF2', 'GGNBP2', 'GGT1', 'GIT1', 'GJA1', 'GJB1', 'GLI1', 'GLI2', 'GLI3', 'GLTSCR2', 'GNB2L1', 'GPER1', 'GRB2', 'GREB1', 'GRM4', 'GRP', 'GSK3B', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HBEGF', 'HBZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC4', 'HEXIM1', 'HEY1', 'HGF', 'HIF1A', 'HIST1H2AA', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AH', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AC', 'HIST2H2BE', 'HIST2H4A', 'HIST4H4', 'HMGA2', 'HMOX1', 'HNF1A', 'HNF4A', 'HNRNPD', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB8', 'ICAM1', 'ID1', 'ID2', 'IFNAR1', 'IFNB1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP3', 'IGFBP5', 'IHH', 'IKBKB', 'IL10', 'IL17A', 'IL2', 'IL4', 'IL6', 'IL7', 'CXCL8', 'ILK', 'INSM1', 'INS', 'IRF1', 'IRS1', 'ISG15', 'ITGB1', 'ITPKB', 'ITPKC', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUNB', 'JUND', 'JUN', 'KAT2A', 'KAT2B', 'KDM1A', 'KDM5B', 'KDR', 'KHDRBS1', 'KIF18B', 'KIN', 'KITLG', 'KIT', 'KLF13', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KRAS', 'KRT10', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LDB3', 'LEF1', 'LEP', 'LGALS3', 'LGR5', 'LIMK2', 'LIMS1', 'LIN28B', 'LMNA', 'LMNB1', 'LOX', 'LRP5', 'LRP6', 'LYN', 'MAFB', 'MAF', 'MAML1', 'MAML2', 'MAML3', 'MAMLD1', 'MAP2K1', 'MAP2K2', 'MAP2K4', 'MAP2K7', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDK', 'MDM2', 'MDM4', 'MEN1', 'MET', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'MLXIPL', 'MME', 'MMP11', 'MMP14', 'MMP15', 'MMP1', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MNAT1', 'MOV10', 'MSH2', 'MST1', 'MTOR', 'MUC1', 'MYBL2', 'MYB', 'MYCN', 'MYC', 'MYEOV', 'MYF5', 'MYOD1', 'MYOG', 'NACA2', 'NADSYN1', 'NANOG', 'NCAM1', 'NCOA1', 'NCOA3', 'NCOR1', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NGF', 'NKX2-1', 'NME1-NME2', 'NME1', 'NME2', 'NMI', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NQO1', 'NR0B2', 'NR1H3', 'NR2E1', 'NR3C1', 'NR4A3', 'NRAS', 'NRF1', 'NUDT21', 'ODC1', 'ORAI1', 'ORAOV1', 'ORC4', 'PAK1', 'PAK4', 'PARK2', 'PARP1', 'PAX2', 'PAX5', 'PAX6', 'PBRM1', 'PBX3', 'PCNA', 'PDCD4', 'PDGFRA', 'PDGFRB', 'PDZK1', 'PECAM1', 'PELP1', 'PGR', 'PI3', 'PI4K2A', 'PIK3CA', 'PIK3R1', 'PKLR', 'PKM', 'PLAUR', 'PLAU', 'PLK1', 'PMAIP1', 'POLR2A', 'POTEF', 'POU2F1', 'POU5F1', 'PPARG', 'PPP2R4', 'PRDM5', 'PRKACA', 'PRL', 'PRMT5', 'PRNP', 'PROM1', 'PSAT1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTCHD3', 'PTEN', 'PTF1A', 'PTGS2', 'PTHLH', 'PTH', 'PTK2', 'PTK6', 'PTPN11', 'PTPRCAP', 'PTPRC', 'PXN', 'RAD51', 'RAF1', 'RALA', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RBX1', 'RCC1', 'RELA', 'RELB', 'REL', 'REM1', 'RET', 'RHEB', 'RHOA', 'RHOC', 'RICTOR', 'RNASE1', 'DROSHA', 'RND3', 'RNMT', 'ROCK1', 'RPRD1B', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KA6', 'RPS6KB1', 'RPS6', 'RPTOR', 'RREB1', 'RSF1', 'RUNX1', 'RUNX2', 'RUNX3', 'SDC1', 'SDHC', 'SENP1', 'SERPINE1', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHC1', 'SHFM1', 'SHH', 'SIRT1', 'SIX1', 'SIX3', 'SKP1', 'SKP2', 'SLC25A16', 'SLC25A6', 'SLC2A1', 'SLC35B2', 'SLC39A4', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMO', 'SNAI1', 'SNAI2', 'SNCA', 'SNIP1', 'SNW1', 'SNX33', 'SOCS3', 'SOX11', 'SOX17', 'SOX2', 'SOX4', 'SOX6', 'SOX9', 'SP1', 'SPN', 'SPP1', 'SPRY1', 'SRC', 'SREBF1', 'STAT1', 'STAT3', 'STAT4', 'STAT5A', 'STAT5B', 'STAT6', 'STC2', 'STIM1', 'STK11', 'STK24', 'STMN1', 'SUFU', 'SULF2', 'SUV39H1', 'TAF1', 'TBP', 'TBX2', 'TCEAL7', 'TCF4', 'TCF7L2', 'TCF7', 'TERT', 'TET3', 'TFDP1', 'TFF1', 'TGFA', 'TGFB1', 'TGFBR2', 'THBS1', 'THRA', 'THRB', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLR9', 'TM4SF1', 'TMPRSS4', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF8', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP2A', 'TP53', 'TP63', 'TP73', 'TRPV2', 'TSC22D3', 'TSC2', 'TWIST1', 'TXN', 'TYMS', 'UBA52', 'UBA7', 'UBB', 'UBC', 'UBE2C', 'UBTF', 'URGCP', 'USP18', 'USP2', 'USP9X', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VIP', 'VRK1', 'WDR77', 'WDTC1', 'WEE1', 'WHSC1', 'WIF1', 'WISP1', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'XBP1', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YY1', 'ZBTB17', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.0355371612000538e-15 NRMSE: 6.615920836687838e-16 MAPE: 2.4185667459906968e-12 Pearson Correlation: 0.22936007412743942 Spearman Correlation: 0.17428895622139928 Coefficient of Determination: -3.121701886253657 RMSE: 0.464918985564413 NRMSE: 0.29321328554768733 MAPE: 1113.8821100374137 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: RandomForests Pearson Correlation: 0.5853438572361938 Spearman Correlation: 0.5430399474997273 Coefficient of Determination: 0.2722733673298181 RMSE: 0.20499857263689927 NRMSE: 0.13097109201064341 MAPE: 492.47389786485513 Pearson Correlation: 0.4825186092040556 Spearman Correlation: 0.44855671517101214 Coefficient of Determination: 0.19624330619944086 RMSE: 0.20530583584564846 NRMSE: 0.1294814807301012 MAPE: 480.5397909847869 Protein: ERBB2 Protein Interaction Partners Count: 663 x_train_column_count: 657 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACPP', 'ACTA2', 'ACTB', 'ACTG1', 'ADAM10', 'ADAM17', 'ADRB2', 'AFP', 'AGRN', 'AKT1S1', 'AKT1', 'AKT2', 'ALB', 'ALDH1A1', 'ALK', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'ANO1', 'ANXA2', 'ANXA5', 'AP2B1', 'APP', 'AREG', 'ARHGEF11', 'ARHGEF12', 'ARID1A', 'ARL6IP5', 'AR', 'ATM', 'ATP2B2', 'AURKB', 'AXIN1', 'BAG1', 'BARD1', 'BCAR1', 'BCAR3', 'BCAS1', 'BCL2L11', 'BCL2L1', 'BDNF', 'BECN1', 'BEST1', 'BIRC5', 'BLNK', 'BMI1', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BSG', 'BTC', 'MIEN1', 'CA9', 'CALU', 'CARTPT', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAV1', 'CBLB', 'CBLC', 'CBL', 'CCL27', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD19', 'CD22', 'CD247', 'CD24', 'CD274', 'CD28', 'CD33', 'CD34', 'CD44', 'CD46', 'CD52', 'CD68', 'CD6', 'CD80', 'CD82', 'CDC37', 'CDC42', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK4', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CEACAM5', 'CEP70', 'CHEK2', 'CHGA', 'CHKA', 'CHKB', 'CISH', 'CLDN3', 'CLDN4', 'CLDN7', 'CLTC', 'CNN1', 'COPS5', 'CPNE3', 'CREB1', 'CRKL', 'CRK', 'YBX3', 'CSF1', 'CSF2', 'CSF3', 'CSK', 'CSPG4', 'CTAG1B', 'CTLA4', 'CTNNB1', 'CTNND1', 'CTSB', 'CTSD', 'CTTN', 'CUL5', 'CXCL12', 'CXCR1', 'CXCR4', 'CYCS', 'CYP19A1', 'CYTIP', 'DCN', 'DDX41', 'DDX53', 'DHH', 'DIAPH1', 'DICER1', 'DLG4', 'DMTF1', 'DNAJA3', 'DNM2', 'DNMT1', 'DOCK1', 'DOCK7', 'DUSP6', 'E2F1', 'E2F3', 'EEA1', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EGFR', 'EGF', 'EIF3A', 'EIF4EBP1', 'EIF4E', 'ELAVL1', 'ELF3', 'EML4', 'ENO2', 'EP300', 'EPCAM', 'EPGN', 'EPHA2', 'EPS15', 'EPX', 'ERAL1', 'ERBB2IP', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ERRFI1', 'ESCO1', 'ESR1', 'ESR2', 'ESRRB', 'ETS1', 'ETS2', 'ETV4', 'ETV6', 'EZH2', 'EZR', 'FASLG', 'FASN', 'FBXW7', 'FCGR1A', 'FCGR1B', 'FCGRT', 'FGF10', 'FGF13', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FIGF', 'FLT1', 'FLT3LG', 'FN1', 'FOLH1', 'FOLR1', 'FOS', 'FOXA1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXP3', 'FREM2', 'FSIP1', 'FYN', 'GAB1', 'GABPB1', 'GAPDH', 'GATA3', 'GATA4', 'GDF2', 'GLI1', 'GLI2', 'GLS', 'GNA11', 'GNAQ', 'GNAS', 'GNRH1', 'GPER1', 'GRAP2', 'GRB2', 'GRB7', 'GSTP1', 'GZMB', 'H2AFX', 'H2AFY', 'HBEGF', 'HDAC1', 'HDAC6', 'HEATR6', 'HGF', 'HIF1A', 'HK1', 'HLA-A', 'HMGA2', 'HNF4A', 'HOXB7', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPG2', 'ICAM1', 'ID1', 'IDH1', 'IDH2', 'IFNG', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IHH', 'IL10', 'IL2', 'IL4', 'IL6R', 'IL6ST', 'IL6', 'CXCL8', 'ILK', 'INPP4B', 'INS', 'IQGAP1', 'IQSEC1', 'IRS1', 'ITGA5', 'ITGA6', 'ITGAV', 'ITGB1', 'ITGB3', 'ITGB4', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JUN', 'JUP', 'KDR', 'KITLG', 'KLK3', 'KLRK1', 'KRAS', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'L1CAM', 'LAMP1', 'LCN2', 'LDHA', 'LEP', 'LIN28A', 'LIN7A', 'LIN7B', 'LIN7C', 'LINGO1', 'LOX', 'LRIG1', 'LRPPRC', 'MAGEA1', 'MAGEA3', 'MAGED4B', 'MAGED4', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK8', 'MATK', 'MCL1', 'MDK', 'MDM2', 'MEMO1', 'MET', 'MGMT', 'MKI67', 'MLANA', 'MLH1', 'KMT2C', 'MME', 'MMP11', 'MMP14', 'MMP16', 'MMP1', 'MMP2', 'MMP7', 'MMP9', 'MPP1', 'MRAP', 'MRAS', 'MSH2', 'MSH6', 'MSLN', 'MTA1', 'MTOR', 'MUC13', 'MUC16', 'MUC1', 'MUC4', 'MUC6', 'MUCL1', 'MYBL2', 'MYCN', 'MYC', 'NANOG', 'NCAM1', 'NCL', 'NCOA1', 'NCOA3', 'NCOR1', 'NDRG1', 'NF1', 'NF2', 'NFE2L2', 'NGF', 'NISCH', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NR1H4', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NRP1', 'NTF3', 'NTF4', 'OPCML', 'OSMR', 'PA2G4', 'PADI2', 'PAK1', 'PALB2', 'PAQR3', 'PARP1', 'PAX2', 'PCSK9', 'PDCD1LG2', 'PDCD1', 'PDCD4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PDGFRA', 'PDPN', 'PECAM1', 'PELP1', 'PEPD', 'PFKFB3', 'PGAP3', 'PGF', 'PGR', 'PI3', 'PIK3C2A', 'PIK3C2B', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIN1', 'PIP', 'PLAUR', 'PLAU', 'PLCG1', 'PLCG2', 'PLEK', 'PLG', 'PLXNB1', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPP3CA', 'PRDM10', 'PRF1', 'PRKACA', 'PRL', 'PROM1', 'PSCA', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'PTPN1', 'PTPRC', 'PTPRO', 'PTPRU', 'PTS', 'PXN', 'RAB25', 'RAD51', 'RAF1', 'RANBP2', 'RARA', 'RASA1', 'RASA2', 'RASSF1', 'RB1', 'RBPJ', 'RDX', 'RECK', 'REM1', 'REN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'S100A14', 'SCGB2A2', 'SCUBE2', 'SDC1', 'SDHC', 'SEMA3D', 'SEMA4D', 'SERPINB5', 'SERPINE1', 'SFRP1', 'PEAK1', 'SH3BGRL3', 'SH3BGRL', 'SH3TC2', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SIAH2', 'PMEL', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC4A7', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SMUG1', 'SMYD3', 'SNAI1', 'SNAI2', 'SOCS1', 'SOS1', 'SOX10', 'SOX2', 'SOX9', 'SP3', 'SPP1', 'SPRY2', 'SRCIN1', 'SRC', 'STARD3', 'STAT1', 'STAT2', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STOM', 'STUB1', 'SYP', 'TAGLN', 'TBX1', 'TERT', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TFRC', 'TGFA', 'TGFB1', 'THBS1', 'THRA', 'TIMP1', 'TJP1', 'TMPRSS2', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF4', 'TNFRSF8', 'TNFRSF9', 'TNFSF11', 'TNF', 'TNS1', 'TNS3', 'TNS4', 'TOB1', 'TOP1', 'TOP2A', 'TP53', 'TP63', 'TSC2', 'TWIST1', 'TYMS', 'TYR', 'UBA52', 'UBB', 'UBC', 'USP2', 'USP9X', 'VAV1', 'VAV2', 'VAV3', 'VCL', 'VEGFA', 'VEGFB', 'VEGFC', 'VIM', 'WASL', 'WDFY2', 'WDTC1', 'WNT10A', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7B', 'WNT9A', 'WNT9B', 'WT1', 'WWOX', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YES1', 'YY1', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 5.0383670017798094e-15 NRMSE: 8.583687414654598e-16 MAPE: 5.116939939012157e-12 Pearson Correlation: 0.5499115342918743 Spearman Correlation: 0.25287379253351067 Coefficient of Determination: -1.001465486977494 RMSE: 1.4666042032172377 NRMSE: 0.2640912239740047 MAPE: 786.7038115559039 Predictor: ElasticNet Pearson Correlation: 0.8300384567480056 Spearman Correlation: 0.6576288228727599 Coefficient of Determination: 0.4024880333290972 RMSE: 0.758166896468986 NRMSE: 0.12916620891510402 MAPE: 545.3879574698827 Pearson Correlation: 0.8149523163519906 Spearman Correlation: 0.6087739358025852 Coefficient of Determination: 0.3397101260977635 RMSE: 0.8423763998071802 NRMSE: 0.15168660636856343 MAPE: 200.25921169476447 Predictor: RandomForests Pearson Correlation: 0.8618630119517803 Spearman Correlation: 0.6834204814768784 Coefficient of Determination: 0.7353579549372533 RMSE: 0.5045694318770525 NRMSE: 0.08596170705096555 MAPE: 418.16678975069743 Pearson Correlation: 0.7929419166701542 Spearman Correlation: 0.6877087999164878 Coefficient of Determination: 0.5851963572608272 RMSE: 0.6676673719782903 NRMSE: 0.12022677494477083 MAPE: 204.04317470851737 Protein: ERBB3 Protein Interaction Partners Count: 245 x_train_column_count: 247 x_train columns: ['ADAM17', 'AGRN', 'AGTR2', 'AKT1', 'AKT2', 'AKT3', 'ALAS2', 'ALB', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'APIP', 'AREG', 'AR', 'BAMBI', 'BDNF', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BTC', 'CADM4', 'CASK', 'CASP3', 'CBLB', 'CBLC', 'CBL', 'CCND1', 'CCNE1', 'CD44', 'CD82', 'CDC42', 'CDH1', 'CDK4', 'CDK5', 'CDKN1B', 'CDKN2A', 'CLEC16A', 'COMMD5', 'COQ7', 'CRKL', 'CRK', 'CRYZL1', 'CSF1', 'CSK', 'CSPG5', 'CTNNB1', 'DCN', 'DHH', 'DOCK7', 'DUSP6', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EIF4EBP1', 'EIF4E', 'EML4', 'EPCAM', 'EPGN', 'EPN1', 'ERBB2IP', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'ESR2', 'FBXO9', 'FGF10', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FIGF', 'FKBP14', 'FLNA', 'FLT3LG', 'FN1', 'FOXA1', 'FOXO3', 'FREM2', 'FTSJ1', 'GAB1', 'GAPDH', 'GLE1', 'GRB2', 'GRB7', 'GRHL2', 'HBEGF', 'HGF', 'HGS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPG2', 'IGF1', 'IGF2', 'IL6ST', 'ILK', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'ITPKB', 'JAK1', 'JAK2', 'JUN', 'KDR', 'KITLG', 'KRAS', 'L1CAM', 'LAMA1', 'LAMB1', 'LAMC2', 'LIN7A', 'LIN7B', 'LIN7C', 'LRIG1', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARCH7', 'MDM2', 'MET', 'MITF', 'MMP9', 'MRPL49', 'MTOR', 'MUC1', 'MUC4', 'MYC', 'N4BP1', 'NDRG1', 'NEDD4L', 'NEDD4', 'NF1', 'NGF', 'NICN1', 'NOTCH1', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NTF3', 'NTF4', 'OAT', 'PA2G4', 'PARK7', 'PCSK9', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PGR', 'PI3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIP5K1C', 'PLCG1', 'PLCG2', 'PPP1R9A', 'PRKACA', 'PTEN', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN22', 'PTPN2', 'RASA1', 'RASA2', 'REM1', 'RGS4', 'RHOA', 'RHOC', 'RNF41', 'ROR1', 'RRAS2', 'SH2B3', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SLC25A16', 'SMAD4', 'SNAI2', 'SOS1', 'SOX10', 'SOX2', 'SPARC', 'SPRY2', 'SRC', 'STAT3', 'STAT5A', 'STAT5B', 'SYN3', 'TCF7L2', 'TGFA', 'TMEFF2', 'TNFRSF13C', 'TNS1', 'TP53', 'USP8', 'VAV1', 'VAV2', 'VAV3', 'VEGFA', 'VEGFB', 'VEGFC', 'WNT1', 'WNT5A', 'ZEB1', 'ZNF217', 'KRBOX4', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.7525779749217284 Spearman Correlation: 0.7414768781715668 Coefficient of Determination: 0.5663736083372897 RMSE: 0.3145773849828222 NRMSE: 0.08601614490437254 MAPE: 195.56057281263227 Pearson Correlation: 0.19103946349683806 Spearman Correlation: 0.24006034987967434 Coefficient of Determination: -1.5365174079219295 RMSE: 0.6125006341478844 NRMSE: 0.30147643768322824 MAPE: 423.5878774811695 Predictor: ElasticNet Pearson Correlation: 0.44254057437570393 Spearman Correlation: 0.4605667934702878 Coefficient of Determination: 0.09002471065872875 RMSE: 0.4557056824967473 NRMSE: 0.12460541631600965 MAPE: 228.92490292303074 Pearson Correlation: 0.3773428006126257 Spearman Correlation: 0.36020648636516667 Coefficient of Determination: 0.08159643748901646 RMSE: 0.3685567749140211 NRMSE: 0.18140582619914705 MAPE: 207.51731341371533 Predictor: RandomForests Pearson Correlation: 0.5779349321581143 Spearman Correlation: 0.5952826445215312 Coefficient of Determination: 0.3099301228298601 RMSE: 0.3968406749485059 NRMSE: 0.10850972329808019 MAPE: 233.0343291393106 Pearson Correlation: 0.42093925854669745 Spearman Correlation: 0.3463788156698109 Coefficient of Determination: 0.16506208829735813 RMSE: 0.3514104804695851 NRMSE: 0.17296631858007702 MAPE: 236.1590586353873 Fold: 5 Protein: RB1 Protein Interaction Partners Count: 369 x_train_column_count: 366 x_train columns: ['AATF', 'ABCC1', 'ABL1', 'ACTL6A', 'ACTL6B', 'AFAP1', 'AHR', 'AKT1', 'ANXA5', 'ARID1A', 'ARID1B', 'ARID4A', 'ARMCX1', 'ARMCX2', 'ARMCX3', 'ARNT', 'AR', 'ASF1A', 'ATF2', 'ATM', 'AURKB', 'BCR', 'BDP1', 'BGLAP', 'BRCA1', 'BRF1', 'FAM208A', 'C4BPA', 'CABIN1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CBFB', 'CBX1', 'CBX4', 'CBX5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNT2', 'CDC25A', 'CDC27', 'CDC6', 'CDH1', 'CDK14', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPA', 'CEBPB', 'CEBPD', 'CEBPE', 'CHEK1', 'CHEK2', 'CLNK', 'COL1A1', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUX1', 'DCAF10', 'DGKZ', 'DNAJA3', 'DNMT1', 'DNMT3A', 'DUSP1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EGFR', 'EGF', 'EID1', 'EIF2AK1', 'EIF2AK4', 'AGO2', 'ELF1', 'ENC1', 'EP300', 'ERBB2', 'ESD', 'ESR1', 'ESR2', 'EZH2', 'FBXW7', 'FMO5', 'FOS', 'FOXM1', 'FRK', 'FZR1', 'G6PD', 'GAPDH', 'GATA1', 'GJA1', 'GNB2L1', 'GRB2', 'GSC', 'GTF2H1', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HARS2', 'HARS', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC8', 'HDC', 'HES1', 'HIF1A', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HIST4H4', 'HMGA1', 'HMGA2', 'HRAS', 'HSP90AA1', 'HSPA1A', 'HSPA8', 'ID2', 'IFI16', 'INS', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'KDM2A', 'KDM4A', 'KDM5A', 'KDM5B', 'PPP1R26', 'KIF11', 'KRAS', 'KRT10', 'KRT14', 'KRT5', 'L3MBTL2', 'L3MBTL1', 'LIMD1', 'LIN52', 'LIN54', 'LIN9', 'LMNA', 'LOR', 'LPAR6', 'MAF', 'MAP2K7', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEF2C', 'MORF4L1', 'MRFAP1', 'MRPL11', 'MRPS18B', 'MSH6', 'MTL5', 'MYBL2', 'MYC', 'MYOD1', 'NACC2', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NCR1', 'NDC80', 'NEO1', 'NFYA', 'NFYB', 'NFYC', 'NGF', 'NOTCH1', 'NPM1', 'NRAS', 'ORC1', 'PA2G4', 'PAX2', 'PAX3', 'PAX5', 'PAX6', 'PAX8', 'PCNA', 'PELP1', 'PGR', 'PHB', 'PHF21B', 'PIAS4', 'PIK3CA', 'PIK3R1', 'PIK3R3', 'PLK1', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPIA', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP1R3A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R3B', 'PPRC1', 'PRB1', 'PRB3', 'PRB4', 'PRDM2', 'PRH1', 'PRH2', 'PRIM1', 'PRIM2', 'PRKCB', 'PRMT2', 'PSMA7', 'PSMC1', 'PSMD10', 'PTEN', 'PTGDR', 'RAF1', 'RB1CC1', 'RBAK', 'RBBP4', 'RBBP5', 'RBBP6', 'RBBP7', 'RBBP8', 'RBBP9', 'RBL1', 'RBL2', 'RBFOX2', 'RFC1', 'RPS6KB1', 'RUNX2', 'S100A6', 'SETD1B', 'SETD7', 'SIRT1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMC1A', 'SMC2', 'SMC4', 'SMC5', 'SMYD2', 'SNW1', 'SP100', 'SP1', 'SP3', 'SPI1', 'STAM', 'STAT3', 'SUV39H1', 'SUV420H2', 'SUZ12', 'TAF1', 'TBP', 'TERT', 'TFAP2A', 'TFDP1', 'TFDP3', 'TGM2', 'THAP1', 'TMPO', 'TNS1', 'TOP2A', 'TP53BP1', 'TP53', 'TP73', 'TRDMT1', 'TRIM27', 'TTK', 'UBE2I', 'UBE3A', 'UBL4A', 'UBN1', 'UBR4', 'UBTF', 'UHRF1', 'USP4', 'USP7', 'VEGFA', 'VPS39', 'WDR59', 'WDR73', 'WEE1', 'WWTR1', 'YAP1', 'YY1', 'ZBTB16', 'ZBTB7A', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.8043073491957689 Spearman Correlation: 0.752739189475409 Coefficient of Determination: 0.6469103119703244 RMSE: 0.13898954746172476 NRMSE: 0.06866292242567532 MAPE: 279.37974895088496 Pearson Correlation: 0.12511584270477738 Spearman Correlation: 0.12261250140276066 Coefficient of Determination: -8.482605621557381 RMSE: 0.7401900285291166 NRMSE: 0.3732075653596579 MAPE: 1835.1537016746931 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: RandomForests Pearson Correlation: 0.6340763493930155 Spearman Correlation: 0.5201141554191631 Coefficient of Determination: 0.19381013396512958 RMSE: 0.21001885728233907 NRMSE: 0.10375246749743806 MAPE: 132.01027999309287 Pearson Correlation: 0.0005679193949936507 Spearman Correlation: 0.12012369231536554 Coefficient of Determination: -0.12763289130124789 RMSE: 0.2552485321927606 NRMSE: 0.12869760411469688 MAPE: 406.3067706836569 Protein: CDH1 Protein Interaction Partners Count: 834 x_train_column_count: 826 x_train columns: ['ABCB1', 'ABCG2', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTR3', 'ACVR1B', 'ADAM10', 'ADAM15', 'ADAM17', 'ADAM9', 'AFP', 'AIMP1', 'AJAP1', 'AKAP9', 'AKT1', 'AKT2', 'AKTIP', 'ALB', 'ALCAM', 'ALDH1A1', 'ALDH3A1', 'ALK', 'AMOTL2', 'ANAPC4', 'ANAPC7', 'ANO1', 'ANXA2', 'ANXA5', 'AP1M1', 'AP1M2', 'APC2', 'APC', 'AQP1', 'AQP5', 'AREG', 'ARF6', 'ARHGAP31', 'ARID1A', 'ARL2BP', 'ARMC7', 'ARPC1A', 'ARPC2', 'ARRB2', 'ARVCF', 'AR', 'CLMP', 'ASF1A', 'ATF2', 'ATF3', 'ATM', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BAG3', 'BANP', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL6B', 'BCL9L', 'BCORL1', 'BMI1', 'BMP2', 'BMP4', 'BMP6', 'BMP7', 'BNIP3', 'BRCA1', 'BRCA2', 'BSG', 'BTBD7', 'BTC', 'BTF3', 'ANAPC15', 'CA2', 'CA9', 'CALCA', 'CALR', 'CAPN1', 'CAPNS1', 'CASP3', 'CASP8', 'CASP9', 'CASS4', 'CAV1', 'CBLL1', 'CBL', 'CBX7', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CCR7', 'CD1A', 'CD1B', 'CD1C', 'CD1E', 'CD207', 'CD24', 'CD274', 'CD276', 'CD2AP', 'CD34', 'CD44', 'CD46', 'CD68', 'CD82', 'CDC16', 'CDC23', 'CDC27', 'CDC42', 'CDC6', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH24', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK14', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN3', 'CDX2', 'CEACAM5', 'CFL1', 'CGN', 'CHGA', 'CHL1', 'CLCA2', 'CLDN1', 'CLDN2', 'CLDN3', 'CLDN4', 'CLDN5', 'CLDN7', 'CNTN1', 'COL1A1', 'CORO1C', 'CRB3', 'CREB1', 'CREBBP', 'CRYAB', 'YBX3', 'CSDC2', 'CSE1L', 'CSF2', 'CSNK2A1', 'CSNK2A2', 'CST5', 'CTBP1', 'CTBP2', 'CTCF', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTSL', 'CTTN', 'CXCL12', 'CXCL1', 'CXCR4', 'CYP1B1', 'DAAM1', 'DAB2IP', 'DACH1', 'DAPK1', 'DAP', 'DDR1', 'DDR2', 'DDX3X', 'DICER1', 'DKK1', 'DLC1', 'DLG1', 'DLG5', 'DNM2', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOT1L', 'DPAGT1', 'DPEP1', 'DSP', 'DUOX1', 'DUSP4', 'DVL1', 'DVL2', 'E2F1', 'ECT2', 'EDN1', 'EFEMP1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'EHD1', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'ELAVL1', 'ELF3', 'ENAH', 'ENG', 'EP300', 'EPB41L3', 'EPCAM', 'EPHA10', 'EPHA1', 'EPHA2', 'EPPK1', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ESRP1', 'ESRP2', 'ETS1', 'ETS2', 'EXOC3', 'EXOC4', 'EYA2', 'EZH2', 'EZR', 'F11R', 'F2RL2', 'SUPT20H', 'FBXL5', 'FER', 'FGF10', 'FGF13', 'FGF17', 'FGF19', 'FGF2', 'FGF4', 'FGF5', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FMN1', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC1', 'FOXC2', 'FOXJ2', 'FOXK2', 'FOXL1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXQ1', 'FRMPD2', 'FSCN1', 'FUT4', 'FXYD5', 'FYN', 'FZD1', 'FZD4', 'FZD7', 'FZR1', 'G6PD', 'GAB2', 'GABPA', 'GADD45A', 'GAPDH', 'GAS6', 'GATA1', 'GATA3', 'GATA4', 'GATA6', 'GDNF', 'GFRA1', 'GGT1', 'GJA1', 'GJB1', 'GJB2', 'GKN2', 'GLI1', 'GLI2', 'GMNN', 'GNA12', 'GNA13', 'GNB2L1', 'GNL3', 'GPA33', 'GRB2', 'GRHL2', 'GRHL3', 'GSK3B', 'GSN', 'GSTP1', 'H2AFZ', 'HAVCR2', 'HBEGF', 'HDAC1', 'HDAC2', 'HEPACAM', 'HES1', 'HGF', 'HGS', 'HIF1A', 'HMGA2', 'HNF4A', 'HOXB4', 'HOXD10', 'HPGDS', 'HPGD', 'HRAS', 'HSP90AA1', 'HSPA5', 'ICAM1', 'ID1', 'ID2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP3', 'IL10', 'IL15', 'IL17A', 'IL1B', 'IL24', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IQSEC1', 'IRS1', 'IRS2', 'ITGA5', 'ITGA6', 'ITGAE', 'ITGAM', 'ITGB1', 'ITGB4', 'ITGB7', 'ITPKB', 'IVL', 'JAG1', 'JAK2', 'AJUBA', 'JUN', 'JUP', 'KDM1A', 'KDM6A', 'KDR', 'KEAP1', 'KIFC3', 'KIT', 'KLF4', 'KLF5', 'KLF8', 'KLK3', 'KLK7', 'KLRG1', 'KRAS', 'KRT10', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'KRT9', 'LAMA1', 'LAMB1', 'LAMC2', 'LASP1', 'LATS1', 'LATS2', 'LCN2', 'LEF1', 'LEP', 'LGALS3', 'LGALS4', 'LGALS9', 'LGR5', 'LIF', 'LIMA1', 'LIN28A', 'LIPG', 'LLGL2', 'LMNA', 'LOR', 'LOXL2', 'LOXL3', 'LOX', 'LRP5', 'LRP6', 'LY6K', 'MACC1', 'MACROD1', 'MAD2L2', 'MAGI1', 'MAP2K1', 'MAP2K7', 'MAP4K5', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARK2', 'MARVELD2', 'MCAM', 'MCL1', 'MDM2', 'MED1', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGAT5', 'MGMT', 'MKI67', 'MLH1', 'MLLT4', 'MME', 'MMP11', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP1', 'MMP25', 'MMP27', 'MMP2', 'MMP3', 'MMP7', 'MMP8', 'MMP9', 'MPP5', 'MRAP', 'MSH2', 'MSN', 'MT1G', 'MTA1', 'MTA3', 'MTBP', 'MTDH', 'MTOR', 'MUC1', 'MUC4', 'MYCN', 'MYC', 'MYH6', 'MYO6', 'MYO7A', 'NANOG', 'NCAM1', 'NCOA1', 'NCSTN', 'NDRG1', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEUROG3', 'NF2', 'NFE2L2', 'NFIC', 'NKD2', 'NKX2-1', 'NKX6-1', 'NKX6-2', 'NME1', 'NOG', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NR2F1', 'NRP2', 'NUDT21', 'NUMBL', 'NUMB', 'NUP98', 'NUTF2', 'OTUB1', 'OVOL1', 'OVOL2', 'PARD3', 'PARD6A', 'PAX2', 'PAX5', 'PAX6', 'PAX8', 'PCSK9', 'PDCD4', 'PDGFRB', 'PDPN', 'PEBP1', 'PECAM1', 'PGR', 'PHLPP1', 'PI3', 'PIK3CA', 'PIK3R1', 'PIP5K1A', 'PIP5K1C', 'PIP', 'PIR', 'PITX1', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAUR', 'PLAU', 'PLCD1', 'PLEKHA7', 'PLG', 'PODXL', 'POLR2C', 'POSTN', 'POTEF', 'POU5F1', 'PPARA', 'PPARGC1A', 'PPARG', 'PPL', 'PPP6C', 'PRAME', 'PRDM10', 'PRKAR1A', 'PRKCA', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRKG1', 'PRMT5', 'PROC', 'PROM1', 'PRSS8', 'PSEN1', 'PTCH1', 'PTEN', 'PTF1A', 'PTGS2', 'PTK2', 'PTPN11', 'PTPN14', 'PTPRC', 'PTPRF', 'PTPRJ', 'PTPRM', 'PTPRS', 'PTPRT', 'PTPRU', 'PTRH2', 'PVRL1', 'PVRL2', 'PVR', 'PXN', 'RAB11A', 'RAB25', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RACGAP1', 'RAF1', 'RALA', 'RALBP1', 'RALGDS', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RARB', 'RASSF1', 'RB1', 'RBM4', 'RCOR1', 'RDX', 'REM1', 'RET', 'RHOA', 'RHOB', 'RHOC', 'RHOD', 'RICTOR', 'RND3', 'ROCK1', 'ROCK2', 'RPS6KB1', 'RPTOR', 'RRM2', 'RUNX2', 'RUNX3', 'S100A14', 'S100A4', 'S100A8', 'SATB1', 'SCRIB', 'SDC1', 'SDC4', 'SDHC', 'SELE', 'SELL', 'SELP', 'SEMA3C', 'SEMA3F', 'SENP1', 'SERPINB4', 'SERPINB5', 'SERPINE1', 'SFN', 'SFRP1', 'SFRP2', 'SFTPC', 'SHH', 'SIK1', 'SIN3A', 'SIRT1', 'SIRT2', 'SIRT4', 'SIRT7', 'SIX1', 'SIX2', 'SKIL', 'SKP2', 'SLC2A1', 'SLC39A6', 'SLC6A3', 'SLC9A3R1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SNAI1', 'SNAI2', 'SNAI3', 'SNX16', 'SNX1', 'SOX10', 'SOX17', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPARC', 'SPDEF', 'SPINT1', 'SPP1', 'SPRY1', 'SRCIN1', 'SRC', 'SRXN1', 'ST14', 'ST7L', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STX4', 'STYK1', 'SUCLG2', 'SUMO1', 'SUZ12', 'SYNJ2', 'SYP', 'TACC3', 'TACSTD2', 'TATDN1', 'TBX1', 'TBX3', 'TCF15', 'TCF4', 'TDGF1', 'TERT', 'TET2', 'TFF1', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBI', 'TGFBR1', 'TGFBR2', 'THBS1', 'THEM4', 'THUMPD1', 'THY1', 'TIAM1', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLN1', 'TLR4', 'TMPRSS2', 'TMPRSS4', 'TNFRSF6B', 'TNF', 'TNK2', 'TNS1', 'TP53BP1', 'TP53BP2', 'TP53', 'TRIM21', 'TRIM29', 'TRIM44', 'TRIP10', 'TRPS1', 'TSPYL2', 'TWIST1', 'TWIST2', 'TYRP1', 'T', 'UBE2I', 'UBE2S', 'USP48', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VEZT', 'VHL', 'VIM', 'VIPAS39', 'VPS33B', 'VTN', 'WASL', 'WDFY2', 'WDTC1', 'WIF1', 'WISP1', 'WISP3', 'WNT10A', 'WNT10B', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT9A', 'WNT9B', 'WT1', 'XIAP', 'YAP1', 'YBX1', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 5.039726412032665e-15 NRMSE: 8.024786490928099e-16 MAPE: 2.867055090873331e-12 Pearson Correlation: 0.25935986111995585 Spearman Correlation: 0.2582850160226437 Coefficient of Determination: -1.6409294815923188 RMSE: 1.8879489832498397 NRMSE: 0.37127076817561894 MAPE: 3342.2611702606596 Predictor: ElasticNet Pearson Correlation: 0.6970345019845451 Spearman Correlation: 0.6559063635196158 Coefficient of Determination: 0.3904147017269156 RMSE: 0.8791919584071229 NRMSE: 0.13999426107562224 MAPE: 185.52322337764733 Pearson Correlation: 0.5249112670739349 Spearman Correlation: 0.5605581116971534 Coefficient of Determination: 0.23327985190182787 RMSE: 1.0172560701613997 NRMSE: 0.20004642389754376 MAPE: 823.1471739699132 Predictor: RandomForests Pearson Correlation: 0.7885670056090667 Spearman Correlation: 0.7251947284938849 Coefficient of Determination: 0.616190367243626 RMSE: 0.6976287983896842 NRMSE: 0.11108385057636447 MAPE: 131.10984239377112 Pearson Correlation: 0.6418643616930466 Spearman Correlation: 0.6048379655606679 Coefficient of Determination: 0.40309934912659806 RMSE: 0.8975587360488559 NRMSE: 0.17650758806097344 MAPE: 314.617302586031 Protein: CDH2 Protein Interaction Partners Count: 472 x_train_column_count: 467 x_train columns: ['ABCG2', 'ABL1', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTR3', 'ADAM10', 'ADH1A', 'AFP', 'AHSG', 'AKT1', 'AKT3', 'ALB', 'ALCAM', 'ALDH1A1', 'AMBN', 'AMELX', 'AMOTL1', 'AMTN', 'ANGPT1', 'ANO8', 'ANXA5', 'APC2', 'APC', 'APLP2', 'APOA1', 'APOA2', 'APOA5', 'APOB', 'APOE', 'APOL1', 'APPL1', 'APP', 'ARHGAP32', 'ARMC7', 'ARPC5', 'ARVCF', 'AR', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BCL2L1', 'BDNF', 'BMI1', 'BMP15', 'BMP2', 'BMP4', 'BMP7', 'BNIP2', 'BOC', 'BPIFB2', 'RGCC', 'GSKIP', 'C3', 'C4A', 'CABLES1', 'CADM1', 'CALU', 'CASP3', 'CAV1', 'CBLL1', 'CCNA2', 'CCNB1', 'CCND1', 'CD24', 'CD34', 'CD44', 'CD80', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK4', 'CDK5', 'CDK6', 'CDKN2A', 'CDON', 'CDX2', 'CEBPZ', 'CFL1', 'CHGB', 'CHL1', 'CHRDL1', 'CKAP4', 'CLDN11', 'CLDN3', 'CLDN4', 'CLDN7', 'CORT', 'CP', 'CREBBP', 'CRP', 'CSF1', 'CSK', 'CST3', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTTN', 'CXCL12', 'CXCR4', 'CYLD', 'CYR61', 'DBN1', 'DDR1', 'DDR2', 'DKK1', 'DLG4', 'DLG5', 'DMP1', 'DNAJC3', 'DSP', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EFNB2', 'EFNB3', 'EGFR', 'EGF', 'EHMT2', 'EIF2AK3', 'ENAM', 'ENG', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA4', 'EPHB2', 'EPS8', 'ERBB2', 'ERBB4', 'ESR1', 'ESRP1', 'EXOC4', 'EZH2', 'EZR', 'F11R', 'F5', 'EVA1A', 'FAM20A', 'FAM20C', 'FBN1', 'FER', 'FGA', 'FGF13', 'FGF23', 'FGF2', 'FGFR1', 'FGFR4', 'FGG', 'FN1', 'FOXC2', 'FOXD3', 'FOXO1', 'FOXP4', 'FSTL1', 'FSTL3', 'FUCA2', 'GAA', 'GAPDH', 'GAS6', 'GATA4', 'GFAP', 'GJA10', 'GJA1', 'GJA3', 'GJB6', 'GJC1', 'GJC3', 'GJD3', 'GJD4', 'GLI1', 'GOLM1', 'GPC3', 'GRIA1', 'GRIA2', 'HGF', 'HMGA2', 'HNF4A', 'HRAS', 'HRC', 'HSP90B1', 'HSPA5', 'IARS2', 'IGF1R', 'IGF1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL1B', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'INVS', 'IQGAP1', 'ISL1', 'ITGA6', 'ITGB1', 'ITIH2', 'ITPKB', 'JAG1', 'JAM3', 'JUN', 'JUP', 'KCNA5', 'KDR', 'KIAA2022', 'KIF5B', 'KIT', 'KLF4', 'KNG1', 'KRAS', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT8', 'KTN1', 'L1CAM', 'LAMB1', 'LAMB2', 'LAMC1', 'LEF1', 'LGALS1', 'LRP5', 'LRP6', 'LRRC7', 'LTBP1', 'LTBP3', 'MAP1B', 'MAP2K6', 'MAP2K7', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MATN3', 'MBTPS1', 'MCAM', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEPE', 'MET', 'MFGE8', 'MFI2', 'MGAT4A', 'MIA3', 'MKI67', 'MLLT4', 'MMP14', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MPDZ', 'MPP5', 'MRAP', 'MRPL49', 'MSLN', 'MSN', 'MTHFD1', 'MUC1', 'MUC4', 'MXRA8', 'MYC', 'MYO10', 'MZF1', 'NANOG', 'NCAM1', 'NCSTN', 'NDRG1', 'NENF', 'NES', 'NFASC', 'NGF', 'NKX2-5', 'NLGN1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTUM', 'NRCAM', 'NT5C', 'NT5E', 'NTRK2', 'NUCB1', 'NUMBL', 'NUMB', 'OLFM3', 'P4HB', 'PARD3', 'PAX6', 'PCSK9', 'PC', 'PDGFRB', 'PDIA4', 'PDIA6', 'PECAM1', 'PENK', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PITX2', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PNPLA2', 'POU5F1', 'PPT2', 'PRKCDBP', 'PRKCSH', 'PROC', 'PROM1', 'PRPH', 'PRSS23', 'PSEN1', 'PTEN', 'PTK2', 'PTPN11', 'PTPN1', 'PTPN2', 'PTPRC', 'PTPRS', 'PVRL1', 'PVRL2', 'PVRL3', 'PXN', 'QSOX1', 'RAB11FIP1', 'RAB3D', 'RAB5A', 'RAC1', 'RCN1', 'RELN', 'REM1', 'RHOA', 'RHOB', 'RHOC', 'ROBO1', 'PTBP3', 'RPS6KB1', 'RUNX2', 'S100A14', 'S100A4', 'SARS2', 'SCARB2', 'SCG2', 'SCG3', 'SDC2', 'SEMA3A', 'SENP3', 'SERPINA10', 'SERPINA1', 'SERPINC1', 'SERPIND1', 'SERPINE1', 'SHH', 'SHISA5', 'SIRT7', 'SKP1', 'SLC2A1', 'SLC9A3R1', 'SLIT1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SNAI1', 'SNAI2', 'SNAI3', 'SOX10', 'SOX18', 'SOX1', 'SOX2', 'SOX4', 'SOX9', 'SP7', 'SPAG9', 'SPARCL1', 'SPARC', 'SPP1', 'SPP2', 'SRC', 'ST6GALNAC5', 'STAT3', 'STC2', 'SYP', 'TBX1', 'TCF3', 'TEK', 'TF', 'TGFB1', 'TGFBR1', 'TGM2', 'TGOLN2', 'THY1', 'TIMP1', 'TJP1', 'TJP3', 'TMEM132A', 'TNC', 'TNF', 'TNNT1', 'TP53', 'TRPS1', 'TSC2', 'TWIST1', 'TWIST2', 'USP9X', 'VANGL2', 'VCAM1', 'VCAN', 'VCL', 'VEGFA', 'VGF', 'VIM', 'VTN', 'VWA1', 'WFS1', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7A', 'XIRP1', 'ZBTB16', 'ZEB1', 'ZEB2', 'ZSCAN1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.957620210282954 Spearman Correlation: 0.9455075383606956 Coefficient of Determination: 0.9170364671423684 RMSE: 0.10344346315653845 NRMSE: 0.050804706623711234 MAPE: 960.3187939186316 Pearson Correlation: 0.18861470900534333 Spearman Correlation: 0.1565383066352501 Coefficient of Determination: -24.23309541655265 RMSE: 2.0951575260529993 NRMSE: 0.7834854163203259 MAPE: 43812.40700386539 Predictor: ElasticNet Pearson Correlation: 0.17449404408831024 Spearman Correlation: 0.17373365666170454 Coefficient of Determination: 0.000378320400970078 RMSE: 0.3590684659357265 NRMSE: 0.17635109569064705 MAPE: 196.58522501894112 Pearson Correlation: -0.006867263096900187 Spearman Correlation: -0.05665913123501111 Coefficient of Determination: -0.015500864996650598 RMSE: 0.4203117829972017 NRMSE: 0.15717584391197265 MAPE: 598.241230985296 Predictor: RandomForests Pearson Correlation: 0.6021582315836356 Spearman Correlation: 0.5617286652517202 Coefficient of Determination: 0.20085054070881014 RMSE: 0.32105056459340875 NRMSE: 0.15767917322008188 MAPE: 536.6719195525947 Pearson Correlation: 0.10266061103142113 Spearman Correlation: 0.14329622974889847 Coefficient of Determination: -0.007535790577082979 RMSE: 0.4186601816746719 NRMSE: 0.15655822660459282 MAPE: 1426.542024985386 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.5673091310268191 Spearman Correlation: 0.5626739259885083 Coefficient of Determination: 0.3218396501464047 RMSE: 0.1678037765176248 NRMSE: 0.11772729452041926 MAPE: 709.9636165398703 Pearson Correlation: 0.3311861135941639 Spearman Correlation: 0.42593299168318816 Coefficient of Determination: -0.15607735928306377 RMSE: 0.24019355052723323 NRMSE: 0.21670490578878665 MAPE: 496.547590583947 Predictor: ElasticNet Pearson Correlation: 0.3318604773889917 Spearman Correlation: 0.38172853614085894 Coefficient of Determination: 0.0035206132399563383 RMSE: 0.20340877914422772 NRMSE: 0.14270695062596658 MAPE: 136.92678760887392 Pearson Correlation: 0.36115887394931395 Spearman Correlation: 0.37482013491440047 Coefficient of Determination: -0.003681989712543521 RMSE: 0.2238030286986052 NRMSE: 0.20191722110322646 MAPE: 107.69315780126504 Predictor: RandomForests Pearson Correlation: 0.5532215556161209 Spearman Correlation: 0.5652630676722618 Coefficient of Determination: 0.26825766681949326 RMSE: 0.17430691798156686 NRMSE: 0.1222897499449731 MAPE: 575.6799278137305 Pearson Correlation: 0.4392656012482198 Spearman Correlation: 0.4789660718961583 Coefficient of Determination: 0.17143896120733582 RMSE: 0.20334343131470894 NRMSE: 0.18345837775034865 MAPE: 212.27010258558812 Protein: PTEN Protein Interaction Partners Count: 884 x_train_column_count: 876 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ABTB1', 'ACTB', 'ACTG1', 'ADM', 'AEBP1', 'AFP', 'AKT1S1', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'AMHR2', 'ANXA2', 'ANXA5', 'APAF1', 'APC', 'ARAF', 'AREG', 'ARHGAP21', 'ARID1A', 'ARID2', 'ARL2BP', 'AR', 'ATF3', 'ATG12', 'ATG5', 'ATG7', 'ATM', 'ATRX', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'AXL', 'BAD', 'BAG5', 'BARD1', 'BAX', 'BBC3', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BIRC3', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BNIP3', 'BRAF', 'BRCA1', 'BRCA2', 'BRD4', 'BTG2', 'BTK', 'SPRTN', 'CLHC1', 'CA9', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBL', 'CBX7', 'CCL2', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD24', 'CD274', 'CD34', 'CD44', 'CD79A', 'CD79B', 'CDC14A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC7', 'CDH17', 'CDH1', 'CDH2', 'CDIPT', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CENPC', 'CFL1', 'CFLAR', 'CFTR', 'CHD1', 'CHD8', 'CHEK1', 'CHEK2', 'CHKA', 'CHORDC1', 'CHUK', 'CLTCL1', 'CLTC', 'CNOT6L', 'CREB1', 'CREBBP', 'CRP', 'CSF1R', 'CSF1', 'CSK', 'CSN2', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTGF', 'CTLA4', 'CTNNB1', 'CUL1', 'CUL3', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'DAPK1', 'DAXX', 'DBN1', 'DCAF13', 'DDIT4', 'DDR2', 'DECR1', 'DEPTOR', 'DGCR8', 'DICER1', 'DLC1', 'DLG1', 'DLG4', 'DNM1L', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOLPP1', 'DUSP1', 'DUSP6', 'DUT', 'DVL1', 'DYRK1A', 'E2F1', 'E2F2', 'E2F3', 'ECSCR', 'EGFR', 'EGF', 'EGR1', 'EIF2AK2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4EBP2', 'EIF4E', 'EIF4G1', 'EML4', 'ENDOG', 'EP300', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA3', 'EPHA4', 'EPHA5', 'EPHA7', 'EPHB1', 'EPHB2', 'EPHB3', 'EPHB4', 'ERBB2', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ESR1', 'ETS1', 'ETS2', 'ETV1', 'ETV6', 'EYA2', 'EZH2', 'EZR', 'FABP4', 'FASLG', 'FASN', 'FBXW7', 'FCGR1B', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FIG4', 'FKBP1A', 'FLCN', 'FLT1', 'FLT3', 'FLT4', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXG1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FOXP3', 'FRK', 'FYN', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GCK', 'GDF10', 'GDF2', 'GFAP', 'GJA1', 'GLI1', 'GNA11', 'GNAQ', 'GNAS', 'GNRHR', 'GRASP', 'GRB2', 'GRPR', 'GSK3A', 'GSK3B', 'GSTP1', 'H1F0', 'H2AFX', 'HAVCR2', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HES1', 'HGF', 'HIF1A', 'HIST1H2BA', 'HK1', 'HK2', 'HMGA2', 'HNF4A', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA1A', 'HSPA1B', 'HSPA2', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'ID1', 'ID4', 'IDH1', 'IDH2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL17A', 'IL21', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INPP4A', 'INPP4B', 'INPP5A', 'INPP5B', 'INPP5D', 'INPP5E', 'INPP5F', 'INPP5J', 'INPP5K', 'INPPL1', 'INSRR', 'INSR', 'INS', 'IPMK', 'IPO11', 'IQGAP1', 'IRAK1', 'IRS1', 'IRS2', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'ITPR3', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUN', 'KAT2B', 'KDM5B', 'KDM5C', 'KDM6A', 'KDR', 'KEAP1', 'ATG13', 'KIF11', 'KLLN', 'KITLG', 'KIT', 'KLF17', 'KLF2', 'KLF4', 'KLK3', 'KPNA1', 'KPNA2', 'KPNA5', 'KPNA6', 'KPNA7', 'KRAS', 'KRT14', 'KRT5', 'KRT8', 'LASP1', 'LATS1', 'LATS2', 'LCK', 'LDHA', 'LEF1', 'LEP', 'LGALS3', 'LIG4', 'LOX', 'LRIG1', 'LRP1B', 'LRRK2', 'LYN', 'LYPD1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAN2C1', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K3', 'MAP2K4', 'MAP2K7', 'MAP3K1', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK4', 'MAPK6', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAP1', 'MAPT', 'MARCH2', 'MARCH3', 'MAST1', 'MAST2', 'MAST3', 'MAST4', 'MATK', 'MCL1', 'MCM2', 'MCM7', 'MCRS1', 'MDK', 'MDM2', 'MDM4', 'MECOM', 'MECP2', 'MED12', 'MEN1', 'MET', 'MGMT', 'MINPP1', 'MITF', 'MKI67', 'MKRN1', 'MLH1', 'MLH3', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT1', 'MLST8', 'MME', 'MMP2', 'MMP9', 'MOV10', 'MRAP', 'MRE11A', 'MSH2', 'MSH6', 'MTDH', 'MTMR2', 'MTOR', 'MTSS1', 'MUTYH', 'MVP', 'MYCN', 'MYC', 'MYLK', 'MYOCD', 'NANOG', 'NCKAP1', 'NCOA3', 'NCOR2', 'NDFIP1', 'NDFIP2', 'NDRG1', 'NDRG2', 'NEDD4L', 'NEDD4', 'NES', 'NF1', 'NF2', 'NFATC1', 'NFATC4', 'NFE2L2', 'NFKBIA', 'NGFR', 'NKX3-1', 'NLGN3', 'NLGN4X', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR1H4', 'NR3C2', 'NRAS', 'NRP2', 'NTRK1', 'NTRK2', 'NUMB', 'OCRL', 'OLIG2', 'OTUD3', 'PALB2', 'PARD3', 'PARD6A', 'PARD6B', 'PARD6G', 'PARK2', 'PARK7', 'PARP1', 'PAX8', 'PBK', 'PBRM1', 'PCGF2', 'PCSK9', 'PDCD1', 'PDCD4', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PDK1', 'PDK2', 'PDPK1', 'PDZK1', 'PECAM1', 'PGM3', 'PGR', 'PHF6', 'PHLPP1', 'PHLPP2', 'PI3', 'PI4K2A', 'PI4K2B', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIK3R5', 'PIKFYVE', 'PINK1', 'PIP4K2A', 'PIP4K2B', 'PIP4K2C', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PIP5KL1', 'PKM', 'PLCB1', 'PLCB2', 'PLCB3', 'PLCB4', 'PLCD1', 'PLCD3', 'PLCD4', 'PLCE1', 'PLCG1', 'PLCG2', 'PLCH1', 'PLCH2', 'PLCZ1', 'PLEKHA1', 'PLEK', 'PLK1', 'PLK2', 'PLK3', 'BPIFA1', 'PMAIP1', 'PML', 'PMPCA', 'PMS1', 'PMS2', 'POLE', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPM1D', 'PPP2R1A', 'PPP2R4', 'PPP2R5A', 'PPP2R5E', 'PPP3CA', 'PPP6C', 'PRDX1', 'PREX2', 'PRKAA1', 'PRKAA2', 'PRKCI', 'PRKCZ', 'PRKDC', 'PRMT5', 'PROM1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTER', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPMT1', 'PTPN11', 'PTPN12', 'PTPN13', 'PTPN1', 'PTPRC', 'PTPRD', 'PTS', 'PXN', 'RAB7A', 'RAC1', 'RAC2', 'RAD51C', 'RAD51D', 'RAD51', 'RAD52', 'RAF1', 'RASA1', 'RASSF1', 'RB1CC1', 'RB1', 'RBL1', 'RBL2', 'RBM38', 'RBFOX2', 'RCN1', 'RECK', 'RELA', 'REL', 'REM1', 'RETN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'DROSHA', 'RNF146', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KB1', 'RPS6KB2', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'RRM1', 'RSL1D1', 'RUNX3', 'RWDD3', 'SACM1L', 'SALL4', 'SCAI', 'SCGB1D4', 'SCRIB', 'SDHB', 'SDHC', 'SERPINA1', 'SERPINA4', 'SERPINB5', 'SESN1', 'SESN2', 'SETD2', 'SGK1', 'SGK2', 'SGK3', 'SHANK2', 'SHARPIN', 'SHC1', 'SHFM1', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT5', 'SIRT6', 'SIRT7', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC2A4', 'SLC34A2', 'SLC9A3R1', 'SLC9A3R2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNCA', 'SNX27', 'SOCS1', 'SOCS3', 'SOD2', 'SOS1', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPOP', 'SPRY1', 'SPRY2', 'SRBD1', 'SRC', 'SREBF1', 'SRF', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STMN1', 'STUB1', 'STX16', 'SUCLG2', 'SUMO1', 'SYK', 'SYNJ1', 'SYNJ2', 'TACSTD2', 'TBX1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TEP1', 'TERT', 'TET1', 'TGFB1', 'TGFBR1', 'TGFBR2', 'TGM2', 'THBS1', 'TIMP1', 'TIMP3', 'TJP1', 'TLR4', 'TMEM55A', 'TMEM55B', 'TMPRSS2', 'TNFRSF10B', 'TNFSF10', 'TNF', 'TNKS2', 'TNKS', 'TNPO2', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TPM1', 'TRAF6', 'TRIM27', 'TRIM29', 'TSC1', 'TSC2', 'TTN', 'TUT1', 'TWIST1', 'TWSG1', 'TXN', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2E1', 'UBE2I', 'UBE2L3', 'UBE3A', 'ULK1', 'ULK2', 'USP10', 'USP13', 'USP18', 'USP28', 'USP7', 'USP8', 'UTF1', 'UVRAG', 'VCL', 'VDR', 'VEGFA', 'VHL', 'WDR18', 'WDTC1', 'WEE1', 'WIPI1', 'WIPI2', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT9A', 'WNT9B', 'WT1', 'WWP1', 'WWP2', 'XIAP', 'XPO1', 'XPO5', 'YAP1', 'YES1', 'YWHAB', 'YWHAZ', 'YY1', 'ZEB1', 'ZEB2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.9623206180321536e-15 NRMSE: 4.631882758239627e-16 MAPE: 3.559702660285906e-12 Pearson Correlation: 0.2683048510176021 Spearman Correlation: 0.2781555879749124 Coefficient of Determination: -1.142103595308523 RMSE: 1.0562814931467859 NRMSE: 0.20432557512124455 MAPE: 2914.9472422281156 Predictor: ElasticNet Pearson Correlation: 0.3818416092741808 Spearman Correlation: 0.3903909042476109 Coefficient of Determination: 0.04820098316290744 RMSE: 0.555144369102423 NRMSE: 0.08680234056796544 MAPE: 319.49179294889234 Pearson Correlation: 0.36586860470196736 Spearman Correlation: 0.43124477861319976 Coefficient of Determination: 0.03188185403702404 RMSE: 0.7101067090046902 NRMSE: 0.13736202201421585 MAPE: 374.337129941963 Predictor: RandomForests Pearson Correlation: 0.583943117832684 Spearman Correlation: 0.5486244683326287 Coefficient of Determination: 0.2918667854306157 RMSE: 0.4788404119275386 NRMSE: 0.07487145835783576 MAPE: 265.0430365616203 Pearson Correlation: 0.36465827677182217 Spearman Correlation: 0.42090313410669816 Coefficient of Determination: 0.12179672007937525 RMSE: 0.6763273699304017 NRMSE: 0.13082779517378554 MAPE: 389.50128558337383 Protein: BRCA2 Protein Interaction Partners Count: 361 x_train_column_count: 351 x_train columns: ['ABL1', 'ACHE', 'ADRB1', 'ADRB2', 'AKT1', 'ALK', 'APEX1', 'ARID1A', 'ARPC1A', 'AR', 'ATAD5', 'ATM', 'ATRIP', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'B3GALTL', 'BACH1', 'BARD1', 'BCCIP', 'BCHE', 'BDNF', 'BECN1', 'BIRC5', 'BLM', 'BMI1', 'BRCA1', 'BRCC3', 'BRE', 'BRIP1', 'SLX4', 'BUB1B', 'BUB1', 'BUB3', 'SFR1', 'RHNO1', 'RMI2', 'BABAM1', 'MMS22L', 'CASC1', 'CASC5', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCNE1', 'CDC25A', 'CDC25C', 'CDC45', 'CDC6', 'CDH1', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CENPE', 'CENPF', 'CEP55', 'CHEK1', 'CHEK2', 'CHRNA1', 'CLSPN', 'CNTROB', 'CREM', 'CSMD3', 'CTNNB1', 'CYP19A1', 'DMC1', 'DNA2', 'DSN1', 'DYNC1LI2', 'EGFR', 'EGF', 'ELAC2', 'EME1', 'EME2', 'ENAM', 'EPCAM', 'ERBB2', 'ERBB3', 'ERCC1', 'ERCC2', 'ERCC4', 'ERCC5', 'ERCC6', 'ERCC8', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM175A', 'FANCA', 'FANCB', 'FANCC', 'FANCD2', 'FANCE', 'FANCF', 'FANCG', 'FANCI', 'FANCL', 'FANCM', 'FBN1', 'FBXO18', 'FBXW7', 'FEN1', 'FGFR2', 'FHIT', 'FLNA', 'FOXM1', 'GAPDH', 'GEN1', 'SLX1B', 'H2AFX', 'HELQ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HMG20A', 'HMG20B', 'HMMR', 'HNRNPC', 'HOXB13', 'HRAS', 'HUS1', 'ITPKB', 'KAT2B', 'KAT5', 'KEAP1', 'SPIDR', 'KIF23', 'KIF4A', 'KIT', 'KLK3', 'KRAS', 'KRT5', 'LIG1', 'LIG3', 'LIG4', 'LIMD1', 'LSP1', 'MAD2L2', 'MAGED1', 'MAMSTR', 'MAP2K2', 'MAP3K1', 'MCM10', 'MCPH1', 'MDC1', 'MDM2', 'MDM4', 'MEN1', 'MGMT', 'MKI67', 'MLH1', 'MLH3', 'KMT2C', 'MND1', 'MORF4L1', 'MRE11A', 'MRPL36', 'MSH2', 'MSH3', 'MSH4', 'MSH5', 'MSH6', 'MTA2', 'FAN1', 'MUC1', 'MUS81', 'MUTYH', 'MYC', 'NBN', 'NCAPG', 'NEDD4', 'NF1', 'NHEJ1', 'NNT', 'NOTCH1', 'NSL1', 'NSMCE4A', 'OBFC1', 'OGG1', 'PALB2', 'PARG', 'PARP1', 'PARP2', 'PARP3', 'PAXIP1', 'PCNA', 'PDLIM7', 'PDS5A', 'PDS5B', 'PGR', 'PIK3CA', 'PLCB4', 'PLEC', 'PLEKHH1', 'PLK1', 'PMS1', 'PMS2', 'PNOC', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'POLN', 'POLQ', 'PRDM9', 'PRKDC', 'PRSS1', 'PSMC3IP', 'PSMD3', 'PSMD6', 'PTEN', 'RAD17', 'RAD18', 'RAD1', 'RAD21', 'RAD23B', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD52', 'RAD54B', 'RAD54L', 'RAD9A', 'RAD9B', 'RAG2', 'RASSF1', 'RBBP8', 'RBMX', 'RECQL4', 'RECQL5', 'RECQL', 'RET', 'REV1', 'REV3L', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RNF168', 'RNF8', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SKP2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCAL1', 'SMARCB1', 'SMC1A', 'SMC2', 'SMC3', 'SMC4', 'SMC5', 'SMC6', 'SMUG1', 'SNAI2', 'SP1', 'SPO11', 'STAT5A', 'STK11', 'STRA13', 'SUV39H1', 'SYCP3', 'TBCE', 'TDP1', 'TERT', 'TEX15', 'TMPRSS2', 'TNS1', 'TOP1', 'TOP2A', 'TOP3A', 'TOP3B', 'TOPBP1', 'TOX3', 'TP53BP1', 'TP53', 'TPX2', 'TRIP12', 'PRSS58', 'TTK', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2D1', 'UBE2E2', 'UBE2E3', 'UBE2N', 'UBE2T', 'UIMC1', 'USF1', 'USP11', 'USP15', 'USP1', 'USP21', 'USP4', 'UVRAG', 'VEGFA', 'VWF', 'WDR48', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WTIP', 'XPA', 'XPO1', 'XRCC1', 'XRCC2', 'XRCC3', 'XRCC4', 'XRCC5', 'XRCC6', 'ZFYVE26', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.8240679147120222 Spearman Correlation: 0.7947389600724982 Coefficient of Determination: 0.6790879280578208 RMSE: 0.11356343490033394 NRMSE: 0.0731605314223443 MAPE: 297.7444571817979 Pearson Correlation: -0.14048628212506567 Spearman Correlation: -0.05916532625095077 Coefficient of Determination: -9.14095703206284 RMSE: 0.5289036478890087 NRMSE: 0.6916937787079169 MAPE: 589.8526398955951 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: RandomForests Pearson Correlation: 0.5967051634387273 Spearman Correlation: 0.5202651014399465 Coefficient of Determination: 0.20324158471494347 RMSE: 0.1789405724108568 NRMSE: 0.11527819127773027 MAPE: 157.09843984941992 Pearson Correlation: 0.27878727461735503 Spearman Correlation: 0.2302846668911084 Coefficient of Determination: -0.0012394713016894432 RMSE: 0.1661904532246455 NRMSE: 0.21734185996814948 MAPE: 162.93063913830878 Protein: CDKN2A Protein Interaction Partners Count: 612 x_train_column_count: 605 x_train columns: ['ABCC1', 'ABL1', 'ACAP1', 'ACAP2', 'ACP5', 'ACTA1', 'ACTB', 'ACTG1', 'ADAMTS9', 'ADAP1', 'AFP', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD12', 'ANXA5', 'AP3D1', 'AP3S1', 'AP3S2', 'APAF1', 'APBA1', 'APBA2', 'ARAP1', 'ARAP2', 'ARF1', 'ARF3', 'ARF4', 'ARF5', 'ARF6', 'ARFGAP1', 'ARFGAP3', 'ARFIP2', 'ARFRP1', 'ARID1A', 'ARID2', 'ARID5B', 'ARL10', 'ARL1', 'ARL2', 'ARL3', 'ARL4A', 'ARL5A', 'AR', 'ASAP1', 'ATM', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'AXIN1', 'BAP1', 'BCL2L11', 'BCL2L1', 'BCL6', 'BECN1', 'BIRC5', 'BMI1', 'BRAF', 'BRCA1', 'BRCA2', 'BUB1B', 'RGCC', 'C1QBP', 'RABL6', 'CACNA1G', 'CADM1', 'CAMK1D', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNL1', 'CD274', 'CD34', 'CD44', 'CDC123', 'CDC20', 'CDC25A', 'CDC25C', 'CDC42', 'CDC45', 'CDC5L', 'CDC6', 'CDC7', 'CDH13', 'CDH17', 'CDH1', 'CDH2', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5RAP3', 'CDK6', 'CDK7', 'CDKAL1', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDX2', 'CEACAM5', 'CEBPB', 'CEBPE', 'CHEK1', 'CHEK2', 'CHFR', 'CHKA', 'COMMD1', 'CRABP1', 'CREBBP', 'CSF1R', 'CSF1', 'CSF2', 'CTBP1', 'CTBP2', 'CTCF', 'CTLA4', 'CTNNB1', 'CTSK', 'CUL1', 'CUL3', 'CXCR4', 'CYCS', 'CYLD', 'CYTH1', 'CYTH2', 'CYTH3', 'DAB2IP', 'DAP', 'DAXX', 'DICER1', 'DIRAS3', 'DLEC1', 'DMTF1', 'DNAH3', 'DNMT1', 'DNMT3A', 'DNMT3B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EBF1', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EP300', 'EPCAM', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ETS1', 'ETV6', 'EWSR1', 'EZH1', 'EZH2', 'FAT1', 'FBXW7', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FKBP2', 'FLT3', 'FMN2', 'FN1', 'FOS', 'FOXA1', 'FOXM1', 'FOXN2', 'FOXO1', 'FOXO3', 'FTO', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GATA4', 'GATA5', 'GBF1', 'GDF15', 'GGA1', 'GGA2', 'GGA3', 'GIT1', 'GIT2', 'GLI1', 'GLTSCR2', 'GMNN', 'GNA11', 'GNAQ', 'GNAS', 'GNL3', 'GOLPH3', 'GP5', 'GSPT1', 'GSTP1', 'H2AFX', 'H2AFZ', 'H3F3A', 'H3F3B', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC9', 'HELLS', 'HGF', 'HHEX', 'HIC1', 'HIF1A', 'HIST1H2BA', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AA3', 'HIST2H2AC', 'HIST2H4A', 'HIST4H4', 'HLTF', 'HMGA2', 'HNF4A', 'HNRNPD', 'HOPX', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA4', 'HSPA9', 'HUWE1', 'ID1', 'IDH1', 'IDH2', 'IGF1R', 'IGF1', 'IGF2BP2', 'IGF2R', 'IGF2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING4', 'INS', 'IQSEC1', 'IRS1', 'ISOC2', 'ITGAM', 'JAK1', 'JAK2', 'JAK3', 'JAZF1', 'JUNB', 'JUN', 'KAT2B', 'KAT5', 'KCNJ11', 'KCNQ1', 'KDM1A', 'KDM2B', 'KDM6A', 'KDM6B', 'KDR', 'KEAP1', 'KIAA1549', 'KIT', 'KLF4', 'KRAS', 'KRT19', 'KRT20', 'KRT5', 'KRT7', 'LATS2', 'LOX', 'LRRK2', 'MACROD2', 'MAF', 'MAP2K1', 'MAP2K4', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MAX', 'MC1R', 'MCL1', 'MCM10', 'MCM2', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEN1', 'MEOX1', 'MEOX2', 'MET', 'MGMT', 'MITF', 'MKRN1', 'MLANA', 'MLH1', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT3', 'MME', 'MMP2', 'MMP7', 'MMP9', 'MOV10', 'MRAS', 'MSH2', 'MSH6', 'MTA1', 'MTAP', 'MTHFR', 'MTNR1B', 'MTOR', 'MUC1', 'MYBL2', 'MYCL', 'MYCN', 'MYC', 'MYOD1', 'KAT6A', 'NANOG', 'NCAM1', 'NCL', 'NCOR1', 'NES', 'NEUROG1', 'NF1', 'NF2', 'NFATC1', 'NFE2L2', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NPM1', 'NRAS', 'NSUN2', 'ORC4', 'ORC5', 'OSBP2', 'P2RY8', 'PA2G4', 'PALB2', 'PARP1', 'PAX3', 'PAX5', 'PAX8', 'PBRM1', 'PCGF2', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PEX19', 'PGR', 'PHLDB1', 'PI3', 'PIAS2', 'PIGF', 'PIK3CA', 'PIK3R1', 'PIP4K2A', 'PLEKHA3', 'PLEKHA8', 'PLEK', 'PLK1', 'PMAIP1', 'PML', 'PMS2', 'POTEF', 'POU5F1', 'PPARA', 'PPARG', 'PPM1D', 'PPP1R9B', 'PPP3CA', 'PRDM2', 'PRMT6', 'PROM1', 'PRSS1', 'PSMC3', 'PSMD10', 'PSME3', 'PTCH1', 'PTEN', 'PTER', 'PTF1A', 'PTGS2', 'PTPN11', 'PTPRC', 'PTPRD', 'PXN', 'RAB11A', 'RAB5A', 'RABEP1', 'RABGEF1', 'RAC2', 'RAD51', 'RAF1', 'RAP2B', 'RARB', 'RASSF1', 'RASSF2', 'RB1', 'RBL1', 'RBL2', 'RCC1', 'RELA', 'RELB', 'REL', 'RET', 'RHOA', 'DROSHA', 'RNF2', 'RNF43', 'ROS1', 'RPL11', 'RPRM', 'RPS27A', 'RPS6KB1', 'RRAS2', 'RRAS', 'RTEL1', 'RUNX2', 'RUNX3', 'SDHC', 'SENP1', 'SENP3', 'SERPINE1', 'SERTAD1', 'SETD2', 'SFN', 'SFRP1', 'SFRP2', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SIX2', 'SKP2', 'SLC30A8', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SNAI1', 'SNAI2', 'SNCA', 'SOCS1', 'SOX2', 'SP1', 'SPEN', 'SRC', 'STAT1', 'STAT3', 'STK11', 'STK25', 'STK33', 'STMN1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUV39H1', 'SUZ12', 'SYNE1', 'SYP', 'TBL1XR1', 'TBRG1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TERT', 'TET2', 'TFDP1', 'TFPI2', 'TGFBR2', 'THADA', 'THBS1', 'TIMP3', 'TMCO1', 'TMEM115', 'TNFRSF10B', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TRADD', 'TRIM28', 'TRIP12', 'PRSS58', 'TSC2', 'TSPAN8', 'TTF1', 'TWIST1', 'TWSG1', 'TYR', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2I', 'UBE3A', 'UCHL1', 'USP7', 'UTF1', 'VEGFA', 'VHL', 'WDTC1', 'WEE1', 'WFS1', 'WHSC1', 'WIF1', 'WRN', 'WT1', 'WWOX', 'XRCC1', 'YY1', 'ZBTB17', 'ZBTB7A', 'ZEB1', 'ZFP91', 'ZNF148', 'ZNF217', 'ZNF227', 'ZNF410', 'ZNF420', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 5.538962509431192e-15 NRMSE: 1.4104460058137536e-15 MAPE: 7.437233019257467e-12 Pearson Correlation: 0.15524716999912996 Spearman Correlation: 0.19135650070449756 Coefficient of Determination: -10.631710747587457 RMSE: 2.0666085093792166 NRMSE: 0.520019252001514 MAPE: 1522.9255105474804 Predictor: ElasticNet Pearson Correlation: 0.530779699302998 Spearman Correlation: 0.3594062031744678 Coefficient of Determination: 0.18399510843963607 RMSE: 0.613982003974471 NRMSE: 0.15634488655100992 MAPE: 217.04975350074963 Pearson Correlation: 0.3177000908597789 Spearman Correlation: 0.26692851531814615 Coefficient of Determination: 0.0940419439130834 RMSE: 0.5767537965663467 NRMSE: 0.14512815393833742 MAPE: 243.3147393594794 Predictor: RandomForests Pearson Correlation: 0.7129606556304533 Spearman Correlation: 0.634889099049554 Coefficient of Determination: 0.5031252242250144 RMSE: 0.4791072424451144 NRMSE: 0.12200026544908824 MAPE: 183.28052453077407 Pearson Correlation: 0.37242994363311455 Spearman Correlation: 0.36588353809698415 Coefficient of Determination: -0.05028040350463403 RMSE: 0.6209963500124829 NRMSE: 0.15626087667962127 MAPE: 454.1511108229819 Protein: TP53 Protein Interaction Partners Count: 1000 x_train_column_count: 991 x_train columns: ['ABCB1', 'ABCC1', 'ABL1', 'ACTB', 'ACTL6A', 'ADAM17', 'AFP', 'AGT', 'AICDA', 'AIFM2', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD2', 'ANXA1', 'ANXA2', 'ANXA5', 'APAF1', 'APBB1', 'APC', 'APEX1', 'APOBEC3B', 'APP', 'ARID1A', 'ARID3A', 'AR', 'ASF1A', 'ASXL1', 'ATF2', 'ATF3', 'ATG7', 'ATM', 'ATN1', 'ATRIP', 'ATRX', 'ATR', 'ATXN3', 'AURKA', 'AURKB', 'AXIN1', 'AXL', 'BACE1', 'BAG1', 'BAG2', 'BAIAP2L1', 'BAK1', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2A1', 'BCL2L11', 'BCL2L12', 'BCL2L14', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BID', 'BIRC3', 'BIRC5', 'BIRC6', 'BLM', 'BMF', 'BMI1', 'BMX', 'BNIP3L', 'BNIP3', 'BRCA1', 'BRCA2', 'BRCC3', 'BRD1', 'BRD4', 'BRD7', 'BRE', 'BRIP1', 'BRPF1', 'BRPF3', 'BTG2', 'BTK', 'BUB1B', 'BUB1', 'RHNO1', 'RGCC', 'RMI2', 'CNOT11', 'SETD9', 'CA9', 'CABIN1', 'CABLES1', 'CAPN1', 'CARM1', 'CASP10', 'CASP1', 'CASP2', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBX2', 'CBX4', 'CBX6', 'CBX8', 'CCDC106', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNG2', 'CCNH', 'CCNK', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CD24', 'CD274', 'CD34', 'CD40LG', 'CD40', 'CD44', 'CD82', 'CDC20', 'CDC25A', 'CDC25C', 'CDH17', 'CDH1', 'CDK12', 'CDK13', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CEACAM5', 'CEBPB', 'CENPJ', 'CFL1', 'CFLAR', 'CHD3', 'CHD4', 'CHD8', 'CHEK1', 'CHEK2', 'CHUK', 'CISH', 'CITED2', 'CLSPN', 'CLU', 'CNOT10', 'CNOT1', 'CNOT2', 'CNOT3', 'CNOT4', 'CNOT6L', 'CNOT6', 'CNOT7', 'CNOT8', 'COPS5', 'CREB1', 'CREBBP', 'CRYAB', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK1G1', 'CSNK1G2', 'CSNK1G3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTCF', 'CTGF', 'CTNNB1', 'CUL4A', 'CUL7', 'CUL9', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP1A1', 'DACH1', 'DAPK1', 'DAP', 'DAXX', 'DDB1', 'DDB2', 'DDIT4', 'DDX17', 'DDX3X', 'DDX5', 'DECR1', 'DGCR8', 'DHCR24', 'DHFR', 'DIABLO', 'DICER1', 'DKK1', 'DMTF1', 'DNA2', 'DNAJA3', 'DNAJB1', 'DNMT1', 'DNMT3A', 'DNTT', 'DPYD', 'DRAM1', 'DTL', 'DUSP1', 'DUSP2', 'DYRK1A', 'DYRK2', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EEF1A1', 'EEF1A2', 'EGFR', 'EGF', 'EGR1', 'EHMT1', 'EHMT2', 'EI24', 'EIF2AK2', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4EBP1', 'ELANE', 'ELAVL1', 'ELL3', 'ELL', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHA3', 'EPHB2', 'ERBB2', 'ERBB4', 'ERCC1', 'ERCC2', 'ERCC3', 'ERCC6', 'ESR1', 'ETS1', 'ETS2', 'EWSR1', 'EXO1', 'EZH2', 'F2', 'FADD', 'AMER1', 'FAM175B', 'FANCC', 'FANCD2', 'FASLG', 'FAS', 'FBL', 'FBXO11', 'FBXO4', 'FBXW7', 'FGF1', 'FGF2', 'FGFR3', 'FHIT', 'FHL2', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FSCN1', 'FUT4', 'FZR1', 'G3BP1', 'G6PD', 'GADD45A', 'GADD45B', 'GADD45G', 'GAPDH', 'GATAD2A', 'GATAD2B', 'GDF15', 'GFI1', 'GLS2', 'GLTSCR2', 'GNL3', 'GRAMD4', 'GRB10', 'GRB14', 'GSK3B', 'GSTP1', 'GTF2H1', 'GTSE1', 'H1F0', 'H2AFX', 'HAMP', 'HCK', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC5', 'HDAC7', 'HDAC8', 'HDAC9', 'HERC5', 'HIC1', 'HIF1A', 'HIPK1', 'HIPK2', 'HIPK3', 'HIPK4', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HK2', 'HMGA1', 'HMGA2', 'HMGB1', 'HMGB2', 'HMMR', 'HMOX1', 'HNF4A', 'HNRNPK', 'HNRNPL', 'HOXA5', 'HPGDS', 'HRAS', 'HSF1', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA1A', 'HSPA1B', 'HSPA1L', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'HSPB1', 'HSPB2', 'HTT', 'HUS1', 'HUWE1', 'ICAM1', 'ID2', 'ID4', 'IDH1', 'IDH2', 'IFI16', 'IFNAR1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IGFBP7', 'IKBKB', 'IL17A', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING2', 'ING3', 'ING4', 'ING5', 'INSIG1', 'INS', 'IRF1', 'ISG15', 'ITPKB', 'JAG1', 'JAK2', 'JMY', 'JUN', 'KAT2A', 'KAT2B', 'KAT5', 'KDM1A', 'KDM6A', 'KDM6B', 'KDR', 'KHDRBS1', 'CCAR2', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KPNA2', 'KRAS', 'KRT14', 'KRT17', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'L3MBTL1', 'LAMA4', 'LEP', 'LGALS7B', 'LGALS7', 'LIF', 'LIG4', 'LIN28A', 'PIDD1', 'LRRK2', 'LYN', 'MAF1', 'MAF', 'MAGEA2', 'MAP1LC3B', 'MAP2K1', 'MAP2K3', 'MAP2K7', 'MAP3K1', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MBD3', 'MCL1', 'MCM7', 'MDC1', 'MDH1', 'MDM2', 'MDM4', 'MEAF6', 'MECOM', 'MELK', 'MET', 'MGMT', 'MIF', 'MKI67', 'MKRN1', 'MLH1', 'KMT2D', 'KMT2C', 'MMP13', 'MMP1', 'MMP2', 'MMP9', 'MOV10', 'MRE11A', 'MSH2', 'MSH6', 'MSX1', 'MT1A', 'MT2A', 'MTA1', 'MTA2', 'MTA3', 'MTOR', 'MUC1', 'MUTYH', 'MYBBP1A', 'MYB', 'MYCN', 'MYC', 'MYOCD', 'KAT8', 'KAT6A', 'NANOG', 'NBN', 'NCL', 'NCOA3', 'NCOR1', 'NCOR2', 'NDN', 'NDRG1', 'NEDD8', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFE2L2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NFKBIB', 'NFYA', 'NFYB', 'NFYC', 'NGFR', 'NKX2-1', 'NLK', 'NLRC4', 'NME1', 'NOC2L', 'NOS3', 'NOTCH1', 'NOTCH3', 'NOTCH4', 'NOX4', 'NPM1', 'NQO1', 'NR1I2', 'NR2E1', 'NR3C1', 'NR4A1', 'NR4A2', 'NRAS', 'NUAK1', 'NUMB', 'NUPR1', 'OGG1', 'OLIG2', 'OPN1SW', 'OSGIN1', 'OTUB1', 'OTUB2', 'OTUD5', 'PADI4', 'PALB2', 'PARK2', 'PARK7', 'PARP1', 'PATZ1', 'PAX2', 'PAX3', 'PAX8', 'PBK', 'PBRM1', 'PCBP4', 'PCNA', 'PDCD4', 'PDCD5', 'PDGFRA', 'PDGFRB', 'PDLIM7', 'PER2', 'PERP', 'PGR', 'PHB', 'PHC1', 'PHC2', 'PHC3', 'PHF20', 'PHGDH', 'PI3', 'PIAS1', 'PIAS2', 'PIAS4', 'PIK3CA', 'PIN1', 'PKM', 'PLAGL1', 'PLAU', 'PLK1', 'PLK2', 'PLK3', 'PLK4', 'PMAIP1', 'PML', 'PMS2', 'POLI', 'POLK', 'POU4F1', 'POU4F2', 'POU5F1', 'PPARGC1A', 'PPARG', 'PPIF', 'PPM1D', 'PPP1R13B', 'PPP1R13L', 'PPP1R15A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R4', 'PPP2R5C', 'PRDM1', 'PRDM2', 'PRDX1', 'PRELID1', 'PRIMA1', 'PRKAA1', 'PRKAA2', 'PRKAB1', 'PRKAB2', 'PRKAG1', 'PRKAG2', 'PRKAG3', 'PRKCA', 'PRKCD', 'PRKCZ', 'PRKD1', 'PRKDC', 'PRKG1', 'PRMT1', 'PRMT5', 'PROM1', 'PSEN1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTBP1', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2', 'PTTG1', 'RABGGTA', 'RABGGTB', 'RAD17', 'RAD1', 'RAD50', 'RAD51', 'RAD9A', 'RAD9B', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP4', 'RBBP6', 'RBBP7', 'RBBP8', 'RBL1', 'RBL2', 'RBM38', 'RBPJ', 'RCHY1', 'RCOR1', 'RECQL4', 'RELA', 'REM1', 'REST', 'RET', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RFFL', 'RFWD2', 'RING1', 'RMI1', 'DROSHA', 'RNF20', 'RNF2', 'RNF34', 'RNF43', 'ROCK1', 'RPA1', 'RPA2', 'RPA3', 'RPL11', 'RPL22', 'RPL26', 'RPL5', 'RPRM', 'RPS14', 'RPS19', 'RPS27A', 'RPS27L', 'RPS3', 'RPS6KB1', 'RQCD1', 'RRAD', 'RRM2B', 'RRM2', 'RUNX2', 'RUNX3', 'S100A2', 'S100A4', 'S100A6', 'S100B', 'SALL4', 'SCO2', 'SDHC', 'SENP1', 'SENP3', 'SERPINB5', 'SERPINE1', 'SESN1', 'SESN2', 'SESN3', 'SETD2', 'SETD7', 'SETD8', 'SETDB1', 'SFN', 'SRSF1', 'SGK1', 'SHFM1', 'SHH', 'SHISA5', 'SIK1', 'SIN3A', 'SIN3B', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SKP2', 'SLC2A14', 'SLC2A1', 'SLC2A2', 'SLC2A3', 'SLC6A6', 'SLMO1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMG1', 'SMG7', 'SMYD2', 'SNAI1', 'SNAI2', 'SOCS1', 'SOCS3', 'SOD2', 'SORT1', 'SOX2', 'SOX4', 'SP100', 'SP1', 'SP3', 'SP7', 'SPATA18', 'SPP1', 'SQSTM1', 'SRC', 'SREBF1', 'SREBF2', 'SSRP1', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STEAP3', 'STK11', 'STMN1', 'STUB1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUMO4', 'SUPT16H', 'SUV39H1', 'SUZ12', 'SYK', 'SYP', 'TADA3', 'TAF10', 'TAF11', 'TAF12', 'TAF13', 'TAF15', 'TAF1L', 'TAF1', 'TAF2', 'TAF3', 'TAF4B', 'TAF4', 'TAF5', 'TAF6', 'TAF7L', 'TAF7', 'TAF9B', 'TBPL1', 'TBPL2', 'TBP', 'TCHP', 'TCP1', 'TDG', 'TERT', 'TET2', 'TFAM', 'TFAP2A', 'TFAP2C', 'TFDP1', 'TFF1', 'TGFB1', 'TGM2', 'THBS1', 'TIMP3', 'TLR3', 'TLR9', 'TMEM219', 'TNFAIP3', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF10C', 'TNFRSF10D', 'TNF', 'TNK2', 'TNKS1BP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOE1', 'TOP1', 'TOP2A', 'TOP3A', 'TOPBP1', 'TOPORS', 'TP53AIP1', 'TP53BP1', 'TP53BP2', 'TP53I3', 'TP53INP1', 'TP53RK', 'TP63', 'TP73', 'TPT1', 'TPX2', 'TRAF6', 'TRIAP1', 'TRIM24', 'TRIM28', 'TRIM29', 'TRIM32', 'TRIM59', 'TRIM8', 'TRRAP', 'TSC2', 'TTC5', 'TTK', 'TWIST1', 'TWIST2', 'TXN', 'TYMS', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2D1', 'UBE2E1', 'UBE2I', 'UBE2K', 'UBE2N', 'UBE2Q1', 'UBE2S', 'UBE3A', 'UBN1', 'UCHL1', 'UHRF1', 'USF1', 'USP10', 'USP15', 'USP24', 'USP3', 'USP42', 'USP7', 'UTP14A', 'VEGFA', 'VHL', 'VPRBP', 'VRK1', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WWOX', 'XAF1', 'XIAP', 'XPA', 'XPO1', 'XRCC1', 'XRCC5', 'XRCC6', 'YBX1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'YY1', 'YY2', 'ZBTB33', 'ZBTB7A', 'ZEB1', 'ZEB2', 'ZKSCAN4', 'ZNF148', 'ZNF274', 'ZNF385A', 'ZNF420', 'ZNF668', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.819584532990298e-15 NRMSE: 4.627748755030132e-16 MAPE: 6.633778788920633e-12 Pearson Correlation: 0.3097835846818702 Spearman Correlation: 0.3122856893477475 Coefficient of Determination: -0.9775746696773848 RMSE: 0.742711704460337 NRMSE: 0.19893175424141876 MAPE: 705.265531266202 Predictor: ElasticNet Pearson Correlation: 0.4505650864948438 Spearman Correlation: 0.4359486539503569 Coefficient of Determination: 0.15942022686825552 RMSE: 0.3885466594219426 NRMSE: 0.09881905934076213 MAPE: 659.3948788005476 Pearson Correlation: 0.44907197422939815 Spearman Correlation: 0.4052943303532463 Coefficient of Determination: 0.13286469949703505 RMSE: 0.4918098877873273 NRMSE: 0.1317289106166673 MAPE: 162.21573455895532 Predictor: RandomForests Pearson Correlation: 0.6473419135768366 Spearman Correlation: 0.5829555053484536 Coefficient of Determination: 0.3686496893514176 RMSE: 0.3367355055168576 NRMSE: 0.08564193024157726 MAPE: 809.5838682394865 Pearson Correlation: 0.5088654518041784 Spearman Correlation: 0.44548435766032 Coefficient of Determination: 0.2238460603250575 RMSE: 0.4652943252108043 NRMSE: 0.12462684484017794 MAPE: 142.51385308320772 Protein: CTNNB1 Protein Interaction Partners Count: 992 x_train_column_count: 984 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACAN', 'ACP1', 'ACTA1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTN4', 'ACVR1B', 'ACVR1', 'ADAM10', 'ADCY7', 'ADIPOQ', 'AES', 'AFP', 'AHI1', 'AHR', 'AHSA1', 'AJAP1', 'AK9', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'ALPL', 'AMHR2', 'AMH', 'ANXA5', 'AP1M1', 'APC2', 'APCS', 'APC', 'APH1A', 'APH1B', 'AQP1', 'ARHGAP10', 'ARHGAP21', 'ARHGAP32', 'ARHGEF4', 'ARID1A', 'ARID2', 'ARMC7', 'ARMC8', 'ARVCF', 'ARX', 'AR', 'ASCL1', 'ASF1A', 'ASH2L', 'ASIP', 'ATF4', 'ATM', 'AURKA', 'AXIN1', 'AXIN2', 'BAG3', 'BCAR1', 'BCL2L1', 'BCL3', 'BCL6', 'BCL9L', 'BCL9', 'BDNF', 'BGLAP', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BMPR1B', 'BNIP2', 'BRAF', 'BRCA1', 'BRCA2', 'BRMS1L', 'BTRC', 'HILPDA', 'AK8', 'CA2', 'CA9', 'CABLES1', 'CACYBP', 'CALM1', 'CALM3', 'CARM1', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBLL1', 'CBL', 'CBY1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CD24', 'CD34', 'CD40', 'CD44', 'CDC27', 'CDC42', 'CDC73', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH16', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH26', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDHR5', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK8', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDON', 'CDX1', 'CDX2', 'CEBPA', 'CHD8', 'CHRD', 'CHUK', 'CITED1', 'CKAP5', 'CLCA1', 'CLDN3', 'CLDN5', 'COL1A1', 'COPS3', 'COPS5', 'COPS6', 'CREB1', 'CREBBP', 'CRKL', 'CRK', 'CRP', 'CRYAB', 'CSNK1A1L', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK2A3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNAL1', 'CTNNBIP1', 'CTNND1', 'CTNND2', 'CTTN', 'CUL1', 'CUL4A', 'CUL4B', 'CXCR4', 'CXXC4', 'DAB2', 'DACT1', 'DACT2', 'DACT3', 'DCT', 'DCX', 'DDB1', 'DDX39A', 'DDX3X', 'DDX5', 'DHODH', 'DHX9', 'DKK1', 'DKK2', 'DKK3', 'DKK4', 'DLG1', 'DLG2', 'DLG4', 'DLG5', 'DLGAP1', 'DLL4', 'DLX1', 'DNM2', 'DNMT1', 'DPYD', 'DSC1', 'DSC2', 'DSC3', 'DSG1', 'DSG2', 'DSG3', 'DSG4', 'DSP', 'DUSP6', 'DVL1', 'DVL2', 'DVL3', 'E2F3', 'ECM1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'ELAVL1', 'EMD', 'ENAH', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHB2', 'EPHB3', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EXOC3', 'EXOC4', 'EYA4', 'EZH2', 'EZR', 'F2RL2', 'FAF1', 'AMER1', 'FANCA', 'FASLG', 'FAS', 'FAT1', 'FAT4', 'FBXW11', 'FBXW7', 'FERMT2', 'FER', 'FGF10', 'FGF13', 'FGF2', 'FGF3', 'FGF4', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FLT3', 'FMN1', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC2', 'FOXG1', 'FOXL1', 'FOXL2', 'FOXM1', 'FOXN3', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FRAT1', 'FRAT2', 'FRZB', 'FSCN1', 'FSTL1', 'FSTL3', 'FURIN', 'FUS', 'FXR1', 'FYN', 'FZD10', 'FZD1', 'FZD2', 'FZD3', 'FZD4', 'FZD5', 'FZD6', 'FZD7', 'FZD8', 'FZD9', 'GAPDH', 'GATA2', 'GATA4', 'GCG', 'GDF2', 'GDNF', 'GFRA1', 'GJA1', 'GLI1', 'GLI2', 'GLI3', 'GLIS2', 'GLUL', 'GNA11', 'GNA12', 'GNA13', 'GNAQ', 'GNAS', 'GPC3', 'GRIA2', 'GRIP1', 'GSK3A', 'GSK3B', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HAS2', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC7', 'HERC5', 'HES7', 'HGF', 'HGS', 'HHEX', 'HIC1', 'HIF1A', 'HINT1', 'HIPK2', 'HIST1H1C', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HMGB1', 'HNF1A', 'HNF4A', 'HNRNPA1', 'HNRNPA2B1', 'HNRNPK', 'HNRNPM', 'HOXA10', 'HOXB4', 'HPGD', 'HRAS', 'HSP90AB1', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPD1', 'HTRA1', 'HTT', 'HUWE1', 'IBSP', 'IDH1', 'IDH2', 'IFNB1', 'IFRD1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP4', 'IHH', 'IKBKB', 'IL6', 'CXCL8', 'ILK', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IRF3', 'ISG15', 'ISL1', 'ITGAE', 'ITGB1', 'ITGB7', 'ITK', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'AJUBA', 'JUN', 'JUP', 'KANK1', 'KAT2A', 'KAT2B', 'KAT5', 'KCNN1', 'KCTD1', 'KDM1A', 'KDR', 'KIF18B', 'KIF3A', 'KIF5B', 'KIFC3', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KRAS', 'KREMEN1', 'KRIT1', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LATS2', 'LDB1', 'LDHB', 'LDLR', 'LEF1', 'LEO1', 'LGR4', 'LGR5', 'LGR6', 'LHCGR', 'LHX8', 'LIF', 'LIMA1', 'LMNA', 'LMNB1', 'LOX', 'LRP4', 'LRP5L', 'LRP5', 'LRP6', 'LRRFIP1', 'LRRK2', 'LZTFL1', 'MACF1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8IP1', 'MAPK8', 'MAPK9', 'MDFIC', 'MDFI', 'MDK', 'MDM2', 'MED12', 'MED1', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'KMT2D', 'MLLT10', 'MLLT11', 'MLLT4', 'MLLT6', 'KMT2A', 'MME', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP25', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MRAP', 'MSH2', 'MSH6', 'MSN', 'MSX1', 'MSX2', 'MTDH', 'MTOR', 'MUC13', 'MUC1', 'MUTYH', 'MYCN', 'MYC', 'MYF5', 'MYO1D', 'MYO6', 'MYO7A', 'MYOD1', 'MYOG', 'NANOG', 'NCAM1', 'NCCRP1', 'NCOA2', 'NCSTN', 'NDP', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEURL2', 'NF1', 'NF2', 'NFAT5', 'NFKB1', 'NIT1', 'NKD1', 'NKX2-5', 'NLK', 'NME1', 'NOG', 'NONO', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR0B1', 'NR4A1', 'NR4A2', 'NR5A1', 'NR5A2', 'NRAS', 'NRIP1', 'NTRK1', 'NTRK2', 'NTRK3', 'NUDT5', 'NUMB', 'NUP153', 'NUTF2', 'OTX2', 'PAK1', 'PAK2', 'PAK3', 'PANK4', 'PARD3', 'PARD6A', 'PARK2', 'PARP1', 'PAX3', 'PAX6', 'PAX7', 'PAX8', 'PDGFRA', 'PDGFRB', 'PECAM1', 'PGK1', 'PGR', 'PHB', 'JADE1', 'PI3', 'PICK1', 'PIK3CA', 'PIK3R1', 'PIK3R2', 'PIN1', 'PIP5K1A', 'PIP5K1C', 'PITX2', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAG1', 'PLEKHA7', 'PLK1', 'PML', 'PMS2', 'POLE', 'PORCN', 'POTEF', 'POU5F1', 'PPARD', 'PPARG', 'PPM1A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R2B', 'PPP2R5A', 'PPP2R5B', 'PPP2R5C', 'PPP2R5D', 'PPP2R5E', 'PRKACA', 'PRKACB', 'PRKACG', 'PRKAR1A', 'PRKCA', 'PRKCG', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRL', 'PRMT1', 'PROC', 'PROM1', 'PROP1', 'PSEN1', 'PSEN2', 'PSENEN', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTEN', 'PTGES3', 'PTGS2', 'PTH1R', 'PTH', 'PTK2', 'PTK7', 'PTMA', 'PTN', 'PTPN11', 'PTPN13', 'PTPN1', 'PTPN6', 'PTPRB', 'PTPRC', 'PTPRF', 'PTPRG', 'PTPRJ', 'PTPRK', 'PTPRM', 'PTPRU', 'PTPRZ1', 'PVRL1', 'PVRL2', 'PXN', 'PYGO1', 'PYGO2', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RALGDS', 'RANBP3', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RAPGEF2', 'RAPGEF6', 'RAPSN', 'RARA', 'RARB', 'RARG', 'RARS', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP5', 'RBMX', 'RBPJ', 'RBX1', 'RELA', 'REM1', 'RET', 'RHOA', 'RIPK2', 'RNF220', 'RNF43', 'ROBO1', 'ROCK1', 'ROCK2', 'ROR2', 'RPRD1A', 'RPS27A', 'RPSA', 'RSPO1', 'RSPO2', 'RSPO3', 'RSPO4', 'RUNX2', 'RUNX3', 'RUVBL1', 'RUVBL2', 'RXRA', 'RYK', 'S100A4', 'S100A6', 'SALL1', 'SALL4', 'SATB1', 'SCRIB', 'SDHC', 'SERPINE1', 'SETD2', 'SETD7', 'SFN', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHFM1', 'SHH', 'SIAH1', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT6', 'SKP1', 'SLC6A3', 'SLC9A3R1', 'SLCO1B3', 'SLCO2A1', 'SLIT1', 'SLK', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD5', 'SMAD7', 'SMAD9', 'SMARCA2', 'SMARCA4', 'SMARCA5', 'SMARCB1', 'SMO', 'SMURF1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNX1', 'SOST', 'SOX10', 'SOX13', 'SOX17', 'SOX1', 'SOX2', 'SOX3', 'SOX4', 'SOX6', 'SOX7', 'SOX8', 'SOX9', 'SP1', 'SP7', 'SPAG9', 'SPATA13', 'SPEN', 'SPN', 'SPP1', 'SRC', 'STAT3', 'STK11', 'STRAP', 'STX4', 'SUFU', 'SUV39H1', 'SYP', 'TADA3', 'TAX1BP3', 'TAZ', 'TBL1XR1', 'TBL1X', 'TBX5', 'TBX6', 'TCF12', 'TCF3', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TFAP2A', 'TFCP2', 'TFF1', 'TFF2', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBR1', 'TGFBR2', 'TGM2', 'TJP1', 'TJP2', 'TLE1', 'TLE2', 'TLE3', 'TLE4', 'TNFRSF11B', 'TNFSF11', 'TNF', 'TNIK', 'TNKS2', 'TNKS', 'TNS1', 'TOB1', 'TOP2A', 'TP53', 'TRAF4', 'TRIM33', 'TRIM37', 'TRIP10', 'TRRAP', 'TSC2', 'TUBA1A', 'TWIST1', 'TYMS', 'T', 'UBA52', 'UBB', 'UBC', 'UBE2B', 'UBE2R2', 'UBE3A', 'UBR5', 'UCHL1', 'UMPS', 'UPRT', 'USP4', 'USP7', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VAV2', 'VAV3', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VHL', 'VIM', 'WDR64', 'WDTC1', 'WHSC1', 'WIF1', 'WISP1', 'WLS', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'WWTR1', 'XPO1', 'YAP1', 'YARS', 'YEATS4', 'YES1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'ZAP70', 'ZAR1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZIC3', 'ZNRF3', 'ZYX', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 4.630421184531007e-15 NRMSE: 9.107830811429991e-16 MAPE: 4.101841325617028e-12 Pearson Correlation: 0.16457673488063956 Spearman Correlation: 0.18002468858713952 Coefficient of Determination: -2.3700735853163457 RMSE: 1.2440278112987575 NRMSE: 0.398421661387193 MAPE: 550.6777115394266 Predictor: ElasticNet Pearson Correlation: 0.5131405824492989 Spearman Correlation: 0.48482969708674906 Coefficient of Determination: 0.14518383358813458 RMSE: 0.6989516362026208 NRMSE: 0.13748065228218348 MAPE: 768.2508712134631 Pearson Correlation: 0.5372447533985205 Spearman Correlation: 0.5125924263394805 Coefficient of Determination: 0.15587603308249198 RMSE: 0.6226063033317653 NRMSE: 0.19940055641087923 MAPE: 254.39994024616385 Predictor: RandomForests Pearson Correlation: 0.6583337231151551 Spearman Correlation: 0.6503205024777605 Coefficient of Determination: 0.41987365167168433 RMSE: 0.5758005266694284 NRMSE: 0.1132573813275823 MAPE: 477.1880977198457 Pearson Correlation: 0.6475541674127557 Spearman Correlation: 0.5680644397062308 Coefficient of Determination: 0.41490985198943364 RMSE: 0.518348433359178 NRMSE: 0.16601015035251138 MAPE: 188.74191841909266 Protein: CCNE1 Protein Interaction Partners Count: 350 x_train_column_count: 347 x_train columns: ['ABL1', 'AKT1', 'AKT2', 'AKT3', 'ALDH18A1', 'ANAPC10', 'ANAPC13', 'ANAPC1', 'ANAPC2', 'ANAPC4', 'ANAPC5', 'ANAPC7', 'ANXA5', 'ARID1A', 'AR', 'ATM', 'AURKA', 'AURKB', 'BARD1', 'BCL2L1', 'BIRC5', 'BRCA1', 'BRCA2', 'BTG2', 'BTRC', 'BUB1B', 'BUB1', 'BUB3', 'RGCC', 'MLIP', 'CABLES1', 'CALM1', 'CAPRIN1', 'CASP3', 'CASP9', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNF', 'CCNG1', 'CCNH', 'CCNK', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CDC16', 'CDC20', 'CDC23', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC26', 'CDC27', 'CDC45', 'CDC6', 'CDC7', 'CDCA2', 'CDCA5', 'CDCA8', 'CDH1', 'CDK12', 'CDK13', 'CDK14', 'CDK15', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CENPA', 'CENPE', 'CHAF1A', 'CHD1L', 'CHEK1', 'CHEK2', 'CINP', 'CKS1B', 'CKS2', 'COPS5', 'CREBBP', 'CSK', 'CTNNB1', 'CUL1', 'CUL3', 'CUL4B', 'DBF4B', 'DBF4', 'DGCR8', 'DICER1', 'DTL', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'EBNA1BP2', 'ECT2', 'EGFR', 'EGF', 'ELAVL1', 'ELSPBP1', 'EP400', 'ERBB2', 'ERBB3', 'ERBB4', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM58A', 'FAM83H', 'FBXO5', 'FBXW7', 'FEN1', 'FGFR1', 'FGFR2', 'FGFR3', 'FOXM1', 'FZR1', 'GAPDH', 'GLI1', 'GMNN', 'GSK3B', 'H1F0', 'HDAC1', 'HEATR3', 'HERC5', 'HIST1H1A', 'HIST1H1B', 'HIST1H4A', 'HRAS', 'IFNAR1', 'IGF1R', 'IGF1', 'ITPKB', 'JUN', 'KIF11', 'KIF20A', 'KIF23', 'KIF2C', 'KPNA2', 'KRAS', 'LATS2', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'GMNC', 'MAD2L1', 'MAPK3', 'MATK', 'MAX', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDM2', 'MEGF11', 'MELK', 'MKI67', 'KMT2D', 'KMT2B', 'MNAT1', 'MRE11A', 'MTOR', 'MYBL2', 'MYC', 'NBN', 'NF1', 'NFYB', 'NMI', 'NOTCH1', 'NOTCH3', 'NPAT', 'NRAS', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PARK2', 'PARP1', 'PCBP4', 'PCNA', 'PIK3CA', 'PIK3R1', 'PKMYT1', 'PLK1', 'PLK4', 'POLA1', 'POLD1', 'PPP1R1C', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R4', 'PRC1', 'PRKAR1A', 'PRKAR2A', 'PRMT5', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB10', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSMF1', 'PTEN', 'PTGDR', 'PTK6', 'PTTG1', 'RAD51', 'RAD54L', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RBX1', 'REL', 'REM1', 'RHOA', 'RHOBTB3', 'RINT1', 'RNASE1', 'RPRD1A', 'RPS27A', 'RRM1', 'RRM2', 'RRN3', 'RSF1', 'SHFM1', 'SKP1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'ST8SIA1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STK3', 'STK4', 'TARBP1', 'TCP1', 'TERF1', 'TERT', 'TFDP1', 'TK1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TPX2', 'TTK', 'TUBG1', 'TYMS', 'UBA52', 'UBB', 'UBC', 'UBE2C', 'UBE2QL1', 'UBE2S', 'UHRF2', 'WEE1', 'WEE2', 'XIAP', 'YAP1', 'ZNF217', 'ZNF33A', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.9598341887810986 Spearman Correlation: 0.8788919966826688 Coefficient of Determination: 0.9212816699530698 RMSE: 0.12591692181205155 NRMSE: 0.04485019476831756 MAPE: 24.72837237396705 Pearson Correlation: 0.6943581334274757 Spearman Correlation: 0.41095026122520234 Coefficient of Determination: 0.1354291782340633 RMSE: 0.6026146657078164 NRMSE: 0.1454291251074683 MAPE: 102.47606323835896 Predictor: ElasticNet Pearson Correlation: 0.6896420138179974 Spearman Correlation: 0.5756764396232202 Coefficient of Determination: 0.3834565414255422 RMSE: 0.3523935975316258 NRMSE: 0.1255186456034286 MAPE: 75.55507547144049 Pearson Correlation: 0.6253064834008984 Spearman Correlation: 0.659696504943952 Coefficient of Determination: 0.2482877601939335 RMSE: 0.5619080066323289 NRMSE: 0.13560537843770756 MAPE: 100.00363021211795 Predictor: RandomForests Pearson Correlation: 0.8628866187424806 Spearman Correlation: 0.7123646669252789 Coefficient of Determination: 0.7415758280964511 RMSE: 0.22814593168750602 NRMSE: 0.08126302108192555 MAPE: 54.405867253368335 Pearson Correlation: 0.7819079210289549 Spearman Correlation: 0.7309018274919328 Coefficient of Determination: 0.5784153717310645 RMSE: 0.4208058737411625 NRMSE: 0.10155317077519187 MAPE: 76.84316764285622 Protein: CCND1 Protein Interaction Partners Count: 857 x_train_column_count: 849 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTL6B', 'AFP', 'AHR', 'AKAP12', 'AKAP8', 'AKR1B10', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDOA', 'ALK', 'ANO1', 'ANXA5', 'APAF1', 'APC', 'APEX1', 'AREG', 'ARHGEF2', 'ARID1A', 'ARID1B', 'ARID2', 'ARID4A', 'AR', 'ASIP', 'ATF2', 'ATF3', 'ATF4', 'ATM', 'ATXN1', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'B2M', 'BANP', 'BARX2', 'BAX', 'BCAR1', 'BCAR3', 'BCCIP', 'BCL2A1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL3', 'BCL6', 'BCL9', 'BECN1', 'BGLAP', 'BHLHE40', 'BIRC2', 'BIRC3', 'BIRC5', 'BMI1', 'BMP4', 'BMP6', 'BRAF', 'BRCA1', 'BRCA2', 'BRD2', 'BRD4', 'BTC', 'BTG2', 'BTRC', 'RGCC', 'COPRS', 'CA9', 'CARD11', 'CARM1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBFB', 'CCDC62', 'CCL2', 'CCL5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNC', 'CCND2', 'CCND3', 'CCNDBP1', 'CCNE1', 'CCNE2', 'CCNG2', 'CCNH', 'CCNK', 'CCNL1', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CD19', 'CD22', 'CD24', 'CD34', 'CD38', 'CD44', 'CD5', 'CD79A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC6', 'CDC73', 'CDCA7L', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK12', 'CDK13', 'CDK14', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK20', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CDX2', 'CENPE', 'CEP57', 'CFLAR', 'CHEK1', 'CHEK2', 'CHKA', 'CHUK', 'CKS1B', 'CKS2', 'CLCN3', 'COL1A1', 'CR2', 'CREB1', 'CREBBP', 'CRKL', 'CRYAB', 'CSF2', 'CTBP1', 'CTGF', 'CTNNB1', 'CTNND1', 'CTTN', 'CUL1', 'CUL3', 'CUL7', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'CYR61', 'DACH1', 'DAXX', 'DDIT3', 'DDX53', 'DECR1', 'DHFR', 'DICER1', 'DKK1', 'DKK3', 'DLL1', 'DMTF1', 'DND1', 'DNMT1', 'DNMT3A', 'DNTT', 'DVL1', 'DVL2', 'DYRK1A', 'DYRK1B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EDN1', 'EEF1A1', 'EGFR', 'EGF', 'EGLN2', 'EGR1', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF3I', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4E', 'EIF4G1', 'ELAVL1', 'ELSPBP1', 'EP300', 'EPCAM', 'EPHA2', 'EPHA7', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EWSR1', 'EYA1', 'EZH2', 'FABP4', 'FADD', 'FAM58A', 'FAM83H', 'FASLG', 'FAT1', 'FBXO31', 'FBXO4', 'FBXW7', 'FBXW8', 'FGF13', 'FGF19', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FHL2', 'FIGF', 'FLCN', 'FLNA', 'FLT1', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXC1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FRZB', 'FSTL3', 'FZD1', 'FZD2', 'FZD7', 'FZD9', 'FZR1', 'GADD45A', 'GAL', 'GAPDH', 'GAST', 'GATA3', 'GATA4', 'GDF15', 'GDF2', 'GGNBP2', 'GGT1', 'GIT1', 'GJA1', 'GJB1', 'GLI1', 'GLI2', 'GLI3', 'GLTSCR2', 'GNB2L1', 'GPER1', 'GRB2', 'GREB1', 'GRM4', 'GRP', 'GSK3B', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HBEGF', 'HBZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC4', 'HEXIM1', 'HEY1', 'HGF', 'HIF1A', 'HIST1H2AA', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AH', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AC', 'HIST2H2BE', 'HIST2H4A', 'HIST4H4', 'HMGA2', 'HMOX1', 'HNF1A', 'HNF4A', 'HNRNPD', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB8', 'ICAM1', 'ID1', 'ID2', 'IFNAR1', 'IFNB1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP3', 'IGFBP5', 'IHH', 'IKBKB', 'IL10', 'IL17A', 'IL2', 'IL4', 'IL6', 'IL7', 'CXCL8', 'ILK', 'INSM1', 'INS', 'IRF1', 'IRS1', 'ISG15', 'ITGB1', 'ITPKB', 'ITPKC', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUNB', 'JUND', 'JUN', 'KAT2A', 'KAT2B', 'KDM1A', 'KDM5B', 'KDR', 'KHDRBS1', 'KIF18B', 'KIN', 'KITLG', 'KIT', 'KLF13', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KRAS', 'KRT10', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LDB3', 'LEF1', 'LEP', 'LGALS3', 'LGR5', 'LIMK2', 'LIMS1', 'LIN28B', 'LMNA', 'LMNB1', 'LOX', 'LRP5', 'LRP6', 'LYN', 'MAFB', 'MAF', 'MAML1', 'MAML2', 'MAML3', 'MAMLD1', 'MAP2K1', 'MAP2K2', 'MAP2K4', 'MAP2K7', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDK', 'MDM2', 'MDM4', 'MEN1', 'MET', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'MLXIPL', 'MME', 'MMP11', 'MMP14', 'MMP15', 'MMP1', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MNAT1', 'MOV10', 'MSH2', 'MST1', 'MTOR', 'MUC1', 'MYBL2', 'MYB', 'MYCN', 'MYC', 'MYEOV', 'MYF5', 'MYOD1', 'MYOG', 'NACA2', 'NADSYN1', 'NANOG', 'NCAM1', 'NCOA1', 'NCOA3', 'NCOR1', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NGF', 'NKX2-1', 'NME1-NME2', 'NME1', 'NME2', 'NMI', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NQO1', 'NR0B2', 'NR1H3', 'NR2E1', 'NR3C1', 'NR4A3', 'NRAS', 'NRF1', 'NUDT21', 'ODC1', 'ORAI1', 'ORAOV1', 'ORC4', 'PAK1', 'PAK4', 'PARK2', 'PARP1', 'PAX2', 'PAX5', 'PAX6', 'PBRM1', 'PBX3', 'PCNA', 'PDCD4', 'PDGFRA', 'PDGFRB', 'PDZK1', 'PECAM1', 'PELP1', 'PGR', 'PI3', 'PI4K2A', 'PIK3CA', 'PIK3R1', 'PKLR', 'PKM', 'PLAUR', 'PLAU', 'PLK1', 'PMAIP1', 'POLR2A', 'POTEF', 'POU2F1', 'POU5F1', 'PPARG', 'PPP2R4', 'PRDM5', 'PRKACA', 'PRL', 'PRMT5', 'PRNP', 'PROM1', 'PSAT1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTCHD3', 'PTEN', 'PTF1A', 'PTGS2', 'PTHLH', 'PTH', 'PTK2', 'PTK6', 'PTPN11', 'PTPRCAP', 'PTPRC', 'PXN', 'RAD51', 'RAF1', 'RALA', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RBX1', 'RCC1', 'RELA', 'RELB', 'REL', 'REM1', 'RET', 'RHEB', 'RHOA', 'RHOC', 'RICTOR', 'RNASE1', 'DROSHA', 'RND3', 'RNMT', 'ROCK1', 'RPRD1B', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KA6', 'RPS6KB1', 'RPS6', 'RPTOR', 'RREB1', 'RSF1', 'RUNX1', 'RUNX2', 'RUNX3', 'SDC1', 'SDHC', 'SENP1', 'SERPINE1', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHC1', 'SHFM1', 'SHH', 'SIRT1', 'SIX1', 'SIX3', 'SKP1', 'SKP2', 'SLC25A16', 'SLC25A6', 'SLC2A1', 'SLC35B2', 'SLC39A4', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMO', 'SNAI1', 'SNAI2', 'SNCA', 'SNIP1', 'SNW1', 'SNX33', 'SOCS3', 'SOX11', 'SOX17', 'SOX2', 'SOX4', 'SOX6', 'SOX9', 'SP1', 'SPN', 'SPP1', 'SPRY1', 'SRC', 'SREBF1', 'STAT1', 'STAT3', 'STAT4', 'STAT5A', 'STAT5B', 'STAT6', 'STC2', 'STIM1', 'STK11', 'STK24', 'STMN1', 'SUFU', 'SULF2', 'SUV39H1', 'TAF1', 'TBP', 'TBX2', 'TCEAL7', 'TCF4', 'TCF7L2', 'TCF7', 'TERT', 'TET3', 'TFDP1', 'TFF1', 'TGFA', 'TGFB1', 'TGFBR2', 'THBS1', 'THRA', 'THRB', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLR9', 'TM4SF1', 'TMPRSS4', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF8', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP2A', 'TP53', 'TP63', 'TP73', 'TRPV2', 'TSC22D3', 'TSC2', 'TWIST1', 'TXN', 'TYMS', 'UBA52', 'UBA7', 'UBB', 'UBC', 'UBE2C', 'UBTF', 'URGCP', 'USP18', 'USP2', 'USP9X', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VIP', 'VRK1', 'WDR77', 'WDTC1', 'WEE1', 'WHSC1', 'WIF1', 'WISP1', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'XBP1', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YY1', 'ZBTB17', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.0409666976219262e-15 NRMSE: 6.556527118952977e-16 MAPE: 4.027908300359966e-12 Pearson Correlation: -0.02107133090249835 Spearman Correlation: -0.023713512637314683 Coefficient of Determination: -2.401607510715201 RMSE: 0.508963426658769 NRMSE: 0.32517053619220876 MAPE: 487.8908411609749 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: RandomForests Pearson Correlation: 0.5725660808552688 Spearman Correlation: 0.5777514836309044 Coefficient of Determination: 0.2921330782375494 RMSE: 0.19150665868143912 NRMSE: 0.12062043905663555 MAPE: 522.6303552645559 Pearson Correlation: 0.3195302604994874 Spearman Correlation: 0.2940959363583087 Coefficient of Determination: 0.1009206436638419 RMSE: 0.26166370583173204 NRMSE: 0.16717375565845827 MAPE: 243.712224989962 Protein: ERBB2 Protein Interaction Partners Count: 663 x_train_column_count: 657 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACPP', 'ACTA2', 'ACTB', 'ACTG1', 'ADAM10', 'ADAM17', 'ADRB2', 'AFP', 'AGRN', 'AKT1S1', 'AKT1', 'AKT2', 'ALB', 'ALDH1A1', 'ALK', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'ANO1', 'ANXA2', 'ANXA5', 'AP2B1', 'APP', 'AREG', 'ARHGEF11', 'ARHGEF12', 'ARID1A', 'ARL6IP5', 'AR', 'ATM', 'ATP2B2', 'AURKB', 'AXIN1', 'BAG1', 'BARD1', 'BCAR1', 'BCAR3', 'BCAS1', 'BCL2L11', 'BCL2L1', 'BDNF', 'BECN1', 'BEST1', 'BIRC5', 'BLNK', 'BMI1', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BSG', 'BTC', 'MIEN1', 'CA9', 'CALU', 'CARTPT', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAV1', 'CBLB', 'CBLC', 'CBL', 'CCL27', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD19', 'CD22', 'CD247', 'CD24', 'CD274', 'CD28', 'CD33', 'CD34', 'CD44', 'CD46', 'CD52', 'CD68', 'CD6', 'CD80', 'CD82', 'CDC37', 'CDC42', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK4', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CEACAM5', 'CEP70', 'CHEK2', 'CHGA', 'CHKA', 'CHKB', 'CISH', 'CLDN3', 'CLDN4', 'CLDN7', 'CLTC', 'CNN1', 'COPS5', 'CPNE3', 'CREB1', 'CRKL', 'CRK', 'YBX3', 'CSF1', 'CSF2', 'CSF3', 'CSK', 'CSPG4', 'CTAG1B', 'CTLA4', 'CTNNB1', 'CTNND1', 'CTSB', 'CTSD', 'CTTN', 'CUL5', 'CXCL12', 'CXCR1', 'CXCR4', 'CYCS', 'CYP19A1', 'CYTIP', 'DCN', 'DDX41', 'DDX53', 'DHH', 'DIAPH1', 'DICER1', 'DLG4', 'DMTF1', 'DNAJA3', 'DNM2', 'DNMT1', 'DOCK1', 'DOCK7', 'DUSP6', 'E2F1', 'E2F3', 'EEA1', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EGFR', 'EGF', 'EIF3A', 'EIF4EBP1', 'EIF4E', 'ELAVL1', 'ELF3', 'EML4', 'ENO2', 'EP300', 'EPCAM', 'EPGN', 'EPHA2', 'EPS15', 'EPX', 'ERAL1', 'ERBB2IP', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ERRFI1', 'ESCO1', 'ESR1', 'ESR2', 'ESRRB', 'ETS1', 'ETS2', 'ETV4', 'ETV6', 'EZH2', 'EZR', 'FASLG', 'FASN', 'FBXW7', 'FCGR1A', 'FCGR1B', 'FCGRT', 'FGF10', 'FGF13', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FIGF', 'FLT1', 'FLT3LG', 'FN1', 'FOLH1', 'FOLR1', 'FOS', 'FOXA1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXP3', 'FREM2', 'FSIP1', 'FYN', 'GAB1', 'GABPB1', 'GAPDH', 'GATA3', 'GATA4', 'GDF2', 'GLI1', 'GLI2', 'GLS', 'GNA11', 'GNAQ', 'GNAS', 'GNRH1', 'GPER1', 'GRAP2', 'GRB2', 'GRB7', 'GSTP1', 'GZMB', 'H2AFX', 'H2AFY', 'HBEGF', 'HDAC1', 'HDAC6', 'HEATR6', 'HGF', 'HIF1A', 'HK1', 'HLA-A', 'HMGA2', 'HNF4A', 'HOXB7', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPG2', 'ICAM1', 'ID1', 'IDH1', 'IDH2', 'IFNG', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IHH', 'IL10', 'IL2', 'IL4', 'IL6R', 'IL6ST', 'IL6', 'CXCL8', 'ILK', 'INPP4B', 'INS', 'IQGAP1', 'IQSEC1', 'IRS1', 'ITGA5', 'ITGA6', 'ITGAV', 'ITGB1', 'ITGB3', 'ITGB4', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JUN', 'JUP', 'KDR', 'KITLG', 'KLK3', 'KLRK1', 'KRAS', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'L1CAM', 'LAMP1', 'LCN2', 'LDHA', 'LEP', 'LIN28A', 'LIN7A', 'LIN7B', 'LIN7C', 'LINGO1', 'LOX', 'LRIG1', 'LRPPRC', 'MAGEA1', 'MAGEA3', 'MAGED4B', 'MAGED4', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK8', 'MATK', 'MCL1', 'MDK', 'MDM2', 'MEMO1', 'MET', 'MGMT', 'MKI67', 'MLANA', 'MLH1', 'KMT2C', 'MME', 'MMP11', 'MMP14', 'MMP16', 'MMP1', 'MMP2', 'MMP7', 'MMP9', 'MPP1', 'MRAP', 'MRAS', 'MSH2', 'MSH6', 'MSLN', 'MTA1', 'MTOR', 'MUC13', 'MUC16', 'MUC1', 'MUC4', 'MUC6', 'MUCL1', 'MYBL2', 'MYCN', 'MYC', 'NANOG', 'NCAM1', 'NCL', 'NCOA1', 'NCOA3', 'NCOR1', 'NDRG1', 'NF1', 'NF2', 'NFE2L2', 'NGF', 'NISCH', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NR1H4', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NRP1', 'NTF3', 'NTF4', 'OPCML', 'OSMR', 'PA2G4', 'PADI2', 'PAK1', 'PALB2', 'PAQR3', 'PARP1', 'PAX2', 'PCSK9', 'PDCD1LG2', 'PDCD1', 'PDCD4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PDGFRA', 'PDPN', 'PECAM1', 'PELP1', 'PEPD', 'PFKFB3', 'PGAP3', 'PGF', 'PGR', 'PI3', 'PIK3C2A', 'PIK3C2B', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIN1', 'PIP', 'PLAUR', 'PLAU', 'PLCG1', 'PLCG2', 'PLEK', 'PLG', 'PLXNB1', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPP3CA', 'PRDM10', 'PRF1', 'PRKACA', 'PRL', 'PROM1', 'PSCA', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'PTPN1', 'PTPRC', 'PTPRO', 'PTPRU', 'PTS', 'PXN', 'RAB25', 'RAD51', 'RAF1', 'RANBP2', 'RARA', 'RASA1', 'RASA2', 'RASSF1', 'RB1', 'RBPJ', 'RDX', 'RECK', 'REM1', 'REN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'S100A14', 'SCGB2A2', 'SCUBE2', 'SDC1', 'SDHC', 'SEMA3D', 'SEMA4D', 'SERPINB5', 'SERPINE1', 'SFRP1', 'PEAK1', 'SH3BGRL3', 'SH3BGRL', 'SH3TC2', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SIAH2', 'PMEL', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC4A7', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SMUG1', 'SMYD3', 'SNAI1', 'SNAI2', 'SOCS1', 'SOS1', 'SOX10', 'SOX2', 'SOX9', 'SP3', 'SPP1', 'SPRY2', 'SRCIN1', 'SRC', 'STARD3', 'STAT1', 'STAT2', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STOM', 'STUB1', 'SYP', 'TAGLN', 'TBX1', 'TERT', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TFRC', 'TGFA', 'TGFB1', 'THBS1', 'THRA', 'TIMP1', 'TJP1', 'TMPRSS2', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF4', 'TNFRSF8', 'TNFRSF9', 'TNFSF11', 'TNF', 'TNS1', 'TNS3', 'TNS4', 'TOB1', 'TOP1', 'TOP2A', 'TP53', 'TP63', 'TSC2', 'TWIST1', 'TYMS', 'TYR', 'UBA52', 'UBB', 'UBC', 'USP2', 'USP9X', 'VAV1', 'VAV2', 'VAV3', 'VCL', 'VEGFA', 'VEGFB', 'VEGFC', 'VIM', 'WASL', 'WDFY2', 'WDTC1', 'WNT10A', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7B', 'WNT9A', 'WNT9B', 'WT1', 'WWOX', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YES1', 'YY1', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 4.022396044240401e-15 NRMSE: 6.852813677428831e-16 MAPE: 5.2124883112939395e-12 Pearson Correlation: 0.35827757169925506 Spearman Correlation: 0.2704796817915435 Coefficient of Determination: -2.509776476747492 RMSE: 1.6256216592772896 NRMSE: 0.3596905983576258 MAPE: 1807.8954505779013 Predictor: ElasticNet Pearson Correlation: 0.838680926814167 Spearman Correlation: 0.651705511434577 Coefficient of Determination: 0.43225814136889984 RMSE: 0.7745240625511022 NRMSE: 0.13195292136754896 MAPE: 589.2074999333701 Pearson Correlation: 0.7867059076875195 Spearman Correlation: 0.6578261574333846 Coefficient of Determination: 0.40427657295599373 RMSE: 0.6697335992482986 NRMSE: 0.14818754270346246 MAPE: 432.04775698299943 Predictor: RandomForests Pearson Correlation: 0.8566837515184769 Spearman Correlation: 0.6907002191586037 Coefficient of Determination: 0.7274982219685785 RMSE: 0.536591918208216 NRMSE: 0.09141726463161932 MAPE: 545.7807910694142 Pearson Correlation: 0.7987754299331115 Spearman Correlation: 0.6345402564362305 Coefficient of Determination: 0.6239960700040706 RMSE: 0.5320787808011717 NRMSE: 0.11772956760729543 MAPE: 236.99238278934894 Protein: ERBB3 Protein Interaction Partners Count: 245 x_train_column_count: 247 x_train columns: ['ADAM17', 'AGRN', 'AGTR2', 'AKT1', 'AKT2', 'AKT3', 'ALAS2', 'ALB', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'APIP', 'AREG', 'AR', 'BAMBI', 'BDNF', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BTC', 'CADM4', 'CASK', 'CASP3', 'CBLB', 'CBLC', 'CBL', 'CCND1', 'CCNE1', 'CD44', 'CD82', 'CDC42', 'CDH1', 'CDK4', 'CDK5', 'CDKN1B', 'CDKN2A', 'CLEC16A', 'COMMD5', 'COQ7', 'CRKL', 'CRK', 'CRYZL1', 'CSF1', 'CSK', 'CSPG5', 'CTNNB1', 'DCN', 'DHH', 'DOCK7', 'DUSP6', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EIF4EBP1', 'EIF4E', 'EML4', 'EPCAM', 'EPGN', 'EPN1', 'ERBB2IP', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'ESR2', 'FBXO9', 'FGF10', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FIGF', 'FKBP14', 'FLNA', 'FLT3LG', 'FN1', 'FOXA1', 'FOXO3', 'FREM2', 'FTSJ1', 'GAB1', 'GAPDH', 'GLE1', 'GRB2', 'GRB7', 'GRHL2', 'HBEGF', 'HGF', 'HGS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPG2', 'IGF1', 'IGF2', 'IL6ST', 'ILK', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'ITPKB', 'JAK1', 'JAK2', 'JUN', 'KDR', 'KITLG', 'KRAS', 'L1CAM', 'LAMA1', 'LAMB1', 'LAMC2', 'LIN7A', 'LIN7B', 'LIN7C', 'LRIG1', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARCH7', 'MDM2', 'MET', 'MITF', 'MMP9', 'MRPL49', 'MTOR', 'MUC1', 'MUC4', 'MYC', 'N4BP1', 'NDRG1', 'NEDD4L', 'NEDD4', 'NF1', 'NGF', 'NICN1', 'NOTCH1', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NTF3', 'NTF4', 'OAT', 'PA2G4', 'PARK7', 'PCSK9', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PGR', 'PI3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIP5K1C', 'PLCG1', 'PLCG2', 'PPP1R9A', 'PRKACA', 'PTEN', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN22', 'PTPN2', 'RASA1', 'RASA2', 'REM1', 'RGS4', 'RHOA', 'RHOC', 'RNF41', 'ROR1', 'RRAS2', 'SH2B3', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SLC25A16', 'SMAD4', 'SNAI2', 'SOS1', 'SOX10', 'SOX2', 'SPARC', 'SPRY2', 'SRC', 'STAT3', 'STAT5A', 'STAT5B', 'SYN3', 'TCF7L2', 'TGFA', 'TMEFF2', 'TNFRSF13C', 'TNS1', 'TP53', 'USP8', 'VAV1', 'VAV2', 'VAV3', 'VEGFA', 'VEGFB', 'VEGFC', 'WNT1', 'WNT5A', 'ZEB1', 'ZNF217', 'KRBOX4', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.7466876386492644 Spearman Correlation: 0.7360795558698706 Coefficient of Determination: 0.5575424297116145 RMSE: 0.3119072751471754 NRMSE: 0.08417482131745108 MAPE: 190.37028687763916 Pearson Correlation: 0.13384317382460076 Spearman Correlation: 0.1755408421551391 Coefficient of Determination: -1.132966189948784 RMSE: 0.6089704546260403 NRMSE: 0.29463841159743387 MAPE: 380.7473758304729 Predictor: ElasticNet Pearson Correlation: 0.39202313256316007 Spearman Correlation: 0.40348596551968785 Coefficient of Determination: 0.06536484843515367 RMSE: 0.45332612187275645 NRMSE: 0.12233970909837523 MAPE: 239.53312792560672 Pearson Correlation: 0.5324055883268957 Spearman Correlation: 0.5288669434780983 Coefficient of Determination: 0.05099194175873234 RMSE: 0.4061993151665841 NRMSE: 0.19653157243259473 MAPE: 228.8449442320137 Predictor: RandomForests Pearson Correlation: 0.543783700878312 Spearman Correlation: 0.5318965825486458 Coefficient of Determination: 0.27033054769490783 RMSE: 0.4005463439783744 NRMSE: 0.10809596190992625 MAPE: 251.16263272132832 Pearson Correlation: 0.5443611277287489 Spearman Correlation: 0.5831419344380854 Coefficient of Determination: 0.24615476712952655 RMSE: 0.36203064429982834 NRMSE: 0.17516142725117975 MAPE: 228.10624964382416
TMM
scenario = Scenario.AllInteractionPartners_Mutations
normalizeTechnique = NormalizeTechnique.TMM
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12.2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 6.676054 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SH-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SJ-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SK-01 | 6.676054 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SQ-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 Protein Interaction Partners Count: 369 x_train_column_count: 366 x_train columns: ['AATF', 'ABCC1', 'ABL1', 'ACTL6A', 'ACTL6B', 'AFAP1', 'AHR', 'AKT1', 'ANXA5', 'ARID1A', 'ARID1B', 'ARID4A', 'ARMCX1', 'ARMCX2', 'ARMCX3', 'ARNT', 'AR', 'ASF1A', 'ATF2', 'ATM', 'AURKB', 'BCR', 'BDP1', 'BGLAP', 'BRCA1', 'BRF1', 'FAM208A', 'C4BPA', 'CABIN1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CBFB', 'CBX1', 'CBX4', 'CBX5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNT2', 'CDC25A', 'CDC27', 'CDC6', 'CDH1', 'CDK14', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPA', 'CEBPB', 'CEBPD', 'CEBPE', 'CHEK1', 'CHEK2', 'CLNK', 'COL1A1', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUX1', 'DCAF10', 'DGKZ', 'DNAJA3', 'DNMT1', 'DNMT3A', 'DUSP1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EGFR', 'EGF', 'EID1', 'EIF2AK1', 'EIF2AK4', 'AGO2', 'ELF1', 'ENC1', 'EP300', 'ERBB2', 'ESD', 'ESR1', 'ESR2', 'EZH2', 'FBXW7', 'FMO5', 'FOS', 'FOXM1', 'FRK', 'FZR1', 'G6PD', 'GAPDH', 'GATA1', 'GJA1', 'GNB2L1', 'GRB2', 'GSC', 'GTF2H1', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HARS2', 'HARS', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC8', 'HDC', 'HES1', 'HIF1A', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HIST4H4', 'HMGA1', 'HMGA2', 'HRAS', 'HSP90AA1', 'HSPA1A', 'HSPA8', 'ID2', 'IFI16', 'INS', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'KDM2A', 'KDM4A', 'KDM5A', 'KDM5B', 'PPP1R26', 'KIF11', 'KRAS', 'KRT10', 'KRT14', 'KRT5', 'L3MBTL2', 'L3MBTL1', 'LIMD1', 'LIN52', 'LIN54', 'LIN9', 'LMNA', 'LOR', 'LPAR6', 'MAF', 'MAP2K7', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEF2C', 'MORF4L1', 'MRFAP1', 'MRPL11', 'MRPS18B', 'MSH6', 'MTL5', 'MYBL2', 'MYC', 'MYOD1', 'NACC2', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NCR1', 'NDC80', 'NEO1', 'NFYA', 'NFYB', 'NFYC', 'NGF', 'NOTCH1', 'NPM1', 'NRAS', 'ORC1', 'PA2G4', 'PAX2', 'PAX3', 'PAX5', 'PAX6', 'PAX8', 'PCNA', 'PELP1', 'PGR', 'PHB', 'PHF21B', 'PIAS4', 'PIK3CA', 'PIK3R1', 'PIK3R3', 'PLK1', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPIA', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP1R3A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R3B', 'PPRC1', 'PRB1', 'PRB3', 'PRB4', 'PRDM2', 'PRH1', 'PRH2', 'PRIM1', 'PRIM2', 'PRKCB', 'PRMT2', 'PSMA7', 'PSMC1', 'PSMD10', 'PTEN', 'PTGDR', 'RAF1', 'RB1CC1', 'RBAK', 'RBBP4', 'RBBP5', 'RBBP6', 'RBBP7', 'RBBP8', 'RBBP9', 'RBL1', 'RBL2', 'RBFOX2', 'RFC1', 'RPS6KB1', 'RUNX2', 'S100A6', 'SETD1B', 'SETD7', 'SIRT1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMC1A', 'SMC2', 'SMC4', 'SMC5', 'SMYD2', 'SNW1', 'SP100', 'SP1', 'SP3', 'SPI1', 'STAM', 'STAT3', 'SUV39H1', 'SUV420H2', 'SUZ12', 'TAF1', 'TBP', 'TERT', 'TFAP2A', 'TFDP1', 'TFDP3', 'TGM2', 'THAP1', 'TMPO', 'TNS1', 'TOP2A', 'TP53BP1', 'TP53', 'TP73', 'TRDMT1', 'TRIM27', 'TTK', 'UBE2I', 'UBE3A', 'UBL4A', 'UBN1', 'UBR4', 'UBTF', 'UHRF1', 'USP4', 'USP7', 'VEGFA', 'VPS39', 'WDR59', 'WDR73', 'WEE1', 'WWTR1', 'YAP1', 'YY1', 'ZBTB16', 'ZBTB7A', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.33046056645948435 Spearman Correlation: 0.2771064667534188 Coefficient of Determination: 0.009365095502181231 RMSE: 0.22305009637182285 NRMSE: 0.0844726742555663 MAPE: 747.345961153187 Pearson Correlation: 0.014870457391667827 Spearman Correlation: 0.13955384853252986 Coefficient of Determination: -2.015407815723006e+25 RMSE: 1259105376917.19 NRMSE: 622016953072.1261 MAPE: 166633091038899.38 Predictor: ElasticNet Pearson Correlation: 0.19955788537082556 Spearman Correlation: 0.19074908558074266 Coefficient of Determination: 0.022389776542377615 RMSE: 0.2215789344151379 NRMSE: 0.08391552146000299 MAPE: 236.5806606768442 Pearson Correlation: 0.17639005510090486 Spearman Correlation: 0.24637437385062355 Coefficient of Determination: -0.01835367004262145 RMSE: 0.28302834105129954 NRMSE: 0.13982024821848282 MAPE: 140.24950562517913 Predictor: RandomForests Pearson Correlation: 0.34640391294771294 Spearman Correlation: 0.2975793748927845 Coefficient of Determination: 0.060180625637315854 RMSE: 0.21725400890828722 NRMSE: 0.08227760231330702 MAPE: 255.51886800674325 Pearson Correlation: 0.17938316700021897 Spearman Correlation: 0.2588771827138816 Coefficient of Determination: -0.006884013298748881 RMSE: 0.2814299620193127 NRMSE: 0.1390306249879276 MAPE: 134.567353650117 Protein: CDH1 Protein Interaction Partners Count: 834 x_train_column_count: 823 x_train columns: ['ABCB1', 'ABCG2', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTR3', 'ACVR1B', 'ADAM10', 'ADAM15', 'ADAM17', 'ADAM9', 'AFP', 'AIMP1', 'AJAP1', 'AKAP9', 'AKT1', 'AKT2', 'AKTIP', 'ALB', 'ALCAM', 'ALDH1A1', 'ALDH3A1', 'ALK', 'AMOTL2', 'ANAPC4', 'ANAPC7', 'ANO1', 'ANXA2', 'ANXA5', 'AP1M1', 'AP1M2', 'APC2', 'APC', 'AQP1', 'AQP5', 'AREG', 'ARF6', 'ARHGAP31', 'ARID1A', 'ARL2BP', 'ARMC7', 'ARPC1A', 'ARPC2', 'ARRB2', 'ARVCF', 'AR', 'CLMP', 'ASF1A', 'ATF2', 'ATF3', 'ATM', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BAG3', 'BANP', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL6B', 'BCL9L', 'BCORL1', 'BMI1', 'BMP2', 'BMP4', 'BMP6', 'BMP7', 'BNIP3', 'BRCA1', 'BRCA2', 'BSG', 'BTBD7', 'BTC', 'BTF3', 'ANAPC15', 'CA2', 'CA9', 'CALCA', 'CALR', 'CAPN1', 'CAPNS1', 'CASP3', 'CASP8', 'CASP9', 'CASS4', 'CAV1', 'CBLL1', 'CBL', 'CBX7', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CCR7', 'CD1A', 'CD1B', 'CD1C', 'CD1E', 'CD207', 'CD24', 'CD274', 'CD276', 'CD2AP', 'CD34', 'CD44', 'CD46', 'CD68', 'CD82', 'CDC16', 'CDC23', 'CDC27', 'CDC42', 'CDC6', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH24', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK14', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN3', 'CDX2', 'CEACAM5', 'CFL1', 'CGN', 'CHGA', 'CHL1', 'CLCA2', 'CLDN1', 'CLDN2', 'CLDN3', 'CLDN4', 'CLDN5', 'CLDN7', 'CNTN1', 'COL1A1', 'CORO1C', 'CRB3', 'CREB1', 'CREBBP', 'CRYAB', 'YBX3', 'CSDC2', 'CSE1L', 'CSF2', 'CSNK2A1', 'CSNK2A2', 'CST5', 'CTBP1', 'CTBP2', 'CTCF', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTSL', 'CTTN', 'CXCL12', 'CXCL1', 'CXCR4', 'CYP1B1', 'DAAM1', 'DAB2IP', 'DACH1', 'DAPK1', 'DAP', 'DDR1', 'DDR2', 'DDX3X', 'DICER1', 'DKK1', 'DLC1', 'DLG1', 'DLG5', 'DNM2', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOT1L', 'DPAGT1', 'DPEP1', 'DSP', 'DUOX1', 'DUSP4', 'DVL1', 'DVL2', 'E2F1', 'ECT2', 'EDN1', 'EFEMP1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'EHD1', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'ELAVL1', 'ELF3', 'ENAH', 'ENG', 'EP300', 'EPB41L3', 'EPCAM', 'EPHA10', 'EPHA1', 'EPHA2', 'EPPK1', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ESRP1', 'ESRP2', 'ETS1', 'ETS2', 'EXOC3', 'EXOC4', 'EYA2', 'EZH2', 'EZR', 'F11R', 'F2RL2', 'SUPT20H', 'FBXL5', 'FER', 'FGF10', 'FGF13', 'FGF17', 'FGF19', 'FGF2', 'FGF4', 'FGF5', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FMN1', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC1', 'FOXC2', 'FOXJ2', 'FOXK2', 'FOXL1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXQ1', 'FRMPD2', 'FSCN1', 'FUT4', 'FXYD5', 'FYN', 'FZD1', 'FZD4', 'FZD7', 'FZR1', 'G6PD', 'GAB2', 'GABPA', 'GADD45A', 'GAPDH', 'GAS6', 'GATA1', 'GATA3', 'GATA4', 'GATA6', 'GDNF', 'GFRA1', 'GGT1', 'GJA1', 'GJB1', 'GJB2', 'GKN2', 'GLI1', 'GLI2', 'GMNN', 'GNA12', 'GNA13', 'GNB2L1', 'GNL3', 'GPA33', 'GRB2', 'GRHL2', 'GRHL3', 'GSK3B', 'GSN', 'GSTP1', 'H2AFZ', 'HAVCR2', 'HBEGF', 'HDAC1', 'HDAC2', 'HEPACAM', 'HES1', 'HGF', 'HGS', 'HIF1A', 'HMGA2', 'HNF4A', 'HOXB4', 'HOXD10', 'HPGDS', 'HPGD', 'HRAS', 'HSP90AA1', 'HSPA5', 'ICAM1', 'ID1', 'ID2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP3', 'IL10', 'IL15', 'IL17A', 'IL1B', 'IL24', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IQSEC1', 'IRS1', 'IRS2', 'ITGA5', 'ITGA6', 'ITGAE', 'ITGAM', 'ITGB1', 'ITGB4', 'ITGB7', 'ITPKB', 'IVL', 'JAG1', 'JAK2', 'AJUBA', 'JUN', 'JUP', 'KDM1A', 'KDM6A', 'KDR', 'KEAP1', 'KIFC3', 'KIT', 'KLF4', 'KLF5', 'KLF8', 'KLK3', 'KLK7', 'KLRG1', 'KRAS', 'KRT10', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'KRT9', 'LAMA1', 'LAMB1', 'LAMC2', 'LASP1', 'LATS1', 'LATS2', 'LCN2', 'LEF1', 'LEP', 'LGALS3', 'LGALS4', 'LGALS9', 'LGR5', 'LIF', 'LIMA1', 'LIN28A', 'LIPG', 'LLGL2', 'LMNA', 'LOR', 'LOXL2', 'LOXL3', 'LOX', 'LRP5', 'LRP6', 'LY6K', 'MACC1', 'MACROD1', 'MAD2L2', 'MAGI1', 'MAP2K1', 'MAP2K7', 'MAP4K5', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARK2', 'MARVELD2', 'MCAM', 'MCL1', 'MDM2', 'MED1', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGAT5', 'MGMT', 'MKI67', 'MLH1', 'MLLT4', 'MME', 'MMP11', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP1', 'MMP25', 'MMP27', 'MMP2', 'MMP3', 'MMP7', 'MMP8', 'MMP9', 'MPP5', 'MRAP', 'MSH2', 'MSN', 'MT1G', 'MTA1', 'MTA3', 'MTBP', 'MTDH', 'MTOR', 'MUC1', 'MUC4', 'MYCN', 'MYC', 'MYH6', 'MYO6', 'MYO7A', 'NANOG', 'NCAM1', 'NCOA1', 'NCSTN', 'NDRG1', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEUROG3', 'NF2', 'NFE2L2', 'NFIC', 'NKD2', 'NME1', 'NOG', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NR2F1', 'NRP2', 'NUDT21', 'NUMBL', 'NUMB', 'NUP98', 'NUTF2', 'OTUB1', 'OVOL1', 'OVOL2', 'PARD3', 'PARD6A', 'PAX2', 'PAX5', 'PAX6', 'PAX8', 'PCSK9', 'PDCD4', 'PDGFRB', 'PDPN', 'PEBP1', 'PECAM1', 'PGR', 'PHLPP1', 'PI3', 'PIK3CA', 'PIK3R1', 'PIP5K1A', 'PIP5K1C', 'PIP', 'PIR', 'PITX1', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAUR', 'PLAU', 'PLCD1', 'PLEKHA7', 'PLG', 'PODXL', 'POLR2C', 'POSTN', 'POTEF', 'POU5F1', 'PPARA', 'PPARGC1A', 'PPARG', 'PPL', 'PPP6C', 'PRAME', 'PRDM10', 'PRKAR1A', 'PRKCA', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRKG1', 'PRMT5', 'PROC', 'PROM1', 'PRSS8', 'PSEN1', 'PTCH1', 'PTEN', 'PTF1A', 'PTGS2', 'PTK2', 'PTPN11', 'PTPN14', 'PTPRC', 'PTPRF', 'PTPRJ', 'PTPRM', 'PTPRS', 'PTPRT', 'PTPRU', 'PTRH2', 'PVRL1', 'PVRL2', 'PVR', 'PXN', 'RAB11A', 'RAB25', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RACGAP1', 'RAF1', 'RALA', 'RALBP1', 'RALGDS', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RARB', 'RASSF1', 'RB1', 'RBM4', 'RCOR1', 'RDX', 'REM1', 'RET', 'RHOA', 'RHOB', 'RHOC', 'RHOD', 'RICTOR', 'RND3', 'ROCK1', 'ROCK2', 'RPS6KB1', 'RPTOR', 'RRM2', 'RUNX2', 'RUNX3', 'S100A14', 'S100A4', 'S100A8', 'SATB1', 'SCRIB', 'SDC1', 'SDC4', 'SDHC', 'SELE', 'SELL', 'SELP', 'SEMA3C', 'SEMA3F', 'SENP1', 'SERPINB4', 'SERPINB5', 'SERPINE1', 'SFN', 'SFRP1', 'SFRP2', 'SFTPC', 'SHH', 'SIK1', 'SIN3A', 'SIRT1', 'SIRT2', 'SIRT4', 'SIRT7', 'SIX1', 'SIX2', 'SKIL', 'SKP2', 'SLC2A1', 'SLC39A6', 'SLC6A3', 'SLC9A3R1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SNAI1', 'SNAI2', 'SNAI3', 'SNX16', 'SNX1', 'SOX10', 'SOX17', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPARC', 'SPDEF', 'SPINT1', 'SPP1', 'SPRY1', 'SRCIN1', 'SRC', 'SRXN1', 'ST14', 'ST7L', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STX4', 'STYK1', 'SUCLG2', 'SUMO1', 'SUZ12', 'SYNJ2', 'SYP', 'TACC3', 'TACSTD2', 'TATDN1', 'TBX1', 'TBX3', 'TCF15', 'TCF4', 'TDGF1', 'TERT', 'TET2', 'TFF1', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBI', 'TGFBR1', 'TGFBR2', 'THBS1', 'THEM4', 'THUMPD1', 'THY1', 'TIAM1', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLN1', 'TLR4', 'TMPRSS2', 'TMPRSS4', 'TNFRSF6B', 'TNF', 'TNK2', 'TNS1', 'TP53BP1', 'TP53BP2', 'TP53', 'TRIM21', 'TRIM29', 'TRIM44', 'TRIP10', 'TRPS1', 'TSPYL2', 'TWIST1', 'TWIST2', 'TYRP1', 'T', 'UBE2I', 'UBE2S', 'USP48', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VEZT', 'VHL', 'VIM', 'VIPAS39', 'VPS33B', 'VTN', 'WASL', 'WDFY2', 'WDTC1', 'WIF1', 'WISP1', 'WISP3', 'WNT10A', 'WNT10B', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT9A', 'WNT9B', 'WT1', 'XIAP', 'YAP1', 'YBX1', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 0.8262899690285619 Spearman Correlation: 0.7644246264399195 Coefficient of Determination: 0.6673783384158654 RMSE: 0.6508043780094707 NRMSE: 0.10939175667884804 MAPE: 536.0104091967695 Pearson Correlation: -0.012463867412319137 Spearman Correlation: 0.29449361149413583 Coefficient of Determination: -4.218854983132422e+23 RMSE: 753649784789.1265 NRMSE: 122064362150.42053 MAPE: 145409824744692.47 Predictor: ElasticNet Pearson Correlation: 0.7014305633514655 Spearman Correlation: 0.6450457314474335 Coefficient of Determination: 0.4465560227593387 RMSE: 0.8394832482546208 NRMSE: 0.14110622228743228 MAPE: 471.5413408216152 Pearson Correlation: 0.5334643032923599 Spearman Correlation: 0.441986147692908 Coefficient of Determination: 0.2795835544580809 RMSE: 0.9848363953538122 NRMSE: 0.1595083404090914 MAPE: 261.31317753565855 Predictor: RandomForests Pearson Correlation: 0.6179503314591506 Spearman Correlation: 0.5357059780354199 Coefficient of Determination: 0.37894539925557424 RMSE: 0.8892832107849575 NRMSE: 0.1494769486805099 MAPE: 315.94200203979136 Pearson Correlation: 0.6164759773274996 Spearman Correlation: 0.617463643037705 Coefficient of Determination: 0.36986518304397664 RMSE: 0.921062326334673 NRMSE: 0.14917921776662127 MAPE: 194.22167313572487 Protein: CDH2 Protein Interaction Partners Count: 472 x_train_column_count: 466 x_train columns: ['ABCG2', 'ABL1', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTR3', 'ADAM10', 'ADH1A', 'AFP', 'AHSG', 'AKT1', 'AKT3', 'ALB', 'ALCAM', 'ALDH1A1', 'AMBN', 'AMELX', 'AMOTL1', 'AMTN', 'ANGPT1', 'ANO8', 'ANXA5', 'APC2', 'APC', 'APLP2', 'APOA1', 'APOA2', 'APOA5', 'APOB', 'APOE', 'APOL1', 'APPL1', 'APP', 'ARHGAP32', 'ARMC7', 'ARPC5', 'ARVCF', 'AR', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BCL2L1', 'BDNF', 'BMI1', 'BMP15', 'BMP2', 'BMP4', 'BMP7', 'BNIP2', 'BOC', 'BPIFB2', 'RGCC', 'GSKIP', 'C3', 'C4A', 'CABLES1', 'CADM1', 'CALU', 'CASP3', 'CAV1', 'CBLL1', 'CCNA2', 'CCNB1', 'CCND1', 'CD24', 'CD34', 'CD44', 'CD80', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK4', 'CDK5', 'CDK6', 'CDKN2A', 'CDON', 'CDX2', 'CEBPZ', 'CFL1', 'CHGB', 'CHL1', 'CHRDL1', 'CKAP4', 'CLDN11', 'CLDN3', 'CLDN4', 'CLDN7', 'CORT', 'CP', 'CREBBP', 'CRP', 'CSF1', 'CSK', 'CST3', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTTN', 'CXCL12', 'CXCR4', 'CYLD', 'CYR61', 'DBN1', 'DDR1', 'DDR2', 'DKK1', 'DLG4', 'DLG5', 'DMP1', 'DNAJC3', 'DSP', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EFNB2', 'EFNB3', 'EGFR', 'EGF', 'EHMT2', 'EIF2AK3', 'ENAM', 'ENG', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA4', 'EPHB2', 'EPS8', 'ERBB2', 'ERBB4', 'ESR1', 'ESRP1', 'EXOC4', 'EZH2', 'EZR', 'F11R', 'F5', 'EVA1A', 'FAM20A', 'FAM20C', 'FBN1', 'FER', 'FGA', 'FGF13', 'FGF23', 'FGF2', 'FGFR1', 'FGFR4', 'FGG', 'FN1', 'FOXC2', 'FOXD3', 'FOXO1', 'FOXP4', 'FSTL1', 'FSTL3', 'FUCA2', 'GAA', 'GAPDH', 'GAS6', 'GATA4', 'GFAP', 'GJA10', 'GJA1', 'GJA3', 'GJB6', 'GJC1', 'GJC3', 'GJD3', 'GJD4', 'GLI1', 'GOLM1', 'GPC3', 'GRIA1', 'GRIA2', 'HGF', 'HMGA2', 'HNF4A', 'HRAS', 'HRC', 'HSP90B1', 'HSPA5', 'IARS2', 'IGF1R', 'IGF1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL1B', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'INVS', 'IQGAP1', 'ISL1', 'ITGA6', 'ITGB1', 'ITIH2', 'ITPKB', 'JAG1', 'JAM3', 'JUN', 'JUP', 'KCNA5', 'KDR', 'KIAA2022', 'KIF5B', 'KIT', 'KLF4', 'KNG1', 'KRAS', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT8', 'KTN1', 'L1CAM', 'LAMB1', 'LAMB2', 'LAMC1', 'LEF1', 'LGALS1', 'LRP5', 'LRP6', 'LRRC7', 'LTBP1', 'LTBP3', 'MAP1B', 'MAP2K6', 'MAP2K7', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MATN3', 'MBTPS1', 'MCAM', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEPE', 'MET', 'MFGE8', 'MFI2', 'MGAT4A', 'MIA3', 'MKI67', 'MLLT4', 'MMP14', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MPDZ', 'MPP5', 'MRAP', 'MRPL49', 'MSLN', 'MSN', 'MTHFD1', 'MUC1', 'MUC4', 'MXRA8', 'MYC', 'MYO10', 'MZF1', 'NANOG', 'NCAM1', 'NCSTN', 'NDRG1', 'NENF', 'NES', 'NFASC', 'NGF', 'NLGN1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTUM', 'NRCAM', 'NT5C', 'NT5E', 'NTRK2', 'NUCB1', 'NUMBL', 'NUMB', 'OLFM3', 'P4HB', 'PARD3', 'PAX6', 'PCSK9', 'PC', 'PDGFRB', 'PDIA4', 'PDIA6', 'PECAM1', 'PENK', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PITX2', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PNPLA2', 'POU5F1', 'PPT2', 'PRKCDBP', 'PRKCSH', 'PROC', 'PROM1', 'PRPH', 'PRSS23', 'PSEN1', 'PTEN', 'PTK2', 'PTPN11', 'PTPN1', 'PTPN2', 'PTPRC', 'PTPRS', 'PVRL1', 'PVRL2', 'PVRL3', 'PXN', 'QSOX1', 'RAB11FIP1', 'RAB3D', 'RAB5A', 'RAC1', 'RCN1', 'RELN', 'REM1', 'RHOA', 'RHOB', 'RHOC', 'ROBO1', 'PTBP3', 'RPS6KB1', 'RUNX2', 'S100A14', 'S100A4', 'SARS2', 'SCARB2', 'SCG2', 'SCG3', 'SDC2', 'SEMA3A', 'SENP3', 'SERPINA10', 'SERPINA1', 'SERPINC1', 'SERPIND1', 'SERPINE1', 'SHH', 'SHISA5', 'SIRT7', 'SKP1', 'SLC2A1', 'SLC9A3R1', 'SLIT1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SNAI1', 'SNAI2', 'SNAI3', 'SOX10', 'SOX18', 'SOX1', 'SOX2', 'SOX4', 'SOX9', 'SP7', 'SPAG9', 'SPARCL1', 'SPARC', 'SPP1', 'SPP2', 'SRC', 'ST6GALNAC5', 'STAT3', 'STC2', 'SYP', 'TBX1', 'TCF3', 'TEK', 'TF', 'TGFB1', 'TGFBR1', 'TGM2', 'TGOLN2', 'THY1', 'TIMP1', 'TJP1', 'TJP3', 'TMEM132A', 'TNC', 'TNF', 'TNNT1', 'TP53', 'TRPS1', 'TSC2', 'TWIST1', 'TWIST2', 'USP9X', 'VANGL2', 'VCAM1', 'VCAN', 'VCL', 'VEGFA', 'VGF', 'VIM', 'VTN', 'VWA1', 'WFS1', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7A', 'XIRP1', 'ZBTB16', 'ZEB1', 'ZEB2', 'ZSCAN1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.5841730852836984 Spearman Correlation: 0.534025536862028 Coefficient of Determination: 0.2971014071716157 RMSE: 0.3112059027776273 NRMSE: 0.11496891346005804 MAPE: 682.0199114839742 Pearson Correlation: 0.05103450854590949 Spearman Correlation: 0.2995468066460225 Coefficient of Determination: -4.351593493441888e+24 RMSE: 782507626819.4453 NRMSE: 403833218155.259 MAPE: 46582164831352.805 Predictor: ElasticNet Pearson Correlation: 0.36275709156232283 Spearman Correlation: 0.3782293046478719 Coefficient of Determination: 0.10742438831421941 RMSE: 0.35069049657221013 NRMSE: 0.12955572176432933 MAPE: 847.9086461612543 Pearson Correlation: 0.300769775001303 Spearman Correlation: 0.3221295483367477 Coefficient of Determination: 0.07730784253753809 RMSE: 0.360323704980519 NRMSE: 0.1859543298655721 MAPE: 125.3031154400098 Predictor: RandomForests Pearson Correlation: 0.3930896273647824 Spearman Correlation: 0.38319172534308454 Coefficient of Determination: 0.120151901245661 RMSE: 0.3481812169379879 NRMSE: 0.12862871764731515 MAPE: 848.6427361013506 Pearson Correlation: 0.21415192131705016 Spearman Correlation: 0.33831821285728225 Coefficient of Determination: 0.030384821456788336 RMSE: 0.3693721288918787 NRMSE: 0.19062400211171943 MAPE: 122.12364369998684 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.3634134091854665 Spearman Correlation: 0.34540202187490804 Coefficient of Determination: 0.13206930597580324 RMSE: 0.1945237105266872 NRMSE: 0.1364733895483858 MAPE: 462.0611521290291 Pearson Correlation: 0.3464992978966692 Spearman Correlation: 0.3814140552658201 Coefficient of Determination: 0.10156265161099176 RMSE: 0.19391242664589556 NRMSE: 0.14842016260564064 MAPE: 259.1301632877285 Predictor: ElasticNet Pearson Correlation: 0.2781616656582001 Spearman Correlation: 0.27514400799473704 Coefficient of Determination: 0.048078994950823906 RMSE: 0.2037185031573505 NRMSE: 0.1429242459149622 MAPE: 159.83259207046328 Pearson Correlation: 0.30995638542042636 Spearman Correlation: 0.3125018428696387 Coefficient of Determination: 0.059123337832618694 RMSE: 0.19843948471565462 NRMSE: 0.1518851633096223 MAPE: 164.77057939081445 Predictor: RandomForests Pearson Correlation: 0.32509813127473014 Spearman Correlation: 0.32484248783073005 Coefficient of Determination: 0.09454479850987119 RMSE: 0.19868427934120866 NRMSE: 0.13939234954061336 MAPE: 226.97021867144983 Pearson Correlation: 0.36521737800947096 Spearman Correlation: 0.3515918465632082 Coefficient of Determination: 0.11242472294899775 RMSE: 0.1927366654007862 NRMSE: 0.14752023742702788 MAPE: 214.45523394455424 Protein: PTEN Protein Interaction Partners Count: 884 x_train_column_count: 875 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ABTB1', 'ACTB', 'ACTG1', 'ADM', 'AEBP1', 'AFP', 'AKT1S1', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'AMHR2', 'ANXA2', 'ANXA5', 'APAF1', 'APC', 'ARAF', 'AREG', 'ARHGAP21', 'ARID1A', 'ARID2', 'ARL2BP', 'AR', 'ATF3', 'ATG12', 'ATG5', 'ATG7', 'ATM', 'ATRX', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'AXL', 'BAD', 'BAG5', 'BARD1', 'BAX', 'BBC3', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BIRC3', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BNIP3', 'BRAF', 'BRCA1', 'BRCA2', 'BRD4', 'BTG2', 'BTK', 'SPRTN', 'CLHC1', 'CA9', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBL', 'CBX7', 'CCL2', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD24', 'CD274', 'CD34', 'CD44', 'CD79A', 'CD79B', 'CDC14A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC7', 'CDH17', 'CDH1', 'CDH2', 'CDIPT', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CENPC', 'CFL1', 'CFLAR', 'CFTR', 'CHD1', 'CHD8', 'CHEK1', 'CHEK2', 'CHKA', 'CHORDC1', 'CHUK', 'CLTCL1', 'CLTC', 'CNOT6L', 'CREB1', 'CREBBP', 'CRP', 'CSF1R', 'CSF1', 'CSK', 'CSN2', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTGF', 'CTLA4', 'CTNNB1', 'CUL1', 'CUL3', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'DAPK1', 'DAXX', 'DBN1', 'DCAF13', 'DDIT4', 'DDR2', 'DECR1', 'DEPTOR', 'DGCR8', 'DICER1', 'DLC1', 'DLG1', 'DLG4', 'DNM1L', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOLPP1', 'DUSP1', 'DUSP6', 'DUT', 'DVL1', 'DYRK1A', 'E2F1', 'E2F2', 'E2F3', 'ECSCR', 'EGFR', 'EGF', 'EGR1', 'EIF2AK2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4EBP2', 'EIF4E', 'EIF4G1', 'EML4', 'ENDOG', 'EP300', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA3', 'EPHA4', 'EPHA5', 'EPHA7', 'EPHB1', 'EPHB2', 'EPHB3', 'EPHB4', 'ERBB2', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ESR1', 'ETS1', 'ETS2', 'ETV1', 'ETV6', 'EYA2', 'EZH2', 'EZR', 'FABP4', 'FASLG', 'FASN', 'FBXW7', 'FCGR1B', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FIG4', 'FKBP1A', 'FLCN', 'FLT1', 'FLT3', 'FLT4', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXG1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FOXP3', 'FRK', 'FYN', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GCK', 'GDF10', 'GDF2', 'GFAP', 'GJA1', 'GLI1', 'GNA11', 'GNAQ', 'GNAS', 'GNRHR', 'GRASP', 'GRB2', 'GRPR', 'GSK3A', 'GSK3B', 'GSTP1', 'H1F0', 'H2AFX', 'HAVCR2', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HES1', 'HGF', 'HIF1A', 'HIST1H2BA', 'HK1', 'HK2', 'HMGA2', 'HNF4A', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA1A', 'HSPA1B', 'HSPA2', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'ID1', 'ID4', 'IDH1', 'IDH2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL17A', 'IL21', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INPP4A', 'INPP4B', 'INPP5A', 'INPP5B', 'INPP5D', 'INPP5E', 'INPP5F', 'INPP5J', 'INPP5K', 'INPPL1', 'INSRR', 'INSR', 'INS', 'IPMK', 'IPO11', 'IQGAP1', 'IRAK1', 'IRS1', 'IRS2', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'ITPR3', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUN', 'KAT2B', 'KDM5B', 'KDM5C', 'KDM6A', 'KDR', 'KEAP1', 'ATG13', 'KIF11', 'KLLN', 'KITLG', 'KIT', 'KLF17', 'KLF2', 'KLF4', 'KLK3', 'KPNA1', 'KPNA2', 'KPNA5', 'KPNA6', 'KPNA7', 'KRAS', 'KRT14', 'KRT5', 'KRT8', 'LASP1', 'LATS1', 'LATS2', 'LCK', 'LDHA', 'LEF1', 'LEP', 'LGALS3', 'LIG4', 'LOX', 'LRIG1', 'LRP1B', 'LRRK2', 'LYN', 'LYPD1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAN2C1', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K3', 'MAP2K4', 'MAP2K7', 'MAP3K1', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK4', 'MAPK6', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAP1', 'MAPT', 'MARCH2', 'MARCH3', 'MAST1', 'MAST2', 'MAST3', 'MAST4', 'MATK', 'MCL1', 'MCM2', 'MCM7', 'MCRS1', 'MDK', 'MDM2', 'MDM4', 'MECOM', 'MECP2', 'MED12', 'MEN1', 'MET', 'MGMT', 'MINPP1', 'MITF', 'MKI67', 'MKRN1', 'MLH1', 'MLH3', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT1', 'MLST8', 'MME', 'MMP2', 'MMP9', 'MOV10', 'MRAP', 'MRE11A', 'MSH2', 'MSH6', 'MTDH', 'MTMR2', 'MTOR', 'MTSS1', 'MUTYH', 'MVP', 'MYCN', 'MYC', 'MYLK', 'MYOCD', 'NANOG', 'NCKAP1', 'NCOA3', 'NCOR2', 'NDFIP1', 'NDFIP2', 'NDRG1', 'NDRG2', 'NEDD4L', 'NEDD4', 'NES', 'NF1', 'NF2', 'NFATC1', 'NFATC4', 'NFE2L2', 'NFKBIA', 'NGFR', 'NLGN3', 'NLGN4X', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR1H4', 'NR3C2', 'NRAS', 'NRP2', 'NTRK1', 'NTRK2', 'NUMB', 'OCRL', 'OLIG2', 'OTUD3', 'PALB2', 'PARD3', 'PARD6A', 'PARD6B', 'PARD6G', 'PARK2', 'PARK7', 'PARP1', 'PAX8', 'PBK', 'PBRM1', 'PCGF2', 'PCSK9', 'PDCD1', 'PDCD4', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PDK1', 'PDK2', 'PDPK1', 'PDZK1', 'PECAM1', 'PGM3', 'PGR', 'PHF6', 'PHLPP1', 'PHLPP2', 'PI3', 'PI4K2A', 'PI4K2B', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIK3R5', 'PIKFYVE', 'PINK1', 'PIP4K2A', 'PIP4K2B', 'PIP4K2C', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PIP5KL1', 'PKM', 'PLCB1', 'PLCB2', 'PLCB3', 'PLCB4', 'PLCD1', 'PLCD3', 'PLCD4', 'PLCE1', 'PLCG1', 'PLCG2', 'PLCH1', 'PLCH2', 'PLCZ1', 'PLEKHA1', 'PLEK', 'PLK1', 'PLK2', 'PLK3', 'BPIFA1', 'PMAIP1', 'PML', 'PMPCA', 'PMS1', 'PMS2', 'POLE', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPM1D', 'PPP2R1A', 'PPP2R4', 'PPP2R5A', 'PPP2R5E', 'PPP3CA', 'PPP6C', 'PRDX1', 'PREX2', 'PRKAA1', 'PRKAA2', 'PRKCI', 'PRKCZ', 'PRKDC', 'PRMT5', 'PROM1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTER', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPMT1', 'PTPN11', 'PTPN12', 'PTPN13', 'PTPN1', 'PTPRC', 'PTPRD', 'PTS', 'PXN', 'RAB7A', 'RAC1', 'RAC2', 'RAD51C', 'RAD51D', 'RAD51', 'RAD52', 'RAF1', 'RASA1', 'RASSF1', 'RB1CC1', 'RB1', 'RBL1', 'RBL2', 'RBM38', 'RBFOX2', 'RCN1', 'RECK', 'RELA', 'REL', 'REM1', 'RETN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'DROSHA', 'RNF146', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KB1', 'RPS6KB2', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'RRM1', 'RSL1D1', 'RUNX3', 'RWDD3', 'SACM1L', 'SALL4', 'SCAI', 'SCGB1D4', 'SCRIB', 'SDHB', 'SDHC', 'SERPINA1', 'SERPINA4', 'SERPINB5', 'SESN1', 'SESN2', 'SETD2', 'SGK1', 'SGK2', 'SGK3', 'SHANK2', 'SHARPIN', 'SHC1', 'SHFM1', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT5', 'SIRT6', 'SIRT7', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC2A4', 'SLC34A2', 'SLC9A3R1', 'SLC9A3R2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNCA', 'SNX27', 'SOCS1', 'SOCS3', 'SOD2', 'SOS1', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPOP', 'SPRY1', 'SPRY2', 'SRBD1', 'SRC', 'SREBF1', 'SRF', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STMN1', 'STUB1', 'STX16', 'SUCLG2', 'SUMO1', 'SYK', 'SYNJ1', 'SYNJ2', 'TACSTD2', 'TBX1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TEP1', 'TERT', 'TET1', 'TGFB1', 'TGFBR1', 'TGFBR2', 'TGM2', 'THBS1', 'TIMP1', 'TIMP3', 'TJP1', 'TLR4', 'TMEM55A', 'TMEM55B', 'TMPRSS2', 'TNFRSF10B', 'TNFSF10', 'TNF', 'TNKS2', 'TNKS', 'TNPO2', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TPM1', 'TRAF6', 'TRIM27', 'TRIM29', 'TSC1', 'TSC2', 'TTN', 'TUT1', 'TWIST1', 'TWSG1', 'TXN', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2E1', 'UBE2I', 'UBE2L3', 'UBE3A', 'ULK1', 'ULK2', 'USP10', 'USP13', 'USP18', 'USP28', 'USP7', 'USP8', 'UTF1', 'UVRAG', 'VCL', 'VDR', 'VEGFA', 'VHL', 'WDR18', 'WDTC1', 'WEE1', 'WIPI1', 'WIPI2', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT9A', 'WNT9B', 'WT1', 'WWP1', 'WWP2', 'XIAP', 'XPO1', 'XPO5', 'YAP1', 'YES1', 'YWHAB', 'YWHAZ', 'YY1', 'ZEB1', 'ZEB2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 0.685866280694916 Spearman Correlation: 0.6062660884339484 Coefficient of Determination: 0.4693653510876904 RMSE: 0.45635303113814735 NRMSE: 0.07135533283373424 MAPE: 507.1955858989301 Pearson Correlation: -0.09078844650488463 Spearman Correlation: 0.13227129338895052 Coefficient of Determination: -8.726648203346778e+23 RMSE: 463968463779.31946 NRMSE: 152912946997.33682 MAPE: 12503158469152.506 Predictor: ElasticNet Pearson Correlation: 0.5012703133210736 Spearman Correlation: 0.4599393791359706 Coefficient of Determination: 0.2076777900295671 RMSE: 0.5576401715527873 NRMSE: 0.08719258409081188 MAPE: 405.7776249046234 Pearson Correlation: 0.15885330598175437 Spearman Correlation: 0.20229733684518586 Coefficient of Determination: -0.008609063002039674 RMSE: 0.4987996741586812 NRMSE: 0.16439248373827736 MAPE: 195.04820828574415 Predictor: RandomForests Pearson Correlation: 0.46786178671241885 Spearman Correlation: 0.3970032719484643 Coefficient of Determination: 0.15716428037447594 RMSE: 0.575141364658391 NRMSE: 0.08992906960493957 MAPE: 383.19431127270224 Pearson Correlation: 0.07980443817265014 Spearman Correlation: 0.24538756640236817 Coefficient of Determination: -0.10481858741624372 RMSE: 0.5220477328725458 NRMSE: 0.17205448977409063 MAPE: 196.7943649339047 Protein: BRCA2 Protein Interaction Partners Count: 361 x_train_column_count: 351 x_train columns: ['ABL1', 'ACHE', 'ADRB1', 'ADRB2', 'AKT1', 'ALK', 'APEX1', 'ARID1A', 'ARPC1A', 'AR', 'ATAD5', 'ATM', 'ATRIP', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'B3GALTL', 'BACH1', 'BARD1', 'BCCIP', 'BCHE', 'BDNF', 'BECN1', 'BIRC5', 'BLM', 'BMI1', 'BRCA1', 'BRCC3', 'BRE', 'BRIP1', 'SLX4', 'BUB1B', 'BUB1', 'BUB3', 'SFR1', 'RHNO1', 'RMI2', 'BABAM1', 'MMS22L', 'CASC1', 'CASC5', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCNE1', 'CDC25A', 'CDC25C', 'CDC45', 'CDC6', 'CDH1', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CENPE', 'CENPF', 'CEP55', 'CHEK1', 'CHEK2', 'CHRNA1', 'CLSPN', 'CNTROB', 'CREM', 'CSMD3', 'CTNNB1', 'CYP19A1', 'DMC1', 'DNA2', 'DSN1', 'DYNC1LI2', 'EGFR', 'EGF', 'ELAC2', 'EME1', 'EME2', 'ENAM', 'EPCAM', 'ERBB2', 'ERBB3', 'ERCC1', 'ERCC2', 'ERCC4', 'ERCC5', 'ERCC6', 'ERCC8', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM175A', 'FANCA', 'FANCB', 'FANCC', 'FANCD2', 'FANCE', 'FANCF', 'FANCG', 'FANCI', 'FANCL', 'FANCM', 'FBN1', 'FBXO18', 'FBXW7', 'FEN1', 'FGFR2', 'FHIT', 'FLNA', 'FOXM1', 'GAPDH', 'GEN1', 'SLX1B', 'H2AFX', 'HELQ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HMG20A', 'HMG20B', 'HMMR', 'HNRNPC', 'HOXB13', 'HRAS', 'HUS1', 'ITPKB', 'KAT2B', 'KAT5', 'KEAP1', 'SPIDR', 'KIF23', 'KIF4A', 'KIT', 'KLK3', 'KRAS', 'KRT5', 'LIG1', 'LIG3', 'LIG4', 'LIMD1', 'LSP1', 'MAD2L2', 'MAGED1', 'MAMSTR', 'MAP2K2', 'MAP3K1', 'MCM10', 'MCPH1', 'MDC1', 'MDM2', 'MDM4', 'MEN1', 'MGMT', 'MKI67', 'MLH1', 'MLH3', 'KMT2C', 'MND1', 'MORF4L1', 'MRE11A', 'MRPL36', 'MSH2', 'MSH3', 'MSH4', 'MSH5', 'MSH6', 'MTA2', 'FAN1', 'MUC1', 'MUS81', 'MUTYH', 'MYC', 'NBN', 'NCAPG', 'NEDD4', 'NF1', 'NHEJ1', 'NNT', 'NOTCH1', 'NSL1', 'NSMCE4A', 'OBFC1', 'OGG1', 'PALB2', 'PARG', 'PARP1', 'PARP2', 'PARP3', 'PAXIP1', 'PCNA', 'PDLIM7', 'PDS5A', 'PDS5B', 'PGR', 'PIK3CA', 'PLCB4', 'PLEC', 'PLEKHH1', 'PLK1', 'PMS1', 'PMS2', 'PNOC', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'POLN', 'POLQ', 'PRDM9', 'PRKDC', 'PRSS1', 'PSMC3IP', 'PSMD3', 'PSMD6', 'PTEN', 'RAD17', 'RAD18', 'RAD1', 'RAD21', 'RAD23B', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD52', 'RAD54B', 'RAD54L', 'RAD9A', 'RAD9B', 'RAG2', 'RASSF1', 'RBBP8', 'RBMX', 'RECQL4', 'RECQL5', 'RECQL', 'RET', 'REV1', 'REV3L', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RNF168', 'RNF8', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SKP2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCAL1', 'SMARCB1', 'SMC1A', 'SMC2', 'SMC3', 'SMC4', 'SMC5', 'SMC6', 'SMUG1', 'SNAI2', 'SP1', 'SPO11', 'STAT5A', 'STK11', 'STRA13', 'SUV39H1', 'SYCP3', 'TBCE', 'TDP1', 'TERT', 'TEX15', 'TMPRSS2', 'TNS1', 'TOP1', 'TOP2A', 'TOP3A', 'TOP3B', 'TOPBP1', 'TOX3', 'TP53BP1', 'TP53', 'TPX2', 'TRIP12', 'PRSS58', 'TTK', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2D1', 'UBE2E2', 'UBE2E3', 'UBE2N', 'UBE2T', 'UIMC1', 'USF1', 'USP11', 'USP15', 'USP1', 'USP21', 'USP4', 'UVRAG', 'VEGFA', 'VWF', 'WDR48', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WTIP', 'XPA', 'XPO1', 'XRCC1', 'XRCC2', 'XRCC3', 'XRCC4', 'XRCC5', 'XRCC6', 'ZFYVE26', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.2930512194475207 Spearman Correlation: 0.2745335350954453 Coefficient of Determination: -0.49186040754675076 RMSE: 0.24136578626322397 NRMSE: 0.15613689872512646 MAPE: 504.33228142128763 Pearson Correlation: 0.08157662994211856 Spearman Correlation: 0.2507648385089601 Coefficient of Determination: -4.1084172958093615e+24 RMSE: 374442965558.2792 NRMSE: 374742759766.0921 MAPE: 18216561713706.55 Predictor: ElasticNet Pearson Correlation: 0.23002930250656076 Spearman Correlation: 0.23742575175619524 Coefficient of Determination: 0.034864823935199185 RMSE: 0.1941358254825259 NRMSE: 0.12558435141767424 MAPE: 157.1196233428345 Pearson Correlation: 0.22524323410771632 Spearman Correlation: 0.1893143742003078 Coefficient of Determination: 0.031246649641360147 RMSE: 0.18182559209378837 NRMSE: 0.18197116902901161 MAPE: 125.83599254676142 Predictor: RandomForests Pearson Correlation: 0.3084446858799865 Spearman Correlation: 0.2990494718950437 Coefficient of Determination: 0.08031821392346616 RMSE: 0.18950924754063983 NRMSE: 0.12259146852925869 MAPE: 169.0447742532589 Pearson Correlation: 0.27759433418850976 Spearman Correlation: 0.23880145652069415 Coefficient of Determination: 0.06470018389992449 RMSE: 0.17865855875858774 NRMSE: 0.17880160003861867 MAPE: 142.88633908888042 Protein: CDKN2A Protein Interaction Partners Count: 612 x_train_column_count: 604 x_train columns: ['ABCC1', 'ABL1', 'ACAP1', 'ACAP2', 'ACP5', 'ACTA1', 'ACTB', 'ACTG1', 'ADAMTS9', 'ADAP1', 'AFP', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD12', 'ANXA5', 'AP3D1', 'AP3S1', 'AP3S2', 'APAF1', 'APBA1', 'APBA2', 'ARAP1', 'ARAP2', 'ARF1', 'ARF3', 'ARF4', 'ARF5', 'ARF6', 'ARFGAP1', 'ARFGAP3', 'ARFIP2', 'ARFRP1', 'ARID1A', 'ARID2', 'ARID5B', 'ARL10', 'ARL1', 'ARL2', 'ARL3', 'ARL4A', 'ARL5A', 'AR', 'ASAP1', 'ATM', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'AXIN1', 'BAP1', 'BCL2L11', 'BCL2L1', 'BCL6', 'BECN1', 'BIRC5', 'BMI1', 'BRAF', 'BRCA1', 'BRCA2', 'BUB1B', 'RGCC', 'C1QBP', 'RABL6', 'CACNA1G', 'CADM1', 'CAMK1D', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNL1', 'CD274', 'CD34', 'CD44', 'CDC123', 'CDC20', 'CDC25A', 'CDC25C', 'CDC42', 'CDC45', 'CDC5L', 'CDC6', 'CDC7', 'CDH13', 'CDH17', 'CDH1', 'CDH2', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5RAP3', 'CDK6', 'CDK7', 'CDKAL1', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDX2', 'CEACAM5', 'CEBPB', 'CEBPE', 'CHEK1', 'CHEK2', 'CHFR', 'CHKA', 'COMMD1', 'CRABP1', 'CREBBP', 'CSF1R', 'CSF1', 'CSF2', 'CTBP1', 'CTBP2', 'CTCF', 'CTLA4', 'CTNNB1', 'CTSK', 'CUL1', 'CUL3', 'CXCR4', 'CYCS', 'CYLD', 'CYTH1', 'CYTH2', 'CYTH3', 'DAB2IP', 'DAP', 'DAXX', 'DICER1', 'DIRAS3', 'DLEC1', 'DMTF1', 'DNAH3', 'DNMT1', 'DNMT3A', 'DNMT3B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EBF1', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EP300', 'EPCAM', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ETS1', 'ETV6', 'EWSR1', 'EZH1', 'EZH2', 'FAT1', 'FBXW7', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FKBP2', 'FLT3', 'FMN2', 'FN1', 'FOS', 'FOXA1', 'FOXM1', 'FOXN2', 'FOXO1', 'FOXO3', 'FTO', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GATA4', 'GATA5', 'GBF1', 'GDF15', 'GGA1', 'GGA2', 'GGA3', 'GIT1', 'GIT2', 'GLI1', 'GLTSCR2', 'GMNN', 'GNA11', 'GNAQ', 'GNAS', 'GNL3', 'GOLPH3', 'GP5', 'GSPT1', 'GSTP1', 'H2AFX', 'H2AFZ', 'H3F3A', 'H3F3B', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC9', 'HELLS', 'HGF', 'HHEX', 'HIC1', 'HIF1A', 'HIST1H2BA', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AA3', 'HIST2H2AC', 'HIST2H4A', 'HIST4H4', 'HLTF', 'HMGA2', 'HNF4A', 'HNRNPD', 'HOPX', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA4', 'HSPA9', 'HUWE1', 'ID1', 'IDH1', 'IDH2', 'IGF1R', 'IGF1', 'IGF2BP2', 'IGF2R', 'IGF2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING4', 'INS', 'IQSEC1', 'IRS1', 'ISOC2', 'ITGAM', 'JAK1', 'JAK2', 'JAK3', 'JAZF1', 'JUNB', 'JUN', 'KAT2B', 'KAT5', 'KCNJ11', 'KCNQ1', 'KDM1A', 'KDM2B', 'KDM6A', 'KDM6B', 'KDR', 'KEAP1', 'KIAA1549', 'KIT', 'KLF4', 'KRAS', 'KRT19', 'KRT20', 'KRT5', 'KRT7', 'LATS2', 'LOX', 'LRRK2', 'MACROD2', 'MAF', 'MAP2K1', 'MAP2K4', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MAX', 'MC1R', 'MCL1', 'MCM10', 'MCM2', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEN1', 'MEOX1', 'MEOX2', 'MET', 'MGMT', 'MITF', 'MKRN1', 'MLANA', 'MLH1', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT3', 'MME', 'MMP2', 'MMP7', 'MMP9', 'MOV10', 'MRAS', 'MSH2', 'MSH6', 'MTA1', 'MTAP', 'MTHFR', 'MTNR1B', 'MTOR', 'MUC1', 'MYBL2', 'MYCL', 'MYCN', 'MYC', 'MYOD1', 'KAT6A', 'NANOG', 'NCAM1', 'NCL', 'NCOR1', 'NES', 'NEUROG1', 'NF1', 'NF2', 'NFATC1', 'NFE2L2', 'NME1', 'NOTCH1', 'NOTCH2', 'NPM1', 'NRAS', 'NSUN2', 'ORC4', 'ORC5', 'OSBP2', 'P2RY8', 'PA2G4', 'PALB2', 'PARP1', 'PAX3', 'PAX5', 'PAX8', 'PBRM1', 'PCGF2', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PEX19', 'PGR', 'PHLDB1', 'PI3', 'PIAS2', 'PIGF', 'PIK3CA', 'PIK3R1', 'PIP4K2A', 'PLEKHA3', 'PLEKHA8', 'PLEK', 'PLK1', 'PMAIP1', 'PML', 'PMS2', 'POTEF', 'POU5F1', 'PPARA', 'PPARG', 'PPM1D', 'PPP1R9B', 'PPP3CA', 'PRDM2', 'PRMT6', 'PROM1', 'PRSS1', 'PSMC3', 'PSMD10', 'PSME3', 'PTCH1', 'PTEN', 'PTER', 'PTF1A', 'PTGS2', 'PTPN11', 'PTPRC', 'PTPRD', 'PXN', 'RAB11A', 'RAB5A', 'RABEP1', 'RABGEF1', 'RAC2', 'RAD51', 'RAF1', 'RAP2B', 'RARB', 'RASSF1', 'RASSF2', 'RB1', 'RBL1', 'RBL2', 'RCC1', 'RELA', 'RELB', 'REL', 'RET', 'RHOA', 'DROSHA', 'RNF2', 'RNF43', 'ROS1', 'RPL11', 'RPRM', 'RPS27A', 'RPS6KB1', 'RRAS2', 'RRAS', 'RTEL1', 'RUNX2', 'RUNX3', 'SDHC', 'SENP1', 'SENP3', 'SERPINE1', 'SERTAD1', 'SETD2', 'SFN', 'SFRP1', 'SFRP2', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SIX2', 'SKP2', 'SLC30A8', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SNAI1', 'SNAI2', 'SNCA', 'SOCS1', 'SOX2', 'SP1', 'SPEN', 'SRC', 'STAT1', 'STAT3', 'STK11', 'STK25', 'STK33', 'STMN1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUV39H1', 'SUZ12', 'SYNE1', 'SYP', 'TBL1XR1', 'TBRG1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TERT', 'TET2', 'TFDP1', 'TFPI2', 'TGFBR2', 'THADA', 'THBS1', 'TIMP3', 'TMCO1', 'TMEM115', 'TNFRSF10B', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TRADD', 'TRIM28', 'TRIP12', 'PRSS58', 'TSC2', 'TSPAN8', 'TTF1', 'TWIST1', 'TWSG1', 'TYR', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2I', 'UBE3A', 'UCHL1', 'USP7', 'UTF1', 'VEGFA', 'VHL', 'WDTC1', 'WEE1', 'WFS1', 'WHSC1', 'WIF1', 'WRN', 'WT1', 'WWOX', 'XRCC1', 'YY1', 'ZBTB17', 'ZBTB7A', 'ZEB1', 'ZFP91', 'ZNF148', 'ZNF217', 'ZNF227', 'ZNF410', 'ZNF420', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 0.6521867459066492 Spearman Correlation: 0.5842031602240574 Coefficient of Determination: 0.39976998998006263 RMSE: 0.4979401099164779 NRMSE: 0.1125669967031712 MAPE: 218.94934383938636 Pearson Correlation: -0.07782575197930411 Spearman Correlation: 0.18167670503453118 Coefficient of Determination: -1.0261877285980332e+25 RMSE: 2392519356168.0015 NRMSE: 646102985732.6497 MAPE: 33330603675648.918 Predictor: ElasticNet Pearson Correlation: 0.48167347229149476 Spearman Correlation: 0.40133182558675895 Coefficient of Determination: 0.20626132184930102 RMSE: 0.5726074972159944 NRMSE: 0.1294467044684061 MAPE: 172.85037668070632 Pearson Correlation: 0.49486306450755546 Spearman Correlation: 0.42432445615061953 Coefficient of Determination: 0.2009152175732699 RMSE: 0.6676340555438605 NRMSE: 0.18029545113255752 MAPE: 463.80139925153696 Predictor: RandomForests Pearson Correlation: 0.4517310253904703 Spearman Correlation: 0.36845208302158833 Coefficient of Determination: 0.17422162499370308 RMSE: 0.5840499768007706 NRMSE: 0.1320334524247249 MAPE: 215.6875338914127 Pearson Correlation: 0.4872235485791677 Spearman Correlation: 0.3979020692503308 Coefficient of Determination: 0.16437735441810664 RMSE: 0.6827271158167552 NRMSE: 0.1843713518273711 MAPE: 365.41219514877343 Protein: TP53 Protein Interaction Partners Count: 1000 x_train_column_count: 990 x_train columns: ['ABCB1', 'ABCC1', 'ABL1', 'ACTB', 'ACTL6A', 'ADAM17', 'AFP', 'AGT', 'AICDA', 'AIFM2', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD2', 'ANXA1', 'ANXA2', 'ANXA5', 'APAF1', 'APBB1', 'APC', 'APEX1', 'APOBEC3B', 'APP', 'ARID1A', 'ARID3A', 'AR', 'ASF1A', 'ASXL1', 'ATF2', 'ATF3', 'ATG7', 'ATM', 'ATN1', 'ATRIP', 'ATRX', 'ATR', 'ATXN3', 'AURKA', 'AURKB', 'AXIN1', 'AXL', 'BACE1', 'BAG1', 'BAG2', 'BAIAP2L1', 'BAK1', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2A1', 'BCL2L11', 'BCL2L12', 'BCL2L14', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BID', 'BIRC3', 'BIRC5', 'BIRC6', 'BLM', 'BMF', 'BMI1', 'BMX', 'BNIP3L', 'BNIP3', 'BRCA1', 'BRCA2', 'BRCC3', 'BRD1', 'BRD4', 'BRD7', 'BRE', 'BRIP1', 'BRPF1', 'BRPF3', 'BTG2', 'BTK', 'BUB1B', 'BUB1', 'RHNO1', 'RGCC', 'RMI2', 'CNOT11', 'SETD9', 'CA9', 'CABIN1', 'CABLES1', 'CAPN1', 'CARM1', 'CASP10', 'CASP1', 'CASP2', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBX2', 'CBX4', 'CBX6', 'CBX8', 'CCDC106', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNG2', 'CCNH', 'CCNK', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CD24', 'CD274', 'CD34', 'CD40LG', 'CD40', 'CD44', 'CD82', 'CDC20', 'CDC25A', 'CDC25C', 'CDH17', 'CDH1', 'CDK12', 'CDK13', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CEACAM5', 'CEBPB', 'CENPJ', 'CFL1', 'CFLAR', 'CHD3', 'CHD4', 'CHD8', 'CHEK1', 'CHEK2', 'CHUK', 'CISH', 'CITED2', 'CLSPN', 'CLU', 'CNOT10', 'CNOT1', 'CNOT2', 'CNOT3', 'CNOT4', 'CNOT6L', 'CNOT6', 'CNOT7', 'CNOT8', 'COPS5', 'CREB1', 'CREBBP', 'CRYAB', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK1G1', 'CSNK1G2', 'CSNK1G3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTCF', 'CTGF', 'CTNNB1', 'CUL4A', 'CUL7', 'CUL9', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP1A1', 'DACH1', 'DAPK1', 'DAP', 'DAXX', 'DDB1', 'DDB2', 'DDIT4', 'DDX17', 'DDX3X', 'DDX5', 'DECR1', 'DGCR8', 'DHCR24', 'DHFR', 'DIABLO', 'DICER1', 'DKK1', 'DMTF1', 'DNA2', 'DNAJA3', 'DNAJB1', 'DNMT1', 'DNMT3A', 'DNTT', 'DPYD', 'DRAM1', 'DTL', 'DUSP1', 'DUSP2', 'DYRK1A', 'DYRK2', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EEF1A1', 'EEF1A2', 'EGFR', 'EGF', 'EGR1', 'EHMT1', 'EHMT2', 'EI24', 'EIF2AK2', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4EBP1', 'ELANE', 'ELAVL1', 'ELL3', 'ELL', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHA3', 'EPHB2', 'ERBB2', 'ERBB4', 'ERCC1', 'ERCC2', 'ERCC3', 'ERCC6', 'ESR1', 'ETS1', 'ETS2', 'EWSR1', 'EXO1', 'EZH2', 'F2', 'FADD', 'AMER1', 'FAM175B', 'FANCC', 'FANCD2', 'FASLG', 'FAS', 'FBL', 'FBXO11', 'FBXO4', 'FBXW7', 'FGF1', 'FGF2', 'FGFR3', 'FHIT', 'FHL2', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FSCN1', 'FUT4', 'FZR1', 'G3BP1', 'G6PD', 'GADD45A', 'GADD45B', 'GADD45G', 'GAPDH', 'GATAD2A', 'GATAD2B', 'GDF15', 'GFI1', 'GLS2', 'GLTSCR2', 'GNL3', 'GRAMD4', 'GRB10', 'GRB14', 'GSK3B', 'GSTP1', 'GTF2H1', 'GTSE1', 'H1F0', 'H2AFX', 'HAMP', 'HCK', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC5', 'HDAC7', 'HDAC8', 'HDAC9', 'HERC5', 'HIC1', 'HIF1A', 'HIPK1', 'HIPK2', 'HIPK3', 'HIPK4', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HK2', 'HMGA1', 'HMGA2', 'HMGB1', 'HMGB2', 'HMMR', 'HMOX1', 'HNF4A', 'HNRNPK', 'HNRNPL', 'HOXA5', 'HPGDS', 'HRAS', 'HSF1', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA1A', 'HSPA1B', 'HSPA1L', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'HSPB1', 'HSPB2', 'HTT', 'HUS1', 'HUWE1', 'ICAM1', 'ID2', 'ID4', 'IDH1', 'IDH2', 'IFI16', 'IFNAR1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IGFBP7', 'IKBKB', 'IL17A', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING2', 'ING3', 'ING4', 'ING5', 'INSIG1', 'INS', 'IRF1', 'ISG15', 'ITPKB', 'JAG1', 'JAK2', 'JMY', 'JUN', 'KAT2A', 'KAT2B', 'KAT5', 'KDM1A', 'KDM6A', 'KDM6B', 'KDR', 'KHDRBS1', 'CCAR2', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KPNA2', 'KRAS', 'KRT14', 'KRT17', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'L3MBTL1', 'LAMA4', 'LEP', 'LGALS7B', 'LGALS7', 'LIF', 'LIG4', 'LIN28A', 'PIDD1', 'LRRK2', 'LYN', 'MAF1', 'MAF', 'MAGEA2', 'MAP1LC3B', 'MAP2K1', 'MAP2K3', 'MAP2K7', 'MAP3K1', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MBD3', 'MCL1', 'MCM7', 'MDC1', 'MDH1', 'MDM2', 'MDM4', 'MEAF6', 'MECOM', 'MELK', 'MET', 'MGMT', 'MIF', 'MKI67', 'MKRN1', 'MLH1', 'KMT2D', 'KMT2C', 'MMP13', 'MMP1', 'MMP2', 'MMP9', 'MOV10', 'MRE11A', 'MSH2', 'MSH6', 'MSX1', 'MT1A', 'MT2A', 'MTA1', 'MTA2', 'MTA3', 'MTOR', 'MUC1', 'MUTYH', 'MYBBP1A', 'MYB', 'MYCN', 'MYC', 'MYOCD', 'KAT8', 'KAT6A', 'NANOG', 'NBN', 'NCL', 'NCOA3', 'NCOR1', 'NCOR2', 'NDN', 'NDRG1', 'NEDD8', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFE2L2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NFKBIB', 'NFYA', 'NFYB', 'NFYC', 'NGFR', 'NLK', 'NLRC4', 'NME1', 'NOC2L', 'NOS3', 'NOTCH1', 'NOTCH3', 'NOTCH4', 'NOX4', 'NPM1', 'NQO1', 'NR1I2', 'NR2E1', 'NR3C1', 'NR4A1', 'NR4A2', 'NRAS', 'NUAK1', 'NUMB', 'NUPR1', 'OGG1', 'OLIG2', 'OPN1SW', 'OSGIN1', 'OTUB1', 'OTUB2', 'OTUD5', 'PADI4', 'PALB2', 'PARK2', 'PARK7', 'PARP1', 'PATZ1', 'PAX2', 'PAX3', 'PAX8', 'PBK', 'PBRM1', 'PCBP4', 'PCNA', 'PDCD4', 'PDCD5', 'PDGFRA', 'PDGFRB', 'PDLIM7', 'PER2', 'PERP', 'PGR', 'PHB', 'PHC1', 'PHC2', 'PHC3', 'PHF20', 'PHGDH', 'PI3', 'PIAS1', 'PIAS2', 'PIAS4', 'PIK3CA', 'PIN1', 'PKM', 'PLAGL1', 'PLAU', 'PLK1', 'PLK2', 'PLK3', 'PLK4', 'PMAIP1', 'PML', 'PMS2', 'POLI', 'POLK', 'POU4F1', 'POU4F2', 'POU5F1', 'PPARGC1A', 'PPARG', 'PPIF', 'PPM1D', 'PPP1R13B', 'PPP1R13L', 'PPP1R15A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R4', 'PPP2R5C', 'PRDM1', 'PRDM2', 'PRDX1', 'PRELID1', 'PRIMA1', 'PRKAA1', 'PRKAA2', 'PRKAB1', 'PRKAB2', 'PRKAG1', 'PRKAG2', 'PRKAG3', 'PRKCA', 'PRKCD', 'PRKCZ', 'PRKD1', 'PRKDC', 'PRKG1', 'PRMT1', 'PRMT5', 'PROM1', 'PSEN1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTBP1', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2', 'PTTG1', 'RABGGTA', 'RABGGTB', 'RAD17', 'RAD1', 'RAD50', 'RAD51', 'RAD9A', 'RAD9B', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP4', 'RBBP6', 'RBBP7', 'RBBP8', 'RBL1', 'RBL2', 'RBM38', 'RBPJ', 'RCHY1', 'RCOR1', 'RECQL4', 'RELA', 'REM1', 'REST', 'RET', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RFFL', 'RFWD2', 'RING1', 'RMI1', 'DROSHA', 'RNF20', 'RNF2', 'RNF34', 'RNF43', 'ROCK1', 'RPA1', 'RPA2', 'RPA3', 'RPL11', 'RPL22', 'RPL26', 'RPL5', 'RPRM', 'RPS14', 'RPS19', 'RPS27A', 'RPS27L', 'RPS3', 'RPS6KB1', 'RQCD1', 'RRAD', 'RRM2B', 'RRM2', 'RUNX2', 'RUNX3', 'S100A2', 'S100A4', 'S100A6', 'S100B', 'SALL4', 'SCO2', 'SDHC', 'SENP1', 'SENP3', 'SERPINB5', 'SERPINE1', 'SESN1', 'SESN2', 'SESN3', 'SETD2', 'SETD7', 'SETD8', 'SETDB1', 'SFN', 'SRSF1', 'SGK1', 'SHFM1', 'SHH', 'SHISA5', 'SIK1', 'SIN3A', 'SIN3B', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SKP2', 'SLC2A14', 'SLC2A1', 'SLC2A2', 'SLC2A3', 'SLC6A6', 'SLMO1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMG1', 'SMG7', 'SMYD2', 'SNAI1', 'SNAI2', 'SOCS1', 'SOCS3', 'SOD2', 'SORT1', 'SOX2', 'SOX4', 'SP100', 'SP1', 'SP3', 'SP7', 'SPATA18', 'SPP1', 'SQSTM1', 'SRC', 'SREBF1', 'SREBF2', 'SSRP1', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STEAP3', 'STK11', 'STMN1', 'STUB1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUMO4', 'SUPT16H', 'SUV39H1', 'SUZ12', 'SYK', 'SYP', 'TADA3', 'TAF10', 'TAF11', 'TAF12', 'TAF13', 'TAF15', 'TAF1L', 'TAF1', 'TAF2', 'TAF3', 'TAF4B', 'TAF4', 'TAF5', 'TAF6', 'TAF7L', 'TAF7', 'TAF9B', 'TBPL1', 'TBPL2', 'TBP', 'TCHP', 'TCP1', 'TDG', 'TERT', 'TET2', 'TFAM', 'TFAP2A', 'TFAP2C', 'TFDP1', 'TFF1', 'TGFB1', 'TGM2', 'THBS1', 'TIMP3', 'TLR3', 'TLR9', 'TMEM219', 'TNFAIP3', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF10C', 'TNFRSF10D', 'TNF', 'TNK2', 'TNKS1BP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOE1', 'TOP1', 'TOP2A', 'TOP3A', 'TOPBP1', 'TOPORS', 'TP53AIP1', 'TP53BP1', 'TP53BP2', 'TP53I3', 'TP53INP1', 'TP53RK', 'TP63', 'TP73', 'TPT1', 'TPX2', 'TRAF6', 'TRIAP1', 'TRIM24', 'TRIM28', 'TRIM29', 'TRIM32', 'TRIM59', 'TRIM8', 'TRRAP', 'TSC2', 'TTC5', 'TTK', 'TWIST1', 'TWIST2', 'TXN', 'TYMS', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2D1', 'UBE2E1', 'UBE2I', 'UBE2K', 'UBE2N', 'UBE2Q1', 'UBE2S', 'UBE3A', 'UBN1', 'UCHL1', 'UHRF1', 'USF1', 'USP10', 'USP15', 'USP24', 'USP3', 'USP42', 'USP7', 'UTP14A', 'VEGFA', 'VHL', 'VPRBP', 'VRK1', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WWOX', 'XAF1', 'XIAP', 'XPA', 'XPO1', 'XRCC1', 'XRCC5', 'XRCC6', 'YBX1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'YY1', 'YY2', 'ZBTB33', 'ZBTB7A', 'ZEB1', 'ZEB2', 'ZKSCAN4', 'ZNF148', 'ZNF274', 'ZNF385A', 'ZNF420', 'ZNF668', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.6352811785715624 Spearman Correlation: 0.5467602990593808 Coefficient of Determination: 0.38755809093483695 RMSE: 0.35437056332987327 NRMSE: 0.08516475927177922 MAPE: 1198.7601072160573 Pearson Correlation: 0.07866416342210118 Spearman Correlation: 0.35218621175952963 Coefficient of Determination: -2.465378169488914e+24 RMSE: 660465065316.7404 NRMSE: 237500472982.39432 MAPE: 59555290442299.586 Predictor: ElasticNet Pearson Correlation: 0.49176636633622245 Spearman Correlation: 0.4581643317775158 Coefficient of Determination: 0.22165305108154076 RMSE: 0.3994954173512051 NRMSE: 0.096009473047634 MAPE: 752.5057839075049 Pearson Correlation: 0.5329484365043519 Spearman Correlation: 0.5422934347868501 Coefficient of Determination: 0.2656040526156229 RMSE: 0.3604733924478584 NRMSE: 0.12962472309247308 MAPE: 377.95384349424904 Predictor: RandomForests Pearson Correlation: 0.4640705518245935 Spearman Correlation: 0.4476783840101457 Coefficient of Determination: 0.20602745452825877 RMSE: 0.4034854987850098 NRMSE: 0.09696839672795238 MAPE: 672.3064308283045 Pearson Correlation: 0.49805860374656846 Spearman Correlation: 0.5244757012211014 Coefficient of Determination: 0.23490878633324708 RMSE: 0.3679295634820395 NRMSE: 0.13230593098710472 MAPE: 830.3357024280638 Protein: CTNNB1 Protein Interaction Partners Count: 992 x_train_column_count: 983 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACAN', 'ACP1', 'ACTA1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTN4', 'ACVR1B', 'ACVR1', 'ADAM10', 'ADCY7', 'ADIPOQ', 'AES', 'AFP', 'AHI1', 'AHR', 'AHSA1', 'AJAP1', 'AK9', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'ALPL', 'AMHR2', 'AMH', 'ANXA5', 'AP1M1', 'APC2', 'APCS', 'APC', 'APH1A', 'APH1B', 'AQP1', 'ARHGAP10', 'ARHGAP21', 'ARHGAP32', 'ARHGEF4', 'ARID1A', 'ARID2', 'ARMC7', 'ARMC8', 'ARVCF', 'ARX', 'AR', 'ASCL1', 'ASF1A', 'ASH2L', 'ASIP', 'ATF4', 'ATM', 'AURKA', 'AXIN1', 'AXIN2', 'BAG3', 'BCAR1', 'BCL2L1', 'BCL3', 'BCL6', 'BCL9L', 'BCL9', 'BDNF', 'BGLAP', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BMPR1B', 'BNIP2', 'BRAF', 'BRCA1', 'BRCA2', 'BRMS1L', 'BTRC', 'HILPDA', 'AK8', 'CA2', 'CA9', 'CABLES1', 'CACYBP', 'CALM1', 'CALM3', 'CARM1', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBLL1', 'CBL', 'CBY1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CD24', 'CD34', 'CD40', 'CD44', 'CDC27', 'CDC42', 'CDC73', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH16', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH26', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDHR5', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK8', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDON', 'CDX1', 'CDX2', 'CEBPA', 'CHD8', 'CHRD', 'CHUK', 'CITED1', 'CKAP5', 'CLCA1', 'CLDN3', 'CLDN5', 'COL1A1', 'COPS3', 'COPS5', 'COPS6', 'CREB1', 'CREBBP', 'CRKL', 'CRK', 'CRP', 'CRYAB', 'CSNK1A1L', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK2A3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNAL1', 'CTNNBIP1', 'CTNND1', 'CTNND2', 'CTTN', 'CUL1', 'CUL4A', 'CUL4B', 'CXCR4', 'CXXC4', 'DAB2', 'DACT1', 'DACT2', 'DACT3', 'DCT', 'DCX', 'DDB1', 'DDX39A', 'DDX3X', 'DDX5', 'DHODH', 'DHX9', 'DKK1', 'DKK2', 'DKK3', 'DKK4', 'DLG1', 'DLG2', 'DLG4', 'DLG5', 'DLGAP1', 'DLL4', 'DLX1', 'DNM2', 'DNMT1', 'DPYD', 'DSC1', 'DSC2', 'DSC3', 'DSG1', 'DSG2', 'DSG3', 'DSG4', 'DSP', 'DUSP6', 'DVL1', 'DVL2', 'DVL3', 'E2F3', 'ECM1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'ELAVL1', 'EMD', 'ENAH', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHB2', 'EPHB3', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EXOC3', 'EXOC4', 'EYA4', 'EZH2', 'EZR', 'F2RL2', 'FAF1', 'AMER1', 'FANCA', 'FASLG', 'FAS', 'FAT1', 'FAT4', 'FBXW11', 'FBXW7', 'FERMT2', 'FER', 'FGF10', 'FGF13', 'FGF2', 'FGF3', 'FGF4', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FLT3', 'FMN1', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC2', 'FOXG1', 'FOXL1', 'FOXL2', 'FOXM1', 'FOXN3', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FRAT1', 'FRAT2', 'FRZB', 'FSCN1', 'FSTL1', 'FSTL3', 'FURIN', 'FUS', 'FXR1', 'FYN', 'FZD10', 'FZD1', 'FZD2', 'FZD3', 'FZD4', 'FZD5', 'FZD6', 'FZD7', 'FZD8', 'FZD9', 'GAPDH', 'GATA2', 'GATA4', 'GCG', 'GDF2', 'GDNF', 'GFRA1', 'GJA1', 'GLI1', 'GLI2', 'GLI3', 'GLIS2', 'GLUL', 'GNA11', 'GNA12', 'GNA13', 'GNAQ', 'GNAS', 'GPC3', 'GRIA2', 'GRIP1', 'GSK3A', 'GSK3B', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HAS2', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC7', 'HERC5', 'HES7', 'HGF', 'HGS', 'HHEX', 'HIC1', 'HIF1A', 'HINT1', 'HIPK2', 'HIST1H1C', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HMGB1', 'HNF1A', 'HNF4A', 'HNRNPA1', 'HNRNPA2B1', 'HNRNPK', 'HNRNPM', 'HOXA10', 'HOXB4', 'HPGD', 'HRAS', 'HSP90AB1', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPD1', 'HTRA1', 'HTT', 'HUWE1', 'IBSP', 'IDH1', 'IDH2', 'IFNB1', 'IFRD1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP4', 'IHH', 'IKBKB', 'IL6', 'CXCL8', 'ILK', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IRF3', 'ISG15', 'ISL1', 'ITGAE', 'ITGB1', 'ITGB7', 'ITK', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'AJUBA', 'JUN', 'JUP', 'KANK1', 'KAT2A', 'KAT2B', 'KAT5', 'KCNN1', 'KCTD1', 'KDM1A', 'KDR', 'KIF18B', 'KIF3A', 'KIF5B', 'KIFC3', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KRAS', 'KREMEN1', 'KRIT1', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LATS2', 'LDB1', 'LDHB', 'LDLR', 'LEF1', 'LEO1', 'LGR4', 'LGR5', 'LGR6', 'LHCGR', 'LHX8', 'LIF', 'LIMA1', 'LMNA', 'LMNB1', 'LOX', 'LRP4', 'LRP5L', 'LRP5', 'LRP6', 'LRRFIP1', 'LRRK2', 'LZTFL1', 'MACF1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8IP1', 'MAPK8', 'MAPK9', 'MDFIC', 'MDFI', 'MDK', 'MDM2', 'MED12', 'MED1', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'KMT2D', 'MLLT10', 'MLLT11', 'MLLT4', 'MLLT6', 'KMT2A', 'MME', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP25', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MRAP', 'MSH2', 'MSH6', 'MSN', 'MSX1', 'MSX2', 'MTDH', 'MTOR', 'MUC13', 'MUC1', 'MUTYH', 'MYCN', 'MYC', 'MYF5', 'MYO1D', 'MYO6', 'MYO7A', 'MYOD1', 'MYOG', 'NANOG', 'NCAM1', 'NCCRP1', 'NCOA2', 'NCSTN', 'NDP', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEURL2', 'NF1', 'NF2', 'NFAT5', 'NFKB1', 'NIT1', 'NKD1', 'NLK', 'NME1', 'NOG', 'NONO', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR0B1', 'NR4A1', 'NR4A2', 'NR5A1', 'NR5A2', 'NRAS', 'NRIP1', 'NTRK1', 'NTRK2', 'NTRK3', 'NUDT5', 'NUMB', 'NUP153', 'NUTF2', 'OTX2', 'PAK1', 'PAK2', 'PAK3', 'PANK4', 'PARD3', 'PARD6A', 'PARK2', 'PARP1', 'PAX3', 'PAX6', 'PAX7', 'PAX8', 'PDGFRA', 'PDGFRB', 'PECAM1', 'PGK1', 'PGR', 'PHB', 'JADE1', 'PI3', 'PICK1', 'PIK3CA', 'PIK3R1', 'PIK3R2', 'PIN1', 'PIP5K1A', 'PIP5K1C', 'PITX2', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAG1', 'PLEKHA7', 'PLK1', 'PML', 'PMS2', 'POLE', 'PORCN', 'POTEF', 'POU5F1', 'PPARD', 'PPARG', 'PPM1A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R2B', 'PPP2R5A', 'PPP2R5B', 'PPP2R5C', 'PPP2R5D', 'PPP2R5E', 'PRKACA', 'PRKACB', 'PRKACG', 'PRKAR1A', 'PRKCA', 'PRKCG', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRL', 'PRMT1', 'PROC', 'PROM1', 'PROP1', 'PSEN1', 'PSEN2', 'PSENEN', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTEN', 'PTGES3', 'PTGS2', 'PTH1R', 'PTH', 'PTK2', 'PTK7', 'PTMA', 'PTN', 'PTPN11', 'PTPN13', 'PTPN1', 'PTPN6', 'PTPRB', 'PTPRC', 'PTPRF', 'PTPRG', 'PTPRJ', 'PTPRK', 'PTPRM', 'PTPRU', 'PTPRZ1', 'PVRL1', 'PVRL2', 'PXN', 'PYGO1', 'PYGO2', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RALGDS', 'RANBP3', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RAPGEF2', 'RAPGEF6', 'RAPSN', 'RARA', 'RARB', 'RARG', 'RARS', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP5', 'RBMX', 'RBPJ', 'RBX1', 'RELA', 'REM1', 'RET', 'RHOA', 'RIPK2', 'RNF220', 'RNF43', 'ROBO1', 'ROCK1', 'ROCK2', 'ROR2', 'RPRD1A', 'RPS27A', 'RPSA', 'RSPO1', 'RSPO2', 'RSPO3', 'RSPO4', 'RUNX2', 'RUNX3', 'RUVBL1', 'RUVBL2', 'RXRA', 'RYK', 'S100A4', 'S100A6', 'SALL1', 'SALL4', 'SATB1', 'SCRIB', 'SDHC', 'SERPINE1', 'SETD2', 'SETD7', 'SFN', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHFM1', 'SHH', 'SIAH1', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT6', 'SKP1', 'SLC6A3', 'SLC9A3R1', 'SLCO1B3', 'SLCO2A1', 'SLIT1', 'SLK', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD5', 'SMAD7', 'SMAD9', 'SMARCA2', 'SMARCA4', 'SMARCA5', 'SMARCB1', 'SMO', 'SMURF1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNX1', 'SOST', 'SOX10', 'SOX13', 'SOX17', 'SOX1', 'SOX2', 'SOX3', 'SOX4', 'SOX6', 'SOX7', 'SOX8', 'SOX9', 'SP1', 'SP7', 'SPAG9', 'SPATA13', 'SPEN', 'SPN', 'SPP1', 'SRC', 'STAT3', 'STK11', 'STRAP', 'STX4', 'SUFU', 'SUV39H1', 'SYP', 'TADA3', 'TAX1BP3', 'TAZ', 'TBL1XR1', 'TBL1X', 'TBX5', 'TBX6', 'TCF12', 'TCF3', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TFAP2A', 'TFCP2', 'TFF1', 'TFF2', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBR1', 'TGFBR2', 'TGM2', 'TJP1', 'TJP2', 'TLE1', 'TLE2', 'TLE3', 'TLE4', 'TNFRSF11B', 'TNFSF11', 'TNF', 'TNIK', 'TNKS2', 'TNKS', 'TNS1', 'TOB1', 'TOP2A', 'TP53', 'TRAF4', 'TRIM33', 'TRIM37', 'TRIP10', 'TRRAP', 'TSC2', 'TUBA1A', 'TWIST1', 'TYMS', 'T', 'UBA52', 'UBB', 'UBC', 'UBE2B', 'UBE2R2', 'UBE3A', 'UBR5', 'UCHL1', 'UMPS', 'UPRT', 'USP4', 'USP7', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VAV2', 'VAV3', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VHL', 'VIM', 'WDR64', 'WDTC1', 'WHSC1', 'WIF1', 'WISP1', 'WLS', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'WWTR1', 'XPO1', 'YAP1', 'YARS', 'YEATS4', 'YES1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'ZAP70', 'ZAR1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZIC3', 'ZNRF3', 'ZYX', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 0.8457237349089901 Spearman Correlation: 0.8222161657476509 Coefficient of Determination: 0.7152479133794671 RMSE: 0.3934046604668098 NRMSE: 0.0792882803206179 MAPE: 485.7931715494529 Pearson Correlation: -0.05994051058143535 Spearman Correlation: 0.03626475465808214 Coefficient of Determination: -6.694629048635328e+19 RMSE: 6144389980.661753 NRMSE: 1524435563.1076646 MAPE: 624931837101.3053 Predictor: ElasticNet Pearson Correlation: 0.6147618287785473 Spearman Correlation: 0.5875591420653518 Coefficient of Determination: 0.33725906769148983 RMSE: 0.6001750538005775 NRMSE: 0.1209615764356123 MAPE: 471.93249210054756 Pearson Correlation: 0.33501271262517546 Spearman Correlation: 0.30139986342795827 Coefficient of Determination: 0.10292522896111056 RMSE: 0.7112623739329288 NRMSE: 0.17646563140299926 MAPE: 262.52830324175386 Predictor: RandomForests Pearson Correlation: 0.48964781659508405 Spearman Correlation: 0.42591540487819424 Coefficient of Determination: 0.1524610316084437 RMSE: 0.6787125513218671 NRMSE: 0.13679032414734207 MAPE: 640.6729987489709 Pearson Correlation: 0.33791524409775414 Spearman Correlation: 0.3253828894741977 Coefficient of Determination: 0.06691277163069864 RMSE: 0.725398471305571 NRMSE: 0.17997282570971346 MAPE: 300.0913099496041 Protein: CCNE1 Protein Interaction Partners Count: 350 x_train_column_count: 347 x_train columns: ['ABL1', 'AKT1', 'AKT2', 'AKT3', 'ALDH18A1', 'ANAPC10', 'ANAPC13', 'ANAPC1', 'ANAPC2', 'ANAPC4', 'ANAPC5', 'ANAPC7', 'ANXA5', 'ARID1A', 'AR', 'ATM', 'AURKA', 'AURKB', 'BARD1', 'BCL2L1', 'BIRC5', 'BRCA1', 'BRCA2', 'BTG2', 'BTRC', 'BUB1B', 'BUB1', 'BUB3', 'RGCC', 'MLIP', 'CABLES1', 'CALM1', 'CAPRIN1', 'CASP3', 'CASP9', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNF', 'CCNG1', 'CCNH', 'CCNK', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CDC16', 'CDC20', 'CDC23', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC26', 'CDC27', 'CDC45', 'CDC6', 'CDC7', 'CDCA2', 'CDCA5', 'CDCA8', 'CDH1', 'CDK12', 'CDK13', 'CDK14', 'CDK15', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CENPA', 'CENPE', 'CHAF1A', 'CHD1L', 'CHEK1', 'CHEK2', 'CINP', 'CKS1B', 'CKS2', 'COPS5', 'CREBBP', 'CSK', 'CTNNB1', 'CUL1', 'CUL3', 'CUL4B', 'DBF4B', 'DBF4', 'DGCR8', 'DICER1', 'DTL', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'EBNA1BP2', 'ECT2', 'EGFR', 'EGF', 'ELAVL1', 'ELSPBP1', 'EP400', 'ERBB2', 'ERBB3', 'ERBB4', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM58A', 'FAM83H', 'FBXO5', 'FBXW7', 'FEN1', 'FGFR1', 'FGFR2', 'FGFR3', 'FOXM1', 'FZR1', 'GAPDH', 'GLI1', 'GMNN', 'GSK3B', 'H1F0', 'HDAC1', 'HEATR3', 'HERC5', 'HIST1H1A', 'HIST1H1B', 'HIST1H4A', 'HRAS', 'IFNAR1', 'IGF1R', 'IGF1', 'ITPKB', 'JUN', 'KIF11', 'KIF20A', 'KIF23', 'KIF2C', 'KPNA2', 'KRAS', 'LATS2', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'GMNC', 'MAD2L1', 'MAPK3', 'MATK', 'MAX', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDM2', 'MEGF11', 'MELK', 'MKI67', 'KMT2D', 'KMT2B', 'MNAT1', 'MRE11A', 'MTOR', 'MYBL2', 'MYC', 'NBN', 'NF1', 'NFYB', 'NMI', 'NOTCH1', 'NOTCH3', 'NPAT', 'NRAS', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PARK2', 'PARP1', 'PCBP4', 'PCNA', 'PIK3CA', 'PIK3R1', 'PKMYT1', 'PLK1', 'PLK4', 'POLA1', 'POLD1', 'PPP1R1C', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R4', 'PRC1', 'PRKAR1A', 'PRKAR2A', 'PRMT5', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB10', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSMF1', 'PTEN', 'PTGDR', 'PTK6', 'PTTG1', 'RAD51', 'RAD54L', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RBX1', 'REL', 'REM1', 'RHOA', 'RHOBTB3', 'RINT1', 'RNASE1', 'RPRD1A', 'RPS27A', 'RRM1', 'RRM2', 'RRN3', 'RSF1', 'SHFM1', 'SKP1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'ST8SIA1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STK3', 'STK4', 'TARBP1', 'TCP1', 'TERF1', 'TERT', 'TFDP1', 'TK1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TPX2', 'TTK', 'TUBG1', 'TYMS', 'UBA52', 'UBB', 'UBC', 'UBE2C', 'UBE2QL1', 'UBE2S', 'UHRF2', 'WEE1', 'WEE2', 'XIAP', 'YAP1', 'ZNF217', 'ZNF33A', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.36076158694477584 Spearman Correlation: 0.3150471647698684 Coefficient of Determination: -0.17098883786255858 RMSE: 0.5233913854928639 NRMSE: 0.12631015408761828 MAPE: 103.17492837918361 Pearson Correlation: 0.04322828490707103 Spearman Correlation: 0.22832621960975036 Coefficient of Determination: -2.5957662305258604e+25 RMSE: 2736147079848.456 NRMSE: 974584890417.9718 MAPE: 28033477604644.03 Predictor: ElasticNet Pearson Correlation: 0.5102617030320519 Spearman Correlation: 0.41181944642231444 Coefficient of Determination: 0.23269404995009646 RMSE: 0.4236765974576527 NRMSE: 0.10224596313865693 MAPE: 102.74947002623638 Pearson Correlation: 0.6334811860063235 Spearman Correlation: 0.39450067692997787 Coefficient of Determination: 0.3454844012477988 RMSE: 0.43447685935317437 NRMSE: 0.15475578249445213 MAPE: 60.37668412167827 Predictor: RandomForests Pearson Correlation: 0.5292470055653217 Spearman Correlation: 0.44838084840927317 Coefficient of Determination: 0.26567771390939565 RMSE: 0.4144704256475988 NRMSE: 0.10002423574283824 MAPE: 106.07045271979926 Pearson Correlation: 0.6039799393510952 Spearman Correlation: 0.4723554728682901 Coefficient of Determination: 0.35114216540649545 RMSE: 0.43259493101137286 NRMSE: 0.15408546073423787 MAPE: 61.38094293398202 Protein: CCND1 Protein Interaction Partners Count: 857 x_train_column_count: 847 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTL6B', 'AFP', 'AHR', 'AKAP12', 'AKAP8', 'AKR1B10', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDOA', 'ALK', 'ANO1', 'ANXA5', 'APAF1', 'APC', 'APEX1', 'AREG', 'ARHGEF2', 'ARID1A', 'ARID1B', 'ARID2', 'ARID4A', 'AR', 'ASIP', 'ATF2', 'ATF3', 'ATF4', 'ATM', 'ATXN1', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'B2M', 'BANP', 'BARX2', 'BAX', 'BCAR1', 'BCAR3', 'BCCIP', 'BCL2A1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL3', 'BCL6', 'BCL9', 'BECN1', 'BGLAP', 'BHLHE40', 'BIRC2', 'BIRC3', 'BIRC5', 'BMI1', 'BMP4', 'BMP6', 'BRAF', 'BRCA1', 'BRCA2', 'BRD2', 'BRD4', 'BTC', 'BTG2', 'BTRC', 'RGCC', 'COPRS', 'CA9', 'CARD11', 'CARM1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBFB', 'CCDC62', 'CCL2', 'CCL5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNC', 'CCND2', 'CCND3', 'CCNDBP1', 'CCNE1', 'CCNE2', 'CCNG2', 'CCNH', 'CCNK', 'CCNL1', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CD19', 'CD22', 'CD24', 'CD34', 'CD38', 'CD44', 'CD5', 'CD79A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC6', 'CDC73', 'CDCA7L', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK12', 'CDK13', 'CDK14', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK20', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CDX2', 'CENPE', 'CEP57', 'CFLAR', 'CHEK1', 'CHEK2', 'CHKA', 'CHUK', 'CKS1B', 'CKS2', 'CLCN3', 'COL1A1', 'CR2', 'CREB1', 'CREBBP', 'CRKL', 'CRYAB', 'CSF2', 'CTBP1', 'CTGF', 'CTNNB1', 'CTNND1', 'CTTN', 'CUL1', 'CUL3', 'CUL7', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'CYR61', 'DACH1', 'DAXX', 'DDIT3', 'DDX53', 'DECR1', 'DHFR', 'DICER1', 'DKK1', 'DKK3', 'DLL1', 'DMTF1', 'DND1', 'DNMT1', 'DNMT3A', 'DNTT', 'DVL1', 'DVL2', 'DYRK1A', 'DYRK1B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EDN1', 'EEF1A1', 'EGFR', 'EGF', 'EGLN2', 'EGR1', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF3I', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4E', 'EIF4G1', 'ELAVL1', 'ELSPBP1', 'EP300', 'EPCAM', 'EPHA2', 'EPHA7', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EWSR1', 'EYA1', 'EZH2', 'FABP4', 'FADD', 'FAM58A', 'FAM83H', 'FASLG', 'FAT1', 'FBXO31', 'FBXO4', 'FBXW7', 'FBXW8', 'FGF13', 'FGF19', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FHL2', 'FIGF', 'FLCN', 'FLNA', 'FLT1', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXC1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FRZB', 'FSTL3', 'FZD1', 'FZD2', 'FZD7', 'FZD9', 'FZR1', 'GADD45A', 'GAL', 'GAPDH', 'GAST', 'GATA3', 'GATA4', 'GDF15', 'GDF2', 'GGNBP2', 'GGT1', 'GIT1', 'GJA1', 'GJB1', 'GLI1', 'GLI2', 'GLI3', 'GLTSCR2', 'GNB2L1', 'GPER1', 'GRB2', 'GREB1', 'GRM4', 'GRP', 'GSK3B', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HBEGF', 'HBZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC4', 'HEXIM1', 'HEY1', 'HGF', 'HIF1A', 'HIST1H2AA', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AH', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AC', 'HIST2H2BE', 'HIST2H4A', 'HIST4H4', 'HMGA2', 'HMOX1', 'HNF1A', 'HNF4A', 'HNRNPD', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB8', 'ICAM1', 'ID1', 'ID2', 'IFNAR1', 'IFNB1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP3', 'IGFBP5', 'IHH', 'IKBKB', 'IL10', 'IL17A', 'IL2', 'IL4', 'IL6', 'IL7', 'CXCL8', 'ILK', 'INSM1', 'INS', 'IRF1', 'IRS1', 'ISG15', 'ITGB1', 'ITPKB', 'ITPKC', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUNB', 'JUND', 'JUN', 'KAT2A', 'KAT2B', 'KDM1A', 'KDM5B', 'KDR', 'KHDRBS1', 'KIF18B', 'KIN', 'KITLG', 'KIT', 'KLF13', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KRAS', 'KRT10', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LDB3', 'LEF1', 'LEP', 'LGALS3', 'LGR5', 'LIMK2', 'LIMS1', 'LIN28B', 'LMNA', 'LMNB1', 'LOX', 'LRP5', 'LRP6', 'LYN', 'MAFB', 'MAF', 'MAML1', 'MAML2', 'MAML3', 'MAMLD1', 'MAP2K1', 'MAP2K2', 'MAP2K4', 'MAP2K7', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDK', 'MDM2', 'MDM4', 'MEN1', 'MET', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'MLXIPL', 'MME', 'MMP11', 'MMP14', 'MMP15', 'MMP1', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MNAT1', 'MOV10', 'MSH2', 'MST1', 'MTOR', 'MUC1', 'MYBL2', 'MYB', 'MYCN', 'MYC', 'MYEOV', 'MYF5', 'MYOD1', 'MYOG', 'NACA2', 'NADSYN1', 'NANOG', 'NCAM1', 'NCOA1', 'NCOA3', 'NCOR1', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NGF', 'NME1', 'NME2', 'NMI', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NQO1', 'NR0B2', 'NR1H3', 'NR2E1', 'NR3C1', 'NR4A3', 'NRAS', 'NRF1', 'NUDT21', 'ODC1', 'ORAI1', 'ORAOV1', 'ORC4', 'PAK1', 'PAK4', 'PARK2', 'PARP1', 'PAX2', 'PAX5', 'PAX6', 'PBRM1', 'PBX3', 'PCNA', 'PDCD4', 'PDGFRA', 'PDGFRB', 'PDZK1', 'PECAM1', 'PELP1', 'PGR', 'PI3', 'PI4K2A', 'PIK3CA', 'PIK3R1', 'PKLR', 'PKM', 'PLAUR', 'PLAU', 'PLK1', 'PMAIP1', 'POLR2A', 'POTEF', 'POU2F1', 'POU5F1', 'PPARG', 'PPP2R4', 'PRDM5', 'PRKACA', 'PRL', 'PRMT5', 'PRNP', 'PROM1', 'PSAT1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTCHD3', 'PTEN', 'PTF1A', 'PTGS2', 'PTHLH', 'PTH', 'PTK2', 'PTK6', 'PTPN11', 'PTPRCAP', 'PTPRC', 'PXN', 'RAD51', 'RAF1', 'RALA', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RBX1', 'RCC1', 'RELA', 'RELB', 'REL', 'REM1', 'RET', 'RHEB', 'RHOA', 'RHOC', 'RICTOR', 'RNASE1', 'DROSHA', 'RND3', 'RNMT', 'ROCK1', 'RPRD1B', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KA6', 'RPS6KB1', 'RPS6', 'RPTOR', 'RREB1', 'RSF1', 'RUNX1', 'RUNX2', 'RUNX3', 'SDC1', 'SDHC', 'SENP1', 'SERPINE1', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHC1', 'SHFM1', 'SHH', 'SIRT1', 'SIX1', 'SIX3', 'SKP1', 'SKP2', 'SLC25A16', 'SLC25A6', 'SLC2A1', 'SLC35B2', 'SLC39A4', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMO', 'SNAI1', 'SNAI2', 'SNCA', 'SNIP1', 'SNW1', 'SNX33', 'SOCS3', 'SOX11', 'SOX17', 'SOX2', 'SOX4', 'SOX6', 'SOX9', 'SP1', 'SPN', 'SPP1', 'SPRY1', 'SRC', 'SREBF1', 'STAT1', 'STAT3', 'STAT4', 'STAT5A', 'STAT5B', 'STAT6', 'STC2', 'STIM1', 'STK11', 'STK24', 'STMN1', 'SUFU', 'SULF2', 'SUV39H1', 'TAF1', 'TBP', 'TBX2', 'TCEAL7', 'TCF4', 'TCF7L2', 'TCF7', 'TERT', 'TET3', 'TFDP1', 'TFF1', 'TGFA', 'TGFB1', 'TGFBR2', 'THBS1', 'THRA', 'THRB', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLR9', 'TM4SF1', 'TMPRSS4', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF8', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP2A', 'TP53', 'TP63', 'TP73', 'TRPV2', 'TSC22D3', 'TSC2', 'TWIST1', 'TXN', 'TYMS', 'UBA52', 'UBA7', 'UBB', 'UBC', 'UBE2C', 'UBTF', 'URGCP', 'USP18', 'USP2', 'USP9X', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VIP', 'VRK1', 'WDR77', 'WDTC1', 'WEE1', 'WHSC1', 'WIF1', 'WISP1', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'XBP1', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YY1', 'ZBTB17', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 0.7142218484556891 Spearman Correlation: 0.6728498997929219 Coefficient of Determination: 0.41073853652766945 RMSE: 0.18338308484948476 NRMSE: 0.11024460740491564 MAPE: 278.0625502293819 Pearson Correlation: 0.03918868717921086 Spearman Correlation: 0.07277628188776925 Coefficient of Determination: -5.65134362552651e+24 RMSE: 558529804263.7294 NRMSE: 397790584769.9058 MAPE: 133827626340589.25 Predictor: ElasticNet Pearson Correlation: 0.3587868299363726 Spearman Correlation: 0.350756522108242 Coefficient of Determination: 0.08971229794821933 RMSE: 0.22792637940989469 NRMSE: 0.13702274795896088 MAPE: 399.85345317153025 Pearson Correlation: 0.16893375206972622 Spearman Correlation: 0.22401012585389526 Coefficient of Determination: 0.026949515958054615 RMSE: 0.23175983973917857 NRMSE: 0.16506170569994486 MAPE: 1462.4386035494808 Predictor: RandomForests Pearson Correlation: 0.4162268487325448 Spearman Correlation: 0.3668455364708414 Coefficient of Determination: 0.1155791349711307 RMSE: 0.224664650274852 NRMSE: 0.13506189072804944 MAPE: 399.6464467711317 Pearson Correlation: 0.1844377172615085 Spearman Correlation: 0.21345137279274468 Coefficient of Determination: 0.029177722990154975 RMSE: 0.23149433199534325 NRMSE: 0.16487260839506526 MAPE: 1359.0387188628677 Protein: ERBB2 Protein Interaction Partners Count: 663 x_train_column_count: 655 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACPP', 'ACTA2', 'ACTB', 'ACTG1', 'ADAM10', 'ADAM17', 'ADRB2', 'AFP', 'AGRN', 'AKT1S1', 'AKT1', 'AKT2', 'ALB', 'ALDH1A1', 'ALK', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'ANO1', 'ANXA2', 'ANXA5', 'AP2B1', 'APP', 'AREG', 'ARHGEF11', 'ARHGEF12', 'ARID1A', 'ARL6IP5', 'AR', 'ATM', 'ATP2B2', 'AURKB', 'AXIN1', 'BAG1', 'BARD1', 'BCAR1', 'BCAR3', 'BCAS1', 'BCL2L11', 'BCL2L1', 'BDNF', 'BECN1', 'BEST1', 'BIRC5', 'BLNK', 'BMI1', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BSG', 'BTC', 'MIEN1', 'CA9', 'CALU', 'CARTPT', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAV1', 'CBLB', 'CBLC', 'CBL', 'CCL27', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD19', 'CD22', 'CD247', 'CD24', 'CD274', 'CD28', 'CD33', 'CD34', 'CD44', 'CD46', 'CD52', 'CD68', 'CD6', 'CD80', 'CD82', 'CDC37', 'CDC42', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK4', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CEACAM5', 'CEP70', 'CHEK2', 'CHGA', 'CHKA', 'CHKB', 'CISH', 'CLDN3', 'CLDN4', 'CLDN7', 'CLTC', 'CNN1', 'COPS5', 'CPNE3', 'CREB1', 'CRKL', 'CRK', 'YBX3', 'CSF1', 'CSF2', 'CSF3', 'CSK', 'CSPG4', 'CTAG1B', 'CTLA4', 'CTNNB1', 'CTNND1', 'CTSB', 'CTSD', 'CTTN', 'CUL5', 'CXCL12', 'CXCR1', 'CXCR4', 'CYCS', 'CYP19A1', 'CYTIP', 'DCN', 'DDX41', 'DDX53', 'DHH', 'DIAPH1', 'DICER1', 'DLG4', 'DMTF1', 'DNAJA3', 'DNM2', 'DNMT1', 'DOCK1', 'DOCK7', 'DUSP6', 'E2F1', 'E2F3', 'EEA1', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EGFR', 'EGF', 'EIF3A', 'EIF4EBP1', 'EIF4E', 'ELAVL1', 'ELF3', 'EML4', 'ENO2', 'EP300', 'EPCAM', 'EPGN', 'EPHA2', 'EPS15', 'EPX', 'ERAL1', 'ERBB2IP', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ERRFI1', 'ESCO1', 'ESR1', 'ESR2', 'ESRRB', 'ETS1', 'ETS2', 'ETV4', 'ETV6', 'EZH2', 'EZR', 'FASLG', 'FASN', 'FBXW7', 'FCGR1A', 'FCGR1B', 'FCGRT', 'FGF10', 'FGF13', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FIGF', 'FLT1', 'FLT3LG', 'FN1', 'FOLH1', 'FOLR1', 'FOS', 'FOXA1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXP3', 'FREM2', 'FSIP1', 'FYN', 'GAB1', 'GABPB1', 'GAPDH', 'GATA3', 'GATA4', 'GDF2', 'GLI1', 'GLI2', 'GLS', 'GNA11', 'GNAQ', 'GNAS', 'GNRH1', 'GPER1', 'GRAP2', 'GRB2', 'GRB7', 'GSTP1', 'GZMB', 'H2AFX', 'H2AFY', 'HBEGF', 'HDAC1', 'HDAC6', 'HEATR6', 'HGF', 'HIF1A', 'HK1', 'HMGA2', 'HNF4A', 'HOXB7', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPG2', 'ICAM1', 'ID1', 'IDH1', 'IDH2', 'IFNG', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IHH', 'IL10', 'IL2', 'IL4', 'IL6R', 'IL6ST', 'IL6', 'CXCL8', 'ILK', 'INPP4B', 'INS', 'IQGAP1', 'IQSEC1', 'IRS1', 'ITGA5', 'ITGA6', 'ITGAV', 'ITGB1', 'ITGB3', 'ITGB4', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JUN', 'JUP', 'KDR', 'KITLG', 'KLK3', 'KLRK1', 'KRAS', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'L1CAM', 'LAMP1', 'LCN2', 'LDHA', 'LEP', 'LIN28A', 'LIN7A', 'LIN7B', 'LIN7C', 'LINGO1', 'LOX', 'LRIG1', 'LRPPRC', 'MAGEA1', 'MAGEA3', 'MAGED4B', 'MAGED4', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK8', 'MATK', 'MCL1', 'MDK', 'MDM2', 'MEMO1', 'MET', 'MGMT', 'MKI67', 'MLANA', 'MLH1', 'KMT2C', 'MME', 'MMP11', 'MMP14', 'MMP16', 'MMP1', 'MMP2', 'MMP7', 'MMP9', 'MPP1', 'MRAP', 'MRAS', 'MSH2', 'MSH6', 'MSLN', 'MTA1', 'MTOR', 'MUC13', 'MUC16', 'MUC1', 'MUC4', 'MUC6', 'MUCL1', 'MYBL2', 'MYCN', 'MYC', 'NANOG', 'NCAM1', 'NCL', 'NCOA1', 'NCOA3', 'NCOR1', 'NDRG1', 'NF1', 'NF2', 'NFE2L2', 'NGF', 'NISCH', 'NME1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NR1H4', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NRP1', 'NTF3', 'NTF4', 'OPCML', 'OSMR', 'PA2G4', 'PADI2', 'PAK1', 'PALB2', 'PAQR3', 'PARP1', 'PAX2', 'PCSK9', 'PDCD1LG2', 'PDCD1', 'PDCD4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PDGFRA', 'PDPN', 'PECAM1', 'PELP1', 'PEPD', 'PFKFB3', 'PGAP3', 'PGF', 'PGR', 'PI3', 'PIK3C2A', 'PIK3C2B', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIN1', 'PIP', 'PLAUR', 'PLAU', 'PLCG1', 'PLCG2', 'PLEK', 'PLG', 'PLXNB1', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPP3CA', 'PRDM10', 'PRF1', 'PRKACA', 'PRL', 'PROM1', 'PSCA', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'PTPN1', 'PTPRC', 'PTPRO', 'PTPRU', 'PTS', 'PXN', 'RAB25', 'RAD51', 'RAF1', 'RANBP2', 'RARA', 'RASA1', 'RASA2', 'RASSF1', 'RB1', 'RBPJ', 'RDX', 'RECK', 'REM1', 'REN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'S100A14', 'SCGB2A2', 'SCUBE2', 'SDC1', 'SDHC', 'SEMA3D', 'SEMA4D', 'SERPINB5', 'SERPINE1', 'SFRP1', 'PEAK1', 'SH3BGRL3', 'SH3BGRL', 'SH3TC2', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SIAH2', 'PMEL', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC4A7', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SMUG1', 'SMYD3', 'SNAI1', 'SNAI2', 'SOCS1', 'SOS1', 'SOX10', 'SOX2', 'SOX9', 'SP3', 'SPP1', 'SPRY2', 'SRCIN1', 'SRC', 'STARD3', 'STAT1', 'STAT2', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STOM', 'STUB1', 'SYP', 'TAGLN', 'TBX1', 'TERT', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TFRC', 'TGFA', 'TGFB1', 'THBS1', 'THRA', 'TIMP1', 'TJP1', 'TMPRSS2', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF4', 'TNFRSF8', 'TNFRSF9', 'TNFSF11', 'TNF', 'TNS1', 'TNS3', 'TNS4', 'TOB1', 'TOP1', 'TOP2A', 'TP53', 'TP63', 'TSC2', 'TWIST1', 'TYMS', 'TYR', 'UBA52', 'UBB', 'UBC', 'USP2', 'USP9X', 'VAV1', 'VAV2', 'VAV3', 'VCL', 'VEGFA', 'VEGFB', 'VEGFC', 'VIM', 'WASL', 'WDFY2', 'WDTC1', 'WNT10A', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7B', 'WNT9A', 'WNT9B', 'WT1', 'WWOX', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YES1', 'YY1', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 0.7820173527980064 Spearman Correlation: 0.693373498202623 Coefficient of Determination: 0.6056920409053114 RMSE: 0.6399563840651518 NRMSE: 0.10902710258874419 MAPE: 849.50905070144 Pearson Correlation: -0.01653199153729738 Spearman Correlation: 0.19359034503286865 Coefficient of Determination: -1.7463651508835767e+24 RMSE: 1198654997128.4539 NRMSE: 222261264069.80417 MAPE: 314104162509477.6 Predictor: ElasticNet Pearson Correlation: 0.6529698043267042 Spearman Correlation: 0.5595287445994966 Coefficient of Determination: 0.40438284712899 RMSE: 0.786531648185524 NRMSE: 0.1339986112042394 MAPE: 870.7727783821557 Pearson Correlation: 0.37883704376015737 Spearman Correlation: 0.401404741000878 Coefficient of Determination: 0.11282053799618164 RMSE: 0.854343288010086 NRMSE: 0.15841707547006972 MAPE: 693.0025918621835 Predictor: RandomForests Pearson Correlation: 0.6149113929114465 Spearman Correlation: 0.4964835790922571 Coefficient of Determination: 0.25538015662688174 RMSE: 0.8794272264286959 NRMSE: 0.14982490185677222 MAPE: 755.2601825842303 Pearson Correlation: 0.3368158016514111 Spearman Correlation: 0.3750986221495254 Coefficient of Determination: 0.09731002203084704 RMSE: 0.8617791499826027 NRMSE: 0.1597958742782501 MAPE: 557.0141632415371 Protein: ERBB3 Protein Interaction Partners Count: 245 x_train_column_count: 247 x_train columns: ['ADAM17', 'AGRN', 'AGTR2', 'AKT1', 'AKT2', 'AKT3', 'ALAS2', 'ALB', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'APIP', 'AREG', 'AR', 'BAMBI', 'BDNF', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BTC', 'CADM4', 'CASK', 'CASP3', 'CBLB', 'CBLC', 'CBL', 'CCND1', 'CCNE1', 'CD44', 'CD82', 'CDC42', 'CDH1', 'CDK4', 'CDK5', 'CDKN1B', 'CDKN2A', 'CLEC16A', 'COMMD5', 'COQ7', 'CRKL', 'CRK', 'CRYZL1', 'CSF1', 'CSK', 'CSPG5', 'CTNNB1', 'DCN', 'DHH', 'DOCK7', 'DUSP6', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EIF4EBP1', 'EIF4E', 'EML4', 'EPCAM', 'EPGN', 'EPN1', 'ERBB2IP', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'ESR2', 'FBXO9', 'FGF10', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FIGF', 'FKBP14', 'FLNA', 'FLT3LG', 'FN1', 'FOXA1', 'FOXO3', 'FREM2', 'FTSJ1', 'GAB1', 'GAPDH', 'GLE1', 'GRB2', 'GRB7', 'GRHL2', 'HBEGF', 'HGF', 'HGS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPG2', 'IGF1', 'IGF2', 'IL6ST', 'ILK', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'ITPKB', 'JAK1', 'JAK2', 'JUN', 'KDR', 'KITLG', 'KRAS', 'L1CAM', 'LAMA1', 'LAMB1', 'LAMC2', 'LIN7A', 'LIN7B', 'LIN7C', 'LRIG1', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARCH7', 'MDM2', 'MET', 'MITF', 'MMP9', 'MRPL49', 'MTOR', 'MUC1', 'MUC4', 'MYC', 'N4BP1', 'NDRG1', 'NEDD4L', 'NEDD4', 'NF1', 'NGF', 'NICN1', 'NOTCH1', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NTF3', 'NTF4', 'OAT', 'PA2G4', 'PARK7', 'PCSK9', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PGR', 'PI3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIP5K1C', 'PLCG1', 'PLCG2', 'PPP1R9A', 'PRKACA', 'PTEN', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN22', 'PTPN2', 'RASA1', 'RASA2', 'REM1', 'RGS4', 'RHOA', 'RHOC', 'RNF41', 'ROR1', 'RRAS2', 'SH2B3', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SLC25A16', 'SMAD4', 'SNAI2', 'SOS1', 'SOX10', 'SOX2', 'SPARC', 'SPRY2', 'SRC', 'STAT3', 'STAT5A', 'STAT5B', 'SYN3', 'TCF7L2', 'TGFA', 'TMEFF2', 'TNFRSF13C', 'TNS1', 'TP53', 'USP8', 'VAV1', 'VAV2', 'VAV3', 'VEGFA', 'VEGFB', 'VEGFC', 'WNT1', 'WNT5A', 'ZEB1', 'ZNF217', 'KRBOX4', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.5051721802977225 Spearman Correlation: 0.4548644603394962 Coefficient of Determination: 0.25156063601015666 RMSE: 0.3972113676388744 NRMSE: 0.10719594751512612 MAPE: 223.95580831430445 Pearson Correlation: -0.04989613632002816 Spearman Correlation: 0.21853835577596933 Coefficient of Determination: -5.29222383391219e+23 RMSE: 338654294590.7766 NRMSE: 135887862172.08229 MAPE: 71065210319759.67 Predictor: ElasticNet Pearson Correlation: 0.3824473594823769 Spearman Correlation: 0.3790630624198488 Coefficient of Determination: 0.13478881364826367 RMSE: 0.42707526721728917 NRMSE: 0.11525535686897725 MAPE: 215.96599873422977 Pearson Correlation: 0.33516350090289065 Spearman Correlation: 0.34794420991690295 Coefficient of Determination: 0.09242011497824976 RMSE: 0.4434860016976849 NRMSE: 0.17795245959235556 MAPE: 239.6295165325725 Predictor: RandomForests Pearson Correlation: 0.4357474450415512 Spearman Correlation: 0.3850333643157318 Coefficient of Determination: 0.1529150883468432 RMSE: 0.4225779495173189 NRMSE: 0.11404165990206881 MAPE: 212.12206139020475 Pearson Correlation: 0.23856513632587031 Spearman Correlation: 0.3406452436484165 Coefficient of Determination: 0.04447579238552668 RMSE: 0.45504917601837935 NRMSE: 0.1825922797967945 MAPE: 274.1854725168441 Fold: 2 Protein: RB1 Protein Interaction Partners Count: 369 x_train_column_count: 366 x_train columns: ['AATF', 'ABCC1', 'ABL1', 'ACTL6A', 'ACTL6B', 'AFAP1', 'AHR', 'AKT1', 'ANXA5', 'ARID1A', 'ARID1B', 'ARID4A', 'ARMCX1', 'ARMCX2', 'ARMCX3', 'ARNT', 'AR', 'ASF1A', 'ATF2', 'ATM', 'AURKB', 'BCR', 'BDP1', 'BGLAP', 'BRCA1', 'BRF1', 'FAM208A', 'C4BPA', 'CABIN1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CBFB', 'CBX1', 'CBX4', 'CBX5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNT2', 'CDC25A', 'CDC27', 'CDC6', 'CDH1', 'CDK14', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPA', 'CEBPB', 'CEBPD', 'CEBPE', 'CHEK1', 'CHEK2', 'CLNK', 'COL1A1', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUX1', 'DCAF10', 'DGKZ', 'DNAJA3', 'DNMT1', 'DNMT3A', 'DUSP1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EGFR', 'EGF', 'EID1', 'EIF2AK1', 'EIF2AK4', 'AGO2', 'ELF1', 'ENC1', 'EP300', 'ERBB2', 'ESD', 'ESR1', 'ESR2', 'EZH2', 'FBXW7', 'FMO5', 'FOS', 'FOXM1', 'FRK', 'FZR1', 'G6PD', 'GAPDH', 'GATA1', 'GJA1', 'GNB2L1', 'GRB2', 'GSC', 'GTF2H1', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HARS2', 'HARS', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC8', 'HDC', 'HES1', 'HIF1A', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HIST4H4', 'HMGA1', 'HMGA2', 'HRAS', 'HSP90AA1', 'HSPA1A', 'HSPA8', 'ID2', 'IFI16', 'INS', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'KDM2A', 'KDM4A', 'KDM5A', 'KDM5B', 'PPP1R26', 'KIF11', 'KRAS', 'KRT10', 'KRT14', 'KRT5', 'L3MBTL2', 'L3MBTL1', 'LIMD1', 'LIN52', 'LIN54', 'LIN9', 'LMNA', 'LOR', 'LPAR6', 'MAF', 'MAP2K7', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEF2C', 'MORF4L1', 'MRFAP1', 'MRPL11', 'MRPS18B', 'MSH6', 'MTL5', 'MYBL2', 'MYC', 'MYOD1', 'NACC2', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NCR1', 'NDC80', 'NEO1', 'NFYA', 'NFYB', 'NFYC', 'NGF', 'NOTCH1', 'NPM1', 'NRAS', 'ORC1', 'PA2G4', 'PAX2', 'PAX3', 'PAX5', 'PAX6', 'PAX8', 'PCNA', 'PELP1', 'PGR', 'PHB', 'PHF21B', 'PIAS4', 'PIK3CA', 'PIK3R1', 'PIK3R3', 'PLK1', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPIA', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP1R3A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R3B', 'PPRC1', 'PRB1', 'PRB3', 'PRB4', 'PRDM2', 'PRH1', 'PRH2', 'PRIM1', 'PRIM2', 'PRKCB', 'PRMT2', 'PSMA7', 'PSMC1', 'PSMD10', 'PTEN', 'PTGDR', 'RAF1', 'RB1CC1', 'RBAK', 'RBBP4', 'RBBP5', 'RBBP6', 'RBBP7', 'RBBP8', 'RBBP9', 'RBL1', 'RBL2', 'RBFOX2', 'RFC1', 'RPS6KB1', 'RUNX2', 'S100A6', 'SETD1B', 'SETD7', 'SIRT1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMC1A', 'SMC2', 'SMC4', 'SMC5', 'SMYD2', 'SNW1', 'SP100', 'SP1', 'SP3', 'SPI1', 'STAM', 'STAT3', 'SUV39H1', 'SUV420H2', 'SUZ12', 'TAF1', 'TBP', 'TERT', 'TFAP2A', 'TFDP1', 'TFDP3', 'TGM2', 'THAP1', 'TMPO', 'TNS1', 'TOP2A', 'TP53BP1', 'TP53', 'TP73', 'TRDMT1', 'TRIM27', 'TTK', 'UBE2I', 'UBE3A', 'UBL4A', 'UBN1', 'UBR4', 'UBTF', 'UHRF1', 'USP4', 'USP7', 'VEGFA', 'VPS39', 'WDR59', 'WDR73', 'WEE1', 'WWTR1', 'YAP1', 'YY1', 'ZBTB16', 'ZBTB7A', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.18083619317311717 Spearman Correlation: 0.18814467460915066 Coefficient of Determination: -0.35247205602704623 RMSE: 0.27334304705339224 NRMSE: 0.09996454324655948 MAPE: 861.4199781569883 Pearson Correlation: -0.04248073085797144 Spearman Correlation: 0.021827073400503133 Coefficient of Determination: -5.46254737219535e+23 RMSE: 181006242296.9217 NRMSE: 103703545448.61505 MAPE: 21348641198433.54 Predictor: ElasticNet Pearson Correlation: 0.21987798575164602 Spearman Correlation: 0.17998807549626114 Coefficient of Determination: 0.03228017950869411 RMSE: 0.2312164341102911 NRMSE: 0.0845583799408613 MAPE: 210.3149024104213 Pearson Correlation: 0.10928530507687238 Spearman Correlation: 0.1873429445145529 Coefficient of Determination: -0.005444032116810549 RMSE: 0.24556976503152267 NRMSE: 0.1406937957806847 MAPE: 274.45625825059665 Predictor: RandomForests Pearson Correlation: 0.33430237522012646 Spearman Correlation: 0.2525623988697978 Coefficient of Determination: 0.06471762227256583 RMSE: 0.22730828053410973 NRMSE: 0.08312912541475634 MAPE: 221.4953440154659 Pearson Correlation: 0.1410807783961517 Spearman Correlation: 0.19919300457653644 Coefficient of Determination: 0.002446030739954752 RMSE: 0.24460433235526868 NRMSE: 0.14014067236267985 MAPE: 250.38017130552345 Protein: CDH1 Protein Interaction Partners Count: 834 x_train_column_count: 823 x_train columns: ['ABCB1', 'ABCG2', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTR3', 'ACVR1B', 'ADAM10', 'ADAM15', 'ADAM17', 'ADAM9', 'AFP', 'AIMP1', 'AJAP1', 'AKAP9', 'AKT1', 'AKT2', 'AKTIP', 'ALB', 'ALCAM', 'ALDH1A1', 'ALDH3A1', 'ALK', 'AMOTL2', 'ANAPC4', 'ANAPC7', 'ANO1', 'ANXA2', 'ANXA5', 'AP1M1', 'AP1M2', 'APC2', 'APC', 'AQP1', 'AQP5', 'AREG', 'ARF6', 'ARHGAP31', 'ARID1A', 'ARL2BP', 'ARMC7', 'ARPC1A', 'ARPC2', 'ARRB2', 'ARVCF', 'AR', 'CLMP', 'ASF1A', 'ATF2', 'ATF3', 'ATM', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BAG3', 'BANP', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL6B', 'BCL9L', 'BCORL1', 'BMI1', 'BMP2', 'BMP4', 'BMP6', 'BMP7', 'BNIP3', 'BRCA1', 'BRCA2', 'BSG', 'BTBD7', 'BTC', 'BTF3', 'ANAPC15', 'CA2', 'CA9', 'CALCA', 'CALR', 'CAPN1', 'CAPNS1', 'CASP3', 'CASP8', 'CASP9', 'CASS4', 'CAV1', 'CBLL1', 'CBL', 'CBX7', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CCR7', 'CD1A', 'CD1B', 'CD1C', 'CD1E', 'CD207', 'CD24', 'CD274', 'CD276', 'CD2AP', 'CD34', 'CD44', 'CD46', 'CD68', 'CD82', 'CDC16', 'CDC23', 'CDC27', 'CDC42', 'CDC6', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH24', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK14', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN3', 'CDX2', 'CEACAM5', 'CFL1', 'CGN', 'CHGA', 'CHL1', 'CLCA2', 'CLDN1', 'CLDN2', 'CLDN3', 'CLDN4', 'CLDN5', 'CLDN7', 'CNTN1', 'COL1A1', 'CORO1C', 'CRB3', 'CREB1', 'CREBBP', 'CRYAB', 'YBX3', 'CSDC2', 'CSE1L', 'CSF2', 'CSNK2A1', 'CSNK2A2', 'CST5', 'CTBP1', 'CTBP2', 'CTCF', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTSL', 'CTTN', 'CXCL12', 'CXCL1', 'CXCR4', 'CYP1B1', 'DAAM1', 'DAB2IP', 'DACH1', 'DAPK1', 'DAP', 'DDR1', 'DDR2', 'DDX3X', 'DICER1', 'DKK1', 'DLC1', 'DLG1', 'DLG5', 'DNM2', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOT1L', 'DPAGT1', 'DPEP1', 'DSP', 'DUOX1', 'DUSP4', 'DVL1', 'DVL2', 'E2F1', 'ECT2', 'EDN1', 'EFEMP1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'EHD1', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'ELAVL1', 'ELF3', 'ENAH', 'ENG', 'EP300', 'EPB41L3', 'EPCAM', 'EPHA10', 'EPHA1', 'EPHA2', 'EPPK1', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ESRP1', 'ESRP2', 'ETS1', 'ETS2', 'EXOC3', 'EXOC4', 'EYA2', 'EZH2', 'EZR', 'F11R', 'F2RL2', 'SUPT20H', 'FBXL5', 'FER', 'FGF10', 'FGF13', 'FGF17', 'FGF19', 'FGF2', 'FGF4', 'FGF5', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FMN1', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC1', 'FOXC2', 'FOXJ2', 'FOXK2', 'FOXL1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXQ1', 'FRMPD2', 'FSCN1', 'FUT4', 'FXYD5', 'FYN', 'FZD1', 'FZD4', 'FZD7', 'FZR1', 'G6PD', 'GAB2', 'GABPA', 'GADD45A', 'GAPDH', 'GAS6', 'GATA1', 'GATA3', 'GATA4', 'GATA6', 'GDNF', 'GFRA1', 'GGT1', 'GJA1', 'GJB1', 'GJB2', 'GKN2', 'GLI1', 'GLI2', 'GMNN', 'GNA12', 'GNA13', 'GNB2L1', 'GNL3', 'GPA33', 'GRB2', 'GRHL2', 'GRHL3', 'GSK3B', 'GSN', 'GSTP1', 'H2AFZ', 'HAVCR2', 'HBEGF', 'HDAC1', 'HDAC2', 'HEPACAM', 'HES1', 'HGF', 'HGS', 'HIF1A', 'HMGA2', 'HNF4A', 'HOXB4', 'HOXD10', 'HPGDS', 'HPGD', 'HRAS', 'HSP90AA1', 'HSPA5', 'ICAM1', 'ID1', 'ID2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP3', 'IL10', 'IL15', 'IL17A', 'IL1B', 'IL24', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IQSEC1', 'IRS1', 'IRS2', 'ITGA5', 'ITGA6', 'ITGAE', 'ITGAM', 'ITGB1', 'ITGB4', 'ITGB7', 'ITPKB', 'IVL', 'JAG1', 'JAK2', 'AJUBA', 'JUN', 'JUP', 'KDM1A', 'KDM6A', 'KDR', 'KEAP1', 'KIFC3', 'KIT', 'KLF4', 'KLF5', 'KLF8', 'KLK3', 'KLK7', 'KLRG1', 'KRAS', 'KRT10', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'KRT9', 'LAMA1', 'LAMB1', 'LAMC2', 'LASP1', 'LATS1', 'LATS2', 'LCN2', 'LEF1', 'LEP', 'LGALS3', 'LGALS4', 'LGALS9', 'LGR5', 'LIF', 'LIMA1', 'LIN28A', 'LIPG', 'LLGL2', 'LMNA', 'LOR', 'LOXL2', 'LOXL3', 'LOX', 'LRP5', 'LRP6', 'LY6K', 'MACC1', 'MACROD1', 'MAD2L2', 'MAGI1', 'MAP2K1', 'MAP2K7', 'MAP4K5', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARK2', 'MARVELD2', 'MCAM', 'MCL1', 'MDM2', 'MED1', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGAT5', 'MGMT', 'MKI67', 'MLH1', 'MLLT4', 'MME', 'MMP11', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP1', 'MMP25', 'MMP27', 'MMP2', 'MMP3', 'MMP7', 'MMP8', 'MMP9', 'MPP5', 'MRAP', 'MSH2', 'MSN', 'MT1G', 'MTA1', 'MTA3', 'MTBP', 'MTDH', 'MTOR', 'MUC1', 'MUC4', 'MYCN', 'MYC', 'MYH6', 'MYO6', 'MYO7A', 'NANOG', 'NCAM1', 'NCOA1', 'NCSTN', 'NDRG1', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEUROG3', 'NF2', 'NFE2L2', 'NFIC', 'NKD2', 'NME1', 'NOG', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NR2F1', 'NRP2', 'NUDT21', 'NUMBL', 'NUMB', 'NUP98', 'NUTF2', 'OTUB1', 'OVOL1', 'OVOL2', 'PARD3', 'PARD6A', 'PAX2', 'PAX5', 'PAX6', 'PAX8', 'PCSK9', 'PDCD4', 'PDGFRB', 'PDPN', 'PEBP1', 'PECAM1', 'PGR', 'PHLPP1', 'PI3', 'PIK3CA', 'PIK3R1', 'PIP5K1A', 'PIP5K1C', 'PIP', 'PIR', 'PITX1', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAUR', 'PLAU', 'PLCD1', 'PLEKHA7', 'PLG', 'PODXL', 'POLR2C', 'POSTN', 'POTEF', 'POU5F1', 'PPARA', 'PPARGC1A', 'PPARG', 'PPL', 'PPP6C', 'PRAME', 'PRDM10', 'PRKAR1A', 'PRKCA', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRKG1', 'PRMT5', 'PROC', 'PROM1', 'PRSS8', 'PSEN1', 'PTCH1', 'PTEN', 'PTF1A', 'PTGS2', 'PTK2', 'PTPN11', 'PTPN14', 'PTPRC', 'PTPRF', 'PTPRJ', 'PTPRM', 'PTPRS', 'PTPRT', 'PTPRU', 'PTRH2', 'PVRL1', 'PVRL2', 'PVR', 'PXN', 'RAB11A', 'RAB25', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RACGAP1', 'RAF1', 'RALA', 'RALBP1', 'RALGDS', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RARB', 'RASSF1', 'RB1', 'RBM4', 'RCOR1', 'RDX', 'REM1', 'RET', 'RHOA', 'RHOB', 'RHOC', 'RHOD', 'RICTOR', 'RND3', 'ROCK1', 'ROCK2', 'RPS6KB1', 'RPTOR', 'RRM2', 'RUNX2', 'RUNX3', 'S100A14', 'S100A4', 'S100A8', 'SATB1', 'SCRIB', 'SDC1', 'SDC4', 'SDHC', 'SELE', 'SELL', 'SELP', 'SEMA3C', 'SEMA3F', 'SENP1', 'SERPINB4', 'SERPINB5', 'SERPINE1', 'SFN', 'SFRP1', 'SFRP2', 'SFTPC', 'SHH', 'SIK1', 'SIN3A', 'SIRT1', 'SIRT2', 'SIRT4', 'SIRT7', 'SIX1', 'SIX2', 'SKIL', 'SKP2', 'SLC2A1', 'SLC39A6', 'SLC6A3', 'SLC9A3R1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SNAI1', 'SNAI2', 'SNAI3', 'SNX16', 'SNX1', 'SOX10', 'SOX17', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPARC', 'SPDEF', 'SPINT1', 'SPP1', 'SPRY1', 'SRCIN1', 'SRC', 'SRXN1', 'ST14', 'ST7L', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STX4', 'STYK1', 'SUCLG2', 'SUMO1', 'SUZ12', 'SYNJ2', 'SYP', 'TACC3', 'TACSTD2', 'TATDN1', 'TBX1', 'TBX3', 'TCF15', 'TCF4', 'TDGF1', 'TERT', 'TET2', 'TFF1', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBI', 'TGFBR1', 'TGFBR2', 'THBS1', 'THEM4', 'THUMPD1', 'THY1', 'TIAM1', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLN1', 'TLR4', 'TMPRSS2', 'TMPRSS4', 'TNFRSF6B', 'TNF', 'TNK2', 'TNS1', 'TP53BP1', 'TP53BP2', 'TP53', 'TRIM21', 'TRIM29', 'TRIM44', 'TRIP10', 'TRPS1', 'TSPYL2', 'TWIST1', 'TWIST2', 'TYRP1', 'T', 'UBE2I', 'UBE2S', 'USP48', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VEZT', 'VHL', 'VIM', 'VIPAS39', 'VPS33B', 'VTN', 'WASL', 'WDFY2', 'WDTC1', 'WIF1', 'WISP1', 'WISP3', 'WNT10A', 'WNT10B', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT9A', 'WNT9B', 'WT1', 'XIAP', 'YAP1', 'YBX1', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.8153569753930732 Spearman Correlation: 0.7398356396697308 Coefficient of Determination: 0.6648059002046217 RMSE: 0.6487804685627887 NRMSE: 0.10407964523346253 MAPE: 361.82202604989703 Pearson Correlation: -0.07891496310855438 Spearman Correlation: 0.24569400190634316 Coefficient of Determination: -9.074063022316293e+20 RMSE: 34660337345.07082 NRMSE: 6155272126.633071 MAPE: 5167077668870.771 Predictor: ElasticNet Pearson Correlation: 0.6796774641676743 Spearman Correlation: 0.6111912556178216 Coefficient of Determination: 0.4198534089270308 RMSE: 0.8535293441626872 NRMSE: 0.13692618018170966 MAPE: 357.8282675943408 Pearson Correlation: 0.5479434780348542 Spearman Correlation: 0.5296458882060286 Coefficient of Determination: 0.24092992214970466 RMSE: 1.0024733262349135 NRMSE: 0.1780275841298017 MAPE: 227.74382969571315 Predictor: RandomForests Pearson Correlation: 0.6231905793996314 Spearman Correlation: 0.517943009334698 Coefficient of Determination: 0.38568492015147104 RMSE: 0.8783046306051617 NRMSE: 0.1409007187944432 MAPE: 215.07319990596793 Pearson Correlation: 0.5834004553417115 Spearman Correlation: 0.6291935616433715 Coefficient of Determination: 0.2963104300780819 RMSE: 0.9652114089415834 NRMSE: 0.1714103017122329 MAPE: 172.927927550685 Protein: CDH2 Protein Interaction Partners Count: 472 x_train_column_count: 466 x_train columns: ['ABCG2', 'ABL1', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTR3', 'ADAM10', 'ADH1A', 'AFP', 'AHSG', 'AKT1', 'AKT3', 'ALB', 'ALCAM', 'ALDH1A1', 'AMBN', 'AMELX', 'AMOTL1', 'AMTN', 'ANGPT1', 'ANO8', 'ANXA5', 'APC2', 'APC', 'APLP2', 'APOA1', 'APOA2', 'APOA5', 'APOB', 'APOE', 'APOL1', 'APPL1', 'APP', 'ARHGAP32', 'ARMC7', 'ARPC5', 'ARVCF', 'AR', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BCL2L1', 'BDNF', 'BMI1', 'BMP15', 'BMP2', 'BMP4', 'BMP7', 'BNIP2', 'BOC', 'BPIFB2', 'RGCC', 'GSKIP', 'C3', 'C4A', 'CABLES1', 'CADM1', 'CALU', 'CASP3', 'CAV1', 'CBLL1', 'CCNA2', 'CCNB1', 'CCND1', 'CD24', 'CD34', 'CD44', 'CD80', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK4', 'CDK5', 'CDK6', 'CDKN2A', 'CDON', 'CDX2', 'CEBPZ', 'CFL1', 'CHGB', 'CHL1', 'CHRDL1', 'CKAP4', 'CLDN11', 'CLDN3', 'CLDN4', 'CLDN7', 'CORT', 'CP', 'CREBBP', 'CRP', 'CSF1', 'CSK', 'CST3', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTTN', 'CXCL12', 'CXCR4', 'CYLD', 'CYR61', 'DBN1', 'DDR1', 'DDR2', 'DKK1', 'DLG4', 'DLG5', 'DMP1', 'DNAJC3', 'DSP', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EFNB2', 'EFNB3', 'EGFR', 'EGF', 'EHMT2', 'EIF2AK3', 'ENAM', 'ENG', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA4', 'EPHB2', 'EPS8', 'ERBB2', 'ERBB4', 'ESR1', 'ESRP1', 'EXOC4', 'EZH2', 'EZR', 'F11R', 'F5', 'EVA1A', 'FAM20A', 'FAM20C', 'FBN1', 'FER', 'FGA', 'FGF13', 'FGF23', 'FGF2', 'FGFR1', 'FGFR4', 'FGG', 'FN1', 'FOXC2', 'FOXD3', 'FOXO1', 'FOXP4', 'FSTL1', 'FSTL3', 'FUCA2', 'GAA', 'GAPDH', 'GAS6', 'GATA4', 'GFAP', 'GJA10', 'GJA1', 'GJA3', 'GJB6', 'GJC1', 'GJC3', 'GJD3', 'GJD4', 'GLI1', 'GOLM1', 'GPC3', 'GRIA1', 'GRIA2', 'HGF', 'HMGA2', 'HNF4A', 'HRAS', 'HRC', 'HSP90B1', 'HSPA5', 'IARS2', 'IGF1R', 'IGF1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL1B', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'INVS', 'IQGAP1', 'ISL1', 'ITGA6', 'ITGB1', 'ITIH2', 'ITPKB', 'JAG1', 'JAM3', 'JUN', 'JUP', 'KCNA5', 'KDR', 'KIAA2022', 'KIF5B', 'KIT', 'KLF4', 'KNG1', 'KRAS', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT8', 'KTN1', 'L1CAM', 'LAMB1', 'LAMB2', 'LAMC1', 'LEF1', 'LGALS1', 'LRP5', 'LRP6', 'LRRC7', 'LTBP1', 'LTBP3', 'MAP1B', 'MAP2K6', 'MAP2K7', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MATN3', 'MBTPS1', 'MCAM', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEPE', 'MET', 'MFGE8', 'MFI2', 'MGAT4A', 'MIA3', 'MKI67', 'MLLT4', 'MMP14', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MPDZ', 'MPP5', 'MRAP', 'MRPL49', 'MSLN', 'MSN', 'MTHFD1', 'MUC1', 'MUC4', 'MXRA8', 'MYC', 'MYO10', 'MZF1', 'NANOG', 'NCAM1', 'NCSTN', 'NDRG1', 'NENF', 'NES', 'NFASC', 'NGF', 'NLGN1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTUM', 'NRCAM', 'NT5C', 'NT5E', 'NTRK2', 'NUCB1', 'NUMBL', 'NUMB', 'OLFM3', 'P4HB', 'PARD3', 'PAX6', 'PCSK9', 'PC', 'PDGFRB', 'PDIA4', 'PDIA6', 'PECAM1', 'PENK', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PITX2', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PNPLA2', 'POU5F1', 'PPT2', 'PRKCDBP', 'PRKCSH', 'PROC', 'PROM1', 'PRPH', 'PRSS23', 'PSEN1', 'PTEN', 'PTK2', 'PTPN11', 'PTPN1', 'PTPN2', 'PTPRC', 'PTPRS', 'PVRL1', 'PVRL2', 'PVRL3', 'PXN', 'QSOX1', 'RAB11FIP1', 'RAB3D', 'RAB5A', 'RAC1', 'RCN1', 'RELN', 'REM1', 'RHOA', 'RHOB', 'RHOC', 'ROBO1', 'PTBP3', 'RPS6KB1', 'RUNX2', 'S100A14', 'S100A4', 'SARS2', 'SCARB2', 'SCG2', 'SCG3', 'SDC2', 'SEMA3A', 'SENP3', 'SERPINA10', 'SERPINA1', 'SERPINC1', 'SERPIND1', 'SERPINE1', 'SHH', 'SHISA5', 'SIRT7', 'SKP1', 'SLC2A1', 'SLC9A3R1', 'SLIT1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SNAI1', 'SNAI2', 'SNAI3', 'SOX10', 'SOX18', 'SOX1', 'SOX2', 'SOX4', 'SOX9', 'SP7', 'SPAG9', 'SPARCL1', 'SPARC', 'SPP1', 'SPP2', 'SRC', 'ST6GALNAC5', 'STAT3', 'STC2', 'SYP', 'TBX1', 'TCF3', 'TEK', 'TF', 'TGFB1', 'TGFBR1', 'TGM2', 'TGOLN2', 'THY1', 'TIMP1', 'TJP1', 'TJP3', 'TMEM132A', 'TNC', 'TNF', 'TNNT1', 'TP53', 'TRPS1', 'TSC2', 'TWIST1', 'TWIST2', 'USP9X', 'VANGL2', 'VCAM1', 'VCAN', 'VCL', 'VEGFA', 'VGF', 'VIM', 'VTN', 'VWA1', 'WFS1', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7A', 'XIRP1', 'ZBTB16', 'ZEB1', 'ZEB2', 'ZSCAN1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.4763103175239093 Spearman Correlation: 0.44166118362398765 Coefficient of Determination: -0.5435252729135427 RMSE: 0.45732049808189407 NRMSE: 0.165707840452893 MAPE: 7413.6952210224745 Pearson Correlation: -0.11754745520931313 Spearman Correlation: 0.04893086921581573 Coefficient of Determination: -3.524205559193531e+24 RMSE: 726660865409.2147 NRMSE: 382821804901.1494 MAPE: 30758883768318.48 Predictor: ElasticNet Pearson Correlation: 0.3531107191359314 Spearman Correlation: 0.35085501922836565 Coefficient of Determination: 0.10183891684380908 RMSE: 0.3488517549613913 NRMSE: 0.12640472315435589 MAPE: 1248.9088646196587 Pearson Correlation: 0.3567211454343816 Spearman Correlation: 0.40350211871615455 Coefficient of Determination: 0.09405238787972126 RMSE: 0.36842805899772957 NRMSE: 0.1940964502640594 MAPE: 238.0810574225873 Predictor: RandomForests Pearson Correlation: 0.40352416477049935 Spearman Correlation: 0.34633496188441887 Coefficient of Determination: 0.12736611640065787 RMSE: 0.3438585532130024 NRMSE: 0.12459546098014437 MAPE: 782.1677638958333 Pearson Correlation: 0.3235572860665259 Spearman Correlation: 0.38058087157676246 Coefficient of Determination: 0.06733967526579365 RMSE: 0.3738203217299347 NRMSE: 0.1969372193902204 MAPE: 156.79749687962033 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.40187188866702045 Spearman Correlation: 0.3866505912605725 Coefficient of Determination: 0.16150101490079805 RMSE: 0.19019618007080322 NRMSE: 0.14314133049664204 MAPE: 369.58755002517563 Pearson Correlation: 0.22344863254766822 Spearman Correlation: 0.24502448049703468 Coefficient of Determination: -0.12054453667407006 RMSE: 0.2095176871535696 NRMSE: 0.17239997297257437 MAPE: 612.9646188853607 Predictor: ElasticNet Pearson Correlation: 0.3238825331251571 Spearman Correlation: 0.3321232880033837 Coefficient of Determination: 0.07574273736865245 RMSE: 0.19968569562597344 NRMSE: 0.1502831242058006 MAPE: 183.82615171606366 Pearson Correlation: 0.10534231497993729 Spearman Correlation: 0.18904392375588666 Coefficient of Determination: -0.13855400665094075 RMSE: 0.21119466731982592 NRMSE: 0.1737798628485361 MAPE: 382.52604089929514 Predictor: RandomForests Pearson Correlation: 0.3457378127819289 Spearman Correlation: 0.3386322421000003 Coefficient of Determination: 0.11697025963020946 RMSE: 0.19518129044630167 NRMSE: 0.14689311631881694 MAPE: 237.74834203687894 Pearson Correlation: 0.11036253238110202 Spearman Correlation: 0.2299232120127502 Coefficient of Determination: -0.17045763300288796 RMSE: 0.2141331862042303 NRMSE: 0.176197799888283 MAPE: 537.1691567278485 Protein: PTEN Protein Interaction Partners Count: 884 x_train_column_count: 875 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ABTB1', 'ACTB', 'ACTG1', 'ADM', 'AEBP1', 'AFP', 'AKT1S1', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'AMHR2', 'ANXA2', 'ANXA5', 'APAF1', 'APC', 'ARAF', 'AREG', 'ARHGAP21', 'ARID1A', 'ARID2', 'ARL2BP', 'AR', 'ATF3', 'ATG12', 'ATG5', 'ATG7', 'ATM', 'ATRX', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'AXL', 'BAD', 'BAG5', 'BARD1', 'BAX', 'BBC3', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BIRC3', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BNIP3', 'BRAF', 'BRCA1', 'BRCA2', 'BRD4', 'BTG2', 'BTK', 'SPRTN', 'CLHC1', 'CA9', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBL', 'CBX7', 'CCL2', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD24', 'CD274', 'CD34', 'CD44', 'CD79A', 'CD79B', 'CDC14A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC7', 'CDH17', 'CDH1', 'CDH2', 'CDIPT', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CENPC', 'CFL1', 'CFLAR', 'CFTR', 'CHD1', 'CHD8', 'CHEK1', 'CHEK2', 'CHKA', 'CHORDC1', 'CHUK', 'CLTCL1', 'CLTC', 'CNOT6L', 'CREB1', 'CREBBP', 'CRP', 'CSF1R', 'CSF1', 'CSK', 'CSN2', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTGF', 'CTLA4', 'CTNNB1', 'CUL1', 'CUL3', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'DAPK1', 'DAXX', 'DBN1', 'DCAF13', 'DDIT4', 'DDR2', 'DECR1', 'DEPTOR', 'DGCR8', 'DICER1', 'DLC1', 'DLG1', 'DLG4', 'DNM1L', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOLPP1', 'DUSP1', 'DUSP6', 'DUT', 'DVL1', 'DYRK1A', 'E2F1', 'E2F2', 'E2F3', 'ECSCR', 'EGFR', 'EGF', 'EGR1', 'EIF2AK2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4EBP2', 'EIF4E', 'EIF4G1', 'EML4', 'ENDOG', 'EP300', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA3', 'EPHA4', 'EPHA5', 'EPHA7', 'EPHB1', 'EPHB2', 'EPHB3', 'EPHB4', 'ERBB2', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ESR1', 'ETS1', 'ETS2', 'ETV1', 'ETV6', 'EYA2', 'EZH2', 'EZR', 'FABP4', 'FASLG', 'FASN', 'FBXW7', 'FCGR1B', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FIG4', 'FKBP1A', 'FLCN', 'FLT1', 'FLT3', 'FLT4', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXG1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FOXP3', 'FRK', 'FYN', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GCK', 'GDF10', 'GDF2', 'GFAP', 'GJA1', 'GLI1', 'GNA11', 'GNAQ', 'GNAS', 'GNRHR', 'GRASP', 'GRB2', 'GRPR', 'GSK3A', 'GSK3B', 'GSTP1', 'H1F0', 'H2AFX', 'HAVCR2', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HES1', 'HGF', 'HIF1A', 'HIST1H2BA', 'HK1', 'HK2', 'HMGA2', 'HNF4A', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA1A', 'HSPA1B', 'HSPA2', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'ID1', 'ID4', 'IDH1', 'IDH2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL17A', 'IL21', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INPP4A', 'INPP4B', 'INPP5A', 'INPP5B', 'INPP5D', 'INPP5E', 'INPP5F', 'INPP5J', 'INPP5K', 'INPPL1', 'INSRR', 'INSR', 'INS', 'IPMK', 'IPO11', 'IQGAP1', 'IRAK1', 'IRS1', 'IRS2', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'ITPR3', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUN', 'KAT2B', 'KDM5B', 'KDM5C', 'KDM6A', 'KDR', 'KEAP1', 'ATG13', 'KIF11', 'KLLN', 'KITLG', 'KIT', 'KLF17', 'KLF2', 'KLF4', 'KLK3', 'KPNA1', 'KPNA2', 'KPNA5', 'KPNA6', 'KPNA7', 'KRAS', 'KRT14', 'KRT5', 'KRT8', 'LASP1', 'LATS1', 'LATS2', 'LCK', 'LDHA', 'LEF1', 'LEP', 'LGALS3', 'LIG4', 'LOX', 'LRIG1', 'LRP1B', 'LRRK2', 'LYN', 'LYPD1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAN2C1', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K3', 'MAP2K4', 'MAP2K7', 'MAP3K1', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK4', 'MAPK6', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAP1', 'MAPT', 'MARCH2', 'MARCH3', 'MAST1', 'MAST2', 'MAST3', 'MAST4', 'MATK', 'MCL1', 'MCM2', 'MCM7', 'MCRS1', 'MDK', 'MDM2', 'MDM4', 'MECOM', 'MECP2', 'MED12', 'MEN1', 'MET', 'MGMT', 'MINPP1', 'MITF', 'MKI67', 'MKRN1', 'MLH1', 'MLH3', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT1', 'MLST8', 'MME', 'MMP2', 'MMP9', 'MOV10', 'MRAP', 'MRE11A', 'MSH2', 'MSH6', 'MTDH', 'MTMR2', 'MTOR', 'MTSS1', 'MUTYH', 'MVP', 'MYCN', 'MYC', 'MYLK', 'MYOCD', 'NANOG', 'NCKAP1', 'NCOA3', 'NCOR2', 'NDFIP1', 'NDFIP2', 'NDRG1', 'NDRG2', 'NEDD4L', 'NEDD4', 'NES', 'NF1', 'NF2', 'NFATC1', 'NFATC4', 'NFE2L2', 'NFKBIA', 'NGFR', 'NLGN3', 'NLGN4X', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR1H4', 'NR3C2', 'NRAS', 'NRP2', 'NTRK1', 'NTRK2', 'NUMB', 'OCRL', 'OLIG2', 'OTUD3', 'PALB2', 'PARD3', 'PARD6A', 'PARD6B', 'PARD6G', 'PARK2', 'PARK7', 'PARP1', 'PAX8', 'PBK', 'PBRM1', 'PCGF2', 'PCSK9', 'PDCD1', 'PDCD4', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PDK1', 'PDK2', 'PDPK1', 'PDZK1', 'PECAM1', 'PGM3', 'PGR', 'PHF6', 'PHLPP1', 'PHLPP2', 'PI3', 'PI4K2A', 'PI4K2B', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIK3R5', 'PIKFYVE', 'PINK1', 'PIP4K2A', 'PIP4K2B', 'PIP4K2C', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PIP5KL1', 'PKM', 'PLCB1', 'PLCB2', 'PLCB3', 'PLCB4', 'PLCD1', 'PLCD3', 'PLCD4', 'PLCE1', 'PLCG1', 'PLCG2', 'PLCH1', 'PLCH2', 'PLCZ1', 'PLEKHA1', 'PLEK', 'PLK1', 'PLK2', 'PLK3', 'BPIFA1', 'PMAIP1', 'PML', 'PMPCA', 'PMS1', 'PMS2', 'POLE', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPM1D', 'PPP2R1A', 'PPP2R4', 'PPP2R5A', 'PPP2R5E', 'PPP3CA', 'PPP6C', 'PRDX1', 'PREX2', 'PRKAA1', 'PRKAA2', 'PRKCI', 'PRKCZ', 'PRKDC', 'PRMT5', 'PROM1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTER', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPMT1', 'PTPN11', 'PTPN12', 'PTPN13', 'PTPN1', 'PTPRC', 'PTPRD', 'PTS', 'PXN', 'RAB7A', 'RAC1', 'RAC2', 'RAD51C', 'RAD51D', 'RAD51', 'RAD52', 'RAF1', 'RASA1', 'RASSF1', 'RB1CC1', 'RB1', 'RBL1', 'RBL2', 'RBM38', 'RBFOX2', 'RCN1', 'RECK', 'RELA', 'REL', 'REM1', 'RETN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'DROSHA', 'RNF146', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KB1', 'RPS6KB2', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'RRM1', 'RSL1D1', 'RUNX3', 'RWDD3', 'SACM1L', 'SALL4', 'SCAI', 'SCGB1D4', 'SCRIB', 'SDHB', 'SDHC', 'SERPINA1', 'SERPINA4', 'SERPINB5', 'SESN1', 'SESN2', 'SETD2', 'SGK1', 'SGK2', 'SGK3', 'SHANK2', 'SHARPIN', 'SHC1', 'SHFM1', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT5', 'SIRT6', 'SIRT7', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC2A4', 'SLC34A2', 'SLC9A3R1', 'SLC9A3R2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNCA', 'SNX27', 'SOCS1', 'SOCS3', 'SOD2', 'SOS1', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPOP', 'SPRY1', 'SPRY2', 'SRBD1', 'SRC', 'SREBF1', 'SRF', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STMN1', 'STUB1', 'STX16', 'SUCLG2', 'SUMO1', 'SYK', 'SYNJ1', 'SYNJ2', 'TACSTD2', 'TBX1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TEP1', 'TERT', 'TET1', 'TGFB1', 'TGFBR1', 'TGFBR2', 'TGM2', 'THBS1', 'TIMP1', 'TIMP3', 'TJP1', 'TLR4', 'TMEM55A', 'TMEM55B', 'TMPRSS2', 'TNFRSF10B', 'TNFSF10', 'TNF', 'TNKS2', 'TNKS', 'TNPO2', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TPM1', 'TRAF6', 'TRIM27', 'TRIM29', 'TSC1', 'TSC2', 'TTN', 'TUT1', 'TWIST1', 'TWSG1', 'TXN', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2E1', 'UBE2I', 'UBE2L3', 'UBE3A', 'ULK1', 'ULK2', 'USP10', 'USP13', 'USP18', 'USP28', 'USP7', 'USP8', 'UTF1', 'UVRAG', 'VCL', 'VDR', 'VEGFA', 'VHL', 'WDR18', 'WDTC1', 'WEE1', 'WIPI1', 'WIPI2', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT9A', 'WNT9B', 'WT1', 'WWP1', 'WWP2', 'XIAP', 'XPO1', 'XPO5', 'YAP1', 'YES1', 'YWHAB', 'YWHAZ', 'YY1', 'ZEB1', 'ZEB2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.6975304030975735 Spearman Correlation: 0.6241597824590449 Coefficient of Determination: 0.48654352413709046 RMSE: 0.44695326362888854 NRMSE: 0.06988558574449043 MAPE: 592.0738834412443 Pearson Correlation: 0.0076509619285115085 Spearman Correlation: 0.22010884479277923 Coefficient of Determination: -1.0286848431831482e+23 RMSE: 164095742285.2808 NRMSE: 55036135727.55595 MAPE: 7179642723311.772 Predictor: ElasticNet Pearson Correlation: 0.48530774347057426 Spearman Correlation: 0.4451828622458516 Coefficient of Determination: 0.1957308170776222 RMSE: 0.5593852480437611 NRMSE: 0.08746544414725371 MAPE: 281.7108759932185 Pearson Correlation: 0.20286647785963732 Spearman Correlation: 0.27032972392937277 Coefficient of Determination: 0.02902266799624742 RMSE: 0.5041510637745265 NRMSE: 0.16908742412614922 MAPE: 353.78317412457375 Predictor: RandomForests Pearson Correlation: 0.49549983561677974 Spearman Correlation: 0.4216736700999412 Coefficient of Determination: 0.145647907257189 RMSE: 0.5765390640947667 NRMSE: 0.09014761380576448 MAPE: 324.5725632680684 Pearson Correlation: 0.1272042253363224 Spearman Correlation: 0.2819393788650908 Coefficient of Determination: 0.003972958416338601 RMSE: 0.5106128112458499 NRMSE: 0.17125463215919304 MAPE: 263.5434083204782 Protein: BRCA2 Protein Interaction Partners Count: 361 x_train_column_count: 351 x_train columns: ['ABL1', 'ACHE', 'ADRB1', 'ADRB2', 'AKT1', 'ALK', 'APEX1', 'ARID1A', 'ARPC1A', 'AR', 'ATAD5', 'ATM', 'ATRIP', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'B3GALTL', 'BACH1', 'BARD1', 'BCCIP', 'BCHE', 'BDNF', 'BECN1', 'BIRC5', 'BLM', 'BMI1', 'BRCA1', 'BRCC3', 'BRE', 'BRIP1', 'SLX4', 'BUB1B', 'BUB1', 'BUB3', 'SFR1', 'RHNO1', 'RMI2', 'BABAM1', 'MMS22L', 'CASC1', 'CASC5', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCNE1', 'CDC25A', 'CDC25C', 'CDC45', 'CDC6', 'CDH1', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CENPE', 'CENPF', 'CEP55', 'CHEK1', 'CHEK2', 'CHRNA1', 'CLSPN', 'CNTROB', 'CREM', 'CSMD3', 'CTNNB1', 'CYP19A1', 'DMC1', 'DNA2', 'DSN1', 'DYNC1LI2', 'EGFR', 'EGF', 'ELAC2', 'EME1', 'EME2', 'ENAM', 'EPCAM', 'ERBB2', 'ERBB3', 'ERCC1', 'ERCC2', 'ERCC4', 'ERCC5', 'ERCC6', 'ERCC8', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM175A', 'FANCA', 'FANCB', 'FANCC', 'FANCD2', 'FANCE', 'FANCF', 'FANCG', 'FANCI', 'FANCL', 'FANCM', 'FBN1', 'FBXO18', 'FBXW7', 'FEN1', 'FGFR2', 'FHIT', 'FLNA', 'FOXM1', 'GAPDH', 'GEN1', 'SLX1B', 'H2AFX', 'HELQ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HMG20A', 'HMG20B', 'HMMR', 'HNRNPC', 'HOXB13', 'HRAS', 'HUS1', 'ITPKB', 'KAT2B', 'KAT5', 'KEAP1', 'SPIDR', 'KIF23', 'KIF4A', 'KIT', 'KLK3', 'KRAS', 'KRT5', 'LIG1', 'LIG3', 'LIG4', 'LIMD1', 'LSP1', 'MAD2L2', 'MAGED1', 'MAMSTR', 'MAP2K2', 'MAP3K1', 'MCM10', 'MCPH1', 'MDC1', 'MDM2', 'MDM4', 'MEN1', 'MGMT', 'MKI67', 'MLH1', 'MLH3', 'KMT2C', 'MND1', 'MORF4L1', 'MRE11A', 'MRPL36', 'MSH2', 'MSH3', 'MSH4', 'MSH5', 'MSH6', 'MTA2', 'FAN1', 'MUC1', 'MUS81', 'MUTYH', 'MYC', 'NBN', 'NCAPG', 'NEDD4', 'NF1', 'NHEJ1', 'NNT', 'NOTCH1', 'NSL1', 'NSMCE4A', 'OBFC1', 'OGG1', 'PALB2', 'PARG', 'PARP1', 'PARP2', 'PARP3', 'PAXIP1', 'PCNA', 'PDLIM7', 'PDS5A', 'PDS5B', 'PGR', 'PIK3CA', 'PLCB4', 'PLEC', 'PLEKHH1', 'PLK1', 'PMS1', 'PMS2', 'PNOC', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'POLN', 'POLQ', 'PRDM9', 'PRKDC', 'PRSS1', 'PSMC3IP', 'PSMD3', 'PSMD6', 'PTEN', 'RAD17', 'RAD18', 'RAD1', 'RAD21', 'RAD23B', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD52', 'RAD54B', 'RAD54L', 'RAD9A', 'RAD9B', 'RAG2', 'RASSF1', 'RBBP8', 'RBMX', 'RECQL4', 'RECQL5', 'RECQL', 'RET', 'REV1', 'REV3L', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RNF168', 'RNF8', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SKP2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCAL1', 'SMARCB1', 'SMC1A', 'SMC2', 'SMC3', 'SMC4', 'SMC5', 'SMC6', 'SMUG1', 'SNAI2', 'SP1', 'SPO11', 'STAT5A', 'STK11', 'STRA13', 'SUV39H1', 'SYCP3', 'TBCE', 'TDP1', 'TERT', 'TEX15', 'TMPRSS2', 'TNS1', 'TOP1', 'TOP2A', 'TOP3A', 'TOP3B', 'TOPBP1', 'TOX3', 'TP53BP1', 'TP53', 'TPX2', 'TRIP12', 'PRSS58', 'TTK', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2D1', 'UBE2E2', 'UBE2E3', 'UBE2N', 'UBE2T', 'UIMC1', 'USF1', 'USP11', 'USP15', 'USP1', 'USP21', 'USP4', 'UVRAG', 'VEGFA', 'VWF', 'WDR48', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WTIP', 'XPA', 'XPO1', 'XRCC1', 'XRCC2', 'XRCC3', 'XRCC4', 'XRCC5', 'XRCC6', 'ZFYVE26', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.3520400735256617 Spearman Correlation: 0.32555536898642534 Coefficient of Determination: -0.5389491047439274 RMSE: 0.24230848231937818 NRMSE: 0.15610145422411223 MAPE: 594.858866806565 Pearson Correlation: -0.10098564985072603 Spearman Correlation: 0.05546814745125354 Coefficient of Determination: -1.2168760480814867e+22 RMSE: 21310947858.94264 NRMSE: 14425313138.528723 MAPE: 769586019441.2651 Predictor: ElasticNet Pearson Correlation: 0.24700390504505965 Spearman Correlation: 0.23043731999779093 Coefficient of Determination: 0.041820906712917605 RMSE: 0.19119645429838922 NRMSE: 0.12317375055460733 MAPE: 158.15084492682104 Pearson Correlation: 0.17862252344213947 Spearman Correlation: 0.16518610384128674 Coefficient of Determination: 0.0115402479229747 RMSE: 0.19206980271344234 NRMSE: 0.1300114413932177 MAPE: 132.41577019461207 Predictor: RandomForests Pearson Correlation: 0.36565073405277315 Spearman Correlation: 0.3110199180983854 Coefficient of Determination: 0.0966168991283044 RMSE: 0.18564893828410808 NRMSE: 0.11959989581839787 MAPE: 164.51560646441754 Pearson Correlation: 0.16533478333709928 Spearman Correlation: 0.20093994744396074 Coefficient of Determination: 0.014596843059850984 RMSE: 0.19177260589762485 NRMSE: 0.12981026980947036 MAPE: 142.573094303078 Protein: CDKN2A Protein Interaction Partners Count: 612 x_train_column_count: 604 x_train columns: ['ABCC1', 'ABL1', 'ACAP1', 'ACAP2', 'ACP5', 'ACTA1', 'ACTB', 'ACTG1', 'ADAMTS9', 'ADAP1', 'AFP', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD12', 'ANXA5', 'AP3D1', 'AP3S1', 'AP3S2', 'APAF1', 'APBA1', 'APBA2', 'ARAP1', 'ARAP2', 'ARF1', 'ARF3', 'ARF4', 'ARF5', 'ARF6', 'ARFGAP1', 'ARFGAP3', 'ARFIP2', 'ARFRP1', 'ARID1A', 'ARID2', 'ARID5B', 'ARL10', 'ARL1', 'ARL2', 'ARL3', 'ARL4A', 'ARL5A', 'AR', 'ASAP1', 'ATM', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'AXIN1', 'BAP1', 'BCL2L11', 'BCL2L1', 'BCL6', 'BECN1', 'BIRC5', 'BMI1', 'BRAF', 'BRCA1', 'BRCA2', 'BUB1B', 'RGCC', 'C1QBP', 'RABL6', 'CACNA1G', 'CADM1', 'CAMK1D', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNL1', 'CD274', 'CD34', 'CD44', 'CDC123', 'CDC20', 'CDC25A', 'CDC25C', 'CDC42', 'CDC45', 'CDC5L', 'CDC6', 'CDC7', 'CDH13', 'CDH17', 'CDH1', 'CDH2', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5RAP3', 'CDK6', 'CDK7', 'CDKAL1', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDX2', 'CEACAM5', 'CEBPB', 'CEBPE', 'CHEK1', 'CHEK2', 'CHFR', 'CHKA', 'COMMD1', 'CRABP1', 'CREBBP', 'CSF1R', 'CSF1', 'CSF2', 'CTBP1', 'CTBP2', 'CTCF', 'CTLA4', 'CTNNB1', 'CTSK', 'CUL1', 'CUL3', 'CXCR4', 'CYCS', 'CYLD', 'CYTH1', 'CYTH2', 'CYTH3', 'DAB2IP', 'DAP', 'DAXX', 'DICER1', 'DIRAS3', 'DLEC1', 'DMTF1', 'DNAH3', 'DNMT1', 'DNMT3A', 'DNMT3B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EBF1', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EP300', 'EPCAM', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ETS1', 'ETV6', 'EWSR1', 'EZH1', 'EZH2', 'FAT1', 'FBXW7', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FKBP2', 'FLT3', 'FMN2', 'FN1', 'FOS', 'FOXA1', 'FOXM1', 'FOXN2', 'FOXO1', 'FOXO3', 'FTO', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GATA4', 'GATA5', 'GBF1', 'GDF15', 'GGA1', 'GGA2', 'GGA3', 'GIT1', 'GIT2', 'GLI1', 'GLTSCR2', 'GMNN', 'GNA11', 'GNAQ', 'GNAS', 'GNL3', 'GOLPH3', 'GP5', 'GSPT1', 'GSTP1', 'H2AFX', 'H2AFZ', 'H3F3A', 'H3F3B', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC9', 'HELLS', 'HGF', 'HHEX', 'HIC1', 'HIF1A', 'HIST1H2BA', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AA3', 'HIST2H2AC', 'HIST2H4A', 'HIST4H4', 'HLTF', 'HMGA2', 'HNF4A', 'HNRNPD', 'HOPX', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA4', 'HSPA9', 'HUWE1', 'ID1', 'IDH1', 'IDH2', 'IGF1R', 'IGF1', 'IGF2BP2', 'IGF2R', 'IGF2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING4', 'INS', 'IQSEC1', 'IRS1', 'ISOC2', 'ITGAM', 'JAK1', 'JAK2', 'JAK3', 'JAZF1', 'JUNB', 'JUN', 'KAT2B', 'KAT5', 'KCNJ11', 'KCNQ1', 'KDM1A', 'KDM2B', 'KDM6A', 'KDM6B', 'KDR', 'KEAP1', 'KIAA1549', 'KIT', 'KLF4', 'KRAS', 'KRT19', 'KRT20', 'KRT5', 'KRT7', 'LATS2', 'LOX', 'LRRK2', 'MACROD2', 'MAF', 'MAP2K1', 'MAP2K4', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MAX', 'MC1R', 'MCL1', 'MCM10', 'MCM2', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEN1', 'MEOX1', 'MEOX2', 'MET', 'MGMT', 'MITF', 'MKRN1', 'MLANA', 'MLH1', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT3', 'MME', 'MMP2', 'MMP7', 'MMP9', 'MOV10', 'MRAS', 'MSH2', 'MSH6', 'MTA1', 'MTAP', 'MTHFR', 'MTNR1B', 'MTOR', 'MUC1', 'MYBL2', 'MYCL', 'MYCN', 'MYC', 'MYOD1', 'KAT6A', 'NANOG', 'NCAM1', 'NCL', 'NCOR1', 'NES', 'NEUROG1', 'NF1', 'NF2', 'NFATC1', 'NFE2L2', 'NME1', 'NOTCH1', 'NOTCH2', 'NPM1', 'NRAS', 'NSUN2', 'ORC4', 'ORC5', 'OSBP2', 'P2RY8', 'PA2G4', 'PALB2', 'PARP1', 'PAX3', 'PAX5', 'PAX8', 'PBRM1', 'PCGF2', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PEX19', 'PGR', 'PHLDB1', 'PI3', 'PIAS2', 'PIGF', 'PIK3CA', 'PIK3R1', 'PIP4K2A', 'PLEKHA3', 'PLEKHA8', 'PLEK', 'PLK1', 'PMAIP1', 'PML', 'PMS2', 'POTEF', 'POU5F1', 'PPARA', 'PPARG', 'PPM1D', 'PPP1R9B', 'PPP3CA', 'PRDM2', 'PRMT6', 'PROM1', 'PRSS1', 'PSMC3', 'PSMD10', 'PSME3', 'PTCH1', 'PTEN', 'PTER', 'PTF1A', 'PTGS2', 'PTPN11', 'PTPRC', 'PTPRD', 'PXN', 'RAB11A', 'RAB5A', 'RABEP1', 'RABGEF1', 'RAC2', 'RAD51', 'RAF1', 'RAP2B', 'RARB', 'RASSF1', 'RASSF2', 'RB1', 'RBL1', 'RBL2', 'RCC1', 'RELA', 'RELB', 'REL', 'RET', 'RHOA', 'DROSHA', 'RNF2', 'RNF43', 'ROS1', 'RPL11', 'RPRM', 'RPS27A', 'RPS6KB1', 'RRAS2', 'RRAS', 'RTEL1', 'RUNX2', 'RUNX3', 'SDHC', 'SENP1', 'SENP3', 'SERPINE1', 'SERTAD1', 'SETD2', 'SFN', 'SFRP1', 'SFRP2', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SIX2', 'SKP2', 'SLC30A8', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SNAI1', 'SNAI2', 'SNCA', 'SOCS1', 'SOX2', 'SP1', 'SPEN', 'SRC', 'STAT1', 'STAT3', 'STK11', 'STK25', 'STK33', 'STMN1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUV39H1', 'SUZ12', 'SYNE1', 'SYP', 'TBL1XR1', 'TBRG1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TERT', 'TET2', 'TFDP1', 'TFPI2', 'TGFBR2', 'THADA', 'THBS1', 'TIMP3', 'TMCO1', 'TMEM115', 'TNFRSF10B', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TRADD', 'TRIM28', 'TRIP12', 'PRSS58', 'TSC2', 'TSPAN8', 'TTF1', 'TWIST1', 'TWSG1', 'TYR', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2I', 'UBE3A', 'UCHL1', 'USP7', 'UTF1', 'VEGFA', 'VHL', 'WDTC1', 'WEE1', 'WFS1', 'WHSC1', 'WIF1', 'WRN', 'WT1', 'WWOX', 'XRCC1', 'YY1', 'ZBTB17', 'ZBTB7A', 'ZEB1', 'ZFP91', 'ZNF148', 'ZNF217', 'ZNF227', 'ZNF410', 'ZNF420', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.634236233410181 Spearman Correlation: 0.5705162314059501 Coefficient of Determination: 0.36537979278376453 RMSE: 0.5284408841451479 NRMSE: 0.11946216438230989 MAPE: 507.99746645978274 Pearson Correlation: -0.08312143417189312 Spearman Correlation: 0.13973735831430995 Coefficient of Determination: -3.454782182829202e+24 RMSE: 1251711625694.0325 NRMSE: 338154210528.96924 MAPE: 365855452112947.0 Predictor: ElasticNet Pearson Correlation: 0.5277873959569095 Spearman Correlation: 0.4371814475420451 Coefficient of Determination: 0.2571124141686426 RMSE: 0.5717432062127084 NRMSE: 0.129251318235042 MAPE: 252.98684073116274 Pearson Correlation: 0.3363744628490139 Spearman Correlation: 0.30669690761876894 Coefficient of Determination: 0.10046123244624205 RMSE: 0.6387102603471859 NRMSE: 0.1725497785679668 MAPE: 170.2035513460707 Predictor: RandomForests Pearson Correlation: 0.4985564834118414 Spearman Correlation: 0.36350514863356104 Coefficient of Determination: 0.21197639501693744 RMSE: 0.5888559608326609 NRMSE: 0.1331199188047159 MAPE: 196.48617630243763 Pearson Correlation: 0.2940233999617019 Spearman Correlation: 0.2811578093844585 Coefficient of Determination: 0.07957202922449202 RMSE: 0.6460838039727979 NRMSE: 0.17454176679619565 MAPE: 227.52686453315647 Protein: TP53 Protein Interaction Partners Count: 1000 x_train_column_count: 990 x_train columns: ['ABCB1', 'ABCC1', 'ABL1', 'ACTB', 'ACTL6A', 'ADAM17', 'AFP', 'AGT', 'AICDA', 'AIFM2', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD2', 'ANXA1', 'ANXA2', 'ANXA5', 'APAF1', 'APBB1', 'APC', 'APEX1', 'APOBEC3B', 'APP', 'ARID1A', 'ARID3A', 'AR', 'ASF1A', 'ASXL1', 'ATF2', 'ATF3', 'ATG7', 'ATM', 'ATN1', 'ATRIP', 'ATRX', 'ATR', 'ATXN3', 'AURKA', 'AURKB', 'AXIN1', 'AXL', 'BACE1', 'BAG1', 'BAG2', 'BAIAP2L1', 'BAK1', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2A1', 'BCL2L11', 'BCL2L12', 'BCL2L14', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BID', 'BIRC3', 'BIRC5', 'BIRC6', 'BLM', 'BMF', 'BMI1', 'BMX', 'BNIP3L', 'BNIP3', 'BRCA1', 'BRCA2', 'BRCC3', 'BRD1', 'BRD4', 'BRD7', 'BRE', 'BRIP1', 'BRPF1', 'BRPF3', 'BTG2', 'BTK', 'BUB1B', 'BUB1', 'RHNO1', 'RGCC', 'RMI2', 'CNOT11', 'SETD9', 'CA9', 'CABIN1', 'CABLES1', 'CAPN1', 'CARM1', 'CASP10', 'CASP1', 'CASP2', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBX2', 'CBX4', 'CBX6', 'CBX8', 'CCDC106', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNG2', 'CCNH', 'CCNK', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CD24', 'CD274', 'CD34', 'CD40LG', 'CD40', 'CD44', 'CD82', 'CDC20', 'CDC25A', 'CDC25C', 'CDH17', 'CDH1', 'CDK12', 'CDK13', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CEACAM5', 'CEBPB', 'CENPJ', 'CFL1', 'CFLAR', 'CHD3', 'CHD4', 'CHD8', 'CHEK1', 'CHEK2', 'CHUK', 'CISH', 'CITED2', 'CLSPN', 'CLU', 'CNOT10', 'CNOT1', 'CNOT2', 'CNOT3', 'CNOT4', 'CNOT6L', 'CNOT6', 'CNOT7', 'CNOT8', 'COPS5', 'CREB1', 'CREBBP', 'CRYAB', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK1G1', 'CSNK1G2', 'CSNK1G3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTCF', 'CTGF', 'CTNNB1', 'CUL4A', 'CUL7', 'CUL9', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP1A1', 'DACH1', 'DAPK1', 'DAP', 'DAXX', 'DDB1', 'DDB2', 'DDIT4', 'DDX17', 'DDX3X', 'DDX5', 'DECR1', 'DGCR8', 'DHCR24', 'DHFR', 'DIABLO', 'DICER1', 'DKK1', 'DMTF1', 'DNA2', 'DNAJA3', 'DNAJB1', 'DNMT1', 'DNMT3A', 'DNTT', 'DPYD', 'DRAM1', 'DTL', 'DUSP1', 'DUSP2', 'DYRK1A', 'DYRK2', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EEF1A1', 'EEF1A2', 'EGFR', 'EGF', 'EGR1', 'EHMT1', 'EHMT2', 'EI24', 'EIF2AK2', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4EBP1', 'ELANE', 'ELAVL1', 'ELL3', 'ELL', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHA3', 'EPHB2', 'ERBB2', 'ERBB4', 'ERCC1', 'ERCC2', 'ERCC3', 'ERCC6', 'ESR1', 'ETS1', 'ETS2', 'EWSR1', 'EXO1', 'EZH2', 'F2', 'FADD', 'AMER1', 'FAM175B', 'FANCC', 'FANCD2', 'FASLG', 'FAS', 'FBL', 'FBXO11', 'FBXO4', 'FBXW7', 'FGF1', 'FGF2', 'FGFR3', 'FHIT', 'FHL2', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FSCN1', 'FUT4', 'FZR1', 'G3BP1', 'G6PD', 'GADD45A', 'GADD45B', 'GADD45G', 'GAPDH', 'GATAD2A', 'GATAD2B', 'GDF15', 'GFI1', 'GLS2', 'GLTSCR2', 'GNL3', 'GRAMD4', 'GRB10', 'GRB14', 'GSK3B', 'GSTP1', 'GTF2H1', 'GTSE1', 'H1F0', 'H2AFX', 'HAMP', 'HCK', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC5', 'HDAC7', 'HDAC8', 'HDAC9', 'HERC5', 'HIC1', 'HIF1A', 'HIPK1', 'HIPK2', 'HIPK3', 'HIPK4', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HK2', 'HMGA1', 'HMGA2', 'HMGB1', 'HMGB2', 'HMMR', 'HMOX1', 'HNF4A', 'HNRNPK', 'HNRNPL', 'HOXA5', 'HPGDS', 'HRAS', 'HSF1', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA1A', 'HSPA1B', 'HSPA1L', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'HSPB1', 'HSPB2', 'HTT', 'HUS1', 'HUWE1', 'ICAM1', 'ID2', 'ID4', 'IDH1', 'IDH2', 'IFI16', 'IFNAR1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IGFBP7', 'IKBKB', 'IL17A', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING2', 'ING3', 'ING4', 'ING5', 'INSIG1', 'INS', 'IRF1', 'ISG15', 'ITPKB', 'JAG1', 'JAK2', 'JMY', 'JUN', 'KAT2A', 'KAT2B', 'KAT5', 'KDM1A', 'KDM6A', 'KDM6B', 'KDR', 'KHDRBS1', 'CCAR2', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KPNA2', 'KRAS', 'KRT14', 'KRT17', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'L3MBTL1', 'LAMA4', 'LEP', 'LGALS7B', 'LGALS7', 'LIF', 'LIG4', 'LIN28A', 'PIDD1', 'LRRK2', 'LYN', 'MAF1', 'MAF', 'MAGEA2', 'MAP1LC3B', 'MAP2K1', 'MAP2K3', 'MAP2K7', 'MAP3K1', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MBD3', 'MCL1', 'MCM7', 'MDC1', 'MDH1', 'MDM2', 'MDM4', 'MEAF6', 'MECOM', 'MELK', 'MET', 'MGMT', 'MIF', 'MKI67', 'MKRN1', 'MLH1', 'KMT2D', 'KMT2C', 'MMP13', 'MMP1', 'MMP2', 'MMP9', 'MOV10', 'MRE11A', 'MSH2', 'MSH6', 'MSX1', 'MT1A', 'MT2A', 'MTA1', 'MTA2', 'MTA3', 'MTOR', 'MUC1', 'MUTYH', 'MYBBP1A', 'MYB', 'MYCN', 'MYC', 'MYOCD', 'KAT8', 'KAT6A', 'NANOG', 'NBN', 'NCL', 'NCOA3', 'NCOR1', 'NCOR2', 'NDN', 'NDRG1', 'NEDD8', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFE2L2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NFKBIB', 'NFYA', 'NFYB', 'NFYC', 'NGFR', 'NLK', 'NLRC4', 'NME1', 'NOC2L', 'NOS3', 'NOTCH1', 'NOTCH3', 'NOTCH4', 'NOX4', 'NPM1', 'NQO1', 'NR1I2', 'NR2E1', 'NR3C1', 'NR4A1', 'NR4A2', 'NRAS', 'NUAK1', 'NUMB', 'NUPR1', 'OGG1', 'OLIG2', 'OPN1SW', 'OSGIN1', 'OTUB1', 'OTUB2', 'OTUD5', 'PADI4', 'PALB2', 'PARK2', 'PARK7', 'PARP1', 'PATZ1', 'PAX2', 'PAX3', 'PAX8', 'PBK', 'PBRM1', 'PCBP4', 'PCNA', 'PDCD4', 'PDCD5', 'PDGFRA', 'PDGFRB', 'PDLIM7', 'PER2', 'PERP', 'PGR', 'PHB', 'PHC1', 'PHC2', 'PHC3', 'PHF20', 'PHGDH', 'PI3', 'PIAS1', 'PIAS2', 'PIAS4', 'PIK3CA', 'PIN1', 'PKM', 'PLAGL1', 'PLAU', 'PLK1', 'PLK2', 'PLK3', 'PLK4', 'PMAIP1', 'PML', 'PMS2', 'POLI', 'POLK', 'POU4F1', 'POU4F2', 'POU5F1', 'PPARGC1A', 'PPARG', 'PPIF', 'PPM1D', 'PPP1R13B', 'PPP1R13L', 'PPP1R15A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R4', 'PPP2R5C', 'PRDM1', 'PRDM2', 'PRDX1', 'PRELID1', 'PRIMA1', 'PRKAA1', 'PRKAA2', 'PRKAB1', 'PRKAB2', 'PRKAG1', 'PRKAG2', 'PRKAG3', 'PRKCA', 'PRKCD', 'PRKCZ', 'PRKD1', 'PRKDC', 'PRKG1', 'PRMT1', 'PRMT5', 'PROM1', 'PSEN1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTBP1', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2', 'PTTG1', 'RABGGTA', 'RABGGTB', 'RAD17', 'RAD1', 'RAD50', 'RAD51', 'RAD9A', 'RAD9B', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP4', 'RBBP6', 'RBBP7', 'RBBP8', 'RBL1', 'RBL2', 'RBM38', 'RBPJ', 'RCHY1', 'RCOR1', 'RECQL4', 'RELA', 'REM1', 'REST', 'RET', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RFFL', 'RFWD2', 'RING1', 'RMI1', 'DROSHA', 'RNF20', 'RNF2', 'RNF34', 'RNF43', 'ROCK1', 'RPA1', 'RPA2', 'RPA3', 'RPL11', 'RPL22', 'RPL26', 'RPL5', 'RPRM', 'RPS14', 'RPS19', 'RPS27A', 'RPS27L', 'RPS3', 'RPS6KB1', 'RQCD1', 'RRAD', 'RRM2B', 'RRM2', 'RUNX2', 'RUNX3', 'S100A2', 'S100A4', 'S100A6', 'S100B', 'SALL4', 'SCO2', 'SDHC', 'SENP1', 'SENP3', 'SERPINB5', 'SERPINE1', 'SESN1', 'SESN2', 'SESN3', 'SETD2', 'SETD7', 'SETD8', 'SETDB1', 'SFN', 'SRSF1', 'SGK1', 'SHFM1', 'SHH', 'SHISA5', 'SIK1', 'SIN3A', 'SIN3B', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SKP2', 'SLC2A14', 'SLC2A1', 'SLC2A2', 'SLC2A3', 'SLC6A6', 'SLMO1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMG1', 'SMG7', 'SMYD2', 'SNAI1', 'SNAI2', 'SOCS1', 'SOCS3', 'SOD2', 'SORT1', 'SOX2', 'SOX4', 'SP100', 'SP1', 'SP3', 'SP7', 'SPATA18', 'SPP1', 'SQSTM1', 'SRC', 'SREBF1', 'SREBF2', 'SSRP1', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STEAP3', 'STK11', 'STMN1', 'STUB1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUMO4', 'SUPT16H', 'SUV39H1', 'SUZ12', 'SYK', 'SYP', 'TADA3', 'TAF10', 'TAF11', 'TAF12', 'TAF13', 'TAF15', 'TAF1L', 'TAF1', 'TAF2', 'TAF3', 'TAF4B', 'TAF4', 'TAF5', 'TAF6', 'TAF7L', 'TAF7', 'TAF9B', 'TBPL1', 'TBPL2', 'TBP', 'TCHP', 'TCP1', 'TDG', 'TERT', 'TET2', 'TFAM', 'TFAP2A', 'TFAP2C', 'TFDP1', 'TFF1', 'TGFB1', 'TGM2', 'THBS1', 'TIMP3', 'TLR3', 'TLR9', 'TMEM219', 'TNFAIP3', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF10C', 'TNFRSF10D', 'TNF', 'TNK2', 'TNKS1BP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOE1', 'TOP1', 'TOP2A', 'TOP3A', 'TOPBP1', 'TOPORS', 'TP53AIP1', 'TP53BP1', 'TP53BP2', 'TP53I3', 'TP53INP1', 'TP53RK', 'TP63', 'TP73', 'TPT1', 'TPX2', 'TRAF6', 'TRIAP1', 'TRIM24', 'TRIM28', 'TRIM29', 'TRIM32', 'TRIM59', 'TRIM8', 'TRRAP', 'TSC2', 'TTC5', 'TTK', 'TWIST1', 'TWIST2', 'TXN', 'TYMS', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2D1', 'UBE2E1', 'UBE2I', 'UBE2K', 'UBE2N', 'UBE2Q1', 'UBE2S', 'UBE3A', 'UBN1', 'UCHL1', 'UHRF1', 'USF1', 'USP10', 'USP15', 'USP24', 'USP3', 'USP42', 'USP7', 'UTP14A', 'VEGFA', 'VHL', 'VPRBP', 'VRK1', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WWOX', 'XAF1', 'XIAP', 'XPA', 'XPO1', 'XRCC1', 'XRCC5', 'XRCC6', 'YBX1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'YY1', 'YY2', 'ZBTB33', 'ZBTB7A', 'ZEB1', 'ZEB2', 'ZKSCAN4', 'ZNF148', 'ZNF274', 'ZNF385A', 'ZNF420', 'ZNF668', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 0.7148404898757935 Spearman Correlation: 0.6299638984836736 Coefficient of Determination: 0.5091553155164922 RMSE: 0.31900021927966665 NRMSE: 0.08544267290201331 MAPE: 432.8948118388706 Pearson Correlation: -0.08786500913195416 Spearman Correlation: 0.12459392239591863 Coefficient of Determination: -4.626405822404908e+22 RMSE: 88054627064.92873 NRMSE: 28998724539.742702 MAPE: 36269887984203.375 Predictor: ElasticNet Pearson Correlation: 0.513831314887253 Spearman Correlation: 0.49737317675033327 Coefficient of Determination: 0.24421461891531482 RMSE: 0.3958386338604377 NRMSE: 0.10602347230760352 MAPE: 274.37440087327457 Pearson Correlation: 0.3892895159212058 Spearman Correlation: 0.37203687445127304 Coefficient of Determination: 0.14527005095943146 RMSE: 0.3784816077723403 NRMSE: 0.1246440335163314 MAPE: 2395.6865362646317 Predictor: RandomForests Pearson Correlation: 0.4729742275505716 Spearman Correlation: 0.48631788802155684 Coefficient of Determination: 0.21718966309658194 RMSE: 0.40285356514095844 NRMSE: 0.10790238787758362 MAPE: 382.01931242401946 Pearson Correlation: 0.34594373091317066 Spearman Correlation: 0.32437021165444524 Coefficient of Determination: 0.10656743727238971 RMSE: 0.3869556637349517 NRMSE: 0.12743476493823536 MAPE: 2233.8571859785043 Protein: CTNNB1 Protein Interaction Partners Count: 992 x_train_column_count: 983 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACAN', 'ACP1', 'ACTA1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTN4', 'ACVR1B', 'ACVR1', 'ADAM10', 'ADCY7', 'ADIPOQ', 'AES', 'AFP', 'AHI1', 'AHR', 'AHSA1', 'AJAP1', 'AK9', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'ALPL', 'AMHR2', 'AMH', 'ANXA5', 'AP1M1', 'APC2', 'APCS', 'APC', 'APH1A', 'APH1B', 'AQP1', 'ARHGAP10', 'ARHGAP21', 'ARHGAP32', 'ARHGEF4', 'ARID1A', 'ARID2', 'ARMC7', 'ARMC8', 'ARVCF', 'ARX', 'AR', 'ASCL1', 'ASF1A', 'ASH2L', 'ASIP', 'ATF4', 'ATM', 'AURKA', 'AXIN1', 'AXIN2', 'BAG3', 'BCAR1', 'BCL2L1', 'BCL3', 'BCL6', 'BCL9L', 'BCL9', 'BDNF', 'BGLAP', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BMPR1B', 'BNIP2', 'BRAF', 'BRCA1', 'BRCA2', 'BRMS1L', 'BTRC', 'HILPDA', 'AK8', 'CA2', 'CA9', 'CABLES1', 'CACYBP', 'CALM1', 'CALM3', 'CARM1', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBLL1', 'CBL', 'CBY1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CD24', 'CD34', 'CD40', 'CD44', 'CDC27', 'CDC42', 'CDC73', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH16', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH26', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDHR5', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK8', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDON', 'CDX1', 'CDX2', 'CEBPA', 'CHD8', 'CHRD', 'CHUK', 'CITED1', 'CKAP5', 'CLCA1', 'CLDN3', 'CLDN5', 'COL1A1', 'COPS3', 'COPS5', 'COPS6', 'CREB1', 'CREBBP', 'CRKL', 'CRK', 'CRP', 'CRYAB', 'CSNK1A1L', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK2A3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNAL1', 'CTNNBIP1', 'CTNND1', 'CTNND2', 'CTTN', 'CUL1', 'CUL4A', 'CUL4B', 'CXCR4', 'CXXC4', 'DAB2', 'DACT1', 'DACT2', 'DACT3', 'DCT', 'DCX', 'DDB1', 'DDX39A', 'DDX3X', 'DDX5', 'DHODH', 'DHX9', 'DKK1', 'DKK2', 'DKK3', 'DKK4', 'DLG1', 'DLG2', 'DLG4', 'DLG5', 'DLGAP1', 'DLL4', 'DLX1', 'DNM2', 'DNMT1', 'DPYD', 'DSC1', 'DSC2', 'DSC3', 'DSG1', 'DSG2', 'DSG3', 'DSG4', 'DSP', 'DUSP6', 'DVL1', 'DVL2', 'DVL3', 'E2F3', 'ECM1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'ELAVL1', 'EMD', 'ENAH', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHB2', 'EPHB3', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EXOC3', 'EXOC4', 'EYA4', 'EZH2', 'EZR', 'F2RL2', 'FAF1', 'AMER1', 'FANCA', 'FASLG', 'FAS', 'FAT1', 'FAT4', 'FBXW11', 'FBXW7', 'FERMT2', 'FER', 'FGF10', 'FGF13', 'FGF2', 'FGF3', 'FGF4', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FLT3', 'FMN1', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC2', 'FOXG1', 'FOXL1', 'FOXL2', 'FOXM1', 'FOXN3', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FRAT1', 'FRAT2', 'FRZB', 'FSCN1', 'FSTL1', 'FSTL3', 'FURIN', 'FUS', 'FXR1', 'FYN', 'FZD10', 'FZD1', 'FZD2', 'FZD3', 'FZD4', 'FZD5', 'FZD6', 'FZD7', 'FZD8', 'FZD9', 'GAPDH', 'GATA2', 'GATA4', 'GCG', 'GDF2', 'GDNF', 'GFRA1', 'GJA1', 'GLI1', 'GLI2', 'GLI3', 'GLIS2', 'GLUL', 'GNA11', 'GNA12', 'GNA13', 'GNAQ', 'GNAS', 'GPC3', 'GRIA2', 'GRIP1', 'GSK3A', 'GSK3B', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HAS2', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC7', 'HERC5', 'HES7', 'HGF', 'HGS', 'HHEX', 'HIC1', 'HIF1A', 'HINT1', 'HIPK2', 'HIST1H1C', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HMGB1', 'HNF1A', 'HNF4A', 'HNRNPA1', 'HNRNPA2B1', 'HNRNPK', 'HNRNPM', 'HOXA10', 'HOXB4', 'HPGD', 'HRAS', 'HSP90AB1', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPD1', 'HTRA1', 'HTT', 'HUWE1', 'IBSP', 'IDH1', 'IDH2', 'IFNB1', 'IFRD1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP4', 'IHH', 'IKBKB', 'IL6', 'CXCL8', 'ILK', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IRF3', 'ISG15', 'ISL1', 'ITGAE', 'ITGB1', 'ITGB7', 'ITK', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'AJUBA', 'JUN', 'JUP', 'KANK1', 'KAT2A', 'KAT2B', 'KAT5', 'KCNN1', 'KCTD1', 'KDM1A', 'KDR', 'KIF18B', 'KIF3A', 'KIF5B', 'KIFC3', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KRAS', 'KREMEN1', 'KRIT1', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LATS2', 'LDB1', 'LDHB', 'LDLR', 'LEF1', 'LEO1', 'LGR4', 'LGR5', 'LGR6', 'LHCGR', 'LHX8', 'LIF', 'LIMA1', 'LMNA', 'LMNB1', 'LOX', 'LRP4', 'LRP5L', 'LRP5', 'LRP6', 'LRRFIP1', 'LRRK2', 'LZTFL1', 'MACF1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8IP1', 'MAPK8', 'MAPK9', 'MDFIC', 'MDFI', 'MDK', 'MDM2', 'MED12', 'MED1', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'KMT2D', 'MLLT10', 'MLLT11', 'MLLT4', 'MLLT6', 'KMT2A', 'MME', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP25', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MRAP', 'MSH2', 'MSH6', 'MSN', 'MSX1', 'MSX2', 'MTDH', 'MTOR', 'MUC13', 'MUC1', 'MUTYH', 'MYCN', 'MYC', 'MYF5', 'MYO1D', 'MYO6', 'MYO7A', 'MYOD1', 'MYOG', 'NANOG', 'NCAM1', 'NCCRP1', 'NCOA2', 'NCSTN', 'NDP', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEURL2', 'NF1', 'NF2', 'NFAT5', 'NFKB1', 'NIT1', 'NKD1', 'NLK', 'NME1', 'NOG', 'NONO', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR0B1', 'NR4A1', 'NR4A2', 'NR5A1', 'NR5A2', 'NRAS', 'NRIP1', 'NTRK1', 'NTRK2', 'NTRK3', 'NUDT5', 'NUMB', 'NUP153', 'NUTF2', 'OTX2', 'PAK1', 'PAK2', 'PAK3', 'PANK4', 'PARD3', 'PARD6A', 'PARK2', 'PARP1', 'PAX3', 'PAX6', 'PAX7', 'PAX8', 'PDGFRA', 'PDGFRB', 'PECAM1', 'PGK1', 'PGR', 'PHB', 'JADE1', 'PI3', 'PICK1', 'PIK3CA', 'PIK3R1', 'PIK3R2', 'PIN1', 'PIP5K1A', 'PIP5K1C', 'PITX2', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAG1', 'PLEKHA7', 'PLK1', 'PML', 'PMS2', 'POLE', 'PORCN', 'POTEF', 'POU5F1', 'PPARD', 'PPARG', 'PPM1A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R2B', 'PPP2R5A', 'PPP2R5B', 'PPP2R5C', 'PPP2R5D', 'PPP2R5E', 'PRKACA', 'PRKACB', 'PRKACG', 'PRKAR1A', 'PRKCA', 'PRKCG', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRL', 'PRMT1', 'PROC', 'PROM1', 'PROP1', 'PSEN1', 'PSEN2', 'PSENEN', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTEN', 'PTGES3', 'PTGS2', 'PTH1R', 'PTH', 'PTK2', 'PTK7', 'PTMA', 'PTN', 'PTPN11', 'PTPN13', 'PTPN1', 'PTPN6', 'PTPRB', 'PTPRC', 'PTPRF', 'PTPRG', 'PTPRJ', 'PTPRK', 'PTPRM', 'PTPRU', 'PTPRZ1', 'PVRL1', 'PVRL2', 'PXN', 'PYGO1', 'PYGO2', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RALGDS', 'RANBP3', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RAPGEF2', 'RAPGEF6', 'RAPSN', 'RARA', 'RARB', 'RARG', 'RARS', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP5', 'RBMX', 'RBPJ', 'RBX1', 'RELA', 'REM1', 'RET', 'RHOA', 'RIPK2', 'RNF220', 'RNF43', 'ROBO1', 'ROCK1', 'ROCK2', 'ROR2', 'RPRD1A', 'RPS27A', 'RPSA', 'RSPO1', 'RSPO2', 'RSPO3', 'RSPO4', 'RUNX2', 'RUNX3', 'RUVBL1', 'RUVBL2', 'RXRA', 'RYK', 'S100A4', 'S100A6', 'SALL1', 'SALL4', 'SATB1', 'SCRIB', 'SDHC', 'SERPINE1', 'SETD2', 'SETD7', 'SFN', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHFM1', 'SHH', 'SIAH1', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT6', 'SKP1', 'SLC6A3', 'SLC9A3R1', 'SLCO1B3', 'SLCO2A1', 'SLIT1', 'SLK', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD5', 'SMAD7', 'SMAD9', 'SMARCA2', 'SMARCA4', 'SMARCA5', 'SMARCB1', 'SMO', 'SMURF1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNX1', 'SOST', 'SOX10', 'SOX13', 'SOX17', 'SOX1', 'SOX2', 'SOX3', 'SOX4', 'SOX6', 'SOX7', 'SOX8', 'SOX9', 'SP1', 'SP7', 'SPAG9', 'SPATA13', 'SPEN', 'SPN', 'SPP1', 'SRC', 'STAT3', 'STK11', 'STRAP', 'STX4', 'SUFU', 'SUV39H1', 'SYP', 'TADA3', 'TAX1BP3', 'TAZ', 'TBL1XR1', 'TBL1X', 'TBX5', 'TBX6', 'TCF12', 'TCF3', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TFAP2A', 'TFCP2', 'TFF1', 'TFF2', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBR1', 'TGFBR2', 'TGM2', 'TJP1', 'TJP2', 'TLE1', 'TLE2', 'TLE3', 'TLE4', 'TNFRSF11B', 'TNFSF11', 'TNF', 'TNIK', 'TNKS2', 'TNKS', 'TNS1', 'TOB1', 'TOP2A', 'TP53', 'TRAF4', 'TRIM33', 'TRIM37', 'TRIP10', 'TRRAP', 'TSC2', 'TUBA1A', 'TWIST1', 'TYMS', 'T', 'UBA52', 'UBB', 'UBC', 'UBE2B', 'UBE2R2', 'UBE3A', 'UBR5', 'UCHL1', 'UMPS', 'UPRT', 'USP4', 'USP7', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VAV2', 'VAV3', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VHL', 'VIM', 'WDR64', 'WDTC1', 'WHSC1', 'WIF1', 'WISP1', 'WLS', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'WWTR1', 'XPO1', 'YAP1', 'YARS', 'YEATS4', 'YES1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'ZAP70', 'ZAR1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZIC3', 'ZNRF3', 'ZYX', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.8387209263542886 Spearman Correlation: 0.8127666292430894 Coefficient of Determination: 0.7034442600867612 RMSE: 0.39480381596778863 NRMSE: 0.0776561400408711 MAPE: 558.477862916726 Pearson Correlation: -0.006789011469470147 Spearman Correlation: 0.30245208681826175 Coefficient of Determination: -1.5970144947156455e+21 RMSE: 30632748438.426872 NRMSE: 7623689912.751518 MAPE: 2343588350526.2114 Predictor: ElasticNet Pearson Correlation: 0.5903393003120941 Spearman Correlation: 0.5419064471646445 Coefficient of Determination: 0.31565233548071603 RMSE: 0.5997449078293456 NRMSE: 0.1179671337193835 MAPE: 404.85849297067534 Pearson Correlation: 0.38410997839884814 Spearman Correlation: 0.4115696029655644 Coefficient of Determination: 0.0374025173064495 RMSE: 0.7520624346252504 NRMSE: 0.18716867042265012 MAPE: 198.03954948688644 Predictor: RandomForests Pearson Correlation: 0.4599288766856552 Spearman Correlation: 0.41017117193161046 Coefficient of Determination: 0.14781184593840602 RMSE: 0.6692616210199389 NRMSE: 0.13164075944530665 MAPE: 612.0329924292948 Pearson Correlation: 0.30809101773688763 Spearman Correlation: 0.33235294117647063 Coefficient of Determination: -0.02838945424285022 RMSE: 0.7773387948943024 NRMSE: 0.19345929541183704 MAPE: 291.2004797111466 Protein: CCNE1 Protein Interaction Partners Count: 350 x_train_column_count: 347 x_train columns: ['ABL1', 'AKT1', 'AKT2', 'AKT3', 'ALDH18A1', 'ANAPC10', 'ANAPC13', 'ANAPC1', 'ANAPC2', 'ANAPC4', 'ANAPC5', 'ANAPC7', 'ANXA5', 'ARID1A', 'AR', 'ATM', 'AURKA', 'AURKB', 'BARD1', 'BCL2L1', 'BIRC5', 'BRCA1', 'BRCA2', 'BTG2', 'BTRC', 'BUB1B', 'BUB1', 'BUB3', 'RGCC', 'MLIP', 'CABLES1', 'CALM1', 'CAPRIN1', 'CASP3', 'CASP9', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNF', 'CCNG1', 'CCNH', 'CCNK', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CDC16', 'CDC20', 'CDC23', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC26', 'CDC27', 'CDC45', 'CDC6', 'CDC7', 'CDCA2', 'CDCA5', 'CDCA8', 'CDH1', 'CDK12', 'CDK13', 'CDK14', 'CDK15', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CENPA', 'CENPE', 'CHAF1A', 'CHD1L', 'CHEK1', 'CHEK2', 'CINP', 'CKS1B', 'CKS2', 'COPS5', 'CREBBP', 'CSK', 'CTNNB1', 'CUL1', 'CUL3', 'CUL4B', 'DBF4B', 'DBF4', 'DGCR8', 'DICER1', 'DTL', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'EBNA1BP2', 'ECT2', 'EGFR', 'EGF', 'ELAVL1', 'ELSPBP1', 'EP400', 'ERBB2', 'ERBB3', 'ERBB4', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM58A', 'FAM83H', 'FBXO5', 'FBXW7', 'FEN1', 'FGFR1', 'FGFR2', 'FGFR3', 'FOXM1', 'FZR1', 'GAPDH', 'GLI1', 'GMNN', 'GSK3B', 'H1F0', 'HDAC1', 'HEATR3', 'HERC5', 'HIST1H1A', 'HIST1H1B', 'HIST1H4A', 'HRAS', 'IFNAR1', 'IGF1R', 'IGF1', 'ITPKB', 'JUN', 'KIF11', 'KIF20A', 'KIF23', 'KIF2C', 'KPNA2', 'KRAS', 'LATS2', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'GMNC', 'MAD2L1', 'MAPK3', 'MATK', 'MAX', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDM2', 'MEGF11', 'MELK', 'MKI67', 'KMT2D', 'KMT2B', 'MNAT1', 'MRE11A', 'MTOR', 'MYBL2', 'MYC', 'NBN', 'NF1', 'NFYB', 'NMI', 'NOTCH1', 'NOTCH3', 'NPAT', 'NRAS', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PARK2', 'PARP1', 'PCBP4', 'PCNA', 'PIK3CA', 'PIK3R1', 'PKMYT1', 'PLK1', 'PLK4', 'POLA1', 'POLD1', 'PPP1R1C', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R4', 'PRC1', 'PRKAR1A', 'PRKAR2A', 'PRMT5', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB10', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSMF1', 'PTEN', 'PTGDR', 'PTK6', 'PTTG1', 'RAD51', 'RAD54L', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RBX1', 'REL', 'REM1', 'RHOA', 'RHOBTB3', 'RINT1', 'RNASE1', 'RPRD1A', 'RPS27A', 'RRM1', 'RRM2', 'RRN3', 'RSF1', 'SHFM1', 'SKP1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'ST8SIA1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STK3', 'STK4', 'TARBP1', 'TCP1', 'TERF1', 'TERT', 'TFDP1', 'TK1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TPX2', 'TTK', 'TUBG1', 'TYMS', 'UBA52', 'UBB', 'UBC', 'UBE2C', 'UBE2QL1', 'UBE2S', 'UHRF2', 'WEE1', 'WEE2', 'XIAP', 'YAP1', 'ZNF217', 'ZNF33A', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.5653217830531887 Spearman Correlation: 0.39568679011873564 Coefficient of Determination: 0.24149153096981246 RMSE: 0.4466070711484212 NRMSE: 0.10777977921867442 MAPE: 98.32911735234117 Pearson Correlation: 0.5569728811141722 Spearman Correlation: 0.47252480518008 Coefficient of Determination: 0.0053116933678326594 RMSE: 0.4171609762678263 NRMSE: 0.22671915405400372 MAPE: 74.69211821323128 Predictor: ElasticNet Pearson Correlation: 0.5416307839061609 Spearman Correlation: 0.3811238162480437 Coefficient of Determination: 0.26895441888994653 RMSE: 0.43844750801885013 NRMSE: 0.10581063011773298 MAPE: 99.10078563912793 Pearson Correlation: 0.5616787726254835 Spearman Correlation: 0.4103577607448172 Coefficient of Determination: 0.30688503584695526 RMSE: 0.3482272927818237 NRMSE: 0.18925499202812174 MAPE: 71.34935739545517 Predictor: RandomForests Pearson Correlation: 0.5498820862330104 Spearman Correlation: 0.4076710344671485 Coefficient of Determination: 0.29507661738840596 RMSE: 0.4305428052246686 NRMSE: 0.10390298651559442 MAPE: 101.41776393568355 Pearson Correlation: 0.5626255949686083 Spearman Correlation: 0.5027697709076299 Coefficient of Determination: 0.31613063720748347 RMSE: 0.34589695817810334 NRMSE: 0.18798849894733308 MAPE: 74.09524188530085 Protein: CCND1 Protein Interaction Partners Count: 857 x_train_column_count: 847 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTL6B', 'AFP', 'AHR', 'AKAP12', 'AKAP8', 'AKR1B10', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDOA', 'ALK', 'ANO1', 'ANXA5', 'APAF1', 'APC', 'APEX1', 'AREG', 'ARHGEF2', 'ARID1A', 'ARID1B', 'ARID2', 'ARID4A', 'AR', 'ASIP', 'ATF2', 'ATF3', 'ATF4', 'ATM', 'ATXN1', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'B2M', 'BANP', 'BARX2', 'BAX', 'BCAR1', 'BCAR3', 'BCCIP', 'BCL2A1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL3', 'BCL6', 'BCL9', 'BECN1', 'BGLAP', 'BHLHE40', 'BIRC2', 'BIRC3', 'BIRC5', 'BMI1', 'BMP4', 'BMP6', 'BRAF', 'BRCA1', 'BRCA2', 'BRD2', 'BRD4', 'BTC', 'BTG2', 'BTRC', 'RGCC', 'COPRS', 'CA9', 'CARD11', 'CARM1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBFB', 'CCDC62', 'CCL2', 'CCL5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNC', 'CCND2', 'CCND3', 'CCNDBP1', 'CCNE1', 'CCNE2', 'CCNG2', 'CCNH', 'CCNK', 'CCNL1', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CD19', 'CD22', 'CD24', 'CD34', 'CD38', 'CD44', 'CD5', 'CD79A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC6', 'CDC73', 'CDCA7L', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK12', 'CDK13', 'CDK14', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK20', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CDX2', 'CENPE', 'CEP57', 'CFLAR', 'CHEK1', 'CHEK2', 'CHKA', 'CHUK', 'CKS1B', 'CKS2', 'CLCN3', 'COL1A1', 'CR2', 'CREB1', 'CREBBP', 'CRKL', 'CRYAB', 'CSF2', 'CTBP1', 'CTGF', 'CTNNB1', 'CTNND1', 'CTTN', 'CUL1', 'CUL3', 'CUL7', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'CYR61', 'DACH1', 'DAXX', 'DDIT3', 'DDX53', 'DECR1', 'DHFR', 'DICER1', 'DKK1', 'DKK3', 'DLL1', 'DMTF1', 'DND1', 'DNMT1', 'DNMT3A', 'DNTT', 'DVL1', 'DVL2', 'DYRK1A', 'DYRK1B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EDN1', 'EEF1A1', 'EGFR', 'EGF', 'EGLN2', 'EGR1', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF3I', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4E', 'EIF4G1', 'ELAVL1', 'ELSPBP1', 'EP300', 'EPCAM', 'EPHA2', 'EPHA7', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EWSR1', 'EYA1', 'EZH2', 'FABP4', 'FADD', 'FAM58A', 'FAM83H', 'FASLG', 'FAT1', 'FBXO31', 'FBXO4', 'FBXW7', 'FBXW8', 'FGF13', 'FGF19', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FHL2', 'FIGF', 'FLCN', 'FLNA', 'FLT1', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXC1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FRZB', 'FSTL3', 'FZD1', 'FZD2', 'FZD7', 'FZD9', 'FZR1', 'GADD45A', 'GAL', 'GAPDH', 'GAST', 'GATA3', 'GATA4', 'GDF15', 'GDF2', 'GGNBP2', 'GGT1', 'GIT1', 'GJA1', 'GJB1', 'GLI1', 'GLI2', 'GLI3', 'GLTSCR2', 'GNB2L1', 'GPER1', 'GRB2', 'GREB1', 'GRM4', 'GRP', 'GSK3B', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HBEGF', 'HBZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC4', 'HEXIM1', 'HEY1', 'HGF', 'HIF1A', 'HIST1H2AA', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AH', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AC', 'HIST2H2BE', 'HIST2H4A', 'HIST4H4', 'HMGA2', 'HMOX1', 'HNF1A', 'HNF4A', 'HNRNPD', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB8', 'ICAM1', 'ID1', 'ID2', 'IFNAR1', 'IFNB1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP3', 'IGFBP5', 'IHH', 'IKBKB', 'IL10', 'IL17A', 'IL2', 'IL4', 'IL6', 'IL7', 'CXCL8', 'ILK', 'INSM1', 'INS', 'IRF1', 'IRS1', 'ISG15', 'ITGB1', 'ITPKB', 'ITPKC', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUNB', 'JUND', 'JUN', 'KAT2A', 'KAT2B', 'KDM1A', 'KDM5B', 'KDR', 'KHDRBS1', 'KIF18B', 'KIN', 'KITLG', 'KIT', 'KLF13', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KRAS', 'KRT10', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LDB3', 'LEF1', 'LEP', 'LGALS3', 'LGR5', 'LIMK2', 'LIMS1', 'LIN28B', 'LMNA', 'LMNB1', 'LOX', 'LRP5', 'LRP6', 'LYN', 'MAFB', 'MAF', 'MAML1', 'MAML2', 'MAML3', 'MAMLD1', 'MAP2K1', 'MAP2K2', 'MAP2K4', 'MAP2K7', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDK', 'MDM2', 'MDM4', 'MEN1', 'MET', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'MLXIPL', 'MME', 'MMP11', 'MMP14', 'MMP15', 'MMP1', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MNAT1', 'MOV10', 'MSH2', 'MST1', 'MTOR', 'MUC1', 'MYBL2', 'MYB', 'MYCN', 'MYC', 'MYEOV', 'MYF5', 'MYOD1', 'MYOG', 'NACA2', 'NADSYN1', 'NANOG', 'NCAM1', 'NCOA1', 'NCOA3', 'NCOR1', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NGF', 'NME1', 'NME2', 'NMI', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NQO1', 'NR0B2', 'NR1H3', 'NR2E1', 'NR3C1', 'NR4A3', 'NRAS', 'NRF1', 'NUDT21', 'ODC1', 'ORAI1', 'ORAOV1', 'ORC4', 'PAK1', 'PAK4', 'PARK2', 'PARP1', 'PAX2', 'PAX5', 'PAX6', 'PBRM1', 'PBX3', 'PCNA', 'PDCD4', 'PDGFRA', 'PDGFRB', 'PDZK1', 'PECAM1', 'PELP1', 'PGR', 'PI3', 'PI4K2A', 'PIK3CA', 'PIK3R1', 'PKLR', 'PKM', 'PLAUR', 'PLAU', 'PLK1', 'PMAIP1', 'POLR2A', 'POTEF', 'POU2F1', 'POU5F1', 'PPARG', 'PPP2R4', 'PRDM5', 'PRKACA', 'PRL', 'PRMT5', 'PRNP', 'PROM1', 'PSAT1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTCHD3', 'PTEN', 'PTF1A', 'PTGS2', 'PTHLH', 'PTH', 'PTK2', 'PTK6', 'PTPN11', 'PTPRCAP', 'PTPRC', 'PXN', 'RAD51', 'RAF1', 'RALA', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RBX1', 'RCC1', 'RELA', 'RELB', 'REL', 'REM1', 'RET', 'RHEB', 'RHOA', 'RHOC', 'RICTOR', 'RNASE1', 'DROSHA', 'RND3', 'RNMT', 'ROCK1', 'RPRD1B', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KA6', 'RPS6KB1', 'RPS6', 'RPTOR', 'RREB1', 'RSF1', 'RUNX1', 'RUNX2', 'RUNX3', 'SDC1', 'SDHC', 'SENP1', 'SERPINE1', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHC1', 'SHFM1', 'SHH', 'SIRT1', 'SIX1', 'SIX3', 'SKP1', 'SKP2', 'SLC25A16', 'SLC25A6', 'SLC2A1', 'SLC35B2', 'SLC39A4', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMO', 'SNAI1', 'SNAI2', 'SNCA', 'SNIP1', 'SNW1', 'SNX33', 'SOCS3', 'SOX11', 'SOX17', 'SOX2', 'SOX4', 'SOX6', 'SOX9', 'SP1', 'SPN', 'SPP1', 'SPRY1', 'SRC', 'SREBF1', 'STAT1', 'STAT3', 'STAT4', 'STAT5A', 'STAT5B', 'STAT6', 'STC2', 'STIM1', 'STK11', 'STK24', 'STMN1', 'SUFU', 'SULF2', 'SUV39H1', 'TAF1', 'TBP', 'TBX2', 'TCEAL7', 'TCF4', 'TCF7L2', 'TCF7', 'TERT', 'TET3', 'TFDP1', 'TFF1', 'TGFA', 'TGFB1', 'TGFBR2', 'THBS1', 'THRA', 'THRB', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLR9', 'TM4SF1', 'TMPRSS4', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF8', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP2A', 'TP53', 'TP63', 'TP73', 'TRPV2', 'TSC22D3', 'TSC2', 'TWIST1', 'TXN', 'TYMS', 'UBA52', 'UBA7', 'UBB', 'UBC', 'UBE2C', 'UBTF', 'URGCP', 'USP18', 'USP2', 'USP9X', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VIP', 'VRK1', 'WDR77', 'WDTC1', 'WEE1', 'WHSC1', 'WIF1', 'WISP1', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'XBP1', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YY1', 'ZBTB17', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.7381778399425848 Spearman Correlation: 0.6989084022968776 Coefficient of Determination: 0.5449060577545135 RMSE: 0.1610582608389361 NRMSE: 0.0968235688154141 MAPE: 597.2529191480522 Pearson Correlation: -0.06311342351731476 Spearman Correlation: 0.023005184885576974 Coefficient of Determination: -1.2105767796778651e+23 RMSE: 81913837426.99376 NRMSE: 63373334643.64808 MAPE: 12666445987181.16 Predictor: ElasticNet Pearson Correlation: 0.34926637535865057 Spearman Correlation: 0.33250846998783634 Coefficient of Determination: 0.08915860709664569 RMSE: 0.22785253103553432 NRMSE: 0.1369783524518969 MAPE: 642.479757157599 Pearson Correlation: 0.2311030786763777 Spearman Correlation: 0.25483185745821924 Coefficient of Determination: 0.040070864030393616 RMSE: 0.23066446210112104 NRMSE: 0.1784555162631685 MAPE: 391.1965915310095 Predictor: RandomForests Pearson Correlation: 0.44507896845787553 Spearman Correlation: 0.365563389280699 Coefficient of Determination: 0.12425736720829539 RMSE: 0.22341931916979413 NRMSE: 0.13431323368108725 MAPE: 613.5119568789014 Pearson Correlation: 0.2408116646751657 Spearman Correlation: 0.27701511319737343 Coefficient of Determination: 0.03546167017314972 RMSE: 0.2312175779507289 NRMSE: 0.17888343902853943 MAPE: 401.7196506975818 Protein: ERBB2 Protein Interaction Partners Count: 663 x_train_column_count: 655 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACPP', 'ACTA2', 'ACTB', 'ACTG1', 'ADAM10', 'ADAM17', 'ADRB2', 'AFP', 'AGRN', 'AKT1S1', 'AKT1', 'AKT2', 'ALB', 'ALDH1A1', 'ALK', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'ANO1', 'ANXA2', 'ANXA5', 'AP2B1', 'APP', 'AREG', 'ARHGEF11', 'ARHGEF12', 'ARID1A', 'ARL6IP5', 'AR', 'ATM', 'ATP2B2', 'AURKB', 'AXIN1', 'BAG1', 'BARD1', 'BCAR1', 'BCAR3', 'BCAS1', 'BCL2L11', 'BCL2L1', 'BDNF', 'BECN1', 'BEST1', 'BIRC5', 'BLNK', 'BMI1', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BSG', 'BTC', 'MIEN1', 'CA9', 'CALU', 'CARTPT', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAV1', 'CBLB', 'CBLC', 'CBL', 'CCL27', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD19', 'CD22', 'CD247', 'CD24', 'CD274', 'CD28', 'CD33', 'CD34', 'CD44', 'CD46', 'CD52', 'CD68', 'CD6', 'CD80', 'CD82', 'CDC37', 'CDC42', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK4', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CEACAM5', 'CEP70', 'CHEK2', 'CHGA', 'CHKA', 'CHKB', 'CISH', 'CLDN3', 'CLDN4', 'CLDN7', 'CLTC', 'CNN1', 'COPS5', 'CPNE3', 'CREB1', 'CRKL', 'CRK', 'YBX3', 'CSF1', 'CSF2', 'CSF3', 'CSK', 'CSPG4', 'CTAG1B', 'CTLA4', 'CTNNB1', 'CTNND1', 'CTSB', 'CTSD', 'CTTN', 'CUL5', 'CXCL12', 'CXCR1', 'CXCR4', 'CYCS', 'CYP19A1', 'CYTIP', 'DCN', 'DDX41', 'DDX53', 'DHH', 'DIAPH1', 'DICER1', 'DLG4', 'DMTF1', 'DNAJA3', 'DNM2', 'DNMT1', 'DOCK1', 'DOCK7', 'DUSP6', 'E2F1', 'E2F3', 'EEA1', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EGFR', 'EGF', 'EIF3A', 'EIF4EBP1', 'EIF4E', 'ELAVL1', 'ELF3', 'EML4', 'ENO2', 'EP300', 'EPCAM', 'EPGN', 'EPHA2', 'EPS15', 'EPX', 'ERAL1', 'ERBB2IP', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ERRFI1', 'ESCO1', 'ESR1', 'ESR2', 'ESRRB', 'ETS1', 'ETS2', 'ETV4', 'ETV6', 'EZH2', 'EZR', 'FASLG', 'FASN', 'FBXW7', 'FCGR1A', 'FCGR1B', 'FCGRT', 'FGF10', 'FGF13', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FIGF', 'FLT1', 'FLT3LG', 'FN1', 'FOLH1', 'FOLR1', 'FOS', 'FOXA1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXP3', 'FREM2', 'FSIP1', 'FYN', 'GAB1', 'GABPB1', 'GAPDH', 'GATA3', 'GATA4', 'GDF2', 'GLI1', 'GLI2', 'GLS', 'GNA11', 'GNAQ', 'GNAS', 'GNRH1', 'GPER1', 'GRAP2', 'GRB2', 'GRB7', 'GSTP1', 'GZMB', 'H2AFX', 'H2AFY', 'HBEGF', 'HDAC1', 'HDAC6', 'HEATR6', 'HGF', 'HIF1A', 'HK1', 'HMGA2', 'HNF4A', 'HOXB7', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPG2', 'ICAM1', 'ID1', 'IDH1', 'IDH2', 'IFNG', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IHH', 'IL10', 'IL2', 'IL4', 'IL6R', 'IL6ST', 'IL6', 'CXCL8', 'ILK', 'INPP4B', 'INS', 'IQGAP1', 'IQSEC1', 'IRS1', 'ITGA5', 'ITGA6', 'ITGAV', 'ITGB1', 'ITGB3', 'ITGB4', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JUN', 'JUP', 'KDR', 'KITLG', 'KLK3', 'KLRK1', 'KRAS', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'L1CAM', 'LAMP1', 'LCN2', 'LDHA', 'LEP', 'LIN28A', 'LIN7A', 'LIN7B', 'LIN7C', 'LINGO1', 'LOX', 'LRIG1', 'LRPPRC', 'MAGEA1', 'MAGEA3', 'MAGED4B', 'MAGED4', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK8', 'MATK', 'MCL1', 'MDK', 'MDM2', 'MEMO1', 'MET', 'MGMT', 'MKI67', 'MLANA', 'MLH1', 'KMT2C', 'MME', 'MMP11', 'MMP14', 'MMP16', 'MMP1', 'MMP2', 'MMP7', 'MMP9', 'MPP1', 'MRAP', 'MRAS', 'MSH2', 'MSH6', 'MSLN', 'MTA1', 'MTOR', 'MUC13', 'MUC16', 'MUC1', 'MUC4', 'MUC6', 'MUCL1', 'MYBL2', 'MYCN', 'MYC', 'NANOG', 'NCAM1', 'NCL', 'NCOA1', 'NCOA3', 'NCOR1', 'NDRG1', 'NF1', 'NF2', 'NFE2L2', 'NGF', 'NISCH', 'NME1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NR1H4', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NRP1', 'NTF3', 'NTF4', 'OPCML', 'OSMR', 'PA2G4', 'PADI2', 'PAK1', 'PALB2', 'PAQR3', 'PARP1', 'PAX2', 'PCSK9', 'PDCD1LG2', 'PDCD1', 'PDCD4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PDGFRA', 'PDPN', 'PECAM1', 'PELP1', 'PEPD', 'PFKFB3', 'PGAP3', 'PGF', 'PGR', 'PI3', 'PIK3C2A', 'PIK3C2B', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIN1', 'PIP', 'PLAUR', 'PLAU', 'PLCG1', 'PLCG2', 'PLEK', 'PLG', 'PLXNB1', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPP3CA', 'PRDM10', 'PRF1', 'PRKACA', 'PRL', 'PROM1', 'PSCA', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'PTPN1', 'PTPRC', 'PTPRO', 'PTPRU', 'PTS', 'PXN', 'RAB25', 'RAD51', 'RAF1', 'RANBP2', 'RARA', 'RASA1', 'RASA2', 'RASSF1', 'RB1', 'RBPJ', 'RDX', 'RECK', 'REM1', 'REN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'S100A14', 'SCGB2A2', 'SCUBE2', 'SDC1', 'SDHC', 'SEMA3D', 'SEMA4D', 'SERPINB5', 'SERPINE1', 'SFRP1', 'PEAK1', 'SH3BGRL3', 'SH3BGRL', 'SH3TC2', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SIAH2', 'PMEL', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC4A7', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SMUG1', 'SMYD3', 'SNAI1', 'SNAI2', 'SOCS1', 'SOS1', 'SOX10', 'SOX2', 'SOX9', 'SP3', 'SPP1', 'SPRY2', 'SRCIN1', 'SRC', 'STARD3', 'STAT1', 'STAT2', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STOM', 'STUB1', 'SYP', 'TAGLN', 'TBX1', 'TERT', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TFRC', 'TGFA', 'TGFB1', 'THBS1', 'THRA', 'TIMP1', 'TJP1', 'TMPRSS2', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF4', 'TNFRSF8', 'TNFRSF9', 'TNFSF11', 'TNF', 'TNS1', 'TNS3', 'TNS4', 'TOB1', 'TOP1', 'TOP2A', 'TP53', 'TP63', 'TSC2', 'TWIST1', 'TYMS', 'TYR', 'UBA52', 'UBB', 'UBC', 'USP2', 'USP9X', 'VAV1', 'VAV2', 'VAV3', 'VCL', 'VEGFA', 'VEGFB', 'VEGFC', 'VIM', 'WASL', 'WDFY2', 'WDTC1', 'WNT10A', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7B', 'WNT9A', 'WNT9B', 'WT1', 'WWOX', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YES1', 'YY1', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.7731923163745658 Spearman Correlation: 0.6873693637045336 Coefficient of Determination: 0.5925025353492742 RMSE: 0.627508810751368 NRMSE: 0.11261217284628752 MAPE: 393.0558220494797 Pearson Correlation: 0.03911658635614802 Spearman Correlation: 0.1794066881666103 Coefficient of Determination: -1.0598716045165819e+24 RMSE: 1088389741973.2659 NRMSE: 185425105537.46628 MAPE: 63413561430179.58 Predictor: ElasticNet Pearson Correlation: 0.653433329668849 Spearman Correlation: 0.567323381753711 Coefficient of Determination: 0.4032592782971235 RMSE: 0.7593643600683259 NRMSE: 0.13627485240714352 MAPE: 387.8711494203285 Pearson Correlation: 0.41673569837453533 Spearman Correlation: 0.37647546580821384 Coefficient of Determination: 0.16511460715387083 RMSE: 0.965986913187581 NRMSE: 0.16457176911726001 MAPE: 3041.2422327920685 Predictor: RandomForests Pearson Correlation: 0.6170409263297942 Spearman Correlation: 0.5027290060680367 Coefficient of Determination: 0.25471461405535123 RMSE: 0.8486305759561094 NRMSE: 0.15229448808501145 MAPE: 360.0529307312247 Pearson Correlation: 0.40846973082165244 Spearman Correlation: 0.36745772963168893 Coefficient of Determination: 0.12406275670180755 RMSE: 0.9894510359286447 NRMSE: 0.16856926860463817 MAPE: 1644.0943949385821 Protein: ERBB3 Protein Interaction Partners Count: 245 x_train_column_count: 247 x_train columns: ['ADAM17', 'AGRN', 'AGTR2', 'AKT1', 'AKT2', 'AKT3', 'ALAS2', 'ALB', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'APIP', 'AREG', 'AR', 'BAMBI', 'BDNF', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BTC', 'CADM4', 'CASK', 'CASP3', 'CBLB', 'CBLC', 'CBL', 'CCND1', 'CCNE1', 'CD44', 'CD82', 'CDC42', 'CDH1', 'CDK4', 'CDK5', 'CDKN1B', 'CDKN2A', 'CLEC16A', 'COMMD5', 'COQ7', 'CRKL', 'CRK', 'CRYZL1', 'CSF1', 'CSK', 'CSPG5', 'CTNNB1', 'DCN', 'DHH', 'DOCK7', 'DUSP6', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EIF4EBP1', 'EIF4E', 'EML4', 'EPCAM', 'EPGN', 'EPN1', 'ERBB2IP', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'ESR2', 'FBXO9', 'FGF10', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FIGF', 'FKBP14', 'FLNA', 'FLT3LG', 'FN1', 'FOXA1', 'FOXO3', 'FREM2', 'FTSJ1', 'GAB1', 'GAPDH', 'GLE1', 'GRB2', 'GRB7', 'GRHL2', 'HBEGF', 'HGF', 'HGS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPG2', 'IGF1', 'IGF2', 'IL6ST', 'ILK', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'ITPKB', 'JAK1', 'JAK2', 'JUN', 'KDR', 'KITLG', 'KRAS', 'L1CAM', 'LAMA1', 'LAMB1', 'LAMC2', 'LIN7A', 'LIN7B', 'LIN7C', 'LRIG1', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARCH7', 'MDM2', 'MET', 'MITF', 'MMP9', 'MRPL49', 'MTOR', 'MUC1', 'MUC4', 'MYC', 'N4BP1', 'NDRG1', 'NEDD4L', 'NEDD4', 'NF1', 'NGF', 'NICN1', 'NOTCH1', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NTF3', 'NTF4', 'OAT', 'PA2G4', 'PARK7', 'PCSK9', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PGR', 'PI3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIP5K1C', 'PLCG1', 'PLCG2', 'PPP1R9A', 'PRKACA', 'PTEN', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN22', 'PTPN2', 'RASA1', 'RASA2', 'REM1', 'RGS4', 'RHOA', 'RHOC', 'RNF41', 'ROR1', 'RRAS2', 'SH2B3', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SLC25A16', 'SMAD4', 'SNAI2', 'SOS1', 'SOX10', 'SOX2', 'SPARC', 'SPRY2', 'SRC', 'STAT3', 'STAT5A', 'STAT5B', 'SYN3', 'TCF7L2', 'TGFA', 'TMEFF2', 'TNFRSF13C', 'TNS1', 'TP53', 'USP8', 'VAV1', 'VAV2', 'VAV3', 'VEGFA', 'VEGFB', 'VEGFC', 'WNT1', 'WNT5A', 'ZEB1', 'ZNF217', 'KRBOX4', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.49827526712496417 Spearman Correlation: 0.47063394751012966 Coefficient of Determination: 0.21064601723475473 RMSE: 0.395481116443641 NRMSE: 0.10672900237854874 MAPE: 188.52575491807758 Pearson Correlation: 0.01778883700583857 Spearman Correlation: 0.3032022586211218 Coefficient of Determination: -3.697041862118242e+24 RMSE: 995562820593.8698 NRMSE: 367421942284.209 MAPE: 77663414494605.22 Predictor: ElasticNet Pearson Correlation: 0.3840208704646029 Spearman Correlation: 0.3872041314727448 Coefficient of Determination: 0.1330205472531153 RMSE: 0.41447109804117355 NRMSE: 0.11185385336844544 MAPE: 204.99297619669798 Pearson Correlation: 0.3544904018579029 Spearman Correlation: 0.3251007830972089 Coefficient of Determination: 0.11086131764987373 RMSE: 0.4882319965999042 NRMSE: 0.18018666905321623 MAPE: 294.58262300679655 Predictor: RandomForests Pearson Correlation: 0.420413879357678 Spearman Correlation: 0.3755351964448737 Coefficient of Determination: 0.14151502816399308 RMSE: 0.41243565006361727 NRMSE: 0.11130454437996186 MAPE: 212.4537755639188 Pearson Correlation: 0.2946852275575814 Spearman Correlation: 0.3010261256648336 Coefficient of Determination: 0.07558318609661485 RMSE: 0.4978235109957497 NRMSE: 0.18372650880603697 MAPE: 318.10354383085723 Fold: 3 Protein: RB1 Protein Interaction Partners Count: 369 x_train_column_count: 366 x_train columns: ['AATF', 'ABCC1', 'ABL1', 'ACTL6A', 'ACTL6B', 'AFAP1', 'AHR', 'AKT1', 'ANXA5', 'ARID1A', 'ARID1B', 'ARID4A', 'ARMCX1', 'ARMCX2', 'ARMCX3', 'ARNT', 'AR', 'ASF1A', 'ATF2', 'ATM', 'AURKB', 'BCR', 'BDP1', 'BGLAP', 'BRCA1', 'BRF1', 'FAM208A', 'C4BPA', 'CABIN1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CBFB', 'CBX1', 'CBX4', 'CBX5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNT2', 'CDC25A', 'CDC27', 'CDC6', 'CDH1', 'CDK14', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPA', 'CEBPB', 'CEBPD', 'CEBPE', 'CHEK1', 'CHEK2', 'CLNK', 'COL1A1', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUX1', 'DCAF10', 'DGKZ', 'DNAJA3', 'DNMT1', 'DNMT3A', 'DUSP1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EGFR', 'EGF', 'EID1', 'EIF2AK1', 'EIF2AK4', 'AGO2', 'ELF1', 'ENC1', 'EP300', 'ERBB2', 'ESD', 'ESR1', 'ESR2', 'EZH2', 'FBXW7', 'FMO5', 'FOS', 'FOXM1', 'FRK', 'FZR1', 'G6PD', 'GAPDH', 'GATA1', 'GJA1', 'GNB2L1', 'GRB2', 'GSC', 'GTF2H1', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HARS2', 'HARS', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC8', 'HDC', 'HES1', 'HIF1A', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HIST4H4', 'HMGA1', 'HMGA2', 'HRAS', 'HSP90AA1', 'HSPA1A', 'HSPA8', 'ID2', 'IFI16', 'INS', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'KDM2A', 'KDM4A', 'KDM5A', 'KDM5B', 'PPP1R26', 'KIF11', 'KRAS', 'KRT10', 'KRT14', 'KRT5', 'L3MBTL2', 'L3MBTL1', 'LIMD1', 'LIN52', 'LIN54', 'LIN9', 'LMNA', 'LOR', 'LPAR6', 'MAF', 'MAP2K7', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEF2C', 'MORF4L1', 'MRFAP1', 'MRPL11', 'MRPS18B', 'MSH6', 'MTL5', 'MYBL2', 'MYC', 'MYOD1', 'NACC2', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NCR1', 'NDC80', 'NEO1', 'NFYA', 'NFYB', 'NFYC', 'NGF', 'NOTCH1', 'NPM1', 'NRAS', 'ORC1', 'PA2G4', 'PAX2', 'PAX3', 'PAX5', 'PAX6', 'PAX8', 'PCNA', 'PELP1', 'PGR', 'PHB', 'PHF21B', 'PIAS4', 'PIK3CA', 'PIK3R1', 'PIK3R3', 'PLK1', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPIA', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP1R3A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R3B', 'PPRC1', 'PRB1', 'PRB3', 'PRB4', 'PRDM2', 'PRH1', 'PRH2', 'PRIM1', 'PRIM2', 'PRKCB', 'PRMT2', 'PSMA7', 'PSMC1', 'PSMD10', 'PTEN', 'PTGDR', 'RAF1', 'RB1CC1', 'RBAK', 'RBBP4', 'RBBP5', 'RBBP6', 'RBBP7', 'RBBP8', 'RBBP9', 'RBL1', 'RBL2', 'RBFOX2', 'RFC1', 'RPS6KB1', 'RUNX2', 'S100A6', 'SETD1B', 'SETD7', 'SIRT1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMC1A', 'SMC2', 'SMC4', 'SMC5', 'SMYD2', 'SNW1', 'SP100', 'SP1', 'SP3', 'SPI1', 'STAM', 'STAT3', 'SUV39H1', 'SUV420H2', 'SUZ12', 'TAF1', 'TBP', 'TERT', 'TFAP2A', 'TFDP1', 'TFDP3', 'TGM2', 'THAP1', 'TMPO', 'TNS1', 'TOP2A', 'TP53BP1', 'TP53', 'TP73', 'TRDMT1', 'TRIM27', 'TTK', 'UBE2I', 'UBE3A', 'UBL4A', 'UBN1', 'UBR4', 'UBTF', 'UHRF1', 'USP4', 'USP7', 'VEGFA', 'VPS39', 'WDR59', 'WDR73', 'WEE1', 'WWTR1', 'YAP1', 'YY1', 'ZBTB16', 'ZBTB7A', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.22357609902868286 Spearman Correlation: 0.24668332577483 Coefficient of Determination: -0.5889986087110237 RMSE: 0.3032657369705298 NRMSE: 0.11090759836546583 MAPE: 1355.5328667096294 Pearson Correlation: 0.022773506182813954 Spearman Correlation: 0.11259038289061914 Coefficient of Determination: -1.2815547634775677 RMSE: 0.33482101906236866 NRMSE: 0.23493903691031665 MAPE: 818.7939463300028 Predictor: ElasticNet Pearson Correlation: 0.20462587027769896 Spearman Correlation: 0.22065663170601577 Coefficient of Determination: 0.02444925971704981 RMSE: 0.23762193020041372 NRMSE: 0.08690093995041462 MAPE: 225.37302103431975 Pearson Correlation: 0.2488578583773893 Spearman Correlation: 0.20887194567609033 Coefficient of Determination: 0.004068498297904566 RMSE: 0.2212136898685011 NRMSE: 0.1552224271780324 MAPE: 182.50798369423927 Predictor: RandomForests Pearson Correlation: 0.36538758638120844 Spearman Correlation: 0.3234319009587391 Coefficient of Determination: 0.06894657012710337 RMSE: 0.23213941736056323 NRMSE: 0.08489592501483442 MAPE: 234.33179566606498 Pearson Correlation: 0.10473781517604147 Spearman Correlation: 0.15527893774116205 Coefficient of Determination: -0.015827537433055205 RMSE: 0.22341239074128033 NRMSE: 0.1567652235859497 MAPE: 179.60033699464702 Protein: CDH1 Protein Interaction Partners Count: 834 x_train_column_count: 823 x_train columns: ['ABCB1', 'ABCG2', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTR3', 'ACVR1B', 'ADAM10', 'ADAM15', 'ADAM17', 'ADAM9', 'AFP', 'AIMP1', 'AJAP1', 'AKAP9', 'AKT1', 'AKT2', 'AKTIP', 'ALB', 'ALCAM', 'ALDH1A1', 'ALDH3A1', 'ALK', 'AMOTL2', 'ANAPC4', 'ANAPC7', 'ANO1', 'ANXA2', 'ANXA5', 'AP1M1', 'AP1M2', 'APC2', 'APC', 'AQP1', 'AQP5', 'AREG', 'ARF6', 'ARHGAP31', 'ARID1A', 'ARL2BP', 'ARMC7', 'ARPC1A', 'ARPC2', 'ARRB2', 'ARVCF', 'AR', 'CLMP', 'ASF1A', 'ATF2', 'ATF3', 'ATM', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BAG3', 'BANP', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL6B', 'BCL9L', 'BCORL1', 'BMI1', 'BMP2', 'BMP4', 'BMP6', 'BMP7', 'BNIP3', 'BRCA1', 'BRCA2', 'BSG', 'BTBD7', 'BTC', 'BTF3', 'ANAPC15', 'CA2', 'CA9', 'CALCA', 'CALR', 'CAPN1', 'CAPNS1', 'CASP3', 'CASP8', 'CASP9', 'CASS4', 'CAV1', 'CBLL1', 'CBL', 'CBX7', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CCR7', 'CD1A', 'CD1B', 'CD1C', 'CD1E', 'CD207', 'CD24', 'CD274', 'CD276', 'CD2AP', 'CD34', 'CD44', 'CD46', 'CD68', 'CD82', 'CDC16', 'CDC23', 'CDC27', 'CDC42', 'CDC6', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH24', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK14', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN3', 'CDX2', 'CEACAM5', 'CFL1', 'CGN', 'CHGA', 'CHL1', 'CLCA2', 'CLDN1', 'CLDN2', 'CLDN3', 'CLDN4', 'CLDN5', 'CLDN7', 'CNTN1', 'COL1A1', 'CORO1C', 'CRB3', 'CREB1', 'CREBBP', 'CRYAB', 'YBX3', 'CSDC2', 'CSE1L', 'CSF2', 'CSNK2A1', 'CSNK2A2', 'CST5', 'CTBP1', 'CTBP2', 'CTCF', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTSL', 'CTTN', 'CXCL12', 'CXCL1', 'CXCR4', 'CYP1B1', 'DAAM1', 'DAB2IP', 'DACH1', 'DAPK1', 'DAP', 'DDR1', 'DDR2', 'DDX3X', 'DICER1', 'DKK1', 'DLC1', 'DLG1', 'DLG5', 'DNM2', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOT1L', 'DPAGT1', 'DPEP1', 'DSP', 'DUOX1', 'DUSP4', 'DVL1', 'DVL2', 'E2F1', 'ECT2', 'EDN1', 'EFEMP1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'EHD1', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'ELAVL1', 'ELF3', 'ENAH', 'ENG', 'EP300', 'EPB41L3', 'EPCAM', 'EPHA10', 'EPHA1', 'EPHA2', 'EPPK1', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ESRP1', 'ESRP2', 'ETS1', 'ETS2', 'EXOC3', 'EXOC4', 'EYA2', 'EZH2', 'EZR', 'F11R', 'F2RL2', 'SUPT20H', 'FBXL5', 'FER', 'FGF10', 'FGF13', 'FGF17', 'FGF19', 'FGF2', 'FGF4', 'FGF5', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FMN1', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC1', 'FOXC2', 'FOXJ2', 'FOXK2', 'FOXL1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXQ1', 'FRMPD2', 'FSCN1', 'FUT4', 'FXYD5', 'FYN', 'FZD1', 'FZD4', 'FZD7', 'FZR1', 'G6PD', 'GAB2', 'GABPA', 'GADD45A', 'GAPDH', 'GAS6', 'GATA1', 'GATA3', 'GATA4', 'GATA6', 'GDNF', 'GFRA1', 'GGT1', 'GJA1', 'GJB1', 'GJB2', 'GKN2', 'GLI1', 'GLI2', 'GMNN', 'GNA12', 'GNA13', 'GNB2L1', 'GNL3', 'GPA33', 'GRB2', 'GRHL2', 'GRHL3', 'GSK3B', 'GSN', 'GSTP1', 'H2AFZ', 'HAVCR2', 'HBEGF', 'HDAC1', 'HDAC2', 'HEPACAM', 'HES1', 'HGF', 'HGS', 'HIF1A', 'HMGA2', 'HNF4A', 'HOXB4', 'HOXD10', 'HPGDS', 'HPGD', 'HRAS', 'HSP90AA1', 'HSPA5', 'ICAM1', 'ID1', 'ID2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP3', 'IL10', 'IL15', 'IL17A', 'IL1B', 'IL24', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IQSEC1', 'IRS1', 'IRS2', 'ITGA5', 'ITGA6', 'ITGAE', 'ITGAM', 'ITGB1', 'ITGB4', 'ITGB7', 'ITPKB', 'IVL', 'JAG1', 'JAK2', 'AJUBA', 'JUN', 'JUP', 'KDM1A', 'KDM6A', 'KDR', 'KEAP1', 'KIFC3', 'KIT', 'KLF4', 'KLF5', 'KLF8', 'KLK3', 'KLK7', 'KLRG1', 'KRAS', 'KRT10', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'KRT9', 'LAMA1', 'LAMB1', 'LAMC2', 'LASP1', 'LATS1', 'LATS2', 'LCN2', 'LEF1', 'LEP', 'LGALS3', 'LGALS4', 'LGALS9', 'LGR5', 'LIF', 'LIMA1', 'LIN28A', 'LIPG', 'LLGL2', 'LMNA', 'LOR', 'LOXL2', 'LOXL3', 'LOX', 'LRP5', 'LRP6', 'LY6K', 'MACC1', 'MACROD1', 'MAD2L2', 'MAGI1', 'MAP2K1', 'MAP2K7', 'MAP4K5', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARK2', 'MARVELD2', 'MCAM', 'MCL1', 'MDM2', 'MED1', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGAT5', 'MGMT', 'MKI67', 'MLH1', 'MLLT4', 'MME', 'MMP11', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP1', 'MMP25', 'MMP27', 'MMP2', 'MMP3', 'MMP7', 'MMP8', 'MMP9', 'MPP5', 'MRAP', 'MSH2', 'MSN', 'MT1G', 'MTA1', 'MTA3', 'MTBP', 'MTDH', 'MTOR', 'MUC1', 'MUC4', 'MYCN', 'MYC', 'MYH6', 'MYO6', 'MYO7A', 'NANOG', 'NCAM1', 'NCOA1', 'NCSTN', 'NDRG1', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEUROG3', 'NF2', 'NFE2L2', 'NFIC', 'NKD2', 'NME1', 'NOG', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NR2F1', 'NRP2', 'NUDT21', 'NUMBL', 'NUMB', 'NUP98', 'NUTF2', 'OTUB1', 'OVOL1', 'OVOL2', 'PARD3', 'PARD6A', 'PAX2', 'PAX5', 'PAX6', 'PAX8', 'PCSK9', 'PDCD4', 'PDGFRB', 'PDPN', 'PEBP1', 'PECAM1', 'PGR', 'PHLPP1', 'PI3', 'PIK3CA', 'PIK3R1', 'PIP5K1A', 'PIP5K1C', 'PIP', 'PIR', 'PITX1', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAUR', 'PLAU', 'PLCD1', 'PLEKHA7', 'PLG', 'PODXL', 'POLR2C', 'POSTN', 'POTEF', 'POU5F1', 'PPARA', 'PPARGC1A', 'PPARG', 'PPL', 'PPP6C', 'PRAME', 'PRDM10', 'PRKAR1A', 'PRKCA', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRKG1', 'PRMT5', 'PROC', 'PROM1', 'PRSS8', 'PSEN1', 'PTCH1', 'PTEN', 'PTF1A', 'PTGS2', 'PTK2', 'PTPN11', 'PTPN14', 'PTPRC', 'PTPRF', 'PTPRJ', 'PTPRM', 'PTPRS', 'PTPRT', 'PTPRU', 'PTRH2', 'PVRL1', 'PVRL2', 'PVR', 'PXN', 'RAB11A', 'RAB25', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RACGAP1', 'RAF1', 'RALA', 'RALBP1', 'RALGDS', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RARB', 'RASSF1', 'RB1', 'RBM4', 'RCOR1', 'RDX', 'REM1', 'RET', 'RHOA', 'RHOB', 'RHOC', 'RHOD', 'RICTOR', 'RND3', 'ROCK1', 'ROCK2', 'RPS6KB1', 'RPTOR', 'RRM2', 'RUNX2', 'RUNX3', 'S100A14', 'S100A4', 'S100A8', 'SATB1', 'SCRIB', 'SDC1', 'SDC4', 'SDHC', 'SELE', 'SELL', 'SELP', 'SEMA3C', 'SEMA3F', 'SENP1', 'SERPINB4', 'SERPINB5', 'SERPINE1', 'SFN', 'SFRP1', 'SFRP2', 'SFTPC', 'SHH', 'SIK1', 'SIN3A', 'SIRT1', 'SIRT2', 'SIRT4', 'SIRT7', 'SIX1', 'SIX2', 'SKIL', 'SKP2', 'SLC2A1', 'SLC39A6', 'SLC6A3', 'SLC9A3R1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SNAI1', 'SNAI2', 'SNAI3', 'SNX16', 'SNX1', 'SOX10', 'SOX17', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPARC', 'SPDEF', 'SPINT1', 'SPP1', 'SPRY1', 'SRCIN1', 'SRC', 'SRXN1', 'ST14', 'ST7L', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STX4', 'STYK1', 'SUCLG2', 'SUMO1', 'SUZ12', 'SYNJ2', 'SYP', 'TACC3', 'TACSTD2', 'TATDN1', 'TBX1', 'TBX3', 'TCF15', 'TCF4', 'TDGF1', 'TERT', 'TET2', 'TFF1', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBI', 'TGFBR1', 'TGFBR2', 'THBS1', 'THEM4', 'THUMPD1', 'THY1', 'TIAM1', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLN1', 'TLR4', 'TMPRSS2', 'TMPRSS4', 'TNFRSF6B', 'TNF', 'TNK2', 'TNS1', 'TP53BP1', 'TP53BP2', 'TP53', 'TRIM21', 'TRIM29', 'TRIM44', 'TRIP10', 'TRPS1', 'TSPYL2', 'TWIST1', 'TWIST2', 'TYRP1', 'T', 'UBE2I', 'UBE2S', 'USP48', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VEZT', 'VHL', 'VIM', 'VIPAS39', 'VPS33B', 'VTN', 'WASL', 'WDFY2', 'WDTC1', 'WIF1', 'WISP1', 'WISP3', 'WNT10A', 'WNT10B', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT9A', 'WNT9B', 'WT1', 'XIAP', 'YAP1', 'YBX1', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.8295023929689933 Spearman Correlation: 0.7789245668103527 Coefficient of Determination: 0.6880733818127163 RMSE: 0.6560792428682445 NRMSE: 0.10446789001436967 MAPE: 534.6248051056751 Pearson Correlation: 0.02376343178292245 Spearman Correlation: 0.259706480130675 Coefficient of Determination: -1.4227310212661975e+18 RMSE: 1123052653.8675108 NRMSE: 220786508.44719672 MAPE: 22172812422.926514 Predictor: ElasticNet Pearson Correlation: 0.7005389516114232 Spearman Correlation: 0.6571252409463749 Coefficient of Determination: 0.458578873948549 RMSE: 0.8643660054089287 NRMSE: 0.1376335157174817 MAPE: 498.93669036705336 Pearson Correlation: 0.44387436936005004 Spearman Correlation: 0.40272571977206706 Coefficient of Determination: 0.111277524939701 RMSE: 0.8876092093705089 NRMSE: 0.1744995103547574 MAPE: 280.70766598400263 Predictor: RandomForests Pearson Correlation: 0.6217523452895986 Spearman Correlation: 0.5762204557504592 Coefficient of Determination: 0.3839080774856036 RMSE: 0.9220465278423516 NRMSE: 0.1468180197831839 MAPE: 386.84014841819123 Pearson Correlation: 0.6050089009216816 Spearman Correlation: 0.3545634639708373 Coefficient of Determination: 0.34532018982518164 RMSE: 0.761821441748586 NRMSE: 0.14977026731973933 MAPE: 191.27846359469623 Protein: CDH2 Protein Interaction Partners Count: 472 x_train_column_count: 466 x_train columns: ['ABCG2', 'ABL1', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTR3', 'ADAM10', 'ADH1A', 'AFP', 'AHSG', 'AKT1', 'AKT3', 'ALB', 'ALCAM', 'ALDH1A1', 'AMBN', 'AMELX', 'AMOTL1', 'AMTN', 'ANGPT1', 'ANO8', 'ANXA5', 'APC2', 'APC', 'APLP2', 'APOA1', 'APOA2', 'APOA5', 'APOB', 'APOE', 'APOL1', 'APPL1', 'APP', 'ARHGAP32', 'ARMC7', 'ARPC5', 'ARVCF', 'AR', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BCL2L1', 'BDNF', 'BMI1', 'BMP15', 'BMP2', 'BMP4', 'BMP7', 'BNIP2', 'BOC', 'BPIFB2', 'RGCC', 'GSKIP', 'C3', 'C4A', 'CABLES1', 'CADM1', 'CALU', 'CASP3', 'CAV1', 'CBLL1', 'CCNA2', 'CCNB1', 'CCND1', 'CD24', 'CD34', 'CD44', 'CD80', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK4', 'CDK5', 'CDK6', 'CDKN2A', 'CDON', 'CDX2', 'CEBPZ', 'CFL1', 'CHGB', 'CHL1', 'CHRDL1', 'CKAP4', 'CLDN11', 'CLDN3', 'CLDN4', 'CLDN7', 'CORT', 'CP', 'CREBBP', 'CRP', 'CSF1', 'CSK', 'CST3', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTTN', 'CXCL12', 'CXCR4', 'CYLD', 'CYR61', 'DBN1', 'DDR1', 'DDR2', 'DKK1', 'DLG4', 'DLG5', 'DMP1', 'DNAJC3', 'DSP', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EFNB2', 'EFNB3', 'EGFR', 'EGF', 'EHMT2', 'EIF2AK3', 'ENAM', 'ENG', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA4', 'EPHB2', 'EPS8', 'ERBB2', 'ERBB4', 'ESR1', 'ESRP1', 'EXOC4', 'EZH2', 'EZR', 'F11R', 'F5', 'EVA1A', 'FAM20A', 'FAM20C', 'FBN1', 'FER', 'FGA', 'FGF13', 'FGF23', 'FGF2', 'FGFR1', 'FGFR4', 'FGG', 'FN1', 'FOXC2', 'FOXD3', 'FOXO1', 'FOXP4', 'FSTL1', 'FSTL3', 'FUCA2', 'GAA', 'GAPDH', 'GAS6', 'GATA4', 'GFAP', 'GJA10', 'GJA1', 'GJA3', 'GJB6', 'GJC1', 'GJC3', 'GJD3', 'GJD4', 'GLI1', 'GOLM1', 'GPC3', 'GRIA1', 'GRIA2', 'HGF', 'HMGA2', 'HNF4A', 'HRAS', 'HRC', 'HSP90B1', 'HSPA5', 'IARS2', 'IGF1R', 'IGF1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL1B', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'INVS', 'IQGAP1', 'ISL1', 'ITGA6', 'ITGB1', 'ITIH2', 'ITPKB', 'JAG1', 'JAM3', 'JUN', 'JUP', 'KCNA5', 'KDR', 'KIAA2022', 'KIF5B', 'KIT', 'KLF4', 'KNG1', 'KRAS', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT8', 'KTN1', 'L1CAM', 'LAMB1', 'LAMB2', 'LAMC1', 'LEF1', 'LGALS1', 'LRP5', 'LRP6', 'LRRC7', 'LTBP1', 'LTBP3', 'MAP1B', 'MAP2K6', 'MAP2K7', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MATN3', 'MBTPS1', 'MCAM', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEPE', 'MET', 'MFGE8', 'MFI2', 'MGAT4A', 'MIA3', 'MKI67', 'MLLT4', 'MMP14', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MPDZ', 'MPP5', 'MRAP', 'MRPL49', 'MSLN', 'MSN', 'MTHFD1', 'MUC1', 'MUC4', 'MXRA8', 'MYC', 'MYO10', 'MZF1', 'NANOG', 'NCAM1', 'NCSTN', 'NDRG1', 'NENF', 'NES', 'NFASC', 'NGF', 'NLGN1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTUM', 'NRCAM', 'NT5C', 'NT5E', 'NTRK2', 'NUCB1', 'NUMBL', 'NUMB', 'OLFM3', 'P4HB', 'PARD3', 'PAX6', 'PCSK9', 'PC', 'PDGFRB', 'PDIA4', 'PDIA6', 'PECAM1', 'PENK', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PITX2', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PNPLA2', 'POU5F1', 'PPT2', 'PRKCDBP', 'PRKCSH', 'PROC', 'PROM1', 'PRPH', 'PRSS23', 'PSEN1', 'PTEN', 'PTK2', 'PTPN11', 'PTPN1', 'PTPN2', 'PTPRC', 'PTPRS', 'PVRL1', 'PVRL2', 'PVRL3', 'PXN', 'QSOX1', 'RAB11FIP1', 'RAB3D', 'RAB5A', 'RAC1', 'RCN1', 'RELN', 'REM1', 'RHOA', 'RHOB', 'RHOC', 'ROBO1', 'PTBP3', 'RPS6KB1', 'RUNX2', 'S100A14', 'S100A4', 'SARS2', 'SCARB2', 'SCG2', 'SCG3', 'SDC2', 'SEMA3A', 'SENP3', 'SERPINA10', 'SERPINA1', 'SERPINC1', 'SERPIND1', 'SERPINE1', 'SHH', 'SHISA5', 'SIRT7', 'SKP1', 'SLC2A1', 'SLC9A3R1', 'SLIT1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SNAI1', 'SNAI2', 'SNAI3', 'SOX10', 'SOX18', 'SOX1', 'SOX2', 'SOX4', 'SOX9', 'SP7', 'SPAG9', 'SPARCL1', 'SPARC', 'SPP1', 'SPP2', 'SRC', 'ST6GALNAC5', 'STAT3', 'STC2', 'SYP', 'TBX1', 'TCF3', 'TEK', 'TF', 'TGFB1', 'TGFBR1', 'TGM2', 'TGOLN2', 'THY1', 'TIMP1', 'TJP1', 'TJP3', 'TMEM132A', 'TNC', 'TNF', 'TNNT1', 'TP53', 'TRPS1', 'TSC2', 'TWIST1', 'TWIST2', 'USP9X', 'VANGL2', 'VCAM1', 'VCAN', 'VCL', 'VEGFA', 'VGF', 'VIM', 'VTN', 'VWA1', 'WFS1', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7A', 'XIRP1', 'ZBTB16', 'ZEB1', 'ZEB2', 'ZSCAN1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.6344246550544949 Spearman Correlation: 0.5945007775571826 Coefficient of Determination: 0.4024629496226506 RMSE: 0.2946989334766728 NRMSE: 0.10678271377515502 MAPE: 360.1865664133143 Pearson Correlation: -0.008023011842983405 Spearman Correlation: 0.059908121606407586 Coefficient of Determination: -3.4635192947455086e+20 RMSE: 6178295602.326054 NRMSE: 3255366831.58369 MAPE: 774781097637.2103 Predictor: ElasticNet Pearson Correlation: 0.40862780600881726 Spearman Correlation: 0.4269177489519714 Coefficient of Determination: 0.14404902392691066 RMSE: 0.3527122882183905 NRMSE: 0.12780356845365262 MAPE: 1448.2039344608584 Pearson Correlation: 0.0783303346088169 Spearman Correlation: 0.09231298683654957 Coefficient of Determination: -0.0432667807783822 RMSE: 0.33908421046117176 NRMSE: 0.17866472614768678 MAPE: 1882.07298994059 Predictor: RandomForests Pearson Correlation: 0.3967615486319079 Spearman Correlation: 0.41543740973213583 Coefficient of Determination: 0.14204585967450223 RMSE: 0.35312476964214695 NRMSE: 0.12795302907534856 MAPE: 870.7836319509568 Pearson Correlation: 0.08263629540679271 Spearman Correlation: 0.1030456061778174 Coefficient of Determination: -0.02959641639755861 RMSE: 0.33685530313688006 NRMSE: 0.1774903066246971 MAPE: 1810.0241556609592 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.3925836158430096 Spearman Correlation: 0.38189784455617487 Coefficient of Determination: 0.15409219008905617 RMSE: 0.19545299325434787 NRMSE: 0.1371253530717488 MAPE: 476.6654588626865 Pearson Correlation: 0.26640368218459504 Spearman Correlation: 0.31514108017453535 Coefficient of Determination: 0.0523664189197427 RMSE: 0.18333092946744273 NRMSE: 0.1594639587598552 MAPE: 147.86419027878517 Predictor: ElasticNet Pearson Correlation: 0.29283839991444177 Spearman Correlation: 0.303397902104558 Coefficient of Determination: 0.05681688913605831 RMSE: 0.20638532623625663 NRMSE: 0.1447952280380091 MAPE: 193.0711576645526 Pearson Correlation: 0.2790227734000401 Spearman Correlation: 0.3222321853148386 Coefficient of Determination: 0.04974725586683204 RMSE: 0.18358410869011216 NRMSE: 0.1596841777989442 MAPE: 106.09793057357864 Predictor: RandomForests Pearson Correlation: 0.322824037581475 Spearman Correlation: 0.32256981954304026 Coefficient of Determination: 0.09960215539600381 RMSE: 0.20164990968535823 NRMSE: 0.1414729680118414 MAPE: 307.7470613347643 Pearson Correlation: 0.25833465266500605 Spearman Correlation: 0.3005132266174528 Coefficient of Determination: 0.058860643862032824 RMSE: 0.18270165716779274 NRMSE: 0.15891660839005345 MAPE: 122.19313182390943 Protein: PTEN Protein Interaction Partners Count: 884 x_train_column_count: 875 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ABTB1', 'ACTB', 'ACTG1', 'ADM', 'AEBP1', 'AFP', 'AKT1S1', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'AMHR2', 'ANXA2', 'ANXA5', 'APAF1', 'APC', 'ARAF', 'AREG', 'ARHGAP21', 'ARID1A', 'ARID2', 'ARL2BP', 'AR', 'ATF3', 'ATG12', 'ATG5', 'ATG7', 'ATM', 'ATRX', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'AXL', 'BAD', 'BAG5', 'BARD1', 'BAX', 'BBC3', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BIRC3', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BNIP3', 'BRAF', 'BRCA1', 'BRCA2', 'BRD4', 'BTG2', 'BTK', 'SPRTN', 'CLHC1', 'CA9', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBL', 'CBX7', 'CCL2', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD24', 'CD274', 'CD34', 'CD44', 'CD79A', 'CD79B', 'CDC14A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC7', 'CDH17', 'CDH1', 'CDH2', 'CDIPT', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CENPC', 'CFL1', 'CFLAR', 'CFTR', 'CHD1', 'CHD8', 'CHEK1', 'CHEK2', 'CHKA', 'CHORDC1', 'CHUK', 'CLTCL1', 'CLTC', 'CNOT6L', 'CREB1', 'CREBBP', 'CRP', 'CSF1R', 'CSF1', 'CSK', 'CSN2', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTGF', 'CTLA4', 'CTNNB1', 'CUL1', 'CUL3', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'DAPK1', 'DAXX', 'DBN1', 'DCAF13', 'DDIT4', 'DDR2', 'DECR1', 'DEPTOR', 'DGCR8', 'DICER1', 'DLC1', 'DLG1', 'DLG4', 'DNM1L', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOLPP1', 'DUSP1', 'DUSP6', 'DUT', 'DVL1', 'DYRK1A', 'E2F1', 'E2F2', 'E2F3', 'ECSCR', 'EGFR', 'EGF', 'EGR1', 'EIF2AK2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4EBP2', 'EIF4E', 'EIF4G1', 'EML4', 'ENDOG', 'EP300', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA3', 'EPHA4', 'EPHA5', 'EPHA7', 'EPHB1', 'EPHB2', 'EPHB3', 'EPHB4', 'ERBB2', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ESR1', 'ETS1', 'ETS2', 'ETV1', 'ETV6', 'EYA2', 'EZH2', 'EZR', 'FABP4', 'FASLG', 'FASN', 'FBXW7', 'FCGR1B', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FIG4', 'FKBP1A', 'FLCN', 'FLT1', 'FLT3', 'FLT4', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXG1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FOXP3', 'FRK', 'FYN', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GCK', 'GDF10', 'GDF2', 'GFAP', 'GJA1', 'GLI1', 'GNA11', 'GNAQ', 'GNAS', 'GNRHR', 'GRASP', 'GRB2', 'GRPR', 'GSK3A', 'GSK3B', 'GSTP1', 'H1F0', 'H2AFX', 'HAVCR2', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HES1', 'HGF', 'HIF1A', 'HIST1H2BA', 'HK1', 'HK2', 'HMGA2', 'HNF4A', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA1A', 'HSPA1B', 'HSPA2', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'ID1', 'ID4', 'IDH1', 'IDH2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL17A', 'IL21', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INPP4A', 'INPP4B', 'INPP5A', 'INPP5B', 'INPP5D', 'INPP5E', 'INPP5F', 'INPP5J', 'INPP5K', 'INPPL1', 'INSRR', 'INSR', 'INS', 'IPMK', 'IPO11', 'IQGAP1', 'IRAK1', 'IRS1', 'IRS2', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'ITPR3', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUN', 'KAT2B', 'KDM5B', 'KDM5C', 'KDM6A', 'KDR', 'KEAP1', 'ATG13', 'KIF11', 'KLLN', 'KITLG', 'KIT', 'KLF17', 'KLF2', 'KLF4', 'KLK3', 'KPNA1', 'KPNA2', 'KPNA5', 'KPNA6', 'KPNA7', 'KRAS', 'KRT14', 'KRT5', 'KRT8', 'LASP1', 'LATS1', 'LATS2', 'LCK', 'LDHA', 'LEF1', 'LEP', 'LGALS3', 'LIG4', 'LOX', 'LRIG1', 'LRP1B', 'LRRK2', 'LYN', 'LYPD1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAN2C1', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K3', 'MAP2K4', 'MAP2K7', 'MAP3K1', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK4', 'MAPK6', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAP1', 'MAPT', 'MARCH2', 'MARCH3', 'MAST1', 'MAST2', 'MAST3', 'MAST4', 'MATK', 'MCL1', 'MCM2', 'MCM7', 'MCRS1', 'MDK', 'MDM2', 'MDM4', 'MECOM', 'MECP2', 'MED12', 'MEN1', 'MET', 'MGMT', 'MINPP1', 'MITF', 'MKI67', 'MKRN1', 'MLH1', 'MLH3', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT1', 'MLST8', 'MME', 'MMP2', 'MMP9', 'MOV10', 'MRAP', 'MRE11A', 'MSH2', 'MSH6', 'MTDH', 'MTMR2', 'MTOR', 'MTSS1', 'MUTYH', 'MVP', 'MYCN', 'MYC', 'MYLK', 'MYOCD', 'NANOG', 'NCKAP1', 'NCOA3', 'NCOR2', 'NDFIP1', 'NDFIP2', 'NDRG1', 'NDRG2', 'NEDD4L', 'NEDD4', 'NES', 'NF1', 'NF2', 'NFATC1', 'NFATC4', 'NFE2L2', 'NFKBIA', 'NGFR', 'NLGN3', 'NLGN4X', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR1H4', 'NR3C2', 'NRAS', 'NRP2', 'NTRK1', 'NTRK2', 'NUMB', 'OCRL', 'OLIG2', 'OTUD3', 'PALB2', 'PARD3', 'PARD6A', 'PARD6B', 'PARD6G', 'PARK2', 'PARK7', 'PARP1', 'PAX8', 'PBK', 'PBRM1', 'PCGF2', 'PCSK9', 'PDCD1', 'PDCD4', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PDK1', 'PDK2', 'PDPK1', 'PDZK1', 'PECAM1', 'PGM3', 'PGR', 'PHF6', 'PHLPP1', 'PHLPP2', 'PI3', 'PI4K2A', 'PI4K2B', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIK3R5', 'PIKFYVE', 'PINK1', 'PIP4K2A', 'PIP4K2B', 'PIP4K2C', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PIP5KL1', 'PKM', 'PLCB1', 'PLCB2', 'PLCB3', 'PLCB4', 'PLCD1', 'PLCD3', 'PLCD4', 'PLCE1', 'PLCG1', 'PLCG2', 'PLCH1', 'PLCH2', 'PLCZ1', 'PLEKHA1', 'PLEK', 'PLK1', 'PLK2', 'PLK3', 'BPIFA1', 'PMAIP1', 'PML', 'PMPCA', 'PMS1', 'PMS2', 'POLE', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPM1D', 'PPP2R1A', 'PPP2R4', 'PPP2R5A', 'PPP2R5E', 'PPP3CA', 'PPP6C', 'PRDX1', 'PREX2', 'PRKAA1', 'PRKAA2', 'PRKCI', 'PRKCZ', 'PRKDC', 'PRMT5', 'PROM1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTER', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPMT1', 'PTPN11', 'PTPN12', 'PTPN13', 'PTPN1', 'PTPRC', 'PTPRD', 'PTS', 'PXN', 'RAB7A', 'RAC1', 'RAC2', 'RAD51C', 'RAD51D', 'RAD51', 'RAD52', 'RAF1', 'RASA1', 'RASSF1', 'RB1CC1', 'RB1', 'RBL1', 'RBL2', 'RBM38', 'RBFOX2', 'RCN1', 'RECK', 'RELA', 'REL', 'REM1', 'RETN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'DROSHA', 'RNF146', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KB1', 'RPS6KB2', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'RRM1', 'RSL1D1', 'RUNX3', 'RWDD3', 'SACM1L', 'SALL4', 'SCAI', 'SCGB1D4', 'SCRIB', 'SDHB', 'SDHC', 'SERPINA1', 'SERPINA4', 'SERPINB5', 'SESN1', 'SESN2', 'SETD2', 'SGK1', 'SGK2', 'SGK3', 'SHANK2', 'SHARPIN', 'SHC1', 'SHFM1', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT5', 'SIRT6', 'SIRT7', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC2A4', 'SLC34A2', 'SLC9A3R1', 'SLC9A3R2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNCA', 'SNX27', 'SOCS1', 'SOCS3', 'SOD2', 'SOS1', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPOP', 'SPRY1', 'SPRY2', 'SRBD1', 'SRC', 'SREBF1', 'SRF', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STMN1', 'STUB1', 'STX16', 'SUCLG2', 'SUMO1', 'SYK', 'SYNJ1', 'SYNJ2', 'TACSTD2', 'TBX1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TEP1', 'TERT', 'TET1', 'TGFB1', 'TGFBR1', 'TGFBR2', 'TGM2', 'THBS1', 'TIMP1', 'TIMP3', 'TJP1', 'TLR4', 'TMEM55A', 'TMEM55B', 'TMPRSS2', 'TNFRSF10B', 'TNFSF10', 'TNF', 'TNKS2', 'TNKS', 'TNPO2', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TPM1', 'TRAF6', 'TRIM27', 'TRIM29', 'TSC1', 'TSC2', 'TTN', 'TUT1', 'TWIST1', 'TWSG1', 'TXN', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2E1', 'UBE2I', 'UBE2L3', 'UBE3A', 'ULK1', 'ULK2', 'USP10', 'USP13', 'USP18', 'USP28', 'USP7', 'USP8', 'UTF1', 'UVRAG', 'VCL', 'VDR', 'VEGFA', 'VHL', 'WDR18', 'WDTC1', 'WEE1', 'WIPI1', 'WIPI2', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT9A', 'WNT9B', 'WT1', 'WWP1', 'WWP2', 'XIAP', 'XPO1', 'XPO5', 'YAP1', 'YES1', 'YWHAB', 'YWHAZ', 'YY1', 'ZEB1', 'ZEB2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 0.7113364274317967 Spearman Correlation: 0.6483417199412224 Coefficient of Determination: 0.5058788159402041 RMSE: 0.4423545997954792 NRMSE: 0.06916653894073632 MAPE: 539.0306865715952 Pearson Correlation: -0.08396109798877952 Spearman Correlation: 0.06738745793276717 Coefficient of Determination: -5.858771798924808e+19 RMSE: 3604838811.790353 NRMSE: 861865541.0008973 MAPE: 129965823317.51917 Predictor: ElasticNet Pearson Correlation: 0.4995116530062116 Spearman Correlation: 0.47088143286412415 Coefficient of Determination: 0.20682640020053245 RMSE: 0.5604513713866209 NRMSE: 0.08763214312979765 MAPE: 413.00027492447146 Pearson Correlation: 0.1632229747077417 Spearman Correlation: 0.20668836269778929 Coefficient of Determination: -0.04614922627864626 RMSE: 0.48170303004395076 NRMSE: 0.11516832354132615 MAPE: 117.8087021549799 Predictor: RandomForests Pearson Correlation: 0.5125111971552319 Spearman Correlation: 0.47461489068240337 Coefficient of Determination: 0.15009907769068032 RMSE: 0.5801468802474421 NRMSE: 0.09071173172503198 MAPE: 328.216844770382 Pearson Correlation: 0.10373210073099749 Spearman Correlation: 0.19340245531334002 Coefficient of Determination: -0.044185092676858995 RMSE: 0.48125062154059284 NRMSE: 0.11506015912126258 MAPE: 106.7700309505359 Protein: BRCA2 Protein Interaction Partners Count: 361 x_train_column_count: 351 x_train columns: ['ABL1', 'ACHE', 'ADRB1', 'ADRB2', 'AKT1', 'ALK', 'APEX1', 'ARID1A', 'ARPC1A', 'AR', 'ATAD5', 'ATM', 'ATRIP', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'B3GALTL', 'BACH1', 'BARD1', 'BCCIP', 'BCHE', 'BDNF', 'BECN1', 'BIRC5', 'BLM', 'BMI1', 'BRCA1', 'BRCC3', 'BRE', 'BRIP1', 'SLX4', 'BUB1B', 'BUB1', 'BUB3', 'SFR1', 'RHNO1', 'RMI2', 'BABAM1', 'MMS22L', 'CASC1', 'CASC5', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCNE1', 'CDC25A', 'CDC25C', 'CDC45', 'CDC6', 'CDH1', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CENPE', 'CENPF', 'CEP55', 'CHEK1', 'CHEK2', 'CHRNA1', 'CLSPN', 'CNTROB', 'CREM', 'CSMD3', 'CTNNB1', 'CYP19A1', 'DMC1', 'DNA2', 'DSN1', 'DYNC1LI2', 'EGFR', 'EGF', 'ELAC2', 'EME1', 'EME2', 'ENAM', 'EPCAM', 'ERBB2', 'ERBB3', 'ERCC1', 'ERCC2', 'ERCC4', 'ERCC5', 'ERCC6', 'ERCC8', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM175A', 'FANCA', 'FANCB', 'FANCC', 'FANCD2', 'FANCE', 'FANCF', 'FANCG', 'FANCI', 'FANCL', 'FANCM', 'FBN1', 'FBXO18', 'FBXW7', 'FEN1', 'FGFR2', 'FHIT', 'FLNA', 'FOXM1', 'GAPDH', 'GEN1', 'SLX1B', 'H2AFX', 'HELQ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HMG20A', 'HMG20B', 'HMMR', 'HNRNPC', 'HOXB13', 'HRAS', 'HUS1', 'ITPKB', 'KAT2B', 'KAT5', 'KEAP1', 'SPIDR', 'KIF23', 'KIF4A', 'KIT', 'KLK3', 'KRAS', 'KRT5', 'LIG1', 'LIG3', 'LIG4', 'LIMD1', 'LSP1', 'MAD2L2', 'MAGED1', 'MAMSTR', 'MAP2K2', 'MAP3K1', 'MCM10', 'MCPH1', 'MDC1', 'MDM2', 'MDM4', 'MEN1', 'MGMT', 'MKI67', 'MLH1', 'MLH3', 'KMT2C', 'MND1', 'MORF4L1', 'MRE11A', 'MRPL36', 'MSH2', 'MSH3', 'MSH4', 'MSH5', 'MSH6', 'MTA2', 'FAN1', 'MUC1', 'MUS81', 'MUTYH', 'MYC', 'NBN', 'NCAPG', 'NEDD4', 'NF1', 'NHEJ1', 'NNT', 'NOTCH1', 'NSL1', 'NSMCE4A', 'OBFC1', 'OGG1', 'PALB2', 'PARG', 'PARP1', 'PARP2', 'PARP3', 'PAXIP1', 'PCNA', 'PDLIM7', 'PDS5A', 'PDS5B', 'PGR', 'PIK3CA', 'PLCB4', 'PLEC', 'PLEKHH1', 'PLK1', 'PMS1', 'PMS2', 'PNOC', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'POLN', 'POLQ', 'PRDM9', 'PRKDC', 'PRSS1', 'PSMC3IP', 'PSMD3', 'PSMD6', 'PTEN', 'RAD17', 'RAD18', 'RAD1', 'RAD21', 'RAD23B', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD52', 'RAD54B', 'RAD54L', 'RAD9A', 'RAD9B', 'RAG2', 'RASSF1', 'RBBP8', 'RBMX', 'RECQL4', 'RECQL5', 'RECQL', 'RET', 'REV1', 'REV3L', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RNF168', 'RNF8', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SKP2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCAL1', 'SMARCB1', 'SMC1A', 'SMC2', 'SMC3', 'SMC4', 'SMC5', 'SMC6', 'SMUG1', 'SNAI2', 'SP1', 'SPO11', 'STAT5A', 'STK11', 'STRA13', 'SUV39H1', 'SYCP3', 'TBCE', 'TDP1', 'TERT', 'TEX15', 'TMPRSS2', 'TNS1', 'TOP1', 'TOP2A', 'TOP3A', 'TOP3B', 'TOPBP1', 'TOX3', 'TP53BP1', 'TP53', 'TPX2', 'TRIP12', 'PRSS58', 'TTK', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2D1', 'UBE2E2', 'UBE2E3', 'UBE2N', 'UBE2T', 'UIMC1', 'USF1', 'USP11', 'USP15', 'USP1', 'USP21', 'USP4', 'UVRAG', 'VEGFA', 'VWF', 'WDR48', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WTIP', 'XPA', 'XPO1', 'XRCC1', 'XRCC2', 'XRCC3', 'XRCC4', 'XRCC5', 'XRCC6', 'ZFYVE26', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.24050065921503944 Spearman Correlation: 0.22612564022581563 Coefficient of Determination: -0.6005831827150703 RMSE: 0.24044034299195852 NRMSE: 0.16205237038791587 MAPE: 537.47302103637 Pearson Correlation: 0.0658720925150896 Spearman Correlation: 0.03214822346782949 Coefficient of Determination: -0.5129231726965511 RMSE: 0.26338366279244224 NRMSE: 0.1811579024495954 MAPE: 509.16258597915515 Predictor: ElasticNet Pearson Correlation: 0.24102446323727933 Spearman Correlation: 0.22215520746198697 Coefficient of Determination: 0.03507714293894104 RMSE: 0.1866871867089938 NRMSE: 0.12582373137047004 MAPE: 140.99168833314792 Pearson Correlation: 0.24967389169589002 Spearman Correlation: 0.19882697470510724 Coefficient of Determination: 0.028958667670824112 RMSE: 0.2110081615263528 NRMSE: 0.1451335118381396 MAPE: 136.11612061563568 Predictor: RandomForests Pearson Correlation: 0.33335584688415576 Spearman Correlation: 0.3110626053117607 Coefficient of Determination: 0.08320817424854865 RMSE: 0.18197158601795835 NRMSE: 0.12264550320677645 MAPE: 143.40265037487393 Pearson Correlation: 0.2678778281189573 Spearman Correlation: 0.24640171712942768 Coefficient of Determination: 0.048467421991942095 RMSE: 0.20887777206564415 NRMSE: 0.14366820878171263 MAPE: 136.70855170868003 Protein: CDKN2A Protein Interaction Partners Count: 612 x_train_column_count: 604 x_train columns: ['ABCC1', 'ABL1', 'ACAP1', 'ACAP2', 'ACP5', 'ACTA1', 'ACTB', 'ACTG1', 'ADAMTS9', 'ADAP1', 'AFP', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD12', 'ANXA5', 'AP3D1', 'AP3S1', 'AP3S2', 'APAF1', 'APBA1', 'APBA2', 'ARAP1', 'ARAP2', 'ARF1', 'ARF3', 'ARF4', 'ARF5', 'ARF6', 'ARFGAP1', 'ARFGAP3', 'ARFIP2', 'ARFRP1', 'ARID1A', 'ARID2', 'ARID5B', 'ARL10', 'ARL1', 'ARL2', 'ARL3', 'ARL4A', 'ARL5A', 'AR', 'ASAP1', 'ATM', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'AXIN1', 'BAP1', 'BCL2L11', 'BCL2L1', 'BCL6', 'BECN1', 'BIRC5', 'BMI1', 'BRAF', 'BRCA1', 'BRCA2', 'BUB1B', 'RGCC', 'C1QBP', 'RABL6', 'CACNA1G', 'CADM1', 'CAMK1D', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNL1', 'CD274', 'CD34', 'CD44', 'CDC123', 'CDC20', 'CDC25A', 'CDC25C', 'CDC42', 'CDC45', 'CDC5L', 'CDC6', 'CDC7', 'CDH13', 'CDH17', 'CDH1', 'CDH2', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5RAP3', 'CDK6', 'CDK7', 'CDKAL1', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDX2', 'CEACAM5', 'CEBPB', 'CEBPE', 'CHEK1', 'CHEK2', 'CHFR', 'CHKA', 'COMMD1', 'CRABP1', 'CREBBP', 'CSF1R', 'CSF1', 'CSF2', 'CTBP1', 'CTBP2', 'CTCF', 'CTLA4', 'CTNNB1', 'CTSK', 'CUL1', 'CUL3', 'CXCR4', 'CYCS', 'CYLD', 'CYTH1', 'CYTH2', 'CYTH3', 'DAB2IP', 'DAP', 'DAXX', 'DICER1', 'DIRAS3', 'DLEC1', 'DMTF1', 'DNAH3', 'DNMT1', 'DNMT3A', 'DNMT3B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EBF1', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EP300', 'EPCAM', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ETS1', 'ETV6', 'EWSR1', 'EZH1', 'EZH2', 'FAT1', 'FBXW7', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FKBP2', 'FLT3', 'FMN2', 'FN1', 'FOS', 'FOXA1', 'FOXM1', 'FOXN2', 'FOXO1', 'FOXO3', 'FTO', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GATA4', 'GATA5', 'GBF1', 'GDF15', 'GGA1', 'GGA2', 'GGA3', 'GIT1', 'GIT2', 'GLI1', 'GLTSCR2', 'GMNN', 'GNA11', 'GNAQ', 'GNAS', 'GNL3', 'GOLPH3', 'GP5', 'GSPT1', 'GSTP1', 'H2AFX', 'H2AFZ', 'H3F3A', 'H3F3B', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC9', 'HELLS', 'HGF', 'HHEX', 'HIC1', 'HIF1A', 'HIST1H2BA', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AA3', 'HIST2H2AC', 'HIST2H4A', 'HIST4H4', 'HLTF', 'HMGA2', 'HNF4A', 'HNRNPD', 'HOPX', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA4', 'HSPA9', 'HUWE1', 'ID1', 'IDH1', 'IDH2', 'IGF1R', 'IGF1', 'IGF2BP2', 'IGF2R', 'IGF2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING4', 'INS', 'IQSEC1', 'IRS1', 'ISOC2', 'ITGAM', 'JAK1', 'JAK2', 'JAK3', 'JAZF1', 'JUNB', 'JUN', 'KAT2B', 'KAT5', 'KCNJ11', 'KCNQ1', 'KDM1A', 'KDM2B', 'KDM6A', 'KDM6B', 'KDR', 'KEAP1', 'KIAA1549', 'KIT', 'KLF4', 'KRAS', 'KRT19', 'KRT20', 'KRT5', 'KRT7', 'LATS2', 'LOX', 'LRRK2', 'MACROD2', 'MAF', 'MAP2K1', 'MAP2K4', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MAX', 'MC1R', 'MCL1', 'MCM10', 'MCM2', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEN1', 'MEOX1', 'MEOX2', 'MET', 'MGMT', 'MITF', 'MKRN1', 'MLANA', 'MLH1', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT3', 'MME', 'MMP2', 'MMP7', 'MMP9', 'MOV10', 'MRAS', 'MSH2', 'MSH6', 'MTA1', 'MTAP', 'MTHFR', 'MTNR1B', 'MTOR', 'MUC1', 'MYBL2', 'MYCL', 'MYCN', 'MYC', 'MYOD1', 'KAT6A', 'NANOG', 'NCAM1', 'NCL', 'NCOR1', 'NES', 'NEUROG1', 'NF1', 'NF2', 'NFATC1', 'NFE2L2', 'NME1', 'NOTCH1', 'NOTCH2', 'NPM1', 'NRAS', 'NSUN2', 'ORC4', 'ORC5', 'OSBP2', 'P2RY8', 'PA2G4', 'PALB2', 'PARP1', 'PAX3', 'PAX5', 'PAX8', 'PBRM1', 'PCGF2', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PEX19', 'PGR', 'PHLDB1', 'PI3', 'PIAS2', 'PIGF', 'PIK3CA', 'PIK3R1', 'PIP4K2A', 'PLEKHA3', 'PLEKHA8', 'PLEK', 'PLK1', 'PMAIP1', 'PML', 'PMS2', 'POTEF', 'POU5F1', 'PPARA', 'PPARG', 'PPM1D', 'PPP1R9B', 'PPP3CA', 'PRDM2', 'PRMT6', 'PROM1', 'PRSS1', 'PSMC3', 'PSMD10', 'PSME3', 'PTCH1', 'PTEN', 'PTER', 'PTF1A', 'PTGS2', 'PTPN11', 'PTPRC', 'PTPRD', 'PXN', 'RAB11A', 'RAB5A', 'RABEP1', 'RABGEF1', 'RAC2', 'RAD51', 'RAF1', 'RAP2B', 'RARB', 'RASSF1', 'RASSF2', 'RB1', 'RBL1', 'RBL2', 'RCC1', 'RELA', 'RELB', 'REL', 'RET', 'RHOA', 'DROSHA', 'RNF2', 'RNF43', 'ROS1', 'RPL11', 'RPRM', 'RPS27A', 'RPS6KB1', 'RRAS2', 'RRAS', 'RTEL1', 'RUNX2', 'RUNX3', 'SDHC', 'SENP1', 'SENP3', 'SERPINE1', 'SERTAD1', 'SETD2', 'SFN', 'SFRP1', 'SFRP2', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SIX2', 'SKP2', 'SLC30A8', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SNAI1', 'SNAI2', 'SNCA', 'SOCS1', 'SOX2', 'SP1', 'SPEN', 'SRC', 'STAT1', 'STAT3', 'STK11', 'STK25', 'STK33', 'STMN1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUV39H1', 'SUZ12', 'SYNE1', 'SYP', 'TBL1XR1', 'TBRG1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TERT', 'TET2', 'TFDP1', 'TFPI2', 'TGFBR2', 'THADA', 'THBS1', 'TIMP3', 'TMCO1', 'TMEM115', 'TNFRSF10B', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TRADD', 'TRIM28', 'TRIP12', 'PRSS58', 'TSC2', 'TSPAN8', 'TTF1', 'TWIST1', 'TWSG1', 'TYR', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2I', 'UBE3A', 'UCHL1', 'USP7', 'UTF1', 'VEGFA', 'VHL', 'WDTC1', 'WEE1', 'WFS1', 'WHSC1', 'WIF1', 'WRN', 'WT1', 'WWOX', 'XRCC1', 'YY1', 'ZBTB17', 'ZBTB7A', 'ZEB1', 'ZFP91', 'ZNF148', 'ZNF217', 'ZNF227', 'ZNF410', 'ZNF420', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.5748848928289685 Spearman Correlation: 0.5470996116685573 Coefficient of Determination: -1.805272481445034 RMSE: 1.1181397549917593 NRMSE: 0.26105242692187136 MAPE: 1212.5247540205728 Pearson Correlation: -0.06990351396262899 Spearman Correlation: 0.16817964186311984 Coefficient of Determination: -4.641990021772984e+22 RMSE: 141453629359.93967 NRMSE: 43670658318.65014 MAPE: 6154402672427.349 Predictor: ElasticNet Pearson Correlation: 0.5351811944437903 Spearman Correlation: 0.44943607267313096 Coefficient of Determination: 0.2654828786065182 RMSE: 0.5721495028722683 NRMSE: 0.13357991755516163 MAPE: 219.22710783472508 Pearson Correlation: 0.2959817225920685 Spearman Correlation: 0.2135213656030624 Coefficient of Determination: 0.07854115344984425 RMSE: 0.6302312959804787 NRMSE: 0.1945698792814296 MAPE: 154.3309770671137 Predictor: RandomForests Pearson Correlation: 0.5057985952868698 Spearman Correlation: 0.37927473170424425 Coefficient of Determination: 0.21686894407075175 RMSE: 0.5907800027915145 NRMSE: 0.13792958600847838 MAPE: 237.21655221795368 Pearson Correlation: 0.2976444488823217 Spearman Correlation: 0.19802412569497607 Coefficient of Determination: 0.08239092227987854 RMSE: 0.6289133943337597 NRMSE: 0.19416300649370494 MAPE: 131.28501742472568 Protein: TP53 Protein Interaction Partners Count: 1000 x_train_column_count: 990 x_train columns: ['ABCB1', 'ABCC1', 'ABL1', 'ACTB', 'ACTL6A', 'ADAM17', 'AFP', 'AGT', 'AICDA', 'AIFM2', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD2', 'ANXA1', 'ANXA2', 'ANXA5', 'APAF1', 'APBB1', 'APC', 'APEX1', 'APOBEC3B', 'APP', 'ARID1A', 'ARID3A', 'AR', 'ASF1A', 'ASXL1', 'ATF2', 'ATF3', 'ATG7', 'ATM', 'ATN1', 'ATRIP', 'ATRX', 'ATR', 'ATXN3', 'AURKA', 'AURKB', 'AXIN1', 'AXL', 'BACE1', 'BAG1', 'BAG2', 'BAIAP2L1', 'BAK1', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2A1', 'BCL2L11', 'BCL2L12', 'BCL2L14', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BID', 'BIRC3', 'BIRC5', 'BIRC6', 'BLM', 'BMF', 'BMI1', 'BMX', 'BNIP3L', 'BNIP3', 'BRCA1', 'BRCA2', 'BRCC3', 'BRD1', 'BRD4', 'BRD7', 'BRE', 'BRIP1', 'BRPF1', 'BRPF3', 'BTG2', 'BTK', 'BUB1B', 'BUB1', 'RHNO1', 'RGCC', 'RMI2', 'CNOT11', 'SETD9', 'CA9', 'CABIN1', 'CABLES1', 'CAPN1', 'CARM1', 'CASP10', 'CASP1', 'CASP2', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBX2', 'CBX4', 'CBX6', 'CBX8', 'CCDC106', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNG2', 'CCNH', 'CCNK', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CD24', 'CD274', 'CD34', 'CD40LG', 'CD40', 'CD44', 'CD82', 'CDC20', 'CDC25A', 'CDC25C', 'CDH17', 'CDH1', 'CDK12', 'CDK13', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CEACAM5', 'CEBPB', 'CENPJ', 'CFL1', 'CFLAR', 'CHD3', 'CHD4', 'CHD8', 'CHEK1', 'CHEK2', 'CHUK', 'CISH', 'CITED2', 'CLSPN', 'CLU', 'CNOT10', 'CNOT1', 'CNOT2', 'CNOT3', 'CNOT4', 'CNOT6L', 'CNOT6', 'CNOT7', 'CNOT8', 'COPS5', 'CREB1', 'CREBBP', 'CRYAB', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK1G1', 'CSNK1G2', 'CSNK1G3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTCF', 'CTGF', 'CTNNB1', 'CUL4A', 'CUL7', 'CUL9', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP1A1', 'DACH1', 'DAPK1', 'DAP', 'DAXX', 'DDB1', 'DDB2', 'DDIT4', 'DDX17', 'DDX3X', 'DDX5', 'DECR1', 'DGCR8', 'DHCR24', 'DHFR', 'DIABLO', 'DICER1', 'DKK1', 'DMTF1', 'DNA2', 'DNAJA3', 'DNAJB1', 'DNMT1', 'DNMT3A', 'DNTT', 'DPYD', 'DRAM1', 'DTL', 'DUSP1', 'DUSP2', 'DYRK1A', 'DYRK2', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EEF1A1', 'EEF1A2', 'EGFR', 'EGF', 'EGR1', 'EHMT1', 'EHMT2', 'EI24', 'EIF2AK2', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4EBP1', 'ELANE', 'ELAVL1', 'ELL3', 'ELL', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHA3', 'EPHB2', 'ERBB2', 'ERBB4', 'ERCC1', 'ERCC2', 'ERCC3', 'ERCC6', 'ESR1', 'ETS1', 'ETS2', 'EWSR1', 'EXO1', 'EZH2', 'F2', 'FADD', 'AMER1', 'FAM175B', 'FANCC', 'FANCD2', 'FASLG', 'FAS', 'FBL', 'FBXO11', 'FBXO4', 'FBXW7', 'FGF1', 'FGF2', 'FGFR3', 'FHIT', 'FHL2', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FSCN1', 'FUT4', 'FZR1', 'G3BP1', 'G6PD', 'GADD45A', 'GADD45B', 'GADD45G', 'GAPDH', 'GATAD2A', 'GATAD2B', 'GDF15', 'GFI1', 'GLS2', 'GLTSCR2', 'GNL3', 'GRAMD4', 'GRB10', 'GRB14', 'GSK3B', 'GSTP1', 'GTF2H1', 'GTSE1', 'H1F0', 'H2AFX', 'HAMP', 'HCK', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC5', 'HDAC7', 'HDAC8', 'HDAC9', 'HERC5', 'HIC1', 'HIF1A', 'HIPK1', 'HIPK2', 'HIPK3', 'HIPK4', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HK2', 'HMGA1', 'HMGA2', 'HMGB1', 'HMGB2', 'HMMR', 'HMOX1', 'HNF4A', 'HNRNPK', 'HNRNPL', 'HOXA5', 'HPGDS', 'HRAS', 'HSF1', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA1A', 'HSPA1B', 'HSPA1L', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'HSPB1', 'HSPB2', 'HTT', 'HUS1', 'HUWE1', 'ICAM1', 'ID2', 'ID4', 'IDH1', 'IDH2', 'IFI16', 'IFNAR1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IGFBP7', 'IKBKB', 'IL17A', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING2', 'ING3', 'ING4', 'ING5', 'INSIG1', 'INS', 'IRF1', 'ISG15', 'ITPKB', 'JAG1', 'JAK2', 'JMY', 'JUN', 'KAT2A', 'KAT2B', 'KAT5', 'KDM1A', 'KDM6A', 'KDM6B', 'KDR', 'KHDRBS1', 'CCAR2', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KPNA2', 'KRAS', 'KRT14', 'KRT17', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'L3MBTL1', 'LAMA4', 'LEP', 'LGALS7B', 'LGALS7', 'LIF', 'LIG4', 'LIN28A', 'PIDD1', 'LRRK2', 'LYN', 'MAF1', 'MAF', 'MAGEA2', 'MAP1LC3B', 'MAP2K1', 'MAP2K3', 'MAP2K7', 'MAP3K1', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MBD3', 'MCL1', 'MCM7', 'MDC1', 'MDH1', 'MDM2', 'MDM4', 'MEAF6', 'MECOM', 'MELK', 'MET', 'MGMT', 'MIF', 'MKI67', 'MKRN1', 'MLH1', 'KMT2D', 'KMT2C', 'MMP13', 'MMP1', 'MMP2', 'MMP9', 'MOV10', 'MRE11A', 'MSH2', 'MSH6', 'MSX1', 'MT1A', 'MT2A', 'MTA1', 'MTA2', 'MTA3', 'MTOR', 'MUC1', 'MUTYH', 'MYBBP1A', 'MYB', 'MYCN', 'MYC', 'MYOCD', 'KAT8', 'KAT6A', 'NANOG', 'NBN', 'NCL', 'NCOA3', 'NCOR1', 'NCOR2', 'NDN', 'NDRG1', 'NEDD8', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFE2L2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NFKBIB', 'NFYA', 'NFYB', 'NFYC', 'NGFR', 'NLK', 'NLRC4', 'NME1', 'NOC2L', 'NOS3', 'NOTCH1', 'NOTCH3', 'NOTCH4', 'NOX4', 'NPM1', 'NQO1', 'NR1I2', 'NR2E1', 'NR3C1', 'NR4A1', 'NR4A2', 'NRAS', 'NUAK1', 'NUMB', 'NUPR1', 'OGG1', 'OLIG2', 'OPN1SW', 'OSGIN1', 'OTUB1', 'OTUB2', 'OTUD5', 'PADI4', 'PALB2', 'PARK2', 'PARK7', 'PARP1', 'PATZ1', 'PAX2', 'PAX3', 'PAX8', 'PBK', 'PBRM1', 'PCBP4', 'PCNA', 'PDCD4', 'PDCD5', 'PDGFRA', 'PDGFRB', 'PDLIM7', 'PER2', 'PERP', 'PGR', 'PHB', 'PHC1', 'PHC2', 'PHC3', 'PHF20', 'PHGDH', 'PI3', 'PIAS1', 'PIAS2', 'PIAS4', 'PIK3CA', 'PIN1', 'PKM', 'PLAGL1', 'PLAU', 'PLK1', 'PLK2', 'PLK3', 'PLK4', 'PMAIP1', 'PML', 'PMS2', 'POLI', 'POLK', 'POU4F1', 'POU4F2', 'POU5F1', 'PPARGC1A', 'PPARG', 'PPIF', 'PPM1D', 'PPP1R13B', 'PPP1R13L', 'PPP1R15A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R4', 'PPP2R5C', 'PRDM1', 'PRDM2', 'PRDX1', 'PRELID1', 'PRIMA1', 'PRKAA1', 'PRKAA2', 'PRKAB1', 'PRKAB2', 'PRKAG1', 'PRKAG2', 'PRKAG3', 'PRKCA', 'PRKCD', 'PRKCZ', 'PRKD1', 'PRKDC', 'PRKG1', 'PRMT1', 'PRMT5', 'PROM1', 'PSEN1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTBP1', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2', 'PTTG1', 'RABGGTA', 'RABGGTB', 'RAD17', 'RAD1', 'RAD50', 'RAD51', 'RAD9A', 'RAD9B', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP4', 'RBBP6', 'RBBP7', 'RBBP8', 'RBL1', 'RBL2', 'RBM38', 'RBPJ', 'RCHY1', 'RCOR1', 'RECQL4', 'RELA', 'REM1', 'REST', 'RET', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RFFL', 'RFWD2', 'RING1', 'RMI1', 'DROSHA', 'RNF20', 'RNF2', 'RNF34', 'RNF43', 'ROCK1', 'RPA1', 'RPA2', 'RPA3', 'RPL11', 'RPL22', 'RPL26', 'RPL5', 'RPRM', 'RPS14', 'RPS19', 'RPS27A', 'RPS27L', 'RPS3', 'RPS6KB1', 'RQCD1', 'RRAD', 'RRM2B', 'RRM2', 'RUNX2', 'RUNX3', 'S100A2', 'S100A4', 'S100A6', 'S100B', 'SALL4', 'SCO2', 'SDHC', 'SENP1', 'SENP3', 'SERPINB5', 'SERPINE1', 'SESN1', 'SESN2', 'SESN3', 'SETD2', 'SETD7', 'SETD8', 'SETDB1', 'SFN', 'SRSF1', 'SGK1', 'SHFM1', 'SHH', 'SHISA5', 'SIK1', 'SIN3A', 'SIN3B', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SKP2', 'SLC2A14', 'SLC2A1', 'SLC2A2', 'SLC2A3', 'SLC6A6', 'SLMO1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMG1', 'SMG7', 'SMYD2', 'SNAI1', 'SNAI2', 'SOCS1', 'SOCS3', 'SOD2', 'SORT1', 'SOX2', 'SOX4', 'SP100', 'SP1', 'SP3', 'SP7', 'SPATA18', 'SPP1', 'SQSTM1', 'SRC', 'SREBF1', 'SREBF2', 'SSRP1', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STEAP3', 'STK11', 'STMN1', 'STUB1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUMO4', 'SUPT16H', 'SUV39H1', 'SUZ12', 'SYK', 'SYP', 'TADA3', 'TAF10', 'TAF11', 'TAF12', 'TAF13', 'TAF15', 'TAF1L', 'TAF1', 'TAF2', 'TAF3', 'TAF4B', 'TAF4', 'TAF5', 'TAF6', 'TAF7L', 'TAF7', 'TAF9B', 'TBPL1', 'TBPL2', 'TBP', 'TCHP', 'TCP1', 'TDG', 'TERT', 'TET2', 'TFAM', 'TFAP2A', 'TFAP2C', 'TFDP1', 'TFF1', 'TGFB1', 'TGM2', 'THBS1', 'TIMP3', 'TLR3', 'TLR9', 'TMEM219', 'TNFAIP3', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF10C', 'TNFRSF10D', 'TNF', 'TNK2', 'TNKS1BP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOE1', 'TOP1', 'TOP2A', 'TOP3A', 'TOPBP1', 'TOPORS', 'TP53AIP1', 'TP53BP1', 'TP53BP2', 'TP53I3', 'TP53INP1', 'TP53RK', 'TP63', 'TP73', 'TPT1', 'TPX2', 'TRAF6', 'TRIAP1', 'TRIM24', 'TRIM28', 'TRIM29', 'TRIM32', 'TRIM59', 'TRIM8', 'TRRAP', 'TSC2', 'TTC5', 'TTK', 'TWIST1', 'TWIST2', 'TXN', 'TYMS', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2D1', 'UBE2E1', 'UBE2I', 'UBE2K', 'UBE2N', 'UBE2Q1', 'UBE2S', 'UBE3A', 'UBN1', 'UCHL1', 'UHRF1', 'USF1', 'USP10', 'USP15', 'USP24', 'USP3', 'USP42', 'USP7', 'UTP14A', 'VEGFA', 'VHL', 'VPRBP', 'VRK1', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WWOX', 'XAF1', 'XIAP', 'XPA', 'XPO1', 'XRCC1', 'XRCC5', 'XRCC6', 'YBX1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'YY1', 'YY2', 'ZBTB33', 'ZBTB7A', 'ZEB1', 'ZEB2', 'ZKSCAN4', 'ZNF148', 'ZNF274', 'ZNF385A', 'ZNF420', 'ZNF668', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.7172154742419186 Spearman Correlation: 0.6588368170426435 Coefficient of Determination: 0.5143864970898813 RMSE: 0.3136654947174581 NRMSE: 0.0753822385766542 MAPE: 802.7007189651979 Pearson Correlation: -0.006211422819771593 Spearman Correlation: 0.17663855319585894 Coefficient of Determination: -1.1714422001857297e+21 RMSE: 14732670206.974108 NRMSE: 5493800628.325461 MAPE: 1485627675404.8809 Predictor: ElasticNet Pearson Correlation: 0.5214464967544726 Spearman Correlation: 0.4914671641328681 Coefficient of Determination: 0.2512168306794149 RMSE: 0.38949277496919416 NRMSE: 0.09360556956721802 MAPE: 649.595282308095 Pearson Correlation: 0.3950908203820921 Spearman Correlation: 0.42256137857080517 Coefficient of Determination: 0.15224636768063482 RMSE: 0.396329011700612 NRMSE: 0.14779076317568846 MAPE: 374.4661894733151 Predictor: RandomForests Pearson Correlation: 0.49162837831620126 Spearman Correlation: 0.4870839228871597 Coefficient of Determination: 0.23327378360643658 RMSE: 0.39413184429462494 NRMSE: 0.09472046245965512 MAPE: 780.0930110388247 Pearson Correlation: 0.333064164666118 Spearman Correlation: 0.4279440486052376 Coefficient of Determination: 0.08888771164248177 RMSE: 0.4108724168876451 NRMSE: 0.15321398703341738 MAPE: 410.65369760531894 Protein: CTNNB1 Protein Interaction Partners Count: 992 x_train_column_count: 983 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACAN', 'ACP1', 'ACTA1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTN4', 'ACVR1B', 'ACVR1', 'ADAM10', 'ADCY7', 'ADIPOQ', 'AES', 'AFP', 'AHI1', 'AHR', 'AHSA1', 'AJAP1', 'AK9', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'ALPL', 'AMHR2', 'AMH', 'ANXA5', 'AP1M1', 'APC2', 'APCS', 'APC', 'APH1A', 'APH1B', 'AQP1', 'ARHGAP10', 'ARHGAP21', 'ARHGAP32', 'ARHGEF4', 'ARID1A', 'ARID2', 'ARMC7', 'ARMC8', 'ARVCF', 'ARX', 'AR', 'ASCL1', 'ASF1A', 'ASH2L', 'ASIP', 'ATF4', 'ATM', 'AURKA', 'AXIN1', 'AXIN2', 'BAG3', 'BCAR1', 'BCL2L1', 'BCL3', 'BCL6', 'BCL9L', 'BCL9', 'BDNF', 'BGLAP', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BMPR1B', 'BNIP2', 'BRAF', 'BRCA1', 'BRCA2', 'BRMS1L', 'BTRC', 'HILPDA', 'AK8', 'CA2', 'CA9', 'CABLES1', 'CACYBP', 'CALM1', 'CALM3', 'CARM1', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBLL1', 'CBL', 'CBY1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CD24', 'CD34', 'CD40', 'CD44', 'CDC27', 'CDC42', 'CDC73', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH16', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH26', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDHR5', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK8', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDON', 'CDX1', 'CDX2', 'CEBPA', 'CHD8', 'CHRD', 'CHUK', 'CITED1', 'CKAP5', 'CLCA1', 'CLDN3', 'CLDN5', 'COL1A1', 'COPS3', 'COPS5', 'COPS6', 'CREB1', 'CREBBP', 'CRKL', 'CRK', 'CRP', 'CRYAB', 'CSNK1A1L', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK2A3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNAL1', 'CTNNBIP1', 'CTNND1', 'CTNND2', 'CTTN', 'CUL1', 'CUL4A', 'CUL4B', 'CXCR4', 'CXXC4', 'DAB2', 'DACT1', 'DACT2', 'DACT3', 'DCT', 'DCX', 'DDB1', 'DDX39A', 'DDX3X', 'DDX5', 'DHODH', 'DHX9', 'DKK1', 'DKK2', 'DKK3', 'DKK4', 'DLG1', 'DLG2', 'DLG4', 'DLG5', 'DLGAP1', 'DLL4', 'DLX1', 'DNM2', 'DNMT1', 'DPYD', 'DSC1', 'DSC2', 'DSC3', 'DSG1', 'DSG2', 'DSG3', 'DSG4', 'DSP', 'DUSP6', 'DVL1', 'DVL2', 'DVL3', 'E2F3', 'ECM1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'ELAVL1', 'EMD', 'ENAH', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHB2', 'EPHB3', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EXOC3', 'EXOC4', 'EYA4', 'EZH2', 'EZR', 'F2RL2', 'FAF1', 'AMER1', 'FANCA', 'FASLG', 'FAS', 'FAT1', 'FAT4', 'FBXW11', 'FBXW7', 'FERMT2', 'FER', 'FGF10', 'FGF13', 'FGF2', 'FGF3', 'FGF4', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FLT3', 'FMN1', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC2', 'FOXG1', 'FOXL1', 'FOXL2', 'FOXM1', 'FOXN3', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FRAT1', 'FRAT2', 'FRZB', 'FSCN1', 'FSTL1', 'FSTL3', 'FURIN', 'FUS', 'FXR1', 'FYN', 'FZD10', 'FZD1', 'FZD2', 'FZD3', 'FZD4', 'FZD5', 'FZD6', 'FZD7', 'FZD8', 'FZD9', 'GAPDH', 'GATA2', 'GATA4', 'GCG', 'GDF2', 'GDNF', 'GFRA1', 'GJA1', 'GLI1', 'GLI2', 'GLI3', 'GLIS2', 'GLUL', 'GNA11', 'GNA12', 'GNA13', 'GNAQ', 'GNAS', 'GPC3', 'GRIA2', 'GRIP1', 'GSK3A', 'GSK3B', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HAS2', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC7', 'HERC5', 'HES7', 'HGF', 'HGS', 'HHEX', 'HIC1', 'HIF1A', 'HINT1', 'HIPK2', 'HIST1H1C', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HMGB1', 'HNF1A', 'HNF4A', 'HNRNPA1', 'HNRNPA2B1', 'HNRNPK', 'HNRNPM', 'HOXA10', 'HOXB4', 'HPGD', 'HRAS', 'HSP90AB1', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPD1', 'HTRA1', 'HTT', 'HUWE1', 'IBSP', 'IDH1', 'IDH2', 'IFNB1', 'IFRD1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP4', 'IHH', 'IKBKB', 'IL6', 'CXCL8', 'ILK', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IRF3', 'ISG15', 'ISL1', 'ITGAE', 'ITGB1', 'ITGB7', 'ITK', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'AJUBA', 'JUN', 'JUP', 'KANK1', 'KAT2A', 'KAT2B', 'KAT5', 'KCNN1', 'KCTD1', 'KDM1A', 'KDR', 'KIF18B', 'KIF3A', 'KIF5B', 'KIFC3', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KRAS', 'KREMEN1', 'KRIT1', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LATS2', 'LDB1', 'LDHB', 'LDLR', 'LEF1', 'LEO1', 'LGR4', 'LGR5', 'LGR6', 'LHCGR', 'LHX8', 'LIF', 'LIMA1', 'LMNA', 'LMNB1', 'LOX', 'LRP4', 'LRP5L', 'LRP5', 'LRP6', 'LRRFIP1', 'LRRK2', 'LZTFL1', 'MACF1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8IP1', 'MAPK8', 'MAPK9', 'MDFIC', 'MDFI', 'MDK', 'MDM2', 'MED12', 'MED1', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'KMT2D', 'MLLT10', 'MLLT11', 'MLLT4', 'MLLT6', 'KMT2A', 'MME', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP25', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MRAP', 'MSH2', 'MSH6', 'MSN', 'MSX1', 'MSX2', 'MTDH', 'MTOR', 'MUC13', 'MUC1', 'MUTYH', 'MYCN', 'MYC', 'MYF5', 'MYO1D', 'MYO6', 'MYO7A', 'MYOD1', 'MYOG', 'NANOG', 'NCAM1', 'NCCRP1', 'NCOA2', 'NCSTN', 'NDP', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEURL2', 'NF1', 'NF2', 'NFAT5', 'NFKB1', 'NIT1', 'NKD1', 'NLK', 'NME1', 'NOG', 'NONO', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR0B1', 'NR4A1', 'NR4A2', 'NR5A1', 'NR5A2', 'NRAS', 'NRIP1', 'NTRK1', 'NTRK2', 'NTRK3', 'NUDT5', 'NUMB', 'NUP153', 'NUTF2', 'OTX2', 'PAK1', 'PAK2', 'PAK3', 'PANK4', 'PARD3', 'PARD6A', 'PARK2', 'PARP1', 'PAX3', 'PAX6', 'PAX7', 'PAX8', 'PDGFRA', 'PDGFRB', 'PECAM1', 'PGK1', 'PGR', 'PHB', 'JADE1', 'PI3', 'PICK1', 'PIK3CA', 'PIK3R1', 'PIK3R2', 'PIN1', 'PIP5K1A', 'PIP5K1C', 'PITX2', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAG1', 'PLEKHA7', 'PLK1', 'PML', 'PMS2', 'POLE', 'PORCN', 'POTEF', 'POU5F1', 'PPARD', 'PPARG', 'PPM1A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R2B', 'PPP2R5A', 'PPP2R5B', 'PPP2R5C', 'PPP2R5D', 'PPP2R5E', 'PRKACA', 'PRKACB', 'PRKACG', 'PRKAR1A', 'PRKCA', 'PRKCG', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRL', 'PRMT1', 'PROC', 'PROM1', 'PROP1', 'PSEN1', 'PSEN2', 'PSENEN', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTEN', 'PTGES3', 'PTGS2', 'PTH1R', 'PTH', 'PTK2', 'PTK7', 'PTMA', 'PTN', 'PTPN11', 'PTPN13', 'PTPN1', 'PTPN6', 'PTPRB', 'PTPRC', 'PTPRF', 'PTPRG', 'PTPRJ', 'PTPRK', 'PTPRM', 'PTPRU', 'PTPRZ1', 'PVRL1', 'PVRL2', 'PXN', 'PYGO1', 'PYGO2', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RALGDS', 'RANBP3', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RAPGEF2', 'RAPGEF6', 'RAPSN', 'RARA', 'RARB', 'RARG', 'RARS', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP5', 'RBMX', 'RBPJ', 'RBX1', 'RELA', 'REM1', 'RET', 'RHOA', 'RIPK2', 'RNF220', 'RNF43', 'ROBO1', 'ROCK1', 'ROCK2', 'ROR2', 'RPRD1A', 'RPS27A', 'RPSA', 'RSPO1', 'RSPO2', 'RSPO3', 'RSPO4', 'RUNX2', 'RUNX3', 'RUVBL1', 'RUVBL2', 'RXRA', 'RYK', 'S100A4', 'S100A6', 'SALL1', 'SALL4', 'SATB1', 'SCRIB', 'SDHC', 'SERPINE1', 'SETD2', 'SETD7', 'SFN', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHFM1', 'SHH', 'SIAH1', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT6', 'SKP1', 'SLC6A3', 'SLC9A3R1', 'SLCO1B3', 'SLCO2A1', 'SLIT1', 'SLK', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD5', 'SMAD7', 'SMAD9', 'SMARCA2', 'SMARCA4', 'SMARCA5', 'SMARCB1', 'SMO', 'SMURF1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNX1', 'SOST', 'SOX10', 'SOX13', 'SOX17', 'SOX1', 'SOX2', 'SOX3', 'SOX4', 'SOX6', 'SOX7', 'SOX8', 'SOX9', 'SP1', 'SP7', 'SPAG9', 'SPATA13', 'SPEN', 'SPN', 'SPP1', 'SRC', 'STAT3', 'STK11', 'STRAP', 'STX4', 'SUFU', 'SUV39H1', 'SYP', 'TADA3', 'TAX1BP3', 'TAZ', 'TBL1XR1', 'TBL1X', 'TBX5', 'TBX6', 'TCF12', 'TCF3', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TFAP2A', 'TFCP2', 'TFF1', 'TFF2', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBR1', 'TGFBR2', 'TGM2', 'TJP1', 'TJP2', 'TLE1', 'TLE2', 'TLE3', 'TLE4', 'TNFRSF11B', 'TNFSF11', 'TNF', 'TNIK', 'TNKS2', 'TNKS', 'TNS1', 'TOB1', 'TOP2A', 'TP53', 'TRAF4', 'TRIM33', 'TRIM37', 'TRIP10', 'TRRAP', 'TSC2', 'TUBA1A', 'TWIST1', 'TYMS', 'T', 'UBA52', 'UBB', 'UBC', 'UBE2B', 'UBE2R2', 'UBE3A', 'UBR5', 'UCHL1', 'UMPS', 'UPRT', 'USP4', 'USP7', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VAV2', 'VAV3', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VHL', 'VIM', 'WDR64', 'WDTC1', 'WHSC1', 'WIF1', 'WISP1', 'WLS', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'WWTR1', 'XPO1', 'YAP1', 'YARS', 'YEATS4', 'YES1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'ZAP70', 'ZAR1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZIC3', 'ZNRF3', 'ZYX', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.8495358600526542 Spearman Correlation: 0.8230639567670064 Coefficient of Determination: 0.7171751325665323 RMSE: 0.4090690540175242 NRMSE: 0.08046204839054372 MAPE: 225.65075793661666 Pearson Correlation: 0.007949216361325527 Spearman Correlation: 0.14268809843650915 Coefficient of Determination: -7.473844334171906e+21 RMSE: 52992145948.818794 NRMSE: 17323922308.286896 MAPE: 1356260285306.1426 Predictor: ElasticNet Pearson Correlation: 0.6290716629030187 Spearman Correlation: 0.5887592787500426 Coefficient of Determination: 0.3639184010060973 RMSE: 0.6134712950262389 NRMSE: 0.12066705252286368 MAPE: 324.26447133518786 Pearson Correlation: 0.24883738103568054 Spearman Correlation: 0.2052718861831195 Coefficient of Determination: -0.06235903736935677 RMSE: 0.6317934821326617 NRMSE: 0.20654270559111498 MAPE: 1131.1407289455033 Predictor: RandomForests Pearson Correlation: 0.4897724753717775 Spearman Correlation: 0.461712394675593 Coefficient of Determination: 0.18055152922555362 RMSE: 0.6963036229979547 NRMSE: 0.1369597999602586 MAPE: 372.1593850839952 Pearson Correlation: 0.10519699133062345 Spearman Correlation: 0.10313096173268993 Coefficient of Determination: -0.04897246807705402 RMSE: 0.6278003126485584 NRMSE: 0.20523727897236207 MAPE: 1212.7088950138432 Protein: CCNE1 Protein Interaction Partners Count: 350 x_train_column_count: 347 x_train columns: ['ABL1', 'AKT1', 'AKT2', 'AKT3', 'ALDH18A1', 'ANAPC10', 'ANAPC13', 'ANAPC1', 'ANAPC2', 'ANAPC4', 'ANAPC5', 'ANAPC7', 'ANXA5', 'ARID1A', 'AR', 'ATM', 'AURKA', 'AURKB', 'BARD1', 'BCL2L1', 'BIRC5', 'BRCA1', 'BRCA2', 'BTG2', 'BTRC', 'BUB1B', 'BUB1', 'BUB3', 'RGCC', 'MLIP', 'CABLES1', 'CALM1', 'CAPRIN1', 'CASP3', 'CASP9', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNF', 'CCNG1', 'CCNH', 'CCNK', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CDC16', 'CDC20', 'CDC23', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC26', 'CDC27', 'CDC45', 'CDC6', 'CDC7', 'CDCA2', 'CDCA5', 'CDCA8', 'CDH1', 'CDK12', 'CDK13', 'CDK14', 'CDK15', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CENPA', 'CENPE', 'CHAF1A', 'CHD1L', 'CHEK1', 'CHEK2', 'CINP', 'CKS1B', 'CKS2', 'COPS5', 'CREBBP', 'CSK', 'CTNNB1', 'CUL1', 'CUL3', 'CUL4B', 'DBF4B', 'DBF4', 'DGCR8', 'DICER1', 'DTL', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'EBNA1BP2', 'ECT2', 'EGFR', 'EGF', 'ELAVL1', 'ELSPBP1', 'EP400', 'ERBB2', 'ERBB3', 'ERBB4', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM58A', 'FAM83H', 'FBXO5', 'FBXW7', 'FEN1', 'FGFR1', 'FGFR2', 'FGFR3', 'FOXM1', 'FZR1', 'GAPDH', 'GLI1', 'GMNN', 'GSK3B', 'H1F0', 'HDAC1', 'HEATR3', 'HERC5', 'HIST1H1A', 'HIST1H1B', 'HIST1H4A', 'HRAS', 'IFNAR1', 'IGF1R', 'IGF1', 'ITPKB', 'JUN', 'KIF11', 'KIF20A', 'KIF23', 'KIF2C', 'KPNA2', 'KRAS', 'LATS2', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'GMNC', 'MAD2L1', 'MAPK3', 'MATK', 'MAX', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDM2', 'MEGF11', 'MELK', 'MKI67', 'KMT2D', 'KMT2B', 'MNAT1', 'MRE11A', 'MTOR', 'MYBL2', 'MYC', 'NBN', 'NF1', 'NFYB', 'NMI', 'NOTCH1', 'NOTCH3', 'NPAT', 'NRAS', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PARK2', 'PARP1', 'PCBP4', 'PCNA', 'PIK3CA', 'PIK3R1', 'PKMYT1', 'PLK1', 'PLK4', 'POLA1', 'POLD1', 'PPP1R1C', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R4', 'PRC1', 'PRKAR1A', 'PRKAR2A', 'PRMT5', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB10', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSMF1', 'PTEN', 'PTGDR', 'PTK6', 'PTTG1', 'RAD51', 'RAD54L', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RBX1', 'REL', 'REM1', 'RHOA', 'RHOBTB3', 'RINT1', 'RNASE1', 'RPRD1A', 'RPS27A', 'RRM1', 'RRM2', 'RRN3', 'RSF1', 'SHFM1', 'SKP1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'ST8SIA1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STK3', 'STK4', 'TARBP1', 'TCP1', 'TERF1', 'TERT', 'TFDP1', 'TK1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TPX2', 'TTK', 'TUBG1', 'TYMS', 'UBA52', 'UBB', 'UBC', 'UBE2C', 'UBE2QL1', 'UBE2S', 'UHRF2', 'WEE1', 'WEE2', 'XIAP', 'YAP1', 'ZNF217', 'ZNF33A', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.5850897690356701 Spearman Correlation: 0.42441140015696893 Coefficient of Determination: -0.737851035988895 RMSE: 0.6886975630602679 NRMSE: 0.16620352898623642 MAPE: 175.17166813086345 Pearson Correlation: 0.0460179087357103 Spearman Correlation: 0.1802134220312155 Coefficient of Determination: -5.1048994236740295e+25 RMSE: 2607077423440.8433 NRMSE: 1135635067056.1672 MAPE: 26587475435365.73 Predictor: ElasticNet Pearson Correlation: 0.5778567364469434 Spearman Correlation: 0.4166709173464358 Coefficient of Determination: 0.30990031569602206 RMSE: 0.43398846551597176 NRMSE: 0.10473452844461997 MAPE: 84.3975207449707 Pearson Correlation: 0.31701157229976645 Spearman Correlation: 0.2455307338042523 Coefficient of Determination: 0.07635312504055136 RMSE: 0.3506818720920202 NRMSE: 0.1527559664119964 MAPE: 123.60419588964591 Predictor: RandomForests Pearson Correlation: 0.5762342053505657 Spearman Correlation: 0.4509128395622881 Coefficient of Determination: 0.3243720905655787 RMSE: 0.42941386550877286 NRMSE: 0.10363053925447616 MAPE: 88.64522872484797 Pearson Correlation: 0.3288349863583669 Spearman Correlation: 0.2782413895009337 Coefficient of Determination: 0.06360244963620132 RMSE: 0.3530941060030592 NRMSE: 0.1538067282323732 MAPE: 126.45482653620658 Protein: CCND1 Protein Interaction Partners Count: 857 x_train_column_count: 847 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTL6B', 'AFP', 'AHR', 'AKAP12', 'AKAP8', 'AKR1B10', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDOA', 'ALK', 'ANO1', 'ANXA5', 'APAF1', 'APC', 'APEX1', 'AREG', 'ARHGEF2', 'ARID1A', 'ARID1B', 'ARID2', 'ARID4A', 'AR', 'ASIP', 'ATF2', 'ATF3', 'ATF4', 'ATM', 'ATXN1', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'B2M', 'BANP', 'BARX2', 'BAX', 'BCAR1', 'BCAR3', 'BCCIP', 'BCL2A1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL3', 'BCL6', 'BCL9', 'BECN1', 'BGLAP', 'BHLHE40', 'BIRC2', 'BIRC3', 'BIRC5', 'BMI1', 'BMP4', 'BMP6', 'BRAF', 'BRCA1', 'BRCA2', 'BRD2', 'BRD4', 'BTC', 'BTG2', 'BTRC', 'RGCC', 'COPRS', 'CA9', 'CARD11', 'CARM1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBFB', 'CCDC62', 'CCL2', 'CCL5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNC', 'CCND2', 'CCND3', 'CCNDBP1', 'CCNE1', 'CCNE2', 'CCNG2', 'CCNH', 'CCNK', 'CCNL1', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CD19', 'CD22', 'CD24', 'CD34', 'CD38', 'CD44', 'CD5', 'CD79A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC6', 'CDC73', 'CDCA7L', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK12', 'CDK13', 'CDK14', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK20', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CDX2', 'CENPE', 'CEP57', 'CFLAR', 'CHEK1', 'CHEK2', 'CHKA', 'CHUK', 'CKS1B', 'CKS2', 'CLCN3', 'COL1A1', 'CR2', 'CREB1', 'CREBBP', 'CRKL', 'CRYAB', 'CSF2', 'CTBP1', 'CTGF', 'CTNNB1', 'CTNND1', 'CTTN', 'CUL1', 'CUL3', 'CUL7', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'CYR61', 'DACH1', 'DAXX', 'DDIT3', 'DDX53', 'DECR1', 'DHFR', 'DICER1', 'DKK1', 'DKK3', 'DLL1', 'DMTF1', 'DND1', 'DNMT1', 'DNMT3A', 'DNTT', 'DVL1', 'DVL2', 'DYRK1A', 'DYRK1B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EDN1', 'EEF1A1', 'EGFR', 'EGF', 'EGLN2', 'EGR1', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF3I', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4E', 'EIF4G1', 'ELAVL1', 'ELSPBP1', 'EP300', 'EPCAM', 'EPHA2', 'EPHA7', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EWSR1', 'EYA1', 'EZH2', 'FABP4', 'FADD', 'FAM58A', 'FAM83H', 'FASLG', 'FAT1', 'FBXO31', 'FBXO4', 'FBXW7', 'FBXW8', 'FGF13', 'FGF19', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FHL2', 'FIGF', 'FLCN', 'FLNA', 'FLT1', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXC1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FRZB', 'FSTL3', 'FZD1', 'FZD2', 'FZD7', 'FZD9', 'FZR1', 'GADD45A', 'GAL', 'GAPDH', 'GAST', 'GATA3', 'GATA4', 'GDF15', 'GDF2', 'GGNBP2', 'GGT1', 'GIT1', 'GJA1', 'GJB1', 'GLI1', 'GLI2', 'GLI3', 'GLTSCR2', 'GNB2L1', 'GPER1', 'GRB2', 'GREB1', 'GRM4', 'GRP', 'GSK3B', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HBEGF', 'HBZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC4', 'HEXIM1', 'HEY1', 'HGF', 'HIF1A', 'HIST1H2AA', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AH', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AC', 'HIST2H2BE', 'HIST2H4A', 'HIST4H4', 'HMGA2', 'HMOX1', 'HNF1A', 'HNF4A', 'HNRNPD', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB8', 'ICAM1', 'ID1', 'ID2', 'IFNAR1', 'IFNB1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP3', 'IGFBP5', 'IHH', 'IKBKB', 'IL10', 'IL17A', 'IL2', 'IL4', 'IL6', 'IL7', 'CXCL8', 'ILK', 'INSM1', 'INS', 'IRF1', 'IRS1', 'ISG15', 'ITGB1', 'ITPKB', 'ITPKC', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUNB', 'JUND', 'JUN', 'KAT2A', 'KAT2B', 'KDM1A', 'KDM5B', 'KDR', 'KHDRBS1', 'KIF18B', 'KIN', 'KITLG', 'KIT', 'KLF13', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KRAS', 'KRT10', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LDB3', 'LEF1', 'LEP', 'LGALS3', 'LGR5', 'LIMK2', 'LIMS1', 'LIN28B', 'LMNA', 'LMNB1', 'LOX', 'LRP5', 'LRP6', 'LYN', 'MAFB', 'MAF', 'MAML1', 'MAML2', 'MAML3', 'MAMLD1', 'MAP2K1', 'MAP2K2', 'MAP2K4', 'MAP2K7', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDK', 'MDM2', 'MDM4', 'MEN1', 'MET', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'MLXIPL', 'MME', 'MMP11', 'MMP14', 'MMP15', 'MMP1', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MNAT1', 'MOV10', 'MSH2', 'MST1', 'MTOR', 'MUC1', 'MYBL2', 'MYB', 'MYCN', 'MYC', 'MYEOV', 'MYF5', 'MYOD1', 'MYOG', 'NACA2', 'NADSYN1', 'NANOG', 'NCAM1', 'NCOA1', 'NCOA3', 'NCOR1', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NGF', 'NME1', 'NME2', 'NMI', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NQO1', 'NR0B2', 'NR1H3', 'NR2E1', 'NR3C1', 'NR4A3', 'NRAS', 'NRF1', 'NUDT21', 'ODC1', 'ORAI1', 'ORAOV1', 'ORC4', 'PAK1', 'PAK4', 'PARK2', 'PARP1', 'PAX2', 'PAX5', 'PAX6', 'PBRM1', 'PBX3', 'PCNA', 'PDCD4', 'PDGFRA', 'PDGFRB', 'PDZK1', 'PECAM1', 'PELP1', 'PGR', 'PI3', 'PI4K2A', 'PIK3CA', 'PIK3R1', 'PKLR', 'PKM', 'PLAUR', 'PLAU', 'PLK1', 'PMAIP1', 'POLR2A', 'POTEF', 'POU2F1', 'POU5F1', 'PPARG', 'PPP2R4', 'PRDM5', 'PRKACA', 'PRL', 'PRMT5', 'PRNP', 'PROM1', 'PSAT1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTCHD3', 'PTEN', 'PTF1A', 'PTGS2', 'PTHLH', 'PTH', 'PTK2', 'PTK6', 'PTPN11', 'PTPRCAP', 'PTPRC', 'PXN', 'RAD51', 'RAF1', 'RALA', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RBX1', 'RCC1', 'RELA', 'RELB', 'REL', 'REM1', 'RET', 'RHEB', 'RHOA', 'RHOC', 'RICTOR', 'RNASE1', 'DROSHA', 'RND3', 'RNMT', 'ROCK1', 'RPRD1B', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KA6', 'RPS6KB1', 'RPS6', 'RPTOR', 'RREB1', 'RSF1', 'RUNX1', 'RUNX2', 'RUNX3', 'SDC1', 'SDHC', 'SENP1', 'SERPINE1', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHC1', 'SHFM1', 'SHH', 'SIRT1', 'SIX1', 'SIX3', 'SKP1', 'SKP2', 'SLC25A16', 'SLC25A6', 'SLC2A1', 'SLC35B2', 'SLC39A4', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMO', 'SNAI1', 'SNAI2', 'SNCA', 'SNIP1', 'SNW1', 'SNX33', 'SOCS3', 'SOX11', 'SOX17', 'SOX2', 'SOX4', 'SOX6', 'SOX9', 'SP1', 'SPN', 'SPP1', 'SPRY1', 'SRC', 'SREBF1', 'STAT1', 'STAT3', 'STAT4', 'STAT5A', 'STAT5B', 'STAT6', 'STC2', 'STIM1', 'STK11', 'STK24', 'STMN1', 'SUFU', 'SULF2', 'SUV39H1', 'TAF1', 'TBP', 'TBX2', 'TCEAL7', 'TCF4', 'TCF7L2', 'TCF7', 'TERT', 'TET3', 'TFDP1', 'TFF1', 'TGFA', 'TGFB1', 'TGFBR2', 'THBS1', 'THRA', 'THRB', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLR9', 'TM4SF1', 'TMPRSS4', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF8', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP2A', 'TP53', 'TP63', 'TP73', 'TRPV2', 'TSC22D3', 'TSC2', 'TWIST1', 'TXN', 'TYMS', 'UBA52', 'UBA7', 'UBB', 'UBC', 'UBE2C', 'UBTF', 'URGCP', 'USP18', 'USP2', 'USP9X', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VIP', 'VRK1', 'WDR77', 'WDTC1', 'WEE1', 'WHSC1', 'WIF1', 'WISP1', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'XBP1', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YY1', 'ZBTB17', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.6991493803045011 Spearman Correlation: 0.665613753557415 Coefficient of Determination: -0.2768636426598501 RMSE: 0.27645775420765684 NRMSE: 0.16619840702147193 MAPE: 1414.897135213174 Pearson Correlation: 0.04208771378561394 Spearman Correlation: 0.0968164306327394 Coefficient of Determination: -2.5264670340682992e+22 RMSE: 33337822803.16928 NRMSE: 31589950824.073303 MAPE: 70851049916752.22 Predictor: ElasticNet Pearson Correlation: 0.3587777372990329 Spearman Correlation: 0.3646231788301651 Coefficient of Determination: 0.09800730822202441 RMSE: 0.23235821128465833 NRMSE: 0.13968703711910302 MAPE: 622.7882155842242 Pearson Correlation: 0.15685477721000762 Spearman Correlation: 0.12051672112460873 Coefficient of Determination: 0.022162639680876395 RMSE: 0.20740237686626342 NRMSE: 0.19652845732260374 MAPE: 424.05679849305676 Predictor: RandomForests Pearson Correlation: 0.44409035664075525 Spearman Correlation: 0.40161183257524674 Coefficient of Determination: 0.12538030664727207 RMSE: 0.22880533213496487 NRMSE: 0.13755114891907327 MAPE: 613.7457000640808 Pearson Correlation: 0.2244788390956983 Spearman Correlation: 0.13255940103577354 Coefficient of Determination: 0.039087775928271284 RMSE: 0.2055996045923471 NRMSE: 0.19482020277292134 MAPE: 444.57440354120115 Protein: ERBB2 Protein Interaction Partners Count: 663 x_train_column_count: 655 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACPP', 'ACTA2', 'ACTB', 'ACTG1', 'ADAM10', 'ADAM17', 'ADRB2', 'AFP', 'AGRN', 'AKT1S1', 'AKT1', 'AKT2', 'ALB', 'ALDH1A1', 'ALK', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'ANO1', 'ANXA2', 'ANXA5', 'AP2B1', 'APP', 'AREG', 'ARHGEF11', 'ARHGEF12', 'ARID1A', 'ARL6IP5', 'AR', 'ATM', 'ATP2B2', 'AURKB', 'AXIN1', 'BAG1', 'BARD1', 'BCAR1', 'BCAR3', 'BCAS1', 'BCL2L11', 'BCL2L1', 'BDNF', 'BECN1', 'BEST1', 'BIRC5', 'BLNK', 'BMI1', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BSG', 'BTC', 'MIEN1', 'CA9', 'CALU', 'CARTPT', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAV1', 'CBLB', 'CBLC', 'CBL', 'CCL27', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD19', 'CD22', 'CD247', 'CD24', 'CD274', 'CD28', 'CD33', 'CD34', 'CD44', 'CD46', 'CD52', 'CD68', 'CD6', 'CD80', 'CD82', 'CDC37', 'CDC42', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK4', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CEACAM5', 'CEP70', 'CHEK2', 'CHGA', 'CHKA', 'CHKB', 'CISH', 'CLDN3', 'CLDN4', 'CLDN7', 'CLTC', 'CNN1', 'COPS5', 'CPNE3', 'CREB1', 'CRKL', 'CRK', 'YBX3', 'CSF1', 'CSF2', 'CSF3', 'CSK', 'CSPG4', 'CTAG1B', 'CTLA4', 'CTNNB1', 'CTNND1', 'CTSB', 'CTSD', 'CTTN', 'CUL5', 'CXCL12', 'CXCR1', 'CXCR4', 'CYCS', 'CYP19A1', 'CYTIP', 'DCN', 'DDX41', 'DDX53', 'DHH', 'DIAPH1', 'DICER1', 'DLG4', 'DMTF1', 'DNAJA3', 'DNM2', 'DNMT1', 'DOCK1', 'DOCK7', 'DUSP6', 'E2F1', 'E2F3', 'EEA1', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EGFR', 'EGF', 'EIF3A', 'EIF4EBP1', 'EIF4E', 'ELAVL1', 'ELF3', 'EML4', 'ENO2', 'EP300', 'EPCAM', 'EPGN', 'EPHA2', 'EPS15', 'EPX', 'ERAL1', 'ERBB2IP', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ERRFI1', 'ESCO1', 'ESR1', 'ESR2', 'ESRRB', 'ETS1', 'ETS2', 'ETV4', 'ETV6', 'EZH2', 'EZR', 'FASLG', 'FASN', 'FBXW7', 'FCGR1A', 'FCGR1B', 'FCGRT', 'FGF10', 'FGF13', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FIGF', 'FLT1', 'FLT3LG', 'FN1', 'FOLH1', 'FOLR1', 'FOS', 'FOXA1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXP3', 'FREM2', 'FSIP1', 'FYN', 'GAB1', 'GABPB1', 'GAPDH', 'GATA3', 'GATA4', 'GDF2', 'GLI1', 'GLI2', 'GLS', 'GNA11', 'GNAQ', 'GNAS', 'GNRH1', 'GPER1', 'GRAP2', 'GRB2', 'GRB7', 'GSTP1', 'GZMB', 'H2AFX', 'H2AFY', 'HBEGF', 'HDAC1', 'HDAC6', 'HEATR6', 'HGF', 'HIF1A', 'HK1', 'HMGA2', 'HNF4A', 'HOXB7', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPG2', 'ICAM1', 'ID1', 'IDH1', 'IDH2', 'IFNG', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IHH', 'IL10', 'IL2', 'IL4', 'IL6R', 'IL6ST', 'IL6', 'CXCL8', 'ILK', 'INPP4B', 'INS', 'IQGAP1', 'IQSEC1', 'IRS1', 'ITGA5', 'ITGA6', 'ITGAV', 'ITGB1', 'ITGB3', 'ITGB4', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JUN', 'JUP', 'KDR', 'KITLG', 'KLK3', 'KLRK1', 'KRAS', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'L1CAM', 'LAMP1', 'LCN2', 'LDHA', 'LEP', 'LIN28A', 'LIN7A', 'LIN7B', 'LIN7C', 'LINGO1', 'LOX', 'LRIG1', 'LRPPRC', 'MAGEA1', 'MAGEA3', 'MAGED4B', 'MAGED4', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK8', 'MATK', 'MCL1', 'MDK', 'MDM2', 'MEMO1', 'MET', 'MGMT', 'MKI67', 'MLANA', 'MLH1', 'KMT2C', 'MME', 'MMP11', 'MMP14', 'MMP16', 'MMP1', 'MMP2', 'MMP7', 'MMP9', 'MPP1', 'MRAP', 'MRAS', 'MSH2', 'MSH6', 'MSLN', 'MTA1', 'MTOR', 'MUC13', 'MUC16', 'MUC1', 'MUC4', 'MUC6', 'MUCL1', 'MYBL2', 'MYCN', 'MYC', 'NANOG', 'NCAM1', 'NCL', 'NCOA1', 'NCOA3', 'NCOR1', 'NDRG1', 'NF1', 'NF2', 'NFE2L2', 'NGF', 'NISCH', 'NME1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NR1H4', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NRP1', 'NTF3', 'NTF4', 'OPCML', 'OSMR', 'PA2G4', 'PADI2', 'PAK1', 'PALB2', 'PAQR3', 'PARP1', 'PAX2', 'PCSK9', 'PDCD1LG2', 'PDCD1', 'PDCD4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PDGFRA', 'PDPN', 'PECAM1', 'PELP1', 'PEPD', 'PFKFB3', 'PGAP3', 'PGF', 'PGR', 'PI3', 'PIK3C2A', 'PIK3C2B', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIN1', 'PIP', 'PLAUR', 'PLAU', 'PLCG1', 'PLCG2', 'PLEK', 'PLG', 'PLXNB1', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPP3CA', 'PRDM10', 'PRF1', 'PRKACA', 'PRL', 'PROM1', 'PSCA', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'PTPN1', 'PTPRC', 'PTPRO', 'PTPRU', 'PTS', 'PXN', 'RAB25', 'RAD51', 'RAF1', 'RANBP2', 'RARA', 'RASA1', 'RASA2', 'RASSF1', 'RB1', 'RBPJ', 'RDX', 'RECK', 'REM1', 'REN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'S100A14', 'SCGB2A2', 'SCUBE2', 'SDC1', 'SDHC', 'SEMA3D', 'SEMA4D', 'SERPINB5', 'SERPINE1', 'SFRP1', 'PEAK1', 'SH3BGRL3', 'SH3BGRL', 'SH3TC2', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SIAH2', 'PMEL', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC4A7', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SMUG1', 'SMYD3', 'SNAI1', 'SNAI2', 'SOCS1', 'SOS1', 'SOX10', 'SOX2', 'SOX9', 'SP3', 'SPP1', 'SPRY2', 'SRCIN1', 'SRC', 'STARD3', 'STAT1', 'STAT2', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STOM', 'STUB1', 'SYP', 'TAGLN', 'TBX1', 'TERT', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TFRC', 'TGFA', 'TGFB1', 'THBS1', 'THRA', 'TIMP1', 'TJP1', 'TMPRSS2', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF4', 'TNFRSF8', 'TNFRSF9', 'TNFSF11', 'TNF', 'TNS1', 'TNS3', 'TNS4', 'TOB1', 'TOP1', 'TOP2A', 'TP53', 'TP63', 'TSC2', 'TWIST1', 'TYMS', 'TYR', 'UBA52', 'UBB', 'UBC', 'USP2', 'USP9X', 'VAV1', 'VAV2', 'VAV3', 'VCL', 'VEGFA', 'VEGFB', 'VEGFC', 'VIM', 'WASL', 'WDFY2', 'WDTC1', 'WNT10A', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7B', 'WNT9A', 'WNT9B', 'WT1', 'WWOX', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YES1', 'YY1', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 0.7802464988327787 Spearman Correlation: 0.6974561710202927 Coefficient of Determination: 0.6084243669271048 RMSE: 0.6140176686539852 NRMSE: 0.10460801551254498 MAPE: 1255.1074570934572 Pearson Correlation: 0.31952288709069915 Spearman Correlation: 0.22846026091990185 Coefficient of Determination: -0.3148854739106981 RMSE: 1.2229862574363808 NRMSE: 0.22061228397365987 MAPE: 496.3154127119228 Predictor: ElasticNet Pearson Correlation: 0.6292166538559578 Spearman Correlation: 0.5577525755018964 Coefficient of Determination: 0.3727927062701992 RMSE: 0.7771030062010823 NRMSE: 0.1323922868632268 MAPE: 1006.8415894986833 Pearson Correlation: 0.5066179564881444 Spearman Correlation: 0.4115916801854596 Coefficient of Determination: 0.2542288579020727 RMSE: 0.9210440476843924 NRMSE: 0.16614547364246923 MAPE: 257.82315200534345 Predictor: RandomForests Pearson Correlation: 0.5206059146087654 Spearman Correlation: 0.4651354798860188 Coefficient of Determination: 0.21153178472207634 RMSE: 0.8712948245539195 NRMSE: 0.14843941335228708 MAPE: 763.8775921906944 Pearson Correlation: 0.4444533970839132 Spearman Correlation: 0.3774744759273206 Coefficient of Determination: 0.15439539923527168 RMSE: 0.9807566956877486 NRMSE: 0.17691693045814066 MAPE: 170.25008412235331 Protein: ERBB3 Protein Interaction Partners Count: 245 x_train_column_count: 247 x_train columns: ['ADAM17', 'AGRN', 'AGTR2', 'AKT1', 'AKT2', 'AKT3', 'ALAS2', 'ALB', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'APIP', 'AREG', 'AR', 'BAMBI', 'BDNF', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BTC', 'CADM4', 'CASK', 'CASP3', 'CBLB', 'CBLC', 'CBL', 'CCND1', 'CCNE1', 'CD44', 'CD82', 'CDC42', 'CDH1', 'CDK4', 'CDK5', 'CDKN1B', 'CDKN2A', 'CLEC16A', 'COMMD5', 'COQ7', 'CRKL', 'CRK', 'CRYZL1', 'CSF1', 'CSK', 'CSPG5', 'CTNNB1', 'DCN', 'DHH', 'DOCK7', 'DUSP6', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EIF4EBP1', 'EIF4E', 'EML4', 'EPCAM', 'EPGN', 'EPN1', 'ERBB2IP', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'ESR2', 'FBXO9', 'FGF10', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FIGF', 'FKBP14', 'FLNA', 'FLT3LG', 'FN1', 'FOXA1', 'FOXO3', 'FREM2', 'FTSJ1', 'GAB1', 'GAPDH', 'GLE1', 'GRB2', 'GRB7', 'GRHL2', 'HBEGF', 'HGF', 'HGS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPG2', 'IGF1', 'IGF2', 'IL6ST', 'ILK', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'ITPKB', 'JAK1', 'JAK2', 'JUN', 'KDR', 'KITLG', 'KRAS', 'L1CAM', 'LAMA1', 'LAMB1', 'LAMC2', 'LIN7A', 'LIN7B', 'LIN7C', 'LRIG1', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARCH7', 'MDM2', 'MET', 'MITF', 'MMP9', 'MRPL49', 'MTOR', 'MUC1', 'MUC4', 'MYC', 'N4BP1', 'NDRG1', 'NEDD4L', 'NEDD4', 'NF1', 'NGF', 'NICN1', 'NOTCH1', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NTF3', 'NTF4', 'OAT', 'PA2G4', 'PARK7', 'PCSK9', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PGR', 'PI3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIP5K1C', 'PLCG1', 'PLCG2', 'PPP1R9A', 'PRKACA', 'PTEN', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN22', 'PTPN2', 'RASA1', 'RASA2', 'REM1', 'RGS4', 'RHOA', 'RHOC', 'RNF41', 'ROR1', 'RRAS2', 'SH2B3', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SLC25A16', 'SMAD4', 'SNAI2', 'SOS1', 'SOX10', 'SOX2', 'SPARC', 'SPRY2', 'SRC', 'STAT3', 'STAT5A', 'STAT5B', 'SYN3', 'TCF7L2', 'TGFA', 'TMEFF2', 'TNFRSF13C', 'TNS1', 'TP53', 'USP8', 'VAV1', 'VAV2', 'VAV3', 'VEGFA', 'VEGFB', 'VEGFC', 'WNT1', 'WNT5A', 'ZEB1', 'ZNF217', 'KRBOX4', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.46406997202250544 Spearman Correlation: 0.44509120119317414 Coefficient of Determination: 0.1493485129419332 RMSE: 0.4159648172950053 NRMSE: 0.1508282904179694 MAPE: 300.9398058076469 Pearson Correlation: 0.21607718895774183 Spearman Correlation: 0.24130828048573388 Coefficient of Determination: -0.19762699701362774 RMSE: 0.5414044181230071 NRMSE: 0.15052600767999086 MAPE: 215.33370529797517 Predictor: ElasticNet Pearson Correlation: 0.4217945423886948 Spearman Correlation: 0.4222128207370473 Coefficient of Determination: 0.16660762996222667 RMSE: 0.4117233771238505 NRMSE: 0.14929034984384706 MAPE: 226.05984305705357 Pearson Correlation: 0.14908737402559216 Spearman Correlation: 0.18012511424874805 Coefficient of Determination: -0.006639309315713771 RMSE: 0.4963613414873639 NRMSE: 0.13800273621668557 MAPE: 153.74139356683983 Predictor: RandomForests Pearson Correlation: 0.42275738905512117 Spearman Correlation: 0.4316541041475106 Coefficient of Determination: 0.14799325860117918 RMSE: 0.416296042112221 NRMSE: 0.15094839209687946 MAPE: 236.54657650661633 Pearson Correlation: 0.0970344198435602 Spearman Correlation: 0.13741626893178113 Coefficient of Determination: -0.01532487720068798 RMSE: 0.49849811504270414 NRMSE: 0.13859682075281965 MAPE: 152.29569179010474 Fold: 4 Protein: RB1 Protein Interaction Partners Count: 369 x_train_column_count: 366 x_train columns: ['AATF', 'ABCC1', 'ABL1', 'ACTL6A', 'ACTL6B', 'AFAP1', 'AHR', 'AKT1', 'ANXA5', 'ARID1A', 'ARID1B', 'ARID4A', 'ARMCX1', 'ARMCX2', 'ARMCX3', 'ARNT', 'AR', 'ASF1A', 'ATF2', 'ATM', 'AURKB', 'BCR', 'BDP1', 'BGLAP', 'BRCA1', 'BRF1', 'FAM208A', 'C4BPA', 'CABIN1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CBFB', 'CBX1', 'CBX4', 'CBX5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNT2', 'CDC25A', 'CDC27', 'CDC6', 'CDH1', 'CDK14', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPA', 'CEBPB', 'CEBPD', 'CEBPE', 'CHEK1', 'CHEK2', 'CLNK', 'COL1A1', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUX1', 'DCAF10', 'DGKZ', 'DNAJA3', 'DNMT1', 'DNMT3A', 'DUSP1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EGFR', 'EGF', 'EID1', 'EIF2AK1', 'EIF2AK4', 'AGO2', 'ELF1', 'ENC1', 'EP300', 'ERBB2', 'ESD', 'ESR1', 'ESR2', 'EZH2', 'FBXW7', 'FMO5', 'FOS', 'FOXM1', 'FRK', 'FZR1', 'G6PD', 'GAPDH', 'GATA1', 'GJA1', 'GNB2L1', 'GRB2', 'GSC', 'GTF2H1', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HARS2', 'HARS', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC8', 'HDC', 'HES1', 'HIF1A', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HIST4H4', 'HMGA1', 'HMGA2', 'HRAS', 'HSP90AA1', 'HSPA1A', 'HSPA8', 'ID2', 'IFI16', 'INS', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'KDM2A', 'KDM4A', 'KDM5A', 'KDM5B', 'PPP1R26', 'KIF11', 'KRAS', 'KRT10', 'KRT14', 'KRT5', 'L3MBTL2', 'L3MBTL1', 'LIMD1', 'LIN52', 'LIN54', 'LIN9', 'LMNA', 'LOR', 'LPAR6', 'MAF', 'MAP2K7', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEF2C', 'MORF4L1', 'MRFAP1', 'MRPL11', 'MRPS18B', 'MSH6', 'MTL5', 'MYBL2', 'MYC', 'MYOD1', 'NACC2', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NCR1', 'NDC80', 'NEO1', 'NFYA', 'NFYB', 'NFYC', 'NGF', 'NOTCH1', 'NPM1', 'NRAS', 'ORC1', 'PA2G4', 'PAX2', 'PAX3', 'PAX5', 'PAX6', 'PAX8', 'PCNA', 'PELP1', 'PGR', 'PHB', 'PHF21B', 'PIAS4', 'PIK3CA', 'PIK3R1', 'PIK3R3', 'PLK1', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPIA', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP1R3A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R3B', 'PPRC1', 'PRB1', 'PRB3', 'PRB4', 'PRDM2', 'PRH1', 'PRH2', 'PRIM1', 'PRIM2', 'PRKCB', 'PRMT2', 'PSMA7', 'PSMC1', 'PSMD10', 'PTEN', 'PTGDR', 'RAF1', 'RB1CC1', 'RBAK', 'RBBP4', 'RBBP5', 'RBBP6', 'RBBP7', 'RBBP8', 'RBBP9', 'RBL1', 'RBL2', 'RBFOX2', 'RFC1', 'RPS6KB1', 'RUNX2', 'S100A6', 'SETD1B', 'SETD7', 'SIRT1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMC1A', 'SMC2', 'SMC4', 'SMC5', 'SMYD2', 'SNW1', 'SP100', 'SP1', 'SP3', 'SPI1', 'STAM', 'STAT3', 'SUV39H1', 'SUV420H2', 'SUZ12', 'TAF1', 'TBP', 'TERT', 'TFAP2A', 'TFDP1', 'TFDP3', 'TGM2', 'THAP1', 'TMPO', 'TNS1', 'TOP2A', 'TP53BP1', 'TP53', 'TP73', 'TRDMT1', 'TRIM27', 'TTK', 'UBE2I', 'UBE3A', 'UBL4A', 'UBN1', 'UBR4', 'UBTF', 'UHRF1', 'USP4', 'USP7', 'VEGFA', 'VPS39', 'WDR59', 'WDR73', 'WEE1', 'WWTR1', 'YAP1', 'YY1', 'ZBTB16', 'ZBTB7A', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.1386641218534559 Spearman Correlation: 0.11693640603593031 Coefficient of Determination: -5.685849514024443 RMSE: 0.6503318193291611 NRMSE: 0.2378334623058664 MAPE: 3203.032939532197 Pearson Correlation: -0.14380875857842457 Spearman Correlation: -0.18260892310843385 Coefficient of Determination: -3.7306709151892923e+25 RMSE: 1007088500705.6377 NRMSE: 964902943994.2108 MAPE: 40969666071280.336 Predictor: ElasticNet Pearson Correlation: 0.2616195066425441 Spearman Correlation: 0.25506163698347695 Coefficient of Determination: 0.04743821794623593 RMSE: 0.24547274637195252 NRMSE: 0.08977206932853735 MAPE: 193.32376223173108 Pearson Correlation: 0.025288241886710278 Spearman Correlation: 0.03540544687209975 Coefficient of Determination: -0.09286445432879131 RMSE: 0.17236826759475612 NRMSE: 0.16514799715896614 MAPE: 105.4710897751892 Predictor: RandomForests Pearson Correlation: 0.3912826734930435 Spearman Correlation: 0.33352790032049706 Coefficient of Determination: 0.07882438203197994 RMSE: 0.2413948064916824 NRMSE: 0.08828072209321329 MAPE: 204.76248804867456 Pearson Correlation: -0.0914566923654047 Spearman Correlation: -0.04143708065122316 Coefficient of Determination: -0.13225827888924258 RMSE: 0.17544739278758328 NRMSE: 0.16809814201853301 MAPE: 106.07212844967025 Protein: CDH1 Protein Interaction Partners Count: 834 x_train_column_count: 823 x_train columns: ['ABCB1', 'ABCG2', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTR3', 'ACVR1B', 'ADAM10', 'ADAM15', 'ADAM17', 'ADAM9', 'AFP', 'AIMP1', 'AJAP1', 'AKAP9', 'AKT1', 'AKT2', 'AKTIP', 'ALB', 'ALCAM', 'ALDH1A1', 'ALDH3A1', 'ALK', 'AMOTL2', 'ANAPC4', 'ANAPC7', 'ANO1', 'ANXA2', 'ANXA5', 'AP1M1', 'AP1M2', 'APC2', 'APC', 'AQP1', 'AQP5', 'AREG', 'ARF6', 'ARHGAP31', 'ARID1A', 'ARL2BP', 'ARMC7', 'ARPC1A', 'ARPC2', 'ARRB2', 'ARVCF', 'AR', 'CLMP', 'ASF1A', 'ATF2', 'ATF3', 'ATM', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BAG3', 'BANP', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL6B', 'BCL9L', 'BCORL1', 'BMI1', 'BMP2', 'BMP4', 'BMP6', 'BMP7', 'BNIP3', 'BRCA1', 'BRCA2', 'BSG', 'BTBD7', 'BTC', 'BTF3', 'ANAPC15', 'CA2', 'CA9', 'CALCA', 'CALR', 'CAPN1', 'CAPNS1', 'CASP3', 'CASP8', 'CASP9', 'CASS4', 'CAV1', 'CBLL1', 'CBL', 'CBX7', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CCR7', 'CD1A', 'CD1B', 'CD1C', 'CD1E', 'CD207', 'CD24', 'CD274', 'CD276', 'CD2AP', 'CD34', 'CD44', 'CD46', 'CD68', 'CD82', 'CDC16', 'CDC23', 'CDC27', 'CDC42', 'CDC6', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH24', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK14', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN3', 'CDX2', 'CEACAM5', 'CFL1', 'CGN', 'CHGA', 'CHL1', 'CLCA2', 'CLDN1', 'CLDN2', 'CLDN3', 'CLDN4', 'CLDN5', 'CLDN7', 'CNTN1', 'COL1A1', 'CORO1C', 'CRB3', 'CREB1', 'CREBBP', 'CRYAB', 'YBX3', 'CSDC2', 'CSE1L', 'CSF2', 'CSNK2A1', 'CSNK2A2', 'CST5', 'CTBP1', 'CTBP2', 'CTCF', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTSL', 'CTTN', 'CXCL12', 'CXCL1', 'CXCR4', 'CYP1B1', 'DAAM1', 'DAB2IP', 'DACH1', 'DAPK1', 'DAP', 'DDR1', 'DDR2', 'DDX3X', 'DICER1', 'DKK1', 'DLC1', 'DLG1', 'DLG5', 'DNM2', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOT1L', 'DPAGT1', 'DPEP1', 'DSP', 'DUOX1', 'DUSP4', 'DVL1', 'DVL2', 'E2F1', 'ECT2', 'EDN1', 'EFEMP1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'EHD1', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'ELAVL1', 'ELF3', 'ENAH', 'ENG', 'EP300', 'EPB41L3', 'EPCAM', 'EPHA10', 'EPHA1', 'EPHA2', 'EPPK1', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ESRP1', 'ESRP2', 'ETS1', 'ETS2', 'EXOC3', 'EXOC4', 'EYA2', 'EZH2', 'EZR', 'F11R', 'F2RL2', 'SUPT20H', 'FBXL5', 'FER', 'FGF10', 'FGF13', 'FGF17', 'FGF19', 'FGF2', 'FGF4', 'FGF5', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FMN1', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC1', 'FOXC2', 'FOXJ2', 'FOXK2', 'FOXL1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXQ1', 'FRMPD2', 'FSCN1', 'FUT4', 'FXYD5', 'FYN', 'FZD1', 'FZD4', 'FZD7', 'FZR1', 'G6PD', 'GAB2', 'GABPA', 'GADD45A', 'GAPDH', 'GAS6', 'GATA1', 'GATA3', 'GATA4', 'GATA6', 'GDNF', 'GFRA1', 'GGT1', 'GJA1', 'GJB1', 'GJB2', 'GKN2', 'GLI1', 'GLI2', 'GMNN', 'GNA12', 'GNA13', 'GNB2L1', 'GNL3', 'GPA33', 'GRB2', 'GRHL2', 'GRHL3', 'GSK3B', 'GSN', 'GSTP1', 'H2AFZ', 'HAVCR2', 'HBEGF', 'HDAC1', 'HDAC2', 'HEPACAM', 'HES1', 'HGF', 'HGS', 'HIF1A', 'HMGA2', 'HNF4A', 'HOXB4', 'HOXD10', 'HPGDS', 'HPGD', 'HRAS', 'HSP90AA1', 'HSPA5', 'ICAM1', 'ID1', 'ID2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP3', 'IL10', 'IL15', 'IL17A', 'IL1B', 'IL24', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IQSEC1', 'IRS1', 'IRS2', 'ITGA5', 'ITGA6', 'ITGAE', 'ITGAM', 'ITGB1', 'ITGB4', 'ITGB7', 'ITPKB', 'IVL', 'JAG1', 'JAK2', 'AJUBA', 'JUN', 'JUP', 'KDM1A', 'KDM6A', 'KDR', 'KEAP1', 'KIFC3', 'KIT', 'KLF4', 'KLF5', 'KLF8', 'KLK3', 'KLK7', 'KLRG1', 'KRAS', 'KRT10', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'KRT9', 'LAMA1', 'LAMB1', 'LAMC2', 'LASP1', 'LATS1', 'LATS2', 'LCN2', 'LEF1', 'LEP', 'LGALS3', 'LGALS4', 'LGALS9', 'LGR5', 'LIF', 'LIMA1', 'LIN28A', 'LIPG', 'LLGL2', 'LMNA', 'LOR', 'LOXL2', 'LOXL3', 'LOX', 'LRP5', 'LRP6', 'LY6K', 'MACC1', 'MACROD1', 'MAD2L2', 'MAGI1', 'MAP2K1', 'MAP2K7', 'MAP4K5', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARK2', 'MARVELD2', 'MCAM', 'MCL1', 'MDM2', 'MED1', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGAT5', 'MGMT', 'MKI67', 'MLH1', 'MLLT4', 'MME', 'MMP11', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP1', 'MMP25', 'MMP27', 'MMP2', 'MMP3', 'MMP7', 'MMP8', 'MMP9', 'MPP5', 'MRAP', 'MSH2', 'MSN', 'MT1G', 'MTA1', 'MTA3', 'MTBP', 'MTDH', 'MTOR', 'MUC1', 'MUC4', 'MYCN', 'MYC', 'MYH6', 'MYO6', 'MYO7A', 'NANOG', 'NCAM1', 'NCOA1', 'NCSTN', 'NDRG1', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEUROG3', 'NF2', 'NFE2L2', 'NFIC', 'NKD2', 'NME1', 'NOG', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NR2F1', 'NRP2', 'NUDT21', 'NUMBL', 'NUMB', 'NUP98', 'NUTF2', 'OTUB1', 'OVOL1', 'OVOL2', 'PARD3', 'PARD6A', 'PAX2', 'PAX5', 'PAX6', 'PAX8', 'PCSK9', 'PDCD4', 'PDGFRB', 'PDPN', 'PEBP1', 'PECAM1', 'PGR', 'PHLPP1', 'PI3', 'PIK3CA', 'PIK3R1', 'PIP5K1A', 'PIP5K1C', 'PIP', 'PIR', 'PITX1', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAUR', 'PLAU', 'PLCD1', 'PLEKHA7', 'PLG', 'PODXL', 'POLR2C', 'POSTN', 'POTEF', 'POU5F1', 'PPARA', 'PPARGC1A', 'PPARG', 'PPL', 'PPP6C', 'PRAME', 'PRDM10', 'PRKAR1A', 'PRKCA', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRKG1', 'PRMT5', 'PROC', 'PROM1', 'PRSS8', 'PSEN1', 'PTCH1', 'PTEN', 'PTF1A', 'PTGS2', 'PTK2', 'PTPN11', 'PTPN14', 'PTPRC', 'PTPRF', 'PTPRJ', 'PTPRM', 'PTPRS', 'PTPRT', 'PTPRU', 'PTRH2', 'PVRL1', 'PVRL2', 'PVR', 'PXN', 'RAB11A', 'RAB25', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RACGAP1', 'RAF1', 'RALA', 'RALBP1', 'RALGDS', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RARB', 'RASSF1', 'RB1', 'RBM4', 'RCOR1', 'RDX', 'REM1', 'RET', 'RHOA', 'RHOB', 'RHOC', 'RHOD', 'RICTOR', 'RND3', 'ROCK1', 'ROCK2', 'RPS6KB1', 'RPTOR', 'RRM2', 'RUNX2', 'RUNX3', 'S100A14', 'S100A4', 'S100A8', 'SATB1', 'SCRIB', 'SDC1', 'SDC4', 'SDHC', 'SELE', 'SELL', 'SELP', 'SEMA3C', 'SEMA3F', 'SENP1', 'SERPINB4', 'SERPINB5', 'SERPINE1', 'SFN', 'SFRP1', 'SFRP2', 'SFTPC', 'SHH', 'SIK1', 'SIN3A', 'SIRT1', 'SIRT2', 'SIRT4', 'SIRT7', 'SIX1', 'SIX2', 'SKIL', 'SKP2', 'SLC2A1', 'SLC39A6', 'SLC6A3', 'SLC9A3R1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SNAI1', 'SNAI2', 'SNAI3', 'SNX16', 'SNX1', 'SOX10', 'SOX17', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPARC', 'SPDEF', 'SPINT1', 'SPP1', 'SPRY1', 'SRCIN1', 'SRC', 'SRXN1', 'ST14', 'ST7L', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STX4', 'STYK1', 'SUCLG2', 'SUMO1', 'SUZ12', 'SYNJ2', 'SYP', 'TACC3', 'TACSTD2', 'TATDN1', 'TBX1', 'TBX3', 'TCF15', 'TCF4', 'TDGF1', 'TERT', 'TET2', 'TFF1', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBI', 'TGFBR1', 'TGFBR2', 'THBS1', 'THEM4', 'THUMPD1', 'THY1', 'TIAM1', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLN1', 'TLR4', 'TMPRSS2', 'TMPRSS4', 'TNFRSF6B', 'TNF', 'TNK2', 'TNS1', 'TP53BP1', 'TP53BP2', 'TP53', 'TRIM21', 'TRIM29', 'TRIM44', 'TRIP10', 'TRPS1', 'TSPYL2', 'TWIST1', 'TWIST2', 'TYRP1', 'T', 'UBE2I', 'UBE2S', 'USP48', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VEZT', 'VHL', 'VIM', 'VIPAS39', 'VPS33B', 'VTN', 'WASL', 'WDFY2', 'WDTC1', 'WIF1', 'WISP1', 'WISP3', 'WNT10A', 'WNT10B', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT9A', 'WNT9B', 'WT1', 'XIAP', 'YAP1', 'YBX1', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 0.8192488475438632 Spearman Correlation: 0.7557053022239044 Coefficient of Determination: 0.6707342026776542 RMSE: 0.642107560913113 NRMSE: 0.10224317074505795 MAPE: 476.0063269272392 Pearson Correlation: 0.11957987510793716 Spearman Correlation: 0.3011591195887608 Coefficient of Determination: -2.2557401168746742e+20 RMSE: 17519011098.955765 NRMSE: 3178224864.655812 MAPE: 642732624408.3527 Predictor: ElasticNet Pearson Correlation: 0.6862894762567048 Spearman Correlation: 0.6387317278679866 Coefficient of Determination: 0.43876135288446727 RMSE: 0.8383169709501318 NRMSE: 0.1334857123897538 MAPE: 517.9063782187618 Pearson Correlation: 0.4511172565312287 Spearman Correlation: 0.4343021733438074 Coefficient of Determination: 0.1792067161898645 RMSE: 1.0567735948462456 NRMSE: 0.19171539400715604 MAPE: 338.1851526668231 Predictor: RandomForests Pearson Correlation: 0.6140011694270628 Spearman Correlation: 0.5811434138849094 Coefficient of Determination: 0.3739781899122391 RMSE: 0.8853789769318852 NRMSE: 0.14097942373362077 MAPE: 364.20924160311137 Pearson Correlation: 0.656690347420941 Spearman Correlation: 0.4201659518123137 Coefficient of Determination: 0.3672129182973659 RMSE: 0.9278843682745416 NRMSE: 0.1683328558968364 MAPE: 230.49579658071266 Protein: CDH2 Protein Interaction Partners Count: 472 x_train_column_count: 466 x_train columns: ['ABCG2', 'ABL1', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTR3', 'ADAM10', 'ADH1A', 'AFP', 'AHSG', 'AKT1', 'AKT3', 'ALB', 'ALCAM', 'ALDH1A1', 'AMBN', 'AMELX', 'AMOTL1', 'AMTN', 'ANGPT1', 'ANO8', 'ANXA5', 'APC2', 'APC', 'APLP2', 'APOA1', 'APOA2', 'APOA5', 'APOB', 'APOE', 'APOL1', 'APPL1', 'APP', 'ARHGAP32', 'ARMC7', 'ARPC5', 'ARVCF', 'AR', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BCL2L1', 'BDNF', 'BMI1', 'BMP15', 'BMP2', 'BMP4', 'BMP7', 'BNIP2', 'BOC', 'BPIFB2', 'RGCC', 'GSKIP', 'C3', 'C4A', 'CABLES1', 'CADM1', 'CALU', 'CASP3', 'CAV1', 'CBLL1', 'CCNA2', 'CCNB1', 'CCND1', 'CD24', 'CD34', 'CD44', 'CD80', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK4', 'CDK5', 'CDK6', 'CDKN2A', 'CDON', 'CDX2', 'CEBPZ', 'CFL1', 'CHGB', 'CHL1', 'CHRDL1', 'CKAP4', 'CLDN11', 'CLDN3', 'CLDN4', 'CLDN7', 'CORT', 'CP', 'CREBBP', 'CRP', 'CSF1', 'CSK', 'CST3', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTTN', 'CXCL12', 'CXCR4', 'CYLD', 'CYR61', 'DBN1', 'DDR1', 'DDR2', 'DKK1', 'DLG4', 'DLG5', 'DMP1', 'DNAJC3', 'DSP', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EFNB2', 'EFNB3', 'EGFR', 'EGF', 'EHMT2', 'EIF2AK3', 'ENAM', 'ENG', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA4', 'EPHB2', 'EPS8', 'ERBB2', 'ERBB4', 'ESR1', 'ESRP1', 'EXOC4', 'EZH2', 'EZR', 'F11R', 'F5', 'EVA1A', 'FAM20A', 'FAM20C', 'FBN1', 'FER', 'FGA', 'FGF13', 'FGF23', 'FGF2', 'FGFR1', 'FGFR4', 'FGG', 'FN1', 'FOXC2', 'FOXD3', 'FOXO1', 'FOXP4', 'FSTL1', 'FSTL3', 'FUCA2', 'GAA', 'GAPDH', 'GAS6', 'GATA4', 'GFAP', 'GJA10', 'GJA1', 'GJA3', 'GJB6', 'GJC1', 'GJC3', 'GJD3', 'GJD4', 'GLI1', 'GOLM1', 'GPC3', 'GRIA1', 'GRIA2', 'HGF', 'HMGA2', 'HNF4A', 'HRAS', 'HRC', 'HSP90B1', 'HSPA5', 'IARS2', 'IGF1R', 'IGF1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL1B', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'INVS', 'IQGAP1', 'ISL1', 'ITGA6', 'ITGB1', 'ITIH2', 'ITPKB', 'JAG1', 'JAM3', 'JUN', 'JUP', 'KCNA5', 'KDR', 'KIAA2022', 'KIF5B', 'KIT', 'KLF4', 'KNG1', 'KRAS', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT8', 'KTN1', 'L1CAM', 'LAMB1', 'LAMB2', 'LAMC1', 'LEF1', 'LGALS1', 'LRP5', 'LRP6', 'LRRC7', 'LTBP1', 'LTBP3', 'MAP1B', 'MAP2K6', 'MAP2K7', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MATN3', 'MBTPS1', 'MCAM', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEPE', 'MET', 'MFGE8', 'MFI2', 'MGAT4A', 'MIA3', 'MKI67', 'MLLT4', 'MMP14', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MPDZ', 'MPP5', 'MRAP', 'MRPL49', 'MSLN', 'MSN', 'MTHFD1', 'MUC1', 'MUC4', 'MXRA8', 'MYC', 'MYO10', 'MZF1', 'NANOG', 'NCAM1', 'NCSTN', 'NDRG1', 'NENF', 'NES', 'NFASC', 'NGF', 'NLGN1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTUM', 'NRCAM', 'NT5C', 'NT5E', 'NTRK2', 'NUCB1', 'NUMBL', 'NUMB', 'OLFM3', 'P4HB', 'PARD3', 'PAX6', 'PCSK9', 'PC', 'PDGFRB', 'PDIA4', 'PDIA6', 'PECAM1', 'PENK', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PITX2', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PNPLA2', 'POU5F1', 'PPT2', 'PRKCDBP', 'PRKCSH', 'PROC', 'PROM1', 'PRPH', 'PRSS23', 'PSEN1', 'PTEN', 'PTK2', 'PTPN11', 'PTPN1', 'PTPN2', 'PTPRC', 'PTPRS', 'PVRL1', 'PVRL2', 'PVRL3', 'PXN', 'QSOX1', 'RAB11FIP1', 'RAB3D', 'RAB5A', 'RAC1', 'RCN1', 'RELN', 'REM1', 'RHOA', 'RHOB', 'RHOC', 'ROBO1', 'PTBP3', 'RPS6KB1', 'RUNX2', 'S100A14', 'S100A4', 'SARS2', 'SCARB2', 'SCG2', 'SCG3', 'SDC2', 'SEMA3A', 'SENP3', 'SERPINA10', 'SERPINA1', 'SERPINC1', 'SERPIND1', 'SERPINE1', 'SHH', 'SHISA5', 'SIRT7', 'SKP1', 'SLC2A1', 'SLC9A3R1', 'SLIT1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SNAI1', 'SNAI2', 'SNAI3', 'SOX10', 'SOX18', 'SOX1', 'SOX2', 'SOX4', 'SOX9', 'SP7', 'SPAG9', 'SPARCL1', 'SPARC', 'SPP1', 'SPP2', 'SRC', 'ST6GALNAC5', 'STAT3', 'STC2', 'SYP', 'TBX1', 'TCF3', 'TEK', 'TF', 'TGFB1', 'TGFBR1', 'TGM2', 'TGOLN2', 'THY1', 'TIMP1', 'TJP1', 'TJP3', 'TMEM132A', 'TNC', 'TNF', 'TNNT1', 'TP53', 'TRPS1', 'TSC2', 'TWIST1', 'TWIST2', 'USP9X', 'VANGL2', 'VCAM1', 'VCAN', 'VCL', 'VEGFA', 'VGF', 'VIM', 'VTN', 'VWA1', 'WFS1', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7A', 'XIRP1', 'ZBTB16', 'ZEB1', 'ZEB2', 'ZSCAN1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.6150955385203761 Spearman Correlation: 0.5884907139343203 Coefficient of Determination: 0.2711791647519344 RMSE: 0.3238664594356913 NRMSE: 0.11735142381175859 MAPE: 3276.9209403576588 Pearson Correlation: -0.09696393808195869 Spearman Correlation: -0.0030301481088211104 Coefficient of Determination: -1.6694995261732879e+22 RMSE: 43061138090.143105 NRMSE: 22213867612.842587 MAPE: 149312877954565.56 Predictor: ElasticNet Pearson Correlation: 0.3706166982341064 Spearman Correlation: 0.3956559423751471 Coefficient of Determination: 0.11583104656386334 RMSE: 0.3567165132138157 NRMSE: 0.1292544797499151 MAPE: 1366.9461047389989 Pearson Correlation: 0.18872014429450062 Spearman Correlation: 0.18285764161647902 Coefficient of Determination: 0.0016765150906111748 RMSE: 0.3329875512382435 NRMSE: 0.17177765632776373 MAPE: 183.2768490091821 Predictor: RandomForests Pearson Correlation: 0.3961198454064427 Spearman Correlation: 0.37983966432108296 Coefficient of Determination: 0.1309181102776089 RMSE: 0.3536599927900748 NRMSE: 0.12814696455905314 MAPE: 1111.043726158635 Pearson Correlation: 0.18455697343118993 Spearman Correlation: 0.22541705684260077 Coefficient of Determination: -0.02982724092809841 RMSE: 0.338200730720901 NRMSE: 0.17446696933726474 MAPE: 172.87237275983907 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.40162383115089545 Spearman Correlation: 0.3862197220614044 Coefficient of Determination: 0.16106262501463042 RMSE: 0.18860029586078106 NRMSE: 0.13441302782386721 MAPE: 378.1537845626586 Pearson Correlation: 0.20990469369845347 Spearman Correlation: 0.16926121113548007 Coefficient of Determination: -0.06864543438998805 RMSE: 0.21480995615360537 NRMSE: 0.19119030577781418 MAPE: 618.8474203264233 Predictor: ElasticNet Pearson Correlation: 0.2967195523686797 Spearman Correlation: 0.31940040179779977 Coefficient of Determination: 0.055470703732111826 RMSE: 0.20011761334104144 NRMSE: 0.14262127324503715 MAPE: 140.32924088677132 Pearson Correlation: 0.24677542017830048 Spearman Correlation: 0.20281830738292306 Coefficient of Determination: -0.049817157550336555 RMSE: 0.21290919715539997 NRMSE: 0.18949854669651275 MAPE: 219.2407458187418 Predictor: RandomForests Pearson Correlation: 0.33302890450616124 Spearman Correlation: 0.3378769699810783 Coefficient of Determination: 0.10454953363537889 RMSE: 0.1948490899615274 NRMSE: 0.13886646376094144 MAPE: 219.9639349028977 Pearson Correlation: 0.2371807284359152 Spearman Correlation: 0.17721400745014462 Coefficient of Determination: -0.03196862961188662 RMSE: 0.2110915442050975 NRMSE: 0.18788075565186593 MAPE: 337.3705822341323 Protein: PTEN Protein Interaction Partners Count: 884 x_train_column_count: 875 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ABTB1', 'ACTB', 'ACTG1', 'ADM', 'AEBP1', 'AFP', 'AKT1S1', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'AMHR2', 'ANXA2', 'ANXA5', 'APAF1', 'APC', 'ARAF', 'AREG', 'ARHGAP21', 'ARID1A', 'ARID2', 'ARL2BP', 'AR', 'ATF3', 'ATG12', 'ATG5', 'ATG7', 'ATM', 'ATRX', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'AXL', 'BAD', 'BAG5', 'BARD1', 'BAX', 'BBC3', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BIRC3', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BNIP3', 'BRAF', 'BRCA1', 'BRCA2', 'BRD4', 'BTG2', 'BTK', 'SPRTN', 'CLHC1', 'CA9', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBL', 'CBX7', 'CCL2', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD24', 'CD274', 'CD34', 'CD44', 'CD79A', 'CD79B', 'CDC14A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC7', 'CDH17', 'CDH1', 'CDH2', 'CDIPT', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CENPC', 'CFL1', 'CFLAR', 'CFTR', 'CHD1', 'CHD8', 'CHEK1', 'CHEK2', 'CHKA', 'CHORDC1', 'CHUK', 'CLTCL1', 'CLTC', 'CNOT6L', 'CREB1', 'CREBBP', 'CRP', 'CSF1R', 'CSF1', 'CSK', 'CSN2', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTGF', 'CTLA4', 'CTNNB1', 'CUL1', 'CUL3', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'DAPK1', 'DAXX', 'DBN1', 'DCAF13', 'DDIT4', 'DDR2', 'DECR1', 'DEPTOR', 'DGCR8', 'DICER1', 'DLC1', 'DLG1', 'DLG4', 'DNM1L', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOLPP1', 'DUSP1', 'DUSP6', 'DUT', 'DVL1', 'DYRK1A', 'E2F1', 'E2F2', 'E2F3', 'ECSCR', 'EGFR', 'EGF', 'EGR1', 'EIF2AK2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4EBP2', 'EIF4E', 'EIF4G1', 'EML4', 'ENDOG', 'EP300', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA3', 'EPHA4', 'EPHA5', 'EPHA7', 'EPHB1', 'EPHB2', 'EPHB3', 'EPHB4', 'ERBB2', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ESR1', 'ETS1', 'ETS2', 'ETV1', 'ETV6', 'EYA2', 'EZH2', 'EZR', 'FABP4', 'FASLG', 'FASN', 'FBXW7', 'FCGR1B', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FIG4', 'FKBP1A', 'FLCN', 'FLT1', 'FLT3', 'FLT4', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXG1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FOXP3', 'FRK', 'FYN', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GCK', 'GDF10', 'GDF2', 'GFAP', 'GJA1', 'GLI1', 'GNA11', 'GNAQ', 'GNAS', 'GNRHR', 'GRASP', 'GRB2', 'GRPR', 'GSK3A', 'GSK3B', 'GSTP1', 'H1F0', 'H2AFX', 'HAVCR2', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HES1', 'HGF', 'HIF1A', 'HIST1H2BA', 'HK1', 'HK2', 'HMGA2', 'HNF4A', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA1A', 'HSPA1B', 'HSPA2', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'ID1', 'ID4', 'IDH1', 'IDH2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL17A', 'IL21', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INPP4A', 'INPP4B', 'INPP5A', 'INPP5B', 'INPP5D', 'INPP5E', 'INPP5F', 'INPP5J', 'INPP5K', 'INPPL1', 'INSRR', 'INSR', 'INS', 'IPMK', 'IPO11', 'IQGAP1', 'IRAK1', 'IRS1', 'IRS2', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'ITPR3', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUN', 'KAT2B', 'KDM5B', 'KDM5C', 'KDM6A', 'KDR', 'KEAP1', 'ATG13', 'KIF11', 'KLLN', 'KITLG', 'KIT', 'KLF17', 'KLF2', 'KLF4', 'KLK3', 'KPNA1', 'KPNA2', 'KPNA5', 'KPNA6', 'KPNA7', 'KRAS', 'KRT14', 'KRT5', 'KRT8', 'LASP1', 'LATS1', 'LATS2', 'LCK', 'LDHA', 'LEF1', 'LEP', 'LGALS3', 'LIG4', 'LOX', 'LRIG1', 'LRP1B', 'LRRK2', 'LYN', 'LYPD1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAN2C1', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K3', 'MAP2K4', 'MAP2K7', 'MAP3K1', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK4', 'MAPK6', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAP1', 'MAPT', 'MARCH2', 'MARCH3', 'MAST1', 'MAST2', 'MAST3', 'MAST4', 'MATK', 'MCL1', 'MCM2', 'MCM7', 'MCRS1', 'MDK', 'MDM2', 'MDM4', 'MECOM', 'MECP2', 'MED12', 'MEN1', 'MET', 'MGMT', 'MINPP1', 'MITF', 'MKI67', 'MKRN1', 'MLH1', 'MLH3', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT1', 'MLST8', 'MME', 'MMP2', 'MMP9', 'MOV10', 'MRAP', 'MRE11A', 'MSH2', 'MSH6', 'MTDH', 'MTMR2', 'MTOR', 'MTSS1', 'MUTYH', 'MVP', 'MYCN', 'MYC', 'MYLK', 'MYOCD', 'NANOG', 'NCKAP1', 'NCOA3', 'NCOR2', 'NDFIP1', 'NDFIP2', 'NDRG1', 'NDRG2', 'NEDD4L', 'NEDD4', 'NES', 'NF1', 'NF2', 'NFATC1', 'NFATC4', 'NFE2L2', 'NFKBIA', 'NGFR', 'NLGN3', 'NLGN4X', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR1H4', 'NR3C2', 'NRAS', 'NRP2', 'NTRK1', 'NTRK2', 'NUMB', 'OCRL', 'OLIG2', 'OTUD3', 'PALB2', 'PARD3', 'PARD6A', 'PARD6B', 'PARD6G', 'PARK2', 'PARK7', 'PARP1', 'PAX8', 'PBK', 'PBRM1', 'PCGF2', 'PCSK9', 'PDCD1', 'PDCD4', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PDK1', 'PDK2', 'PDPK1', 'PDZK1', 'PECAM1', 'PGM3', 'PGR', 'PHF6', 'PHLPP1', 'PHLPP2', 'PI3', 'PI4K2A', 'PI4K2B', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIK3R5', 'PIKFYVE', 'PINK1', 'PIP4K2A', 'PIP4K2B', 'PIP4K2C', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PIP5KL1', 'PKM', 'PLCB1', 'PLCB2', 'PLCB3', 'PLCB4', 'PLCD1', 'PLCD3', 'PLCD4', 'PLCE1', 'PLCG1', 'PLCG2', 'PLCH1', 'PLCH2', 'PLCZ1', 'PLEKHA1', 'PLEK', 'PLK1', 'PLK2', 'PLK3', 'BPIFA1', 'PMAIP1', 'PML', 'PMPCA', 'PMS1', 'PMS2', 'POLE', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPM1D', 'PPP2R1A', 'PPP2R4', 'PPP2R5A', 'PPP2R5E', 'PPP3CA', 'PPP6C', 'PRDX1', 'PREX2', 'PRKAA1', 'PRKAA2', 'PRKCI', 'PRKCZ', 'PRKDC', 'PRMT5', 'PROM1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTER', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPMT1', 'PTPN11', 'PTPN12', 'PTPN13', 'PTPN1', 'PTPRC', 'PTPRD', 'PTS', 'PXN', 'RAB7A', 'RAC1', 'RAC2', 'RAD51C', 'RAD51D', 'RAD51', 'RAD52', 'RAF1', 'RASA1', 'RASSF1', 'RB1CC1', 'RB1', 'RBL1', 'RBL2', 'RBM38', 'RBFOX2', 'RCN1', 'RECK', 'RELA', 'REL', 'REM1', 'RETN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'DROSHA', 'RNF146', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KB1', 'RPS6KB2', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'RRM1', 'RSL1D1', 'RUNX3', 'RWDD3', 'SACM1L', 'SALL4', 'SCAI', 'SCGB1D4', 'SCRIB', 'SDHB', 'SDHC', 'SERPINA1', 'SERPINA4', 'SERPINB5', 'SESN1', 'SESN2', 'SETD2', 'SGK1', 'SGK2', 'SGK3', 'SHANK2', 'SHARPIN', 'SHC1', 'SHFM1', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT5', 'SIRT6', 'SIRT7', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC2A4', 'SLC34A2', 'SLC9A3R1', 'SLC9A3R2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNCA', 'SNX27', 'SOCS1', 'SOCS3', 'SOD2', 'SOS1', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPOP', 'SPRY1', 'SPRY2', 'SRBD1', 'SRC', 'SREBF1', 'SRF', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STMN1', 'STUB1', 'STX16', 'SUCLG2', 'SUMO1', 'SYK', 'SYNJ1', 'SYNJ2', 'TACSTD2', 'TBX1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TEP1', 'TERT', 'TET1', 'TGFB1', 'TGFBR1', 'TGFBR2', 'TGM2', 'THBS1', 'TIMP1', 'TIMP3', 'TJP1', 'TLR4', 'TMEM55A', 'TMEM55B', 'TMPRSS2', 'TNFRSF10B', 'TNFSF10', 'TNF', 'TNKS2', 'TNKS', 'TNPO2', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TPM1', 'TRAF6', 'TRIM27', 'TRIM29', 'TSC1', 'TSC2', 'TTN', 'TUT1', 'TWIST1', 'TWSG1', 'TXN', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2E1', 'UBE2I', 'UBE2L3', 'UBE3A', 'ULK1', 'ULK2', 'USP10', 'USP13', 'USP18', 'USP28', 'USP7', 'USP8', 'UTF1', 'UVRAG', 'VCL', 'VDR', 'VEGFA', 'VHL', 'WDR18', 'WDTC1', 'WEE1', 'WIPI1', 'WIPI2', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT9A', 'WNT9B', 'WT1', 'WWP1', 'WWP2', 'XIAP', 'XPO1', 'XPO5', 'YAP1', 'YES1', 'YWHAB', 'YWHAZ', 'YY1', 'ZEB1', 'ZEB2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 0.6958797782705887 Spearman Correlation: 0.6436917214816044 Coefficient of Determination: 0.4841375874092222 RMSE: 0.4034913367150698 NRMSE: 0.07805078472513731 MAPE: 496.0628323655938 Pearson Correlation: -0.08722813115743087 Spearman Correlation: 0.06881631940547889 Coefficient of Determination: -4.683855348434462e+19 RMSE: 5102593376.811086 NRMSE: 797841197.2185264 MAPE: 330616316429.2598 Predictor: ElasticNet Pearson Correlation: 0.5000446406276393 Spearman Correlation: 0.4751938561857952 Coefficient of Determination: 0.2035747680832225 RMSE: 0.5013485663467415 NRMSE: 0.09698014669350463 MAPE: 224.32606973717148 Pearson Correlation: 0.15781965523609875 Spearman Correlation: 0.16226386862679085 Coefficient of Determination: 0.013865090259408741 RMSE: 0.7403846233149501 NRMSE: 0.11576649571025723 MAPE: 705.6797700207825 Predictor: RandomForests Pearson Correlation: 0.4821413007728855 Spearman Correlation: 0.4153546509397109 Coefficient of Determination: 0.13129408683297594 RMSE: 0.523604850310263 NRMSE: 0.10128537030142817 MAPE: 284.0523170034129 Pearson Correlation: 0.11666981666042087 Spearman Correlation: 0.211988209300549 Coefficient of Determination: 0.013101766942274384 RMSE: 0.7406711173424958 NRMSE: 0.11581129189938172 MAPE: 478.677697399663 Protein: BRCA2 Protein Interaction Partners Count: 361 x_train_column_count: 351 x_train columns: ['ABL1', 'ACHE', 'ADRB1', 'ADRB2', 'AKT1', 'ALK', 'APEX1', 'ARID1A', 'ARPC1A', 'AR', 'ATAD5', 'ATM', 'ATRIP', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'B3GALTL', 'BACH1', 'BARD1', 'BCCIP', 'BCHE', 'BDNF', 'BECN1', 'BIRC5', 'BLM', 'BMI1', 'BRCA1', 'BRCC3', 'BRE', 'BRIP1', 'SLX4', 'BUB1B', 'BUB1', 'BUB3', 'SFR1', 'RHNO1', 'RMI2', 'BABAM1', 'MMS22L', 'CASC1', 'CASC5', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCNE1', 'CDC25A', 'CDC25C', 'CDC45', 'CDC6', 'CDH1', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CENPE', 'CENPF', 'CEP55', 'CHEK1', 'CHEK2', 'CHRNA1', 'CLSPN', 'CNTROB', 'CREM', 'CSMD3', 'CTNNB1', 'CYP19A1', 'DMC1', 'DNA2', 'DSN1', 'DYNC1LI2', 'EGFR', 'EGF', 'ELAC2', 'EME1', 'EME2', 'ENAM', 'EPCAM', 'ERBB2', 'ERBB3', 'ERCC1', 'ERCC2', 'ERCC4', 'ERCC5', 'ERCC6', 'ERCC8', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM175A', 'FANCA', 'FANCB', 'FANCC', 'FANCD2', 'FANCE', 'FANCF', 'FANCG', 'FANCI', 'FANCL', 'FANCM', 'FBN1', 'FBXO18', 'FBXW7', 'FEN1', 'FGFR2', 'FHIT', 'FLNA', 'FOXM1', 'GAPDH', 'GEN1', 'SLX1B', 'H2AFX', 'HELQ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HMG20A', 'HMG20B', 'HMMR', 'HNRNPC', 'HOXB13', 'HRAS', 'HUS1', 'ITPKB', 'KAT2B', 'KAT5', 'KEAP1', 'SPIDR', 'KIF23', 'KIF4A', 'KIT', 'KLK3', 'KRAS', 'KRT5', 'LIG1', 'LIG3', 'LIG4', 'LIMD1', 'LSP1', 'MAD2L2', 'MAGED1', 'MAMSTR', 'MAP2K2', 'MAP3K1', 'MCM10', 'MCPH1', 'MDC1', 'MDM2', 'MDM4', 'MEN1', 'MGMT', 'MKI67', 'MLH1', 'MLH3', 'KMT2C', 'MND1', 'MORF4L1', 'MRE11A', 'MRPL36', 'MSH2', 'MSH3', 'MSH4', 'MSH5', 'MSH6', 'MTA2', 'FAN1', 'MUC1', 'MUS81', 'MUTYH', 'MYC', 'NBN', 'NCAPG', 'NEDD4', 'NF1', 'NHEJ1', 'NNT', 'NOTCH1', 'NSL1', 'NSMCE4A', 'OBFC1', 'OGG1', 'PALB2', 'PARG', 'PARP1', 'PARP2', 'PARP3', 'PAXIP1', 'PCNA', 'PDLIM7', 'PDS5A', 'PDS5B', 'PGR', 'PIK3CA', 'PLCB4', 'PLEC', 'PLEKHH1', 'PLK1', 'PMS1', 'PMS2', 'PNOC', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'POLN', 'POLQ', 'PRDM9', 'PRKDC', 'PRSS1', 'PSMC3IP', 'PSMD3', 'PSMD6', 'PTEN', 'RAD17', 'RAD18', 'RAD1', 'RAD21', 'RAD23B', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD52', 'RAD54B', 'RAD54L', 'RAD9A', 'RAD9B', 'RAG2', 'RASSF1', 'RBBP8', 'RBMX', 'RECQL4', 'RECQL5', 'RECQL', 'RET', 'REV1', 'REV3L', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RNF168', 'RNF8', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SKP2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCAL1', 'SMARCB1', 'SMC1A', 'SMC2', 'SMC3', 'SMC4', 'SMC5', 'SMC6', 'SMUG1', 'SNAI2', 'SP1', 'SPO11', 'STAT5A', 'STK11', 'STRA13', 'SUV39H1', 'SYCP3', 'TBCE', 'TDP1', 'TERT', 'TEX15', 'TMPRSS2', 'TNS1', 'TOP1', 'TOP2A', 'TOP3A', 'TOP3B', 'TOPBP1', 'TOX3', 'TP53BP1', 'TP53', 'TPX2', 'TRIP12', 'PRSS58', 'TTK', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2D1', 'UBE2E2', 'UBE2E3', 'UBE2N', 'UBE2T', 'UIMC1', 'USF1', 'USP11', 'USP15', 'USP1', 'USP21', 'USP4', 'UVRAG', 'VEGFA', 'VWF', 'WDR48', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WTIP', 'XPA', 'XPO1', 'XRCC1', 'XRCC2', 'XRCC3', 'XRCC4', 'XRCC5', 'XRCC6', 'ZFYVE26', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.24379476995206853 Spearman Correlation: 0.2638070907586737 Coefficient of Determination: -4.272038547595456 RMSE: 0.44038417438996025 NRMSE: 0.28370698946043504 MAPE: 1130.553548701386 Pearson Correlation: -0.043307250065754185 Spearman Correlation: 0.09979814199439786 Coefficient of Determination: -1.2878918903102543e+24 RMSE: 236171342918.5512 NRMSE: 229446272666.69052 MAPE: 119585107937985.34 Predictor: ElasticNet Pearson Correlation: 0.2567883717156003 Spearman Correlation: 0.2508962923101712 Coefficient of Determination: 0.046869669414013604 RMSE: 0.18724859178855793 NRMSE: 0.12063043439430372 MAPE: 129.48838670657085 Pearson Correlation: 0.1354474226076742 Spearman Correlation: 0.1285402914403628 Coefficient of Determination: 0.017811330368851852 RMSE: 0.2062457247063279 NRMSE: 0.20037279799703483 MAPE: 208.1119435209004 Predictor: RandomForests Pearson Correlation: 0.3465164359592406 Spearman Correlation: 0.3191979394267758 Coefficient of Determination: 0.09506143282028778 RMSE: 0.1824534013829151 NRMSE: 0.11754124746845876 MAPE: 149.6391456968571 Pearson Correlation: 0.15773734983581247 Spearman Correlation: 0.1661323370847607 Coefficient of Determination: 0.024250059800084767 RMSE: 0.20556859210438275 NRMSE: 0.1997149470075903 MAPE: 227.89396630660747 Protein: CDKN2A Protein Interaction Partners Count: 612 x_train_column_count: 604 x_train columns: ['ABCC1', 'ABL1', 'ACAP1', 'ACAP2', 'ACP5', 'ACTA1', 'ACTB', 'ACTG1', 'ADAMTS9', 'ADAP1', 'AFP', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD12', 'ANXA5', 'AP3D1', 'AP3S1', 'AP3S2', 'APAF1', 'APBA1', 'APBA2', 'ARAP1', 'ARAP2', 'ARF1', 'ARF3', 'ARF4', 'ARF5', 'ARF6', 'ARFGAP1', 'ARFGAP3', 'ARFIP2', 'ARFRP1', 'ARID1A', 'ARID2', 'ARID5B', 'ARL10', 'ARL1', 'ARL2', 'ARL3', 'ARL4A', 'ARL5A', 'AR', 'ASAP1', 'ATM', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'AXIN1', 'BAP1', 'BCL2L11', 'BCL2L1', 'BCL6', 'BECN1', 'BIRC5', 'BMI1', 'BRAF', 'BRCA1', 'BRCA2', 'BUB1B', 'RGCC', 'C1QBP', 'RABL6', 'CACNA1G', 'CADM1', 'CAMK1D', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNL1', 'CD274', 'CD34', 'CD44', 'CDC123', 'CDC20', 'CDC25A', 'CDC25C', 'CDC42', 'CDC45', 'CDC5L', 'CDC6', 'CDC7', 'CDH13', 'CDH17', 'CDH1', 'CDH2', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5RAP3', 'CDK6', 'CDK7', 'CDKAL1', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDX2', 'CEACAM5', 'CEBPB', 'CEBPE', 'CHEK1', 'CHEK2', 'CHFR', 'CHKA', 'COMMD1', 'CRABP1', 'CREBBP', 'CSF1R', 'CSF1', 'CSF2', 'CTBP1', 'CTBP2', 'CTCF', 'CTLA4', 'CTNNB1', 'CTSK', 'CUL1', 'CUL3', 'CXCR4', 'CYCS', 'CYLD', 'CYTH1', 'CYTH2', 'CYTH3', 'DAB2IP', 'DAP', 'DAXX', 'DICER1', 'DIRAS3', 'DLEC1', 'DMTF1', 'DNAH3', 'DNMT1', 'DNMT3A', 'DNMT3B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EBF1', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EP300', 'EPCAM', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ETS1', 'ETV6', 'EWSR1', 'EZH1', 'EZH2', 'FAT1', 'FBXW7', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FKBP2', 'FLT3', 'FMN2', 'FN1', 'FOS', 'FOXA1', 'FOXM1', 'FOXN2', 'FOXO1', 'FOXO3', 'FTO', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GATA4', 'GATA5', 'GBF1', 'GDF15', 'GGA1', 'GGA2', 'GGA3', 'GIT1', 'GIT2', 'GLI1', 'GLTSCR2', 'GMNN', 'GNA11', 'GNAQ', 'GNAS', 'GNL3', 'GOLPH3', 'GP5', 'GSPT1', 'GSTP1', 'H2AFX', 'H2AFZ', 'H3F3A', 'H3F3B', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC9', 'HELLS', 'HGF', 'HHEX', 'HIC1', 'HIF1A', 'HIST1H2BA', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AA3', 'HIST2H2AC', 'HIST2H4A', 'HIST4H4', 'HLTF', 'HMGA2', 'HNF4A', 'HNRNPD', 'HOPX', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA4', 'HSPA9', 'HUWE1', 'ID1', 'IDH1', 'IDH2', 'IGF1R', 'IGF1', 'IGF2BP2', 'IGF2R', 'IGF2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING4', 'INS', 'IQSEC1', 'IRS1', 'ISOC2', 'ITGAM', 'JAK1', 'JAK2', 'JAK3', 'JAZF1', 'JUNB', 'JUN', 'KAT2B', 'KAT5', 'KCNJ11', 'KCNQ1', 'KDM1A', 'KDM2B', 'KDM6A', 'KDM6B', 'KDR', 'KEAP1', 'KIAA1549', 'KIT', 'KLF4', 'KRAS', 'KRT19', 'KRT20', 'KRT5', 'KRT7', 'LATS2', 'LOX', 'LRRK2', 'MACROD2', 'MAF', 'MAP2K1', 'MAP2K4', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MAX', 'MC1R', 'MCL1', 'MCM10', 'MCM2', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEN1', 'MEOX1', 'MEOX2', 'MET', 'MGMT', 'MITF', 'MKRN1', 'MLANA', 'MLH1', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT3', 'MME', 'MMP2', 'MMP7', 'MMP9', 'MOV10', 'MRAS', 'MSH2', 'MSH6', 'MTA1', 'MTAP', 'MTHFR', 'MTNR1B', 'MTOR', 'MUC1', 'MYBL2', 'MYCL', 'MYCN', 'MYC', 'MYOD1', 'KAT6A', 'NANOG', 'NCAM1', 'NCL', 'NCOR1', 'NES', 'NEUROG1', 'NF1', 'NF2', 'NFATC1', 'NFE2L2', 'NME1', 'NOTCH1', 'NOTCH2', 'NPM1', 'NRAS', 'NSUN2', 'ORC4', 'ORC5', 'OSBP2', 'P2RY8', 'PA2G4', 'PALB2', 'PARP1', 'PAX3', 'PAX5', 'PAX8', 'PBRM1', 'PCGF2', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PEX19', 'PGR', 'PHLDB1', 'PI3', 'PIAS2', 'PIGF', 'PIK3CA', 'PIK3R1', 'PIP4K2A', 'PLEKHA3', 'PLEKHA8', 'PLEK', 'PLK1', 'PMAIP1', 'PML', 'PMS2', 'POTEF', 'POU5F1', 'PPARA', 'PPARG', 'PPM1D', 'PPP1R9B', 'PPP3CA', 'PRDM2', 'PRMT6', 'PROM1', 'PRSS1', 'PSMC3', 'PSMD10', 'PSME3', 'PTCH1', 'PTEN', 'PTER', 'PTF1A', 'PTGS2', 'PTPN11', 'PTPRC', 'PTPRD', 'PXN', 'RAB11A', 'RAB5A', 'RABEP1', 'RABGEF1', 'RAC2', 'RAD51', 'RAF1', 'RAP2B', 'RARB', 'RASSF1', 'RASSF2', 'RB1', 'RBL1', 'RBL2', 'RCC1', 'RELA', 'RELB', 'REL', 'RET', 'RHOA', 'DROSHA', 'RNF2', 'RNF43', 'ROS1', 'RPL11', 'RPRM', 'RPS27A', 'RPS6KB1', 'RRAS2', 'RRAS', 'RTEL1', 'RUNX2', 'RUNX3', 'SDHC', 'SENP1', 'SENP3', 'SERPINE1', 'SERTAD1', 'SETD2', 'SFN', 'SFRP1', 'SFRP2', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SIX2', 'SKP2', 'SLC30A8', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SNAI1', 'SNAI2', 'SNCA', 'SOCS1', 'SOX2', 'SP1', 'SPEN', 'SRC', 'STAT1', 'STAT3', 'STK11', 'STK25', 'STK33', 'STMN1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUV39H1', 'SUZ12', 'SYNE1', 'SYP', 'TBL1XR1', 'TBRG1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TERT', 'TET2', 'TFDP1', 'TFPI2', 'TGFBR2', 'THADA', 'THBS1', 'TIMP3', 'TMCO1', 'TMEM115', 'TNFRSF10B', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TRADD', 'TRIM28', 'TRIP12', 'PRSS58', 'TSC2', 'TSPAN8', 'TTF1', 'TWIST1', 'TWSG1', 'TYR', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2I', 'UBE3A', 'UCHL1', 'USP7', 'UTF1', 'VEGFA', 'VHL', 'WDTC1', 'WEE1', 'WFS1', 'WHSC1', 'WIF1', 'WRN', 'WT1', 'WWOX', 'XRCC1', 'YY1', 'ZBTB17', 'ZBTB7A', 'ZEB1', 'ZFP91', 'ZNF148', 'ZNF217', 'ZNF227', 'ZNF410', 'ZNF420', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.6509993545366299 Spearman Correlation: 0.5712800939643662 Coefficient of Determination: -4.7696929067415885 RMSE: 1.6188524268740752 NRMSE: 0.36596641276683056 MAPE: 1858.4493429589095 Pearson Correlation: -0.23972274762260662 Spearman Correlation: 0.09103628938742891 Coefficient of Determination: -3.016218925711359e+24 RMSE: 1095310640080.926 NRMSE: 330012244676.3863 MAPE: 77193527878742.03 Predictor: ElasticNet Pearson Correlation: 0.5138941269812501 Spearman Correlation: 0.4219396408272331 Coefficient of Determination: 0.23928786670510727 RMSE: 0.5878155668733526 NRMSE: 0.13288472179797728 MAPE: 181.2566260878997 Pearson Correlation: 0.4660993702768803 Spearman Correlation: 0.34385509028205424 Coefficient of Determination: 0.1988394959274331 RMSE: 0.5645022038172837 NRMSE: 0.17008201380454466 MAPE: 170.02594114897636 Predictor: RandomForests Pearson Correlation: 0.504798182828652 Spearman Correlation: 0.3817903539800669 Coefficient of Determination: 0.2046573259019704 RMSE: 0.6010464744528851 NRMSE: 0.1358757713242647 MAPE: 197.7359633258174 Pearson Correlation: 0.46237068038783047 Spearman Correlation: 0.3686243552780115 Coefficient of Determination: 0.1652105748226076 RMSE: 0.5762279840962697 NRMSE: 0.17361493946859588 MAPE: 137.6253675618226 Protein: TP53 Protein Interaction Partners Count: 1000 x_train_column_count: 990 x_train columns: ['ABCB1', 'ABCC1', 'ABL1', 'ACTB', 'ACTL6A', 'ADAM17', 'AFP', 'AGT', 'AICDA', 'AIFM2', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD2', 'ANXA1', 'ANXA2', 'ANXA5', 'APAF1', 'APBB1', 'APC', 'APEX1', 'APOBEC3B', 'APP', 'ARID1A', 'ARID3A', 'AR', 'ASF1A', 'ASXL1', 'ATF2', 'ATF3', 'ATG7', 'ATM', 'ATN1', 'ATRIP', 'ATRX', 'ATR', 'ATXN3', 'AURKA', 'AURKB', 'AXIN1', 'AXL', 'BACE1', 'BAG1', 'BAG2', 'BAIAP2L1', 'BAK1', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2A1', 'BCL2L11', 'BCL2L12', 'BCL2L14', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BID', 'BIRC3', 'BIRC5', 'BIRC6', 'BLM', 'BMF', 'BMI1', 'BMX', 'BNIP3L', 'BNIP3', 'BRCA1', 'BRCA2', 'BRCC3', 'BRD1', 'BRD4', 'BRD7', 'BRE', 'BRIP1', 'BRPF1', 'BRPF3', 'BTG2', 'BTK', 'BUB1B', 'BUB1', 'RHNO1', 'RGCC', 'RMI2', 'CNOT11', 'SETD9', 'CA9', 'CABIN1', 'CABLES1', 'CAPN1', 'CARM1', 'CASP10', 'CASP1', 'CASP2', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBX2', 'CBX4', 'CBX6', 'CBX8', 'CCDC106', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNG2', 'CCNH', 'CCNK', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CD24', 'CD274', 'CD34', 'CD40LG', 'CD40', 'CD44', 'CD82', 'CDC20', 'CDC25A', 'CDC25C', 'CDH17', 'CDH1', 'CDK12', 'CDK13', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CEACAM5', 'CEBPB', 'CENPJ', 'CFL1', 'CFLAR', 'CHD3', 'CHD4', 'CHD8', 'CHEK1', 'CHEK2', 'CHUK', 'CISH', 'CITED2', 'CLSPN', 'CLU', 'CNOT10', 'CNOT1', 'CNOT2', 'CNOT3', 'CNOT4', 'CNOT6L', 'CNOT6', 'CNOT7', 'CNOT8', 'COPS5', 'CREB1', 'CREBBP', 'CRYAB', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK1G1', 'CSNK1G2', 'CSNK1G3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTCF', 'CTGF', 'CTNNB1', 'CUL4A', 'CUL7', 'CUL9', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP1A1', 'DACH1', 'DAPK1', 'DAP', 'DAXX', 'DDB1', 'DDB2', 'DDIT4', 'DDX17', 'DDX3X', 'DDX5', 'DECR1', 'DGCR8', 'DHCR24', 'DHFR', 'DIABLO', 'DICER1', 'DKK1', 'DMTF1', 'DNA2', 'DNAJA3', 'DNAJB1', 'DNMT1', 'DNMT3A', 'DNTT', 'DPYD', 'DRAM1', 'DTL', 'DUSP1', 'DUSP2', 'DYRK1A', 'DYRK2', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EEF1A1', 'EEF1A2', 'EGFR', 'EGF', 'EGR1', 'EHMT1', 'EHMT2', 'EI24', 'EIF2AK2', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4EBP1', 'ELANE', 'ELAVL1', 'ELL3', 'ELL', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHA3', 'EPHB2', 'ERBB2', 'ERBB4', 'ERCC1', 'ERCC2', 'ERCC3', 'ERCC6', 'ESR1', 'ETS1', 'ETS2', 'EWSR1', 'EXO1', 'EZH2', 'F2', 'FADD', 'AMER1', 'FAM175B', 'FANCC', 'FANCD2', 'FASLG', 'FAS', 'FBL', 'FBXO11', 'FBXO4', 'FBXW7', 'FGF1', 'FGF2', 'FGFR3', 'FHIT', 'FHL2', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FSCN1', 'FUT4', 'FZR1', 'G3BP1', 'G6PD', 'GADD45A', 'GADD45B', 'GADD45G', 'GAPDH', 'GATAD2A', 'GATAD2B', 'GDF15', 'GFI1', 'GLS2', 'GLTSCR2', 'GNL3', 'GRAMD4', 'GRB10', 'GRB14', 'GSK3B', 'GSTP1', 'GTF2H1', 'GTSE1', 'H1F0', 'H2AFX', 'HAMP', 'HCK', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC5', 'HDAC7', 'HDAC8', 'HDAC9', 'HERC5', 'HIC1', 'HIF1A', 'HIPK1', 'HIPK2', 'HIPK3', 'HIPK4', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HK2', 'HMGA1', 'HMGA2', 'HMGB1', 'HMGB2', 'HMMR', 'HMOX1', 'HNF4A', 'HNRNPK', 'HNRNPL', 'HOXA5', 'HPGDS', 'HRAS', 'HSF1', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA1A', 'HSPA1B', 'HSPA1L', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'HSPB1', 'HSPB2', 'HTT', 'HUS1', 'HUWE1', 'ICAM1', 'ID2', 'ID4', 'IDH1', 'IDH2', 'IFI16', 'IFNAR1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IGFBP7', 'IKBKB', 'IL17A', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING2', 'ING3', 'ING4', 'ING5', 'INSIG1', 'INS', 'IRF1', 'ISG15', 'ITPKB', 'JAG1', 'JAK2', 'JMY', 'JUN', 'KAT2A', 'KAT2B', 'KAT5', 'KDM1A', 'KDM6A', 'KDM6B', 'KDR', 'KHDRBS1', 'CCAR2', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KPNA2', 'KRAS', 'KRT14', 'KRT17', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'L3MBTL1', 'LAMA4', 'LEP', 'LGALS7B', 'LGALS7', 'LIF', 'LIG4', 'LIN28A', 'PIDD1', 'LRRK2', 'LYN', 'MAF1', 'MAF', 'MAGEA2', 'MAP1LC3B', 'MAP2K1', 'MAP2K3', 'MAP2K7', 'MAP3K1', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MBD3', 'MCL1', 'MCM7', 'MDC1', 'MDH1', 'MDM2', 'MDM4', 'MEAF6', 'MECOM', 'MELK', 'MET', 'MGMT', 'MIF', 'MKI67', 'MKRN1', 'MLH1', 'KMT2D', 'KMT2C', 'MMP13', 'MMP1', 'MMP2', 'MMP9', 'MOV10', 'MRE11A', 'MSH2', 'MSH6', 'MSX1', 'MT1A', 'MT2A', 'MTA1', 'MTA2', 'MTA3', 'MTOR', 'MUC1', 'MUTYH', 'MYBBP1A', 'MYB', 'MYCN', 'MYC', 'MYOCD', 'KAT8', 'KAT6A', 'NANOG', 'NBN', 'NCL', 'NCOA3', 'NCOR1', 'NCOR2', 'NDN', 'NDRG1', 'NEDD8', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFE2L2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NFKBIB', 'NFYA', 'NFYB', 'NFYC', 'NGFR', 'NLK', 'NLRC4', 'NME1', 'NOC2L', 'NOS3', 'NOTCH1', 'NOTCH3', 'NOTCH4', 'NOX4', 'NPM1', 'NQO1', 'NR1I2', 'NR2E1', 'NR3C1', 'NR4A1', 'NR4A2', 'NRAS', 'NUAK1', 'NUMB', 'NUPR1', 'OGG1', 'OLIG2', 'OPN1SW', 'OSGIN1', 'OTUB1', 'OTUB2', 'OTUD5', 'PADI4', 'PALB2', 'PARK2', 'PARK7', 'PARP1', 'PATZ1', 'PAX2', 'PAX3', 'PAX8', 'PBK', 'PBRM1', 'PCBP4', 'PCNA', 'PDCD4', 'PDCD5', 'PDGFRA', 'PDGFRB', 'PDLIM7', 'PER2', 'PERP', 'PGR', 'PHB', 'PHC1', 'PHC2', 'PHC3', 'PHF20', 'PHGDH', 'PI3', 'PIAS1', 'PIAS2', 'PIAS4', 'PIK3CA', 'PIN1', 'PKM', 'PLAGL1', 'PLAU', 'PLK1', 'PLK2', 'PLK3', 'PLK4', 'PMAIP1', 'PML', 'PMS2', 'POLI', 'POLK', 'POU4F1', 'POU4F2', 'POU5F1', 'PPARGC1A', 'PPARG', 'PPIF', 'PPM1D', 'PPP1R13B', 'PPP1R13L', 'PPP1R15A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R4', 'PPP2R5C', 'PRDM1', 'PRDM2', 'PRDX1', 'PRELID1', 'PRIMA1', 'PRKAA1', 'PRKAA2', 'PRKAB1', 'PRKAB2', 'PRKAG1', 'PRKAG2', 'PRKAG3', 'PRKCA', 'PRKCD', 'PRKCZ', 'PRKD1', 'PRKDC', 'PRKG1', 'PRMT1', 'PRMT5', 'PROM1', 'PSEN1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTBP1', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2', 'PTTG1', 'RABGGTA', 'RABGGTB', 'RAD17', 'RAD1', 'RAD50', 'RAD51', 'RAD9A', 'RAD9B', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP4', 'RBBP6', 'RBBP7', 'RBBP8', 'RBL1', 'RBL2', 'RBM38', 'RBPJ', 'RCHY1', 'RCOR1', 'RECQL4', 'RELA', 'REM1', 'REST', 'RET', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RFFL', 'RFWD2', 'RING1', 'RMI1', 'DROSHA', 'RNF20', 'RNF2', 'RNF34', 'RNF43', 'ROCK1', 'RPA1', 'RPA2', 'RPA3', 'RPL11', 'RPL22', 'RPL26', 'RPL5', 'RPRM', 'RPS14', 'RPS19', 'RPS27A', 'RPS27L', 'RPS3', 'RPS6KB1', 'RQCD1', 'RRAD', 'RRM2B', 'RRM2', 'RUNX2', 'RUNX3', 'S100A2', 'S100A4', 'S100A6', 'S100B', 'SALL4', 'SCO2', 'SDHC', 'SENP1', 'SENP3', 'SERPINB5', 'SERPINE1', 'SESN1', 'SESN2', 'SESN3', 'SETD2', 'SETD7', 'SETD8', 'SETDB1', 'SFN', 'SRSF1', 'SGK1', 'SHFM1', 'SHH', 'SHISA5', 'SIK1', 'SIN3A', 'SIN3B', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SKP2', 'SLC2A14', 'SLC2A1', 'SLC2A2', 'SLC2A3', 'SLC6A6', 'SLMO1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMG1', 'SMG7', 'SMYD2', 'SNAI1', 'SNAI2', 'SOCS1', 'SOCS3', 'SOD2', 'SORT1', 'SOX2', 'SOX4', 'SP100', 'SP1', 'SP3', 'SP7', 'SPATA18', 'SPP1', 'SQSTM1', 'SRC', 'SREBF1', 'SREBF2', 'SSRP1', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STEAP3', 'STK11', 'STMN1', 'STUB1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUMO4', 'SUPT16H', 'SUV39H1', 'SUZ12', 'SYK', 'SYP', 'TADA3', 'TAF10', 'TAF11', 'TAF12', 'TAF13', 'TAF15', 'TAF1L', 'TAF1', 'TAF2', 'TAF3', 'TAF4B', 'TAF4', 'TAF5', 'TAF6', 'TAF7L', 'TAF7', 'TAF9B', 'TBPL1', 'TBPL2', 'TBP', 'TCHP', 'TCP1', 'TDG', 'TERT', 'TET2', 'TFAM', 'TFAP2A', 'TFAP2C', 'TFDP1', 'TFF1', 'TGFB1', 'TGM2', 'THBS1', 'TIMP3', 'TLR3', 'TLR9', 'TMEM219', 'TNFAIP3', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF10C', 'TNFRSF10D', 'TNF', 'TNK2', 'TNKS1BP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOE1', 'TOP1', 'TOP2A', 'TOP3A', 'TOPBP1', 'TOPORS', 'TP53AIP1', 'TP53BP1', 'TP53BP2', 'TP53I3', 'TP53INP1', 'TP53RK', 'TP63', 'TP73', 'TPT1', 'TPX2', 'TRAF6', 'TRIAP1', 'TRIM24', 'TRIM28', 'TRIM29', 'TRIM32', 'TRIM59', 'TRIM8', 'TRRAP', 'TSC2', 'TTC5', 'TTK', 'TWIST1', 'TWIST2', 'TXN', 'TYMS', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2D1', 'UBE2E1', 'UBE2I', 'UBE2K', 'UBE2N', 'UBE2Q1', 'UBE2S', 'UBE3A', 'UBN1', 'UCHL1', 'UHRF1', 'USF1', 'USP10', 'USP15', 'USP24', 'USP3', 'USP42', 'USP7', 'UTP14A', 'VEGFA', 'VHL', 'VPRBP', 'VRK1', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WWOX', 'XAF1', 'XIAP', 'XPA', 'XPO1', 'XRCC1', 'XRCC5', 'XRCC6', 'YBX1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'YY1', 'YY2', 'ZBTB33', 'ZBTB7A', 'ZEB1', 'ZEB2', 'ZKSCAN4', 'ZNF148', 'ZNF274', 'ZNF385A', 'ZNF420', 'ZNF668', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 0.6975245724065803 Spearman Correlation: 0.6486627696021807 Coefficient of Determination: 0.4861968303033848 RMSE: 0.3226457072448872 NRMSE: 0.07754042471638722 MAPE: 1201.2489724858074 Pearson Correlation: -0.004711505766351003 Spearman Correlation: 0.18315689721816983 Coefficient of Determination: -1.4081844502450728e+20 RMSE: 5124185386.29971 NRMSE: 1626106050.4886107 MAPE: 1500533058391.9028 Predictor: ElasticNet Pearson Correlation: 0.5276871128040544 Spearman Correlation: 0.5102764248392486 Coefficient of Determination: 0.25681528177783 RMSE: 0.38803945604826534 NRMSE: 0.09325629801688666 MAPE: 746.1206542062722 Pearson Correlation: 0.38868543624679436 Spearman Correlation: 0.337138867068168 Coefficient of Determination: 0.1421308259864148 RMSE: 0.3999499000981952 NRMSE: 0.12691987182603298 MAPE: 189.35330123521044 Predictor: RandomForests Pearson Correlation: 0.49317922833724936 Spearman Correlation: 0.4891545617897889 Coefficient of Determination: 0.23194438457597055 RMSE: 0.3944789522732807 NRMSE: 0.09480388182486921 MAPE: 819.5672573714376 Pearson Correlation: 0.3722068906888985 Spearman Correlation: 0.2941738861973972 Coefficient of Determination: 0.13259807196171824 RMSE: 0.40216590865949 NRMSE: 0.12762309871144006 MAPE: 239.55290041145494 Protein: CTNNB1 Protein Interaction Partners Count: 992 x_train_column_count: 983 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACAN', 'ACP1', 'ACTA1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTN4', 'ACVR1B', 'ACVR1', 'ADAM10', 'ADCY7', 'ADIPOQ', 'AES', 'AFP', 'AHI1', 'AHR', 'AHSA1', 'AJAP1', 'AK9', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'ALPL', 'AMHR2', 'AMH', 'ANXA5', 'AP1M1', 'APC2', 'APCS', 'APC', 'APH1A', 'APH1B', 'AQP1', 'ARHGAP10', 'ARHGAP21', 'ARHGAP32', 'ARHGEF4', 'ARID1A', 'ARID2', 'ARMC7', 'ARMC8', 'ARVCF', 'ARX', 'AR', 'ASCL1', 'ASF1A', 'ASH2L', 'ASIP', 'ATF4', 'ATM', 'AURKA', 'AXIN1', 'AXIN2', 'BAG3', 'BCAR1', 'BCL2L1', 'BCL3', 'BCL6', 'BCL9L', 'BCL9', 'BDNF', 'BGLAP', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BMPR1B', 'BNIP2', 'BRAF', 'BRCA1', 'BRCA2', 'BRMS1L', 'BTRC', 'HILPDA', 'AK8', 'CA2', 'CA9', 'CABLES1', 'CACYBP', 'CALM1', 'CALM3', 'CARM1', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBLL1', 'CBL', 'CBY1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CD24', 'CD34', 'CD40', 'CD44', 'CDC27', 'CDC42', 'CDC73', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH16', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH26', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDHR5', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK8', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDON', 'CDX1', 'CDX2', 'CEBPA', 'CHD8', 'CHRD', 'CHUK', 'CITED1', 'CKAP5', 'CLCA1', 'CLDN3', 'CLDN5', 'COL1A1', 'COPS3', 'COPS5', 'COPS6', 'CREB1', 'CREBBP', 'CRKL', 'CRK', 'CRP', 'CRYAB', 'CSNK1A1L', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK2A3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNAL1', 'CTNNBIP1', 'CTNND1', 'CTNND2', 'CTTN', 'CUL1', 'CUL4A', 'CUL4B', 'CXCR4', 'CXXC4', 'DAB2', 'DACT1', 'DACT2', 'DACT3', 'DCT', 'DCX', 'DDB1', 'DDX39A', 'DDX3X', 'DDX5', 'DHODH', 'DHX9', 'DKK1', 'DKK2', 'DKK3', 'DKK4', 'DLG1', 'DLG2', 'DLG4', 'DLG5', 'DLGAP1', 'DLL4', 'DLX1', 'DNM2', 'DNMT1', 'DPYD', 'DSC1', 'DSC2', 'DSC3', 'DSG1', 'DSG2', 'DSG3', 'DSG4', 'DSP', 'DUSP6', 'DVL1', 'DVL2', 'DVL3', 'E2F3', 'ECM1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'ELAVL1', 'EMD', 'ENAH', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHB2', 'EPHB3', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EXOC3', 'EXOC4', 'EYA4', 'EZH2', 'EZR', 'F2RL2', 'FAF1', 'AMER1', 'FANCA', 'FASLG', 'FAS', 'FAT1', 'FAT4', 'FBXW11', 'FBXW7', 'FERMT2', 'FER', 'FGF10', 'FGF13', 'FGF2', 'FGF3', 'FGF4', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FLT3', 'FMN1', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC2', 'FOXG1', 'FOXL1', 'FOXL2', 'FOXM1', 'FOXN3', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FRAT1', 'FRAT2', 'FRZB', 'FSCN1', 'FSTL1', 'FSTL3', 'FURIN', 'FUS', 'FXR1', 'FYN', 'FZD10', 'FZD1', 'FZD2', 'FZD3', 'FZD4', 'FZD5', 'FZD6', 'FZD7', 'FZD8', 'FZD9', 'GAPDH', 'GATA2', 'GATA4', 'GCG', 'GDF2', 'GDNF', 'GFRA1', 'GJA1', 'GLI1', 'GLI2', 'GLI3', 'GLIS2', 'GLUL', 'GNA11', 'GNA12', 'GNA13', 'GNAQ', 'GNAS', 'GPC3', 'GRIA2', 'GRIP1', 'GSK3A', 'GSK3B', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HAS2', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC7', 'HERC5', 'HES7', 'HGF', 'HGS', 'HHEX', 'HIC1', 'HIF1A', 'HINT1', 'HIPK2', 'HIST1H1C', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HMGB1', 'HNF1A', 'HNF4A', 'HNRNPA1', 'HNRNPA2B1', 'HNRNPK', 'HNRNPM', 'HOXA10', 'HOXB4', 'HPGD', 'HRAS', 'HSP90AB1', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPD1', 'HTRA1', 'HTT', 'HUWE1', 'IBSP', 'IDH1', 'IDH2', 'IFNB1', 'IFRD1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP4', 'IHH', 'IKBKB', 'IL6', 'CXCL8', 'ILK', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IRF3', 'ISG15', 'ISL1', 'ITGAE', 'ITGB1', 'ITGB7', 'ITK', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'AJUBA', 'JUN', 'JUP', 'KANK1', 'KAT2A', 'KAT2B', 'KAT5', 'KCNN1', 'KCTD1', 'KDM1A', 'KDR', 'KIF18B', 'KIF3A', 'KIF5B', 'KIFC3', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KRAS', 'KREMEN1', 'KRIT1', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LATS2', 'LDB1', 'LDHB', 'LDLR', 'LEF1', 'LEO1', 'LGR4', 'LGR5', 'LGR6', 'LHCGR', 'LHX8', 'LIF', 'LIMA1', 'LMNA', 'LMNB1', 'LOX', 'LRP4', 'LRP5L', 'LRP5', 'LRP6', 'LRRFIP1', 'LRRK2', 'LZTFL1', 'MACF1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8IP1', 'MAPK8', 'MAPK9', 'MDFIC', 'MDFI', 'MDK', 'MDM2', 'MED12', 'MED1', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'KMT2D', 'MLLT10', 'MLLT11', 'MLLT4', 'MLLT6', 'KMT2A', 'MME', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP25', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MRAP', 'MSH2', 'MSH6', 'MSN', 'MSX1', 'MSX2', 'MTDH', 'MTOR', 'MUC13', 'MUC1', 'MUTYH', 'MYCN', 'MYC', 'MYF5', 'MYO1D', 'MYO6', 'MYO7A', 'MYOD1', 'MYOG', 'NANOG', 'NCAM1', 'NCCRP1', 'NCOA2', 'NCSTN', 'NDP', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEURL2', 'NF1', 'NF2', 'NFAT5', 'NFKB1', 'NIT1', 'NKD1', 'NLK', 'NME1', 'NOG', 'NONO', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR0B1', 'NR4A1', 'NR4A2', 'NR5A1', 'NR5A2', 'NRAS', 'NRIP1', 'NTRK1', 'NTRK2', 'NTRK3', 'NUDT5', 'NUMB', 'NUP153', 'NUTF2', 'OTX2', 'PAK1', 'PAK2', 'PAK3', 'PANK4', 'PARD3', 'PARD6A', 'PARK2', 'PARP1', 'PAX3', 'PAX6', 'PAX7', 'PAX8', 'PDGFRA', 'PDGFRB', 'PECAM1', 'PGK1', 'PGR', 'PHB', 'JADE1', 'PI3', 'PICK1', 'PIK3CA', 'PIK3R1', 'PIK3R2', 'PIN1', 'PIP5K1A', 'PIP5K1C', 'PITX2', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAG1', 'PLEKHA7', 'PLK1', 'PML', 'PMS2', 'POLE', 'PORCN', 'POTEF', 'POU5F1', 'PPARD', 'PPARG', 'PPM1A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R2B', 'PPP2R5A', 'PPP2R5B', 'PPP2R5C', 'PPP2R5D', 'PPP2R5E', 'PRKACA', 'PRKACB', 'PRKACG', 'PRKAR1A', 'PRKCA', 'PRKCG', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRL', 'PRMT1', 'PROC', 'PROM1', 'PROP1', 'PSEN1', 'PSEN2', 'PSENEN', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTEN', 'PTGES3', 'PTGS2', 'PTH1R', 'PTH', 'PTK2', 'PTK7', 'PTMA', 'PTN', 'PTPN11', 'PTPN13', 'PTPN1', 'PTPN6', 'PTPRB', 'PTPRC', 'PTPRF', 'PTPRG', 'PTPRJ', 'PTPRK', 'PTPRM', 'PTPRU', 'PTPRZ1', 'PVRL1', 'PVRL2', 'PXN', 'PYGO1', 'PYGO2', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RALGDS', 'RANBP3', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RAPGEF2', 'RAPGEF6', 'RAPSN', 'RARA', 'RARB', 'RARG', 'RARS', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP5', 'RBMX', 'RBPJ', 'RBX1', 'RELA', 'REM1', 'RET', 'RHOA', 'RIPK2', 'RNF220', 'RNF43', 'ROBO1', 'ROCK1', 'ROCK2', 'ROR2', 'RPRD1A', 'RPS27A', 'RPSA', 'RSPO1', 'RSPO2', 'RSPO3', 'RSPO4', 'RUNX2', 'RUNX3', 'RUVBL1', 'RUVBL2', 'RXRA', 'RYK', 'S100A4', 'S100A6', 'SALL1', 'SALL4', 'SATB1', 'SCRIB', 'SDHC', 'SERPINE1', 'SETD2', 'SETD7', 'SFN', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHFM1', 'SHH', 'SIAH1', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT6', 'SKP1', 'SLC6A3', 'SLC9A3R1', 'SLCO1B3', 'SLCO2A1', 'SLIT1', 'SLK', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD5', 'SMAD7', 'SMAD9', 'SMARCA2', 'SMARCA4', 'SMARCA5', 'SMARCB1', 'SMO', 'SMURF1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNX1', 'SOST', 'SOX10', 'SOX13', 'SOX17', 'SOX1', 'SOX2', 'SOX3', 'SOX4', 'SOX6', 'SOX7', 'SOX8', 'SOX9', 'SP1', 'SP7', 'SPAG9', 'SPATA13', 'SPEN', 'SPN', 'SPP1', 'SRC', 'STAT3', 'STK11', 'STRAP', 'STX4', 'SUFU', 'SUV39H1', 'SYP', 'TADA3', 'TAX1BP3', 'TAZ', 'TBL1XR1', 'TBL1X', 'TBX5', 'TBX6', 'TCF12', 'TCF3', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TFAP2A', 'TFCP2', 'TFF1', 'TFF2', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBR1', 'TGFBR2', 'TGM2', 'TJP1', 'TJP2', 'TLE1', 'TLE2', 'TLE3', 'TLE4', 'TNFRSF11B', 'TNFSF11', 'TNF', 'TNIK', 'TNKS2', 'TNKS', 'TNS1', 'TOB1', 'TOP2A', 'TP53', 'TRAF4', 'TRIM33', 'TRIM37', 'TRIP10', 'TRRAP', 'TSC2', 'TUBA1A', 'TWIST1', 'TYMS', 'T', 'UBA52', 'UBB', 'UBC', 'UBE2B', 'UBE2R2', 'UBE3A', 'UBR5', 'UCHL1', 'UMPS', 'UPRT', 'USP4', 'USP7', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VAV2', 'VAV3', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VHL', 'VIM', 'WDR64', 'WDTC1', 'WHSC1', 'WIF1', 'WISP1', 'WLS', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'WWTR1', 'XPO1', 'YAP1', 'YARS', 'YEATS4', 'YES1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'ZAP70', 'ZAR1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZIC3', 'ZNRF3', 'ZYX', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.798410787099475 Spearman Correlation: 0.754734253029814 Coefficient of Determination: 0.6374596795041507 RMSE: 0.4283594947923244 NRMSE: 0.1034584810144731 MAPE: 508.90405900926277 Pearson Correlation: -0.040742453026228656 Spearman Correlation: 0.21470841282310255 Coefficient of Determination: -1.1503194162829056e+20 RMSE: 8606558296.128344 NRMSE: 1809468988.3374703 MAPE: 541719296459.8445 Predictor: ElasticNet Pearson Correlation: 0.5796664787858163 Spearman Correlation: 0.5411855003513519 Coefficient of Determination: 0.3052816460262081 RMSE: 0.5929726012326072 NRMSE: 0.14321625959632095 MAPE: 447.26685623909043 Pearson Correlation: 0.33484159842757827 Spearman Correlation: 0.300435167520792 Coefficient of Determination: 0.03802097777495683 RMSE: 0.7870513902133786 NRMSE: 0.16547207766659208 MAPE: 617.2405066775293 Predictor: RandomForests Pearson Correlation: 0.45181852252060817 Spearman Correlation: 0.4322784651126818 Coefficient of Determination: 0.15699975789687814 RMSE: 0.6531968627541221 NRMSE: 0.1577617773051208 MAPE: 565.824857853081 Pearson Correlation: 0.24313540396064232 Spearman Correlation: 0.22451956887205285 Coefficient of Determination: -0.05599387229231856 RMSE: 0.8246145408191293 NRMSE: 0.1733694686778087 MAPE: 763.414044892582 Protein: CCNE1 Protein Interaction Partners Count: 350 x_train_column_count: 347 x_train columns: ['ABL1', 'AKT1', 'AKT2', 'AKT3', 'ALDH18A1', 'ANAPC10', 'ANAPC13', 'ANAPC1', 'ANAPC2', 'ANAPC4', 'ANAPC5', 'ANAPC7', 'ANXA5', 'ARID1A', 'AR', 'ATM', 'AURKA', 'AURKB', 'BARD1', 'BCL2L1', 'BIRC5', 'BRCA1', 'BRCA2', 'BTG2', 'BTRC', 'BUB1B', 'BUB1', 'BUB3', 'RGCC', 'MLIP', 'CABLES1', 'CALM1', 'CAPRIN1', 'CASP3', 'CASP9', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNF', 'CCNG1', 'CCNH', 'CCNK', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CDC16', 'CDC20', 'CDC23', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC26', 'CDC27', 'CDC45', 'CDC6', 'CDC7', 'CDCA2', 'CDCA5', 'CDCA8', 'CDH1', 'CDK12', 'CDK13', 'CDK14', 'CDK15', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CENPA', 'CENPE', 'CHAF1A', 'CHD1L', 'CHEK1', 'CHEK2', 'CINP', 'CKS1B', 'CKS2', 'COPS5', 'CREBBP', 'CSK', 'CTNNB1', 'CUL1', 'CUL3', 'CUL4B', 'DBF4B', 'DBF4', 'DGCR8', 'DICER1', 'DTL', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'EBNA1BP2', 'ECT2', 'EGFR', 'EGF', 'ELAVL1', 'ELSPBP1', 'EP400', 'ERBB2', 'ERBB3', 'ERBB4', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM58A', 'FAM83H', 'FBXO5', 'FBXW7', 'FEN1', 'FGFR1', 'FGFR2', 'FGFR3', 'FOXM1', 'FZR1', 'GAPDH', 'GLI1', 'GMNN', 'GSK3B', 'H1F0', 'HDAC1', 'HEATR3', 'HERC5', 'HIST1H1A', 'HIST1H1B', 'HIST1H4A', 'HRAS', 'IFNAR1', 'IGF1R', 'IGF1', 'ITPKB', 'JUN', 'KIF11', 'KIF20A', 'KIF23', 'KIF2C', 'KPNA2', 'KRAS', 'LATS2', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'GMNC', 'MAD2L1', 'MAPK3', 'MATK', 'MAX', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDM2', 'MEGF11', 'MELK', 'MKI67', 'KMT2D', 'KMT2B', 'MNAT1', 'MRE11A', 'MTOR', 'MYBL2', 'MYC', 'NBN', 'NF1', 'NFYB', 'NMI', 'NOTCH1', 'NOTCH3', 'NPAT', 'NRAS', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PARK2', 'PARP1', 'PCBP4', 'PCNA', 'PIK3CA', 'PIK3R1', 'PKMYT1', 'PLK1', 'PLK4', 'POLA1', 'POLD1', 'PPP1R1C', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R4', 'PRC1', 'PRKAR1A', 'PRKAR2A', 'PRMT5', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB10', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSMF1', 'PTEN', 'PTGDR', 'PTK6', 'PTTG1', 'RAD51', 'RAD54L', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RBX1', 'REL', 'REM1', 'RHOA', 'RHOBTB3', 'RINT1', 'RNASE1', 'RPRD1A', 'RPS27A', 'RRM1', 'RRM2', 'RRN3', 'RSF1', 'SHFM1', 'SKP1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'ST8SIA1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STK3', 'STK4', 'TARBP1', 'TCP1', 'TERF1', 'TERT', 'TFDP1', 'TK1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TPX2', 'TTK', 'TUBG1', 'TYMS', 'UBA52', 'UBB', 'UBC', 'UBE2C', 'UBE2QL1', 'UBE2S', 'UHRF2', 'WEE1', 'WEE2', 'XIAP', 'YAP1', 'ZNF217', 'ZNF33A', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.3259441537611361 Spearman Correlation: 0.3305215662948958 Coefficient of Determination: -8.568493209986224 RMSE: 1.5615103306478348 NRMSE: 0.3768396193372674 MAPE: 402.342102880252 Pearson Correlation: -0.025573758941439824 Spearman Correlation: 0.05657647194186629 Coefficient of Determination: -9.957301711705538e+23 RMSE: 451125991160.09406 NRMSE: 184087974847.01465 MAPE: 5501427481682.821 Predictor: ElasticNet Pearson Correlation: 0.5599504182943039 Spearman Correlation: 0.4487299227813127 Coefficient of Determination: 0.28868775480226994 RMSE: 0.42574859930904974 NRMSE: 0.10274599978498679 MAPE: 86.86506507939055 Pearson Correlation: 0.4928517979309558 Spearman Correlation: 0.2467386880059246 Coefficient of Determination: 0.21806748457340774 RMSE: 0.39977133676088883 NRMSE: 0.16313202348848807 MAPE: 119.7596843162247 Predictor: RandomForests Pearson Correlation: 0.562701886772392 Spearman Correlation: 0.46714638237563894 Coefficient of Determination: 0.30953448244616977 RMSE: 0.41946340940523463 NRMSE: 0.10122919357222643 MAPE: 88.82706986381208 Pearson Correlation: 0.4268170042517937 Spearman Correlation: 0.40834894293297885 Coefficient of Determination: 0.17969517887856845 RMSE: 0.40946298478972176 NRMSE: 0.1670868296701713 MAPE: 132.9888626238666 Protein: CCND1 Protein Interaction Partners Count: 857 x_train_column_count: 847 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTL6B', 'AFP', 'AHR', 'AKAP12', 'AKAP8', 'AKR1B10', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDOA', 'ALK', 'ANO1', 'ANXA5', 'APAF1', 'APC', 'APEX1', 'AREG', 'ARHGEF2', 'ARID1A', 'ARID1B', 'ARID2', 'ARID4A', 'AR', 'ASIP', 'ATF2', 'ATF3', 'ATF4', 'ATM', 'ATXN1', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'B2M', 'BANP', 'BARX2', 'BAX', 'BCAR1', 'BCAR3', 'BCCIP', 'BCL2A1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL3', 'BCL6', 'BCL9', 'BECN1', 'BGLAP', 'BHLHE40', 'BIRC2', 'BIRC3', 'BIRC5', 'BMI1', 'BMP4', 'BMP6', 'BRAF', 'BRCA1', 'BRCA2', 'BRD2', 'BRD4', 'BTC', 'BTG2', 'BTRC', 'RGCC', 'COPRS', 'CA9', 'CARD11', 'CARM1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBFB', 'CCDC62', 'CCL2', 'CCL5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNC', 'CCND2', 'CCND3', 'CCNDBP1', 'CCNE1', 'CCNE2', 'CCNG2', 'CCNH', 'CCNK', 'CCNL1', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CD19', 'CD22', 'CD24', 'CD34', 'CD38', 'CD44', 'CD5', 'CD79A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC6', 'CDC73', 'CDCA7L', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK12', 'CDK13', 'CDK14', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK20', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CDX2', 'CENPE', 'CEP57', 'CFLAR', 'CHEK1', 'CHEK2', 'CHKA', 'CHUK', 'CKS1B', 'CKS2', 'CLCN3', 'COL1A1', 'CR2', 'CREB1', 'CREBBP', 'CRKL', 'CRYAB', 'CSF2', 'CTBP1', 'CTGF', 'CTNNB1', 'CTNND1', 'CTTN', 'CUL1', 'CUL3', 'CUL7', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'CYR61', 'DACH1', 'DAXX', 'DDIT3', 'DDX53', 'DECR1', 'DHFR', 'DICER1', 'DKK1', 'DKK3', 'DLL1', 'DMTF1', 'DND1', 'DNMT1', 'DNMT3A', 'DNTT', 'DVL1', 'DVL2', 'DYRK1A', 'DYRK1B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EDN1', 'EEF1A1', 'EGFR', 'EGF', 'EGLN2', 'EGR1', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF3I', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4E', 'EIF4G1', 'ELAVL1', 'ELSPBP1', 'EP300', 'EPCAM', 'EPHA2', 'EPHA7', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EWSR1', 'EYA1', 'EZH2', 'FABP4', 'FADD', 'FAM58A', 'FAM83H', 'FASLG', 'FAT1', 'FBXO31', 'FBXO4', 'FBXW7', 'FBXW8', 'FGF13', 'FGF19', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FHL2', 'FIGF', 'FLCN', 'FLNA', 'FLT1', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXC1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FRZB', 'FSTL3', 'FZD1', 'FZD2', 'FZD7', 'FZD9', 'FZR1', 'GADD45A', 'GAL', 'GAPDH', 'GAST', 'GATA3', 'GATA4', 'GDF15', 'GDF2', 'GGNBP2', 'GGT1', 'GIT1', 'GJA1', 'GJB1', 'GLI1', 'GLI2', 'GLI3', 'GLTSCR2', 'GNB2L1', 'GPER1', 'GRB2', 'GREB1', 'GRM4', 'GRP', 'GSK3B', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HBEGF', 'HBZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC4', 'HEXIM1', 'HEY1', 'HGF', 'HIF1A', 'HIST1H2AA', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AH', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AC', 'HIST2H2BE', 'HIST2H4A', 'HIST4H4', 'HMGA2', 'HMOX1', 'HNF1A', 'HNF4A', 'HNRNPD', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB8', 'ICAM1', 'ID1', 'ID2', 'IFNAR1', 'IFNB1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP3', 'IGFBP5', 'IHH', 'IKBKB', 'IL10', 'IL17A', 'IL2', 'IL4', 'IL6', 'IL7', 'CXCL8', 'ILK', 'INSM1', 'INS', 'IRF1', 'IRS1', 'ISG15', 'ITGB1', 'ITPKB', 'ITPKC', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUNB', 'JUND', 'JUN', 'KAT2A', 'KAT2B', 'KDM1A', 'KDM5B', 'KDR', 'KHDRBS1', 'KIF18B', 'KIN', 'KITLG', 'KIT', 'KLF13', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KRAS', 'KRT10', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LDB3', 'LEF1', 'LEP', 'LGALS3', 'LGR5', 'LIMK2', 'LIMS1', 'LIN28B', 'LMNA', 'LMNB1', 'LOX', 'LRP5', 'LRP6', 'LYN', 'MAFB', 'MAF', 'MAML1', 'MAML2', 'MAML3', 'MAMLD1', 'MAP2K1', 'MAP2K2', 'MAP2K4', 'MAP2K7', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDK', 'MDM2', 'MDM4', 'MEN1', 'MET', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'MLXIPL', 'MME', 'MMP11', 'MMP14', 'MMP15', 'MMP1', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MNAT1', 'MOV10', 'MSH2', 'MST1', 'MTOR', 'MUC1', 'MYBL2', 'MYB', 'MYCN', 'MYC', 'MYEOV', 'MYF5', 'MYOD1', 'MYOG', 'NACA2', 'NADSYN1', 'NANOG', 'NCAM1', 'NCOA1', 'NCOA3', 'NCOR1', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NGF', 'NME1', 'NME2', 'NMI', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NQO1', 'NR0B2', 'NR1H3', 'NR2E1', 'NR3C1', 'NR4A3', 'NRAS', 'NRF1', 'NUDT21', 'ODC1', 'ORAI1', 'ORAOV1', 'ORC4', 'PAK1', 'PAK4', 'PARK2', 'PARP1', 'PAX2', 'PAX5', 'PAX6', 'PBRM1', 'PBX3', 'PCNA', 'PDCD4', 'PDGFRA', 'PDGFRB', 'PDZK1', 'PECAM1', 'PELP1', 'PGR', 'PI3', 'PI4K2A', 'PIK3CA', 'PIK3R1', 'PKLR', 'PKM', 'PLAUR', 'PLAU', 'PLK1', 'PMAIP1', 'POLR2A', 'POTEF', 'POU2F1', 'POU5F1', 'PPARG', 'PPP2R4', 'PRDM5', 'PRKACA', 'PRL', 'PRMT5', 'PRNP', 'PROM1', 'PSAT1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTCHD3', 'PTEN', 'PTF1A', 'PTGS2', 'PTHLH', 'PTH', 'PTK2', 'PTK6', 'PTPN11', 'PTPRCAP', 'PTPRC', 'PXN', 'RAD51', 'RAF1', 'RALA', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RBX1', 'RCC1', 'RELA', 'RELB', 'REL', 'REM1', 'RET', 'RHEB', 'RHOA', 'RHOC', 'RICTOR', 'RNASE1', 'DROSHA', 'RND3', 'RNMT', 'ROCK1', 'RPRD1B', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KA6', 'RPS6KB1', 'RPS6', 'RPTOR', 'RREB1', 'RSF1', 'RUNX1', 'RUNX2', 'RUNX3', 'SDC1', 'SDHC', 'SENP1', 'SERPINE1', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHC1', 'SHFM1', 'SHH', 'SIRT1', 'SIX1', 'SIX3', 'SKP1', 'SKP2', 'SLC25A16', 'SLC25A6', 'SLC2A1', 'SLC35B2', 'SLC39A4', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMO', 'SNAI1', 'SNAI2', 'SNCA', 'SNIP1', 'SNW1', 'SNX33', 'SOCS3', 'SOX11', 'SOX17', 'SOX2', 'SOX4', 'SOX6', 'SOX9', 'SP1', 'SPN', 'SPP1', 'SPRY1', 'SRC', 'SREBF1', 'STAT1', 'STAT3', 'STAT4', 'STAT5A', 'STAT5B', 'STAT6', 'STC2', 'STIM1', 'STK11', 'STK24', 'STMN1', 'SUFU', 'SULF2', 'SUV39H1', 'TAF1', 'TBP', 'TBX2', 'TCEAL7', 'TCF4', 'TCF7L2', 'TCF7', 'TERT', 'TET3', 'TFDP1', 'TFF1', 'TGFA', 'TGFB1', 'TGFBR2', 'THBS1', 'THRA', 'THRB', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLR9', 'TM4SF1', 'TMPRSS4', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF8', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP2A', 'TP53', 'TP63', 'TP73', 'TRPV2', 'TSC22D3', 'TSC2', 'TWIST1', 'TXN', 'TYMS', 'UBA52', 'UBA7', 'UBB', 'UBC', 'UBE2C', 'UBTF', 'URGCP', 'USP18', 'USP2', 'USP9X', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VIP', 'VRK1', 'WDR77', 'WDTC1', 'WEE1', 'WHSC1', 'WIF1', 'WISP1', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'XBP1', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YY1', 'ZBTB17', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 0.6752820565617033 Spearman Correlation: 0.6197101635678924 Coefficient of Determination: 0.39156279309178454 RMSE: 0.18744531260159278 NRMSE: 0.11975652790124888 MAPE: 445.92752368501414 Pearson Correlation: 0.11414685939261479 Spearman Correlation: 0.0448765987113451 Coefficient of Determination: -7.533993358483345e+22 RMSE: 62856704757.090485 NRMSE: 39642220457.29723 MAPE: 27449826319111.98 Predictor: ElasticNet Pearson Correlation: 0.34654624393404393 Spearman Correlation: 0.3402833592504201 Coefficient of Determination: 0.0909418315790137 RMSE: 0.22911975666085 NRMSE: 0.14638182278583842 MAPE: 589.6284624281461 Pearson Correlation: 0.11717713147724257 Spearman Correlation: 0.12012753420101778 Coefficient of Determination: 0.006682299968105543 RMSE: 0.22823543913342195 NRMSE: 0.14394263315679992 MAPE: 568.7962806091023 Predictor: RandomForests Pearson Correlation: 0.43090013983009295 Spearman Correlation: 0.4007757992525716 Coefficient of Determination: 0.11167008322240801 RMSE: 0.2264925110916463 NRMSE: 0.14470330758081695 MAPE: 596.9734719070668 Pearson Correlation: 0.2819347628337036 Spearman Correlation: 0.16034404504855418 Coefficient of Determination: 0.05671955563941389 RMSE: 0.2224126109923925 NRMSE: 0.14027031470256845 MAPE: 540.8114573563761 Protein: ERBB2 Protein Interaction Partners Count: 663 x_train_column_count: 655 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACPP', 'ACTA2', 'ACTB', 'ACTG1', 'ADAM10', 'ADAM17', 'ADRB2', 'AFP', 'AGRN', 'AKT1S1', 'AKT1', 'AKT2', 'ALB', 'ALDH1A1', 'ALK', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'ANO1', 'ANXA2', 'ANXA5', 'AP2B1', 'APP', 'AREG', 'ARHGEF11', 'ARHGEF12', 'ARID1A', 'ARL6IP5', 'AR', 'ATM', 'ATP2B2', 'AURKB', 'AXIN1', 'BAG1', 'BARD1', 'BCAR1', 'BCAR3', 'BCAS1', 'BCL2L11', 'BCL2L1', 'BDNF', 'BECN1', 'BEST1', 'BIRC5', 'BLNK', 'BMI1', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BSG', 'BTC', 'MIEN1', 'CA9', 'CALU', 'CARTPT', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAV1', 'CBLB', 'CBLC', 'CBL', 'CCL27', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD19', 'CD22', 'CD247', 'CD24', 'CD274', 'CD28', 'CD33', 'CD34', 'CD44', 'CD46', 'CD52', 'CD68', 'CD6', 'CD80', 'CD82', 'CDC37', 'CDC42', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK4', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CEACAM5', 'CEP70', 'CHEK2', 'CHGA', 'CHKA', 'CHKB', 'CISH', 'CLDN3', 'CLDN4', 'CLDN7', 'CLTC', 'CNN1', 'COPS5', 'CPNE3', 'CREB1', 'CRKL', 'CRK', 'YBX3', 'CSF1', 'CSF2', 'CSF3', 'CSK', 'CSPG4', 'CTAG1B', 'CTLA4', 'CTNNB1', 'CTNND1', 'CTSB', 'CTSD', 'CTTN', 'CUL5', 'CXCL12', 'CXCR1', 'CXCR4', 'CYCS', 'CYP19A1', 'CYTIP', 'DCN', 'DDX41', 'DDX53', 'DHH', 'DIAPH1', 'DICER1', 'DLG4', 'DMTF1', 'DNAJA3', 'DNM2', 'DNMT1', 'DOCK1', 'DOCK7', 'DUSP6', 'E2F1', 'E2F3', 'EEA1', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EGFR', 'EGF', 'EIF3A', 'EIF4EBP1', 'EIF4E', 'ELAVL1', 'ELF3', 'EML4', 'ENO2', 'EP300', 'EPCAM', 'EPGN', 'EPHA2', 'EPS15', 'EPX', 'ERAL1', 'ERBB2IP', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ERRFI1', 'ESCO1', 'ESR1', 'ESR2', 'ESRRB', 'ETS1', 'ETS2', 'ETV4', 'ETV6', 'EZH2', 'EZR', 'FASLG', 'FASN', 'FBXW7', 'FCGR1A', 'FCGR1B', 'FCGRT', 'FGF10', 'FGF13', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FIGF', 'FLT1', 'FLT3LG', 'FN1', 'FOLH1', 'FOLR1', 'FOS', 'FOXA1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXP3', 'FREM2', 'FSIP1', 'FYN', 'GAB1', 'GABPB1', 'GAPDH', 'GATA3', 'GATA4', 'GDF2', 'GLI1', 'GLI2', 'GLS', 'GNA11', 'GNAQ', 'GNAS', 'GNRH1', 'GPER1', 'GRAP2', 'GRB2', 'GRB7', 'GSTP1', 'GZMB', 'H2AFX', 'H2AFY', 'HBEGF', 'HDAC1', 'HDAC6', 'HEATR6', 'HGF', 'HIF1A', 'HK1', 'HMGA2', 'HNF4A', 'HOXB7', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPG2', 'ICAM1', 'ID1', 'IDH1', 'IDH2', 'IFNG', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IHH', 'IL10', 'IL2', 'IL4', 'IL6R', 'IL6ST', 'IL6', 'CXCL8', 'ILK', 'INPP4B', 'INS', 'IQGAP1', 'IQSEC1', 'IRS1', 'ITGA5', 'ITGA6', 'ITGAV', 'ITGB1', 'ITGB3', 'ITGB4', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JUN', 'JUP', 'KDR', 'KITLG', 'KLK3', 'KLRK1', 'KRAS', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'L1CAM', 'LAMP1', 'LCN2', 'LDHA', 'LEP', 'LIN28A', 'LIN7A', 'LIN7B', 'LIN7C', 'LINGO1', 'LOX', 'LRIG1', 'LRPPRC', 'MAGEA1', 'MAGEA3', 'MAGED4B', 'MAGED4', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK8', 'MATK', 'MCL1', 'MDK', 'MDM2', 'MEMO1', 'MET', 'MGMT', 'MKI67', 'MLANA', 'MLH1', 'KMT2C', 'MME', 'MMP11', 'MMP14', 'MMP16', 'MMP1', 'MMP2', 'MMP7', 'MMP9', 'MPP1', 'MRAP', 'MRAS', 'MSH2', 'MSH6', 'MSLN', 'MTA1', 'MTOR', 'MUC13', 'MUC16', 'MUC1', 'MUC4', 'MUC6', 'MUCL1', 'MYBL2', 'MYCN', 'MYC', 'NANOG', 'NCAM1', 'NCL', 'NCOA1', 'NCOA3', 'NCOR1', 'NDRG1', 'NF1', 'NF2', 'NFE2L2', 'NGF', 'NISCH', 'NME1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NR1H4', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NRP1', 'NTF3', 'NTF4', 'OPCML', 'OSMR', 'PA2G4', 'PADI2', 'PAK1', 'PALB2', 'PAQR3', 'PARP1', 'PAX2', 'PCSK9', 'PDCD1LG2', 'PDCD1', 'PDCD4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PDGFRA', 'PDPN', 'PECAM1', 'PELP1', 'PEPD', 'PFKFB3', 'PGAP3', 'PGF', 'PGR', 'PI3', 'PIK3C2A', 'PIK3C2B', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIN1', 'PIP', 'PLAUR', 'PLAU', 'PLCG1', 'PLCG2', 'PLEK', 'PLG', 'PLXNB1', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPP3CA', 'PRDM10', 'PRF1', 'PRKACA', 'PRL', 'PROM1', 'PSCA', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'PTPN1', 'PTPRC', 'PTPRO', 'PTPRU', 'PTS', 'PXN', 'RAB25', 'RAD51', 'RAF1', 'RANBP2', 'RARA', 'RASA1', 'RASA2', 'RASSF1', 'RB1', 'RBPJ', 'RDX', 'RECK', 'REM1', 'REN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'S100A14', 'SCGB2A2', 'SCUBE2', 'SDC1', 'SDHC', 'SEMA3D', 'SEMA4D', 'SERPINB5', 'SERPINE1', 'SFRP1', 'PEAK1', 'SH3BGRL3', 'SH3BGRL', 'SH3TC2', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SIAH2', 'PMEL', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC4A7', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SMUG1', 'SMYD3', 'SNAI1', 'SNAI2', 'SOCS1', 'SOS1', 'SOX10', 'SOX2', 'SOX9', 'SP3', 'SPP1', 'SPRY2', 'SRCIN1', 'SRC', 'STARD3', 'STAT1', 'STAT2', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STOM', 'STUB1', 'SYP', 'TAGLN', 'TBX1', 'TERT', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TFRC', 'TGFA', 'TGFB1', 'THBS1', 'THRA', 'TIMP1', 'TJP1', 'TMPRSS2', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF4', 'TNFRSF8', 'TNFRSF9', 'TNFSF11', 'TNF', 'TNS1', 'TNS3', 'TNS4', 'TOB1', 'TOP1', 'TOP2A', 'TP53', 'TP63', 'TSC2', 'TWIST1', 'TYMS', 'TYR', 'UBA52', 'UBB', 'UBC', 'USP2', 'USP9X', 'VAV1', 'VAV2', 'VAV3', 'VCL', 'VEGFA', 'VEGFB', 'VEGFC', 'VIM', 'WASL', 'WDFY2', 'WDTC1', 'WNT10A', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7B', 'WNT9A', 'WNT9B', 'WT1', 'WWOX', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YES1', 'YY1', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 0.7472139357259805 Spearman Correlation: 0.6800360682269324 Coefficient of Determination: 0.5505883883371038 RMSE: 0.6575271029856201 NRMSE: 0.1120205637401605 MAPE: 615.12753103298 Pearson Correlation: 0.05365453921587964 Spearman Correlation: 0.24007712389729777 Coefficient of Determination: -5.3911838406220235e+19 RMSE: 7611687385.209283 NRMSE: 1370635535.92561 MAPE: 555916093843.713 Predictor: ElasticNet Pearson Correlation: 0.6068706041901631 Spearman Correlation: 0.5455459996205508 Coefficient of Determination: 0.34639858902509624 RMSE: 0.7929540193989866 NRMSE: 0.1350927678414547 MAPE: 777.94467103389 Pearson Correlation: 0.5778073213206978 Spearman Correlation: 0.47073463601158305 Coefficient of Determination: 0.27149759406092944 RMSE: 0.8848188531710753 NRMSE: 0.15932921330555613 MAPE: 323.1729388747517 Predictor: RandomForests Pearson Correlation: 0.5657007725563314 Spearman Correlation: 0.4648207747425002 Coefficient of Determination: 0.2197795983656573 RMSE: 0.8663635365803557 NRMSE: 0.14759928728561184 MAPE: 639.085618277225 Pearson Correlation: 0.5639033295940726 Spearman Correlation: 0.43473088844671115 Coefficient of Determination: 0.12759293423425477 RMSE: 0.9682744221186623 NRMSE: 0.1743570465154072 MAPE: 216.49199529603115 Protein: ERBB3 Protein Interaction Partners Count: 245 x_train_column_count: 247 x_train columns: ['ADAM17', 'AGRN', 'AGTR2', 'AKT1', 'AKT2', 'AKT3', 'ALAS2', 'ALB', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'APIP', 'AREG', 'AR', 'BAMBI', 'BDNF', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BTC', 'CADM4', 'CASK', 'CASP3', 'CBLB', 'CBLC', 'CBL', 'CCND1', 'CCNE1', 'CD44', 'CD82', 'CDC42', 'CDH1', 'CDK4', 'CDK5', 'CDKN1B', 'CDKN2A', 'CLEC16A', 'COMMD5', 'COQ7', 'CRKL', 'CRK', 'CRYZL1', 'CSF1', 'CSK', 'CSPG5', 'CTNNB1', 'DCN', 'DHH', 'DOCK7', 'DUSP6', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EIF4EBP1', 'EIF4E', 'EML4', 'EPCAM', 'EPGN', 'EPN1', 'ERBB2IP', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'ESR2', 'FBXO9', 'FGF10', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FIGF', 'FKBP14', 'FLNA', 'FLT3LG', 'FN1', 'FOXA1', 'FOXO3', 'FREM2', 'FTSJ1', 'GAB1', 'GAPDH', 'GLE1', 'GRB2', 'GRB7', 'GRHL2', 'HBEGF', 'HGF', 'HGS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPG2', 'IGF1', 'IGF2', 'IL6ST', 'ILK', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'ITPKB', 'JAK1', 'JAK2', 'JUN', 'KDR', 'KITLG', 'KRAS', 'L1CAM', 'LAMA1', 'LAMB1', 'LAMC2', 'LIN7A', 'LIN7B', 'LIN7C', 'LRIG1', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARCH7', 'MDM2', 'MET', 'MITF', 'MMP9', 'MRPL49', 'MTOR', 'MUC1', 'MUC4', 'MYC', 'N4BP1', 'NDRG1', 'NEDD4L', 'NEDD4', 'NF1', 'NGF', 'NICN1', 'NOTCH1', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NTF3', 'NTF4', 'OAT', 'PA2G4', 'PARK7', 'PCSK9', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PGR', 'PI3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIP5K1C', 'PLCG1', 'PLCG2', 'PPP1R9A', 'PRKACA', 'PTEN', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN22', 'PTPN2', 'RASA1', 'RASA2', 'REM1', 'RGS4', 'RHOA', 'RHOC', 'RNF41', 'ROR1', 'RRAS2', 'SH2B3', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SLC25A16', 'SMAD4', 'SNAI2', 'SOS1', 'SOX10', 'SOX2', 'SPARC', 'SPRY2', 'SRC', 'STAT3', 'STAT5A', 'STAT5B', 'SYN3', 'TCF7L2', 'TGFA', 'TMEFF2', 'TNFRSF13C', 'TNS1', 'TP53', 'USP8', 'VAV1', 'VAV2', 'VAV3', 'VEGFA', 'VEGFB', 'VEGFC', 'WNT1', 'WNT5A', 'ZEB1', 'ZNF217', 'KRBOX4', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.5049449138625985 Spearman Correlation: 0.48719588134681335 Coefficient of Determination: -0.06722221104148973 RMSE: 0.49351126700353437 NRMSE: 0.13494274757492347 MAPE: 423.9667874097006 Pearson Correlation: -0.11051849735419322 Spearman Correlation: 0.040918328306119724 Coefficient of Determination: -4.96676552678073e+22 RMSE: 85708609261.52441 NRMSE: 42186284810.78345 MAPE: 17591877099809.684 Predictor: ElasticNet Pearson Correlation: 0.4024674485671841 Spearman Correlation: 0.4030399666879736 Coefficient of Determination: 0.14953090899500154 RMSE: 0.44055375963785964 NRMSE: 0.12046236581579291 MAPE: 230.47461626362514 Pearson Correlation: 0.2637454053693348 Spearman Correlation: 0.2556565543211263 Coefficient of Determination: 0.05140194456406755 RMSE: 0.37456632854369887 NRMSE: 0.18436376406783525 MAPE: 203.1654876671737 Predictor: RandomForests Pearson Correlation: 0.4498728403959231 Spearman Correlation: 0.4024412614101389 Coefficient of Determination: 0.1420580439166913 RMSE: 0.4424850458550239 NRMSE: 0.12099044508352695 MAPE: 234.32548615375418 Pearson Correlation: 0.26738743442888824 Spearman Correlation: 0.27914806648267165 Coefficient of Determination: 0.06737626562927479 RMSE: 0.37139910334182036 NRMSE: 0.18280483707581466 MAPE: 207.06615711933134 Fold: 5 Protein: RB1 Protein Interaction Partners Count: 369 x_train_column_count: 366 x_train columns: ['AATF', 'ABCC1', 'ABL1', 'ACTL6A', 'ACTL6B', 'AFAP1', 'AHR', 'AKT1', 'ANXA5', 'ARID1A', 'ARID1B', 'ARID4A', 'ARMCX1', 'ARMCX2', 'ARMCX3', 'ARNT', 'AR', 'ASF1A', 'ATF2', 'ATM', 'AURKB', 'BCR', 'BDP1', 'BGLAP', 'BRCA1', 'BRF1', 'FAM208A', 'C4BPA', 'CABIN1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CBFB', 'CBX1', 'CBX4', 'CBX5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNT2', 'CDC25A', 'CDC27', 'CDC6', 'CDH1', 'CDK14', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPA', 'CEBPB', 'CEBPD', 'CEBPE', 'CHEK1', 'CHEK2', 'CLNK', 'COL1A1', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUX1', 'DCAF10', 'DGKZ', 'DNAJA3', 'DNMT1', 'DNMT3A', 'DUSP1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EGFR', 'EGF', 'EID1', 'EIF2AK1', 'EIF2AK4', 'AGO2', 'ELF1', 'ENC1', 'EP300', 'ERBB2', 'ESD', 'ESR1', 'ESR2', 'EZH2', 'FBXW7', 'FMO5', 'FOS', 'FOXM1', 'FRK', 'FZR1', 'G6PD', 'GAPDH', 'GATA1', 'GJA1', 'GNB2L1', 'GRB2', 'GSC', 'GTF2H1', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HARS2', 'HARS', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC8', 'HDC', 'HES1', 'HIF1A', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HIST4H4', 'HMGA1', 'HMGA2', 'HRAS', 'HSP90AA1', 'HSPA1A', 'HSPA8', 'ID2', 'IFI16', 'INS', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'KDM2A', 'KDM4A', 'KDM5A', 'KDM5B', 'PPP1R26', 'KIF11', 'KRAS', 'KRT10', 'KRT14', 'KRT5', 'L3MBTL2', 'L3MBTL1', 'LIMD1', 'LIN52', 'LIN54', 'LIN9', 'LMNA', 'LOR', 'LPAR6', 'MAF', 'MAP2K7', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEF2C', 'MORF4L1', 'MRFAP1', 'MRPL11', 'MRPS18B', 'MSH6', 'MTL5', 'MYBL2', 'MYC', 'MYOD1', 'NACC2', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NCR1', 'NDC80', 'NEO1', 'NFYA', 'NFYB', 'NFYC', 'NGF', 'NOTCH1', 'NPM1', 'NRAS', 'ORC1', 'PA2G4', 'PAX2', 'PAX3', 'PAX5', 'PAX6', 'PAX8', 'PCNA', 'PELP1', 'PGR', 'PHB', 'PHF21B', 'PIAS4', 'PIK3CA', 'PIK3R1', 'PIK3R3', 'PLK1', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPIA', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP1R3A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R3B', 'PPRC1', 'PRB1', 'PRB3', 'PRB4', 'PRDM2', 'PRH1', 'PRH2', 'PRIM1', 'PRIM2', 'PRKCB', 'PRMT2', 'PSMA7', 'PSMC1', 'PSMD10', 'PTEN', 'PTGDR', 'RAF1', 'RB1CC1', 'RBAK', 'RBBP4', 'RBBP5', 'RBBP6', 'RBBP7', 'RBBP8', 'RBBP9', 'RBL1', 'RBL2', 'RBFOX2', 'RFC1', 'RPS6KB1', 'RUNX2', 'S100A6', 'SETD1B', 'SETD7', 'SIRT1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMC1A', 'SMC2', 'SMC4', 'SMC5', 'SMYD2', 'SNW1', 'SP100', 'SP1', 'SP3', 'SPI1', 'STAM', 'STAT3', 'SUV39H1', 'SUV420H2', 'SUZ12', 'TAF1', 'TBP', 'TERT', 'TFAP2A', 'TFDP1', 'TFDP3', 'TGM2', 'THAP1', 'TMPO', 'TNS1', 'TOP2A', 'TP53BP1', 'TP53', 'TP73', 'TRDMT1', 'TRIM27', 'TTK', 'UBE2I', 'UBE3A', 'UBL4A', 'UBN1', 'UBR4', 'UBTF', 'UHRF1', 'USP4', 'USP7', 'VEGFA', 'VPS39', 'WDR59', 'WDR73', 'WEE1', 'WWTR1', 'YAP1', 'YY1', 'ZBTB16', 'ZBTB7A', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.2794800058174776 Spearman Correlation: 0.2672143999653435 Coefficient of Determination: -0.6210853980580808 RMSE: 0.2978122589139334 NRMSE: 0.14712372552226446 MAPE: 816.8173651562063 Pearson Correlation: -0.0014450264522803068 Spearman Correlation: 0.023400055333875104 Coefficient of Determination: -6.8739503909548805e+25 RMSE: 1992886579650.65 NRMSE: 1004823517965.1543 MAPE: 386152155039229.75 Predictor: ElasticNet Pearson Correlation: 0.2544815496930259 Spearman Correlation: 0.257669383634886 Coefficient of Determination: 0.04489107665978864 RMSE: 0.22859465688957215 NRMSE: 0.11292919129228009 MAPE: 145.12705785729167 Pearson Correlation: -0.01037808272030332 Spearman Correlation: -0.038162103785095845 Coefficient of Determination: -0.12165377802458321 RMSE: 0.254570923219871 NRMSE: 0.12835595023489452 MAPE: 313.5540445378717 Predictor: RandomForests Pearson Correlation: 0.3444522944395483 Spearman Correlation: 0.29870867031530557 Coefficient of Determination: 0.07453488746402737 RMSE: 0.22501923799217347 NRMSE: 0.11116288069644924 MAPE: 152.53756640733621 Pearson Correlation: 0.023807699945309423 Spearman Correlation: 0.05166162087229341 Coefficient of Determination: -0.11921901317938954 RMSE: 0.2542944755887337 NRMSE: 0.1282165639376065 MAPE: 338.88012136481944 Protein: CDH1 Protein Interaction Partners Count: 834 x_train_column_count: 823 x_train columns: ['ABCB1', 'ABCG2', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTR3', 'ACVR1B', 'ADAM10', 'ADAM15', 'ADAM17', 'ADAM9', 'AFP', 'AIMP1', 'AJAP1', 'AKAP9', 'AKT1', 'AKT2', 'AKTIP', 'ALB', 'ALCAM', 'ALDH1A1', 'ALDH3A1', 'ALK', 'AMOTL2', 'ANAPC4', 'ANAPC7', 'ANO1', 'ANXA2', 'ANXA5', 'AP1M1', 'AP1M2', 'APC2', 'APC', 'AQP1', 'AQP5', 'AREG', 'ARF6', 'ARHGAP31', 'ARID1A', 'ARL2BP', 'ARMC7', 'ARPC1A', 'ARPC2', 'ARRB2', 'ARVCF', 'AR', 'CLMP', 'ASF1A', 'ATF2', 'ATF3', 'ATM', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BAG3', 'BANP', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL6B', 'BCL9L', 'BCORL1', 'BMI1', 'BMP2', 'BMP4', 'BMP6', 'BMP7', 'BNIP3', 'BRCA1', 'BRCA2', 'BSG', 'BTBD7', 'BTC', 'BTF3', 'ANAPC15', 'CA2', 'CA9', 'CALCA', 'CALR', 'CAPN1', 'CAPNS1', 'CASP3', 'CASP8', 'CASP9', 'CASS4', 'CAV1', 'CBLL1', 'CBL', 'CBX7', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CCR7', 'CD1A', 'CD1B', 'CD1C', 'CD1E', 'CD207', 'CD24', 'CD274', 'CD276', 'CD2AP', 'CD34', 'CD44', 'CD46', 'CD68', 'CD82', 'CDC16', 'CDC23', 'CDC27', 'CDC42', 'CDC6', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH24', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK14', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN3', 'CDX2', 'CEACAM5', 'CFL1', 'CGN', 'CHGA', 'CHL1', 'CLCA2', 'CLDN1', 'CLDN2', 'CLDN3', 'CLDN4', 'CLDN5', 'CLDN7', 'CNTN1', 'COL1A1', 'CORO1C', 'CRB3', 'CREB1', 'CREBBP', 'CRYAB', 'YBX3', 'CSDC2', 'CSE1L', 'CSF2', 'CSNK2A1', 'CSNK2A2', 'CST5', 'CTBP1', 'CTBP2', 'CTCF', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTSL', 'CTTN', 'CXCL12', 'CXCL1', 'CXCR4', 'CYP1B1', 'DAAM1', 'DAB2IP', 'DACH1', 'DAPK1', 'DAP', 'DDR1', 'DDR2', 'DDX3X', 'DICER1', 'DKK1', 'DLC1', 'DLG1', 'DLG5', 'DNM2', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOT1L', 'DPAGT1', 'DPEP1', 'DSP', 'DUOX1', 'DUSP4', 'DVL1', 'DVL2', 'E2F1', 'ECT2', 'EDN1', 'EFEMP1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'EHD1', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'ELAVL1', 'ELF3', 'ENAH', 'ENG', 'EP300', 'EPB41L3', 'EPCAM', 'EPHA10', 'EPHA1', 'EPHA2', 'EPPK1', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ESRP1', 'ESRP2', 'ETS1', 'ETS2', 'EXOC3', 'EXOC4', 'EYA2', 'EZH2', 'EZR', 'F11R', 'F2RL2', 'SUPT20H', 'FBXL5', 'FER', 'FGF10', 'FGF13', 'FGF17', 'FGF19', 'FGF2', 'FGF4', 'FGF5', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FMN1', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC1', 'FOXC2', 'FOXJ2', 'FOXK2', 'FOXL1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXQ1', 'FRMPD2', 'FSCN1', 'FUT4', 'FXYD5', 'FYN', 'FZD1', 'FZD4', 'FZD7', 'FZR1', 'G6PD', 'GAB2', 'GABPA', 'GADD45A', 'GAPDH', 'GAS6', 'GATA1', 'GATA3', 'GATA4', 'GATA6', 'GDNF', 'GFRA1', 'GGT1', 'GJA1', 'GJB1', 'GJB2', 'GKN2', 'GLI1', 'GLI2', 'GMNN', 'GNA12', 'GNA13', 'GNB2L1', 'GNL3', 'GPA33', 'GRB2', 'GRHL2', 'GRHL3', 'GSK3B', 'GSN', 'GSTP1', 'H2AFZ', 'HAVCR2', 'HBEGF', 'HDAC1', 'HDAC2', 'HEPACAM', 'HES1', 'HGF', 'HGS', 'HIF1A', 'HMGA2', 'HNF4A', 'HOXB4', 'HOXD10', 'HPGDS', 'HPGD', 'HRAS', 'HSP90AA1', 'HSPA5', 'ICAM1', 'ID1', 'ID2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP3', 'IL10', 'IL15', 'IL17A', 'IL1B', 'IL24', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IQSEC1', 'IRS1', 'IRS2', 'ITGA5', 'ITGA6', 'ITGAE', 'ITGAM', 'ITGB1', 'ITGB4', 'ITGB7', 'ITPKB', 'IVL', 'JAG1', 'JAK2', 'AJUBA', 'JUN', 'JUP', 'KDM1A', 'KDM6A', 'KDR', 'KEAP1', 'KIFC3', 'KIT', 'KLF4', 'KLF5', 'KLF8', 'KLK3', 'KLK7', 'KLRG1', 'KRAS', 'KRT10', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'KRT9', 'LAMA1', 'LAMB1', 'LAMC2', 'LASP1', 'LATS1', 'LATS2', 'LCN2', 'LEF1', 'LEP', 'LGALS3', 'LGALS4', 'LGALS9', 'LGR5', 'LIF', 'LIMA1', 'LIN28A', 'LIPG', 'LLGL2', 'LMNA', 'LOR', 'LOXL2', 'LOXL3', 'LOX', 'LRP5', 'LRP6', 'LY6K', 'MACC1', 'MACROD1', 'MAD2L2', 'MAGI1', 'MAP2K1', 'MAP2K7', 'MAP4K5', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARK2', 'MARVELD2', 'MCAM', 'MCL1', 'MDM2', 'MED1', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGAT5', 'MGMT', 'MKI67', 'MLH1', 'MLLT4', 'MME', 'MMP11', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP1', 'MMP25', 'MMP27', 'MMP2', 'MMP3', 'MMP7', 'MMP8', 'MMP9', 'MPP5', 'MRAP', 'MSH2', 'MSN', 'MT1G', 'MTA1', 'MTA3', 'MTBP', 'MTDH', 'MTOR', 'MUC1', 'MUC4', 'MYCN', 'MYC', 'MYH6', 'MYO6', 'MYO7A', 'NANOG', 'NCAM1', 'NCOA1', 'NCSTN', 'NDRG1', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEUROG3', 'NF2', 'NFE2L2', 'NFIC', 'NKD2', 'NME1', 'NOG', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NR2F1', 'NRP2', 'NUDT21', 'NUMBL', 'NUMB', 'NUP98', 'NUTF2', 'OTUB1', 'OVOL1', 'OVOL2', 'PARD3', 'PARD6A', 'PAX2', 'PAX5', 'PAX6', 'PAX8', 'PCSK9', 'PDCD4', 'PDGFRB', 'PDPN', 'PEBP1', 'PECAM1', 'PGR', 'PHLPP1', 'PI3', 'PIK3CA', 'PIK3R1', 'PIP5K1A', 'PIP5K1C', 'PIP', 'PIR', 'PITX1', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAUR', 'PLAU', 'PLCD1', 'PLEKHA7', 'PLG', 'PODXL', 'POLR2C', 'POSTN', 'POTEF', 'POU5F1', 'PPARA', 'PPARGC1A', 'PPARG', 'PPL', 'PPP6C', 'PRAME', 'PRDM10', 'PRKAR1A', 'PRKCA', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRKG1', 'PRMT5', 'PROC', 'PROM1', 'PRSS8', 'PSEN1', 'PTCH1', 'PTEN', 'PTF1A', 'PTGS2', 'PTK2', 'PTPN11', 'PTPN14', 'PTPRC', 'PTPRF', 'PTPRJ', 'PTPRM', 'PTPRS', 'PTPRT', 'PTPRU', 'PTRH2', 'PVRL1', 'PVRL2', 'PVR', 'PXN', 'RAB11A', 'RAB25', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RACGAP1', 'RAF1', 'RALA', 'RALBP1', 'RALGDS', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RARB', 'RASSF1', 'RB1', 'RBM4', 'RCOR1', 'RDX', 'REM1', 'RET', 'RHOA', 'RHOB', 'RHOC', 'RHOD', 'RICTOR', 'RND3', 'ROCK1', 'ROCK2', 'RPS6KB1', 'RPTOR', 'RRM2', 'RUNX2', 'RUNX3', 'S100A14', 'S100A4', 'S100A8', 'SATB1', 'SCRIB', 'SDC1', 'SDC4', 'SDHC', 'SELE', 'SELL', 'SELP', 'SEMA3C', 'SEMA3F', 'SENP1', 'SERPINB4', 'SERPINB5', 'SERPINE1', 'SFN', 'SFRP1', 'SFRP2', 'SFTPC', 'SHH', 'SIK1', 'SIN3A', 'SIRT1', 'SIRT2', 'SIRT4', 'SIRT7', 'SIX1', 'SIX2', 'SKIL', 'SKP2', 'SLC2A1', 'SLC39A6', 'SLC6A3', 'SLC9A3R1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SNAI1', 'SNAI2', 'SNAI3', 'SNX16', 'SNX1', 'SOX10', 'SOX17', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPARC', 'SPDEF', 'SPINT1', 'SPP1', 'SPRY1', 'SRCIN1', 'SRC', 'SRXN1', 'ST14', 'ST7L', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STX4', 'STYK1', 'SUCLG2', 'SUMO1', 'SUZ12', 'SYNJ2', 'SYP', 'TACC3', 'TACSTD2', 'TATDN1', 'TBX1', 'TBX3', 'TCF15', 'TCF4', 'TDGF1', 'TERT', 'TET2', 'TFF1', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBI', 'TGFBR1', 'TGFBR2', 'THBS1', 'THEM4', 'THUMPD1', 'THY1', 'TIAM1', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLN1', 'TLR4', 'TMPRSS2', 'TMPRSS4', 'TNFRSF6B', 'TNF', 'TNK2', 'TNS1', 'TP53BP1', 'TP53BP2', 'TP53', 'TRIM21', 'TRIM29', 'TRIM44', 'TRIP10', 'TRPS1', 'TSPYL2', 'TWIST1', 'TWIST2', 'TYRP1', 'T', 'UBE2I', 'UBE2S', 'USP48', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VEZT', 'VHL', 'VIM', 'VIPAS39', 'VPS33B', 'VTN', 'WASL', 'WDFY2', 'WDTC1', 'WIF1', 'WISP1', 'WISP3', 'WNT10A', 'WNT10B', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT9A', 'WNT9B', 'WT1', 'XIAP', 'YAP1', 'YBX1', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.832277278647903 Spearman Correlation: 0.7583598319718478 Coefficient of Determination: 0.6872226966165963 RMSE: 0.62977306252833 NRMSE: 0.10027914119428201 MAPE: 237.68368104838112 Pearson Correlation: 0.07406768769844997 Spearman Correlation: 0.30396426883684124 Coefficient of Determination: -5.6976741363394e+21 RMSE: 87692137413.00311 NRMSE: 17244918961.869602 MAPE: 16914358254968.781 Predictor: ElasticNet Pearson Correlation: 0.7138540360782922 Spearman Correlation: 0.6454460725726416 Coefficient of Determination: 0.4660363087007575 RMSE: 0.8228531353879764 NRMSE: 0.13102339660965834 MAPE: 208.4664649447226 Pearson Correlation: 0.4741250230583756 Spearman Correlation: 0.43897056073018365 Coefficient of Determination: 0.19785909382185962 RMSE: 1.0404882597052956 NRMSE: 0.20461510288987347 MAPE: 1013.5052739067536 Predictor: RandomForests Pearson Correlation: 0.6571734286160561 Spearman Correlation: 0.5598770441961903 Coefficient of Determination: 0.4293470423452177 RMSE: 0.8506531239029163 NRMSE: 0.13545000539838162 MAPE: 173.8788404658064 Pearson Correlation: 0.4513709663297486 Spearman Correlation: 0.5027158056659704 Coefficient of Determination: 0.17099076853205408 RMSE: 1.0577707059320032 NRMSE: 0.2080137472089051 MAPE: 624.7821519584255 Protein: CDH2 Protein Interaction Partners Count: 472 x_train_column_count: 466 x_train columns: ['ABCG2', 'ABL1', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTR3', 'ADAM10', 'ADH1A', 'AFP', 'AHSG', 'AKT1', 'AKT3', 'ALB', 'ALCAM', 'ALDH1A1', 'AMBN', 'AMELX', 'AMOTL1', 'AMTN', 'ANGPT1', 'ANO8', 'ANXA5', 'APC2', 'APC', 'APLP2', 'APOA1', 'APOA2', 'APOA5', 'APOB', 'APOE', 'APOL1', 'APPL1', 'APP', 'ARHGAP32', 'ARMC7', 'ARPC5', 'ARVCF', 'AR', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BCL2L1', 'BDNF', 'BMI1', 'BMP15', 'BMP2', 'BMP4', 'BMP7', 'BNIP2', 'BOC', 'BPIFB2', 'RGCC', 'GSKIP', 'C3', 'C4A', 'CABLES1', 'CADM1', 'CALU', 'CASP3', 'CAV1', 'CBLL1', 'CCNA2', 'CCNB1', 'CCND1', 'CD24', 'CD34', 'CD44', 'CD80', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK4', 'CDK5', 'CDK6', 'CDKN2A', 'CDON', 'CDX2', 'CEBPZ', 'CFL1', 'CHGB', 'CHL1', 'CHRDL1', 'CKAP4', 'CLDN11', 'CLDN3', 'CLDN4', 'CLDN7', 'CORT', 'CP', 'CREBBP', 'CRP', 'CSF1', 'CSK', 'CST3', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTTN', 'CXCL12', 'CXCR4', 'CYLD', 'CYR61', 'DBN1', 'DDR1', 'DDR2', 'DKK1', 'DLG4', 'DLG5', 'DMP1', 'DNAJC3', 'DSP', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EFNB2', 'EFNB3', 'EGFR', 'EGF', 'EHMT2', 'EIF2AK3', 'ENAM', 'ENG', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA4', 'EPHB2', 'EPS8', 'ERBB2', 'ERBB4', 'ESR1', 'ESRP1', 'EXOC4', 'EZH2', 'EZR', 'F11R', 'F5', 'EVA1A', 'FAM20A', 'FAM20C', 'FBN1', 'FER', 'FGA', 'FGF13', 'FGF23', 'FGF2', 'FGFR1', 'FGFR4', 'FGG', 'FN1', 'FOXC2', 'FOXD3', 'FOXO1', 'FOXP4', 'FSTL1', 'FSTL3', 'FUCA2', 'GAA', 'GAPDH', 'GAS6', 'GATA4', 'GFAP', 'GJA10', 'GJA1', 'GJA3', 'GJB6', 'GJC1', 'GJC3', 'GJD3', 'GJD4', 'GLI1', 'GOLM1', 'GPC3', 'GRIA1', 'GRIA2', 'HGF', 'HMGA2', 'HNF4A', 'HRAS', 'HRC', 'HSP90B1', 'HSPA5', 'IARS2', 'IGF1R', 'IGF1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL1B', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'INVS', 'IQGAP1', 'ISL1', 'ITGA6', 'ITGB1', 'ITIH2', 'ITPKB', 'JAG1', 'JAM3', 'JUN', 'JUP', 'KCNA5', 'KDR', 'KIAA2022', 'KIF5B', 'KIT', 'KLF4', 'KNG1', 'KRAS', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT8', 'KTN1', 'L1CAM', 'LAMB1', 'LAMB2', 'LAMC1', 'LEF1', 'LGALS1', 'LRP5', 'LRP6', 'LRRC7', 'LTBP1', 'LTBP3', 'MAP1B', 'MAP2K6', 'MAP2K7', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MATN3', 'MBTPS1', 'MCAM', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEPE', 'MET', 'MFGE8', 'MFI2', 'MGAT4A', 'MIA3', 'MKI67', 'MLLT4', 'MMP14', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MPDZ', 'MPP5', 'MRAP', 'MRPL49', 'MSLN', 'MSN', 'MTHFD1', 'MUC1', 'MUC4', 'MXRA8', 'MYC', 'MYO10', 'MZF1', 'NANOG', 'NCAM1', 'NCSTN', 'NDRG1', 'NENF', 'NES', 'NFASC', 'NGF', 'NLGN1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTUM', 'NRCAM', 'NT5C', 'NT5E', 'NTRK2', 'NUCB1', 'NUMBL', 'NUMB', 'OLFM3', 'P4HB', 'PARD3', 'PAX6', 'PCSK9', 'PC', 'PDGFRB', 'PDIA4', 'PDIA6', 'PECAM1', 'PENK', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PITX2', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PNPLA2', 'POU5F1', 'PPT2', 'PRKCDBP', 'PRKCSH', 'PROC', 'PROM1', 'PRPH', 'PRSS23', 'PSEN1', 'PTEN', 'PTK2', 'PTPN11', 'PTPN1', 'PTPN2', 'PTPRC', 'PTPRS', 'PVRL1', 'PVRL2', 'PVRL3', 'PXN', 'QSOX1', 'RAB11FIP1', 'RAB3D', 'RAB5A', 'RAC1', 'RCN1', 'RELN', 'REM1', 'RHOA', 'RHOB', 'RHOC', 'ROBO1', 'PTBP3', 'RPS6KB1', 'RUNX2', 'S100A14', 'S100A4', 'SARS2', 'SCARB2', 'SCG2', 'SCG3', 'SDC2', 'SEMA3A', 'SENP3', 'SERPINA10', 'SERPINA1', 'SERPINC1', 'SERPIND1', 'SERPINE1', 'SHH', 'SHISA5', 'SIRT7', 'SKP1', 'SLC2A1', 'SLC9A3R1', 'SLIT1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SNAI1', 'SNAI2', 'SNAI3', 'SOX10', 'SOX18', 'SOX1', 'SOX2', 'SOX4', 'SOX9', 'SP7', 'SPAG9', 'SPARCL1', 'SPARC', 'SPP1', 'SPP2', 'SRC', 'ST6GALNAC5', 'STAT3', 'STC2', 'SYP', 'TBX1', 'TCF3', 'TEK', 'TF', 'TGFB1', 'TGFBR1', 'TGM2', 'TGOLN2', 'THY1', 'TIMP1', 'TJP1', 'TJP3', 'TMEM132A', 'TNC', 'TNF', 'TNNT1', 'TP53', 'TRPS1', 'TSC2', 'TWIST1', 'TWIST2', 'USP9X', 'VANGL2', 'VCAM1', 'VCAN', 'VCL', 'VEGFA', 'VGF', 'VIM', 'VTN', 'VWA1', 'WFS1', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7A', 'XIRP1', 'ZBTB16', 'ZEB1', 'ZEB2', 'ZSCAN1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.5701420925632306 Spearman Correlation: 0.5861193892804575 Coefficient of Determination: 0.3181797163723642 RMSE: 0.2965475849424076 NRMSE: 0.14564490199027927 MAPE: 2069.6500157311116 Pearson Correlation: -0.08174216107318669 Spearman Correlation: 0.16327238040725964 Coefficient of Determination: -1.7763742389967113e+24 RMSE: 555902528648.6097 NRMSE: 207880084755.38385 MAPE: 6.64075309926035e+16 Predictor: ElasticNet Pearson Correlation: 0.3556439809177363 Spearman Correlation: 0.3695014776879629 Coefficient of Determination: 0.10999923141823431 RMSE: 0.33880875473570854 NRMSE: 0.1664008421667445 MAPE: 788.3151883031967 Pearson Correlation: 0.15712716299902874 Spearman Correlation: 0.2211108160109052 Coefficient of Determination: 0.011983115785977438 RMSE: 0.414585013883669 NRMSE: 0.15503431515945962 MAPE: 3061.251958202329 Predictor: RandomForests Pearson Correlation: 0.34960126657790397 Spearman Correlation: 0.41657786644271677 Coefficient of Determination: 0.1047075220371605 RMSE: 0.33981449564541877 NRMSE: 0.16689479674152485 MAPE: 546.7648491328747 Pearson Correlation: 0.12227410229705299 Spearman Correlation: 0.21363634663334935 Coefficient of Determination: 0.000490670837750451 RMSE: 0.4169892340353998 NRMSE: 0.1559333747304376 MAPE: 3432.3185868959927 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.41066420314559965 Spearman Correlation: 0.4103804957082043 Coefficient of Determination: 0.16864422535192314 RMSE: 0.1857928481674568 NRMSE: 0.1303480160573166 MAPE: 266.0010345308971 Pearson Correlation: -0.038197322380458816 Spearman Correlation: 0.13986891605854024 Coefficient of Determination: -1.6655334267591667e+18 RMSE: 288299952.31157917 NRMSE: 260106959.02306876 MAPE: 22639144473.61914 Predictor: ElasticNet Pearson Correlation: 0.30084543077940135 Spearman Correlation: 0.33775019195765477 Coefficient of Determination: 0.05657900452969522 RMSE: 0.19791937100390228 NRMSE: 0.13885570733281577 MAPE: 141.24788015224422 Pearson Correlation: 0.26653887035365104 Spearman Correlation: 0.12992811460741777 Coefficient of Determination: 0.03889136163469298 RMSE: 0.21900505250666139 NRMSE: 0.1975884413488586 MAPE: 100.53179897749783 Predictor: RandomForests Pearson Correlation: 0.3329486346614659 Spearman Correlation: 0.38008094362495276 Coefficient of Determination: 0.09813774693669353 RMSE: 0.1935109917094385 NRMSE: 0.1357628891714644 MAPE: 175.58034368764967 Pearson Correlation: 0.3233911411918786 Spearman Correlation: 0.196920138313472 Coefficient of Determination: 0.07998779978500714 RMSE: 0.21427163681049025 NRMSE: 0.1933179086878177 MAPE: 135.71342421556133 Protein: PTEN Protein Interaction Partners Count: 884 x_train_column_count: 875 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ABTB1', 'ACTB', 'ACTG1', 'ADM', 'AEBP1', 'AFP', 'AKT1S1', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'AMHR2', 'ANXA2', 'ANXA5', 'APAF1', 'APC', 'ARAF', 'AREG', 'ARHGAP21', 'ARID1A', 'ARID2', 'ARL2BP', 'AR', 'ATF3', 'ATG12', 'ATG5', 'ATG7', 'ATM', 'ATRX', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'AXL', 'BAD', 'BAG5', 'BARD1', 'BAX', 'BBC3', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BIRC3', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BNIP3', 'BRAF', 'BRCA1', 'BRCA2', 'BRD4', 'BTG2', 'BTK', 'SPRTN', 'CLHC1', 'CA9', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBL', 'CBX7', 'CCL2', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD24', 'CD274', 'CD34', 'CD44', 'CD79A', 'CD79B', 'CDC14A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC7', 'CDH17', 'CDH1', 'CDH2', 'CDIPT', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CENPC', 'CFL1', 'CFLAR', 'CFTR', 'CHD1', 'CHD8', 'CHEK1', 'CHEK2', 'CHKA', 'CHORDC1', 'CHUK', 'CLTCL1', 'CLTC', 'CNOT6L', 'CREB1', 'CREBBP', 'CRP', 'CSF1R', 'CSF1', 'CSK', 'CSN2', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTGF', 'CTLA4', 'CTNNB1', 'CUL1', 'CUL3', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'DAPK1', 'DAXX', 'DBN1', 'DCAF13', 'DDIT4', 'DDR2', 'DECR1', 'DEPTOR', 'DGCR8', 'DICER1', 'DLC1', 'DLG1', 'DLG4', 'DNM1L', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOLPP1', 'DUSP1', 'DUSP6', 'DUT', 'DVL1', 'DYRK1A', 'E2F1', 'E2F2', 'E2F3', 'ECSCR', 'EGFR', 'EGF', 'EGR1', 'EIF2AK2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4EBP2', 'EIF4E', 'EIF4G1', 'EML4', 'ENDOG', 'EP300', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA3', 'EPHA4', 'EPHA5', 'EPHA7', 'EPHB1', 'EPHB2', 'EPHB3', 'EPHB4', 'ERBB2', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ESR1', 'ETS1', 'ETS2', 'ETV1', 'ETV6', 'EYA2', 'EZH2', 'EZR', 'FABP4', 'FASLG', 'FASN', 'FBXW7', 'FCGR1B', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FIG4', 'FKBP1A', 'FLCN', 'FLT1', 'FLT3', 'FLT4', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXG1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FOXP3', 'FRK', 'FYN', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GCK', 'GDF10', 'GDF2', 'GFAP', 'GJA1', 'GLI1', 'GNA11', 'GNAQ', 'GNAS', 'GNRHR', 'GRASP', 'GRB2', 'GRPR', 'GSK3A', 'GSK3B', 'GSTP1', 'H1F0', 'H2AFX', 'HAVCR2', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HES1', 'HGF', 'HIF1A', 'HIST1H2BA', 'HK1', 'HK2', 'HMGA2', 'HNF4A', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA1A', 'HSPA1B', 'HSPA2', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'ID1', 'ID4', 'IDH1', 'IDH2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL17A', 'IL21', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INPP4A', 'INPP4B', 'INPP5A', 'INPP5B', 'INPP5D', 'INPP5E', 'INPP5F', 'INPP5J', 'INPP5K', 'INPPL1', 'INSRR', 'INSR', 'INS', 'IPMK', 'IPO11', 'IQGAP1', 'IRAK1', 'IRS1', 'IRS2', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'ITPR3', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUN', 'KAT2B', 'KDM5B', 'KDM5C', 'KDM6A', 'KDR', 'KEAP1', 'ATG13', 'KIF11', 'KLLN', 'KITLG', 'KIT', 'KLF17', 'KLF2', 'KLF4', 'KLK3', 'KPNA1', 'KPNA2', 'KPNA5', 'KPNA6', 'KPNA7', 'KRAS', 'KRT14', 'KRT5', 'KRT8', 'LASP1', 'LATS1', 'LATS2', 'LCK', 'LDHA', 'LEF1', 'LEP', 'LGALS3', 'LIG4', 'LOX', 'LRIG1', 'LRP1B', 'LRRK2', 'LYN', 'LYPD1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAN2C1', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K3', 'MAP2K4', 'MAP2K7', 'MAP3K1', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK4', 'MAPK6', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAP1', 'MAPT', 'MARCH2', 'MARCH3', 'MAST1', 'MAST2', 'MAST3', 'MAST4', 'MATK', 'MCL1', 'MCM2', 'MCM7', 'MCRS1', 'MDK', 'MDM2', 'MDM4', 'MECOM', 'MECP2', 'MED12', 'MEN1', 'MET', 'MGMT', 'MINPP1', 'MITF', 'MKI67', 'MKRN1', 'MLH1', 'MLH3', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT1', 'MLST8', 'MME', 'MMP2', 'MMP9', 'MOV10', 'MRAP', 'MRE11A', 'MSH2', 'MSH6', 'MTDH', 'MTMR2', 'MTOR', 'MTSS1', 'MUTYH', 'MVP', 'MYCN', 'MYC', 'MYLK', 'MYOCD', 'NANOG', 'NCKAP1', 'NCOA3', 'NCOR2', 'NDFIP1', 'NDFIP2', 'NDRG1', 'NDRG2', 'NEDD4L', 'NEDD4', 'NES', 'NF1', 'NF2', 'NFATC1', 'NFATC4', 'NFE2L2', 'NFKBIA', 'NGFR', 'NLGN3', 'NLGN4X', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR1H4', 'NR3C2', 'NRAS', 'NRP2', 'NTRK1', 'NTRK2', 'NUMB', 'OCRL', 'OLIG2', 'OTUD3', 'PALB2', 'PARD3', 'PARD6A', 'PARD6B', 'PARD6G', 'PARK2', 'PARK7', 'PARP1', 'PAX8', 'PBK', 'PBRM1', 'PCGF2', 'PCSK9', 'PDCD1', 'PDCD4', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PDK1', 'PDK2', 'PDPK1', 'PDZK1', 'PECAM1', 'PGM3', 'PGR', 'PHF6', 'PHLPP1', 'PHLPP2', 'PI3', 'PI4K2A', 'PI4K2B', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIK3R5', 'PIKFYVE', 'PINK1', 'PIP4K2A', 'PIP4K2B', 'PIP4K2C', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PIP5KL1', 'PKM', 'PLCB1', 'PLCB2', 'PLCB3', 'PLCB4', 'PLCD1', 'PLCD3', 'PLCD4', 'PLCE1', 'PLCG1', 'PLCG2', 'PLCH1', 'PLCH2', 'PLCZ1', 'PLEKHA1', 'PLEK', 'PLK1', 'PLK2', 'PLK3', 'BPIFA1', 'PMAIP1', 'PML', 'PMPCA', 'PMS1', 'PMS2', 'POLE', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPM1D', 'PPP2R1A', 'PPP2R4', 'PPP2R5A', 'PPP2R5E', 'PPP3CA', 'PPP6C', 'PRDX1', 'PREX2', 'PRKAA1', 'PRKAA2', 'PRKCI', 'PRKCZ', 'PRKDC', 'PRMT5', 'PROM1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTER', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPMT1', 'PTPN11', 'PTPN12', 'PTPN13', 'PTPN1', 'PTPRC', 'PTPRD', 'PTS', 'PXN', 'RAB7A', 'RAC1', 'RAC2', 'RAD51C', 'RAD51D', 'RAD51', 'RAD52', 'RAF1', 'RASA1', 'RASSF1', 'RB1CC1', 'RB1', 'RBL1', 'RBL2', 'RBM38', 'RBFOX2', 'RCN1', 'RECK', 'RELA', 'REL', 'REM1', 'RETN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'DROSHA', 'RNF146', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KB1', 'RPS6KB2', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'RRM1', 'RSL1D1', 'RUNX3', 'RWDD3', 'SACM1L', 'SALL4', 'SCAI', 'SCGB1D4', 'SCRIB', 'SDHB', 'SDHC', 'SERPINA1', 'SERPINA4', 'SERPINB5', 'SESN1', 'SESN2', 'SETD2', 'SGK1', 'SGK2', 'SGK3', 'SHANK2', 'SHARPIN', 'SHC1', 'SHFM1', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT5', 'SIRT6', 'SIRT7', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC2A4', 'SLC34A2', 'SLC9A3R1', 'SLC9A3R2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNCA', 'SNX27', 'SOCS1', 'SOCS3', 'SOD2', 'SOS1', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPOP', 'SPRY1', 'SPRY2', 'SRBD1', 'SRC', 'SREBF1', 'SRF', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STMN1', 'STUB1', 'STX16', 'SUCLG2', 'SUMO1', 'SYK', 'SYNJ1', 'SYNJ2', 'TACSTD2', 'TBX1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TEP1', 'TERT', 'TET1', 'TGFB1', 'TGFBR1', 'TGFBR2', 'TGM2', 'THBS1', 'TIMP1', 'TIMP3', 'TJP1', 'TLR4', 'TMEM55A', 'TMEM55B', 'TMPRSS2', 'TNFRSF10B', 'TNFSF10', 'TNF', 'TNKS2', 'TNKS', 'TNPO2', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TPM1', 'TRAF6', 'TRIM27', 'TRIM29', 'TSC1', 'TSC2', 'TTN', 'TUT1', 'TWIST1', 'TWSG1', 'TXN', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2E1', 'UBE2I', 'UBE2L3', 'UBE3A', 'ULK1', 'ULK2', 'USP10', 'USP13', 'USP18', 'USP28', 'USP7', 'USP8', 'UTF1', 'UVRAG', 'VCL', 'VDR', 'VEGFA', 'VHL', 'WDR18', 'WDTC1', 'WEE1', 'WIPI1', 'WIPI2', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT9A', 'WNT9B', 'WT1', 'WWP1', 'WWP2', 'XIAP', 'XPO1', 'XPO5', 'YAP1', 'YES1', 'YWHAB', 'YWHAZ', 'YY1', 'ZEB1', 'ZEB2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 0.6835766416573263 Spearman Correlation: 0.6118329192450837 Coefficient of Determination: 0.46536018205858243 RMSE: 0.4160676627597088 NRMSE: 0.06505631502770835 MAPE: 441.9292586935474 Pearson Correlation: 0.13742071594355929 Spearman Correlation: 0.21563913674585877 Coefficient of Determination: -2.615153223206417e+21 RMSE: 36906937159.29142 NRMSE: 7139224922.487508 MAPE: 1625273587843.5378 Predictor: ElasticNet Pearson Correlation: 0.44759760570646717 Spearman Correlation: 0.4156356227697277 Coefficient of Determination: 0.15756583052528095 RMSE: 0.5222774800296892 NRMSE: 0.08166327574539742 MAPE: 381.72867446853337 Pearson Correlation: 0.268682718105754 Spearman Correlation: 0.2845197571042033 Coefficient of Determination: 0.05934962043230341 RMSE: 0.699960532968304 NRMSE: 0.1353993602925379 MAPE: 575.2466412589852 Predictor: RandomForests Pearson Correlation: 0.4842810565467853 Spearman Correlation: 0.37739764149565747 Coefficient of Determination: 0.14696750028804018 RMSE: 0.5255524947477195 NRMSE: 0.08217535685211781 MAPE: 351.0743340669228 Pearson Correlation: 0.18356912532417738 Spearman Correlation: 0.3073232108562696 Coefficient of Determination: 0.021568323343055473 RMSE: 0.7138791335779253 NRMSE: 0.13809175440612917 MAPE: 454.04148074701334 Protein: BRCA2 Protein Interaction Partners Count: 361 x_train_column_count: 351 x_train columns: ['ABL1', 'ACHE', 'ADRB1', 'ADRB2', 'AKT1', 'ALK', 'APEX1', 'ARID1A', 'ARPC1A', 'AR', 'ATAD5', 'ATM', 'ATRIP', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'B3GALTL', 'BACH1', 'BARD1', 'BCCIP', 'BCHE', 'BDNF', 'BECN1', 'BIRC5', 'BLM', 'BMI1', 'BRCA1', 'BRCC3', 'BRE', 'BRIP1', 'SLX4', 'BUB1B', 'BUB1', 'BUB3', 'SFR1', 'RHNO1', 'RMI2', 'BABAM1', 'MMS22L', 'CASC1', 'CASC5', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCNE1', 'CDC25A', 'CDC25C', 'CDC45', 'CDC6', 'CDH1', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CENPE', 'CENPF', 'CEP55', 'CHEK1', 'CHEK2', 'CHRNA1', 'CLSPN', 'CNTROB', 'CREM', 'CSMD3', 'CTNNB1', 'CYP19A1', 'DMC1', 'DNA2', 'DSN1', 'DYNC1LI2', 'EGFR', 'EGF', 'ELAC2', 'EME1', 'EME2', 'ENAM', 'EPCAM', 'ERBB2', 'ERBB3', 'ERCC1', 'ERCC2', 'ERCC4', 'ERCC5', 'ERCC6', 'ERCC8', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM175A', 'FANCA', 'FANCB', 'FANCC', 'FANCD2', 'FANCE', 'FANCF', 'FANCG', 'FANCI', 'FANCL', 'FANCM', 'FBN1', 'FBXO18', 'FBXW7', 'FEN1', 'FGFR2', 'FHIT', 'FLNA', 'FOXM1', 'GAPDH', 'GEN1', 'SLX1B', 'H2AFX', 'HELQ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HMG20A', 'HMG20B', 'HMMR', 'HNRNPC', 'HOXB13', 'HRAS', 'HUS1', 'ITPKB', 'KAT2B', 'KAT5', 'KEAP1', 'SPIDR', 'KIF23', 'KIF4A', 'KIT', 'KLK3', 'KRAS', 'KRT5', 'LIG1', 'LIG3', 'LIG4', 'LIMD1', 'LSP1', 'MAD2L2', 'MAGED1', 'MAMSTR', 'MAP2K2', 'MAP3K1', 'MCM10', 'MCPH1', 'MDC1', 'MDM2', 'MDM4', 'MEN1', 'MGMT', 'MKI67', 'MLH1', 'MLH3', 'KMT2C', 'MND1', 'MORF4L1', 'MRE11A', 'MRPL36', 'MSH2', 'MSH3', 'MSH4', 'MSH5', 'MSH6', 'MTA2', 'FAN1', 'MUC1', 'MUS81', 'MUTYH', 'MYC', 'NBN', 'NCAPG', 'NEDD4', 'NF1', 'NHEJ1', 'NNT', 'NOTCH1', 'NSL1', 'NSMCE4A', 'OBFC1', 'OGG1', 'PALB2', 'PARG', 'PARP1', 'PARP2', 'PARP3', 'PAXIP1', 'PCNA', 'PDLIM7', 'PDS5A', 'PDS5B', 'PGR', 'PIK3CA', 'PLCB4', 'PLEC', 'PLEKHH1', 'PLK1', 'PMS1', 'PMS2', 'PNOC', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'POLN', 'POLQ', 'PRDM9', 'PRKDC', 'PRSS1', 'PSMC3IP', 'PSMD3', 'PSMD6', 'PTEN', 'RAD17', 'RAD18', 'RAD1', 'RAD21', 'RAD23B', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD52', 'RAD54B', 'RAD54L', 'RAD9A', 'RAD9B', 'RAG2', 'RASSF1', 'RBBP8', 'RBMX', 'RECQL4', 'RECQL5', 'RECQL', 'RET', 'REV1', 'REV3L', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RNF168', 'RNF8', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SKP2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCAL1', 'SMARCB1', 'SMC1A', 'SMC2', 'SMC3', 'SMC4', 'SMC5', 'SMC6', 'SMUG1', 'SNAI2', 'SP1', 'SPO11', 'STAT5A', 'STK11', 'STRA13', 'SUV39H1', 'SYCP3', 'TBCE', 'TDP1', 'TERT', 'TEX15', 'TMPRSS2', 'TNS1', 'TOP1', 'TOP2A', 'TOP3A', 'TOP3B', 'TOPBP1', 'TOX3', 'TP53BP1', 'TP53', 'TPX2', 'TRIP12', 'PRSS58', 'TTK', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2D1', 'UBE2E2', 'UBE2E3', 'UBE2N', 'UBE2T', 'UIMC1', 'USF1', 'USP11', 'USP15', 'USP1', 'USP21', 'USP4', 'UVRAG', 'VEGFA', 'VWF', 'WDR48', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WTIP', 'XPA', 'XPO1', 'XRCC1', 'XRCC2', 'XRCC3', 'XRCC4', 'XRCC5', 'XRCC6', 'ZFYVE26', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.2608300114281889 Spearman Correlation: 0.3052247508909598 Coefficient of Determination: -0.33063338727296343 RMSE: 0.2312462511059889 NRMSE: 0.14897487589369554 MAPE: 362.34951912030874 Pearson Correlation: -0.015885399344330232 Spearman Correlation: 0.1543886424227027 Coefficient of Determination: -9.63389904204118e+25 RMSE: 1630189668853.7253 NRMSE: 2131942285821.9124 MAPE: 429276416564471.56 Predictor: ElasticNet Pearson Correlation: 0.27868900008637637 Spearman Correlation: 0.2518090747602963 Coefficient of Determination: 0.051332188846922144 RMSE: 0.19525518490585841 NRMSE: 0.12578849083965754 MAPE: 144.46315378072967 Pearson Correlation: 0.14143994343411057 Spearman Correlation: 0.14961413831828171 Coefficient of Determination: -0.06910360091006207 RMSE: 0.17173032319486167 NRMSE: 0.2245868347542819 MAPE: 133.62489266077822 Predictor: RandomForests Pearson Correlation: 0.348511327382263 Spearman Correlation: 0.3104692213003777 Coefficient of Determination: 0.08929808941363948 RMSE: 0.19130821367815967 NRMSE: 0.12324574886658701 MAPE: 140.09468485155796 Pearson Correlation: 0.1667006876178724 Spearman Correlation: 0.12855883479316568 Coefficient of Determination: -0.056144668004230125 RMSE: 0.170686351995956 NRMSE: 0.22322154187661805 MAPE: 149.26092733840832 Protein: CDKN2A Protein Interaction Partners Count: 612 x_train_column_count: 604 x_train columns: ['ABCC1', 'ABL1', 'ACAP1', 'ACAP2', 'ACP5', 'ACTA1', 'ACTB', 'ACTG1', 'ADAMTS9', 'ADAP1', 'AFP', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD12', 'ANXA5', 'AP3D1', 'AP3S1', 'AP3S2', 'APAF1', 'APBA1', 'APBA2', 'ARAP1', 'ARAP2', 'ARF1', 'ARF3', 'ARF4', 'ARF5', 'ARF6', 'ARFGAP1', 'ARFGAP3', 'ARFIP2', 'ARFRP1', 'ARID1A', 'ARID2', 'ARID5B', 'ARL10', 'ARL1', 'ARL2', 'ARL3', 'ARL4A', 'ARL5A', 'AR', 'ASAP1', 'ATM', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'AXIN1', 'BAP1', 'BCL2L11', 'BCL2L1', 'BCL6', 'BECN1', 'BIRC5', 'BMI1', 'BRAF', 'BRCA1', 'BRCA2', 'BUB1B', 'RGCC', 'C1QBP', 'RABL6', 'CACNA1G', 'CADM1', 'CAMK1D', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNL1', 'CD274', 'CD34', 'CD44', 'CDC123', 'CDC20', 'CDC25A', 'CDC25C', 'CDC42', 'CDC45', 'CDC5L', 'CDC6', 'CDC7', 'CDH13', 'CDH17', 'CDH1', 'CDH2', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5RAP3', 'CDK6', 'CDK7', 'CDKAL1', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDX2', 'CEACAM5', 'CEBPB', 'CEBPE', 'CHEK1', 'CHEK2', 'CHFR', 'CHKA', 'COMMD1', 'CRABP1', 'CREBBP', 'CSF1R', 'CSF1', 'CSF2', 'CTBP1', 'CTBP2', 'CTCF', 'CTLA4', 'CTNNB1', 'CTSK', 'CUL1', 'CUL3', 'CXCR4', 'CYCS', 'CYLD', 'CYTH1', 'CYTH2', 'CYTH3', 'DAB2IP', 'DAP', 'DAXX', 'DICER1', 'DIRAS3', 'DLEC1', 'DMTF1', 'DNAH3', 'DNMT1', 'DNMT3A', 'DNMT3B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EBF1', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EP300', 'EPCAM', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ETS1', 'ETV6', 'EWSR1', 'EZH1', 'EZH2', 'FAT1', 'FBXW7', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FKBP2', 'FLT3', 'FMN2', 'FN1', 'FOS', 'FOXA1', 'FOXM1', 'FOXN2', 'FOXO1', 'FOXO3', 'FTO', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GATA4', 'GATA5', 'GBF1', 'GDF15', 'GGA1', 'GGA2', 'GGA3', 'GIT1', 'GIT2', 'GLI1', 'GLTSCR2', 'GMNN', 'GNA11', 'GNAQ', 'GNAS', 'GNL3', 'GOLPH3', 'GP5', 'GSPT1', 'GSTP1', 'H2AFX', 'H2AFZ', 'H3F3A', 'H3F3B', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC9', 'HELLS', 'HGF', 'HHEX', 'HIC1', 'HIF1A', 'HIST1H2BA', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AA3', 'HIST2H2AC', 'HIST2H4A', 'HIST4H4', 'HLTF', 'HMGA2', 'HNF4A', 'HNRNPD', 'HOPX', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA4', 'HSPA9', 'HUWE1', 'ID1', 'IDH1', 'IDH2', 'IGF1R', 'IGF1', 'IGF2BP2', 'IGF2R', 'IGF2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING4', 'INS', 'IQSEC1', 'IRS1', 'ISOC2', 'ITGAM', 'JAK1', 'JAK2', 'JAK3', 'JAZF1', 'JUNB', 'JUN', 'KAT2B', 'KAT5', 'KCNJ11', 'KCNQ1', 'KDM1A', 'KDM2B', 'KDM6A', 'KDM6B', 'KDR', 'KEAP1', 'KIAA1549', 'KIT', 'KLF4', 'KRAS', 'KRT19', 'KRT20', 'KRT5', 'KRT7', 'LATS2', 'LOX', 'LRRK2', 'MACROD2', 'MAF', 'MAP2K1', 'MAP2K4', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MAX', 'MC1R', 'MCL1', 'MCM10', 'MCM2', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEN1', 'MEOX1', 'MEOX2', 'MET', 'MGMT', 'MITF', 'MKRN1', 'MLANA', 'MLH1', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT3', 'MME', 'MMP2', 'MMP7', 'MMP9', 'MOV10', 'MRAS', 'MSH2', 'MSH6', 'MTA1', 'MTAP', 'MTHFR', 'MTNR1B', 'MTOR', 'MUC1', 'MYBL2', 'MYCL', 'MYCN', 'MYC', 'MYOD1', 'KAT6A', 'NANOG', 'NCAM1', 'NCL', 'NCOR1', 'NES', 'NEUROG1', 'NF1', 'NF2', 'NFATC1', 'NFE2L2', 'NME1', 'NOTCH1', 'NOTCH2', 'NPM1', 'NRAS', 'NSUN2', 'ORC4', 'ORC5', 'OSBP2', 'P2RY8', 'PA2G4', 'PALB2', 'PARP1', 'PAX3', 'PAX5', 'PAX8', 'PBRM1', 'PCGF2', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PEX19', 'PGR', 'PHLDB1', 'PI3', 'PIAS2', 'PIGF', 'PIK3CA', 'PIK3R1', 'PIP4K2A', 'PLEKHA3', 'PLEKHA8', 'PLEK', 'PLK1', 'PMAIP1', 'PML', 'PMS2', 'POTEF', 'POU5F1', 'PPARA', 'PPARG', 'PPM1D', 'PPP1R9B', 'PPP3CA', 'PRDM2', 'PRMT6', 'PROM1', 'PRSS1', 'PSMC3', 'PSMD10', 'PSME3', 'PTCH1', 'PTEN', 'PTER', 'PTF1A', 'PTGS2', 'PTPN11', 'PTPRC', 'PTPRD', 'PXN', 'RAB11A', 'RAB5A', 'RABEP1', 'RABGEF1', 'RAC2', 'RAD51', 'RAF1', 'RAP2B', 'RARB', 'RASSF1', 'RASSF2', 'RB1', 'RBL1', 'RBL2', 'RCC1', 'RELA', 'RELB', 'REL', 'RET', 'RHOA', 'DROSHA', 'RNF2', 'RNF43', 'ROS1', 'RPL11', 'RPRM', 'RPS27A', 'RPS6KB1', 'RRAS2', 'RRAS', 'RTEL1', 'RUNX2', 'RUNX3', 'SDHC', 'SENP1', 'SENP3', 'SERPINE1', 'SERTAD1', 'SETD2', 'SFN', 'SFRP1', 'SFRP2', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SIX2', 'SKP2', 'SLC30A8', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SNAI1', 'SNAI2', 'SNCA', 'SOCS1', 'SOX2', 'SP1', 'SPEN', 'SRC', 'STAT1', 'STAT3', 'STK11', 'STK25', 'STK33', 'STMN1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUV39H1', 'SUZ12', 'SYNE1', 'SYP', 'TBL1XR1', 'TBRG1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TERT', 'TET2', 'TFDP1', 'TFPI2', 'TGFBR2', 'THADA', 'THBS1', 'TIMP3', 'TMCO1', 'TMEM115', 'TNFRSF10B', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TRADD', 'TRIM28', 'TRIP12', 'PRSS58', 'TSC2', 'TSPAN8', 'TTF1', 'TWIST1', 'TWSG1', 'TYR', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2I', 'UBE3A', 'UCHL1', 'USP7', 'UTF1', 'VEGFA', 'VHL', 'WDTC1', 'WEE1', 'WFS1', 'WHSC1', 'WIF1', 'WRN', 'WT1', 'WWOX', 'XRCC1', 'YY1', 'ZBTB17', 'ZBTB7A', 'ZEB1', 'ZFP91', 'ZNF148', 'ZNF217', 'ZNF227', 'ZNF410', 'ZNF420', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 0.5469022247404457 Spearman Correlation: 0.4979496038768838 Coefficient of Determination: -0.8963286581203764 RMSE: 0.9359789143488143 NRMSE: 0.2383384467797648 MAPE: 856.422065595246 Pearson Correlation: 0.04575096893470609 Spearman Correlation: 0.06244271578084919 Coefficient of Determination: -4.584629110093967e+24 RMSE: 1297443695886.2874 NRMSE: 326474848616.3628 MAPE: 453560808687383.2 Predictor: ElasticNet Pearson Correlation: 0.5482091618366074 Spearman Correlation: 0.44648878032845724 Coefficient of Determination: 0.2749647412488666 RMSE: 0.5787470954304923 NRMSE: 0.14737264022573715 MAPE: 169.045912872757 Pearson Correlation: 0.30343481154881774 Spearman Correlation: 0.23091809124802057 Coefficient of Determination: 0.07486576405903111 RMSE: 0.58282583273379 NRMSE: 0.1466560561469993 MAPE: 265.19085441478023 Predictor: RandomForests Pearson Correlation: 0.5100950001151073 Spearman Correlation: 0.39526747631224096 Coefficient of Determination: 0.22583273749439314 RMSE: 0.5980350829156897 NRMSE: 0.15228414935084153 MAPE: 213.70217834909118 Pearson Correlation: 0.2671302445260068 Spearman Correlation: 0.23604959077382506 Coefficient of Determination: 0.057314460734866124 RMSE: 0.5883284347046965 NRMSE: 0.14804067202755253 MAPE: 197.62331830005536 Protein: TP53 Protein Interaction Partners Count: 1000 x_train_column_count: 990 x_train columns: ['ABCB1', 'ABCC1', 'ABL1', 'ACTB', 'ACTL6A', 'ADAM17', 'AFP', 'AGT', 'AICDA', 'AIFM2', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD2', 'ANXA1', 'ANXA2', 'ANXA5', 'APAF1', 'APBB1', 'APC', 'APEX1', 'APOBEC3B', 'APP', 'ARID1A', 'ARID3A', 'AR', 'ASF1A', 'ASXL1', 'ATF2', 'ATF3', 'ATG7', 'ATM', 'ATN1', 'ATRIP', 'ATRX', 'ATR', 'ATXN3', 'AURKA', 'AURKB', 'AXIN1', 'AXL', 'BACE1', 'BAG1', 'BAG2', 'BAIAP2L1', 'BAK1', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2A1', 'BCL2L11', 'BCL2L12', 'BCL2L14', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BID', 'BIRC3', 'BIRC5', 'BIRC6', 'BLM', 'BMF', 'BMI1', 'BMX', 'BNIP3L', 'BNIP3', 'BRCA1', 'BRCA2', 'BRCC3', 'BRD1', 'BRD4', 'BRD7', 'BRE', 'BRIP1', 'BRPF1', 'BRPF3', 'BTG2', 'BTK', 'BUB1B', 'BUB1', 'RHNO1', 'RGCC', 'RMI2', 'CNOT11', 'SETD9', 'CA9', 'CABIN1', 'CABLES1', 'CAPN1', 'CARM1', 'CASP10', 'CASP1', 'CASP2', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBX2', 'CBX4', 'CBX6', 'CBX8', 'CCDC106', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNG2', 'CCNH', 'CCNK', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CD24', 'CD274', 'CD34', 'CD40LG', 'CD40', 'CD44', 'CD82', 'CDC20', 'CDC25A', 'CDC25C', 'CDH17', 'CDH1', 'CDK12', 'CDK13', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CEACAM5', 'CEBPB', 'CENPJ', 'CFL1', 'CFLAR', 'CHD3', 'CHD4', 'CHD8', 'CHEK1', 'CHEK2', 'CHUK', 'CISH', 'CITED2', 'CLSPN', 'CLU', 'CNOT10', 'CNOT1', 'CNOT2', 'CNOT3', 'CNOT4', 'CNOT6L', 'CNOT6', 'CNOT7', 'CNOT8', 'COPS5', 'CREB1', 'CREBBP', 'CRYAB', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK1G1', 'CSNK1G2', 'CSNK1G3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTCF', 'CTGF', 'CTNNB1', 'CUL4A', 'CUL7', 'CUL9', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP1A1', 'DACH1', 'DAPK1', 'DAP', 'DAXX', 'DDB1', 'DDB2', 'DDIT4', 'DDX17', 'DDX3X', 'DDX5', 'DECR1', 'DGCR8', 'DHCR24', 'DHFR', 'DIABLO', 'DICER1', 'DKK1', 'DMTF1', 'DNA2', 'DNAJA3', 'DNAJB1', 'DNMT1', 'DNMT3A', 'DNTT', 'DPYD', 'DRAM1', 'DTL', 'DUSP1', 'DUSP2', 'DYRK1A', 'DYRK2', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EEF1A1', 'EEF1A2', 'EGFR', 'EGF', 'EGR1', 'EHMT1', 'EHMT2', 'EI24', 'EIF2AK2', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4EBP1', 'ELANE', 'ELAVL1', 'ELL3', 'ELL', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHA3', 'EPHB2', 'ERBB2', 'ERBB4', 'ERCC1', 'ERCC2', 'ERCC3', 'ERCC6', 'ESR1', 'ETS1', 'ETS2', 'EWSR1', 'EXO1', 'EZH2', 'F2', 'FADD', 'AMER1', 'FAM175B', 'FANCC', 'FANCD2', 'FASLG', 'FAS', 'FBL', 'FBXO11', 'FBXO4', 'FBXW7', 'FGF1', 'FGF2', 'FGFR3', 'FHIT', 'FHL2', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FSCN1', 'FUT4', 'FZR1', 'G3BP1', 'G6PD', 'GADD45A', 'GADD45B', 'GADD45G', 'GAPDH', 'GATAD2A', 'GATAD2B', 'GDF15', 'GFI1', 'GLS2', 'GLTSCR2', 'GNL3', 'GRAMD4', 'GRB10', 'GRB14', 'GSK3B', 'GSTP1', 'GTF2H1', 'GTSE1', 'H1F0', 'H2AFX', 'HAMP', 'HCK', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC5', 'HDAC7', 'HDAC8', 'HDAC9', 'HERC5', 'HIC1', 'HIF1A', 'HIPK1', 'HIPK2', 'HIPK3', 'HIPK4', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HK2', 'HMGA1', 'HMGA2', 'HMGB1', 'HMGB2', 'HMMR', 'HMOX1', 'HNF4A', 'HNRNPK', 'HNRNPL', 'HOXA5', 'HPGDS', 'HRAS', 'HSF1', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA1A', 'HSPA1B', 'HSPA1L', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'HSPB1', 'HSPB2', 'HTT', 'HUS1', 'HUWE1', 'ICAM1', 'ID2', 'ID4', 'IDH1', 'IDH2', 'IFI16', 'IFNAR1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IGFBP7', 'IKBKB', 'IL17A', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING2', 'ING3', 'ING4', 'ING5', 'INSIG1', 'INS', 'IRF1', 'ISG15', 'ITPKB', 'JAG1', 'JAK2', 'JMY', 'JUN', 'KAT2A', 'KAT2B', 'KAT5', 'KDM1A', 'KDM6A', 'KDM6B', 'KDR', 'KHDRBS1', 'CCAR2', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KPNA2', 'KRAS', 'KRT14', 'KRT17', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'L3MBTL1', 'LAMA4', 'LEP', 'LGALS7B', 'LGALS7', 'LIF', 'LIG4', 'LIN28A', 'PIDD1', 'LRRK2', 'LYN', 'MAF1', 'MAF', 'MAGEA2', 'MAP1LC3B', 'MAP2K1', 'MAP2K3', 'MAP2K7', 'MAP3K1', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MBD3', 'MCL1', 'MCM7', 'MDC1', 'MDH1', 'MDM2', 'MDM4', 'MEAF6', 'MECOM', 'MELK', 'MET', 'MGMT', 'MIF', 'MKI67', 'MKRN1', 'MLH1', 'KMT2D', 'KMT2C', 'MMP13', 'MMP1', 'MMP2', 'MMP9', 'MOV10', 'MRE11A', 'MSH2', 'MSH6', 'MSX1', 'MT1A', 'MT2A', 'MTA1', 'MTA2', 'MTA3', 'MTOR', 'MUC1', 'MUTYH', 'MYBBP1A', 'MYB', 'MYCN', 'MYC', 'MYOCD', 'KAT8', 'KAT6A', 'NANOG', 'NBN', 'NCL', 'NCOA3', 'NCOR1', 'NCOR2', 'NDN', 'NDRG1', 'NEDD8', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFE2L2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NFKBIB', 'NFYA', 'NFYB', 'NFYC', 'NGFR', 'NLK', 'NLRC4', 'NME1', 'NOC2L', 'NOS3', 'NOTCH1', 'NOTCH3', 'NOTCH4', 'NOX4', 'NPM1', 'NQO1', 'NR1I2', 'NR2E1', 'NR3C1', 'NR4A1', 'NR4A2', 'NRAS', 'NUAK1', 'NUMB', 'NUPR1', 'OGG1', 'OLIG2', 'OPN1SW', 'OSGIN1', 'OTUB1', 'OTUB2', 'OTUD5', 'PADI4', 'PALB2', 'PARK2', 'PARK7', 'PARP1', 'PATZ1', 'PAX2', 'PAX3', 'PAX8', 'PBK', 'PBRM1', 'PCBP4', 'PCNA', 'PDCD4', 'PDCD5', 'PDGFRA', 'PDGFRB', 'PDLIM7', 'PER2', 'PERP', 'PGR', 'PHB', 'PHC1', 'PHC2', 'PHC3', 'PHF20', 'PHGDH', 'PI3', 'PIAS1', 'PIAS2', 'PIAS4', 'PIK3CA', 'PIN1', 'PKM', 'PLAGL1', 'PLAU', 'PLK1', 'PLK2', 'PLK3', 'PLK4', 'PMAIP1', 'PML', 'PMS2', 'POLI', 'POLK', 'POU4F1', 'POU4F2', 'POU5F1', 'PPARGC1A', 'PPARG', 'PPIF', 'PPM1D', 'PPP1R13B', 'PPP1R13L', 'PPP1R15A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R4', 'PPP2R5C', 'PRDM1', 'PRDM2', 'PRDX1', 'PRELID1', 'PRIMA1', 'PRKAA1', 'PRKAA2', 'PRKAB1', 'PRKAB2', 'PRKAG1', 'PRKAG2', 'PRKAG3', 'PRKCA', 'PRKCD', 'PRKCZ', 'PRKD1', 'PRKDC', 'PRKG1', 'PRMT1', 'PRMT5', 'PROM1', 'PSEN1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTBP1', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2', 'PTTG1', 'RABGGTA', 'RABGGTB', 'RAD17', 'RAD1', 'RAD50', 'RAD51', 'RAD9A', 'RAD9B', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP4', 'RBBP6', 'RBBP7', 'RBBP8', 'RBL1', 'RBL2', 'RBM38', 'RBPJ', 'RCHY1', 'RCOR1', 'RECQL4', 'RELA', 'REM1', 'REST', 'RET', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RFFL', 'RFWD2', 'RING1', 'RMI1', 'DROSHA', 'RNF20', 'RNF2', 'RNF34', 'RNF43', 'ROCK1', 'RPA1', 'RPA2', 'RPA3', 'RPL11', 'RPL22', 'RPL26', 'RPL5', 'RPRM', 'RPS14', 'RPS19', 'RPS27A', 'RPS27L', 'RPS3', 'RPS6KB1', 'RQCD1', 'RRAD', 'RRM2B', 'RRM2', 'RUNX2', 'RUNX3', 'S100A2', 'S100A4', 'S100A6', 'S100B', 'SALL4', 'SCO2', 'SDHC', 'SENP1', 'SENP3', 'SERPINB5', 'SERPINE1', 'SESN1', 'SESN2', 'SESN3', 'SETD2', 'SETD7', 'SETD8', 'SETDB1', 'SFN', 'SRSF1', 'SGK1', 'SHFM1', 'SHH', 'SHISA5', 'SIK1', 'SIN3A', 'SIN3B', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SKP2', 'SLC2A14', 'SLC2A1', 'SLC2A2', 'SLC2A3', 'SLC6A6', 'SLMO1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMG1', 'SMG7', 'SMYD2', 'SNAI1', 'SNAI2', 'SOCS1', 'SOCS3', 'SOD2', 'SORT1', 'SOX2', 'SOX4', 'SP100', 'SP1', 'SP3', 'SP7', 'SPATA18', 'SPP1', 'SQSTM1', 'SRC', 'SREBF1', 'SREBF2', 'SSRP1', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STEAP3', 'STK11', 'STMN1', 'STUB1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUMO4', 'SUPT16H', 'SUV39H1', 'SUZ12', 'SYK', 'SYP', 'TADA3', 'TAF10', 'TAF11', 'TAF12', 'TAF13', 'TAF15', 'TAF1L', 'TAF1', 'TAF2', 'TAF3', 'TAF4B', 'TAF4', 'TAF5', 'TAF6', 'TAF7L', 'TAF7', 'TAF9B', 'TBPL1', 'TBPL2', 'TBP', 'TCHP', 'TCP1', 'TDG', 'TERT', 'TET2', 'TFAM', 'TFAP2A', 'TFAP2C', 'TFDP1', 'TFF1', 'TGFB1', 'TGM2', 'THBS1', 'TIMP3', 'TLR3', 'TLR9', 'TMEM219', 'TNFAIP3', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF10C', 'TNFRSF10D', 'TNF', 'TNK2', 'TNKS1BP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOE1', 'TOP1', 'TOP2A', 'TOP3A', 'TOPBP1', 'TOPORS', 'TP53AIP1', 'TP53BP1', 'TP53BP2', 'TP53I3', 'TP53INP1', 'TP53RK', 'TP63', 'TP73', 'TPT1', 'TPX2', 'TRAF6', 'TRIAP1', 'TRIM24', 'TRIM28', 'TRIM29', 'TRIM32', 'TRIM59', 'TRIM8', 'TRRAP', 'TSC2', 'TTC5', 'TTK', 'TWIST1', 'TWIST2', 'TXN', 'TYMS', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2D1', 'UBE2E1', 'UBE2I', 'UBE2K', 'UBE2N', 'UBE2Q1', 'UBE2S', 'UBE3A', 'UBN1', 'UCHL1', 'UHRF1', 'USF1', 'USP10', 'USP15', 'USP24', 'USP3', 'USP42', 'USP7', 'UTP14A', 'VEGFA', 'VHL', 'VPRBP', 'VRK1', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WWOX', 'XAF1', 'XIAP', 'XPA', 'XPO1', 'XRCC1', 'XRCC5', 'XRCC6', 'YBX1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'YY1', 'YY2', 'ZBTB33', 'ZBTB7A', 'ZEB1', 'ZEB2', 'ZKSCAN4', 'ZNF148', 'ZNF274', 'ZNF385A', 'ZNF420', 'ZNF668', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.6799978562931812 Spearman Correlation: 0.6212497615436273 Coefficient of Determination: 0.4623968970523793 RMSE: 0.3107310088665046 NRMSE: 0.07902820744843578 MAPE: 634.5774190593237 Pearson Correlation: -0.11953889454277104 Spearman Correlation: 0.20192521103754413 Coefficient of Determination: -4.9963734426203245e+17 RMSE: 373320009.63169026 NRMSE: 99991967.22423738 MAPE: 12878362499.774446 Predictor: ElasticNet Pearson Correlation: 0.5107567958210945 Spearman Correlation: 0.4932411221064986 Coefficient of Determination: 0.24070376266830107 RMSE: 0.3692830172656479 NRMSE: 0.09391973785336552 MAPE: 793.7370152181351 Pearson Correlation: 0.44528652704820776 Spearman Correlation: 0.4361725208543748 Coefficient of Determination: 0.16943203956274389 RMSE: 0.4813283140395641 NRMSE: 0.1289214715520461 MAPE: 157.09127554749057 Predictor: RandomForests Pearson Correlation: 0.48330521158514106 Spearman Correlation: 0.49668007320802077 Coefficient of Determination: 0.22433169684721954 RMSE: 0.3732430538534221 NRMSE: 0.09492689383082534 MAPE: 836.6486318530358 Pearson Correlation: 0.4084089458408023 Spearman Correlation: 0.40586133022154536 Coefficient of Determination: 0.15361413114242428 RMSE: 0.4858900711653161 NRMSE: 0.13014331623552058 MAPE: 199.86506541759738 Protein: CTNNB1 Protein Interaction Partners Count: 992 x_train_column_count: 983 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACAN', 'ACP1', 'ACTA1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTN4', 'ACVR1B', 'ACVR1', 'ADAM10', 'ADCY7', 'ADIPOQ', 'AES', 'AFP', 'AHI1', 'AHR', 'AHSA1', 'AJAP1', 'AK9', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'ALPL', 'AMHR2', 'AMH', 'ANXA5', 'AP1M1', 'APC2', 'APCS', 'APC', 'APH1A', 'APH1B', 'AQP1', 'ARHGAP10', 'ARHGAP21', 'ARHGAP32', 'ARHGEF4', 'ARID1A', 'ARID2', 'ARMC7', 'ARMC8', 'ARVCF', 'ARX', 'AR', 'ASCL1', 'ASF1A', 'ASH2L', 'ASIP', 'ATF4', 'ATM', 'AURKA', 'AXIN1', 'AXIN2', 'BAG3', 'BCAR1', 'BCL2L1', 'BCL3', 'BCL6', 'BCL9L', 'BCL9', 'BDNF', 'BGLAP', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BMPR1B', 'BNIP2', 'BRAF', 'BRCA1', 'BRCA2', 'BRMS1L', 'BTRC', 'HILPDA', 'AK8', 'CA2', 'CA9', 'CABLES1', 'CACYBP', 'CALM1', 'CALM3', 'CARM1', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBLL1', 'CBL', 'CBY1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CD24', 'CD34', 'CD40', 'CD44', 'CDC27', 'CDC42', 'CDC73', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH16', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH26', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDHR5', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK8', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDON', 'CDX1', 'CDX2', 'CEBPA', 'CHD8', 'CHRD', 'CHUK', 'CITED1', 'CKAP5', 'CLCA1', 'CLDN3', 'CLDN5', 'COL1A1', 'COPS3', 'COPS5', 'COPS6', 'CREB1', 'CREBBP', 'CRKL', 'CRK', 'CRP', 'CRYAB', 'CSNK1A1L', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK2A3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNAL1', 'CTNNBIP1', 'CTNND1', 'CTNND2', 'CTTN', 'CUL1', 'CUL4A', 'CUL4B', 'CXCR4', 'CXXC4', 'DAB2', 'DACT1', 'DACT2', 'DACT3', 'DCT', 'DCX', 'DDB1', 'DDX39A', 'DDX3X', 'DDX5', 'DHODH', 'DHX9', 'DKK1', 'DKK2', 'DKK3', 'DKK4', 'DLG1', 'DLG2', 'DLG4', 'DLG5', 'DLGAP1', 'DLL4', 'DLX1', 'DNM2', 'DNMT1', 'DPYD', 'DSC1', 'DSC2', 'DSC3', 'DSG1', 'DSG2', 'DSG3', 'DSG4', 'DSP', 'DUSP6', 'DVL1', 'DVL2', 'DVL3', 'E2F3', 'ECM1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'ELAVL1', 'EMD', 'ENAH', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHB2', 'EPHB3', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EXOC3', 'EXOC4', 'EYA4', 'EZH2', 'EZR', 'F2RL2', 'FAF1', 'AMER1', 'FANCA', 'FASLG', 'FAS', 'FAT1', 'FAT4', 'FBXW11', 'FBXW7', 'FERMT2', 'FER', 'FGF10', 'FGF13', 'FGF2', 'FGF3', 'FGF4', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FLT3', 'FMN1', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC2', 'FOXG1', 'FOXL1', 'FOXL2', 'FOXM1', 'FOXN3', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FRAT1', 'FRAT2', 'FRZB', 'FSCN1', 'FSTL1', 'FSTL3', 'FURIN', 'FUS', 'FXR1', 'FYN', 'FZD10', 'FZD1', 'FZD2', 'FZD3', 'FZD4', 'FZD5', 'FZD6', 'FZD7', 'FZD8', 'FZD9', 'GAPDH', 'GATA2', 'GATA4', 'GCG', 'GDF2', 'GDNF', 'GFRA1', 'GJA1', 'GLI1', 'GLI2', 'GLI3', 'GLIS2', 'GLUL', 'GNA11', 'GNA12', 'GNA13', 'GNAQ', 'GNAS', 'GPC3', 'GRIA2', 'GRIP1', 'GSK3A', 'GSK3B', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HAS2', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC7', 'HERC5', 'HES7', 'HGF', 'HGS', 'HHEX', 'HIC1', 'HIF1A', 'HINT1', 'HIPK2', 'HIST1H1C', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HMGB1', 'HNF1A', 'HNF4A', 'HNRNPA1', 'HNRNPA2B1', 'HNRNPK', 'HNRNPM', 'HOXA10', 'HOXB4', 'HPGD', 'HRAS', 'HSP90AB1', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPD1', 'HTRA1', 'HTT', 'HUWE1', 'IBSP', 'IDH1', 'IDH2', 'IFNB1', 'IFRD1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP4', 'IHH', 'IKBKB', 'IL6', 'CXCL8', 'ILK', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IRF3', 'ISG15', 'ISL1', 'ITGAE', 'ITGB1', 'ITGB7', 'ITK', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'AJUBA', 'JUN', 'JUP', 'KANK1', 'KAT2A', 'KAT2B', 'KAT5', 'KCNN1', 'KCTD1', 'KDM1A', 'KDR', 'KIF18B', 'KIF3A', 'KIF5B', 'KIFC3', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KRAS', 'KREMEN1', 'KRIT1', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LATS2', 'LDB1', 'LDHB', 'LDLR', 'LEF1', 'LEO1', 'LGR4', 'LGR5', 'LGR6', 'LHCGR', 'LHX8', 'LIF', 'LIMA1', 'LMNA', 'LMNB1', 'LOX', 'LRP4', 'LRP5L', 'LRP5', 'LRP6', 'LRRFIP1', 'LRRK2', 'LZTFL1', 'MACF1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8IP1', 'MAPK8', 'MAPK9', 'MDFIC', 'MDFI', 'MDK', 'MDM2', 'MED12', 'MED1', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'KMT2D', 'MLLT10', 'MLLT11', 'MLLT4', 'MLLT6', 'KMT2A', 'MME', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP25', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MRAP', 'MSH2', 'MSH6', 'MSN', 'MSX1', 'MSX2', 'MTDH', 'MTOR', 'MUC13', 'MUC1', 'MUTYH', 'MYCN', 'MYC', 'MYF5', 'MYO1D', 'MYO6', 'MYO7A', 'MYOD1', 'MYOG', 'NANOG', 'NCAM1', 'NCCRP1', 'NCOA2', 'NCSTN', 'NDP', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEURL2', 'NF1', 'NF2', 'NFAT5', 'NFKB1', 'NIT1', 'NKD1', 'NLK', 'NME1', 'NOG', 'NONO', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR0B1', 'NR4A1', 'NR4A2', 'NR5A1', 'NR5A2', 'NRAS', 'NRIP1', 'NTRK1', 'NTRK2', 'NTRK3', 'NUDT5', 'NUMB', 'NUP153', 'NUTF2', 'OTX2', 'PAK1', 'PAK2', 'PAK3', 'PANK4', 'PARD3', 'PARD6A', 'PARK2', 'PARP1', 'PAX3', 'PAX6', 'PAX7', 'PAX8', 'PDGFRA', 'PDGFRB', 'PECAM1', 'PGK1', 'PGR', 'PHB', 'JADE1', 'PI3', 'PICK1', 'PIK3CA', 'PIK3R1', 'PIK3R2', 'PIN1', 'PIP5K1A', 'PIP5K1C', 'PITX2', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAG1', 'PLEKHA7', 'PLK1', 'PML', 'PMS2', 'POLE', 'PORCN', 'POTEF', 'POU5F1', 'PPARD', 'PPARG', 'PPM1A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R2B', 'PPP2R5A', 'PPP2R5B', 'PPP2R5C', 'PPP2R5D', 'PPP2R5E', 'PRKACA', 'PRKACB', 'PRKACG', 'PRKAR1A', 'PRKCA', 'PRKCG', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRL', 'PRMT1', 'PROC', 'PROM1', 'PROP1', 'PSEN1', 'PSEN2', 'PSENEN', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTEN', 'PTGES3', 'PTGS2', 'PTH1R', 'PTH', 'PTK2', 'PTK7', 'PTMA', 'PTN', 'PTPN11', 'PTPN13', 'PTPN1', 'PTPN6', 'PTPRB', 'PTPRC', 'PTPRF', 'PTPRG', 'PTPRJ', 'PTPRK', 'PTPRM', 'PTPRU', 'PTPRZ1', 'PVRL1', 'PVRL2', 'PXN', 'PYGO1', 'PYGO2', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RALGDS', 'RANBP3', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RAPGEF2', 'RAPGEF6', 'RAPSN', 'RARA', 'RARB', 'RARG', 'RARS', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP5', 'RBMX', 'RBPJ', 'RBX1', 'RELA', 'REM1', 'RET', 'RHOA', 'RIPK2', 'RNF220', 'RNF43', 'ROBO1', 'ROCK1', 'ROCK2', 'ROR2', 'RPRD1A', 'RPS27A', 'RPSA', 'RSPO1', 'RSPO2', 'RSPO3', 'RSPO4', 'RUNX2', 'RUNX3', 'RUVBL1', 'RUVBL2', 'RXRA', 'RYK', 'S100A4', 'S100A6', 'SALL1', 'SALL4', 'SATB1', 'SCRIB', 'SDHC', 'SERPINE1', 'SETD2', 'SETD7', 'SFN', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHFM1', 'SHH', 'SIAH1', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT6', 'SKP1', 'SLC6A3', 'SLC9A3R1', 'SLCO1B3', 'SLCO2A1', 'SLIT1', 'SLK', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD5', 'SMAD7', 'SMAD9', 'SMARCA2', 'SMARCA4', 'SMARCA5', 'SMARCB1', 'SMO', 'SMURF1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNX1', 'SOST', 'SOX10', 'SOX13', 'SOX17', 'SOX1', 'SOX2', 'SOX3', 'SOX4', 'SOX6', 'SOX7', 'SOX8', 'SOX9', 'SP1', 'SP7', 'SPAG9', 'SPATA13', 'SPEN', 'SPN', 'SPP1', 'SRC', 'STAT3', 'STK11', 'STRAP', 'STX4', 'SUFU', 'SUV39H1', 'SYP', 'TADA3', 'TAX1BP3', 'TAZ', 'TBL1XR1', 'TBL1X', 'TBX5', 'TBX6', 'TCF12', 'TCF3', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TFAP2A', 'TFCP2', 'TFF1', 'TFF2', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBR1', 'TGFBR2', 'TGM2', 'TJP1', 'TJP2', 'TLE1', 'TLE2', 'TLE3', 'TLE4', 'TNFRSF11B', 'TNFSF11', 'TNF', 'TNIK', 'TNKS2', 'TNKS', 'TNS1', 'TOB1', 'TOP2A', 'TP53', 'TRAF4', 'TRIM33', 'TRIM37', 'TRIP10', 'TRRAP', 'TSC2', 'TUBA1A', 'TWIST1', 'TYMS', 'T', 'UBA52', 'UBB', 'UBC', 'UBE2B', 'UBE2R2', 'UBE3A', 'UBR5', 'UCHL1', 'UMPS', 'UPRT', 'USP4', 'USP7', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VAV2', 'VAV3', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VHL', 'VIM', 'WDR64', 'WDTC1', 'WHSC1', 'WIF1', 'WISP1', 'WLS', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'WWTR1', 'XPO1', 'YAP1', 'YARS', 'YEATS4', 'YES1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'ZAP70', 'ZAR1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZIC3', 'ZNRF3', 'ZYX', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.8448996630046981 Spearman Correlation: 0.8140954866947899 Coefficient of Determination: 0.7138554060336344 RMSE: 0.40439291214718404 NRMSE: 0.07954227225554368 MAPE: 305.53314457008304 Pearson Correlation: 0.00240877237939257 Spearman Correlation: 0.14847816057556829 Coefficient of Determination: -1.2572154128177991e+20 RMSE: 7598279168.048028 NRMSE: 2433481777.7561507 MAPE: 1001570472355.5715 Predictor: ElasticNet Pearson Correlation: 0.6175224129968648 Spearman Correlation: 0.5731951561236477 Coefficient of Determination: 0.34434582715546 RMSE: 0.6121363606231125 NRMSE: 0.12040447691249263 MAPE: 384.38529499200183 Pearson Correlation: 0.31627826190499814 Spearman Correlation: 0.2716617414182222 Coefficient of Determination: 0.09242039949909464 RMSE: 0.6455840031067275 NRMSE: 0.20675956658416386 MAPE: 251.41376135416786 Predictor: RandomForests Pearson Correlation: 0.48444163126925033 Spearman Correlation: 0.4428129039273123 Coefficient of Determination: 0.1579013875051818 RMSE: 0.6937328153949542 NRMSE: 0.13645413363394066 MAPE: 640.9949241795553 Pearson Correlation: 0.3071054684055508 Spearman Correlation: 0.3384356413421614 Coefficient of Determination: 0.07803265928793268 RMSE: 0.6506810609982016 NRMSE: 0.20839198850822654 MAPE: 256.67250707109 Protein: CCNE1 Protein Interaction Partners Count: 350 x_train_column_count: 347 x_train columns: ['ABL1', 'AKT1', 'AKT2', 'AKT3', 'ALDH18A1', 'ANAPC10', 'ANAPC13', 'ANAPC1', 'ANAPC2', 'ANAPC4', 'ANAPC5', 'ANAPC7', 'ANXA5', 'ARID1A', 'AR', 'ATM', 'AURKA', 'AURKB', 'BARD1', 'BCL2L1', 'BIRC5', 'BRCA1', 'BRCA2', 'BTG2', 'BTRC', 'BUB1B', 'BUB1', 'BUB3', 'RGCC', 'MLIP', 'CABLES1', 'CALM1', 'CAPRIN1', 'CASP3', 'CASP9', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNF', 'CCNG1', 'CCNH', 'CCNK', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CDC16', 'CDC20', 'CDC23', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC26', 'CDC27', 'CDC45', 'CDC6', 'CDC7', 'CDCA2', 'CDCA5', 'CDCA8', 'CDH1', 'CDK12', 'CDK13', 'CDK14', 'CDK15', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CENPA', 'CENPE', 'CHAF1A', 'CHD1L', 'CHEK1', 'CHEK2', 'CINP', 'CKS1B', 'CKS2', 'COPS5', 'CREBBP', 'CSK', 'CTNNB1', 'CUL1', 'CUL3', 'CUL4B', 'DBF4B', 'DBF4', 'DGCR8', 'DICER1', 'DTL', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'EBNA1BP2', 'ECT2', 'EGFR', 'EGF', 'ELAVL1', 'ELSPBP1', 'EP400', 'ERBB2', 'ERBB3', 'ERBB4', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM58A', 'FAM83H', 'FBXO5', 'FBXW7', 'FEN1', 'FGFR1', 'FGFR2', 'FGFR3', 'FOXM1', 'FZR1', 'GAPDH', 'GLI1', 'GMNN', 'GSK3B', 'H1F0', 'HDAC1', 'HEATR3', 'HERC5', 'HIST1H1A', 'HIST1H1B', 'HIST1H4A', 'HRAS', 'IFNAR1', 'IGF1R', 'IGF1', 'ITPKB', 'JUN', 'KIF11', 'KIF20A', 'KIF23', 'KIF2C', 'KPNA2', 'KRAS', 'LATS2', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'GMNC', 'MAD2L1', 'MAPK3', 'MATK', 'MAX', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDM2', 'MEGF11', 'MELK', 'MKI67', 'KMT2D', 'KMT2B', 'MNAT1', 'MRE11A', 'MTOR', 'MYBL2', 'MYC', 'NBN', 'NF1', 'NFYB', 'NMI', 'NOTCH1', 'NOTCH3', 'NPAT', 'NRAS', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PARK2', 'PARP1', 'PCBP4', 'PCNA', 'PIK3CA', 'PIK3R1', 'PKMYT1', 'PLK1', 'PLK4', 'POLA1', 'POLD1', 'PPP1R1C', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R4', 'PRC1', 'PRKAR1A', 'PRKAR2A', 'PRMT5', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB10', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSMF1', 'PTEN', 'PTGDR', 'PTK6', 'PTTG1', 'RAD51', 'RAD54L', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RBX1', 'REL', 'REM1', 'RHOA', 'RHOBTB3', 'RINT1', 'RNASE1', 'RPRD1A', 'RPS27A', 'RRM1', 'RRM2', 'RRN3', 'RSF1', 'SHFM1', 'SKP1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'ST8SIA1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STK3', 'STK4', 'TARBP1', 'TCP1', 'TERF1', 'TERT', 'TFDP1', 'TK1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TPX2', 'TTK', 'TUBG1', 'TYMS', 'UBA52', 'UBB', 'UBC', 'UBE2C', 'UBE2QL1', 'UBE2S', 'UHRF2', 'WEE1', 'WEE2', 'XIAP', 'YAP1', 'ZNF217', 'ZNF33A', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.3054222535676171 Spearman Correlation: 0.25099992442388414 Coefficient of Determination: -0.07468870532746563 RMSE: 0.4652512026798488 NRMSE: 0.16571725830092565 MAPE: 108.35393915165608 Pearson Correlation: -0.06983570513214632 Spearman Correlation: 0.22203381732003666 Coefficient of Determination: -7.698854705519264e+24 RMSE: 1798259947329.8818 NRMSE: 433974454552.66595 MAPE: 14389593695963.715 Predictor: ElasticNet Pearson Correlation: 0.5648256979914474 Spearman Correlation: 0.382249902509469 Coefficient of Determination: 0.29093863695732747 RMSE: 0.3779097291011317 NRMSE: 0.13460720537885368 MAPE: 95.1537931495671 Pearson Correlation: 0.4979199017903691 Spearman Correlation: 0.3359398093007634 Coefficient of Determination: 0.20045132373229657 RMSE: 0.5795112400391234 NRMSE: 0.1398535704899301 MAPE: 101.0632927774325 Predictor: RandomForests Pearson Correlation: 0.5751882433437747 Spearman Correlation: 0.3765410835393233 Coefficient of Determination: 0.3265013067028377 RMSE: 0.36831087378841676 NRMSE: 0.13118820081510837 MAPE: 96.14085210757408 Pearson Correlation: 0.4544562131088389 Spearman Correlation: 0.340948376898801 Coefficient of Determination: 0.19640532815825096 RMSE: 0.5809756544101062 NRMSE: 0.14020697792072453 MAPE: 98.31740697688933 Protein: CCND1 Protein Interaction Partners Count: 857 x_train_column_count: 847 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTL6B', 'AFP', 'AHR', 'AKAP12', 'AKAP8', 'AKR1B10', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDOA', 'ALK', 'ANO1', 'ANXA5', 'APAF1', 'APC', 'APEX1', 'AREG', 'ARHGEF2', 'ARID1A', 'ARID1B', 'ARID2', 'ARID4A', 'AR', 'ASIP', 'ATF2', 'ATF3', 'ATF4', 'ATM', 'ATXN1', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'B2M', 'BANP', 'BARX2', 'BAX', 'BCAR1', 'BCAR3', 'BCCIP', 'BCL2A1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL3', 'BCL6', 'BCL9', 'BECN1', 'BGLAP', 'BHLHE40', 'BIRC2', 'BIRC3', 'BIRC5', 'BMI1', 'BMP4', 'BMP6', 'BRAF', 'BRCA1', 'BRCA2', 'BRD2', 'BRD4', 'BTC', 'BTG2', 'BTRC', 'RGCC', 'COPRS', 'CA9', 'CARD11', 'CARM1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBFB', 'CCDC62', 'CCL2', 'CCL5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNC', 'CCND2', 'CCND3', 'CCNDBP1', 'CCNE1', 'CCNE2', 'CCNG2', 'CCNH', 'CCNK', 'CCNL1', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CD19', 'CD22', 'CD24', 'CD34', 'CD38', 'CD44', 'CD5', 'CD79A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC6', 'CDC73', 'CDCA7L', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK12', 'CDK13', 'CDK14', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK20', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CDX2', 'CENPE', 'CEP57', 'CFLAR', 'CHEK1', 'CHEK2', 'CHKA', 'CHUK', 'CKS1B', 'CKS2', 'CLCN3', 'COL1A1', 'CR2', 'CREB1', 'CREBBP', 'CRKL', 'CRYAB', 'CSF2', 'CTBP1', 'CTGF', 'CTNNB1', 'CTNND1', 'CTTN', 'CUL1', 'CUL3', 'CUL7', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'CYR61', 'DACH1', 'DAXX', 'DDIT3', 'DDX53', 'DECR1', 'DHFR', 'DICER1', 'DKK1', 'DKK3', 'DLL1', 'DMTF1', 'DND1', 'DNMT1', 'DNMT3A', 'DNTT', 'DVL1', 'DVL2', 'DYRK1A', 'DYRK1B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EDN1', 'EEF1A1', 'EGFR', 'EGF', 'EGLN2', 'EGR1', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF3I', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4E', 'EIF4G1', 'ELAVL1', 'ELSPBP1', 'EP300', 'EPCAM', 'EPHA2', 'EPHA7', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EWSR1', 'EYA1', 'EZH2', 'FABP4', 'FADD', 'FAM58A', 'FAM83H', 'FASLG', 'FAT1', 'FBXO31', 'FBXO4', 'FBXW7', 'FBXW8', 'FGF13', 'FGF19', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FHL2', 'FIGF', 'FLCN', 'FLNA', 'FLT1', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXC1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FRZB', 'FSTL3', 'FZD1', 'FZD2', 'FZD7', 'FZD9', 'FZR1', 'GADD45A', 'GAL', 'GAPDH', 'GAST', 'GATA3', 'GATA4', 'GDF15', 'GDF2', 'GGNBP2', 'GGT1', 'GIT1', 'GJA1', 'GJB1', 'GLI1', 'GLI2', 'GLI3', 'GLTSCR2', 'GNB2L1', 'GPER1', 'GRB2', 'GREB1', 'GRM4', 'GRP', 'GSK3B', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HBEGF', 'HBZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC4', 'HEXIM1', 'HEY1', 'HGF', 'HIF1A', 'HIST1H2AA', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AH', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AC', 'HIST2H2BE', 'HIST2H4A', 'HIST4H4', 'HMGA2', 'HMOX1', 'HNF1A', 'HNF4A', 'HNRNPD', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB8', 'ICAM1', 'ID1', 'ID2', 'IFNAR1', 'IFNB1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP3', 'IGFBP5', 'IHH', 'IKBKB', 'IL10', 'IL17A', 'IL2', 'IL4', 'IL6', 'IL7', 'CXCL8', 'ILK', 'INSM1', 'INS', 'IRF1', 'IRS1', 'ISG15', 'ITGB1', 'ITPKB', 'ITPKC', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUNB', 'JUND', 'JUN', 'KAT2A', 'KAT2B', 'KDM1A', 'KDM5B', 'KDR', 'KHDRBS1', 'KIF18B', 'KIN', 'KITLG', 'KIT', 'KLF13', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KRAS', 'KRT10', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LDB3', 'LEF1', 'LEP', 'LGALS3', 'LGR5', 'LIMK2', 'LIMS1', 'LIN28B', 'LMNA', 'LMNB1', 'LOX', 'LRP5', 'LRP6', 'LYN', 'MAFB', 'MAF', 'MAML1', 'MAML2', 'MAML3', 'MAMLD1', 'MAP2K1', 'MAP2K2', 'MAP2K4', 'MAP2K7', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDK', 'MDM2', 'MDM4', 'MEN1', 'MET', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'MLXIPL', 'MME', 'MMP11', 'MMP14', 'MMP15', 'MMP1', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MNAT1', 'MOV10', 'MSH2', 'MST1', 'MTOR', 'MUC1', 'MYBL2', 'MYB', 'MYCN', 'MYC', 'MYEOV', 'MYF5', 'MYOD1', 'MYOG', 'NACA2', 'NADSYN1', 'NANOG', 'NCAM1', 'NCOA1', 'NCOA3', 'NCOR1', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NGF', 'NME1', 'NME2', 'NMI', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NQO1', 'NR0B2', 'NR1H3', 'NR2E1', 'NR3C1', 'NR4A3', 'NRAS', 'NRF1', 'NUDT21', 'ODC1', 'ORAI1', 'ORAOV1', 'ORC4', 'PAK1', 'PAK4', 'PARK2', 'PARP1', 'PAX2', 'PAX5', 'PAX6', 'PBRM1', 'PBX3', 'PCNA', 'PDCD4', 'PDGFRA', 'PDGFRB', 'PDZK1', 'PECAM1', 'PELP1', 'PGR', 'PI3', 'PI4K2A', 'PIK3CA', 'PIK3R1', 'PKLR', 'PKM', 'PLAUR', 'PLAU', 'PLK1', 'PMAIP1', 'POLR2A', 'POTEF', 'POU2F1', 'POU5F1', 'PPARG', 'PPP2R4', 'PRDM5', 'PRKACA', 'PRL', 'PRMT5', 'PRNP', 'PROM1', 'PSAT1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTCHD3', 'PTEN', 'PTF1A', 'PTGS2', 'PTHLH', 'PTH', 'PTK2', 'PTK6', 'PTPN11', 'PTPRCAP', 'PTPRC', 'PXN', 'RAD51', 'RAF1', 'RALA', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RBX1', 'RCC1', 'RELA', 'RELB', 'REL', 'REM1', 'RET', 'RHEB', 'RHOA', 'RHOC', 'RICTOR', 'RNASE1', 'DROSHA', 'RND3', 'RNMT', 'ROCK1', 'RPRD1B', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KA6', 'RPS6KB1', 'RPS6', 'RPTOR', 'RREB1', 'RSF1', 'RUNX1', 'RUNX2', 'RUNX3', 'SDC1', 'SDHC', 'SENP1', 'SERPINE1', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHC1', 'SHFM1', 'SHH', 'SIRT1', 'SIX1', 'SIX3', 'SKP1', 'SKP2', 'SLC25A16', 'SLC25A6', 'SLC2A1', 'SLC35B2', 'SLC39A4', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMO', 'SNAI1', 'SNAI2', 'SNCA', 'SNIP1', 'SNW1', 'SNX33', 'SOCS3', 'SOX11', 'SOX17', 'SOX2', 'SOX4', 'SOX6', 'SOX9', 'SP1', 'SPN', 'SPP1', 'SPRY1', 'SRC', 'SREBF1', 'STAT1', 'STAT3', 'STAT4', 'STAT5A', 'STAT5B', 'STAT6', 'STC2', 'STIM1', 'STK11', 'STK24', 'STMN1', 'SUFU', 'SULF2', 'SUV39H1', 'TAF1', 'TBP', 'TBX2', 'TCEAL7', 'TCF4', 'TCF7L2', 'TCF7', 'TERT', 'TET3', 'TFDP1', 'TFF1', 'TGFA', 'TGFB1', 'TGFBR2', 'THBS1', 'THRA', 'THRB', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLR9', 'TM4SF1', 'TMPRSS4', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF8', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP2A', 'TP53', 'TP63', 'TP73', 'TRPV2', 'TSC22D3', 'TSC2', 'TWIST1', 'TXN', 'TYMS', 'UBA52', 'UBA7', 'UBB', 'UBC', 'UBE2C', 'UBTF', 'URGCP', 'USP18', 'USP2', 'USP9X', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VIP', 'VRK1', 'WDR77', 'WDTC1', 'WEE1', 'WHSC1', 'WIF1', 'WISP1', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'XBP1', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YY1', 'ZBTB17', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.5746660130351088 Spearman Correlation: 0.6286743376481072 Coefficient of Determination: 0.20645079811364286 RMSE: 0.20276593720154806 NRMSE: 0.12771209387379576 MAPE: 719.9695986361348 Pearson Correlation: -0.04882693217671918 Spearman Correlation: 0.08704760394433737 Coefficient of Determination: -5.827496552640494e+24 RMSE: 666170638873.2239 NRMSE: 425608309932.932 MAPE: 314026899242742.3 Predictor: ElasticNet Pearson Correlation: 0.37029089323557873 Spearman Correlation: 0.35606340536838094 Coefficient of Determination: 0.1029643602951944 RMSE: 0.2155822095616926 NRMSE: 0.13578442101789567 MAPE: 710.3151784910136 Pearson Correlation: 0.1301011637993635 Spearman Correlation: 0.17899225676130626 Coefficient of Determination: 0.013257657373948684 RMSE: 0.2741235561864351 NRMSE: 0.17513420233988516 MAPE: 272.01868498418395 Predictor: RandomForests Pearson Correlation: 0.44668059419773876 Spearman Correlation: 0.3686894674004228 Coefficient of Determination: 0.13704252146290907 RMSE: 0.2114476038973078 NRMSE: 0.1331802402860197 MAPE: 654.4221005718795 Pearson Correlation: 0.1324844985863118 Spearman Correlation: 0.08456956461786114 Coefficient of Determination: 0.006839827158605205 RMSE: 0.27501356922139863 NRMSE: 0.17570282083119218 MAPE: 289.3699205565947 Protein: ERBB2 Protein Interaction Partners Count: 663 x_train_column_count: 655 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACPP', 'ACTA2', 'ACTB', 'ACTG1', 'ADAM10', 'ADAM17', 'ADRB2', 'AFP', 'AGRN', 'AKT1S1', 'AKT1', 'AKT2', 'ALB', 'ALDH1A1', 'ALK', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'ANO1', 'ANXA2', 'ANXA5', 'AP2B1', 'APP', 'AREG', 'ARHGEF11', 'ARHGEF12', 'ARID1A', 'ARL6IP5', 'AR', 'ATM', 'ATP2B2', 'AURKB', 'AXIN1', 'BAG1', 'BARD1', 'BCAR1', 'BCAR3', 'BCAS1', 'BCL2L11', 'BCL2L1', 'BDNF', 'BECN1', 'BEST1', 'BIRC5', 'BLNK', 'BMI1', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BSG', 'BTC', 'MIEN1', 'CA9', 'CALU', 'CARTPT', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAV1', 'CBLB', 'CBLC', 'CBL', 'CCL27', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD19', 'CD22', 'CD247', 'CD24', 'CD274', 'CD28', 'CD33', 'CD34', 'CD44', 'CD46', 'CD52', 'CD68', 'CD6', 'CD80', 'CD82', 'CDC37', 'CDC42', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK4', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CEACAM5', 'CEP70', 'CHEK2', 'CHGA', 'CHKA', 'CHKB', 'CISH', 'CLDN3', 'CLDN4', 'CLDN7', 'CLTC', 'CNN1', 'COPS5', 'CPNE3', 'CREB1', 'CRKL', 'CRK', 'YBX3', 'CSF1', 'CSF2', 'CSF3', 'CSK', 'CSPG4', 'CTAG1B', 'CTLA4', 'CTNNB1', 'CTNND1', 'CTSB', 'CTSD', 'CTTN', 'CUL5', 'CXCL12', 'CXCR1', 'CXCR4', 'CYCS', 'CYP19A1', 'CYTIP', 'DCN', 'DDX41', 'DDX53', 'DHH', 'DIAPH1', 'DICER1', 'DLG4', 'DMTF1', 'DNAJA3', 'DNM2', 'DNMT1', 'DOCK1', 'DOCK7', 'DUSP6', 'E2F1', 'E2F3', 'EEA1', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EGFR', 'EGF', 'EIF3A', 'EIF4EBP1', 'EIF4E', 'ELAVL1', 'ELF3', 'EML4', 'ENO2', 'EP300', 'EPCAM', 'EPGN', 'EPHA2', 'EPS15', 'EPX', 'ERAL1', 'ERBB2IP', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ERRFI1', 'ESCO1', 'ESR1', 'ESR2', 'ESRRB', 'ETS1', 'ETS2', 'ETV4', 'ETV6', 'EZH2', 'EZR', 'FASLG', 'FASN', 'FBXW7', 'FCGR1A', 'FCGR1B', 'FCGRT', 'FGF10', 'FGF13', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FIGF', 'FLT1', 'FLT3LG', 'FN1', 'FOLH1', 'FOLR1', 'FOS', 'FOXA1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXP3', 'FREM2', 'FSIP1', 'FYN', 'GAB1', 'GABPB1', 'GAPDH', 'GATA3', 'GATA4', 'GDF2', 'GLI1', 'GLI2', 'GLS', 'GNA11', 'GNAQ', 'GNAS', 'GNRH1', 'GPER1', 'GRAP2', 'GRB2', 'GRB7', 'GSTP1', 'GZMB', 'H2AFX', 'H2AFY', 'HBEGF', 'HDAC1', 'HDAC6', 'HEATR6', 'HGF', 'HIF1A', 'HK1', 'HMGA2', 'HNF4A', 'HOXB7', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPG2', 'ICAM1', 'ID1', 'IDH1', 'IDH2', 'IFNG', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IHH', 'IL10', 'IL2', 'IL4', 'IL6R', 'IL6ST', 'IL6', 'CXCL8', 'ILK', 'INPP4B', 'INS', 'IQGAP1', 'IQSEC1', 'IRS1', 'ITGA5', 'ITGA6', 'ITGAV', 'ITGB1', 'ITGB3', 'ITGB4', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JUN', 'JUP', 'KDR', 'KITLG', 'KLK3', 'KLRK1', 'KRAS', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'L1CAM', 'LAMP1', 'LCN2', 'LDHA', 'LEP', 'LIN28A', 'LIN7A', 'LIN7B', 'LIN7C', 'LINGO1', 'LOX', 'LRIG1', 'LRPPRC', 'MAGEA1', 'MAGEA3', 'MAGED4B', 'MAGED4', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK8', 'MATK', 'MCL1', 'MDK', 'MDM2', 'MEMO1', 'MET', 'MGMT', 'MKI67', 'MLANA', 'MLH1', 'KMT2C', 'MME', 'MMP11', 'MMP14', 'MMP16', 'MMP1', 'MMP2', 'MMP7', 'MMP9', 'MPP1', 'MRAP', 'MRAS', 'MSH2', 'MSH6', 'MSLN', 'MTA1', 'MTOR', 'MUC13', 'MUC16', 'MUC1', 'MUC4', 'MUC6', 'MUCL1', 'MYBL2', 'MYCN', 'MYC', 'NANOG', 'NCAM1', 'NCL', 'NCOA1', 'NCOA3', 'NCOR1', 'NDRG1', 'NF1', 'NF2', 'NFE2L2', 'NGF', 'NISCH', 'NME1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NR1H4', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NRP1', 'NTF3', 'NTF4', 'OPCML', 'OSMR', 'PA2G4', 'PADI2', 'PAK1', 'PALB2', 'PAQR3', 'PARP1', 'PAX2', 'PCSK9', 'PDCD1LG2', 'PDCD1', 'PDCD4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PDGFRA', 'PDPN', 'PECAM1', 'PELP1', 'PEPD', 'PFKFB3', 'PGAP3', 'PGF', 'PGR', 'PI3', 'PIK3C2A', 'PIK3C2B', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIN1', 'PIP', 'PLAUR', 'PLAU', 'PLCG1', 'PLCG2', 'PLEK', 'PLG', 'PLXNB1', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPP3CA', 'PRDM10', 'PRF1', 'PRKACA', 'PRL', 'PROM1', 'PSCA', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'PTPN1', 'PTPRC', 'PTPRO', 'PTPRU', 'PTS', 'PXN', 'RAB25', 'RAD51', 'RAF1', 'RANBP2', 'RARA', 'RASA1', 'RASA2', 'RASSF1', 'RB1', 'RBPJ', 'RDX', 'RECK', 'REM1', 'REN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'S100A14', 'SCGB2A2', 'SCUBE2', 'SDC1', 'SDHC', 'SEMA3D', 'SEMA4D', 'SERPINB5', 'SERPINE1', 'SFRP1', 'PEAK1', 'SH3BGRL3', 'SH3BGRL', 'SH3TC2', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SIAH2', 'PMEL', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC4A7', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SMUG1', 'SMYD3', 'SNAI1', 'SNAI2', 'SOCS1', 'SOS1', 'SOX10', 'SOX2', 'SOX9', 'SP3', 'SPP1', 'SPRY2', 'SRCIN1', 'SRC', 'STARD3', 'STAT1', 'STAT2', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STOM', 'STUB1', 'SYP', 'TAGLN', 'TBX1', 'TERT', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TFRC', 'TGFA', 'TGFB1', 'THBS1', 'THRA', 'TIMP1', 'TJP1', 'TMPRSS2', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF4', 'TNFRSF8', 'TNFRSF9', 'TNFSF11', 'TNF', 'TNS1', 'TNS3', 'TNS4', 'TOB1', 'TOP1', 'TOP2A', 'TP53', 'TP63', 'TSC2', 'TWIST1', 'TYMS', 'TYR', 'UBA52', 'UBB', 'UBC', 'USP2', 'USP9X', 'VAV1', 'VAV2', 'VAV3', 'VCL', 'VEGFA', 'VEGFB', 'VEGFC', 'VIM', 'WASL', 'WDFY2', 'WDTC1', 'WNT10A', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7B', 'WNT9A', 'WNT9B', 'WT1', 'WWOX', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YES1', 'YY1', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.7790542655477217 Spearman Correlation: 0.6799191623123229 Coefficient of Determination: 0.6069125648876854 RMSE: 0.6444719771482315 NRMSE: 0.10979640818921435 MAPE: 839.6185581146542 Pearson Correlation: 0.09609554744143647 Spearman Correlation: 0.30985156811975606 Coefficient of Determination: -4.004593844823447e+19 RMSE: 5491095353.407381 NRMSE: 1214978505.0132496 MAPE: 383004849698.20605 Predictor: ElasticNet Pearson Correlation: 0.6585200386870447 Spearman Correlation: 0.555037284534875 Coefficient of Determination: 0.4085974374974156 RMSE: 0.7904985145019982 NRMSE: 0.13467443216893507 MAPE: 700.7511221339838 Pearson Correlation: 0.37609498392232454 Spearman Correlation: 0.3240414469008342 Coefficient of Determination: 0.11991772883433705 RMSE: 0.8140318242728479 NRMSE: 0.1801154606201677 MAPE: 392.46923391248913 Predictor: RandomForests Pearson Correlation: 0.55963215914676 Spearman Correlation: 0.43865056760878185 Coefficient of Determination: 0.2404204211403751 RMSE: 0.8958722767435523 NRMSE: 0.1526265868346853 MAPE: 599.6728836732467 Pearson Correlation: 0.3329844261331862 Spearman Correlation: 0.3105488915176955 Coefficient of Determination: 0.09645987492442043 RMSE: 0.8248091487651358 NRMSE: 0.18250008823213537 MAPE: 592.2319544952041 Protein: ERBB3 Protein Interaction Partners Count: 245 x_train_column_count: 247 x_train columns: ['ADAM17', 'AGRN', 'AGTR2', 'AKT1', 'AKT2', 'AKT3', 'ALAS2', 'ALB', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'APIP', 'AREG', 'AR', 'BAMBI', 'BDNF', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BTC', 'CADM4', 'CASK', 'CASP3', 'CBLB', 'CBLC', 'CBL', 'CCND1', 'CCNE1', 'CD44', 'CD82', 'CDC42', 'CDH1', 'CDK4', 'CDK5', 'CDKN1B', 'CDKN2A', 'CLEC16A', 'COMMD5', 'COQ7', 'CRKL', 'CRK', 'CRYZL1', 'CSF1', 'CSK', 'CSPG5', 'CTNNB1', 'DCN', 'DHH', 'DOCK7', 'DUSP6', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EIF4EBP1', 'EIF4E', 'EML4', 'EPCAM', 'EPGN', 'EPN1', 'ERBB2IP', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'ESR2', 'FBXO9', 'FGF10', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FIGF', 'FKBP14', 'FLNA', 'FLT3LG', 'FN1', 'FOXA1', 'FOXO3', 'FREM2', 'FTSJ1', 'GAB1', 'GAPDH', 'GLE1', 'GRB2', 'GRB7', 'GRHL2', 'HBEGF', 'HGF', 'HGS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPG2', 'IGF1', 'IGF2', 'IL6ST', 'ILK', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'ITPKB', 'JAK1', 'JAK2', 'JUN', 'KDR', 'KITLG', 'KRAS', 'L1CAM', 'LAMA1', 'LAMB1', 'LAMC2', 'LIN7A', 'LIN7B', 'LIN7C', 'LRIG1', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARCH7', 'MDM2', 'MET', 'MITF', 'MMP9', 'MRPL49', 'MTOR', 'MUC1', 'MUC4', 'MYC', 'N4BP1', 'NDRG1', 'NEDD4L', 'NEDD4', 'NF1', 'NGF', 'NICN1', 'NOTCH1', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NTF3', 'NTF4', 'OAT', 'PA2G4', 'PARK7', 'PCSK9', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PGR', 'PI3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIP5K1C', 'PLCG1', 'PLCG2', 'PPP1R9A', 'PRKACA', 'PTEN', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN22', 'PTPN2', 'RASA1', 'RASA2', 'REM1', 'RGS4', 'RHOA', 'RHOC', 'RNF41', 'ROR1', 'RRAS2', 'SH2B3', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SLC25A16', 'SMAD4', 'SNAI2', 'SOS1', 'SOX10', 'SOX2', 'SPARC', 'SPRY2', 'SRC', 'STAT3', 'STAT5A', 'STAT5B', 'SYN3', 'TCF7L2', 'TGFA', 'TMEFF2', 'TNFRSF13C', 'TNS1', 'TP53', 'USP8', 'VAV1', 'VAV2', 'VAV3', 'VEGFA', 'VEGFB', 'VEGFC', 'WNT1', 'WNT5A', 'ZEB1', 'ZNF217', 'KRBOX4', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.4475136022953163 Spearman Correlation: 0.4074630823199639 Coefficient of Determination: 0.09864277895845364 RMSE: 0.44518257870175104 NRMSE: 0.1201420005294203 MAPE: 210.68254827684333 Pearson Correlation: 0.12291196316446627 Spearman Correlation: 0.20838623772700787 Coefficient of Determination: -9.093477857954034e+24 RMSE: 1257387804065.5928 NRMSE: 608362429634.4143 MAPE: 39193289186069.07 Predictor: ElasticNet Pearson Correlation: 0.38112735626276456 Spearman Correlation: 0.37287606449110444 Coefficient of Determination: 0.1324273472929436 RMSE: 0.4367597578687102 NRMSE: 0.11786892293520396 MAPE: 233.92664270084788 Pearson Correlation: 0.3634116072042027 Spearman Correlation: 0.3637930196052898 Coefficient of Determination: 0.06148201997910374 RMSE: 0.4039480680654566 NRMSE: 0.195442350673229 MAPE: 264.9420333032224 Predictor: RandomForests Pearson Correlation: 0.4194203270210551 Spearman Correlation: 0.3666976633801271 Coefficient of Determination: 0.12757508162297904 RMSE: 0.43797943635700304 NRMSE: 0.11819807915244301 MAPE: 241.82585328964018 Pearson Correlation: 0.30671938228781115 Spearman Correlation: 0.40719606838246636 Coefficient of Determination: 0.034973069406437074 RMSE: 0.4096132092734752 NRMSE: 0.19818331814435333 MAPE: 248.8204481705095
Unnormalized
scenario = Scenario.AllInteractionPartners_Mutations
normalizeTechnique = NormalizeTechnique.UN
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 10.7401 | 141.1933 | 314.4482 | 0.0000 | 0.0 | 0.000 | 2.9988 | 9.4249 | 0.0 | 0.0000 | ... | 74.1138 | 533.3625 | 1053.4444 | 94.6772 | 881.2262 | 5343.4779 | 934.3482 | 508.0867 | 52.2652 | 0.8568 |
| TCGA-A1-A0SH-01 | 3.0048 | 79.8003 | 95.7054 | 0.0000 | 0.0 | 0.000 | 0.3612 | 3.9727 | 0.0 | 0.0000 | ... | 87.7601 | 581.0946 | 801.3977 | 19.8634 | 1353.2389 | 5464.9614 | 1312.7898 | 1001.1151 | 455.7746 | 0.0000 |
| TCGA-A1-A0SJ-01 | 4.9419 | 134.8733 | 63.6488 | 0.3658 | 0.0 | 0.000 | 0.3658 | 4.7554 | 0.0 | 0.7316 | ... | 83.7677 | 2731.4129 | 834.3850 | 51.2117 | 1092.6383 | 3032.0988 | 958.3905 | 718.7929 | 43.5299 | 0.0000 |
| TCGA-A1-A0SK-01 | 28.8560 | 1119.1932 | 166.7192 | 0.3152 | 0.0 | 1.891 | 0.0000 | 3.4668 | 0.0 | 0.0000 | ... | 69.0199 | 610.1481 | 1775.6067 | 158.5251 | 1380.7123 | 591.2386 | 1798.9285 | 1335.6445 | 49.4800 | 0.0000 |
| TCGA-A1-A0SQ-01 | 1.0368 | 41.5532 | 75.8447 | 0.0000 | 0.0 | 0.000 | 0.4034 | 5.6480 | 0.0 | 0.0000 | ... | 106.1019 | 617.2466 | 875.0378 | 25.4160 | 969.4402 | 2903.0761 | 715.6833 | 691.4776 | 17.7509 | 0.0000 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 Protein Interaction Partners Count: 369 x_train_column_count: 366 x_train columns: ['AATF', 'ABCC1', 'ABL1', 'ACTL6A', 'ACTL6B', 'AFAP1', 'AHR', 'AKT1', 'ANXA5', 'ARID1A', 'ARID1B', 'ARID4A', 'ARMCX1', 'ARMCX2', 'ARMCX3', 'ARNT', 'AR', 'ASF1A', 'ATF2', 'ATM', 'AURKB', 'BCR', 'BDP1', 'BGLAP', 'BRCA1', 'BRF1', 'FAM208A', 'C4BPA', 'CABIN1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CBFB', 'CBX1', 'CBX4', 'CBX5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNT2', 'CDC25A', 'CDC27', 'CDC6', 'CDH1', 'CDK14', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPA', 'CEBPB', 'CEBPD', 'CEBPE', 'CHEK1', 'CHEK2', 'CLNK', 'COL1A1', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUX1', 'DCAF10', 'DGKZ', 'DNAJA3', 'DNMT1', 'DNMT3A', 'DUSP1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EGFR', 'EGF', 'EID1', 'EIF2AK1', 'EIF2AK4', 'AGO2', 'ELF1', 'ENC1', 'EP300', 'ERBB2', 'ESD', 'ESR1', 'ESR2', 'EZH2', 'FBXW7', 'FMO5', 'FOS', 'FOXM1', 'FRK', 'FZR1', 'G6PD', 'GAPDH', 'GATA1', 'GJA1', 'GNB2L1', 'GRB2', 'GSC', 'GTF2H1', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HARS2', 'HARS', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC8', 'HDC', 'HES1', 'HIF1A', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HIST4H4', 'HMGA1', 'HMGA2', 'HRAS', 'HSP90AA1', 'HSPA1A', 'HSPA8', 'ID2', 'IFI16', 'INS', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'KDM2A', 'KDM4A', 'KDM5A', 'KDM5B', 'PPP1R26', 'KIF11', 'KRAS', 'KRT10', 'KRT14', 'KRT5', 'L3MBTL2', 'L3MBTL1', 'LIMD1', 'LIN52', 'LIN54', 'LIN9', 'LMNA', 'LOR', 'LPAR6', 'MAF', 'MAP2K7', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEF2C', 'MORF4L1', 'MRFAP1', 'MRPL11', 'MRPS18B', 'MSH6', 'MTL5', 'MYBL2', 'MYC', 'MYOD1', 'NACC2', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NCR1', 'NDC80', 'NEO1', 'NFYA', 'NFYB', 'NFYC', 'NGF', 'NOTCH1', 'NPM1', 'NRAS', 'ORC1', 'PA2G4', 'PAX2', 'PAX3', 'PAX5', 'PAX6', 'PAX8', 'PCNA', 'PELP1', 'PGR', 'PHB', 'PHF21B', 'PIAS4', 'PIK3CA', 'PIK3R1', 'PIK3R3', 'PLK1', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPIA', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP1R3A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R3B', 'PPRC1', 'PRB1', 'PRB3', 'PRB4', 'PRDM2', 'PRH1', 'PRH2', 'PRIM1', 'PRIM2', 'PRKCB', 'PRMT2', 'PSMA7', 'PSMC1', 'PSMD10', 'PTEN', 'PTGDR', 'RAF1', 'RB1CC1', 'RBAK', 'RBBP4', 'RBBP5', 'RBBP6', 'RBBP7', 'RBBP8', 'RBBP9', 'RBL1', 'RBL2', 'RBFOX2', 'RFC1', 'RPS6KB1', 'RUNX2', 'S100A6', 'SETD1B', 'SETD7', 'SIRT1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMC1A', 'SMC2', 'SMC4', 'SMC5', 'SMYD2', 'SNW1', 'SP100', 'SP1', 'SP3', 'SPI1', 'STAM', 'STAT3', 'SUV39H1', 'SUV420H2', 'SUZ12', 'TAF1', 'TBP', 'TERT', 'TFAP2A', 'TFDP1', 'TFDP3', 'TGM2', 'THAP1', 'TMPO', 'TNS1', 'TOP2A', 'TP53BP1', 'TP53', 'TP73', 'TRDMT1', 'TRIM27', 'TTK', 'UBE2I', 'UBE3A', 'UBL4A', 'UBN1', 'UBR4', 'UBTF', 'UHRF1', 'USP4', 'USP7', 'VEGFA', 'VPS39', 'WDR59', 'WDR73', 'WEE1', 'WWTR1', 'YAP1', 'YY1', 'ZBTB16', 'ZBTB7A', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.8238688799604211 Spearman Correlation: 0.730651042724117 Coefficient of Determination: 0.6787599313672386 RMSE: 0.12701659236896776 NRMSE: 0.04810323513310651 MAPE: 315.9840971416851 Pearson Correlation: -0.05427703259830031 Spearman Correlation: -0.06392059311286705 Coefficient of Determination: -115.53290510958927 RMSE: 3.027644612897125 NRMSE: 1.4957018781942393 MAPE: 575.8675751604886 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 4.852714902766548, tolerance: 0.0026969040165678213 positive)
Pearson Correlation: 0.811447523833246 Spearman Correlation: 0.7205931309992786 Coefficient of Determination: 0.6582083820502107 RMSE: 0.13101659434592147 NRMSE: 0.04961810049078639 MAPE: 436.1955289961303 Pearson Correlation: -0.05071513677685202 Spearman Correlation: -0.10840893571358892 Coefficient of Determination: -62.5616932758094 RMSE: 2.236033668138767 NRMSE: 1.1046341908472688 MAPE: 603.191918737598 Predictor: RandomForests Pearson Correlation: 0.5790069642120295 Spearman Correlation: 0.41688376525416515 Coefficient of Determination: 0.18390469711120883 RMSE: 0.20244918898417993 NRMSE: 0.07667077787698538 MAPE: 220.53623517082016 Pearson Correlation: 0.2712057000736925 Spearman Correlation: 0.34967362900429494 Coefficient of Determination: 0.0075019447596392785 RMSE: 0.2794122493756406 NRMSE: 0.1380338446597672 MAPE: 117.03651684548917 Protein: CDH1 Protein Interaction Partners Count: 834 x_train_column_count: 826 x_train columns: ['ABCB1', 'ABCG2', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTR3', 'ACVR1B', 'ADAM10', 'ADAM15', 'ADAM17', 'ADAM9', 'AFP', 'AIMP1', 'AJAP1', 'AKAP9', 'AKT1', 'AKT2', 'AKTIP', 'ALB', 'ALCAM', 'ALDH1A1', 'ALDH3A1', 'ALK', 'AMOTL2', 'ANAPC4', 'ANAPC7', 'ANO1', 'ANXA2', 'ANXA5', 'AP1M1', 'AP1M2', 'APC2', 'APC', 'AQP1', 'AQP5', 'AREG', 'ARF6', 'ARHGAP31', 'ARID1A', 'ARL2BP', 'ARMC7', 'ARPC1A', 'ARPC2', 'ARRB2', 'ARVCF', 'AR', 'CLMP', 'ASF1A', 'ATF2', 'ATF3', 'ATM', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BAG3', 'BANP', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL6B', 'BCL9L', 'BCORL1', 'BMI1', 'BMP2', 'BMP4', 'BMP6', 'BMP7', 'BNIP3', 'BRCA1', 'BRCA2', 'BSG', 'BTBD7', 'BTC', 'BTF3', 'ANAPC15', 'CA2', 'CA9', 'CALCA', 'CALR', 'CAPN1', 'CAPNS1', 'CASP3', 'CASP8', 'CASP9', 'CASS4', 'CAV1', 'CBLL1', 'CBL', 'CBX7', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CCR7', 'CD1A', 'CD1B', 'CD1C', 'CD1E', 'CD207', 'CD24', 'CD274', 'CD276', 'CD2AP', 'CD34', 'CD44', 'CD46', 'CD68', 'CD82', 'CDC16', 'CDC23', 'CDC27', 'CDC42', 'CDC6', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH24', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK14', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN3', 'CDX2', 'CEACAM5', 'CFL1', 'CGN', 'CHGA', 'CHL1', 'CLCA2', 'CLDN1', 'CLDN2', 'CLDN3', 'CLDN4', 'CLDN5', 'CLDN7', 'CNTN1', 'COL1A1', 'CORO1C', 'CRB3', 'CREB1', 'CREBBP', 'CRYAB', 'YBX3', 'CSDC2', 'CSE1L', 'CSF2', 'CSNK2A1', 'CSNK2A2', 'CST5', 'CTBP1', 'CTBP2', 'CTCF', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTSL', 'CTTN', 'CXCL12', 'CXCL1', 'CXCR4', 'CYP1B1', 'DAAM1', 'DAB2IP', 'DACH1', 'DAPK1', 'DAP', 'DDR1', 'DDR2', 'DDX3X', 'DICER1', 'DKK1', 'DLC1', 'DLG1', 'DLG5', 'DNM2', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOT1L', 'DPAGT1', 'DPEP1', 'DSP', 'DUOX1', 'DUSP4', 'DVL1', 'DVL2', 'E2F1', 'ECT2', 'EDN1', 'EFEMP1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'EHD1', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'ELAVL1', 'ELF3', 'ENAH', 'ENG', 'EP300', 'EPB41L3', 'EPCAM', 'EPHA10', 'EPHA1', 'EPHA2', 'EPPK1', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ESRP1', 'ESRP2', 'ETS1', 'ETS2', 'EXOC3', 'EXOC4', 'EYA2', 'EZH2', 'EZR', 'F11R', 'F2RL2', 'SUPT20H', 'FBXL5', 'FER', 'FGF10', 'FGF13', 'FGF17', 'FGF19', 'FGF2', 'FGF4', 'FGF5', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FMN1', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC1', 'FOXC2', 'FOXJ2', 'FOXK2', 'FOXL1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXQ1', 'FRMPD2', 'FSCN1', 'FUT4', 'FXYD5', 'FYN', 'FZD1', 'FZD4', 'FZD7', 'FZR1', 'G6PD', 'GAB2', 'GABPA', 'GADD45A', 'GAPDH', 'GAS6', 'GATA1', 'GATA3', 'GATA4', 'GATA6', 'GDNF', 'GFRA1', 'GGT1', 'GJA1', 'GJB1', 'GJB2', 'GKN2', 'GLI1', 'GLI2', 'GMNN', 'GNA12', 'GNA13', 'GNB2L1', 'GNL3', 'GPA33', 'GRB2', 'GRHL2', 'GRHL3', 'GSK3B', 'GSN', 'GSTP1', 'H2AFZ', 'HAVCR2', 'HBEGF', 'HDAC1', 'HDAC2', 'HEPACAM', 'HES1', 'HGF', 'HGS', 'HIF1A', 'HMGA2', 'HNF4A', 'HOXB4', 'HOXD10', 'HPGDS', 'HPGD', 'HRAS', 'HSP90AA1', 'HSPA5', 'ICAM1', 'ID1', 'ID2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP3', 'IL10', 'IL15', 'IL17A', 'IL1B', 'IL24', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IQSEC1', 'IRS1', 'IRS2', 'ITGA5', 'ITGA6', 'ITGAE', 'ITGAM', 'ITGB1', 'ITGB4', 'ITGB7', 'ITPKB', 'IVL', 'JAG1', 'JAK2', 'AJUBA', 'JUN', 'JUP', 'KDM1A', 'KDM6A', 'KDR', 'KEAP1', 'KIFC3', 'KIT', 'KLF4', 'KLF5', 'KLF8', 'KLK3', 'KLK7', 'KLRG1', 'KRAS', 'KRT10', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'KRT9', 'LAMA1', 'LAMB1', 'LAMC2', 'LASP1', 'LATS1', 'LATS2', 'LCN2', 'LEF1', 'LEP', 'LGALS3', 'LGALS4', 'LGALS9', 'LGR5', 'LIF', 'LIMA1', 'LIN28A', 'LIPG', 'LLGL2', 'LMNA', 'LOR', 'LOXL2', 'LOXL3', 'LOX', 'LRP5', 'LRP6', 'LY6K', 'MACC1', 'MACROD1', 'MAD2L2', 'MAGI1', 'MAP2K1', 'MAP2K7', 'MAP4K5', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARK2', 'MARVELD2', 'MCAM', 'MCL1', 'MDM2', 'MED1', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGAT5', 'MGMT', 'MKI67', 'MLH1', 'MLLT4', 'MME', 'MMP11', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP1', 'MMP25', 'MMP27', 'MMP2', 'MMP3', 'MMP7', 'MMP8', 'MMP9', 'MPP5', 'MRAP', 'MSH2', 'MSN', 'MT1G', 'MTA1', 'MTA3', 'MTBP', 'MTDH', 'MTOR', 'MUC1', 'MUC4', 'MYCN', 'MYC', 'MYH6', 'MYO6', 'MYO7A', 'NANOG', 'NCAM1', 'NCOA1', 'NCSTN', 'NDRG1', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEUROG3', 'NF2', 'NFE2L2', 'NFIC', 'NKD2', 'NKX2-1', 'NKX6-1', 'NKX6-2', 'NME1', 'NOG', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NR2F1', 'NRP2', 'NUDT21', 'NUMBL', 'NUMB', 'NUP98', 'NUTF2', 'OTUB1', 'OVOL1', 'OVOL2', 'PARD3', 'PARD6A', 'PAX2', 'PAX5', 'PAX6', 'PAX8', 'PCSK9', 'PDCD4', 'PDGFRB', 'PDPN', 'PEBP1', 'PECAM1', 'PGR', 'PHLPP1', 'PI3', 'PIK3CA', 'PIK3R1', 'PIP5K1A', 'PIP5K1C', 'PIP', 'PIR', 'PITX1', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAUR', 'PLAU', 'PLCD1', 'PLEKHA7', 'PLG', 'PODXL', 'POLR2C', 'POSTN', 'POTEF', 'POU5F1', 'PPARA', 'PPARGC1A', 'PPARG', 'PPL', 'PPP6C', 'PRAME', 'PRDM10', 'PRKAR1A', 'PRKCA', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRKG1', 'PRMT5', 'PROC', 'PROM1', 'PRSS8', 'PSEN1', 'PTCH1', 'PTEN', 'PTF1A', 'PTGS2', 'PTK2', 'PTPN11', 'PTPN14', 'PTPRC', 'PTPRF', 'PTPRJ', 'PTPRM', 'PTPRS', 'PTPRT', 'PTPRU', 'PTRH2', 'PVRL1', 'PVRL2', 'PVR', 'PXN', 'RAB11A', 'RAB25', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RACGAP1', 'RAF1', 'RALA', 'RALBP1', 'RALGDS', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RARB', 'RASSF1', 'RB1', 'RBM4', 'RCOR1', 'RDX', 'REM1', 'RET', 'RHOA', 'RHOB', 'RHOC', 'RHOD', 'RICTOR', 'RND3', 'ROCK1', 'ROCK2', 'RPS6KB1', 'RPTOR', 'RRM2', 'RUNX2', 'RUNX3', 'S100A14', 'S100A4', 'S100A8', 'SATB1', 'SCRIB', 'SDC1', 'SDC4', 'SDHC', 'SELE', 'SELL', 'SELP', 'SEMA3C', 'SEMA3F', 'SENP1', 'SERPINB4', 'SERPINB5', 'SERPINE1', 'SFN', 'SFRP1', 'SFRP2', 'SFTPC', 'SHH', 'SIK1', 'SIN3A', 'SIRT1', 'SIRT2', 'SIRT4', 'SIRT7', 'SIX1', 'SIX2', 'SKIL', 'SKP2', 'SLC2A1', 'SLC39A6', 'SLC6A3', 'SLC9A3R1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SNAI1', 'SNAI2', 'SNAI3', 'SNX16', 'SNX1', 'SOX10', 'SOX17', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPARC', 'SPDEF', 'SPINT1', 'SPP1', 'SPRY1', 'SRCIN1', 'SRC', 'SRXN1', 'ST14', 'ST7L', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STX4', 'STYK1', 'SUCLG2', 'SUMO1', 'SUZ12', 'SYNJ2', 'SYP', 'TACC3', 'TACSTD2', 'TATDN1', 'TBX1', 'TBX3', 'TCF15', 'TCF4', 'TDGF1', 'TERT', 'TET2', 'TFF1', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBI', 'TGFBR1', 'TGFBR2', 'THBS1', 'THEM4', 'THUMPD1', 'THY1', 'TIAM1', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLN1', 'TLR4', 'TMPRSS2', 'TMPRSS4', 'TNFRSF6B', 'TNF', 'TNK2', 'TNS1', 'TP53BP1', 'TP53BP2', 'TP53', 'TRIM21', 'TRIM29', 'TRIM44', 'TRIP10', 'TRPS1', 'TSPYL2', 'TWIST1', 'TWIST2', 'TYRP1', 'T', 'UBE2I', 'UBE2S', 'USP48', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VEZT', 'VHL', 'VIM', 'VIPAS39', 'VPS33B', 'VTN', 'WASL', 'WDFY2', 'WDTC1', 'WIF1', 'WISP1', 'WISP3', 'WNT10A', 'WNT10B', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT9A', 'WNT9B', 'WT1', 'XIAP', 'YAP1', 'YBX1', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 5.982052565720834e-14 NRMSE: 1.0055052805743254e-14 MAPE: 6.8224020671708e-11 Pearson Correlation: 0.09618475664060737 Spearman Correlation: 0.28390400936494004 Coefficient of Determination: -23.821137936602682 RMSE: 5.780735849883043 NRMSE: 0.93627285314422 MAPE: 3745.4132647881456 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 1.004117592938587, tolerance: 0.06837930598298066 positive)
Pearson Correlation: 0.999982911086732 Spearman Correlation: 0.9999370760576877 Coefficient of Determination: 0.9999642544020806 RMSE: 0.006746623650614867 NRMSE: 0.0011340197419217163 MAPE: 4.04828917209362 Pearson Correlation: 0.17201581066449206 Spearman Correlation: 0.33423568432348066 Coefficient of Determination: -24.570674286516862 RMSE: 5.867368580901072 NRMSE: 0.9503042630463983 MAPE: 3035.965827582841 Predictor: RandomForests Pearson Correlation: 0.7559597974811081 Spearman Correlation: 0.7072839403758547 Coefficient of Determination: 0.5645761922122592 RMSE: 0.7446141538285428 NRMSE: 0.12515996063882184 MAPE: 192.1172879405309 Pearson Correlation: 0.7645302684149959 Spearman Correlation: 0.6921577067580342 Coefficient of Determination: 0.5782555357320693 RMSE: 0.7535238037316196 NRMSE: 0.12204395771624173 MAPE: 126.28616103041732 Protein: CDH2 Protein Interaction Partners Count: 472 x_train_column_count: 467 x_train columns: ['ABCG2', 'ABL1', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTR3', 'ADAM10', 'ADH1A', 'AFP', 'AHSG', 'AKT1', 'AKT3', 'ALB', 'ALCAM', 'ALDH1A1', 'AMBN', 'AMELX', 'AMOTL1', 'AMTN', 'ANGPT1', 'ANO8', 'ANXA5', 'APC2', 'APC', 'APLP2', 'APOA1', 'APOA2', 'APOA5', 'APOB', 'APOE', 'APOL1', 'APPL1', 'APP', 'ARHGAP32', 'ARMC7', 'ARPC5', 'ARVCF', 'AR', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BCL2L1', 'BDNF', 'BMI1', 'BMP15', 'BMP2', 'BMP4', 'BMP7', 'BNIP2', 'BOC', 'BPIFB2', 'RGCC', 'GSKIP', 'C3', 'C4A', 'CABLES1', 'CADM1', 'CALU', 'CASP3', 'CAV1', 'CBLL1', 'CCNA2', 'CCNB1', 'CCND1', 'CD24', 'CD34', 'CD44', 'CD80', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK4', 'CDK5', 'CDK6', 'CDKN2A', 'CDON', 'CDX2', 'CEBPZ', 'CFL1', 'CHGB', 'CHL1', 'CHRDL1', 'CKAP4', 'CLDN11', 'CLDN3', 'CLDN4', 'CLDN7', 'CORT', 'CP', 'CREBBP', 'CRP', 'CSF1', 'CSK', 'CST3', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTTN', 'CXCL12', 'CXCR4', 'CYLD', 'CYR61', 'DBN1', 'DDR1', 'DDR2', 'DKK1', 'DLG4', 'DLG5', 'DMP1', 'DNAJC3', 'DSP', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EFNB2', 'EFNB3', 'EGFR', 'EGF', 'EHMT2', 'EIF2AK3', 'ENAM', 'ENG', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA4', 'EPHB2', 'EPS8', 'ERBB2', 'ERBB4', 'ESR1', 'ESRP1', 'EXOC4', 'EZH2', 'EZR', 'F11R', 'F5', 'EVA1A', 'FAM20A', 'FAM20C', 'FBN1', 'FER', 'FGA', 'FGF13', 'FGF23', 'FGF2', 'FGFR1', 'FGFR4', 'FGG', 'FN1', 'FOXC2', 'FOXD3', 'FOXO1', 'FOXP4', 'FSTL1', 'FSTL3', 'FUCA2', 'GAA', 'GAPDH', 'GAS6', 'GATA4', 'GFAP', 'GJA10', 'GJA1', 'GJA3', 'GJB6', 'GJC1', 'GJC3', 'GJD3', 'GJD4', 'GLI1', 'GOLM1', 'GPC3', 'GRIA1', 'GRIA2', 'HGF', 'HMGA2', 'HNF4A', 'HRAS', 'HRC', 'HSP90B1', 'HSPA5', 'IARS2', 'IGF1R', 'IGF1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL1B', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'INVS', 'IQGAP1', 'ISL1', 'ITGA6', 'ITGB1', 'ITIH2', 'ITPKB', 'JAG1', 'JAM3', 'JUN', 'JUP', 'KCNA5', 'KDR', 'KIAA2022', 'KIF5B', 'KIT', 'KLF4', 'KNG1', 'KRAS', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT8', 'KTN1', 'L1CAM', 'LAMB1', 'LAMB2', 'LAMC1', 'LEF1', 'LGALS1', 'LRP5', 'LRP6', 'LRRC7', 'LTBP1', 'LTBP3', 'MAP1B', 'MAP2K6', 'MAP2K7', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MATN3', 'MBTPS1', 'MCAM', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEPE', 'MET', 'MFGE8', 'MFI2', 'MGAT4A', 'MIA3', 'MKI67', 'MLLT4', 'MMP14', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MPDZ', 'MPP5', 'MRAP', 'MRPL49', 'MSLN', 'MSN', 'MTHFD1', 'MUC1', 'MUC4', 'MXRA8', 'MYC', 'MYO10', 'MZF1', 'NANOG', 'NCAM1', 'NCSTN', 'NDRG1', 'NENF', 'NES', 'NFASC', 'NGF', 'NKX2-5', 'NLGN1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTUM', 'NRCAM', 'NT5C', 'NT5E', 'NTRK2', 'NUCB1', 'NUMBL', 'NUMB', 'OLFM3', 'P4HB', 'PARD3', 'PAX6', 'PCSK9', 'PC', 'PDGFRB', 'PDIA4', 'PDIA6', 'PECAM1', 'PENK', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PITX2', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PNPLA2', 'POU5F1', 'PPT2', 'PRKCDBP', 'PRKCSH', 'PROC', 'PROM1', 'PRPH', 'PRSS23', 'PSEN1', 'PTEN', 'PTK2', 'PTPN11', 'PTPN1', 'PTPN2', 'PTPRC', 'PTPRS', 'PVRL1', 'PVRL2', 'PVRL3', 'PXN', 'QSOX1', 'RAB11FIP1', 'RAB3D', 'RAB5A', 'RAC1', 'RCN1', 'RELN', 'REM1', 'RHOA', 'RHOB', 'RHOC', 'ROBO1', 'PTBP3', 'RPS6KB1', 'RUNX2', 'S100A14', 'S100A4', 'SARS2', 'SCARB2', 'SCG2', 'SCG3', 'SDC2', 'SEMA3A', 'SENP3', 'SERPINA10', 'SERPINA1', 'SERPINC1', 'SERPIND1', 'SERPINE1', 'SHH', 'SHISA5', 'SIRT7', 'SKP1', 'SLC2A1', 'SLC9A3R1', 'SLIT1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SNAI1', 'SNAI2', 'SNAI3', 'SOX10', 'SOX18', 'SOX1', 'SOX2', 'SOX4', 'SOX9', 'SP7', 'SPAG9', 'SPARCL1', 'SPARC', 'SPP1', 'SPP2', 'SRC', 'ST6GALNAC5', 'STAT3', 'STC2', 'SYP', 'TBX1', 'TCF3', 'TEK', 'TF', 'TGFB1', 'TGFBR1', 'TGM2', 'TGOLN2', 'THY1', 'TIMP1', 'TJP1', 'TJP3', 'TMEM132A', 'TNC', 'TNF', 'TNNT1', 'TP53', 'TRPS1', 'TSC2', 'TWIST1', 'TWIST2', 'USP9X', 'VANGL2', 'VCAM1', 'VCAN', 'VCL', 'VEGFA', 'VGF', 'VIM', 'VTN', 'VWA1', 'WFS1', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7A', 'XIRP1', 'ZBTB16', 'ZEB1', 'ZEB2', 'ZSCAN1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.945769563385938 Spearman Correlation: 0.924852939002695 Coefficient of Determination: 0.8944800670272275 RMSE: 0.12057818496431943 NRMSE: 0.04454524412488204 MAPE: 2735.5743713576016 Pearson Correlation: -0.04153944240783934 Spearman Correlation: -0.00762364647351478 Coefficient of Determination: -4035.1547691073406 RMSE: 23.83133246255532 NRMSE: 12.298773010556495 MAPE: 2254.2602751224495 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 6.111588980877023, tolerance: 0.007399072171665535 positive)
Pearson Correlation: 0.9283685466323881 Spearman Correlation: 0.9050255021192608 Coefficient of Determination: 0.8616564910897421 RMSE: 0.13806413691274408 NRMSE: 0.05100508591574183 MAPE: 2556.1787045335523 Pearson Correlation: 0.09726175114551508 Spearman Correlation: 0.07278314310798947 Coefficient of Determination: -12.662044108960353 RMSE: 1.3865076220473855 NRMSE: 0.7155429746851347 MAPE: 772.6437954641859 Predictor: RandomForests Pearson Correlation: 0.5713874422244214 Spearman Correlation: 0.49981627485692354 Coefficient of Determination: 0.1934604792708685 RMSE: 0.33336063546965655 NRMSE: 0.12315354467324126 MAPE: 881.891873830838 Pearson Correlation: 0.1583024608594388 Spearman Correlation: 0.1951077943615257 Coefficient of Determination: 0.024041650405892456 RMSE: 0.37057836575772324 NRMSE: 0.19124651171890553 MAPE: 105.64700580687712 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.5729780199091096 Spearman Correlation: 0.5407177293306035 Coefficient of Determination: 0.3283038112989639 RMSE: 0.1711261830213943 NRMSE: 0.12005821899126838 MAPE: 542.8036872087162 Pearson Correlation: 0.033830325008307065 Spearman Correlation: 0.3885523363574286 Coefficient of Determination: -2.438897268426167 RMSE: 0.3793773019369883 NRMSE: 0.29037458721095766 MAPE: 346.69398891046353 Predictor: ElasticNet Pearson Correlation: 0.5726825739305108 Spearman Correlation: 0.5406775107016716 Coefficient of Determination: 0.32795488613497126 RMSE: 0.17117062460085566 NRMSE: 0.12008939818772497 MAPE: 547.2323088460702 Pearson Correlation: 0.03382422226001366 Spearman Correlation: 0.3878938640132671 Coefficient of Determination: -2.390129800273074 RMSE: 0.3766776964316849 NRMSE: 0.2883083148477125 MAPE: 342.9068233400213 Predictor: RandomForests Pearson Correlation: 0.5488348194628491 Spearman Correlation: 0.5498808348759677 Coefficient of Determination: 0.26165640371302934 RMSE: 0.17941521825494025 NRMSE: 0.12587361666872948 MAPE: 552.0017208748178 Pearson Correlation: 0.4711648997100896 Spearman Correlation: 0.5027704614183982 Coefficient of Determination: 0.20767549842787159 RMSE: 0.1821014003704093 NRMSE: 0.1393800279909142 MAPE: 358.2338803004399 Protein: PTEN Protein Interaction Partners Count: 884 x_train_column_count: 876 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ABTB1', 'ACTB', 'ACTG1', 'ADM', 'AEBP1', 'AFP', 'AKT1S1', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'AMHR2', 'ANXA2', 'ANXA5', 'APAF1', 'APC', 'ARAF', 'AREG', 'ARHGAP21', 'ARID1A', 'ARID2', 'ARL2BP', 'AR', 'ATF3', 'ATG12', 'ATG5', 'ATG7', 'ATM', 'ATRX', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'AXL', 'BAD', 'BAG5', 'BARD1', 'BAX', 'BBC3', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BIRC3', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BNIP3', 'BRAF', 'BRCA1', 'BRCA2', 'BRD4', 'BTG2', 'BTK', 'SPRTN', 'CLHC1', 'CA9', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBL', 'CBX7', 'CCL2', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD24', 'CD274', 'CD34', 'CD44', 'CD79A', 'CD79B', 'CDC14A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC7', 'CDH17', 'CDH1', 'CDH2', 'CDIPT', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CENPC', 'CFL1', 'CFLAR', 'CFTR', 'CHD1', 'CHD8', 'CHEK1', 'CHEK2', 'CHKA', 'CHORDC1', 'CHUK', 'CLTCL1', 'CLTC', 'CNOT6L', 'CREB1', 'CREBBP', 'CRP', 'CSF1R', 'CSF1', 'CSK', 'CSN2', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTGF', 'CTLA4', 'CTNNB1', 'CUL1', 'CUL3', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'DAPK1', 'DAXX', 'DBN1', 'DCAF13', 'DDIT4', 'DDR2', 'DECR1', 'DEPTOR', 'DGCR8', 'DICER1', 'DLC1', 'DLG1', 'DLG4', 'DNM1L', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOLPP1', 'DUSP1', 'DUSP6', 'DUT', 'DVL1', 'DYRK1A', 'E2F1', 'E2F2', 'E2F3', 'ECSCR', 'EGFR', 'EGF', 'EGR1', 'EIF2AK2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4EBP2', 'EIF4E', 'EIF4G1', 'EML4', 'ENDOG', 'EP300', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA3', 'EPHA4', 'EPHA5', 'EPHA7', 'EPHB1', 'EPHB2', 'EPHB3', 'EPHB4', 'ERBB2', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ESR1', 'ETS1', 'ETS2', 'ETV1', 'ETV6', 'EYA2', 'EZH2', 'EZR', 'FABP4', 'FASLG', 'FASN', 'FBXW7', 'FCGR1B', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FIG4', 'FKBP1A', 'FLCN', 'FLT1', 'FLT3', 'FLT4', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXG1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FOXP3', 'FRK', 'FYN', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GCK', 'GDF10', 'GDF2', 'GFAP', 'GJA1', 'GLI1', 'GNA11', 'GNAQ', 'GNAS', 'GNRHR', 'GRASP', 'GRB2', 'GRPR', 'GSK3A', 'GSK3B', 'GSTP1', 'H1F0', 'H2AFX', 'HAVCR2', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HES1', 'HGF', 'HIF1A', 'HIST1H2BA', 'HK1', 'HK2', 'HMGA2', 'HNF4A', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA1A', 'HSPA1B', 'HSPA2', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'ID1', 'ID4', 'IDH1', 'IDH2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL17A', 'IL21', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INPP4A', 'INPP4B', 'INPP5A', 'INPP5B', 'INPP5D', 'INPP5E', 'INPP5F', 'INPP5J', 'INPP5K', 'INPPL1', 'INSRR', 'INSR', 'INS', 'IPMK', 'IPO11', 'IQGAP1', 'IRAK1', 'IRS1', 'IRS2', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'ITPR3', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUN', 'KAT2B', 'KDM5B', 'KDM5C', 'KDM6A', 'KDR', 'KEAP1', 'ATG13', 'KIF11', 'KLLN', 'KITLG', 'KIT', 'KLF17', 'KLF2', 'KLF4', 'KLK3', 'KPNA1', 'KPNA2', 'KPNA5', 'KPNA6', 'KPNA7', 'KRAS', 'KRT14', 'KRT5', 'KRT8', 'LASP1', 'LATS1', 'LATS2', 'LCK', 'LDHA', 'LEF1', 'LEP', 'LGALS3', 'LIG4', 'LOX', 'LRIG1', 'LRP1B', 'LRRK2', 'LYN', 'LYPD1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAN2C1', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K3', 'MAP2K4', 'MAP2K7', 'MAP3K1', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK4', 'MAPK6', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAP1', 'MAPT', 'MARCH2', 'MARCH3', 'MAST1', 'MAST2', 'MAST3', 'MAST4', 'MATK', 'MCL1', 'MCM2', 'MCM7', 'MCRS1', 'MDK', 'MDM2', 'MDM4', 'MECOM', 'MECP2', 'MED12', 'MEN1', 'MET', 'MGMT', 'MINPP1', 'MITF', 'MKI67', 'MKRN1', 'MLH1', 'MLH3', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT1', 'MLST8', 'MME', 'MMP2', 'MMP9', 'MOV10', 'MRAP', 'MRE11A', 'MSH2', 'MSH6', 'MTDH', 'MTMR2', 'MTOR', 'MTSS1', 'MUTYH', 'MVP', 'MYCN', 'MYC', 'MYLK', 'MYOCD', 'NANOG', 'NCKAP1', 'NCOA3', 'NCOR2', 'NDFIP1', 'NDFIP2', 'NDRG1', 'NDRG2', 'NEDD4L', 'NEDD4', 'NES', 'NF1', 'NF2', 'NFATC1', 'NFATC4', 'NFE2L2', 'NFKBIA', 'NGFR', 'NKX3-1', 'NLGN3', 'NLGN4X', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR1H4', 'NR3C2', 'NRAS', 'NRP2', 'NTRK1', 'NTRK2', 'NUMB', 'OCRL', 'OLIG2', 'OTUD3', 'PALB2', 'PARD3', 'PARD6A', 'PARD6B', 'PARD6G', 'PARK2', 'PARK7', 'PARP1', 'PAX8', 'PBK', 'PBRM1', 'PCGF2', 'PCSK9', 'PDCD1', 'PDCD4', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PDK1', 'PDK2', 'PDPK1', 'PDZK1', 'PECAM1', 'PGM3', 'PGR', 'PHF6', 'PHLPP1', 'PHLPP2', 'PI3', 'PI4K2A', 'PI4K2B', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIK3R5', 'PIKFYVE', 'PINK1', 'PIP4K2A', 'PIP4K2B', 'PIP4K2C', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PIP5KL1', 'PKM', 'PLCB1', 'PLCB2', 'PLCB3', 'PLCB4', 'PLCD1', 'PLCD3', 'PLCD4', 'PLCE1', 'PLCG1', 'PLCG2', 'PLCH1', 'PLCH2', 'PLCZ1', 'PLEKHA1', 'PLEK', 'PLK1', 'PLK2', 'PLK3', 'BPIFA1', 'PMAIP1', 'PML', 'PMPCA', 'PMS1', 'PMS2', 'POLE', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPM1D', 'PPP2R1A', 'PPP2R4', 'PPP2R5A', 'PPP2R5E', 'PPP3CA', 'PPP6C', 'PRDX1', 'PREX2', 'PRKAA1', 'PRKAA2', 'PRKCI', 'PRKCZ', 'PRKDC', 'PRMT5', 'PROM1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTER', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPMT1', 'PTPN11', 'PTPN12', 'PTPN13', 'PTPN1', 'PTPRC', 'PTPRD', 'PTS', 'PXN', 'RAB7A', 'RAC1', 'RAC2', 'RAD51C', 'RAD51D', 'RAD51', 'RAD52', 'RAF1', 'RASA1', 'RASSF1', 'RB1CC1', 'RB1', 'RBL1', 'RBL2', 'RBM38', 'RBFOX2', 'RCN1', 'RECK', 'RELA', 'REL', 'REM1', 'RETN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'DROSHA', 'RNF146', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KB1', 'RPS6KB2', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'RRM1', 'RSL1D1', 'RUNX3', 'RWDD3', 'SACM1L', 'SALL4', 'SCAI', 'SCGB1D4', 'SCRIB', 'SDHB', 'SDHC', 'SERPINA1', 'SERPINA4', 'SERPINB5', 'SESN1', 'SESN2', 'SETD2', 'SGK1', 'SGK2', 'SGK3', 'SHANK2', 'SHARPIN', 'SHC1', 'SHFM1', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT5', 'SIRT6', 'SIRT7', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC2A4', 'SLC34A2', 'SLC9A3R1', 'SLC9A3R2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNCA', 'SNX27', 'SOCS1', 'SOCS3', 'SOD2', 'SOS1', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPOP', 'SPRY1', 'SPRY2', 'SRBD1', 'SRC', 'SREBF1', 'SRF', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STMN1', 'STUB1', 'STX16', 'SUCLG2', 'SUMO1', 'SYK', 'SYNJ1', 'SYNJ2', 'TACSTD2', 'TBX1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TEP1', 'TERT', 'TET1', 'TGFB1', 'TGFBR1', 'TGFBR2', 'TGM2', 'THBS1', 'TIMP1', 'TIMP3', 'TJP1', 'TLR4', 'TMEM55A', 'TMEM55B', 'TMPRSS2', 'TNFRSF10B', 'TNFSF10', 'TNF', 'TNKS2', 'TNKS', 'TNPO2', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TPM1', 'TRAF6', 'TRIM27', 'TRIM29', 'TSC1', 'TSC2', 'TTN', 'TUT1', 'TWIST1', 'TWSG1', 'TXN', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2E1', 'UBE2I', 'UBE2L3', 'UBE3A', 'ULK1', 'ULK2', 'USP10', 'USP13', 'USP18', 'USP28', 'USP7', 'USP8', 'UTF1', 'UVRAG', 'VCL', 'VDR', 'VEGFA', 'VHL', 'WDR18', 'WDTC1', 'WEE1', 'WIPI1', 'WIPI2', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT9A', 'WNT9B', 'WT1', 'WWP1', 'WWP2', 'XIAP', 'XPO1', 'XPO5', 'YAP1', 'YES1', 'YWHAB', 'YWHAZ', 'YY1', 'ZEB1', 'ZEB2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 1.4090199016484748e-14 NRMSE: 2.2031426810233364e-15 MAPE: 1.99037461266112e-11 Pearson Correlation: 0.13115593662405228 Spearman Correlation: 0.1400204858062628 Coefficient of Determination: -9.466166959314682 RMSE: 1.6067879170387978 NRMSE: 0.5295589997491258 MAPE: 1058.984211006239 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.42949709366877825, tolerance: 0.021075629727119613 positive)
Pearson Correlation: 0.9999810888560023 Spearman Correlation: 0.9999417256100753 Coefficient of Determination: 0.9999591391743529 RMSE: 0.004004577529015699 NRMSE: 0.000626155504497803 MAPE: 6.597534541949977 Pearson Correlation: 0.07685828342695245 Spearman Correlation: 0.15680421422300264 Coefficient of Determination: -7.303498487479409 RMSE: 1.4311833773429743 NRMSE: 0.4716839289904997 MAPE: 1059.8099812153857 Predictor: RandomForests Pearson Correlation: 0.5983317064201549 Spearman Correlation: 0.5566130776311595 Coefficient of Determination: 0.31039299635334594 RMSE: 0.5202402729896276 NRMSE: 0.08134473817365766 MAPE: 343.05542700563353 Pearson Correlation: 0.3129213352792975 Spearman Correlation: 0.32680873480407685 Coefficient of Determination: 0.0853305514619388 RMSE: 0.4750035053447232 NRMSE: 0.15654983367764919 MAPE: 188.1204497344643 Protein: BRCA2 Protein Interaction Partners Count: 361 x_train_column_count: 351 x_train columns: ['ABL1', 'ACHE', 'ADRB1', 'ADRB2', 'AKT1', 'ALK', 'APEX1', 'ARID1A', 'ARPC1A', 'AR', 'ATAD5', 'ATM', 'ATRIP', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'B3GALTL', 'BACH1', 'BARD1', 'BCCIP', 'BCHE', 'BDNF', 'BECN1', 'BIRC5', 'BLM', 'BMI1', 'BRCA1', 'BRCC3', 'BRE', 'BRIP1', 'SLX4', 'BUB1B', 'BUB1', 'BUB3', 'SFR1', 'RHNO1', 'RMI2', 'BABAM1', 'MMS22L', 'CASC1', 'CASC5', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCNE1', 'CDC25A', 'CDC25C', 'CDC45', 'CDC6', 'CDH1', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CENPE', 'CENPF', 'CEP55', 'CHEK1', 'CHEK2', 'CHRNA1', 'CLSPN', 'CNTROB', 'CREM', 'CSMD3', 'CTNNB1', 'CYP19A1', 'DMC1', 'DNA2', 'DSN1', 'DYNC1LI2', 'EGFR', 'EGF', 'ELAC2', 'EME1', 'EME2', 'ENAM', 'EPCAM', 'ERBB2', 'ERBB3', 'ERCC1', 'ERCC2', 'ERCC4', 'ERCC5', 'ERCC6', 'ERCC8', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM175A', 'FANCA', 'FANCB', 'FANCC', 'FANCD2', 'FANCE', 'FANCF', 'FANCG', 'FANCI', 'FANCL', 'FANCM', 'FBN1', 'FBXO18', 'FBXW7', 'FEN1', 'FGFR2', 'FHIT', 'FLNA', 'FOXM1', 'GAPDH', 'GEN1', 'SLX1B', 'H2AFX', 'HELQ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HMG20A', 'HMG20B', 'HMMR', 'HNRNPC', 'HOXB13', 'HRAS', 'HUS1', 'ITPKB', 'KAT2B', 'KAT5', 'KEAP1', 'SPIDR', 'KIF23', 'KIF4A', 'KIT', 'KLK3', 'KRAS', 'KRT5', 'LIG1', 'LIG3', 'LIG4', 'LIMD1', 'LSP1', 'MAD2L2', 'MAGED1', 'MAMSTR', 'MAP2K2', 'MAP3K1', 'MCM10', 'MCPH1', 'MDC1', 'MDM2', 'MDM4', 'MEN1', 'MGMT', 'MKI67', 'MLH1', 'MLH3', 'KMT2C', 'MND1', 'MORF4L1', 'MRE11A', 'MRPL36', 'MSH2', 'MSH3', 'MSH4', 'MSH5', 'MSH6', 'MTA2', 'FAN1', 'MUC1', 'MUS81', 'MUTYH', 'MYC', 'NBN', 'NCAPG', 'NEDD4', 'NF1', 'NHEJ1', 'NNT', 'NOTCH1', 'NSL1', 'NSMCE4A', 'OBFC1', 'OGG1', 'PALB2', 'PARG', 'PARP1', 'PARP2', 'PARP3', 'PAXIP1', 'PCNA', 'PDLIM7', 'PDS5A', 'PDS5B', 'PGR', 'PIK3CA', 'PLCB4', 'PLEC', 'PLEKHH1', 'PLK1', 'PMS1', 'PMS2', 'PNOC', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'POLN', 'POLQ', 'PRDM9', 'PRKDC', 'PRSS1', 'PSMC3IP', 'PSMD3', 'PSMD6', 'PTEN', 'RAD17', 'RAD18', 'RAD1', 'RAD21', 'RAD23B', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD52', 'RAD54B', 'RAD54L', 'RAD9A', 'RAD9B', 'RAG2', 'RASSF1', 'RBBP8', 'RBMX', 'RECQL4', 'RECQL5', 'RECQL', 'RET', 'REV1', 'REV3L', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RNF168', 'RNF8', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SKP2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCAL1', 'SMARCB1', 'SMC1A', 'SMC2', 'SMC3', 'SMC4', 'SMC5', 'SMC6', 'SMUG1', 'SNAI2', 'SP1', 'SPO11', 'STAT5A', 'STK11', 'STRA13', 'SUV39H1', 'SYCP3', 'TBCE', 'TDP1', 'TERT', 'TEX15', 'TMPRSS2', 'TNS1', 'TOP1', 'TOP2A', 'TOP3A', 'TOP3B', 'TOPBP1', 'TOX3', 'TP53BP1', 'TP53', 'TPX2', 'TRIP12', 'PRSS58', 'TTK', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2D1', 'UBE2E2', 'UBE2E3', 'UBE2N', 'UBE2T', 'UIMC1', 'USF1', 'USP11', 'USP15', 'USP1', 'USP21', 'USP4', 'UVRAG', 'VEGFA', 'VWF', 'WDR48', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WTIP', 'XPA', 'XPO1', 'XRCC1', 'XRCC2', 'XRCC3', 'XRCC4', 'XRCC5', 'XRCC6', 'ZFYVE26', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.8454010479353389 Spearman Correlation: 0.8120135223720151 Coefficient of Determination: 0.7147029318501694 RMSE: 0.10555049364409864 NRMSE: 0.06827946492185492 MAPE: 270.53743966755104 Pearson Correlation: 0.020965348263197316 Spearman Correlation: 0.04804902942281085 Coefficient of Determination: -4.00712938587055 RMSE: 0.4133736681390266 NRMSE: 0.41370463184450224 MAPE: 640.1565431608517 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 3.3259762905405097, tolerance: 0.002096995577721637 positive)
Pearson Correlation: 0.8364968213679352 Spearman Correlation: 0.8027855548544885 Coefficient of Determination: 0.6996258207996335 RMSE: 0.10830360504108977 NRMSE: 0.07006042270392518 MAPE: 258.03460291511124 Pearson Correlation: 0.03504241342292678 Spearman Correlation: 0.0750683775588032 Coefficient of Determination: -2.0436086761743355 RMSE: 0.32228701528547 NRMSE: 0.3225450513265313 MAPE: 494.2856215942105 Predictor: RandomForests Pearson Correlation: 0.60386639891161 Spearman Correlation: 0.5287781457532937 Coefficient of Determination: 0.19635272742338494 RMSE: 0.1771513033962627 NRMSE: 0.11459724903695205 MAPE: 155.59914979554776 Pearson Correlation: 0.3217142094796893 Spearman Correlation: 0.32712945947914707 Coefficient of Determination: 0.07344564996461644 RMSE: 0.17782132885814864 NRMSE: 0.17796369981800306 MAPE: 126.72724445348126 Protein: CDKN2A Protein Interaction Partners Count: 612 x_train_column_count: 605 x_train columns: ['ABCC1', 'ABL1', 'ACAP1', 'ACAP2', 'ACP5', 'ACTA1', 'ACTB', 'ACTG1', 'ADAMTS9', 'ADAP1', 'AFP', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD12', 'ANXA5', 'AP3D1', 'AP3S1', 'AP3S2', 'APAF1', 'APBA1', 'APBA2', 'ARAP1', 'ARAP2', 'ARF1', 'ARF3', 'ARF4', 'ARF5', 'ARF6', 'ARFGAP1', 'ARFGAP3', 'ARFIP2', 'ARFRP1', 'ARID1A', 'ARID2', 'ARID5B', 'ARL10', 'ARL1', 'ARL2', 'ARL3', 'ARL4A', 'ARL5A', 'AR', 'ASAP1', 'ATM', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'AXIN1', 'BAP1', 'BCL2L11', 'BCL2L1', 'BCL6', 'BECN1', 'BIRC5', 'BMI1', 'BRAF', 'BRCA1', 'BRCA2', 'BUB1B', 'RGCC', 'C1QBP', 'RABL6', 'CACNA1G', 'CADM1', 'CAMK1D', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNL1', 'CD274', 'CD34', 'CD44', 'CDC123', 'CDC20', 'CDC25A', 'CDC25C', 'CDC42', 'CDC45', 'CDC5L', 'CDC6', 'CDC7', 'CDH13', 'CDH17', 'CDH1', 'CDH2', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5RAP3', 'CDK6', 'CDK7', 'CDKAL1', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDX2', 'CEACAM5', 'CEBPB', 'CEBPE', 'CHEK1', 'CHEK2', 'CHFR', 'CHKA', 'COMMD1', 'CRABP1', 'CREBBP', 'CSF1R', 'CSF1', 'CSF2', 'CTBP1', 'CTBP2', 'CTCF', 'CTLA4', 'CTNNB1', 'CTSK', 'CUL1', 'CUL3', 'CXCR4', 'CYCS', 'CYLD', 'CYTH1', 'CYTH2', 'CYTH3', 'DAB2IP', 'DAP', 'DAXX', 'DICER1', 'DIRAS3', 'DLEC1', 'DMTF1', 'DNAH3', 'DNMT1', 'DNMT3A', 'DNMT3B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EBF1', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EP300', 'EPCAM', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ETS1', 'ETV6', 'EWSR1', 'EZH1', 'EZH2', 'FAT1', 'FBXW7', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FKBP2', 'FLT3', 'FMN2', 'FN1', 'FOS', 'FOXA1', 'FOXM1', 'FOXN2', 'FOXO1', 'FOXO3', 'FTO', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GATA4', 'GATA5', 'GBF1', 'GDF15', 'GGA1', 'GGA2', 'GGA3', 'GIT1', 'GIT2', 'GLI1', 'GLTSCR2', 'GMNN', 'GNA11', 'GNAQ', 'GNAS', 'GNL3', 'GOLPH3', 'GP5', 'GSPT1', 'GSTP1', 'H2AFX', 'H2AFZ', 'H3F3A', 'H3F3B', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC9', 'HELLS', 'HGF', 'HHEX', 'HIC1', 'HIF1A', 'HIST1H2BA', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AA3', 'HIST2H2AC', 'HIST2H4A', 'HIST4H4', 'HLTF', 'HMGA2', 'HNF4A', 'HNRNPD', 'HOPX', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA4', 'HSPA9', 'HUWE1', 'ID1', 'IDH1', 'IDH2', 'IGF1R', 'IGF1', 'IGF2BP2', 'IGF2R', 'IGF2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING4', 'INS', 'IQSEC1', 'IRS1', 'ISOC2', 'ITGAM', 'JAK1', 'JAK2', 'JAK3', 'JAZF1', 'JUNB', 'JUN', 'KAT2B', 'KAT5', 'KCNJ11', 'KCNQ1', 'KDM1A', 'KDM2B', 'KDM6A', 'KDM6B', 'KDR', 'KEAP1', 'KIAA1549', 'KIT', 'KLF4', 'KRAS', 'KRT19', 'KRT20', 'KRT5', 'KRT7', 'LATS2', 'LOX', 'LRRK2', 'MACROD2', 'MAF', 'MAP2K1', 'MAP2K4', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MAX', 'MC1R', 'MCL1', 'MCM10', 'MCM2', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEN1', 'MEOX1', 'MEOX2', 'MET', 'MGMT', 'MITF', 'MKRN1', 'MLANA', 'MLH1', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT3', 'MME', 'MMP2', 'MMP7', 'MMP9', 'MOV10', 'MRAS', 'MSH2', 'MSH6', 'MTA1', 'MTAP', 'MTHFR', 'MTNR1B', 'MTOR', 'MUC1', 'MYBL2', 'MYCL', 'MYCN', 'MYC', 'MYOD1', 'KAT6A', 'NANOG', 'NCAM1', 'NCL', 'NCOR1', 'NES', 'NEUROG1', 'NF1', 'NF2', 'NFATC1', 'NFE2L2', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NPM1', 'NRAS', 'NSUN2', 'ORC4', 'ORC5', 'OSBP2', 'P2RY8', 'PA2G4', 'PALB2', 'PARP1', 'PAX3', 'PAX5', 'PAX8', 'PBRM1', 'PCGF2', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PEX19', 'PGR', 'PHLDB1', 'PI3', 'PIAS2', 'PIGF', 'PIK3CA', 'PIK3R1', 'PIP4K2A', 'PLEKHA3', 'PLEKHA8', 'PLEK', 'PLK1', 'PMAIP1', 'PML', 'PMS2', 'POTEF', 'POU5F1', 'PPARA', 'PPARG', 'PPM1D', 'PPP1R9B', 'PPP3CA', 'PRDM2', 'PRMT6', 'PROM1', 'PRSS1', 'PSMC3', 'PSMD10', 'PSME3', 'PTCH1', 'PTEN', 'PTER', 'PTF1A', 'PTGS2', 'PTPN11', 'PTPRC', 'PTPRD', 'PXN', 'RAB11A', 'RAB5A', 'RABEP1', 'RABGEF1', 'RAC2', 'RAD51', 'RAF1', 'RAP2B', 'RARB', 'RASSF1', 'RASSF2', 'RB1', 'RBL1', 'RBL2', 'RCC1', 'RELA', 'RELB', 'REL', 'RET', 'RHOA', 'DROSHA', 'RNF2', 'RNF43', 'ROS1', 'RPL11', 'RPRM', 'RPS27A', 'RPS6KB1', 'RRAS2', 'RRAS', 'RTEL1', 'RUNX2', 'RUNX3', 'SDHC', 'SENP1', 'SENP3', 'SERPINE1', 'SERTAD1', 'SETD2', 'SFN', 'SFRP1', 'SFRP2', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SIX2', 'SKP2', 'SLC30A8', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SNAI1', 'SNAI2', 'SNCA', 'SOCS1', 'SOX2', 'SP1', 'SPEN', 'SRC', 'STAT1', 'STAT3', 'STK11', 'STK25', 'STK33', 'STMN1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUV39H1', 'SUZ12', 'SYNE1', 'SYP', 'TBL1XR1', 'TBRG1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TERT', 'TET2', 'TFDP1', 'TFPI2', 'TGFBR2', 'THADA', 'THBS1', 'TIMP3', 'TMCO1', 'TMEM115', 'TNFRSF10B', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TRADD', 'TRIM28', 'TRIP12', 'PRSS58', 'TSC2', 'TSPAN8', 'TTF1', 'TWIST1', 'TWSG1', 'TYR', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2I', 'UBE3A', 'UCHL1', 'USP7', 'UTF1', 'VEGFA', 'VHL', 'WDTC1', 'WEE1', 'WFS1', 'WHSC1', 'WIF1', 'WRN', 'WT1', 'WWOX', 'XRCC1', 'YY1', 'ZBTB17', 'ZBTB7A', 'ZEB1', 'ZFP91', 'ZNF148', 'ZNF217', 'ZNF227', 'ZNF410', 'ZNF420', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 7.124542177307346e-14 NRMSE: 1.6106119989391533e-14 MAPE: 5.0723893044692024e-11 Pearson Correlation: 0.1252263688606401 Spearman Correlation: 0.08535264852209541 Coefficient of Determination: -34.08861630312115 RMSE: 4.424102422449032 NRMSE: 1.1947346536454313 MAPE: 7404.804634882831 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 1.8756560592630063, tolerance: 0.02218251593097602 positive)
Pearson Correlation: 0.9971501323066427 Spearman Correlation: 0.9956929064354475 Coefficient of Determination: 0.9942674474248107 RMSE: 0.04866226074242915 NRMSE: 0.011000850173489125 MAPE: 36.677362308429444 Pearson Correlation: 0.16800855063099107 Spearman Correlation: 0.1420983318700615 Coefficient of Determination: -27.62586802256817 RMSE: 3.995962315410613 NRMSE: 1.0791148569836926 MAPE: 4619.5866984988315 Predictor: RandomForests Pearson Correlation: 0.6607511781830171 Spearman Correlation: 0.6039855415911017 Coefficient of Determination: 0.42435018378000744 RMSE: 0.4876378899475922 NRMSE: 0.1102380219164897 MAPE: 179.7477011975791 Pearson Correlation: 0.7092247029117462 Spearman Correlation: 0.5793828864710735 Coefficient of Determination: 0.4563914662849009 RMSE: 0.5506620972013854 NRMSE: 0.14870702057828392 MAPE: 286.0885966516016 Protein: TP53 Protein Interaction Partners Count: 1000 x_train_column_count: 991 x_train columns: ['ABCB1', 'ABCC1', 'ABL1', 'ACTB', 'ACTL6A', 'ADAM17', 'AFP', 'AGT', 'AICDA', 'AIFM2', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD2', 'ANXA1', 'ANXA2', 'ANXA5', 'APAF1', 'APBB1', 'APC', 'APEX1', 'APOBEC3B', 'APP', 'ARID1A', 'ARID3A', 'AR', 'ASF1A', 'ASXL1', 'ATF2', 'ATF3', 'ATG7', 'ATM', 'ATN1', 'ATRIP', 'ATRX', 'ATR', 'ATXN3', 'AURKA', 'AURKB', 'AXIN1', 'AXL', 'BACE1', 'BAG1', 'BAG2', 'BAIAP2L1', 'BAK1', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2A1', 'BCL2L11', 'BCL2L12', 'BCL2L14', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BID', 'BIRC3', 'BIRC5', 'BIRC6', 'BLM', 'BMF', 'BMI1', 'BMX', 'BNIP3L', 'BNIP3', 'BRCA1', 'BRCA2', 'BRCC3', 'BRD1', 'BRD4', 'BRD7', 'BRE', 'BRIP1', 'BRPF1', 'BRPF3', 'BTG2', 'BTK', 'BUB1B', 'BUB1', 'RHNO1', 'RGCC', 'RMI2', 'CNOT11', 'SETD9', 'CA9', 'CABIN1', 'CABLES1', 'CAPN1', 'CARM1', 'CASP10', 'CASP1', 'CASP2', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBX2', 'CBX4', 'CBX6', 'CBX8', 'CCDC106', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNG2', 'CCNH', 'CCNK', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CD24', 'CD274', 'CD34', 'CD40LG', 'CD40', 'CD44', 'CD82', 'CDC20', 'CDC25A', 'CDC25C', 'CDH17', 'CDH1', 'CDK12', 'CDK13', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CEACAM5', 'CEBPB', 'CENPJ', 'CFL1', 'CFLAR', 'CHD3', 'CHD4', 'CHD8', 'CHEK1', 'CHEK2', 'CHUK', 'CISH', 'CITED2', 'CLSPN', 'CLU', 'CNOT10', 'CNOT1', 'CNOT2', 'CNOT3', 'CNOT4', 'CNOT6L', 'CNOT6', 'CNOT7', 'CNOT8', 'COPS5', 'CREB1', 'CREBBP', 'CRYAB', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK1G1', 'CSNK1G2', 'CSNK1G3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTCF', 'CTGF', 'CTNNB1', 'CUL4A', 'CUL7', 'CUL9', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP1A1', 'DACH1', 'DAPK1', 'DAP', 'DAXX', 'DDB1', 'DDB2', 'DDIT4', 'DDX17', 'DDX3X', 'DDX5', 'DECR1', 'DGCR8', 'DHCR24', 'DHFR', 'DIABLO', 'DICER1', 'DKK1', 'DMTF1', 'DNA2', 'DNAJA3', 'DNAJB1', 'DNMT1', 'DNMT3A', 'DNTT', 'DPYD', 'DRAM1', 'DTL', 'DUSP1', 'DUSP2', 'DYRK1A', 'DYRK2', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EEF1A1', 'EEF1A2', 'EGFR', 'EGF', 'EGR1', 'EHMT1', 'EHMT2', 'EI24', 'EIF2AK2', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4EBP1', 'ELANE', 'ELAVL1', 'ELL3', 'ELL', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHA3', 'EPHB2', 'ERBB2', 'ERBB4', 'ERCC1', 'ERCC2', 'ERCC3', 'ERCC6', 'ESR1', 'ETS1', 'ETS2', 'EWSR1', 'EXO1', 'EZH2', 'F2', 'FADD', 'AMER1', 'FAM175B', 'FANCC', 'FANCD2', 'FASLG', 'FAS', 'FBL', 'FBXO11', 'FBXO4', 'FBXW7', 'FGF1', 'FGF2', 'FGFR3', 'FHIT', 'FHL2', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FSCN1', 'FUT4', 'FZR1', 'G3BP1', 'G6PD', 'GADD45A', 'GADD45B', 'GADD45G', 'GAPDH', 'GATAD2A', 'GATAD2B', 'GDF15', 'GFI1', 'GLS2', 'GLTSCR2', 'GNL3', 'GRAMD4', 'GRB10', 'GRB14', 'GSK3B', 'GSTP1', 'GTF2H1', 'GTSE1', 'H1F0', 'H2AFX', 'HAMP', 'HCK', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC5', 'HDAC7', 'HDAC8', 'HDAC9', 'HERC5', 'HIC1', 'HIF1A', 'HIPK1', 'HIPK2', 'HIPK3', 'HIPK4', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HK2', 'HMGA1', 'HMGA2', 'HMGB1', 'HMGB2', 'HMMR', 'HMOX1', 'HNF4A', 'HNRNPK', 'HNRNPL', 'HOXA5', 'HPGDS', 'HRAS', 'HSF1', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA1A', 'HSPA1B', 'HSPA1L', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'HSPB1', 'HSPB2', 'HTT', 'HUS1', 'HUWE1', 'ICAM1', 'ID2', 'ID4', 'IDH1', 'IDH2', 'IFI16', 'IFNAR1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IGFBP7', 'IKBKB', 'IL17A', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING2', 'ING3', 'ING4', 'ING5', 'INSIG1', 'INS', 'IRF1', 'ISG15', 'ITPKB', 'JAG1', 'JAK2', 'JMY', 'JUN', 'KAT2A', 'KAT2B', 'KAT5', 'KDM1A', 'KDM6A', 'KDM6B', 'KDR', 'KHDRBS1', 'CCAR2', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KPNA2', 'KRAS', 'KRT14', 'KRT17', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'L3MBTL1', 'LAMA4', 'LEP', 'LGALS7B', 'LGALS7', 'LIF', 'LIG4', 'LIN28A', 'PIDD1', 'LRRK2', 'LYN', 'MAF1', 'MAF', 'MAGEA2', 'MAP1LC3B', 'MAP2K1', 'MAP2K3', 'MAP2K7', 'MAP3K1', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MBD3', 'MCL1', 'MCM7', 'MDC1', 'MDH1', 'MDM2', 'MDM4', 'MEAF6', 'MECOM', 'MELK', 'MET', 'MGMT', 'MIF', 'MKI67', 'MKRN1', 'MLH1', 'KMT2D', 'KMT2C', 'MMP13', 'MMP1', 'MMP2', 'MMP9', 'MOV10', 'MRE11A', 'MSH2', 'MSH6', 'MSX1', 'MT1A', 'MT2A', 'MTA1', 'MTA2', 'MTA3', 'MTOR', 'MUC1', 'MUTYH', 'MYBBP1A', 'MYB', 'MYCN', 'MYC', 'MYOCD', 'KAT8', 'KAT6A', 'NANOG', 'NBN', 'NCL', 'NCOA3', 'NCOR1', 'NCOR2', 'NDN', 'NDRG1', 'NEDD8', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFE2L2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NFKBIB', 'NFYA', 'NFYB', 'NFYC', 'NGFR', 'NKX2-1', 'NLK', 'NLRC4', 'NME1', 'NOC2L', 'NOS3', 'NOTCH1', 'NOTCH3', 'NOTCH4', 'NOX4', 'NPM1', 'NQO1', 'NR1I2', 'NR2E1', 'NR3C1', 'NR4A1', 'NR4A2', 'NRAS', 'NUAK1', 'NUMB', 'NUPR1', 'OGG1', 'OLIG2', 'OPN1SW', 'OSGIN1', 'OTUB1', 'OTUB2', 'OTUD5', 'PADI4', 'PALB2', 'PARK2', 'PARK7', 'PARP1', 'PATZ1', 'PAX2', 'PAX3', 'PAX8', 'PBK', 'PBRM1', 'PCBP4', 'PCNA', 'PDCD4', 'PDCD5', 'PDGFRA', 'PDGFRB', 'PDLIM7', 'PER2', 'PERP', 'PGR', 'PHB', 'PHC1', 'PHC2', 'PHC3', 'PHF20', 'PHGDH', 'PI3', 'PIAS1', 'PIAS2', 'PIAS4', 'PIK3CA', 'PIN1', 'PKM', 'PLAGL1', 'PLAU', 'PLK1', 'PLK2', 'PLK3', 'PLK4', 'PMAIP1', 'PML', 'PMS2', 'POLI', 'POLK', 'POU4F1', 'POU4F2', 'POU5F1', 'PPARGC1A', 'PPARG', 'PPIF', 'PPM1D', 'PPP1R13B', 'PPP1R13L', 'PPP1R15A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R4', 'PPP2R5C', 'PRDM1', 'PRDM2', 'PRDX1', 'PRELID1', 'PRIMA1', 'PRKAA1', 'PRKAA2', 'PRKAB1', 'PRKAB2', 'PRKAG1', 'PRKAG2', 'PRKAG3', 'PRKCA', 'PRKCD', 'PRKCZ', 'PRKD1', 'PRKDC', 'PRKG1', 'PRMT1', 'PRMT5', 'PROM1', 'PSEN1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTBP1', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2', 'PTTG1', 'RABGGTA', 'RABGGTB', 'RAD17', 'RAD1', 'RAD50', 'RAD51', 'RAD9A', 'RAD9B', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP4', 'RBBP6', 'RBBP7', 'RBBP8', 'RBL1', 'RBL2', 'RBM38', 'RBPJ', 'RCHY1', 'RCOR1', 'RECQL4', 'RELA', 'REM1', 'REST', 'RET', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RFFL', 'RFWD2', 'RING1', 'RMI1', 'DROSHA', 'RNF20', 'RNF2', 'RNF34', 'RNF43', 'ROCK1', 'RPA1', 'RPA2', 'RPA3', 'RPL11', 'RPL22', 'RPL26', 'RPL5', 'RPRM', 'RPS14', 'RPS19', 'RPS27A', 'RPS27L', 'RPS3', 'RPS6KB1', 'RQCD1', 'RRAD', 'RRM2B', 'RRM2', 'RUNX2', 'RUNX3', 'S100A2', 'S100A4', 'S100A6', 'S100B', 'SALL4', 'SCO2', 'SDHC', 'SENP1', 'SENP3', 'SERPINB5', 'SERPINE1', 'SESN1', 'SESN2', 'SESN3', 'SETD2', 'SETD7', 'SETD8', 'SETDB1', 'SFN', 'SRSF1', 'SGK1', 'SHFM1', 'SHH', 'SHISA5', 'SIK1', 'SIN3A', 'SIN3B', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SKP2', 'SLC2A14', 'SLC2A1', 'SLC2A2', 'SLC2A3', 'SLC6A6', 'SLMO1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMG1', 'SMG7', 'SMYD2', 'SNAI1', 'SNAI2', 'SOCS1', 'SOCS3', 'SOD2', 'SORT1', 'SOX2', 'SOX4', 'SP100', 'SP1', 'SP3', 'SP7', 'SPATA18', 'SPP1', 'SQSTM1', 'SRC', 'SREBF1', 'SREBF2', 'SSRP1', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STEAP3', 'STK11', 'STMN1', 'STUB1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUMO4', 'SUPT16H', 'SUV39H1', 'SUZ12', 'SYK', 'SYP', 'TADA3', 'TAF10', 'TAF11', 'TAF12', 'TAF13', 'TAF15', 'TAF1L', 'TAF1', 'TAF2', 'TAF3', 'TAF4B', 'TAF4', 'TAF5', 'TAF6', 'TAF7L', 'TAF7', 'TAF9B', 'TBPL1', 'TBPL2', 'TBP', 'TCHP', 'TCP1', 'TDG', 'TERT', 'TET2', 'TFAM', 'TFAP2A', 'TFAP2C', 'TFDP1', 'TFF1', 'TGFB1', 'TGM2', 'THBS1', 'TIMP3', 'TLR3', 'TLR9', 'TMEM219', 'TNFAIP3', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF10C', 'TNFRSF10D', 'TNF', 'TNK2', 'TNKS1BP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOE1', 'TOP1', 'TOP2A', 'TOP3A', 'TOPBP1', 'TOPORS', 'TP53AIP1', 'TP53BP1', 'TP53BP2', 'TP53I3', 'TP53INP1', 'TP53RK', 'TP63', 'TP73', 'TPT1', 'TPX2', 'TRAF6', 'TRIAP1', 'TRIM24', 'TRIM28', 'TRIM29', 'TRIM32', 'TRIM59', 'TRIM8', 'TRRAP', 'TSC2', 'TTC5', 'TTK', 'TWIST1', 'TWIST2', 'TXN', 'TYMS', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2D1', 'UBE2E1', 'UBE2I', 'UBE2K', 'UBE2N', 'UBE2Q1', 'UBE2S', 'UBE3A', 'UBN1', 'UCHL1', 'UHRF1', 'USF1', 'USP10', 'USP15', 'USP24', 'USP3', 'USP42', 'USP7', 'UTP14A', 'VEGFA', 'VHL', 'VPRBP', 'VRK1', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WWOX', 'XAF1', 'XIAP', 'XPA', 'XPO1', 'XRCC1', 'XRCC5', 'XRCC6', 'YBX1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'YY1', 'YY2', 'ZBTB33', 'ZBTB7A', 'ZEB1', 'ZEB2', 'ZKSCAN4', 'ZNF148', 'ZNF274', 'ZNF385A', 'ZNF420', 'ZNF668', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 6.434063350069321e-15 NRMSE: 1.5462781422901518e-15 MAPE: 7.269359457309156e-12 Pearson Correlation: 0.31666797803807756 Spearman Correlation: 0.26685201443761586 Coefficient of Determination: -4.775742523262116 RMSE: 1.010908830516154 NRMSE: 0.3635185840972901 MAPE: 1484.9298320311882 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.23416389364396895, tolerance: 0.011010946742365387 positive)
Pearson Correlation: 0.9999792631720819 Spearman Correlation: 0.9999273313694013 Coefficient of Determination: 0.9999550564136399 RMSE: 0.0030357013977341694 NRMSE: 0.0007295605377875919 MAPE: 22.143448490981648 Pearson Correlation: 0.2479627406958772 Spearman Correlation: 0.2516973953760609 Coefficient of Determination: -4.017020024250988 RMSE: 0.9421737391269326 NRMSE: 0.3388017329378736 MAPE: 1145.7434427544347 Predictor: RandomForests Pearson Correlation: 0.6578300600149463 Spearman Correlation: 0.5691549846269923 Coefficient of Determination: 0.37486668057814176 RMSE: 0.3580234818259469 NRMSE: 0.08604265364718744 MAPE: 564.486580249894 Pearson Correlation: 0.49991780325241103 Spearman Correlation: 0.5225089443287664 Coefficient of Determination: 0.24724954793540155 RMSE: 0.36495018692417036 NRMSE: 0.13123455964765737 MAPE: 355.9936133058641 Protein: CTNNB1 Protein Interaction Partners Count: 992 x_train_column_count: 984 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACAN', 'ACP1', 'ACTA1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTN4', 'ACVR1B', 'ACVR1', 'ADAM10', 'ADCY7', 'ADIPOQ', 'AES', 'AFP', 'AHI1', 'AHR', 'AHSA1', 'AJAP1', 'AK9', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'ALPL', 'AMHR2', 'AMH', 'ANXA5', 'AP1M1', 'APC2', 'APCS', 'APC', 'APH1A', 'APH1B', 'AQP1', 'ARHGAP10', 'ARHGAP21', 'ARHGAP32', 'ARHGEF4', 'ARID1A', 'ARID2', 'ARMC7', 'ARMC8', 'ARVCF', 'ARX', 'AR', 'ASCL1', 'ASF1A', 'ASH2L', 'ASIP', 'ATF4', 'ATM', 'AURKA', 'AXIN1', 'AXIN2', 'BAG3', 'BCAR1', 'BCL2L1', 'BCL3', 'BCL6', 'BCL9L', 'BCL9', 'BDNF', 'BGLAP', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BMPR1B', 'BNIP2', 'BRAF', 'BRCA1', 'BRCA2', 'BRMS1L', 'BTRC', 'HILPDA', 'AK8', 'CA2', 'CA9', 'CABLES1', 'CACYBP', 'CALM1', 'CALM3', 'CARM1', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBLL1', 'CBL', 'CBY1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CD24', 'CD34', 'CD40', 'CD44', 'CDC27', 'CDC42', 'CDC73', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH16', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH26', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDHR5', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK8', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDON', 'CDX1', 'CDX2', 'CEBPA', 'CHD8', 'CHRD', 'CHUK', 'CITED1', 'CKAP5', 'CLCA1', 'CLDN3', 'CLDN5', 'COL1A1', 'COPS3', 'COPS5', 'COPS6', 'CREB1', 'CREBBP', 'CRKL', 'CRK', 'CRP', 'CRYAB', 'CSNK1A1L', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK2A3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNAL1', 'CTNNBIP1', 'CTNND1', 'CTNND2', 'CTTN', 'CUL1', 'CUL4A', 'CUL4B', 'CXCR4', 'CXXC4', 'DAB2', 'DACT1', 'DACT2', 'DACT3', 'DCT', 'DCX', 'DDB1', 'DDX39A', 'DDX3X', 'DDX5', 'DHODH', 'DHX9', 'DKK1', 'DKK2', 'DKK3', 'DKK4', 'DLG1', 'DLG2', 'DLG4', 'DLG5', 'DLGAP1', 'DLL4', 'DLX1', 'DNM2', 'DNMT1', 'DPYD', 'DSC1', 'DSC2', 'DSC3', 'DSG1', 'DSG2', 'DSG3', 'DSG4', 'DSP', 'DUSP6', 'DVL1', 'DVL2', 'DVL3', 'E2F3', 'ECM1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'ELAVL1', 'EMD', 'ENAH', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHB2', 'EPHB3', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EXOC3', 'EXOC4', 'EYA4', 'EZH2', 'EZR', 'F2RL2', 'FAF1', 'AMER1', 'FANCA', 'FASLG', 'FAS', 'FAT1', 'FAT4', 'FBXW11', 'FBXW7', 'FERMT2', 'FER', 'FGF10', 'FGF13', 'FGF2', 'FGF3', 'FGF4', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FLT3', 'FMN1', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC2', 'FOXG1', 'FOXL1', 'FOXL2', 'FOXM1', 'FOXN3', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FRAT1', 'FRAT2', 'FRZB', 'FSCN1', 'FSTL1', 'FSTL3', 'FURIN', 'FUS', 'FXR1', 'FYN', 'FZD10', 'FZD1', 'FZD2', 'FZD3', 'FZD4', 'FZD5', 'FZD6', 'FZD7', 'FZD8', 'FZD9', 'GAPDH', 'GATA2', 'GATA4', 'GCG', 'GDF2', 'GDNF', 'GFRA1', 'GJA1', 'GLI1', 'GLI2', 'GLI3', 'GLIS2', 'GLUL', 'GNA11', 'GNA12', 'GNA13', 'GNAQ', 'GNAS', 'GPC3', 'GRIA2', 'GRIP1', 'GSK3A', 'GSK3B', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HAS2', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC7', 'HERC5', 'HES7', 'HGF', 'HGS', 'HHEX', 'HIC1', 'HIF1A', 'HINT1', 'HIPK2', 'HIST1H1C', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HMGB1', 'HNF1A', 'HNF4A', 'HNRNPA1', 'HNRNPA2B1', 'HNRNPK', 'HNRNPM', 'HOXA10', 'HOXB4', 'HPGD', 'HRAS', 'HSP90AB1', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPD1', 'HTRA1', 'HTT', 'HUWE1', 'IBSP', 'IDH1', 'IDH2', 'IFNB1', 'IFRD1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP4', 'IHH', 'IKBKB', 'IL6', 'CXCL8', 'ILK', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IRF3', 'ISG15', 'ISL1', 'ITGAE', 'ITGB1', 'ITGB7', 'ITK', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'AJUBA', 'JUN', 'JUP', 'KANK1', 'KAT2A', 'KAT2B', 'KAT5', 'KCNN1', 'KCTD1', 'KDM1A', 'KDR', 'KIF18B', 'KIF3A', 'KIF5B', 'KIFC3', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KRAS', 'KREMEN1', 'KRIT1', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LATS2', 'LDB1', 'LDHB', 'LDLR', 'LEF1', 'LEO1', 'LGR4', 'LGR5', 'LGR6', 'LHCGR', 'LHX8', 'LIF', 'LIMA1', 'LMNA', 'LMNB1', 'LOX', 'LRP4', 'LRP5L', 'LRP5', 'LRP6', 'LRRFIP1', 'LRRK2', 'LZTFL1', 'MACF1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8IP1', 'MAPK8', 'MAPK9', 'MDFIC', 'MDFI', 'MDK', 'MDM2', 'MED12', 'MED1', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'KMT2D', 'MLLT10', 'MLLT11', 'MLLT4', 'MLLT6', 'KMT2A', 'MME', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP25', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MRAP', 'MSH2', 'MSH6', 'MSN', 'MSX1', 'MSX2', 'MTDH', 'MTOR', 'MUC13', 'MUC1', 'MUTYH', 'MYCN', 'MYC', 'MYF5', 'MYO1D', 'MYO6', 'MYO7A', 'MYOD1', 'MYOG', 'NANOG', 'NCAM1', 'NCCRP1', 'NCOA2', 'NCSTN', 'NDP', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEURL2', 'NF1', 'NF2', 'NFAT5', 'NFKB1', 'NIT1', 'NKD1', 'NKX2-5', 'NLK', 'NME1', 'NOG', 'NONO', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR0B1', 'NR4A1', 'NR4A2', 'NR5A1', 'NR5A2', 'NRAS', 'NRIP1', 'NTRK1', 'NTRK2', 'NTRK3', 'NUDT5', 'NUMB', 'NUP153', 'NUTF2', 'OTX2', 'PAK1', 'PAK2', 'PAK3', 'PANK4', 'PARD3', 'PARD6A', 'PARK2', 'PARP1', 'PAX3', 'PAX6', 'PAX7', 'PAX8', 'PDGFRA', 'PDGFRB', 'PECAM1', 'PGK1', 'PGR', 'PHB', 'JADE1', 'PI3', 'PICK1', 'PIK3CA', 'PIK3R1', 'PIK3R2', 'PIN1', 'PIP5K1A', 'PIP5K1C', 'PITX2', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAG1', 'PLEKHA7', 'PLK1', 'PML', 'PMS2', 'POLE', 'PORCN', 'POTEF', 'POU5F1', 'PPARD', 'PPARG', 'PPM1A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R2B', 'PPP2R5A', 'PPP2R5B', 'PPP2R5C', 'PPP2R5D', 'PPP2R5E', 'PRKACA', 'PRKACB', 'PRKACG', 'PRKAR1A', 'PRKCA', 'PRKCG', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRL', 'PRMT1', 'PROC', 'PROM1', 'PROP1', 'PSEN1', 'PSEN2', 'PSENEN', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTEN', 'PTGES3', 'PTGS2', 'PTH1R', 'PTH', 'PTK2', 'PTK7', 'PTMA', 'PTN', 'PTPN11', 'PTPN13', 'PTPN1', 'PTPN6', 'PTPRB', 'PTPRC', 'PTPRF', 'PTPRG', 'PTPRJ', 'PTPRK', 'PTPRM', 'PTPRU', 'PTPRZ1', 'PVRL1', 'PVRL2', 'PXN', 'PYGO1', 'PYGO2', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RALGDS', 'RANBP3', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RAPGEF2', 'RAPGEF6', 'RAPSN', 'RARA', 'RARB', 'RARG', 'RARS', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP5', 'RBMX', 'RBPJ', 'RBX1', 'RELA', 'REM1', 'RET', 'RHOA', 'RIPK2', 'RNF220', 'RNF43', 'ROBO1', 'ROCK1', 'ROCK2', 'ROR2', 'RPRD1A', 'RPS27A', 'RPSA', 'RSPO1', 'RSPO2', 'RSPO3', 'RSPO4', 'RUNX2', 'RUNX3', 'RUVBL1', 'RUVBL2', 'RXRA', 'RYK', 'S100A4', 'S100A6', 'SALL1', 'SALL4', 'SATB1', 'SCRIB', 'SDHC', 'SERPINE1', 'SETD2', 'SETD7', 'SFN', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHFM1', 'SHH', 'SIAH1', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT6', 'SKP1', 'SLC6A3', 'SLC9A3R1', 'SLCO1B3', 'SLCO2A1', 'SLIT1', 'SLK', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD5', 'SMAD7', 'SMAD9', 'SMARCA2', 'SMARCA4', 'SMARCA5', 'SMARCB1', 'SMO', 'SMURF1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNX1', 'SOST', 'SOX10', 'SOX13', 'SOX17', 'SOX1', 'SOX2', 'SOX3', 'SOX4', 'SOX6', 'SOX7', 'SOX8', 'SOX9', 'SP1', 'SP7', 'SPAG9', 'SPATA13', 'SPEN', 'SPN', 'SPP1', 'SRC', 'STAT3', 'STK11', 'STRAP', 'STX4', 'SUFU', 'SUV39H1', 'SYP', 'TADA3', 'TAX1BP3', 'TAZ', 'TBL1XR1', 'TBL1X', 'TBX5', 'TBX6', 'TCF12', 'TCF3', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TFAP2A', 'TFCP2', 'TFF1', 'TFF2', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBR1', 'TGFBR2', 'TGM2', 'TJP1', 'TJP2', 'TLE1', 'TLE2', 'TLE3', 'TLE4', 'TNFRSF11B', 'TNFSF11', 'TNF', 'TNIK', 'TNKS2', 'TNKS', 'TNS1', 'TOB1', 'TOP2A', 'TP53', 'TRAF4', 'TRIM33', 'TRIM37', 'TRIP10', 'TRRAP', 'TSC2', 'TUBA1A', 'TWIST1', 'TYMS', 'T', 'UBA52', 'UBB', 'UBC', 'UBE2B', 'UBE2R2', 'UBE3A', 'UBR5', 'UCHL1', 'UMPS', 'UPRT', 'USP4', 'USP7', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VAV2', 'VAV3', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VHL', 'VIM', 'WDR64', 'WDTC1', 'WHSC1', 'WIF1', 'WISP1', 'WLS', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'WWTR1', 'XPO1', 'YAP1', 'YARS', 'YEATS4', 'YES1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'ZAP70', 'ZAR1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZIC3', 'ZNRF3', 'ZYX', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.149645473601439e-14 NRMSE: 4.332477726588547e-15 MAPE: 1.4859744841814034e-11 Pearson Correlation: 0.10432846324792117 Spearman Correlation: 0.13504048385523365 Coefficient of Determination: -4.81262979058275 RMSE: 1.8105138240291803 NRMSE: 0.44919213616562803 MAPE: 991.4373387418689 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.4591796999948534, tolerance: 0.02918679256026189 positive)
Pearson Correlation: 0.9999849861769243 Spearman Correlation: 0.9999619317890892 Coefficient of Determination: 0.9999678164776651 RMSE: 0.004182373650554965 NRMSE: 0.0008429315860602142 MAPE: 4.491934121393988 Pearson Correlation: 0.1778709088020328 Spearman Correlation: 0.23150424348844018 Coefficient of Determination: -4.114812567598863 RMSE: 1.6983624346578494 NRMSE: 0.4213671499672132 MAPE: 1175.9880543640156 Predictor: RandomForests Pearson Correlation: 0.6841986264785491 Spearman Correlation: 0.6820702465624745 Coefficient of Determination: 0.45392154713139776 RMSE: 0.544795564573407 NRMSE: 0.1098001823111851 MAPE: 366.845194298559 Pearson Correlation: 0.5488929367708912 Spearman Correlation: 0.48712320749195204 Coefficient of Determination: 0.29198761781243854 RMSE: 0.6318819358306932 NRMSE: 0.156771184397036 MAPE: 224.60700344906942 Protein: CCNE1 Protein Interaction Partners Count: 350 x_train_column_count: 347 x_train columns: ['ABL1', 'AKT1', 'AKT2', 'AKT3', 'ALDH18A1', 'ANAPC10', 'ANAPC13', 'ANAPC1', 'ANAPC2', 'ANAPC4', 'ANAPC5', 'ANAPC7', 'ANXA5', 'ARID1A', 'AR', 'ATM', 'AURKA', 'AURKB', 'BARD1', 'BCL2L1', 'BIRC5', 'BRCA1', 'BRCA2', 'BTG2', 'BTRC', 'BUB1B', 'BUB1', 'BUB3', 'RGCC', 'MLIP', 'CABLES1', 'CALM1', 'CAPRIN1', 'CASP3', 'CASP9', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNF', 'CCNG1', 'CCNH', 'CCNK', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CDC16', 'CDC20', 'CDC23', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC26', 'CDC27', 'CDC45', 'CDC6', 'CDC7', 'CDCA2', 'CDCA5', 'CDCA8', 'CDH1', 'CDK12', 'CDK13', 'CDK14', 'CDK15', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CENPA', 'CENPE', 'CHAF1A', 'CHD1L', 'CHEK1', 'CHEK2', 'CINP', 'CKS1B', 'CKS2', 'COPS5', 'CREBBP', 'CSK', 'CTNNB1', 'CUL1', 'CUL3', 'CUL4B', 'DBF4B', 'DBF4', 'DGCR8', 'DICER1', 'DTL', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'EBNA1BP2', 'ECT2', 'EGFR', 'EGF', 'ELAVL1', 'ELSPBP1', 'EP400', 'ERBB2', 'ERBB3', 'ERBB4', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM58A', 'FAM83H', 'FBXO5', 'FBXW7', 'FEN1', 'FGFR1', 'FGFR2', 'FGFR3', 'FOXM1', 'FZR1', 'GAPDH', 'GLI1', 'GMNN', 'GSK3B', 'H1F0', 'HDAC1', 'HEATR3', 'HERC5', 'HIST1H1A', 'HIST1H1B', 'HIST1H4A', 'HRAS', 'IFNAR1', 'IGF1R', 'IGF1', 'ITPKB', 'JUN', 'KIF11', 'KIF20A', 'KIF23', 'KIF2C', 'KPNA2', 'KRAS', 'LATS2', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'GMNC', 'MAD2L1', 'MAPK3', 'MATK', 'MAX', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDM2', 'MEGF11', 'MELK', 'MKI67', 'KMT2D', 'KMT2B', 'MNAT1', 'MRE11A', 'MTOR', 'MYBL2', 'MYC', 'NBN', 'NF1', 'NFYB', 'NMI', 'NOTCH1', 'NOTCH3', 'NPAT', 'NRAS', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PARK2', 'PARP1', 'PCBP4', 'PCNA', 'PIK3CA', 'PIK3R1', 'PKMYT1', 'PLK1', 'PLK4', 'POLA1', 'POLD1', 'PPP1R1C', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R4', 'PRC1', 'PRKAR1A', 'PRKAR2A', 'PRMT5', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB10', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSMF1', 'PTEN', 'PTGDR', 'PTK6', 'PTTG1', 'RAD51', 'RAD54L', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RBX1', 'REL', 'REM1', 'RHOA', 'RHOBTB3', 'RINT1', 'RNASE1', 'RPRD1A', 'RPS27A', 'RRM1', 'RRM2', 'RRN3', 'RSF1', 'SHFM1', 'SKP1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'ST8SIA1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STK3', 'STK4', 'TARBP1', 'TCP1', 'TERF1', 'TERT', 'TFDP1', 'TK1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TPX2', 'TTK', 'TUBG1', 'TYMS', 'UBA52', 'UBB', 'UBC', 'UBE2C', 'UBE2QL1', 'UBE2S', 'UHRF2', 'WEE1', 'WEE2', 'XIAP', 'YAP1', 'ZNF217', 'ZNF33A', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.9600859906029507 Spearman Correlation: 0.8662267544166397 Coefficient of Determination: 0.9217651093520491 RMSE: 0.13528524503270575 NRMSE: 0.032648416881701316 MAPE: 30.405595072708053 Pearson Correlation: 0.42559319189842915 Spearman Correlation: 0.324212271973466 Coefficient of Determination: -1.074458489383011 RMSE: 0.7734976956787167 NRMSE: 0.27551120059794004 MAPE: 96.35319060126558 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 5.120999545103573, tolerance: 0.012562459394718587 positive)
Pearson Correlation: 0.9594456707831593 Spearman Correlation: 0.8630468866692879 Coefficient of Determination: 0.9205354201275713 RMSE: 0.13634430059508432 NRMSE: 0.03290399898522681 MAPE: 30.645398821718604 Pearson Correlation: 0.5576770653749622 Spearman Correlation: 0.3489659545410205 Coefficient of Determination: -0.12215666523820357 RMSE: 0.5688966763179973 NRMSE: 0.20263461311415754 MAPE: 90.19071382603154 Predictor: RandomForests Pearson Correlation: 0.8596874273082401 Spearman Correlation: 0.7210960464713698 Coefficient of Determination: 0.7320514696254783 RMSE: 0.2503663064140619 NRMSE: 0.060420953836923974 MAPE: 54.40166636566519 Pearson Correlation: 0.845046857639206 Spearman Correlation: 0.7078185738575904 Coefficient of Determination: 0.7100918169730611 RMSE: 0.28915911496185553 NRMSE: 0.10299523239959235 MAPE: 44.09579052171135 Protein: CCND1 Protein Interaction Partners Count: 857 x_train_column_count: 849 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTL6B', 'AFP', 'AHR', 'AKAP12', 'AKAP8', 'AKR1B10', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDOA', 'ALK', 'ANO1', 'ANXA5', 'APAF1', 'APC', 'APEX1', 'AREG', 'ARHGEF2', 'ARID1A', 'ARID1B', 'ARID2', 'ARID4A', 'AR', 'ASIP', 'ATF2', 'ATF3', 'ATF4', 'ATM', 'ATXN1', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'B2M', 'BANP', 'BARX2', 'BAX', 'BCAR1', 'BCAR3', 'BCCIP', 'BCL2A1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL3', 'BCL6', 'BCL9', 'BECN1', 'BGLAP', 'BHLHE40', 'BIRC2', 'BIRC3', 'BIRC5', 'BMI1', 'BMP4', 'BMP6', 'BRAF', 'BRCA1', 'BRCA2', 'BRD2', 'BRD4', 'BTC', 'BTG2', 'BTRC', 'RGCC', 'COPRS', 'CA9', 'CARD11', 'CARM1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBFB', 'CCDC62', 'CCL2', 'CCL5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNC', 'CCND2', 'CCND3', 'CCNDBP1', 'CCNE1', 'CCNE2', 'CCNG2', 'CCNH', 'CCNK', 'CCNL1', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CD19', 'CD22', 'CD24', 'CD34', 'CD38', 'CD44', 'CD5', 'CD79A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC6', 'CDC73', 'CDCA7L', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK12', 'CDK13', 'CDK14', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK20', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CDX2', 'CENPE', 'CEP57', 'CFLAR', 'CHEK1', 'CHEK2', 'CHKA', 'CHUK', 'CKS1B', 'CKS2', 'CLCN3', 'COL1A1', 'CR2', 'CREB1', 'CREBBP', 'CRKL', 'CRYAB', 'CSF2', 'CTBP1', 'CTGF', 'CTNNB1', 'CTNND1', 'CTTN', 'CUL1', 'CUL3', 'CUL7', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'CYR61', 'DACH1', 'DAXX', 'DDIT3', 'DDX53', 'DECR1', 'DHFR', 'DICER1', 'DKK1', 'DKK3', 'DLL1', 'DMTF1', 'DND1', 'DNMT1', 'DNMT3A', 'DNTT', 'DVL1', 'DVL2', 'DYRK1A', 'DYRK1B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EDN1', 'EEF1A1', 'EGFR', 'EGF', 'EGLN2', 'EGR1', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF3I', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4E', 'EIF4G1', 'ELAVL1', 'ELSPBP1', 'EP300', 'EPCAM', 'EPHA2', 'EPHA7', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EWSR1', 'EYA1', 'EZH2', 'FABP4', 'FADD', 'FAM58A', 'FAM83H', 'FASLG', 'FAT1', 'FBXO31', 'FBXO4', 'FBXW7', 'FBXW8', 'FGF13', 'FGF19', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FHL2', 'FIGF', 'FLCN', 'FLNA', 'FLT1', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXC1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FRZB', 'FSTL3', 'FZD1', 'FZD2', 'FZD7', 'FZD9', 'FZR1', 'GADD45A', 'GAL', 'GAPDH', 'GAST', 'GATA3', 'GATA4', 'GDF15', 'GDF2', 'GGNBP2', 'GGT1', 'GIT1', 'GJA1', 'GJB1', 'GLI1', 'GLI2', 'GLI3', 'GLTSCR2', 'GNB2L1', 'GPER1', 'GRB2', 'GREB1', 'GRM4', 'GRP', 'GSK3B', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HBEGF', 'HBZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC4', 'HEXIM1', 'HEY1', 'HGF', 'HIF1A', 'HIST1H2AA', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AH', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AC', 'HIST2H2BE', 'HIST2H4A', 'HIST4H4', 'HMGA2', 'HMOX1', 'HNF1A', 'HNF4A', 'HNRNPD', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB8', 'ICAM1', 'ID1', 'ID2', 'IFNAR1', 'IFNB1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP3', 'IGFBP5', 'IHH', 'IKBKB', 'IL10', 'IL17A', 'IL2', 'IL4', 'IL6', 'IL7', 'CXCL8', 'ILK', 'INSM1', 'INS', 'IRF1', 'IRS1', 'ISG15', 'ITGB1', 'ITPKB', 'ITPKC', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUNB', 'JUND', 'JUN', 'KAT2A', 'KAT2B', 'KDM1A', 'KDM5B', 'KDR', 'KHDRBS1', 'KIF18B', 'KIN', 'KITLG', 'KIT', 'KLF13', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KRAS', 'KRT10', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LDB3', 'LEF1', 'LEP', 'LGALS3', 'LGR5', 'LIMK2', 'LIMS1', 'LIN28B', 'LMNA', 'LMNB1', 'LOX', 'LRP5', 'LRP6', 'LYN', 'MAFB', 'MAF', 'MAML1', 'MAML2', 'MAML3', 'MAMLD1', 'MAP2K1', 'MAP2K2', 'MAP2K4', 'MAP2K7', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDK', 'MDM2', 'MDM4', 'MEN1', 'MET', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'MLXIPL', 'MME', 'MMP11', 'MMP14', 'MMP15', 'MMP1', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MNAT1', 'MOV10', 'MSH2', 'MST1', 'MTOR', 'MUC1', 'MYBL2', 'MYB', 'MYCN', 'MYC', 'MYEOV', 'MYF5', 'MYOD1', 'MYOG', 'NACA2', 'NADSYN1', 'NANOG', 'NCAM1', 'NCOA1', 'NCOA3', 'NCOR1', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NGF', 'NKX2-1', 'NME1-NME2', 'NME1', 'NME2', 'NMI', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NQO1', 'NR0B2', 'NR1H3', 'NR2E1', 'NR3C1', 'NR4A3', 'NRAS', 'NRF1', 'NUDT21', 'ODC1', 'ORAI1', 'ORAOV1', 'ORC4', 'PAK1', 'PAK4', 'PARK2', 'PARP1', 'PAX2', 'PAX5', 'PAX6', 'PBRM1', 'PBX3', 'PCNA', 'PDCD4', 'PDGFRA', 'PDGFRB', 'PDZK1', 'PECAM1', 'PELP1', 'PGR', 'PI3', 'PI4K2A', 'PIK3CA', 'PIK3R1', 'PKLR', 'PKM', 'PLAUR', 'PLAU', 'PLK1', 'PMAIP1', 'POLR2A', 'POTEF', 'POU2F1', 'POU5F1', 'PPARG', 'PPP2R4', 'PRDM5', 'PRKACA', 'PRL', 'PRMT5', 'PRNP', 'PROM1', 'PSAT1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTCHD3', 'PTEN', 'PTF1A', 'PTGS2', 'PTHLH', 'PTH', 'PTK2', 'PTK6', 'PTPN11', 'PTPRCAP', 'PTPRC', 'PXN', 'RAD51', 'RAF1', 'RALA', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RBX1', 'RCC1', 'RELA', 'RELB', 'REL', 'REM1', 'RET', 'RHEB', 'RHOA', 'RHOC', 'RICTOR', 'RNASE1', 'DROSHA', 'RND3', 'RNMT', 'ROCK1', 'RPRD1B', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KA6', 'RPS6KB1', 'RPS6', 'RPTOR', 'RREB1', 'RSF1', 'RUNX1', 'RUNX2', 'RUNX3', 'SDC1', 'SDHC', 'SENP1', 'SERPINE1', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHC1', 'SHFM1', 'SHH', 'SIRT1', 'SIX1', 'SIX3', 'SKP1', 'SKP2', 'SLC25A16', 'SLC25A6', 'SLC2A1', 'SLC35B2', 'SLC39A4', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMO', 'SNAI1', 'SNAI2', 'SNCA', 'SNIP1', 'SNW1', 'SNX33', 'SOCS3', 'SOX11', 'SOX17', 'SOX2', 'SOX4', 'SOX6', 'SOX9', 'SP1', 'SPN', 'SPP1', 'SPRY1', 'SRC', 'SREBF1', 'STAT1', 'STAT3', 'STAT4', 'STAT5A', 'STAT5B', 'STAT6', 'STC2', 'STIM1', 'STK11', 'STK24', 'STMN1', 'SUFU', 'SULF2', 'SUV39H1', 'TAF1', 'TBP', 'TBX2', 'TCEAL7', 'TCF4', 'TCF7L2', 'TCF7', 'TERT', 'TET3', 'TFDP1', 'TFF1', 'TGFA', 'TGFB1', 'TGFBR2', 'THBS1', 'THRA', 'THRB', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLR9', 'TM4SF1', 'TMPRSS4', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF8', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP2A', 'TP53', 'TP63', 'TP73', 'TRPV2', 'TSC22D3', 'TSC2', 'TWIST1', 'TXN', 'TYMS', 'UBA52', 'UBA7', 'UBB', 'UBC', 'UBE2C', 'UBTF', 'URGCP', 'USP18', 'USP2', 'USP9X', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VIP', 'VRK1', 'WDR77', 'WDTC1', 'WEE1', 'WHSC1', 'WIF1', 'WISP1', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'XBP1', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YY1', 'ZBTB17', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.5997398468461217e-14 NRMSE: 9.61717333473279e-15 MAPE: 2.831439307466787e-11 Pearson Correlation: -0.09033219981316973 Spearman Correlation: 0.008233343088479174 Coefficient of Determination: -12.86658037634473 RMSE: 0.8748934840467112 NRMSE: 0.6231080024262943 MAPE: 5878.0124191540945 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.18173924263305802, tolerance: 0.0030646775987981157 positive)
Pearson Correlation: 0.9998301354690078 Spearman Correlation: 0.9997058964326522 Coefficient of Determination: 0.99962786861435 RMSE: 0.00460843433992345 NRMSE: 0.0027704574550765594 MAPE: 7.358910815580588 Pearson Correlation: -0.06689856319884474 Spearman Correlation: 0.05351673007511463 Coefficient of Determination: -10.24162852326377 RMSE: 0.7877440116442581 NRMSE: 0.5610392653155505 MAPE: 6888.28431529481 Predictor: RandomForests Pearson Correlation: 0.5704725542385461 Spearman Correlation: 0.5547056754820439 Coefficient of Determination: 0.26297215871093493 RMSE: 0.20509128252867684 NRMSE: 0.12329494807605827 MAPE: 325.7250287173021 Pearson Correlation: 0.49912157464398055 Spearman Correlation: 0.46262315871622284 Coefficient of Determination: 0.22531475351959973 RMSE: 0.20679171639625385 NRMSE: 0.1472791553161172 MAPE: 1074.6486839065683 Protein: ERBB2 Protein Interaction Partners Count: 663 x_train_column_count: 657 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACPP', 'ACTA2', 'ACTB', 'ACTG1', 'ADAM10', 'ADAM17', 'ADRB2', 'AFP', 'AGRN', 'AKT1S1', 'AKT1', 'AKT2', 'ALB', 'ALDH1A1', 'ALK', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'ANO1', 'ANXA2', 'ANXA5', 'AP2B1', 'APP', 'AREG', 'ARHGEF11', 'ARHGEF12', 'ARID1A', 'ARL6IP5', 'AR', 'ATM', 'ATP2B2', 'AURKB', 'AXIN1', 'BAG1', 'BARD1', 'BCAR1', 'BCAR3', 'BCAS1', 'BCL2L11', 'BCL2L1', 'BDNF', 'BECN1', 'BEST1', 'BIRC5', 'BLNK', 'BMI1', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BSG', 'BTC', 'MIEN1', 'CA9', 'CALU', 'CARTPT', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAV1', 'CBLB', 'CBLC', 'CBL', 'CCL27', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD19', 'CD22', 'CD247', 'CD24', 'CD274', 'CD28', 'CD33', 'CD34', 'CD44', 'CD46', 'CD52', 'CD68', 'CD6', 'CD80', 'CD82', 'CDC37', 'CDC42', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK4', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CEACAM5', 'CEP70', 'CHEK2', 'CHGA', 'CHKA', 'CHKB', 'CISH', 'CLDN3', 'CLDN4', 'CLDN7', 'CLTC', 'CNN1', 'COPS5', 'CPNE3', 'CREB1', 'CRKL', 'CRK', 'YBX3', 'CSF1', 'CSF2', 'CSF3', 'CSK', 'CSPG4', 'CTAG1B', 'CTLA4', 'CTNNB1', 'CTNND1', 'CTSB', 'CTSD', 'CTTN', 'CUL5', 'CXCL12', 'CXCR1', 'CXCR4', 'CYCS', 'CYP19A1', 'CYTIP', 'DCN', 'DDX41', 'DDX53', 'DHH', 'DIAPH1', 'DICER1', 'DLG4', 'DMTF1', 'DNAJA3', 'DNM2', 'DNMT1', 'DOCK1', 'DOCK7', 'DUSP6', 'E2F1', 'E2F3', 'EEA1', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EGFR', 'EGF', 'EIF3A', 'EIF4EBP1', 'EIF4E', 'ELAVL1', 'ELF3', 'EML4', 'ENO2', 'EP300', 'EPCAM', 'EPGN', 'EPHA2', 'EPS15', 'EPX', 'ERAL1', 'ERBB2IP', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ERRFI1', 'ESCO1', 'ESR1', 'ESR2', 'ESRRB', 'ETS1', 'ETS2', 'ETV4', 'ETV6', 'EZH2', 'EZR', 'FASLG', 'FASN', 'FBXW7', 'FCGR1A', 'FCGR1B', 'FCGRT', 'FGF10', 'FGF13', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FIGF', 'FLT1', 'FLT3LG', 'FN1', 'FOLH1', 'FOLR1', 'FOS', 'FOXA1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXP3', 'FREM2', 'FSIP1', 'FYN', 'GAB1', 'GABPB1', 'GAPDH', 'GATA3', 'GATA4', 'GDF2', 'GLI1', 'GLI2', 'GLS', 'GNA11', 'GNAQ', 'GNAS', 'GNRH1', 'GPER1', 'GRAP2', 'GRB2', 'GRB7', 'GSTP1', 'GZMB', 'H2AFX', 'H2AFY', 'HBEGF', 'HDAC1', 'HDAC6', 'HEATR6', 'HGF', 'HIF1A', 'HK1', 'HLA-A', 'HMGA2', 'HNF4A', 'HOXB7', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPG2', 'ICAM1', 'ID1', 'IDH1', 'IDH2', 'IFNG', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IHH', 'IL10', 'IL2', 'IL4', 'IL6R', 'IL6ST', 'IL6', 'CXCL8', 'ILK', 'INPP4B', 'INS', 'IQGAP1', 'IQSEC1', 'IRS1', 'ITGA5', 'ITGA6', 'ITGAV', 'ITGB1', 'ITGB3', 'ITGB4', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JUN', 'JUP', 'KDR', 'KITLG', 'KLK3', 'KLRK1', 'KRAS', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'L1CAM', 'LAMP1', 'LCN2', 'LDHA', 'LEP', 'LIN28A', 'LIN7A', 'LIN7B', 'LIN7C', 'LINGO1', 'LOX', 'LRIG1', 'LRPPRC', 'MAGEA1', 'MAGEA3', 'MAGED4B', 'MAGED4', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK8', 'MATK', 'MCL1', 'MDK', 'MDM2', 'MEMO1', 'MET', 'MGMT', 'MKI67', 'MLANA', 'MLH1', 'KMT2C', 'MME', 'MMP11', 'MMP14', 'MMP16', 'MMP1', 'MMP2', 'MMP7', 'MMP9', 'MPP1', 'MRAP', 'MRAS', 'MSH2', 'MSH6', 'MSLN', 'MTA1', 'MTOR', 'MUC13', 'MUC16', 'MUC1', 'MUC4', 'MUC6', 'MUCL1', 'MYBL2', 'MYCN', 'MYC', 'NANOG', 'NCAM1', 'NCL', 'NCOA1', 'NCOA3', 'NCOR1', 'NDRG1', 'NF1', 'NF2', 'NFE2L2', 'NGF', 'NISCH', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NR1H4', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NRP1', 'NTF3', 'NTF4', 'OPCML', 'OSMR', 'PA2G4', 'PADI2', 'PAK1', 'PALB2', 'PAQR3', 'PARP1', 'PAX2', 'PCSK9', 'PDCD1LG2', 'PDCD1', 'PDCD4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PDGFRA', 'PDPN', 'PECAM1', 'PELP1', 'PEPD', 'PFKFB3', 'PGAP3', 'PGF', 'PGR', 'PI3', 'PIK3C2A', 'PIK3C2B', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIN1', 'PIP', 'PLAUR', 'PLAU', 'PLCG1', 'PLCG2', 'PLEK', 'PLG', 'PLXNB1', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPP3CA', 'PRDM10', 'PRF1', 'PRKACA', 'PRL', 'PROM1', 'PSCA', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'PTPN1', 'PTPRC', 'PTPRO', 'PTPRU', 'PTS', 'PXN', 'RAB25', 'RAD51', 'RAF1', 'RANBP2', 'RARA', 'RASA1', 'RASA2', 'RASSF1', 'RB1', 'RBPJ', 'RDX', 'RECK', 'REM1', 'REN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'S100A14', 'SCGB2A2', 'SCUBE2', 'SDC1', 'SDHC', 'SEMA3D', 'SEMA4D', 'SERPINB5', 'SERPINE1', 'SFRP1', 'PEAK1', 'SH3BGRL3', 'SH3BGRL', 'SH3TC2', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SIAH2', 'PMEL', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC4A7', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SMUG1', 'SMYD3', 'SNAI1', 'SNAI2', 'SOCS1', 'SOS1', 'SOX10', 'SOX2', 'SOX9', 'SP3', 'SPP1', 'SPRY2', 'SRCIN1', 'SRC', 'STARD3', 'STAT1', 'STAT2', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STOM', 'STUB1', 'SYP', 'TAGLN', 'TBX1', 'TERT', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TFRC', 'TGFA', 'TGFB1', 'THBS1', 'THRA', 'TIMP1', 'TJP1', 'TMPRSS2', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF4', 'TNFRSF8', 'TNFRSF9', 'TNFSF11', 'TNF', 'TNS1', 'TNS3', 'TNS4', 'TOB1', 'TOP1', 'TOP2A', 'TP53', 'TP63', 'TSC2', 'TWIST1', 'TYMS', 'TYR', 'UBA52', 'UBB', 'UBC', 'USP2', 'USP9X', 'VAV1', 'VAV2', 'VAV3', 'VCL', 'VEGFA', 'VEGFB', 'VEGFC', 'VIM', 'WASL', 'WDFY2', 'WDTC1', 'WNT10A', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7B', 'WNT9A', 'WNT9B', 'WT1', 'WWOX', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YES1', 'YY1', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 1.1935158225481716e-13 NRMSE: 2.0333506355489577e-14 MAPE: 1.0003774098515527e-10 Pearson Correlation: 0.19122581098377484 Spearman Correlation: 0.34589796117451965 Coefficient of Determination: -200.30071868103568 RMSE: 12.869134349937704 NRMSE: 2.3862663359795486 MAPE: 3350.2114862766844 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 1.1760486327488329, tolerance: 0.05577498909165362 positive)
Pearson Correlation: 0.9997811965725593 Spearman Correlation: 0.999236930931091 Coefficient of Determination: 0.9995598509907659 RMSE: 0.021381219325086624 NRMSE: 0.003642642609517799 MAPE: 32.3116802721195 Pearson Correlation: 0.28053180748545364 Spearman Correlation: 0.4675885279484929 Coefficient of Determination: -34.52588029291424 RMSE: 5.406286988371341 NRMSE: 1.0024637471484037 MAPE: 4082.3717638134704 Predictor: RandomForests Pearson Correlation: 0.8592275065106486 Spearman Correlation: 0.7016416755316447 Coefficient of Determination: 0.7329230976900414 RMSE: 0.5266847811685238 NRMSE: 0.08972942078275274 MAPE: 493.83700180961495 Pearson Correlation: 0.808275898810776 Spearman Correlation: 0.690173843290221 Coefficient of Determination: 0.6477535983426582 RMSE: 0.5383317006035483 NRMSE: 0.09982045255025929 MAPE: 358.447817975373 Protein: ERBB3 Protein Interaction Partners Count: 245 x_train_column_count: 247 x_train columns: ['ADAM17', 'AGRN', 'AGTR2', 'AKT1', 'AKT2', 'AKT3', 'ALAS2', 'ALB', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'APIP', 'AREG', 'AR', 'BAMBI', 'BDNF', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BTC', 'CADM4', 'CASK', 'CASP3', 'CBLB', 'CBLC', 'CBL', 'CCND1', 'CCNE1', 'CD44', 'CD82', 'CDC42', 'CDH1', 'CDK4', 'CDK5', 'CDKN1B', 'CDKN2A', 'CLEC16A', 'COMMD5', 'COQ7', 'CRKL', 'CRK', 'CRYZL1', 'CSF1', 'CSK', 'CSPG5', 'CTNNB1', 'DCN', 'DHH', 'DOCK7', 'DUSP6', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EIF4EBP1', 'EIF4E', 'EML4', 'EPCAM', 'EPGN', 'EPN1', 'ERBB2IP', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'ESR2', 'FBXO9', 'FGF10', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FIGF', 'FKBP14', 'FLNA', 'FLT3LG', 'FN1', 'FOXA1', 'FOXO3', 'FREM2', 'FTSJ1', 'GAB1', 'GAPDH', 'GLE1', 'GRB2', 'GRB7', 'GRHL2', 'HBEGF', 'HGF', 'HGS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPG2', 'IGF1', 'IGF2', 'IL6ST', 'ILK', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'ITPKB', 'JAK1', 'JAK2', 'JUN', 'KDR', 'KITLG', 'KRAS', 'L1CAM', 'LAMA1', 'LAMB1', 'LAMC2', 'LIN7A', 'LIN7B', 'LIN7C', 'LRIG1', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARCH7', 'MDM2', 'MET', 'MITF', 'MMP9', 'MRPL49', 'MTOR', 'MUC1', 'MUC4', 'MYC', 'N4BP1', 'NDRG1', 'NEDD4L', 'NEDD4', 'NF1', 'NGF', 'NICN1', 'NOTCH1', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NTF3', 'NTF4', 'OAT', 'PA2G4', 'PARK7', 'PCSK9', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PGR', 'PI3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIP5K1C', 'PLCG1', 'PLCG2', 'PPP1R9A', 'PRKACA', 'PTEN', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN22', 'PTPN2', 'RASA1', 'RASA2', 'REM1', 'RGS4', 'RHOA', 'RHOC', 'RNF41', 'ROR1', 'RRAS2', 'SH2B3', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SLC25A16', 'SMAD4', 'SNAI2', 'SOS1', 'SOX10', 'SOX2', 'SPARC', 'SPRY2', 'SRC', 'STAT3', 'STAT5A', 'STAT5B', 'SYN3', 'TCF7L2', 'TGFA', 'TMEFF2', 'TNFRSF13C', 'TNS1', 'TP53', 'USP8', 'VAV1', 'VAV2', 'VAV3', 'VEGFA', 'VEGFB', 'VEGFC', 'WNT1', 'WNT5A', 'ZEB1', 'ZNF217', 'KRBOX4', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.7535918580803058 Spearman Correlation: 0.7441165627330231 Coefficient of Determination: 0.567900688564928 RMSE: 0.30181105643162476 NRMSE: 0.08145014166397913 MAPE: 167.6485439399057 Pearson Correlation: 0.20541522121317546 Spearman Correlation: 0.26358680078402286 Coefficient of Determination: -2.9381873210731695 RMSE: 0.9238164048946499 NRMSE: 0.3706890427960684 MAPE: 341.68887902095645 Predictor: ElasticNet Pearson Correlation: 0.7502952109171224 Spearman Correlation: 0.7415045990855498 Coefficient of Determination: 0.5629256368703114 RMSE: 0.30354356126518317 NRMSE: 0.08191769499285736 MAPE: 169.923275612312 Pearson Correlation: 0.22081631888644568 Spearman Correlation: 0.2828532373102743 Coefficient of Determination: -2.349568097421647 RMSE: 0.8519848868757193 NRMSE: 0.34186604667265313 MAPE: 294.4471735316988 Predictor: RandomForests Pearson Correlation: 0.5720995884106573 Spearman Correlation: 0.5663929332364112 Coefficient of Determination: 0.30118296599150474 RMSE: 0.38381778930159044 NRMSE: 0.10358140513931847 MAPE: 235.7950036897269 Pearson Correlation: 0.39661158095516746 Spearman Correlation: 0.40844845435653027 Coefficient of Determination: 0.1484584351866245 RMSE: 0.42957639677532594 NRMSE: 0.17237111452528164 MAPE: 269.5480647617531 Fold: 2 Protein: RB1 Protein Interaction Partners Count: 369 x_train_column_count: 366 x_train columns: ['AATF', 'ABCC1', 'ABL1', 'ACTL6A', 'ACTL6B', 'AFAP1', 'AHR', 'AKT1', 'ANXA5', 'ARID1A', 'ARID1B', 'ARID4A', 'ARMCX1', 'ARMCX2', 'ARMCX3', 'ARNT', 'AR', 'ASF1A', 'ATF2', 'ATM', 'AURKB', 'BCR', 'BDP1', 'BGLAP', 'BRCA1', 'BRF1', 'FAM208A', 'C4BPA', 'CABIN1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CBFB', 'CBX1', 'CBX4', 'CBX5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNT2', 'CDC25A', 'CDC27', 'CDC6', 'CDH1', 'CDK14', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPA', 'CEBPB', 'CEBPD', 'CEBPE', 'CHEK1', 'CHEK2', 'CLNK', 'COL1A1', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUX1', 'DCAF10', 'DGKZ', 'DNAJA3', 'DNMT1', 'DNMT3A', 'DUSP1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EGFR', 'EGF', 'EID1', 'EIF2AK1', 'EIF2AK4', 'AGO2', 'ELF1', 'ENC1', 'EP300', 'ERBB2', 'ESD', 'ESR1', 'ESR2', 'EZH2', 'FBXW7', 'FMO5', 'FOS', 'FOXM1', 'FRK', 'FZR1', 'G6PD', 'GAPDH', 'GATA1', 'GJA1', 'GNB2L1', 'GRB2', 'GSC', 'GTF2H1', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HARS2', 'HARS', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC8', 'HDC', 'HES1', 'HIF1A', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HIST4H4', 'HMGA1', 'HMGA2', 'HRAS', 'HSP90AA1', 'HSPA1A', 'HSPA8', 'ID2', 'IFI16', 'INS', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'KDM2A', 'KDM4A', 'KDM5A', 'KDM5B', 'PPP1R26', 'KIF11', 'KRAS', 'KRT10', 'KRT14', 'KRT5', 'L3MBTL2', 'L3MBTL1', 'LIMD1', 'LIN52', 'LIN54', 'LIN9', 'LMNA', 'LOR', 'LPAR6', 'MAF', 'MAP2K7', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEF2C', 'MORF4L1', 'MRFAP1', 'MRPL11', 'MRPS18B', 'MSH6', 'MTL5', 'MYBL2', 'MYC', 'MYOD1', 'NACC2', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NCR1', 'NDC80', 'NEO1', 'NFYA', 'NFYB', 'NFYC', 'NGF', 'NOTCH1', 'NPM1', 'NRAS', 'ORC1', 'PA2G4', 'PAX2', 'PAX3', 'PAX5', 'PAX6', 'PAX8', 'PCNA', 'PELP1', 'PGR', 'PHB', 'PHF21B', 'PIAS4', 'PIK3CA', 'PIK3R1', 'PIK3R3', 'PLK1', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPIA', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP1R3A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R3B', 'PPRC1', 'PRB1', 'PRB3', 'PRB4', 'PRDM2', 'PRH1', 'PRH2', 'PRIM1', 'PRIM2', 'PRKCB', 'PRMT2', 'PSMA7', 'PSMC1', 'PSMD10', 'PTEN', 'PTGDR', 'RAF1', 'RB1CC1', 'RBAK', 'RBBP4', 'RBBP5', 'RBBP6', 'RBBP7', 'RBBP8', 'RBBP9', 'RBL1', 'RBL2', 'RBFOX2', 'RFC1', 'RPS6KB1', 'RUNX2', 'S100A6', 'SETD1B', 'SETD7', 'SIRT1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMC1A', 'SMC2', 'SMC4', 'SMC5', 'SMYD2', 'SNW1', 'SP100', 'SP1', 'SP3', 'SPI1', 'STAM', 'STAT3', 'SUV39H1', 'SUV420H2', 'SUZ12', 'TAF1', 'TBP', 'TERT', 'TFAP2A', 'TFDP1', 'TFDP3', 'TGM2', 'THAP1', 'TMPO', 'TNS1', 'TOP2A', 'TP53BP1', 'TP53', 'TP73', 'TRDMT1', 'TRIM27', 'TTK', 'UBE2I', 'UBE3A', 'UBL4A', 'UBN1', 'UBR4', 'UBTF', 'UHRF1', 'USP4', 'USP7', 'VEGFA', 'VPS39', 'WDR59', 'WDR73', 'WEE1', 'WWTR1', 'YAP1', 'YY1', 'ZBTB16', 'ZBTB7A', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.8222120971652737 Spearman Correlation: 0.7728642513585217 Coefficient of Determination: 0.6760327327249173 RMSE: 0.13378100287003275 NRMSE: 0.048925176590854574 MAPE: 419.3633586119347 Pearson Correlation: 0.1909095928667813 Spearman Correlation: 0.12357330992098334 Coefficient of Determination: -8.53453619256858 RMSE: 0.7562157705958807 NRMSE: 0.4332571934525104 MAPE: 1799.968595260876 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 5.415778261841199, tolerance: 0.0029666208701464043 positive)
Pearson Correlation: 0.810024786273983 Spearman Correlation: 0.766399591211354 Coefficient of Determination: 0.6559223215406835 RMSE: 0.1378707476282151 NRMSE: 0.05042084099920096 MAPE: 385.36659089017445 Pearson Correlation: 0.1690853409799875 Spearman Correlation: 0.11572529509316165 Coefficient of Determination: -6.146283451591511 RMSE: 0.654690536721547 NRMSE: 0.3750905436637296 MAPE: 2095.8400685517404 Predictor: RandomForests Pearson Correlation: 0.5919612974425094 Spearman Correlation: 0.47126444887150715 Coefficient of Determination: 0.2043066486092442 RMSE: 0.20966056199598465 NRMSE: 0.07667516164276794 MAPE: 149.7410241705184 Pearson Correlation: 0.07542296428162835 Spearman Correlation: 0.12394888303580141 Coefficient of Determination: -0.025932392806574223 RMSE: 0.2480591867621438 NRMSE: 0.1421200552085709 MAPE: 194.5870804018028 Protein: CDH1 Protein Interaction Partners Count: 834 x_train_column_count: 826 x_train columns: ['ABCB1', 'ABCG2', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTR3', 'ACVR1B', 'ADAM10', 'ADAM15', 'ADAM17', 'ADAM9', 'AFP', 'AIMP1', 'AJAP1', 'AKAP9', 'AKT1', 'AKT2', 'AKTIP', 'ALB', 'ALCAM', 'ALDH1A1', 'ALDH3A1', 'ALK', 'AMOTL2', 'ANAPC4', 'ANAPC7', 'ANO1', 'ANXA2', 'ANXA5', 'AP1M1', 'AP1M2', 'APC2', 'APC', 'AQP1', 'AQP5', 'AREG', 'ARF6', 'ARHGAP31', 'ARID1A', 'ARL2BP', 'ARMC7', 'ARPC1A', 'ARPC2', 'ARRB2', 'ARVCF', 'AR', 'CLMP', 'ASF1A', 'ATF2', 'ATF3', 'ATM', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BAG3', 'BANP', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL6B', 'BCL9L', 'BCORL1', 'BMI1', 'BMP2', 'BMP4', 'BMP6', 'BMP7', 'BNIP3', 'BRCA1', 'BRCA2', 'BSG', 'BTBD7', 'BTC', 'BTF3', 'ANAPC15', 'CA2', 'CA9', 'CALCA', 'CALR', 'CAPN1', 'CAPNS1', 'CASP3', 'CASP8', 'CASP9', 'CASS4', 'CAV1', 'CBLL1', 'CBL', 'CBX7', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CCR7', 'CD1A', 'CD1B', 'CD1C', 'CD1E', 'CD207', 'CD24', 'CD274', 'CD276', 'CD2AP', 'CD34', 'CD44', 'CD46', 'CD68', 'CD82', 'CDC16', 'CDC23', 'CDC27', 'CDC42', 'CDC6', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH24', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK14', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN3', 'CDX2', 'CEACAM5', 'CFL1', 'CGN', 'CHGA', 'CHL1', 'CLCA2', 'CLDN1', 'CLDN2', 'CLDN3', 'CLDN4', 'CLDN5', 'CLDN7', 'CNTN1', 'COL1A1', 'CORO1C', 'CRB3', 'CREB1', 'CREBBP', 'CRYAB', 'YBX3', 'CSDC2', 'CSE1L', 'CSF2', 'CSNK2A1', 'CSNK2A2', 'CST5', 'CTBP1', 'CTBP2', 'CTCF', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTSL', 'CTTN', 'CXCL12', 'CXCL1', 'CXCR4', 'CYP1B1', 'DAAM1', 'DAB2IP', 'DACH1', 'DAPK1', 'DAP', 'DDR1', 'DDR2', 'DDX3X', 'DICER1', 'DKK1', 'DLC1', 'DLG1', 'DLG5', 'DNM2', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOT1L', 'DPAGT1', 'DPEP1', 'DSP', 'DUOX1', 'DUSP4', 'DVL1', 'DVL2', 'E2F1', 'ECT2', 'EDN1', 'EFEMP1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'EHD1', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'ELAVL1', 'ELF3', 'ENAH', 'ENG', 'EP300', 'EPB41L3', 'EPCAM', 'EPHA10', 'EPHA1', 'EPHA2', 'EPPK1', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ESRP1', 'ESRP2', 'ETS1', 'ETS2', 'EXOC3', 'EXOC4', 'EYA2', 'EZH2', 'EZR', 'F11R', 'F2RL2', 'SUPT20H', 'FBXL5', 'FER', 'FGF10', 'FGF13', 'FGF17', 'FGF19', 'FGF2', 'FGF4', 'FGF5', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FMN1', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC1', 'FOXC2', 'FOXJ2', 'FOXK2', 'FOXL1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXQ1', 'FRMPD2', 'FSCN1', 'FUT4', 'FXYD5', 'FYN', 'FZD1', 'FZD4', 'FZD7', 'FZR1', 'G6PD', 'GAB2', 'GABPA', 'GADD45A', 'GAPDH', 'GAS6', 'GATA1', 'GATA3', 'GATA4', 'GATA6', 'GDNF', 'GFRA1', 'GGT1', 'GJA1', 'GJB1', 'GJB2', 'GKN2', 'GLI1', 'GLI2', 'GMNN', 'GNA12', 'GNA13', 'GNB2L1', 'GNL3', 'GPA33', 'GRB2', 'GRHL2', 'GRHL3', 'GSK3B', 'GSN', 'GSTP1', 'H2AFZ', 'HAVCR2', 'HBEGF', 'HDAC1', 'HDAC2', 'HEPACAM', 'HES1', 'HGF', 'HGS', 'HIF1A', 'HMGA2', 'HNF4A', 'HOXB4', 'HOXD10', 'HPGDS', 'HPGD', 'HRAS', 'HSP90AA1', 'HSPA5', 'ICAM1', 'ID1', 'ID2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP3', 'IL10', 'IL15', 'IL17A', 'IL1B', 'IL24', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IQSEC1', 'IRS1', 'IRS2', 'ITGA5', 'ITGA6', 'ITGAE', 'ITGAM', 'ITGB1', 'ITGB4', 'ITGB7', 'ITPKB', 'IVL', 'JAG1', 'JAK2', 'AJUBA', 'JUN', 'JUP', 'KDM1A', 'KDM6A', 'KDR', 'KEAP1', 'KIFC3', 'KIT', 'KLF4', 'KLF5', 'KLF8', 'KLK3', 'KLK7', 'KLRG1', 'KRAS', 'KRT10', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'KRT9', 'LAMA1', 'LAMB1', 'LAMC2', 'LASP1', 'LATS1', 'LATS2', 'LCN2', 'LEF1', 'LEP', 'LGALS3', 'LGALS4', 'LGALS9', 'LGR5', 'LIF', 'LIMA1', 'LIN28A', 'LIPG', 'LLGL2', 'LMNA', 'LOR', 'LOXL2', 'LOXL3', 'LOX', 'LRP5', 'LRP6', 'LY6K', 'MACC1', 'MACROD1', 'MAD2L2', 'MAGI1', 'MAP2K1', 'MAP2K7', 'MAP4K5', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARK2', 'MARVELD2', 'MCAM', 'MCL1', 'MDM2', 'MED1', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGAT5', 'MGMT', 'MKI67', 'MLH1', 'MLLT4', 'MME', 'MMP11', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP1', 'MMP25', 'MMP27', 'MMP2', 'MMP3', 'MMP7', 'MMP8', 'MMP9', 'MPP5', 'MRAP', 'MSH2', 'MSN', 'MT1G', 'MTA1', 'MTA3', 'MTBP', 'MTDH', 'MTOR', 'MUC1', 'MUC4', 'MYCN', 'MYC', 'MYH6', 'MYO6', 'MYO7A', 'NANOG', 'NCAM1', 'NCOA1', 'NCSTN', 'NDRG1', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEUROG3', 'NF2', 'NFE2L2', 'NFIC', 'NKD2', 'NKX2-1', 'NKX6-1', 'NKX6-2', 'NME1', 'NOG', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NR2F1', 'NRP2', 'NUDT21', 'NUMBL', 'NUMB', 'NUP98', 'NUTF2', 'OTUB1', 'OVOL1', 'OVOL2', 'PARD3', 'PARD6A', 'PAX2', 'PAX5', 'PAX6', 'PAX8', 'PCSK9', 'PDCD4', 'PDGFRB', 'PDPN', 'PEBP1', 'PECAM1', 'PGR', 'PHLPP1', 'PI3', 'PIK3CA', 'PIK3R1', 'PIP5K1A', 'PIP5K1C', 'PIP', 'PIR', 'PITX1', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAUR', 'PLAU', 'PLCD1', 'PLEKHA7', 'PLG', 'PODXL', 'POLR2C', 'POSTN', 'POTEF', 'POU5F1', 'PPARA', 'PPARGC1A', 'PPARG', 'PPL', 'PPP6C', 'PRAME', 'PRDM10', 'PRKAR1A', 'PRKCA', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRKG1', 'PRMT5', 'PROC', 'PROM1', 'PRSS8', 'PSEN1', 'PTCH1', 'PTEN', 'PTF1A', 'PTGS2', 'PTK2', 'PTPN11', 'PTPN14', 'PTPRC', 'PTPRF', 'PTPRJ', 'PTPRM', 'PTPRS', 'PTPRT', 'PTPRU', 'PTRH2', 'PVRL1', 'PVRL2', 'PVR', 'PXN', 'RAB11A', 'RAB25', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RACGAP1', 'RAF1', 'RALA', 'RALBP1', 'RALGDS', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RARB', 'RASSF1', 'RB1', 'RBM4', 'RCOR1', 'RDX', 'REM1', 'RET', 'RHOA', 'RHOB', 'RHOC', 'RHOD', 'RICTOR', 'RND3', 'ROCK1', 'ROCK2', 'RPS6KB1', 'RPTOR', 'RRM2', 'RUNX2', 'RUNX3', 'S100A14', 'S100A4', 'S100A8', 'SATB1', 'SCRIB', 'SDC1', 'SDC4', 'SDHC', 'SELE', 'SELL', 'SELP', 'SEMA3C', 'SEMA3F', 'SENP1', 'SERPINB4', 'SERPINB5', 'SERPINE1', 'SFN', 'SFRP1', 'SFRP2', 'SFTPC', 'SHH', 'SIK1', 'SIN3A', 'SIRT1', 'SIRT2', 'SIRT4', 'SIRT7', 'SIX1', 'SIX2', 'SKIL', 'SKP2', 'SLC2A1', 'SLC39A6', 'SLC6A3', 'SLC9A3R1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SNAI1', 'SNAI2', 'SNAI3', 'SNX16', 'SNX1', 'SOX10', 'SOX17', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPARC', 'SPDEF', 'SPINT1', 'SPP1', 'SPRY1', 'SRCIN1', 'SRC', 'SRXN1', 'ST14', 'ST7L', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STX4', 'STYK1', 'SUCLG2', 'SUMO1', 'SUZ12', 'SYNJ2', 'SYP', 'TACC3', 'TACSTD2', 'TATDN1', 'TBX1', 'TBX3', 'TCF15', 'TCF4', 'TDGF1', 'TERT', 'TET2', 'TFF1', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBI', 'TGFBR1', 'TGFBR2', 'THBS1', 'THEM4', 'THUMPD1', 'THY1', 'TIAM1', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLN1', 'TLR4', 'TMPRSS2', 'TMPRSS4', 'TNFRSF6B', 'TNF', 'TNK2', 'TNS1', 'TP53BP1', 'TP53BP2', 'TP53', 'TRIM21', 'TRIM29', 'TRIM44', 'TRIP10', 'TRPS1', 'TSPYL2', 'TWIST1', 'TWIST2', 'TYRP1', 'T', 'UBE2I', 'UBE2S', 'USP48', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VEZT', 'VHL', 'VIM', 'VIPAS39', 'VPS33B', 'VTN', 'WASL', 'WDFY2', 'WDTC1', 'WIF1', 'WISP1', 'WISP3', 'WNT10A', 'WNT10B', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT9A', 'WNT9B', 'WT1', 'XIAP', 'YAP1', 'YBX1', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 7.295652083214923e-14 NRMSE: 1.1703941739335723e-14 MAPE: 3.9686764851872083e-11 Pearson Correlation: 0.2575294253168524 Spearman Correlation: 0.2845771144278607 Coefficient of Determination: -5.441918716581187 RMSE: 2.9203809715530387 NRMSE: 0.5186256387059205 MAPE: 900.8329561047273 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.960748368647445, tolerance: 0.0674331510902594 positive)
Pearson Correlation: 0.9999851170948404 Spearman Correlation: 0.999939323341342 Coefficient of Determination: 0.9999688657944291 RMSE: 0.006252712764472538 NRMSE: 0.0010030821792688758 MAPE: 5.370637106117152 Pearson Correlation: 0.3173188158187183 Spearman Correlation: 0.3828797190517999 Coefficient of Determination: -5.645670778649988 RMSE: 2.9662059459730994 NRMSE: 0.5267636203113301 MAPE: 1200.2308340806703 Predictor: RandomForests Pearson Correlation: 0.7806867396346588 Spearman Correlation: 0.6867325687217668 Coefficient of Determination: 0.6038524604986277 RMSE: 0.705306791485822 NRMSE: 0.11314779682133985 MAPE: 183.36488246446947 Pearson Correlation: 0.6614671656077069 Spearman Correlation: 0.6570131133887294 Coefficient of Determination: 0.3963484324584017 RMSE: 0.8939743457162135 NRMSE: 0.15875942918064526 MAPE: 217.42057197521228 Protein: CDH2 Protein Interaction Partners Count: 472 x_train_column_count: 467 x_train columns: ['ABCG2', 'ABL1', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTR3', 'ADAM10', 'ADH1A', 'AFP', 'AHSG', 'AKT1', 'AKT3', 'ALB', 'ALCAM', 'ALDH1A1', 'AMBN', 'AMELX', 'AMOTL1', 'AMTN', 'ANGPT1', 'ANO8', 'ANXA5', 'APC2', 'APC', 'APLP2', 'APOA1', 'APOA2', 'APOA5', 'APOB', 'APOE', 'APOL1', 'APPL1', 'APP', 'ARHGAP32', 'ARMC7', 'ARPC5', 'ARVCF', 'AR', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BCL2L1', 'BDNF', 'BMI1', 'BMP15', 'BMP2', 'BMP4', 'BMP7', 'BNIP2', 'BOC', 'BPIFB2', 'RGCC', 'GSKIP', 'C3', 'C4A', 'CABLES1', 'CADM1', 'CALU', 'CASP3', 'CAV1', 'CBLL1', 'CCNA2', 'CCNB1', 'CCND1', 'CD24', 'CD34', 'CD44', 'CD80', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK4', 'CDK5', 'CDK6', 'CDKN2A', 'CDON', 'CDX2', 'CEBPZ', 'CFL1', 'CHGB', 'CHL1', 'CHRDL1', 'CKAP4', 'CLDN11', 'CLDN3', 'CLDN4', 'CLDN7', 'CORT', 'CP', 'CREBBP', 'CRP', 'CSF1', 'CSK', 'CST3', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTTN', 'CXCL12', 'CXCR4', 'CYLD', 'CYR61', 'DBN1', 'DDR1', 'DDR2', 'DKK1', 'DLG4', 'DLG5', 'DMP1', 'DNAJC3', 'DSP', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EFNB2', 'EFNB3', 'EGFR', 'EGF', 'EHMT2', 'EIF2AK3', 'ENAM', 'ENG', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA4', 'EPHB2', 'EPS8', 'ERBB2', 'ERBB4', 'ESR1', 'ESRP1', 'EXOC4', 'EZH2', 'EZR', 'F11R', 'F5', 'EVA1A', 'FAM20A', 'FAM20C', 'FBN1', 'FER', 'FGA', 'FGF13', 'FGF23', 'FGF2', 'FGFR1', 'FGFR4', 'FGG', 'FN1', 'FOXC2', 'FOXD3', 'FOXO1', 'FOXP4', 'FSTL1', 'FSTL3', 'FUCA2', 'GAA', 'GAPDH', 'GAS6', 'GATA4', 'GFAP', 'GJA10', 'GJA1', 'GJA3', 'GJB6', 'GJC1', 'GJC3', 'GJD3', 'GJD4', 'GLI1', 'GOLM1', 'GPC3', 'GRIA1', 'GRIA2', 'HGF', 'HMGA2', 'HNF4A', 'HRAS', 'HRC', 'HSP90B1', 'HSPA5', 'IARS2', 'IGF1R', 'IGF1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL1B', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'INVS', 'IQGAP1', 'ISL1', 'ITGA6', 'ITGB1', 'ITIH2', 'ITPKB', 'JAG1', 'JAM3', 'JUN', 'JUP', 'KCNA5', 'KDR', 'KIAA2022', 'KIF5B', 'KIT', 'KLF4', 'KNG1', 'KRAS', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT8', 'KTN1', 'L1CAM', 'LAMB1', 'LAMB2', 'LAMC1', 'LEF1', 'LGALS1', 'LRP5', 'LRP6', 'LRRC7', 'LTBP1', 'LTBP3', 'MAP1B', 'MAP2K6', 'MAP2K7', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MATN3', 'MBTPS1', 'MCAM', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEPE', 'MET', 'MFGE8', 'MFI2', 'MGAT4A', 'MIA3', 'MKI67', 'MLLT4', 'MMP14', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MPDZ', 'MPP5', 'MRAP', 'MRPL49', 'MSLN', 'MSN', 'MTHFD1', 'MUC1', 'MUC4', 'MXRA8', 'MYC', 'MYO10', 'MZF1', 'NANOG', 'NCAM1', 'NCSTN', 'NDRG1', 'NENF', 'NES', 'NFASC', 'NGF', 'NKX2-5', 'NLGN1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTUM', 'NRCAM', 'NT5C', 'NT5E', 'NTRK2', 'NUCB1', 'NUMBL', 'NUMB', 'OLFM3', 'P4HB', 'PARD3', 'PAX6', 'PCSK9', 'PC', 'PDGFRB', 'PDIA4', 'PDIA6', 'PECAM1', 'PENK', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PITX2', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PNPLA2', 'POU5F1', 'PPT2', 'PRKCDBP', 'PRKCSH', 'PROC', 'PROM1', 'PRPH', 'PRSS23', 'PSEN1', 'PTEN', 'PTK2', 'PTPN11', 'PTPN1', 'PTPN2', 'PTPRC', 'PTPRS', 'PVRL1', 'PVRL2', 'PVRL3', 'PXN', 'QSOX1', 'RAB11FIP1', 'RAB3D', 'RAB5A', 'RAC1', 'RCN1', 'RELN', 'REM1', 'RHOA', 'RHOB', 'RHOC', 'ROBO1', 'PTBP3', 'RPS6KB1', 'RUNX2', 'S100A14', 'S100A4', 'SARS2', 'SCARB2', 'SCG2', 'SCG3', 'SDC2', 'SEMA3A', 'SENP3', 'SERPINA10', 'SERPINA1', 'SERPINC1', 'SERPIND1', 'SERPINE1', 'SHH', 'SHISA5', 'SIRT7', 'SKP1', 'SLC2A1', 'SLC9A3R1', 'SLIT1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SNAI1', 'SNAI2', 'SNAI3', 'SOX10', 'SOX18', 'SOX1', 'SOX2', 'SOX4', 'SOX9', 'SP7', 'SPAG9', 'SPARCL1', 'SPARC', 'SPP1', 'SPP2', 'SRC', 'ST6GALNAC5', 'STAT3', 'STC2', 'SYP', 'TBX1', 'TCF3', 'TEK', 'TF', 'TGFB1', 'TGFBR1', 'TGM2', 'TGOLN2', 'THY1', 'TIMP1', 'TJP1', 'TJP3', 'TMEM132A', 'TNC', 'TNF', 'TNNT1', 'TP53', 'TRPS1', 'TSC2', 'TWIST1', 'TWIST2', 'USP9X', 'VANGL2', 'VCAM1', 'VCAN', 'VCL', 'VEGFA', 'VGF', 'VIM', 'VTN', 'VWA1', 'WFS1', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7A', 'XIRP1', 'ZBTB16', 'ZEB1', 'ZEB2', 'ZSCAN1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.9445075352242432 Spearman Correlation: 0.9175540951224843 Coefficient of Determination: 0.8920944840953747 RMSE: 0.12091651402897442 NRMSE: 0.04381350606166187 MAPE: 472.8383911505983 Pearson Correlation: -0.0880078383169503 Spearman Correlation: -0.08461613501121844 Coefficient of Determination: -32.74175805846555 RMSE: 2.248459189214087 NRMSE: 1.1845404727785642 MAPE: 2373.512113558963 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 6.128960099032333, tolerance: 0.007276153902921154 positive)
Pearson Correlation: 0.9266796657583899 Spearman Correlation: 0.8972524825220419 Coefficient of Determination: 0.8585516252731777 RMSE: 0.13844037794796923 NRMSE: 0.05016319224145563 MAPE: 785.0736084887442 Pearson Correlation: -0.025497452705843745 Spearman Correlation: -0.05741391083796704 Coefficient of Determination: -8.99757290023037 RMSE: 1.223907075752864 NRMSE: 0.644782646313483 MAPE: 2132.454894612614 Predictor: RandomForests Pearson Correlation: 0.5482233699794163 Spearman Correlation: 0.47495578566105146 Coefficient of Determination: 0.1763585814493952 RMSE: 0.33406646720396765 NRMSE: 0.1210473466207579 MAPE: 450.2023217682974 Pearson Correlation: 0.23214368046879805 Spearman Correlation: 0.33307969954150823 Coefficient of Determination: 0.04108356361491117 RMSE: 0.3790456676193911 NRMSE: 0.199690052850583 MAPE: 110.18428875041191 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.5750222934418499 Spearman Correlation: 0.5464477708979472 Coefficient of Determination: 0.33065063795512506 RMSE: 0.16993269557651747 NRMSE: 0.12789106558632488 MAPE: 280.5599204073236 Pearson Correlation: 0.15129344217298812 Spearman Correlation: 0.33341137450004876 Coefficient of Determination: -0.4540238663663705 RMSE: 0.23866673811950395 NRMSE: 0.1963850391833325 MAPE: 1617.3596664557049 Predictor: ElasticNet Pearson Correlation: 0.5723721973092712 Spearman Correlation: 0.5461052538587899 Coefficient of Determination: 0.3276002463374865 RMSE: 0.17031946821429153 NRMSE: 0.12818215003371 MAPE: 296.60509095564515 Pearson Correlation: 0.2923722962984612 Spearman Correlation: 0.36440347283191893 Coefficient of Determination: -0.09046592516092966 RMSE: 0.20668653268342135 NRMSE: 0.1700703798925544 MAPE: 1638.1601138374529 Predictor: RandomForests Pearson Correlation: 0.5643358015865344 Spearman Correlation: 0.5594957544546396 Coefficient of Determination: 0.29155153385693355 RMSE: 0.1748254487915101 NRMSE: 0.13157334356228134 MAPE: 361.8760380238018 Pearson Correlation: 0.2660954627991169 Spearman Correlation: 0.37114427860696525 Coefficient of Determination: -0.07709174127645158 RMSE: 0.20541515331686686 NRMSE: 0.16902423542900263 MAPE: 1459.1740837012032 Protein: PTEN Protein Interaction Partners Count: 884 x_train_column_count: 876 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ABTB1', 'ACTB', 'ACTG1', 'ADM', 'AEBP1', 'AFP', 'AKT1S1', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'AMHR2', 'ANXA2', 'ANXA5', 'APAF1', 'APC', 'ARAF', 'AREG', 'ARHGAP21', 'ARID1A', 'ARID2', 'ARL2BP', 'AR', 'ATF3', 'ATG12', 'ATG5', 'ATG7', 'ATM', 'ATRX', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'AXL', 'BAD', 'BAG5', 'BARD1', 'BAX', 'BBC3', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BIRC3', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BNIP3', 'BRAF', 'BRCA1', 'BRCA2', 'BRD4', 'BTG2', 'BTK', 'SPRTN', 'CLHC1', 'CA9', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBL', 'CBX7', 'CCL2', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD24', 'CD274', 'CD34', 'CD44', 'CD79A', 'CD79B', 'CDC14A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC7', 'CDH17', 'CDH1', 'CDH2', 'CDIPT', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CENPC', 'CFL1', 'CFLAR', 'CFTR', 'CHD1', 'CHD8', 'CHEK1', 'CHEK2', 'CHKA', 'CHORDC1', 'CHUK', 'CLTCL1', 'CLTC', 'CNOT6L', 'CREB1', 'CREBBP', 'CRP', 'CSF1R', 'CSF1', 'CSK', 'CSN2', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTGF', 'CTLA4', 'CTNNB1', 'CUL1', 'CUL3', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'DAPK1', 'DAXX', 'DBN1', 'DCAF13', 'DDIT4', 'DDR2', 'DECR1', 'DEPTOR', 'DGCR8', 'DICER1', 'DLC1', 'DLG1', 'DLG4', 'DNM1L', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOLPP1', 'DUSP1', 'DUSP6', 'DUT', 'DVL1', 'DYRK1A', 'E2F1', 'E2F2', 'E2F3', 'ECSCR', 'EGFR', 'EGF', 'EGR1', 'EIF2AK2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4EBP2', 'EIF4E', 'EIF4G1', 'EML4', 'ENDOG', 'EP300', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA3', 'EPHA4', 'EPHA5', 'EPHA7', 'EPHB1', 'EPHB2', 'EPHB3', 'EPHB4', 'ERBB2', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ESR1', 'ETS1', 'ETS2', 'ETV1', 'ETV6', 'EYA2', 'EZH2', 'EZR', 'FABP4', 'FASLG', 'FASN', 'FBXW7', 'FCGR1B', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FIG4', 'FKBP1A', 'FLCN', 'FLT1', 'FLT3', 'FLT4', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXG1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FOXP3', 'FRK', 'FYN', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GCK', 'GDF10', 'GDF2', 'GFAP', 'GJA1', 'GLI1', 'GNA11', 'GNAQ', 'GNAS', 'GNRHR', 'GRASP', 'GRB2', 'GRPR', 'GSK3A', 'GSK3B', 'GSTP1', 'H1F0', 'H2AFX', 'HAVCR2', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HES1', 'HGF', 'HIF1A', 'HIST1H2BA', 'HK1', 'HK2', 'HMGA2', 'HNF4A', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA1A', 'HSPA1B', 'HSPA2', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'ID1', 'ID4', 'IDH1', 'IDH2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL17A', 'IL21', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INPP4A', 'INPP4B', 'INPP5A', 'INPP5B', 'INPP5D', 'INPP5E', 'INPP5F', 'INPP5J', 'INPP5K', 'INPPL1', 'INSRR', 'INSR', 'INS', 'IPMK', 'IPO11', 'IQGAP1', 'IRAK1', 'IRS1', 'IRS2', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'ITPR3', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUN', 'KAT2B', 'KDM5B', 'KDM5C', 'KDM6A', 'KDR', 'KEAP1', 'ATG13', 'KIF11', 'KLLN', 'KITLG', 'KIT', 'KLF17', 'KLF2', 'KLF4', 'KLK3', 'KPNA1', 'KPNA2', 'KPNA5', 'KPNA6', 'KPNA7', 'KRAS', 'KRT14', 'KRT5', 'KRT8', 'LASP1', 'LATS1', 'LATS2', 'LCK', 'LDHA', 'LEF1', 'LEP', 'LGALS3', 'LIG4', 'LOX', 'LRIG1', 'LRP1B', 'LRRK2', 'LYN', 'LYPD1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAN2C1', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K3', 'MAP2K4', 'MAP2K7', 'MAP3K1', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK4', 'MAPK6', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAP1', 'MAPT', 'MARCH2', 'MARCH3', 'MAST1', 'MAST2', 'MAST3', 'MAST4', 'MATK', 'MCL1', 'MCM2', 'MCM7', 'MCRS1', 'MDK', 'MDM2', 'MDM4', 'MECOM', 'MECP2', 'MED12', 'MEN1', 'MET', 'MGMT', 'MINPP1', 'MITF', 'MKI67', 'MKRN1', 'MLH1', 'MLH3', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT1', 'MLST8', 'MME', 'MMP2', 'MMP9', 'MOV10', 'MRAP', 'MRE11A', 'MSH2', 'MSH6', 'MTDH', 'MTMR2', 'MTOR', 'MTSS1', 'MUTYH', 'MVP', 'MYCN', 'MYC', 'MYLK', 'MYOCD', 'NANOG', 'NCKAP1', 'NCOA3', 'NCOR2', 'NDFIP1', 'NDFIP2', 'NDRG1', 'NDRG2', 'NEDD4L', 'NEDD4', 'NES', 'NF1', 'NF2', 'NFATC1', 'NFATC4', 'NFE2L2', 'NFKBIA', 'NGFR', 'NKX3-1', 'NLGN3', 'NLGN4X', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR1H4', 'NR3C2', 'NRAS', 'NRP2', 'NTRK1', 'NTRK2', 'NUMB', 'OCRL', 'OLIG2', 'OTUD3', 'PALB2', 'PARD3', 'PARD6A', 'PARD6B', 'PARD6G', 'PARK2', 'PARK7', 'PARP1', 'PAX8', 'PBK', 'PBRM1', 'PCGF2', 'PCSK9', 'PDCD1', 'PDCD4', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PDK1', 'PDK2', 'PDPK1', 'PDZK1', 'PECAM1', 'PGM3', 'PGR', 'PHF6', 'PHLPP1', 'PHLPP2', 'PI3', 'PI4K2A', 'PI4K2B', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIK3R5', 'PIKFYVE', 'PINK1', 'PIP4K2A', 'PIP4K2B', 'PIP4K2C', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PIP5KL1', 'PKM', 'PLCB1', 'PLCB2', 'PLCB3', 'PLCB4', 'PLCD1', 'PLCD3', 'PLCD4', 'PLCE1', 'PLCG1', 'PLCG2', 'PLCH1', 'PLCH2', 'PLCZ1', 'PLEKHA1', 'PLEK', 'PLK1', 'PLK2', 'PLK3', 'BPIFA1', 'PMAIP1', 'PML', 'PMPCA', 'PMS1', 'PMS2', 'POLE', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPM1D', 'PPP2R1A', 'PPP2R4', 'PPP2R5A', 'PPP2R5E', 'PPP3CA', 'PPP6C', 'PRDX1', 'PREX2', 'PRKAA1', 'PRKAA2', 'PRKCI', 'PRKCZ', 'PRKDC', 'PRMT5', 'PROM1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTER', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPMT1', 'PTPN11', 'PTPN12', 'PTPN13', 'PTPN1', 'PTPRC', 'PTPRD', 'PTS', 'PXN', 'RAB7A', 'RAC1', 'RAC2', 'RAD51C', 'RAD51D', 'RAD51', 'RAD52', 'RAF1', 'RASA1', 'RASSF1', 'RB1CC1', 'RB1', 'RBL1', 'RBL2', 'RBM38', 'RBFOX2', 'RCN1', 'RECK', 'RELA', 'REL', 'REM1', 'RETN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'DROSHA', 'RNF146', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KB1', 'RPS6KB2', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'RRM1', 'RSL1D1', 'RUNX3', 'RWDD3', 'SACM1L', 'SALL4', 'SCAI', 'SCGB1D4', 'SCRIB', 'SDHB', 'SDHC', 'SERPINA1', 'SERPINA4', 'SERPINB5', 'SESN1', 'SESN2', 'SETD2', 'SGK1', 'SGK2', 'SGK3', 'SHANK2', 'SHARPIN', 'SHC1', 'SHFM1', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT5', 'SIRT6', 'SIRT7', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC2A4', 'SLC34A2', 'SLC9A3R1', 'SLC9A3R2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNCA', 'SNX27', 'SOCS1', 'SOCS3', 'SOD2', 'SOS1', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPOP', 'SPRY1', 'SPRY2', 'SRBD1', 'SRC', 'SREBF1', 'SRF', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STMN1', 'STUB1', 'STX16', 'SUCLG2', 'SUMO1', 'SYK', 'SYNJ1', 'SYNJ2', 'TACSTD2', 'TBX1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TEP1', 'TERT', 'TET1', 'TGFB1', 'TGFBR1', 'TGFBR2', 'TGM2', 'THBS1', 'TIMP1', 'TIMP3', 'TJP1', 'TLR4', 'TMEM55A', 'TMEM55B', 'TMPRSS2', 'TNFRSF10B', 'TNFSF10', 'TNF', 'TNKS2', 'TNKS', 'TNPO2', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TPM1', 'TRAF6', 'TRIM27', 'TRIM29', 'TSC1', 'TSC2', 'TTN', 'TUT1', 'TWIST1', 'TWSG1', 'TXN', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2E1', 'UBE2I', 'UBE2L3', 'UBE3A', 'ULK1', 'ULK2', 'USP10', 'USP13', 'USP18', 'USP28', 'USP7', 'USP8', 'UTF1', 'UVRAG', 'VCL', 'VDR', 'VEGFA', 'VHL', 'WDR18', 'WDTC1', 'WEE1', 'WIPI1', 'WIPI2', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT9A', 'WNT9B', 'WT1', 'WWP1', 'WWP2', 'XIAP', 'XPO1', 'XPO5', 'YAP1', 'YES1', 'YWHAB', 'YWHAZ', 'YY1', 'ZEB1', 'ZEB2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 1.5309322385393214e-14 NRMSE: 2.393764738549482e-15 MAPE: 2.1306261396965448e-11 Pearson Correlation: 0.12585423889573624 Spearman Correlation: 0.0328699639059604 Coefficient of Determination: -2375.8616172335956 RMSE: 24.943540128893922 NRMSE: 8.365823762038477 MAPE: 6744.825162004024 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.4650385828574227, tolerance: 0.020892714789331884 positive)
Pearson Correlation: 0.9999804658742153 Spearman Correlation: 0.9999371535502276 Coefficient of Determination: 0.9999566003375915 RMSE: 0.0041091639619936 NRMSE: 0.0006425086329440387 MAPE: 3.496684402796361 Pearson Correlation: 0.1268066258474309 Spearman Correlation: 0.01826651058433324 Coefficient of Determination: -42403.109775598205 RMSE: 105.35620468867855 NRMSE: 35.33545904503573 MAPE: 4541.886593388574 Predictor: RandomForests Pearson Correlation: 0.5923384886626772 Spearman Correlation: 0.5372839462573086 Coefficient of Determination: 0.30702419690994753 RMSE: 0.5192414215132102 NRMSE: 0.08118855781615357 MAPE: 252.1519350856801 Pearson Correlation: 0.31672049556530973 Spearman Correlation: 0.34155614845859655 Coefficient of Determination: 0.0874892282862324 RMSE: 0.4887369139265927 NRMSE: 0.16391766632901553 MAPE: 493.99105733534475 Protein: BRCA2 Protein Interaction Partners Count: 361 x_train_column_count: 351 x_train columns: ['ABL1', 'ACHE', 'ADRB1', 'ADRB2', 'AKT1', 'ALK', 'APEX1', 'ARID1A', 'ARPC1A', 'AR', 'ATAD5', 'ATM', 'ATRIP', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'B3GALTL', 'BACH1', 'BARD1', 'BCCIP', 'BCHE', 'BDNF', 'BECN1', 'BIRC5', 'BLM', 'BMI1', 'BRCA1', 'BRCC3', 'BRE', 'BRIP1', 'SLX4', 'BUB1B', 'BUB1', 'BUB3', 'SFR1', 'RHNO1', 'RMI2', 'BABAM1', 'MMS22L', 'CASC1', 'CASC5', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCNE1', 'CDC25A', 'CDC25C', 'CDC45', 'CDC6', 'CDH1', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CENPE', 'CENPF', 'CEP55', 'CHEK1', 'CHEK2', 'CHRNA1', 'CLSPN', 'CNTROB', 'CREM', 'CSMD3', 'CTNNB1', 'CYP19A1', 'DMC1', 'DNA2', 'DSN1', 'DYNC1LI2', 'EGFR', 'EGF', 'ELAC2', 'EME1', 'EME2', 'ENAM', 'EPCAM', 'ERBB2', 'ERBB3', 'ERCC1', 'ERCC2', 'ERCC4', 'ERCC5', 'ERCC6', 'ERCC8', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM175A', 'FANCA', 'FANCB', 'FANCC', 'FANCD2', 'FANCE', 'FANCF', 'FANCG', 'FANCI', 'FANCL', 'FANCM', 'FBN1', 'FBXO18', 'FBXW7', 'FEN1', 'FGFR2', 'FHIT', 'FLNA', 'FOXM1', 'GAPDH', 'GEN1', 'SLX1B', 'H2AFX', 'HELQ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HMG20A', 'HMG20B', 'HMMR', 'HNRNPC', 'HOXB13', 'HRAS', 'HUS1', 'ITPKB', 'KAT2B', 'KAT5', 'KEAP1', 'SPIDR', 'KIF23', 'KIF4A', 'KIT', 'KLK3', 'KRAS', 'KRT5', 'LIG1', 'LIG3', 'LIG4', 'LIMD1', 'LSP1', 'MAD2L2', 'MAGED1', 'MAMSTR', 'MAP2K2', 'MAP3K1', 'MCM10', 'MCPH1', 'MDC1', 'MDM2', 'MDM4', 'MEN1', 'MGMT', 'MKI67', 'MLH1', 'MLH3', 'KMT2C', 'MND1', 'MORF4L1', 'MRE11A', 'MRPL36', 'MSH2', 'MSH3', 'MSH4', 'MSH5', 'MSH6', 'MTA2', 'FAN1', 'MUC1', 'MUS81', 'MUTYH', 'MYC', 'NBN', 'NCAPG', 'NEDD4', 'NF1', 'NHEJ1', 'NNT', 'NOTCH1', 'NSL1', 'NSMCE4A', 'OBFC1', 'OGG1', 'PALB2', 'PARG', 'PARP1', 'PARP2', 'PARP3', 'PAXIP1', 'PCNA', 'PDLIM7', 'PDS5A', 'PDS5B', 'PGR', 'PIK3CA', 'PLCB4', 'PLEC', 'PLEKHH1', 'PLK1', 'PMS1', 'PMS2', 'PNOC', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'POLN', 'POLQ', 'PRDM9', 'PRKDC', 'PRSS1', 'PSMC3IP', 'PSMD3', 'PSMD6', 'PTEN', 'RAD17', 'RAD18', 'RAD1', 'RAD21', 'RAD23B', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD52', 'RAD54B', 'RAD54L', 'RAD9A', 'RAD9B', 'RAG2', 'RASSF1', 'RBBP8', 'RBMX', 'RECQL4', 'RECQL5', 'RECQL', 'RET', 'REV1', 'REV3L', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RNF168', 'RNF8', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SKP2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCAL1', 'SMARCB1', 'SMC1A', 'SMC2', 'SMC3', 'SMC4', 'SMC5', 'SMC6', 'SMUG1', 'SNAI2', 'SP1', 'SPO11', 'STAT5A', 'STK11', 'STRA13', 'SUV39H1', 'SYCP3', 'TBCE', 'TDP1', 'TERT', 'TEX15', 'TMPRSS2', 'TNS1', 'TOP1', 'TOP2A', 'TOP3A', 'TOP3B', 'TOPBP1', 'TOX3', 'TP53BP1', 'TP53', 'TPX2', 'TRIP12', 'PRSS58', 'TTK', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2D1', 'UBE2E2', 'UBE2E3', 'UBE2N', 'UBE2T', 'UIMC1', 'USF1', 'USP11', 'USP15', 'USP1', 'USP21', 'USP4', 'UVRAG', 'VEGFA', 'VWF', 'WDR48', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WTIP', 'XPA', 'XPO1', 'XRCC1', 'XRCC2', 'XRCC3', 'XRCC4', 'XRCC5', 'XRCC6', 'ZFYVE26', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.8345098307368035 Spearman Correlation: 0.8116168222988233 Coefficient of Determination: 0.6964066575963686 RMSE: 0.10762238460599495 NRMSE: 0.06933315162248024 MAPE: 286.8554445364379 Pearson Correlation: -0.03689063032775666 Spearman Correlation: -0.04530777485123403 Coefficient of Determination: -2.7444865884982614 RMSE: 0.3738313634864516 NRMSE: 0.25304526645126785 MAPE: 899.6639137226256 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 3.4347559077106755, tolerance: 0.0020487419647026942 positive)
Pearson Correlation: 0.8256649529182448 Spearman Correlation: 0.8011581183477032 Coefficient of Determination: 0.6816089237591968 RMSE: 0.11021404256456782 NRMSE: 0.07100276538223084 MAPE: 283.3962962221013 Pearson Correlation: 0.003947390944183177 Spearman Correlation: 0.009589308360159985 Coefficient of Determination: -1.8959547264574503 RMSE: 0.3287573560542734 NRMSE: 0.22253481351781484 MAPE: 684.2337460720466 Predictor: RandomForests Pearson Correlation: 0.5785687737545514 Spearman Correlation: 0.5134262809924671 Coefficient of Determination: 0.196163172604347 RMSE: 0.17512189109946347 NRMSE: 0.11281809702010853 MAPE: 181.78134862320357 Pearson Correlation: 0.31303320234229776 Spearman Correlation: 0.31835430689688815 Coefficient of Determination: 0.06397658885597002 RMSE: 0.18690587408250395 NRMSE: 0.12651599445114087 MAPE: 128.41740179579563 Protein: CDKN2A Protein Interaction Partners Count: 612 x_train_column_count: 605 x_train columns: ['ABCC1', 'ABL1', 'ACAP1', 'ACAP2', 'ACP5', 'ACTA1', 'ACTB', 'ACTG1', 'ADAMTS9', 'ADAP1', 'AFP', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD12', 'ANXA5', 'AP3D1', 'AP3S1', 'AP3S2', 'APAF1', 'APBA1', 'APBA2', 'ARAP1', 'ARAP2', 'ARF1', 'ARF3', 'ARF4', 'ARF5', 'ARF6', 'ARFGAP1', 'ARFGAP3', 'ARFIP2', 'ARFRP1', 'ARID1A', 'ARID2', 'ARID5B', 'ARL10', 'ARL1', 'ARL2', 'ARL3', 'ARL4A', 'ARL5A', 'AR', 'ASAP1', 'ATM', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'AXIN1', 'BAP1', 'BCL2L11', 'BCL2L1', 'BCL6', 'BECN1', 'BIRC5', 'BMI1', 'BRAF', 'BRCA1', 'BRCA2', 'BUB1B', 'RGCC', 'C1QBP', 'RABL6', 'CACNA1G', 'CADM1', 'CAMK1D', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNL1', 'CD274', 'CD34', 'CD44', 'CDC123', 'CDC20', 'CDC25A', 'CDC25C', 'CDC42', 'CDC45', 'CDC5L', 'CDC6', 'CDC7', 'CDH13', 'CDH17', 'CDH1', 'CDH2', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5RAP3', 'CDK6', 'CDK7', 'CDKAL1', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDX2', 'CEACAM5', 'CEBPB', 'CEBPE', 'CHEK1', 'CHEK2', 'CHFR', 'CHKA', 'COMMD1', 'CRABP1', 'CREBBP', 'CSF1R', 'CSF1', 'CSF2', 'CTBP1', 'CTBP2', 'CTCF', 'CTLA4', 'CTNNB1', 'CTSK', 'CUL1', 'CUL3', 'CXCR4', 'CYCS', 'CYLD', 'CYTH1', 'CYTH2', 'CYTH3', 'DAB2IP', 'DAP', 'DAXX', 'DICER1', 'DIRAS3', 'DLEC1', 'DMTF1', 'DNAH3', 'DNMT1', 'DNMT3A', 'DNMT3B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EBF1', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EP300', 'EPCAM', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ETS1', 'ETV6', 'EWSR1', 'EZH1', 'EZH2', 'FAT1', 'FBXW7', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FKBP2', 'FLT3', 'FMN2', 'FN1', 'FOS', 'FOXA1', 'FOXM1', 'FOXN2', 'FOXO1', 'FOXO3', 'FTO', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GATA4', 'GATA5', 'GBF1', 'GDF15', 'GGA1', 'GGA2', 'GGA3', 'GIT1', 'GIT2', 'GLI1', 'GLTSCR2', 'GMNN', 'GNA11', 'GNAQ', 'GNAS', 'GNL3', 'GOLPH3', 'GP5', 'GSPT1', 'GSTP1', 'H2AFX', 'H2AFZ', 'H3F3A', 'H3F3B', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC9', 'HELLS', 'HGF', 'HHEX', 'HIC1', 'HIF1A', 'HIST1H2BA', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AA3', 'HIST2H2AC', 'HIST2H4A', 'HIST4H4', 'HLTF', 'HMGA2', 'HNF4A', 'HNRNPD', 'HOPX', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA4', 'HSPA9', 'HUWE1', 'ID1', 'IDH1', 'IDH2', 'IGF1R', 'IGF1', 'IGF2BP2', 'IGF2R', 'IGF2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING4', 'INS', 'IQSEC1', 'IRS1', 'ISOC2', 'ITGAM', 'JAK1', 'JAK2', 'JAK3', 'JAZF1', 'JUNB', 'JUN', 'KAT2B', 'KAT5', 'KCNJ11', 'KCNQ1', 'KDM1A', 'KDM2B', 'KDM6A', 'KDM6B', 'KDR', 'KEAP1', 'KIAA1549', 'KIT', 'KLF4', 'KRAS', 'KRT19', 'KRT20', 'KRT5', 'KRT7', 'LATS2', 'LOX', 'LRRK2', 'MACROD2', 'MAF', 'MAP2K1', 'MAP2K4', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MAX', 'MC1R', 'MCL1', 'MCM10', 'MCM2', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEN1', 'MEOX1', 'MEOX2', 'MET', 'MGMT', 'MITF', 'MKRN1', 'MLANA', 'MLH1', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT3', 'MME', 'MMP2', 'MMP7', 'MMP9', 'MOV10', 'MRAS', 'MSH2', 'MSH6', 'MTA1', 'MTAP', 'MTHFR', 'MTNR1B', 'MTOR', 'MUC1', 'MYBL2', 'MYCL', 'MYCN', 'MYC', 'MYOD1', 'KAT6A', 'NANOG', 'NCAM1', 'NCL', 'NCOR1', 'NES', 'NEUROG1', 'NF1', 'NF2', 'NFATC1', 'NFE2L2', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NPM1', 'NRAS', 'NSUN2', 'ORC4', 'ORC5', 'OSBP2', 'P2RY8', 'PA2G4', 'PALB2', 'PARP1', 'PAX3', 'PAX5', 'PAX8', 'PBRM1', 'PCGF2', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PEX19', 'PGR', 'PHLDB1', 'PI3', 'PIAS2', 'PIGF', 'PIK3CA', 'PIK3R1', 'PIP4K2A', 'PLEKHA3', 'PLEKHA8', 'PLEK', 'PLK1', 'PMAIP1', 'PML', 'PMS2', 'POTEF', 'POU5F1', 'PPARA', 'PPARG', 'PPM1D', 'PPP1R9B', 'PPP3CA', 'PRDM2', 'PRMT6', 'PROM1', 'PRSS1', 'PSMC3', 'PSMD10', 'PSME3', 'PTCH1', 'PTEN', 'PTER', 'PTF1A', 'PTGS2', 'PTPN11', 'PTPRC', 'PTPRD', 'PXN', 'RAB11A', 'RAB5A', 'RABEP1', 'RABGEF1', 'RAC2', 'RAD51', 'RAF1', 'RAP2B', 'RARB', 'RASSF1', 'RASSF2', 'RB1', 'RBL1', 'RBL2', 'RCC1', 'RELA', 'RELB', 'REL', 'RET', 'RHOA', 'DROSHA', 'RNF2', 'RNF43', 'ROS1', 'RPL11', 'RPRM', 'RPS27A', 'RPS6KB1', 'RRAS2', 'RRAS', 'RTEL1', 'RUNX2', 'RUNX3', 'SDHC', 'SENP1', 'SENP3', 'SERPINE1', 'SERTAD1', 'SETD2', 'SFN', 'SFRP1', 'SFRP2', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SIX2', 'SKP2', 'SLC30A8', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SNAI1', 'SNAI2', 'SNCA', 'SOCS1', 'SOX2', 'SP1', 'SPEN', 'SRC', 'STAT1', 'STAT3', 'STK11', 'STK25', 'STK33', 'STMN1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUV39H1', 'SUZ12', 'SYNE1', 'SYP', 'TBL1XR1', 'TBRG1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TERT', 'TET2', 'TFDP1', 'TFPI2', 'TGFBR2', 'THADA', 'THBS1', 'TIMP3', 'TMCO1', 'TMEM115', 'TNFRSF10B', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TRADD', 'TRIM28', 'TRIP12', 'PRSS58', 'TSC2', 'TSPAN8', 'TTF1', 'TWIST1', 'TWSG1', 'TYR', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2I', 'UBE3A', 'UCHL1', 'USP7', 'UTF1', 'VEGFA', 'VHL', 'WDTC1', 'WEE1', 'WFS1', 'WHSC1', 'WIF1', 'WRN', 'WT1', 'WWOX', 'XRCC1', 'YY1', 'ZBTB17', 'ZBTB7A', 'ZEB1', 'ZFP91', 'ZNF148', 'ZNF217', 'ZNF227', 'ZNF410', 'ZNF420', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.9999999999999996 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 6.44540912783097e-14 NRMSE: 1.4570835600386503e-14 MAPE: 4.651033156962045e-11 Pearson Correlation: -0.028330134634649597 Spearman Correlation: 0.02023705004389816 Coefficient of Determination: -28.287602592334245 RMSE: 3.6444824378580885 NRMSE: 0.9845694936941022 MAPE: 2439.3811709920187 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 1.5653576089777268, tolerance: 0.023629428078437084 positive)
Pearson Correlation: 0.998519813696488 Spearman Correlation: 0.9977807686454024 Coefficient of Determination: 0.9969962413390763 RMSE: 0.036355655566654134 NRMSE: 0.008218753377790015 MAPE: 27.362803528844104 Pearson Correlation: 0.16018510634311103 Spearman Correlation: 0.14579553214320556 Coefficient of Determination: -12.701867676301038 RMSE: 2.4927793299965457 NRMSE: 0.6734329290027409 MAPE: 3011.476114593284 Predictor: RandomForests Pearson Correlation: 0.6662250351297693 Spearman Correlation: 0.6056399506504265 Coefficient of Determination: 0.4270984004578826 RMSE: 0.5020875813412392 NRMSE: 0.11350459621142514 MAPE: 162.86817303453486 Pearson Correlation: 0.7130276466122182 Spearman Correlation: 0.6239098624524437 Coefficient of Determination: 0.4680405453297999 RMSE: 0.4911715647647899 NRMSE: 0.13269169136718983 MAPE: 142.80948292933763 Protein: TP53 Protein Interaction Partners Count: 1000 x_train_column_count: 991 x_train columns: ['ABCB1', 'ABCC1', 'ABL1', 'ACTB', 'ACTL6A', 'ADAM17', 'AFP', 'AGT', 'AICDA', 'AIFM2', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD2', 'ANXA1', 'ANXA2', 'ANXA5', 'APAF1', 'APBB1', 'APC', 'APEX1', 'APOBEC3B', 'APP', 'ARID1A', 'ARID3A', 'AR', 'ASF1A', 'ASXL1', 'ATF2', 'ATF3', 'ATG7', 'ATM', 'ATN1', 'ATRIP', 'ATRX', 'ATR', 'ATXN3', 'AURKA', 'AURKB', 'AXIN1', 'AXL', 'BACE1', 'BAG1', 'BAG2', 'BAIAP2L1', 'BAK1', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2A1', 'BCL2L11', 'BCL2L12', 'BCL2L14', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BID', 'BIRC3', 'BIRC5', 'BIRC6', 'BLM', 'BMF', 'BMI1', 'BMX', 'BNIP3L', 'BNIP3', 'BRCA1', 'BRCA2', 'BRCC3', 'BRD1', 'BRD4', 'BRD7', 'BRE', 'BRIP1', 'BRPF1', 'BRPF3', 'BTG2', 'BTK', 'BUB1B', 'BUB1', 'RHNO1', 'RGCC', 'RMI2', 'CNOT11', 'SETD9', 'CA9', 'CABIN1', 'CABLES1', 'CAPN1', 'CARM1', 'CASP10', 'CASP1', 'CASP2', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBX2', 'CBX4', 'CBX6', 'CBX8', 'CCDC106', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNG2', 'CCNH', 'CCNK', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CD24', 'CD274', 'CD34', 'CD40LG', 'CD40', 'CD44', 'CD82', 'CDC20', 'CDC25A', 'CDC25C', 'CDH17', 'CDH1', 'CDK12', 'CDK13', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CEACAM5', 'CEBPB', 'CENPJ', 'CFL1', 'CFLAR', 'CHD3', 'CHD4', 'CHD8', 'CHEK1', 'CHEK2', 'CHUK', 'CISH', 'CITED2', 'CLSPN', 'CLU', 'CNOT10', 'CNOT1', 'CNOT2', 'CNOT3', 'CNOT4', 'CNOT6L', 'CNOT6', 'CNOT7', 'CNOT8', 'COPS5', 'CREB1', 'CREBBP', 'CRYAB', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK1G1', 'CSNK1G2', 'CSNK1G3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTCF', 'CTGF', 'CTNNB1', 'CUL4A', 'CUL7', 'CUL9', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP1A1', 'DACH1', 'DAPK1', 'DAP', 'DAXX', 'DDB1', 'DDB2', 'DDIT4', 'DDX17', 'DDX3X', 'DDX5', 'DECR1', 'DGCR8', 'DHCR24', 'DHFR', 'DIABLO', 'DICER1', 'DKK1', 'DMTF1', 'DNA2', 'DNAJA3', 'DNAJB1', 'DNMT1', 'DNMT3A', 'DNTT', 'DPYD', 'DRAM1', 'DTL', 'DUSP1', 'DUSP2', 'DYRK1A', 'DYRK2', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EEF1A1', 'EEF1A2', 'EGFR', 'EGF', 'EGR1', 'EHMT1', 'EHMT2', 'EI24', 'EIF2AK2', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4EBP1', 'ELANE', 'ELAVL1', 'ELL3', 'ELL', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHA3', 'EPHB2', 'ERBB2', 'ERBB4', 'ERCC1', 'ERCC2', 'ERCC3', 'ERCC6', 'ESR1', 'ETS1', 'ETS2', 'EWSR1', 'EXO1', 'EZH2', 'F2', 'FADD', 'AMER1', 'FAM175B', 'FANCC', 'FANCD2', 'FASLG', 'FAS', 'FBL', 'FBXO11', 'FBXO4', 'FBXW7', 'FGF1', 'FGF2', 'FGFR3', 'FHIT', 'FHL2', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FSCN1', 'FUT4', 'FZR1', 'G3BP1', 'G6PD', 'GADD45A', 'GADD45B', 'GADD45G', 'GAPDH', 'GATAD2A', 'GATAD2B', 'GDF15', 'GFI1', 'GLS2', 'GLTSCR2', 'GNL3', 'GRAMD4', 'GRB10', 'GRB14', 'GSK3B', 'GSTP1', 'GTF2H1', 'GTSE1', 'H1F0', 'H2AFX', 'HAMP', 'HCK', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC5', 'HDAC7', 'HDAC8', 'HDAC9', 'HERC5', 'HIC1', 'HIF1A', 'HIPK1', 'HIPK2', 'HIPK3', 'HIPK4', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HK2', 'HMGA1', 'HMGA2', 'HMGB1', 'HMGB2', 'HMMR', 'HMOX1', 'HNF4A', 'HNRNPK', 'HNRNPL', 'HOXA5', 'HPGDS', 'HRAS', 'HSF1', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA1A', 'HSPA1B', 'HSPA1L', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'HSPB1', 'HSPB2', 'HTT', 'HUS1', 'HUWE1', 'ICAM1', 'ID2', 'ID4', 'IDH1', 'IDH2', 'IFI16', 'IFNAR1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IGFBP7', 'IKBKB', 'IL17A', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING2', 'ING3', 'ING4', 'ING5', 'INSIG1', 'INS', 'IRF1', 'ISG15', 'ITPKB', 'JAG1', 'JAK2', 'JMY', 'JUN', 'KAT2A', 'KAT2B', 'KAT5', 'KDM1A', 'KDM6A', 'KDM6B', 'KDR', 'KHDRBS1', 'CCAR2', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KPNA2', 'KRAS', 'KRT14', 'KRT17', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'L3MBTL1', 'LAMA4', 'LEP', 'LGALS7B', 'LGALS7', 'LIF', 'LIG4', 'LIN28A', 'PIDD1', 'LRRK2', 'LYN', 'MAF1', 'MAF', 'MAGEA2', 'MAP1LC3B', 'MAP2K1', 'MAP2K3', 'MAP2K7', 'MAP3K1', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MBD3', 'MCL1', 'MCM7', 'MDC1', 'MDH1', 'MDM2', 'MDM4', 'MEAF6', 'MECOM', 'MELK', 'MET', 'MGMT', 'MIF', 'MKI67', 'MKRN1', 'MLH1', 'KMT2D', 'KMT2C', 'MMP13', 'MMP1', 'MMP2', 'MMP9', 'MOV10', 'MRE11A', 'MSH2', 'MSH6', 'MSX1', 'MT1A', 'MT2A', 'MTA1', 'MTA2', 'MTA3', 'MTOR', 'MUC1', 'MUTYH', 'MYBBP1A', 'MYB', 'MYCN', 'MYC', 'MYOCD', 'KAT8', 'KAT6A', 'NANOG', 'NBN', 'NCL', 'NCOA3', 'NCOR1', 'NCOR2', 'NDN', 'NDRG1', 'NEDD8', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFE2L2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NFKBIB', 'NFYA', 'NFYB', 'NFYC', 'NGFR', 'NKX2-1', 'NLK', 'NLRC4', 'NME1', 'NOC2L', 'NOS3', 'NOTCH1', 'NOTCH3', 'NOTCH4', 'NOX4', 'NPM1', 'NQO1', 'NR1I2', 'NR2E1', 'NR3C1', 'NR4A1', 'NR4A2', 'NRAS', 'NUAK1', 'NUMB', 'NUPR1', 'OGG1', 'OLIG2', 'OPN1SW', 'OSGIN1', 'OTUB1', 'OTUB2', 'OTUD5', 'PADI4', 'PALB2', 'PARK2', 'PARK7', 'PARP1', 'PATZ1', 'PAX2', 'PAX3', 'PAX8', 'PBK', 'PBRM1', 'PCBP4', 'PCNA', 'PDCD4', 'PDCD5', 'PDGFRA', 'PDGFRB', 'PDLIM7', 'PER2', 'PERP', 'PGR', 'PHB', 'PHC1', 'PHC2', 'PHC3', 'PHF20', 'PHGDH', 'PI3', 'PIAS1', 'PIAS2', 'PIAS4', 'PIK3CA', 'PIN1', 'PKM', 'PLAGL1', 'PLAU', 'PLK1', 'PLK2', 'PLK3', 'PLK4', 'PMAIP1', 'PML', 'PMS2', 'POLI', 'POLK', 'POU4F1', 'POU4F2', 'POU5F1', 'PPARGC1A', 'PPARG', 'PPIF', 'PPM1D', 'PPP1R13B', 'PPP1R13L', 'PPP1R15A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R4', 'PPP2R5C', 'PRDM1', 'PRDM2', 'PRDX1', 'PRELID1', 'PRIMA1', 'PRKAA1', 'PRKAA2', 'PRKAB1', 'PRKAB2', 'PRKAG1', 'PRKAG2', 'PRKAG3', 'PRKCA', 'PRKCD', 'PRKCZ', 'PRKD1', 'PRKDC', 'PRKG1', 'PRMT1', 'PRMT5', 'PROM1', 'PSEN1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTBP1', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2', 'PTTG1', 'RABGGTA', 'RABGGTB', 'RAD17', 'RAD1', 'RAD50', 'RAD51', 'RAD9A', 'RAD9B', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP4', 'RBBP6', 'RBBP7', 'RBBP8', 'RBL1', 'RBL2', 'RBM38', 'RBPJ', 'RCHY1', 'RCOR1', 'RECQL4', 'RELA', 'REM1', 'REST', 'RET', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RFFL', 'RFWD2', 'RING1', 'RMI1', 'DROSHA', 'RNF20', 'RNF2', 'RNF34', 'RNF43', 'ROCK1', 'RPA1', 'RPA2', 'RPA3', 'RPL11', 'RPL22', 'RPL26', 'RPL5', 'RPRM', 'RPS14', 'RPS19', 'RPS27A', 'RPS27L', 'RPS3', 'RPS6KB1', 'RQCD1', 'RRAD', 'RRM2B', 'RRM2', 'RUNX2', 'RUNX3', 'S100A2', 'S100A4', 'S100A6', 'S100B', 'SALL4', 'SCO2', 'SDHC', 'SENP1', 'SENP3', 'SERPINB5', 'SERPINE1', 'SESN1', 'SESN2', 'SESN3', 'SETD2', 'SETD7', 'SETD8', 'SETDB1', 'SFN', 'SRSF1', 'SGK1', 'SHFM1', 'SHH', 'SHISA5', 'SIK1', 'SIN3A', 'SIN3B', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SKP2', 'SLC2A14', 'SLC2A1', 'SLC2A2', 'SLC2A3', 'SLC6A6', 'SLMO1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMG1', 'SMG7', 'SMYD2', 'SNAI1', 'SNAI2', 'SOCS1', 'SOCS3', 'SOD2', 'SORT1', 'SOX2', 'SOX4', 'SP100', 'SP1', 'SP3', 'SP7', 'SPATA18', 'SPP1', 'SQSTM1', 'SRC', 'SREBF1', 'SREBF2', 'SSRP1', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STEAP3', 'STK11', 'STMN1', 'STUB1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUMO4', 'SUPT16H', 'SUV39H1', 'SUZ12', 'SYK', 'SYP', 'TADA3', 'TAF10', 'TAF11', 'TAF12', 'TAF13', 'TAF15', 'TAF1L', 'TAF1', 'TAF2', 'TAF3', 'TAF4B', 'TAF4', 'TAF5', 'TAF6', 'TAF7L', 'TAF7', 'TAF9B', 'TBPL1', 'TBPL2', 'TBP', 'TCHP', 'TCP1', 'TDG', 'TERT', 'TET2', 'TFAM', 'TFAP2A', 'TFAP2C', 'TFDP1', 'TFF1', 'TGFB1', 'TGM2', 'THBS1', 'TIMP3', 'TLR3', 'TLR9', 'TMEM219', 'TNFAIP3', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF10C', 'TNFRSF10D', 'TNF', 'TNK2', 'TNKS1BP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOE1', 'TOP1', 'TOP2A', 'TOP3A', 'TOPBP1', 'TOPORS', 'TP53AIP1', 'TP53BP1', 'TP53BP2', 'TP53I3', 'TP53INP1', 'TP53RK', 'TP63', 'TP73', 'TPT1', 'TPX2', 'TRAF6', 'TRIAP1', 'TRIM24', 'TRIM28', 'TRIM29', 'TRIM32', 'TRIM59', 'TRIM8', 'TRRAP', 'TSC2', 'TTC5', 'TTK', 'TWIST1', 'TWIST2', 'TXN', 'TYMS', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2D1', 'UBE2E1', 'UBE2I', 'UBE2K', 'UBE2N', 'UBE2Q1', 'UBE2S', 'UBE3A', 'UBN1', 'UCHL1', 'UHRF1', 'USF1', 'USP10', 'USP15', 'USP24', 'USP3', 'USP42', 'USP7', 'UTP14A', 'VEGFA', 'VHL', 'VPRBP', 'VRK1', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WWOX', 'XAF1', 'XIAP', 'XPA', 'XPO1', 'XRCC1', 'XRCC5', 'XRCC6', 'YBX1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'YY1', 'YY2', 'ZBTB33', 'ZBTB7A', 'ZEB1', 'ZEB2', 'ZKSCAN4', 'ZNF148', 'ZNF274', 'ZNF385A', 'ZNF420', 'ZNF668', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 5.746364481417e-15 NRMSE: 1.5391360603768583e-15 MAPE: 8.807335941089447e-12 Pearson Correlation: -0.12560856626302652 Spearman Correlation: -0.0395668715247293 Coefficient of Determination: -11.039723240877823 RMSE: 1.4204912767168938 NRMSE: 0.46780545915260785 MAPE: 8088.069533738892 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.2825669208052592, tolerance: 0.011132998655991638 positive)
Pearson Correlation: 0.9999772300280176 Spearman Correlation: 0.9999249291006211 Coefficient of Determination: 0.9999487063987238 RMSE: 0.003260997990951485 NRMSE: 0.0008734426117454091 MAPE: 5.6354680210345744 Pearson Correlation: -0.21607951530580813 Spearman Correlation: -0.04084479562969467 Coefficient of Determination: -6.383039950953711 RMSE: 1.1123665696197915 NRMSE: 0.3663318194038503 MAPE: 7330.814713147596 Predictor: RandomForests Pearson Correlation: 0.6760856663874204 Spearman Correlation: 0.5828389256744891 Coefficient of Determination: 0.3816544637315291 RMSE: 0.35804247493664515 NRMSE: 0.09589995311012325 MAPE: 342.13075090349093 Pearson Correlation: 0.6064388444662423 Spearman Correlation: 0.4688340241252622 Coefficient of Determination: 0.29913669860842074 RMSE: 0.3427259422941701 NRMSE: 0.11286874437482959 MAPE: 1906.2089208927212 Protein: CTNNB1 Protein Interaction Partners Count: 992 x_train_column_count: 984 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACAN', 'ACP1', 'ACTA1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTN4', 'ACVR1B', 'ACVR1', 'ADAM10', 'ADCY7', 'ADIPOQ', 'AES', 'AFP', 'AHI1', 'AHR', 'AHSA1', 'AJAP1', 'AK9', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'ALPL', 'AMHR2', 'AMH', 'ANXA5', 'AP1M1', 'APC2', 'APCS', 'APC', 'APH1A', 'APH1B', 'AQP1', 'ARHGAP10', 'ARHGAP21', 'ARHGAP32', 'ARHGEF4', 'ARID1A', 'ARID2', 'ARMC7', 'ARMC8', 'ARVCF', 'ARX', 'AR', 'ASCL1', 'ASF1A', 'ASH2L', 'ASIP', 'ATF4', 'ATM', 'AURKA', 'AXIN1', 'AXIN2', 'BAG3', 'BCAR1', 'BCL2L1', 'BCL3', 'BCL6', 'BCL9L', 'BCL9', 'BDNF', 'BGLAP', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BMPR1B', 'BNIP2', 'BRAF', 'BRCA1', 'BRCA2', 'BRMS1L', 'BTRC', 'HILPDA', 'AK8', 'CA2', 'CA9', 'CABLES1', 'CACYBP', 'CALM1', 'CALM3', 'CARM1', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBLL1', 'CBL', 'CBY1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CD24', 'CD34', 'CD40', 'CD44', 'CDC27', 'CDC42', 'CDC73', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH16', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH26', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDHR5', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK8', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDON', 'CDX1', 'CDX2', 'CEBPA', 'CHD8', 'CHRD', 'CHUK', 'CITED1', 'CKAP5', 'CLCA1', 'CLDN3', 'CLDN5', 'COL1A1', 'COPS3', 'COPS5', 'COPS6', 'CREB1', 'CREBBP', 'CRKL', 'CRK', 'CRP', 'CRYAB', 'CSNK1A1L', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK2A3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNAL1', 'CTNNBIP1', 'CTNND1', 'CTNND2', 'CTTN', 'CUL1', 'CUL4A', 'CUL4B', 'CXCR4', 'CXXC4', 'DAB2', 'DACT1', 'DACT2', 'DACT3', 'DCT', 'DCX', 'DDB1', 'DDX39A', 'DDX3X', 'DDX5', 'DHODH', 'DHX9', 'DKK1', 'DKK2', 'DKK3', 'DKK4', 'DLG1', 'DLG2', 'DLG4', 'DLG5', 'DLGAP1', 'DLL4', 'DLX1', 'DNM2', 'DNMT1', 'DPYD', 'DSC1', 'DSC2', 'DSC3', 'DSG1', 'DSG2', 'DSG3', 'DSG4', 'DSP', 'DUSP6', 'DVL1', 'DVL2', 'DVL3', 'E2F3', 'ECM1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'ELAVL1', 'EMD', 'ENAH', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHB2', 'EPHB3', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EXOC3', 'EXOC4', 'EYA4', 'EZH2', 'EZR', 'F2RL2', 'FAF1', 'AMER1', 'FANCA', 'FASLG', 'FAS', 'FAT1', 'FAT4', 'FBXW11', 'FBXW7', 'FERMT2', 'FER', 'FGF10', 'FGF13', 'FGF2', 'FGF3', 'FGF4', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FLT3', 'FMN1', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC2', 'FOXG1', 'FOXL1', 'FOXL2', 'FOXM1', 'FOXN3', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FRAT1', 'FRAT2', 'FRZB', 'FSCN1', 'FSTL1', 'FSTL3', 'FURIN', 'FUS', 'FXR1', 'FYN', 'FZD10', 'FZD1', 'FZD2', 'FZD3', 'FZD4', 'FZD5', 'FZD6', 'FZD7', 'FZD8', 'FZD9', 'GAPDH', 'GATA2', 'GATA4', 'GCG', 'GDF2', 'GDNF', 'GFRA1', 'GJA1', 'GLI1', 'GLI2', 'GLI3', 'GLIS2', 'GLUL', 'GNA11', 'GNA12', 'GNA13', 'GNAQ', 'GNAS', 'GPC3', 'GRIA2', 'GRIP1', 'GSK3A', 'GSK3B', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HAS2', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC7', 'HERC5', 'HES7', 'HGF', 'HGS', 'HHEX', 'HIC1', 'HIF1A', 'HINT1', 'HIPK2', 'HIST1H1C', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HMGB1', 'HNF1A', 'HNF4A', 'HNRNPA1', 'HNRNPA2B1', 'HNRNPK', 'HNRNPM', 'HOXA10', 'HOXB4', 'HPGD', 'HRAS', 'HSP90AB1', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPD1', 'HTRA1', 'HTT', 'HUWE1', 'IBSP', 'IDH1', 'IDH2', 'IFNB1', 'IFRD1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP4', 'IHH', 'IKBKB', 'IL6', 'CXCL8', 'ILK', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IRF3', 'ISG15', 'ISL1', 'ITGAE', 'ITGB1', 'ITGB7', 'ITK', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'AJUBA', 'JUN', 'JUP', 'KANK1', 'KAT2A', 'KAT2B', 'KAT5', 'KCNN1', 'KCTD1', 'KDM1A', 'KDR', 'KIF18B', 'KIF3A', 'KIF5B', 'KIFC3', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KRAS', 'KREMEN1', 'KRIT1', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LATS2', 'LDB1', 'LDHB', 'LDLR', 'LEF1', 'LEO1', 'LGR4', 'LGR5', 'LGR6', 'LHCGR', 'LHX8', 'LIF', 'LIMA1', 'LMNA', 'LMNB1', 'LOX', 'LRP4', 'LRP5L', 'LRP5', 'LRP6', 'LRRFIP1', 'LRRK2', 'LZTFL1', 'MACF1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8IP1', 'MAPK8', 'MAPK9', 'MDFIC', 'MDFI', 'MDK', 'MDM2', 'MED12', 'MED1', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'KMT2D', 'MLLT10', 'MLLT11', 'MLLT4', 'MLLT6', 'KMT2A', 'MME', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP25', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MRAP', 'MSH2', 'MSH6', 'MSN', 'MSX1', 'MSX2', 'MTDH', 'MTOR', 'MUC13', 'MUC1', 'MUTYH', 'MYCN', 'MYC', 'MYF5', 'MYO1D', 'MYO6', 'MYO7A', 'MYOD1', 'MYOG', 'NANOG', 'NCAM1', 'NCCRP1', 'NCOA2', 'NCSTN', 'NDP', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEURL2', 'NF1', 'NF2', 'NFAT5', 'NFKB1', 'NIT1', 'NKD1', 'NKX2-5', 'NLK', 'NME1', 'NOG', 'NONO', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR0B1', 'NR4A1', 'NR4A2', 'NR5A1', 'NR5A2', 'NRAS', 'NRIP1', 'NTRK1', 'NTRK2', 'NTRK3', 'NUDT5', 'NUMB', 'NUP153', 'NUTF2', 'OTX2', 'PAK1', 'PAK2', 'PAK3', 'PANK4', 'PARD3', 'PARD6A', 'PARK2', 'PARP1', 'PAX3', 'PAX6', 'PAX7', 'PAX8', 'PDGFRA', 'PDGFRB', 'PECAM1', 'PGK1', 'PGR', 'PHB', 'JADE1', 'PI3', 'PICK1', 'PIK3CA', 'PIK3R1', 'PIK3R2', 'PIN1', 'PIP5K1A', 'PIP5K1C', 'PITX2', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAG1', 'PLEKHA7', 'PLK1', 'PML', 'PMS2', 'POLE', 'PORCN', 'POTEF', 'POU5F1', 'PPARD', 'PPARG', 'PPM1A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R2B', 'PPP2R5A', 'PPP2R5B', 'PPP2R5C', 'PPP2R5D', 'PPP2R5E', 'PRKACA', 'PRKACB', 'PRKACG', 'PRKAR1A', 'PRKCA', 'PRKCG', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRL', 'PRMT1', 'PROC', 'PROM1', 'PROP1', 'PSEN1', 'PSEN2', 'PSENEN', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTEN', 'PTGES3', 'PTGS2', 'PTH1R', 'PTH', 'PTK2', 'PTK7', 'PTMA', 'PTN', 'PTPN11', 'PTPN13', 'PTPN1', 'PTPN6', 'PTPRB', 'PTPRC', 'PTPRF', 'PTPRG', 'PTPRJ', 'PTPRK', 'PTPRM', 'PTPRU', 'PTPRZ1', 'PVRL1', 'PVRL2', 'PXN', 'PYGO1', 'PYGO2', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RALGDS', 'RANBP3', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RAPGEF2', 'RAPGEF6', 'RAPSN', 'RARA', 'RARB', 'RARG', 'RARS', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP5', 'RBMX', 'RBPJ', 'RBX1', 'RELA', 'REM1', 'RET', 'RHOA', 'RIPK2', 'RNF220', 'RNF43', 'ROBO1', 'ROCK1', 'ROCK2', 'ROR2', 'RPRD1A', 'RPS27A', 'RPSA', 'RSPO1', 'RSPO2', 'RSPO3', 'RSPO4', 'RUNX2', 'RUNX3', 'RUVBL1', 'RUVBL2', 'RXRA', 'RYK', 'S100A4', 'S100A6', 'SALL1', 'SALL4', 'SATB1', 'SCRIB', 'SDHC', 'SERPINE1', 'SETD2', 'SETD7', 'SFN', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHFM1', 'SHH', 'SIAH1', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT6', 'SKP1', 'SLC6A3', 'SLC9A3R1', 'SLCO1B3', 'SLCO2A1', 'SLIT1', 'SLK', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD5', 'SMAD7', 'SMAD9', 'SMARCA2', 'SMARCA4', 'SMARCA5', 'SMARCB1', 'SMO', 'SMURF1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNX1', 'SOST', 'SOX10', 'SOX13', 'SOX17', 'SOX1', 'SOX2', 'SOX3', 'SOX4', 'SOX6', 'SOX7', 'SOX8', 'SOX9', 'SP1', 'SP7', 'SPAG9', 'SPATA13', 'SPEN', 'SPN', 'SPP1', 'SRC', 'STAT3', 'STK11', 'STRAP', 'STX4', 'SUFU', 'SUV39H1', 'SYP', 'TADA3', 'TAX1BP3', 'TAZ', 'TBL1XR1', 'TBL1X', 'TBX5', 'TBX6', 'TCF12', 'TCF3', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TFAP2A', 'TFCP2', 'TFF1', 'TFF2', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBR1', 'TGFBR2', 'TGM2', 'TJP1', 'TJP2', 'TLE1', 'TLE2', 'TLE3', 'TLE4', 'TNFRSF11B', 'TNFSF11', 'TNF', 'TNIK', 'TNKS2', 'TNKS', 'TNS1', 'TOB1', 'TOP2A', 'TP53', 'TRAF4', 'TRIM33', 'TRIM37', 'TRIP10', 'TRRAP', 'TSC2', 'TUBA1A', 'TWIST1', 'TYMS', 'T', 'UBA52', 'UBB', 'UBC', 'UBE2B', 'UBE2R2', 'UBE3A', 'UBR5', 'UCHL1', 'UMPS', 'UPRT', 'USP4', 'USP7', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VAV2', 'VAV3', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VHL', 'VIM', 'WDR64', 'WDTC1', 'WHSC1', 'WIF1', 'WISP1', 'WLS', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'WWTR1', 'XPO1', 'YAP1', 'YARS', 'YEATS4', 'YES1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'ZAP70', 'ZAR1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZIC3', 'ZNRF3', 'ZYX', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 2.0119448589752815e-14 NRMSE: 3.95740530876334e-15 MAPE: 4.206120985892252e-11 Pearson Correlation: 0.09722133406779569 Spearman Correlation: 0.289366891035021 Coefficient of Determination: -20.330017434357636 RMSE: 3.540194644039722 NRMSE: 0.8810618561110282 MAPE: 750.6696300734496 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.4157679921559207, tolerance: 0.028224784501103505 positive)
Pearson Correlation: 0.9999885274066047 Spearman Correlation: 0.9999722770422793 Coefficient of Determination: 0.9999754156196523 RMSE: 0.003594659906022739 NRMSE: 0.0007070534826952674 MAPE: 1.818645589606513 Pearson Correlation: 0.13673144895751083 Spearman Correlation: 0.22011511072090528 Coefficient of Determination: -6.282887239787224 RMSE: 2.0686324279782715 NRMSE: 0.5148285079958865 MAPE: 1022.999283630635 Predictor: RandomForests Pearson Correlation: 0.6752394208716751 Spearman Correlation: 0.6306516450727567 Coefficient of Determination: 0.4446434237391931 RMSE: 0.5402740818718719 NRMSE: 0.10626948895984892 MAPE: 418.6490648898317 Pearson Correlation: 0.5555587642331372 Spearman Correlation: 0.5261633011413521 Coefficient of Determination: 0.26095443840487087 RMSE: 0.6589722737741187 NRMSE: 0.16400096408106288 MAPE: 185.54982769552925 Protein: CCNE1 Protein Interaction Partners Count: 350 x_train_column_count: 347 x_train columns: ['ABL1', 'AKT1', 'AKT2', 'AKT3', 'ALDH18A1', 'ANAPC10', 'ANAPC13', 'ANAPC1', 'ANAPC2', 'ANAPC4', 'ANAPC5', 'ANAPC7', 'ANXA5', 'ARID1A', 'AR', 'ATM', 'AURKA', 'AURKB', 'BARD1', 'BCL2L1', 'BIRC5', 'BRCA1', 'BRCA2', 'BTG2', 'BTRC', 'BUB1B', 'BUB1', 'BUB3', 'RGCC', 'MLIP', 'CABLES1', 'CALM1', 'CAPRIN1', 'CASP3', 'CASP9', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNF', 'CCNG1', 'CCNH', 'CCNK', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CDC16', 'CDC20', 'CDC23', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC26', 'CDC27', 'CDC45', 'CDC6', 'CDC7', 'CDCA2', 'CDCA5', 'CDCA8', 'CDH1', 'CDK12', 'CDK13', 'CDK14', 'CDK15', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CENPA', 'CENPE', 'CHAF1A', 'CHD1L', 'CHEK1', 'CHEK2', 'CINP', 'CKS1B', 'CKS2', 'COPS5', 'CREBBP', 'CSK', 'CTNNB1', 'CUL1', 'CUL3', 'CUL4B', 'DBF4B', 'DBF4', 'DGCR8', 'DICER1', 'DTL', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'EBNA1BP2', 'ECT2', 'EGFR', 'EGF', 'ELAVL1', 'ELSPBP1', 'EP400', 'ERBB2', 'ERBB3', 'ERBB4', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM58A', 'FAM83H', 'FBXO5', 'FBXW7', 'FEN1', 'FGFR1', 'FGFR2', 'FGFR3', 'FOXM1', 'FZR1', 'GAPDH', 'GLI1', 'GMNN', 'GSK3B', 'H1F0', 'HDAC1', 'HEATR3', 'HERC5', 'HIST1H1A', 'HIST1H1B', 'HIST1H4A', 'HRAS', 'IFNAR1', 'IGF1R', 'IGF1', 'ITPKB', 'JUN', 'KIF11', 'KIF20A', 'KIF23', 'KIF2C', 'KPNA2', 'KRAS', 'LATS2', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'GMNC', 'MAD2L1', 'MAPK3', 'MATK', 'MAX', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDM2', 'MEGF11', 'MELK', 'MKI67', 'KMT2D', 'KMT2B', 'MNAT1', 'MRE11A', 'MTOR', 'MYBL2', 'MYC', 'NBN', 'NF1', 'NFYB', 'NMI', 'NOTCH1', 'NOTCH3', 'NPAT', 'NRAS', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PARK2', 'PARP1', 'PCBP4', 'PCNA', 'PIK3CA', 'PIK3R1', 'PKMYT1', 'PLK1', 'PLK4', 'POLA1', 'POLD1', 'PPP1R1C', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R4', 'PRC1', 'PRKAR1A', 'PRKAR2A', 'PRMT5', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB10', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSMF1', 'PTEN', 'PTGDR', 'PTK6', 'PTTG1', 'RAD51', 'RAD54L', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RBX1', 'REL', 'REM1', 'RHOA', 'RHOBTB3', 'RINT1', 'RNASE1', 'RPRD1A', 'RPS27A', 'RRM1', 'RRM2', 'RRN3', 'RSF1', 'SHFM1', 'SKP1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'ST8SIA1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STK3', 'STK4', 'TARBP1', 'TCP1', 'TERF1', 'TERT', 'TFDP1', 'TK1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TPX2', 'TTK', 'TUBG1', 'TYMS', 'UBA52', 'UBB', 'UBC', 'UBE2C', 'UBE2QL1', 'UBE2S', 'UHRF2', 'WEE1', 'WEE2', 'XIAP', 'YAP1', 'ZNF217', 'ZNF33A', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.9601705041265896 Spearman Correlation: 0.8730487935079695 Coefficient of Determination: 0.9219273969947087 RMSE: 0.14328301370685323 NRMSE: 0.03457852009239405 MAPE: 34.50111316465671 Pearson Correlation: 0.5651131566021976 Spearman Correlation: 0.41849575651155985 Coefficient of Determination: -1.5978149933861916 RMSE: 0.6741620141325072 NRMSE: 0.3663943902589184 MAPE: 80.27247289098734 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 5.807041982245542, tolerance: 0.014120986618491432 positive)
Pearson Correlation: 0.959269063144268 Spearman Correlation: 0.8705378414386756 Coefficient of Determination: 0.9201945537957995 RMSE: 0.14486439031593026 NRMSE: 0.034960154044918854 MAPE: 35.08188202775364 Pearson Correlation: 0.580247911675648 Spearman Correlation: 0.4547556335967223 Coefficient of Determination: -1.3502393607345748 RMSE: 0.6412335198434281 NRMSE: 0.3484983721886685 MAPE: 77.41288584395932 Predictor: RandomForests Pearson Correlation: 0.8617928485205313 Spearman Correlation: 0.7113946304957038 Coefficient of Determination: 0.7370044408538277 RMSE: 0.26297810132597776 NRMSE: 0.06346456097834731 MAPE: 68.09589031787966 Pearson Correlation: 0.834994290849563 Spearman Correlation: 0.7370695400035787 Coefficient of Determination: 0.694368986127278 RMSE: 0.23123782722461025 NRMSE: 0.12567341519497946 MAPE: 40.89069492026417 Protein: CCND1 Protein Interaction Partners Count: 857 x_train_column_count: 849 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTL6B', 'AFP', 'AHR', 'AKAP12', 'AKAP8', 'AKR1B10', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDOA', 'ALK', 'ANO1', 'ANXA5', 'APAF1', 'APC', 'APEX1', 'AREG', 'ARHGEF2', 'ARID1A', 'ARID1B', 'ARID2', 'ARID4A', 'AR', 'ASIP', 'ATF2', 'ATF3', 'ATF4', 'ATM', 'ATXN1', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'B2M', 'BANP', 'BARX2', 'BAX', 'BCAR1', 'BCAR3', 'BCCIP', 'BCL2A1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL3', 'BCL6', 'BCL9', 'BECN1', 'BGLAP', 'BHLHE40', 'BIRC2', 'BIRC3', 'BIRC5', 'BMI1', 'BMP4', 'BMP6', 'BRAF', 'BRCA1', 'BRCA2', 'BRD2', 'BRD4', 'BTC', 'BTG2', 'BTRC', 'RGCC', 'COPRS', 'CA9', 'CARD11', 'CARM1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBFB', 'CCDC62', 'CCL2', 'CCL5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNC', 'CCND2', 'CCND3', 'CCNDBP1', 'CCNE1', 'CCNE2', 'CCNG2', 'CCNH', 'CCNK', 'CCNL1', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CD19', 'CD22', 'CD24', 'CD34', 'CD38', 'CD44', 'CD5', 'CD79A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC6', 'CDC73', 'CDCA7L', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK12', 'CDK13', 'CDK14', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK20', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CDX2', 'CENPE', 'CEP57', 'CFLAR', 'CHEK1', 'CHEK2', 'CHKA', 'CHUK', 'CKS1B', 'CKS2', 'CLCN3', 'COL1A1', 'CR2', 'CREB1', 'CREBBP', 'CRKL', 'CRYAB', 'CSF2', 'CTBP1', 'CTGF', 'CTNNB1', 'CTNND1', 'CTTN', 'CUL1', 'CUL3', 'CUL7', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'CYR61', 'DACH1', 'DAXX', 'DDIT3', 'DDX53', 'DECR1', 'DHFR', 'DICER1', 'DKK1', 'DKK3', 'DLL1', 'DMTF1', 'DND1', 'DNMT1', 'DNMT3A', 'DNTT', 'DVL1', 'DVL2', 'DYRK1A', 'DYRK1B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EDN1', 'EEF1A1', 'EGFR', 'EGF', 'EGLN2', 'EGR1', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF3I', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4E', 'EIF4G1', 'ELAVL1', 'ELSPBP1', 'EP300', 'EPCAM', 'EPHA2', 'EPHA7', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EWSR1', 'EYA1', 'EZH2', 'FABP4', 'FADD', 'FAM58A', 'FAM83H', 'FASLG', 'FAT1', 'FBXO31', 'FBXO4', 'FBXW7', 'FBXW8', 'FGF13', 'FGF19', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FHL2', 'FIGF', 'FLCN', 'FLNA', 'FLT1', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXC1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FRZB', 'FSTL3', 'FZD1', 'FZD2', 'FZD7', 'FZD9', 'FZR1', 'GADD45A', 'GAL', 'GAPDH', 'GAST', 'GATA3', 'GATA4', 'GDF15', 'GDF2', 'GGNBP2', 'GGT1', 'GIT1', 'GJA1', 'GJB1', 'GLI1', 'GLI2', 'GLI3', 'GLTSCR2', 'GNB2L1', 'GPER1', 'GRB2', 'GREB1', 'GRM4', 'GRP', 'GSK3B', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HBEGF', 'HBZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC4', 'HEXIM1', 'HEY1', 'HGF', 'HIF1A', 'HIST1H2AA', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AH', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AC', 'HIST2H2BE', 'HIST2H4A', 'HIST4H4', 'HMGA2', 'HMOX1', 'HNF1A', 'HNF4A', 'HNRNPD', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB8', 'ICAM1', 'ID1', 'ID2', 'IFNAR1', 'IFNB1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP3', 'IGFBP5', 'IHH', 'IKBKB', 'IL10', 'IL17A', 'IL2', 'IL4', 'IL6', 'IL7', 'CXCL8', 'ILK', 'INSM1', 'INS', 'IRF1', 'IRS1', 'ISG15', 'ITGB1', 'ITPKB', 'ITPKC', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUNB', 'JUND', 'JUN', 'KAT2A', 'KAT2B', 'KDM1A', 'KDM5B', 'KDR', 'KHDRBS1', 'KIF18B', 'KIN', 'KITLG', 'KIT', 'KLF13', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KRAS', 'KRT10', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LDB3', 'LEF1', 'LEP', 'LGALS3', 'LGR5', 'LIMK2', 'LIMS1', 'LIN28B', 'LMNA', 'LMNB1', 'LOX', 'LRP5', 'LRP6', 'LYN', 'MAFB', 'MAF', 'MAML1', 'MAML2', 'MAML3', 'MAMLD1', 'MAP2K1', 'MAP2K2', 'MAP2K4', 'MAP2K7', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDK', 'MDM2', 'MDM4', 'MEN1', 'MET', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'MLXIPL', 'MME', 'MMP11', 'MMP14', 'MMP15', 'MMP1', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MNAT1', 'MOV10', 'MSH2', 'MST1', 'MTOR', 'MUC1', 'MYBL2', 'MYB', 'MYCN', 'MYC', 'MYEOV', 'MYF5', 'MYOD1', 'MYOG', 'NACA2', 'NADSYN1', 'NANOG', 'NCAM1', 'NCOA1', 'NCOA3', 'NCOR1', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NGF', 'NKX2-1', 'NME1-NME2', 'NME1', 'NME2', 'NMI', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NQO1', 'NR0B2', 'NR1H3', 'NR2E1', 'NR3C1', 'NR4A3', 'NRAS', 'NRF1', 'NUDT21', 'ODC1', 'ORAI1', 'ORAOV1', 'ORC4', 'PAK1', 'PAK4', 'PARK2', 'PARP1', 'PAX2', 'PAX5', 'PAX6', 'PBRM1', 'PBX3', 'PCNA', 'PDCD4', 'PDGFRA', 'PDGFRB', 'PDZK1', 'PECAM1', 'PELP1', 'PGR', 'PI3', 'PI4K2A', 'PIK3CA', 'PIK3R1', 'PKLR', 'PKM', 'PLAUR', 'PLAU', 'PLK1', 'PMAIP1', 'POLR2A', 'POTEF', 'POU2F1', 'POU5F1', 'PPARG', 'PPP2R4', 'PRDM5', 'PRKACA', 'PRL', 'PRMT5', 'PRNP', 'PROM1', 'PSAT1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTCHD3', 'PTEN', 'PTF1A', 'PTGS2', 'PTHLH', 'PTH', 'PTK2', 'PTK6', 'PTPN11', 'PTPRCAP', 'PTPRC', 'PXN', 'RAD51', 'RAF1', 'RALA', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RBX1', 'RCC1', 'RELA', 'RELB', 'REL', 'REM1', 'RET', 'RHEB', 'RHOA', 'RHOC', 'RICTOR', 'RNASE1', 'DROSHA', 'RND3', 'RNMT', 'ROCK1', 'RPRD1B', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KA6', 'RPS6KB1', 'RPS6', 'RPTOR', 'RREB1', 'RSF1', 'RUNX1', 'RUNX2', 'RUNX3', 'SDC1', 'SDHC', 'SENP1', 'SERPINE1', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHC1', 'SHFM1', 'SHH', 'SIRT1', 'SIX1', 'SIX3', 'SKP1', 'SKP2', 'SLC25A16', 'SLC25A6', 'SLC2A1', 'SLC35B2', 'SLC39A4', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMO', 'SNAI1', 'SNAI2', 'SNCA', 'SNIP1', 'SNW1', 'SNX33', 'SOCS3', 'SOX11', 'SOX17', 'SOX2', 'SOX4', 'SOX6', 'SOX9', 'SP1', 'SPN', 'SPP1', 'SPRY1', 'SRC', 'SREBF1', 'STAT1', 'STAT3', 'STAT4', 'STAT5A', 'STAT5B', 'STAT6', 'STC2', 'STIM1', 'STK11', 'STK24', 'STMN1', 'SUFU', 'SULF2', 'SUV39H1', 'TAF1', 'TBP', 'TBX2', 'TCEAL7', 'TCF4', 'TCF7L2', 'TCF7', 'TERT', 'TET3', 'TFDP1', 'TFF1', 'TGFA', 'TGFB1', 'TGFBR2', 'THBS1', 'THRA', 'THRB', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLR9', 'TM4SF1', 'TMPRSS4', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF8', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP2A', 'TP53', 'TP63', 'TP73', 'TRPV2', 'TSC22D3', 'TSC2', 'TWIST1', 'TXN', 'TYMS', 'UBA52', 'UBA7', 'UBB', 'UBC', 'UBE2C', 'UBTF', 'URGCP', 'USP18', 'USP2', 'USP9X', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VIP', 'VRK1', 'WDR77', 'WDTC1', 'WEE1', 'WHSC1', 'WIF1', 'WISP1', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'XBP1', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YY1', 'ZBTB17', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.1655057851276963e-14 NRMSE: 7.00668373067353e-15 MAPE: 4.994493491153886e-11 Pearson Correlation: 0.12002633778136522 Spearman Correlation: 0.09023997658765 Coefficient of Determination: -9.679739691178925 RMSE: 0.7693809622535935 NRMSE: 0.5952381028761478 MAPE: 1382.149531449612 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.15527213265761736, tolerance: 0.003060830225233494 positive)
Pearson Correlation: 0.9998324258607604 Spearman Correlation: 0.9996978759546283 Coefficient of Determination: 0.9996409748822129 RMSE: 0.004523711442695647 NRMSE: 0.002719524499342107 MAPE: 8.71895252933189 Pearson Correlation: 0.06751688059729466 Spearman Correlation: 0.08227490000975515 Coefficient of Determination: -5.398133113359001 RMSE: 0.5955081888378465 NRMSE: 0.4607199579422592 MAPE: 1061.7910752045625 Predictor: RandomForests Pearson Correlation: 0.5897287080039353 Spearman Correlation: 0.5843404797931906 Coefficient of Determination: 0.3083193710793459 RMSE: 0.1985570374413439 NRMSE: 0.11936674889164728 MAPE: 495.1329249851251 Pearson Correlation: 0.2704944937479533 Spearman Correlation: 0.42988001170617507 Coefficient of Determination: 0.057348461081726754 RMSE: 0.22857919168491403 NRMSE: 0.1768422291304961 MAPE: 299.0876241555505 Protein: ERBB2 Protein Interaction Partners Count: 663 x_train_column_count: 657 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACPP', 'ACTA2', 'ACTB', 'ACTG1', 'ADAM10', 'ADAM17', 'ADRB2', 'AFP', 'AGRN', 'AKT1S1', 'AKT1', 'AKT2', 'ALB', 'ALDH1A1', 'ALK', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'ANO1', 'ANXA2', 'ANXA5', 'AP2B1', 'APP', 'AREG', 'ARHGEF11', 'ARHGEF12', 'ARID1A', 'ARL6IP5', 'AR', 'ATM', 'ATP2B2', 'AURKB', 'AXIN1', 'BAG1', 'BARD1', 'BCAR1', 'BCAR3', 'BCAS1', 'BCL2L11', 'BCL2L1', 'BDNF', 'BECN1', 'BEST1', 'BIRC5', 'BLNK', 'BMI1', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BSG', 'BTC', 'MIEN1', 'CA9', 'CALU', 'CARTPT', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAV1', 'CBLB', 'CBLC', 'CBL', 'CCL27', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD19', 'CD22', 'CD247', 'CD24', 'CD274', 'CD28', 'CD33', 'CD34', 'CD44', 'CD46', 'CD52', 'CD68', 'CD6', 'CD80', 'CD82', 'CDC37', 'CDC42', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK4', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CEACAM5', 'CEP70', 'CHEK2', 'CHGA', 'CHKA', 'CHKB', 'CISH', 'CLDN3', 'CLDN4', 'CLDN7', 'CLTC', 'CNN1', 'COPS5', 'CPNE3', 'CREB1', 'CRKL', 'CRK', 'YBX3', 'CSF1', 'CSF2', 'CSF3', 'CSK', 'CSPG4', 'CTAG1B', 'CTLA4', 'CTNNB1', 'CTNND1', 'CTSB', 'CTSD', 'CTTN', 'CUL5', 'CXCL12', 'CXCR1', 'CXCR4', 'CYCS', 'CYP19A1', 'CYTIP', 'DCN', 'DDX41', 'DDX53', 'DHH', 'DIAPH1', 'DICER1', 'DLG4', 'DMTF1', 'DNAJA3', 'DNM2', 'DNMT1', 'DOCK1', 'DOCK7', 'DUSP6', 'E2F1', 'E2F3', 'EEA1', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EGFR', 'EGF', 'EIF3A', 'EIF4EBP1', 'EIF4E', 'ELAVL1', 'ELF3', 'EML4', 'ENO2', 'EP300', 'EPCAM', 'EPGN', 'EPHA2', 'EPS15', 'EPX', 'ERAL1', 'ERBB2IP', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ERRFI1', 'ESCO1', 'ESR1', 'ESR2', 'ESRRB', 'ETS1', 'ETS2', 'ETV4', 'ETV6', 'EZH2', 'EZR', 'FASLG', 'FASN', 'FBXW7', 'FCGR1A', 'FCGR1B', 'FCGRT', 'FGF10', 'FGF13', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FIGF', 'FLT1', 'FLT3LG', 'FN1', 'FOLH1', 'FOLR1', 'FOS', 'FOXA1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXP3', 'FREM2', 'FSIP1', 'FYN', 'GAB1', 'GABPB1', 'GAPDH', 'GATA3', 'GATA4', 'GDF2', 'GLI1', 'GLI2', 'GLS', 'GNA11', 'GNAQ', 'GNAS', 'GNRH1', 'GPER1', 'GRAP2', 'GRB2', 'GRB7', 'GSTP1', 'GZMB', 'H2AFX', 'H2AFY', 'HBEGF', 'HDAC1', 'HDAC6', 'HEATR6', 'HGF', 'HIF1A', 'HK1', 'HLA-A', 'HMGA2', 'HNF4A', 'HOXB7', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPG2', 'ICAM1', 'ID1', 'IDH1', 'IDH2', 'IFNG', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IHH', 'IL10', 'IL2', 'IL4', 'IL6R', 'IL6ST', 'IL6', 'CXCL8', 'ILK', 'INPP4B', 'INS', 'IQGAP1', 'IQSEC1', 'IRS1', 'ITGA5', 'ITGA6', 'ITGAV', 'ITGB1', 'ITGB3', 'ITGB4', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JUN', 'JUP', 'KDR', 'KITLG', 'KLK3', 'KLRK1', 'KRAS', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'L1CAM', 'LAMP1', 'LCN2', 'LDHA', 'LEP', 'LIN28A', 'LIN7A', 'LIN7B', 'LIN7C', 'LINGO1', 'LOX', 'LRIG1', 'LRPPRC', 'MAGEA1', 'MAGEA3', 'MAGED4B', 'MAGED4', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK8', 'MATK', 'MCL1', 'MDK', 'MDM2', 'MEMO1', 'MET', 'MGMT', 'MKI67', 'MLANA', 'MLH1', 'KMT2C', 'MME', 'MMP11', 'MMP14', 'MMP16', 'MMP1', 'MMP2', 'MMP7', 'MMP9', 'MPP1', 'MRAP', 'MRAS', 'MSH2', 'MSH6', 'MSLN', 'MTA1', 'MTOR', 'MUC13', 'MUC16', 'MUC1', 'MUC4', 'MUC6', 'MUCL1', 'MYBL2', 'MYCN', 'MYC', 'NANOG', 'NCAM1', 'NCL', 'NCOA1', 'NCOA3', 'NCOR1', 'NDRG1', 'NF1', 'NF2', 'NFE2L2', 'NGF', 'NISCH', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NR1H4', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NRP1', 'NTF3', 'NTF4', 'OPCML', 'OSMR', 'PA2G4', 'PADI2', 'PAK1', 'PALB2', 'PAQR3', 'PARP1', 'PAX2', 'PCSK9', 'PDCD1LG2', 'PDCD1', 'PDCD4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PDGFRA', 'PDPN', 'PECAM1', 'PELP1', 'PEPD', 'PFKFB3', 'PGAP3', 'PGF', 'PGR', 'PI3', 'PIK3C2A', 'PIK3C2B', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIN1', 'PIP', 'PLAUR', 'PLAU', 'PLCG1', 'PLCG2', 'PLEK', 'PLG', 'PLXNB1', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPP3CA', 'PRDM10', 'PRF1', 'PRKACA', 'PRL', 'PROM1', 'PSCA', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'PTPN1', 'PTPRC', 'PTPRO', 'PTPRU', 'PTS', 'PXN', 'RAB25', 'RAD51', 'RAF1', 'RANBP2', 'RARA', 'RASA1', 'RASA2', 'RASSF1', 'RB1', 'RBPJ', 'RDX', 'RECK', 'REM1', 'REN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'S100A14', 'SCGB2A2', 'SCUBE2', 'SDC1', 'SDHC', 'SEMA3D', 'SEMA4D', 'SERPINB5', 'SERPINE1', 'SFRP1', 'PEAK1', 'SH3BGRL3', 'SH3BGRL', 'SH3TC2', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SIAH2', 'PMEL', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC4A7', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SMUG1', 'SMYD3', 'SNAI1', 'SNAI2', 'SOCS1', 'SOS1', 'SOX10', 'SOX2', 'SOX9', 'SP3', 'SPP1', 'SPRY2', 'SRCIN1', 'SRC', 'STARD3', 'STAT1', 'STAT2', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STOM', 'STUB1', 'SYP', 'TAGLN', 'TBX1', 'TERT', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TFRC', 'TGFA', 'TGFB1', 'THBS1', 'THRA', 'TIMP1', 'TJP1', 'TMPRSS2', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF4', 'TNFRSF8', 'TNFRSF9', 'TNFSF11', 'TNF', 'TNS1', 'TNS3', 'TNS4', 'TOB1', 'TOP1', 'TOP2A', 'TP53', 'TP63', 'TSC2', 'TWIST1', 'TYMS', 'TYR', 'UBA52', 'UBB', 'UBC', 'USP2', 'USP9X', 'VAV1', 'VAV2', 'VAV3', 'VCL', 'VEGFA', 'VEGFB', 'VEGFC', 'VIM', 'WASL', 'WDFY2', 'WDTC1', 'WNT10A', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7B', 'WNT9A', 'WNT9B', 'WT1', 'WWOX', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YES1', 'YY1', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 1.160917412745515e-13 NRMSE: 2.08337205955443e-14 MAPE: 6.403143597135894e-11 Pearson Correlation: 0.11236391577673448 Spearman Correlation: 0.053136279387376854 Coefficient of Determination: -25.60523545629214 RMSE: 5.453073668492433 NRMSE: 0.9290208474866574 MAPE: 8737.253615315789 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 1.0036256470569493, tolerance: 0.0518906404354321 positive)
Pearson Correlation: 0.9997880884156966 Spearman Correlation: 0.9992697683819548 Coefficient of Determination: 0.9995727442364918 RMSE: 0.020318953549247315 NRMSE: 0.0036464213249909937 MAPE: 15.405375018350936 Pearson Correlation: 0.2574532735277956 Spearman Correlation: 0.21750073163593797 Coefficient of Determination: -10.718496859368441 RMSE: 3.619043184872204 NRMSE: 0.6165635696666276 MAPE: 6330.853418698576 Predictor: RandomForests Pearson Correlation: 0.8552179643752656 Spearman Correlation: 0.7070736262574453 Coefficient of Determination: 0.7277264428403839 RMSE: 0.5129323675501023 NRMSE: 0.0920503862947261 MAPE: 255.91937889126447 Pearson Correlation: 0.7819357159654733 Spearman Correlation: 0.49868559632159526 Coefficient of Determination: 0.5924330275425123 RMSE: 0.6749277785461717 NRMSE: 0.11498505520659859 MAPE: 1549.7371408655852 Protein: ERBB3 Protein Interaction Partners Count: 245 x_train_column_count: 247 x_train columns: ['ADAM17', 'AGRN', 'AGTR2', 'AKT1', 'AKT2', 'AKT3', 'ALAS2', 'ALB', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'APIP', 'AREG', 'AR', 'BAMBI', 'BDNF', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BTC', 'CADM4', 'CASK', 'CASP3', 'CBLB', 'CBLC', 'CBL', 'CCND1', 'CCNE1', 'CD44', 'CD82', 'CDC42', 'CDH1', 'CDK4', 'CDK5', 'CDKN1B', 'CDKN2A', 'CLEC16A', 'COMMD5', 'COQ7', 'CRKL', 'CRK', 'CRYZL1', 'CSF1', 'CSK', 'CSPG5', 'CTNNB1', 'DCN', 'DHH', 'DOCK7', 'DUSP6', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EIF4EBP1', 'EIF4E', 'EML4', 'EPCAM', 'EPGN', 'EPN1', 'ERBB2IP', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'ESR2', 'FBXO9', 'FGF10', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FIGF', 'FKBP14', 'FLNA', 'FLT3LG', 'FN1', 'FOXA1', 'FOXO3', 'FREM2', 'FTSJ1', 'GAB1', 'GAPDH', 'GLE1', 'GRB2', 'GRB7', 'GRHL2', 'HBEGF', 'HGF', 'HGS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPG2', 'IGF1', 'IGF2', 'IL6ST', 'ILK', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'ITPKB', 'JAK1', 'JAK2', 'JUN', 'KDR', 'KITLG', 'KRAS', 'L1CAM', 'LAMA1', 'LAMB1', 'LAMC2', 'LIN7A', 'LIN7B', 'LIN7C', 'LRIG1', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARCH7', 'MDM2', 'MET', 'MITF', 'MMP9', 'MRPL49', 'MTOR', 'MUC1', 'MUC4', 'MYC', 'N4BP1', 'NDRG1', 'NEDD4L', 'NEDD4', 'NF1', 'NGF', 'NICN1', 'NOTCH1', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NTF3', 'NTF4', 'OAT', 'PA2G4', 'PARK7', 'PCSK9', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PGR', 'PI3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIP5K1C', 'PLCG1', 'PLCG2', 'PPP1R9A', 'PRKACA', 'PTEN', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN22', 'PTPN2', 'RASA1', 'RASA2', 'REM1', 'RGS4', 'RHOA', 'RHOC', 'RNF41', 'ROR1', 'RRAS2', 'SH2B3', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SLC25A16', 'SMAD4', 'SNAI2', 'SOS1', 'SOX10', 'SOX2', 'SPARC', 'SPRY2', 'SRC', 'STAT3', 'STAT5A', 'STAT5B', 'SYN3', 'TCF7L2', 'TGFA', 'TMEFF2', 'TNFRSF13C', 'TNS1', 'TP53', 'USP8', 'VAV1', 'VAV2', 'VAV3', 'VEGFA', 'VEGFB', 'VEGFC', 'WNT1', 'WNT5A', 'ZEB1', 'ZNF217', 'KRBOX4', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.7840835049604227 Spearman Correlation: 0.7768913942404723 Coefficient of Determination: 0.6147869427510211 RMSE: 0.27627421209242764 NRMSE: 0.07455848032568814 MAPE: 169.70890348644946 Pearson Correlation: 0.023749088782500927 Spearman Correlation: 0.1874646375963321 Coefficient of Determination: -3.08223256171544 RMSE: 1.0461413215338493 NRMSE: 0.3860884198472276 MAPE: 504.9456369954628 Predictor: ElasticNet Pearson Correlation: 0.7785901535984573 Spearman Correlation: 0.7653311709293977 Coefficient of Determination: 0.6061697432840049 RMSE: 0.27934724235654296 NRMSE: 0.07538780299301923 MAPE: 174.56578074320169 Pearson Correlation: 0.023757807745119285 Spearman Correlation: 0.227294898058726 Coefficient of Determination: -3.4124906589718744 RMSE: 1.087635526377058 NRMSE: 0.4014022514022631 MAPE: 482.3138147016743 Predictor: RandomForests Pearson Correlation: 0.5789425519444418 Spearman Correlation: 0.5770328254616109 Coefficient of Determination: 0.3094405582295372 RMSE: 0.3699051544179982 NRMSE: 0.09982678429942712 MAPE: 197.14907470637513 Pearson Correlation: 0.41826035781454896 Spearman Correlation: 0.4207737097294926 Coefficient of Determination: 0.16510252573364903 RMSE: 0.4731055676495301 NRMSE: 0.1746041163606044 MAPE: 362.5667723983798 Fold: 3 Protein: RB1 Protein Interaction Partners Count: 369 x_train_column_count: 366 x_train columns: ['AATF', 'ABCC1', 'ABL1', 'ACTL6A', 'ACTL6B', 'AFAP1', 'AHR', 'AKT1', 'ANXA5', 'ARID1A', 'ARID1B', 'ARID4A', 'ARMCX1', 'ARMCX2', 'ARMCX3', 'ARNT', 'AR', 'ASF1A', 'ATF2', 'ATM', 'AURKB', 'BCR', 'BDP1', 'BGLAP', 'BRCA1', 'BRF1', 'FAM208A', 'C4BPA', 'CABIN1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CBFB', 'CBX1', 'CBX4', 'CBX5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNT2', 'CDC25A', 'CDC27', 'CDC6', 'CDH1', 'CDK14', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPA', 'CEBPB', 'CEBPD', 'CEBPE', 'CHEK1', 'CHEK2', 'CLNK', 'COL1A1', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUX1', 'DCAF10', 'DGKZ', 'DNAJA3', 'DNMT1', 'DNMT3A', 'DUSP1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EGFR', 'EGF', 'EID1', 'EIF2AK1', 'EIF2AK4', 'AGO2', 'ELF1', 'ENC1', 'EP300', 'ERBB2', 'ESD', 'ESR1', 'ESR2', 'EZH2', 'FBXW7', 'FMO5', 'FOS', 'FOXM1', 'FRK', 'FZR1', 'G6PD', 'GAPDH', 'GATA1', 'GJA1', 'GNB2L1', 'GRB2', 'GSC', 'GTF2H1', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HARS2', 'HARS', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC8', 'HDC', 'HES1', 'HIF1A', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HIST4H4', 'HMGA1', 'HMGA2', 'HRAS', 'HSP90AA1', 'HSPA1A', 'HSPA8', 'ID2', 'IFI16', 'INS', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'KDM2A', 'KDM4A', 'KDM5A', 'KDM5B', 'PPP1R26', 'KIF11', 'KRAS', 'KRT10', 'KRT14', 'KRT5', 'L3MBTL2', 'L3MBTL1', 'LIMD1', 'LIN52', 'LIN54', 'LIN9', 'LMNA', 'LOR', 'LPAR6', 'MAF', 'MAP2K7', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEF2C', 'MORF4L1', 'MRFAP1', 'MRPL11', 'MRPS18B', 'MSH6', 'MTL5', 'MYBL2', 'MYC', 'MYOD1', 'NACC2', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NCR1', 'NDC80', 'NEO1', 'NFYA', 'NFYB', 'NFYC', 'NGF', 'NOTCH1', 'NPM1', 'NRAS', 'ORC1', 'PA2G4', 'PAX2', 'PAX3', 'PAX5', 'PAX6', 'PAX8', 'PCNA', 'PELP1', 'PGR', 'PHB', 'PHF21B', 'PIAS4', 'PIK3CA', 'PIK3R1', 'PIK3R3', 'PLK1', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPIA', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP1R3A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R3B', 'PPRC1', 'PRB1', 'PRB3', 'PRB4', 'PRDM2', 'PRH1', 'PRH2', 'PRIM1', 'PRIM2', 'PRKCB', 'PRMT2', 'PSMA7', 'PSMC1', 'PSMD10', 'PTEN', 'PTGDR', 'RAF1', 'RB1CC1', 'RBAK', 'RBBP4', 'RBBP5', 'RBBP6', 'RBBP7', 'RBBP8', 'RBBP9', 'RBL1', 'RBL2', 'RBFOX2', 'RFC1', 'RPS6KB1', 'RUNX2', 'S100A6', 'SETD1B', 'SETD7', 'SIRT1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMC1A', 'SMC2', 'SMC4', 'SMC5', 'SMYD2', 'SNW1', 'SP100', 'SP1', 'SP3', 'SPI1', 'STAM', 'STAT3', 'SUV39H1', 'SUV420H2', 'SUZ12', 'TAF1', 'TBP', 'TERT', 'TFAP2A', 'TFDP1', 'TFDP3', 'TGM2', 'THAP1', 'TMPO', 'TNS1', 'TOP2A', 'TP53BP1', 'TP53', 'TP73', 'TRDMT1', 'TRIM27', 'TTK', 'UBE2I', 'UBE3A', 'UBL4A', 'UBN1', 'UBR4', 'UBTF', 'UHRF1', 'USP4', 'USP7', 'VEGFA', 'VPS39', 'WDR59', 'WDR73', 'WEE1', 'WWTR1', 'YAP1', 'YY1', 'ZBTB16', 'ZBTB7A', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.8167097811843881 Spearman Correlation: 0.7621012808770368 Coefficient of Determination: 0.6670148666822513 RMSE: 0.13882702274981792 NRMSE: 0.050770561274801757 MAPE: 290.71593769762336 Pearson Correlation: -0.0028448413857654915 Spearman Correlation: 0.060541902018728416 Coefficient of Determination: -3.8026113525247753 RMSE: 0.4857759242122269 NRMSE: 0.34086189722569493 MAPE: 1264.838348371254 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 6.232729901296884, tolerance: 0.003113905664439024 positive)
Pearson Correlation: 0.7893622557276637 Spearman Correlation: 0.7318327868472206 Coefficient of Determination: 0.6228170865848435 RMSE: 0.14775343740225966 NRMSE: 0.054035048786666054 MAPE: 327.23338139378757 Pearson Correlation: 0.011408261559881259 Spearman Correlation: 0.07734510405366651 Coefficient of Determination: -2.9496072023652147 RMSE: 0.4405287108740028 NRMSE: 0.3091125860434784 MAPE: 1248.7190543953818 Predictor: RandomForests Pearson Correlation: 0.603978591035249 Spearman Correlation: 0.4517173845774052 Coefficient of Determination: 0.1786302313719249 RMSE: 0.21803737508853988 NRMSE: 0.07973865385040224 MAPE: 207.6690163505581 Pearson Correlation: 0.05449791794910446 Spearman Correlation: 0.1794411401638425 Coefficient of Determination: -0.046015379501774145 RMSE: 0.22670771524017264 NRMSE: 0.15907750483473387 MAPE: 208.21191034649345 Protein: CDH1 Protein Interaction Partners Count: 834 x_train_column_count: 826 x_train columns: ['ABCB1', 'ABCG2', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTR3', 'ACVR1B', 'ADAM10', 'ADAM15', 'ADAM17', 'ADAM9', 'AFP', 'AIMP1', 'AJAP1', 'AKAP9', 'AKT1', 'AKT2', 'AKTIP', 'ALB', 'ALCAM', 'ALDH1A1', 'ALDH3A1', 'ALK', 'AMOTL2', 'ANAPC4', 'ANAPC7', 'ANO1', 'ANXA2', 'ANXA5', 'AP1M1', 'AP1M2', 'APC2', 'APC', 'AQP1', 'AQP5', 'AREG', 'ARF6', 'ARHGAP31', 'ARID1A', 'ARL2BP', 'ARMC7', 'ARPC1A', 'ARPC2', 'ARRB2', 'ARVCF', 'AR', 'CLMP', 'ASF1A', 'ATF2', 'ATF3', 'ATM', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BAG3', 'BANP', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL6B', 'BCL9L', 'BCORL1', 'BMI1', 'BMP2', 'BMP4', 'BMP6', 'BMP7', 'BNIP3', 'BRCA1', 'BRCA2', 'BSG', 'BTBD7', 'BTC', 'BTF3', 'ANAPC15', 'CA2', 'CA9', 'CALCA', 'CALR', 'CAPN1', 'CAPNS1', 'CASP3', 'CASP8', 'CASP9', 'CASS4', 'CAV1', 'CBLL1', 'CBL', 'CBX7', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CCR7', 'CD1A', 'CD1B', 'CD1C', 'CD1E', 'CD207', 'CD24', 'CD274', 'CD276', 'CD2AP', 'CD34', 'CD44', 'CD46', 'CD68', 'CD82', 'CDC16', 'CDC23', 'CDC27', 'CDC42', 'CDC6', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH24', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK14', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN3', 'CDX2', 'CEACAM5', 'CFL1', 'CGN', 'CHGA', 'CHL1', 'CLCA2', 'CLDN1', 'CLDN2', 'CLDN3', 'CLDN4', 'CLDN5', 'CLDN7', 'CNTN1', 'COL1A1', 'CORO1C', 'CRB3', 'CREB1', 'CREBBP', 'CRYAB', 'YBX3', 'CSDC2', 'CSE1L', 'CSF2', 'CSNK2A1', 'CSNK2A2', 'CST5', 'CTBP1', 'CTBP2', 'CTCF', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTSL', 'CTTN', 'CXCL12', 'CXCL1', 'CXCR4', 'CYP1B1', 'DAAM1', 'DAB2IP', 'DACH1', 'DAPK1', 'DAP', 'DDR1', 'DDR2', 'DDX3X', 'DICER1', 'DKK1', 'DLC1', 'DLG1', 'DLG5', 'DNM2', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOT1L', 'DPAGT1', 'DPEP1', 'DSP', 'DUOX1', 'DUSP4', 'DVL1', 'DVL2', 'E2F1', 'ECT2', 'EDN1', 'EFEMP1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'EHD1', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'ELAVL1', 'ELF3', 'ENAH', 'ENG', 'EP300', 'EPB41L3', 'EPCAM', 'EPHA10', 'EPHA1', 'EPHA2', 'EPPK1', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ESRP1', 'ESRP2', 'ETS1', 'ETS2', 'EXOC3', 'EXOC4', 'EYA2', 'EZH2', 'EZR', 'F11R', 'F2RL2', 'SUPT20H', 'FBXL5', 'FER', 'FGF10', 'FGF13', 'FGF17', 'FGF19', 'FGF2', 'FGF4', 'FGF5', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FMN1', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC1', 'FOXC2', 'FOXJ2', 'FOXK2', 'FOXL1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXQ1', 'FRMPD2', 'FSCN1', 'FUT4', 'FXYD5', 'FYN', 'FZD1', 'FZD4', 'FZD7', 'FZR1', 'G6PD', 'GAB2', 'GABPA', 'GADD45A', 'GAPDH', 'GAS6', 'GATA1', 'GATA3', 'GATA4', 'GATA6', 'GDNF', 'GFRA1', 'GGT1', 'GJA1', 'GJB1', 'GJB2', 'GKN2', 'GLI1', 'GLI2', 'GMNN', 'GNA12', 'GNA13', 'GNB2L1', 'GNL3', 'GPA33', 'GRB2', 'GRHL2', 'GRHL3', 'GSK3B', 'GSN', 'GSTP1', 'H2AFZ', 'HAVCR2', 'HBEGF', 'HDAC1', 'HDAC2', 'HEPACAM', 'HES1', 'HGF', 'HGS', 'HIF1A', 'HMGA2', 'HNF4A', 'HOXB4', 'HOXD10', 'HPGDS', 'HPGD', 'HRAS', 'HSP90AA1', 'HSPA5', 'ICAM1', 'ID1', 'ID2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP3', 'IL10', 'IL15', 'IL17A', 'IL1B', 'IL24', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IQSEC1', 'IRS1', 'IRS2', 'ITGA5', 'ITGA6', 'ITGAE', 'ITGAM', 'ITGB1', 'ITGB4', 'ITGB7', 'ITPKB', 'IVL', 'JAG1', 'JAK2', 'AJUBA', 'JUN', 'JUP', 'KDM1A', 'KDM6A', 'KDR', 'KEAP1', 'KIFC3', 'KIT', 'KLF4', 'KLF5', 'KLF8', 'KLK3', 'KLK7', 'KLRG1', 'KRAS', 'KRT10', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'KRT9', 'LAMA1', 'LAMB1', 'LAMC2', 'LASP1', 'LATS1', 'LATS2', 'LCN2', 'LEF1', 'LEP', 'LGALS3', 'LGALS4', 'LGALS9', 'LGR5', 'LIF', 'LIMA1', 'LIN28A', 'LIPG', 'LLGL2', 'LMNA', 'LOR', 'LOXL2', 'LOXL3', 'LOX', 'LRP5', 'LRP6', 'LY6K', 'MACC1', 'MACROD1', 'MAD2L2', 'MAGI1', 'MAP2K1', 'MAP2K7', 'MAP4K5', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARK2', 'MARVELD2', 'MCAM', 'MCL1', 'MDM2', 'MED1', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGAT5', 'MGMT', 'MKI67', 'MLH1', 'MLLT4', 'MME', 'MMP11', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP1', 'MMP25', 'MMP27', 'MMP2', 'MMP3', 'MMP7', 'MMP8', 'MMP9', 'MPP5', 'MRAP', 'MSH2', 'MSN', 'MT1G', 'MTA1', 'MTA3', 'MTBP', 'MTDH', 'MTOR', 'MUC1', 'MUC4', 'MYCN', 'MYC', 'MYH6', 'MYO6', 'MYO7A', 'NANOG', 'NCAM1', 'NCOA1', 'NCSTN', 'NDRG1', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEUROG3', 'NF2', 'NFE2L2', 'NFIC', 'NKD2', 'NKX2-1', 'NKX6-1', 'NKX6-2', 'NME1', 'NOG', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NR2F1', 'NRP2', 'NUDT21', 'NUMBL', 'NUMB', 'NUP98', 'NUTF2', 'OTUB1', 'OVOL1', 'OVOL2', 'PARD3', 'PARD6A', 'PAX2', 'PAX5', 'PAX6', 'PAX8', 'PCSK9', 'PDCD4', 'PDGFRB', 'PDPN', 'PEBP1', 'PECAM1', 'PGR', 'PHLPP1', 'PI3', 'PIK3CA', 'PIK3R1', 'PIP5K1A', 'PIP5K1C', 'PIP', 'PIR', 'PITX1', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAUR', 'PLAU', 'PLCD1', 'PLEKHA7', 'PLG', 'PODXL', 'POLR2C', 'POSTN', 'POTEF', 'POU5F1', 'PPARA', 'PPARGC1A', 'PPARG', 'PPL', 'PPP6C', 'PRAME', 'PRDM10', 'PRKAR1A', 'PRKCA', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRKG1', 'PRMT5', 'PROC', 'PROM1', 'PRSS8', 'PSEN1', 'PTCH1', 'PTEN', 'PTF1A', 'PTGS2', 'PTK2', 'PTPN11', 'PTPN14', 'PTPRC', 'PTPRF', 'PTPRJ', 'PTPRM', 'PTPRS', 'PTPRT', 'PTPRU', 'PTRH2', 'PVRL1', 'PVRL2', 'PVR', 'PXN', 'RAB11A', 'RAB25', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RACGAP1', 'RAF1', 'RALA', 'RALBP1', 'RALGDS', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RARB', 'RASSF1', 'RB1', 'RBM4', 'RCOR1', 'RDX', 'REM1', 'RET', 'RHOA', 'RHOB', 'RHOC', 'RHOD', 'RICTOR', 'RND3', 'ROCK1', 'ROCK2', 'RPS6KB1', 'RPTOR', 'RRM2', 'RUNX2', 'RUNX3', 'S100A14', 'S100A4', 'S100A8', 'SATB1', 'SCRIB', 'SDC1', 'SDC4', 'SDHC', 'SELE', 'SELL', 'SELP', 'SEMA3C', 'SEMA3F', 'SENP1', 'SERPINB4', 'SERPINB5', 'SERPINE1', 'SFN', 'SFRP1', 'SFRP2', 'SFTPC', 'SHH', 'SIK1', 'SIN3A', 'SIRT1', 'SIRT2', 'SIRT4', 'SIRT7', 'SIX1', 'SIX2', 'SKIL', 'SKP2', 'SLC2A1', 'SLC39A6', 'SLC6A3', 'SLC9A3R1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SNAI1', 'SNAI2', 'SNAI3', 'SNX16', 'SNX1', 'SOX10', 'SOX17', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPARC', 'SPDEF', 'SPINT1', 'SPP1', 'SPRY1', 'SRCIN1', 'SRC', 'SRXN1', 'ST14', 'ST7L', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STX4', 'STYK1', 'SUCLG2', 'SUMO1', 'SUZ12', 'SYNJ2', 'SYP', 'TACC3', 'TACSTD2', 'TATDN1', 'TBX1', 'TBX3', 'TCF15', 'TCF4', 'TDGF1', 'TERT', 'TET2', 'TFF1', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBI', 'TGFBR1', 'TGFBR2', 'THBS1', 'THEM4', 'THUMPD1', 'THY1', 'TIAM1', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLN1', 'TLR4', 'TMPRSS2', 'TMPRSS4', 'TNFRSF6B', 'TNF', 'TNK2', 'TNS1', 'TP53BP1', 'TP53BP2', 'TP53', 'TRIM21', 'TRIM29', 'TRIM44', 'TRIP10', 'TRPS1', 'TSPYL2', 'TWIST1', 'TWIST2', 'TYRP1', 'T', 'UBE2I', 'UBE2S', 'USP48', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VEZT', 'VHL', 'VIM', 'VIPAS39', 'VPS33B', 'VTN', 'WASL', 'WDFY2', 'WDTC1', 'WIF1', 'WISP1', 'WISP3', 'WNT10A', 'WNT10B', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT9A', 'WNT9B', 'WT1', 'XIAP', 'YAP1', 'YBX1', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.1469367814660377e-13 NRMSE: 1.8262742929620674e-14 MAPE: 6.917156861901551e-11 Pearson Correlation: 0.18966060498892773 Spearman Correlation: 0.17801468846244967 Coefficient of Determination: -14.82427795964325 RMSE: 3.7454212434003264 NRMSE: 0.7363309958322507 MAPE: 1669.1909543169131 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 1.0222578555171815, tolerance: 0.07424076431120771 positive)
Pearson Correlation: 0.9999876290961838 Spearman Correlation: 0.9999589263660325 Coefficient of Determination: 0.9999737226603734 RMSE: 0.006021723033220827 NRMSE: 0.0009588425580747151 MAPE: 3.965593155732092 Pearson Correlation: 0.26174596963816127 Spearman Correlation: 0.28838514195937603 Coefficient of Determination: -16.054383010969595 RMSE: 3.8882727713277947 NRMSE: 0.764414888398497 MAPE: 1169.9263375636822 Predictor: RandomForests Pearson Correlation: 0.7633671154176777 Spearman Correlation: 0.723551063217177 Coefficient of Determination: 0.5780737897783512 RMSE: 0.7630418037263422 NRMSE: 0.12149960251685331 MAPE: 220.65995332046512 Pearson Correlation: 0.7452569666029282 Spearman Correlation: 0.525151186423771 Coefficient of Determination: 0.5414466304273828 RMSE: 0.6375784983506092 NRMSE: 0.12534472896445745 MAPE: 148.159970259313 Protein: CDH2 Protein Interaction Partners Count: 472 x_train_column_count: 467 x_train columns: ['ABCG2', 'ABL1', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTR3', 'ADAM10', 'ADH1A', 'AFP', 'AHSG', 'AKT1', 'AKT3', 'ALB', 'ALCAM', 'ALDH1A1', 'AMBN', 'AMELX', 'AMOTL1', 'AMTN', 'ANGPT1', 'ANO8', 'ANXA5', 'APC2', 'APC', 'APLP2', 'APOA1', 'APOA2', 'APOA5', 'APOB', 'APOE', 'APOL1', 'APPL1', 'APP', 'ARHGAP32', 'ARMC7', 'ARPC5', 'ARVCF', 'AR', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BCL2L1', 'BDNF', 'BMI1', 'BMP15', 'BMP2', 'BMP4', 'BMP7', 'BNIP2', 'BOC', 'BPIFB2', 'RGCC', 'GSKIP', 'C3', 'C4A', 'CABLES1', 'CADM1', 'CALU', 'CASP3', 'CAV1', 'CBLL1', 'CCNA2', 'CCNB1', 'CCND1', 'CD24', 'CD34', 'CD44', 'CD80', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK4', 'CDK5', 'CDK6', 'CDKN2A', 'CDON', 'CDX2', 'CEBPZ', 'CFL1', 'CHGB', 'CHL1', 'CHRDL1', 'CKAP4', 'CLDN11', 'CLDN3', 'CLDN4', 'CLDN7', 'CORT', 'CP', 'CREBBP', 'CRP', 'CSF1', 'CSK', 'CST3', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTTN', 'CXCL12', 'CXCR4', 'CYLD', 'CYR61', 'DBN1', 'DDR1', 'DDR2', 'DKK1', 'DLG4', 'DLG5', 'DMP1', 'DNAJC3', 'DSP', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EFNB2', 'EFNB3', 'EGFR', 'EGF', 'EHMT2', 'EIF2AK3', 'ENAM', 'ENG', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA4', 'EPHB2', 'EPS8', 'ERBB2', 'ERBB4', 'ESR1', 'ESRP1', 'EXOC4', 'EZH2', 'EZR', 'F11R', 'F5', 'EVA1A', 'FAM20A', 'FAM20C', 'FBN1', 'FER', 'FGA', 'FGF13', 'FGF23', 'FGF2', 'FGFR1', 'FGFR4', 'FGG', 'FN1', 'FOXC2', 'FOXD3', 'FOXO1', 'FOXP4', 'FSTL1', 'FSTL3', 'FUCA2', 'GAA', 'GAPDH', 'GAS6', 'GATA4', 'GFAP', 'GJA10', 'GJA1', 'GJA3', 'GJB6', 'GJC1', 'GJC3', 'GJD3', 'GJD4', 'GLI1', 'GOLM1', 'GPC3', 'GRIA1', 'GRIA2', 'HGF', 'HMGA2', 'HNF4A', 'HRAS', 'HRC', 'HSP90B1', 'HSPA5', 'IARS2', 'IGF1R', 'IGF1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL1B', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'INVS', 'IQGAP1', 'ISL1', 'ITGA6', 'ITGB1', 'ITIH2', 'ITPKB', 'JAG1', 'JAM3', 'JUN', 'JUP', 'KCNA5', 'KDR', 'KIAA2022', 'KIF5B', 'KIT', 'KLF4', 'KNG1', 'KRAS', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT8', 'KTN1', 'L1CAM', 'LAMB1', 'LAMB2', 'LAMC1', 'LEF1', 'LGALS1', 'LRP5', 'LRP6', 'LRRC7', 'LTBP1', 'LTBP3', 'MAP1B', 'MAP2K6', 'MAP2K7', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MATN3', 'MBTPS1', 'MCAM', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEPE', 'MET', 'MFGE8', 'MFI2', 'MGAT4A', 'MIA3', 'MKI67', 'MLLT4', 'MMP14', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MPDZ', 'MPP5', 'MRAP', 'MRPL49', 'MSLN', 'MSN', 'MTHFD1', 'MUC1', 'MUC4', 'MXRA8', 'MYC', 'MYO10', 'MZF1', 'NANOG', 'NCAM1', 'NCSTN', 'NDRG1', 'NENF', 'NES', 'NFASC', 'NGF', 'NKX2-5', 'NLGN1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTUM', 'NRCAM', 'NT5C', 'NT5E', 'NTRK2', 'NUCB1', 'NUMBL', 'NUMB', 'OLFM3', 'P4HB', 'PARD3', 'PAX6', 'PCSK9', 'PC', 'PDGFRB', 'PDIA4', 'PDIA6', 'PECAM1', 'PENK', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PITX2', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PNPLA2', 'POU5F1', 'PPT2', 'PRKCDBP', 'PRKCSH', 'PROC', 'PROM1', 'PRPH', 'PRSS23', 'PSEN1', 'PTEN', 'PTK2', 'PTPN11', 'PTPN1', 'PTPN2', 'PTPRC', 'PTPRS', 'PVRL1', 'PVRL2', 'PVRL3', 'PXN', 'QSOX1', 'RAB11FIP1', 'RAB3D', 'RAB5A', 'RAC1', 'RCN1', 'RELN', 'REM1', 'RHOA', 'RHOB', 'RHOC', 'ROBO1', 'PTBP3', 'RPS6KB1', 'RUNX2', 'S100A14', 'S100A4', 'SARS2', 'SCARB2', 'SCG2', 'SCG3', 'SDC2', 'SEMA3A', 'SENP3', 'SERPINA10', 'SERPINA1', 'SERPINC1', 'SERPIND1', 'SERPINE1', 'SHH', 'SHISA5', 'SIRT7', 'SKP1', 'SLC2A1', 'SLC9A3R1', 'SLIT1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SNAI1', 'SNAI2', 'SNAI3', 'SOX10', 'SOX18', 'SOX1', 'SOX2', 'SOX4', 'SOX9', 'SP7', 'SPAG9', 'SPARCL1', 'SPARC', 'SPP1', 'SPP2', 'SRC', 'ST6GALNAC5', 'STAT3', 'STC2', 'SYP', 'TBX1', 'TCF3', 'TEK', 'TF', 'TGFB1', 'TGFBR1', 'TGM2', 'TGOLN2', 'THY1', 'TIMP1', 'TJP1', 'TJP3', 'TMEM132A', 'TNC', 'TNF', 'TNNT1', 'TP53', 'TRPS1', 'TSC2', 'TWIST1', 'TWIST2', 'USP9X', 'VANGL2', 'VCAM1', 'VCAN', 'VCL', 'VEGFA', 'VGF', 'VIM', 'VTN', 'VWA1', 'WFS1', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7A', 'XIRP1', 'ZBTB16', 'ZEB1', 'ZEB2', 'ZSCAN1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.9320716417306634 Spearman Correlation: 0.9042049538965786 Coefficient of Determination: 0.8687575453184943 RMSE: 0.13811260505970965 NRMSE: 0.05004442534231091 MAPE: 1280.7725154779953 Pearson Correlation: -0.01277844413261702 Spearman Correlation: -0.045369643013005154 Coefficient of Determination: -17.33958180894783 RMSE: 1.4216889631313077 NRMSE: 0.7490931793007503 MAPE: 26039.657828033593 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 7.384951942827504, tolerance: 0.007819420435861616 positive)
Pearson Correlation: 0.9146307028381769 Spearman Correlation: 0.8856072663807906 Coefficient of Determination: 0.8363397031176711 RMSE: 0.15422962832229212 NRMSE: 0.05588434970733101 MAPE: 869.3866324594071 Pearson Correlation: 0.0967963838705452 Spearman Correlation: 0.11130063965884862 Coefficient of Determination: -6.586608569115277 RMSE: 0.9143947340936411 NRMSE: 0.4817979714700831 MAPE: 15942.199012512821 Predictor: RandomForests Pearson Correlation: 0.5579621011437972 Spearman Correlation: 0.5029575426329222 Coefficient of Determination: 0.20818808047373372 RMSE: 0.3392400841050704 NRMSE: 0.12292198134106472 MAPE: 367.54582968003314 Pearson Correlation: 0.045047914510734866 Spearman Correlation: 0.027703587326525274 Coefficient of Determination: -0.019269445275922337 RMSE: 0.33516169684487046 NRMSE: 0.17659793919787894 MAPE: 1881.682439110728 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.5727097811799439 Spearman Correlation: 0.5792644266997269 Coefficient of Determination: 0.32799649345917925 RMSE: 0.1742073915858315 NRMSE: 0.12221992450035887 MAPE: 860.7578539003619 Pearson Correlation: 0.3078638378825277 Spearman Correlation: 0.3008441501764361 Coefficient of Determination: -0.03313055115949193 RMSE: 0.1914225605909649 NRMSE: 0.1665021794001452 MAPE: 244.5250349075947 Predictor: ElasticNet Pearson Correlation: 0.57193862031258 Spearman Correlation: 0.5765218946935985 Coefficient of Determination: 0.32710405568284595 RMSE: 0.1743230291331934 NRMSE: 0.12230105316074072 MAPE: 872.8083401472041 Pearson Correlation: 0.3124088456127106 Spearman Correlation: 0.3006546216286986 Coefficient of Determination: -0.02192627631636279 RMSE: 0.190381744564837 NRMSE: 0.16559686219944594 MAPE: 245.4639300078506 Predictor: RandomForests Pearson Correlation: 0.5653902264193225 Spearman Correlation: 0.5647909017496053 Coefficient of Determination: 0.2839064224243535 RMSE: 0.17983147143600559 NRMSE: 0.1261656503872745 MAPE: 669.4133299085007 Pearson Correlation: 0.36166175579365273 Spearman Correlation: 0.3745059165326251 Coefficient of Determination: 0.12762128326974997 RMSE: 0.17590089529614486 NRMSE: 0.15300120495111194 MAPE: 201.7567420267845 Protein: PTEN Protein Interaction Partners Count: 884 x_train_column_count: 876 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ABTB1', 'ACTB', 'ACTG1', 'ADM', 'AEBP1', 'AFP', 'AKT1S1', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'AMHR2', 'ANXA2', 'ANXA5', 'APAF1', 'APC', 'ARAF', 'AREG', 'ARHGAP21', 'ARID1A', 'ARID2', 'ARL2BP', 'AR', 'ATF3', 'ATG12', 'ATG5', 'ATG7', 'ATM', 'ATRX', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'AXL', 'BAD', 'BAG5', 'BARD1', 'BAX', 'BBC3', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BIRC3', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BNIP3', 'BRAF', 'BRCA1', 'BRCA2', 'BRD4', 'BTG2', 'BTK', 'SPRTN', 'CLHC1', 'CA9', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBL', 'CBX7', 'CCL2', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD24', 'CD274', 'CD34', 'CD44', 'CD79A', 'CD79B', 'CDC14A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC7', 'CDH17', 'CDH1', 'CDH2', 'CDIPT', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CENPC', 'CFL1', 'CFLAR', 'CFTR', 'CHD1', 'CHD8', 'CHEK1', 'CHEK2', 'CHKA', 'CHORDC1', 'CHUK', 'CLTCL1', 'CLTC', 'CNOT6L', 'CREB1', 'CREBBP', 'CRP', 'CSF1R', 'CSF1', 'CSK', 'CSN2', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTGF', 'CTLA4', 'CTNNB1', 'CUL1', 'CUL3', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'DAPK1', 'DAXX', 'DBN1', 'DCAF13', 'DDIT4', 'DDR2', 'DECR1', 'DEPTOR', 'DGCR8', 'DICER1', 'DLC1', 'DLG1', 'DLG4', 'DNM1L', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOLPP1', 'DUSP1', 'DUSP6', 'DUT', 'DVL1', 'DYRK1A', 'E2F1', 'E2F2', 'E2F3', 'ECSCR', 'EGFR', 'EGF', 'EGR1', 'EIF2AK2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4EBP2', 'EIF4E', 'EIF4G1', 'EML4', 'ENDOG', 'EP300', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA3', 'EPHA4', 'EPHA5', 'EPHA7', 'EPHB1', 'EPHB2', 'EPHB3', 'EPHB4', 'ERBB2', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ESR1', 'ETS1', 'ETS2', 'ETV1', 'ETV6', 'EYA2', 'EZH2', 'EZR', 'FABP4', 'FASLG', 'FASN', 'FBXW7', 'FCGR1B', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FIG4', 'FKBP1A', 'FLCN', 'FLT1', 'FLT3', 'FLT4', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXG1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FOXP3', 'FRK', 'FYN', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GCK', 'GDF10', 'GDF2', 'GFAP', 'GJA1', 'GLI1', 'GNA11', 'GNAQ', 'GNAS', 'GNRHR', 'GRASP', 'GRB2', 'GRPR', 'GSK3A', 'GSK3B', 'GSTP1', 'H1F0', 'H2AFX', 'HAVCR2', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HES1', 'HGF', 'HIF1A', 'HIST1H2BA', 'HK1', 'HK2', 'HMGA2', 'HNF4A', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA1A', 'HSPA1B', 'HSPA2', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'ID1', 'ID4', 'IDH1', 'IDH2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL17A', 'IL21', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INPP4A', 'INPP4B', 'INPP5A', 'INPP5B', 'INPP5D', 'INPP5E', 'INPP5F', 'INPP5J', 'INPP5K', 'INPPL1', 'INSRR', 'INSR', 'INS', 'IPMK', 'IPO11', 'IQGAP1', 'IRAK1', 'IRS1', 'IRS2', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'ITPR3', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUN', 'KAT2B', 'KDM5B', 'KDM5C', 'KDM6A', 'KDR', 'KEAP1', 'ATG13', 'KIF11', 'KLLN', 'KITLG', 'KIT', 'KLF17', 'KLF2', 'KLF4', 'KLK3', 'KPNA1', 'KPNA2', 'KPNA5', 'KPNA6', 'KPNA7', 'KRAS', 'KRT14', 'KRT5', 'KRT8', 'LASP1', 'LATS1', 'LATS2', 'LCK', 'LDHA', 'LEF1', 'LEP', 'LGALS3', 'LIG4', 'LOX', 'LRIG1', 'LRP1B', 'LRRK2', 'LYN', 'LYPD1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAN2C1', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K3', 'MAP2K4', 'MAP2K7', 'MAP3K1', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK4', 'MAPK6', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAP1', 'MAPT', 'MARCH2', 'MARCH3', 'MAST1', 'MAST2', 'MAST3', 'MAST4', 'MATK', 'MCL1', 'MCM2', 'MCM7', 'MCRS1', 'MDK', 'MDM2', 'MDM4', 'MECOM', 'MECP2', 'MED12', 'MEN1', 'MET', 'MGMT', 'MINPP1', 'MITF', 'MKI67', 'MKRN1', 'MLH1', 'MLH3', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT1', 'MLST8', 'MME', 'MMP2', 'MMP9', 'MOV10', 'MRAP', 'MRE11A', 'MSH2', 'MSH6', 'MTDH', 'MTMR2', 'MTOR', 'MTSS1', 'MUTYH', 'MVP', 'MYCN', 'MYC', 'MYLK', 'MYOCD', 'NANOG', 'NCKAP1', 'NCOA3', 'NCOR2', 'NDFIP1', 'NDFIP2', 'NDRG1', 'NDRG2', 'NEDD4L', 'NEDD4', 'NES', 'NF1', 'NF2', 'NFATC1', 'NFATC4', 'NFE2L2', 'NFKBIA', 'NGFR', 'NKX3-1', 'NLGN3', 'NLGN4X', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR1H4', 'NR3C2', 'NRAS', 'NRP2', 'NTRK1', 'NTRK2', 'NUMB', 'OCRL', 'OLIG2', 'OTUD3', 'PALB2', 'PARD3', 'PARD6A', 'PARD6B', 'PARD6G', 'PARK2', 'PARK7', 'PARP1', 'PAX8', 'PBK', 'PBRM1', 'PCGF2', 'PCSK9', 'PDCD1', 'PDCD4', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PDK1', 'PDK2', 'PDPK1', 'PDZK1', 'PECAM1', 'PGM3', 'PGR', 'PHF6', 'PHLPP1', 'PHLPP2', 'PI3', 'PI4K2A', 'PI4K2B', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIK3R5', 'PIKFYVE', 'PINK1', 'PIP4K2A', 'PIP4K2B', 'PIP4K2C', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PIP5KL1', 'PKM', 'PLCB1', 'PLCB2', 'PLCB3', 'PLCB4', 'PLCD1', 'PLCD3', 'PLCD4', 'PLCE1', 'PLCG1', 'PLCG2', 'PLCH1', 'PLCH2', 'PLCZ1', 'PLEKHA1', 'PLEK', 'PLK1', 'PLK2', 'PLK3', 'BPIFA1', 'PMAIP1', 'PML', 'PMPCA', 'PMS1', 'PMS2', 'POLE', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPM1D', 'PPP2R1A', 'PPP2R4', 'PPP2R5A', 'PPP2R5E', 'PPP3CA', 'PPP6C', 'PRDX1', 'PREX2', 'PRKAA1', 'PRKAA2', 'PRKCI', 'PRKCZ', 'PRKDC', 'PRMT5', 'PROM1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTER', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPMT1', 'PTPN11', 'PTPN12', 'PTPN13', 'PTPN1', 'PTPRC', 'PTPRD', 'PTS', 'PXN', 'RAB7A', 'RAC1', 'RAC2', 'RAD51C', 'RAD51D', 'RAD51', 'RAD52', 'RAF1', 'RASA1', 'RASSF1', 'RB1CC1', 'RB1', 'RBL1', 'RBL2', 'RBM38', 'RBFOX2', 'RCN1', 'RECK', 'RELA', 'REL', 'REM1', 'RETN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'DROSHA', 'RNF146', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KB1', 'RPS6KB2', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'RRM1', 'RSL1D1', 'RUNX3', 'RWDD3', 'SACM1L', 'SALL4', 'SCAI', 'SCGB1D4', 'SCRIB', 'SDHB', 'SDHC', 'SERPINA1', 'SERPINA4', 'SERPINB5', 'SESN1', 'SESN2', 'SETD2', 'SGK1', 'SGK2', 'SGK3', 'SHANK2', 'SHARPIN', 'SHC1', 'SHFM1', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT5', 'SIRT6', 'SIRT7', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC2A4', 'SLC34A2', 'SLC9A3R1', 'SLC9A3R2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNCA', 'SNX27', 'SOCS1', 'SOCS3', 'SOD2', 'SOS1', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPOP', 'SPRY1', 'SPRY2', 'SRBD1', 'SRC', 'SREBF1', 'SRF', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STMN1', 'STUB1', 'STX16', 'SUCLG2', 'SUMO1', 'SYK', 'SYNJ1', 'SYNJ2', 'TACSTD2', 'TBX1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TEP1', 'TERT', 'TET1', 'TGFB1', 'TGFBR1', 'TGFBR2', 'TGM2', 'THBS1', 'TIMP1', 'TIMP3', 'TJP1', 'TLR4', 'TMEM55A', 'TMEM55B', 'TMPRSS2', 'TNFRSF10B', 'TNFSF10', 'TNF', 'TNKS2', 'TNKS', 'TNPO2', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TPM1', 'TRAF6', 'TRIM27', 'TRIM29', 'TSC1', 'TSC2', 'TTN', 'TUT1', 'TWIST1', 'TWSG1', 'TXN', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2E1', 'UBE2I', 'UBE2L3', 'UBE3A', 'ULK1', 'ULK2', 'USP10', 'USP13', 'USP18', 'USP28', 'USP7', 'USP8', 'UTF1', 'UVRAG', 'VCL', 'VDR', 'VEGFA', 'VHL', 'WDR18', 'WDTC1', 'WEE1', 'WIPI1', 'WIPI2', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT9A', 'WNT9B', 'WT1', 'WWP1', 'WWP2', 'XIAP', 'XPO1', 'XPO5', 'YAP1', 'YES1', 'YWHAB', 'YWHAZ', 'YY1', 'ZEB1', 'ZEB2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.5125258080267916e-14 NRMSE: 2.3649844547365986e-15 MAPE: 1.3205598544731143e-11 Pearson Correlation: -0.03829265880214012 Spearman Correlation: 0.09838277285252933 Coefficient of Determination: -13.375435251742722 RMSE: 1.7856365238208265 NRMSE: 0.42692022278506825 MAPE: 688.4797368331703 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.506928302164541, tolerance: 0.02130541006350738 positive)
Pearson Correlation: 0.9999805327333452 Spearman Correlation: 0.9999466736309465 Coefficient of Determination: 0.9999565796550138 RMSE: 0.004146679271206084 NRMSE: 0.0006483745244634639 MAPE: 4.735778377654842 Pearson Correlation: -0.046265586482608645 Spearman Correlation: 0.10609857978279032 Coefficient of Determination: -6.017577696066359 RMSE: 1.2476023206192204 NRMSE: 0.29828391924143366 MAPE: 443.29445126638973 Predictor: RandomForests Pearson Correlation: 0.616328020472098 Spearman Correlation: 0.5349771004536952 Coefficient of Determination: 0.3047122631985977 RMSE: 0.5247302430469055 NRMSE: 0.08204678962503409 MAPE: 280.01313012289415 Pearson Correlation: 0.3753084805599388 Spearman Correlation: 0.37778276537113936 Coefficient of Determination: 0.1298675749156296 RMSE: 0.43931419412355455 NRMSE: 0.10503375750096938 MAPE: 106.72854284999677 Protein: BRCA2 Protein Interaction Partners Count: 361 x_train_column_count: 351 x_train columns: ['ABL1', 'ACHE', 'ADRB1', 'ADRB2', 'AKT1', 'ALK', 'APEX1', 'ARID1A', 'ARPC1A', 'AR', 'ATAD5', 'ATM', 'ATRIP', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'B3GALTL', 'BACH1', 'BARD1', 'BCCIP', 'BCHE', 'BDNF', 'BECN1', 'BIRC5', 'BLM', 'BMI1', 'BRCA1', 'BRCC3', 'BRE', 'BRIP1', 'SLX4', 'BUB1B', 'BUB1', 'BUB3', 'SFR1', 'RHNO1', 'RMI2', 'BABAM1', 'MMS22L', 'CASC1', 'CASC5', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCNE1', 'CDC25A', 'CDC25C', 'CDC45', 'CDC6', 'CDH1', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CENPE', 'CENPF', 'CEP55', 'CHEK1', 'CHEK2', 'CHRNA1', 'CLSPN', 'CNTROB', 'CREM', 'CSMD3', 'CTNNB1', 'CYP19A1', 'DMC1', 'DNA2', 'DSN1', 'DYNC1LI2', 'EGFR', 'EGF', 'ELAC2', 'EME1', 'EME2', 'ENAM', 'EPCAM', 'ERBB2', 'ERBB3', 'ERCC1', 'ERCC2', 'ERCC4', 'ERCC5', 'ERCC6', 'ERCC8', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM175A', 'FANCA', 'FANCB', 'FANCC', 'FANCD2', 'FANCE', 'FANCF', 'FANCG', 'FANCI', 'FANCL', 'FANCM', 'FBN1', 'FBXO18', 'FBXW7', 'FEN1', 'FGFR2', 'FHIT', 'FLNA', 'FOXM1', 'GAPDH', 'GEN1', 'SLX1B', 'H2AFX', 'HELQ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HMG20A', 'HMG20B', 'HMMR', 'HNRNPC', 'HOXB13', 'HRAS', 'HUS1', 'ITPKB', 'KAT2B', 'KAT5', 'KEAP1', 'SPIDR', 'KIF23', 'KIF4A', 'KIT', 'KLK3', 'KRAS', 'KRT5', 'LIG1', 'LIG3', 'LIG4', 'LIMD1', 'LSP1', 'MAD2L2', 'MAGED1', 'MAMSTR', 'MAP2K2', 'MAP3K1', 'MCM10', 'MCPH1', 'MDC1', 'MDM2', 'MDM4', 'MEN1', 'MGMT', 'MKI67', 'MLH1', 'MLH3', 'KMT2C', 'MND1', 'MORF4L1', 'MRE11A', 'MRPL36', 'MSH2', 'MSH3', 'MSH4', 'MSH5', 'MSH6', 'MTA2', 'FAN1', 'MUC1', 'MUS81', 'MUTYH', 'MYC', 'NBN', 'NCAPG', 'NEDD4', 'NF1', 'NHEJ1', 'NNT', 'NOTCH1', 'NSL1', 'NSMCE4A', 'OBFC1', 'OGG1', 'PALB2', 'PARG', 'PARP1', 'PARP2', 'PARP3', 'PAXIP1', 'PCNA', 'PDLIM7', 'PDS5A', 'PDS5B', 'PGR', 'PIK3CA', 'PLCB4', 'PLEC', 'PLEKHH1', 'PLK1', 'PMS1', 'PMS2', 'PNOC', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'POLN', 'POLQ', 'PRDM9', 'PRKDC', 'PRSS1', 'PSMC3IP', 'PSMD3', 'PSMD6', 'PTEN', 'RAD17', 'RAD18', 'RAD1', 'RAD21', 'RAD23B', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD52', 'RAD54B', 'RAD54L', 'RAD9A', 'RAD9B', 'RAG2', 'RASSF1', 'RBBP8', 'RBMX', 'RECQL4', 'RECQL5', 'RECQL', 'RET', 'REV1', 'REV3L', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RNF168', 'RNF8', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SKP2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCAL1', 'SMARCB1', 'SMC1A', 'SMC2', 'SMC3', 'SMC4', 'SMC5', 'SMC6', 'SMUG1', 'SNAI2', 'SP1', 'SPO11', 'STAT5A', 'STK11', 'STRA13', 'SUV39H1', 'SYCP3', 'TBCE', 'TDP1', 'TERT', 'TEX15', 'TMPRSS2', 'TNS1', 'TOP1', 'TOP2A', 'TOP3A', 'TOP3B', 'TOPBP1', 'TOX3', 'TP53BP1', 'TP53', 'TPX2', 'TRIP12', 'PRSS58', 'TTK', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2D1', 'UBE2E2', 'UBE2E3', 'UBE2N', 'UBE2T', 'UIMC1', 'USF1', 'USP11', 'USP15', 'USP1', 'USP21', 'USP4', 'UVRAG', 'VEGFA', 'VWF', 'WDR48', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WTIP', 'XPA', 'XPO1', 'XRCC1', 'XRCC2', 'XRCC3', 'XRCC4', 'XRCC5', 'XRCC6', 'ZFYVE26', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.8370864232511477 Spearman Correlation: 0.8194457309388669 Coefficient of Determination: 0.7007136799913994 RMSE: 0.1039708626205804 NRMSE: 0.07007444977528132 MAPE: 335.0665956607377 Pearson Correlation: 0.01707565923020572 Spearman Correlation: -0.040845895834112654 Coefficient of Determination: -1.9457209116501466 RMSE: 0.3675159521062796 NRMSE: 0.25278112656822704 MAPE: 959.7491478061906 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 3.119130988837304, tolerance: 0.0019432053784754488 positive)
Pearson Correlation: 0.8308926977365502 Spearman Correlation: 0.8125810395159205 Coefficient of Determination: 0.6903036975539585 RMSE: 0.10576359980986734 NRMSE: 0.07128272167920319 MAPE: 317.4104332820546 Pearson Correlation: 0.032938541281577596 Spearman Correlation: -0.01685058417187247 Coefficient of Determination: -1.453314680353285 RMSE: 0.33539534013158273 NRMSE: 0.23068825023322448 MAPE: 910.8610828958294 Predictor: RandomForests Pearson Correlation: 0.5952029688956896 Spearman Correlation: 0.5418972659754484 Coefficient of Determination: 0.22467742167893257 RMSE: 0.16734372414890591 NRMSE: 0.1127865932580985 MAPE: 173.18457571961864 Pearson Correlation: 0.13445482322785277 Spearman Correlation: 0.17930148754972008 Coefficient of Determination: 0.016841652050054723 RMSE: 0.21232059918593638 NRMSE: 0.14603621951174875 MAPE: 163.7509145227982 Protein: CDKN2A Protein Interaction Partners Count: 612 x_train_column_count: 605 x_train columns: ['ABCC1', 'ABL1', 'ACAP1', 'ACAP2', 'ACP5', 'ACTA1', 'ACTB', 'ACTG1', 'ADAMTS9', 'ADAP1', 'AFP', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD12', 'ANXA5', 'AP3D1', 'AP3S1', 'AP3S2', 'APAF1', 'APBA1', 'APBA2', 'ARAP1', 'ARAP2', 'ARF1', 'ARF3', 'ARF4', 'ARF5', 'ARF6', 'ARFGAP1', 'ARFGAP3', 'ARFIP2', 'ARFRP1', 'ARID1A', 'ARID2', 'ARID5B', 'ARL10', 'ARL1', 'ARL2', 'ARL3', 'ARL4A', 'ARL5A', 'AR', 'ASAP1', 'ATM', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'AXIN1', 'BAP1', 'BCL2L11', 'BCL2L1', 'BCL6', 'BECN1', 'BIRC5', 'BMI1', 'BRAF', 'BRCA1', 'BRCA2', 'BUB1B', 'RGCC', 'C1QBP', 'RABL6', 'CACNA1G', 'CADM1', 'CAMK1D', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNL1', 'CD274', 'CD34', 'CD44', 'CDC123', 'CDC20', 'CDC25A', 'CDC25C', 'CDC42', 'CDC45', 'CDC5L', 'CDC6', 'CDC7', 'CDH13', 'CDH17', 'CDH1', 'CDH2', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5RAP3', 'CDK6', 'CDK7', 'CDKAL1', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDX2', 'CEACAM5', 'CEBPB', 'CEBPE', 'CHEK1', 'CHEK2', 'CHFR', 'CHKA', 'COMMD1', 'CRABP1', 'CREBBP', 'CSF1R', 'CSF1', 'CSF2', 'CTBP1', 'CTBP2', 'CTCF', 'CTLA4', 'CTNNB1', 'CTSK', 'CUL1', 'CUL3', 'CXCR4', 'CYCS', 'CYLD', 'CYTH1', 'CYTH2', 'CYTH3', 'DAB2IP', 'DAP', 'DAXX', 'DICER1', 'DIRAS3', 'DLEC1', 'DMTF1', 'DNAH3', 'DNMT1', 'DNMT3A', 'DNMT3B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EBF1', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EP300', 'EPCAM', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ETS1', 'ETV6', 'EWSR1', 'EZH1', 'EZH2', 'FAT1', 'FBXW7', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FKBP2', 'FLT3', 'FMN2', 'FN1', 'FOS', 'FOXA1', 'FOXM1', 'FOXN2', 'FOXO1', 'FOXO3', 'FTO', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GATA4', 'GATA5', 'GBF1', 'GDF15', 'GGA1', 'GGA2', 'GGA3', 'GIT1', 'GIT2', 'GLI1', 'GLTSCR2', 'GMNN', 'GNA11', 'GNAQ', 'GNAS', 'GNL3', 'GOLPH3', 'GP5', 'GSPT1', 'GSTP1', 'H2AFX', 'H2AFZ', 'H3F3A', 'H3F3B', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC9', 'HELLS', 'HGF', 'HHEX', 'HIC1', 'HIF1A', 'HIST1H2BA', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AA3', 'HIST2H2AC', 'HIST2H4A', 'HIST4H4', 'HLTF', 'HMGA2', 'HNF4A', 'HNRNPD', 'HOPX', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA4', 'HSPA9', 'HUWE1', 'ID1', 'IDH1', 'IDH2', 'IGF1R', 'IGF1', 'IGF2BP2', 'IGF2R', 'IGF2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING4', 'INS', 'IQSEC1', 'IRS1', 'ISOC2', 'ITGAM', 'JAK1', 'JAK2', 'JAK3', 'JAZF1', 'JUNB', 'JUN', 'KAT2B', 'KAT5', 'KCNJ11', 'KCNQ1', 'KDM1A', 'KDM2B', 'KDM6A', 'KDM6B', 'KDR', 'KEAP1', 'KIAA1549', 'KIT', 'KLF4', 'KRAS', 'KRT19', 'KRT20', 'KRT5', 'KRT7', 'LATS2', 'LOX', 'LRRK2', 'MACROD2', 'MAF', 'MAP2K1', 'MAP2K4', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MAX', 'MC1R', 'MCL1', 'MCM10', 'MCM2', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEN1', 'MEOX1', 'MEOX2', 'MET', 'MGMT', 'MITF', 'MKRN1', 'MLANA', 'MLH1', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT3', 'MME', 'MMP2', 'MMP7', 'MMP9', 'MOV10', 'MRAS', 'MSH2', 'MSH6', 'MTA1', 'MTAP', 'MTHFR', 'MTNR1B', 'MTOR', 'MUC1', 'MYBL2', 'MYCL', 'MYCN', 'MYC', 'MYOD1', 'KAT6A', 'NANOG', 'NCAM1', 'NCL', 'NCOR1', 'NES', 'NEUROG1', 'NF1', 'NF2', 'NFATC1', 'NFE2L2', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NPM1', 'NRAS', 'NSUN2', 'ORC4', 'ORC5', 'OSBP2', 'P2RY8', 'PA2G4', 'PALB2', 'PARP1', 'PAX3', 'PAX5', 'PAX8', 'PBRM1', 'PCGF2', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PEX19', 'PGR', 'PHLDB1', 'PI3', 'PIAS2', 'PIGF', 'PIK3CA', 'PIK3R1', 'PIP4K2A', 'PLEKHA3', 'PLEKHA8', 'PLEK', 'PLK1', 'PMAIP1', 'PML', 'PMS2', 'POTEF', 'POU5F1', 'PPARA', 'PPARG', 'PPM1D', 'PPP1R9B', 'PPP3CA', 'PRDM2', 'PRMT6', 'PROM1', 'PRSS1', 'PSMC3', 'PSMD10', 'PSME3', 'PTCH1', 'PTEN', 'PTER', 'PTF1A', 'PTGS2', 'PTPN11', 'PTPRC', 'PTPRD', 'PXN', 'RAB11A', 'RAB5A', 'RABEP1', 'RABGEF1', 'RAC2', 'RAD51', 'RAF1', 'RAP2B', 'RARB', 'RASSF1', 'RASSF2', 'RB1', 'RBL1', 'RBL2', 'RCC1', 'RELA', 'RELB', 'REL', 'RET', 'RHOA', 'DROSHA', 'RNF2', 'RNF43', 'ROS1', 'RPL11', 'RPRM', 'RPS27A', 'RPS6KB1', 'RRAS2', 'RRAS', 'RTEL1', 'RUNX2', 'RUNX3', 'SDHC', 'SENP1', 'SENP3', 'SERPINE1', 'SERTAD1', 'SETD2', 'SFN', 'SFRP1', 'SFRP2', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SIX2', 'SKP2', 'SLC30A8', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SNAI1', 'SNAI2', 'SNCA', 'SOCS1', 'SOX2', 'SP1', 'SPEN', 'SRC', 'STAT1', 'STAT3', 'STK11', 'STK25', 'STK33', 'STMN1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUV39H1', 'SUZ12', 'SYNE1', 'SYP', 'TBL1XR1', 'TBRG1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TERT', 'TET2', 'TFDP1', 'TFPI2', 'TGFBR2', 'THADA', 'THBS1', 'TIMP3', 'TMCO1', 'TMEM115', 'TNFRSF10B', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TRADD', 'TRIM28', 'TRIP12', 'PRSS58', 'TSC2', 'TSPAN8', 'TTF1', 'TWIST1', 'TWSG1', 'TYR', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2I', 'UBE3A', 'UCHL1', 'USP7', 'UTF1', 'VEGFA', 'VHL', 'WDTC1', 'WEE1', 'WFS1', 'WHSC1', 'WIF1', 'WRN', 'WT1', 'WWOX', 'XRCC1', 'YY1', 'ZBTB17', 'ZBTB7A', 'ZEB1', 'ZFP91', 'ZNF148', 'ZNF217', 'ZNF227', 'ZNF410', 'ZNF420', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 8.229764395112905e-14 NRMSE: 1.9214055834686463e-14 MAPE: 6.898364359509833e-11 Pearson Correlation: 0.2514258969140733 Spearman Correlation: 0.2367785134477986 Coefficient of Determination: -16.26650863278029 RMSE: 2.728124957704482 NRMSE: 0.8422478335662629 MAPE: 1139.789187290888 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 1.8040296482711784, tolerance: 0.02397725168374273 positive)
Pearson Correlation: 0.9971656284685858 Spearman Correlation: 0.9959494884454108 Coefficient of Determination: 0.9943071233289962 RMSE: 0.0503702899585158 NRMSE: 0.011759966837531706 MAPE: 78.15424021460683 Pearson Correlation: 0.3154252857083295 Spearman Correlation: 0.24511278195488723 Coefficient of Determination: -4.5154241543522025 RMSE: 1.5418831129333388 NRMSE: 0.4760220780257907 MAPE: 752.7080189530662 Predictor: RandomForests Pearson Correlation: 0.6768243977972589 Spearman Correlation: 0.62893616829792 Coefficient of Determination: 0.4463543207772377 RMSE: 0.49673472448774103 NRMSE: 0.11597280642691003 MAPE: 163.63957323645567 Pearson Correlation: 0.6157401758886617 Spearman Correlation: 0.5990972456015662 Coefficient of Determination: 0.3702552962414162 RMSE: 0.5210078363349826 NRMSE: 0.16084956819331994 MAPE: 105.49758831538445 Protein: TP53 Protein Interaction Partners Count: 1000 x_train_column_count: 991 x_train columns: ['ABCB1', 'ABCC1', 'ABL1', 'ACTB', 'ACTL6A', 'ADAM17', 'AFP', 'AGT', 'AICDA', 'AIFM2', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD2', 'ANXA1', 'ANXA2', 'ANXA5', 'APAF1', 'APBB1', 'APC', 'APEX1', 'APOBEC3B', 'APP', 'ARID1A', 'ARID3A', 'AR', 'ASF1A', 'ASXL1', 'ATF2', 'ATF3', 'ATG7', 'ATM', 'ATN1', 'ATRIP', 'ATRX', 'ATR', 'ATXN3', 'AURKA', 'AURKB', 'AXIN1', 'AXL', 'BACE1', 'BAG1', 'BAG2', 'BAIAP2L1', 'BAK1', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2A1', 'BCL2L11', 'BCL2L12', 'BCL2L14', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BID', 'BIRC3', 'BIRC5', 'BIRC6', 'BLM', 'BMF', 'BMI1', 'BMX', 'BNIP3L', 'BNIP3', 'BRCA1', 'BRCA2', 'BRCC3', 'BRD1', 'BRD4', 'BRD7', 'BRE', 'BRIP1', 'BRPF1', 'BRPF3', 'BTG2', 'BTK', 'BUB1B', 'BUB1', 'RHNO1', 'RGCC', 'RMI2', 'CNOT11', 'SETD9', 'CA9', 'CABIN1', 'CABLES1', 'CAPN1', 'CARM1', 'CASP10', 'CASP1', 'CASP2', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBX2', 'CBX4', 'CBX6', 'CBX8', 'CCDC106', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNG2', 'CCNH', 'CCNK', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CD24', 'CD274', 'CD34', 'CD40LG', 'CD40', 'CD44', 'CD82', 'CDC20', 'CDC25A', 'CDC25C', 'CDH17', 'CDH1', 'CDK12', 'CDK13', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CEACAM5', 'CEBPB', 'CENPJ', 'CFL1', 'CFLAR', 'CHD3', 'CHD4', 'CHD8', 'CHEK1', 'CHEK2', 'CHUK', 'CISH', 'CITED2', 'CLSPN', 'CLU', 'CNOT10', 'CNOT1', 'CNOT2', 'CNOT3', 'CNOT4', 'CNOT6L', 'CNOT6', 'CNOT7', 'CNOT8', 'COPS5', 'CREB1', 'CREBBP', 'CRYAB', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK1G1', 'CSNK1G2', 'CSNK1G3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTCF', 'CTGF', 'CTNNB1', 'CUL4A', 'CUL7', 'CUL9', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP1A1', 'DACH1', 'DAPK1', 'DAP', 'DAXX', 'DDB1', 'DDB2', 'DDIT4', 'DDX17', 'DDX3X', 'DDX5', 'DECR1', 'DGCR8', 'DHCR24', 'DHFR', 'DIABLO', 'DICER1', 'DKK1', 'DMTF1', 'DNA2', 'DNAJA3', 'DNAJB1', 'DNMT1', 'DNMT3A', 'DNTT', 'DPYD', 'DRAM1', 'DTL', 'DUSP1', 'DUSP2', 'DYRK1A', 'DYRK2', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EEF1A1', 'EEF1A2', 'EGFR', 'EGF', 'EGR1', 'EHMT1', 'EHMT2', 'EI24', 'EIF2AK2', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4EBP1', 'ELANE', 'ELAVL1', 'ELL3', 'ELL', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHA3', 'EPHB2', 'ERBB2', 'ERBB4', 'ERCC1', 'ERCC2', 'ERCC3', 'ERCC6', 'ESR1', 'ETS1', 'ETS2', 'EWSR1', 'EXO1', 'EZH2', 'F2', 'FADD', 'AMER1', 'FAM175B', 'FANCC', 'FANCD2', 'FASLG', 'FAS', 'FBL', 'FBXO11', 'FBXO4', 'FBXW7', 'FGF1', 'FGF2', 'FGFR3', 'FHIT', 'FHL2', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FSCN1', 'FUT4', 'FZR1', 'G3BP1', 'G6PD', 'GADD45A', 'GADD45B', 'GADD45G', 'GAPDH', 'GATAD2A', 'GATAD2B', 'GDF15', 'GFI1', 'GLS2', 'GLTSCR2', 'GNL3', 'GRAMD4', 'GRB10', 'GRB14', 'GSK3B', 'GSTP1', 'GTF2H1', 'GTSE1', 'H1F0', 'H2AFX', 'HAMP', 'HCK', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC5', 'HDAC7', 'HDAC8', 'HDAC9', 'HERC5', 'HIC1', 'HIF1A', 'HIPK1', 'HIPK2', 'HIPK3', 'HIPK4', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HK2', 'HMGA1', 'HMGA2', 'HMGB1', 'HMGB2', 'HMMR', 'HMOX1', 'HNF4A', 'HNRNPK', 'HNRNPL', 'HOXA5', 'HPGDS', 'HRAS', 'HSF1', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA1A', 'HSPA1B', 'HSPA1L', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'HSPB1', 'HSPB2', 'HTT', 'HUS1', 'HUWE1', 'ICAM1', 'ID2', 'ID4', 'IDH1', 'IDH2', 'IFI16', 'IFNAR1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IGFBP7', 'IKBKB', 'IL17A', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING2', 'ING3', 'ING4', 'ING5', 'INSIG1', 'INS', 'IRF1', 'ISG15', 'ITPKB', 'JAG1', 'JAK2', 'JMY', 'JUN', 'KAT2A', 'KAT2B', 'KAT5', 'KDM1A', 'KDM6A', 'KDM6B', 'KDR', 'KHDRBS1', 'CCAR2', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KPNA2', 'KRAS', 'KRT14', 'KRT17', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'L3MBTL1', 'LAMA4', 'LEP', 'LGALS7B', 'LGALS7', 'LIF', 'LIG4', 'LIN28A', 'PIDD1', 'LRRK2', 'LYN', 'MAF1', 'MAF', 'MAGEA2', 'MAP1LC3B', 'MAP2K1', 'MAP2K3', 'MAP2K7', 'MAP3K1', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MBD3', 'MCL1', 'MCM7', 'MDC1', 'MDH1', 'MDM2', 'MDM4', 'MEAF6', 'MECOM', 'MELK', 'MET', 'MGMT', 'MIF', 'MKI67', 'MKRN1', 'MLH1', 'KMT2D', 'KMT2C', 'MMP13', 'MMP1', 'MMP2', 'MMP9', 'MOV10', 'MRE11A', 'MSH2', 'MSH6', 'MSX1', 'MT1A', 'MT2A', 'MTA1', 'MTA2', 'MTA3', 'MTOR', 'MUC1', 'MUTYH', 'MYBBP1A', 'MYB', 'MYCN', 'MYC', 'MYOCD', 'KAT8', 'KAT6A', 'NANOG', 'NBN', 'NCL', 'NCOA3', 'NCOR1', 'NCOR2', 'NDN', 'NDRG1', 'NEDD8', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFE2L2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NFKBIB', 'NFYA', 'NFYB', 'NFYC', 'NGFR', 'NKX2-1', 'NLK', 'NLRC4', 'NME1', 'NOC2L', 'NOS3', 'NOTCH1', 'NOTCH3', 'NOTCH4', 'NOX4', 'NPM1', 'NQO1', 'NR1I2', 'NR2E1', 'NR3C1', 'NR4A1', 'NR4A2', 'NRAS', 'NUAK1', 'NUMB', 'NUPR1', 'OGG1', 'OLIG2', 'OPN1SW', 'OSGIN1', 'OTUB1', 'OTUB2', 'OTUD5', 'PADI4', 'PALB2', 'PARK2', 'PARK7', 'PARP1', 'PATZ1', 'PAX2', 'PAX3', 'PAX8', 'PBK', 'PBRM1', 'PCBP4', 'PCNA', 'PDCD4', 'PDCD5', 'PDGFRA', 'PDGFRB', 'PDLIM7', 'PER2', 'PERP', 'PGR', 'PHB', 'PHC1', 'PHC2', 'PHC3', 'PHF20', 'PHGDH', 'PI3', 'PIAS1', 'PIAS2', 'PIAS4', 'PIK3CA', 'PIN1', 'PKM', 'PLAGL1', 'PLAU', 'PLK1', 'PLK2', 'PLK3', 'PLK4', 'PMAIP1', 'PML', 'PMS2', 'POLI', 'POLK', 'POU4F1', 'POU4F2', 'POU5F1', 'PPARGC1A', 'PPARG', 'PPIF', 'PPM1D', 'PPP1R13B', 'PPP1R13L', 'PPP1R15A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R4', 'PPP2R5C', 'PRDM1', 'PRDM2', 'PRDX1', 'PRELID1', 'PRIMA1', 'PRKAA1', 'PRKAA2', 'PRKAB1', 'PRKAB2', 'PRKAG1', 'PRKAG2', 'PRKAG3', 'PRKCA', 'PRKCD', 'PRKCZ', 'PRKD1', 'PRKDC', 'PRKG1', 'PRMT1', 'PRMT5', 'PROM1', 'PSEN1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTBP1', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2', 'PTTG1', 'RABGGTA', 'RABGGTB', 'RAD17', 'RAD1', 'RAD50', 'RAD51', 'RAD9A', 'RAD9B', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP4', 'RBBP6', 'RBBP7', 'RBBP8', 'RBL1', 'RBL2', 'RBM38', 'RBPJ', 'RCHY1', 'RCOR1', 'RECQL4', 'RELA', 'REM1', 'REST', 'RET', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RFFL', 'RFWD2', 'RING1', 'RMI1', 'DROSHA', 'RNF20', 'RNF2', 'RNF34', 'RNF43', 'ROCK1', 'RPA1', 'RPA2', 'RPA3', 'RPL11', 'RPL22', 'RPL26', 'RPL5', 'RPRM', 'RPS14', 'RPS19', 'RPS27A', 'RPS27L', 'RPS3', 'RPS6KB1', 'RQCD1', 'RRAD', 'RRM2B', 'RRM2', 'RUNX2', 'RUNX3', 'S100A2', 'S100A4', 'S100A6', 'S100B', 'SALL4', 'SCO2', 'SDHC', 'SENP1', 'SENP3', 'SERPINB5', 'SERPINE1', 'SESN1', 'SESN2', 'SESN3', 'SETD2', 'SETD7', 'SETD8', 'SETDB1', 'SFN', 'SRSF1', 'SGK1', 'SHFM1', 'SHH', 'SHISA5', 'SIK1', 'SIN3A', 'SIN3B', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SKP2', 'SLC2A14', 'SLC2A1', 'SLC2A2', 'SLC2A3', 'SLC6A6', 'SLMO1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMG1', 'SMG7', 'SMYD2', 'SNAI1', 'SNAI2', 'SOCS1', 'SOCS3', 'SOD2', 'SORT1', 'SOX2', 'SOX4', 'SP100', 'SP1', 'SP3', 'SP7', 'SPATA18', 'SPP1', 'SQSTM1', 'SRC', 'SREBF1', 'SREBF2', 'SSRP1', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STEAP3', 'STK11', 'STMN1', 'STUB1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUMO4', 'SUPT16H', 'SUV39H1', 'SUZ12', 'SYK', 'SYP', 'TADA3', 'TAF10', 'TAF11', 'TAF12', 'TAF13', 'TAF15', 'TAF1L', 'TAF1', 'TAF2', 'TAF3', 'TAF4B', 'TAF4', 'TAF5', 'TAF6', 'TAF7L', 'TAF7', 'TAF9B', 'TBPL1', 'TBPL2', 'TBP', 'TCHP', 'TCP1', 'TDG', 'TERT', 'TET2', 'TFAM', 'TFAP2A', 'TFAP2C', 'TFDP1', 'TFF1', 'TGFB1', 'TGM2', 'THBS1', 'TIMP3', 'TLR3', 'TLR9', 'TMEM219', 'TNFAIP3', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF10C', 'TNFRSF10D', 'TNF', 'TNK2', 'TNKS1BP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOE1', 'TOP1', 'TOP2A', 'TOP3A', 'TOPBP1', 'TOPORS', 'TP53AIP1', 'TP53BP1', 'TP53BP2', 'TP53I3', 'TP53INP1', 'TP53RK', 'TP63', 'TP73', 'TPT1', 'TPX2', 'TRAF6', 'TRIAP1', 'TRIM24', 'TRIM28', 'TRIM29', 'TRIM32', 'TRIM59', 'TRIM8', 'TRRAP', 'TSC2', 'TTC5', 'TTK', 'TWIST1', 'TWIST2', 'TXN', 'TYMS', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2D1', 'UBE2E1', 'UBE2I', 'UBE2K', 'UBE2N', 'UBE2Q1', 'UBE2S', 'UBE3A', 'UBN1', 'UCHL1', 'UHRF1', 'USF1', 'USP10', 'USP15', 'USP24', 'USP3', 'USP42', 'USP7', 'UTP14A', 'VEGFA', 'VHL', 'VPRBP', 'VRK1', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WWOX', 'XAF1', 'XIAP', 'XPA', 'XPO1', 'XRCC1', 'XRCC5', 'XRCC6', 'YBX1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'YY1', 'YY2', 'ZBTB33', 'ZBTB7A', 'ZEB1', 'ZEB2', 'ZKSCAN4', 'ZNF148', 'ZNF274', 'ZNF385A', 'ZNF420', 'ZNF668', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 7.47095655654223e-15 NRMSE: 1.7954714146941193e-15 MAPE: 2.736651500766413e-11 Pearson Correlation: 0.19384276055816865 Spearman Correlation: 0.14443322235938105 Coefficient of Determination: -4.873887337223021 RMSE: 1.0432390641495801 NRMSE: 0.3890229907817757 MAPE: 1576.6636365052807 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.24672950717038133, tolerance: 0.010899962745861313 positive)
Pearson Correlation: 0.9999770507604192 Spearman Correlation: 0.999929951344697 Coefficient of Determination: 0.9999497912071674 RMSE: 0.0031894166630238303 NRMSE: 0.0007665024424474479 MAPE: 4.0574110052111 Pearson Correlation: 0.3348584959806835 Spearman Correlation: 0.21722714747066674 Coefficient of Determination: -3.0868990619580483 RMSE: 0.8701978190827667 NRMSE: 0.3244960525201521 MAPE: 1458.8251722853565 Predictor: RandomForests Pearson Correlation: 0.6795584244288518 Spearman Correlation: 0.5702024849768648 Coefficient of Determination: 0.3851315961900421 RMSE: 0.35294940755893545 NRMSE: 0.08482321738979463 MAPE: 572.04274768233 Pearson Correlation: 0.501519972170205 Spearman Correlation: 0.44336268951354246 Coefficient of Determination: 0.23124377899961557 RMSE: 0.37741169727490764 NRMSE: 0.1407365121527498 MAPE: 398.6003610153303 Protein: CTNNB1 Protein Interaction Partners Count: 992 x_train_column_count: 984 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACAN', 'ACP1', 'ACTA1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTN4', 'ACVR1B', 'ACVR1', 'ADAM10', 'ADCY7', 'ADIPOQ', 'AES', 'AFP', 'AHI1', 'AHR', 'AHSA1', 'AJAP1', 'AK9', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'ALPL', 'AMHR2', 'AMH', 'ANXA5', 'AP1M1', 'APC2', 'APCS', 'APC', 'APH1A', 'APH1B', 'AQP1', 'ARHGAP10', 'ARHGAP21', 'ARHGAP32', 'ARHGEF4', 'ARID1A', 'ARID2', 'ARMC7', 'ARMC8', 'ARVCF', 'ARX', 'AR', 'ASCL1', 'ASF1A', 'ASH2L', 'ASIP', 'ATF4', 'ATM', 'AURKA', 'AXIN1', 'AXIN2', 'BAG3', 'BCAR1', 'BCL2L1', 'BCL3', 'BCL6', 'BCL9L', 'BCL9', 'BDNF', 'BGLAP', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BMPR1B', 'BNIP2', 'BRAF', 'BRCA1', 'BRCA2', 'BRMS1L', 'BTRC', 'HILPDA', 'AK8', 'CA2', 'CA9', 'CABLES1', 'CACYBP', 'CALM1', 'CALM3', 'CARM1', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBLL1', 'CBL', 'CBY1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CD24', 'CD34', 'CD40', 'CD44', 'CDC27', 'CDC42', 'CDC73', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH16', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH26', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDHR5', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK8', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDON', 'CDX1', 'CDX2', 'CEBPA', 'CHD8', 'CHRD', 'CHUK', 'CITED1', 'CKAP5', 'CLCA1', 'CLDN3', 'CLDN5', 'COL1A1', 'COPS3', 'COPS5', 'COPS6', 'CREB1', 'CREBBP', 'CRKL', 'CRK', 'CRP', 'CRYAB', 'CSNK1A1L', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK2A3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNAL1', 'CTNNBIP1', 'CTNND1', 'CTNND2', 'CTTN', 'CUL1', 'CUL4A', 'CUL4B', 'CXCR4', 'CXXC4', 'DAB2', 'DACT1', 'DACT2', 'DACT3', 'DCT', 'DCX', 'DDB1', 'DDX39A', 'DDX3X', 'DDX5', 'DHODH', 'DHX9', 'DKK1', 'DKK2', 'DKK3', 'DKK4', 'DLG1', 'DLG2', 'DLG4', 'DLG5', 'DLGAP1', 'DLL4', 'DLX1', 'DNM2', 'DNMT1', 'DPYD', 'DSC1', 'DSC2', 'DSC3', 'DSG1', 'DSG2', 'DSG3', 'DSG4', 'DSP', 'DUSP6', 'DVL1', 'DVL2', 'DVL3', 'E2F3', 'ECM1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'ELAVL1', 'EMD', 'ENAH', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHB2', 'EPHB3', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EXOC3', 'EXOC4', 'EYA4', 'EZH2', 'EZR', 'F2RL2', 'FAF1', 'AMER1', 'FANCA', 'FASLG', 'FAS', 'FAT1', 'FAT4', 'FBXW11', 'FBXW7', 'FERMT2', 'FER', 'FGF10', 'FGF13', 'FGF2', 'FGF3', 'FGF4', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FLT3', 'FMN1', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC2', 'FOXG1', 'FOXL1', 'FOXL2', 'FOXM1', 'FOXN3', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FRAT1', 'FRAT2', 'FRZB', 'FSCN1', 'FSTL1', 'FSTL3', 'FURIN', 'FUS', 'FXR1', 'FYN', 'FZD10', 'FZD1', 'FZD2', 'FZD3', 'FZD4', 'FZD5', 'FZD6', 'FZD7', 'FZD8', 'FZD9', 'GAPDH', 'GATA2', 'GATA4', 'GCG', 'GDF2', 'GDNF', 'GFRA1', 'GJA1', 'GLI1', 'GLI2', 'GLI3', 'GLIS2', 'GLUL', 'GNA11', 'GNA12', 'GNA13', 'GNAQ', 'GNAS', 'GPC3', 'GRIA2', 'GRIP1', 'GSK3A', 'GSK3B', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HAS2', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC7', 'HERC5', 'HES7', 'HGF', 'HGS', 'HHEX', 'HIC1', 'HIF1A', 'HINT1', 'HIPK2', 'HIST1H1C', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HMGB1', 'HNF1A', 'HNF4A', 'HNRNPA1', 'HNRNPA2B1', 'HNRNPK', 'HNRNPM', 'HOXA10', 'HOXB4', 'HPGD', 'HRAS', 'HSP90AB1', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPD1', 'HTRA1', 'HTT', 'HUWE1', 'IBSP', 'IDH1', 'IDH2', 'IFNB1', 'IFRD1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP4', 'IHH', 'IKBKB', 'IL6', 'CXCL8', 'ILK', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IRF3', 'ISG15', 'ISL1', 'ITGAE', 'ITGB1', 'ITGB7', 'ITK', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'AJUBA', 'JUN', 'JUP', 'KANK1', 'KAT2A', 'KAT2B', 'KAT5', 'KCNN1', 'KCTD1', 'KDM1A', 'KDR', 'KIF18B', 'KIF3A', 'KIF5B', 'KIFC3', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KRAS', 'KREMEN1', 'KRIT1', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LATS2', 'LDB1', 'LDHB', 'LDLR', 'LEF1', 'LEO1', 'LGR4', 'LGR5', 'LGR6', 'LHCGR', 'LHX8', 'LIF', 'LIMA1', 'LMNA', 'LMNB1', 'LOX', 'LRP4', 'LRP5L', 'LRP5', 'LRP6', 'LRRFIP1', 'LRRK2', 'LZTFL1', 'MACF1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8IP1', 'MAPK8', 'MAPK9', 'MDFIC', 'MDFI', 'MDK', 'MDM2', 'MED12', 'MED1', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'KMT2D', 'MLLT10', 'MLLT11', 'MLLT4', 'MLLT6', 'KMT2A', 'MME', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP25', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MRAP', 'MSH2', 'MSH6', 'MSN', 'MSX1', 'MSX2', 'MTDH', 'MTOR', 'MUC13', 'MUC1', 'MUTYH', 'MYCN', 'MYC', 'MYF5', 'MYO1D', 'MYO6', 'MYO7A', 'MYOD1', 'MYOG', 'NANOG', 'NCAM1', 'NCCRP1', 'NCOA2', 'NCSTN', 'NDP', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEURL2', 'NF1', 'NF2', 'NFAT5', 'NFKB1', 'NIT1', 'NKD1', 'NKX2-5', 'NLK', 'NME1', 'NOG', 'NONO', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR0B1', 'NR4A1', 'NR4A2', 'NR5A1', 'NR5A2', 'NRAS', 'NRIP1', 'NTRK1', 'NTRK2', 'NTRK3', 'NUDT5', 'NUMB', 'NUP153', 'NUTF2', 'OTX2', 'PAK1', 'PAK2', 'PAK3', 'PANK4', 'PARD3', 'PARD6A', 'PARK2', 'PARP1', 'PAX3', 'PAX6', 'PAX7', 'PAX8', 'PDGFRA', 'PDGFRB', 'PECAM1', 'PGK1', 'PGR', 'PHB', 'JADE1', 'PI3', 'PICK1', 'PIK3CA', 'PIK3R1', 'PIK3R2', 'PIN1', 'PIP5K1A', 'PIP5K1C', 'PITX2', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAG1', 'PLEKHA7', 'PLK1', 'PML', 'PMS2', 'POLE', 'PORCN', 'POTEF', 'POU5F1', 'PPARD', 'PPARG', 'PPM1A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R2B', 'PPP2R5A', 'PPP2R5B', 'PPP2R5C', 'PPP2R5D', 'PPP2R5E', 'PRKACA', 'PRKACB', 'PRKACG', 'PRKAR1A', 'PRKCA', 'PRKCG', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRL', 'PRMT1', 'PROC', 'PROM1', 'PROP1', 'PSEN1', 'PSEN2', 'PSENEN', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTEN', 'PTGES3', 'PTGS2', 'PTH1R', 'PTH', 'PTK2', 'PTK7', 'PTMA', 'PTN', 'PTPN11', 'PTPN13', 'PTPN1', 'PTPN6', 'PTPRB', 'PTPRC', 'PTPRF', 'PTPRG', 'PTPRJ', 'PTPRK', 'PTPRM', 'PTPRU', 'PTPRZ1', 'PVRL1', 'PVRL2', 'PXN', 'PYGO1', 'PYGO2', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RALGDS', 'RANBP3', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RAPGEF2', 'RAPGEF6', 'RAPSN', 'RARA', 'RARB', 'RARG', 'RARS', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP5', 'RBMX', 'RBPJ', 'RBX1', 'RELA', 'REM1', 'RET', 'RHOA', 'RIPK2', 'RNF220', 'RNF43', 'ROBO1', 'ROCK1', 'ROCK2', 'ROR2', 'RPRD1A', 'RPS27A', 'RPSA', 'RSPO1', 'RSPO2', 'RSPO3', 'RSPO4', 'RUNX2', 'RUNX3', 'RUVBL1', 'RUVBL2', 'RXRA', 'RYK', 'S100A4', 'S100A6', 'SALL1', 'SALL4', 'SATB1', 'SCRIB', 'SDHC', 'SERPINE1', 'SETD2', 'SETD7', 'SFN', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHFM1', 'SHH', 'SIAH1', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT6', 'SKP1', 'SLC6A3', 'SLC9A3R1', 'SLCO1B3', 'SLCO2A1', 'SLIT1', 'SLK', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD5', 'SMAD7', 'SMAD9', 'SMARCA2', 'SMARCA4', 'SMARCA5', 'SMARCB1', 'SMO', 'SMURF1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNX1', 'SOST', 'SOX10', 'SOX13', 'SOX17', 'SOX1', 'SOX2', 'SOX3', 'SOX4', 'SOX6', 'SOX7', 'SOX8', 'SOX9', 'SP1', 'SP7', 'SPAG9', 'SPATA13', 'SPEN', 'SPN', 'SPP1', 'SRC', 'STAT3', 'STK11', 'STRAP', 'STX4', 'SUFU', 'SUV39H1', 'SYP', 'TADA3', 'TAX1BP3', 'TAZ', 'TBL1XR1', 'TBL1X', 'TBX5', 'TBX6', 'TCF12', 'TCF3', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TFAP2A', 'TFCP2', 'TFF1', 'TFF2', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBR1', 'TGFBR2', 'TGM2', 'TJP1', 'TJP2', 'TLE1', 'TLE2', 'TLE3', 'TLE4', 'TNFRSF11B', 'TNFSF11', 'TNF', 'TNIK', 'TNKS2', 'TNKS', 'TNS1', 'TOB1', 'TOP2A', 'TP53', 'TRAF4', 'TRIM33', 'TRIM37', 'TRIP10', 'TRRAP', 'TSC2', 'TUBA1A', 'TWIST1', 'TYMS', 'T', 'UBA52', 'UBB', 'UBC', 'UBE2B', 'UBE2R2', 'UBE3A', 'UBR5', 'UCHL1', 'UMPS', 'UPRT', 'USP4', 'USP7', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VAV2', 'VAV3', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VHL', 'VIM', 'WDR64', 'WDTC1', 'WHSC1', 'WIF1', 'WISP1', 'WLS', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'WWTR1', 'XPO1', 'YAP1', 'YARS', 'YEATS4', 'YES1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'ZAP70', 'ZAR1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZIC3', 'ZNRF3', 'ZYX', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 1.764836364709158e-14 NRMSE: 3.4713539825121125e-15 MAPE: 8.479139089638558e-12 Pearson Correlation: 0.2720182106857889 Spearman Correlation: 0.20907741991795412 Coefficient of Determination: -6.420647744823541 RMSE: 1.6697843679310465 NRMSE: 0.5458773964271622 MAPE: 1389.641093064068 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.4763566345298339, tolerance: 0.03183156097646061 positive)
Pearson Correlation: 0.9999905658933059 Spearman Correlation: 0.999980310855755 Coefficient of Determination: 0.9999796159284196 RMSE: 0.00347282819047296 NRMSE: 0.0006830897306201732 MAPE: 1.313351061275369 Pearson Correlation: 0.14708361103380868 Spearman Correlation: 0.13175476003441441 Coefficient of Determination: -3.8258461631910166 RMSE: 1.3465615816706678 NRMSE: 0.440211050269923 MAPE: 1927.5304087179557 Predictor: RandomForests Pearson Correlation: 0.6759799490124614 Spearman Correlation: 0.6672207497533661 Coefficient of Determination: 0.4499730499716307 RMSE: 0.5704660652230691 NRMSE: 0.1122081166843173 MAPE: 245.27036742599236 Pearson Correlation: 0.44935709301694193 Spearman Correlation: 0.3349692639559097 Coefficient of Determination: 0.18377873651508103 RMSE: 0.5537878651614647 NRMSE: 0.18104150680357797 MAPE: 1039.8099966064203 Protein: CCNE1 Protein Interaction Partners Count: 350 x_train_column_count: 347 x_train columns: ['ABL1', 'AKT1', 'AKT2', 'AKT3', 'ALDH18A1', 'ANAPC10', 'ANAPC13', 'ANAPC1', 'ANAPC2', 'ANAPC4', 'ANAPC5', 'ANAPC7', 'ANXA5', 'ARID1A', 'AR', 'ATM', 'AURKA', 'AURKB', 'BARD1', 'BCL2L1', 'BIRC5', 'BRCA1', 'BRCA2', 'BTG2', 'BTRC', 'BUB1B', 'BUB1', 'BUB3', 'RGCC', 'MLIP', 'CABLES1', 'CALM1', 'CAPRIN1', 'CASP3', 'CASP9', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNF', 'CCNG1', 'CCNH', 'CCNK', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CDC16', 'CDC20', 'CDC23', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC26', 'CDC27', 'CDC45', 'CDC6', 'CDC7', 'CDCA2', 'CDCA5', 'CDCA8', 'CDH1', 'CDK12', 'CDK13', 'CDK14', 'CDK15', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CENPA', 'CENPE', 'CHAF1A', 'CHD1L', 'CHEK1', 'CHEK2', 'CINP', 'CKS1B', 'CKS2', 'COPS5', 'CREBBP', 'CSK', 'CTNNB1', 'CUL1', 'CUL3', 'CUL4B', 'DBF4B', 'DBF4', 'DGCR8', 'DICER1', 'DTL', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'EBNA1BP2', 'ECT2', 'EGFR', 'EGF', 'ELAVL1', 'ELSPBP1', 'EP400', 'ERBB2', 'ERBB3', 'ERBB4', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM58A', 'FAM83H', 'FBXO5', 'FBXW7', 'FEN1', 'FGFR1', 'FGFR2', 'FGFR3', 'FOXM1', 'FZR1', 'GAPDH', 'GLI1', 'GMNN', 'GSK3B', 'H1F0', 'HDAC1', 'HEATR3', 'HERC5', 'HIST1H1A', 'HIST1H1B', 'HIST1H4A', 'HRAS', 'IFNAR1', 'IGF1R', 'IGF1', 'ITPKB', 'JUN', 'KIF11', 'KIF20A', 'KIF23', 'KIF2C', 'KPNA2', 'KRAS', 'LATS2', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'GMNC', 'MAD2L1', 'MAPK3', 'MATK', 'MAX', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDM2', 'MEGF11', 'MELK', 'MKI67', 'KMT2D', 'KMT2B', 'MNAT1', 'MRE11A', 'MTOR', 'MYBL2', 'MYC', 'NBN', 'NF1', 'NFYB', 'NMI', 'NOTCH1', 'NOTCH3', 'NPAT', 'NRAS', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PARK2', 'PARP1', 'PCBP4', 'PCNA', 'PIK3CA', 'PIK3R1', 'PKMYT1', 'PLK1', 'PLK4', 'POLA1', 'POLD1', 'PPP1R1C', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R4', 'PRC1', 'PRKAR1A', 'PRKAR2A', 'PRMT5', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB10', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSMF1', 'PTEN', 'PTGDR', 'PTK6', 'PTTG1', 'RAD51', 'RAD54L', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RBX1', 'REL', 'REM1', 'RHOA', 'RHOBTB3', 'RINT1', 'RNASE1', 'RPRD1A', 'RPS27A', 'RRM1', 'RRM2', 'RRN3', 'RSF1', 'SHFM1', 'SKP1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'ST8SIA1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STK3', 'STK4', 'TARBP1', 'TCP1', 'TERF1', 'TERT', 'TFDP1', 'TK1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TPX2', 'TTK', 'TUBG1', 'TYMS', 'UBA52', 'UBB', 'UBC', 'UBE2C', 'UBE2QL1', 'UBE2S', 'UHRF2', 'WEE1', 'WEE2', 'XIAP', 'YAP1', 'ZNF217', 'ZNF33A', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.9634512426452688 Spearman Correlation: 0.877580012336347 Coefficient of Determination: 0.9282382969547128 RMSE: 0.13994862668361904 NRMSE: 0.03377383176475591 MAPE: 23.608953704565085 Pearson Correlation: 0.46929199860391135 Spearman Correlation: 0.29576179254105417 Coefficient of Determination: -0.7862742529955915 RMSE: 0.4876793909704997 NRMSE: 0.21243167267957472 MAPE: 116.86575662801977 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 5.6000675309862675, tolerance: 0.014683406463848499 positive)
Pearson Correlation: 0.9626389997399364 Spearman Correlation: 0.8741653907735402 Coefficient of Determination: 0.9266728471039651 RMSE: 0.14146685024288896 NRMSE: 0.03414022497837415 MAPE: 23.647159937292276 Pearson Correlation: 0.4967150991638226 Spearman Correlation: 0.3014975249067944 Coefficient of Determination: -0.5555048040791049 RMSE: 0.4550886582376556 NRMSE: 0.1982352477404084 MAPE: 97.96340045006428 Predictor: RandomForests Pearson Correlation: 0.8640709868805985 Spearman Correlation: 0.7271815999793318 Coefficient of Determination: 0.7426045372181613 RMSE: 0.2650468921819653 NRMSE: 0.06396382271447386 MAPE: 55.659360733982865 Pearson Correlation: 0.7733595740913468 Spearman Correlation: 0.6680465876852942 Coefficient of Determination: 0.544739912409206 RMSE: 0.24620117572034597 NRMSE: 0.10724449001191182 MAPE: 78.93821153688324 Protein: CCND1 Protein Interaction Partners Count: 857 x_train_column_count: 849 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTL6B', 'AFP', 'AHR', 'AKAP12', 'AKAP8', 'AKR1B10', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDOA', 'ALK', 'ANO1', 'ANXA5', 'APAF1', 'APC', 'APEX1', 'AREG', 'ARHGEF2', 'ARID1A', 'ARID1B', 'ARID2', 'ARID4A', 'AR', 'ASIP', 'ATF2', 'ATF3', 'ATF4', 'ATM', 'ATXN1', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'B2M', 'BANP', 'BARX2', 'BAX', 'BCAR1', 'BCAR3', 'BCCIP', 'BCL2A1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL3', 'BCL6', 'BCL9', 'BECN1', 'BGLAP', 'BHLHE40', 'BIRC2', 'BIRC3', 'BIRC5', 'BMI1', 'BMP4', 'BMP6', 'BRAF', 'BRCA1', 'BRCA2', 'BRD2', 'BRD4', 'BTC', 'BTG2', 'BTRC', 'RGCC', 'COPRS', 'CA9', 'CARD11', 'CARM1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBFB', 'CCDC62', 'CCL2', 'CCL5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNC', 'CCND2', 'CCND3', 'CCNDBP1', 'CCNE1', 'CCNE2', 'CCNG2', 'CCNH', 'CCNK', 'CCNL1', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CD19', 'CD22', 'CD24', 'CD34', 'CD38', 'CD44', 'CD5', 'CD79A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC6', 'CDC73', 'CDCA7L', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK12', 'CDK13', 'CDK14', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK20', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CDX2', 'CENPE', 'CEP57', 'CFLAR', 'CHEK1', 'CHEK2', 'CHKA', 'CHUK', 'CKS1B', 'CKS2', 'CLCN3', 'COL1A1', 'CR2', 'CREB1', 'CREBBP', 'CRKL', 'CRYAB', 'CSF2', 'CTBP1', 'CTGF', 'CTNNB1', 'CTNND1', 'CTTN', 'CUL1', 'CUL3', 'CUL7', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'CYR61', 'DACH1', 'DAXX', 'DDIT3', 'DDX53', 'DECR1', 'DHFR', 'DICER1', 'DKK1', 'DKK3', 'DLL1', 'DMTF1', 'DND1', 'DNMT1', 'DNMT3A', 'DNTT', 'DVL1', 'DVL2', 'DYRK1A', 'DYRK1B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EDN1', 'EEF1A1', 'EGFR', 'EGF', 'EGLN2', 'EGR1', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF3I', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4E', 'EIF4G1', 'ELAVL1', 'ELSPBP1', 'EP300', 'EPCAM', 'EPHA2', 'EPHA7', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EWSR1', 'EYA1', 'EZH2', 'FABP4', 'FADD', 'FAM58A', 'FAM83H', 'FASLG', 'FAT1', 'FBXO31', 'FBXO4', 'FBXW7', 'FBXW8', 'FGF13', 'FGF19', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FHL2', 'FIGF', 'FLCN', 'FLNA', 'FLT1', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXC1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FRZB', 'FSTL3', 'FZD1', 'FZD2', 'FZD7', 'FZD9', 'FZR1', 'GADD45A', 'GAL', 'GAPDH', 'GAST', 'GATA3', 'GATA4', 'GDF15', 'GDF2', 'GGNBP2', 'GGT1', 'GIT1', 'GJA1', 'GJB1', 'GLI1', 'GLI2', 'GLI3', 'GLTSCR2', 'GNB2L1', 'GPER1', 'GRB2', 'GREB1', 'GRM4', 'GRP', 'GSK3B', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HBEGF', 'HBZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC4', 'HEXIM1', 'HEY1', 'HGF', 'HIF1A', 'HIST1H2AA', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AH', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AC', 'HIST2H2BE', 'HIST2H4A', 'HIST4H4', 'HMGA2', 'HMOX1', 'HNF1A', 'HNF4A', 'HNRNPD', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB8', 'ICAM1', 'ID1', 'ID2', 'IFNAR1', 'IFNB1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP3', 'IGFBP5', 'IHH', 'IKBKB', 'IL10', 'IL17A', 'IL2', 'IL4', 'IL6', 'IL7', 'CXCL8', 'ILK', 'INSM1', 'INS', 'IRF1', 'IRS1', 'ISG15', 'ITGB1', 'ITPKB', 'ITPKC', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUNB', 'JUND', 'JUN', 'KAT2A', 'KAT2B', 'KDM1A', 'KDM5B', 'KDR', 'KHDRBS1', 'KIF18B', 'KIN', 'KITLG', 'KIT', 'KLF13', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KRAS', 'KRT10', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LDB3', 'LEF1', 'LEP', 'LGALS3', 'LGR5', 'LIMK2', 'LIMS1', 'LIN28B', 'LMNA', 'LMNB1', 'LOX', 'LRP5', 'LRP6', 'LYN', 'MAFB', 'MAF', 'MAML1', 'MAML2', 'MAML3', 'MAMLD1', 'MAP2K1', 'MAP2K2', 'MAP2K4', 'MAP2K7', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDK', 'MDM2', 'MDM4', 'MEN1', 'MET', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'MLXIPL', 'MME', 'MMP11', 'MMP14', 'MMP15', 'MMP1', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MNAT1', 'MOV10', 'MSH2', 'MST1', 'MTOR', 'MUC1', 'MYBL2', 'MYB', 'MYCN', 'MYC', 'MYEOV', 'MYF5', 'MYOD1', 'MYOG', 'NACA2', 'NADSYN1', 'NANOG', 'NCAM1', 'NCOA1', 'NCOA3', 'NCOR1', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NGF', 'NKX2-1', 'NME1-NME2', 'NME1', 'NME2', 'NMI', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NQO1', 'NR0B2', 'NR1H3', 'NR2E1', 'NR3C1', 'NR4A3', 'NRAS', 'NRF1', 'NUDT21', 'ODC1', 'ORAI1', 'ORAOV1', 'ORC4', 'PAK1', 'PAK4', 'PARK2', 'PARP1', 'PAX2', 'PAX5', 'PAX6', 'PBRM1', 'PBX3', 'PCNA', 'PDCD4', 'PDGFRA', 'PDGFRB', 'PDZK1', 'PECAM1', 'PELP1', 'PGR', 'PI3', 'PI4K2A', 'PIK3CA', 'PIK3R1', 'PKLR', 'PKM', 'PLAUR', 'PLAU', 'PLK1', 'PMAIP1', 'POLR2A', 'POTEF', 'POU2F1', 'POU5F1', 'PPARG', 'PPP2R4', 'PRDM5', 'PRKACA', 'PRL', 'PRMT5', 'PRNP', 'PROM1', 'PSAT1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTCHD3', 'PTEN', 'PTF1A', 'PTGS2', 'PTHLH', 'PTH', 'PTK2', 'PTK6', 'PTPN11', 'PTPRCAP', 'PTPRC', 'PXN', 'RAD51', 'RAF1', 'RALA', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RBX1', 'RCC1', 'RELA', 'RELB', 'REL', 'REM1', 'RET', 'RHEB', 'RHOA', 'RHOC', 'RICTOR', 'RNASE1', 'DROSHA', 'RND3', 'RNMT', 'ROCK1', 'RPRD1B', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KA6', 'RPS6KB1', 'RPS6', 'RPTOR', 'RREB1', 'RSF1', 'RUNX1', 'RUNX2', 'RUNX3', 'SDC1', 'SDHC', 'SENP1', 'SERPINE1', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHC1', 'SHFM1', 'SHH', 'SIRT1', 'SIX1', 'SIX3', 'SKP1', 'SKP2', 'SLC25A16', 'SLC25A6', 'SLC2A1', 'SLC35B2', 'SLC39A4', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMO', 'SNAI1', 'SNAI2', 'SNCA', 'SNIP1', 'SNW1', 'SNX33', 'SOCS3', 'SOX11', 'SOX17', 'SOX2', 'SOX4', 'SOX6', 'SOX9', 'SP1', 'SPN', 'SPP1', 'SPRY1', 'SRC', 'SREBF1', 'STAT1', 'STAT3', 'STAT4', 'STAT5A', 'STAT5B', 'STAT6', 'STC2', 'STIM1', 'STK11', 'STK24', 'STMN1', 'SUFU', 'SULF2', 'SUV39H1', 'TAF1', 'TBP', 'TBX2', 'TCEAL7', 'TCF4', 'TCF7L2', 'TCF7', 'TERT', 'TET3', 'TFDP1', 'TFF1', 'TGFA', 'TGFB1', 'TGFBR2', 'THBS1', 'THRA', 'THRB', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLR9', 'TM4SF1', 'TMPRSS4', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF8', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP2A', 'TP53', 'TP63', 'TP73', 'TRPV2', 'TSC22D3', 'TSC2', 'TWIST1', 'TXN', 'TYMS', 'UBA52', 'UBA7', 'UBB', 'UBC', 'UBE2C', 'UBTF', 'URGCP', 'USP18', 'USP2', 'USP9X', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VIP', 'VRK1', 'WDR77', 'WDTC1', 'WEE1', 'WHSC1', 'WIF1', 'WISP1', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'XBP1', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YY1', 'ZBTB17', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.1839117690787912e-14 NRMSE: 7.11733518341003e-15 MAPE: 3.404709888697482e-11 Pearson Correlation: 0.14234528325754725 Spearman Correlation: 0.12002892804149679 Coefficient of Determination: -11.082023320657258 RMSE: 0.7290381426329557 NRMSE: 0.6908153304018229 MAPE: 887.9760636801298 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.17854240124853074, tolerance: 0.0032202923923696524 positive)
Pearson Correlation: 0.9998737629855767 Spearman Correlation: 0.9997797012131963 Coefficient of Determination: 0.9997205502690062 RMSE: 0.004089859258013259 NRMSE: 0.002458705112366846 MAPE: 9.138528686241749 Pearson Correlation: 0.11964143193511977 Spearman Correlation: 0.13792441302260627 Coefficient of Determination: -7.72461553377698 RMSE: 0.6195174804182793 NRMSE: 0.5870367377202195 MAPE: 816.0740208717265 Predictor: RandomForests Pearson Correlation: 0.5772177113737843 Spearman Correlation: 0.550204785406144 Coefficient of Determination: 0.2845960696954034 RMSE: 0.2069341540942244 NRMSE: 0.12440282916775343 MAPE: 487.8931361371988 Pearson Correlation: 0.39246457786917033 Spearman Correlation: 0.3719772066983379 Coefficient of Determination: 0.14342072936184758 RMSE: 0.1941172794591912 NRMSE: 0.18393988558952287 MAPE: 348.3674372115515 Protein: ERBB2 Protein Interaction Partners Count: 663 x_train_column_count: 657 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACPP', 'ACTA2', 'ACTB', 'ACTG1', 'ADAM10', 'ADAM17', 'ADRB2', 'AFP', 'AGRN', 'AKT1S1', 'AKT1', 'AKT2', 'ALB', 'ALDH1A1', 'ALK', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'ANO1', 'ANXA2', 'ANXA5', 'AP2B1', 'APP', 'AREG', 'ARHGEF11', 'ARHGEF12', 'ARID1A', 'ARL6IP5', 'AR', 'ATM', 'ATP2B2', 'AURKB', 'AXIN1', 'BAG1', 'BARD1', 'BCAR1', 'BCAR3', 'BCAS1', 'BCL2L11', 'BCL2L1', 'BDNF', 'BECN1', 'BEST1', 'BIRC5', 'BLNK', 'BMI1', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BSG', 'BTC', 'MIEN1', 'CA9', 'CALU', 'CARTPT', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAV1', 'CBLB', 'CBLC', 'CBL', 'CCL27', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD19', 'CD22', 'CD247', 'CD24', 'CD274', 'CD28', 'CD33', 'CD34', 'CD44', 'CD46', 'CD52', 'CD68', 'CD6', 'CD80', 'CD82', 'CDC37', 'CDC42', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK4', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CEACAM5', 'CEP70', 'CHEK2', 'CHGA', 'CHKA', 'CHKB', 'CISH', 'CLDN3', 'CLDN4', 'CLDN7', 'CLTC', 'CNN1', 'COPS5', 'CPNE3', 'CREB1', 'CRKL', 'CRK', 'YBX3', 'CSF1', 'CSF2', 'CSF3', 'CSK', 'CSPG4', 'CTAG1B', 'CTLA4', 'CTNNB1', 'CTNND1', 'CTSB', 'CTSD', 'CTTN', 'CUL5', 'CXCL12', 'CXCR1', 'CXCR4', 'CYCS', 'CYP19A1', 'CYTIP', 'DCN', 'DDX41', 'DDX53', 'DHH', 'DIAPH1', 'DICER1', 'DLG4', 'DMTF1', 'DNAJA3', 'DNM2', 'DNMT1', 'DOCK1', 'DOCK7', 'DUSP6', 'E2F1', 'E2F3', 'EEA1', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EGFR', 'EGF', 'EIF3A', 'EIF4EBP1', 'EIF4E', 'ELAVL1', 'ELF3', 'EML4', 'ENO2', 'EP300', 'EPCAM', 'EPGN', 'EPHA2', 'EPS15', 'EPX', 'ERAL1', 'ERBB2IP', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ERRFI1', 'ESCO1', 'ESR1', 'ESR2', 'ESRRB', 'ETS1', 'ETS2', 'ETV4', 'ETV6', 'EZH2', 'EZR', 'FASLG', 'FASN', 'FBXW7', 'FCGR1A', 'FCGR1B', 'FCGRT', 'FGF10', 'FGF13', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FIGF', 'FLT1', 'FLT3LG', 'FN1', 'FOLH1', 'FOLR1', 'FOS', 'FOXA1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXP3', 'FREM2', 'FSIP1', 'FYN', 'GAB1', 'GABPB1', 'GAPDH', 'GATA3', 'GATA4', 'GDF2', 'GLI1', 'GLI2', 'GLS', 'GNA11', 'GNAQ', 'GNAS', 'GNRH1', 'GPER1', 'GRAP2', 'GRB2', 'GRB7', 'GSTP1', 'GZMB', 'H2AFX', 'H2AFY', 'HBEGF', 'HDAC1', 'HDAC6', 'HEATR6', 'HGF', 'HIF1A', 'HK1', 'HLA-A', 'HMGA2', 'HNF4A', 'HOXB7', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPG2', 'ICAM1', 'ID1', 'IDH1', 'IDH2', 'IFNG', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IHH', 'IL10', 'IL2', 'IL4', 'IL6R', 'IL6ST', 'IL6', 'CXCL8', 'ILK', 'INPP4B', 'INS', 'IQGAP1', 'IQSEC1', 'IRS1', 'ITGA5', 'ITGA6', 'ITGAV', 'ITGB1', 'ITGB3', 'ITGB4', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JUN', 'JUP', 'KDR', 'KITLG', 'KLK3', 'KLRK1', 'KRAS', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'L1CAM', 'LAMP1', 'LCN2', 'LDHA', 'LEP', 'LIN28A', 'LIN7A', 'LIN7B', 'LIN7C', 'LINGO1', 'LOX', 'LRIG1', 'LRPPRC', 'MAGEA1', 'MAGEA3', 'MAGED4B', 'MAGED4', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK8', 'MATK', 'MCL1', 'MDK', 'MDM2', 'MEMO1', 'MET', 'MGMT', 'MKI67', 'MLANA', 'MLH1', 'KMT2C', 'MME', 'MMP11', 'MMP14', 'MMP16', 'MMP1', 'MMP2', 'MMP7', 'MMP9', 'MPP1', 'MRAP', 'MRAS', 'MSH2', 'MSH6', 'MSLN', 'MTA1', 'MTOR', 'MUC13', 'MUC16', 'MUC1', 'MUC4', 'MUC6', 'MUCL1', 'MYBL2', 'MYCN', 'MYC', 'NANOG', 'NCAM1', 'NCL', 'NCOA1', 'NCOA3', 'NCOR1', 'NDRG1', 'NF1', 'NF2', 'NFE2L2', 'NGF', 'NISCH', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NR1H4', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NRP1', 'NTF3', 'NTF4', 'OPCML', 'OSMR', 'PA2G4', 'PADI2', 'PAK1', 'PALB2', 'PAQR3', 'PARP1', 'PAX2', 'PCSK9', 'PDCD1LG2', 'PDCD1', 'PDCD4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PDGFRA', 'PDPN', 'PECAM1', 'PELP1', 'PEPD', 'PFKFB3', 'PGAP3', 'PGF', 'PGR', 'PI3', 'PIK3C2A', 'PIK3C2B', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIN1', 'PIP', 'PLAUR', 'PLAU', 'PLCG1', 'PLCG2', 'PLEK', 'PLG', 'PLXNB1', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPP3CA', 'PRDM10', 'PRF1', 'PRKACA', 'PRL', 'PROM1', 'PSCA', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'PTPN1', 'PTPRC', 'PTPRO', 'PTPRU', 'PTS', 'PXN', 'RAB25', 'RAD51', 'RAF1', 'RANBP2', 'RARA', 'RASA1', 'RASA2', 'RASSF1', 'RB1', 'RBPJ', 'RDX', 'RECK', 'REM1', 'REN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'S100A14', 'SCGB2A2', 'SCUBE2', 'SDC1', 'SDHC', 'SEMA3D', 'SEMA4D', 'SERPINB5', 'SERPINE1', 'SFRP1', 'PEAK1', 'SH3BGRL3', 'SH3BGRL', 'SH3TC2', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SIAH2', 'PMEL', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC4A7', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SMUG1', 'SMYD3', 'SNAI1', 'SNAI2', 'SOCS1', 'SOS1', 'SOX10', 'SOX2', 'SOX9', 'SP3', 'SPP1', 'SPRY2', 'SRCIN1', 'SRC', 'STARD3', 'STAT1', 'STAT2', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STOM', 'STUB1', 'SYP', 'TAGLN', 'TBX1', 'TERT', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TFRC', 'TGFA', 'TGFB1', 'THBS1', 'THRA', 'TIMP1', 'TJP1', 'TMPRSS2', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF4', 'TNFRSF8', 'TNFRSF9', 'TNFSF11', 'TNF', 'TNS1', 'TNS3', 'TNS4', 'TOB1', 'TOP1', 'TOP2A', 'TP53', 'TP63', 'TSC2', 'TWIST1', 'TYMS', 'TYR', 'UBA52', 'UBB', 'UBC', 'USP2', 'USP9X', 'VAV1', 'VAV2', 'VAV3', 'VCL', 'VEGFA', 'VEGFB', 'VEGFC', 'VIM', 'WASL', 'WDFY2', 'WDTC1', 'WNT10A', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7B', 'WNT9A', 'WNT9B', 'WT1', 'WWOX', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YES1', 'YY1', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 9.469037196604839e-14 NRMSE: 1.6132063302391672e-14 MAPE: 4.219823442030679e-11 Pearson Correlation: 0.4712513652378641 Spearman Correlation: 0.3595560537616154 Coefficient of Determination: -3.0247071265452607 RMSE: 2.139659934546368 NRMSE: 0.38596939435499816 MAPE: 872.9991382539355 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.9683636032954734, tolerance: 0.05179983228777935 positive)
Pearson Correlation: 0.9998217787783664 Spearman Correlation: 0.9994806458409213 Coefficient of Determination: 0.999641265197011 RMSE: 0.01858488144737621 NRMSE: 0.003166240429217202 MAPE: 27.928382742973586 Pearson Correlation: 0.5131472084446478 Spearman Correlation: 0.46570464183460164 Coefficient of Determination: -1.328302179712677 RMSE: 1.6274111437953258 NRMSE: 0.29356575939738183 MAPE: 608.900604982473 Predictor: RandomForests Pearson Correlation: 0.846909847073551 Spearman Correlation: 0.6820627790893955 Coefficient of Determination: 0.7100735211474967 RMSE: 0.5283442429324748 NRMSE: 0.0900121374060812 MAPE: 551.3013161115801 Pearson Correlation: 0.8508230084019966 Spearman Correlation: 0.7038602771063124 Coefficient of Determination: 0.7193829313808946 RMSE: 0.5649820563125258 NRMSE: 0.10191609356961648 MAPE: 198.11534034275425 Protein: ERBB3 Protein Interaction Partners Count: 245 x_train_column_count: 247 x_train columns: ['ADAM17', 'AGRN', 'AGTR2', 'AKT1', 'AKT2', 'AKT3', 'ALAS2', 'ALB', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'APIP', 'AREG', 'AR', 'BAMBI', 'BDNF', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BTC', 'CADM4', 'CASK', 'CASP3', 'CBLB', 'CBLC', 'CBL', 'CCND1', 'CCNE1', 'CD44', 'CD82', 'CDC42', 'CDH1', 'CDK4', 'CDK5', 'CDKN1B', 'CDKN2A', 'CLEC16A', 'COMMD5', 'COQ7', 'CRKL', 'CRK', 'CRYZL1', 'CSF1', 'CSK', 'CSPG5', 'CTNNB1', 'DCN', 'DHH', 'DOCK7', 'DUSP6', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EIF4EBP1', 'EIF4E', 'EML4', 'EPCAM', 'EPGN', 'EPN1', 'ERBB2IP', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'ESR2', 'FBXO9', 'FGF10', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FIGF', 'FKBP14', 'FLNA', 'FLT3LG', 'FN1', 'FOXA1', 'FOXO3', 'FREM2', 'FTSJ1', 'GAB1', 'GAPDH', 'GLE1', 'GRB2', 'GRB7', 'GRHL2', 'HBEGF', 'HGF', 'HGS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPG2', 'IGF1', 'IGF2', 'IL6ST', 'ILK', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'ITPKB', 'JAK1', 'JAK2', 'JUN', 'KDR', 'KITLG', 'KRAS', 'L1CAM', 'LAMA1', 'LAMB1', 'LAMC2', 'LIN7A', 'LIN7B', 'LIN7C', 'LRIG1', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARCH7', 'MDM2', 'MET', 'MITF', 'MMP9', 'MRPL49', 'MTOR', 'MUC1', 'MUC4', 'MYC', 'N4BP1', 'NDRG1', 'NEDD4L', 'NEDD4', 'NF1', 'NGF', 'NICN1', 'NOTCH1', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NTF3', 'NTF4', 'OAT', 'PA2G4', 'PARK7', 'PCSK9', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PGR', 'PI3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIP5K1C', 'PLCG1', 'PLCG2', 'PPP1R9A', 'PRKACA', 'PTEN', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN22', 'PTPN2', 'RASA1', 'RASA2', 'REM1', 'RGS4', 'RHOA', 'RHOC', 'RNF41', 'ROR1', 'RRAS2', 'SH2B3', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SLC25A16', 'SMAD4', 'SNAI2', 'SOS1', 'SOX10', 'SOX2', 'SPARC', 'SPRY2', 'SRC', 'STAT3', 'STAT5A', 'STAT5B', 'SYN3', 'TCF7L2', 'TGFA', 'TMEFF2', 'TNFRSF13C', 'TNS1', 'TP53', 'USP8', 'VAV1', 'VAV2', 'VAV3', 'VEGFA', 'VEGFB', 'VEGFC', 'WNT1', 'WNT5A', 'ZEB1', 'ZNF217', 'KRBOX4', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.7761325970082843 Spearman Correlation: 0.7743758752711548 Coefficient of Determination: 0.6023818081388239 RMSE: 0.28438971721116135 NRMSE: 0.10311933383776659 MAPE: 179.5494942065767 Pearson Correlation: 0.1534345113047054 Spearman Correlation: 0.22196037357074283 Coefficient of Determination: -0.43664162260418027 RMSE: 0.5929734235721751 NRMSE: 0.16486367514344202 MAPE: 216.1437140447374 Predictor: ElasticNet Pearson Correlation: 0.7731058911930369 Spearman Correlation: 0.7698116153322011 Coefficient of Determination: 0.5976564240587111 RMSE: 0.286074601811335 NRMSE: 0.10373027075653855 MAPE: 183.3870674820154 Pearson Correlation: 0.16605047920593258 Spearman Correlation: 0.22891307871669228 Coefficient of Determination: -0.37936050107733865 RMSE: 0.5810317966691328 NRMSE: 0.1615435592323995 MAPE: 218.58203257546384 Predictor: RandomForests Pearson Correlation: 0.5697944181587821 Spearman Correlation: 0.598669576242176 Coefficient of Determination: 0.30652921691519774 RMSE: 0.3755734214232018 NRMSE: 0.13618242390801663 MAPE: 234.9619493968737 Pearson Correlation: 0.3702335949111575 Spearman Correlation: 0.367867429768451 Coefficient of Determination: 0.11116928837173923 RMSE: 0.4664128778650627 NRMSE: 0.12967620153334614 MAPE: 157.4211823737298 Fold: 4 Protein: RB1 Protein Interaction Partners Count: 369 x_train_column_count: 366 x_train columns: ['AATF', 'ABCC1', 'ABL1', 'ACTL6A', 'ACTL6B', 'AFAP1', 'AHR', 'AKT1', 'ANXA5', 'ARID1A', 'ARID1B', 'ARID4A', 'ARMCX1', 'ARMCX2', 'ARMCX3', 'ARNT', 'AR', 'ASF1A', 'ATF2', 'ATM', 'AURKB', 'BCR', 'BDP1', 'BGLAP', 'BRCA1', 'BRF1', 'FAM208A', 'C4BPA', 'CABIN1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CBFB', 'CBX1', 'CBX4', 'CBX5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNT2', 'CDC25A', 'CDC27', 'CDC6', 'CDH1', 'CDK14', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPA', 'CEBPB', 'CEBPD', 'CEBPE', 'CHEK1', 'CHEK2', 'CLNK', 'COL1A1', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUX1', 'DCAF10', 'DGKZ', 'DNAJA3', 'DNMT1', 'DNMT3A', 'DUSP1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EGFR', 'EGF', 'EID1', 'EIF2AK1', 'EIF2AK4', 'AGO2', 'ELF1', 'ENC1', 'EP300', 'ERBB2', 'ESD', 'ESR1', 'ESR2', 'EZH2', 'FBXW7', 'FMO5', 'FOS', 'FOXM1', 'FRK', 'FZR1', 'G6PD', 'GAPDH', 'GATA1', 'GJA1', 'GNB2L1', 'GRB2', 'GSC', 'GTF2H1', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HARS2', 'HARS', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC8', 'HDC', 'HES1', 'HIF1A', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HIST4H4', 'HMGA1', 'HMGA2', 'HRAS', 'HSP90AA1', 'HSPA1A', 'HSPA8', 'ID2', 'IFI16', 'INS', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'KDM2A', 'KDM4A', 'KDM5A', 'KDM5B', 'PPP1R26', 'KIF11', 'KRAS', 'KRT10', 'KRT14', 'KRT5', 'L3MBTL2', 'L3MBTL1', 'LIMD1', 'LIN52', 'LIN54', 'LIN9', 'LMNA', 'LOR', 'LPAR6', 'MAF', 'MAP2K7', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEF2C', 'MORF4L1', 'MRFAP1', 'MRPL11', 'MRPS18B', 'MSH6', 'MTL5', 'MYBL2', 'MYC', 'MYOD1', 'NACC2', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NCR1', 'NDC80', 'NEO1', 'NFYA', 'NFYB', 'NFYC', 'NGF', 'NOTCH1', 'NPM1', 'NRAS', 'ORC1', 'PA2G4', 'PAX2', 'PAX3', 'PAX5', 'PAX6', 'PAX8', 'PCNA', 'PELP1', 'PGR', 'PHB', 'PHF21B', 'PIAS4', 'PIK3CA', 'PIK3R1', 'PIK3R3', 'PLK1', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPIA', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP1R3A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R3B', 'PPRC1', 'PRB1', 'PRB3', 'PRB4', 'PRDM2', 'PRH1', 'PRH2', 'PRIM1', 'PRIM2', 'PRKCB', 'PRMT2', 'PSMA7', 'PSMC1', 'PSMD10', 'PTEN', 'PTGDR', 'RAF1', 'RB1CC1', 'RBAK', 'RBBP4', 'RBBP5', 'RBBP6', 'RBBP7', 'RBBP8', 'RBBP9', 'RBL1', 'RBL2', 'RBFOX2', 'RFC1', 'RPS6KB1', 'RUNX2', 'S100A6', 'SETD1B', 'SETD7', 'SIRT1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMC1A', 'SMC2', 'SMC4', 'SMC5', 'SMYD2', 'SNW1', 'SP100', 'SP1', 'SP3', 'SPI1', 'STAM', 'STAT3', 'SUV39H1', 'SUV420H2', 'SUZ12', 'TAF1', 'TBP', 'TERT', 'TFAP2A', 'TFDP1', 'TFDP3', 'TGM2', 'THAP1', 'TMPO', 'TNS1', 'TOP2A', 'TP53BP1', 'TP53', 'TP73', 'TRDMT1', 'TRIM27', 'TTK', 'UBE2I', 'UBE3A', 'UBL4A', 'UBN1', 'UBR4', 'UBTF', 'UHRF1', 'USP4', 'USP7', 'VEGFA', 'VPS39', 'WDR59', 'WDR73', 'WEE1', 'WWTR1', 'YAP1', 'YY1', 'ZBTB16', 'ZBTB7A', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.8268703350763362 Spearman Correlation: 0.7578241515973115 Coefficient of Determination: 0.6837145510292526 RMSE: 0.14144783714612355 NRMSE: 0.051729021776668944 MAPE: 333.9895480877845 Pearson Correlation: -0.06973641674384799 Spearman Correlation: -0.039344630232297166 Coefficient of Determination: -12.600726353178217 RMSE: 0.6080722966940459 NRMSE: 0.582600981771017 MAPE: 953.2028453786296 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 6.382060668279259, tolerance: 0.0034032643600116126 positive)
Pearson Correlation: 0.8100141665232313 Spearman Correlation: 0.7503453595212555 Coefficient of Determination: 0.6556601486793759 RMSE: 0.14758776254485284 NRMSE: 0.05397445967848626 MAPE: 403.01776366654155 Pearson Correlation: -0.07241810940951836 Spearman Correlation: -0.06390353994438834 Coefficient of Determination: -7.7542798614099055 RMSE: 0.4878478322250732 NRMSE: 0.46741255530704906 MAPE: 749.7219367767401 Predictor: RandomForests Pearson Correlation: 0.5793800457140716 Spearman Correlation: 0.4352192694372206 Coefficient of Determination: 0.1884714823993323 RMSE: 0.2265732310234822 NRMSE: 0.08286030976575563 MAPE: 177.20290416760355 Pearson Correlation: 0.0526387952800828 Spearman Correlation: 0.13829848252471977 Coefficient of Determination: -0.12007331950836031 RMSE: 0.17450078803985147 NRMSE: 0.16719118924601567 MAPE: 121.55710028496003 Protein: CDH1 Protein Interaction Partners Count: 834 x_train_column_count: 826 x_train columns: ['ABCB1', 'ABCG2', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTR3', 'ACVR1B', 'ADAM10', 'ADAM15', 'ADAM17', 'ADAM9', 'AFP', 'AIMP1', 'AJAP1', 'AKAP9', 'AKT1', 'AKT2', 'AKTIP', 'ALB', 'ALCAM', 'ALDH1A1', 'ALDH3A1', 'ALK', 'AMOTL2', 'ANAPC4', 'ANAPC7', 'ANO1', 'ANXA2', 'ANXA5', 'AP1M1', 'AP1M2', 'APC2', 'APC', 'AQP1', 'AQP5', 'AREG', 'ARF6', 'ARHGAP31', 'ARID1A', 'ARL2BP', 'ARMC7', 'ARPC1A', 'ARPC2', 'ARRB2', 'ARVCF', 'AR', 'CLMP', 'ASF1A', 'ATF2', 'ATF3', 'ATM', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BAG3', 'BANP', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL6B', 'BCL9L', 'BCORL1', 'BMI1', 'BMP2', 'BMP4', 'BMP6', 'BMP7', 'BNIP3', 'BRCA1', 'BRCA2', 'BSG', 'BTBD7', 'BTC', 'BTF3', 'ANAPC15', 'CA2', 'CA9', 'CALCA', 'CALR', 'CAPN1', 'CAPNS1', 'CASP3', 'CASP8', 'CASP9', 'CASS4', 'CAV1', 'CBLL1', 'CBL', 'CBX7', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CCR7', 'CD1A', 'CD1B', 'CD1C', 'CD1E', 'CD207', 'CD24', 'CD274', 'CD276', 'CD2AP', 'CD34', 'CD44', 'CD46', 'CD68', 'CD82', 'CDC16', 'CDC23', 'CDC27', 'CDC42', 'CDC6', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH24', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK14', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN3', 'CDX2', 'CEACAM5', 'CFL1', 'CGN', 'CHGA', 'CHL1', 'CLCA2', 'CLDN1', 'CLDN2', 'CLDN3', 'CLDN4', 'CLDN5', 'CLDN7', 'CNTN1', 'COL1A1', 'CORO1C', 'CRB3', 'CREB1', 'CREBBP', 'CRYAB', 'YBX3', 'CSDC2', 'CSE1L', 'CSF2', 'CSNK2A1', 'CSNK2A2', 'CST5', 'CTBP1', 'CTBP2', 'CTCF', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTSL', 'CTTN', 'CXCL12', 'CXCL1', 'CXCR4', 'CYP1B1', 'DAAM1', 'DAB2IP', 'DACH1', 'DAPK1', 'DAP', 'DDR1', 'DDR2', 'DDX3X', 'DICER1', 'DKK1', 'DLC1', 'DLG1', 'DLG5', 'DNM2', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOT1L', 'DPAGT1', 'DPEP1', 'DSP', 'DUOX1', 'DUSP4', 'DVL1', 'DVL2', 'E2F1', 'ECT2', 'EDN1', 'EFEMP1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'EHD1', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'ELAVL1', 'ELF3', 'ENAH', 'ENG', 'EP300', 'EPB41L3', 'EPCAM', 'EPHA10', 'EPHA1', 'EPHA2', 'EPPK1', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ESRP1', 'ESRP2', 'ETS1', 'ETS2', 'EXOC3', 'EXOC4', 'EYA2', 'EZH2', 'EZR', 'F11R', 'F2RL2', 'SUPT20H', 'FBXL5', 'FER', 'FGF10', 'FGF13', 'FGF17', 'FGF19', 'FGF2', 'FGF4', 'FGF5', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FMN1', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC1', 'FOXC2', 'FOXJ2', 'FOXK2', 'FOXL1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXQ1', 'FRMPD2', 'FSCN1', 'FUT4', 'FXYD5', 'FYN', 'FZD1', 'FZD4', 'FZD7', 'FZR1', 'G6PD', 'GAB2', 'GABPA', 'GADD45A', 'GAPDH', 'GAS6', 'GATA1', 'GATA3', 'GATA4', 'GATA6', 'GDNF', 'GFRA1', 'GGT1', 'GJA1', 'GJB1', 'GJB2', 'GKN2', 'GLI1', 'GLI2', 'GMNN', 'GNA12', 'GNA13', 'GNB2L1', 'GNL3', 'GPA33', 'GRB2', 'GRHL2', 'GRHL3', 'GSK3B', 'GSN', 'GSTP1', 'H2AFZ', 'HAVCR2', 'HBEGF', 'HDAC1', 'HDAC2', 'HEPACAM', 'HES1', 'HGF', 'HGS', 'HIF1A', 'HMGA2', 'HNF4A', 'HOXB4', 'HOXD10', 'HPGDS', 'HPGD', 'HRAS', 'HSP90AA1', 'HSPA5', 'ICAM1', 'ID1', 'ID2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP3', 'IL10', 'IL15', 'IL17A', 'IL1B', 'IL24', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IQSEC1', 'IRS1', 'IRS2', 'ITGA5', 'ITGA6', 'ITGAE', 'ITGAM', 'ITGB1', 'ITGB4', 'ITGB7', 'ITPKB', 'IVL', 'JAG1', 'JAK2', 'AJUBA', 'JUN', 'JUP', 'KDM1A', 'KDM6A', 'KDR', 'KEAP1', 'KIFC3', 'KIT', 'KLF4', 'KLF5', 'KLF8', 'KLK3', 'KLK7', 'KLRG1', 'KRAS', 'KRT10', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'KRT9', 'LAMA1', 'LAMB1', 'LAMC2', 'LASP1', 'LATS1', 'LATS2', 'LCN2', 'LEF1', 'LEP', 'LGALS3', 'LGALS4', 'LGALS9', 'LGR5', 'LIF', 'LIMA1', 'LIN28A', 'LIPG', 'LLGL2', 'LMNA', 'LOR', 'LOXL2', 'LOXL3', 'LOX', 'LRP5', 'LRP6', 'LY6K', 'MACC1', 'MACROD1', 'MAD2L2', 'MAGI1', 'MAP2K1', 'MAP2K7', 'MAP4K5', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARK2', 'MARVELD2', 'MCAM', 'MCL1', 'MDM2', 'MED1', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGAT5', 'MGMT', 'MKI67', 'MLH1', 'MLLT4', 'MME', 'MMP11', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP1', 'MMP25', 'MMP27', 'MMP2', 'MMP3', 'MMP7', 'MMP8', 'MMP9', 'MPP5', 'MRAP', 'MSH2', 'MSN', 'MT1G', 'MTA1', 'MTA3', 'MTBP', 'MTDH', 'MTOR', 'MUC1', 'MUC4', 'MYCN', 'MYC', 'MYH6', 'MYO6', 'MYO7A', 'NANOG', 'NCAM1', 'NCOA1', 'NCSTN', 'NDRG1', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEUROG3', 'NF2', 'NFE2L2', 'NFIC', 'NKD2', 'NKX2-1', 'NKX6-1', 'NKX6-2', 'NME1', 'NOG', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NR2F1', 'NRP2', 'NUDT21', 'NUMBL', 'NUMB', 'NUP98', 'NUTF2', 'OTUB1', 'OVOL1', 'OVOL2', 'PARD3', 'PARD6A', 'PAX2', 'PAX5', 'PAX6', 'PAX8', 'PCSK9', 'PDCD4', 'PDGFRB', 'PDPN', 'PEBP1', 'PECAM1', 'PGR', 'PHLPP1', 'PI3', 'PIK3CA', 'PIK3R1', 'PIP5K1A', 'PIP5K1C', 'PIP', 'PIR', 'PITX1', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAUR', 'PLAU', 'PLCD1', 'PLEKHA7', 'PLG', 'PODXL', 'POLR2C', 'POSTN', 'POTEF', 'POU5F1', 'PPARA', 'PPARGC1A', 'PPARG', 'PPL', 'PPP6C', 'PRAME', 'PRDM10', 'PRKAR1A', 'PRKCA', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRKG1', 'PRMT5', 'PROC', 'PROM1', 'PRSS8', 'PSEN1', 'PTCH1', 'PTEN', 'PTF1A', 'PTGS2', 'PTK2', 'PTPN11', 'PTPN14', 'PTPRC', 'PTPRF', 'PTPRJ', 'PTPRM', 'PTPRS', 'PTPRT', 'PTPRU', 'PTRH2', 'PVRL1', 'PVRL2', 'PVR', 'PXN', 'RAB11A', 'RAB25', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RACGAP1', 'RAF1', 'RALA', 'RALBP1', 'RALGDS', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RARB', 'RASSF1', 'RB1', 'RBM4', 'RCOR1', 'RDX', 'REM1', 'RET', 'RHOA', 'RHOB', 'RHOC', 'RHOD', 'RICTOR', 'RND3', 'ROCK1', 'ROCK2', 'RPS6KB1', 'RPTOR', 'RRM2', 'RUNX2', 'RUNX3', 'S100A14', 'S100A4', 'S100A8', 'SATB1', 'SCRIB', 'SDC1', 'SDC4', 'SDHC', 'SELE', 'SELL', 'SELP', 'SEMA3C', 'SEMA3F', 'SENP1', 'SERPINB4', 'SERPINB5', 'SERPINE1', 'SFN', 'SFRP1', 'SFRP2', 'SFTPC', 'SHH', 'SIK1', 'SIN3A', 'SIRT1', 'SIRT2', 'SIRT4', 'SIRT7', 'SIX1', 'SIX2', 'SKIL', 'SKP2', 'SLC2A1', 'SLC39A6', 'SLC6A3', 'SLC9A3R1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SNAI1', 'SNAI2', 'SNAI3', 'SNX16', 'SNX1', 'SOX10', 'SOX17', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPARC', 'SPDEF', 'SPINT1', 'SPP1', 'SPRY1', 'SRCIN1', 'SRC', 'SRXN1', 'ST14', 'ST7L', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STX4', 'STYK1', 'SUCLG2', 'SUMO1', 'SUZ12', 'SYNJ2', 'SYP', 'TACC3', 'TACSTD2', 'TATDN1', 'TBX1', 'TBX3', 'TCF15', 'TCF4', 'TDGF1', 'TERT', 'TET2', 'TFF1', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBI', 'TGFBR1', 'TGFBR2', 'THBS1', 'THEM4', 'THUMPD1', 'THY1', 'TIAM1', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLN1', 'TLR4', 'TMPRSS2', 'TMPRSS4', 'TNFRSF6B', 'TNF', 'TNK2', 'TNS1', 'TP53BP1', 'TP53BP2', 'TP53', 'TRIM21', 'TRIM29', 'TRIM44', 'TRIP10', 'TRPS1', 'TSPYL2', 'TWIST1', 'TWIST2', 'TYRP1', 'T', 'UBE2I', 'UBE2S', 'USP48', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VEZT', 'VHL', 'VIM', 'VIPAS39', 'VPS33B', 'VTN', 'WASL', 'WDFY2', 'WDTC1', 'WIF1', 'WISP1', 'WISP3', 'WNT10A', 'WNT10B', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT9A', 'WNT9B', 'WT1', 'XIAP', 'YAP1', 'YBX1', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 7.243821406194273e-14 NRMSE: 1.153438012514613e-14 MAPE: 8.653877558390523e-11 Pearson Correlation: 0.005337879553679502 Spearman Correlation: 0.06602326712303146 Coefficient of Determination: -15.457916703546502 RMSE: 4.732084445189769 NRMSE: 0.8584747369815625 MAPE: 2204.9227468902773 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.973397933956029, tolerance: 0.06736762282826622 positive)
Pearson Correlation: 0.999982385131223 Spearman Correlation: 0.9999410481613787 Coefficient of Determination: 0.9999626695568636 RMSE: 0.006837007341725737 NRMSE: 0.001088660765855504 MAPE: 5.440629556675935 Pearson Correlation: 0.11194613025724642 Spearman Correlation: 0.07134004164640458 Coefficient of Determination: -3.7370783862823194 RMSE: 2.5387523694916827 NRMSE: 0.4605697125452057 MAPE: 1386.5083753023864 Predictor: RandomForests Pearson Correlation: 0.753766769231701 Spearman Correlation: 0.7342746966759073 Coefficient of Determination: 0.5625251504145368 RMSE: 0.7401351311327643 NRMSE: 0.11785215934727623 MAPE: 216.7168265193337 Pearson Correlation: 0.7698116589512704 Spearman Correlation: 0.5021041435734319 Coefficient of Determination: 0.5286020434695378 RMSE: 0.8008642433908563 NRMSE: 0.14528940230594975 MAPE: 166.4565667458046 Protein: CDH2 Protein Interaction Partners Count: 472 x_train_column_count: 467 x_train columns: ['ABCG2', 'ABL1', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTR3', 'ADAM10', 'ADH1A', 'AFP', 'AHSG', 'AKT1', 'AKT3', 'ALB', 'ALCAM', 'ALDH1A1', 'AMBN', 'AMELX', 'AMOTL1', 'AMTN', 'ANGPT1', 'ANO8', 'ANXA5', 'APC2', 'APC', 'APLP2', 'APOA1', 'APOA2', 'APOA5', 'APOB', 'APOE', 'APOL1', 'APPL1', 'APP', 'ARHGAP32', 'ARMC7', 'ARPC5', 'ARVCF', 'AR', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BCL2L1', 'BDNF', 'BMI1', 'BMP15', 'BMP2', 'BMP4', 'BMP7', 'BNIP2', 'BOC', 'BPIFB2', 'RGCC', 'GSKIP', 'C3', 'C4A', 'CABLES1', 'CADM1', 'CALU', 'CASP3', 'CAV1', 'CBLL1', 'CCNA2', 'CCNB1', 'CCND1', 'CD24', 'CD34', 'CD44', 'CD80', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK4', 'CDK5', 'CDK6', 'CDKN2A', 'CDON', 'CDX2', 'CEBPZ', 'CFL1', 'CHGB', 'CHL1', 'CHRDL1', 'CKAP4', 'CLDN11', 'CLDN3', 'CLDN4', 'CLDN7', 'CORT', 'CP', 'CREBBP', 'CRP', 'CSF1', 'CSK', 'CST3', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTTN', 'CXCL12', 'CXCR4', 'CYLD', 'CYR61', 'DBN1', 'DDR1', 'DDR2', 'DKK1', 'DLG4', 'DLG5', 'DMP1', 'DNAJC3', 'DSP', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EFNB2', 'EFNB3', 'EGFR', 'EGF', 'EHMT2', 'EIF2AK3', 'ENAM', 'ENG', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA4', 'EPHB2', 'EPS8', 'ERBB2', 'ERBB4', 'ESR1', 'ESRP1', 'EXOC4', 'EZH2', 'EZR', 'F11R', 'F5', 'EVA1A', 'FAM20A', 'FAM20C', 'FBN1', 'FER', 'FGA', 'FGF13', 'FGF23', 'FGF2', 'FGFR1', 'FGFR4', 'FGG', 'FN1', 'FOXC2', 'FOXD3', 'FOXO1', 'FOXP4', 'FSTL1', 'FSTL3', 'FUCA2', 'GAA', 'GAPDH', 'GAS6', 'GATA4', 'GFAP', 'GJA10', 'GJA1', 'GJA3', 'GJB6', 'GJC1', 'GJC3', 'GJD3', 'GJD4', 'GLI1', 'GOLM1', 'GPC3', 'GRIA1', 'GRIA2', 'HGF', 'HMGA2', 'HNF4A', 'HRAS', 'HRC', 'HSP90B1', 'HSPA5', 'IARS2', 'IGF1R', 'IGF1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL1B', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'INVS', 'IQGAP1', 'ISL1', 'ITGA6', 'ITGB1', 'ITIH2', 'ITPKB', 'JAG1', 'JAM3', 'JUN', 'JUP', 'KCNA5', 'KDR', 'KIAA2022', 'KIF5B', 'KIT', 'KLF4', 'KNG1', 'KRAS', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT8', 'KTN1', 'L1CAM', 'LAMB1', 'LAMB2', 'LAMC1', 'LEF1', 'LGALS1', 'LRP5', 'LRP6', 'LRRC7', 'LTBP1', 'LTBP3', 'MAP1B', 'MAP2K6', 'MAP2K7', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MATN3', 'MBTPS1', 'MCAM', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEPE', 'MET', 'MFGE8', 'MFI2', 'MGAT4A', 'MIA3', 'MKI67', 'MLLT4', 'MMP14', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MPDZ', 'MPP5', 'MRAP', 'MRPL49', 'MSLN', 'MSN', 'MTHFD1', 'MUC1', 'MUC4', 'MXRA8', 'MYC', 'MYO10', 'MZF1', 'NANOG', 'NCAM1', 'NCSTN', 'NDRG1', 'NENF', 'NES', 'NFASC', 'NGF', 'NKX2-5', 'NLGN1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTUM', 'NRCAM', 'NT5C', 'NT5E', 'NTRK2', 'NUCB1', 'NUMBL', 'NUMB', 'OLFM3', 'P4HB', 'PARD3', 'PAX6', 'PCSK9', 'PC', 'PDGFRB', 'PDIA4', 'PDIA6', 'PECAM1', 'PENK', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PITX2', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PNPLA2', 'POU5F1', 'PPT2', 'PRKCDBP', 'PRKCSH', 'PROC', 'PROM1', 'PRPH', 'PRSS23', 'PSEN1', 'PTEN', 'PTK2', 'PTPN11', 'PTPN1', 'PTPN2', 'PTPRC', 'PTPRS', 'PVRL1', 'PVRL2', 'PVRL3', 'PXN', 'QSOX1', 'RAB11FIP1', 'RAB3D', 'RAB5A', 'RAC1', 'RCN1', 'RELN', 'REM1', 'RHOA', 'RHOB', 'RHOC', 'ROBO1', 'PTBP3', 'RPS6KB1', 'RUNX2', 'S100A14', 'S100A4', 'SARS2', 'SCARB2', 'SCG2', 'SCG3', 'SDC2', 'SEMA3A', 'SENP3', 'SERPINA10', 'SERPINA1', 'SERPINC1', 'SERPIND1', 'SERPINE1', 'SHH', 'SHISA5', 'SIRT7', 'SKP1', 'SLC2A1', 'SLC9A3R1', 'SLIT1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SNAI1', 'SNAI2', 'SNAI3', 'SOX10', 'SOX18', 'SOX1', 'SOX2', 'SOX4', 'SOX9', 'SP7', 'SPAG9', 'SPARCL1', 'SPARC', 'SPP1', 'SPP2', 'SRC', 'ST6GALNAC5', 'STAT3', 'STC2', 'SYP', 'TBX1', 'TCF3', 'TEK', 'TF', 'TGFB1', 'TGFBR1', 'TGM2', 'TGOLN2', 'THY1', 'TIMP1', 'TJP1', 'TJP3', 'TMEM132A', 'TNC', 'TNF', 'TNNT1', 'TP53', 'TRPS1', 'TSC2', 'TWIST1', 'TWIST2', 'USP9X', 'VANGL2', 'VCAM1', 'VCAN', 'VCL', 'VEGFA', 'VGF', 'VIM', 'VTN', 'VWA1', 'WFS1', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7A', 'XIRP1', 'ZBTB16', 'ZEB1', 'ZEB2', 'ZSCAN1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.9408644504639473 Spearman Correlation: 0.9237686573195413 Coefficient of Determination: 0.8852259141468249 RMSE: 0.1285220087925566 NRMSE: 0.04656931980308595 MAPE: 2932.324276169517 Pearson Correlation: 0.06182788683947333 Spearman Correlation: 0.05557425903066123 Coefficient of Determination: -64.84877951646172 RMSE: 2.704370679765985 NRMSE: 1.3950985719563704 MAPE: 1927.0099157709365 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 6.002585392649835, tolerance: 0.007742718020581794 positive)
Pearson Correlation: 0.931577334828779 Spearman Correlation: 0.9154994859726729 Coefficient of Determination: 0.8677247759456378 RMSE: 0.13797323166937148 NRMSE: 0.04999392407760399 MAPE: 2630.353978164566 Pearson Correlation: 0.02087487547367158 Spearman Correlation: 0.07329517824411777 Coefficient of Determination: -52.612950042818944 RMSE: 2.4402100208593733 NRMSE: 1.258826514000337 MAPE: 1767.693228021766 Predictor: RandomForests Pearson Correlation: 0.550213109049189 Spearman Correlation: 0.4891234906858902 Coefficient of Determination: 0.1892807304488393 RMSE: 0.34157873950022544 NRMSE: 0.12376938165817286 MAPE: 1003.40915529767 Pearson Correlation: 0.17163326065502296 Spearman Correlation: 0.1920048878414943 Coefficient of Determination: -0.004505765583519228 RMSE: 0.33401699974633664 NRMSE: 0.1723087159766088 MAPE: 181.21785458783677 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.5168390583924106 Spearman Correlation: 0.5403178575375212 Coefficient of Determination: 0.2671226122799535 RMSE: 0.17627602933379624 NRMSE: 0.12562968009877576 MAPE: 434.55039857009865 Pearson Correlation: 0.40637234139747885 Spearman Correlation: 0.40395266773899924 Coefficient of Determination: -0.3251363019352176 RMSE: 0.23920368452191157 NRMSE: 0.21290179657325198 MAPE: 926.9153647229047 Predictor: ElasticNet Pearson Correlation: 0.5143863073028511 Spearman Correlation: 0.5380693649707703 Coefficient of Determination: 0.2645859682308932 RMSE: 0.17658083017538515 NRMSE: 0.12584690777497978 MAPE: 437.076637830486 Pearson Correlation: 0.4769395563720625 Spearman Correlation: 0.43205276873776494 Coefficient of Determination: -0.04374258463174607 RMSE: 0.21229232364861633 NRMSE: 0.18894950215267484 MAPE: 876.9234503548818 Predictor: RandomForests Pearson Correlation: 0.5492470972367409 Spearman Correlation: 0.5433468367086957 Coefficient of Determination: 0.2574319733918553 RMSE: 0.17743762712931946 NRMSE: 0.12645753604723653 MAPE: 435.61382629898475 Pearson Correlation: 0.450451981096876 Spearman Correlation: 0.3980673075724137 Coefficient of Determination: 0.12512572123777044 RMSE: 0.194361576653241 NRMSE: 0.1729903489446223 MAPE: 635.6356775073434 Protein: PTEN Protein Interaction Partners Count: 884 x_train_column_count: 876 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ABTB1', 'ACTB', 'ACTG1', 'ADM', 'AEBP1', 'AFP', 'AKT1S1', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'AMHR2', 'ANXA2', 'ANXA5', 'APAF1', 'APC', 'ARAF', 'AREG', 'ARHGAP21', 'ARID1A', 'ARID2', 'ARL2BP', 'AR', 'ATF3', 'ATG12', 'ATG5', 'ATG7', 'ATM', 'ATRX', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'AXL', 'BAD', 'BAG5', 'BARD1', 'BAX', 'BBC3', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BIRC3', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BNIP3', 'BRAF', 'BRCA1', 'BRCA2', 'BRD4', 'BTG2', 'BTK', 'SPRTN', 'CLHC1', 'CA9', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBL', 'CBX7', 'CCL2', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD24', 'CD274', 'CD34', 'CD44', 'CD79A', 'CD79B', 'CDC14A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC7', 'CDH17', 'CDH1', 'CDH2', 'CDIPT', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CENPC', 'CFL1', 'CFLAR', 'CFTR', 'CHD1', 'CHD8', 'CHEK1', 'CHEK2', 'CHKA', 'CHORDC1', 'CHUK', 'CLTCL1', 'CLTC', 'CNOT6L', 'CREB1', 'CREBBP', 'CRP', 'CSF1R', 'CSF1', 'CSK', 'CSN2', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTGF', 'CTLA4', 'CTNNB1', 'CUL1', 'CUL3', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'DAPK1', 'DAXX', 'DBN1', 'DCAF13', 'DDIT4', 'DDR2', 'DECR1', 'DEPTOR', 'DGCR8', 'DICER1', 'DLC1', 'DLG1', 'DLG4', 'DNM1L', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOLPP1', 'DUSP1', 'DUSP6', 'DUT', 'DVL1', 'DYRK1A', 'E2F1', 'E2F2', 'E2F3', 'ECSCR', 'EGFR', 'EGF', 'EGR1', 'EIF2AK2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4EBP2', 'EIF4E', 'EIF4G1', 'EML4', 'ENDOG', 'EP300', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA3', 'EPHA4', 'EPHA5', 'EPHA7', 'EPHB1', 'EPHB2', 'EPHB3', 'EPHB4', 'ERBB2', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ESR1', 'ETS1', 'ETS2', 'ETV1', 'ETV6', 'EYA2', 'EZH2', 'EZR', 'FABP4', 'FASLG', 'FASN', 'FBXW7', 'FCGR1B', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FIG4', 'FKBP1A', 'FLCN', 'FLT1', 'FLT3', 'FLT4', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXG1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FOXP3', 'FRK', 'FYN', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GCK', 'GDF10', 'GDF2', 'GFAP', 'GJA1', 'GLI1', 'GNA11', 'GNAQ', 'GNAS', 'GNRHR', 'GRASP', 'GRB2', 'GRPR', 'GSK3A', 'GSK3B', 'GSTP1', 'H1F0', 'H2AFX', 'HAVCR2', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HES1', 'HGF', 'HIF1A', 'HIST1H2BA', 'HK1', 'HK2', 'HMGA2', 'HNF4A', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA1A', 'HSPA1B', 'HSPA2', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'ID1', 'ID4', 'IDH1', 'IDH2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL17A', 'IL21', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INPP4A', 'INPP4B', 'INPP5A', 'INPP5B', 'INPP5D', 'INPP5E', 'INPP5F', 'INPP5J', 'INPP5K', 'INPPL1', 'INSRR', 'INSR', 'INS', 'IPMK', 'IPO11', 'IQGAP1', 'IRAK1', 'IRS1', 'IRS2', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'ITPR3', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUN', 'KAT2B', 'KDM5B', 'KDM5C', 'KDM6A', 'KDR', 'KEAP1', 'ATG13', 'KIF11', 'KLLN', 'KITLG', 'KIT', 'KLF17', 'KLF2', 'KLF4', 'KLK3', 'KPNA1', 'KPNA2', 'KPNA5', 'KPNA6', 'KPNA7', 'KRAS', 'KRT14', 'KRT5', 'KRT8', 'LASP1', 'LATS1', 'LATS2', 'LCK', 'LDHA', 'LEF1', 'LEP', 'LGALS3', 'LIG4', 'LOX', 'LRIG1', 'LRP1B', 'LRRK2', 'LYN', 'LYPD1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAN2C1', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K3', 'MAP2K4', 'MAP2K7', 'MAP3K1', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK4', 'MAPK6', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAP1', 'MAPT', 'MARCH2', 'MARCH3', 'MAST1', 'MAST2', 'MAST3', 'MAST4', 'MATK', 'MCL1', 'MCM2', 'MCM7', 'MCRS1', 'MDK', 'MDM2', 'MDM4', 'MECOM', 'MECP2', 'MED12', 'MEN1', 'MET', 'MGMT', 'MINPP1', 'MITF', 'MKI67', 'MKRN1', 'MLH1', 'MLH3', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT1', 'MLST8', 'MME', 'MMP2', 'MMP9', 'MOV10', 'MRAP', 'MRE11A', 'MSH2', 'MSH6', 'MTDH', 'MTMR2', 'MTOR', 'MTSS1', 'MUTYH', 'MVP', 'MYCN', 'MYC', 'MYLK', 'MYOCD', 'NANOG', 'NCKAP1', 'NCOA3', 'NCOR2', 'NDFIP1', 'NDFIP2', 'NDRG1', 'NDRG2', 'NEDD4L', 'NEDD4', 'NES', 'NF1', 'NF2', 'NFATC1', 'NFATC4', 'NFE2L2', 'NFKBIA', 'NGFR', 'NKX3-1', 'NLGN3', 'NLGN4X', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR1H4', 'NR3C2', 'NRAS', 'NRP2', 'NTRK1', 'NTRK2', 'NUMB', 'OCRL', 'OLIG2', 'OTUD3', 'PALB2', 'PARD3', 'PARD6A', 'PARD6B', 'PARD6G', 'PARK2', 'PARK7', 'PARP1', 'PAX8', 'PBK', 'PBRM1', 'PCGF2', 'PCSK9', 'PDCD1', 'PDCD4', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PDK1', 'PDK2', 'PDPK1', 'PDZK1', 'PECAM1', 'PGM3', 'PGR', 'PHF6', 'PHLPP1', 'PHLPP2', 'PI3', 'PI4K2A', 'PI4K2B', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIK3R5', 'PIKFYVE', 'PINK1', 'PIP4K2A', 'PIP4K2B', 'PIP4K2C', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PIP5KL1', 'PKM', 'PLCB1', 'PLCB2', 'PLCB3', 'PLCB4', 'PLCD1', 'PLCD3', 'PLCD4', 'PLCE1', 'PLCG1', 'PLCG2', 'PLCH1', 'PLCH2', 'PLCZ1', 'PLEKHA1', 'PLEK', 'PLK1', 'PLK2', 'PLK3', 'BPIFA1', 'PMAIP1', 'PML', 'PMPCA', 'PMS1', 'PMS2', 'POLE', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPM1D', 'PPP2R1A', 'PPP2R4', 'PPP2R5A', 'PPP2R5E', 'PPP3CA', 'PPP6C', 'PRDX1', 'PREX2', 'PRKAA1', 'PRKAA2', 'PRKCI', 'PRKCZ', 'PRKDC', 'PRMT5', 'PROM1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTER', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPMT1', 'PTPN11', 'PTPN12', 'PTPN13', 'PTPN1', 'PTPRC', 'PTPRD', 'PTS', 'PXN', 'RAB7A', 'RAC1', 'RAC2', 'RAD51C', 'RAD51D', 'RAD51', 'RAD52', 'RAF1', 'RASA1', 'RASSF1', 'RB1CC1', 'RB1', 'RBL1', 'RBL2', 'RBM38', 'RBFOX2', 'RCN1', 'RECK', 'RELA', 'REL', 'REM1', 'RETN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'DROSHA', 'RNF146', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KB1', 'RPS6KB2', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'RRM1', 'RSL1D1', 'RUNX3', 'RWDD3', 'SACM1L', 'SALL4', 'SCAI', 'SCGB1D4', 'SCRIB', 'SDHB', 'SDHC', 'SERPINA1', 'SERPINA4', 'SERPINB5', 'SESN1', 'SESN2', 'SETD2', 'SGK1', 'SGK2', 'SGK3', 'SHANK2', 'SHARPIN', 'SHC1', 'SHFM1', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT5', 'SIRT6', 'SIRT7', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC2A4', 'SLC34A2', 'SLC9A3R1', 'SLC9A3R2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNCA', 'SNX27', 'SOCS1', 'SOCS3', 'SOD2', 'SOS1', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPOP', 'SPRY1', 'SPRY2', 'SRBD1', 'SRC', 'SREBF1', 'SRF', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STMN1', 'STUB1', 'STX16', 'SUCLG2', 'SUMO1', 'SYK', 'SYNJ1', 'SYNJ2', 'TACSTD2', 'TBX1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TEP1', 'TERT', 'TET1', 'TGFB1', 'TGFBR1', 'TGFBR2', 'TGM2', 'THBS1', 'TIMP1', 'TIMP3', 'TJP1', 'TLR4', 'TMEM55A', 'TMEM55B', 'TMPRSS2', 'TNFRSF10B', 'TNFSF10', 'TNF', 'TNKS2', 'TNKS', 'TNPO2', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TPM1', 'TRAF6', 'TRIM27', 'TRIM29', 'TSC1', 'TSC2', 'TTN', 'TUT1', 'TWIST1', 'TWSG1', 'TXN', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2E1', 'UBE2I', 'UBE2L3', 'UBE3A', 'ULK1', 'ULK2', 'USP10', 'USP13', 'USP18', 'USP28', 'USP7', 'USP8', 'UTF1', 'UVRAG', 'VCL', 'VDR', 'VEGFA', 'VHL', 'WDR18', 'WDTC1', 'WEE1', 'WIPI1', 'WIPI2', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT9A', 'WNT9B', 'WT1', 'WWP1', 'WWP2', 'XIAP', 'XPO1', 'XPO5', 'YAP1', 'YES1', 'YWHAB', 'YWHAZ', 'YY1', 'ZEB1', 'ZEB2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.521472388843537e-14 NRMSE: 6.8118856175401135e-15 MAPE: 3.5936001598253014e-11 Pearson Correlation: 0.06114067959069788 Spearman Correlation: 0.03686579633162509 Coefficient of Determination: -2.3326552753769865 RMSE: 1.3610824070975496 NRMSE: 0.2128187643026424 MAPE: 3315.4764878460396 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.4564891978452113, tolerance: 0.016979184196949017 positive)
Pearson Correlation: 0.9999700930024562 Spearman Correlation: 0.9999183150994266 Coefficient of Determination: 0.9999340768904383 RMSE: 0.004561273504917791 NRMSE: 0.0008823261964016154 MAPE: 4.551411761633922 Pearson Correlation: 0.07712496900509407 Spearman Correlation: 0.026885622015237098 Coefficient of Determination: -2.3952394619722104 RMSE: 1.3738029000517264 NRMSE: 0.2148077398251468 MAPE: 1975.7907436226926 Predictor: RandomForests Pearson Correlation: 0.608299597331999 Spearman Correlation: 0.56824097230616 Coefficient of Determination: 0.2836381712611429 RMSE: 0.4754813534787179 NRMSE: 0.0919764301839055 MAPE: 168.30918216911732 Pearson Correlation: 0.43538911669612135 Spearman Correlation: 0.4725719772066984 Coefficient of Determination: 0.14202527403410892 RMSE: 0.6905998365003235 NRMSE: 0.10798214940197381 MAPE: 148.10205154417665 Protein: BRCA2 Protein Interaction Partners Count: 361 x_train_column_count: 351 x_train columns: ['ABL1', 'ACHE', 'ADRB1', 'ADRB2', 'AKT1', 'ALK', 'APEX1', 'ARID1A', 'ARPC1A', 'AR', 'ATAD5', 'ATM', 'ATRIP', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'B3GALTL', 'BACH1', 'BARD1', 'BCCIP', 'BCHE', 'BDNF', 'BECN1', 'BIRC5', 'BLM', 'BMI1', 'BRCA1', 'BRCC3', 'BRE', 'BRIP1', 'SLX4', 'BUB1B', 'BUB1', 'BUB3', 'SFR1', 'RHNO1', 'RMI2', 'BABAM1', 'MMS22L', 'CASC1', 'CASC5', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCNE1', 'CDC25A', 'CDC25C', 'CDC45', 'CDC6', 'CDH1', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CENPE', 'CENPF', 'CEP55', 'CHEK1', 'CHEK2', 'CHRNA1', 'CLSPN', 'CNTROB', 'CREM', 'CSMD3', 'CTNNB1', 'CYP19A1', 'DMC1', 'DNA2', 'DSN1', 'DYNC1LI2', 'EGFR', 'EGF', 'ELAC2', 'EME1', 'EME2', 'ENAM', 'EPCAM', 'ERBB2', 'ERBB3', 'ERCC1', 'ERCC2', 'ERCC4', 'ERCC5', 'ERCC6', 'ERCC8', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM175A', 'FANCA', 'FANCB', 'FANCC', 'FANCD2', 'FANCE', 'FANCF', 'FANCG', 'FANCI', 'FANCL', 'FANCM', 'FBN1', 'FBXO18', 'FBXW7', 'FEN1', 'FGFR2', 'FHIT', 'FLNA', 'FOXM1', 'GAPDH', 'GEN1', 'SLX1B', 'H2AFX', 'HELQ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HMG20A', 'HMG20B', 'HMMR', 'HNRNPC', 'HOXB13', 'HRAS', 'HUS1', 'ITPKB', 'KAT2B', 'KAT5', 'KEAP1', 'SPIDR', 'KIF23', 'KIF4A', 'KIT', 'KLK3', 'KRAS', 'KRT5', 'LIG1', 'LIG3', 'LIG4', 'LIMD1', 'LSP1', 'MAD2L2', 'MAGED1', 'MAMSTR', 'MAP2K2', 'MAP3K1', 'MCM10', 'MCPH1', 'MDC1', 'MDM2', 'MDM4', 'MEN1', 'MGMT', 'MKI67', 'MLH1', 'MLH3', 'KMT2C', 'MND1', 'MORF4L1', 'MRE11A', 'MRPL36', 'MSH2', 'MSH3', 'MSH4', 'MSH5', 'MSH6', 'MTA2', 'FAN1', 'MUC1', 'MUS81', 'MUTYH', 'MYC', 'NBN', 'NCAPG', 'NEDD4', 'NF1', 'NHEJ1', 'NNT', 'NOTCH1', 'NSL1', 'NSMCE4A', 'OBFC1', 'OGG1', 'PALB2', 'PARG', 'PARP1', 'PARP2', 'PARP3', 'PAXIP1', 'PCNA', 'PDLIM7', 'PDS5A', 'PDS5B', 'PGR', 'PIK3CA', 'PLCB4', 'PLEC', 'PLEKHH1', 'PLK1', 'PMS1', 'PMS2', 'PNOC', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'POLN', 'POLQ', 'PRDM9', 'PRKDC', 'PRSS1', 'PSMC3IP', 'PSMD3', 'PSMD6', 'PTEN', 'RAD17', 'RAD18', 'RAD1', 'RAD21', 'RAD23B', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD52', 'RAD54B', 'RAD54L', 'RAD9A', 'RAD9B', 'RAG2', 'RASSF1', 'RBBP8', 'RBMX', 'RECQL4', 'RECQL5', 'RECQL', 'RET', 'REV1', 'REV3L', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RNF168', 'RNF8', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SKP2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCAL1', 'SMARCB1', 'SMC1A', 'SMC2', 'SMC3', 'SMC4', 'SMC5', 'SMC6', 'SMUG1', 'SNAI2', 'SP1', 'SPO11', 'STAT5A', 'STK11', 'STRA13', 'SUV39H1', 'SYCP3', 'TBCE', 'TDP1', 'TERT', 'TEX15', 'TMPRSS2', 'TNS1', 'TOP1', 'TOP2A', 'TOP3A', 'TOP3B', 'TOPBP1', 'TOX3', 'TP53BP1', 'TP53', 'TPX2', 'TRIP12', 'PRSS58', 'TTK', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2D1', 'UBE2E2', 'UBE2E3', 'UBE2N', 'UBE2T', 'UIMC1', 'USF1', 'USP11', 'USP15', 'USP1', 'USP21', 'USP4', 'UVRAG', 'VEGFA', 'VWF', 'WDR48', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WTIP', 'XPA', 'XPO1', 'XRCC1', 'XRCC2', 'XRCC3', 'XRCC4', 'XRCC5', 'XRCC6', 'ZFYVE26', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.8392616558044157 Spearman Correlation: 0.803151973960087 Coefficient of Determination: 0.7043601269035696 RMSE: 0.10428549787886415 NRMSE: 0.06718344202213829 MAPE: 206.30477906557215 Pearson Correlation: 0.10309218646365005 Spearman Correlation: 0.03354405915285727 Coefficient of Determination: -2.4988092848982024 RMSE: 0.38926703757762654 NRMSE: 0.378182508260511 MAPE: 1722.892010676053 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 3.363380961735279, tolerance: 0.001979097117455079 positive)
Pearson Correlation: 0.8255991240555551 Spearman Correlation: 0.785883553464527 Coefficient of Determination: 0.6814202702064829 RMSE: 0.10825587760290711 NRMSE: 0.06974126436006256 MAPE: 195.41756907560122 Pearson Correlation: 0.10813140326968133 Spearman Correlation: 0.07916058803725733 Coefficient of Determination: -1.8285098695292863 RMSE: 0.3499986297348915 NRMSE: 0.3400322835053497 MAPE: 1469.3813178537316 Predictor: RandomForests Pearson Correlation: 0.5689664804559879 Spearman Correlation: 0.4743332344252423 Coefficient of Determination: 0.18695680708568396 RMSE: 0.17294150113636997 NRMSE: 0.11141343284675148 MAPE: 143.06895102424457 Pearson Correlation: 0.202703572915966 Spearman Correlation: 0.2607339243631467 Coefficient of Determination: 0.03292509222128148 RMSE: 0.20465273469918463 NRMSE: 0.1988251689959144 MAPE: 206.63029933075143 Protein: CDKN2A Protein Interaction Partners Count: 612 x_train_column_count: 605 x_train columns: ['ABCC1', 'ABL1', 'ACAP1', 'ACAP2', 'ACP5', 'ACTA1', 'ACTB', 'ACTG1', 'ADAMTS9', 'ADAP1', 'AFP', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD12', 'ANXA5', 'AP3D1', 'AP3S1', 'AP3S2', 'APAF1', 'APBA1', 'APBA2', 'ARAP1', 'ARAP2', 'ARF1', 'ARF3', 'ARF4', 'ARF5', 'ARF6', 'ARFGAP1', 'ARFGAP3', 'ARFIP2', 'ARFRP1', 'ARID1A', 'ARID2', 'ARID5B', 'ARL10', 'ARL1', 'ARL2', 'ARL3', 'ARL4A', 'ARL5A', 'AR', 'ASAP1', 'ATM', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'AXIN1', 'BAP1', 'BCL2L11', 'BCL2L1', 'BCL6', 'BECN1', 'BIRC5', 'BMI1', 'BRAF', 'BRCA1', 'BRCA2', 'BUB1B', 'RGCC', 'C1QBP', 'RABL6', 'CACNA1G', 'CADM1', 'CAMK1D', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNL1', 'CD274', 'CD34', 'CD44', 'CDC123', 'CDC20', 'CDC25A', 'CDC25C', 'CDC42', 'CDC45', 'CDC5L', 'CDC6', 'CDC7', 'CDH13', 'CDH17', 'CDH1', 'CDH2', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5RAP3', 'CDK6', 'CDK7', 'CDKAL1', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDX2', 'CEACAM5', 'CEBPB', 'CEBPE', 'CHEK1', 'CHEK2', 'CHFR', 'CHKA', 'COMMD1', 'CRABP1', 'CREBBP', 'CSF1R', 'CSF1', 'CSF2', 'CTBP1', 'CTBP2', 'CTCF', 'CTLA4', 'CTNNB1', 'CTSK', 'CUL1', 'CUL3', 'CXCR4', 'CYCS', 'CYLD', 'CYTH1', 'CYTH2', 'CYTH3', 'DAB2IP', 'DAP', 'DAXX', 'DICER1', 'DIRAS3', 'DLEC1', 'DMTF1', 'DNAH3', 'DNMT1', 'DNMT3A', 'DNMT3B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EBF1', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EP300', 'EPCAM', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ETS1', 'ETV6', 'EWSR1', 'EZH1', 'EZH2', 'FAT1', 'FBXW7', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FKBP2', 'FLT3', 'FMN2', 'FN1', 'FOS', 'FOXA1', 'FOXM1', 'FOXN2', 'FOXO1', 'FOXO3', 'FTO', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GATA4', 'GATA5', 'GBF1', 'GDF15', 'GGA1', 'GGA2', 'GGA3', 'GIT1', 'GIT2', 'GLI1', 'GLTSCR2', 'GMNN', 'GNA11', 'GNAQ', 'GNAS', 'GNL3', 'GOLPH3', 'GP5', 'GSPT1', 'GSTP1', 'H2AFX', 'H2AFZ', 'H3F3A', 'H3F3B', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC9', 'HELLS', 'HGF', 'HHEX', 'HIC1', 'HIF1A', 'HIST1H2BA', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AA3', 'HIST2H2AC', 'HIST2H4A', 'HIST4H4', 'HLTF', 'HMGA2', 'HNF4A', 'HNRNPD', 'HOPX', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA4', 'HSPA9', 'HUWE1', 'ID1', 'IDH1', 'IDH2', 'IGF1R', 'IGF1', 'IGF2BP2', 'IGF2R', 'IGF2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING4', 'INS', 'IQSEC1', 'IRS1', 'ISOC2', 'ITGAM', 'JAK1', 'JAK2', 'JAK3', 'JAZF1', 'JUNB', 'JUN', 'KAT2B', 'KAT5', 'KCNJ11', 'KCNQ1', 'KDM1A', 'KDM2B', 'KDM6A', 'KDM6B', 'KDR', 'KEAP1', 'KIAA1549', 'KIT', 'KLF4', 'KRAS', 'KRT19', 'KRT20', 'KRT5', 'KRT7', 'LATS2', 'LOX', 'LRRK2', 'MACROD2', 'MAF', 'MAP2K1', 'MAP2K4', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MAX', 'MC1R', 'MCL1', 'MCM10', 'MCM2', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEN1', 'MEOX1', 'MEOX2', 'MET', 'MGMT', 'MITF', 'MKRN1', 'MLANA', 'MLH1', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT3', 'MME', 'MMP2', 'MMP7', 'MMP9', 'MOV10', 'MRAS', 'MSH2', 'MSH6', 'MTA1', 'MTAP', 'MTHFR', 'MTNR1B', 'MTOR', 'MUC1', 'MYBL2', 'MYCL', 'MYCN', 'MYC', 'MYOD1', 'KAT6A', 'NANOG', 'NCAM1', 'NCL', 'NCOR1', 'NES', 'NEUROG1', 'NF1', 'NF2', 'NFATC1', 'NFE2L2', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NPM1', 'NRAS', 'NSUN2', 'ORC4', 'ORC5', 'OSBP2', 'P2RY8', 'PA2G4', 'PALB2', 'PARP1', 'PAX3', 'PAX5', 'PAX8', 'PBRM1', 'PCGF2', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PEX19', 'PGR', 'PHLDB1', 'PI3', 'PIAS2', 'PIGF', 'PIK3CA', 'PIK3R1', 'PIP4K2A', 'PLEKHA3', 'PLEKHA8', 'PLEK', 'PLK1', 'PMAIP1', 'PML', 'PMS2', 'POTEF', 'POU5F1', 'PPARA', 'PPARG', 'PPM1D', 'PPP1R9B', 'PPP3CA', 'PRDM2', 'PRMT6', 'PROM1', 'PRSS1', 'PSMC3', 'PSMD10', 'PSME3', 'PTCH1', 'PTEN', 'PTER', 'PTF1A', 'PTGS2', 'PTPN11', 'PTPRC', 'PTPRD', 'PXN', 'RAB11A', 'RAB5A', 'RABEP1', 'RABGEF1', 'RAC2', 'RAD51', 'RAF1', 'RAP2B', 'RARB', 'RASSF1', 'RASSF2', 'RB1', 'RBL1', 'RBL2', 'RCC1', 'RELA', 'RELB', 'REL', 'RET', 'RHOA', 'DROSHA', 'RNF2', 'RNF43', 'ROS1', 'RPL11', 'RPRM', 'RPS27A', 'RPS6KB1', 'RRAS2', 'RRAS', 'RTEL1', 'RUNX2', 'RUNX3', 'SDHC', 'SENP1', 'SENP3', 'SERPINE1', 'SERTAD1', 'SETD2', 'SFN', 'SFRP1', 'SFRP2', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SIX2', 'SKP2', 'SLC30A8', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SNAI1', 'SNAI2', 'SNCA', 'SOCS1', 'SOX2', 'SP1', 'SPEN', 'SRC', 'STAT1', 'STAT3', 'STK11', 'STK25', 'STK33', 'STMN1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUV39H1', 'SUZ12', 'SYNE1', 'SYP', 'TBL1XR1', 'TBRG1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TERT', 'TET2', 'TFDP1', 'TFPI2', 'TGFBR2', 'THADA', 'THBS1', 'TIMP3', 'TMCO1', 'TMEM115', 'TNFRSF10B', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TRADD', 'TRIM28', 'TRIP12', 'PRSS58', 'TSC2', 'TSPAN8', 'TTF1', 'TWIST1', 'TWSG1', 'TYR', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2I', 'UBE3A', 'UCHL1', 'USP7', 'UTF1', 'VEGFA', 'VHL', 'WDTC1', 'WEE1', 'WFS1', 'WHSC1', 'WIF1', 'WRN', 'WT1', 'WWOX', 'XRCC1', 'YY1', 'ZBTB17', 'ZBTB7A', 'ZEB1', 'ZFP91', 'ZNF148', 'ZNF217', 'ZNF227', 'ZNF410', 'ZNF420', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 8.725955902836064e-14 NRMSE: 1.97263612588133e-14 MAPE: 6.490722707927105e-11 Pearson Correlation: 0.3051350798756952 Spearman Correlation: 0.24306786867666683 Coefficient of Determination: -13.363765471162095 RMSE: 2.3902318488972836 NRMSE: 0.720166269628588 MAPE: 915.1079270957451 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 1.4622331240217268, tolerance: 0.024436786734185888 positive)
Pearson Correlation: 0.998366831486105 Spearman Correlation: 0.9974778437890683 Coefficient of Determination: 0.9967088098623494 RMSE: 0.03866405482619053 NRMSE: 0.00874060242481983 MAPE: 23.98408547936439 Pearson Correlation: 0.17214450052651217 Spearman Correlation: 0.12880709235776008 Coefficient of Determination: -6.5154893026709475 RMSE: 1.7289582515708966 NRMSE: 0.5209274635645967 MAPE: 929.6917015373613 Predictor: RandomForests Pearson Correlation: 0.6873680498249779 Spearman Correlation: 0.6297196272054022 Coefficient of Determination: 0.4621442326374321 RMSE: 0.4942695162171567 NRMSE: 0.11173720271666251 MAPE: 178.0013051338801 Pearson Correlation: 0.6006430571555817 Spearman Correlation: 0.5016203464141189 Coefficient of Determination: 0.34018642908131047 RMSE: 0.5122907309142629 NRMSE: 0.15435092826582192 MAPE: 134.0557593536924 Protein: TP53 Protein Interaction Partners Count: 1000 x_train_column_count: 991 x_train columns: ['ABCB1', 'ABCC1', 'ABL1', 'ACTB', 'ACTL6A', 'ADAM17', 'AFP', 'AGT', 'AICDA', 'AIFM2', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD2', 'ANXA1', 'ANXA2', 'ANXA5', 'APAF1', 'APBB1', 'APC', 'APEX1', 'APOBEC3B', 'APP', 'ARID1A', 'ARID3A', 'AR', 'ASF1A', 'ASXL1', 'ATF2', 'ATF3', 'ATG7', 'ATM', 'ATN1', 'ATRIP', 'ATRX', 'ATR', 'ATXN3', 'AURKA', 'AURKB', 'AXIN1', 'AXL', 'BACE1', 'BAG1', 'BAG2', 'BAIAP2L1', 'BAK1', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2A1', 'BCL2L11', 'BCL2L12', 'BCL2L14', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BID', 'BIRC3', 'BIRC5', 'BIRC6', 'BLM', 'BMF', 'BMI1', 'BMX', 'BNIP3L', 'BNIP3', 'BRCA1', 'BRCA2', 'BRCC3', 'BRD1', 'BRD4', 'BRD7', 'BRE', 'BRIP1', 'BRPF1', 'BRPF3', 'BTG2', 'BTK', 'BUB1B', 'BUB1', 'RHNO1', 'RGCC', 'RMI2', 'CNOT11', 'SETD9', 'CA9', 'CABIN1', 'CABLES1', 'CAPN1', 'CARM1', 'CASP10', 'CASP1', 'CASP2', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBX2', 'CBX4', 'CBX6', 'CBX8', 'CCDC106', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNG2', 'CCNH', 'CCNK', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CD24', 'CD274', 'CD34', 'CD40LG', 'CD40', 'CD44', 'CD82', 'CDC20', 'CDC25A', 'CDC25C', 'CDH17', 'CDH1', 'CDK12', 'CDK13', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CEACAM5', 'CEBPB', 'CENPJ', 'CFL1', 'CFLAR', 'CHD3', 'CHD4', 'CHD8', 'CHEK1', 'CHEK2', 'CHUK', 'CISH', 'CITED2', 'CLSPN', 'CLU', 'CNOT10', 'CNOT1', 'CNOT2', 'CNOT3', 'CNOT4', 'CNOT6L', 'CNOT6', 'CNOT7', 'CNOT8', 'COPS5', 'CREB1', 'CREBBP', 'CRYAB', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK1G1', 'CSNK1G2', 'CSNK1G3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTCF', 'CTGF', 'CTNNB1', 'CUL4A', 'CUL7', 'CUL9', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP1A1', 'DACH1', 'DAPK1', 'DAP', 'DAXX', 'DDB1', 'DDB2', 'DDIT4', 'DDX17', 'DDX3X', 'DDX5', 'DECR1', 'DGCR8', 'DHCR24', 'DHFR', 'DIABLO', 'DICER1', 'DKK1', 'DMTF1', 'DNA2', 'DNAJA3', 'DNAJB1', 'DNMT1', 'DNMT3A', 'DNTT', 'DPYD', 'DRAM1', 'DTL', 'DUSP1', 'DUSP2', 'DYRK1A', 'DYRK2', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EEF1A1', 'EEF1A2', 'EGFR', 'EGF', 'EGR1', 'EHMT1', 'EHMT2', 'EI24', 'EIF2AK2', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4EBP1', 'ELANE', 'ELAVL1', 'ELL3', 'ELL', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHA3', 'EPHB2', 'ERBB2', 'ERBB4', 'ERCC1', 'ERCC2', 'ERCC3', 'ERCC6', 'ESR1', 'ETS1', 'ETS2', 'EWSR1', 'EXO1', 'EZH2', 'F2', 'FADD', 'AMER1', 'FAM175B', 'FANCC', 'FANCD2', 'FASLG', 'FAS', 'FBL', 'FBXO11', 'FBXO4', 'FBXW7', 'FGF1', 'FGF2', 'FGFR3', 'FHIT', 'FHL2', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FSCN1', 'FUT4', 'FZR1', 'G3BP1', 'G6PD', 'GADD45A', 'GADD45B', 'GADD45G', 'GAPDH', 'GATAD2A', 'GATAD2B', 'GDF15', 'GFI1', 'GLS2', 'GLTSCR2', 'GNL3', 'GRAMD4', 'GRB10', 'GRB14', 'GSK3B', 'GSTP1', 'GTF2H1', 'GTSE1', 'H1F0', 'H2AFX', 'HAMP', 'HCK', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC5', 'HDAC7', 'HDAC8', 'HDAC9', 'HERC5', 'HIC1', 'HIF1A', 'HIPK1', 'HIPK2', 'HIPK3', 'HIPK4', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HK2', 'HMGA1', 'HMGA2', 'HMGB1', 'HMGB2', 'HMMR', 'HMOX1', 'HNF4A', 'HNRNPK', 'HNRNPL', 'HOXA5', 'HPGDS', 'HRAS', 'HSF1', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA1A', 'HSPA1B', 'HSPA1L', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'HSPB1', 'HSPB2', 'HTT', 'HUS1', 'HUWE1', 'ICAM1', 'ID2', 'ID4', 'IDH1', 'IDH2', 'IFI16', 'IFNAR1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IGFBP7', 'IKBKB', 'IL17A', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING2', 'ING3', 'ING4', 'ING5', 'INSIG1', 'INS', 'IRF1', 'ISG15', 'ITPKB', 'JAG1', 'JAK2', 'JMY', 'JUN', 'KAT2A', 'KAT2B', 'KAT5', 'KDM1A', 'KDM6A', 'KDM6B', 'KDR', 'KHDRBS1', 'CCAR2', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KPNA2', 'KRAS', 'KRT14', 'KRT17', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'L3MBTL1', 'LAMA4', 'LEP', 'LGALS7B', 'LGALS7', 'LIF', 'LIG4', 'LIN28A', 'PIDD1', 'LRRK2', 'LYN', 'MAF1', 'MAF', 'MAGEA2', 'MAP1LC3B', 'MAP2K1', 'MAP2K3', 'MAP2K7', 'MAP3K1', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MBD3', 'MCL1', 'MCM7', 'MDC1', 'MDH1', 'MDM2', 'MDM4', 'MEAF6', 'MECOM', 'MELK', 'MET', 'MGMT', 'MIF', 'MKI67', 'MKRN1', 'MLH1', 'KMT2D', 'KMT2C', 'MMP13', 'MMP1', 'MMP2', 'MMP9', 'MOV10', 'MRE11A', 'MSH2', 'MSH6', 'MSX1', 'MT1A', 'MT2A', 'MTA1', 'MTA2', 'MTA3', 'MTOR', 'MUC1', 'MUTYH', 'MYBBP1A', 'MYB', 'MYCN', 'MYC', 'MYOCD', 'KAT8', 'KAT6A', 'NANOG', 'NBN', 'NCL', 'NCOA3', 'NCOR1', 'NCOR2', 'NDN', 'NDRG1', 'NEDD8', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFE2L2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NFKBIB', 'NFYA', 'NFYB', 'NFYC', 'NGFR', 'NKX2-1', 'NLK', 'NLRC4', 'NME1', 'NOC2L', 'NOS3', 'NOTCH1', 'NOTCH3', 'NOTCH4', 'NOX4', 'NPM1', 'NQO1', 'NR1I2', 'NR2E1', 'NR3C1', 'NR4A1', 'NR4A2', 'NRAS', 'NUAK1', 'NUMB', 'NUPR1', 'OGG1', 'OLIG2', 'OPN1SW', 'OSGIN1', 'OTUB1', 'OTUB2', 'OTUD5', 'PADI4', 'PALB2', 'PARK2', 'PARK7', 'PARP1', 'PATZ1', 'PAX2', 'PAX3', 'PAX8', 'PBK', 'PBRM1', 'PCBP4', 'PCNA', 'PDCD4', 'PDCD5', 'PDGFRA', 'PDGFRB', 'PDLIM7', 'PER2', 'PERP', 'PGR', 'PHB', 'PHC1', 'PHC2', 'PHC3', 'PHF20', 'PHGDH', 'PI3', 'PIAS1', 'PIAS2', 'PIAS4', 'PIK3CA', 'PIN1', 'PKM', 'PLAGL1', 'PLAU', 'PLK1', 'PLK2', 'PLK3', 'PLK4', 'PMAIP1', 'PML', 'PMS2', 'POLI', 'POLK', 'POU4F1', 'POU4F2', 'POU5F1', 'PPARGC1A', 'PPARG', 'PPIF', 'PPM1D', 'PPP1R13B', 'PPP1R13L', 'PPP1R15A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R4', 'PPP2R5C', 'PRDM1', 'PRDM2', 'PRDX1', 'PRELID1', 'PRIMA1', 'PRKAA1', 'PRKAA2', 'PRKAB1', 'PRKAB2', 'PRKAG1', 'PRKAG2', 'PRKAG3', 'PRKCA', 'PRKCD', 'PRKCZ', 'PRKD1', 'PRKDC', 'PRKG1', 'PRMT1', 'PRMT5', 'PROM1', 'PSEN1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTBP1', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2', 'PTTG1', 'RABGGTA', 'RABGGTB', 'RAD17', 'RAD1', 'RAD50', 'RAD51', 'RAD9A', 'RAD9B', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP4', 'RBBP6', 'RBBP7', 'RBBP8', 'RBL1', 'RBL2', 'RBM38', 'RBPJ', 'RCHY1', 'RCOR1', 'RECQL4', 'RELA', 'REM1', 'REST', 'RET', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RFFL', 'RFWD2', 'RING1', 'RMI1', 'DROSHA', 'RNF20', 'RNF2', 'RNF34', 'RNF43', 'ROCK1', 'RPA1', 'RPA2', 'RPA3', 'RPL11', 'RPL22', 'RPL26', 'RPL5', 'RPRM', 'RPS14', 'RPS19', 'RPS27A', 'RPS27L', 'RPS3', 'RPS6KB1', 'RQCD1', 'RRAD', 'RRM2B', 'RRM2', 'RUNX2', 'RUNX3', 'S100A2', 'S100A4', 'S100A6', 'S100B', 'SALL4', 'SCO2', 'SDHC', 'SENP1', 'SENP3', 'SERPINB5', 'SERPINE1', 'SESN1', 'SESN2', 'SESN3', 'SETD2', 'SETD7', 'SETD8', 'SETDB1', 'SFN', 'SRSF1', 'SGK1', 'SHFM1', 'SHH', 'SHISA5', 'SIK1', 'SIN3A', 'SIN3B', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SKP2', 'SLC2A14', 'SLC2A1', 'SLC2A2', 'SLC2A3', 'SLC6A6', 'SLMO1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMG1', 'SMG7', 'SMYD2', 'SNAI1', 'SNAI2', 'SOCS1', 'SOCS3', 'SOD2', 'SORT1', 'SOX2', 'SOX4', 'SP100', 'SP1', 'SP3', 'SP7', 'SPATA18', 'SPP1', 'SQSTM1', 'SRC', 'SREBF1', 'SREBF2', 'SSRP1', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STEAP3', 'STK11', 'STMN1', 'STUB1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUMO4', 'SUPT16H', 'SUV39H1', 'SUZ12', 'SYK', 'SYP', 'TADA3', 'TAF10', 'TAF11', 'TAF12', 'TAF13', 'TAF15', 'TAF1L', 'TAF1', 'TAF2', 'TAF3', 'TAF4B', 'TAF4', 'TAF5', 'TAF6', 'TAF7L', 'TAF7', 'TAF9B', 'TBPL1', 'TBPL2', 'TBP', 'TCHP', 'TCP1', 'TDG', 'TERT', 'TET2', 'TFAM', 'TFAP2A', 'TFAP2C', 'TFDP1', 'TFF1', 'TGFB1', 'TGM2', 'THBS1', 'TIMP3', 'TLR3', 'TLR9', 'TMEM219', 'TNFAIP3', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF10C', 'TNFRSF10D', 'TNF', 'TNK2', 'TNKS1BP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOE1', 'TOP1', 'TOP2A', 'TOP3A', 'TOPBP1', 'TOPORS', 'TP53AIP1', 'TP53BP1', 'TP53BP2', 'TP53I3', 'TP53INP1', 'TP53RK', 'TP63', 'TP73', 'TPT1', 'TPX2', 'TRAF6', 'TRIAP1', 'TRIM24', 'TRIM28', 'TRIM29', 'TRIM32', 'TRIM59', 'TRIM8', 'TRRAP', 'TSC2', 'TTC5', 'TTK', 'TWIST1', 'TWIST2', 'TXN', 'TYMS', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2D1', 'UBE2E1', 'UBE2I', 'UBE2K', 'UBE2N', 'UBE2Q1', 'UBE2S', 'UBE3A', 'UBN1', 'UCHL1', 'UHRF1', 'USF1', 'USP10', 'USP15', 'USP24', 'USP3', 'USP42', 'USP7', 'UTP14A', 'VEGFA', 'VHL', 'VPRBP', 'VRK1', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WWOX', 'XAF1', 'XIAP', 'XPA', 'XPO1', 'XRCC1', 'XRCC5', 'XRCC6', 'YBX1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'YY1', 'YY2', 'ZBTB33', 'ZBTB7A', 'ZEB1', 'ZEB2', 'ZKSCAN4', 'ZNF148', 'ZNF274', 'ZNF385A', 'ZNF420', 'ZNF668', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 8.942602324292859e-15 NRMSE: 2.1491473982919634e-15 MAPE: 2.502425948576119e-11 Pearson Correlation: 0.12488918872839855 Spearman Correlation: 0.20875821394281727 Coefficient of Determination: -6.609512211303561 RMSE: 1.1911692416322979 NRMSE: 0.378004963706619 MAPE: 852.3022046813347 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.29495881168940863, tolerance: 0.01090027058925727 positive)
Pearson Correlation: 0.9999763445867134 Spearman Correlation: 0.9999295082412842 Coefficient of Determination: 0.9999465364039863 RMSE: 0.003291217510182471 NRMSE: 0.0007909679188133793 MAPE: 14.551663711890638 Pearson Correlation: 0.31502642904737116 Spearman Correlation: 0.32135812167234007 Coefficient of Determination: -2.413554265438246 RMSE: 0.7978081472096951 NRMSE: 0.2531759796933533 MAPE: 667.1708591487542 Predictor: RandomForests Pearson Correlation: 0.662956796174116 Spearman Correlation: 0.5906003485941796 Coefficient of Determination: 0.36976787832351343 RMSE: 0.35733682059310323 NRMSE: 0.08587763051985178 MAPE: 704.1431686987754 Pearson Correlation: 0.5662325870207273 Spearman Correlation: 0.4523373109390392 Coefficient of Determination: 0.2646481304992504 RMSE: 0.3702905781747266 NRMSE: 0.11750779962386601 MAPE: 215.6468964503368 Protein: CTNNB1 Protein Interaction Partners Count: 992 x_train_column_count: 984 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACAN', 'ACP1', 'ACTA1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTN4', 'ACVR1B', 'ACVR1', 'ADAM10', 'ADCY7', 'ADIPOQ', 'AES', 'AFP', 'AHI1', 'AHR', 'AHSA1', 'AJAP1', 'AK9', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'ALPL', 'AMHR2', 'AMH', 'ANXA5', 'AP1M1', 'APC2', 'APCS', 'APC', 'APH1A', 'APH1B', 'AQP1', 'ARHGAP10', 'ARHGAP21', 'ARHGAP32', 'ARHGEF4', 'ARID1A', 'ARID2', 'ARMC7', 'ARMC8', 'ARVCF', 'ARX', 'AR', 'ASCL1', 'ASF1A', 'ASH2L', 'ASIP', 'ATF4', 'ATM', 'AURKA', 'AXIN1', 'AXIN2', 'BAG3', 'BCAR1', 'BCL2L1', 'BCL3', 'BCL6', 'BCL9L', 'BCL9', 'BDNF', 'BGLAP', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BMPR1B', 'BNIP2', 'BRAF', 'BRCA1', 'BRCA2', 'BRMS1L', 'BTRC', 'HILPDA', 'AK8', 'CA2', 'CA9', 'CABLES1', 'CACYBP', 'CALM1', 'CALM3', 'CARM1', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBLL1', 'CBL', 'CBY1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CD24', 'CD34', 'CD40', 'CD44', 'CDC27', 'CDC42', 'CDC73', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH16', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH26', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDHR5', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK8', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDON', 'CDX1', 'CDX2', 'CEBPA', 'CHD8', 'CHRD', 'CHUK', 'CITED1', 'CKAP5', 'CLCA1', 'CLDN3', 'CLDN5', 'COL1A1', 'COPS3', 'COPS5', 'COPS6', 'CREB1', 'CREBBP', 'CRKL', 'CRK', 'CRP', 'CRYAB', 'CSNK1A1L', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK2A3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNAL1', 'CTNNBIP1', 'CTNND1', 'CTNND2', 'CTTN', 'CUL1', 'CUL4A', 'CUL4B', 'CXCR4', 'CXXC4', 'DAB2', 'DACT1', 'DACT2', 'DACT3', 'DCT', 'DCX', 'DDB1', 'DDX39A', 'DDX3X', 'DDX5', 'DHODH', 'DHX9', 'DKK1', 'DKK2', 'DKK3', 'DKK4', 'DLG1', 'DLG2', 'DLG4', 'DLG5', 'DLGAP1', 'DLL4', 'DLX1', 'DNM2', 'DNMT1', 'DPYD', 'DSC1', 'DSC2', 'DSC3', 'DSG1', 'DSG2', 'DSG3', 'DSG4', 'DSP', 'DUSP6', 'DVL1', 'DVL2', 'DVL3', 'E2F3', 'ECM1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'ELAVL1', 'EMD', 'ENAH', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHB2', 'EPHB3', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EXOC3', 'EXOC4', 'EYA4', 'EZH2', 'EZR', 'F2RL2', 'FAF1', 'AMER1', 'FANCA', 'FASLG', 'FAS', 'FAT1', 'FAT4', 'FBXW11', 'FBXW7', 'FERMT2', 'FER', 'FGF10', 'FGF13', 'FGF2', 'FGF3', 'FGF4', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FLT3', 'FMN1', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC2', 'FOXG1', 'FOXL1', 'FOXL2', 'FOXM1', 'FOXN3', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FRAT1', 'FRAT2', 'FRZB', 'FSCN1', 'FSTL1', 'FSTL3', 'FURIN', 'FUS', 'FXR1', 'FYN', 'FZD10', 'FZD1', 'FZD2', 'FZD3', 'FZD4', 'FZD5', 'FZD6', 'FZD7', 'FZD8', 'FZD9', 'GAPDH', 'GATA2', 'GATA4', 'GCG', 'GDF2', 'GDNF', 'GFRA1', 'GJA1', 'GLI1', 'GLI2', 'GLI3', 'GLIS2', 'GLUL', 'GNA11', 'GNA12', 'GNA13', 'GNAQ', 'GNAS', 'GPC3', 'GRIA2', 'GRIP1', 'GSK3A', 'GSK3B', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HAS2', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC7', 'HERC5', 'HES7', 'HGF', 'HGS', 'HHEX', 'HIC1', 'HIF1A', 'HINT1', 'HIPK2', 'HIST1H1C', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HMGB1', 'HNF1A', 'HNF4A', 'HNRNPA1', 'HNRNPA2B1', 'HNRNPK', 'HNRNPM', 'HOXA10', 'HOXB4', 'HPGD', 'HRAS', 'HSP90AB1', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPD1', 'HTRA1', 'HTT', 'HUWE1', 'IBSP', 'IDH1', 'IDH2', 'IFNB1', 'IFRD1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP4', 'IHH', 'IKBKB', 'IL6', 'CXCL8', 'ILK', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IRF3', 'ISG15', 'ISL1', 'ITGAE', 'ITGB1', 'ITGB7', 'ITK', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'AJUBA', 'JUN', 'JUP', 'KANK1', 'KAT2A', 'KAT2B', 'KAT5', 'KCNN1', 'KCTD1', 'KDM1A', 'KDR', 'KIF18B', 'KIF3A', 'KIF5B', 'KIFC3', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KRAS', 'KREMEN1', 'KRIT1', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LATS2', 'LDB1', 'LDHB', 'LDLR', 'LEF1', 'LEO1', 'LGR4', 'LGR5', 'LGR6', 'LHCGR', 'LHX8', 'LIF', 'LIMA1', 'LMNA', 'LMNB1', 'LOX', 'LRP4', 'LRP5L', 'LRP5', 'LRP6', 'LRRFIP1', 'LRRK2', 'LZTFL1', 'MACF1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8IP1', 'MAPK8', 'MAPK9', 'MDFIC', 'MDFI', 'MDK', 'MDM2', 'MED12', 'MED1', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'KMT2D', 'MLLT10', 'MLLT11', 'MLLT4', 'MLLT6', 'KMT2A', 'MME', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP25', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MRAP', 'MSH2', 'MSH6', 'MSN', 'MSX1', 'MSX2', 'MTDH', 'MTOR', 'MUC13', 'MUC1', 'MUTYH', 'MYCN', 'MYC', 'MYF5', 'MYO1D', 'MYO6', 'MYO7A', 'MYOD1', 'MYOG', 'NANOG', 'NCAM1', 'NCCRP1', 'NCOA2', 'NCSTN', 'NDP', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEURL2', 'NF1', 'NF2', 'NFAT5', 'NFKB1', 'NIT1', 'NKD1', 'NKX2-5', 'NLK', 'NME1', 'NOG', 'NONO', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR0B1', 'NR4A1', 'NR4A2', 'NR5A1', 'NR5A2', 'NRAS', 'NRIP1', 'NTRK1', 'NTRK2', 'NTRK3', 'NUDT5', 'NUMB', 'NUP153', 'NUTF2', 'OTX2', 'PAK1', 'PAK2', 'PAK3', 'PANK4', 'PARD3', 'PARD6A', 'PARK2', 'PARP1', 'PAX3', 'PAX6', 'PAX7', 'PAX8', 'PDGFRA', 'PDGFRB', 'PECAM1', 'PGK1', 'PGR', 'PHB', 'JADE1', 'PI3', 'PICK1', 'PIK3CA', 'PIK3R1', 'PIK3R2', 'PIN1', 'PIP5K1A', 'PIP5K1C', 'PITX2', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAG1', 'PLEKHA7', 'PLK1', 'PML', 'PMS2', 'POLE', 'PORCN', 'POTEF', 'POU5F1', 'PPARD', 'PPARG', 'PPM1A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R2B', 'PPP2R5A', 'PPP2R5B', 'PPP2R5C', 'PPP2R5D', 'PPP2R5E', 'PRKACA', 'PRKACB', 'PRKACG', 'PRKAR1A', 'PRKCA', 'PRKCG', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRL', 'PRMT1', 'PROC', 'PROM1', 'PROP1', 'PSEN1', 'PSEN2', 'PSENEN', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTEN', 'PTGES3', 'PTGS2', 'PTH1R', 'PTH', 'PTK2', 'PTK7', 'PTMA', 'PTN', 'PTPN11', 'PTPN13', 'PTPN1', 'PTPN6', 'PTPRB', 'PTPRC', 'PTPRF', 'PTPRG', 'PTPRJ', 'PTPRK', 'PTPRM', 'PTPRU', 'PTPRZ1', 'PVRL1', 'PVRL2', 'PXN', 'PYGO1', 'PYGO2', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RALGDS', 'RANBP3', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RAPGEF2', 'RAPGEF6', 'RAPSN', 'RARA', 'RARB', 'RARG', 'RARS', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP5', 'RBMX', 'RBPJ', 'RBX1', 'RELA', 'REM1', 'RET', 'RHOA', 'RIPK2', 'RNF220', 'RNF43', 'ROBO1', 'ROCK1', 'ROCK2', 'ROR2', 'RPRD1A', 'RPS27A', 'RPSA', 'RSPO1', 'RSPO2', 'RSPO3', 'RSPO4', 'RUNX2', 'RUNX3', 'RUVBL1', 'RUVBL2', 'RXRA', 'RYK', 'S100A4', 'S100A6', 'SALL1', 'SALL4', 'SATB1', 'SCRIB', 'SDHC', 'SERPINE1', 'SETD2', 'SETD7', 'SFN', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHFM1', 'SHH', 'SIAH1', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT6', 'SKP1', 'SLC6A3', 'SLC9A3R1', 'SLCO1B3', 'SLCO2A1', 'SLIT1', 'SLK', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD5', 'SMAD7', 'SMAD9', 'SMARCA2', 'SMARCA4', 'SMARCA5', 'SMARCB1', 'SMO', 'SMURF1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNX1', 'SOST', 'SOX10', 'SOX13', 'SOX17', 'SOX1', 'SOX2', 'SOX3', 'SOX4', 'SOX6', 'SOX7', 'SOX8', 'SOX9', 'SP1', 'SP7', 'SPAG9', 'SPATA13', 'SPEN', 'SPN', 'SPP1', 'SRC', 'STAT3', 'STK11', 'STRAP', 'STX4', 'SUFU', 'SUV39H1', 'SYP', 'TADA3', 'TAX1BP3', 'TAZ', 'TBL1XR1', 'TBL1X', 'TBX5', 'TBX6', 'TCF12', 'TCF3', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TFAP2A', 'TFCP2', 'TFF1', 'TFF2', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBR1', 'TGFBR2', 'TGM2', 'TJP1', 'TJP2', 'TLE1', 'TLE2', 'TLE3', 'TLE4', 'TNFRSF11B', 'TNFSF11', 'TNF', 'TNIK', 'TNKS2', 'TNKS', 'TNS1', 'TOB1', 'TOP2A', 'TP53', 'TRAF4', 'TRIM33', 'TRIM37', 'TRIP10', 'TRRAP', 'TSC2', 'TUBA1A', 'TWIST1', 'TYMS', 'T', 'UBA52', 'UBB', 'UBC', 'UBE2B', 'UBE2R2', 'UBE3A', 'UBR5', 'UCHL1', 'UMPS', 'UPRT', 'USP4', 'USP7', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VAV2', 'VAV3', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VHL', 'VIM', 'WDR64', 'WDTC1', 'WHSC1', 'WIF1', 'WISP1', 'WLS', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'WWTR1', 'XPO1', 'YAP1', 'YARS', 'YEATS4', 'YES1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'ZAP70', 'ZAR1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZIC3', 'ZNRF3', 'ZYX', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 1.1033719555473809e-14 NRMSE: 2.664892173575937e-15 MAPE: 3.7411069767215685e-11 Pearson Correlation: 0.02958084013656427 Spearman Correlation: 0.09113081210488909 Coefficient of Determination: -4.530553038451699 RMSE: 1.887141956840061 NRMSE: 0.39675846372047363 MAPE: 1577.6390601664214 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.42618291897252875, tolerance: 0.02722969373777278 positive)
Pearson Correlation: 0.9999881132228724 Spearman Correlation: 0.999970735997374 Coefficient of Determination: 0.9999741565875285 RMSE: 0.0036166390740755027 NRMSE: 0.0008734999212818817 MAPE: 2.225704881420794 Pearson Correlation: 0.027440684698895407 Spearman Correlation: 0.07958453347298597 Coefficient of Determination: -1.7026260096232577 RMSE: 1.3192079675316761 NRMSE: 0.2773542947463788 MAPE: 1244.0890900442375 Predictor: RandomForests Pearson Correlation: 0.6461410084604152 Spearman Correlation: 0.6459070131018553 Coefficient of Determination: 0.40205662224684124 RMSE: 0.5501235928851312 NRMSE: 0.13286725748360817 MAPE: 467.12340250751686 Pearson Correlation: 0.6714416404568353 Spearman Correlation: 0.47027768426040223 Coefficient of Determination: 0.29630819114905715 RMSE: 0.6731495154156094 NRMSE: 0.14152500113859418 MAPE: 610.5293619376868 Protein: CCNE1 Protein Interaction Partners Count: 350 x_train_column_count: 347 x_train columns: ['ABL1', 'AKT1', 'AKT2', 'AKT3', 'ALDH18A1', 'ANAPC10', 'ANAPC13', 'ANAPC1', 'ANAPC2', 'ANAPC4', 'ANAPC5', 'ANAPC7', 'ANXA5', 'ARID1A', 'AR', 'ATM', 'AURKA', 'AURKB', 'BARD1', 'BCL2L1', 'BIRC5', 'BRCA1', 'BRCA2', 'BTG2', 'BTRC', 'BUB1B', 'BUB1', 'BUB3', 'RGCC', 'MLIP', 'CABLES1', 'CALM1', 'CAPRIN1', 'CASP3', 'CASP9', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNF', 'CCNG1', 'CCNH', 'CCNK', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CDC16', 'CDC20', 'CDC23', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC26', 'CDC27', 'CDC45', 'CDC6', 'CDC7', 'CDCA2', 'CDCA5', 'CDCA8', 'CDH1', 'CDK12', 'CDK13', 'CDK14', 'CDK15', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CENPA', 'CENPE', 'CHAF1A', 'CHD1L', 'CHEK1', 'CHEK2', 'CINP', 'CKS1B', 'CKS2', 'COPS5', 'CREBBP', 'CSK', 'CTNNB1', 'CUL1', 'CUL3', 'CUL4B', 'DBF4B', 'DBF4', 'DGCR8', 'DICER1', 'DTL', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'EBNA1BP2', 'ECT2', 'EGFR', 'EGF', 'ELAVL1', 'ELSPBP1', 'EP400', 'ERBB2', 'ERBB3', 'ERBB4', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM58A', 'FAM83H', 'FBXO5', 'FBXW7', 'FEN1', 'FGFR1', 'FGFR2', 'FGFR3', 'FOXM1', 'FZR1', 'GAPDH', 'GLI1', 'GMNN', 'GSK3B', 'H1F0', 'HDAC1', 'HEATR3', 'HERC5', 'HIST1H1A', 'HIST1H1B', 'HIST1H4A', 'HRAS', 'IFNAR1', 'IGF1R', 'IGF1', 'ITPKB', 'JUN', 'KIF11', 'KIF20A', 'KIF23', 'KIF2C', 'KPNA2', 'KRAS', 'LATS2', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'GMNC', 'MAD2L1', 'MAPK3', 'MATK', 'MAX', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDM2', 'MEGF11', 'MELK', 'MKI67', 'KMT2D', 'KMT2B', 'MNAT1', 'MRE11A', 'MTOR', 'MYBL2', 'MYC', 'NBN', 'NF1', 'NFYB', 'NMI', 'NOTCH1', 'NOTCH3', 'NPAT', 'NRAS', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PARK2', 'PARP1', 'PCBP4', 'PCNA', 'PIK3CA', 'PIK3R1', 'PKMYT1', 'PLK1', 'PLK4', 'POLA1', 'POLD1', 'PPP1R1C', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R4', 'PRC1', 'PRKAR1A', 'PRKAR2A', 'PRMT5', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB10', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSMF1', 'PTEN', 'PTGDR', 'PTK6', 'PTTG1', 'RAD51', 'RAD54L', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RBX1', 'REL', 'REM1', 'RHOA', 'RHOBTB3', 'RINT1', 'RNASE1', 'RPRD1A', 'RPS27A', 'RRM1', 'RRM2', 'RRN3', 'RSF1', 'SHFM1', 'SKP1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'ST8SIA1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STK3', 'STK4', 'TARBP1', 'TCP1', 'TERF1', 'TERT', 'TFDP1', 'TK1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TPX2', 'TTK', 'TUBG1', 'TYMS', 'UBA52', 'UBB', 'UBC', 'UBE2C', 'UBE2QL1', 'UBE2S', 'UHRF2', 'WEE1', 'WEE2', 'XIAP', 'YAP1', 'ZNF217', 'ZNF33A', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.9588172046682858 Spearman Correlation: 0.851582619903705 Coefficient of Determination: 0.9193304319679054 RMSE: 0.1433764922299906 NRMSE: 0.03460107928421233 MAPE: 25.568557509551603 Pearson Correlation: 0.4615616280630987 Spearman Correlation: 0.38212197159565586 Coefficient of Determination: -0.6204238359108849 RMSE: 0.5754946986563769 NRMSE: 0.2348382839534714 MAPE: 168.54761910187082 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 5.881035590262711, tolerance: 0.013709715616187399 positive)
Pearson Correlation: 0.9575409559853709 Spearman Correlation: 0.8477791859860768 Coefficient of Determination: 0.9168831283379255 RMSE: 0.1455350769171296 NRMSE: 0.035122010984658544 MAPE: 26.58130121132799 Pearson Correlation: 0.49177786357261355 Spearman Correlation: 0.4214341824711032 Coefficient of Determination: -0.43233244261526504 RMSE: 0.5410643631463652 NRMSE: 0.22078852654303652 MAPE: 158.42287157910536 Predictor: RandomForests Pearson Correlation: 0.8598922666936342 Spearman Correlation: 0.7165518489905631 Coefficient of Determination: 0.7342954557399095 RMSE: 0.26020915735475864 NRMSE: 0.06279633114239898 MAPE: 55.39230221712956 Pearson Correlation: 0.8385204632334841 Spearman Correlation: 0.7085048252867513 Coefficient of Determination: 0.6938477614257615 RMSE: 0.2501472515840754 NRMSE: 0.10207592082921547 MAPE: 71.80999227462355 Protein: CCND1 Protein Interaction Partners Count: 857 x_train_column_count: 849 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTL6B', 'AFP', 'AHR', 'AKAP12', 'AKAP8', 'AKR1B10', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDOA', 'ALK', 'ANO1', 'ANXA5', 'APAF1', 'APC', 'APEX1', 'AREG', 'ARHGEF2', 'ARID1A', 'ARID1B', 'ARID2', 'ARID4A', 'AR', 'ASIP', 'ATF2', 'ATF3', 'ATF4', 'ATM', 'ATXN1', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'B2M', 'BANP', 'BARX2', 'BAX', 'BCAR1', 'BCAR3', 'BCCIP', 'BCL2A1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL3', 'BCL6', 'BCL9', 'BECN1', 'BGLAP', 'BHLHE40', 'BIRC2', 'BIRC3', 'BIRC5', 'BMI1', 'BMP4', 'BMP6', 'BRAF', 'BRCA1', 'BRCA2', 'BRD2', 'BRD4', 'BTC', 'BTG2', 'BTRC', 'RGCC', 'COPRS', 'CA9', 'CARD11', 'CARM1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBFB', 'CCDC62', 'CCL2', 'CCL5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNC', 'CCND2', 'CCND3', 'CCNDBP1', 'CCNE1', 'CCNE2', 'CCNG2', 'CCNH', 'CCNK', 'CCNL1', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CD19', 'CD22', 'CD24', 'CD34', 'CD38', 'CD44', 'CD5', 'CD79A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC6', 'CDC73', 'CDCA7L', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK12', 'CDK13', 'CDK14', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK20', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CDX2', 'CENPE', 'CEP57', 'CFLAR', 'CHEK1', 'CHEK2', 'CHKA', 'CHUK', 'CKS1B', 'CKS2', 'CLCN3', 'COL1A1', 'CR2', 'CREB1', 'CREBBP', 'CRKL', 'CRYAB', 'CSF2', 'CTBP1', 'CTGF', 'CTNNB1', 'CTNND1', 'CTTN', 'CUL1', 'CUL3', 'CUL7', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'CYR61', 'DACH1', 'DAXX', 'DDIT3', 'DDX53', 'DECR1', 'DHFR', 'DICER1', 'DKK1', 'DKK3', 'DLL1', 'DMTF1', 'DND1', 'DNMT1', 'DNMT3A', 'DNTT', 'DVL1', 'DVL2', 'DYRK1A', 'DYRK1B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EDN1', 'EEF1A1', 'EGFR', 'EGF', 'EGLN2', 'EGR1', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF3I', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4E', 'EIF4G1', 'ELAVL1', 'ELSPBP1', 'EP300', 'EPCAM', 'EPHA2', 'EPHA7', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EWSR1', 'EYA1', 'EZH2', 'FABP4', 'FADD', 'FAM58A', 'FAM83H', 'FASLG', 'FAT1', 'FBXO31', 'FBXO4', 'FBXW7', 'FBXW8', 'FGF13', 'FGF19', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FHL2', 'FIGF', 'FLCN', 'FLNA', 'FLT1', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXC1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FRZB', 'FSTL3', 'FZD1', 'FZD2', 'FZD7', 'FZD9', 'FZR1', 'GADD45A', 'GAL', 'GAPDH', 'GAST', 'GATA3', 'GATA4', 'GDF15', 'GDF2', 'GGNBP2', 'GGT1', 'GIT1', 'GJA1', 'GJB1', 'GLI1', 'GLI2', 'GLI3', 'GLTSCR2', 'GNB2L1', 'GPER1', 'GRB2', 'GREB1', 'GRM4', 'GRP', 'GSK3B', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HBEGF', 'HBZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC4', 'HEXIM1', 'HEY1', 'HGF', 'HIF1A', 'HIST1H2AA', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AH', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AC', 'HIST2H2BE', 'HIST2H4A', 'HIST4H4', 'HMGA2', 'HMOX1', 'HNF1A', 'HNF4A', 'HNRNPD', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB8', 'ICAM1', 'ID1', 'ID2', 'IFNAR1', 'IFNB1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP3', 'IGFBP5', 'IHH', 'IKBKB', 'IL10', 'IL17A', 'IL2', 'IL4', 'IL6', 'IL7', 'CXCL8', 'ILK', 'INSM1', 'INS', 'IRF1', 'IRS1', 'ISG15', 'ITGB1', 'ITPKB', 'ITPKC', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUNB', 'JUND', 'JUN', 'KAT2A', 'KAT2B', 'KDM1A', 'KDM5B', 'KDR', 'KHDRBS1', 'KIF18B', 'KIN', 'KITLG', 'KIT', 'KLF13', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KRAS', 'KRT10', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LDB3', 'LEF1', 'LEP', 'LGALS3', 'LGR5', 'LIMK2', 'LIMS1', 'LIN28B', 'LMNA', 'LMNB1', 'LOX', 'LRP5', 'LRP6', 'LYN', 'MAFB', 'MAF', 'MAML1', 'MAML2', 'MAML3', 'MAMLD1', 'MAP2K1', 'MAP2K2', 'MAP2K4', 'MAP2K7', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDK', 'MDM2', 'MDM4', 'MEN1', 'MET', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'MLXIPL', 'MME', 'MMP11', 'MMP14', 'MMP15', 'MMP1', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MNAT1', 'MOV10', 'MSH2', 'MST1', 'MTOR', 'MUC1', 'MYBL2', 'MYB', 'MYCN', 'MYC', 'MYEOV', 'MYF5', 'MYOD1', 'MYOG', 'NACA2', 'NADSYN1', 'NANOG', 'NCAM1', 'NCOA1', 'NCOA3', 'NCOR1', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NGF', 'NKX2-1', 'NME1-NME2', 'NME1', 'NME2', 'NMI', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NQO1', 'NR0B2', 'NR1H3', 'NR2E1', 'NR3C1', 'NR4A3', 'NRAS', 'NRF1', 'NUDT21', 'ODC1', 'ORAI1', 'ORAOV1', 'ORC4', 'PAK1', 'PAK4', 'PARK2', 'PARP1', 'PAX2', 'PAX5', 'PAX6', 'PBRM1', 'PBX3', 'PCNA', 'PDCD4', 'PDGFRA', 'PDGFRB', 'PDZK1', 'PECAM1', 'PELP1', 'PGR', 'PI3', 'PI4K2A', 'PIK3CA', 'PIK3R1', 'PKLR', 'PKM', 'PLAUR', 'PLAU', 'PLK1', 'PMAIP1', 'POLR2A', 'POTEF', 'POU2F1', 'POU5F1', 'PPARG', 'PPP2R4', 'PRDM5', 'PRKACA', 'PRL', 'PRMT5', 'PRNP', 'PROM1', 'PSAT1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTCHD3', 'PTEN', 'PTF1A', 'PTGS2', 'PTHLH', 'PTH', 'PTK2', 'PTK6', 'PTPN11', 'PTPRCAP', 'PTPRC', 'PXN', 'RAD51', 'RAF1', 'RALA', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RBX1', 'RCC1', 'RELA', 'RELB', 'REL', 'REM1', 'RET', 'RHEB', 'RHOA', 'RHOC', 'RICTOR', 'RNASE1', 'DROSHA', 'RND3', 'RNMT', 'ROCK1', 'RPRD1B', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KA6', 'RPS6KB1', 'RPS6', 'RPTOR', 'RREB1', 'RSF1', 'RUNX1', 'RUNX2', 'RUNX3', 'SDC1', 'SDHC', 'SENP1', 'SERPINE1', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHC1', 'SHFM1', 'SHH', 'SIRT1', 'SIX1', 'SIX3', 'SKP1', 'SKP2', 'SLC25A16', 'SLC25A6', 'SLC2A1', 'SLC35B2', 'SLC39A4', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMO', 'SNAI1', 'SNAI2', 'SNCA', 'SNIP1', 'SNW1', 'SNX33', 'SOCS3', 'SOX11', 'SOX17', 'SOX2', 'SOX4', 'SOX6', 'SOX9', 'SP1', 'SPN', 'SPP1', 'SPRY1', 'SRC', 'SREBF1', 'STAT1', 'STAT3', 'STAT4', 'STAT5A', 'STAT5B', 'STAT6', 'STC2', 'STIM1', 'STK11', 'STK24', 'STMN1', 'SUFU', 'SULF2', 'SUV39H1', 'TAF1', 'TBP', 'TBX2', 'TCEAL7', 'TCF4', 'TCF7L2', 'TCF7', 'TERT', 'TET3', 'TFDP1', 'TFF1', 'TGFA', 'TGFB1', 'TGFBR2', 'THBS1', 'THRA', 'THRB', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLR9', 'TM4SF1', 'TMPRSS4', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF8', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP2A', 'TP53', 'TP63', 'TP73', 'TRPV2', 'TSC22D3', 'TSC2', 'TWIST1', 'TXN', 'TYMS', 'UBA52', 'UBA7', 'UBB', 'UBC', 'UBE2C', 'UBTF', 'URGCP', 'USP18', 'USP2', 'USP9X', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VIP', 'VRK1', 'WDR77', 'WDTC1', 'WEE1', 'WHSC1', 'WIF1', 'WISP1', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'XBP1', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YY1', 'ZBTB17', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.3396670166298647e-14 NRMSE: 1.494784769316687e-14 MAPE: 6.235750412078692e-11 Pearson Correlation: 0.12327578045130202 Spearman Correlation: 0.10555493210638538 Coefficient of Determination: -9.17802889712831 RMSE: 0.7305851371871278 NRMSE: 0.460762573907119 MAPE: 1839.719538642041 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.1735450198628792, tolerance: 0.003106817057166876 positive)
Pearson Correlation: 0.9998636730112127 Spearman Correlation: 0.9997745959111544 Coefficient of Determination: 0.9997019455091765 RMSE: 0.004148723940636473 NRMSE: 0.002650569211124617 MAPE: 9.516934688807462 Pearson Correlation: 0.08862479572401402 Spearman Correlation: 0.07849723812017606 Coefficient of Determination: -6.5262772283069355 RMSE: 0.6282450836794676 NRMSE: 0.3962191496464857 MAPE: 1552.82867680451 Predictor: RandomForests Pearson Correlation: 0.5853438572361938 Spearman Correlation: 0.5430399474997273 Coefficient of Determination: 0.2722733673298181 RMSE: 0.20499857263689927 NRMSE: 0.13097109201064341 MAPE: 492.47389786485513 Pearson Correlation: 0.4825186092040556 Spearman Correlation: 0.44855671517101214 Coefficient of Determination: 0.19624330619944086 RMSE: 0.20530583584564846 NRMSE: 0.1294814807301012 MAPE: 480.5397909847869 Protein: ERBB2 Protein Interaction Partners Count: 663 x_train_column_count: 657 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACPP', 'ACTA2', 'ACTB', 'ACTG1', 'ADAM10', 'ADAM17', 'ADRB2', 'AFP', 'AGRN', 'AKT1S1', 'AKT1', 'AKT2', 'ALB', 'ALDH1A1', 'ALK', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'ANO1', 'ANXA2', 'ANXA5', 'AP2B1', 'APP', 'AREG', 'ARHGEF11', 'ARHGEF12', 'ARID1A', 'ARL6IP5', 'AR', 'ATM', 'ATP2B2', 'AURKB', 'AXIN1', 'BAG1', 'BARD1', 'BCAR1', 'BCAR3', 'BCAS1', 'BCL2L11', 'BCL2L1', 'BDNF', 'BECN1', 'BEST1', 'BIRC5', 'BLNK', 'BMI1', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BSG', 'BTC', 'MIEN1', 'CA9', 'CALU', 'CARTPT', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAV1', 'CBLB', 'CBLC', 'CBL', 'CCL27', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD19', 'CD22', 'CD247', 'CD24', 'CD274', 'CD28', 'CD33', 'CD34', 'CD44', 'CD46', 'CD52', 'CD68', 'CD6', 'CD80', 'CD82', 'CDC37', 'CDC42', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK4', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CEACAM5', 'CEP70', 'CHEK2', 'CHGA', 'CHKA', 'CHKB', 'CISH', 'CLDN3', 'CLDN4', 'CLDN7', 'CLTC', 'CNN1', 'COPS5', 'CPNE3', 'CREB1', 'CRKL', 'CRK', 'YBX3', 'CSF1', 'CSF2', 'CSF3', 'CSK', 'CSPG4', 'CTAG1B', 'CTLA4', 'CTNNB1', 'CTNND1', 'CTSB', 'CTSD', 'CTTN', 'CUL5', 'CXCL12', 'CXCR1', 'CXCR4', 'CYCS', 'CYP19A1', 'CYTIP', 'DCN', 'DDX41', 'DDX53', 'DHH', 'DIAPH1', 'DICER1', 'DLG4', 'DMTF1', 'DNAJA3', 'DNM2', 'DNMT1', 'DOCK1', 'DOCK7', 'DUSP6', 'E2F1', 'E2F3', 'EEA1', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EGFR', 'EGF', 'EIF3A', 'EIF4EBP1', 'EIF4E', 'ELAVL1', 'ELF3', 'EML4', 'ENO2', 'EP300', 'EPCAM', 'EPGN', 'EPHA2', 'EPS15', 'EPX', 'ERAL1', 'ERBB2IP', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ERRFI1', 'ESCO1', 'ESR1', 'ESR2', 'ESRRB', 'ETS1', 'ETS2', 'ETV4', 'ETV6', 'EZH2', 'EZR', 'FASLG', 'FASN', 'FBXW7', 'FCGR1A', 'FCGR1B', 'FCGRT', 'FGF10', 'FGF13', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FIGF', 'FLT1', 'FLT3LG', 'FN1', 'FOLH1', 'FOLR1', 'FOS', 'FOXA1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXP3', 'FREM2', 'FSIP1', 'FYN', 'GAB1', 'GABPB1', 'GAPDH', 'GATA3', 'GATA4', 'GDF2', 'GLI1', 'GLI2', 'GLS', 'GNA11', 'GNAQ', 'GNAS', 'GNRH1', 'GPER1', 'GRAP2', 'GRB2', 'GRB7', 'GSTP1', 'GZMB', 'H2AFX', 'H2AFY', 'HBEGF', 'HDAC1', 'HDAC6', 'HEATR6', 'HGF', 'HIF1A', 'HK1', 'HLA-A', 'HMGA2', 'HNF4A', 'HOXB7', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPG2', 'ICAM1', 'ID1', 'IDH1', 'IDH2', 'IFNG', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IHH', 'IL10', 'IL2', 'IL4', 'IL6R', 'IL6ST', 'IL6', 'CXCL8', 'ILK', 'INPP4B', 'INS', 'IQGAP1', 'IQSEC1', 'IRS1', 'ITGA5', 'ITGA6', 'ITGAV', 'ITGB1', 'ITGB3', 'ITGB4', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JUN', 'JUP', 'KDR', 'KITLG', 'KLK3', 'KLRK1', 'KRAS', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'L1CAM', 'LAMP1', 'LCN2', 'LDHA', 'LEP', 'LIN28A', 'LIN7A', 'LIN7B', 'LIN7C', 'LINGO1', 'LOX', 'LRIG1', 'LRPPRC', 'MAGEA1', 'MAGEA3', 'MAGED4B', 'MAGED4', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK8', 'MATK', 'MCL1', 'MDK', 'MDM2', 'MEMO1', 'MET', 'MGMT', 'MKI67', 'MLANA', 'MLH1', 'KMT2C', 'MME', 'MMP11', 'MMP14', 'MMP16', 'MMP1', 'MMP2', 'MMP7', 'MMP9', 'MPP1', 'MRAP', 'MRAS', 'MSH2', 'MSH6', 'MSLN', 'MTA1', 'MTOR', 'MUC13', 'MUC16', 'MUC1', 'MUC4', 'MUC6', 'MUCL1', 'MYBL2', 'MYCN', 'MYC', 'NANOG', 'NCAM1', 'NCL', 'NCOA1', 'NCOA3', 'NCOR1', 'NDRG1', 'NF1', 'NF2', 'NFE2L2', 'NGF', 'NISCH', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NR1H4', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NRP1', 'NTF3', 'NTF4', 'OPCML', 'OSMR', 'PA2G4', 'PADI2', 'PAK1', 'PALB2', 'PAQR3', 'PARP1', 'PAX2', 'PCSK9', 'PDCD1LG2', 'PDCD1', 'PDCD4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PDGFRA', 'PDPN', 'PECAM1', 'PELP1', 'PEPD', 'PFKFB3', 'PGAP3', 'PGF', 'PGR', 'PI3', 'PIK3C2A', 'PIK3C2B', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIN1', 'PIP', 'PLAUR', 'PLAU', 'PLCG1', 'PLCG2', 'PLEK', 'PLG', 'PLXNB1', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPP3CA', 'PRDM10', 'PRF1', 'PRKACA', 'PRL', 'PROM1', 'PSCA', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'PTPN1', 'PTPRC', 'PTPRO', 'PTPRU', 'PTS', 'PXN', 'RAB25', 'RAD51', 'RAF1', 'RANBP2', 'RARA', 'RASA1', 'RASA2', 'RASSF1', 'RB1', 'RBPJ', 'RDX', 'RECK', 'REM1', 'REN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'S100A14', 'SCGB2A2', 'SCUBE2', 'SDC1', 'SDHC', 'SEMA3D', 'SEMA4D', 'SERPINB5', 'SERPINE1', 'SFRP1', 'PEAK1', 'SH3BGRL3', 'SH3BGRL', 'SH3TC2', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SIAH2', 'PMEL', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC4A7', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SMUG1', 'SMYD3', 'SNAI1', 'SNAI2', 'SOCS1', 'SOS1', 'SOX10', 'SOX2', 'SOX9', 'SP3', 'SPP1', 'SPRY2', 'SRCIN1', 'SRC', 'STARD3', 'STAT1', 'STAT2', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STOM', 'STUB1', 'SYP', 'TAGLN', 'TBX1', 'TERT', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TFRC', 'TGFA', 'TGFB1', 'THBS1', 'THRA', 'TIMP1', 'TJP1', 'TMPRSS2', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF4', 'TNFRSF8', 'TNFRSF9', 'TNFSF11', 'TNF', 'TNS1', 'TNS3', 'TNS4', 'TOB1', 'TOP1', 'TOP2A', 'TP53', 'TP63', 'TSC2', 'TWIST1', 'TYMS', 'TYR', 'UBA52', 'UBB', 'UBC', 'USP2', 'USP9X', 'VAV1', 'VAV2', 'VAV3', 'VCL', 'VEGFA', 'VEGFB', 'VEGFC', 'VIM', 'WASL', 'WDFY2', 'WDTC1', 'WNT10A', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7B', 'WNT9A', 'WNT9B', 'WT1', 'WWOX', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YES1', 'YY1', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 7.308989911325539e-14 NRMSE: 1.2452067245899347e-14 MAPE: 1.191300632422045e-10 Pearson Correlation: 0.3745279091177631 Spearman Correlation: 0.32295455423977304 Coefficient of Determination: -4.724904627859422 RMSE: 2.4804072985496126 NRMSE: 0.4466466126246286 MAPE: 1303.1548411215722 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 1.0569617872506296, tolerance: 0.051756548208396 positive)
Pearson Correlation: 0.9997660004690054 Spearman Correlation: 0.9991895855754948 Coefficient of Determination: 0.9995284796194861 RMSE: 0.021298143497863888 NRMSE: 0.003628489275067531 MAPE: 16.925005520642248 Pearson Correlation: 0.5302126026071575 Spearman Correlation: 0.25340746568862915 Coefficient of Determination: -1.4071780903938906 RMSE: 1.6083959967431674 NRMSE: 0.28962365339128593 MAPE: 847.2566469486405 Predictor: RandomForests Pearson Correlation: 0.8618630119517803 Spearman Correlation: 0.6834204814768784 Coefficient of Determination: 0.7353579549372533 RMSE: 0.5045694318770525 NRMSE: 0.08596170705096555 MAPE: 418.16678975069743 Pearson Correlation: 0.7929419166701542 Spearman Correlation: 0.6877087999164878 Coefficient of Determination: 0.5851963572608272 RMSE: 0.6676673719782903 NRMSE: 0.12022677494477083 MAPE: 204.04317470851737 Protein: ERBB3 Protein Interaction Partners Count: 245 x_train_column_count: 247 x_train columns: ['ADAM17', 'AGRN', 'AGTR2', 'AKT1', 'AKT2', 'AKT3', 'ALAS2', 'ALB', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'APIP', 'AREG', 'AR', 'BAMBI', 'BDNF', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BTC', 'CADM4', 'CASK', 'CASP3', 'CBLB', 'CBLC', 'CBL', 'CCND1', 'CCNE1', 'CD44', 'CD82', 'CDC42', 'CDH1', 'CDK4', 'CDK5', 'CDKN1B', 'CDKN2A', 'CLEC16A', 'COMMD5', 'COQ7', 'CRKL', 'CRK', 'CRYZL1', 'CSF1', 'CSK', 'CSPG5', 'CTNNB1', 'DCN', 'DHH', 'DOCK7', 'DUSP6', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EIF4EBP1', 'EIF4E', 'EML4', 'EPCAM', 'EPGN', 'EPN1', 'ERBB2IP', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'ESR2', 'FBXO9', 'FGF10', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FIGF', 'FKBP14', 'FLNA', 'FLT3LG', 'FN1', 'FOXA1', 'FOXO3', 'FREM2', 'FTSJ1', 'GAB1', 'GAPDH', 'GLE1', 'GRB2', 'GRB7', 'GRHL2', 'HBEGF', 'HGF', 'HGS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPG2', 'IGF1', 'IGF2', 'IL6ST', 'ILK', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'ITPKB', 'JAK1', 'JAK2', 'JUN', 'KDR', 'KITLG', 'KRAS', 'L1CAM', 'LAMA1', 'LAMB1', 'LAMC2', 'LIN7A', 'LIN7B', 'LIN7C', 'LRIG1', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARCH7', 'MDM2', 'MET', 'MITF', 'MMP9', 'MRPL49', 'MTOR', 'MUC1', 'MUC4', 'MYC', 'N4BP1', 'NDRG1', 'NEDD4L', 'NEDD4', 'NF1', 'NGF', 'NICN1', 'NOTCH1', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NTF3', 'NTF4', 'OAT', 'PA2G4', 'PARK7', 'PCSK9', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PGR', 'PI3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIP5K1C', 'PLCG1', 'PLCG2', 'PPP1R9A', 'PRKACA', 'PTEN', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN22', 'PTPN2', 'RASA1', 'RASA2', 'REM1', 'RGS4', 'RHOA', 'RHOC', 'RNF41', 'ROR1', 'RRAS2', 'SH2B3', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SLC25A16', 'SMAD4', 'SNAI2', 'SOS1', 'SOX10', 'SOX2', 'SPARC', 'SPRY2', 'SRC', 'STAT3', 'STAT5A', 'STAT5B', 'SYN3', 'TCF7L2', 'TGFA', 'TMEFF2', 'TNFRSF13C', 'TNS1', 'TP53', 'USP8', 'VAV1', 'VAV2', 'VAV3', 'VEGFA', 'VEGFB', 'VEGFC', 'WNT1', 'WNT5A', 'ZEB1', 'ZNF217', 'KRBOX4', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.7525779749217282 Spearman Correlation: 0.7414768781715668 Coefficient of Determination: 0.5663736083372896 RMSE: 0.31457738498282223 NRMSE: 0.08601614490437255 MAPE: 195.5605728126393 Pearson Correlation: 0.1910394634967968 Spearman Correlation: 0.24006034987967434 Coefficient of Determination: -1.5365174079224153 RMSE: 0.612500634147943 NRMSE: 0.3014764376832571 MAPE: 423.5878774811986 Predictor: ElasticNet Pearson Correlation: 0.7503113448779016 Spearman Correlation: 0.7404445658758285 Coefficient of Determination: 0.5629466002308949 RMSE: 0.3158180124360715 NRMSE: 0.08635537460073758 MAPE: 198.05849050829 Pearson Correlation: 0.20622183016053527 Spearman Correlation: 0.23301786805321764 Coefficient of Determination: -1.337507727762917 RMSE: 0.5879821565069904 NRMSE: 0.2894082978569307 MAPE: 406.82690939108 Predictor: RandomForests Pearson Correlation: 0.5779349321581143 Spearman Correlation: 0.5952826445215312 Coefficient of Determination: 0.3099301228298601 RMSE: 0.3968406749485059 NRMSE: 0.10850972329808019 MAPE: 233.0343291393106 Pearson Correlation: 0.42093925854669745 Spearman Correlation: 0.3463788156698109 Coefficient of Determination: 0.16506208829735813 RMSE: 0.3514104804695851 NRMSE: 0.17296631858007702 MAPE: 236.1590586353873 Fold: 5 Protein: RB1 Protein Interaction Partners Count: 369 x_train_column_count: 366 x_train columns: ['AATF', 'ABCC1', 'ABL1', 'ACTL6A', 'ACTL6B', 'AFAP1', 'AHR', 'AKT1', 'ANXA5', 'ARID1A', 'ARID1B', 'ARID4A', 'ARMCX1', 'ARMCX2', 'ARMCX3', 'ARNT', 'AR', 'ASF1A', 'ATF2', 'ATM', 'AURKB', 'BCR', 'BDP1', 'BGLAP', 'BRCA1', 'BRF1', 'FAM208A', 'C4BPA', 'CABIN1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CBFB', 'CBX1', 'CBX4', 'CBX5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNT2', 'CDC25A', 'CDC27', 'CDC6', 'CDH1', 'CDK14', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPA', 'CEBPB', 'CEBPD', 'CEBPE', 'CHEK1', 'CHEK2', 'CLNK', 'COL1A1', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUX1', 'DCAF10', 'DGKZ', 'DNAJA3', 'DNMT1', 'DNMT3A', 'DUSP1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EGFR', 'EGF', 'EID1', 'EIF2AK1', 'EIF2AK4', 'AGO2', 'ELF1', 'ENC1', 'EP300', 'ERBB2', 'ESD', 'ESR1', 'ESR2', 'EZH2', 'FBXW7', 'FMO5', 'FOS', 'FOXM1', 'FRK', 'FZR1', 'G6PD', 'GAPDH', 'GATA1', 'GJA1', 'GNB2L1', 'GRB2', 'GSC', 'GTF2H1', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HARS2', 'HARS', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC8', 'HDC', 'HES1', 'HIF1A', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HIST4H4', 'HMGA1', 'HMGA2', 'HRAS', 'HSP90AA1', 'HSPA1A', 'HSPA8', 'ID2', 'IFI16', 'INS', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'KDM2A', 'KDM4A', 'KDM5A', 'KDM5B', 'PPP1R26', 'KIF11', 'KRAS', 'KRT10', 'KRT14', 'KRT5', 'L3MBTL2', 'L3MBTL1', 'LIMD1', 'LIN52', 'LIN54', 'LIN9', 'LMNA', 'LOR', 'LPAR6', 'MAF', 'MAP2K7', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEF2C', 'MORF4L1', 'MRFAP1', 'MRPL11', 'MRPS18B', 'MSH6', 'MTL5', 'MYBL2', 'MYC', 'MYOD1', 'NACC2', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NCR1', 'NDC80', 'NEO1', 'NFYA', 'NFYB', 'NFYC', 'NGF', 'NOTCH1', 'NPM1', 'NRAS', 'ORC1', 'PA2G4', 'PAX2', 'PAX3', 'PAX5', 'PAX6', 'PAX8', 'PCNA', 'PELP1', 'PGR', 'PHB', 'PHF21B', 'PIAS4', 'PIK3CA', 'PIK3R1', 'PIK3R3', 'PLK1', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPIA', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP1R3A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R3B', 'PPRC1', 'PRB1', 'PRB3', 'PRB4', 'PRDM2', 'PRH1', 'PRH2', 'PRIM1', 'PRIM2', 'PRKCB', 'PRMT2', 'PSMA7', 'PSMC1', 'PSMD10', 'PTEN', 'PTGDR', 'RAF1', 'RB1CC1', 'RBAK', 'RBBP4', 'RBBP5', 'RBBP6', 'RBBP7', 'RBBP8', 'RBBP9', 'RBL1', 'RBL2', 'RBFOX2', 'RFC1', 'RPS6KB1', 'RUNX2', 'S100A6', 'SETD1B', 'SETD7', 'SIRT1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMC1A', 'SMC2', 'SMC4', 'SMC5', 'SMYD2', 'SNW1', 'SP100', 'SP1', 'SP3', 'SPI1', 'STAM', 'STAT3', 'SUV39H1', 'SUV420H2', 'SUZ12', 'TAF1', 'TBP', 'TERT', 'TFAP2A', 'TFDP1', 'TFDP3', 'TGM2', 'THAP1', 'TMPO', 'TNS1', 'TOP2A', 'TP53BP1', 'TP53', 'TP73', 'TRDMT1', 'TRIM27', 'TTK', 'UBE2I', 'UBE3A', 'UBL4A', 'UBN1', 'UBR4', 'UBTF', 'UHRF1', 'USP4', 'USP7', 'VEGFA', 'VPS39', 'WDR59', 'WDR73', 'WEE1', 'WWTR1', 'YAP1', 'YY1', 'ZBTB16', 'ZBTB7A', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.8043073491957689 Spearman Correlation: 0.752739189475409 Coefficient of Determination: 0.6469103119703244 RMSE: 0.13898954746172476 NRMSE: 0.06866292242567532 MAPE: 279.3797489508154 Pearson Correlation: 0.12511584270445572 Spearman Correlation: 0.12261250140276066 Coefficient of Determination: -8.482605621513098 RMSE: 0.7401900285273882 NRMSE: 0.3732075653587864 MAPE: 1835.1537016749382 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 5.881776127229412, tolerance: 0.002943482941498817 positive)
Pearson Correlation: 0.7836852906867791 Spearman Correlation: 0.7384360092626053 Coefficient of Determination: 0.614064202903305 RMSE: 0.1453105529181058 NRMSE: 0.07178559398788961 MAPE: 278.2833569173714 Pearson Correlation: 0.10348241059282302 Spearman Correlation: 0.09900622202271851 Coefficient of Determination: -3.4227424560642126 RMSE: 0.5055047153056854 NRMSE: 0.25487804051070195 MAPE: 1520.3610395338633 Predictor: RandomForests Pearson Correlation: 0.6340763493930155 Spearman Correlation: 0.5201141554191631 Coefficient of Determination: 0.19381013396512958 RMSE: 0.21001885728233907 NRMSE: 0.10375246749743806 MAPE: 132.01027999309287 Pearson Correlation: 0.0005679193949936507 Spearman Correlation: 0.12012369231536554 Coefficient of Determination: -0.12763289130124789 RMSE: 0.2552485321927606 NRMSE: 0.12869760411469688 MAPE: 406.3067706836569 Protein: CDH1 Protein Interaction Partners Count: 834 x_train_column_count: 826 x_train columns: ['ABCB1', 'ABCG2', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTR3', 'ACVR1B', 'ADAM10', 'ADAM15', 'ADAM17', 'ADAM9', 'AFP', 'AIMP1', 'AJAP1', 'AKAP9', 'AKT1', 'AKT2', 'AKTIP', 'ALB', 'ALCAM', 'ALDH1A1', 'ALDH3A1', 'ALK', 'AMOTL2', 'ANAPC4', 'ANAPC7', 'ANO1', 'ANXA2', 'ANXA5', 'AP1M1', 'AP1M2', 'APC2', 'APC', 'AQP1', 'AQP5', 'AREG', 'ARF6', 'ARHGAP31', 'ARID1A', 'ARL2BP', 'ARMC7', 'ARPC1A', 'ARPC2', 'ARRB2', 'ARVCF', 'AR', 'CLMP', 'ASF1A', 'ATF2', 'ATF3', 'ATM', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BAG3', 'BANP', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL6B', 'BCL9L', 'BCORL1', 'BMI1', 'BMP2', 'BMP4', 'BMP6', 'BMP7', 'BNIP3', 'BRCA1', 'BRCA2', 'BSG', 'BTBD7', 'BTC', 'BTF3', 'ANAPC15', 'CA2', 'CA9', 'CALCA', 'CALR', 'CAPN1', 'CAPNS1', 'CASP3', 'CASP8', 'CASP9', 'CASS4', 'CAV1', 'CBLL1', 'CBL', 'CBX7', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CCR7', 'CD1A', 'CD1B', 'CD1C', 'CD1E', 'CD207', 'CD24', 'CD274', 'CD276', 'CD2AP', 'CD34', 'CD44', 'CD46', 'CD68', 'CD82', 'CDC16', 'CDC23', 'CDC27', 'CDC42', 'CDC6', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH24', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK14', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN3', 'CDX2', 'CEACAM5', 'CFL1', 'CGN', 'CHGA', 'CHL1', 'CLCA2', 'CLDN1', 'CLDN2', 'CLDN3', 'CLDN4', 'CLDN5', 'CLDN7', 'CNTN1', 'COL1A1', 'CORO1C', 'CRB3', 'CREB1', 'CREBBP', 'CRYAB', 'YBX3', 'CSDC2', 'CSE1L', 'CSF2', 'CSNK2A1', 'CSNK2A2', 'CST5', 'CTBP1', 'CTBP2', 'CTCF', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTSL', 'CTTN', 'CXCL12', 'CXCL1', 'CXCR4', 'CYP1B1', 'DAAM1', 'DAB2IP', 'DACH1', 'DAPK1', 'DAP', 'DDR1', 'DDR2', 'DDX3X', 'DICER1', 'DKK1', 'DLC1', 'DLG1', 'DLG5', 'DNM2', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOT1L', 'DPAGT1', 'DPEP1', 'DSP', 'DUOX1', 'DUSP4', 'DVL1', 'DVL2', 'E2F1', 'ECT2', 'EDN1', 'EFEMP1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'EHD1', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'ELAVL1', 'ELF3', 'ENAH', 'ENG', 'EP300', 'EPB41L3', 'EPCAM', 'EPHA10', 'EPHA1', 'EPHA2', 'EPPK1', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ESRP1', 'ESRP2', 'ETS1', 'ETS2', 'EXOC3', 'EXOC4', 'EYA2', 'EZH2', 'EZR', 'F11R', 'F2RL2', 'SUPT20H', 'FBXL5', 'FER', 'FGF10', 'FGF13', 'FGF17', 'FGF19', 'FGF2', 'FGF4', 'FGF5', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FMN1', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC1', 'FOXC2', 'FOXJ2', 'FOXK2', 'FOXL1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXQ1', 'FRMPD2', 'FSCN1', 'FUT4', 'FXYD5', 'FYN', 'FZD1', 'FZD4', 'FZD7', 'FZR1', 'G6PD', 'GAB2', 'GABPA', 'GADD45A', 'GAPDH', 'GAS6', 'GATA1', 'GATA3', 'GATA4', 'GATA6', 'GDNF', 'GFRA1', 'GGT1', 'GJA1', 'GJB1', 'GJB2', 'GKN2', 'GLI1', 'GLI2', 'GMNN', 'GNA12', 'GNA13', 'GNB2L1', 'GNL3', 'GPA33', 'GRB2', 'GRHL2', 'GRHL3', 'GSK3B', 'GSN', 'GSTP1', 'H2AFZ', 'HAVCR2', 'HBEGF', 'HDAC1', 'HDAC2', 'HEPACAM', 'HES1', 'HGF', 'HGS', 'HIF1A', 'HMGA2', 'HNF4A', 'HOXB4', 'HOXD10', 'HPGDS', 'HPGD', 'HRAS', 'HSP90AA1', 'HSPA5', 'ICAM1', 'ID1', 'ID2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP3', 'IL10', 'IL15', 'IL17A', 'IL1B', 'IL24', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IQSEC1', 'IRS1', 'IRS2', 'ITGA5', 'ITGA6', 'ITGAE', 'ITGAM', 'ITGB1', 'ITGB4', 'ITGB7', 'ITPKB', 'IVL', 'JAG1', 'JAK2', 'AJUBA', 'JUN', 'JUP', 'KDM1A', 'KDM6A', 'KDR', 'KEAP1', 'KIFC3', 'KIT', 'KLF4', 'KLF5', 'KLF8', 'KLK3', 'KLK7', 'KLRG1', 'KRAS', 'KRT10', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'KRT9', 'LAMA1', 'LAMB1', 'LAMC2', 'LASP1', 'LATS1', 'LATS2', 'LCN2', 'LEF1', 'LEP', 'LGALS3', 'LGALS4', 'LGALS9', 'LGR5', 'LIF', 'LIMA1', 'LIN28A', 'LIPG', 'LLGL2', 'LMNA', 'LOR', 'LOXL2', 'LOXL3', 'LOX', 'LRP5', 'LRP6', 'LY6K', 'MACC1', 'MACROD1', 'MAD2L2', 'MAGI1', 'MAP2K1', 'MAP2K7', 'MAP4K5', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARK2', 'MARVELD2', 'MCAM', 'MCL1', 'MDM2', 'MED1', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGAT5', 'MGMT', 'MKI67', 'MLH1', 'MLLT4', 'MME', 'MMP11', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP1', 'MMP25', 'MMP27', 'MMP2', 'MMP3', 'MMP7', 'MMP8', 'MMP9', 'MPP5', 'MRAP', 'MSH2', 'MSN', 'MT1G', 'MTA1', 'MTA3', 'MTBP', 'MTDH', 'MTOR', 'MUC1', 'MUC4', 'MYCN', 'MYC', 'MYH6', 'MYO6', 'MYO7A', 'NANOG', 'NCAM1', 'NCOA1', 'NCSTN', 'NDRG1', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEUROG3', 'NF2', 'NFE2L2', 'NFIC', 'NKD2', 'NKX2-1', 'NKX6-1', 'NKX6-2', 'NME1', 'NOG', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NR2F1', 'NRP2', 'NUDT21', 'NUMBL', 'NUMB', 'NUP98', 'NUTF2', 'OTUB1', 'OVOL1', 'OVOL2', 'PARD3', 'PARD6A', 'PAX2', 'PAX5', 'PAX6', 'PAX8', 'PCSK9', 'PDCD4', 'PDGFRB', 'PDPN', 'PEBP1', 'PECAM1', 'PGR', 'PHLPP1', 'PI3', 'PIK3CA', 'PIK3R1', 'PIP5K1A', 'PIP5K1C', 'PIP', 'PIR', 'PITX1', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAUR', 'PLAU', 'PLCD1', 'PLEKHA7', 'PLG', 'PODXL', 'POLR2C', 'POSTN', 'POTEF', 'POU5F1', 'PPARA', 'PPARGC1A', 'PPARG', 'PPL', 'PPP6C', 'PRAME', 'PRDM10', 'PRKAR1A', 'PRKCA', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRKG1', 'PRMT5', 'PROC', 'PROM1', 'PRSS8', 'PSEN1', 'PTCH1', 'PTEN', 'PTF1A', 'PTGS2', 'PTK2', 'PTPN11', 'PTPN14', 'PTPRC', 'PTPRF', 'PTPRJ', 'PTPRM', 'PTPRS', 'PTPRT', 'PTPRU', 'PTRH2', 'PVRL1', 'PVRL2', 'PVR', 'PXN', 'RAB11A', 'RAB25', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RACGAP1', 'RAF1', 'RALA', 'RALBP1', 'RALGDS', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RARB', 'RASSF1', 'RB1', 'RBM4', 'RCOR1', 'RDX', 'REM1', 'RET', 'RHOA', 'RHOB', 'RHOC', 'RHOD', 'RICTOR', 'RND3', 'ROCK1', 'ROCK2', 'RPS6KB1', 'RPTOR', 'RRM2', 'RUNX2', 'RUNX3', 'S100A14', 'S100A4', 'S100A8', 'SATB1', 'SCRIB', 'SDC1', 'SDC4', 'SDHC', 'SELE', 'SELL', 'SELP', 'SEMA3C', 'SEMA3F', 'SENP1', 'SERPINB4', 'SERPINB5', 'SERPINE1', 'SFN', 'SFRP1', 'SFRP2', 'SFTPC', 'SHH', 'SIK1', 'SIN3A', 'SIRT1', 'SIRT2', 'SIRT4', 'SIRT7', 'SIX1', 'SIX2', 'SKIL', 'SKP2', 'SLC2A1', 'SLC39A6', 'SLC6A3', 'SLC9A3R1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SNAI1', 'SNAI2', 'SNAI3', 'SNX16', 'SNX1', 'SOX10', 'SOX17', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPARC', 'SPDEF', 'SPINT1', 'SPP1', 'SPRY1', 'SRCIN1', 'SRC', 'SRXN1', 'ST14', 'ST7L', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STX4', 'STYK1', 'SUCLG2', 'SUMO1', 'SUZ12', 'SYNJ2', 'SYP', 'TACC3', 'TACSTD2', 'TATDN1', 'TBX1', 'TBX3', 'TCF15', 'TCF4', 'TDGF1', 'TERT', 'TET2', 'TFF1', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBI', 'TGFBR1', 'TGFBR2', 'THBS1', 'THEM4', 'THUMPD1', 'THY1', 'TIAM1', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLN1', 'TLR4', 'TMPRSS2', 'TMPRSS4', 'TNFRSF6B', 'TNF', 'TNK2', 'TNS1', 'TP53BP1', 'TP53BP2', 'TP53', 'TRIM21', 'TRIM29', 'TRIM44', 'TRIP10', 'TRPS1', 'TSPYL2', 'TWIST1', 'TWIST2', 'TYRP1', 'T', 'UBE2I', 'UBE2S', 'USP48', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VEZT', 'VHL', 'VIM', 'VIPAS39', 'VPS33B', 'VTN', 'WASL', 'WDFY2', 'WDTC1', 'WIF1', 'WISP1', 'WISP3', 'WNT10A', 'WNT10B', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT9A', 'WNT9B', 'WT1', 'XIAP', 'YAP1', 'YBX1', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 7.378821871558878e-14 NRMSE: 1.1749342173113718e-14 MAPE: 3.4973108215113877e-11 Pearson Correlation: 0.11775972266176644 Spearman Correlation: 0.19383034701180815 Coefficient of Determination: -6.812649518811126 RMSE: 3.247214840056766 NRMSE: 0.6385744311924576 MAPE: 6955.0872642397135 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.9352411718780184, tolerance: 0.0682205483025332 positive)
Pearson Correlation: 0.9999819116897197 Spearman Correlation: 0.9999358850591727 Coefficient of Determination: 0.9999620777521164 RMSE: 0.006934473635393898 NRMSE: 0.0011041803820569245 MAPE: 2.7974300727724275 Pearson Correlation: 0.18455181664710169 Spearman Correlation: 0.19133156273769 Coefficient of Determination: -7.7585224088594416 RMSE: 3.438169432263762 NRMSE: 0.6761262182186707 MAPE: 6233.784178049553 Predictor: RandomForests Pearson Correlation: 0.788576550081762 Spearman Correlation: 0.7253160999707672 Coefficient of Determination: 0.6162045281612716 RMSE: 0.6976159285262893 NRMSE: 0.11108180130032311 MAPE: 131.10301937609051 Pearson Correlation: 0.6418639317155875 Spearman Correlation: 0.6048379655606679 Coefficient of Determination: 0.40310484279219416 RMSE: 0.8975546056304294 NRMSE: 0.17650677580193694 MAPE: 314.70180366790146 Protein: CDH2 Protein Interaction Partners Count: 472 x_train_column_count: 467 x_train columns: ['ABCG2', 'ABL1', 'ACAN', 'ACTA1', 'ACTA2', 'ACTB', 'ACTR3', 'ADAM10', 'ADH1A', 'AFP', 'AHSG', 'AKT1', 'AKT3', 'ALB', 'ALCAM', 'ALDH1A1', 'AMBN', 'AMELX', 'AMOTL1', 'AMTN', 'ANGPT1', 'ANO8', 'ANXA5', 'APC2', 'APC', 'APLP2', 'APOA1', 'APOA2', 'APOA5', 'APOB', 'APOE', 'APOL1', 'APPL1', 'APP', 'ARHGAP32', 'ARMC7', 'ARPC5', 'ARVCF', 'AR', 'ATXN1', 'AXIN1', 'AXIN2', 'AXL', 'BCL2L1', 'BDNF', 'BMI1', 'BMP15', 'BMP2', 'BMP4', 'BMP7', 'BNIP2', 'BOC', 'BPIFB2', 'RGCC', 'GSKIP', 'C3', 'C4A', 'CABLES1', 'CADM1', 'CALU', 'CASP3', 'CAV1', 'CBLL1', 'CCNA2', 'CCNB1', 'CCND1', 'CD24', 'CD34', 'CD44', 'CD80', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDK4', 'CDK5', 'CDK6', 'CDKN2A', 'CDON', 'CDX2', 'CEBPZ', 'CFL1', 'CHGB', 'CHL1', 'CHRDL1', 'CKAP4', 'CLDN11', 'CLDN3', 'CLDN4', 'CLDN7', 'CORT', 'CP', 'CREBBP', 'CRP', 'CSF1', 'CSK', 'CST3', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNB1', 'CTNND1', 'CTNND2', 'CTTN', 'CXCL12', 'CXCR4', 'CYLD', 'CYR61', 'DBN1', 'DDR1', 'DDR2', 'DKK1', 'DLG4', 'DLG5', 'DMP1', 'DNAJC3', 'DSP', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EFNB2', 'EFNB3', 'EGFR', 'EGF', 'EHMT2', 'EIF2AK3', 'ENAM', 'ENG', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA4', 'EPHB2', 'EPS8', 'ERBB2', 'ERBB4', 'ESR1', 'ESRP1', 'EXOC4', 'EZH2', 'EZR', 'F11R', 'F5', 'EVA1A', 'FAM20A', 'FAM20C', 'FBN1', 'FER', 'FGA', 'FGF13', 'FGF23', 'FGF2', 'FGFR1', 'FGFR4', 'FGG', 'FN1', 'FOXC2', 'FOXD3', 'FOXO1', 'FOXP4', 'FSTL1', 'FSTL3', 'FUCA2', 'GAA', 'GAPDH', 'GAS6', 'GATA4', 'GFAP', 'GJA10', 'GJA1', 'GJA3', 'GJB6', 'GJC1', 'GJC3', 'GJD3', 'GJD4', 'GLI1', 'GOLM1', 'GPC3', 'GRIA1', 'GRIA2', 'HGF', 'HMGA2', 'HNF4A', 'HRAS', 'HRC', 'HSP90B1', 'HSPA5', 'IARS2', 'IGF1R', 'IGF1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL1B', 'IL6', 'CXCL8', 'ILK', 'INADL', 'INS', 'INVS', 'IQGAP1', 'ISL1', 'ITGA6', 'ITGB1', 'ITIH2', 'ITPKB', 'JAG1', 'JAM3', 'JUN', 'JUP', 'KCNA5', 'KDR', 'KIAA2022', 'KIF5B', 'KIT', 'KLF4', 'KNG1', 'KRAS', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT8', 'KTN1', 'L1CAM', 'LAMB1', 'LAMB2', 'LAMC1', 'LEF1', 'LGALS1', 'LRP5', 'LRP6', 'LRRC7', 'LTBP1', 'LTBP3', 'MAP1B', 'MAP2K6', 'MAP2K7', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MATN3', 'MBTPS1', 'MCAM', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEPE', 'MET', 'MFGE8', 'MFI2', 'MGAT4A', 'MIA3', 'MKI67', 'MLLT4', 'MMP14', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MPDZ', 'MPP5', 'MRAP', 'MRPL49', 'MSLN', 'MSN', 'MTHFD1', 'MUC1', 'MUC4', 'MXRA8', 'MYC', 'MYO10', 'MZF1', 'NANOG', 'NCAM1', 'NCSTN', 'NDRG1', 'NENF', 'NES', 'NFASC', 'NGF', 'NKX2-5', 'NLGN1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTUM', 'NRCAM', 'NT5C', 'NT5E', 'NTRK2', 'NUCB1', 'NUMBL', 'NUMB', 'OLFM3', 'P4HB', 'PARD3', 'PAX6', 'PCSK9', 'PC', 'PDGFRB', 'PDIA4', 'PDIA6', 'PECAM1', 'PENK', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PITX2', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PNPLA2', 'POU5F1', 'PPT2', 'PRKCDBP', 'PRKCSH', 'PROC', 'PROM1', 'PRPH', 'PRSS23', 'PSEN1', 'PTEN', 'PTK2', 'PTPN11', 'PTPN1', 'PTPN2', 'PTPRC', 'PTPRS', 'PVRL1', 'PVRL2', 'PVRL3', 'PXN', 'QSOX1', 'RAB11FIP1', 'RAB3D', 'RAB5A', 'RAC1', 'RCN1', 'RELN', 'REM1', 'RHOA', 'RHOB', 'RHOC', 'ROBO1', 'PTBP3', 'RPS6KB1', 'RUNX2', 'S100A14', 'S100A4', 'SARS2', 'SCARB2', 'SCG2', 'SCG3', 'SDC2', 'SEMA3A', 'SENP3', 'SERPINA10', 'SERPINA1', 'SERPINC1', 'SERPIND1', 'SERPINE1', 'SHH', 'SHISA5', 'SIRT7', 'SKP1', 'SLC2A1', 'SLC9A3R1', 'SLIT1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SNAI1', 'SNAI2', 'SNAI3', 'SOX10', 'SOX18', 'SOX1', 'SOX2', 'SOX4', 'SOX9', 'SP7', 'SPAG9', 'SPARCL1', 'SPARC', 'SPP1', 'SPP2', 'SRC', 'ST6GALNAC5', 'STAT3', 'STC2', 'SYP', 'TBX1', 'TCF3', 'TEK', 'TF', 'TGFB1', 'TGFBR1', 'TGM2', 'TGOLN2', 'THY1', 'TIMP1', 'TJP1', 'TJP3', 'TMEM132A', 'TNC', 'TNF', 'TNNT1', 'TP53', 'TRPS1', 'TSC2', 'TWIST1', 'TWIST2', 'USP9X', 'VANGL2', 'VCAM1', 'VCAN', 'VCL', 'VEGFA', 'VGF', 'VIM', 'VTN', 'VWA1', 'WFS1', 'WNT11', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7A', 'XIRP1', 'ZBTB16', 'ZEB1', 'ZEB2', 'ZSCAN1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.9576202102829539 Spearman Correlation: 0.9455075383606956 Coefficient of Determination: 0.9170364671423684 RMSE: 0.10344346315653845 NRMSE: 0.050804706623711234 MAPE: 960.3187939137175 Pearson Correlation: 0.18861470900329394 Spearman Correlation: 0.1565383066352501 Coefficient of Determination: -24.233095416630615 RMSE: 2.095157526056236 NRMSE: 0.7834854163215361 MAPE: 43812.40700344982 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 5.234066431970085, tolerance: 0.0069390679727214565 positive)
Pearson Correlation: 0.9350848867785033 Spearman Correlation: 0.9189887270209198 Coefficient of Determination: 0.8741694381987462 RMSE: 0.12739503452362502 NRMSE: 0.06256816193881685 MAPE: 1606.5708726786795 Pearson Correlation: 0.09113647066636808 Spearman Correlation: 0.09407360948848256 Coefficient of Determination: -11.137829669637547 RMSE: 1.453121523990825 NRMSE: 0.5433956674049044 MAPE: 31507.61888854388 Predictor: RandomForests Pearson Correlation: 0.6021582315836356 Spearman Correlation: 0.5617286652517202 Coefficient of Determination: 0.20085054070881014 RMSE: 0.32105056459340875 NRMSE: 0.15767917322008188 MAPE: 536.6719195525947 Pearson Correlation: 0.10266061103142113 Spearman Correlation: 0.14329622974889847 Coefficient of Determination: -0.007535790577082979 RMSE: 0.4186601816746719 NRMSE: 0.15655822660459282 MAPE: 1426.542024985386 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.5673091310268193 Spearman Correlation: 0.5626739259885083 Coefficient of Determination: 0.3218396501464047 RMSE: 0.1678037765176248 NRMSE: 0.11772729452041926 MAPE: 709.9636165402015 Pearson Correlation: 0.33118611359422395 Spearman Correlation: 0.42593299168318816 Coefficient of Determination: -0.15607735928300026 RMSE: 0.24019355052722663 NRMSE: 0.21670490578878068 MAPE: 496.54759058397406 Predictor: ElasticNet Pearson Correlation: 0.5658065389190262 Spearman Correlation: 0.5618035194132743 Coefficient of Determination: 0.320126033004005 RMSE: 0.16801565119192527 NRMSE: 0.1178759409496024 MAPE: 716.9821704123757 Pearson Correlation: 0.34764970626183433 Spearman Correlation: 0.4344468135512913 Coefficient of Determination: -0.09842051154880438 RMSE: 0.23412738313567374 NRMSE: 0.2112319518722415 MAPE: 473.90521572143507 Predictor: RandomForests Pearson Correlation: 0.5532215556161209 Spearman Correlation: 0.5652630676722618 Coefficient of Determination: 0.26825766681949326 RMSE: 0.17430691798156686 NRMSE: 0.1222897499449731 MAPE: 575.6799278137305 Pearson Correlation: 0.4392656012482198 Spearman Correlation: 0.4789660718961583 Coefficient of Determination: 0.17143896120733582 RMSE: 0.20334343131470894 NRMSE: 0.18345837775034865 MAPE: 212.27010258558812 Protein: PTEN Protein Interaction Partners Count: 884 x_train_column_count: 876 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ABTB1', 'ACTB', 'ACTG1', 'ADM', 'AEBP1', 'AFP', 'AKT1S1', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'AMHR2', 'ANXA2', 'ANXA5', 'APAF1', 'APC', 'ARAF', 'AREG', 'ARHGAP21', 'ARID1A', 'ARID2', 'ARL2BP', 'AR', 'ATF3', 'ATG12', 'ATG5', 'ATG7', 'ATM', 'ATRX', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'AXL', 'BAD', 'BAG5', 'BARD1', 'BAX', 'BBC3', 'BCAR1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BIRC3', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BNIP3', 'BRAF', 'BRCA1', 'BRCA2', 'BRD4', 'BTG2', 'BTK', 'SPRTN', 'CLHC1', 'CA9', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBL', 'CBX7', 'CCL2', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD24', 'CD274', 'CD34', 'CD44', 'CD79A', 'CD79B', 'CDC14A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC7', 'CDH17', 'CDH1', 'CDH2', 'CDIPT', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CENPC', 'CFL1', 'CFLAR', 'CFTR', 'CHD1', 'CHD8', 'CHEK1', 'CHEK2', 'CHKA', 'CHORDC1', 'CHUK', 'CLTCL1', 'CLTC', 'CNOT6L', 'CREB1', 'CREBBP', 'CRP', 'CSF1R', 'CSF1', 'CSK', 'CSN2', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTGF', 'CTLA4', 'CTNNB1', 'CUL1', 'CUL3', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'DAPK1', 'DAXX', 'DBN1', 'DCAF13', 'DDIT4', 'DDR2', 'DECR1', 'DEPTOR', 'DGCR8', 'DICER1', 'DLC1', 'DLG1', 'DLG4', 'DNM1L', 'DNMT1', 'DNMT3A', 'DNMT3B', 'DNTT', 'DOLPP1', 'DUSP1', 'DUSP6', 'DUT', 'DVL1', 'DYRK1A', 'E2F1', 'E2F2', 'E2F3', 'ECSCR', 'EGFR', 'EGF', 'EGR1', 'EIF2AK2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4EBP2', 'EIF4E', 'EIF4G1', 'EML4', 'ENDOG', 'EP300', 'EPCAM', 'EPHA1', 'EPHA2', 'EPHA3', 'EPHA4', 'EPHA5', 'EPHA7', 'EPHB1', 'EPHB2', 'EPHB3', 'EPHB4', 'ERBB2', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ESR1', 'ETS1', 'ETS2', 'ETV1', 'ETV6', 'EYA2', 'EZH2', 'EZR', 'FABP4', 'FASLG', 'FASN', 'FBXW7', 'FCGR1B', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FIG4', 'FKBP1A', 'FLCN', 'FLT1', 'FLT3', 'FLT4', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXG1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FOXP3', 'FRK', 'FYN', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GCK', 'GDF10', 'GDF2', 'GFAP', 'GJA1', 'GLI1', 'GNA11', 'GNAQ', 'GNAS', 'GNRHR', 'GRASP', 'GRB2', 'GRPR', 'GSK3A', 'GSK3B', 'GSTP1', 'H1F0', 'H2AFX', 'HAVCR2', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HES1', 'HGF', 'HIF1A', 'HIST1H2BA', 'HK1', 'HK2', 'HMGA2', 'HNF4A', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA1A', 'HSPA1B', 'HSPA2', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'ID1', 'ID4', 'IDH1', 'IDH2', 'IDO1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL17A', 'IL21', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ILK', 'INPP4A', 'INPP4B', 'INPP5A', 'INPP5B', 'INPP5D', 'INPP5E', 'INPP5F', 'INPP5J', 'INPP5K', 'INPPL1', 'INSRR', 'INSR', 'INS', 'IPMK', 'IPO11', 'IQGAP1', 'IRAK1', 'IRS1', 'IRS2', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'ITPR3', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUN', 'KAT2B', 'KDM5B', 'KDM5C', 'KDM6A', 'KDR', 'KEAP1', 'ATG13', 'KIF11', 'KLLN', 'KITLG', 'KIT', 'KLF17', 'KLF2', 'KLF4', 'KLK3', 'KPNA1', 'KPNA2', 'KPNA5', 'KPNA6', 'KPNA7', 'KRAS', 'KRT14', 'KRT5', 'KRT8', 'LASP1', 'LATS1', 'LATS2', 'LCK', 'LDHA', 'LEF1', 'LEP', 'LGALS3', 'LIG4', 'LOX', 'LRIG1', 'LRP1B', 'LRRK2', 'LYN', 'LYPD1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAN2C1', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K3', 'MAP2K4', 'MAP2K7', 'MAP3K1', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK4', 'MAPK6', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAP1', 'MAPT', 'MARCH2', 'MARCH3', 'MAST1', 'MAST2', 'MAST3', 'MAST4', 'MATK', 'MCL1', 'MCM2', 'MCM7', 'MCRS1', 'MDK', 'MDM2', 'MDM4', 'MECOM', 'MECP2', 'MED12', 'MEN1', 'MET', 'MGMT', 'MINPP1', 'MITF', 'MKI67', 'MKRN1', 'MLH1', 'MLH3', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT1', 'MLST8', 'MME', 'MMP2', 'MMP9', 'MOV10', 'MRAP', 'MRE11A', 'MSH2', 'MSH6', 'MTDH', 'MTMR2', 'MTOR', 'MTSS1', 'MUTYH', 'MVP', 'MYCN', 'MYC', 'MYLK', 'MYOCD', 'NANOG', 'NCKAP1', 'NCOA3', 'NCOR2', 'NDFIP1', 'NDFIP2', 'NDRG1', 'NDRG2', 'NEDD4L', 'NEDD4', 'NES', 'NF1', 'NF2', 'NFATC1', 'NFATC4', 'NFE2L2', 'NFKBIA', 'NGFR', 'NKX3-1', 'NLGN3', 'NLGN4X', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR1H4', 'NR3C2', 'NRAS', 'NRP2', 'NTRK1', 'NTRK2', 'NUMB', 'OCRL', 'OLIG2', 'OTUD3', 'PALB2', 'PARD3', 'PARD6A', 'PARD6B', 'PARD6G', 'PARK2', 'PARK7', 'PARP1', 'PAX8', 'PBK', 'PBRM1', 'PCGF2', 'PCSK9', 'PDCD1', 'PDCD4', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PDK1', 'PDK2', 'PDPK1', 'PDZK1', 'PECAM1', 'PGM3', 'PGR', 'PHF6', 'PHLPP1', 'PHLPP2', 'PI3', 'PI4K2A', 'PI4K2B', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIK3R5', 'PIKFYVE', 'PINK1', 'PIP4K2A', 'PIP4K2B', 'PIP4K2C', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PIP5KL1', 'PKM', 'PLCB1', 'PLCB2', 'PLCB3', 'PLCB4', 'PLCD1', 'PLCD3', 'PLCD4', 'PLCE1', 'PLCG1', 'PLCG2', 'PLCH1', 'PLCH2', 'PLCZ1', 'PLEKHA1', 'PLEK', 'PLK1', 'PLK2', 'PLK3', 'BPIFA1', 'PMAIP1', 'PML', 'PMPCA', 'PMS1', 'PMS2', 'POLE', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPM1D', 'PPP2R1A', 'PPP2R4', 'PPP2R5A', 'PPP2R5E', 'PPP3CA', 'PPP6C', 'PRDX1', 'PREX2', 'PRKAA1', 'PRKAA2', 'PRKCI', 'PRKCZ', 'PRKDC', 'PRMT5', 'PROM1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTER', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPMT1', 'PTPN11', 'PTPN12', 'PTPN13', 'PTPN1', 'PTPRC', 'PTPRD', 'PTS', 'PXN', 'RAB7A', 'RAC1', 'RAC2', 'RAD51C', 'RAD51D', 'RAD51', 'RAD52', 'RAF1', 'RASA1', 'RASSF1', 'RB1CC1', 'RB1', 'RBL1', 'RBL2', 'RBM38', 'RBFOX2', 'RCN1', 'RECK', 'RELA', 'REL', 'REM1', 'RETN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'DROSHA', 'RNF146', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KB1', 'RPS6KB2', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'RRM1', 'RSL1D1', 'RUNX3', 'RWDD3', 'SACM1L', 'SALL4', 'SCAI', 'SCGB1D4', 'SCRIB', 'SDHB', 'SDHC', 'SERPINA1', 'SERPINA4', 'SERPINB5', 'SESN1', 'SESN2', 'SETD2', 'SGK1', 'SGK2', 'SGK3', 'SHANK2', 'SHARPIN', 'SHC1', 'SHFM1', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT5', 'SIRT6', 'SIRT7', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC2A4', 'SLC34A2', 'SLC9A3R1', 'SLC9A3R2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNCA', 'SNX27', 'SOCS1', 'SOCS3', 'SOD2', 'SOS1', 'SOX2', 'SOX4', 'SOX9', 'SP1', 'SPOP', 'SPRY1', 'SPRY2', 'SRBD1', 'SRC', 'SREBF1', 'SRF', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STMN1', 'STUB1', 'STX16', 'SUCLG2', 'SUMO1', 'SYK', 'SYNJ1', 'SYNJ2', 'TACSTD2', 'TBX1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TEP1', 'TERT', 'TET1', 'TGFB1', 'TGFBR1', 'TGFBR2', 'TGM2', 'THBS1', 'TIMP1', 'TIMP3', 'TJP1', 'TLR4', 'TMEM55A', 'TMEM55B', 'TMPRSS2', 'TNFRSF10B', 'TNFSF10', 'TNF', 'TNKS2', 'TNKS', 'TNPO2', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TPM1', 'TRAF6', 'TRIM27', 'TRIM29', 'TSC1', 'TSC2', 'TTN', 'TUT1', 'TWIST1', 'TWSG1', 'TXN', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2E1', 'UBE2I', 'UBE2L3', 'UBE3A', 'ULK1', 'ULK2', 'USP10', 'USP13', 'USP18', 'USP28', 'USP7', 'USP8', 'UTF1', 'UVRAG', 'VCL', 'VDR', 'VEGFA', 'VHL', 'WDR18', 'WDTC1', 'WEE1', 'WIPI1', 'WIPI2', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT9A', 'WNT9B', 'WT1', 'WWP1', 'WWP2', 'XIAP', 'XPO1', 'XPO5', 'YAP1', 'YES1', 'YWHAB', 'YWHAZ', 'YY1', 'ZEB1', 'ZEB2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.3007047617697256e-14 NRMSE: 2.0337811926662898e-15 MAPE: 1.3336886339350691e-11 Pearson Correlation: 0.29131828391602055 Spearman Correlation: 0.3226050200127184 Coefficient of Determination: -4.524410100626653 RMSE: 1.696298940959264 NRMSE: 0.3281296311047787 MAPE: 1558.215289236801 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.5036474687896468, tolerance: 0.017420030134596684 positive)
Pearson Correlation: 0.9999658499044377 Spearman Correlation: 0.9999226305281363 Coefficient of Determination: 0.9999253579546586 RMSE: 0.004916149472386078 NRMSE: 0.0007686888394005282 MAPE: 6.986904386625239 Pearson Correlation: 0.2394067032965762 Spearman Correlation: 0.3067644234965523 Coefficient of Determination: -2.1127613043361366 RMSE: 1.2733047087213445 NRMSE: 0.24630623427757362 MAPE: 1808.5833414332353 Predictor: RandomForests Pearson Correlation: 0.583943117832684 Spearman Correlation: 0.5486244683326287 Coefficient of Determination: 0.2918667854306157 RMSE: 0.4788404119275386 NRMSE: 0.07487145835783576 MAPE: 265.0430365616203 Pearson Correlation: 0.36465827677182217 Spearman Correlation: 0.42090313410669816 Coefficient of Determination: 0.12179672007937525 RMSE: 0.6763273699304017 NRMSE: 0.13082779517378554 MAPE: 389.50128558337383 Protein: BRCA2 Protein Interaction Partners Count: 361 x_train_column_count: 351 x_train columns: ['ABL1', 'ACHE', 'ADRB1', 'ADRB2', 'AKT1', 'ALK', 'APEX1', 'ARID1A', 'ARPC1A', 'AR', 'ATAD5', 'ATM', 'ATRIP', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'B3GALTL', 'BACH1', 'BARD1', 'BCCIP', 'BCHE', 'BDNF', 'BECN1', 'BIRC5', 'BLM', 'BMI1', 'BRCA1', 'BRCC3', 'BRE', 'BRIP1', 'SLX4', 'BUB1B', 'BUB1', 'BUB3', 'SFR1', 'RHNO1', 'RMI2', 'BABAM1', 'MMS22L', 'CASC1', 'CASC5', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCNE1', 'CDC25A', 'CDC25C', 'CDC45', 'CDC6', 'CDH1', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CENPE', 'CENPF', 'CEP55', 'CHEK1', 'CHEK2', 'CHRNA1', 'CLSPN', 'CNTROB', 'CREM', 'CSMD3', 'CTNNB1', 'CYP19A1', 'DMC1', 'DNA2', 'DSN1', 'DYNC1LI2', 'EGFR', 'EGF', 'ELAC2', 'EME1', 'EME2', 'ENAM', 'EPCAM', 'ERBB2', 'ERBB3', 'ERCC1', 'ERCC2', 'ERCC4', 'ERCC5', 'ERCC6', 'ERCC8', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM175A', 'FANCA', 'FANCB', 'FANCC', 'FANCD2', 'FANCE', 'FANCF', 'FANCG', 'FANCI', 'FANCL', 'FANCM', 'FBN1', 'FBXO18', 'FBXW7', 'FEN1', 'FGFR2', 'FHIT', 'FLNA', 'FOXM1', 'GAPDH', 'GEN1', 'SLX1B', 'H2AFX', 'HELQ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HMG20A', 'HMG20B', 'HMMR', 'HNRNPC', 'HOXB13', 'HRAS', 'HUS1', 'ITPKB', 'KAT2B', 'KAT5', 'KEAP1', 'SPIDR', 'KIF23', 'KIF4A', 'KIT', 'KLK3', 'KRAS', 'KRT5', 'LIG1', 'LIG3', 'LIG4', 'LIMD1', 'LSP1', 'MAD2L2', 'MAGED1', 'MAMSTR', 'MAP2K2', 'MAP3K1', 'MCM10', 'MCPH1', 'MDC1', 'MDM2', 'MDM4', 'MEN1', 'MGMT', 'MKI67', 'MLH1', 'MLH3', 'KMT2C', 'MND1', 'MORF4L1', 'MRE11A', 'MRPL36', 'MSH2', 'MSH3', 'MSH4', 'MSH5', 'MSH6', 'MTA2', 'FAN1', 'MUC1', 'MUS81', 'MUTYH', 'MYC', 'NBN', 'NCAPG', 'NEDD4', 'NF1', 'NHEJ1', 'NNT', 'NOTCH1', 'NSL1', 'NSMCE4A', 'OBFC1', 'OGG1', 'PALB2', 'PARG', 'PARP1', 'PARP2', 'PARP3', 'PAXIP1', 'PCNA', 'PDLIM7', 'PDS5A', 'PDS5B', 'PGR', 'PIK3CA', 'PLCB4', 'PLEC', 'PLEKHH1', 'PLK1', 'PMS1', 'PMS2', 'PNOC', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'POLN', 'POLQ', 'PRDM9', 'PRKDC', 'PRSS1', 'PSMC3IP', 'PSMD3', 'PSMD6', 'PTEN', 'RAD17', 'RAD18', 'RAD1', 'RAD21', 'RAD23B', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD52', 'RAD54B', 'RAD54L', 'RAD9A', 'RAD9B', 'RAG2', 'RASSF1', 'RBBP8', 'RBMX', 'RECQL4', 'RECQL5', 'RECQL', 'RET', 'REV1', 'REV3L', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RNF168', 'RNF8', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SKP2', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCAL1', 'SMARCB1', 'SMC1A', 'SMC2', 'SMC3', 'SMC4', 'SMC5', 'SMC6', 'SMUG1', 'SNAI2', 'SP1', 'SPO11', 'STAT5A', 'STK11', 'STRA13', 'SUV39H1', 'SYCP3', 'TBCE', 'TDP1', 'TERT', 'TEX15', 'TMPRSS2', 'TNS1', 'TOP1', 'TOP2A', 'TOP3A', 'TOP3B', 'TOPBP1', 'TOX3', 'TP53BP1', 'TP53', 'TPX2', 'TRIP12', 'PRSS58', 'TTK', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2D1', 'UBE2E2', 'UBE2E3', 'UBE2N', 'UBE2T', 'UIMC1', 'USF1', 'USP11', 'USP15', 'USP1', 'USP21', 'USP4', 'UVRAG', 'VEGFA', 'VWF', 'WDR48', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WTIP', 'XPA', 'XPO1', 'XRCC1', 'XRCC2', 'XRCC3', 'XRCC4', 'XRCC5', 'XRCC6', 'ZFYVE26', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.8240679147120225 Spearman Correlation: 0.7947389600724982 Coefficient of Determination: 0.6790879280578208 RMSE: 0.11356343490033394 NRMSE: 0.0731605314223443 MAPE: 297.74445718178805 Pearson Correlation: -0.14048628212505676 Spearman Correlation: -0.05916532625095077 Coefficient of Determination: -9.140957032059607 RMSE: 0.5289036478889244 NRMSE: 0.6916937787078067 MAPE: 589.8526398955823 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 3.7592876595167684, tolerance: 0.0021620874757223526 positive)
Pearson Correlation: 0.8153333467659979 Spearman Correlation: 0.7842816733045983 Coefficient of Determination: 0.6646895992173747 RMSE: 0.11608310204392565 NRMSE: 0.0747837668184414 MAPE: 258.8107873335315 Pearson Correlation: 0.0007314180896239154 Spearman Correlation: 0.009493883963640447 Coefficient of Determination: -2.4717579037167634 RMSE: 0.3094651919819251 NRMSE: 0.4047148263675212 MAPE: 521.5223124562585 Predictor: RandomForests Pearson Correlation: 0.5967051634387273 Spearman Correlation: 0.5202651014399465 Coefficient of Determination: 0.20324158471494347 RMSE: 0.1789405724108568 NRMSE: 0.11527819127773027 MAPE: 157.09843984941992 Pearson Correlation: 0.27878727461735503 Spearman Correlation: 0.2302846668911084 Coefficient of Determination: -0.0012394713016894432 RMSE: 0.1661904532246455 NRMSE: 0.21734185996814948 MAPE: 162.93063913830878 Protein: CDKN2A Protein Interaction Partners Count: 612 x_train_column_count: 605 x_train columns: ['ABCC1', 'ABL1', 'ACAP1', 'ACAP2', 'ACP5', 'ACTA1', 'ACTB', 'ACTG1', 'ADAMTS9', 'ADAP1', 'AFP', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD12', 'ANXA5', 'AP3D1', 'AP3S1', 'AP3S2', 'APAF1', 'APBA1', 'APBA2', 'ARAP1', 'ARAP2', 'ARF1', 'ARF3', 'ARF4', 'ARF5', 'ARF6', 'ARFGAP1', 'ARFGAP3', 'ARFIP2', 'ARFRP1', 'ARID1A', 'ARID2', 'ARID5B', 'ARL10', 'ARL1', 'ARL2', 'ARL3', 'ARL4A', 'ARL5A', 'AR', 'ASAP1', 'ATM', 'ATRX', 'ATR', 'AURKA', 'AURKB', 'AXIN1', 'BAP1', 'BCL2L11', 'BCL2L1', 'BCL6', 'BECN1', 'BIRC5', 'BMI1', 'BRAF', 'BRCA1', 'BRCA2', 'BUB1B', 'RGCC', 'C1QBP', 'RABL6', 'CACNA1G', 'CADM1', 'CAMK1D', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNL1', 'CD274', 'CD34', 'CD44', 'CDC123', 'CDC20', 'CDC25A', 'CDC25C', 'CDC42', 'CDC45', 'CDC5L', 'CDC6', 'CDC7', 'CDH13', 'CDH17', 'CDH1', 'CDH2', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5RAP3', 'CDK6', 'CDK7', 'CDKAL1', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDX2', 'CEACAM5', 'CEBPB', 'CEBPE', 'CHEK1', 'CHEK2', 'CHFR', 'CHKA', 'COMMD1', 'CRABP1', 'CREBBP', 'CSF1R', 'CSF1', 'CSF2', 'CTBP1', 'CTBP2', 'CTCF', 'CTLA4', 'CTNNB1', 'CTSK', 'CUL1', 'CUL3', 'CXCR4', 'CYCS', 'CYLD', 'CYTH1', 'CYTH2', 'CYTH3', 'DAB2IP', 'DAP', 'DAXX', 'DICER1', 'DIRAS3', 'DLEC1', 'DMTF1', 'DNAH3', 'DNMT1', 'DNMT3A', 'DNMT3B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EBF1', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EHMT2', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EP300', 'EPCAM', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ETS1', 'ETV6', 'EWSR1', 'EZH1', 'EZH2', 'FAT1', 'FBXW7', 'FGF2', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FKBP2', 'FLT3', 'FMN2', 'FN1', 'FOS', 'FOXA1', 'FOXM1', 'FOXN2', 'FOXO1', 'FOXO3', 'FTO', 'FZR1', 'GADD45A', 'GAPDH', 'GATA3', 'GATA4', 'GATA5', 'GBF1', 'GDF15', 'GGA1', 'GGA2', 'GGA3', 'GIT1', 'GIT2', 'GLI1', 'GLTSCR2', 'GMNN', 'GNA11', 'GNAQ', 'GNAS', 'GNL3', 'GOLPH3', 'GP5', 'GSPT1', 'GSTP1', 'H2AFX', 'H2AFZ', 'H3F3A', 'H3F3B', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC9', 'HELLS', 'HGF', 'HHEX', 'HIC1', 'HIF1A', 'HIST1H2BA', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AA3', 'HIST2H2AC', 'HIST2H4A', 'HIST4H4', 'HLTF', 'HMGA2', 'HNF4A', 'HNRNPD', 'HOPX', 'HOXA9', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPA4', 'HSPA9', 'HUWE1', 'ID1', 'IDH1', 'IDH2', 'IGF1R', 'IGF1', 'IGF2BP2', 'IGF2R', 'IGF2', 'IGFBP3', 'IKBKB', 'IKZF1', 'IL10', 'IL2', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING4', 'INS', 'IQSEC1', 'IRS1', 'ISOC2', 'ITGAM', 'JAK1', 'JAK2', 'JAK3', 'JAZF1', 'JUNB', 'JUN', 'KAT2B', 'KAT5', 'KCNJ11', 'KCNQ1', 'KDM1A', 'KDM2B', 'KDM6A', 'KDM6B', 'KDR', 'KEAP1', 'KIAA1549', 'KIT', 'KLF4', 'KRAS', 'KRT19', 'KRT20', 'KRT5', 'KRT7', 'LATS2', 'LOX', 'LRRK2', 'MACROD2', 'MAF', 'MAP2K1', 'MAP2K4', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8', 'MAPK9', 'MAX', 'MC1R', 'MCL1', 'MCM10', 'MCM2', 'MCM5', 'MCM7', 'MDM2', 'MDM4', 'MEN1', 'MEOX1', 'MEOX2', 'MET', 'MGMT', 'MITF', 'MKRN1', 'MLANA', 'MLH1', 'KMT2D', 'KMT2C', 'KMT2B', 'MLLT3', 'MME', 'MMP2', 'MMP7', 'MMP9', 'MOV10', 'MRAS', 'MSH2', 'MSH6', 'MTA1', 'MTAP', 'MTHFR', 'MTNR1B', 'MTOR', 'MUC1', 'MYBL2', 'MYCL', 'MYCN', 'MYC', 'MYOD1', 'KAT6A', 'NANOG', 'NCAM1', 'NCL', 'NCOR1', 'NES', 'NEUROG1', 'NF1', 'NF2', 'NFATC1', 'NFE2L2', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NPM1', 'NRAS', 'NSUN2', 'ORC4', 'ORC5', 'OSBP2', 'P2RY8', 'PA2G4', 'PALB2', 'PARP1', 'PAX3', 'PAX5', 'PAX8', 'PBRM1', 'PCGF2', 'PDGFB', 'PDGFRA', 'PDGFRB', 'PEX19', 'PGR', 'PHLDB1', 'PI3', 'PIAS2', 'PIGF', 'PIK3CA', 'PIK3R1', 'PIP4K2A', 'PLEKHA3', 'PLEKHA8', 'PLEK', 'PLK1', 'PMAIP1', 'PML', 'PMS2', 'POTEF', 'POU5F1', 'PPARA', 'PPARG', 'PPM1D', 'PPP1R9B', 'PPP3CA', 'PRDM2', 'PRMT6', 'PROM1', 'PRSS1', 'PSMC3', 'PSMD10', 'PSME3', 'PTCH1', 'PTEN', 'PTER', 'PTF1A', 'PTGS2', 'PTPN11', 'PTPRC', 'PTPRD', 'PXN', 'RAB11A', 'RAB5A', 'RABEP1', 'RABGEF1', 'RAC2', 'RAD51', 'RAF1', 'RAP2B', 'RARB', 'RASSF1', 'RASSF2', 'RB1', 'RBL1', 'RBL2', 'RCC1', 'RELA', 'RELB', 'REL', 'RET', 'RHOA', 'DROSHA', 'RNF2', 'RNF43', 'ROS1', 'RPL11', 'RPRM', 'RPS27A', 'RPS6KB1', 'RRAS2', 'RRAS', 'RTEL1', 'RUNX2', 'RUNX3', 'SDHC', 'SENP1', 'SENP3', 'SERPINE1', 'SERTAD1', 'SETD2', 'SFN', 'SFRP1', 'SFRP2', 'SHH', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SIX2', 'SKP2', 'SLC30A8', 'SMAD2', 'SMAD3', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMUG1', 'SNAI1', 'SNAI2', 'SNCA', 'SOCS1', 'SOX2', 'SP1', 'SPEN', 'SRC', 'STAT1', 'STAT3', 'STK11', 'STK25', 'STK33', 'STMN1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUV39H1', 'SUZ12', 'SYNE1', 'SYP', 'TBL1XR1', 'TBRG1', 'TBX2', 'TBX3', 'TCF7L2', 'TCHP', 'TERT', 'TET2', 'TFDP1', 'TFPI2', 'TGFBR2', 'THADA', 'THBS1', 'TIMP3', 'TMCO1', 'TMEM115', 'TNFRSF10B', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TRADD', 'TRIM28', 'TRIP12', 'PRSS58', 'TSC2', 'TSPAN8', 'TTF1', 'TWIST1', 'TWSG1', 'TYR', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2I', 'UBE3A', 'UCHL1', 'USP7', 'UTF1', 'VEGFA', 'VHL', 'WDTC1', 'WEE1', 'WFS1', 'WHSC1', 'WIF1', 'WRN', 'WT1', 'WWOX', 'XRCC1', 'YY1', 'ZBTB17', 'ZBTB7A', 'ZEB1', 'ZFP91', 'ZNF148', 'ZNF217', 'ZNF227', 'ZNF410', 'ZNF420', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 7.827072084612214e-14 NRMSE: 1.9930921251336135e-14 MAPE: 3.7981698110277334e-11 Pearson Correlation: 0.06694140577451058 Spearman Correlation: 0.10904624745944463 Coefficient of Determination: -33.85666767773674 RMSE: 3.5774975856396756 NRMSE: 0.900203212208972 MAPE: 2912.7479577421173 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 1.8935786168025364, tolerance: 0.024854257731250624 positive)
Pearson Correlation: 0.9976913297356014 Spearman Correlation: 0.9964993396430808 Coefficient of Determination: 0.995333898923182 RMSE: 0.04642867951865225 NRMSE: 0.011822637447137137 MAPE: 53.39948338953676 Pearson Correlation: 0.14726298630833887 Spearman Correlation: 0.1912517612439058 Coefficient of Determination: -11.306948330113519 RMSE: 2.125747147670349 NRMSE: 0.5349002661408492 MAPE: 2095.728946034675 Predictor: RandomForests Pearson Correlation: 0.7129606556304533 Spearman Correlation: 0.634889099049554 Coefficient of Determination: 0.5031252242250144 RMSE: 0.4791072424451144 NRMSE: 0.12200026544908824 MAPE: 183.28052453077407 Pearson Correlation: 0.37242994363311455 Spearman Correlation: 0.36588353809698415 Coefficient of Determination: -0.05028040350463403 RMSE: 0.6209963500124829 NRMSE: 0.15626087667962127 MAPE: 454.1511108229819 Protein: TP53 Protein Interaction Partners Count: 1000 x_train_column_count: 991 x_train columns: ['ABCB1', 'ABCC1', 'ABL1', 'ACTB', 'ACTL6A', 'ADAM17', 'AFP', 'AGT', 'AICDA', 'AIFM2', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALK', 'ANKRD2', 'ANXA1', 'ANXA2', 'ANXA5', 'APAF1', 'APBB1', 'APC', 'APEX1', 'APOBEC3B', 'APP', 'ARID1A', 'ARID3A', 'AR', 'ASF1A', 'ASXL1', 'ATF2', 'ATF3', 'ATG7', 'ATM', 'ATN1', 'ATRIP', 'ATRX', 'ATR', 'ATXN3', 'AURKA', 'AURKB', 'AXIN1', 'AXL', 'BACE1', 'BAG1', 'BAG2', 'BAIAP2L1', 'BAK1', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2A1', 'BCL2L11', 'BCL2L12', 'BCL2L14', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL6', 'BCR', 'BDNF', 'BECN1', 'BID', 'BIRC3', 'BIRC5', 'BIRC6', 'BLM', 'BMF', 'BMI1', 'BMX', 'BNIP3L', 'BNIP3', 'BRCA1', 'BRCA2', 'BRCC3', 'BRD1', 'BRD4', 'BRD7', 'BRE', 'BRIP1', 'BRPF1', 'BRPF3', 'BTG2', 'BTK', 'BUB1B', 'BUB1', 'RHNO1', 'RGCC', 'RMI2', 'CNOT11', 'SETD9', 'CA9', 'CABIN1', 'CABLES1', 'CAPN1', 'CARM1', 'CASP10', 'CASP1', 'CASP2', 'CASP3', 'CASP6', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBX2', 'CBX4', 'CBX6', 'CBX8', 'CCDC106', 'CCL2', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CCNG1', 'CCNG2', 'CCNH', 'CCNK', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CD24', 'CD274', 'CD34', 'CD40LG', 'CD40', 'CD44', 'CD82', 'CDC20', 'CDC25A', 'CDC25C', 'CDH17', 'CDH1', 'CDK12', 'CDK13', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CEACAM5', 'CEBPB', 'CENPJ', 'CFL1', 'CFLAR', 'CHD3', 'CHD4', 'CHD8', 'CHEK1', 'CHEK2', 'CHUK', 'CISH', 'CITED2', 'CLSPN', 'CLU', 'CNOT10', 'CNOT1', 'CNOT2', 'CNOT3', 'CNOT4', 'CNOT6L', 'CNOT6', 'CNOT7', 'CNOT8', 'COPS5', 'CREB1', 'CREBBP', 'CRYAB', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK1G1', 'CSNK1G2', 'CSNK1G3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTCF', 'CTGF', 'CTNNB1', 'CUL4A', 'CUL7', 'CUL9', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP1A1', 'DACH1', 'DAPK1', 'DAP', 'DAXX', 'DDB1', 'DDB2', 'DDIT4', 'DDX17', 'DDX3X', 'DDX5', 'DECR1', 'DGCR8', 'DHCR24', 'DHFR', 'DIABLO', 'DICER1', 'DKK1', 'DMTF1', 'DNA2', 'DNAJA3', 'DNAJB1', 'DNMT1', 'DNMT3A', 'DNTT', 'DPYD', 'DRAM1', 'DTL', 'DUSP1', 'DUSP2', 'DYRK1A', 'DYRK2', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F7', 'E2F8', 'E4F1', 'EED', 'EEF1A1', 'EEF1A2', 'EGFR', 'EGF', 'EGR1', 'EHMT1', 'EHMT2', 'EI24', 'EIF2AK2', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF4EBP1', 'ELANE', 'ELAVL1', 'ELL3', 'ELL', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHA3', 'EPHB2', 'ERBB2', 'ERBB4', 'ERCC1', 'ERCC2', 'ERCC3', 'ERCC6', 'ESR1', 'ETS1', 'ETS2', 'EWSR1', 'EXO1', 'EZH2', 'F2', 'FADD', 'AMER1', 'FAM175B', 'FANCC', 'FANCD2', 'FASLG', 'FAS', 'FBL', 'FBXO11', 'FBXO4', 'FBXW7', 'FGF1', 'FGF2', 'FGFR3', 'FHIT', 'FHL2', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FSCN1', 'FUT4', 'FZR1', 'G3BP1', 'G6PD', 'GADD45A', 'GADD45B', 'GADD45G', 'GAPDH', 'GATAD2A', 'GATAD2B', 'GDF15', 'GFI1', 'GLS2', 'GLTSCR2', 'GNL3', 'GRAMD4', 'GRB10', 'GRB14', 'GSK3B', 'GSTP1', 'GTF2H1', 'GTSE1', 'H1F0', 'H2AFX', 'HAMP', 'HCK', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC5', 'HDAC7', 'HDAC8', 'HDAC9', 'HERC5', 'HIC1', 'HIF1A', 'HIPK1', 'HIPK2', 'HIPK3', 'HIPK4', 'HIRA', 'HIST1H1A', 'HIST1H1B', 'HIST1H1C', 'HIST1H1D', 'HIST1H1E', 'HK2', 'HMGA1', 'HMGA2', 'HMGB1', 'HMGB2', 'HMMR', 'HMOX1', 'HNF4A', 'HNRNPK', 'HNRNPL', 'HOXA5', 'HPGDS', 'HRAS', 'HSF1', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA1A', 'HSPA1B', 'HSPA1L', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPA9', 'HSPB1', 'HSPB2', 'HTT', 'HUS1', 'HUWE1', 'ICAM1', 'ID2', 'ID4', 'IDH1', 'IDH2', 'IFI16', 'IFNAR1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IGFBP7', 'IKBKB', 'IL17A', 'IL4', 'IL6', 'CXCL8', 'ING1', 'ING2', 'ING3', 'ING4', 'ING5', 'INSIG1', 'INS', 'IRF1', 'ISG15', 'ITPKB', 'JAG1', 'JAK2', 'JMY', 'JUN', 'KAT2A', 'KAT2B', 'KAT5', 'KDM1A', 'KDM6A', 'KDM6B', 'KDR', 'KHDRBS1', 'CCAR2', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KPNA2', 'KRAS', 'KRT14', 'KRT17', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'L3MBTL1', 'LAMA4', 'LEP', 'LGALS7B', 'LGALS7', 'LIF', 'LIG4', 'LIN28A', 'PIDD1', 'LRRK2', 'LYN', 'MAF1', 'MAF', 'MAGEA2', 'MAP1LC3B', 'MAP2K1', 'MAP2K3', 'MAP2K7', 'MAP3K1', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MBD3', 'MCL1', 'MCM7', 'MDC1', 'MDH1', 'MDM2', 'MDM4', 'MEAF6', 'MECOM', 'MELK', 'MET', 'MGMT', 'MIF', 'MKI67', 'MKRN1', 'MLH1', 'KMT2D', 'KMT2C', 'MMP13', 'MMP1', 'MMP2', 'MMP9', 'MOV10', 'MRE11A', 'MSH2', 'MSH6', 'MSX1', 'MT1A', 'MT2A', 'MTA1', 'MTA2', 'MTA3', 'MTOR', 'MUC1', 'MUTYH', 'MYBBP1A', 'MYB', 'MYCN', 'MYC', 'MYOCD', 'KAT8', 'KAT6A', 'NANOG', 'NBN', 'NCL', 'NCOA3', 'NCOR1', 'NCOR2', 'NDN', 'NDRG1', 'NEDD8', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFE2L2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NFKBIB', 'NFYA', 'NFYB', 'NFYC', 'NGFR', 'NKX2-1', 'NLK', 'NLRC4', 'NME1', 'NOC2L', 'NOS3', 'NOTCH1', 'NOTCH3', 'NOTCH4', 'NOX4', 'NPM1', 'NQO1', 'NR1I2', 'NR2E1', 'NR3C1', 'NR4A1', 'NR4A2', 'NRAS', 'NUAK1', 'NUMB', 'NUPR1', 'OGG1', 'OLIG2', 'OPN1SW', 'OSGIN1', 'OTUB1', 'OTUB2', 'OTUD5', 'PADI4', 'PALB2', 'PARK2', 'PARK7', 'PARP1', 'PATZ1', 'PAX2', 'PAX3', 'PAX8', 'PBK', 'PBRM1', 'PCBP4', 'PCNA', 'PDCD4', 'PDCD5', 'PDGFRA', 'PDGFRB', 'PDLIM7', 'PER2', 'PERP', 'PGR', 'PHB', 'PHC1', 'PHC2', 'PHC3', 'PHF20', 'PHGDH', 'PI3', 'PIAS1', 'PIAS2', 'PIAS4', 'PIK3CA', 'PIN1', 'PKM', 'PLAGL1', 'PLAU', 'PLK1', 'PLK2', 'PLK3', 'PLK4', 'PMAIP1', 'PML', 'PMS2', 'POLI', 'POLK', 'POU4F1', 'POU4F2', 'POU5F1', 'PPARGC1A', 'PPARG', 'PPIF', 'PPM1D', 'PPP1R13B', 'PPP1R13L', 'PPP1R15A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R4', 'PPP2R5C', 'PRDM1', 'PRDM2', 'PRDX1', 'PRELID1', 'PRIMA1', 'PRKAA1', 'PRKAA2', 'PRKAB1', 'PRKAB2', 'PRKAG1', 'PRKAG2', 'PRKAG3', 'PRKCA', 'PRKCD', 'PRKCZ', 'PRKD1', 'PRKDC', 'PRKG1', 'PRMT1', 'PRMT5', 'PROM1', 'PSEN1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTBP1', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2', 'PTTG1', 'RABGGTA', 'RABGGTB', 'RAD17', 'RAD1', 'RAD50', 'RAD51', 'RAD9A', 'RAD9B', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP4', 'RBBP6', 'RBBP7', 'RBBP8', 'RBL1', 'RBL2', 'RBM38', 'RBPJ', 'RCHY1', 'RCOR1', 'RECQL4', 'RELA', 'REM1', 'REST', 'RET', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RFFL', 'RFWD2', 'RING1', 'RMI1', 'DROSHA', 'RNF20', 'RNF2', 'RNF34', 'RNF43', 'ROCK1', 'RPA1', 'RPA2', 'RPA3', 'RPL11', 'RPL22', 'RPL26', 'RPL5', 'RPRM', 'RPS14', 'RPS19', 'RPS27A', 'RPS27L', 'RPS3', 'RPS6KB1', 'RQCD1', 'RRAD', 'RRM2B', 'RRM2', 'RUNX2', 'RUNX3', 'S100A2', 'S100A4', 'S100A6', 'S100B', 'SALL4', 'SCO2', 'SDHC', 'SENP1', 'SENP3', 'SERPINB5', 'SERPINE1', 'SESN1', 'SESN2', 'SESN3', 'SETD2', 'SETD7', 'SETD8', 'SETDB1', 'SFN', 'SRSF1', 'SGK1', 'SHFM1', 'SHH', 'SHISA5', 'SIK1', 'SIN3A', 'SIN3B', 'SIRT1', 'SIRT2', 'SIRT3', 'SIRT4', 'SIRT5', 'SIRT6', 'SIRT7', 'SIVA1', 'SKP2', 'SLC2A14', 'SLC2A1', 'SLC2A2', 'SLC2A3', 'SLC6A6', 'SLMO1', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMG1', 'SMG7', 'SMYD2', 'SNAI1', 'SNAI2', 'SOCS1', 'SOCS3', 'SOD2', 'SORT1', 'SOX2', 'SOX4', 'SP100', 'SP1', 'SP3', 'SP7', 'SPATA18', 'SPP1', 'SQSTM1', 'SRC', 'SREBF1', 'SREBF2', 'SSRP1', 'STAT1', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STEAP3', 'STK11', 'STMN1', 'STUB1', 'SUB1', 'SUMO1', 'SUMO2', 'SUMO3', 'SUMO4', 'SUPT16H', 'SUV39H1', 'SUZ12', 'SYK', 'SYP', 'TADA3', 'TAF10', 'TAF11', 'TAF12', 'TAF13', 'TAF15', 'TAF1L', 'TAF1', 'TAF2', 'TAF3', 'TAF4B', 'TAF4', 'TAF5', 'TAF6', 'TAF7L', 'TAF7', 'TAF9B', 'TBPL1', 'TBPL2', 'TBP', 'TCHP', 'TCP1', 'TDG', 'TERT', 'TET2', 'TFAM', 'TFAP2A', 'TFAP2C', 'TFDP1', 'TFF1', 'TGFB1', 'TGM2', 'THBS1', 'TIMP3', 'TLR3', 'TLR9', 'TMEM219', 'TNFAIP3', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF10C', 'TNFRSF10D', 'TNF', 'TNK2', 'TNKS1BP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOE1', 'TOP1', 'TOP2A', 'TOP3A', 'TOPBP1', 'TOPORS', 'TP53AIP1', 'TP53BP1', 'TP53BP2', 'TP53I3', 'TP53INP1', 'TP53RK', 'TP63', 'TP73', 'TPT1', 'TPX2', 'TRAF6', 'TRIAP1', 'TRIM24', 'TRIM28', 'TRIM29', 'TRIM32', 'TRIM59', 'TRIM8', 'TRRAP', 'TSC2', 'TTC5', 'TTK', 'TWIST1', 'TWIST2', 'TXN', 'TYMS', 'UBA1', 'UBA52', 'UBB', 'UBC', 'UBE2A', 'UBE2D1', 'UBE2E1', 'UBE2I', 'UBE2K', 'UBE2N', 'UBE2Q1', 'UBE2S', 'UBE3A', 'UBN1', 'UCHL1', 'UHRF1', 'USF1', 'USP10', 'USP15', 'USP24', 'USP3', 'USP42', 'USP7', 'UTP14A', 'VEGFA', 'VHL', 'VPRBP', 'VRK1', 'WDTC1', 'WEE1', 'WRN', 'WT1', 'WWOX', 'XAF1', 'XIAP', 'XPA', 'XPO1', 'XRCC1', 'XRCC5', 'XRCC6', 'YBX1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'YY1', 'YY2', 'ZBTB33', 'ZBTB7A', 'ZEB1', 'ZEB2', 'ZKSCAN4', 'ZNF148', 'ZNF274', 'ZNF385A', 'ZNF420', 'ZNF668', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.0466022470456042e-14 NRMSE: 2.6618231568595445e-15 MAPE: 3.286331403466622e-11 Pearson Correlation: 0.12347883247437942 Spearman Correlation: 0.16503198294243074 Coefficient of Determination: -2.8252734198154617 RMSE: 1.0329637097907183 NRMSE: 0.2766743564458868 MAPE: 912.8130964340904 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.26707874940057263, tolerance: 0.009662504276089433 positive)
Pearson Correlation: 0.9999739386877914 Spearman Correlation: 0.9999364244877614 Coefficient of Determination: 0.9999411662259337 RMSE: 0.003250626458051657 NRMSE: 0.0008267317220813493 MAPE: 8.368090186179224 Pearson Correlation: 0.28866974472540957 Spearman Correlation: 0.2552625344455667 Coefficient of Determination: -1.2524312992381685 RMSE: 0.7926465971094354 NRMSE: 0.2123065748250798 MAPE: 712.2709984808861 Predictor: RandomForests Pearson Correlation: 0.6473419135768366 Spearman Correlation: 0.5829555053484536 Coefficient of Determination: 0.3686496893514176 RMSE: 0.3367355055168576 NRMSE: 0.08564193024157726 MAPE: 809.5838682394865 Pearson Correlation: 0.5088654518041784 Spearman Correlation: 0.44548435766032 Coefficient of Determination: 0.2238460603250575 RMSE: 0.4652943252108043 NRMSE: 0.12462684484017794 MAPE: 142.51385308320772 Protein: CTNNB1 Protein Interaction Partners Count: 992 x_train_column_count: 984 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACAN', 'ACP1', 'ACTA1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTN1', 'ACTN4', 'ACVR1B', 'ACVR1', 'ADAM10', 'ADCY7', 'ADIPOQ', 'AES', 'AFP', 'AHI1', 'AHR', 'AHSA1', 'AJAP1', 'AK9', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDH1A1', 'ALK', 'ALPL', 'AMHR2', 'AMH', 'ANXA5', 'AP1M1', 'APC2', 'APCS', 'APC', 'APH1A', 'APH1B', 'AQP1', 'ARHGAP10', 'ARHGAP21', 'ARHGAP32', 'ARHGEF4', 'ARID1A', 'ARID2', 'ARMC7', 'ARMC8', 'ARVCF', 'ARX', 'AR', 'ASCL1', 'ASF1A', 'ASH2L', 'ASIP', 'ATF4', 'ATM', 'AURKA', 'AXIN1', 'AXIN2', 'BAG3', 'BCAR1', 'BCL2L1', 'BCL3', 'BCL6', 'BCL9L', 'BCL9', 'BDNF', 'BGLAP', 'BIRC5', 'BMI1', 'BMP2', 'BMP4', 'BMP7', 'BMPR1A', 'BMPR1B', 'BNIP2', 'BRAF', 'BRCA1', 'BRCA2', 'BRMS1L', 'BTRC', 'HILPDA', 'AK8', 'CA2', 'CA9', 'CABLES1', 'CACYBP', 'CALM1', 'CALM3', 'CARM1', 'CASP3', 'CASP8', 'CASP9', 'CAV1', 'CBLL1', 'CBL', 'CBY1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCNE1', 'CD24', 'CD34', 'CD40', 'CD44', 'CDC27', 'CDC42', 'CDC73', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH16', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH26', 'CDH2', 'CDH3', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CDHR5', 'CDK12', 'CDK1', 'CDK2', 'CDK4', 'CDK5R1', 'CDK5', 'CDK6', 'CDK8', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDON', 'CDX1', 'CDX2', 'CEBPA', 'CHD8', 'CHRD', 'CHUK', 'CITED1', 'CKAP5', 'CLCA1', 'CLDN3', 'CLDN5', 'COL1A1', 'COPS3', 'COPS5', 'COPS6', 'CREB1', 'CREBBP', 'CRKL', 'CRK', 'CRP', 'CRYAB', 'CSNK1A1L', 'CSNK1A1', 'CSNK1D', 'CSNK1E', 'CSNK2A3', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'CTBP1', 'CTGF', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNAL1', 'CTNNBIP1', 'CTNND1', 'CTNND2', 'CTTN', 'CUL1', 'CUL4A', 'CUL4B', 'CXCR4', 'CXXC4', 'DAB2', 'DACT1', 'DACT2', 'DACT3', 'DCT', 'DCX', 'DDB1', 'DDX39A', 'DDX3X', 'DDX5', 'DHODH', 'DHX9', 'DKK1', 'DKK2', 'DKK3', 'DKK4', 'DLG1', 'DLG2', 'DLG4', 'DLG5', 'DLGAP1', 'DLL4', 'DLX1', 'DNM2', 'DNMT1', 'DPYD', 'DSC1', 'DSC2', 'DSC3', 'DSG1', 'DSG2', 'DSG3', 'DSG4', 'DSP', 'DUSP6', 'DVL1', 'DVL2', 'DVL3', 'E2F3', 'ECM1', 'EFNA1', 'EGFR', 'EGF', 'EGR1', 'ELAVL1', 'EMD', 'ENAH', 'EP300', 'EP400', 'EPCAM', 'EPHA2', 'EPHB2', 'EPHB3', 'ERBB2IP', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EXOC3', 'EXOC4', 'EYA4', 'EZH2', 'EZR', 'F2RL2', 'FAF1', 'AMER1', 'FANCA', 'FASLG', 'FAS', 'FAT1', 'FAT4', 'FBXW11', 'FBXW7', 'FERMT2', 'FER', 'FGF10', 'FGF13', 'FGF2', 'FGF3', 'FGF4', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FHIT', 'FHL2', 'FLG', 'FLOT1', 'FLOT2', 'FLT1', 'FLT3', 'FMN1', 'FMR1', 'FN1', 'FOS', 'FOXA1', 'FOXA2', 'FOXC2', 'FOXG1', 'FOXL1', 'FOXL2', 'FOXM1', 'FOXN3', 'FOXO1', 'FOXO3', 'FOXO4', 'FOXP1', 'FRAT1', 'FRAT2', 'FRZB', 'FSCN1', 'FSTL1', 'FSTL3', 'FURIN', 'FUS', 'FXR1', 'FYN', 'FZD10', 'FZD1', 'FZD2', 'FZD3', 'FZD4', 'FZD5', 'FZD6', 'FZD7', 'FZD8', 'FZD9', 'GAPDH', 'GATA2', 'GATA4', 'GCG', 'GDF2', 'GDNF', 'GFRA1', 'GJA1', 'GLI1', 'GLI2', 'GLI3', 'GLIS2', 'GLUL', 'GNA11', 'GNA12', 'GNA13', 'GNAQ', 'GNAS', 'GPC3', 'GRIA2', 'GRIP1', 'GSK3A', 'GSK3B', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HAS2', 'HBP1', 'HDAC1', 'HDAC2', 'HDAC4', 'HDAC6', 'HDAC7', 'HERC5', 'HES7', 'HGF', 'HGS', 'HHEX', 'HIC1', 'HIF1A', 'HINT1', 'HIPK2', 'HIST1H1C', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2AC', 'HIST2H2BE', 'HIST3H3', 'HMGB1', 'HNF1A', 'HNF4A', 'HNRNPA1', 'HNRNPA2B1', 'HNRNPK', 'HNRNPM', 'HOXA10', 'HOXB4', 'HPGD', 'HRAS', 'HSP90AB1', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPD1', 'HTRA1', 'HTT', 'HUWE1', 'IBSP', 'IDH1', 'IDH2', 'IFNB1', 'IFRD1', 'IGF1R', 'IGF1', 'IGF2BP1', 'IGF2', 'IGFBP4', 'IHH', 'IKBKB', 'IL6', 'CXCL8', 'ILK', 'INS', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'IRF3', 'ISG15', 'ISL1', 'ITGAE', 'ITGB1', 'ITGB7', 'ITK', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'AJUBA', 'JUN', 'JUP', 'KANK1', 'KAT2A', 'KAT2B', 'KAT5', 'KCNN1', 'KCTD1', 'KDM1A', 'KDR', 'KIF18B', 'KIF3A', 'KIF5B', 'KIFC3', 'KIT', 'KLF2', 'KLF4', 'KLF5', 'KRAS', 'KREMEN1', 'KRIT1', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LATS2', 'LDB1', 'LDHB', 'LDLR', 'LEF1', 'LEO1', 'LGR4', 'LGR5', 'LGR6', 'LHCGR', 'LHX8', 'LIF', 'LIMA1', 'LMNA', 'LMNB1', 'LOX', 'LRP4', 'LRP5L', 'LRP5', 'LRP6', 'LRRFIP1', 'LRRK2', 'LZTFL1', 'MACF1', 'MAGI1', 'MAGI2', 'MAGI3', 'MAP1LC3B', 'MAP2K1', 'MAP2K2', 'MAP2K6', 'MAP2K7', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK8IP1', 'MAPK8', 'MAPK9', 'MDFIC', 'MDFI', 'MDK', 'MDM2', 'MED12', 'MED1', 'MEF2A', 'MEF2C', 'MEF2D', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'KMT2D', 'MLLT10', 'MLLT11', 'MLLT4', 'MLLT6', 'KMT2A', 'MME', 'MMP13', 'MMP14', 'MMP15', 'MMP17', 'MMP25', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MRAP', 'MSH2', 'MSH6', 'MSN', 'MSX1', 'MSX2', 'MTDH', 'MTOR', 'MUC13', 'MUC1', 'MUTYH', 'MYCN', 'MYC', 'MYF5', 'MYO1D', 'MYO6', 'MYO7A', 'MYOD1', 'MYOG', 'NANOG', 'NCAM1', 'NCCRP1', 'NCOA2', 'NCSTN', 'NDP', 'NDRG2', 'NEDD9', 'NEK2', 'NES', 'NEURL2', 'NF1', 'NF2', 'NFAT5', 'NFKB1', 'NIT1', 'NKD1', 'NKX2-5', 'NLK', 'NME1', 'NOG', 'NONO', 'NOS3', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NPM1', 'NR0B1', 'NR4A1', 'NR4A2', 'NR5A1', 'NR5A2', 'NRAS', 'NRIP1', 'NTRK1', 'NTRK2', 'NTRK3', 'NUDT5', 'NUMB', 'NUP153', 'NUTF2', 'OTX2', 'PAK1', 'PAK2', 'PAK3', 'PANK4', 'PARD3', 'PARD6A', 'PARK2', 'PARP1', 'PAX3', 'PAX6', 'PAX7', 'PAX8', 'PDGFRA', 'PDGFRB', 'PECAM1', 'PGK1', 'PGR', 'PHB', 'JADE1', 'PI3', 'PICK1', 'PIK3CA', 'PIK3R1', 'PIK3R2', 'PIN1', 'PIP5K1A', 'PIP5K1C', 'PITX2', 'PKD1', 'PKM', 'PKP1', 'PKP2', 'PKP3', 'PKP4', 'PLAG1', 'PLEKHA7', 'PLK1', 'PML', 'PMS2', 'POLE', 'PORCN', 'POTEF', 'POU5F1', 'PPARD', 'PPARG', 'PPM1A', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R1B', 'PPP2R2B', 'PPP2R5A', 'PPP2R5B', 'PPP2R5C', 'PPP2R5D', 'PPP2R5E', 'PRKACA', 'PRKACB', 'PRKACG', 'PRKAR1A', 'PRKCA', 'PRKCG', 'PRKCI', 'PRKCZ', 'PRKD1', 'PRL', 'PRMT1', 'PROC', 'PROM1', 'PROP1', 'PSEN1', 'PSEN2', 'PSENEN', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTEN', 'PTGES3', 'PTGS2', 'PTH1R', 'PTH', 'PTK2', 'PTK7', 'PTMA', 'PTN', 'PTPN11', 'PTPN13', 'PTPN1', 'PTPN6', 'PTPRB', 'PTPRC', 'PTPRF', 'PTPRG', 'PTPRJ', 'PTPRK', 'PTPRM', 'PTPRU', 'PTPRZ1', 'PVRL1', 'PVRL2', 'PXN', 'PYGO1', 'PYGO2', 'RAB5A', 'RAB7A', 'RAB8B', 'RAC1', 'RAC2', 'RALGDS', 'RANBP3', 'RAP1A', 'RAP1B', 'RAPGEF1', 'RAPGEF2', 'RAPGEF6', 'RAPSN', 'RARA', 'RARB', 'RARG', 'RARS', 'RASSF1', 'RB1CC1', 'RB1', 'RBBP5', 'RBMX', 'RBPJ', 'RBX1', 'RELA', 'REM1', 'RET', 'RHOA', 'RIPK2', 'RNF220', 'RNF43', 'ROBO1', 'ROCK1', 'ROCK2', 'ROR2', 'RPRD1A', 'RPS27A', 'RPSA', 'RSPO1', 'RSPO2', 'RSPO3', 'RSPO4', 'RUNX2', 'RUNX3', 'RUVBL1', 'RUVBL2', 'RXRA', 'RYK', 'S100A4', 'S100A6', 'SALL1', 'SALL4', 'SATB1', 'SCRIB', 'SDHC', 'SERPINE1', 'SETD2', 'SETD7', 'SFN', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHFM1', 'SHH', 'SIAH1', 'SIL1', 'SIRT1', 'SIRT2', 'SIRT6', 'SKP1', 'SLC6A3', 'SLC9A3R1', 'SLCO1B3', 'SLCO2A1', 'SLIT1', 'SLK', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD5', 'SMAD7', 'SMAD9', 'SMARCA2', 'SMARCA4', 'SMARCA5', 'SMARCB1', 'SMO', 'SMURF1', 'SMYD2', 'SNAI1', 'SNAI2', 'SNX1', 'SOST', 'SOX10', 'SOX13', 'SOX17', 'SOX1', 'SOX2', 'SOX3', 'SOX4', 'SOX6', 'SOX7', 'SOX8', 'SOX9', 'SP1', 'SP7', 'SPAG9', 'SPATA13', 'SPEN', 'SPN', 'SPP1', 'SRC', 'STAT3', 'STK11', 'STRAP', 'STX4', 'SUFU', 'SUV39H1', 'SYP', 'TADA3', 'TAX1BP3', 'TAZ', 'TBL1XR1', 'TBL1X', 'TBX5', 'TBX6', 'TCF12', 'TCF3', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TFAP2A', 'TFCP2', 'TFF1', 'TFF2', 'TFF3', 'TGFB1', 'TGFB2', 'TGFB3', 'TGFBR1', 'TGFBR2', 'TGM2', 'TJP1', 'TJP2', 'TLE1', 'TLE2', 'TLE3', 'TLE4', 'TNFRSF11B', 'TNFSF11', 'TNF', 'TNIK', 'TNKS2', 'TNKS', 'TNS1', 'TOB1', 'TOP2A', 'TP53', 'TRAF4', 'TRIM33', 'TRIM37', 'TRIP10', 'TRRAP', 'TSC2', 'TUBA1A', 'TWIST1', 'TYMS', 'T', 'UBA52', 'UBB', 'UBC', 'UBE2B', 'UBE2R2', 'UBE3A', 'UBR5', 'UCHL1', 'UMPS', 'UPRT', 'USP4', 'USP7', 'USP9X', 'VANGL1', 'VANGL2', 'VASP', 'VAV1', 'VAV2', 'VAV3', 'VCAM1', 'VCL', 'VDR', 'VEGFA', 'VHL', 'VIM', 'WDR64', 'WDTC1', 'WHSC1', 'WIF1', 'WISP1', 'WLS', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8A', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'WWTR1', 'XPO1', 'YAP1', 'YARS', 'YEATS4', 'YES1', 'YWHAB', 'YWHAE', 'YWHAG', 'YWHAH', 'YWHAQ', 'YWHAZ', 'ZAP70', 'ZAR1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZIC3', 'ZNRF3', 'ZYX', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 1.3999912775939165e-14 NRMSE: 2.7537200582099067e-15 MAPE: 9.556625766419827e-12 Pearson Correlation: 0.2086214624393772 Spearman Correlation: 0.23470367460940908 Coefficient of Determination: -6.248028583861316 RMSE: 1.8244011876969908 NRMSE: 0.5842963844032907 MAPE: 764.9199098089339 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.46390914863675997, tolerance: 0.030747074518831245 positive)
Pearson Correlation: 0.9999803459617085 Spearman Correlation: 0.9999572117512616 Coefficient of Determination: 0.9999580906041402 RMSE: 0.0048940281444257725 NRMSE: 0.0009626333879673039 MAPE: 3.829254009896609 Pearson Correlation: 0.13521365711993602 Spearman Correlation: 0.1891469968453472 Coefficient of Determination: -4.161675138825273 RMSE: 1.539592303992746 NRMSE: 0.4930813588285723 MAPE: 665.0227142319741 Predictor: RandomForests Pearson Correlation: 0.6583337231151551 Spearman Correlation: 0.6503205024777605 Coefficient of Determination: 0.41987365167168433 RMSE: 0.5758005266694284 NRMSE: 0.1132573813275823 MAPE: 477.1880977198457 Pearson Correlation: 0.6475541674127557 Spearman Correlation: 0.5680644397062308 Coefficient of Determination: 0.41490985198943364 RMSE: 0.518348433359178 NRMSE: 0.16601015035251138 MAPE: 188.74191841909266 Protein: CCNE1 Protein Interaction Partners Count: 350 x_train_column_count: 347 x_train columns: ['ABL1', 'AKT1', 'AKT2', 'AKT3', 'ALDH18A1', 'ANAPC10', 'ANAPC13', 'ANAPC1', 'ANAPC2', 'ANAPC4', 'ANAPC5', 'ANAPC7', 'ANXA5', 'ARID1A', 'AR', 'ATM', 'AURKA', 'AURKB', 'BARD1', 'BCL2L1', 'BIRC5', 'BRCA1', 'BRCA2', 'BTG2', 'BTRC', 'BUB1B', 'BUB1', 'BUB3', 'RGCC', 'MLIP', 'CABLES1', 'CALM1', 'CAPRIN1', 'CASP3', 'CASP9', 'CBX7', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNB2', 'CCNC', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNF', 'CCNG1', 'CCNH', 'CCNK', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CCT2', 'CCT3', 'CCT4', 'CCT5', 'CCT6A', 'CCT6B', 'CCT7', 'CCT8', 'CDC16', 'CDC20', 'CDC23', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC26', 'CDC27', 'CDC45', 'CDC6', 'CDC7', 'CDCA2', 'CDCA5', 'CDCA8', 'CDH1', 'CDK12', 'CDK13', 'CDK14', 'CDK15', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CENPA', 'CENPE', 'CHAF1A', 'CHD1L', 'CHEK1', 'CHEK2', 'CINP', 'CKS1B', 'CKS2', 'COPS5', 'CREBBP', 'CSK', 'CTNNB1', 'CUL1', 'CUL3', 'CUL4B', 'DBF4B', 'DBF4', 'DGCR8', 'DICER1', 'DTL', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'EBNA1BP2', 'ECT2', 'EGFR', 'EGF', 'ELAVL1', 'ELSPBP1', 'EP400', 'ERBB2', 'ERBB3', 'ERBB4', 'ESPL1', 'ESR1', 'EXO1', 'EZH2', 'FAM58A', 'FAM83H', 'FBXO5', 'FBXW7', 'FEN1', 'FGFR1', 'FGFR2', 'FGFR3', 'FOXM1', 'FZR1', 'GAPDH', 'GLI1', 'GMNN', 'GSK3B', 'H1F0', 'HDAC1', 'HEATR3', 'HERC5', 'HIST1H1A', 'HIST1H1B', 'HIST1H4A', 'HRAS', 'IFNAR1', 'IGF1R', 'IGF1', 'ITPKB', 'JUN', 'KIF11', 'KIF20A', 'KIF23', 'KIF2C', 'KPNA2', 'KRAS', 'LATS2', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'GMNC', 'MAD2L1', 'MAPK3', 'MATK', 'MAX', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM4', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDM2', 'MEGF11', 'MELK', 'MKI67', 'KMT2D', 'KMT2B', 'MNAT1', 'MRE11A', 'MTOR', 'MYBL2', 'MYC', 'NBN', 'NF1', 'NFYB', 'NMI', 'NOTCH1', 'NOTCH3', 'NPAT', 'NRAS', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PARK2', 'PARP1', 'PCBP4', 'PCNA', 'PIK3CA', 'PIK3R1', 'PKMYT1', 'PLK1', 'PLK4', 'POLA1', 'POLD1', 'PPP1R1C', 'PPP2CA', 'PPP2CB', 'PPP2R1A', 'PPP2R4', 'PRC1', 'PRKAR1A', 'PRKAR2A', 'PRMT5', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB10', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSMF1', 'PTEN', 'PTGDR', 'PTK6', 'PTTG1', 'RAD51', 'RAD54L', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RBX1', 'REL', 'REM1', 'RHOA', 'RHOBTB3', 'RINT1', 'RNASE1', 'RPRD1A', 'RPS27A', 'RRM1', 'RRM2', 'RRN3', 'RSF1', 'SHFM1', 'SKP1', 'SKP2', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'ST8SIA1', 'STAT3', 'STAT5A', 'STAT5B', 'STK11', 'STK3', 'STK4', 'TARBP1', 'TCP1', 'TERF1', 'TERT', 'TFDP1', 'TK1', 'TOP2A', 'TP53BP1', 'TP53', 'TP63', 'TP73', 'TPX2', 'TTK', 'TUBG1', 'TYMS', 'UBA52', 'UBB', 'UBC', 'UBE2C', 'UBE2QL1', 'UBE2S', 'UHRF2', 'WEE1', 'WEE2', 'XIAP', 'YAP1', 'ZNF217', 'ZNF33A', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.9598341887810987 Spearman Correlation: 0.8788919966826688 Coefficient of Determination: 0.9212816699530698 RMSE: 0.12591692181205155 NRMSE: 0.04485019476831756 MAPE: 24.728372373966806 Pearson Correlation: 0.6943581334274854 Spearman Correlation: 0.41095026122520234 Coefficient of Determination: 0.13542917823406175 RMSE: 0.6026146657078169 NRMSE: 0.14542912510746842 MAPE: 102.47606323835502 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 4.533928668020644, tolerance: 0.010836139816194496 positive)
Pearson Correlation: 0.9589620027892867 Spearman Correlation: 0.8743245005237859 Coefficient of Determination: 0.9196052018740646 RMSE: 0.12725068729135444 NRMSE: 0.04532526706726783 MAPE: 25.091735231541755 Pearson Correlation: 0.7128940069877334 Spearman Correlation: 0.4380777815184728 Coefficient of Determination: 0.1252164884540301 RMSE: 0.6061633910795389 NRMSE: 0.14628553975421457 MAPE: 99.90544351080972 Predictor: RandomForests Pearson Correlation: 0.8628866187424806 Spearman Correlation: 0.7123646669252789 Coefficient of Determination: 0.7415758280964511 RMSE: 0.22814593168750602 NRMSE: 0.08126302108192555 MAPE: 54.405867253368335 Pearson Correlation: 0.7819079210289549 Spearman Correlation: 0.7309018274919328 Coefficient of Determination: 0.5784153717310645 RMSE: 0.4208058737411625 NRMSE: 0.10155317077519187 MAPE: 76.84316764285622 Protein: CCND1 Protein Interaction Partners Count: 857 x_train_column_count: 849 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACTB', 'ACTG1', 'ACTL6A', 'ACTL6B', 'AFP', 'AHR', 'AKAP12', 'AKAP8', 'AKR1B10', 'AKT1', 'AKT2', 'AKT3', 'ALB', 'ALDOA', 'ALK', 'ANO1', 'ANXA5', 'APAF1', 'APC', 'APEX1', 'AREG', 'ARHGEF2', 'ARID1A', 'ARID1B', 'ARID2', 'ARID4A', 'AR', 'ASIP', 'ATF2', 'ATF3', 'ATF4', 'ATM', 'ATXN1', 'AURKA', 'AURKB', 'AXIN1', 'AXIN2', 'B2M', 'BANP', 'BARX2', 'BAX', 'BCAR1', 'BCAR3', 'BCCIP', 'BCL2A1', 'BCL2L11', 'BCL2L1', 'BCL2L2', 'BCL2', 'BCL3', 'BCL6', 'BCL9', 'BECN1', 'BGLAP', 'BHLHE40', 'BIRC2', 'BIRC3', 'BIRC5', 'BMI1', 'BMP4', 'BMP6', 'BRAF', 'BRCA1', 'BRCA2', 'BRD2', 'BRD4', 'BTC', 'BTG2', 'BTRC', 'RGCC', 'COPRS', 'CA9', 'CARD11', 'CARM1', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAT', 'CAV1', 'CBFB', 'CCDC62', 'CCL2', 'CCL5', 'CCNA1', 'CCNA2', 'CCNB1', 'CCNC', 'CCND2', 'CCND3', 'CCNDBP1', 'CCNE1', 'CCNE2', 'CCNG2', 'CCNH', 'CCNK', 'CCNL1', 'CCNL2', 'CCNT1', 'CCNT2', 'CCNY', 'CD19', 'CD22', 'CD24', 'CD34', 'CD38', 'CD44', 'CD5', 'CD79A', 'CDC20', 'CDC25A', 'CDC25B', 'CDC25C', 'CDC27', 'CDC42', 'CDC6', 'CDC73', 'CDCA7L', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK12', 'CDK13', 'CDK14', 'CDK16', 'CDK17', 'CDK18', 'CDK1', 'CDK20', 'CDK2', 'CDK3', 'CDK4', 'CDK5', 'CDK6', 'CDK7', 'CDK8', 'CDK9', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CDT1', 'CDX2', 'CENPE', 'CEP57', 'CFLAR', 'CHEK1', 'CHEK2', 'CHKA', 'CHUK', 'CKS1B', 'CKS2', 'CLCN3', 'COL1A1', 'CR2', 'CREB1', 'CREBBP', 'CRKL', 'CRYAB', 'CSF2', 'CTBP1', 'CTGF', 'CTNNB1', 'CTNND1', 'CTTN', 'CUL1', 'CUL3', 'CUL7', 'CXCL12', 'CXCR4', 'CYCS', 'CYLD', 'CYP19A1', 'CYR61', 'DACH1', 'DAXX', 'DDIT3', 'DDX53', 'DECR1', 'DHFR', 'DICER1', 'DKK1', 'DKK3', 'DLL1', 'DMTF1', 'DND1', 'DNMT1', 'DNMT3A', 'DNTT', 'DVL1', 'DVL2', 'DYRK1A', 'DYRK1B', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'E2F6', 'E2F7', 'E2F8', 'E4F1', 'EDN1', 'EEF1A1', 'EGFR', 'EGF', 'EGLN2', 'EGR1', 'EIF2AK3', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'EIF3I', 'EIF4A1', 'EIF4A2', 'EIF4EBP1', 'EIF4E', 'EIF4G1', 'ELAVL1', 'ELSPBP1', 'EP300', 'EPCAM', 'EPHA2', 'EPHA7', 'ERBB2', 'ERBB3', 'ERBB4', 'ESR1', 'ESR2', 'ETS1', 'ETV4', 'EWSR1', 'EYA1', 'EZH2', 'FABP4', 'FADD', 'FAM58A', 'FAM83H', 'FASLG', 'FAT1', 'FBXO31', 'FBXO4', 'FBXW7', 'FBXW8', 'FGF13', 'FGF19', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FHL2', 'FIGF', 'FLCN', 'FLNA', 'FLT1', 'FLT3', 'FN1', 'FOSL1', 'FOS', 'FOXA1', 'FOXC1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXO4', 'FRZB', 'FSTL3', 'FZD1', 'FZD2', 'FZD7', 'FZD9', 'FZR1', 'GADD45A', 'GAL', 'GAPDH', 'GAST', 'GATA3', 'GATA4', 'GDF15', 'GDF2', 'GGNBP2', 'GGT1', 'GIT1', 'GJA1', 'GJB1', 'GLI1', 'GLI2', 'GLI3', 'GLTSCR2', 'GNB2L1', 'GPER1', 'GRB2', 'GREB1', 'GRM4', 'GRP', 'GSK3B', 'H1F0', 'H2AFB1', 'H2AFJ', 'H2AFV', 'H2AFX', 'H2AFZ', 'HBEGF', 'HBZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HDAC4', 'HEXIM1', 'HEY1', 'HGF', 'HIF1A', 'HIST1H2AA', 'HIST1H2AC', 'HIST1H2AD', 'HIST1H2AH', 'HIST1H2AJ', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST1H4A', 'HIST1H4B', 'HIST1H4C', 'HIST1H4D', 'HIST1H4E', 'HIST1H4F', 'HIST1H4H', 'HIST1H4I', 'HIST1H4J', 'HIST1H4K', 'HIST1H4L', 'HIST2H2AC', 'HIST2H2BE', 'HIST2H4A', 'HIST4H4', 'HMGA2', 'HMOX1', 'HNF1A', 'HNF4A', 'HNRNPD', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB8', 'ICAM1', 'ID1', 'ID2', 'IFNAR1', 'IFNB1', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP3', 'IGFBP5', 'IHH', 'IKBKB', 'IL10', 'IL17A', 'IL2', 'IL4', 'IL6', 'IL7', 'CXCL8', 'ILK', 'INSM1', 'INS', 'IRF1', 'IRS1', 'ISG15', 'ITGB1', 'ITPKB', 'ITPKC', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JARID2', 'JUNB', 'JUND', 'JUN', 'KAT2A', 'KAT2B', 'KDM1A', 'KDM5B', 'KDR', 'KHDRBS1', 'KIF18B', 'KIN', 'KITLG', 'KIT', 'KLF13', 'KLF4', 'KLF5', 'KLF6', 'KLK3', 'KRAS', 'KRT10', 'KRT14', 'KRT18', 'KRT19', 'KRT5', 'KRT7', 'KRT8', 'LDB3', 'LEF1', 'LEP', 'LGALS3', 'LGR5', 'LIMK2', 'LIMS1', 'LIN28B', 'LMNA', 'LMNB1', 'LOX', 'LRP5', 'LRP6', 'LYN', 'MAFB', 'MAF', 'MAML1', 'MAML2', 'MAML3', 'MAMLD1', 'MAP2K1', 'MAP2K2', 'MAP2K4', 'MAP2K7', 'MAP3K5', 'MAPK10', 'MAPK11', 'MAPK12', 'MAPK14', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MAPK9', 'MCL1', 'MCM10', 'MCM2', 'MCM3', 'MCM5', 'MCM6', 'MCM7', 'MCM8', 'MDK', 'MDM2', 'MDM4', 'MEN1', 'MET', 'MGMT', 'MITF', 'MKI67', 'MLH1', 'MLXIPL', 'MME', 'MMP11', 'MMP14', 'MMP15', 'MMP1', 'MMP2', 'MMP3', 'MMP7', 'MMP9', 'MNAT1', 'MOV10', 'MSH2', 'MST1', 'MTOR', 'MUC1', 'MYBL2', 'MYB', 'MYCN', 'MYC', 'MYEOV', 'MYF5', 'MYOD1', 'MYOG', 'NACA2', 'NADSYN1', 'NANOG', 'NCAM1', 'NCOA1', 'NCOA3', 'NCOR1', 'NES', 'NEUROD1', 'NF1', 'NF2', 'NFKB1', 'NFKB2', 'NFKBIA', 'NGF', 'NKX2-1', 'NME1-NME2', 'NME1', 'NME2', 'NMI', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NQO1', 'NR0B2', 'NR1H3', 'NR2E1', 'NR3C1', 'NR4A3', 'NRAS', 'NRF1', 'NUDT21', 'ODC1', 'ORAI1', 'ORAOV1', 'ORC4', 'PAK1', 'PAK4', 'PARK2', 'PARP1', 'PAX2', 'PAX5', 'PAX6', 'PBRM1', 'PBX3', 'PCNA', 'PDCD4', 'PDGFRA', 'PDGFRB', 'PDZK1', 'PECAM1', 'PELP1', 'PGR', 'PI3', 'PI4K2A', 'PIK3CA', 'PIK3R1', 'PKLR', 'PKM', 'PLAUR', 'PLAU', 'PLK1', 'PMAIP1', 'POLR2A', 'POTEF', 'POU2F1', 'POU5F1', 'PPARG', 'PPP2R4', 'PRDM5', 'PRKACA', 'PRL', 'PRMT5', 'PRNP', 'PROM1', 'PSAT1', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMA8', 'PSMB10', 'PSMB11', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB5', 'PSMB6', 'PSMB7', 'PSMB8', 'PSMB9', 'PSMC1', 'PSMC2', 'PSMC3', 'PSMC4', 'PSMC5', 'PSMC6', 'PSMD10', 'PSMD11', 'PSMD12', 'PSMD13', 'PSMD14', 'PSMD1', 'PSMD2', 'PSMD3', 'PSMD4', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSMD9', 'PSME1', 'PSME2', 'PSME3', 'PSME4', 'PSMF1', 'PTCH1', 'PTCHD3', 'PTEN', 'PTF1A', 'PTGS2', 'PTHLH', 'PTH', 'PTK2', 'PTK6', 'PTPN11', 'PTPRCAP', 'PTPRC', 'PXN', 'RAD51', 'RAF1', 'RALA', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RBX1', 'RCC1', 'RELA', 'RELB', 'REL', 'REM1', 'RET', 'RHEB', 'RHOA', 'RHOC', 'RICTOR', 'RNASE1', 'DROSHA', 'RND3', 'RNMT', 'ROCK1', 'RPRD1B', 'RPS27A', 'RPS6KA1', 'RPS6KA2', 'RPS6KA3', 'RPS6KA6', 'RPS6KB1', 'RPS6', 'RPTOR', 'RREB1', 'RSF1', 'RUNX1', 'RUNX2', 'RUNX3', 'SDC1', 'SDHC', 'SENP1', 'SERPINE1', 'SFRP1', 'SFRP2', 'SFRP4', 'SFRP5', 'SHC1', 'SHFM1', 'SHH', 'SIRT1', 'SIX1', 'SIX3', 'SKP1', 'SKP2', 'SLC25A16', 'SLC25A6', 'SLC2A1', 'SLC35B2', 'SLC39A4', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA2', 'SMARCA4', 'SMARCB1', 'SMARCC1', 'SMARCC2', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'SMARCE1', 'SMO', 'SNAI1', 'SNAI2', 'SNCA', 'SNIP1', 'SNW1', 'SNX33', 'SOCS3', 'SOX11', 'SOX17', 'SOX2', 'SOX4', 'SOX6', 'SOX9', 'SP1', 'SPN', 'SPP1', 'SPRY1', 'SRC', 'SREBF1', 'STAT1', 'STAT3', 'STAT4', 'STAT5A', 'STAT5B', 'STAT6', 'STC2', 'STIM1', 'STK11', 'STK24', 'STMN1', 'SUFU', 'SULF2', 'SUV39H1', 'TAF1', 'TBP', 'TBX2', 'TCEAL7', 'TCF4', 'TCF7L2', 'TCF7', 'TERT', 'TET3', 'TFDP1', 'TFF1', 'TGFA', 'TGFB1', 'TGFBR2', 'THBS1', 'THRA', 'THRB', 'TIMP1', 'TIMP2', 'TIMP3', 'TJP1', 'TJP2', 'TJP3', 'TLE1', 'TLR9', 'TM4SF1', 'TMPRSS4', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF8', 'TNFSF11', 'TNF', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TNS1', 'TOP2A', 'TP53', 'TP63', 'TP73', 'TRPV2', 'TSC22D3', 'TSC2', 'TWIST1', 'TXN', 'TYMS', 'UBA52', 'UBA7', 'UBB', 'UBC', 'UBE2C', 'UBTF', 'URGCP', 'USP18', 'USP2', 'USP9X', 'VCL', 'VDR', 'VEGFA', 'VEGFC', 'VIP', 'VRK1', 'WDR77', 'WDTC1', 'WEE1', 'WHSC1', 'WIF1', 'WISP1', 'WNT10A', 'WNT10B', 'WNT11', 'WNT16', 'WNT1', 'WNT2B', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT6', 'WNT7A', 'WNT7B', 'WNT8B', 'WNT9A', 'WNT9B', 'WT1', 'XBP1', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YY1', 'ZBTB17', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.1916148433324011e-14 NRMSE: 7.50538422939384e-15 MAPE: 2.942330367215e-11 Pearson Correlation: -0.04589954047063813 Spearman Correlation: -0.04784847691367723 Coefficient of Determination: -8.022345642542726 RMSE: 0.8289039423695816 NRMSE: 0.5295766361083948 MAPE: 730.5586271858322 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.15237991904030368, tolerance: 0.0027873943484564415 positive)
Pearson Correlation: 0.99980188050879 Spearman Correlation: 0.999717801786888 Coefficient of Determination: 0.9995775214980677 RMSE: 0.004678540324248625 NRMSE: 0.002946777892427079 MAPE: 7.985969557152838 Pearson Correlation: -0.007246064993235461 Spearman Correlation: -0.03832217359318695 Coefficient of Determination: -4.6834326941459095 RMSE: 0.6578847742979065 NRMSE: 0.4203145719438203 MAPE: 614.3814603663037 Predictor: RandomForests Pearson Correlation: 0.5728440991861032 Spearman Correlation: 0.5777329889364351 Coefficient of Determination: 0.2922815971261987 RMSE: 0.19148656744162806 NRMSE: 0.12060778459237886 MAPE: 522.6804404874892 Pearson Correlation: 0.3191268678861373 Spearman Correlation: 0.29400117208443993 Coefficient of Determination: 0.10068807409810243 RMSE: 0.2616975466040141 NRMSE: 0.1671953761158266 MAPE: 243.61201052041503 Protein: ERBB2 Protein Interaction Partners Count: 663 x_train_column_count: 657 x_train columns: ['ABCB1', 'ABCG2', 'ABL1', 'ACPP', 'ACTA2', 'ACTB', 'ACTG1', 'ADAM10', 'ADAM17', 'ADRB2', 'AFP', 'AGRN', 'AKT1S1', 'AKT1', 'AKT2', 'ALB', 'ALDH1A1', 'ALK', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'ANO1', 'ANXA2', 'ANXA5', 'AP2B1', 'APP', 'AREG', 'ARHGEF11', 'ARHGEF12', 'ARID1A', 'ARL6IP5', 'AR', 'ATM', 'ATP2B2', 'AURKB', 'AXIN1', 'BAG1', 'BARD1', 'BCAR1', 'BCAR3', 'BCAS1', 'BCL2L11', 'BCL2L1', 'BDNF', 'BECN1', 'BEST1', 'BIRC5', 'BLNK', 'BMI1', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BSG', 'BTC', 'MIEN1', 'CA9', 'CALU', 'CARTPT', 'CASP3', 'CASP7', 'CASP8', 'CASP9', 'CAV1', 'CBLB', 'CBLC', 'CBL', 'CCL27', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CD19', 'CD22', 'CD247', 'CD24', 'CD274', 'CD28', 'CD33', 'CD34', 'CD44', 'CD46', 'CD52', 'CD68', 'CD6', 'CD80', 'CD82', 'CDC37', 'CDC42', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDK4', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN3', 'CDX2', 'CEACAM5', 'CEP70', 'CHEK2', 'CHGA', 'CHKA', 'CHKB', 'CISH', 'CLDN3', 'CLDN4', 'CLDN7', 'CLTC', 'CNN1', 'COPS5', 'CPNE3', 'CREB1', 'CRKL', 'CRK', 'YBX3', 'CSF1', 'CSF2', 'CSF3', 'CSK', 'CSPG4', 'CTAG1B', 'CTLA4', 'CTNNB1', 'CTNND1', 'CTSB', 'CTSD', 'CTTN', 'CUL5', 'CXCL12', 'CXCR1', 'CXCR4', 'CYCS', 'CYP19A1', 'CYTIP', 'DCN', 'DDX41', 'DDX53', 'DHH', 'DIAPH1', 'DICER1', 'DLG4', 'DMTF1', 'DNAJA3', 'DNM2', 'DNMT1', 'DOCK1', 'DOCK7', 'DUSP6', 'E2F1', 'E2F3', 'EEA1', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EFNB1', 'EGFR', 'EGF', 'EIF3A', 'EIF4EBP1', 'EIF4E', 'ELAVL1', 'ELF3', 'EML4', 'ENO2', 'EP300', 'EPCAM', 'EPGN', 'EPHA2', 'EPS15', 'EPX', 'ERAL1', 'ERBB2IP', 'ERBB3', 'ERBB4', 'ERCC1', 'EREG', 'ERRFI1', 'ESCO1', 'ESR1', 'ESR2', 'ESRRB', 'ETS1', 'ETS2', 'ETV4', 'ETV6', 'EZH2', 'EZR', 'FASLG', 'FASN', 'FBXW7', 'FCGR1A', 'FCGR1B', 'FCGRT', 'FGF10', 'FGF13', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FGFR4', 'FHIT', 'FIGF', 'FLT1', 'FLT3LG', 'FN1', 'FOLH1', 'FOLR1', 'FOS', 'FOXA1', 'FOXM1', 'FOXO1', 'FOXO3', 'FOXP3', 'FREM2', 'FSIP1', 'FYN', 'GAB1', 'GABPB1', 'GAPDH', 'GATA3', 'GATA4', 'GDF2', 'GLI1', 'GLI2', 'GLS', 'GNA11', 'GNAQ', 'GNAS', 'GNRH1', 'GPER1', 'GRAP2', 'GRB2', 'GRB7', 'GSTP1', 'GZMB', 'H2AFX', 'H2AFY', 'HBEGF', 'HDAC1', 'HDAC6', 'HEATR6', 'HGF', 'HIF1A', 'HK1', 'HLA-A', 'HMGA2', 'HNF4A', 'HOXB7', 'HPGDS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSP90B1', 'HSPA4', 'HSPA5', 'HSPA8', 'HSPB1', 'HSPB2', 'HSPB3', 'HSPG2', 'ICAM1', 'ID1', 'IDH1', 'IDH2', 'IFNG', 'IGF1R', 'IGF1', 'IGF2', 'IGFBP2', 'IGFBP3', 'IHH', 'IL10', 'IL2', 'IL4', 'IL6R', 'IL6ST', 'IL6', 'CXCL8', 'ILK', 'INPP4B', 'INS', 'IQGAP1', 'IQSEC1', 'IRS1', 'ITGA5', 'ITGA6', 'ITGAV', 'ITGB1', 'ITGB3', 'ITGB4', 'ITPKB', 'JAG1', 'JAG2', 'JAK1', 'JAK2', 'JAK3', 'JUN', 'JUP', 'KDR', 'KITLG', 'KLK3', 'KLRK1', 'KRAS', 'KRT14', 'KRT17', 'KRT18', 'KRT19', 'KRT20', 'KRT4', 'KRT5', 'KRT7', 'KRT8', 'L1CAM', 'LAMP1', 'LCN2', 'LDHA', 'LEP', 'LIN28A', 'LIN7A', 'LIN7B', 'LIN7C', 'LINGO1', 'LOX', 'LRIG1', 'LRPPRC', 'MAGEA1', 'MAGEA3', 'MAGED4B', 'MAGED4', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK8', 'MATK', 'MCL1', 'MDK', 'MDM2', 'MEMO1', 'MET', 'MGMT', 'MKI67', 'MLANA', 'MLH1', 'KMT2C', 'MME', 'MMP11', 'MMP14', 'MMP16', 'MMP1', 'MMP2', 'MMP7', 'MMP9', 'MPP1', 'MRAP', 'MRAS', 'MSH2', 'MSH6', 'MSLN', 'MTA1', 'MTOR', 'MUC13', 'MUC16', 'MUC1', 'MUC4', 'MUC6', 'MUCL1', 'MYBL2', 'MYCN', 'MYC', 'NANOG', 'NCAM1', 'NCL', 'NCOA1', 'NCOA3', 'NCOR1', 'NDRG1', 'NF1', 'NF2', 'NFE2L2', 'NGF', 'NISCH', 'NKX2-1', 'NME1', 'NOTCH1', 'NOTCH2', 'NOTCH3', 'NOTCH4', 'NPM1', 'NR1H4', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NRP1', 'NTF3', 'NTF4', 'OPCML', 'OSMR', 'PA2G4', 'PADI2', 'PAK1', 'PALB2', 'PAQR3', 'PARP1', 'PAX2', 'PCSK9', 'PDCD1LG2', 'PDCD1', 'PDCD4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PDGFRA', 'PDPN', 'PECAM1', 'PELP1', 'PEPD', 'PFKFB3', 'PGAP3', 'PGF', 'PGR', 'PI3', 'PIK3C2A', 'PIK3C2B', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3CG', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIN1', 'PIP', 'PLAUR', 'PLAU', 'PLCG1', 'PLCG2', 'PLEK', 'PLG', 'PLXNB1', 'POLI', 'POTEF', 'POU5F1', 'PPARG', 'PPP3CA', 'PRDM10', 'PRF1', 'PRKACA', 'PRL', 'PROM1', 'PSCA', 'PTCH1', 'PTEN', 'PTGS2', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'PTPN1', 'PTPRC', 'PTPRO', 'PTPRU', 'PTS', 'PXN', 'RAB25', 'RAD51', 'RAF1', 'RANBP2', 'RARA', 'RASA1', 'RASA2', 'RASSF1', 'RB1', 'RBPJ', 'RDX', 'RECK', 'REM1', 'REN', 'RET', 'RHEB', 'RHOA', 'RHOB', 'RHOC', 'RICTOR', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'ROS1', 'RPS27A', 'RPS6', 'RPTOR', 'RRAS2', 'RRAS', 'S100A14', 'SCGB2A2', 'SCUBE2', 'SDC1', 'SDHC', 'SEMA3D', 'SEMA4D', 'SERPINB5', 'SERPINE1', 'SFRP1', 'PEAK1', 'SH3BGRL3', 'SH3BGRL', 'SH3TC2', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SIAH2', 'PMEL', 'SKP2', 'SLC25A16', 'SLC2A1', 'SLC4A7', 'SMAD2', 'SMAD3', 'SMAD4', 'SMAD7', 'SMARCA4', 'SMARCB1', 'SMO', 'SMUG1', 'SMYD3', 'SNAI1', 'SNAI2', 'SOCS1', 'SOS1', 'SOX10', 'SOX2', 'SOX9', 'SP3', 'SPP1', 'SPRY2', 'SRCIN1', 'SRC', 'STARD3', 'STAT1', 'STAT2', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'STOM', 'STUB1', 'SYP', 'TAGLN', 'TBX1', 'TERT', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TFRC', 'TGFA', 'TGFB1', 'THBS1', 'THRA', 'TIMP1', 'TJP1', 'TMPRSS2', 'TNFRSF10A', 'TNFRSF10B', 'TNFRSF13C', 'TNFRSF4', 'TNFRSF8', 'TNFRSF9', 'TNFSF11', 'TNF', 'TNS1', 'TNS3', 'TNS4', 'TOB1', 'TOP1', 'TOP2A', 'TP53', 'TP63', 'TSC2', 'TWIST1', 'TYMS', 'TYR', 'UBA52', 'UBB', 'UBC', 'USP2', 'USP9X', 'VAV1', 'VAV2', 'VAV3', 'VCL', 'VEGFA', 'VEGFB', 'VEGFC', 'VIM', 'WASL', 'WDFY2', 'WDTC1', 'WNT10A', 'WNT1', 'WNT2', 'WNT3A', 'WNT3', 'WNT4', 'WNT5A', 'WNT5B', 'WNT7B', 'WNT9A', 'WNT9B', 'WT1', 'WWOX', 'XIAP', 'XPO1', 'YAP1', 'YBX1', 'YES1', 'YY1', 'ZEB1', 'ZEB2', 'ZNF217', 'ZNF703', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 1.1731816338646554e-13 NRMSE: 1.998707998474633e-14 MAPE: 1.5897100817063214e-10 Pearson Correlation: 0.151111984571829 Spearman Correlation: 0.18535143829723566 Coefficient of Determination: -11.151923552665053 RMSE: 3.0248389867563827 NRMSE: 0.6692862012958033 MAPE: 1845.076380051254 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 1.0360645815650364, tolerance: 0.05684616744754108 positive)
Pearson Correlation: 0.999868363236256 Spearman Correlation: 0.9995258807828872 Coefficient of Determination: 0.999734166759121 RMSE: 0.01675961740438817 NRMSE: 0.002855276658839152 MAPE: 25.44219132752421 Pearson Correlation: 0.22546594537467504 Spearman Correlation: 0.180787790371451 Coefficient of Determination: -5.349649310909263 RMSE: 2.186525857436397 NRMSE: 0.4837981762222363 MAPE: 1456.3958324837827 Predictor: RandomForests Pearson Correlation: 0.8566837515184769 Spearman Correlation: 0.6907002191586037 Coefficient of Determination: 0.7274982219685785 RMSE: 0.536591918208216 NRMSE: 0.09141726463161932 MAPE: 545.7807910694142 Pearson Correlation: 0.7987754299331115 Spearman Correlation: 0.6345402564362305 Coefficient of Determination: 0.6239960700040706 RMSE: 0.5320787808011717 NRMSE: 0.11772956760729543 MAPE: 236.99238278934894 Protein: ERBB3 Protein Interaction Partners Count: 245 x_train_column_count: 247 x_train columns: ['ADAM17', 'AGRN', 'AGTR2', 'AKT1', 'AKT2', 'AKT3', 'ALAS2', 'ALB', 'ANGPT1', 'ANGPT2', 'ANGPT4', 'APIP', 'AREG', 'AR', 'BAMBI', 'BDNF', 'BMP2', 'BMP4', 'BRCA1', 'BRCA2', 'BTC', 'CADM4', 'CASK', 'CASP3', 'CBLB', 'CBLC', 'CBL', 'CCND1', 'CCNE1', 'CD44', 'CD82', 'CDC42', 'CDH1', 'CDK4', 'CDK5', 'CDKN1B', 'CDKN2A', 'CLEC16A', 'COMMD5', 'COQ7', 'CRKL', 'CRK', 'CRYZL1', 'CSF1', 'CSK', 'CSPG5', 'CTNNB1', 'DCN', 'DHH', 'DOCK7', 'DUSP6', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'EGR1', 'EHF', 'EIF4EBP1', 'EIF4E', 'EML4', 'EPCAM', 'EPGN', 'EPN1', 'ERBB2IP', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'ESR2', 'FBXO9', 'FGF10', 'FGF16', 'FGF17', 'FGF18', 'FGF19', 'FGF1', 'FGF20', 'FGF21', 'FGF22', 'FGF23', 'FGF2', 'FGF3', 'FGF4', 'FGF5', 'FGF6', 'FGF7', 'FGF8', 'FGF9', 'FGFR1', 'FGFR2', 'FGFR3', 'FIGF', 'FKBP14', 'FLNA', 'FLT3LG', 'FN1', 'FOXA1', 'FOXO3', 'FREM2', 'FTSJ1', 'GAB1', 'GAPDH', 'GLE1', 'GRB2', 'GRB7', 'GRHL2', 'HBEGF', 'HGF', 'HGS', 'HRAS', 'HSP90AA1', 'HSP90AB1', 'HSPG2', 'IGF1', 'IGF2', 'IL6ST', 'ILK', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'ITPKB', 'JAK1', 'JAK2', 'JUN', 'KDR', 'KITLG', 'KRAS', 'L1CAM', 'LAMA1', 'LAMB1', 'LAMC2', 'LIN7A', 'LIN7B', 'LIN7C', 'LRIG1', 'MAP2K1', 'MAPK1', 'MAPK3', 'MAPK7', 'MAPK8', 'MARCH7', 'MDM2', 'MET', 'MITF', 'MMP9', 'MRPL49', 'MTOR', 'MUC1', 'MUC4', 'MYC', 'N4BP1', 'NDRG1', 'NEDD4L', 'NEDD4', 'NF1', 'NGF', 'NICN1', 'NOTCH1', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'NTF3', 'NTF4', 'OAT', 'PA2G4', 'PARK7', 'PCSK9', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PGR', 'PI3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIP5K1C', 'PLCG1', 'PLCG2', 'PPP1R9A', 'PRKACA', 'PTEN', 'PTK2B', 'PTK2', 'PTK6', 'PTPN11', 'PTPN22', 'PTPN2', 'RASA1', 'RASA2', 'REM1', 'RGS4', 'RHOA', 'RHOC', 'RNF41', 'ROR1', 'RRAS2', 'SH2B3', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SHH', 'SLC25A16', 'SMAD4', 'SNAI2', 'SOS1', 'SOX10', 'SOX2', 'SPARC', 'SPRY2', 'SRC', 'STAT3', 'STAT5A', 'STAT5B', 'SYN3', 'TCF7L2', 'TGFA', 'TMEFF2', 'TNFRSF13C', 'TNS1', 'TP53', 'USP8', 'VAV1', 'VAV2', 'VAV3', 'VEGFA', 'VEGFB', 'VEGFC', 'WNT1', 'WNT5A', 'ZEB1', 'ZNF217', 'KRBOX4', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.7466876386492644 Spearman Correlation: 0.7360795558698706 Coefficient of Determination: 0.5575424297116146 RMSE: 0.3119072751471754 NRMSE: 0.08417482131745108 MAPE: 190.3702868775805 Pearson Correlation: 0.1338431738244597 Spearman Correlation: 0.1755408421551391 Coefficient of Determination: -1.1329661899488248 RMSE: 0.608970454626046 NRMSE: 0.2946384115974367 MAPE: 380.747375830627 Predictor: ElasticNet Pearson Correlation: 0.7445302444497095 Spearman Correlation: 0.7351004542432946 Coefficient of Determination: 0.55430451887255 RMSE: 0.3130464657472939 NRMSE: 0.08448225616380484 MAPE: 186.85841765855798 Pearson Correlation: 0.1511503020473764 Spearman Correlation: 0.18074788962455893 Coefficient of Determination: -1.0077165364456553 RMSE: 0.5908203353726162 NRMSE: 0.28585683234919795 MAPE: 376.60353759757237 Predictor: RandomForests Pearson Correlation: 0.543783700878312 Spearman Correlation: 0.5318965825486458 Coefficient of Determination: 0.27033054769490783 RMSE: 0.4005463439783744 NRMSE: 0.10809596190992625 MAPE: 251.16263272132832 Pearson Correlation: 0.5443611277287489 Spearman Correlation: 0.5831419344380854 Coefficient of Determination: 0.24615476712952655 RMSE: 0.36203064429982834 NRMSE: 0.17516142725117975 MAPE: 228.10624964382416
Top 100 Interaction Partners
ZScore
scenario = Scenario.Top100InteractionPartners_Mutations
normalizeTechnique = NormalizeTechnique.ZScore
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.648331 | 0.348611 | 0.770359 | -0.860535 | -0.0703 | -0.190586 | 0.719543 | 0.931178 | -0.283665 | -0.568745 | ... | 0.238689 | -0.239582 | -0.271725 | -0.222943 | -0.211122 | 0.792968 | -0.619672 | -0.946953 | -0.457066 | 0.454464 |
| TCGA-A1-A0SH-01 | -0.757220 | -0.562180 | -0.708360 | -0.860535 | -0.0703 | -0.190586 | -0.527186 | -0.611509 | -0.283665 | -0.568745 | ... | 0.739490 | -0.107967 | -1.200905 | -0.903627 | 1.252346 | 0.854083 | 0.108510 | -0.031025 | 0.991113 | -0.083768 |
| TCGA-A1-A0SJ-01 | -0.405237 | 0.254851 | -0.925065 | -0.223237 | -0.0703 | -0.190586 | -0.525012 | -0.390046 | -0.283665 | 1.475888 | ... | 0.592975 | 5.821247 | -1.079296 | -0.618408 | 0.444358 | -0.369825 | -0.573411 | -0.555512 | -0.488416 | -0.083768 |
| TCGA-A1-A0SK-01 | 3.940101 | 14.857648 | -0.228301 | -0.311392 | -0.0703 | -0.004913 | -0.697917 | -0.754652 | -0.283665 | -0.568745 | ... | 0.051750 | -0.027856 | 2.390553 | 0.357970 | 1.337526 | -1.597758 | 1.043918 | 0.590450 | -0.467061 | -0.083768 |
| TCGA-A1-A0SQ-01 | -1.114818 | -1.129592 | -0.842620 | -0.860535 | -0.0703 | -0.190586 | -0.507239 | -0.137487 | -0.283665 | -0.568745 | ... | 1.412610 | -0.008283 | -0.929428 | -0.853107 | 0.062384 | -0.434733 | -1.040418 | -0.606257 | -0.580936 | -0.083768 |
5 rows × 20133 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AATF', 'ABL1', 'AKT1', 'AR', 'ASF1A', 'ATF2', 'BGLAP', 'CASP3', 'CBX4', 'CCNA1', 'CCNA2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CEBPA', 'COL1A1', 'CREBBP', 'CTBP1', 'DNMT1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'ELF1', 'EP300', 'FOXM1', 'FZR1', 'GNB2L1', 'H1F0', 'H2AFV', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HIST1H2BA', 'HIST2H2AC', 'HIST2H2BE', 'HMGA1', 'HMGA2', 'HSP90AA1', 'ID2', 'JUN', 'MAPK14', 'MAPK1', 'MAPK3', 'MDM2', 'MEF2C', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NFYC', 'PCNA', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP2CA', 'PPP2CB', 'PRIM1', 'PRIM2', 'RAF1', 'RBBP4', 'RUNX2', 'SIRT1', 'SKP2', 'SMARCA2', 'SMC2', 'SMC4', 'SP100', 'SP1', 'SP3', 'SPI1', 'SUV39H1', 'TAF1', 'TBP', 'TERT', 'TFDP1', 'TP53BP1', 'TP53', 'TP73', 'YAP1', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.4862578117183481 Spearman Correlation: 0.45569906485102674 Coefficient of Determination: 0.2364466594571163 RMSE: 0.1958237184203574 NRMSE: 0.07416160515824934 MAPE: 356.69266626457687 Pearson Correlation: 0.18895593075451472 Spearman Correlation: 0.22351965661886644 Coefficient of Determination: -0.14236496936808907 RMSE: 0.2997664659122587 NRMSE: 0.14808913310851962 MAPE: 238.76208571234153 Predictor: ElasticNet Pearson Correlation: 0.3526617020207563 Spearman Correlation: 0.3514601299332913 Coefficient of Determination: 0.099611572978614 RMSE: 0.21264763368937378 NRMSE: 0.0805330936146085 MAPE: 197.19547151863927 Pearson Correlation: 0.23764937635950434 Spearman Correlation: 0.3031606672519755 Coefficient of Determination: 0.012287519549469383 RMSE: 0.2787378077709866 NRMSE: 0.13770066038492987 MAPE: 128.27302187001297 Predictor: RandomForests Pearson Correlation: 0.5395872065276396 Spearman Correlation: 0.3993118263410426 Coefficient of Determination: 0.17191250113514878 RMSE: 0.20393121954380186 NRMSE: 0.07723204678803326 MAPE: 185.70358823305227 Pearson Correlation: 0.19312819479420687 Spearman Correlation: 0.3103209442981173 Coefficient of Determination: -0.006585797189794462 RMSE: 0.2813882823609106 NRMSE: 0.1390100346111413 MAPE: 126.80089897760412 Protein: CDH1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ACTA1', 'ACTN1', 'ADAM10', 'ADAM15', 'CA2', 'CASP3', 'CBLL1', 'CDC42', 'CDH17', 'CDH3', 'CDH5', 'CTBP1', 'CTNNA1', 'CTNNB1', 'CTNND1', 'CTTN', 'DLG1', 'EFNA1', 'EGFR', 'EGF', 'ENAH', 'EPCAM', 'EPHA2', 'EXOC3', 'EXOC4', 'FER', 'FLOT1', 'FLOT2', 'FMN1', 'FYN', 'GDNF', 'GNA12', 'GNA13', 'HGF', 'HGS', 'IGF1R', 'IGF1', 'IGF2', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'ITGA6', 'ITGAE', 'ITGB4', 'ITGB7', 'AJUBA', 'JUP', 'KIFC3', 'KLK7', 'KLRG1', 'LAMB1', 'LAMC2', 'LIMA1', 'MAPK1', 'MAPK3', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MLLT4', 'MMP3', 'MMP7', 'MMP9', 'MYO6', 'NCSTN', 'NUMB', 'PARD6A', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PLEKHA7', 'PLG', 'PRKCI', 'PRKCZ', 'PSEN1', 'PVRL1', 'PVRL2', 'RAB5A', 'RAB7A', 'RAC1', 'RAP1A', 'RET', 'RHOA', 'SKIL', 'SMAD3', 'SMAD4', 'SNAI1', 'SNAI2', 'SNAI3', 'SRC', 'STX4', 'TJP1', 'TWIST1', 'VASP', 'VCL', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 0.7465805631339265 Spearman Correlation: 0.7089224445362644 Coefficient of Determination: 0.5573825372493704 RMSE: 0.7507398575299529 NRMSE: 0.12618961180810395 MAPE: 483.9945187012053 Pearson Correlation: 0.5837379908401893 Spearman Correlation: 0.5459028387474394 Coefficient of Determination: 0.24654060076167494 RMSE: 1.0071686712533092 NRMSE: 0.1631253719110669 MAPE: 472.69873879722957 Predictor: ElasticNet Pearson Correlation: 0.7228525270003692 Spearman Correlation: 0.7079965636708153 Coefficient of Determination: 0.509195839618866 RMSE: 0.7905499566123831 NRMSE: 0.13288117200551042 MAPE: 586.1935657525883 Pearson Correlation: 0.627672252230368 Spearman Correlation: 0.610223392839723 Coefficient of Determination: 0.3906088206884447 RMSE: 0.9057750686553083 NRMSE: 0.14670322773076808 MAPE: 356.62107829971427 Predictor: RandomForests Pearson Correlation: 0.7426556664990703 Spearman Correlation: 0.6906466081325479 Coefficient of Determination: 0.546860378782499 RMSE: 0.7596109561461517 NRMSE: 0.12768072817745812 MAPE: 206.636462071981 Pearson Correlation: 0.7522562898289546 Spearman Correlation: 0.6985945239376057 Coefficient of Determination: 0.5607856505182343 RMSE: 0.7689720257119443 NRMSE: 0.12454601822291865 MAPE: 144.61405380512727 Protein: CDH2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ADAM10', 'AFP', 'AHSG', 'ALB', 'APLP2', 'APOA1', 'APOB', 'APOE', 'APP', 'AXIN1', 'BDNF', 'BMP4', 'BNIP2', 'CALU', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH17', 'CDH18', 'CDH1', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDON', 'CREBBP', 'CSF1', 'CST3', 'CTNNA1', 'CTNNA2', 'CTNNB1', 'CTNND1', 'CYR61', 'FAM20C', 'FBN1', 'FER', 'FGFR1', 'FN1', 'FSTL1', 'GAS6', 'GJA1', 'GOLM1', 'GPC3', 'GRIA2', 'HSP90B1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL6', 'ITIH2', 'JUP', 'KIF5B', 'KNG1', 'KTN1', 'LAMB1', 'LAMC1', 'LGALS1', 'LRP5', 'LTBP1', 'MAP2K6', 'MAPK11', 'MAPK14', 'MATN3', 'MEF2A', 'MEF2C', 'MEF2D', 'MET', 'MFGE8', 'MSLN', 'NTRK2', 'P4HB', 'PCSK9', 'PIK3CA', 'PIK3R1', 'PTPN11', 'PTPN1', 'RAC1', 'RHOA', 'ROBO1', 'SCG2', 'SDC2', 'SERPINA1', 'SLIT1', 'SNAI1', 'SNAI2', 'SPAG9', 'SPARCL1', 'SPP1', 'STC2', 'TCF3', 'TIMP1', 'TMEM132A', 'TNC', 'VCAN', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.5030741428338669 Spearman Correlation: 0.49401859243815943 Coefficient of Determination: 0.25308359318803 RMSE: 0.3208023112585157 NRMSE: 0.1185141182467262 MAPE: 3299.1466233570877 Pearson Correlation: -0.038846196343309415 Spearman Correlation: 0.06095502877768023 Coefficient of Determination: -0.6927044819124579 RMSE: 0.48803952060656003 NRMSE: 0.2518653664687826 MAPE: 207.33118972150635 Predictor: ElasticNet Pearson Correlation: 0.44066388419523317 Spearman Correlation: 0.4529184826641541 Coefficient of Determination: 0.1765459058157658 RMSE: 0.33683808179971914 NRMSE: 0.1244382189760569 MAPE: 871.2981741372591 Pearson Correlation: 0.10395878678873312 Spearman Correlation: 0.15024387864598576 Coefficient of Determination: -0.029148034599724815 RMSE: 0.3805426553628986 NRMSE: 0.19638884004897486 MAPE: 125.8775999259077 Predictor: RandomForests Pearson Correlation: 0.533289294515734 Spearman Correlation: 0.47801886118231335 Coefficient of Determination: 0.17443795966023257 RMSE: 0.3372689392832374 NRMSE: 0.12459739081789574 MAPE: 846.5144176700857 Pearson Correlation: 0.09229937519677632 Spearman Correlation: 0.16294995610184373 Coefficient of Determination: 0.003838602117242851 RMSE: 0.37439433952349765 NRMSE: 0.19321584327991828 MAPE: 107.14074793900335 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.5729780199091095 Spearman Correlation: 0.5407177293306035 Coefficient of Determination: 0.3283038112989639 RMSE: 0.1711261830213943 NRMSE: 0.12005821899126838 MAPE: 542.8036872086952 Pearson Correlation: 0.03383032500829817 Spearman Correlation: 0.3885523363574286 Coefficient of Determination: -2.4388972684261234 RMSE: 0.37937730193698593 NRMSE: 0.2903745872109558 MAPE: 346.69398891044625 Predictor: ElasticNet Pearson Correlation: 0.4716026109339677 Spearman Correlation: 0.4777443068118792 Coefficient of Determination: 0.2009968420789089 RMSE: 0.1866398038504274 NRMSE: 0.13094222080767484 MAPE: 511.6524435985694 Pearson Correlation: 0.5086120074436036 Spearman Correlation: 0.555053165544825 Coefficient of Determination: 0.22426298367642428 RMSE: 0.18018515190124973 NRMSE: 0.1379133354518907 MAPE: 252.5972478233991 Predictor: RandomForests Pearson Correlation: 0.5488348194628491 Spearman Correlation: 0.5498808348759677 Coefficient of Determination: 0.26165640371302934 RMSE: 0.17941521825494025 NRMSE: 0.12587361666872948 MAPE: 552.0017208748178 Pearson Correlation: 0.4711648997100896 Spearman Correlation: 0.5027704614183982 Coefficient of Determination: 0.20767549842787159 RMSE: 0.1821014003704093 NRMSE: 0.1393800279909142 MAPE: 358.2338803004399 Protein: PTEN Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AR', 'BCR', 'CD79A', 'CD79B', 'CDIPT', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'DLG1', 'EGFR', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'FOXO3', 'FOXO4', 'FRK', 'GRB2', 'HRAS', 'INPP4A', 'INPP4B', 'INPP5B', 'INPP5D', 'INPP5J', 'INPP5K', 'INPPL1', 'IPMK', 'IRS1', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'MAST2', 'MDM2', 'MDM4', 'MKRN1', 'MTOR', 'MYC', 'NEDD4', 'NOTCH1', 'OCRL', 'OTUD3', 'PARK7', 'PDGFB', 'PDGFRB', 'PI4K2A', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIKFYVE', 'PIP4K2A', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PML', 'PREX2', 'PSMA6', 'PSMA7', 'PSMB9', 'PSMC6', 'PSMD10', 'PSMD5', 'PSME3', 'PTK2', 'RICTOR', 'RNF146', 'ROCK1', 'ROCK2', 'RPS27A', 'RPS6KB1', 'SACM1L', 'SHC1', 'SLC9A3R1', 'SLC9A3R2', 'SOS1', 'STK11', 'STUB1', 'SYNJ1', 'SYNJ2', 'TNKS2', 'TNKS', 'TNRC6A', 'TNRC6B', 'TP53', 'UBB', 'UBC', 'USP13', 'USP7', 'WWP2', 'XIAP', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 0.6084447249063446 Spearman Correlation: 0.5776381482754656 Coefficient of Determination: 0.3702049832663572 RMSE: 0.49716751851349567 NRMSE: 0.0777370836546784 MAPE: 737.5979788028283 Pearson Correlation: -0.04288190174568924 Spearman Correlation: 0.15686274509803924 Coefficient of Determination: -1.355083193146251 RMSE: 0.762198087226132 NRMSE: 0.2512023225977628 MAPE: 266.34944466620453 Predictor: ElasticNet Pearson Correlation: 0.5623811249325736 Spearman Correlation: 0.5574371605245562 Coefficient of Determination: 0.30373375642328493 RMSE: 0.5227461070020132 NRMSE: 0.08173655023094568 MAPE: 444.8854110547382 Pearson Correlation: 0.24759216280661517 Spearman Correlation: 0.29898058725977955 Coefficient of Determination: -0.03378272626452605 RMSE: 0.5049860295911527 NRMSE: 0.16643135903735834 MAPE: 173.4882021047186 Predictor: RandomForests Pearson Correlation: 0.5832693742551751 Spearman Correlation: 0.5373280768749423 Coefficient of Determination: 0.3039091264783117 RMSE: 0.5226802702709819 NRMSE: 0.08172625600359344 MAPE: 361.54939429879863 Pearson Correlation: 0.2936758845392045 Spearman Correlation: 0.3134667275215896 Coefficient of Determination: 0.07044760595945221 RMSE: 0.4788523960287934 NRMSE: 0.15781833630900843 MAPE: 185.36052712411103 Protein: BRCA2 Protein Interaction Partners Count: 100 x_train_column_count: 99 x_train columns: ['ATM', 'ATRIP', 'ATR', 'BARD1', 'BLM', 'BRCA1', 'BRIP1', 'SLX4', 'RHNO1', 'RMI2', 'CDK2', 'CDK4', 'CHEK1', 'CHEK2', 'DMC1', 'DNA2', 'EME1', 'EME2', 'EXO1', 'FANCD2', 'FANCE', 'FANCG', 'FANCI', 'GEN1', 'H2AFX', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HUS1', 'KAT5', 'SPIDR', 'MLH1', 'MLH3', 'MND1', 'MRE11A', 'MSH4', 'MSH5', 'MUS81', 'NBN', 'PALB2', 'PARP1', 'PCNA', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'PSMC3IP', 'RAD17', 'RAD1', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD9A', 'RAD9B', 'RBBP8', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SPO11', 'SYCP3', 'TEX15', 'TOP3A', 'TOPBP1', 'TP53', 'UBA52', 'UBB', 'UBC', 'WRN', 'XRCC2', 'XRCC3', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.5224903786308419 Spearman Correlation: 0.47863791039641596 Coefficient of Determination: 0.27299619576180056 RMSE: 0.16849226023559108 NRMSE: 0.10899580831096677 MAPE: 256.5611455369394 Pearson Correlation: 0.17292506886009132 Spearman Correlation: 0.18939150984248526 Coefficient of Determination: -0.21826325999552276 RMSE: 0.20390082138497753 NRMSE: 0.20406407264309204 MAPE: 243.58121591235684 Predictor: ElasticNet Pearson Correlation: 0.3913160806540943 Spearman Correlation: 0.38262065342607227 Coefficient of Determination: 0.1252371422740095 RMSE: 0.18482332618824815 NRMSE: 0.11956019703482085 MAPE: 161.74487746218156 Pearson Correlation: 0.3477647342233656 Spearman Correlation: 0.3315607398801849 Coefficient of Determination: 0.10044120479679375 RMSE: 0.1752117304118753 NRMSE: 0.1753520120214925 MAPE: 132.4521749572554 Predictor: RandomForests Pearson Correlation: 0.5295849578633959 Spearman Correlation: 0.4423018185215187 Coefficient of Determination: 0.1563190100621723 RMSE: 0.18151007917940512 NRMSE: 0.11741689362516988 MAPE: 150.74681234420754 Pearson Correlation: 0.25929612904848853 Spearman Correlation: 0.2569337832088819 Coefficient of Determination: 0.05061802888745981 RMSE: 0.1799985024195879 NRMSE: 0.18014261651279817 MAPE: 115.58269570345665 Protein: CDKN2A Protein Interaction Partners Count: 100 x_train_column_count: 100 x_train columns: ['ABL1', 'AKT1', 'ARF1', 'BMI1', 'BRCA1', 'CBX7', 'CCND1', 'CCND2', 'CCND3', 'CCNL1', 'CDC45', 'CDC6', 'CDC7', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPB', 'CTCF', 'DAXX', 'E2F1', 'E2F2', 'E2F3', 'EGFR', 'EGR1', 'AGO1', 'AGO3', 'AGO4', 'ERBB2', 'EZH2', 'FOXM1', 'GMNN', 'HDAC1', 'HIF1A', 'HRAS', 'HUWE1', 'IL6', 'KRAS', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAX', 'MCM10', 'MCM2', 'MCM5', 'MDM2', 'MDM4', 'MGMT', 'MLH1', 'MOV10', 'MRAS', 'MTAP', 'MYCN', 'MYC', 'NPM1', 'NRAS', 'ORC5', 'PIK3CA', 'PIK3R1', 'PTEN', 'RASSF1', 'RB1', 'RPS27A', 'RRAS2', 'RRAS', 'RUNX3', 'SMAD3', 'SMAD4', 'SMARCA4', 'SUMO1', 'SUMO2', 'SUMO3', 'TBX2', 'TERT', 'TFDP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TP53', 'TP63', 'TRIP12', 'TWIST1', 'UBA52', 'UBB', 'UBC', 'UBE2I', 'USP7', 'VEGFA', 'WRN', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 0.7137945166764521 Spearman Correlation: 0.6477957992494499 Coefficient of Determination: 0.5095026120373696 RMSE: 0.45012859992749266 NRMSE: 0.1017584717819583 MAPE: 191.8737945060023 Pearson Correlation: 0.554414456679808 Spearman Correlation: 0.4688127987513413 Coefficient of Determination: 0.2880037890462852 RMSE: 0.6302036189402107 NRMSE: 0.17018731270327053 MAPE: 732.5519835894238 Predictor: ElasticNet Pearson Correlation: 0.6863000215247618 Spearman Correlation: 0.6180707065581996 Coefficient of Determination: 0.4592306302392135 RMSE: 0.4726332817194251 NRMSE: 0.10684600016263705 MAPE: 168.37836869234545 Pearson Correlation: 0.6466832028479137 Spearman Correlation: 0.5759828309433227 Coefficient of Determination: 0.4039391410800053 RMSE: 0.5766168824286912 NRMSE: 0.15571614432316805 MAPE: 569.3146040078169 Predictor: RandomForests Pearson Correlation: 0.6512682096034268 Spearman Correlation: 0.5862298214602163 Coefficient of Determination: 0.41559769744228703 RMSE: 0.49133105775668623 NRMSE: 0.11107291912663866 MAPE: 186.81586722629325 Pearson Correlation: 0.7138871852146856 Spearman Correlation: 0.5770326235678206 Coefficient of Determination: 0.4634281612235852 RMSE: 0.5470864888726946 NRMSE: 0.14774142286597208 MAPE: 327.45824804160657 Protein: TP53 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AKT1', 'APAF1', 'ATM', 'ATR', 'AURKA', 'AURKB', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2L1', 'BCL2', 'BCL6', 'BRCA1', 'CASP8', 'CCNA2', 'CCNE1', 'CCNG1', 'CDC25C', 'CDK2', 'CDK5', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CHEK1', 'CHEK2', 'COPS5', 'CREBBP', 'DDB2', 'DDX5', 'DYRK2', 'E2F4', 'EGR1', 'EHMT2', 'EP300', 'EZH2', 'FZR1', 'GADD45A', 'GLS2', 'GSK3B', 'HDAC1', 'HDAC2', 'HIF1A', 'HIPK2', 'HSP90AA1', 'HSPA1A', 'IGFBP3', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'MAPK14', 'MAPK1', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MCL1', 'MDM2', 'MDM4', 'MSH2', 'NGFR', 'NPM1', 'PLK3', 'PMAIP1', 'PPP1R13B', 'PPP1R13L', 'PRKDC', 'PRMT5', 'PTEN', 'RB1', 'RCHY1', 'DROSHA', 'RPA1', 'RRM2B', 'SETD7', 'SETD8', 'SFN', 'SIRT1', 'SMYD2', 'SNAI1', 'SNAI2', 'SP1', 'STAT3', 'STK11', 'SUMO1', 'SUMO2', 'TBP', 'TNFRSF10A', 'TNFRSF10B', 'TP53BP1', 'TP53BP2', 'TP53INP1', 'TP53RK', 'TXN', 'UBE2I', 'USP7', 'WRN', 'XRCC6', 'YY1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.6643682568503029 Spearman Correlation: 0.591699374815362 Coefficient of Determination: 0.4413851807103102 RMSE: 0.33843978817181203 NRMSE: 0.08133616634746745 MAPE: 748.8971530668055 Pearson Correlation: 0.5039282467725872 Spearman Correlation: 0.5015461906155497 Coefficient of Determination: 0.19791589921129216 RMSE: 0.376719439928785 NRMSE: 0.13546673376561005 MAPE: 981.800935097797 Predictor: ElasticNet Pearson Correlation: 0.6155286590002383 Spearman Correlation: 0.5308087580752798 Coefficient of Determination: 0.36366546272034084 RMSE: 0.3612167957925617 NRMSE: 0.086810092716309 MAPE: 706.0754910530303 Pearson Correlation: 0.5153958822903598 Spearman Correlation: 0.5012730465320457 Coefficient of Determination: 0.2633552575652687 RMSE: 0.3610248736845354 NRMSE: 0.12982303343684973 MAPE: 403.33876906311275 Predictor: RandomForests Pearson Correlation: 0.6097534973256057 Spearman Correlation: 0.5139039652587687 Coefficient of Determination: 0.33750018110792934 RMSE: 0.36856837692133904 NRMSE: 0.08857687501113652 MAPE: 615.4124035147506 Pearson Correlation: 0.4836200045164307 Spearman Correlation: 0.46771331891245216 Coefficient of Determination: 0.23275960811854368 RMSE: 0.3684459670531218 NRMSE: 0.13249162754975793 MAPE: 330.3142319701158 Protein: CTNNB1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'AKT1', 'APC2', 'APC', 'AR', 'AXIN1', 'AXIN2', 'BCL9', 'BTRC', 'CASP3', 'CBY1', 'CCND1', 'CDC73', 'CDH11', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDH5', 'CDH8', 'CHD8', 'CREBBP', 'CSNK1A1', 'CSNK1E', 'CTBP1', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNBIP1', 'CTNND1', 'DVL1', 'DVL2', 'DVL3', 'EGFR', 'EGF', 'EP300', 'ERBB2', 'AMER1', 'FBXW11', 'FER', 'FGFR1', 'FOXO1', 'FOXO3', 'FYN', 'FZD1', 'FZD2', 'FZD5', 'GSK3A', 'GSK3B', 'HNF4A', 'IGF1R', 'IQGAP1', 'JUN', 'JUP', 'KDR', 'KLF4', 'LEF1', 'LRP5', 'LRP6', 'MAPK9', 'MEN1', 'MET', 'MMP7', 'MYC', 'NLK', 'NOTCH1', 'PIK3CA', 'PIK3R1', 'PITX2', 'PSEN1', 'PTPN11', 'PTPN1', 'PYGO2', 'RUVBL1', 'SKP1', 'SMAD4', 'SMAD7', 'SMARCA4', 'SOX17', 'SOX2', 'SOX6', 'SOX9', 'SRC', 'TBL1X', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TGFBR1', 'TGFBR2', 'TJP1', 'TLE1', 'VCL', 'VEGFA', 'WNT1', 'WNT3A', 'WNT8A', 'WNT8B', 'YWHAZ', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 0.6711039396421055 Spearman Correlation: 0.6511231739875518 Coefficient of Determination: 0.4503804978031546 RMSE: 0.5465590755337435 NRMSE: 0.11015560705680383 MAPE: 519.1657659772422 Pearson Correlation: 0.39460946763485505 Spearman Correlation: 0.4038484050336553 Coefficient of Determination: 0.0062006382272192795 RMSE: 0.7486259379849937 NRMSE: 0.18573560710191875 MAPE: 421.8561758460576 Predictor: ElasticNet Pearson Correlation: 0.64608679845115 Spearman Correlation: 0.6219195673529426 Coefficient of Determination: 0.4042033291490449 RMSE: 0.5690560945441404 NRMSE: 0.11468974233511507 MAPE: 611.4389427662272 Pearson Correlation: 0.5241574666498763 Spearman Correlation: 0.4922934347868501 Coefficient of Determination: 0.259895353995905 RMSE: 0.6460439722132864 NRMSE: 0.16028481422450414 MAPE: 325.197255709514 Predictor: RandomForests Pearson Correlation: 0.6656992239056829 Spearman Correlation: 0.6133953454672096 Coefficient of Determination: 0.4349807211043826 RMSE: 0.5541631919467963 NRMSE: 0.11168816976979591 MAPE: 329.20271777914945 Pearson Correlation: 0.5336624031149049 Spearman Correlation: 0.4858586622262577 Coefficient of Determination: 0.26869688378404666 RMSE: 0.6421910157662638 NRMSE: 0.15932888794875796 MAPE: 230.86504621225313 Protein: CCNE1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['ABL1', 'BARD1', 'BRCA1', 'CABLES1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNH', 'CCT2', 'CCT3', 'CCT4', 'CCT6A', 'CCT7', 'CDC25A', 'CDC6', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDT1', 'CKS1B', 'CKS2', 'CUL1', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'EP400', 'FOXM1', 'HDAC1', 'IFNAR1', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'MNAT1', 'MYC', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PCNA', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB7', 'PSMC1', 'PSMC2', 'PSMC4', 'PSMC5', 'PSMD10', 'PSMD11', 'PSMD14', 'PSMD1', 'PSMD3', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSME3', 'PTK6', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RHOA', 'RPS27A', 'RRN3', 'SKP1', 'SKP2', 'STAT5A', 'STAT5B', 'TCP1', 'TFDP1', 'TP53', 'TP73', 'UBB', 'UBC', 'WEE1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.8774175459671834 Spearman Correlation: 0.7204934647632695 Coefficient of Determination: 0.7698615499710739 RMSE: 0.23203034435425016 NRMSE: 0.055995932223435615 MAPE: 55.51363160698006 Pearson Correlation: 0.8048281276095113 Spearman Correlation: 0.6018242122719735 Coefficient of Determination: 0.6373795512018192 RMSE: 0.3233946234518692 NRMSE: 0.11518953640315911 MAPE: 49.11125227139962 Predictor: ElasticNet Pearson Correlation: 0.8494049357808329 Spearman Correlation: 0.7030487309918062 Coefficient of Determination: 0.7153946227542647 RMSE: 0.2580309155025536 NRMSE: 0.06227065557413751 MAPE: 59.33609747546609 Pearson Correlation: 0.832812353521449 Spearman Correlation: 0.5990976490098529 Coefficient of Determination: 0.678943083022403 RMSE: 0.30429699615974476 NRMSE: 0.10838717583606225 MAPE: 46.92540409237578 Predictor: RandomForests Pearson Correlation: 0.8568325247662703 Spearman Correlation: 0.7204752981992786 Coefficient of Determination: 0.7283520088609318 RMSE: 0.25208873649532704 NRMSE: 0.06083662825381351 MAPE: 54.930323127980664 Pearson Correlation: 0.837816825298056 Spearman Correlation: 0.7059538137469166 Coefficient of Determination: 0.6986948888904203 RMSE: 0.29478806689977877 NRMSE: 0.10500020192334061 MAPE: 44.001700036877104 Protein: CCND1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ACTL6A', 'AKT1', 'ARID1A', 'ARID2', 'AR', 'ATF2', 'BRD2', 'BTG2', 'CCNA1', 'CCNB1', 'CCNE1', 'CCNH', 'CDC25A', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CKS1B', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUL1', 'DNMT3A', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'AGO2', 'EP300', 'ESR1', 'FOS', 'FOXA1', 'FOXM1', 'GADD45A', 'GATA3', 'GLI1', 'GLI3', 'GSK3B', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC4', 'HIST1H2BA', 'HIST2H2BE', 'HNF1A', 'IFNAR1', 'JAK2', 'JUN', 'KAT2B', 'LEF1', 'LYN', 'MAML1', 'MYB', 'MYC', 'NOTCH1', 'PBRM1', 'PCNA', 'PRMT5', 'PSMA6', 'PSMC6', 'PSMD10', 'PSMD6', 'PSMD7', 'PSME3', 'PTK6', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RELA', 'RUNX1', 'RUNX3', 'SKP1', 'SKP2', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'SUV39H1', 'TCF7L2', 'TFDP1', 'TP53', 'WDR77', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 0.5636707126515218 Spearman Correlation: 0.5338794000240731 Coefficient of Determination: 0.3177246723010745 RMSE: 0.19732635215636038 NRMSE: 0.1186268964881752 MAPE: 303.90890385330357 Pearson Correlation: 0.4724393318736661 Spearman Correlation: 0.37750951126719345 Coefficient of Determination: -0.03747489524555547 RMSE: 0.23930914416114024 NRMSE: 0.17043839678731998 MAPE: 1816.1890371613786 Predictor: ElasticNet Pearson Correlation: 0.4613775548393183 Spearman Correlation: 0.4341449882735381 Coefficient of Determination: 0.19503850236219866 RMSE: 0.21433485826074286 NRMSE: 0.1288519184936714 MAPE: 348.4022575498325 Pearson Correlation: 0.49529133813763926 Spearman Correlation: 0.4935664813188957 Coefficient of Determination: 0.22349508669843154 RMSE: 0.20703444163010268 NRMSE: 0.14745202668658672 MAPE: 1261.57282919059 Predictor: RandomForests Pearson Correlation: 0.5396287154639029 Spearman Correlation: 0.502939768100025 Coefficient of Determination: 0.24994905002118484 RMSE: 0.20689530563231137 NRMSE: 0.12437947459589964 MAPE: 321.9495425031968 Pearson Correlation: 0.5113924341245587 Spearman Correlation: 0.5230886292665937 Coefficient of Determination: 0.2479354192270824 RMSE: 0.2037502091357217 NRMSE: 0.14511296303324717 MAPE: 1056.0884306207543 Protein: ERBB2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ADAM17', 'ADRB2', 'AREG', 'ARHGEF11', 'ARHGEF12', 'BTC', 'CBL', 'CCND1', 'CD44', 'CDC37', 'CDH1', 'CTNNB1', 'CTNND1', 'CUL5', 'DIAPH1', 'DOCK7', 'EGFR', 'EGF', 'ERBB2IP', 'ERBB3', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FYN', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IL6R', 'IL6', 'INS', 'JAK1', 'JAK2', 'KRAS', 'LRPPRC', 'MAP2K1', 'MAPK8', 'MATK', 'MEMO1', 'MUC1', 'MUC4', 'MYC', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'PGAP3', 'PGR', 'PIK3CA', 'PIK3CB', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PLXNB1', 'PRKACA', 'PTEN', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'RHOA', 'RHOB', 'RHOC', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'RPS27A', 'SEMA4D', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SRC', 'STAT1', 'STAT3', 'STUB1', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TGFA', 'TP53', 'UBA52', 'UBB', 'UBC', 'VEGFA', 'YES1', 'YY1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 0.8555656786123722 Spearman Correlation: 0.7304635390805553 Coefficient of Determination: 0.7319926304194486 RMSE: 0.5276014401097882 NRMSE: 0.08988558872000071 MAPE: 539.7970442294167 Pearson Correlation: 0.7211630034474006 Spearman Correlation: 0.5739196175982831 Coefficient of Determination: 0.4888452610751236 RMSE: 0.6484893794185121 NRMSE: 0.12024650091201783 MAPE: 331.1315976607193 Predictor: ElasticNet Pearson Correlation: 0.8423851930311954 Spearman Correlation: 0.7139346121798521 Coefficient of Determination: 0.7063319654276607 RMSE: 0.5522820681243297 NRMSE: 0.09409033990226581 MAPE: 614.1789734076259 Pearson Correlation: 0.8015660296075642 Spearman Correlation: 0.644249341527656 Coefficient of Determination: 0.6349787051468279 RMSE: 0.5480065795274097 NRMSE: 0.10161442231177632 MAPE: 259.892405319557 Predictor: RandomForests Pearson Correlation: 0.8433007690847746 Spearman Correlation: 0.6562328792592249 Coefficient of Determination: 0.7083630081806649 RMSE: 0.5503689305629248 NRMSE: 0.09376440543178098 MAPE: 460.06554811053206 Pearson Correlation: 0.8169954335116215 Spearman Correlation: 0.714499680796803 Coefficient of Determination: 0.6561677185767817 RMSE: 0.5318632665691463 NRMSE: 0.09862103960117677 MAPE: 307.5359921183597 Protein: ERBB3 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AKT2', 'ANGPT1', 'ANGPT2', 'AREG', 'AR', 'BDNF', 'BMP4', 'BTC', 'CBLB', 'CBL', 'CCND1', 'CDH1', 'CSF1', 'CSK', 'CTNNB1', 'DCN', 'DOCK7', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FGF10', 'FGF19', 'FGF1', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FIGF', 'FLNA', 'FOXO3', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IGF1', 'IGF2', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'JAK1', 'JAK2', 'KITLG', 'KRAS', 'LAMA1', 'LAMB1', 'LAMC2', 'MAP2K1', 'MAPK8', 'MET', 'MUC4', 'NGF', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NTF3', 'PA2G4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PRKACA', 'PTEN', 'PTPN11', 'RNF41', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SOX10', 'SRC', 'TGFA', 'VEGFA', 'VEGFB', 'VEGFC', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.5846385774030325 Spearman Correlation: 0.5814912548696802 Coefficient of Determination: 0.3418022661878414 RMSE: 0.37249594530387053 NRMSE: 0.10052596439962286 MAPE: 197.4956683796782 Pearson Correlation: 0.31201395918673225 Spearman Correlation: 0.3620139035388307 Coefficient of Determination: -0.32057965389540044 RMSE: 0.5349581227215473 NRMSE: 0.214656411595382 MAPE: 299.0531773906646 Predictor: ElasticNet Pearson Correlation: 0.5339325171646093 Spearman Correlation: 0.5364698698338389 Coefficient of Determination: 0.274475363125529 RMSE: 0.3910834526246887 NRMSE: 0.10554219913389899 MAPE: 196.55289204715226 Pearson Correlation: 0.47349811161578015 Spearman Correlation: 0.46591121099343363 Coefficient of Determination: 0.2214687045235879 RMSE: 0.4107480617792209 NRMSE: 0.16481608796354202 MAPE: 256.92840309105964 Predictor: RandomForests Pearson Correlation: 0.5491289717277127 Spearman Correlation: 0.5567681894241043 Coefficient of Determination: 0.2845656695305143 RMSE: 0.38835441470699494 NRMSE: 0.10480571012772871 MAPE: 239.9856680316148 Pearson Correlation: 0.38648227930029155 Spearman Correlation: 0.39234560614965885 Coefficient of Determination: 0.13952978922040327 RMSE: 0.4318226369637922 NRMSE: 0.17327243714841428 MAPE: 281.07626847574466 Fold: 2 Protein: RB1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AATF', 'ABL1', 'AKT1', 'AR', 'ASF1A', 'ATF2', 'BGLAP', 'CASP3', 'CBX4', 'CCNA1', 'CCNA2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CEBPA', 'COL1A1', 'CREBBP', 'CTBP1', 'DNMT1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'ELF1', 'EP300', 'FOXM1', 'FZR1', 'GNB2L1', 'H1F0', 'H2AFV', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HIST1H2BA', 'HIST2H2AC', 'HIST2H2BE', 'HMGA1', 'HMGA2', 'HSP90AA1', 'ID2', 'JUN', 'MAPK14', 'MAPK1', 'MAPK3', 'MDM2', 'MEF2C', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NFYC', 'PCNA', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP2CA', 'PPP2CB', 'PRIM1', 'PRIM2', 'RAF1', 'RBBP4', 'RUNX2', 'SIRT1', 'SKP2', 'SMARCA2', 'SMC2', 'SMC4', 'SP100', 'SP1', 'SP3', 'SPI1', 'SUV39H1', 'TAF1', 'TBP', 'TERT', 'TFDP1', 'TP53BP1', 'TP53', 'TP73', 'YAP1', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.48515114431377127 Spearman Correlation: 0.4992861387234251 Coefficient of Determination: 0.23537163282896179 RMSE: 0.20552709508679162 NRMSE: 0.07516350756538605 MAPE: 331.03572520617996 Pearson Correlation: 0.0700112146437102 Spearman Correlation: 0.12819237147595358 Coefficient of Determination: -0.4021783209687544 RMSE: 0.289999713238955 NRMSE: 0.16614895740793334 MAPE: 600.3215095911272 Predictor: ElasticNet Pearson Correlation: 0.361902121927769 Spearman Correlation: 0.3961463579901162 Coefficient of Determination: 0.11468601468954931 RMSE: 0.2211528514720892 NRMSE: 0.08087801765363123 MAPE: 175.3297831206204 Pearson Correlation: 0.09844668314934836 Spearman Correlation: 0.12141254511754952 Coefficient of Determination: -0.02243748440111304 RMSE: 0.2476363110788918 NRMSE: 0.14187777788663578 MAPE: 304.37946693340297 Predictor: RandomForests Pearson Correlation: 0.5145515038742902 Spearman Correlation: 0.44009892078456364 Coefficient of Determination: 0.18599802934655563 RMSE: 0.21205895119023704 NRMSE: 0.07755227881445181 MAPE: 148.26230932920876 Pearson Correlation: 0.08824190881128072 Spearman Correlation: 0.144200741635974 Coefficient of Determination: -0.030911896992970034 RMSE: 0.2486604527794585 NRMSE: 0.14246453734886647 MAPE: 222.7265029350453 Protein: CDH1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ACTA1', 'ACTN1', 'ADAM10', 'ADAM15', 'CA2', 'CASP3', 'CBLL1', 'CDC42', 'CDH17', 'CDH3', 'CDH5', 'CTBP1', 'CTNNA1', 'CTNNB1', 'CTNND1', 'CTTN', 'DLG1', 'EFNA1', 'EGFR', 'EGF', 'ENAH', 'EPCAM', 'EPHA2', 'EXOC3', 'EXOC4', 'FER', 'FLOT1', 'FLOT2', 'FMN1', 'FYN', 'GDNF', 'GNA12', 'GNA13', 'HGF', 'HGS', 'IGF1R', 'IGF1', 'IGF2', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'ITGA6', 'ITGAE', 'ITGB4', 'ITGB7', 'AJUBA', 'JUP', 'KIFC3', 'KLK7', 'KLRG1', 'LAMB1', 'LAMC2', 'LIMA1', 'MAPK1', 'MAPK3', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MLLT4', 'MMP3', 'MMP7', 'MMP9', 'MYO6', 'NCSTN', 'NUMB', 'PARD6A', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PLEKHA7', 'PLG', 'PRKCI', 'PRKCZ', 'PSEN1', 'PVRL1', 'PVRL2', 'RAB5A', 'RAB7A', 'RAC1', 'RAP1A', 'RET', 'RHOA', 'SKIL', 'SMAD3', 'SMAD4', 'SNAI1', 'SNAI2', 'SNAI3', 'SRC', 'STX4', 'TJP1', 'TWIST1', 'VASP', 'VCL', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.7349167752386903 Spearman Correlation: 0.6765257583652421 Coefficient of Determination: 0.5401026665272355 RMSE: 0.7599412695880011 NRMSE: 0.12191245200737966 MAPE: 482.1119431661998 Pearson Correlation: 0.5693822176733233 Spearman Correlation: 0.5928397229538582 Coefficient of Determination: 0.21841195505459066 RMSE: 1.0172339438898597 NRMSE: 0.18064889786713897 MAPE: 301.55409599104684 Predictor: ElasticNet Pearson Correlation: 0.7040420729658468 Spearman Correlation: 0.6770259727096072 Coefficient of Determination: 0.4825442995898377 RMSE: 0.8060948974945505 NRMSE: 0.12931657936866134 MAPE: 525.1668009371625 Pearson Correlation: 0.6907689941316579 Spearman Correlation: 0.712379280070237 Coefficient of Determination: 0.45102604343925035 RMSE: 0.8525262509903311 NRMSE: 0.1513987304191673 MAPE: 234.3459665760564 Predictor: RandomForests Pearson Correlation: 0.7657638215665736 Spearman Correlation: 0.6800217599102509 Coefficient of Determination: 0.5819542149538295 RMSE: 0.7245385687012473 NRMSE: 0.11623302618131826 MAPE: 184.24380781842135 Pearson Correlation: 0.6576120370348326 Spearman Correlation: 0.6605306799336651 Coefficient of Determination: 0.39849349648966426 RMSE: 0.8923845719810481 NRMSE: 0.15847710388581923 MAPE: 209.07905470487273 Protein: CDH2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ADAM10', 'AFP', 'AHSG', 'ALB', 'APLP2', 'APOA1', 'APOB', 'APOE', 'APP', 'AXIN1', 'BDNF', 'BMP4', 'BNIP2', 'CALU', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH17', 'CDH18', 'CDH1', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDON', 'CREBBP', 'CSF1', 'CST3', 'CTNNA1', 'CTNNA2', 'CTNNB1', 'CTNND1', 'CYR61', 'FAM20C', 'FBN1', 'FER', 'FGFR1', 'FN1', 'FSTL1', 'GAS6', 'GJA1', 'GOLM1', 'GPC3', 'GRIA2', 'HSP90B1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL6', 'ITIH2', 'JUP', 'KIF5B', 'KNG1', 'KTN1', 'LAMB1', 'LAMC1', 'LGALS1', 'LRP5', 'LTBP1', 'MAP2K6', 'MAPK11', 'MAPK14', 'MATN3', 'MEF2A', 'MEF2C', 'MEF2D', 'MET', 'MFGE8', 'MSLN', 'NTRK2', 'P4HB', 'PCSK9', 'PIK3CA', 'PIK3R1', 'PTPN11', 'PTPN1', 'RAC1', 'RHOA', 'ROBO1', 'SCG2', 'SDC2', 'SERPINA1', 'SLIT1', 'SNAI1', 'SNAI2', 'SPAG9', 'SPARCL1', 'SPP1', 'STC2', 'TCF3', 'TIMP1', 'TMEM132A', 'TNC', 'VCAN', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.46156028024810203 Spearman Correlation: 0.44959855956861483 Coefficient of Determination: 0.21303789230270642 RMSE: 0.3265432464956123 NRMSE: 0.1183213444798943 MAPE: 1499.050500063464 Pearson Correlation: 0.26852496179196506 Spearman Correlation: 0.18965466783728419 Coefficient of Determination: -0.09594961801680446 RMSE: 0.4052252049481126 NRMSE: 0.21348204056966058 MAPE: 474.72825292722564 Predictor: ElasticNet Pearson Correlation: 0.38809345118404176 Spearman Correlation: 0.3939766983798443 Coefficient of Determination: 0.13181629549122476 RMSE: 0.34298064318814225 NRMSE: 0.1242773545866158 MAPE: 592.4037566925881 Pearson Correlation: 0.3533845326944078 Spearman Correlation: 0.3191834942932397 Coefficient of Determination: 0.1077358508788091 RMSE: 0.3656350977707727 NRMSE: 0.19262505348349868 MAPE: 166.9994975461775 Predictor: RandomForests Pearson Correlation: 0.4799743358651429 Spearman Correlation: 0.4323148940473525 Coefficient of Determination: 0.14902348384999164 RMSE: 0.339564736706981 NRMSE: 0.12303961761974819 MAPE: 687.0139270423969 Pearson Correlation: 0.15572243257091797 Spearman Correlation: 0.3593795727246123 Coefficient of Determination: 0.005646737838464477 RMSE: 0.3859859594963049 NRMSE: 0.20334635964971784 MAPE: 213.683578517477 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.5750222934418497 Spearman Correlation: 0.5464477708979472 Coefficient of Determination: 0.33065063795512506 RMSE: 0.16993269557651747 NRMSE: 0.12789106558632488 MAPE: 280.5599204068399 Pearson Correlation: 0.15129344217314186 Spearman Correlation: 0.33341137450004876 Coefficient of Determination: -0.454023866366031 RMSE: 0.23866673811947609 NRMSE: 0.19638503918330957 MAPE: 1617.359666454866 Predictor: ElasticNet Pearson Correlation: 0.508310698807099 Spearman Correlation: 0.5129329823179457 Coefficient of Determination: 0.2426565430808516 RMSE: 0.18075776318495312 NRMSE: 0.13603799356148585 MAPE: 237.0882024645646 Pearson Correlation: 0.2675737940154392 Spearman Correlation: 0.342054433713784 Coefficient of Determination: -0.07560325265547219 RMSE: 0.2052731673488429 NRMSE: 0.16890740339738577 MAPE: 1506.8127446414048 Predictor: RandomForests Pearson Correlation: 0.5643420869215559 Spearman Correlation: 0.5595064484259596 Coefficient of Determination: 0.2915569262179636 RMSE: 0.17482478344760996 NRMSE: 0.1315728428255627 MAPE: 361.8509709984862 Pearson Correlation: 0.26611478629025903 Spearman Correlation: 0.37114427860696525 Coefficient of Determination: -0.07708413457356866 RMSE: 0.20541442796788412 NRMSE: 0.1690236385813249 MAPE: 1459.15447534378 Protein: PTEN Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AR', 'BCR', 'CD79A', 'CD79B', 'CDIPT', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'DLG1', 'EGFR', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'FOXO3', 'FOXO4', 'FRK', 'GRB2', 'HRAS', 'INPP4A', 'INPP4B', 'INPP5B', 'INPP5D', 'INPP5J', 'INPP5K', 'INPPL1', 'IPMK', 'IRS1', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'MAST2', 'MDM2', 'MDM4', 'MKRN1', 'MTOR', 'MYC', 'NEDD4', 'NOTCH1', 'OCRL', 'OTUD3', 'PARK7', 'PDGFB', 'PDGFRB', 'PI4K2A', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIKFYVE', 'PIP4K2A', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PML', 'PREX2', 'PSMA6', 'PSMA7', 'PSMB9', 'PSMC6', 'PSMD10', 'PSMD5', 'PSME3', 'PTK2', 'RICTOR', 'RNF146', 'ROCK1', 'ROCK2', 'RPS27A', 'RPS6KB1', 'SACM1L', 'SHC1', 'SLC9A3R1', 'SLC9A3R2', 'SOS1', 'STK11', 'STUB1', 'SYNJ1', 'SYNJ2', 'TNKS2', 'TNKS', 'TNRC6A', 'TNRC6B', 'TP53', 'UBB', 'UBC', 'USP13', 'USP7', 'WWP2', 'XIAP', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.596441655809652 Spearman Correlation: 0.5860208262750544 Coefficient of Determination: 0.35574264878495965 RMSE: 0.5006566468385097 NRMSE: 0.07828264355226483 MAPE: 483.7079598800732 Pearson Correlation: 0.3066570066417869 Spearman Correlation: 0.25554580040971614 Coefficient of Determination: -0.26303662784338044 RMSE: 0.5749950618438691 NRMSE: 0.19284782058085226 MAPE: 2320.5107407582022 Predictor: ElasticNet Pearson Correlation: 0.5508981252392146 Spearman Correlation: 0.5592522682841322 Coefficient of Determination: 0.29132691325073834 RMSE: 0.5250894165288521 NRMSE: 0.08210294996933032 MAPE: 356.4977922215284 Pearson Correlation: 0.37614714175677727 Spearman Correlation: 0.34778070432152963 Coefficient of Determination: 0.09678321067715356 RMSE: 0.48624163517040986 NRMSE: 0.16308077380279376 MAPE: 661.6345018124946 Predictor: RandomForests Pearson Correlation: 0.5753336243669441 Spearman Correlation: 0.524772713757397 Coefficient of Determination: 0.30205576568971204 RMSE: 0.5210995005782082 NRMSE: 0.0814790869483556 MAPE: 266.8419485584841 Pearson Correlation: 0.2937978053660253 Spearman Correlation: 0.3148969899254314 Coefficient of Determination: 0.06599378271861733 RMSE: 0.49445984215507816 NRMSE: 0.1658370814847995 MAPE: 485.3068733725973 Protein: BRCA2 Protein Interaction Partners Count: 100 x_train_column_count: 99 x_train columns: ['ATM', 'ATRIP', 'ATR', 'BARD1', 'BLM', 'BRCA1', 'BRIP1', 'SLX4', 'RHNO1', 'RMI2', 'CDK2', 'CDK4', 'CHEK1', 'CHEK2', 'DMC1', 'DNA2', 'EME1', 'EME2', 'EXO1', 'FANCD2', 'FANCE', 'FANCG', 'FANCI', 'GEN1', 'H2AFX', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HUS1', 'KAT5', 'SPIDR', 'MLH1', 'MLH3', 'MND1', 'MRE11A', 'MSH4', 'MSH5', 'MUS81', 'NBN', 'PALB2', 'PARP1', 'PCNA', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'PSMC3IP', 'RAD17', 'RAD1', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD9A', 'RAD9B', 'RBBP8', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SPO11', 'SYCP3', 'TEX15', 'TOP3A', 'TOPBP1', 'TP53', 'UBA52', 'UBB', 'UBC', 'WRN', 'XRCC2', 'XRCC3', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.5303131589227363 Spearman Correlation: 0.48286116737715845 Coefficient of Determination: 0.2812320465266114 RMSE: 0.1655963811106799 NRMSE: 0.10668151464691893 MAPE: 262.16097699001284 Pearson Correlation: 0.1481306570650421 Spearman Correlation: 0.15685786752511952 Coefficient of Determination: -0.2805010738361844 RMSE: 0.21860977061655476 NRMSE: 0.1479762616453702 MAPE: 532.6878069544787 Predictor: ElasticNet Pearson Correlation: 0.41058744282336646 Spearman Correlation: 0.4155548617389634 Coefficient of Determination: 0.14154423061736754 RMSE: 0.18097369375669758 NRMSE: 0.11658798116070065 MAPE: 176.6559305302728 Pearson Correlation: 0.24063527690505304 Spearman Correlation: 0.2501853477709492 Coefficient of Determination: 0.04038606401345912 RMSE: 0.18924650523000913 NRMSE: 0.12810036026480823 MAPE: 161.38274881023176 Predictor: RandomForests Pearson Correlation: 0.5464276865949703 Spearman Correlation: 0.4667890971397747 Coefficient of Determination: 0.16976237956047002 RMSE: 0.1779744637630843 NRMSE: 0.11465579884882222 MAPE: 166.15437071332846 Pearson Correlation: 0.16705348570371462 Spearman Correlation: 0.21473027021753976 Coefficient of Determination: 0.00883631884128544 RMSE: 0.19233232652571014 NRMSE: 0.1301891429306317 MAPE: 127.59241320169126 Protein: CDKN2A Protein Interaction Partners Count: 100 x_train_column_count: 100 x_train columns: ['ABL1', 'AKT1', 'ARF1', 'BMI1', 'BRCA1', 'CBX7', 'CCND1', 'CCND2', 'CCND3', 'CCNL1', 'CDC45', 'CDC6', 'CDC7', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPB', 'CTCF', 'DAXX', 'E2F1', 'E2F2', 'E2F3', 'EGFR', 'EGR1', 'AGO1', 'AGO3', 'AGO4', 'ERBB2', 'EZH2', 'FOXM1', 'GMNN', 'HDAC1', 'HIF1A', 'HRAS', 'HUWE1', 'IL6', 'KRAS', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAX', 'MCM10', 'MCM2', 'MCM5', 'MDM2', 'MDM4', 'MGMT', 'MLH1', 'MOV10', 'MRAS', 'MTAP', 'MYCN', 'MYC', 'NPM1', 'NRAS', 'ORC5', 'PIK3CA', 'PIK3R1', 'PTEN', 'RASSF1', 'RB1', 'RPS27A', 'RRAS2', 'RRAS', 'RUNX3', 'SMAD3', 'SMAD4', 'SMARCA4', 'SUMO1', 'SUMO2', 'SUMO3', 'TBX2', 'TERT', 'TFDP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TP53', 'TP63', 'TRIP12', 'TWIST1', 'UBA52', 'UBB', 'UBC', 'UBE2I', 'USP7', 'VEGFA', 'WRN', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.715641128579177 Spearman Correlation: 0.648686950907236 Coefficient of Determination: 0.5121422249140785 RMSE: 0.4633253661861893 NRMSE: 0.10474180313918599 MAPE: 236.45293196100562 Pearson Correlation: 0.5329176555029486 Spearman Correlation: 0.5312896302799728 Coefficient of Determination: -0.7956323076018723 RMSE: 0.9024074160287016 NRMSE: 0.24378847418108426 MAPE: 241.28533353845688 Predictor: ElasticNet Pearson Correlation: 0.6818661330203777 Spearman Correlation: 0.6102790134393761 Coefficient of Determination: 0.456447294557523 RMSE: 0.48905791624238787 NRMSE: 0.11055904063352273 MAPE: 278.2076669307556 Pearson Correlation: 0.6405598902587765 Spearman Correlation: 0.5203833772314896 Coefficient of Determination: 0.40114840680903385 RMSE: 0.5211389756300177 NRMSE: 0.1407874907148308 MAPE: 146.6647222794165 Predictor: RandomForests Pearson Correlation: 0.6584895094447617 Spearman Correlation: 0.5891147738605967 Coefficient of Determination: 0.4207427885264894 RMSE: 0.5048649102539812 NRMSE: 0.11413245399660475 MAPE: 178.6375203118971 Pearson Correlation: 0.7144224068256434 Spearman Correlation: 0.6207392720481201 Coefficient of Determination: 0.4728247406407804 RMSE: 0.488957892315898 NRMSE: 0.13209366012424303 MAPE: 188.25709460942753 Protein: TP53 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AKT1', 'APAF1', 'ATM', 'ATR', 'AURKA', 'AURKB', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2L1', 'BCL2', 'BCL6', 'BRCA1', 'CASP8', 'CCNA2', 'CCNE1', 'CCNG1', 'CDC25C', 'CDK2', 'CDK5', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CHEK1', 'CHEK2', 'COPS5', 'CREBBP', 'DDB2', 'DDX5', 'DYRK2', 'E2F4', 'EGR1', 'EHMT2', 'EP300', 'EZH2', 'FZR1', 'GADD45A', 'GLS2', 'GSK3B', 'HDAC1', 'HDAC2', 'HIF1A', 'HIPK2', 'HSP90AA1', 'HSPA1A', 'IGFBP3', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'MAPK14', 'MAPK1', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MCL1', 'MDM2', 'MDM4', 'MSH2', 'NGFR', 'NPM1', 'PLK3', 'PMAIP1', 'PPP1R13B', 'PPP1R13L', 'PRKDC', 'PRMT5', 'PTEN', 'RB1', 'RCHY1', 'DROSHA', 'RPA1', 'RRM2B', 'SETD7', 'SETD8', 'SFN', 'SIRT1', 'SMYD2', 'SNAI1', 'SNAI2', 'SP1', 'STAT3', 'STK11', 'SUMO1', 'SUMO2', 'TBP', 'TNFRSF10A', 'TNFRSF10B', 'TP53BP1', 'TP53BP2', 'TP53INP1', 'TP53RK', 'TXN', 'UBE2I', 'USP7', 'WRN', 'XRCC6', 'YY1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 0.6525223438001392 Spearman Correlation: 0.5866541454218444 Coefficient of Determination: 0.4257854091584269 RMSE: 0.34502935583659167 NRMSE: 0.09241445181105978 MAPE: 471.44946086361364 Pearson Correlation: 0.45384377011628824 Spearman Correlation: 0.46975417032484645 Coefficient of Determination: 0.041356077364618216 RMSE: 0.4008288574966461 NRMSE: 0.1320035756616651 MAPE: 2630.563021646303 Predictor: ElasticNet Pearson Correlation: 0.6012970206546818 Spearman Correlation: 0.5299243744477568 Coefficient of Determination: 0.346093999628189 RMSE: 0.3681939064696009 NRMSE: 0.09861896517198364 MAPE: 328.5372490537253 Pearson Correlation: 0.5338843071899683 Spearman Correlation: 0.47090527753389916 Coefficient of Determination: 0.2740883351121981 RMSE: 0.348796571006724 NRMSE: 0.11486796344696987 MAPE: 2315.7937697029083 Predictor: RandomForests Pearson Correlation: 0.6211946355828277 Spearman Correlation: 0.5590174471190383 Coefficient of Determination: 0.3494121420579812 RMSE: 0.3672585475468717 NRMSE: 0.09836843378783225 MAPE: 362.91345345811743 Pearson Correlation: 0.5917300916878822 Spearman Correlation: 0.5117451955906741 Coefficient of Determination: 0.31763080129622556 RMSE: 0.3381738537731816 NRMSE: 0.11136962087046981 MAPE: 1968.2726048276872 Protein: CTNNB1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'AKT1', 'APC2', 'APC', 'AR', 'AXIN1', 'AXIN2', 'BCL9', 'BTRC', 'CASP3', 'CBY1', 'CCND1', 'CDC73', 'CDH11', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDH5', 'CDH8', 'CHD8', 'CREBBP', 'CSNK1A1', 'CSNK1E', 'CTBP1', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNBIP1', 'CTNND1', 'DVL1', 'DVL2', 'DVL3', 'EGFR', 'EGF', 'EP300', 'ERBB2', 'AMER1', 'FBXW11', 'FER', 'FGFR1', 'FOXO1', 'FOXO3', 'FYN', 'FZD1', 'FZD2', 'FZD5', 'GSK3A', 'GSK3B', 'HNF4A', 'IGF1R', 'IQGAP1', 'JUN', 'JUP', 'KDR', 'KLF4', 'LEF1', 'LRP5', 'LRP6', 'MAPK9', 'MEN1', 'MET', 'MMP7', 'MYC', 'NLK', 'NOTCH1', 'PIK3CA', 'PIK3R1', 'PITX2', 'PSEN1', 'PTPN11', 'PTPN1', 'PYGO2', 'RUVBL1', 'SKP1', 'SMAD4', 'SMAD7', 'SMARCA4', 'SOX17', 'SOX2', 'SOX6', 'SOX9', 'SRC', 'TBL1X', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TGFBR1', 'TGFBR2', 'TJP1', 'TLE1', 'VCL', 'VEGFA', 'WNT1', 'WNT3A', 'WNT8A', 'WNT8B', 'YWHAZ', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.6518527799980557 Spearman Correlation: 0.6309058981105952 Coefficient of Determination: 0.4249120467911932 RMSE: 0.549788067319096 NRMSE: 0.10814084723034935 MAPE: 341.5427138389455 Pearson Correlation: 0.5252194586548198 Spearman Correlation: 0.5553409423470882 Coefficient of Determination: 0.1808687711028265 RMSE: 0.6937584361651111 NRMSE: 0.17265833009758622 MAPE: 421.55131205370225 Predictor: ElasticNet Pearson Correlation: 0.6298254241127845 Spearman Correlation: 0.6022661260967602 Coefficient of Determination: 0.3857013721670619 RMSE: 0.5682218727278424 NRMSE: 0.11176669408494147 MAPE: 453.04613452290187 Pearson Correlation: 0.5415036085785768 Spearman Correlation: 0.5799726855916496 Coefficient of Determination: 0.20928193451479637 RMSE: 0.6816200645654589 NRMSE: 0.16963740687525422 MAPE: 267.47669342685845 Predictor: RandomForests Pearson Correlation: 0.6609651932376164 Spearman Correlation: 0.5862416152305238 Coefficient of Determination: 0.428352896454669 RMSE: 0.5481408616864913 NRMSE: 0.10781684926956951 MAPE: 409.6430696817524 Pearson Correlation: 0.5587501084007931 Spearman Correlation: 0.5378433053404952 Coefficient of Determination: 0.26870075000231564 RMSE: 0.6555096651182158 NRMSE: 0.16313921134820336 MAPE: 194.44824700933106 Protein: CCNE1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['ABL1', 'BARD1', 'BRCA1', 'CABLES1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNH', 'CCT2', 'CCT3', 'CCT4', 'CCT6A', 'CCT7', 'CDC25A', 'CDC6', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDT1', 'CKS1B', 'CKS2', 'CUL1', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'EP400', 'FOXM1', 'HDAC1', 'IFNAR1', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'MNAT1', 'MYC', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PCNA', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB7', 'PSMC1', 'PSMC2', 'PSMC4', 'PSMC5', 'PSMD10', 'PSMD11', 'PSMD14', 'PSMD1', 'PSMD3', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSME3', 'PTK6', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RHOA', 'RPS27A', 'RRN3', 'SKP1', 'SKP2', 'STAT5A', 'STAT5B', 'TCP1', 'TFDP1', 'TP53', 'TP73', 'UBB', 'UBC', 'WEE1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.8839824869271016 Spearman Correlation: 0.7060161780016073 Coefficient of Determination: 0.781425037193823 RMSE: 0.2397428062050311 NRMSE: 0.05785718227792338 MAPE: 57.100524501823315 Pearson Correlation: 0.7248083286506802 Spearman Correlation: 0.6715296068676226 Coefficient of Determination: 0.4140416847806997 RMSE: 0.32017950563235464 NRMSE: 0.17401154660207646 MAPE: 54.27946891345841 Predictor: ElasticNet Pearson Correlation: 0.8612847086308436 Spearman Correlation: 0.6778905701089455 Coefficient of Determination: 0.7360261808671118 RMSE: 0.263466744872617 NRMSE: 0.06358248542911335 MAPE: 62.18207625720527 Pearson Correlation: 0.7946055063205602 Spearman Correlation: 0.6918251877865574 Coefficient of Determination: 0.6257737006156978 RMSE: 0.25587468523057666 NRMSE: 0.13906308470729553 MAPE: 45.69282652993146 Predictor: RandomForests Pearson Correlation: 0.8593755817851706 Spearman Correlation: 0.7111903038157923 Coefficient of Determination: 0.7339078258100613 RMSE: 0.26452177540838345 NRMSE: 0.06383709617211271 MAPE: 68.13230141279159 Pearson Correlation: 0.837300844103151 Spearman Correlation: 0.7371394425134778 Coefficient of Determination: 0.6982205640864202 RMSE: 0.2297761720882395 NRMSE: 0.12487903308617956 MAPE: 40.40251932527539 Protein: CCND1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ACTL6A', 'AKT1', 'ARID1A', 'ARID2', 'AR', 'ATF2', 'BRD2', 'BTG2', 'CCNA1', 'CCNB1', 'CCNE1', 'CCNH', 'CDC25A', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CKS1B', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUL1', 'DNMT3A', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'AGO2', 'EP300', 'ESR1', 'FOS', 'FOXA1', 'FOXM1', 'GADD45A', 'GATA3', 'GLI1', 'GLI3', 'GSK3B', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC4', 'HIST1H2BA', 'HIST2H2BE', 'HNF1A', 'IFNAR1', 'JAK2', 'JUN', 'KAT2B', 'LEF1', 'LYN', 'MAML1', 'MYB', 'MYC', 'NOTCH1', 'PBRM1', 'PCNA', 'PRMT5', 'PSMA6', 'PSMC6', 'PSMD10', 'PSMD6', 'PSMD7', 'PSME3', 'PTK6', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RELA', 'RUNX1', 'RUNX3', 'SKP1', 'SKP2', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'SUV39H1', 'TCF7L2', 'TFDP1', 'TP53', 'WDR77', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.5990227653982987 Spearman Correlation: 0.5536515056965445 Coefficient of Determination: 0.35882827346542523 RMSE: 0.1911699644554815 NRMSE: 0.11492585423734326 MAPE: 521.0719930934429 Pearson Correlation: 0.22074098047915897 Spearman Correlation: 0.2705297044190811 Coefficient of Determination: -0.06175444924799245 RMSE: 0.24259014101989237 NRMSE: 0.1876819188431426 MAPE: 292.42002264297787 Predictor: ElasticNet Pearson Correlation: 0.5070963756229392 Spearman Correlation: 0.4796505845814525 Coefficient of Determination: 0.243004221493208 RMSE: 0.20772042696146434 NRMSE: 0.12487551367752242 MAPE: 551.844845425021 Pearson Correlation: 0.2956900319732793 Spearman Correlation: 0.33402594868793295 Coefficient of Determination: 0.0818056458523696 RMSE: 0.22559445005567313 NRMSE: 0.17453305846976014 MAPE: 345.90304542350736 Predictor: RandomForests Pearson Correlation: 0.5631499686100497 Spearman Correlation: 0.5390914785135056 Coefficient of Determination: 0.28914869597619186 RMSE: 0.20128984248854584 NRMSE: 0.12100963225676369 MAPE: 477.52792550531706 Pearson Correlation: 0.29471645301089366 Spearman Correlation: 0.452921529639248 Coefficient of Determination: 0.07768097138223085 RMSE: 0.2261005852832818 NRMSE: 0.17492463427870414 MAPE: 317.05892263039914 Protein: ERBB2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ADAM17', 'ADRB2', 'AREG', 'ARHGEF11', 'ARHGEF12', 'BTC', 'CBL', 'CCND1', 'CD44', 'CDC37', 'CDH1', 'CTNNB1', 'CTNND1', 'CUL5', 'DIAPH1', 'DOCK7', 'EGFR', 'EGF', 'ERBB2IP', 'ERBB3', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FYN', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IL6R', 'IL6', 'INS', 'JAK1', 'JAK2', 'KRAS', 'LRPPRC', 'MAP2K1', 'MAPK8', 'MATK', 'MEMO1', 'MUC1', 'MUC4', 'MYC', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'PGAP3', 'PGR', 'PIK3CA', 'PIK3CB', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PLXNB1', 'PRKACA', 'PTEN', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'RHOA', 'RHOB', 'RHOC', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'RPS27A', 'SEMA4D', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SRC', 'STAT1', 'STAT3', 'STUB1', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TGFA', 'TP53', 'UBA52', 'UBB', 'UBC', 'VEGFA', 'YES1', 'YY1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.846650264240519 Spearman Correlation: 0.7123243309405133 Coefficient of Determination: 0.716816669938541 RMSE: 0.5231078228887083 NRMSE: 0.0938764644560968 MAPE: 333.68104968781796 Pearson Correlation: 0.7341766613916402 Spearman Correlation: 0.5138327968003122 Coefficient of Determination: 0.5080034957095831 RMSE: 0.7415472351463451 NRMSE: 0.12633477607822294 MAPE: 753.4629034566642 Predictor: ElasticNet Pearson Correlation: 0.8348916464638888 Spearman Correlation: 0.710187745255428 Coefficient of Determination: 0.6940099856931269 RMSE: 0.5437646859547304 NRMSE: 0.09758352672231042 MAPE: 281.46649178794394 Pearson Correlation: 0.8046538686621861 Spearman Correlation: 0.5301482782167595 Coefficient of Determination: 0.629195120808995 RMSE: 0.6437696991282089 NRMSE: 0.10967676357023509 MAPE: 1109.3622538975633 Predictor: RandomForests Pearson Correlation: 0.8481728498544122 Spearman Correlation: 0.6807050673137784 Coefficient of Determination: 0.7163360509917931 RMSE: 0.5235515441797762 NRMSE: 0.09395609428418718 MAPE: 273.8506328801418 Pearson Correlation: 0.8072745956121323 Spearman Correlation: 0.5010446960552435 Coefficient of Determination: 0.6306863319364965 RMSE: 0.6424739183719914 NRMSE: 0.10945600599212761 MAPE: 1476.6991376048811 Protein: ERBB3 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AKT2', 'ANGPT1', 'ANGPT2', 'AREG', 'AR', 'BDNF', 'BMP4', 'BTC', 'CBLB', 'CBL', 'CCND1', 'CDH1', 'CSF1', 'CSK', 'CTNNB1', 'DCN', 'DOCK7', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FGF10', 'FGF19', 'FGF1', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FIGF', 'FLNA', 'FOXO3', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IGF1', 'IGF2', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'JAK1', 'JAK2', 'KITLG', 'KRAS', 'LAMA1', 'LAMB1', 'LAMC2', 'MAP2K1', 'MAPK8', 'MET', 'MUC4', 'NGF', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NTF3', 'PA2G4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PRKACA', 'PTEN', 'PTPN11', 'RNF41', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SOX10', 'SRC', 'TGFA', 'VEGFA', 'VEGFB', 'VEGFC', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.6050722222023428 Spearman Correlation: 0.596917256993673 Coefficient of Determination: 0.36611239408088114 RMSE: 0.3544018492651524 NRMSE: 0.09564288720868132 MAPE: 192.0282604035817 Pearson Correlation: 0.12515029460809807 Spearman Correlation: 0.26888108477221734 Coefficient of Determination: -0.6417148470802452 RMSE: 0.6634227317813393 NRMSE: 0.244842478670699 MAPE: 382.1694005042844 Predictor: ElasticNet Pearson Correlation: 0.5504058933210603 Spearman Correlation: 0.550513319410904 Coefficient of Determination: 0.2925821382303465 RMSE: 0.37439312038997336 NRMSE: 0.10103795750335945 MAPE: 185.67194024139303 Pearson Correlation: 0.41627197057498866 Spearman Correlation: 0.4447712418300654 Coefficient of Determination: 0.17160017390884053 RMSE: 0.4712609830991688 NRMSE: 0.1739233548614989 MAPE: 319.6217201264375 Predictor: RandomForests Pearson Correlation: 0.5452136536055863 Spearman Correlation: 0.579718471447528 Coefficient of Determination: 0.2810154614173048 RMSE: 0.37744147854677623 NRMSE: 0.10186062187705641 MAPE: 212.0710517498569 Pearson Correlation: 0.42385339480537054 Spearman Correlation: 0.3776168178714272 Coefficient of Determination: 0.1743540063903264 RMSE: 0.4704770294461702 NRMSE: 0.17363402929822233 MAPE: 362.7363007389323 Fold: 3 Protein: RB1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AATF', 'ABL1', 'AKT1', 'AR', 'ASF1A', 'ATF2', 'BGLAP', 'CASP3', 'CBX4', 'CCNA1', 'CCNA2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CEBPA', 'COL1A1', 'CREBBP', 'CTBP1', 'DNMT1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'ELF1', 'EP300', 'FOXM1', 'FZR1', 'GNB2L1', 'H1F0', 'H2AFV', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HIST1H2BA', 'HIST2H2AC', 'HIST2H2BE', 'HMGA1', 'HMGA2', 'HSP90AA1', 'ID2', 'JUN', 'MAPK14', 'MAPK1', 'MAPK3', 'MDM2', 'MEF2C', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NFYC', 'PCNA', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP2CA', 'PPP2CB', 'PRIM1', 'PRIM2', 'RAF1', 'RBBP4', 'RUNX2', 'SIRT1', 'SKP2', 'SMARCA2', 'SMC2', 'SMC4', 'SP100', 'SP1', 'SP3', 'SPI1', 'SUV39H1', 'TAF1', 'TBP', 'TERT', 'TFDP1', 'TP53BP1', 'TP53', 'TP73', 'YAP1', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.49382149931423097 Spearman Correlation: 0.49040936426452825 Coefficient of Determination: 0.24385967318495494 RMSE: 0.2092005337542211 NRMSE: 0.07650692428109315 MAPE: 392.1322732484804 Pearson Correlation: 0.08650921194493405 Spearman Correlation: 0.07943989326550208 Coefficient of Determination: -0.3003713830194481 RMSE: 0.25277316533742583 NRMSE: 0.1773672518752023 MAPE: 472.9599476174886 Predictor: ElasticNet Pearson Correlation: 0.3517144362937221 Spearman Correlation: 0.3683734328491743 Coefficient of Determination: 0.10387523786105413 RMSE: 0.2277434141588374 NRMSE: 0.08328825854258243 MAPE: 188.32826543139177 Pearson Correlation: 0.23071585985683934 Spearman Correlation: 0.2542999289267946 Coefficient of Determination: 0.03017570591542429 RMSE: 0.21829500313669428 NRMSE: 0.15317442716974772 MAPE: 259.446462157179 Predictor: RandomForests Pearson Correlation: 0.5955612306404852 Spearman Correlation: 0.4479699741717738 Coefficient of Determination: 0.1797618866936359 RMSE: 0.21788712107843547 NRMSE: 0.07968370431481696 MAPE: 166.45708572085704 Pearson Correlation: -0.014670344022122526 Spearman Correlation: 0.13396426389356478 Coefficient of Determination: -0.07349717755129115 RMSE: 0.2296665352119676 NRMSE: 0.16115366575351725 MAPE: 168.71434378733105 Protein: CDH1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ACTA1', 'ACTN1', 'ADAM10', 'ADAM15', 'CA2', 'CASP3', 'CBLL1', 'CDC42', 'CDH17', 'CDH3', 'CDH5', 'CTBP1', 'CTNNA1', 'CTNNB1', 'CTNND1', 'CTTN', 'DLG1', 'EFNA1', 'EGFR', 'EGF', 'ENAH', 'EPCAM', 'EPHA2', 'EXOC3', 'EXOC4', 'FER', 'FLOT1', 'FLOT2', 'FMN1', 'FYN', 'GDNF', 'GNA12', 'GNA13', 'HGF', 'HGS', 'IGF1R', 'IGF1', 'IGF2', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'ITGA6', 'ITGAE', 'ITGB4', 'ITGB7', 'AJUBA', 'JUP', 'KIFC3', 'KLK7', 'KLRG1', 'LAMB1', 'LAMC2', 'LIMA1', 'MAPK1', 'MAPK3', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MLLT4', 'MMP3', 'MMP7', 'MMP9', 'MYO6', 'NCSTN', 'NUMB', 'PARD6A', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PLEKHA7', 'PLG', 'PRKCI', 'PRKCZ', 'PSEN1', 'PVRL1', 'PVRL2', 'RAB5A', 'RAB7A', 'RAC1', 'RAP1A', 'RET', 'RHOA', 'SKIL', 'SMAD3', 'SMAD4', 'SNAI1', 'SNAI2', 'SNAI3', 'SRC', 'STX4', 'TJP1', 'TWIST1', 'VASP', 'VCL', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.7492023588877471 Spearman Correlation: 0.7240617785985481 Coefficient of Determination: 0.5613041745629648 RMSE: 0.7780577450662973 NRMSE: 0.12389059983221828 MAPE: 580.3292324427907 Pearson Correlation: 0.5685940444364853 Spearman Correlation: 0.4892604645943216 Coefficient of Determination: 0.17353289428786822 RMSE: 0.8559561258278019 NRMSE: 0.16827667318597922 MAPE: 346.51801034915974 Predictor: ElasticNet Pearson Correlation: 0.7293961845123575 Spearman Correlation: 0.7258252477162038 Coefficient of Determination: 0.5226453767900767 RMSE: 0.81161608567812 NRMSE: 0.12923411446739275 MAPE: 606.3783110278174 Pearson Correlation: 0.5615359900488637 Spearman Correlation: 0.5668973428596368 Coefficient of Determination: 0.2246809474489574 RMSE: 0.8290466068681415 NRMSE: 0.16298639697796985 MAPE: 314.1689187721124 Predictor: RandomForests Pearson Correlation: 0.7524338190668896 Spearman Correlation: 0.6942108204463948 Coefficient of Determination: 0.5617845261196615 RMSE: 0.7776316598487697 NRMSE: 0.12382275402833821 MAPE: 225.08244293518044 Pearson Correlation: 0.7280000432003245 Spearman Correlation: 0.49936096380413114 Coefficient of Determination: 0.5199522909693829 RMSE: 0.6523503784588328 NRMSE: 0.12824880636551583 MAPE: 155.4068923091974 Protein: CDH2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ADAM10', 'AFP', 'AHSG', 'ALB', 'APLP2', 'APOA1', 'APOB', 'APOE', 'APP', 'AXIN1', 'BDNF', 'BMP4', 'BNIP2', 'CALU', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH17', 'CDH18', 'CDH1', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDON', 'CREBBP', 'CSF1', 'CST3', 'CTNNA1', 'CTNNA2', 'CTNNB1', 'CTNND1', 'CYR61', 'FAM20C', 'FBN1', 'FER', 'FGFR1', 'FN1', 'FSTL1', 'GAS6', 'GJA1', 'GOLM1', 'GPC3', 'GRIA2', 'HSP90B1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL6', 'ITIH2', 'JUP', 'KIF5B', 'KNG1', 'KTN1', 'LAMB1', 'LAMC1', 'LGALS1', 'LRP5', 'LTBP1', 'MAP2K6', 'MAPK11', 'MAPK14', 'MATN3', 'MEF2A', 'MEF2C', 'MEF2D', 'MET', 'MFGE8', 'MSLN', 'NTRK2', 'P4HB', 'PCSK9', 'PIK3CA', 'PIK3R1', 'PTPN11', 'PTPN1', 'RAC1', 'RHOA', 'ROBO1', 'SCG2', 'SDC2', 'SERPINA1', 'SLIT1', 'SNAI1', 'SNAI2', 'SPAG9', 'SPARCL1', 'SPP1', 'STC2', 'TCF3', 'TIMP1', 'TMEM132A', 'TNC', 'VCAN', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.49061849430779675 Spearman Correlation: 0.4691996667255932 Coefficient of Determination: 0.24070650695684948 RMSE: 0.3322010369156763 NRMSE: 0.12037141710112194 MAPE: 984.2038457698676 Pearson Correlation: 0.05426098865248949 Spearman Correlation: 0.04491577201710745 Coefficient of Determination: -0.4220735248256302 RMSE: 0.39588669234774043 NRMSE: 0.20859416419781043 MAPE: 3416.930625450133 Predictor: ElasticNet Pearson Correlation: 0.441367546576261 Spearman Correlation: 0.41566268727612776 Coefficient of Determination: 0.17635834727394173 RMSE: 0.345991393062711 NRMSE: 0.1253682850433767 MAPE: 278.2951029838874 Pearson Correlation: 0.06509385206721552 Spearman Correlation: 0.0633997930148755 Coefficient of Determination: -0.07999749292172731 RMSE: 0.3450017129617374 NRMSE: 0.18178268012821538 MAPE: 1044.7268719221556 Predictor: RandomForests Pearson Correlation: 0.49290821448702327 Spearman Correlation: 0.45845591613102726 Coefficient of Determination: 0.17951866306918507 RMSE: 0.34532697003162727 NRMSE: 0.1251275346154168 MAPE: 581.6340437811261 Pearson Correlation: 0.0760139287005622 Spearman Correlation: 0.05782622953685905 Coefficient of Determination: -0.0126891420491837 RMSE: 0.33407805958420606 NRMSE: 0.17602696671244025 MAPE: 1587.1027603435464 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.5727097811799441 Spearman Correlation: 0.5792644266997269 Coefficient of Determination: 0.32799649345917925 RMSE: 0.1742073915858315 NRMSE: 0.12221992450035887 MAPE: 860.7578539003557 Pearson Correlation: 0.3078638378825443 Spearman Correlation: 0.3008441501764361 Coefficient of Determination: -0.03313055115945196 RMSE: 0.1914225605909612 NRMSE: 0.16650217940014195 MAPE: 244.5250349075852 Predictor: ElasticNet Pearson Correlation: 0.5103593066391751 Spearman Correlation: 0.531313386471416 Coefficient of Determination: 0.2406953114285656 RMSE: 0.18517776976972827 NRMSE: 0.12991649111082693 MAPE: 637.9292923620376 Pearson Correlation: 0.32624549225714594 Spearman Correlation: 0.3443409518821931 Coefficient of Determination: 0.09881825970951352 RMSE: 0.17878114354723315 NRMSE: 0.1555064875548924 MAPE: 169.64645122676743 Predictor: RandomForests Pearson Correlation: 0.5653902264193225 Spearman Correlation: 0.5647909017496053 Coefficient of Determination: 0.2839064224243535 RMSE: 0.17983147143600559 NRMSE: 0.1261656503872745 MAPE: 669.4133299085007 Pearson Correlation: 0.36166175579365273 Spearman Correlation: 0.3745059165326251 Coefficient of Determination: 0.12762128326974997 RMSE: 0.17590089529614486 NRMSE: 0.15300120495111194 MAPE: 201.7567420267845 Protein: PTEN Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AR', 'BCR', 'CD79A', 'CD79B', 'CDIPT', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'DLG1', 'EGFR', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'FOXO3', 'FOXO4', 'FRK', 'GRB2', 'HRAS', 'INPP4A', 'INPP4B', 'INPP5B', 'INPP5D', 'INPP5J', 'INPP5K', 'INPPL1', 'IPMK', 'IRS1', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'MAST2', 'MDM2', 'MDM4', 'MKRN1', 'MTOR', 'MYC', 'NEDD4', 'NOTCH1', 'OCRL', 'OTUD3', 'PARK7', 'PDGFB', 'PDGFRB', 'PI4K2A', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIKFYVE', 'PIP4K2A', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PML', 'PREX2', 'PSMA6', 'PSMA7', 'PSMB9', 'PSMC6', 'PSMD10', 'PSMD5', 'PSME3', 'PTK2', 'RICTOR', 'RNF146', 'ROCK1', 'ROCK2', 'RPS27A', 'RPS6KB1', 'SACM1L', 'SHC1', 'SLC9A3R1', 'SLC9A3R2', 'SOS1', 'STK11', 'STUB1', 'SYNJ1', 'SYNJ2', 'TNKS2', 'TNKS', 'TNRC6A', 'TNRC6B', 'TP53', 'UBB', 'UBC', 'USP13', 'USP7', 'WWP2', 'XIAP', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 0.5819721868908743 Spearman Correlation: 0.5839848121569017 Coefficient of Determination: 0.3386916263145464 RMSE: 0.5117476085593039 NRMSE: 0.080016825667939 MAPE: 720.6581121388663 Pearson Correlation: 0.25608005097821185 Spearman Correlation: 0.2685045948203843 Coefficient of Determination: -0.16422604302924793 RMSE: 0.5081608630867843 NRMSE: 0.12149401403117303 MAPE: 158.01780187148927 Predictor: ElasticNet Pearson Correlation: 0.54441391579749 Spearman Correlation: 0.5587583571455734 Coefficient of Determination: 0.2846146828351832 RMSE: 0.5322599906886616 NRMSE: 0.08322414051890573 MAPE: 470.98085824773506 Pearson Correlation: 0.35039886885934224 Spearman Correlation: 0.32097407698350355 Coefficient of Determination: 0.09940689810868042 RMSE: 0.4469375738398596 NRMSE: 0.1068563988523549 MAPE: 123.85770887475478 Predictor: RandomForests Pearson Correlation: 0.5708312473716917 Spearman Correlation: 0.5006071900730924 Coefficient of Determination: 0.2861624064467695 RMSE: 0.5316839113489705 NRMSE: 0.08313406478758041 MAPE: 321.1635150456908 Pearson Correlation: 0.39228370703543847 Spearman Correlation: 0.42074445004295485 Coefficient of Determination: 0.14843218116755785 RMSE: 0.4346024592474943 NRMSE: 0.10390724889960654 MAPE: 111.93748242375841 Protein: BRCA2 Protein Interaction Partners Count: 100 x_train_column_count: 99 x_train columns: ['ATM', 'ATRIP', 'ATR', 'BARD1', 'BLM', 'BRCA1', 'BRIP1', 'SLX4', 'RHNO1', 'RMI2', 'CDK2', 'CDK4', 'CHEK1', 'CHEK2', 'DMC1', 'DNA2', 'EME1', 'EME2', 'EXO1', 'FANCD2', 'FANCE', 'FANCG', 'FANCI', 'GEN1', 'H2AFX', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HUS1', 'KAT5', 'SPIDR', 'MLH1', 'MLH3', 'MND1', 'MRE11A', 'MSH4', 'MSH5', 'MUS81', 'NBN', 'PALB2', 'PARP1', 'PCNA', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'PSMC3IP', 'RAD17', 'RAD1', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD9A', 'RAD9B', 'RBBP8', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SPO11', 'SYCP3', 'TEX15', 'TOP3A', 'TOPBP1', 'TP53', 'UBA52', 'UBB', 'UBC', 'WRN', 'XRCC2', 'XRCC3', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.518921842752086 Spearman Correlation: 0.48245839810971913 Coefficient of Determination: 0.2692798788852204 RMSE: 0.1624589893637828 NRMSE: 0.10949437182472624 MAPE: 256.1590297870604 Pearson Correlation: 0.17052929129434005 Spearman Correlation: 0.17092233070237783 Coefficient of Determination: -0.03488279988620224 RMSE: 0.2178341573346815 NRMSE: 0.14982849963524167 MAPE: 292.39613815599796 Predictor: ElasticNet Pearson Correlation: 0.4131635287686156 Spearman Correlation: 0.39499613692054414 Coefficient of Determination: 0.14911945901750046 RMSE: 0.17530831277870915 NRMSE: 0.11815457955591968 MAPE: 182.87920444576957 Pearson Correlation: 0.14459383005828852 Spearman Correlation: 0.15703188319056346 Coefficient of Determination: 0.018705168796370186 RMSE: 0.21211928336551572 NRMSE: 0.1458977524885072 MAPE: 183.8681551149304 Predictor: RandomForests Pearson Correlation: 0.5221573333297352 Spearman Correlation: 0.46690069650256844 Coefficient of Determination: 0.19795589074461306 RMSE: 0.17020305099067898 NRMSE: 0.1147137269772457 MAPE: 197.09949288630483 Pearson Correlation: 0.05011125301404238 Spearman Correlation: 0.09698125911794413 Coefficient of Determination: -0.013596067374654464 RMSE: 0.21558217738816055 NRMSE: 0.14827956543353388 MAPE: 161.87918769290792 Protein: CDKN2A Protein Interaction Partners Count: 100 x_train_column_count: 100 x_train columns: ['ABL1', 'AKT1', 'ARF1', 'BMI1', 'BRCA1', 'CBX7', 'CCND1', 'CCND2', 'CCND3', 'CCNL1', 'CDC45', 'CDC6', 'CDC7', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPB', 'CTCF', 'DAXX', 'E2F1', 'E2F2', 'E2F3', 'EGFR', 'EGR1', 'AGO1', 'AGO3', 'AGO4', 'ERBB2', 'EZH2', 'FOXM1', 'GMNN', 'HDAC1', 'HIF1A', 'HRAS', 'HUWE1', 'IL6', 'KRAS', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAX', 'MCM10', 'MCM2', 'MCM5', 'MDM2', 'MDM4', 'MGMT', 'MLH1', 'MOV10', 'MRAS', 'MTAP', 'MYCN', 'MYC', 'NPM1', 'NRAS', 'ORC5', 'PIK3CA', 'PIK3R1', 'PTEN', 'RASSF1', 'RB1', 'RPS27A', 'RRAS2', 'RRAS', 'RUNX3', 'SMAD3', 'SMAD4', 'SMARCA4', 'SUMO1', 'SUMO2', 'SUMO3', 'TBX2', 'TERT', 'TFDP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TP53', 'TP63', 'TRIP12', 'TWIST1', 'UBA52', 'UBB', 'UBC', 'UBE2I', 'USP7', 'VEGFA', 'WRN', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.7248469273167809 Spearman Correlation: 0.6522991400525601 Coefficient of Determination: 0.5254030680405786 RMSE: 0.45990806592881 NRMSE: 0.10737487531023768 MAPE: 300.6956432948472 Pearson Correlation: 0.5319889491853288 Spearman Correlation: 0.4771555755059291 Coefficient of Determination: 0.24184431513274762 RMSE: 0.5716644576791955 NRMSE: 0.17648867206297905 MAPE: 188.18598511498772 Predictor: ElasticNet Pearson Correlation: 0.7006628979600047 Spearman Correlation: 0.6237652551611903 Coefficient of Determination: 0.4832732540249892 RMSE: 0.4798870537803164 NRMSE: 0.11203937564912131 MAPE: 247.254004266079 Pearson Correlation: 0.5714875119438049 Spearman Correlation: 0.5051758750109104 Coefficient of Determination: 0.3206211498132593 RMSE: 0.5411504263393264 NRMSE: 0.16706814434235634 MAPE: 134.26258622088102 Predictor: RandomForests Pearson Correlation: 0.6713717701733481 Spearman Correlation: 0.6171187898147904 Coefficient of Determination: 0.4408312732603339 RMSE: 0.4992062341498074 NRMSE: 0.11654983053553591 MAPE: 202.2924022228656 Pearson Correlation: 0.6270859191911262 Spearman Correlation: 0.5914544962591366 Coefficient of Determination: 0.38440543231941837 RMSE: 0.515121151574826 NRMSE: 0.15903218535235897 MAPE: 102.26032325599306 Protein: TP53 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AKT1', 'APAF1', 'ATM', 'ATR', 'AURKA', 'AURKB', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2L1', 'BCL2', 'BCL6', 'BRCA1', 'CASP8', 'CCNA2', 'CCNE1', 'CCNG1', 'CDC25C', 'CDK2', 'CDK5', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CHEK1', 'CHEK2', 'COPS5', 'CREBBP', 'DDB2', 'DDX5', 'DYRK2', 'E2F4', 'EGR1', 'EHMT2', 'EP300', 'EZH2', 'FZR1', 'GADD45A', 'GLS2', 'GSK3B', 'HDAC1', 'HDAC2', 'HIF1A', 'HIPK2', 'HSP90AA1', 'HSPA1A', 'IGFBP3', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'MAPK14', 'MAPK1', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MCL1', 'MDM2', 'MDM4', 'MSH2', 'NGFR', 'NPM1', 'PLK3', 'PMAIP1', 'PPP1R13B', 'PPP1R13L', 'PRKDC', 'PRMT5', 'PTEN', 'RB1', 'RCHY1', 'DROSHA', 'RPA1', 'RRM2B', 'SETD7', 'SETD8', 'SFN', 'SIRT1', 'SMYD2', 'SNAI1', 'SNAI2', 'SP1', 'STAT3', 'STK11', 'SUMO1', 'SUMO2', 'TBP', 'TNFRSF10A', 'TNFRSF10B', 'TP53BP1', 'TP53BP2', 'TP53INP1', 'TP53RK', 'TXN', 'UBE2I', 'USP7', 'WRN', 'XRCC6', 'YY1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.6604922878327505 Spearman Correlation: 0.6037254325437036 Coefficient of Determination: 0.43625006228654095 RMSE: 0.3379594715989826 NRMSE: 0.0812207333811542 MAPE: 850.7211660221095 Pearson Correlation: 0.49671408929255323 Spearman Correlation: 0.4697489993640818 Coefficient of Determination: 0.17890926229192516 RMSE: 0.39004670300651 NRMSE: 0.14544809541986956 MAPE: 630.8668286306257 Predictor: ElasticNet Pearson Correlation: 0.6014332341249514 Spearman Correlation: 0.5349817320581909 Coefficient of Determination: 0.3498787016637581 RMSE: 0.36292640431241424 NRMSE: 0.08722095753723005 MAPE: 634.7371003293592 Pearson Correlation: 0.5039650102933881 Spearman Correlation: 0.4494794199428921 Coefficient of Determination: 0.24372245423589356 RMSE: 0.3743360365710906 NRMSE: 0.1395896008006483 MAPE: 466.28787804685305 Predictor: RandomForests Pearson Correlation: 0.6391457427867844 Spearman Correlation: 0.5738541184231455 Coefficient of Determination: 0.35795781438014296 RMSE: 0.36066429582771786 NRMSE: 0.086677312143167 MAPE: 586.8426148813124 Pearson Correlation: 0.4804190782263101 Spearman Correlation: 0.3898437383115112 Coefficient of Determination: 0.21338759158484022 RMSE: 0.38176967754786406 NRMSE: 0.14236159941971818 MAPE: 385.7156469900238 Protein: CTNNB1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'AKT1', 'APC2', 'APC', 'AR', 'AXIN1', 'AXIN2', 'BCL9', 'BTRC', 'CASP3', 'CBY1', 'CCND1', 'CDC73', 'CDH11', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDH5', 'CDH8', 'CHD8', 'CREBBP', 'CSNK1A1', 'CSNK1E', 'CTBP1', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNBIP1', 'CTNND1', 'DVL1', 'DVL2', 'DVL3', 'EGFR', 'EGF', 'EP300', 'ERBB2', 'AMER1', 'FBXW11', 'FER', 'FGFR1', 'FOXO1', 'FOXO3', 'FYN', 'FZD1', 'FZD2', 'FZD5', 'GSK3A', 'GSK3B', 'HNF4A', 'IGF1R', 'IQGAP1', 'JUN', 'JUP', 'KDR', 'KLF4', 'LEF1', 'LRP5', 'LRP6', 'MAPK9', 'MEN1', 'MET', 'MMP7', 'MYC', 'NLK', 'NOTCH1', 'PIK3CA', 'PIK3R1', 'PITX2', 'PSEN1', 'PTPN11', 'PTPN1', 'PYGO2', 'RUVBL1', 'SKP1', 'SMAD4', 'SMAD7', 'SMARCA4', 'SOX17', 'SOX2', 'SOX6', 'SOX9', 'SRC', 'TBL1X', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TGFBR1', 'TGFBR2', 'TJP1', 'TLE1', 'VCL', 'VEGFA', 'WNT1', 'WNT3A', 'WNT8A', 'WNT8B', 'YWHAZ', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.678216946324291 Spearman Correlation: 0.6536543128781496 Coefficient of Determination: 0.4599782262814466 RMSE: 0.56525376770937 NRMSE: 0.11118288113874311 MAPE: 365.24048637211973 Pearson Correlation: 0.42260831812169736 Spearman Correlation: 0.3748051721343159 Coefficient of Determination: -0.04605870049890459 RMSE: 0.6269277748449364 NRMSE: 0.20495203336001058 MAPE: 1174.0121470981167 Predictor: ElasticNet Pearson Correlation: 0.6605710530065191 Spearman Correlation: 0.6374630549198438 Coefficient of Determination: 0.42510268057985134 RMSE: 0.5832207568922799 NRMSE: 0.11471690733522423 MAPE: 277.23208760095156 Pearson Correlation: 0.4325603467771967 Spearman Correlation: 0.3952592925098817 Coefficient of Determination: 0.10593565479891554 RMSE: 0.5795939863450824 NRMSE: 0.18947791243423528 MAPE: 1836.32649102217 Predictor: RandomForests Pearson Correlation: 0.6661312165524925 Spearman Correlation: 0.6347797745153959 Coefficient of Determination: 0.43853256518190087 RMSE: 0.5763683393428425 NRMSE: 0.11336906753399735 MAPE: 242.10542978288473 Pearson Correlation: 0.43189919620587325 Spearman Correlation: 0.27905120893201024 Coefficient of Determination: 0.16249536723411284 RMSE: 0.5609615467177448 NRMSE: 0.18338669022123794 MAPE: 1007.4727106586553 Protein: CCNE1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['ABL1', 'BARD1', 'BRCA1', 'CABLES1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNH', 'CCT2', 'CCT3', 'CCT4', 'CCT6A', 'CCT7', 'CDC25A', 'CDC6', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDT1', 'CKS1B', 'CKS2', 'CUL1', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'EP400', 'FOXM1', 'HDAC1', 'IFNAR1', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'MNAT1', 'MYC', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PCNA', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB7', 'PSMC1', 'PSMC2', 'PSMC4', 'PSMC5', 'PSMD10', 'PSMD11', 'PSMD14', 'PSMD1', 'PSMD3', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSME3', 'PTK6', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RHOA', 'RPS27A', 'RRN3', 'SKP1', 'SKP2', 'STAT5A', 'STAT5B', 'TCP1', 'TFDP1', 'TP53', 'TP73', 'UBB', 'UBC', 'WEE1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.8896622937332074 Spearman Correlation: 0.7214768507010174 Coefficient of Determination: 0.7914989968906314 RMSE: 0.23854831159762596 NRMSE: 0.05756891464093104 MAPE: 47.07317346782926 Pearson Correlation: 0.7341609096695707 Spearman Correlation: 0.49959974563273857 Coefficient of Determination: 0.4357314292236446 RMSE: 0.27409635758558265 NRMSE: 0.11939554714709354 MAPE: 101.90055834655185 Predictor: ElasticNet Pearson Correlation: 0.8669670287825667 Spearman Correlation: 0.7005797335480877 Coefficient of Determination: 0.746445913893999 RMSE: 0.26306167407188547 NRMSE: 0.06348472960684544 MAPE: 55.77322671690599 Pearson Correlation: 0.7391477211804651 Spearman Correlation: 0.5375353807404082 Coefficient of Determination: 0.5221353769444224 RMSE: 0.2522393124247501 NRMSE: 0.10987468415940677 MAPE: 69.43378753117081 Predictor: RandomForests Pearson Correlation: 0.8627114244015965 Spearman Correlation: 0.7269204277536142 Coefficient of Determination: 0.7416334567459337 RMSE: 0.26554639508307426 NRMSE: 0.06408436785555766 MAPE: 55.98907083758849 Pearson Correlation: 0.770885107897393 Spearman Correlation: 0.6684149573709636 Coefficient of Determination: 0.5291341557642604 RMSE: 0.25038535765203646 NRMSE: 0.1090671070488463 MAPE: 79.58878990181303 Protein: CCND1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ACTL6A', 'AKT1', 'ARID1A', 'ARID2', 'AR', 'ATF2', 'BRD2', 'BTG2', 'CCNA1', 'CCNB1', 'CCNE1', 'CCNH', 'CDC25A', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CKS1B', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUL1', 'DNMT3A', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'AGO2', 'EP300', 'ESR1', 'FOS', 'FOXA1', 'FOXM1', 'GADD45A', 'GATA3', 'GLI1', 'GLI3', 'GSK3B', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC4', 'HIST1H2BA', 'HIST2H2BE', 'HNF1A', 'IFNAR1', 'JAK2', 'JUN', 'KAT2B', 'LEF1', 'LYN', 'MAML1', 'MYB', 'MYC', 'NOTCH1', 'PBRM1', 'PCNA', 'PRMT5', 'PSMA6', 'PSMC6', 'PSMD10', 'PSMD6', 'PSMD7', 'PSME3', 'PTK6', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RELA', 'RUNX1', 'RUNX3', 'SKP1', 'SKP2', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'SUV39H1', 'TCF7L2', 'TFDP1', 'TP53', 'WDR77', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.5837974359856966 Spearman Correlation: 0.5579925334219846 Coefficient of Determination: 0.3408194462634734 RMSE: 0.19863634190917473 NRMSE: 0.11941442444432239 MAPE: 483.7154896298898 Pearson Correlation: 0.1508358763897699 Spearman Correlation: 0.11990922580082046 Coefficient of Determination: -0.14554458092158362 RMSE: 0.22448452790066611 NRMSE: 0.21271500658624895 MAPE: 377.5972700804398 Predictor: ElasticNet Pearson Correlation: 0.4879559808669711 Spearman Correlation: 0.47380684028985276 Coefficient of Determination: 0.22635233599326154 RMSE: 0.21519299225987668 NRMSE: 0.12936780383780205 MAPE: 546.0120581442955 Pearson Correlation: 0.3218329459126174 Spearman Correlation: 0.24355665282609512 Coefficient of Determination: 0.09786193068214721 RMSE: 0.1992126538190685 NRMSE: 0.1887681140677025 MAPE: 365.92730992969365 Predictor: RandomForests Pearson Correlation: 0.5574382931774727 Spearman Correlation: 0.5115894031152839 Coefficient of Determination: 0.27287753896835265 RMSE: 0.20862209166280588 NRMSE: 0.12541756842096757 MAPE: 484.02077540170245 Pearson Correlation: 0.38420245784361057 Spearman Correlation: 0.3416734414989403 Coefficient of Determination: 0.13797720234983835 RMSE: 0.194733106394091 NRMSE: 0.1845234252736973 MAPE: 286.8581137015489 Protein: ERBB2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ADAM17', 'ADRB2', 'AREG', 'ARHGEF11', 'ARHGEF12', 'BTC', 'CBL', 'CCND1', 'CD44', 'CDC37', 'CDH1', 'CTNNB1', 'CTNND1', 'CUL5', 'DIAPH1', 'DOCK7', 'EGFR', 'EGF', 'ERBB2IP', 'ERBB3', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FYN', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IL6R', 'IL6', 'INS', 'JAK1', 'JAK2', 'KRAS', 'LRPPRC', 'MAP2K1', 'MAPK8', 'MATK', 'MEMO1', 'MUC1', 'MUC4', 'MYC', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'PGAP3', 'PGR', 'PIK3CA', 'PIK3CB', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PLXNB1', 'PRKACA', 'PTEN', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'RHOA', 'RHOB', 'RHOC', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'RPS27A', 'SEMA4D', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SRC', 'STAT1', 'STAT3', 'STUB1', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TGFA', 'TP53', 'UBA52', 'UBB', 'UBC', 'VEGFA', 'YES1', 'YY1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 0.8532021254618395 Spearman Correlation: 0.7207290624252993 Coefficient of Determination: 0.7279538668926004 RMSE: 0.5117929717195496 NRMSE: 0.08719235594997182 MAPE: 537.2718365645653 Pearson Correlation: 0.7806645939488788 Spearman Correlation: 0.5663918083668892 Coefficient of Determination: 0.5880639226090224 RMSE: 0.6845300655682582 NRMSE: 0.12348114322250131 MAPE: 271.3092144266995 Predictor: ElasticNet Pearson Correlation: 0.8376290765496645 Spearman Correlation: 0.70568644062964 Coefficient of Determination: 0.6977603861614332 RMSE: 0.5394469374107171 NRMSE: 0.09190366414139005 MAPE: 593.3409562363217 Pearson Correlation: 0.824938239124741 Spearman Correlation: 0.6260559683491798 Coefficient of Determination: 0.6779327422489069 RMSE: 0.6052724419004091 NRMSE: 0.10918400351764361 MAPE: 203.3752913728555 Predictor: RandomForests Pearson Correlation: 0.8323152680716361 Spearman Correlation: 0.6466808582088528 Coefficient of Determination: 0.687121723576946 RMSE: 0.5488589421578967 NRMSE: 0.0935071540552152 MAPE: 530.1809820817119 Pearson Correlation: 0.8689888493238265 Spearman Correlation: 0.707782313058422 Coefficient of Determination: 0.7501293991063542 RMSE: 0.5331325437528497 NRMSE: 0.09617081747471855 MAPE: 199.28302683331736 Protein: ERBB3 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AKT2', 'ANGPT1', 'ANGPT2', 'AREG', 'AR', 'BDNF', 'BMP4', 'BTC', 'CBLB', 'CBL', 'CCND1', 'CDH1', 'CSF1', 'CSK', 'CTNNB1', 'DCN', 'DOCK7', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FGF10', 'FGF19', 'FGF1', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FIGF', 'FLNA', 'FOXO3', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IGF1', 'IGF2', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'JAK1', 'JAK2', 'KITLG', 'KRAS', 'LAMA1', 'LAMB1', 'LAMC2', 'MAP2K1', 'MAPK8', 'MET', 'MUC4', 'NGF', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NTF3', 'PA2G4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PRKACA', 'PTEN', 'PTPN11', 'RNF41', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SOX10', 'SRC', 'TGFA', 'VEGFA', 'VEGFB', 'VEGFC', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.6178646400878779 Spearman Correlation: 0.6168648283503396 Coefficient of Determination: 0.38175671347092277 RMSE: 0.35461775078286684 NRMSE: 0.1285839255595321 MAPE: 204.31054957740713 Pearson Correlation: 0.19404237142989172 Spearman Correlation: 0.26638985523510267 Coefficient of Determination: -0.23446970188389993 RMSE: 0.5496689746744833 NRMSE: 0.15282379222200132 MAPE: 217.11290064204198 Predictor: ElasticNet Pearson Correlation: 0.5719273947093861 Spearman Correlation: 0.5701831352564208 Coefficient of Determination: 0.3168339310195035 RMSE: 0.3727725378153202 NRMSE: 0.13516682723091378 MAPE: 206.425705874886 Pearson Correlation: 0.32066777277296654 Spearman Correlation: 0.34993703163381096 Coefficient of Determination: 0.07174163667838629 RMSE: 0.47664543963974937 NRMSE: 0.13252114815868474 MAPE: 160.53112315985294 Predictor: RandomForests Pearson Correlation: 0.5564295279937248 Spearman Correlation: 0.5963535880548776 Coefficient of Determination: 0.29654198166972134 RMSE: 0.37826822234510654 NRMSE: 0.13715955514404468 MAPE: 233.76510051435812 Pearson Correlation: 0.37862951438118275 Spearman Correlation: 0.3657286642704281 Coefficient of Determination: 0.11713651262517022 RMSE: 0.4648445942592307 NRMSE: 0.1292401735620298 MAPE: 159.01422162833032 Fold: 4 Protein: RB1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AATF', 'ABL1', 'AKT1', 'AR', 'ASF1A', 'ATF2', 'BGLAP', 'CASP3', 'CBX4', 'CCNA1', 'CCNA2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CEBPA', 'COL1A1', 'CREBBP', 'CTBP1', 'DNMT1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'ELF1', 'EP300', 'FOXM1', 'FZR1', 'GNB2L1', 'H1F0', 'H2AFV', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HIST1H2BA', 'HIST2H2AC', 'HIST2H2BE', 'HMGA1', 'HMGA2', 'HSP90AA1', 'ID2', 'JUN', 'MAPK14', 'MAPK1', 'MAPK3', 'MDM2', 'MEF2C', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NFYC', 'PCNA', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP2CA', 'PPP2CB', 'PRIM1', 'PRIM2', 'RAF1', 'RBBP4', 'RUNX2', 'SIRT1', 'SKP2', 'SMARCA2', 'SMC2', 'SMC4', 'SP100', 'SP1', 'SP3', 'SPI1', 'SUV39H1', 'TAF1', 'TBP', 'TERT', 'TFDP1', 'TP53BP1', 'TP53', 'TP73', 'YAP1', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.4875747745701666 Spearman Correlation: 0.4555438598018932 Coefficient of Determination: 0.2377291607971488 RMSE: 0.21958939291793453 NRMSE: 0.08030624375290174 MAPE: 345.9987622234785 Pearson Correlation: 0.12296914457550182 Spearman Correlation: 0.16345590344019253 Coefficient of Determination: -0.5830427283840969 RMSE: 0.20745336561686373 NRMSE: 0.19876342852188683 MAPE: 365.30431589863207 Predictor: ElasticNet Pearson Correlation: 0.37217326513424026 Spearman Correlation: 0.3637769618449443 Coefficient of Determination: 0.1184369752014588 RMSE: 0.2361475195562764 NRMSE: 0.08636173184474707 MAPE: 228.36441231157195 Pearson Correlation: 0.16640819358008152 Spearman Correlation: 0.21199516203443933 Coefficient of Determination: -0.08376409374829819 RMSE: 0.1716491058827611 NRMSE: 0.1644589601452124 MAPE: 131.43017715181995 Predictor: RandomForests Pearson Correlation: 0.5295541412776307 Spearman Correlation: 0.3951745569721164 Coefficient of Determination: 0.16828902434987514 RMSE: 0.22937333090508497 NRMSE: 0.08388433693135056 MAPE: 170.33048573313587 Pearson Correlation: 0.10988100774688508 Spearman Correlation: 0.22686816543847185 Coefficient of Determination: -0.09267721288551667 RMSE: 0.17235350095759733 NRMSE: 0.16513384907599485 MAPE: 105.74982355234191 Protein: CDH1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ACTA1', 'ACTN1', 'ADAM10', 'ADAM15', 'CA2', 'CASP3', 'CBLL1', 'CDC42', 'CDH17', 'CDH3', 'CDH5', 'CTBP1', 'CTNNA1', 'CTNNB1', 'CTNND1', 'CTTN', 'DLG1', 'EFNA1', 'EGFR', 'EGF', 'ENAH', 'EPCAM', 'EPHA2', 'EXOC3', 'EXOC4', 'FER', 'FLOT1', 'FLOT2', 'FMN1', 'FYN', 'GDNF', 'GNA12', 'GNA13', 'HGF', 'HGS', 'IGF1R', 'IGF1', 'IGF2', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'ITGA6', 'ITGAE', 'ITGB4', 'ITGB7', 'AJUBA', 'JUP', 'KIFC3', 'KLK7', 'KLRG1', 'LAMB1', 'LAMC2', 'LIMA1', 'MAPK1', 'MAPK3', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MLLT4', 'MMP3', 'MMP7', 'MMP9', 'MYO6', 'NCSTN', 'NUMB', 'PARD6A', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PLEKHA7', 'PLG', 'PRKCI', 'PRKCZ', 'PSEN1', 'PVRL1', 'PVRL2', 'RAB5A', 'RAB7A', 'RAC1', 'RAP1A', 'RET', 'RHOA', 'SKIL', 'SMAD3', 'SMAD4', 'SNAI1', 'SNAI2', 'SNAI3', 'SRC', 'STX4', 'TJP1', 'TWIST1', 'VASP', 'VCL', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 0.7438080568294363 Spearman Correlation: 0.7079022704896073 Coefficient of Determination: 0.5532504254043817 RMSE: 0.7479396338686939 NRMSE: 0.11909487498307281 MAPE: 503.45723472534047 Pearson Correlation: 0.3693417982501306 Spearman Correlation: 0.41259616703450164 Coefficient of Determination: -0.39858373465584673 RMSE: 1.3794605745587731 NRMSE: 0.2502559004678301 MAPE: 468.26453366082023 Predictor: ElasticNet Pearson Correlation: 0.7181720808437488 Spearman Correlation: 0.7088662293775968 Coefficient of Determination: 0.5042401875580469 RMSE: 0.7878982448265585 NRMSE: 0.12545750849121975 MAPE: 560.6860832896252 Pearson Correlation: 0.5770015896255763 Spearman Correlation: 0.49654733849549243 Coefficient of Determination: 0.3275199471362099 RMSE: 0.9565435763130337 NRMSE: 0.1735320881522865 MAPE: 381.7609231857668 Predictor: RandomForests Pearson Correlation: 0.744403162376981 Spearman Correlation: 0.7048831848126462 Coefficient of Determination: 0.5496207955569148 RMSE: 0.7509718161643397 NRMSE: 0.1195776911825005 MAPE: 236.42227241163098 Pearson Correlation: 0.7645869616479644 Spearman Correlation: 0.46733260436301827 Coefficient of Determination: 0.5170582344841836 RMSE: 0.8106108992805026 NRMSE: 0.14705759937602092 MAPE: 192.8409827623321 Protein: CDH2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ADAM10', 'AFP', 'AHSG', 'ALB', 'APLP2', 'APOA1', 'APOB', 'APOE', 'APP', 'AXIN1', 'BDNF', 'BMP4', 'BNIP2', 'CALU', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH17', 'CDH18', 'CDH1', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDON', 'CREBBP', 'CSF1', 'CST3', 'CTNNA1', 'CTNNA2', 'CTNNB1', 'CTNND1', 'CYR61', 'FAM20C', 'FBN1', 'FER', 'FGFR1', 'FN1', 'FSTL1', 'GAS6', 'GJA1', 'GOLM1', 'GPC3', 'GRIA2', 'HSP90B1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL6', 'ITIH2', 'JUP', 'KIF5B', 'KNG1', 'KTN1', 'LAMB1', 'LAMC1', 'LGALS1', 'LRP5', 'LTBP1', 'MAP2K6', 'MAPK11', 'MAPK14', 'MATN3', 'MEF2A', 'MEF2C', 'MEF2D', 'MET', 'MFGE8', 'MSLN', 'NTRK2', 'P4HB', 'PCSK9', 'PIK3CA', 'PIK3R1', 'PTPN11', 'PTPN1', 'RAC1', 'RHOA', 'ROBO1', 'SCG2', 'SDC2', 'SERPINA1', 'SLIT1', 'SNAI1', 'SNAI2', 'SPAG9', 'SPARCL1', 'SPP1', 'STC2', 'TCF3', 'TIMP1', 'TMEM132A', 'TNC', 'VCAN', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.4907868590412373 Spearman Correlation: 0.470001824232073 Coefficient of Determination: 0.24087174100756326 RMSE: 0.33053173480115666 NRMSE: 0.11976655366372806 MAPE: 1569.6862332879368 Pearson Correlation: 0.10863191180945136 Spearman Correlation: 0.07453708899113456 Coefficient of Determination: -0.4058581823584775 RMSE: 0.3951510226904187 NRMSE: 0.20384580841196126 MAPE: 390.906963156833 Predictor: ElasticNet Pearson Correlation: 0.4125841801922376 Spearman Correlation: 0.4055517379206004 Coefficient of Determination: 0.15041580193842885 RMSE: 0.3496703407755409 NRMSE: 0.12670133371097214 MAPE: 675.9706314503921 Pearson Correlation: 0.31868073025734267 Spearman Correlation: 0.31728824548934526 Coefficient of Determination: 0.07049444766987112 RMSE: 0.32130563928491923 NRMSE: 0.16575133057081795 MAPE: 164.4833795747278 Predictor: RandomForests Pearson Correlation: 0.4802801826449157 Spearman Correlation: 0.42266133554478724 Coefficient of Determination: 0.15048099135895376 RMSE: 0.34965692524578784 NRMSE: 0.12669647265953615 MAPE: 1040.8719225041978 Pearson Correlation: 0.23166485594101424 Spearman Correlation: 0.265023254654048 Coefficient of Determination: 0.013150583019315598 RMSE: 0.3310684520706445 NRMSE: 0.17078765428100598 MAPE: 171.55854601333823 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.5168390583924105 Spearman Correlation: 0.5403178575375212 Coefficient of Determination: 0.2671226122799537 RMSE: 0.1762760293337962 NRMSE: 0.12562968009877576 MAPE: 434.55039857005505 Pearson Correlation: 0.40637234139747164 Spearman Correlation: 0.40395266773899924 Coefficient of Determination: -0.32513630193522625 RMSE: 0.23920368452191235 NRMSE: 0.21290179657325267 MAPE: 926.9153647230173 Predictor: ElasticNet Pearson Correlation: 0.4502411301921341 Spearman Correlation: 0.4784511370923908 Coefficient of Determination: 0.1857680114143465 RMSE: 0.18580255360695666 NRMSE: 0.13241911256678354 MAPE: 354.601296657717 Pearson Correlation: 0.4883564579220066 Spearman Correlation: 0.4209204603548673 Coefficient of Determination: 0.1440457340763096 RMSE: 0.19224845996101944 NRMSE: 0.1711095821786669 MAPE: 304.9277412813807 Predictor: RandomForests Pearson Correlation: 0.5492470972367409 Spearman Correlation: 0.5433468367086957 Coefficient of Determination: 0.2574319733918553 RMSE: 0.17743762712931946 NRMSE: 0.12645753604723653 MAPE: 435.61382629898475 Pearson Correlation: 0.450451981096876 Spearman Correlation: 0.3980673075724137 Coefficient of Determination: 0.12512572123777044 RMSE: 0.194361576653241 NRMSE: 0.1729903489446223 MAPE: 635.6356775073434 Protein: PTEN Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AR', 'BCR', 'CD79A', 'CD79B', 'CDIPT', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'DLG1', 'EGFR', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'FOXO3', 'FOXO4', 'FRK', 'GRB2', 'HRAS', 'INPP4A', 'INPP4B', 'INPP5B', 'INPP5D', 'INPP5J', 'INPP5K', 'INPPL1', 'IPMK', 'IRS1', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'MAST2', 'MDM2', 'MDM4', 'MKRN1', 'MTOR', 'MYC', 'NEDD4', 'NOTCH1', 'OCRL', 'OTUD3', 'PARK7', 'PDGFB', 'PDGFRB', 'PI4K2A', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIKFYVE', 'PIP4K2A', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PML', 'PREX2', 'PSMA6', 'PSMA7', 'PSMB9', 'PSMC6', 'PSMD10', 'PSMD5', 'PSME3', 'PTK2', 'RICTOR', 'RNF146', 'ROCK1', 'ROCK2', 'RPS27A', 'RPS6KB1', 'SACM1L', 'SHC1', 'SLC9A3R1', 'SLC9A3R2', 'SOS1', 'STK11', 'STUB1', 'SYNJ1', 'SYNJ2', 'TNKS2', 'TNKS', 'TNRC6A', 'TNRC6B', 'TP53', 'UBB', 'UBC', 'USP13', 'USP7', 'WWP2', 'XIAP', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 0.5770441596771162 Spearman Correlation: 0.5568087081035928 Coefficient of Determination: 0.33297996221746906 RMSE: 0.458814053996104 NRMSE: 0.08875233170769575 MAPE: 471.7931463715707 Pearson Correlation: 0.2693801823144759 Spearman Correlation: 0.3216773276474769 Coefficient of Determination: 0.02512513002953598 RMSE: 0.7361454998995667 NRMSE: 0.11510366662490293 MAPE: 735.2465334721534 Predictor: ElasticNet Pearson Correlation: 0.535493166135449 Spearman Correlation: 0.5212301561079363 Coefficient of Determination: 0.27468401147794375 RMSE: 0.4784437630366053 NRMSE: 0.09254947443450273 MAPE: 311.1963272781079 Pearson Correlation: 0.3811692135381625 Spearman Correlation: 0.4217932891931321 Coefficient of Determination: 0.1389694684554622 RMSE: 0.6918285807954846 NRMSE: 0.10817427578695717 MAPE: 423.53238174077165 Predictor: RandomForests Pearson Correlation: 0.5482440039800978 Spearman Correlation: 0.5008355919250681 Coefficient of Determination: 0.2587059902201798 RMSE: 0.48368488651714353 NRMSE: 0.09356330983386404 MAPE: 188.87375994782946 Pearson Correlation: 0.5167831029968877 Spearman Correlation: 0.4806436046832455 Coefficient of Determination: 0.2239414646934551 RMSE: 0.656805020411679 NRMSE: 0.10269799396633242 MAPE: 309.59387554589847 Protein: BRCA2 Protein Interaction Partners Count: 100 x_train_column_count: 99 x_train columns: ['ATM', 'ATRIP', 'ATR', 'BARD1', 'BLM', 'BRCA1', 'BRIP1', 'SLX4', 'RHNO1', 'RMI2', 'CDK2', 'CDK4', 'CHEK1', 'CHEK2', 'DMC1', 'DNA2', 'EME1', 'EME2', 'EXO1', 'FANCD2', 'FANCE', 'FANCG', 'FANCI', 'GEN1', 'H2AFX', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HUS1', 'KAT5', 'SPIDR', 'MLH1', 'MLH3', 'MND1', 'MRE11A', 'MSH4', 'MSH5', 'MUS81', 'NBN', 'PALB2', 'PARP1', 'PCNA', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'PSMC3IP', 'RAD17', 'RAD1', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD9A', 'RAD9B', 'RBBP8', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SPO11', 'SYCP3', 'TEX15', 'TOP3A', 'TOPBP1', 'TP53', 'UBA52', 'UBB', 'UBC', 'WRN', 'XRCC2', 'XRCC3', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.5065671260114402 Spearman Correlation: 0.4457829338421237 Coefficient of Determination: 0.25661025315549035 RMSE: 0.16536770479884885 NRMSE: 0.10653419539304163 MAPE: 254.77606086264052 Pearson Correlation: 0.20434036568165448 Spearman Correlation: 0.14894699435155054 Coefficient of Determination: -0.07765372281538152 RMSE: 0.21603648952015017 NRMSE: 0.20988476699939784 MAPE: 260.7488924021365 Predictor: ElasticNet Pearson Correlation: 0.36567945239786565 Spearman Correlation: 0.35982817965146613 Coefficient of Determination: 0.11124640960002397 RMSE: 0.18081443531010968 NRMSE: 0.11648538270904152 MAPE: 159.97913768764946 Pearson Correlation: 0.34840555157831643 Spearman Correlation: 0.3414581229192385 Coefficient of Determination: 0.09829743672600433 RMSE: 0.1976146542984766 NRMSE: 0.19198750065429912 MAPE: 178.84927401814775 Predictor: RandomForests Pearson Correlation: 0.5318566934237081 Spearman Correlation: 0.42883181297300554 Coefficient of Determination: 0.15830770147358475 RMSE: 0.17596208201913474 NRMSE: 0.11335936995917845 MAPE: 148.01594316382852 Pearson Correlation: 0.2035809587675015 Spearman Correlation: 0.2005236973029589 Coefficient of Determination: 0.033858378891521435 RMSE: 0.20455395963448292 NRMSE: 0.19872920658934912 MAPE: 248.0845807777245 Protein: CDKN2A Protein Interaction Partners Count: 100 x_train_column_count: 100 x_train columns: ['ABL1', 'AKT1', 'ARF1', 'BMI1', 'BRCA1', 'CBX7', 'CCND1', 'CCND2', 'CCND3', 'CCNL1', 'CDC45', 'CDC6', 'CDC7', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPB', 'CTCF', 'DAXX', 'E2F1', 'E2F2', 'E2F3', 'EGFR', 'EGR1', 'AGO1', 'AGO3', 'AGO4', 'ERBB2', 'EZH2', 'FOXM1', 'GMNN', 'HDAC1', 'HIF1A', 'HRAS', 'HUWE1', 'IL6', 'KRAS', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAX', 'MCM10', 'MCM2', 'MCM5', 'MDM2', 'MDM4', 'MGMT', 'MLH1', 'MOV10', 'MRAS', 'MTAP', 'MYCN', 'MYC', 'NPM1', 'NRAS', 'ORC5', 'PIK3CA', 'PIK3R1', 'PTEN', 'RASSF1', 'RB1', 'RPS27A', 'RRAS2', 'RRAS', 'RUNX3', 'SMAD3', 'SMAD4', 'SMARCA4', 'SUMO1', 'SUMO2', 'SUMO3', 'TBX2', 'TERT', 'TFDP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TP53', 'TP63', 'TRIP12', 'TWIST1', 'UBA52', 'UBB', 'UBC', 'UBE2I', 'USP7', 'VEGFA', 'WRN', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.7248491057409845 Spearman Correlation: 0.6509232503493716 Coefficient of Determination: 0.5254062260935048 RMSE: 0.4642927795033928 NRMSE: 0.10496050175277331 MAPE: 296.7193895284209 Pearson Correlation: 0.5469339731300369 Spearman Correlation: 0.4337934388209329 Coefficient of Determination: 0.1655929915593768 RMSE: 0.5760959840606505 NRMSE: 0.1735751684424979 MAPE: 239.93088455589339 Predictor: ElasticNet Pearson Correlation: 0.6962454818246758 Spearman Correlation: 0.6306041309403587 Coefficient of Determination: 0.475503586109977 RMSE: 0.4880925435034973 NRMSE: 0.11034080332395099 MAPE: 226.1993091945512 Pearson Correlation: 0.5835592308452598 Spearman Correlation: 0.43870123068866196 Coefficient of Determination: 0.3347924888500442 RMSE: 0.5143804432851115 NRMSE: 0.15498054934772867 MAPE: 177.07363813304352 Predictor: RandomForests Pearson Correlation: 0.6785030748887375 Spearman Correlation: 0.6100101397347005 Coefficient of Determination: 0.4526660084016304 RMSE: 0.49860556531137956 NRMSE: 0.11271743309853724 MAPE: 194.65443341141966 Pearson Correlation: 0.6044111873448079 Spearman Correlation: 0.4954905640476105 Coefficient of Determination: 0.34997621094047127 RMSE: 0.508476049802592 NRMSE: 0.15320158174226936 MAPE: 144.40960714327383 Protein: TP53 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AKT1', 'APAF1', 'ATM', 'ATR', 'AURKA', 'AURKB', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2L1', 'BCL2', 'BCL6', 'BRCA1', 'CASP8', 'CCNA2', 'CCNE1', 'CCNG1', 'CDC25C', 'CDK2', 'CDK5', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CHEK1', 'CHEK2', 'COPS5', 'CREBBP', 'DDB2', 'DDX5', 'DYRK2', 'E2F4', 'EGR1', 'EHMT2', 'EP300', 'EZH2', 'FZR1', 'GADD45A', 'GLS2', 'GSK3B', 'HDAC1', 'HDAC2', 'HIF1A', 'HIPK2', 'HSP90AA1', 'HSPA1A', 'IGFBP3', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'MAPK14', 'MAPK1', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MCL1', 'MDM2', 'MDM4', 'MSH2', 'NGFR', 'NPM1', 'PLK3', 'PMAIP1', 'PPP1R13B', 'PPP1R13L', 'PRKDC', 'PRMT5', 'PTEN', 'RB1', 'RCHY1', 'DROSHA', 'RPA1', 'RRM2B', 'SETD7', 'SETD8', 'SFN', 'SIRT1', 'SMYD2', 'SNAI1', 'SNAI2', 'SP1', 'STAT3', 'STK11', 'SUMO1', 'SUMO2', 'TBP', 'TNFRSF10A', 'TNFRSF10B', 'TP53BP1', 'TP53BP2', 'TP53INP1', 'TP53RK', 'TXN', 'UBE2I', 'USP7', 'WRN', 'XRCC6', 'YY1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 0.6660144260795982 Spearman Correlation: 0.6194033969783946 Coefficient of Determination: 0.4435752157461361 RMSE: 0.33576137500726577 NRMSE: 0.08069247176334193 MAPE: 1142.6240602171354 Pearson Correlation: 0.4607924738998885 Spearman Correlation: 0.3757179017194728 Coefficient of Determination: 0.11269311630957779 RMSE: 0.4067541445245492 NRMSE: 0.1290791268483591 MAPE: 376.2111229265096 Predictor: ElasticNet Pearson Correlation: 0.6149573525221109 Spearman Correlation: 0.5675076300730443 Coefficient of Determination: 0.362044398274485 RMSE: 0.3595197303099879 NRMSE: 0.08640224232395768 MAPE: 802.6991364601205 Pearson Correlation: 0.5069740314312162 Spearman Correlation: 0.38376288981159373 Coefficient of Determination: 0.25636076216698367 RMSE: 0.3723713076923658 NRMSE: 0.11816809713517575 MAPE: 256.90488455235965 Predictor: RandomForests Pearson Correlation: 0.6260084256272452 Spearman Correlation: 0.5648387396756926 Coefficient of Determination: 0.3376507206713698 RMSE: 0.3663287767337246 NRMSE: 0.08803863896508643 MAPE: 712.8688351753389 Pearson Correlation: 0.5540588047355898 Spearman Correlation: 0.4174417227336003 Coefficient of Determination: 0.26895005842180686 RMSE: 0.3692058593772897 NRMSE: 0.11716357558304445 MAPE: 215.8827991337366 Protein: CTNNB1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'AKT1', 'APC2', 'APC', 'AR', 'AXIN1', 'AXIN2', 'BCL9', 'BTRC', 'CASP3', 'CBY1', 'CCND1', 'CDC73', 'CDH11', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDH5', 'CDH8', 'CHD8', 'CREBBP', 'CSNK1A1', 'CSNK1E', 'CTBP1', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNBIP1', 'CTNND1', 'DVL1', 'DVL2', 'DVL3', 'EGFR', 'EGF', 'EP300', 'ERBB2', 'AMER1', 'FBXW11', 'FER', 'FGFR1', 'FOXO1', 'FOXO3', 'FYN', 'FZD1', 'FZD2', 'FZD5', 'GSK3A', 'GSK3B', 'HNF4A', 'IGF1R', 'IQGAP1', 'JUN', 'JUP', 'KDR', 'KLF4', 'LEF1', 'LRP5', 'LRP6', 'MAPK9', 'MEN1', 'MET', 'MMP7', 'MYC', 'NLK', 'NOTCH1', 'PIK3CA', 'PIK3R1', 'PITX2', 'PSEN1', 'PTPN11', 'PTPN1', 'PYGO2', 'RUVBL1', 'SKP1', 'SMAD4', 'SMAD7', 'SMARCA4', 'SOX17', 'SOX2', 'SOX6', 'SOX9', 'SRC', 'TBL1X', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TGFBR1', 'TGFBR2', 'TJP1', 'TLE1', 'VCL', 'VEGFA', 'WNT1', 'WNT3A', 'WNT8A', 'WNT8B', 'YWHAZ', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.6765721484765087 Spearman Correlation: 0.6544306788468376 Coefficient of Determination: 0.457749872094119 RMSE: 0.5238778929236753 NRMSE: 0.12652832888698562 MAPE: 384.9961841054941 Pearson Correlation: 0.2680839469649285 Spearman Correlation: 0.35945834736093973 Coefficient of Determination: -0.29980315707023575 RMSE: 0.914869361099578 NRMSE: 0.1923449165544483 MAPE: 812.4894971280623 Predictor: ElasticNet Pearson Correlation: 0.6546504798402604 Spearman Correlation: 0.629444268113364 Coefficient of Determination: 0.4154759919090899 RMSE: 0.5439154777078562 NRMSE: 0.1313678576243494 MAPE: 565.854241854572 Pearson Correlation: 0.4384622816865591 Spearman Correlation: 0.4305664659160339 Coefficient of Determination: 0.15015079974419132 RMSE: 0.739760647309287 NRMSE: 0.1555295280693985 MAPE: 391.4144668211554 Predictor: RandomForests Pearson Correlation: 0.6298361851047681 Spearman Correlation: 0.6034829557413277 Coefficient of Determination: 0.38525123555487584 RMSE: 0.5578007229258137 NRMSE: 0.13472145757072113 MAPE: 462.6803024204656 Pearson Correlation: 0.6869391646082794 Spearman Correlation: 0.46173892442549164 Coefficient of Determination: 0.31216754394539836 RMSE: 0.6655207824715764 NRMSE: 0.13992111312580446 MAPE: 582.5516266649797 Protein: CCNE1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['ABL1', 'BARD1', 'BRCA1', 'CABLES1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNH', 'CCT2', 'CCT3', 'CCT4', 'CCT6A', 'CCT7', 'CDC25A', 'CDC6', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDT1', 'CKS1B', 'CKS2', 'CUL1', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'EP400', 'FOXM1', 'HDAC1', 'IFNAR1', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'MNAT1', 'MYC', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PCNA', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB7', 'PSMC1', 'PSMC2', 'PSMC4', 'PSMC5', 'PSMD10', 'PSMD11', 'PSMD14', 'PSMD1', 'PSMD3', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSME3', 'PTK6', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RHOA', 'RPS27A', 'RRN3', 'SKP1', 'SKP2', 'STAT5A', 'STAT5B', 'TCP1', 'TFDP1', 'TP53', 'TP73', 'UBB', 'UBC', 'WEE1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.8820824089641275 Spearman Correlation: 0.6787743596799631 Coefficient of Determination: 0.7780693762039579 RMSE: 0.2378108702609133 NRMSE: 0.05739094776670929 MAPE: 51.625127606464105 Pearson Correlation: 0.7769371602643158 Spearman Correlation: 0.636549084153169 Coefficient of Determination: 0.5976084252785823 RMSE: 0.28678171353158216 NRMSE: 0.1170251014166254 MAPE: 61.53940674464793 Predictor: ElasticNet Pearson Correlation: 0.8572500336947023 Spearman Correlation: 0.6684361337164868 Coefficient of Determination: 0.7295764310353419 RMSE: 0.26250969981795186 NRMSE: 0.06335152154305376 MAPE: 53.436543529576895 Pearson Correlation: 0.7997098269351021 Spearman Correlation: 0.6817765807553712 Coefficient of Determination: 0.625115833091902 RMSE: 0.2768060418089218 NRMSE: 0.11295439558023417 MAPE: 68.32722873491994 Predictor: RandomForests Pearson Correlation: 0.8565870302724811 Spearman Correlation: 0.7165380852645807 Coefficient of Determination: 0.7296686800316297 RMSE: 0.26246492132105786 NRMSE: 0.06334071513889951 MAPE: 55.385584777179474 Pearson Correlation: 0.8423483880610949 Spearman Correlation: 0.7087570314332251 Coefficient of Determination: 0.7005549918089391 RMSE: 0.24739194483907934 NRMSE: 0.10095158117974348 MAPE: 74.36074031684599 Protein: CCND1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ACTL6A', 'AKT1', 'ARID1A', 'ARID2', 'AR', 'ATF2', 'BRD2', 'BTG2', 'CCNA1', 'CCNB1', 'CCNE1', 'CCNH', 'CDC25A', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CKS1B', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUL1', 'DNMT3A', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'AGO2', 'EP300', 'ESR1', 'FOS', 'FOXA1', 'FOXM1', 'GADD45A', 'GATA3', 'GLI1', 'GLI3', 'GSK3B', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC4', 'HIST1H2BA', 'HIST2H2BE', 'HNF1A', 'IFNAR1', 'JAK2', 'JUN', 'KAT2B', 'LEF1', 'LYN', 'MAML1', 'MYB', 'MYC', 'NOTCH1', 'PBRM1', 'PCNA', 'PRMT5', 'PSMA6', 'PSMC6', 'PSMD10', 'PSMD6', 'PSMD7', 'PSME3', 'PTK6', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RELA', 'RUNX1', 'RUNX3', 'SKP1', 'SKP2', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'SUV39H1', 'TCF7L2', 'TFDP1', 'TP53', 'WDR77', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 0.5745038038175605 Spearman Correlation: 0.5396778432288746 Coefficient of Determination: 0.3300546206008458 RMSE: 0.19669186609389477 NRMSE: 0.12566403834214665 MAPE: 572.9394168021341 Pearson Correlation: 0.3227035671474683 Spearman Correlation: 0.316440354617888 Coefficient of Determination: -0.0014348772032466428 RMSE: 0.22916608703403737 NRMSE: 0.14452957053105284 MAPE: 518.1410701654149 Predictor: ElasticNet Pearson Correlation: 0.4679762640719183 Spearman Correlation: 0.45565698568306434 Coefficient of Determination: 0.20497597242660515 RMSE: 0.21426776015810156 NRMSE: 0.13689306305701535 MAPE: 509.7685135702779 Pearson Correlation: 0.4889007088738842 Spearman Correlation: 0.39087021035175007 Coefficient of Determination: 0.1983569809352963 RMSE: 0.20503570719123757 NRMSE: 0.1293111170479551 MAPE: 470.1066521497687 Predictor: RandomForests Pearson Correlation: 0.5449419150508589 Spearman Correlation: 0.5060722495807217 Coefficient of Determination: 0.2553511196797267 RMSE: 0.20736835045187313 NRMSE: 0.13248511420239525 MAPE: 471.55277629370164 Pearson Correlation: 0.4789593490371943 Spearman Correlation: 0.43193077178093386 Coefficient of Determination: 0.20473356084489525 RMSE: 0.20421861225188792 NRMSE: 0.1287957948107265 MAPE: 474.9640282427148 Protein: ERBB2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ADAM17', 'ADRB2', 'AREG', 'ARHGEF11', 'ARHGEF12', 'BTC', 'CBL', 'CCND1', 'CD44', 'CDC37', 'CDH1', 'CTNNB1', 'CTNND1', 'CUL5', 'DIAPH1', 'DOCK7', 'EGFR', 'EGF', 'ERBB2IP', 'ERBB3', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FYN', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IL6R', 'IL6', 'INS', 'JAK1', 'JAK2', 'KRAS', 'LRPPRC', 'MAP2K1', 'MAPK8', 'MATK', 'MEMO1', 'MUC1', 'MUC4', 'MYC', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'PGAP3', 'PGR', 'PIK3CA', 'PIK3CB', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PLXNB1', 'PRKACA', 'PTEN', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'RHOA', 'RHOB', 'RHOC', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'RPS27A', 'SEMA4D', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SRC', 'STAT1', 'STAT3', 'STUB1', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TGFA', 'TP53', 'UBA52', 'UBB', 'UBC', 'VEGFA', 'YES1', 'YY1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 0.8553565258321233 Spearman Correlation: 0.7251730294326125 Coefficient of Determination: 0.7316347862835997 RMSE: 0.5081063524984162 NRMSE: 0.08656427969034468 MAPE: 475.68009763595296 Pearson Correlation: 0.7760100941603886 Spearman Correlation: 0.5734841749704267 Coefficient of Determination: 0.564385880902902 RMSE: 0.6842106759841792 NRMSE: 0.12320572549864572 MAPE: 290.1927712454496 Predictor: ElasticNet Pearson Correlation: 0.8453774431549175 Spearman Correlation: 0.71588549441021 Coefficient of Determination: 0.711225538598205 RMSE: 0.5270731651576336 NRMSE: 0.08979558838741905 MAPE: 509.1777461119362 Pearson Correlation: 0.7806544727085343 Spearman Correlation: 0.5976341321394341 Coefficient of Determination: 0.5904432270867593 RMSE: 0.6634312564215133 NRMSE: 0.11946397817940602 MAPE: 226.01822007536714 Predictor: RandomForests Pearson Correlation: 0.8504928402137844 Spearman Correlation: 0.6382173011711788 Coefficient of Determination: 0.7199156170936907 RMSE: 0.5190819903990866 NRMSE: 0.08843416024653503 MAPE: 441.0256879142006 Pearson Correlation: 0.7841628552095843 Spearman Correlation: 0.6794134113363717 Coefficient of Determination: 0.5622509444231605 RMSE: 0.6858852784224256 NRMSE: 0.12350727093716024 MAPE: 216.17263456060311 Protein: ERBB3 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AKT2', 'ANGPT1', 'ANGPT2', 'AREG', 'AR', 'BDNF', 'BMP4', 'BTC', 'CBLB', 'CBL', 'CCND1', 'CDH1', 'CSF1', 'CSK', 'CTNNB1', 'DCN', 'DOCK7', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FGF10', 'FGF19', 'FGF1', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FIGF', 'FLNA', 'FOXO3', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IGF1', 'IGF2', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'JAK1', 'JAK2', 'KITLG', 'KRAS', 'LAMA1', 'LAMB1', 'LAMC2', 'MAP2K1', 'MAPK8', 'MET', 'MUC4', 'NGF', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NTF3', 'PA2G4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PRKACA', 'PTEN', 'PTPN11', 'RNF41', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SOX10', 'SRC', 'TGFA', 'VEGFA', 'VEGFB', 'VEGFC', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.5911038471831644 Spearman Correlation: 0.5885325215651557 Coefficient of Determination: 0.34940375815473756 RMSE: 0.3853234319160893 NRMSE: 0.10536051775163154 MAPE: 220.02783685246982 Pearson Correlation: 0.28873422901555557 Spearman Correlation: 0.3027095100936421 Coefficient of Determination: -0.2005979052433109 RMSE: 0.4213921196595742 NRMSE: 0.20741169562949405 MAPE: 233.39127559068373 Predictor: ElasticNet Pearson Correlation: 0.5465292399450619 Spearman Correlation: 0.5560269369856633 Coefficient of Determination: 0.2907724883531019 RMSE: 0.40231148572747355 NRMSE: 0.11000562883729682 MAPE: 213.8997759578423 Pearson Correlation: 0.3629154215830585 Spearman Correlation: 0.3593735582737939 Coefficient of Determination: 0.10317034765860089 RMSE: 0.36420222832890087 NRMSE: 0.17926249259422095 MAPE: 191.43617658423508 Predictor: RandomForests Pearson Correlation: 0.5547876126766105 Spearman Correlation: 0.5902516503880699 Coefficient of Determination: 0.2910243708930592 RMSE: 0.4022400388108429 NRMSE: 0.10998609282286206 MAPE: 238.34134072195064 Pearson Correlation: 0.42628279500567845 Spearman Correlation: 0.3530692402648412 Coefficient of Determination: 0.16742561662904665 RMSE: 0.3509127445071989 NRMSE: 0.17272132999315779 MAPE: 242.66558427817895 Fold: 5 Protein: RB1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AATF', 'ABL1', 'AKT1', 'AR', 'ASF1A', 'ATF2', 'BGLAP', 'CASP3', 'CBX4', 'CCNA1', 'CCNA2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CEBPA', 'COL1A1', 'CREBBP', 'CTBP1', 'DNMT1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'ELF1', 'EP300', 'FOXM1', 'FZR1', 'GNB2L1', 'H1F0', 'H2AFV', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HIST1H2BA', 'HIST2H2AC', 'HIST2H2BE', 'HMGA1', 'HMGA2', 'HSP90AA1', 'ID2', 'JUN', 'MAPK14', 'MAPK1', 'MAPK3', 'MDM2', 'MEF2C', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NFYC', 'PCNA', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP2CA', 'PPP2CB', 'PRIM1', 'PRIM2', 'RAF1', 'RBBP4', 'RUNX2', 'SIRT1', 'SKP2', 'SMARCA2', 'SMC2', 'SMC4', 'SP100', 'SP1', 'SP3', 'SPI1', 'SUV39H1', 'TAF1', 'TBP', 'TERT', 'TFDP1', 'TP53BP1', 'TP53', 'TP73', 'YAP1', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.5069043132899446 Spearman Correlation: 0.4933311406845556 Coefficient of Determination: 0.25695198283195053 RMSE: 0.20162670996648344 NRMSE: 0.09960662077258188 MAPE: 335.85106635664704 Pearson Correlation: 0.13212505004393518 Spearman Correlation: 0.0680781555879749 Coefficient of Determination: -0.9528119081424595 RMSE: 0.33589968237517676 NRMSE: 0.1693623229610838 MAPE: 665.3429629554577 Predictor: ElasticNet Pearson Correlation: 0.3680683334344593 Spearman Correlation: 0.38587650345008884 Coefficient of Determination: 0.11635487718798831 RMSE: 0.2198763739053843 NRMSE: 0.10862222865256631 MAPE: 149.6380795591206 Pearson Correlation: 0.02364759141045366 Spearman Correlation: 0.12588935024127484 Coefficient of Determination: -0.13696322989277054 RMSE: 0.2563023543708689 NRMSE: 0.1292289466000791 MAPE: 467.65354988425696 Predictor: RandomForests Pearson Correlation: 0.5510514394759319 Spearman Correlation: 0.48981283330666364 Coefficient of Determination: 0.16481628290012207 RMSE: 0.21376206347840973 NRMSE: 0.10560166753699417 MAPE: 151.14884520496926 Pearson Correlation: 0.02605859379354594 Spearman Correlation: 0.12342049152732579 Coefficient of Determination: -0.1357599151765001 RMSE: 0.2561666885759467 NRMSE: 0.12916054321841494 MAPE: 299.5254744685065 Protein: CDH1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ACTA1', 'ACTN1', 'ADAM10', 'ADAM15', 'CA2', 'CASP3', 'CBLL1', 'CDC42', 'CDH17', 'CDH3', 'CDH5', 'CTBP1', 'CTNNA1', 'CTNNB1', 'CTNND1', 'CTTN', 'DLG1', 'EFNA1', 'EGFR', 'EGF', 'ENAH', 'EPCAM', 'EPHA2', 'EXOC3', 'EXOC4', 'FER', 'FLOT1', 'FLOT2', 'FMN1', 'FYN', 'GDNF', 'GNA12', 'GNA13', 'HGF', 'HGS', 'IGF1R', 'IGF1', 'IGF2', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'ITGA6', 'ITGAE', 'ITGB4', 'ITGB7', 'AJUBA', 'JUP', 'KIFC3', 'KLK7', 'KLRG1', 'LAMB1', 'LAMC2', 'LIMA1', 'MAPK1', 'MAPK3', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MLLT4', 'MMP3', 'MMP7', 'MMP9', 'MYO6', 'NCSTN', 'NUMB', 'PARD6A', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PLEKHA7', 'PLG', 'PRKCI', 'PRKCZ', 'PSEN1', 'PVRL1', 'PVRL2', 'RAB5A', 'RAB7A', 'RAC1', 'RAP1A', 'RET', 'RHOA', 'SKIL', 'SMAD3', 'SMAD4', 'SNAI1', 'SNAI2', 'SNAI3', 'SRC', 'STX4', 'TJP1', 'TWIST1', 'VASP', 'VCL', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.7669918179182276 Spearman Correlation: 0.720670930490041 Coefficient of Determination: 0.5882764487535077 RMSE: 0.7225523535540025 NRMSE: 0.11505244316327544 MAPE: 255.1832494596761 Pearson Correlation: 0.45532449682320447 Spearman Correlation: 0.4506415291961246 Coefficient of Determination: 0.12429579500742494 RMSE: 1.0871527522298379 NRMSE: 0.21379181377550843 MAPE: 1771.789591282134 Predictor: ElasticNet Pearson Correlation: 0.7417038803624716 Spearman Correlation: 0.7131274069833423 Coefficient of Determination: 0.5377188704724146 RMSE: 0.7656310676268028 NRMSE: 0.12191189255546045 MAPE: 258.01443622248496 Pearson Correlation: 0.5082997174125289 Spearman Correlation: 0.5218743375852567 Coefficient of Determination: 0.2446877677718885 RMSE: 1.0096599072929866 NRMSE: 0.1985526159353772 MAPE: 1673.5933598098309 Predictor: RandomForests Pearson Correlation: 0.7799313376460936 Spearman Correlation: 0.7090491909145105 Coefficient of Determination: 0.6035252887651239 RMSE: 0.7090456724260381 NRMSE: 0.11290176625362855 MAPE: 143.65822804362995 Pearson Correlation: 0.6325713228980736 Spearman Correlation: 0.5790421326949216 Coefficient of Determination: 0.39036844945245475 RMSE: 0.9070799546337237 NRMSE: 0.1783799639404778 MAPE: 391.78972810588476 Protein: CDH2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ADAM10', 'AFP', 'AHSG', 'ALB', 'APLP2', 'APOA1', 'APOB', 'APOE', 'APP', 'AXIN1', 'BDNF', 'BMP4', 'BNIP2', 'CALU', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH17', 'CDH18', 'CDH1', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDON', 'CREBBP', 'CSF1', 'CST3', 'CTNNA1', 'CTNNA2', 'CTNNB1', 'CTNND1', 'CYR61', 'FAM20C', 'FBN1', 'FER', 'FGFR1', 'FN1', 'FSTL1', 'GAS6', 'GJA1', 'GOLM1', 'GPC3', 'GRIA2', 'HSP90B1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL6', 'ITIH2', 'JUP', 'KIF5B', 'KNG1', 'KTN1', 'LAMB1', 'LAMC1', 'LGALS1', 'LRP5', 'LTBP1', 'MAP2K6', 'MAPK11', 'MAPK14', 'MATN3', 'MEF2A', 'MEF2C', 'MEF2D', 'MET', 'MFGE8', 'MSLN', 'NTRK2', 'P4HB', 'PCSK9', 'PIK3CA', 'PIK3R1', 'PTPN11', 'PTPN1', 'RAC1', 'RHOA', 'ROBO1', 'SCG2', 'SDC2', 'SERPINA1', 'SLIT1', 'SNAI1', 'SNAI2', 'SPAG9', 'SPARCL1', 'SPP1', 'STC2', 'TCF3', 'TIMP1', 'TMEM132A', 'TNC', 'VCAN', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.5556584265961241 Spearman Correlation: 0.5213035770127588 Coefficient of Determination: 0.30875628704728 RMSE: 0.2985898428211713 NRMSE: 0.146647926340146 MAPE: 654.2223290290963 Pearson Correlation: 0.025332876905472774 Spearman Correlation: 0.017698497111570153 Coefficient of Determination: -0.500551231293026 RMSE: 0.5109246194136265 NRMSE: 0.1910605685595896 MAPE: 1789.432309930936 Predictor: ElasticNet Pearson Correlation: 0.4874116688127269 Spearman Correlation: 0.47947289193996595 Coefficient of Determination: 0.2137678751168024 RMSE: 0.3184452868012114 NRMSE: 0.15639963007770316 MAPE: 348.42886038080394 Pearson Correlation: 0.05642162740829996 Spearman Correlation: 0.018755868222646063 Coefficient of Determination: -0.07290877174334254 RMSE: 0.43202891488675044 NRMSE: 0.16155747242553725 MAPE: 1501.3005806821322 Predictor: RandomForests Pearson Correlation: 0.5285637165501145 Spearman Correlation: 0.5013115821333234 Coefficient of Determination: 0.18513038283366956 RMSE: 0.3241928972348436 NRMSE: 0.1592224828028307 MAPE: 614.3664363558341 Pearson Correlation: -0.0009606234420610378 Spearman Correlation: 0.05920530082088023 Coefficient of Determination: -0.043030332517606906 RMSE: 0.4259708549107756 NRMSE: 0.15929205725586656 MAPE: 746.8766141129609 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.5673091310268193 Spearman Correlation: 0.5626739259885083 Coefficient of Determination: 0.3218396501464048 RMSE: 0.16780377651762476 NRMSE: 0.11772729452041925 MAPE: 709.9636165398706 Pearson Correlation: 0.331186113594164 Spearman Correlation: 0.42593299168318816 Coefficient of Determination: -0.15607735928306354 RMSE: 0.2401935505272332 NRMSE: 0.21670490578878662 MAPE: 496.54759058394626 Predictor: ElasticNet Pearson Correlation: 0.4923049629334327 Spearman Correlation: 0.5091713554089479 Coefficient of Determination: 0.2217221338812324 RMSE: 0.1797640621326156 NRMSE: 0.1261183575606272 MAPE: 555.3355400238473 Pearson Correlation: 0.4047295719345903 Spearman Correlation: 0.44003790570954754 Coefficient of Determination: 0.14881029149837532 RMSE: 0.20610146363178342 NRMSE: 0.1859467007387142 MAPE: 199.38122280190262 Predictor: RandomForests Pearson Correlation: 0.5532215556161209 Spearman Correlation: 0.5652630676722618 Coefficient of Determination: 0.26825766681949326 RMSE: 0.17430691798156686 NRMSE: 0.1222897499449731 MAPE: 575.6799278137305 Pearson Correlation: 0.4392656012482198 Spearman Correlation: 0.4789660718961583 Coefficient of Determination: 0.17143896120733582 RMSE: 0.20334343131470894 NRMSE: 0.18345837775034865 MAPE: 212.27010258558812 Protein: PTEN Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AR', 'BCR', 'CD79A', 'CD79B', 'CDIPT', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'DLG1', 'EGFR', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'FOXO3', 'FOXO4', 'FRK', 'GRB2', 'HRAS', 'INPP4A', 'INPP4B', 'INPP5B', 'INPP5D', 'INPP5J', 'INPP5K', 'INPPL1', 'IPMK', 'IRS1', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'MAST2', 'MDM2', 'MDM4', 'MKRN1', 'MTOR', 'MYC', 'NEDD4', 'NOTCH1', 'OCRL', 'OTUD3', 'PARK7', 'PDGFB', 'PDGFRB', 'PI4K2A', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIKFYVE', 'PIP4K2A', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PML', 'PREX2', 'PSMA6', 'PSMA7', 'PSMB9', 'PSMC6', 'PSMD10', 'PSMD5', 'PSME3', 'PTK2', 'RICTOR', 'RNF146', 'ROCK1', 'ROCK2', 'RPS27A', 'RPS6KB1', 'SACM1L', 'SHC1', 'SLC9A3R1', 'SLC9A3R2', 'SOS1', 'STK11', 'STUB1', 'SYNJ1', 'SYNJ2', 'TNKS2', 'TNKS', 'TNRC6A', 'TNRC6B', 'TP53', 'UBB', 'UBC', 'USP13', 'USP7', 'WWP2', 'XIAP', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 0.5881174469723212 Spearman Correlation: 0.5586848407350578 Coefficient of Determination: 0.345882131433241 RMSE: 0.46021558270582497 NRMSE: 0.07195928116735595 MAPE: 723.8950899290604 Pearson Correlation: 0.34485272748709744 Spearman Correlation: 0.3926906819287024 Coefficient of Determination: 0.06450642308344379 RMSE: 0.6980392458099158 NRMSE: 0.13502770926375654 MAPE: 491.0047869654013 Predictor: ElasticNet Pearson Correlation: 0.5414714096427629 Spearman Correlation: 0.5357819358388994 Coefficient of Determination: 0.2780414241485051 RMSE: 0.4834921785842151 NRMSE: 0.07559880831588071 MAPE: 407.30806083618336 Pearson Correlation: 0.4281372294644778 Spearman Correlation: 0.45385353932093914 Coefficient of Determination: 0.1754358488703186 RMSE: 0.6553475200714106 NRMSE: 0.1267694831459708 MAPE: 415.5167984966844 Predictor: RandomForests Pearson Correlation: 0.5382352941738403 Spearman Correlation: 0.49365191412785264 Coefficient of Determination: 0.2645819655510754 RMSE: 0.48797823405101676 NRMSE: 0.07630024768212286 MAPE: 299.0596825838686 Pearson Correlation: 0.439603663309399 Spearman Correlation: 0.45668877013383724 Coefficient of Determination: 0.16600123407524892 RMSE: 0.6590860803901359 NRMSE: 0.12749266488512379 MAPE: 346.11339098639877 Protein: BRCA2 Protein Interaction Partners Count: 100 x_train_column_count: 99 x_train columns: ['ATM', 'ATRIP', 'ATR', 'BARD1', 'BLM', 'BRCA1', 'BRIP1', 'SLX4', 'RHNO1', 'RMI2', 'CDK2', 'CDK4', 'CHEK1', 'CHEK2', 'DMC1', 'DNA2', 'EME1', 'EME2', 'EXO1', 'FANCD2', 'FANCE', 'FANCG', 'FANCI', 'GEN1', 'H2AFX', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HUS1', 'KAT5', 'SPIDR', 'MLH1', 'MLH3', 'MND1', 'MRE11A', 'MSH4', 'MSH5', 'MUS81', 'NBN', 'PALB2', 'PARP1', 'PCNA', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'PSMC3IP', 'RAD17', 'RAD1', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD9A', 'RAD9B', 'RBBP8', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SPO11', 'SYCP3', 'TEX15', 'TOP3A', 'TOPBP1', 'TP53', 'UBA52', 'UBB', 'UBC', 'WRN', 'XRCC2', 'XRCC3', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.5283753109822057 Spearman Correlation: 0.47990150495199674 Coefficient of Determination: 0.2791804692555425 RMSE: 0.170199690265634 NRMSE: 0.10964708665848544 MAPE: 262.23714076170717 Pearson Correlation: -0.034783854304861715 Spearman Correlation: 0.16798962580580806 Coefficient of Determination: -3.9383149907867887 RMSE: 0.369085076247874 NRMSE: 0.48268498822712874 MAPE: 366.2849574657444 Predictor: ElasticNet Pearson Correlation: 0.393992013542485 Spearman Correlation: 0.3772062342848084 Coefficient of Determination: 0.13328298082442191 RMSE: 0.1866311598233427 NRMSE: 0.1202326685929088 MAPE: 167.47501251198173 Pearson Correlation: 0.22449194842919504 Spearman Correlation: 0.268743999301737 Coefficient of Determination: -0.0394410275612751 RMSE: 0.16933121262596154 NRMSE: 0.22144930703715626 MAPE: 220.7379122822491 Predictor: RandomForests Pearson Correlation: 0.5357843471418386 Spearman Correlation: 0.4450225492735351 Coefficient of Determination: 0.1737033646751981 RMSE: 0.18222731864142386 NRMSE: 0.11739559906034715 MAPE: 172.61860055586232 Pearson Correlation: 0.1583917764429902 Spearman Correlation: 0.11850771206623525 Coefficient of Determination: -0.057596239752407685 RMSE: 0.17080360790814153 NRMSE: 0.22337488773705816 MAPE: 163.95608134749864 Protein: CDKN2A Protein Interaction Partners Count: 100 x_train_column_count: 100 x_train columns: ['ABL1', 'AKT1', 'ARF1', 'BMI1', 'BRCA1', 'CBX7', 'CCND1', 'CCND2', 'CCND3', 'CCNL1', 'CDC45', 'CDC6', 'CDC7', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPB', 'CTCF', 'DAXX', 'E2F1', 'E2F2', 'E2F3', 'EGFR', 'EGR1', 'AGO1', 'AGO3', 'AGO4', 'ERBB2', 'EZH2', 'FOXM1', 'GMNN', 'HDAC1', 'HIF1A', 'HRAS', 'HUWE1', 'IL6', 'KRAS', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAX', 'MCM10', 'MCM2', 'MCM5', 'MDM2', 'MDM4', 'MGMT', 'MLH1', 'MOV10', 'MRAS', 'MTAP', 'MYCN', 'MYC', 'NPM1', 'NRAS', 'ORC5', 'PIK3CA', 'PIK3R1', 'PTEN', 'RASSF1', 'RB1', 'RPS27A', 'RRAS2', 'RRAS', 'RUNX3', 'SMAD3', 'SMAD4', 'SMARCA4', 'SUMO1', 'SUMO2', 'SUMO3', 'TBX2', 'TERT', 'TFDP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TP53', 'TP63', 'TRIP12', 'TWIST1', 'UBA52', 'UBB', 'UBC', 'UBE2I', 'USP7', 'VEGFA', 'WRN', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 0.7425365803297133 Spearman Correlation: 0.6828404953202836 Coefficient of Determination: 0.5513605731277444 RMSE: 0.45525841233882924 NRMSE: 0.11592737957750739 MAPE: 252.29880528087324 Pearson Correlation: 0.4085677287116557 Spearman Correlation: 0.42302023716006437 Coefficient of Determination: 0.04243236786416393 RMSE: 0.5929541939518608 NRMSE: 0.1492046485875697 MAPE: 386.89826308444094 Predictor: ElasticNet Pearson Correlation: 0.7227617296204824 Spearman Correlation: 0.6635542279276126 Coefficient of Determination: 0.5148187411940883 RMSE: 0.47343599004293274 NRMSE: 0.12055613303530156 MAPE: 223.65554554376095 Pearson Correlation: 0.4005321700293596 Spearman Correlation: 0.40718462823725987 Coefficient of Determination: 0.11640039907210964 RMSE: 0.5695923816194614 NRMSE: 0.1433261321102794 MAPE: 286.1278351175799 Predictor: RandomForests Pearson Correlation: 0.7070760359539651 Spearman Correlation: 0.6156068997241199 Coefficient of Determination: 0.495831069043139 RMSE: 0.48261109340110386 NRMSE: 0.12289248896160115 MAPE: 196.31830226324485 Pearson Correlation: 0.38271414956951605 Spearman Correlation: 0.365257964819361 Coefficient of Determination: -0.027691046414497933 RMSE: 0.6142818772439601 NRMSE: 0.154571318598918 MAPE: 458.3069491129188 Protein: TP53 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AKT1', 'APAF1', 'ATM', 'ATR', 'AURKA', 'AURKB', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2L1', 'BCL2', 'BCL6', 'BRCA1', 'CASP8', 'CCNA2', 'CCNE1', 'CCNG1', 'CDC25C', 'CDK2', 'CDK5', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CHEK1', 'CHEK2', 'COPS5', 'CREBBP', 'DDB2', 'DDX5', 'DYRK2', 'E2F4', 'EGR1', 'EHMT2', 'EP300', 'EZH2', 'FZR1', 'GADD45A', 'GLS2', 'GSK3B', 'HDAC1', 'HDAC2', 'HIF1A', 'HIPK2', 'HSP90AA1', 'HSPA1A', 'IGFBP3', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'MAPK14', 'MAPK1', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MCL1', 'MDM2', 'MDM4', 'MSH2', 'NGFR', 'NPM1', 'PLK3', 'PMAIP1', 'PPP1R13B', 'PPP1R13L', 'PRKDC', 'PRMT5', 'PTEN', 'RB1', 'RCHY1', 'DROSHA', 'RPA1', 'RRM2B', 'SETD7', 'SETD8', 'SFN', 'SIRT1', 'SMYD2', 'SNAI1', 'SNAI2', 'SP1', 'STAT3', 'STK11', 'SUMO1', 'SUMO2', 'TBP', 'TNFRSF10A', 'TNFRSF10B', 'TP53BP1', 'TP53BP2', 'TP53INP1', 'TP53RK', 'TXN', 'UBE2I', 'USP7', 'WRN', 'XRCC6', 'YY1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.6738138093178626 Spearman Correlation: 0.6342899958074839 Coefficient of Determination: 0.45402504962744916 RMSE: 0.31314109830287173 NRMSE: 0.07964116541694137 MAPE: 961.2645961684842 Pearson Correlation: 0.4303860224633639 Spearman Correlation: 0.31346276138106466 Coefficient of Determination: 0.15603913228768018 RMSE: 0.4851935040224086 NRMSE: 0.1299567440799273 MAPE: 247.9918417207265 Predictor: ElasticNet Pearson Correlation: 0.6171691222418795 Spearman Correlation: 0.5623880179964166 Coefficient of Determination: 0.36617027134631464 RMSE: 0.3373960658753952 NRMSE: 0.0858099305362281 MAPE: 758.3667292314818 Pearson Correlation: 0.4704209761596821 Spearman Correlation: 0.393842815995212 Coefficient of Determination: 0.21236571287256167 RMSE: 0.4687228541010969 NRMSE: 0.12554515979673145 MAPE: 185.14069150341828 Predictor: RandomForests Pearson Correlation: 0.6316797160440648 Spearman Correlation: 0.562487239141467 Coefficient of Determination: 0.34963697457635856 RMSE: 0.3417681858048986 NRMSE: 0.08692189165667963 MAPE: 737.5776386594723 Pearson Correlation: 0.5373916819353073 Spearman Correlation: 0.46615793214379236 Coefficient of Determination: 0.2461220782133937 RMSE: 0.45856862270338944 NRMSE: 0.12282539780457732 MAPE: 181.77701701915015 Protein: CTNNB1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'AKT1', 'APC2', 'APC', 'AR', 'AXIN1', 'AXIN2', 'BCL9', 'BTRC', 'CASP3', 'CBY1', 'CCND1', 'CDC73', 'CDH11', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDH5', 'CDH8', 'CHD8', 'CREBBP', 'CSNK1A1', 'CSNK1E', 'CTBP1', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNBIP1', 'CTNND1', 'DVL1', 'DVL2', 'DVL3', 'EGFR', 'EGF', 'EP300', 'ERBB2', 'AMER1', 'FBXW11', 'FER', 'FGFR1', 'FOXO1', 'FOXO3', 'FYN', 'FZD1', 'FZD2', 'FZD5', 'GSK3A', 'GSK3B', 'HNF4A', 'IGF1R', 'IQGAP1', 'JUN', 'JUP', 'KDR', 'KLF4', 'LEF1', 'LRP5', 'LRP6', 'MAPK9', 'MEN1', 'MET', 'MMP7', 'MYC', 'NLK', 'NOTCH1', 'PIK3CA', 'PIK3R1', 'PITX2', 'PSEN1', 'PTPN11', 'PTPN1', 'PYGO2', 'RUVBL1', 'SKP1', 'SMAD4', 'SMAD7', 'SMARCA4', 'SOX17', 'SOX2', 'SOX6', 'SOX9', 'SRC', 'TBL1X', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TGFBR1', 'TGFBR2', 'TJP1', 'TLE1', 'VCL', 'VEGFA', 'WNT1', 'WNT3A', 'WNT8A', 'WNT8B', 'YWHAZ', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.6526406893436886 Spearman Correlation: 0.6267146051743737 Coefficient of Determination: 0.42593986938700545 RMSE: 0.57278212337644 NRMSE: 0.1126636749363572 MAPE: 384.1475462062339 Pearson Correlation: 0.453154264598859 Spearman Correlation: 0.48742503023728484 Coefficient of Determination: 0.11211316467729593 RMSE: 0.6385416144795081 NRMSE: 0.2045041184731914 MAPE: 274.7887018572922 Predictor: ElasticNet Pearson Correlation: 0.6313452896495433 Spearman Correlation: 0.6084720539852467 Coefficient of Determination: 0.3872464958896684 RMSE: 0.5917709803379795 NRMSE: 0.11639869794216749 MAPE: 591.6257568965597 Pearson Correlation: 0.5904847285117965 Spearman Correlation: 0.5661940921956633 Coefficient of Determination: 0.3326583573888695 RMSE: 0.5535852507069179 NRMSE: 0.17729535730863788 MAPE: 240.56213187285152 Predictor: RandomForests Pearson Correlation: 0.6500198031853741 Spearman Correlation: 0.6118736664069518 Coefficient of Determination: 0.4116050738445375 RMSE: 0.5798894690380171 NRMSE: 0.11406165795397662 MAPE: 450.9043588685739 Pearson Correlation: 0.6449716017629087 Spearman Correlation: 0.5524033965510792 Coefficient of Determination: 0.4093656974223425 RMSE: 0.5207985071329085 NRMSE: 0.16679482932398212 MAPE: 189.51992936304015 Protein: CCNE1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['ABL1', 'BARD1', 'BRCA1', 'CABLES1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNH', 'CCT2', 'CCT3', 'CCT4', 'CCT6A', 'CCT7', 'CDC25A', 'CDC6', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDT1', 'CKS1B', 'CKS2', 'CUL1', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'EP400', 'FOXM1', 'HDAC1', 'IFNAR1', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'MNAT1', 'MYC', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PCNA', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB7', 'PSMC1', 'PSMC2', 'PSMC4', 'PSMC5', 'PSMD10', 'PSMD11', 'PSMD14', 'PSMD1', 'PSMD3', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSME3', 'PTK6', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RHOA', 'RPS27A', 'RRN3', 'SKP1', 'SKP2', 'STAT5A', 'STAT5B', 'TCP1', 'TFDP1', 'TP53', 'TP73', 'UBB', 'UBC', 'WEE1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.8760919073932413 Spearman Correlation: 0.7143342518518204 Coefficient of Determination: 0.7675370301999275 RMSE: 0.21638295783039596 NRMSE: 0.07707318177396116 MAPE: 43.931827017183224 Pearson Correlation: 0.8453919758325693 Spearman Correlation: 0.6564196561054377 Coefficient of Determination: 0.6686447678442662 RMSE: 0.3730665627744353 NRMSE: 0.09003223273268704 MAPE: 86.8876169758697 Predictor: ElasticNet Pearson Correlation: 0.843310638945376 Spearman Correlation: 0.6817043693871495 Coefficient of Determination: 0.701687720727497 RMSE: 0.2451216816060795 NRMSE: 0.08730959273591433 MAPE: 49.85959789773433 Pearson Correlation: 0.8587646375050882 Spearman Correlation: 0.6978067058192746 Coefficient of Determination: 0.7313927834174854 RMSE: 0.33589090755537976 NRMSE: 0.08106062397262827 MAPE: 84.47547365302903 Predictor: RandomForests Pearson Correlation: 0.8609336470602248 Spearman Correlation: 0.7122151343323968 Coefficient of Determination: 0.7389225050321655 RMSE: 0.22931416406891622 NRMSE: 0.08167913234867898 MAPE: 55.15936379531276 Pearson Correlation: 0.7842409547452408 Spearman Correlation: 0.7298882776945675 Coefficient of Determination: 0.5852977132552424 RMSE: 0.4173569256533583 NRMSE: 0.10072083540153928 MAPE: 77.16026044557881 Protein: CCND1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ACTL6A', 'AKT1', 'ARID1A', 'ARID2', 'AR', 'ATF2', 'BRD2', 'BTG2', 'CCNA1', 'CCNB1', 'CCNE1', 'CCNH', 'CDC25A', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CKS1B', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUL1', 'DNMT3A', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'AGO2', 'EP300', 'ESR1', 'FOS', 'FOXA1', 'FOXM1', 'GADD45A', 'GATA3', 'GLI1', 'GLI3', 'GSK3B', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC4', 'HIST1H2BA', 'HIST2H2BE', 'HNF1A', 'IFNAR1', 'JAK2', 'JUN', 'KAT2B', 'LEF1', 'LYN', 'MAML1', 'MYB', 'MYC', 'NOTCH1', 'PBRM1', 'PCNA', 'PRMT5', 'PSMA6', 'PSMC6', 'PSMD10', 'PSMD6', 'PSMD7', 'PSME3', 'PTK6', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RELA', 'RUNX1', 'RUNX3', 'SKP1', 'SKP2', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'SUV39H1', 'TCF7L2', 'TFDP1', 'TP53', 'WDR77', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.5816370010811139 Spearman Correlation: 0.5651662293506254 Coefficient of Determination: 0.33830160102663165 RMSE: 0.18515613714965792 NRMSE: 0.11662056406181216 MAPE: 486.9800805325136 Pearson Correlation: 0.20718830442196548 Spearman Correlation: 0.14077232883203034 Coefficient of Determination: -0.42752475872445683 RMSE: 0.32971317350780716 NRMSE: 0.21064973199154569 MAPE: 242.8304207110572 Predictor: ElasticNet Pearson Correlation: 0.4787012009573559 Spearman Correlation: 0.4703924793790899 Coefficient of Determination: 0.21786685053222887 RMSE: 0.20130215136546903 NRMSE: 0.1267901285935888 MAPE: 572.6315284969365 Pearson Correlation: 0.3477850996377702 Spearman Correlation: 0.28516315664783853 Coefficient of Determination: 0.11796102017789534 RMSE: 0.25917216938050286 NRMSE: 0.1655819433565268 MAPE: 242.80437173927876 Predictor: RandomForests Pearson Correlation: 0.5428070515055692 Spearman Correlation: 0.5335194938329567 Coefficient of Determination: 0.27263842597056254 RMSE: 0.194125794723969 NRMSE: 0.1222701014839067 MAPE: 489.3038396845265 Pearson Correlation: 0.3811792653654746 Spearman Correlation: 0.3078528704352158 Coefficient of Determination: 0.1401457542174439 RMSE: 0.25589210970831416 NRMSE: 0.1634863531697232 MAPE: 237.6147777677394 Protein: ERBB2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ADAM17', 'ADRB2', 'AREG', 'ARHGEF11', 'ARHGEF12', 'BTC', 'CBL', 'CCND1', 'CD44', 'CDC37', 'CDH1', 'CTNNB1', 'CTNND1', 'CUL5', 'DIAPH1', 'DOCK7', 'EGFR', 'EGF', 'ERBB2IP', 'ERBB3', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FYN', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IL6R', 'IL6', 'INS', 'JAK1', 'JAK2', 'KRAS', 'LRPPRC', 'MAP2K1', 'MAPK8', 'MATK', 'MEMO1', 'MUC1', 'MUC4', 'MYC', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'PGAP3', 'PGR', 'PIK3CA', 'PIK3CB', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PLXNB1', 'PRKACA', 'PTEN', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'RHOA', 'RHOB', 'RHOC', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'RPS27A', 'SEMA4D', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SRC', 'STAT1', 'STAT3', 'STUB1', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TGFA', 'TP53', 'UBA52', 'UBB', 'UBC', 'VEGFA', 'YES1', 'YY1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.8596579690283965 Spearman Correlation: 0.7133662857427328 Coefficient of Determination: 0.7390118237140273 RMSE: 0.5251336804664479 NRMSE: 0.08946516524974836 MAPE: 582.3846696775424 Pearson Correlation: 0.7137535356492071 Spearman Correlation: 0.5253307397847853 Coefficient of Determination: 0.4416546004644706 RMSE: 0.6483824015193036 NRMSE: 0.14346330379893873 MAPE: 449.4510032715517 Predictor: ElasticNet Pearson Correlation: 0.8497560050315929 Spearman Correlation: 0.7042921717966076 Coefficient of Determination: 0.7191281112820062 RMSE: 0.5447705157412682 NRMSE: 0.09281062332679153 MAPE: 543.4874284376233 Pearson Correlation: 0.742885524750526 Spearman Correlation: 0.5870821331936809 Coefficient of Determination: 0.5286909262021928 RMSE: 0.5957069241310661 NRMSE: 0.13180814783296074 MAPE: 412.0749916872927 Predictor: RandomForests Pearson Correlation: 0.8487699496163195 Spearman Correlation: 0.6734187187054156 Coefficient of Determination: 0.7161525210070727 RMSE: 0.5476485950410649 NRMSE: 0.09330095150366542 MAPE: 550.5553700816313 Pearson Correlation: 0.7915169947548313 Spearman Correlation: 0.6122250212787255 Coefficient of Determination: 0.6134685784680436 RMSE: 0.5394760258759528 NRMSE: 0.11936630730743507 MAPE: 275.42405340912677 Protein: ERBB3 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AKT2', 'ANGPT1', 'ANGPT2', 'AREG', 'AR', 'BDNF', 'BMP4', 'BTC', 'CBLB', 'CBL', 'CCND1', 'CDH1', 'CSF1', 'CSK', 'CTNNB1', 'DCN', 'DOCK7', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FGF10', 'FGF19', 'FGF1', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FIGF', 'FLNA', 'FOXO3', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IGF1', 'IGF2', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'JAK1', 'JAK2', 'KITLG', 'KRAS', 'LAMA1', 'LAMB1', 'LAMC2', 'MAP2K1', 'MAPK8', 'MET', 'MUC4', 'NGF', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NTF3', 'PA2G4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PRKACA', 'PTEN', 'PTPN11', 'RNF41', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SOX10', 'SRC', 'TGFA', 'VEGFA', 'VEGFB', 'VEGFC', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.5705228363124805 Spearman Correlation: 0.5611925319872195 Coefficient of Determination: 0.3254963067540376 RMSE: 0.38510739268551414 NRMSE: 0.10392943207893038 MAPE: 217.3351272821975 Pearson Correlation: 0.42946924097236133 Spearman Correlation: 0.38953353533086454 Coefficient of Determination: 0.06152210266539915 RMSE: 0.4039394419672267 NRMSE: 0.19543817710477188 MAPE: 298.63228587808123 Predictor: ElasticNet Pearson Correlation: 0.5254581290151246 Spearman Correlation: 0.5228552570034002 Coefficient of Determination: 0.26466501572287615 RMSE: 0.40209836188771875 NRMSE: 0.1085148069982266 MAPE: 207.81736929967755 Pearson Correlation: 0.5418093560458861 Spearman Correlation: 0.5185476128131274 Coefficient of Determination: 0.278829955634345 RMSE: 0.3540976758590517 NRMSE: 0.17132321604916284 MAPE: 212.93543148644196 Predictor: RandomForests Pearson Correlation: 0.5147210501453009 Spearman Correlation: 0.5335315400266676 Coefficient of Determination: 0.24995343811702808 RMSE: 0.4061007596974911 NRMSE: 0.10959493929177434 MAPE: 252.9138531022476 Pearson Correlation: 0.5426444411451047 Spearman Correlation: 0.5956059302485069 Coefficient of Determination: 0.2491498312802708 RMSE: 0.36131074577094974 NRMSE: 0.1748131184663301 MAPE: 231.47616816691362
Min-Max
scenario = Scenario.Top100InteractionPartners_Mutations
normalizeTechnique = NormalizeTechnique.MinMax
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.266811 | 0.102965 | 0.232299 | 0.000000 | 0.0 | 0.00000 | 0.165596 | 0.256402 | 0.0 | 0.00000 | ... | 0.362558 | 0.154626 | 0.343226 | 0.136973 | 0.283236 | 0.203583 | 0.106969 | 0.050188 | 0.019658 | 0.021305 |
| TCGA-A1-A0SH-01 | 0.074647 | 0.046655 | 0.060467 | 0.000000 | 0.0 | 0.00000 | 0.019946 | 0.108076 | 0.0 | 0.00000 | ... | 0.437102 | 0.171136 | 0.196632 | 0.028737 | 0.498917 | 0.208787 | 0.168174 | 0.119445 | 0.172767 | 0.000000 |
| TCGA-A1-A0SJ-01 | 0.122769 | 0.097168 | 0.035285 | 0.088368 | 0.0 | 0.00000 | 0.020200 | 0.129369 | 0.0 | 0.29443 | ... | 0.415293 | 0.914898 | 0.215818 | 0.074090 | 0.379839 | 0.104565 | 0.110857 | 0.079787 | 0.016343 | 0.000000 |
| TCGA-A1-A0SK-01 | 0.716855 | 1.000000 | 0.116251 | 0.076144 | 0.0 | 0.01449 | 0.000000 | 0.094313 | 0.0 | 0.00000 | ... | 0.334733 | 0.181185 | 0.763246 | 0.229344 | 0.511470 | 0.000000 | 0.246798 | 0.166438 | 0.018601 | 0.000000 |
| TCGA-A1-A0SQ-01 | 0.025757 | 0.011574 | 0.044865 | 0.000000 | 0.0 | 0.00000 | 0.022276 | 0.153652 | 0.0 | 0.00000 | ... | 0.537294 | 0.183640 | 0.239462 | 0.036770 | 0.323545 | 0.099038 | 0.071604 | 0.075950 | 0.006561 | 0.000000 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AATF', 'ABL1', 'AKT1', 'AR', 'ASF1A', 'ATF2', 'BGLAP', 'CASP3', 'CBX4', 'CCNA1', 'CCNA2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CEBPA', 'COL1A1', 'CREBBP', 'CTBP1', 'DNMT1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'ELF1', 'EP300', 'FOXM1', 'FZR1', 'GNB2L1', 'H1F0', 'H2AFV', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HIST1H2BA', 'HIST2H2AC', 'HIST2H2BE', 'HMGA1', 'HMGA2', 'HSP90AA1', 'ID2', 'JUN', 'MAPK14', 'MAPK1', 'MAPK3', 'MDM2', 'MEF2C', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NFYC', 'PCNA', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP2CA', 'PPP2CB', 'PRIM1', 'PRIM2', 'RAF1', 'RBBP4', 'RUNX2', 'SIRT1', 'SKP2', 'SMARCA2', 'SMC2', 'SMC4', 'SP100', 'SP1', 'SP3', 'SPI1', 'SUV39H1', 'TAF1', 'TBP', 'TERT', 'TFDP1', 'TP53BP1', 'TP53', 'TP73', 'YAP1', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.48625781171834803 Spearman Correlation: 0.45569906485102674 Coefficient of Determination: 0.23644665945711651 RMSE: 0.19582371842035737 NRMSE: 0.07416160515824932 MAPE: 356.69266626457755 Pearson Correlation: 0.18895593075451458 Spearman Correlation: 0.22351965661886644 Coefficient of Determination: -0.1423649693680895 RMSE: 0.29976646591225875 NRMSE: 0.14808913310851965 MAPE: 238.76208571234042 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: RandomForests Pearson Correlation: 0.5395872065276396 Spearman Correlation: 0.3993118263410426 Coefficient of Determination: 0.17191250113514878 RMSE: 0.20393121954380186 NRMSE: 0.07723204678803326 MAPE: 185.70358823305227 Pearson Correlation: 0.19312819479420687 Spearman Correlation: 0.3103209442981173 Coefficient of Determination: -0.006585797189794462 RMSE: 0.2813882823609106 NRMSE: 0.1390100346111413 MAPE: 126.80089897760412 Protein: CDH1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ACTA1', 'ACTN1', 'ADAM10', 'ADAM15', 'CA2', 'CASP3', 'CBLL1', 'CDC42', 'CDH17', 'CDH3', 'CDH5', 'CTBP1', 'CTNNA1', 'CTNNB1', 'CTNND1', 'CTTN', 'DLG1', 'EFNA1', 'EGFR', 'EGF', 'ENAH', 'EPCAM', 'EPHA2', 'EXOC3', 'EXOC4', 'FER', 'FLOT1', 'FLOT2', 'FMN1', 'FYN', 'GDNF', 'GNA12', 'GNA13', 'HGF', 'HGS', 'IGF1R', 'IGF1', 'IGF2', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'ITGA6', 'ITGAE', 'ITGB4', 'ITGB7', 'AJUBA', 'JUP', 'KIFC3', 'KLK7', 'KLRG1', 'LAMB1', 'LAMC2', 'LIMA1', 'MAPK1', 'MAPK3', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MLLT4', 'MMP3', 'MMP7', 'MMP9', 'MYO6', 'NCSTN', 'NUMB', 'PARD6A', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PLEKHA7', 'PLG', 'PRKCI', 'PRKCZ', 'PSEN1', 'PVRL1', 'PVRL2', 'RAB5A', 'RAB7A', 'RAC1', 'RAP1A', 'RET', 'RHOA', 'SKIL', 'SMAD3', 'SMAD4', 'SNAI1', 'SNAI2', 'SNAI3', 'SRC', 'STX4', 'TJP1', 'TWIST1', 'VASP', 'VCL', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 0.7465805631339264 Spearman Correlation: 0.7089224445362644 Coefficient of Determination: 0.5573825372493704 RMSE: 0.7507398575299529 NRMSE: 0.12618961180810395 MAPE: 483.9945187012062 Pearson Correlation: 0.583737990840189 Spearman Correlation: 0.5459028387474394 Coefficient of Determination: 0.24654060076167483 RMSE: 1.0071686712533092 NRMSE: 0.1631253719110669 MAPE: 472.69873879722803 Predictor: ElasticNet Pearson Correlation: 0.6207275190622559 Spearman Correlation: 0.6164862433693508 Coefficient of Determination: 0.28413513363022025 RMSE: 0.9547523272193759 NRMSE: 0.1604814561745711 MAPE: 388.95066069772383 Pearson Correlation: 0.6694563897704573 Spearman Correlation: 0.6405423861086723 Coefficient of Determination: 0.32959975041293943 RMSE: 0.9500344730205258 NRMSE: 0.1538716713129678 MAPE: 230.19800339224315 Predictor: RandomForests Pearson Correlation: 0.7426556664990703 Spearman Correlation: 0.6906466081325479 Coefficient of Determination: 0.546860378782499 RMSE: 0.7596109561461517 NRMSE: 0.12768072817745812 MAPE: 206.636462071981 Pearson Correlation: 0.7522562898289546 Spearman Correlation: 0.6985945239376057 Coefficient of Determination: 0.5607856505182343 RMSE: 0.7689720257119443 NRMSE: 0.12454601822291865 MAPE: 144.61405380512727 Protein: CDH2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ADAM10', 'AFP', 'AHSG', 'ALB', 'APLP2', 'APOA1', 'APOB', 'APOE', 'APP', 'AXIN1', 'BDNF', 'BMP4', 'BNIP2', 'CALU', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH17', 'CDH18', 'CDH1', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDON', 'CREBBP', 'CSF1', 'CST3', 'CTNNA1', 'CTNNA2', 'CTNNB1', 'CTNND1', 'CYR61', 'FAM20C', 'FBN1', 'FER', 'FGFR1', 'FN1', 'FSTL1', 'GAS6', 'GJA1', 'GOLM1', 'GPC3', 'GRIA2', 'HSP90B1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL6', 'ITIH2', 'JUP', 'KIF5B', 'KNG1', 'KTN1', 'LAMB1', 'LAMC1', 'LGALS1', 'LRP5', 'LTBP1', 'MAP2K6', 'MAPK11', 'MAPK14', 'MATN3', 'MEF2A', 'MEF2C', 'MEF2D', 'MET', 'MFGE8', 'MSLN', 'NTRK2', 'P4HB', 'PCSK9', 'PIK3CA', 'PIK3R1', 'PTPN11', 'PTPN1', 'RAC1', 'RHOA', 'ROBO1', 'SCG2', 'SDC2', 'SERPINA1', 'SLIT1', 'SNAI1', 'SNAI2', 'SPAG9', 'SPARCL1', 'SPP1', 'STC2', 'TCF3', 'TIMP1', 'TMEM132A', 'TNC', 'VCAN', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.503074142833867 Spearman Correlation: 0.49401859243815943 Coefficient of Determination: 0.25308359318803 RMSE: 0.3208023112585157 NRMSE: 0.1185141182467262 MAPE: 3299.146623357098 Pearson Correlation: -0.03884619634331011 Spearman Correlation: 0.06095502877768023 Coefficient of Determination: -0.6927044819124548 RMSE: 0.4880395206065596 NRMSE: 0.2518653664687824 MAPE: 207.33118972150635 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: RandomForests Pearson Correlation: 0.533289294515734 Spearman Correlation: 0.47801886118231335 Coefficient of Determination: 0.17443795966023257 RMSE: 0.3372689392832374 NRMSE: 0.12459739081789574 MAPE: 846.5144176700857 Pearson Correlation: 0.09229937519677632 Spearman Correlation: 0.16294995610184373 Coefficient of Determination: 0.003838602117242851 RMSE: 0.37439433952349765 NRMSE: 0.19321584327991828 MAPE: 107.14074793900335 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.5729780199091093 Spearman Correlation: 0.5407177293306035 Coefficient of Determination: 0.3283038112989639 RMSE: 0.1711261830213943 NRMSE: 0.12005821899126838 MAPE: 542.8036872086927 Pearson Correlation: 0.033830325008297635 Spearman Correlation: 0.3885523363574286 Coefficient of Determination: -2.4388972684261456 RMSE: 0.37937730193698715 NRMSE: 0.29037458721095677 MAPE: 346.6939889104461 Predictor: ElasticNet Pearson Correlation: 0.28483826861421474 Spearman Correlation: 0.3297863641063383 Coefficient of Determination: 0.00012478237763180466 RMSE: 0.2087867449849011 NRMSE: 0.14648000854864815 MAPE: 116.97048735641668 Pearson Correlation: 0.3793141473615411 Spearman Correlation: 0.4487074431762756 Coefficient of Determination: 7.74287154358122e-05 RMSE: 0.20457140523738854 NRMSE: 0.15657852235144662 MAPE: 108.72092392108104 Predictor: RandomForests Pearson Correlation: 0.5488348194628491 Spearman Correlation: 0.5498808348759677 Coefficient of Determination: 0.26165640371302934 RMSE: 0.17941521825494025 NRMSE: 0.12587361666872948 MAPE: 552.0017208748178 Pearson Correlation: 0.4711648997100896 Spearman Correlation: 0.5027704614183982 Coefficient of Determination: 0.20767549842787159 RMSE: 0.1821014003704093 NRMSE: 0.1393800279909142 MAPE: 358.2338803004399 Protein: PTEN Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AR', 'BCR', 'CD79A', 'CD79B', 'CDIPT', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'DLG1', 'EGFR', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'FOXO3', 'FOXO4', 'FRK', 'GRB2', 'HRAS', 'INPP4A', 'INPP4B', 'INPP5B', 'INPP5D', 'INPP5J', 'INPP5K', 'INPPL1', 'IPMK', 'IRS1', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'MAST2', 'MDM2', 'MDM4', 'MKRN1', 'MTOR', 'MYC', 'NEDD4', 'NOTCH1', 'OCRL', 'OTUD3', 'PARK7', 'PDGFB', 'PDGFRB', 'PI4K2A', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIKFYVE', 'PIP4K2A', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PML', 'PREX2', 'PSMA6', 'PSMA7', 'PSMB9', 'PSMC6', 'PSMD10', 'PSMD5', 'PSME3', 'PTK2', 'RICTOR', 'RNF146', 'ROCK1', 'ROCK2', 'RPS27A', 'RPS6KB1', 'SACM1L', 'SHC1', 'SLC9A3R1', 'SLC9A3R2', 'SOS1', 'STK11', 'STUB1', 'SYNJ1', 'SYNJ2', 'TNKS2', 'TNKS', 'TNRC6A', 'TNRC6B', 'TP53', 'UBB', 'UBC', 'USP13', 'USP7', 'WWP2', 'XIAP', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 0.6084447249063447 Spearman Correlation: 0.5776381482754656 Coefficient of Determination: 0.3702049832663573 RMSE: 0.4971675185134956 NRMSE: 0.07773708365467838 MAPE: 737.5979788028283 Pearson Correlation: -0.04288190174568854 Spearman Correlation: 0.15686274509803924 Coefficient of Determination: -1.355083193146244 RMSE: 0.7621980872261309 NRMSE: 0.2512023225977625 MAPE: 266.3494446662041 Predictor: ElasticNet Pearson Correlation: 0.40877867949873053 Spearman Correlation: 0.4400286009465868 Coefficient of Determination: 0.04930154015147181 RMSE: 0.6108358702391112 NRMSE: 0.09551026037668849 MAPE: 343.85283159986096 Pearson Correlation: 0.2302482916723174 Spearman Correlation: 0.2827382694371281 Coefficient of Determination: 0.02135224208287012 RMSE: 0.49133525876713097 NRMSE: 0.16193239033917703 MAPE: 158.8007981048717 Predictor: RandomForests Pearson Correlation: 0.5832693742551751 Spearman Correlation: 0.5373280768749423 Coefficient of Determination: 0.3039091264783117 RMSE: 0.5226802702709819 NRMSE: 0.08172625600359344 MAPE: 361.54939429879863 Pearson Correlation: 0.2936758845392045 Spearman Correlation: 0.3134667275215896 Coefficient of Determination: 0.07044760595945221 RMSE: 0.4788523960287934 NRMSE: 0.15781833630900843 MAPE: 185.36052712411103 Protein: BRCA2 Protein Interaction Partners Count: 100 x_train_column_count: 99 x_train columns: ['ATM', 'ATRIP', 'ATR', 'BARD1', 'BLM', 'BRCA1', 'BRIP1', 'SLX4', 'RHNO1', 'RMI2', 'CDK2', 'CDK4', 'CHEK1', 'CHEK2', 'DMC1', 'DNA2', 'EME1', 'EME2', 'EXO1', 'FANCD2', 'FANCE', 'FANCG', 'FANCI', 'GEN1', 'H2AFX', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HUS1', 'KAT5', 'SPIDR', 'MLH1', 'MLH3', 'MND1', 'MRE11A', 'MSH4', 'MSH5', 'MUS81', 'NBN', 'PALB2', 'PARP1', 'PCNA', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'PSMC3IP', 'RAD17', 'RAD1', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD9A', 'RAD9B', 'RBBP8', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SPO11', 'SYCP3', 'TEX15', 'TOP3A', 'TOPBP1', 'TP53', 'UBA52', 'UBB', 'UBC', 'WRN', 'XRCC2', 'XRCC3', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.5224903786308419 Spearman Correlation: 0.47863791039641596 Coefficient of Determination: 0.27299619576180056 RMSE: 0.16849226023559108 NRMSE: 0.10899580831096677 MAPE: 256.5611455369393 Pearson Correlation: 0.17292506886009082 Spearman Correlation: 0.18939150984248526 Coefficient of Determination: -0.21826325999552343 RMSE: 0.2039008213849776 NRMSE: 0.2040640726430921 MAPE: 243.5812159123567 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: RandomForests Pearson Correlation: 0.5295849578633959 Spearman Correlation: 0.4423018185215187 Coefficient of Determination: 0.1563190100621723 RMSE: 0.18151007917940512 NRMSE: 0.11741689362516988 MAPE: 150.74681234420754 Pearson Correlation: 0.25929612904848853 Spearman Correlation: 0.2569337832088819 Coefficient of Determination: 0.05061802888745981 RMSE: 0.1799985024195879 NRMSE: 0.18014261651279817 MAPE: 115.58269570345665 Protein: CDKN2A Protein Interaction Partners Count: 100 x_train_column_count: 100 x_train columns: ['ABL1', 'AKT1', 'ARF1', 'BMI1', 'BRCA1', 'CBX7', 'CCND1', 'CCND2', 'CCND3', 'CCNL1', 'CDC45', 'CDC6', 'CDC7', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPB', 'CTCF', 'DAXX', 'E2F1', 'E2F2', 'E2F3', 'EGFR', 'EGR1', 'AGO1', 'AGO3', 'AGO4', 'ERBB2', 'EZH2', 'FOXM1', 'GMNN', 'HDAC1', 'HIF1A', 'HRAS', 'HUWE1', 'IL6', 'KRAS', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAX', 'MCM10', 'MCM2', 'MCM5', 'MDM2', 'MDM4', 'MGMT', 'MLH1', 'MOV10', 'MRAS', 'MTAP', 'MYCN', 'MYC', 'NPM1', 'NRAS', 'ORC5', 'PIK3CA', 'PIK3R1', 'PTEN', 'RASSF1', 'RB1', 'RPS27A', 'RRAS2', 'RRAS', 'RUNX3', 'SMAD3', 'SMAD4', 'SMARCA4', 'SUMO1', 'SUMO2', 'SUMO3', 'TBX2', 'TERT', 'TFDP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TP53', 'TP63', 'TRIP12', 'TWIST1', 'UBA52', 'UBB', 'UBC', 'UBE2I', 'USP7', 'VEGFA', 'WRN', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 0.7137945166764523 Spearman Correlation: 0.6477957992494499 Coefficient of Determination: 0.5095026120373696 RMSE: 0.45012859992749266 NRMSE: 0.1017584717819583 MAPE: 191.87379450600258 Pearson Correlation: 0.5544144566798075 Spearman Correlation: 0.4688127987513413 Coefficient of Determination: 0.28800378904628454 RMSE: 0.630203618940211 NRMSE: 0.17018731270327062 MAPE: 732.5519835894212 Predictor: ElasticNet Pearson Correlation: 0.4890314634263145 Spearman Correlation: 0.3399246357913522 Coefficient of Determination: 0.08269516745131877 RMSE: 0.6155666729878583 NRMSE: 0.1391582848395746 MAPE: 187.20205076756304 Pearson Correlation: 0.609415243030755 Spearman Correlation: 0.3695737001268169 Coefficient of Determination: 0.08530136138988709 RMSE: 0.7143006871413536 NRMSE: 0.19289783611702774 MAPE: 379.0932186495355 Predictor: RandomForests Pearson Correlation: 0.6512682096034268 Spearman Correlation: 0.5862298214602163 Coefficient of Determination: 0.41559769744228703 RMSE: 0.49133105775668623 NRMSE: 0.11107291912663866 MAPE: 186.81586722629325 Pearson Correlation: 0.7138871852146856 Spearman Correlation: 0.5770326235678206 Coefficient of Determination: 0.4634281612235852 RMSE: 0.5470864888726946 NRMSE: 0.14774142286597208 MAPE: 327.45824804160657 Protein: TP53 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AKT1', 'APAF1', 'ATM', 'ATR', 'AURKA', 'AURKB', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2L1', 'BCL2', 'BCL6', 'BRCA1', 'CASP8', 'CCNA2', 'CCNE1', 'CCNG1', 'CDC25C', 'CDK2', 'CDK5', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CHEK1', 'CHEK2', 'COPS5', 'CREBBP', 'DDB2', 'DDX5', 'DYRK2', 'E2F4', 'EGR1', 'EHMT2', 'EP300', 'EZH2', 'FZR1', 'GADD45A', 'GLS2', 'GSK3B', 'HDAC1', 'HDAC2', 'HIF1A', 'HIPK2', 'HSP90AA1', 'HSPA1A', 'IGFBP3', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'MAPK14', 'MAPK1', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MCL1', 'MDM2', 'MDM4', 'MSH2', 'NGFR', 'NPM1', 'PLK3', 'PMAIP1', 'PPP1R13B', 'PPP1R13L', 'PRKDC', 'PRMT5', 'PTEN', 'RB1', 'RCHY1', 'DROSHA', 'RPA1', 'RRM2B', 'SETD7', 'SETD8', 'SFN', 'SIRT1', 'SMYD2', 'SNAI1', 'SNAI2', 'SP1', 'STAT3', 'STK11', 'SUMO1', 'SUMO2', 'TBP', 'TNFRSF10A', 'TNFRSF10B', 'TP53BP1', 'TP53BP2', 'TP53INP1', 'TP53RK', 'TXN', 'UBE2I', 'USP7', 'WRN', 'XRCC6', 'YY1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.6643682568503029 Spearman Correlation: 0.591699374815362 Coefficient of Determination: 0.4413851807103102 RMSE: 0.33843978817181203 NRMSE: 0.08133616634746745 MAPE: 748.897153066809 Pearson Correlation: 0.503928246772587 Spearman Correlation: 0.5015461906155497 Coefficient of Determination: 0.19791589921129182 RMSE: 0.3767194399287851 NRMSE: 0.13546673376561008 MAPE: 981.8009350977977 Predictor: ElasticNet Pearson Correlation: 0.40575309722507036 Spearman Correlation: 0.39482798505967054 Coefficient of Determination: 0.12897541998676676 RMSE: 0.4226106074697349 NRMSE: 0.10156467374903506 MAPE: 540.4787534665038 Pearson Correlation: 0.5067054809752353 Spearman Correlation: 0.4834650278021657 Coefficient of Determination: 0.18417731128827108 RMSE: 0.3799320820071863 NRMSE: 0.1366219864098624 MAPE: 566.6343883196054 Predictor: RandomForests Pearson Correlation: 0.6097534973256057 Spearman Correlation: 0.5139039652587687 Coefficient of Determination: 0.33750018110792934 RMSE: 0.36856837692133904 NRMSE: 0.08857687501113652 MAPE: 615.4124035147506 Pearson Correlation: 0.4836200045164307 Spearman Correlation: 0.46771331891245216 Coefficient of Determination: 0.23275960811854368 RMSE: 0.3684459670531218 NRMSE: 0.13249162754975793 MAPE: 330.3142319701158 Protein: CTNNB1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'AKT1', 'APC2', 'APC', 'AR', 'AXIN1', 'AXIN2', 'BCL9', 'BTRC', 'CASP3', 'CBY1', 'CCND1', 'CDC73', 'CDH11', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDH5', 'CDH8', 'CHD8', 'CREBBP', 'CSNK1A1', 'CSNK1E', 'CTBP1', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNBIP1', 'CTNND1', 'DVL1', 'DVL2', 'DVL3', 'EGFR', 'EGF', 'EP300', 'ERBB2', 'AMER1', 'FBXW11', 'FER', 'FGFR1', 'FOXO1', 'FOXO3', 'FYN', 'FZD1', 'FZD2', 'FZD5', 'GSK3A', 'GSK3B', 'HNF4A', 'IGF1R', 'IQGAP1', 'JUN', 'JUP', 'KDR', 'KLF4', 'LEF1', 'LRP5', 'LRP6', 'MAPK9', 'MEN1', 'MET', 'MMP7', 'MYC', 'NLK', 'NOTCH1', 'PIK3CA', 'PIK3R1', 'PITX2', 'PSEN1', 'PTPN11', 'PTPN1', 'PYGO2', 'RUVBL1', 'SKP1', 'SMAD4', 'SMAD7', 'SMARCA4', 'SOX17', 'SOX2', 'SOX6', 'SOX9', 'SRC', 'TBL1X', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TGFBR1', 'TGFBR2', 'TJP1', 'TLE1', 'VCL', 'VEGFA', 'WNT1', 'WNT3A', 'WNT8A', 'WNT8B', 'YWHAZ', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 0.6711039396421055 Spearman Correlation: 0.6511231739875518 Coefficient of Determination: 0.4503804978031546 RMSE: 0.5465590755337435 NRMSE: 0.11015560705680383 MAPE: 519.1657659772385 Pearson Correlation: 0.3946094676348556 Spearman Correlation: 0.4038484050336553 Coefficient of Determination: 0.006200638227220168 RMSE: 0.7486259379849933 NRMSE: 0.18573560710191866 MAPE: 421.8561758460579 Predictor: ElasticNet Pearson Correlation: 0.4580387527607384 Spearman Correlation: 0.445397099000848 Coefficient of Determination: 0.06152115347785836 RMSE: 0.7141974362491068 NRMSE: 0.14394208361027608 MAPE: 690.8694080175317 Pearson Correlation: 0.4302126924012697 Spearman Correlation: 0.40185347770949176 Coefficient of Determination: 0.04682592058604407 RMSE: 0.7331648328286401 NRMSE: 0.18189967568814572 MAPE: 327.57732259802935 Predictor: RandomForests Pearson Correlation: 0.6656992239056829 Spearman Correlation: 0.6133953454672096 Coefficient of Determination: 0.4349807211043826 RMSE: 0.5541631919467963 NRMSE: 0.11168816976979591 MAPE: 329.20271777914945 Pearson Correlation: 0.5336624031149049 Spearman Correlation: 0.4858586622262577 Coefficient of Determination: 0.26869688378404666 RMSE: 0.6421910157662638 NRMSE: 0.15932888794875796 MAPE: 230.86504621225313 Protein: CCNE1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['ABL1', 'BARD1', 'BRCA1', 'CABLES1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNH', 'CCT2', 'CCT3', 'CCT4', 'CCT6A', 'CCT7', 'CDC25A', 'CDC6', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDT1', 'CKS1B', 'CKS2', 'CUL1', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'EP400', 'FOXM1', 'HDAC1', 'IFNAR1', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'MNAT1', 'MYC', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PCNA', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB7', 'PSMC1', 'PSMC2', 'PSMC4', 'PSMC5', 'PSMD10', 'PSMD11', 'PSMD14', 'PSMD1', 'PSMD3', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSME3', 'PTK6', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RHOA', 'RPS27A', 'RRN3', 'SKP1', 'SKP2', 'STAT5A', 'STAT5B', 'TCP1', 'TFDP1', 'TP53', 'TP73', 'UBB', 'UBC', 'WEE1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.8774175459671832 Spearman Correlation: 0.7204934647632695 Coefficient of Determination: 0.7698615499710739 RMSE: 0.23203034435425016 NRMSE: 0.055995932223435615 MAPE: 55.513631606979985 Pearson Correlation: 0.8048281276095111 Spearman Correlation: 0.6018242122719735 Coefficient of Determination: 0.6373795512018188 RMSE: 0.3233946234518694 NRMSE: 0.11518953640315918 MAPE: 49.111252271399515 Predictor: ElasticNet Pearson Correlation: 0.6631121317330246 Spearman Correlation: 0.6117272177251797 Coefficient of Determination: 0.2791624383186172 RMSE: 0.4106472294944165 NRMSE: 0.099101583004179 MAPE: 92.6010822090089 Pearson Correlation: 0.7169778778597022 Spearman Correlation: 0.5839430299482978 Coefficient of Determination: 0.2945673153772531 RMSE: 0.45106012790388983 NRMSE: 0.16066255668882987 MAPE: 66.6203845709988 Predictor: RandomForests Pearson Correlation: 0.8568325247662703 Spearman Correlation: 0.7204752981992786 Coefficient of Determination: 0.7283520088609318 RMSE: 0.25208873649532704 NRMSE: 0.06083662825381351 MAPE: 54.930323127980664 Pearson Correlation: 0.837816825298056 Spearman Correlation: 0.7059538137469166 Coefficient of Determination: 0.6986948888904203 RMSE: 0.29478806689977877 NRMSE: 0.10500020192334061 MAPE: 44.001700036877104 Protein: CCND1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ACTL6A', 'AKT1', 'ARID1A', 'ARID2', 'AR', 'ATF2', 'BRD2', 'BTG2', 'CCNA1', 'CCNB1', 'CCNE1', 'CCNH', 'CDC25A', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CKS1B', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUL1', 'DNMT3A', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'AGO2', 'EP300', 'ESR1', 'FOS', 'FOXA1', 'FOXM1', 'GADD45A', 'GATA3', 'GLI1', 'GLI3', 'GSK3B', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC4', 'HIST1H2BA', 'HIST2H2BE', 'HNF1A', 'IFNAR1', 'JAK2', 'JUN', 'KAT2B', 'LEF1', 'LYN', 'MAML1', 'MYB', 'MYC', 'NOTCH1', 'PBRM1', 'PCNA', 'PRMT5', 'PSMA6', 'PSMC6', 'PSMD10', 'PSMD6', 'PSMD7', 'PSME3', 'PTK6', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RELA', 'RUNX1', 'RUNX3', 'SKP1', 'SKP2', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'SUV39H1', 'TCF7L2', 'TFDP1', 'TP53', 'WDR77', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 0.5636707126515218 Spearman Correlation: 0.5338794000240731 Coefficient of Determination: 0.3177246723010745 RMSE: 0.19732635215636038 NRMSE: 0.1186268964881752 MAPE: 303.90890385330385 Pearson Correlation: 0.47243933187366527 Spearman Correlation: 0.37750951126719345 Coefficient of Determination: -0.03747489524555747 RMSE: 0.23930914416114044 NRMSE: 0.17043839678732012 MAPE: 1816.1890371613786 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: RandomForests Pearson Correlation: 0.5396287154639029 Spearman Correlation: 0.502939768100025 Coefficient of Determination: 0.24994905002118484 RMSE: 0.20689530563231137 NRMSE: 0.12437947459589964 MAPE: 321.9495425031968 Pearson Correlation: 0.5113924341245587 Spearman Correlation: 0.5230886292665937 Coefficient of Determination: 0.2479354192270824 RMSE: 0.2037502091357217 NRMSE: 0.14511296303324717 MAPE: 1056.0884306207543 Protein: ERBB2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ADAM17', 'ADRB2', 'AREG', 'ARHGEF11', 'ARHGEF12', 'BTC', 'CBL', 'CCND1', 'CD44', 'CDC37', 'CDH1', 'CTNNB1', 'CTNND1', 'CUL5', 'DIAPH1', 'DOCK7', 'EGFR', 'EGF', 'ERBB2IP', 'ERBB3', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FYN', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IL6R', 'IL6', 'INS', 'JAK1', 'JAK2', 'KRAS', 'LRPPRC', 'MAP2K1', 'MAPK8', 'MATK', 'MEMO1', 'MUC1', 'MUC4', 'MYC', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'PGAP3', 'PGR', 'PIK3CA', 'PIK3CB', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PLXNB1', 'PRKACA', 'PTEN', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'RHOA', 'RHOB', 'RHOC', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'RPS27A', 'SEMA4D', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SRC', 'STAT1', 'STAT3', 'STUB1', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TGFA', 'TP53', 'UBA52', 'UBB', 'UBC', 'VEGFA', 'YES1', 'YY1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 0.855565678612372 Spearman Correlation: 0.7304635390805553 Coefficient of Determination: 0.7319926304194486 RMSE: 0.5276014401097882 NRMSE: 0.08988558872000071 MAPE: 539.7970442294128 Pearson Correlation: 0.7211630034473997 Spearman Correlation: 0.5739196175982831 Coefficient of Determination: 0.4888452610751224 RMSE: 0.6484893794185128 NRMSE: 0.12024650091201795 MAPE: 331.13159766071317 Predictor: ElasticNet Pearson Correlation: 0.8039861952737962 Spearman Correlation: 0.618944679429818 Coefficient of Determination: 0.2793901260743271 RMSE: 0.8651326617847814 NRMSE: 0.14738958750613854 MAPE: 640.6286301392 Pearson Correlation: 0.8160834088938104 Spearman Correlation: 0.6532338308457711 Coefficient of Determination: 0.24686427434754388 RMSE: 0.7871605068963934 NRMSE: 0.14595967122128564 MAPE: 457.11261766952435 Predictor: RandomForests Pearson Correlation: 0.8433007690847746 Spearman Correlation: 0.6562328792592249 Coefficient of Determination: 0.7083630081806649 RMSE: 0.5503689305629248 NRMSE: 0.09376440543178098 MAPE: 460.06554811053206 Pearson Correlation: 0.8169954335116215 Spearman Correlation: 0.714499680796803 Coefficient of Determination: 0.6561677185767817 RMSE: 0.5318632665691463 NRMSE: 0.09862103960117677 MAPE: 307.5359921183597 Protein: ERBB3 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AKT2', 'ANGPT1', 'ANGPT2', 'AREG', 'AR', 'BDNF', 'BMP4', 'BTC', 'CBLB', 'CBL', 'CCND1', 'CDH1', 'CSF1', 'CSK', 'CTNNB1', 'DCN', 'DOCK7', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FGF10', 'FGF19', 'FGF1', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FIGF', 'FLNA', 'FOXO3', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IGF1', 'IGF2', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'JAK1', 'JAK2', 'KITLG', 'KRAS', 'LAMA1', 'LAMB1', 'LAMC2', 'MAP2K1', 'MAPK8', 'MET', 'MUC4', 'NGF', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NTF3', 'PA2G4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PRKACA', 'PTEN', 'PTPN11', 'RNF41', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SOX10', 'SRC', 'TGFA', 'VEGFA', 'VEGFB', 'VEGFC', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.5846385774030327 Spearman Correlation: 0.5814912548696802 Coefficient of Determination: 0.3418022661878414 RMSE: 0.37249594530387053 NRMSE: 0.10052596439962286 MAPE: 197.49566837967868 Pearson Correlation: 0.31201395918673225 Spearman Correlation: 0.3620139035388307 Coefficient of Determination: -0.32057965389539866 RMSE: 0.5349581227215469 NRMSE: 0.21465641159538185 MAPE: 299.0531773906636 Predictor: ElasticNet Pearson Correlation: 0.42196016247633317 Spearman Correlation: 0.4519398805103739 Coefficient of Determination: 0.05542345010660765 RMSE: 0.4462332608908069 NRMSE: 0.12042554949596324 MAPE: 211.7213854853912 Pearson Correlation: 0.4309908855346549 Spearman Correlation: 0.4528514935759556 Coefficient of Determination: 0.053145269933072226 RMSE: 0.4529801401167718 NRMSE: 0.18176206187274163 MAPE: 245.20545752528608 Predictor: RandomForests Pearson Correlation: 0.5491289717277127 Spearman Correlation: 0.5567681894241043 Coefficient of Determination: 0.2845656695305143 RMSE: 0.38835441470699494 NRMSE: 0.10480571012772871 MAPE: 239.9856680316148 Pearson Correlation: 0.38648227930029155 Spearman Correlation: 0.39234560614965885 Coefficient of Determination: 0.13952978922040327 RMSE: 0.4318226369637922 NRMSE: 0.17327243714841428 MAPE: 281.07626847574466 Fold: 2 Protein: RB1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AATF', 'ABL1', 'AKT1', 'AR', 'ASF1A', 'ATF2', 'BGLAP', 'CASP3', 'CBX4', 'CCNA1', 'CCNA2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CEBPA', 'COL1A1', 'CREBBP', 'CTBP1', 'DNMT1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'ELF1', 'EP300', 'FOXM1', 'FZR1', 'GNB2L1', 'H1F0', 'H2AFV', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HIST1H2BA', 'HIST2H2AC', 'HIST2H2BE', 'HMGA1', 'HMGA2', 'HSP90AA1', 'ID2', 'JUN', 'MAPK14', 'MAPK1', 'MAPK3', 'MDM2', 'MEF2C', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NFYC', 'PCNA', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP2CA', 'PPP2CB', 'PRIM1', 'PRIM2', 'RAF1', 'RBBP4', 'RUNX2', 'SIRT1', 'SKP2', 'SMARCA2', 'SMC2', 'SMC4', 'SP100', 'SP1', 'SP3', 'SPI1', 'SUV39H1', 'TAF1', 'TBP', 'TERT', 'TFDP1', 'TP53BP1', 'TP53', 'TP73', 'YAP1', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.4851511443137712 Spearman Correlation: 0.4992861387234251 Coefficient of Determination: 0.2353716328289619 RMSE: 0.2055270950867916 NRMSE: 0.07516350756538605 MAPE: 331.0357252061805 Pearson Correlation: 0.07001121464371021 Spearman Correlation: 0.12819237147595358 Coefficient of Determination: -0.4021783209687544 RMSE: 0.289999713238955 NRMSE: 0.16614895740793334 MAPE: 600.3215095911273 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: RandomForests Pearson Correlation: 0.5145515038742902 Spearman Correlation: 0.44009892078456364 Coefficient of Determination: 0.18599802934655563 RMSE: 0.21205895119023704 NRMSE: 0.07755227881445181 MAPE: 148.26230932920876 Pearson Correlation: 0.08824190881128072 Spearman Correlation: 0.144200741635974 Coefficient of Determination: -0.030911896992970034 RMSE: 0.2486604527794585 NRMSE: 0.14246453734886647 MAPE: 222.7265029350453 Protein: CDH1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ACTA1', 'ACTN1', 'ADAM10', 'ADAM15', 'CA2', 'CASP3', 'CBLL1', 'CDC42', 'CDH17', 'CDH3', 'CDH5', 'CTBP1', 'CTNNA1', 'CTNNB1', 'CTNND1', 'CTTN', 'DLG1', 'EFNA1', 'EGFR', 'EGF', 'ENAH', 'EPCAM', 'EPHA2', 'EXOC3', 'EXOC4', 'FER', 'FLOT1', 'FLOT2', 'FMN1', 'FYN', 'GDNF', 'GNA12', 'GNA13', 'HGF', 'HGS', 'IGF1R', 'IGF1', 'IGF2', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'ITGA6', 'ITGAE', 'ITGB4', 'ITGB7', 'AJUBA', 'JUP', 'KIFC3', 'KLK7', 'KLRG1', 'LAMB1', 'LAMC2', 'LIMA1', 'MAPK1', 'MAPK3', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MLLT4', 'MMP3', 'MMP7', 'MMP9', 'MYO6', 'NCSTN', 'NUMB', 'PARD6A', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PLEKHA7', 'PLG', 'PRKCI', 'PRKCZ', 'PSEN1', 'PVRL1', 'PVRL2', 'RAB5A', 'RAB7A', 'RAC1', 'RAP1A', 'RET', 'RHOA', 'SKIL', 'SMAD3', 'SMAD4', 'SNAI1', 'SNAI2', 'SNAI3', 'SRC', 'STX4', 'TJP1', 'TWIST1', 'VASP', 'VCL', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.7349167752386903 Spearman Correlation: 0.6765257583652421 Coefficient of Determination: 0.5401026665272355 RMSE: 0.7599412695880011 NRMSE: 0.12191245200737966 MAPE: 482.1119431662003 Pearson Correlation: 0.5693822176733242 Spearman Correlation: 0.5928397229538582 Coefficient of Determination: 0.2184119550545931 RMSE: 1.0172339438898579 NRMSE: 0.18064889786713867 MAPE: 301.554095991047 Predictor: ElasticNet Pearson Correlation: 0.6319039985557635 Spearman Correlation: 0.6087825550034297 Coefficient of Determination: 0.28676354111339264 RMSE: 0.9463817393411219 NRMSE: 0.15182188807910835 MAPE: 340.80976453717284 Pearson Correlation: 0.616398528023918 Spearman Correlation: 0.7256804214223004 Coefficient of Determination: 0.26765923178331086 RMSE: 0.9846649868180949 NRMSE: 0.174865030512892 MAPE: 165.3921870564458 Predictor: RandomForests Pearson Correlation: 0.7657638215665736 Spearman Correlation: 0.6800217599102509 Coefficient of Determination: 0.5819542149538295 RMSE: 0.7245385687012473 NRMSE: 0.11623302618131826 MAPE: 184.24380781842135 Pearson Correlation: 0.6576120370348326 Spearman Correlation: 0.6605306799336651 Coefficient of Determination: 0.39849349648966426 RMSE: 0.8923845719810481 NRMSE: 0.15847710388581923 MAPE: 209.07905470487273 Protein: CDH2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ADAM10', 'AFP', 'AHSG', 'ALB', 'APLP2', 'APOA1', 'APOB', 'APOE', 'APP', 'AXIN1', 'BDNF', 'BMP4', 'BNIP2', 'CALU', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH17', 'CDH18', 'CDH1', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDON', 'CREBBP', 'CSF1', 'CST3', 'CTNNA1', 'CTNNA2', 'CTNNB1', 'CTNND1', 'CYR61', 'FAM20C', 'FBN1', 'FER', 'FGFR1', 'FN1', 'FSTL1', 'GAS6', 'GJA1', 'GOLM1', 'GPC3', 'GRIA2', 'HSP90B1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL6', 'ITIH2', 'JUP', 'KIF5B', 'KNG1', 'KTN1', 'LAMB1', 'LAMC1', 'LGALS1', 'LRP5', 'LTBP1', 'MAP2K6', 'MAPK11', 'MAPK14', 'MATN3', 'MEF2A', 'MEF2C', 'MEF2D', 'MET', 'MFGE8', 'MSLN', 'NTRK2', 'P4HB', 'PCSK9', 'PIK3CA', 'PIK3R1', 'PTPN11', 'PTPN1', 'RAC1', 'RHOA', 'ROBO1', 'SCG2', 'SDC2', 'SERPINA1', 'SLIT1', 'SNAI1', 'SNAI2', 'SPAG9', 'SPARCL1', 'SPP1', 'STC2', 'TCF3', 'TIMP1', 'TMEM132A', 'TNC', 'VCAN', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.46156028024810203 Spearman Correlation: 0.44959855956861483 Coefficient of Determination: 0.21303789230270642 RMSE: 0.3265432464956123 NRMSE: 0.1183213444798943 MAPE: 1499.05050006347 Pearson Correlation: 0.2685249617919647 Spearman Correlation: 0.18965466783728419 Coefficient of Determination: -0.0959496180168049 RMSE: 0.40522520494811265 NRMSE: 0.2134820405696606 MAPE: 474.728252927226 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: RandomForests Pearson Correlation: 0.4798893716480286 Spearman Correlation: 0.43220841929355114 Coefficient of Determination: 0.14899119188768672 RMSE: 0.3395711793687041 NRMSE: 0.12304195208663822 MAPE: 686.8566268307792 Pearson Correlation: 0.15574560285587463 Spearman Correlation: 0.3593795727246123 Coefficient of Determination: 0.005663454025589321 RMSE: 0.38598271505547616 NRMSE: 0.2033446504030072 MAPE: 213.64948699623926 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.5750222934418499 Spearman Correlation: 0.5464477708979472 Coefficient of Determination: 0.33065063795512495 RMSE: 0.16993269557651747 NRMSE: 0.12789106558632488 MAPE: 280.55992040683975 Pearson Correlation: 0.15129344217314186 Spearman Correlation: 0.33341137450004876 Coefficient of Determination: -0.454023866366031 RMSE: 0.23866673811947609 NRMSE: 0.19638503918330957 MAPE: 1617.3596664548618 Predictor: ElasticNet Pearson Correlation: 0.3814299259959926 Spearman Correlation: 0.4154524392424565 Coefficient of Determination: 0.014565408672729374 RMSE: 0.20618849143367712 NRMSE: 0.15517711757368097 MAPE: 119.40599335492294 Pearson Correlation: 0.18947905463115441 Spearman Correlation: 0.2469076187689006 Coefficient of Determination: -0.1359977624859552 RMSE: 0.21095745042217207 NRMSE: 0.1735846707991213 MAPE: 297.60223372027184 Predictor: RandomForests Pearson Correlation: 0.5643420869215559 Spearman Correlation: 0.5595064484259596 Coefficient of Determination: 0.2915569262179636 RMSE: 0.17482478344760996 NRMSE: 0.1315728428255627 MAPE: 361.8509709984862 Pearson Correlation: 0.26611478629025903 Spearman Correlation: 0.37114427860696525 Coefficient of Determination: -0.07708413457356866 RMSE: 0.20541442796788412 NRMSE: 0.1690236385813249 MAPE: 1459.15447534378 Protein: PTEN Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AR', 'BCR', 'CD79A', 'CD79B', 'CDIPT', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'DLG1', 'EGFR', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'FOXO3', 'FOXO4', 'FRK', 'GRB2', 'HRAS', 'INPP4A', 'INPP4B', 'INPP5B', 'INPP5D', 'INPP5J', 'INPP5K', 'INPPL1', 'IPMK', 'IRS1', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'MAST2', 'MDM2', 'MDM4', 'MKRN1', 'MTOR', 'MYC', 'NEDD4', 'NOTCH1', 'OCRL', 'OTUD3', 'PARK7', 'PDGFB', 'PDGFRB', 'PI4K2A', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIKFYVE', 'PIP4K2A', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PML', 'PREX2', 'PSMA6', 'PSMA7', 'PSMB9', 'PSMC6', 'PSMD10', 'PSMD5', 'PSME3', 'PTK2', 'RICTOR', 'RNF146', 'ROCK1', 'ROCK2', 'RPS27A', 'RPS6KB1', 'SACM1L', 'SHC1', 'SLC9A3R1', 'SLC9A3R2', 'SOS1', 'STK11', 'STUB1', 'SYNJ1', 'SYNJ2', 'TNKS2', 'TNKS', 'TNRC6A', 'TNRC6B', 'TP53', 'UBB', 'UBC', 'USP13', 'USP7', 'WWP2', 'XIAP', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.5964416558096522 Spearman Correlation: 0.5860208262750544 Coefficient of Determination: 0.35574264878495987 RMSE: 0.5006566468385097 NRMSE: 0.07828264355226483 MAPE: 483.7079598800731 Pearson Correlation: 0.306657006641787 Spearman Correlation: 0.25554580040971614 Coefficient of Determination: -0.26303662784338133 RMSE: 0.5749950618438693 NRMSE: 0.19284782058085234 MAPE: 2320.510740758206 Predictor: ElasticNet Pearson Correlation: 0.41547593720354425 Spearman Correlation: 0.4252739438774229 Coefficient of Determination: 0.04196161828095479 RMSE: 0.6105226058569547 NRMSE: 0.09546127837650766 MAPE: 242.82674189771583 Pearson Correlation: 0.3481536039913498 Spearman Correlation: 0.3256657887035412 Coefficient of Determination: 0.04583399940974653 RMSE: 0.4997676157707621 NRMSE: 0.16761725777125105 MAPE: 475.9417707855634 Predictor: RandomForests Pearson Correlation: 0.5753336243669441 Spearman Correlation: 0.524772713757397 Coefficient of Determination: 0.30205576568971204 RMSE: 0.5210995005782082 NRMSE: 0.0814790869483556 MAPE: 266.8419485584841 Pearson Correlation: 0.2937978053660253 Spearman Correlation: 0.3148969899254314 Coefficient of Determination: 0.06599378271861733 RMSE: 0.49445984215507816 NRMSE: 0.1658370814847995 MAPE: 485.3068733725973 Protein: BRCA2 Protein Interaction Partners Count: 100 x_train_column_count: 99 x_train columns: ['ATM', 'ATRIP', 'ATR', 'BARD1', 'BLM', 'BRCA1', 'BRIP1', 'SLX4', 'RHNO1', 'RMI2', 'CDK2', 'CDK4', 'CHEK1', 'CHEK2', 'DMC1', 'DNA2', 'EME1', 'EME2', 'EXO1', 'FANCD2', 'FANCE', 'FANCG', 'FANCI', 'GEN1', 'H2AFX', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HUS1', 'KAT5', 'SPIDR', 'MLH1', 'MLH3', 'MND1', 'MRE11A', 'MSH4', 'MSH5', 'MUS81', 'NBN', 'PALB2', 'PARP1', 'PCNA', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'PSMC3IP', 'RAD17', 'RAD1', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD9A', 'RAD9B', 'RBBP8', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SPO11', 'SYCP3', 'TEX15', 'TOP3A', 'TOPBP1', 'TP53', 'UBA52', 'UBB', 'UBC', 'WRN', 'XRCC2', 'XRCC3', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.5303131589227361 Spearman Correlation: 0.48286116737715845 Coefficient of Determination: 0.2812320465266114 RMSE: 0.1655963811106799 NRMSE: 0.10668151464691893 MAPE: 262.1609769900131 Pearson Correlation: 0.14813065706504217 Spearman Correlation: 0.15685786752511952 Coefficient of Determination: -0.2805010738361835 RMSE: 0.21860977061655468 NRMSE: 0.14797626164537014 MAPE: 532.6878069544792 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: RandomForests Pearson Correlation: 0.5464276865949703 Spearman Correlation: 0.4667890971397747 Coefficient of Determination: 0.16976237956047002 RMSE: 0.1779744637630843 NRMSE: 0.11465579884882222 MAPE: 166.15437071332846 Pearson Correlation: 0.16705348570371462 Spearman Correlation: 0.21473027021753976 Coefficient of Determination: 0.00883631884128544 RMSE: 0.19233232652571014 NRMSE: 0.1301891429306317 MAPE: 127.59241320169126 Protein: CDKN2A Protein Interaction Partners Count: 100 x_train_column_count: 100 x_train columns: ['ABL1', 'AKT1', 'ARF1', 'BMI1', 'BRCA1', 'CBX7', 'CCND1', 'CCND2', 'CCND3', 'CCNL1', 'CDC45', 'CDC6', 'CDC7', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPB', 'CTCF', 'DAXX', 'E2F1', 'E2F2', 'E2F3', 'EGFR', 'EGR1', 'AGO1', 'AGO3', 'AGO4', 'ERBB2', 'EZH2', 'FOXM1', 'GMNN', 'HDAC1', 'HIF1A', 'HRAS', 'HUWE1', 'IL6', 'KRAS', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAX', 'MCM10', 'MCM2', 'MCM5', 'MDM2', 'MDM4', 'MGMT', 'MLH1', 'MOV10', 'MRAS', 'MTAP', 'MYCN', 'MYC', 'NPM1', 'NRAS', 'ORC5', 'PIK3CA', 'PIK3R1', 'PTEN', 'RASSF1', 'RB1', 'RPS27A', 'RRAS2', 'RRAS', 'RUNX3', 'SMAD3', 'SMAD4', 'SMARCA4', 'SUMO1', 'SUMO2', 'SUMO3', 'TBX2', 'TERT', 'TFDP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TP53', 'TP63', 'TRIP12', 'TWIST1', 'UBA52', 'UBB', 'UBC', 'UBE2I', 'USP7', 'VEGFA', 'WRN', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.7156411285791774 Spearman Correlation: 0.648686950907236 Coefficient of Determination: 0.5121422249140785 RMSE: 0.4633253661861893 NRMSE: 0.10474180313918599 MAPE: 236.4529319610052 Pearson Correlation: 0.5329176555029483 Spearman Correlation: 0.5312896302799728 Coefficient of Determination: -0.7956323076018701 RMSE: 0.902407416028701 NRMSE: 0.24378847418108412 MAPE: 241.28533353845478 Predictor: ElasticNet Pearson Correlation: 0.5119336531228856 Spearman Correlation: 0.321541035244537 Coefficient of Determination: 0.09894065959040566 RMSE: 0.6296745764499471 NRMSE: 0.14234759273198755 MAPE: 261.97182121317604 Pearson Correlation: 0.4970300769814736 Spearman Correlation: 0.3353672812408546 Coefficient of Determination: 0.09330685595115862 RMSE: 0.6412451837428671 NRMSE: 0.1732345968615915 MAPE: 213.0148793453941 Predictor: RandomForests Pearson Correlation: 0.6584895094447617 Spearman Correlation: 0.5891147738605967 Coefficient of Determination: 0.4207427885264894 RMSE: 0.5048649102539812 NRMSE: 0.11413245399660475 MAPE: 178.6375203118971 Pearson Correlation: 0.7144224068256434 Spearman Correlation: 0.6207392720481201 Coefficient of Determination: 0.4728247406407804 RMSE: 0.488957892315898 NRMSE: 0.13209366012424303 MAPE: 188.25709460942753 Protein: TP53 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AKT1', 'APAF1', 'ATM', 'ATR', 'AURKA', 'AURKB', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2L1', 'BCL2', 'BCL6', 'BRCA1', 'CASP8', 'CCNA2', 'CCNE1', 'CCNG1', 'CDC25C', 'CDK2', 'CDK5', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CHEK1', 'CHEK2', 'COPS5', 'CREBBP', 'DDB2', 'DDX5', 'DYRK2', 'E2F4', 'EGR1', 'EHMT2', 'EP300', 'EZH2', 'FZR1', 'GADD45A', 'GLS2', 'GSK3B', 'HDAC1', 'HDAC2', 'HIF1A', 'HIPK2', 'HSP90AA1', 'HSPA1A', 'IGFBP3', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'MAPK14', 'MAPK1', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MCL1', 'MDM2', 'MDM4', 'MSH2', 'NGFR', 'NPM1', 'PLK3', 'PMAIP1', 'PPP1R13B', 'PPP1R13L', 'PRKDC', 'PRMT5', 'PTEN', 'RB1', 'RCHY1', 'DROSHA', 'RPA1', 'RRM2B', 'SETD7', 'SETD8', 'SFN', 'SIRT1', 'SMYD2', 'SNAI1', 'SNAI2', 'SP1', 'STAT3', 'STK11', 'SUMO1', 'SUMO2', 'TBP', 'TNFRSF10A', 'TNFRSF10B', 'TP53BP1', 'TP53BP2', 'TP53INP1', 'TP53RK', 'TXN', 'UBE2I', 'USP7', 'WRN', 'XRCC6', 'YY1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 0.6525223438001393 Spearman Correlation: 0.5866541454218444 Coefficient of Determination: 0.4257854091584268 RMSE: 0.3450293558365917 NRMSE: 0.0924144518110598 MAPE: 471.44946086361364 Pearson Correlation: 0.45384377011628857 Spearman Correlation: 0.46975417032484645 Coefficient of Determination: 0.041356077364619215 RMSE: 0.40082885749664593 NRMSE: 0.13200357566166504 MAPE: 2630.5630216463132 Predictor: ElasticNet Pearson Correlation: 0.4181062177191798 Spearman Correlation: 0.4223187353077774 Coefficient of Determination: 0.14401433089375215 RMSE: 0.4212619001564533 NRMSE: 0.1128329717842382 MAPE: 329.07493974587817 Pearson Correlation: 0.37189513374824573 Spearman Correlation: 0.3812018339674178 Coefficient of Determination: 0.11930071647318263 RMSE: 0.38418830517145947 NRMSE: 0.12652340035286003 MAPE: 1596.6123545209302 Predictor: RandomForests Pearson Correlation: 0.6211946355828277 Spearman Correlation: 0.5590174471190383 Coefficient of Determination: 0.3494121420579812 RMSE: 0.3672585475468717 NRMSE: 0.09836843378783225 MAPE: 362.91345345811743 Pearson Correlation: 0.5917300916878822 Spearman Correlation: 0.5117451955906741 Coefficient of Determination: 0.31763080129622556 RMSE: 0.3381738537731816 NRMSE: 0.11136962087046981 MAPE: 1968.2726048276872 Protein: CTNNB1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'AKT1', 'APC2', 'APC', 'AR', 'AXIN1', 'AXIN2', 'BCL9', 'BTRC', 'CASP3', 'CBY1', 'CCND1', 'CDC73', 'CDH11', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDH5', 'CDH8', 'CHD8', 'CREBBP', 'CSNK1A1', 'CSNK1E', 'CTBP1', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNBIP1', 'CTNND1', 'DVL1', 'DVL2', 'DVL3', 'EGFR', 'EGF', 'EP300', 'ERBB2', 'AMER1', 'FBXW11', 'FER', 'FGFR1', 'FOXO1', 'FOXO3', 'FYN', 'FZD1', 'FZD2', 'FZD5', 'GSK3A', 'GSK3B', 'HNF4A', 'IGF1R', 'IQGAP1', 'JUN', 'JUP', 'KDR', 'KLF4', 'LEF1', 'LRP5', 'LRP6', 'MAPK9', 'MEN1', 'MET', 'MMP7', 'MYC', 'NLK', 'NOTCH1', 'PIK3CA', 'PIK3R1', 'PITX2', 'PSEN1', 'PTPN11', 'PTPN1', 'PYGO2', 'RUVBL1', 'SKP1', 'SMAD4', 'SMAD7', 'SMARCA4', 'SOX17', 'SOX2', 'SOX6', 'SOX9', 'SRC', 'TBL1X', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TGFBR1', 'TGFBR2', 'TJP1', 'TLE1', 'VCL', 'VEGFA', 'WNT1', 'WNT3A', 'WNT8A', 'WNT8B', 'YWHAZ', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.6518527799980557 Spearman Correlation: 0.6309058981105952 Coefficient of Determination: 0.4249120467911932 RMSE: 0.549788067319096 NRMSE: 0.10814084723034935 MAPE: 341.5427138389479 Pearson Correlation: 0.5252194586548198 Spearman Correlation: 0.5553409423470882 Coefficient of Determination: 0.1808687711028265 RMSE: 0.6937584361651111 NRMSE: 0.17265833009758622 MAPE: 421.5513120537024 Predictor: ElasticNet Pearson Correlation: 0.45571085549162615 Spearman Correlation: 0.43066287761705224 Coefficient of Determination: 0.06312488199320754 RMSE: 0.7017283572298841 NRMSE: 0.13802682085560272 MAPE: 648.5184559031338 Pearson Correlation: 0.42549954930839645 Spearman Correlation: 0.46580333625987713 Coefficient of Determination: -0.055765515671800436 RMSE: 0.7876173452358901 NRMSE: 0.19601735776508553 MAPE: 272.79347244866483 Predictor: RandomForests Pearson Correlation: 0.6609651932376164 Spearman Correlation: 0.5862416152305238 Coefficient of Determination: 0.428352896454669 RMSE: 0.5481408616864913 NRMSE: 0.10781684926956951 MAPE: 409.6430696817524 Pearson Correlation: 0.5587501084007931 Spearman Correlation: 0.5378433053404952 Coefficient of Determination: 0.26870075000231564 RMSE: 0.6555096651182158 NRMSE: 0.16313921134820336 MAPE: 194.44824700933106 Protein: CCNE1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['ABL1', 'BARD1', 'BRCA1', 'CABLES1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNH', 'CCT2', 'CCT3', 'CCT4', 'CCT6A', 'CCT7', 'CDC25A', 'CDC6', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDT1', 'CKS1B', 'CKS2', 'CUL1', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'EP400', 'FOXM1', 'HDAC1', 'IFNAR1', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'MNAT1', 'MYC', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PCNA', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB7', 'PSMC1', 'PSMC2', 'PSMC4', 'PSMC5', 'PSMD10', 'PSMD11', 'PSMD14', 'PSMD1', 'PSMD3', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSME3', 'PTK6', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RHOA', 'RPS27A', 'RRN3', 'SKP1', 'SKP2', 'STAT5A', 'STAT5B', 'TCP1', 'TFDP1', 'TP53', 'TP73', 'UBB', 'UBC', 'WEE1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.8839824869271016 Spearman Correlation: 0.7060161780016073 Coefficient of Determination: 0.781425037193823 RMSE: 0.2397428062050311 NRMSE: 0.05785718227792338 MAPE: 57.100524501823315 Pearson Correlation: 0.7248083286506806 Spearman Correlation: 0.6715296068676226 Coefficient of Determination: 0.4140416847807016 RMSE: 0.3201795056323541 NRMSE: 0.17401154660207616 MAPE: 54.279468913458416 Predictor: ElasticNet Pearson Correlation: 0.6722304742916165 Spearman Correlation: 0.5903362810139923 Coefficient of Determination: 0.3042673741051414 RMSE: 0.4277268986392348 NRMSE: 0.10322342318199551 MAPE: 89.85364473403598 Pearson Correlation: 0.7038030106627187 Spearman Correlation: 0.6306116476441324 Coefficient of Determination: 0.3738361704716555 RMSE: 0.33098183343875437 NRMSE: 0.1798824088385015 MAPE: 59.2664680870166 Predictor: RandomForests Pearson Correlation: 0.8593755817851706 Spearman Correlation: 0.7111903038157923 Coefficient of Determination: 0.7339078258100613 RMSE: 0.26452177540838345 NRMSE: 0.06383709617211271 MAPE: 68.13230141279159 Pearson Correlation: 0.837300844103151 Spearman Correlation: 0.7371394425134778 Coefficient of Determination: 0.6982205640864202 RMSE: 0.2297761720882395 NRMSE: 0.12487903308617956 MAPE: 40.40251932527539 Protein: CCND1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ACTL6A', 'AKT1', 'ARID1A', 'ARID2', 'AR', 'ATF2', 'BRD2', 'BTG2', 'CCNA1', 'CCNB1', 'CCNE1', 'CCNH', 'CDC25A', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CKS1B', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUL1', 'DNMT3A', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'AGO2', 'EP300', 'ESR1', 'FOS', 'FOXA1', 'FOXM1', 'GADD45A', 'GATA3', 'GLI1', 'GLI3', 'GSK3B', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC4', 'HIST1H2BA', 'HIST2H2BE', 'HNF1A', 'IFNAR1', 'JAK2', 'JUN', 'KAT2B', 'LEF1', 'LYN', 'MAML1', 'MYB', 'MYC', 'NOTCH1', 'PBRM1', 'PCNA', 'PRMT5', 'PSMA6', 'PSMC6', 'PSMD10', 'PSMD6', 'PSMD7', 'PSME3', 'PTK6', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RELA', 'RUNX1', 'RUNX3', 'SKP1', 'SKP2', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'SUV39H1', 'TCF7L2', 'TFDP1', 'TP53', 'WDR77', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.5990227653982986 Spearman Correlation: 0.5536515056965445 Coefficient of Determination: 0.35882827346542523 RMSE: 0.1911699644554815 NRMSE: 0.11492585423734326 MAPE: 521.0719930934413 Pearson Correlation: 0.2207409804791595 Spearman Correlation: 0.2705297044190811 Coefficient of Determination: -0.06175444924799245 RMSE: 0.24259014101989235 NRMSE: 0.18768191884314256 MAPE: 292.42002264297787 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: RandomForests Pearson Correlation: 0.5631499686100497 Spearman Correlation: 0.5390914785135056 Coefficient of Determination: 0.28914869597619186 RMSE: 0.20128984248854584 NRMSE: 0.12100963225676369 MAPE: 477.52792550531706 Pearson Correlation: 0.29471645301089366 Spearman Correlation: 0.452921529639248 Coefficient of Determination: 0.07768097138223085 RMSE: 0.2261005852832818 NRMSE: 0.17492463427870414 MAPE: 317.05892263039914 Protein: ERBB2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ADAM17', 'ADRB2', 'AREG', 'ARHGEF11', 'ARHGEF12', 'BTC', 'CBL', 'CCND1', 'CD44', 'CDC37', 'CDH1', 'CTNNB1', 'CTNND1', 'CUL5', 'DIAPH1', 'DOCK7', 'EGFR', 'EGF', 'ERBB2IP', 'ERBB3', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FYN', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IL6R', 'IL6', 'INS', 'JAK1', 'JAK2', 'KRAS', 'LRPPRC', 'MAP2K1', 'MAPK8', 'MATK', 'MEMO1', 'MUC1', 'MUC4', 'MYC', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'PGAP3', 'PGR', 'PIK3CA', 'PIK3CB', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PLXNB1', 'PRKACA', 'PTEN', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'RHOA', 'RHOB', 'RHOC', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'RPS27A', 'SEMA4D', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SRC', 'STAT1', 'STAT3', 'STUB1', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TGFA', 'TP53', 'UBA52', 'UBB', 'UBC', 'VEGFA', 'YES1', 'YY1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.846650264240519 Spearman Correlation: 0.7123243309405133 Coefficient of Determination: 0.716816669938541 RMSE: 0.5231078228887084 NRMSE: 0.09387646445609683 MAPE: 333.68104968781614 Pearson Correlation: 0.734176661391641 Spearman Correlation: 0.5138327968003122 Coefficient of Determination: 0.5080034957095846 RMSE: 0.7415472351463441 NRMSE: 0.12633477607822277 MAPE: 753.4629034566599 Predictor: ElasticNet Pearson Correlation: 0.8032678770694227 Spearman Correlation: 0.6530561732410932 Coefficient of Determination: 0.26880723956433494 RMSE: 0.8405688928941333 NRMSE: 0.1508477456156584 MAPE: 356.93992176763606 Pearson Correlation: 0.8211600243614848 Spearman Correlation: 0.5478685006340845 Coefficient of Determination: 0.23671369309307344 RMSE: 0.9236374787800096 NRMSE: 0.1573568459682794 MAPE: 1415.5120955702916 Predictor: RandomForests Pearson Correlation: 0.8481728498544122 Spearman Correlation: 0.6807050673137784 Coefficient of Determination: 0.7163360509917931 RMSE: 0.5235515441797762 NRMSE: 0.09395609428418718 MAPE: 273.8506328801418 Pearson Correlation: 0.8072745956121323 Spearman Correlation: 0.5010446960552435 Coefficient of Determination: 0.6306863319364965 RMSE: 0.6424739183719914 NRMSE: 0.10945600599212761 MAPE: 1476.6991376048811 Protein: ERBB3 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AKT2', 'ANGPT1', 'ANGPT2', 'AREG', 'AR', 'BDNF', 'BMP4', 'BTC', 'CBLB', 'CBL', 'CCND1', 'CDH1', 'CSF1', 'CSK', 'CTNNB1', 'DCN', 'DOCK7', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FGF10', 'FGF19', 'FGF1', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FIGF', 'FLNA', 'FOXO3', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IGF1', 'IGF2', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'JAK1', 'JAK2', 'KITLG', 'KRAS', 'LAMA1', 'LAMB1', 'LAMC2', 'MAP2K1', 'MAPK8', 'MET', 'MUC4', 'NGF', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NTF3', 'PA2G4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PRKACA', 'PTEN', 'PTPN11', 'RNF41', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SOX10', 'SRC', 'TGFA', 'VEGFA', 'VEGFB', 'VEGFC', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.6050722222023426 Spearman Correlation: 0.596917256993673 Coefficient of Determination: 0.36611239408088114 RMSE: 0.3544018492651524 NRMSE: 0.09564288720868132 MAPE: 192.02826040358173 Pearson Correlation: 0.1251502946080982 Spearman Correlation: 0.26888108477221734 Coefficient of Determination: -0.6417148470802423 RMSE: 0.6634227317813386 NRMSE: 0.24484247867069875 MAPE: 382.16940050428497 Predictor: ElasticNet Pearson Correlation: 0.4240820569808477 Spearman Correlation: 0.4576864973153485 Coefficient of Determination: 0.052894093393100916 RMSE: 0.4332006721004267 NRMSE: 0.11690842783787932 MAPE: 209.09124798858497 Pearson Correlation: 0.4220320291864442 Spearman Correlation: 0.4525997463662082 Coefficient of Determination: 0.04895150311907892 RMSE: 0.5049435361724959 NRMSE: 0.18635422192010448 MAPE: 282.33796299073293 Predictor: RandomForests Pearson Correlation: 0.5452136536055863 Spearman Correlation: 0.579718471447528 Coefficient of Determination: 0.2810154614173048 RMSE: 0.37744147854677623 NRMSE: 0.10186062187705641 MAPE: 212.0710517498569 Pearson Correlation: 0.42385339480537054 Spearman Correlation: 0.3776168178714272 Coefficient of Determination: 0.1743540063903264 RMSE: 0.4704770294461702 NRMSE: 0.17363402929822233 MAPE: 362.7363007389323 Fold: 3 Protein: RB1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AATF', 'ABL1', 'AKT1', 'AR', 'ASF1A', 'ATF2', 'BGLAP', 'CASP3', 'CBX4', 'CCNA1', 'CCNA2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CEBPA', 'COL1A1', 'CREBBP', 'CTBP1', 'DNMT1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'ELF1', 'EP300', 'FOXM1', 'FZR1', 'GNB2L1', 'H1F0', 'H2AFV', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HIST1H2BA', 'HIST2H2AC', 'HIST2H2BE', 'HMGA1', 'HMGA2', 'HSP90AA1', 'ID2', 'JUN', 'MAPK14', 'MAPK1', 'MAPK3', 'MDM2', 'MEF2C', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NFYC', 'PCNA', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP2CA', 'PPP2CB', 'PRIM1', 'PRIM2', 'RAF1', 'RBBP4', 'RUNX2', 'SIRT1', 'SKP2', 'SMARCA2', 'SMC2', 'SMC4', 'SP100', 'SP1', 'SP3', 'SPI1', 'SUV39H1', 'TAF1', 'TBP', 'TERT', 'TFDP1', 'TP53BP1', 'TP53', 'TP73', 'YAP1', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.493821499314231 Spearman Correlation: 0.49040936426452825 Coefficient of Determination: 0.24385967318495494 RMSE: 0.2092005337542211 NRMSE: 0.07650692428109315 MAPE: 392.13227324848094 Pearson Correlation: 0.08650921194493394 Spearman Correlation: 0.07943989326550208 Coefficient of Determination: -0.30037138301944766 RMSE: 0.25277316533742583 NRMSE: 0.1773672518752023 MAPE: 472.9599476174891 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: RandomForests Pearson Correlation: 0.5955612306404852 Spearman Correlation: 0.4479699741717738 Coefficient of Determination: 0.1797618866936359 RMSE: 0.21788712107843547 NRMSE: 0.07968370431481696 MAPE: 166.45708572085704 Pearson Correlation: -0.014670344022122526 Spearman Correlation: 0.13396426389356478 Coefficient of Determination: -0.07349717755129115 RMSE: 0.2296665352119676 NRMSE: 0.16115366575351725 MAPE: 168.71434378733105 Protein: CDH1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ACTA1', 'ACTN1', 'ADAM10', 'ADAM15', 'CA2', 'CASP3', 'CBLL1', 'CDC42', 'CDH17', 'CDH3', 'CDH5', 'CTBP1', 'CTNNA1', 'CTNNB1', 'CTNND1', 'CTTN', 'DLG1', 'EFNA1', 'EGFR', 'EGF', 'ENAH', 'EPCAM', 'EPHA2', 'EXOC3', 'EXOC4', 'FER', 'FLOT1', 'FLOT2', 'FMN1', 'FYN', 'GDNF', 'GNA12', 'GNA13', 'HGF', 'HGS', 'IGF1R', 'IGF1', 'IGF2', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'ITGA6', 'ITGAE', 'ITGB4', 'ITGB7', 'AJUBA', 'JUP', 'KIFC3', 'KLK7', 'KLRG1', 'LAMB1', 'LAMC2', 'LIMA1', 'MAPK1', 'MAPK3', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MLLT4', 'MMP3', 'MMP7', 'MMP9', 'MYO6', 'NCSTN', 'NUMB', 'PARD6A', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PLEKHA7', 'PLG', 'PRKCI', 'PRKCZ', 'PSEN1', 'PVRL1', 'PVRL2', 'RAB5A', 'RAB7A', 'RAC1', 'RAP1A', 'RET', 'RHOA', 'SKIL', 'SMAD3', 'SMAD4', 'SNAI1', 'SNAI2', 'SNAI3', 'SRC', 'STX4', 'TJP1', 'TWIST1', 'VASP', 'VCL', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.7492023588877471 Spearman Correlation: 0.7240617785985481 Coefficient of Determination: 0.5613041745629648 RMSE: 0.7780577450662973 NRMSE: 0.12389059983221828 MAPE: 580.3292324427915 Pearson Correlation: 0.568594044436485 Spearman Correlation: 0.4892604645943216 Coefficient of Determination: 0.17353289428786844 RMSE: 0.8559561258278018 NRMSE: 0.1682766731859792 MAPE: 346.5180103491598 Predictor: ElasticNet Pearson Correlation: 0.6380282345593165 Spearman Correlation: 0.6352644350223394 Coefficient of Determination: 0.3137105732102806 RMSE: 0.9731588429046898 NRMSE: 0.1549566642630314 MAPE: 423.3436375931704 Pearson Correlation: 0.6249608256404112 Spearman Correlation: 0.4555742590306613 Coefficient of Determination: 0.26206155727757596 RMSE: 0.8088142340768861 NRMSE: 0.15900881415422605 MAPE: 209.8551839461587 Predictor: RandomForests Pearson Correlation: 0.7524338190668896 Spearman Correlation: 0.6942108204463948 Coefficient of Determination: 0.5617845261196615 RMSE: 0.7776316598487697 NRMSE: 0.12382275402833821 MAPE: 225.08244293518044 Pearson Correlation: 0.7280000432003245 Spearman Correlation: 0.49936096380413114 Coefficient of Determination: 0.5199522909693829 RMSE: 0.6523503784588328 NRMSE: 0.12824880636551583 MAPE: 155.4068923091974 Protein: CDH2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ADAM10', 'AFP', 'AHSG', 'ALB', 'APLP2', 'APOA1', 'APOB', 'APOE', 'APP', 'AXIN1', 'BDNF', 'BMP4', 'BNIP2', 'CALU', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH17', 'CDH18', 'CDH1', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDON', 'CREBBP', 'CSF1', 'CST3', 'CTNNA1', 'CTNNA2', 'CTNNB1', 'CTNND1', 'CYR61', 'FAM20C', 'FBN1', 'FER', 'FGFR1', 'FN1', 'FSTL1', 'GAS6', 'GJA1', 'GOLM1', 'GPC3', 'GRIA2', 'HSP90B1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL6', 'ITIH2', 'JUP', 'KIF5B', 'KNG1', 'KTN1', 'LAMB1', 'LAMC1', 'LGALS1', 'LRP5', 'LTBP1', 'MAP2K6', 'MAPK11', 'MAPK14', 'MATN3', 'MEF2A', 'MEF2C', 'MEF2D', 'MET', 'MFGE8', 'MSLN', 'NTRK2', 'P4HB', 'PCSK9', 'PIK3CA', 'PIK3R1', 'PTPN11', 'PTPN1', 'RAC1', 'RHOA', 'ROBO1', 'SCG2', 'SDC2', 'SERPINA1', 'SLIT1', 'SNAI1', 'SNAI2', 'SPAG9', 'SPARCL1', 'SPP1', 'STC2', 'TCF3', 'TIMP1', 'TMEM132A', 'TNC', 'VCAN', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.49061849430779675 Spearman Correlation: 0.4691996667255932 Coefficient of Determination: 0.2407065069568496 RMSE: 0.3322010369156763 NRMSE: 0.12037141710112194 MAPE: 984.2038457698638 Pearson Correlation: 0.054260988652488955 Spearman Correlation: 0.04491577201710745 Coefficient of Determination: -0.42207352482563154 RMSE: 0.39588669234774065 NRMSE: 0.20859416419781054 MAPE: 3416.9306254501507 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: RandomForests Pearson Correlation: 0.49290821448702327 Spearman Correlation: 0.45845591613102726 Coefficient of Determination: 0.17951866306918507 RMSE: 0.34532697003162727 NRMSE: 0.1251275346154168 MAPE: 581.6340437811261 Pearson Correlation: 0.0760139287005622 Spearman Correlation: 0.05782622953685905 Coefficient of Determination: -0.0126891420491837 RMSE: 0.33407805958420606 NRMSE: 0.17602696671244025 MAPE: 1587.1027603435464 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.5727097811799439 Spearman Correlation: 0.5792644266997269 Coefficient of Determination: 0.3279964934591795 RMSE: 0.1742073915858315 NRMSE: 0.12221992450035887 MAPE: 860.7578539003549 Pearson Correlation: 0.3078638378825443 Spearman Correlation: 0.3008441501764361 Coefficient of Determination: -0.033130551159451516 RMSE: 0.19142256059096116 NRMSE: 0.16650217940014192 MAPE: 244.52503490758494 Predictor: ElasticNet Pearson Correlation: 0.3537296502574104 Spearman Correlation: 0.3924945986822761 Coefficient of Determination: 0.008160638904660567 RMSE: 0.21164181539152277 NRMSE: 0.1484830606945072 MAPE: 112.44605711030167 Pearson Correlation: 0.3033541792228888 Spearman Correlation: 0.39626678636890733 Coefficient of Determination: 0.004094863769265267 RMSE: 0.1879422860835381 NRMSE: 0.16347498506835711 MAPE: 99.86167415143201 Predictor: RandomForests Pearson Correlation: 0.5653902264193225 Spearman Correlation: 0.5647909017496053 Coefficient of Determination: 0.2839064224243535 RMSE: 0.17983147143600559 NRMSE: 0.1261656503872745 MAPE: 669.4133299085007 Pearson Correlation: 0.36166175579365273 Spearman Correlation: 0.3745059165326251 Coefficient of Determination: 0.12762128326974997 RMSE: 0.17590089529614486 NRMSE: 0.15300120495111194 MAPE: 201.7567420267845 Protein: PTEN Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AR', 'BCR', 'CD79A', 'CD79B', 'CDIPT', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'DLG1', 'EGFR', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'FOXO3', 'FOXO4', 'FRK', 'GRB2', 'HRAS', 'INPP4A', 'INPP4B', 'INPP5B', 'INPP5D', 'INPP5J', 'INPP5K', 'INPPL1', 'IPMK', 'IRS1', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'MAST2', 'MDM2', 'MDM4', 'MKRN1', 'MTOR', 'MYC', 'NEDD4', 'NOTCH1', 'OCRL', 'OTUD3', 'PARK7', 'PDGFB', 'PDGFRB', 'PI4K2A', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIKFYVE', 'PIP4K2A', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PML', 'PREX2', 'PSMA6', 'PSMA7', 'PSMB9', 'PSMC6', 'PSMD10', 'PSMD5', 'PSME3', 'PTK2', 'RICTOR', 'RNF146', 'ROCK1', 'ROCK2', 'RPS27A', 'RPS6KB1', 'SACM1L', 'SHC1', 'SLC9A3R1', 'SLC9A3R2', 'SOS1', 'STK11', 'STUB1', 'SYNJ1', 'SYNJ2', 'TNKS2', 'TNKS', 'TNRC6A', 'TNRC6B', 'TP53', 'UBB', 'UBC', 'USP13', 'USP7', 'WWP2', 'XIAP', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 0.5819721868908739 Spearman Correlation: 0.5839848121569017 Coefficient of Determination: 0.3386916263145464 RMSE: 0.5117476085593039 NRMSE: 0.080016825667939 MAPE: 720.6581121388646 Pearson Correlation: 0.2560800509782117 Spearman Correlation: 0.2685045948203843 Coefficient of Determination: -0.16422604302924837 RMSE: 0.5081608630867844 NRMSE: 0.12149401403117306 MAPE: 158.01780187148933 Predictor: ElasticNet Pearson Correlation: 0.39827303354342625 Spearman Correlation: 0.41356668294841953 Coefficient of Determination: 0.046354707133582584 RMSE: 0.6145358816274843 NRMSE: 0.09608879393753174 MAPE: 286.03641114970173 Pearson Correlation: 0.29081833900356535 Spearman Correlation: 0.3183905036222397 Coefficient of Determination: -0.019268101756871436 RMSE: 0.4754740020620521 NRMSE: 0.11367905180080622 MAPE: 91.7171366456213 Predictor: RandomForests Pearson Correlation: 0.5708312473716917 Spearman Correlation: 0.5006071900730924 Coefficient of Determination: 0.2861624064467695 RMSE: 0.5316839113489705 NRMSE: 0.08313406478758041 MAPE: 321.1635150456908 Pearson Correlation: 0.39228370703543847 Spearman Correlation: 0.42074445004295485 Coefficient of Determination: 0.14843218116755785 RMSE: 0.4346024592474943 NRMSE: 0.10390724889960654 MAPE: 111.93748242375841 Protein: BRCA2 Protein Interaction Partners Count: 100 x_train_column_count: 99 x_train columns: ['ATM', 'ATRIP', 'ATR', 'BARD1', 'BLM', 'BRCA1', 'BRIP1', 'SLX4', 'RHNO1', 'RMI2', 'CDK2', 'CDK4', 'CHEK1', 'CHEK2', 'DMC1', 'DNA2', 'EME1', 'EME2', 'EXO1', 'FANCD2', 'FANCE', 'FANCG', 'FANCI', 'GEN1', 'H2AFX', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HUS1', 'KAT5', 'SPIDR', 'MLH1', 'MLH3', 'MND1', 'MRE11A', 'MSH4', 'MSH5', 'MUS81', 'NBN', 'PALB2', 'PARP1', 'PCNA', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'PSMC3IP', 'RAD17', 'RAD1', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD9A', 'RAD9B', 'RBBP8', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SPO11', 'SYCP3', 'TEX15', 'TOP3A', 'TOPBP1', 'TP53', 'UBA52', 'UBB', 'UBC', 'WRN', 'XRCC2', 'XRCC3', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.518921842752086 Spearman Correlation: 0.48245839810971913 Coefficient of Determination: 0.26927987888522054 RMSE: 0.1624589893637828 NRMSE: 0.10949437182472624 MAPE: 256.1590297870602 Pearson Correlation: 0.17052929129434036 Spearman Correlation: 0.17092233070237783 Coefficient of Determination: -0.03488279988620224 RMSE: 0.2178341573346815 NRMSE: 0.14982849963524167 MAPE: 292.3961381559978 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: RandomForests Pearson Correlation: 0.5221573333297352 Spearman Correlation: 0.46690069650256844 Coefficient of Determination: 0.19795589074461306 RMSE: 0.17020305099067898 NRMSE: 0.1147137269772457 MAPE: 197.09949288630483 Pearson Correlation: 0.05011125301404238 Spearman Correlation: 0.09698125911794413 Coefficient of Determination: -0.013596067374654464 RMSE: 0.21558217738816055 NRMSE: 0.14827956543353388 MAPE: 161.87918769290792 Protein: CDKN2A Protein Interaction Partners Count: 100 x_train_column_count: 100 x_train columns: ['ABL1', 'AKT1', 'ARF1', 'BMI1', 'BRCA1', 'CBX7', 'CCND1', 'CCND2', 'CCND3', 'CCNL1', 'CDC45', 'CDC6', 'CDC7', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPB', 'CTCF', 'DAXX', 'E2F1', 'E2F2', 'E2F3', 'EGFR', 'EGR1', 'AGO1', 'AGO3', 'AGO4', 'ERBB2', 'EZH2', 'FOXM1', 'GMNN', 'HDAC1', 'HIF1A', 'HRAS', 'HUWE1', 'IL6', 'KRAS', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAX', 'MCM10', 'MCM2', 'MCM5', 'MDM2', 'MDM4', 'MGMT', 'MLH1', 'MOV10', 'MRAS', 'MTAP', 'MYCN', 'MYC', 'NPM1', 'NRAS', 'ORC5', 'PIK3CA', 'PIK3R1', 'PTEN', 'RASSF1', 'RB1', 'RPS27A', 'RRAS2', 'RRAS', 'RUNX3', 'SMAD3', 'SMAD4', 'SMARCA4', 'SUMO1', 'SUMO2', 'SUMO3', 'TBX2', 'TERT', 'TFDP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TP53', 'TP63', 'TRIP12', 'TWIST1', 'UBA52', 'UBB', 'UBC', 'UBE2I', 'USP7', 'VEGFA', 'WRN', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.7248469273167809 Spearman Correlation: 0.6522991400525601 Coefficient of Determination: 0.5254030680405786 RMSE: 0.45990806592881 NRMSE: 0.10737487531023768 MAPE: 300.6956432948472 Pearson Correlation: 0.5319889491853289 Spearman Correlation: 0.4771555755059291 Coefficient of Determination: 0.24184431513274784 RMSE: 0.5716644576791954 NRMSE: 0.17648867206297902 MAPE: 188.1859851149876 Predictor: ElasticNet Pearson Correlation: 0.5263823313368368 Spearman Correlation: 0.3523618505537341 Coefficient of Determination: 0.11816765772125903 RMSE: 0.6269047705452355 NRMSE: 0.14636364646648195 MAPE: 255.81952109980634 Pearson Correlation: 0.4358897037928777 Spearman Correlation: 0.3068442249903366 Coefficient of Determination: 0.08105652686236942 RMSE: 0.6293705139794764 NRMSE: 0.19430413200564242 MAPE: 153.65620138159866 Predictor: RandomForests Pearson Correlation: 0.6713717701733481 Spearman Correlation: 0.6171187898147904 Coefficient of Determination: 0.4408312732603339 RMSE: 0.4992062341498074 NRMSE: 0.11654983053553591 MAPE: 202.2924022228656 Pearson Correlation: 0.6270859191911262 Spearman Correlation: 0.5914544962591366 Coefficient of Determination: 0.38440543231941837 RMSE: 0.515121151574826 NRMSE: 0.15903218535235897 MAPE: 102.26032325599306 Protein: TP53 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AKT1', 'APAF1', 'ATM', 'ATR', 'AURKA', 'AURKB', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2L1', 'BCL2', 'BCL6', 'BRCA1', 'CASP8', 'CCNA2', 'CCNE1', 'CCNG1', 'CDC25C', 'CDK2', 'CDK5', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CHEK1', 'CHEK2', 'COPS5', 'CREBBP', 'DDB2', 'DDX5', 'DYRK2', 'E2F4', 'EGR1', 'EHMT2', 'EP300', 'EZH2', 'FZR1', 'GADD45A', 'GLS2', 'GSK3B', 'HDAC1', 'HDAC2', 'HIF1A', 'HIPK2', 'HSP90AA1', 'HSPA1A', 'IGFBP3', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'MAPK14', 'MAPK1', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MCL1', 'MDM2', 'MDM4', 'MSH2', 'NGFR', 'NPM1', 'PLK3', 'PMAIP1', 'PPP1R13B', 'PPP1R13L', 'PRKDC', 'PRMT5', 'PTEN', 'RB1', 'RCHY1', 'DROSHA', 'RPA1', 'RRM2B', 'SETD7', 'SETD8', 'SFN', 'SIRT1', 'SMYD2', 'SNAI1', 'SNAI2', 'SP1', 'STAT3', 'STK11', 'SUMO1', 'SUMO2', 'TBP', 'TNFRSF10A', 'TNFRSF10B', 'TP53BP1', 'TP53BP2', 'TP53INP1', 'TP53RK', 'TXN', 'UBE2I', 'USP7', 'WRN', 'XRCC6', 'YY1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.6604922878327507 Spearman Correlation: 0.6037254325437036 Coefficient of Determination: 0.43625006228654106 RMSE: 0.3379594715989826 NRMSE: 0.0812207333811542 MAPE: 850.7211660221108 Pearson Correlation: 0.49671408929255306 Spearman Correlation: 0.4697489993640818 Coefficient of Determination: 0.17890926229192505 RMSE: 0.39004670300651 NRMSE: 0.14544809541986956 MAPE: 630.8668286306249 Predictor: ElasticNet Pearson Correlation: 0.4377868717790566 Spearman Correlation: 0.4295362351329146 Coefficient of Determination: 0.15425469525874858 RMSE: 0.4139435946114256 NRMSE: 0.09948175789748273 MAPE: 595.814751293532 Pearson Correlation: 0.3608135527402535 Spearman Correlation: 0.42393296674522135 Coefficient of Determination: 0.10308749715554932 RMSE: 0.4076580978590266 NRMSE: 0.1520153701058014 MAPE: 317.62727159559006 Predictor: RandomForests Pearson Correlation: 0.6391457427867844 Spearman Correlation: 0.5738541184231455 Coefficient of Determination: 0.35795781438014296 RMSE: 0.36066429582771786 NRMSE: 0.086677312143167 MAPE: 586.8426148813124 Pearson Correlation: 0.4804190782263101 Spearman Correlation: 0.3898437383115112 Coefficient of Determination: 0.21338759158484022 RMSE: 0.38176967754786406 NRMSE: 0.14236159941971818 MAPE: 385.7156469900238 Protein: CTNNB1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'AKT1', 'APC2', 'APC', 'AR', 'AXIN1', 'AXIN2', 'BCL9', 'BTRC', 'CASP3', 'CBY1', 'CCND1', 'CDC73', 'CDH11', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDH5', 'CDH8', 'CHD8', 'CREBBP', 'CSNK1A1', 'CSNK1E', 'CTBP1', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNBIP1', 'CTNND1', 'DVL1', 'DVL2', 'DVL3', 'EGFR', 'EGF', 'EP300', 'ERBB2', 'AMER1', 'FBXW11', 'FER', 'FGFR1', 'FOXO1', 'FOXO3', 'FYN', 'FZD1', 'FZD2', 'FZD5', 'GSK3A', 'GSK3B', 'HNF4A', 'IGF1R', 'IQGAP1', 'JUN', 'JUP', 'KDR', 'KLF4', 'LEF1', 'LRP5', 'LRP6', 'MAPK9', 'MEN1', 'MET', 'MMP7', 'MYC', 'NLK', 'NOTCH1', 'PIK3CA', 'PIK3R1', 'PITX2', 'PSEN1', 'PTPN11', 'PTPN1', 'PYGO2', 'RUVBL1', 'SKP1', 'SMAD4', 'SMAD7', 'SMARCA4', 'SOX17', 'SOX2', 'SOX6', 'SOX9', 'SRC', 'TBL1X', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TGFBR1', 'TGFBR2', 'TJP1', 'TLE1', 'VCL', 'VEGFA', 'WNT1', 'WNT3A', 'WNT8A', 'WNT8B', 'YWHAZ', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.678216946324291 Spearman Correlation: 0.6536543128781496 Coefficient of Determination: 0.4599782262814466 RMSE: 0.56525376770937 NRMSE: 0.11118288113874311 MAPE: 365.24048637211985 Pearson Correlation: 0.42260831812169686 Spearman Correlation: 0.3748051721343159 Coefficient of Determination: -0.04605870049890615 RMSE: 0.6269277748449369 NRMSE: 0.20495203336001072 MAPE: 1174.0121470981153 Predictor: ElasticNet Pearson Correlation: 0.4803008337905117 Spearman Correlation: 0.4647667580047741 Coefficient of Determination: 0.08506259436431107 RMSE: 0.7357555080356374 NRMSE: 0.14471980881896881 MAPE: 415.0911217325187 Pearson Correlation: 0.2498042644270396 Spearman Correlation: 0.2674522126211051 Coefficient of Determination: 0.03314779717942595 RMSE: 0.6027254478920415 NRMSE: 0.1970399319664067 MAPE: 1845.498600179112 Predictor: RandomForests Pearson Correlation: 0.6661312165524925 Spearman Correlation: 0.6347797745153959 Coefficient of Determination: 0.43853256518190087 RMSE: 0.5763683393428425 NRMSE: 0.11336906753399735 MAPE: 242.10542978288473 Pearson Correlation: 0.43189919620587325 Spearman Correlation: 0.27905120893201024 Coefficient of Determination: 0.16249536723411284 RMSE: 0.5609615467177448 NRMSE: 0.18338669022123794 MAPE: 1007.4727106586553 Protein: CCNE1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['ABL1', 'BARD1', 'BRCA1', 'CABLES1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNH', 'CCT2', 'CCT3', 'CCT4', 'CCT6A', 'CCT7', 'CDC25A', 'CDC6', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDT1', 'CKS1B', 'CKS2', 'CUL1', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'EP400', 'FOXM1', 'HDAC1', 'IFNAR1', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'MNAT1', 'MYC', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PCNA', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB7', 'PSMC1', 'PSMC2', 'PSMC4', 'PSMC5', 'PSMD10', 'PSMD11', 'PSMD14', 'PSMD1', 'PSMD3', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSME3', 'PTK6', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RHOA', 'RPS27A', 'RRN3', 'SKP1', 'SKP2', 'STAT5A', 'STAT5B', 'TCP1', 'TFDP1', 'TP53', 'TP73', 'UBB', 'UBC', 'WEE1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.8896622937332072 Spearman Correlation: 0.7214768507010174 Coefficient of Determination: 0.7914989968906315 RMSE: 0.23854831159762593 NRMSE: 0.057568914640931036 MAPE: 47.07317346782919 Pearson Correlation: 0.7341609096695707 Spearman Correlation: 0.49959974563273857 Coefficient of Determination: 0.43573142922364505 RMSE: 0.27409635758558254 NRMSE: 0.1193955471470935 MAPE: 101.90055834655192 Predictor: ElasticNet Pearson Correlation: 0.6902742286350538 Spearman Correlation: 0.6169027215848906 Coefficient of Determination: 0.33548795446881097 RMSE: 0.4258667187846 NRMSE: 0.10277450558307792 MAPE: 78.46380126749081 Pearson Correlation: 0.5787741656023243 Spearman Correlation: 0.5223780845147696 Coefficient of Determination: 0.29295946517243254 RMSE: 0.3068191695435673 NRMSE: 0.13364950539860054 MAPE: 92.65262292127885 Predictor: RandomForests Pearson Correlation: 0.8627114244015965 Spearman Correlation: 0.7269204277536142 Coefficient of Determination: 0.7416334567459337 RMSE: 0.26554639508307426 NRMSE: 0.06408436785555766 MAPE: 55.98907083758849 Pearson Correlation: 0.770885107897393 Spearman Correlation: 0.6684149573709636 Coefficient of Determination: 0.5291341557642604 RMSE: 0.25038535765203646 NRMSE: 0.1090671070488463 MAPE: 79.58878990181303 Protein: CCND1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ACTL6A', 'AKT1', 'ARID1A', 'ARID2', 'AR', 'ATF2', 'BRD2', 'BTG2', 'CCNA1', 'CCNB1', 'CCNE1', 'CCNH', 'CDC25A', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CKS1B', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUL1', 'DNMT3A', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'AGO2', 'EP300', 'ESR1', 'FOS', 'FOXA1', 'FOXM1', 'GADD45A', 'GATA3', 'GLI1', 'GLI3', 'GSK3B', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC4', 'HIST1H2BA', 'HIST2H2BE', 'HNF1A', 'IFNAR1', 'JAK2', 'JUN', 'KAT2B', 'LEF1', 'LYN', 'MAML1', 'MYB', 'MYC', 'NOTCH1', 'PBRM1', 'PCNA', 'PRMT5', 'PSMA6', 'PSMC6', 'PSMD10', 'PSMD6', 'PSMD7', 'PSME3', 'PTK6', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RELA', 'RUNX1', 'RUNX3', 'SKP1', 'SKP2', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'SUV39H1', 'TCF7L2', 'TFDP1', 'TP53', 'WDR77', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.5837974359856966 Spearman Correlation: 0.5579925334219846 Coefficient of Determination: 0.3408194462634734 RMSE: 0.19863634190917473 NRMSE: 0.11941442444432239 MAPE: 483.715489629889 Pearson Correlation: 0.15083587638976992 Spearman Correlation: 0.11990922580082046 Coefficient of Determination: -0.14554458092158362 RMSE: 0.22448452790066611 NRMSE: 0.21271500658624895 MAPE: 377.59727008043876 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: RandomForests Pearson Correlation: 0.5574382931774727 Spearman Correlation: 0.5115894031152839 Coefficient of Determination: 0.27287753896835265 RMSE: 0.20862209166280588 NRMSE: 0.12541756842096757 MAPE: 484.02077540170245 Pearson Correlation: 0.38420245784361057 Spearman Correlation: 0.3416734414989403 Coefficient of Determination: 0.13797720234983835 RMSE: 0.194733106394091 NRMSE: 0.1845234252736973 MAPE: 286.8581137015489 Protein: ERBB2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ADAM17', 'ADRB2', 'AREG', 'ARHGEF11', 'ARHGEF12', 'BTC', 'CBL', 'CCND1', 'CD44', 'CDC37', 'CDH1', 'CTNNB1', 'CTNND1', 'CUL5', 'DIAPH1', 'DOCK7', 'EGFR', 'EGF', 'ERBB2IP', 'ERBB3', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FYN', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IL6R', 'IL6', 'INS', 'JAK1', 'JAK2', 'KRAS', 'LRPPRC', 'MAP2K1', 'MAPK8', 'MATK', 'MEMO1', 'MUC1', 'MUC4', 'MYC', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'PGAP3', 'PGR', 'PIK3CA', 'PIK3CB', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PLXNB1', 'PRKACA', 'PTEN', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'RHOA', 'RHOB', 'RHOC', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'RPS27A', 'SEMA4D', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SRC', 'STAT1', 'STAT3', 'STUB1', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TGFA', 'TP53', 'UBA52', 'UBB', 'UBC', 'VEGFA', 'YES1', 'YY1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 0.8532021254618397 Spearman Correlation: 0.7207290624252993 Coefficient of Determination: 0.7279538668926004 RMSE: 0.5117929717195496 NRMSE: 0.08719235594997182 MAPE: 537.2718365645682 Pearson Correlation: 0.7806645939488788 Spearman Correlation: 0.5663918083668892 Coefficient of Determination: 0.5880639226090225 RMSE: 0.6845300655682581 NRMSE: 0.1234811432225013 MAPE: 271.30921442669995 Predictor: ElasticNet Pearson Correlation: 0.7933714282998688 Spearman Correlation: 0.6194867891621707 Coefficient of Determination: 0.258513277549565 RMSE: 0.8449377780763444 NRMSE: 0.14394905669392719 MAPE: 635.4648735816759 Pearson Correlation: 0.8284270163846452 Spearman Correlation: 0.612165503517357 Coefficient of Determination: 0.2554653966863851 RMSE: 0.9202801543728294 NRMSE: 0.16600767630652094 MAPE: 230.91050911074618 Predictor: RandomForests Pearson Correlation: 0.8323152680716361 Spearman Correlation: 0.6466808582088528 Coefficient of Determination: 0.687121723576946 RMSE: 0.5488589421578967 NRMSE: 0.0935071540552152 MAPE: 530.1809820817119 Pearson Correlation: 0.8689888493238265 Spearman Correlation: 0.707782313058422 Coefficient of Determination: 0.7501293991063542 RMSE: 0.5331325437528497 NRMSE: 0.09617081747471855 MAPE: 199.28302683331736 Protein: ERBB3 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AKT2', 'ANGPT1', 'ANGPT2', 'AREG', 'AR', 'BDNF', 'BMP4', 'BTC', 'CBLB', 'CBL', 'CCND1', 'CDH1', 'CSF1', 'CSK', 'CTNNB1', 'DCN', 'DOCK7', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FGF10', 'FGF19', 'FGF1', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FIGF', 'FLNA', 'FOXO3', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IGF1', 'IGF2', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'JAK1', 'JAK2', 'KITLG', 'KRAS', 'LAMA1', 'LAMB1', 'LAMC2', 'MAP2K1', 'MAPK8', 'MET', 'MUC4', 'NGF', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NTF3', 'PA2G4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PRKACA', 'PTEN', 'PTPN11', 'RNF41', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SOX10', 'SRC', 'TGFA', 'VEGFA', 'VEGFB', 'VEGFC', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.6178646400878778 Spearman Correlation: 0.6168648283503396 Coefficient of Determination: 0.38175671347092277 RMSE: 0.35461775078286684 NRMSE: 0.1285839255595321 MAPE: 204.31054957740704 Pearson Correlation: 0.19404237142989209 Spearman Correlation: 0.26638985523510267 Coefficient of Determination: -0.2344697018838997 RMSE: 0.5496689746744833 NRMSE: 0.15282379222200132 MAPE: 217.11290064204195 Predictor: ElasticNet Pearson Correlation: 0.43939588062909857 Spearman Correlation: 0.4500816194079677 Coefficient of Determination: 0.06580315050692376 RMSE: 0.4359131451204354 NRMSE: 0.1580615275993558 MAPE: 229.32909815608417 Pearson Correlation: 0.37567451016973363 Spearman Correlation: 0.4462075586977394 Coefficient of Determination: 0.030311541497765937 RMSE: 0.4871661676356526 NRMSE: 0.13544621328578652 MAPE: 154.98339900971524 Predictor: RandomForests Pearson Correlation: 0.5564295279937248 Spearman Correlation: 0.5963535880548776 Coefficient of Determination: 0.29654198166972134 RMSE: 0.37826822234510654 NRMSE: 0.13715955514404468 MAPE: 233.76510051435812 Pearson Correlation: 0.37862951438118275 Spearman Correlation: 0.3657286642704281 Coefficient of Determination: 0.11713651262517022 RMSE: 0.4648445942592307 NRMSE: 0.1292401735620298 MAPE: 159.01422162833032 Fold: 4 Protein: RB1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AATF', 'ABL1', 'AKT1', 'AR', 'ASF1A', 'ATF2', 'BGLAP', 'CASP3', 'CBX4', 'CCNA1', 'CCNA2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CEBPA', 'COL1A1', 'CREBBP', 'CTBP1', 'DNMT1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'ELF1', 'EP300', 'FOXM1', 'FZR1', 'GNB2L1', 'H1F0', 'H2AFV', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HIST1H2BA', 'HIST2H2AC', 'HIST2H2BE', 'HMGA1', 'HMGA2', 'HSP90AA1', 'ID2', 'JUN', 'MAPK14', 'MAPK1', 'MAPK3', 'MDM2', 'MEF2C', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NFYC', 'PCNA', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP2CA', 'PPP2CB', 'PRIM1', 'PRIM2', 'RAF1', 'RBBP4', 'RUNX2', 'SIRT1', 'SKP2', 'SMARCA2', 'SMC2', 'SMC4', 'SP100', 'SP1', 'SP3', 'SPI1', 'SUV39H1', 'TAF1', 'TBP', 'TERT', 'TFDP1', 'TP53BP1', 'TP53', 'TP73', 'YAP1', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.4875747745701665 Spearman Correlation: 0.4555438598018932 Coefficient of Determination: 0.2377291607971488 RMSE: 0.21958939291793453 NRMSE: 0.08030624375290174 MAPE: 345.9987622234791 Pearson Correlation: 0.12296914457550132 Spearman Correlation: 0.16345590344019253 Coefficient of Determination: -0.5830427283840973 RMSE: 0.20745336561686376 NRMSE: 0.19876342852188686 MAPE: 365.30431589863224 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: RandomForests Pearson Correlation: 0.5295541412776307 Spearman Correlation: 0.3951745569721164 Coefficient of Determination: 0.16828902434987514 RMSE: 0.22937333090508497 NRMSE: 0.08388433693135056 MAPE: 170.33048573313587 Pearson Correlation: 0.10988100774688508 Spearman Correlation: 0.22686816543847185 Coefficient of Determination: -0.09267721288551667 RMSE: 0.17235350095759733 NRMSE: 0.16513384907599485 MAPE: 105.74982355234191 Protein: CDH1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ACTA1', 'ACTN1', 'ADAM10', 'ADAM15', 'CA2', 'CASP3', 'CBLL1', 'CDC42', 'CDH17', 'CDH3', 'CDH5', 'CTBP1', 'CTNNA1', 'CTNNB1', 'CTNND1', 'CTTN', 'DLG1', 'EFNA1', 'EGFR', 'EGF', 'ENAH', 'EPCAM', 'EPHA2', 'EXOC3', 'EXOC4', 'FER', 'FLOT1', 'FLOT2', 'FMN1', 'FYN', 'GDNF', 'GNA12', 'GNA13', 'HGF', 'HGS', 'IGF1R', 'IGF1', 'IGF2', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'ITGA6', 'ITGAE', 'ITGB4', 'ITGB7', 'AJUBA', 'JUP', 'KIFC3', 'KLK7', 'KLRG1', 'LAMB1', 'LAMC2', 'LIMA1', 'MAPK1', 'MAPK3', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MLLT4', 'MMP3', 'MMP7', 'MMP9', 'MYO6', 'NCSTN', 'NUMB', 'PARD6A', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PLEKHA7', 'PLG', 'PRKCI', 'PRKCZ', 'PSEN1', 'PVRL1', 'PVRL2', 'RAB5A', 'RAB7A', 'RAC1', 'RAP1A', 'RET', 'RHOA', 'SKIL', 'SMAD3', 'SMAD4', 'SNAI1', 'SNAI2', 'SNAI3', 'SRC', 'STX4', 'TJP1', 'TWIST1', 'VASP', 'VCL', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 0.7438080568294365 Spearman Correlation: 0.7079022704896073 Coefficient of Determination: 0.5532504254043817 RMSE: 0.7479396338686939 NRMSE: 0.11909487498307281 MAPE: 503.4572347253402 Pearson Correlation: 0.36934179825013125 Spearman Correlation: 0.41259616703450164 Coefficient of Determination: -0.3985837346558436 RMSE: 1.3794605745587716 NRMSE: 0.2502559004678298 MAPE: 468.26453366082035 Predictor: ElasticNet Pearson Correlation: 0.6174619837449445 Spearman Correlation: 0.63682931735813 Coefficient of Determination: 0.2891117310293394 RMSE: 0.9434853203730189 NRMSE: 0.15023173153291597 MAPE: 424.1823346452635 Pearson Correlation: 0.7042022189555273 Spearman Correlation: 0.5253357273781468 Coefficient of Determination: 0.2542887944172081 RMSE: 1.0072804170036527 NRMSE: 0.18273655110548467 MAPE: 273.268135061593 Predictor: RandomForests Pearson Correlation: 0.744403162376981 Spearman Correlation: 0.7048831848126462 Coefficient of Determination: 0.5496207955569148 RMSE: 0.7509718161643397 NRMSE: 0.1195776911825005 MAPE: 236.42227241163098 Pearson Correlation: 0.7645869616479644 Spearman Correlation: 0.46733260436301827 Coefficient of Determination: 0.5170582344841836 RMSE: 0.8106108992805026 NRMSE: 0.14705759937602092 MAPE: 192.8409827623321 Protein: CDH2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ADAM10', 'AFP', 'AHSG', 'ALB', 'APLP2', 'APOA1', 'APOB', 'APOE', 'APP', 'AXIN1', 'BDNF', 'BMP4', 'BNIP2', 'CALU', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH17', 'CDH18', 'CDH1', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDON', 'CREBBP', 'CSF1', 'CST3', 'CTNNA1', 'CTNNA2', 'CTNNB1', 'CTNND1', 'CYR61', 'FAM20C', 'FBN1', 'FER', 'FGFR1', 'FN1', 'FSTL1', 'GAS6', 'GJA1', 'GOLM1', 'GPC3', 'GRIA2', 'HSP90B1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL6', 'ITIH2', 'JUP', 'KIF5B', 'KNG1', 'KTN1', 'LAMB1', 'LAMC1', 'LGALS1', 'LRP5', 'LTBP1', 'MAP2K6', 'MAPK11', 'MAPK14', 'MATN3', 'MEF2A', 'MEF2C', 'MEF2D', 'MET', 'MFGE8', 'MSLN', 'NTRK2', 'P4HB', 'PCSK9', 'PIK3CA', 'PIK3R1', 'PTPN11', 'PTPN1', 'RAC1', 'RHOA', 'ROBO1', 'SCG2', 'SDC2', 'SERPINA1', 'SLIT1', 'SNAI1', 'SNAI2', 'SPAG9', 'SPARCL1', 'SPP1', 'STC2', 'TCF3', 'TIMP1', 'TMEM132A', 'TNC', 'VCAN', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.49078685904123714 Spearman Correlation: 0.470001824232073 Coefficient of Determination: 0.24087174100756326 RMSE: 0.33053173480115666 NRMSE: 0.11976655366372806 MAPE: 1569.6862332879334 Pearson Correlation: 0.10863191180945109 Spearman Correlation: 0.07453708899113456 Coefficient of Determination: -0.4058581823584775 RMSE: 0.3951510226904187 NRMSE: 0.20384580841196126 MAPE: 390.9069631568336 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: RandomForests Pearson Correlation: 0.4802801826449157 Spearman Correlation: 0.42266133554478724 Coefficient of Determination: 0.15048099135895376 RMSE: 0.34965692524578784 NRMSE: 0.12669647265953615 MAPE: 1040.8719225041978 Pearson Correlation: 0.23166485594101424 Spearman Correlation: 0.265023254654048 Coefficient of Determination: 0.013150583019315598 RMSE: 0.3310684520706445 NRMSE: 0.17078765428100598 MAPE: 171.55854601333823 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.5168390583924104 Spearman Correlation: 0.5403178575375212 Coefficient of Determination: 0.2671226122799537 RMSE: 0.1762760293337962 NRMSE: 0.12562968009877576 MAPE: 434.5503985700555 Pearson Correlation: 0.4063723413974719 Spearman Correlation: 0.40395266773899924 Coefficient of Determination: -0.3251363019352269 RMSE: 0.2392036845219124 NRMSE: 0.21290179657325273 MAPE: 926.9153647230152 Predictor: ElasticNet Pearson Correlation: 0.2934400197619197 Spearman Correlation: 0.34742358107542676 Coefficient of Determination: 0.001241745743384426 RMSE: 0.20578219201564923 NRMSE: 0.1466583462916382 MAPE: 175.4825468457067 Pearson Correlation: 0.3454805850435642 Spearman Correlation: 0.347897105948952 Coefficient of Determination: -0.09899485657343421 RMSE: 0.21783889185129154 NRMSE: 0.19388619172552068 MAPE: 210.66662908756922 Predictor: RandomForests Pearson Correlation: 0.5492470972367409 Spearman Correlation: 0.5433468367086957 Coefficient of Determination: 0.2574319733918553 RMSE: 0.17743762712931946 NRMSE: 0.12645753604723653 MAPE: 435.61382629898475 Pearson Correlation: 0.450451981096876 Spearman Correlation: 0.3980673075724137 Coefficient of Determination: 0.12512572123777044 RMSE: 0.194361576653241 NRMSE: 0.1729903489446223 MAPE: 635.6356775073434 Protein: PTEN Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AR', 'BCR', 'CD79A', 'CD79B', 'CDIPT', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'DLG1', 'EGFR', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'FOXO3', 'FOXO4', 'FRK', 'GRB2', 'HRAS', 'INPP4A', 'INPP4B', 'INPP5B', 'INPP5D', 'INPP5J', 'INPP5K', 'INPPL1', 'IPMK', 'IRS1', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'MAST2', 'MDM2', 'MDM4', 'MKRN1', 'MTOR', 'MYC', 'NEDD4', 'NOTCH1', 'OCRL', 'OTUD3', 'PARK7', 'PDGFB', 'PDGFRB', 'PI4K2A', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIKFYVE', 'PIP4K2A', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PML', 'PREX2', 'PSMA6', 'PSMA7', 'PSMB9', 'PSMC6', 'PSMD10', 'PSMD5', 'PSME3', 'PTK2', 'RICTOR', 'RNF146', 'ROCK1', 'ROCK2', 'RPS27A', 'RPS6KB1', 'SACM1L', 'SHC1', 'SLC9A3R1', 'SLC9A3R2', 'SOS1', 'STK11', 'STUB1', 'SYNJ1', 'SYNJ2', 'TNKS2', 'TNKS', 'TNRC6A', 'TNRC6B', 'TP53', 'UBB', 'UBC', 'USP13', 'USP7', 'WWP2', 'XIAP', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 0.5770441596771159 Spearman Correlation: 0.5568087081035928 Coefficient of Determination: 0.33297996221746895 RMSE: 0.458814053996104 NRMSE: 0.08875233170769575 MAPE: 471.7931463715712 Pearson Correlation: 0.26938018231447625 Spearman Correlation: 0.3216773276474769 Coefficient of Determination: 0.02512513002953598 RMSE: 0.7361454998995667 NRMSE: 0.11510366662490293 MAPE: 735.2465334721519 Predictor: ElasticNet Pearson Correlation: 0.38766019852646455 Spearman Correlation: 0.38075655553114846 Coefficient of Determination: 0.02981400452295735 RMSE: 0.5533434489873975 NRMSE: 0.10703796212229139 MAPE: 268.66789047598405 Pearson Correlation: 0.40005409975990863 Spearman Correlation: 0.42466614296936367 Coefficient of Determination: 0.020587591254742965 RMSE: 0.7378566994813243 NRMSE: 0.11537122968983257 MAPE: 378.41852262816127 Predictor: RandomForests Pearson Correlation: 0.5482440039800978 Spearman Correlation: 0.5008355919250681 Coefficient of Determination: 0.2587059902201798 RMSE: 0.48368488651714353 NRMSE: 0.09356330983386404 MAPE: 188.87375994782946 Pearson Correlation: 0.5167831029968877 Spearman Correlation: 0.4806436046832455 Coefficient of Determination: 0.2239414646934551 RMSE: 0.656805020411679 NRMSE: 0.10269799396633242 MAPE: 309.59387554589847 Protein: BRCA2 Protein Interaction Partners Count: 100 x_train_column_count: 99 x_train columns: ['ATM', 'ATRIP', 'ATR', 'BARD1', 'BLM', 'BRCA1', 'BRIP1', 'SLX4', 'RHNO1', 'RMI2', 'CDK2', 'CDK4', 'CHEK1', 'CHEK2', 'DMC1', 'DNA2', 'EME1', 'EME2', 'EXO1', 'FANCD2', 'FANCE', 'FANCG', 'FANCI', 'GEN1', 'H2AFX', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HUS1', 'KAT5', 'SPIDR', 'MLH1', 'MLH3', 'MND1', 'MRE11A', 'MSH4', 'MSH5', 'MUS81', 'NBN', 'PALB2', 'PARP1', 'PCNA', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'PSMC3IP', 'RAD17', 'RAD1', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD9A', 'RAD9B', 'RBBP8', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SPO11', 'SYCP3', 'TEX15', 'TOP3A', 'TOPBP1', 'TP53', 'UBA52', 'UBB', 'UBC', 'WRN', 'XRCC2', 'XRCC3', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.5065671260114403 Spearman Correlation: 0.4457829338421237 Coefficient of Determination: 0.25661025315549035 RMSE: 0.16536770479884885 NRMSE: 0.10653419539304163 MAPE: 254.7760608626407 Pearson Correlation: 0.2043403656816545 Spearman Correlation: 0.14894699435155054 Coefficient of Determination: -0.07765372281538174 RMSE: 0.2160364895201502 NRMSE: 0.20988476699939787 MAPE: 260.74889240213594 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: RandomForests Pearson Correlation: 0.5318566934237081 Spearman Correlation: 0.42883181297300554 Coefficient of Determination: 0.15830770147358475 RMSE: 0.17596208201913474 NRMSE: 0.11335936995917845 MAPE: 148.01594316382852 Pearson Correlation: 0.2035809587675015 Spearman Correlation: 0.2005236973029589 Coefficient of Determination: 0.033858378891521435 RMSE: 0.20455395963448292 NRMSE: 0.19872920658934912 MAPE: 248.0845807777245 Protein: CDKN2A Protein Interaction Partners Count: 100 x_train_column_count: 100 x_train columns: ['ABL1', 'AKT1', 'ARF1', 'BMI1', 'BRCA1', 'CBX7', 'CCND1', 'CCND2', 'CCND3', 'CCNL1', 'CDC45', 'CDC6', 'CDC7', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPB', 'CTCF', 'DAXX', 'E2F1', 'E2F2', 'E2F3', 'EGFR', 'EGR1', 'AGO1', 'AGO3', 'AGO4', 'ERBB2', 'EZH2', 'FOXM1', 'GMNN', 'HDAC1', 'HIF1A', 'HRAS', 'HUWE1', 'IL6', 'KRAS', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAX', 'MCM10', 'MCM2', 'MCM5', 'MDM2', 'MDM4', 'MGMT', 'MLH1', 'MOV10', 'MRAS', 'MTAP', 'MYCN', 'MYC', 'NPM1', 'NRAS', 'ORC5', 'PIK3CA', 'PIK3R1', 'PTEN', 'RASSF1', 'RB1', 'RPS27A', 'RRAS2', 'RRAS', 'RUNX3', 'SMAD3', 'SMAD4', 'SMARCA4', 'SUMO1', 'SUMO2', 'SUMO3', 'TBX2', 'TERT', 'TFDP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TP53', 'TP63', 'TRIP12', 'TWIST1', 'UBA52', 'UBB', 'UBC', 'UBE2I', 'USP7', 'VEGFA', 'WRN', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.7248491057409844 Spearman Correlation: 0.6509232503493716 Coefficient of Determination: 0.5254062260935048 RMSE: 0.4642927795033928 NRMSE: 0.10496050175277331 MAPE: 296.7193895284207 Pearson Correlation: 0.5469339731300361 Spearman Correlation: 0.4337934388209329 Coefficient of Determination: 0.16559299155937635 RMSE: 0.5760959840606508 NRMSE: 0.17357516844249798 MAPE: 239.93088455589358 Predictor: ElasticNet Pearson Correlation: 0.4943081903922901 Spearman Correlation: 0.31574713259503673 Coefficient of Determination: 0.0988364716234783 RMSE: 0.6397830277477807 NRMSE: 0.14463276313954576 MAPE: 233.83660733381956 Pearson Correlation: 0.5247909101201343 Spearman Correlation: 0.2919163580593275 Coefficient of Determination: 0.10443575558592966 RMSE: 0.5968349529507532 NRMSE: 0.17982372791526158 MAPE: 164.26376685425836 Predictor: RandomForests Pearson Correlation: 0.6785030748887375 Spearman Correlation: 0.6100101397347005 Coefficient of Determination: 0.4526660084016304 RMSE: 0.49860556531137956 NRMSE: 0.11271743309853724 MAPE: 194.65443341141966 Pearson Correlation: 0.6044111873448079 Spearman Correlation: 0.4954905640476105 Coefficient of Determination: 0.34997621094047127 RMSE: 0.508476049802592 NRMSE: 0.15320158174226936 MAPE: 144.40960714327383 Protein: TP53 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AKT1', 'APAF1', 'ATM', 'ATR', 'AURKA', 'AURKB', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2L1', 'BCL2', 'BCL6', 'BRCA1', 'CASP8', 'CCNA2', 'CCNE1', 'CCNG1', 'CDC25C', 'CDK2', 'CDK5', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CHEK1', 'CHEK2', 'COPS5', 'CREBBP', 'DDB2', 'DDX5', 'DYRK2', 'E2F4', 'EGR1', 'EHMT2', 'EP300', 'EZH2', 'FZR1', 'GADD45A', 'GLS2', 'GSK3B', 'HDAC1', 'HDAC2', 'HIF1A', 'HIPK2', 'HSP90AA1', 'HSPA1A', 'IGFBP3', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'MAPK14', 'MAPK1', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MCL1', 'MDM2', 'MDM4', 'MSH2', 'NGFR', 'NPM1', 'PLK3', 'PMAIP1', 'PPP1R13B', 'PPP1R13L', 'PRKDC', 'PRMT5', 'PTEN', 'RB1', 'RCHY1', 'DROSHA', 'RPA1', 'RRM2B', 'SETD7', 'SETD8', 'SFN', 'SIRT1', 'SMYD2', 'SNAI1', 'SNAI2', 'SP1', 'STAT3', 'STK11', 'SUMO1', 'SUMO2', 'TBP', 'TNFRSF10A', 'TNFRSF10B', 'TP53BP1', 'TP53BP2', 'TP53INP1', 'TP53RK', 'TXN', 'UBE2I', 'USP7', 'WRN', 'XRCC6', 'YY1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 0.6660144260795982 Spearman Correlation: 0.6194033969783946 Coefficient of Determination: 0.44357521574613623 RMSE: 0.33576137500726577 NRMSE: 0.08069247176334193 MAPE: 1142.6240602171342 Pearson Correlation: 0.460792473899889 Spearman Correlation: 0.3757179017194728 Coefficient of Determination: 0.11269311630957879 RMSE: 0.406754144524549 NRMSE: 0.12907912684835904 MAPE: 376.2111229265098 Predictor: ElasticNet Pearson Correlation: 0.42303543455714054 Spearman Correlation: 0.45367193574742665 Coefficient of Determination: 0.14311093673514375 RMSE: 0.4166676676346319 NRMSE: 0.10013642577136073 MAPE: 633.0031102576147 Pearson Correlation: 0.4196883825696257 Spearman Correlation: 0.3773338819686031 Coefficient of Determination: 0.14304944788110985 RMSE: 0.3997357059330358 NRMSE: 0.12685189957255516 MAPE: 188.77484256777345 Predictor: RandomForests Pearson Correlation: 0.6260084256272452 Spearman Correlation: 0.5648387396756926 Coefficient of Determination: 0.3376507206713698 RMSE: 0.3663287767337246 NRMSE: 0.08803863896508643 MAPE: 712.8688351753389 Pearson Correlation: 0.5540588047355898 Spearman Correlation: 0.4174417227336003 Coefficient of Determination: 0.26895005842180686 RMSE: 0.3692058593772897 NRMSE: 0.11716357558304445 MAPE: 215.8827991337366 Protein: CTNNB1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'AKT1', 'APC2', 'APC', 'AR', 'AXIN1', 'AXIN2', 'BCL9', 'BTRC', 'CASP3', 'CBY1', 'CCND1', 'CDC73', 'CDH11', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDH5', 'CDH8', 'CHD8', 'CREBBP', 'CSNK1A1', 'CSNK1E', 'CTBP1', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNBIP1', 'CTNND1', 'DVL1', 'DVL2', 'DVL3', 'EGFR', 'EGF', 'EP300', 'ERBB2', 'AMER1', 'FBXW11', 'FER', 'FGFR1', 'FOXO1', 'FOXO3', 'FYN', 'FZD1', 'FZD2', 'FZD5', 'GSK3A', 'GSK3B', 'HNF4A', 'IGF1R', 'IQGAP1', 'JUN', 'JUP', 'KDR', 'KLF4', 'LEF1', 'LRP5', 'LRP6', 'MAPK9', 'MEN1', 'MET', 'MMP7', 'MYC', 'NLK', 'NOTCH1', 'PIK3CA', 'PIK3R1', 'PITX2', 'PSEN1', 'PTPN11', 'PTPN1', 'PYGO2', 'RUVBL1', 'SKP1', 'SMAD4', 'SMAD7', 'SMARCA4', 'SOX17', 'SOX2', 'SOX6', 'SOX9', 'SRC', 'TBL1X', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TGFBR1', 'TGFBR2', 'TJP1', 'TLE1', 'VCL', 'VEGFA', 'WNT1', 'WNT3A', 'WNT8A', 'WNT8B', 'YWHAZ', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.6765721484765087 Spearman Correlation: 0.6544306788468376 Coefficient of Determination: 0.4577498720941189 RMSE: 0.5238778929236754 NRMSE: 0.12652832888698565 MAPE: 384.9961841054911 Pearson Correlation: 0.2680839469649284 Spearman Correlation: 0.35945834736093973 Coefficient of Determination: -0.29980315707023597 RMSE: 0.9148693610995781 NRMSE: 0.19234491655444833 MAPE: 812.4894971280617 Predictor: ElasticNet Pearson Correlation: 0.4508724884688615 Spearman Correlation: 0.44045310077538113 Coefficient of Determination: 0.060635856262816534 RMSE: 0.6895205750817939 NRMSE: 0.16653477323007293 MAPE: 681.663880518016 Pearson Correlation: 0.414800061644396 Spearman Correlation: 0.3498223169864961 Coefficient of Determination: -0.08574540388266194 RMSE: 0.836150183507268 NRMSE: 0.17579475727593727 MAPE: 853.2979763033902 Predictor: RandomForests Pearson Correlation: 0.6298361851047681 Spearman Correlation: 0.6034829557413277 Coefficient of Determination: 0.38525123555487584 RMSE: 0.5578007229258137 NRMSE: 0.13472145757072113 MAPE: 462.6803024204656 Pearson Correlation: 0.6869391646082794 Spearman Correlation: 0.46173892442549164 Coefficient of Determination: 0.31216754394539836 RMSE: 0.6655207824715764 NRMSE: 0.13992111312580446 MAPE: 582.5516266649797 Protein: CCNE1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['ABL1', 'BARD1', 'BRCA1', 'CABLES1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNH', 'CCT2', 'CCT3', 'CCT4', 'CCT6A', 'CCT7', 'CDC25A', 'CDC6', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDT1', 'CKS1B', 'CKS2', 'CUL1', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'EP400', 'FOXM1', 'HDAC1', 'IFNAR1', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'MNAT1', 'MYC', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PCNA', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB7', 'PSMC1', 'PSMC2', 'PSMC4', 'PSMC5', 'PSMD10', 'PSMD11', 'PSMD14', 'PSMD1', 'PSMD3', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSME3', 'PTK6', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RHOA', 'RPS27A', 'RRN3', 'SKP1', 'SKP2', 'STAT5A', 'STAT5B', 'TCP1', 'TFDP1', 'TP53', 'TP73', 'UBB', 'UBC', 'WEE1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.8820824089641275 Spearman Correlation: 0.6787743596799631 Coefficient of Determination: 0.7780693762039579 RMSE: 0.2378108702609133 NRMSE: 0.05739094776670929 MAPE: 51.625127606464105 Pearson Correlation: 0.776937160264316 Spearman Correlation: 0.636549084153169 Coefficient of Determination: 0.5976084252785827 RMSE: 0.28678171353158194 NRMSE: 0.11702510141662531 MAPE: 61.539406744648105 Predictor: ElasticNet Pearson Correlation: 0.6779938834004191 Spearman Correlation: 0.6095967274254626 Coefficient of Determination: 0.31322954085796695 RMSE: 0.4183395147475037 NRMSE: 0.10095796383606528 MAPE: 77.26263995538424 Pearson Correlation: 0.6524583300303074 Spearman Correlation: 0.5640344642701282 Coefficient of Determination: 0.2958199657226461 RMSE: 0.37937514075468676 NRMSE: 0.15480908379771763 MAPE: 103.46166452097907 Predictor: RandomForests Pearson Correlation: 0.8565870302724811 Spearman Correlation: 0.7165380852645807 Coefficient of Determination: 0.7296686800316297 RMSE: 0.26246492132105786 NRMSE: 0.06334071513889951 MAPE: 55.385584777179474 Pearson Correlation: 0.8423483880610949 Spearman Correlation: 0.7087570314332251 Coefficient of Determination: 0.7005549918089391 RMSE: 0.24739194483907934 NRMSE: 0.10095158117974348 MAPE: 74.36074031684599 Protein: CCND1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ACTL6A', 'AKT1', 'ARID1A', 'ARID2', 'AR', 'ATF2', 'BRD2', 'BTG2', 'CCNA1', 'CCNB1', 'CCNE1', 'CCNH', 'CDC25A', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CKS1B', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUL1', 'DNMT3A', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'AGO2', 'EP300', 'ESR1', 'FOS', 'FOXA1', 'FOXM1', 'GADD45A', 'GATA3', 'GLI1', 'GLI3', 'GSK3B', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC4', 'HIST1H2BA', 'HIST2H2BE', 'HNF1A', 'IFNAR1', 'JAK2', 'JUN', 'KAT2B', 'LEF1', 'LYN', 'MAML1', 'MYB', 'MYC', 'NOTCH1', 'PBRM1', 'PCNA', 'PRMT5', 'PSMA6', 'PSMC6', 'PSMD10', 'PSMD6', 'PSMD7', 'PSME3', 'PTK6', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RELA', 'RUNX1', 'RUNX3', 'SKP1', 'SKP2', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'SUV39H1', 'TCF7L2', 'TFDP1', 'TP53', 'WDR77', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 0.5745038038175604 Spearman Correlation: 0.5396778432288746 Coefficient of Determination: 0.3300546206008458 RMSE: 0.19669186609389477 NRMSE: 0.12566403834214665 MAPE: 572.9394168021358 Pearson Correlation: 0.3227035671474681 Spearman Correlation: 0.316440354617888 Coefficient of Determination: -0.0014348772032468649 RMSE: 0.2291660870340374 NRMSE: 0.14452957053105286 MAPE: 518.1410701654157 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: RandomForests Pearson Correlation: 0.5449419150508589 Spearman Correlation: 0.5060722495807217 Coefficient of Determination: 0.2553511196797267 RMSE: 0.20736835045187313 NRMSE: 0.13248511420239525 MAPE: 471.55277629370164 Pearson Correlation: 0.4789593490371943 Spearman Correlation: 0.43193077178093386 Coefficient of Determination: 0.20473356084489525 RMSE: 0.20421861225188792 NRMSE: 0.1287957948107265 MAPE: 474.9640282427148 Protein: ERBB2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ADAM17', 'ADRB2', 'AREG', 'ARHGEF11', 'ARHGEF12', 'BTC', 'CBL', 'CCND1', 'CD44', 'CDC37', 'CDH1', 'CTNNB1', 'CTNND1', 'CUL5', 'DIAPH1', 'DOCK7', 'EGFR', 'EGF', 'ERBB2IP', 'ERBB3', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FYN', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IL6R', 'IL6', 'INS', 'JAK1', 'JAK2', 'KRAS', 'LRPPRC', 'MAP2K1', 'MAPK8', 'MATK', 'MEMO1', 'MUC1', 'MUC4', 'MYC', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'PGAP3', 'PGR', 'PIK3CA', 'PIK3CB', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PLXNB1', 'PRKACA', 'PTEN', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'RHOA', 'RHOB', 'RHOC', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'RPS27A', 'SEMA4D', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SRC', 'STAT1', 'STAT3', 'STUB1', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TGFA', 'TP53', 'UBA52', 'UBB', 'UBC', 'VEGFA', 'YES1', 'YY1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 0.8553565258321235 Spearman Correlation: 0.7251730294326125 Coefficient of Determination: 0.7316347862835996 RMSE: 0.5081063524984163 NRMSE: 0.0865642796903447 MAPE: 475.6800976359614 Pearson Correlation: 0.7760100941603885 Spearman Correlation: 0.5734841749704267 Coefficient of Determination: 0.5643858809029019 RMSE: 0.6842106759841794 NRMSE: 0.12320572549864577 MAPE: 290.19277124545073 Predictor: ElasticNet Pearson Correlation: 0.8134349618555555 Spearman Correlation: 0.6241441772457612 Coefficient of Determination: 0.25457774755324947 RMSE: 0.8468230893704527 NRMSE: 0.14427025050180634 MAPE: 543.4975488982451 Pearson Correlation: 0.778902007845767 Spearman Correlation: 0.5846987926272861 Coefficient of Determination: 0.2071045104365935 RMSE: 0.9230959514144562 NRMSE: 0.16622176529953833 MAPE: 190.6401116046149 Predictor: RandomForests Pearson Correlation: 0.8504928402137844 Spearman Correlation: 0.6382173011711788 Coefficient of Determination: 0.7199156170936907 RMSE: 0.5190819903990866 NRMSE: 0.08843416024653503 MAPE: 441.0256879142006 Pearson Correlation: 0.7841628552095843 Spearman Correlation: 0.6794134113363717 Coefficient of Determination: 0.5622509444231605 RMSE: 0.6858852784224256 NRMSE: 0.12350727093716024 MAPE: 216.17263456060311 Protein: ERBB3 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AKT2', 'ANGPT1', 'ANGPT2', 'AREG', 'AR', 'BDNF', 'BMP4', 'BTC', 'CBLB', 'CBL', 'CCND1', 'CDH1', 'CSF1', 'CSK', 'CTNNB1', 'DCN', 'DOCK7', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FGF10', 'FGF19', 'FGF1', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FIGF', 'FLNA', 'FOXO3', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IGF1', 'IGF2', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'JAK1', 'JAK2', 'KITLG', 'KRAS', 'LAMA1', 'LAMB1', 'LAMC2', 'MAP2K1', 'MAPK8', 'MET', 'MUC4', 'NGF', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NTF3', 'PA2G4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PRKACA', 'PTEN', 'PTPN11', 'RNF41', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SOX10', 'SRC', 'TGFA', 'VEGFA', 'VEGFB', 'VEGFC', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.5911038471831644 Spearman Correlation: 0.5885325215651557 Coefficient of Determination: 0.3494037581547377 RMSE: 0.38532343191608925 NRMSE: 0.10536051775163152 MAPE: 220.02783685246982 Pearson Correlation: 0.2887342290155553 Spearman Correlation: 0.3027095100936421 Coefficient of Determination: -0.20059790524331156 RMSE: 0.4213921196595743 NRMSE: 0.2074116956294941 MAPE: 233.3912755906838 Predictor: ElasticNet Pearson Correlation: 0.44570842456558873 Spearman Correlation: 0.47564008650663203 Coefficient of Determination: 0.06814265468017433 RMSE: 0.46115228087573484 NRMSE: 0.126094701362449 MAPE: 229.68868444457283 Pearson Correlation: 0.34367956141714184 Spearman Correlation: 0.32135313407897853 Coefficient of Determination: 0.0563734484927817 RMSE: 0.37358350751539654 NRMSE: 0.18388001374012342 MAPE: 213.6406102807089 Predictor: RandomForests Pearson Correlation: 0.5547876126766105 Spearman Correlation: 0.5902516503880699 Coefficient of Determination: 0.2910243708930592 RMSE: 0.4022400388108429 NRMSE: 0.10998609282286206 MAPE: 238.34134072195064 Pearson Correlation: 0.42628279500567845 Spearman Correlation: 0.3530692402648412 Coefficient of Determination: 0.16742561662904665 RMSE: 0.3509127445071989 NRMSE: 0.17272132999315779 MAPE: 242.66558427817895 Fold: 5 Protein: RB1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AATF', 'ABL1', 'AKT1', 'AR', 'ASF1A', 'ATF2', 'BGLAP', 'CASP3', 'CBX4', 'CCNA1', 'CCNA2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CEBPA', 'COL1A1', 'CREBBP', 'CTBP1', 'DNMT1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'ELF1', 'EP300', 'FOXM1', 'FZR1', 'GNB2L1', 'H1F0', 'H2AFV', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HIST1H2BA', 'HIST2H2AC', 'HIST2H2BE', 'HMGA1', 'HMGA2', 'HSP90AA1', 'ID2', 'JUN', 'MAPK14', 'MAPK1', 'MAPK3', 'MDM2', 'MEF2C', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NFYC', 'PCNA', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP2CA', 'PPP2CB', 'PRIM1', 'PRIM2', 'RAF1', 'RBBP4', 'RUNX2', 'SIRT1', 'SKP2', 'SMARCA2', 'SMC2', 'SMC4', 'SP100', 'SP1', 'SP3', 'SPI1', 'SUV39H1', 'TAF1', 'TBP', 'TERT', 'TFDP1', 'TP53BP1', 'TP53', 'TP73', 'YAP1', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.5069043132899447 Spearman Correlation: 0.4933311406845556 Coefficient of Determination: 0.25695198283195053 RMSE: 0.20162670996648344 NRMSE: 0.09960662077258188 MAPE: 335.851066356648 Pearson Correlation: 0.1321250500439352 Spearman Correlation: 0.0680781555879749 Coefficient of Determination: -0.952811908142452 RMSE: 0.33589968237517615 NRMSE: 0.1693623229610835 MAPE: 665.3429629554579 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: RandomForests Pearson Correlation: 0.5510514394759319 Spearman Correlation: 0.48981283330666364 Coefficient of Determination: 0.16481628290012207 RMSE: 0.21376206347840973 NRMSE: 0.10560166753699417 MAPE: 151.14884520496926 Pearson Correlation: 0.02605859379354594 Spearman Correlation: 0.12342049152732579 Coefficient of Determination: -0.1357599151765001 RMSE: 0.2561666885759467 NRMSE: 0.12916054321841494 MAPE: 299.5254744685065 Protein: CDH1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ACTA1', 'ACTN1', 'ADAM10', 'ADAM15', 'CA2', 'CASP3', 'CBLL1', 'CDC42', 'CDH17', 'CDH3', 'CDH5', 'CTBP1', 'CTNNA1', 'CTNNB1', 'CTNND1', 'CTTN', 'DLG1', 'EFNA1', 'EGFR', 'EGF', 'ENAH', 'EPCAM', 'EPHA2', 'EXOC3', 'EXOC4', 'FER', 'FLOT1', 'FLOT2', 'FMN1', 'FYN', 'GDNF', 'GNA12', 'GNA13', 'HGF', 'HGS', 'IGF1R', 'IGF1', 'IGF2', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'ITGA6', 'ITGAE', 'ITGB4', 'ITGB7', 'AJUBA', 'JUP', 'KIFC3', 'KLK7', 'KLRG1', 'LAMB1', 'LAMC2', 'LIMA1', 'MAPK1', 'MAPK3', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MLLT4', 'MMP3', 'MMP7', 'MMP9', 'MYO6', 'NCSTN', 'NUMB', 'PARD6A', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PLEKHA7', 'PLG', 'PRKCI', 'PRKCZ', 'PSEN1', 'PVRL1', 'PVRL2', 'RAB5A', 'RAB7A', 'RAC1', 'RAP1A', 'RET', 'RHOA', 'SKIL', 'SMAD3', 'SMAD4', 'SNAI1', 'SNAI2', 'SNAI3', 'SRC', 'STX4', 'TJP1', 'TWIST1', 'VASP', 'VCL', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.7669918179182278 Spearman Correlation: 0.720670930490041 Coefficient of Determination: 0.5882764487535077 RMSE: 0.7225523535540025 NRMSE: 0.11505244316327544 MAPE: 255.1832494596763 Pearson Correlation: 0.45532449682320464 Spearman Correlation: 0.4506415291961246 Coefficient of Determination: 0.1242957950074246 RMSE: 1.087152752229838 NRMSE: 0.2137918137755085 MAPE: 1771.7895912821348 Predictor: ElasticNet Pearson Correlation: 0.6700090668900847 Spearman Correlation: 0.6369185542589446 Coefficient of Determination: 0.34073488816811437 RMSE: 0.9143164042597903 NRMSE: 0.14558714758443844 MAPE: 187.70765404271037 Pearson Correlation: 0.47367029107809117 Spearman Correlation: 0.51667726530256 Coefficient of Determination: 0.1833004660690224 RMSE: 1.049888082456002 NRMSE: 0.20646360591846807 MAPE: 832.263709826612 Predictor: RandomForests Pearson Correlation: 0.7799313376460936 Spearman Correlation: 0.7090491909145105 Coefficient of Determination: 0.6035252887651239 RMSE: 0.7090456724260381 NRMSE: 0.11290176625362855 MAPE: 143.65822804362995 Pearson Correlation: 0.6325713228980736 Spearman Correlation: 0.5790421326949216 Coefficient of Determination: 0.39036844945245475 RMSE: 0.9070799546337237 NRMSE: 0.1783799639404778 MAPE: 391.78972810588476 Protein: CDH2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ADAM10', 'AFP', 'AHSG', 'ALB', 'APLP2', 'APOA1', 'APOB', 'APOE', 'APP', 'AXIN1', 'BDNF', 'BMP4', 'BNIP2', 'CALU', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH17', 'CDH18', 'CDH1', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDON', 'CREBBP', 'CSF1', 'CST3', 'CTNNA1', 'CTNNA2', 'CTNNB1', 'CTNND1', 'CYR61', 'FAM20C', 'FBN1', 'FER', 'FGFR1', 'FN1', 'FSTL1', 'GAS6', 'GJA1', 'GOLM1', 'GPC3', 'GRIA2', 'HSP90B1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL6', 'ITIH2', 'JUP', 'KIF5B', 'KNG1', 'KTN1', 'LAMB1', 'LAMC1', 'LGALS1', 'LRP5', 'LTBP1', 'MAP2K6', 'MAPK11', 'MAPK14', 'MATN3', 'MEF2A', 'MEF2C', 'MEF2D', 'MET', 'MFGE8', 'MSLN', 'NTRK2', 'P4HB', 'PCSK9', 'PIK3CA', 'PIK3R1', 'PTPN11', 'PTPN1', 'RAC1', 'RHOA', 'ROBO1', 'SCG2', 'SDC2', 'SERPINA1', 'SLIT1', 'SNAI1', 'SNAI2', 'SPAG9', 'SPARCL1', 'SPP1', 'STC2', 'TCF3', 'TIMP1', 'TMEM132A', 'TNC', 'VCAN', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.5556584265961241 Spearman Correlation: 0.5213035770127588 Coefficient of Determination: 0.3087562870472801 RMSE: 0.2985898428211713 NRMSE: 0.146647926340146 MAPE: 654.222329029096 Pearson Correlation: 0.025332876905473187 Spearman Correlation: 0.017698497111570153 Coefficient of Determination: -0.500551231293026 RMSE: 0.5109246194136265 NRMSE: 0.1910605685595896 MAPE: 1789.4323099309318 Predictor: ElasticNet Pearson Correlation: 0.17449404408831024 Spearman Correlation: 0.17373365666170454 Coefficient of Determination: 0.000378320400970078 RMSE: 0.3590684659357265 NRMSE: 0.17635109569064705 MAPE: 196.58522501894112 Pearson Correlation: -0.006867263096900187 Spearman Correlation: -0.05665913123501111 Coefficient of Determination: -0.015500864996650598 RMSE: 0.4203117829972017 NRMSE: 0.15717584391197265 MAPE: 598.241230985296 Predictor: RandomForests Pearson Correlation: 0.5285637165501145 Spearman Correlation: 0.5013115821333234 Coefficient of Determination: 0.18513038283366956 RMSE: 0.3241928972348436 NRMSE: 0.1592224828028307 MAPE: 614.3664363558341 Pearson Correlation: -0.0009606234420610378 Spearman Correlation: 0.05920530082088023 Coefficient of Determination: -0.043030332517606906 RMSE: 0.4259708549107756 NRMSE: 0.15929205725586656 MAPE: 746.8766141129609 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.5673091310268191 Spearman Correlation: 0.5626739259885083 Coefficient of Determination: 0.3218396501464047 RMSE: 0.1678037765176248 NRMSE: 0.11772729452041926 MAPE: 709.9636165398703 Pearson Correlation: 0.3311861135941639 Spearman Correlation: 0.42593299168318816 Coefficient of Determination: -0.15607735928306377 RMSE: 0.24019355052723323 NRMSE: 0.21670490578878665 MAPE: 496.547590583947 Predictor: ElasticNet Pearson Correlation: 0.3318604773889917 Spearman Correlation: 0.38172853614085894 Coefficient of Determination: 0.0035206132399563383 RMSE: 0.20340877914422772 NRMSE: 0.14270695062596658 MAPE: 136.92678760887392 Pearson Correlation: 0.36115887394931395 Spearman Correlation: 0.37482013491440047 Coefficient of Determination: -0.003681989712543521 RMSE: 0.2238030286986052 NRMSE: 0.20191722110322646 MAPE: 107.69315780126504 Predictor: RandomForests Pearson Correlation: 0.5532215556161209 Spearman Correlation: 0.5652630676722618 Coefficient of Determination: 0.26825766681949326 RMSE: 0.17430691798156686 NRMSE: 0.1222897499449731 MAPE: 575.6799278137305 Pearson Correlation: 0.4392656012482198 Spearman Correlation: 0.4789660718961583 Coefficient of Determination: 0.17143896120733582 RMSE: 0.20334343131470894 NRMSE: 0.18345837775034865 MAPE: 212.27010258558812 Protein: PTEN Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AR', 'BCR', 'CD79A', 'CD79B', 'CDIPT', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'DLG1', 'EGFR', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'FOXO3', 'FOXO4', 'FRK', 'GRB2', 'HRAS', 'INPP4A', 'INPP4B', 'INPP5B', 'INPP5D', 'INPP5J', 'INPP5K', 'INPPL1', 'IPMK', 'IRS1', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'MAST2', 'MDM2', 'MDM4', 'MKRN1', 'MTOR', 'MYC', 'NEDD4', 'NOTCH1', 'OCRL', 'OTUD3', 'PARK7', 'PDGFB', 'PDGFRB', 'PI4K2A', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIKFYVE', 'PIP4K2A', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PML', 'PREX2', 'PSMA6', 'PSMA7', 'PSMB9', 'PSMC6', 'PSMD10', 'PSMD5', 'PSME3', 'PTK2', 'RICTOR', 'RNF146', 'ROCK1', 'ROCK2', 'RPS27A', 'RPS6KB1', 'SACM1L', 'SHC1', 'SLC9A3R1', 'SLC9A3R2', 'SOS1', 'STK11', 'STUB1', 'SYNJ1', 'SYNJ2', 'TNKS2', 'TNKS', 'TNRC6A', 'TNRC6B', 'TP53', 'UBB', 'UBC', 'USP13', 'USP7', 'WWP2', 'XIAP', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 0.5881174469723213 Spearman Correlation: 0.5586848407350578 Coefficient of Determination: 0.3458821314332412 RMSE: 0.4602155827058249 NRMSE: 0.07195928116735593 MAPE: 723.8950899290603 Pearson Correlation: 0.3448527274870976 Spearman Correlation: 0.3926906819287024 Coefficient of Determination: 0.06450642308344356 RMSE: 0.6980392458099159 NRMSE: 0.13502770926375657 MAPE: 491.00478696539795 Predictor: ElasticNet Pearson Correlation: 0.3454025625790254 Spearman Correlation: 0.406637491543012 Coefficient of Determination: 0.03432321299431018 RMSE: 0.5591768832860314 NRMSE: 0.08743286424611546 MAPE: 296.86825360411706 Pearson Correlation: 0.3305792812942853 Spearman Correlation: 0.44255664035711173 Coefficient of Determination: 0.017889728218861256 RMSE: 0.7152198550051183 NRMSE: 0.13835110163361156 MAPE: 385.86435181734976 Predictor: RandomForests Pearson Correlation: 0.5382352941738403 Spearman Correlation: 0.49365191412785264 Coefficient of Determination: 0.2645819655510754 RMSE: 0.48797823405101676 NRMSE: 0.07630024768212286 MAPE: 299.0596825838686 Pearson Correlation: 0.439603663309399 Spearman Correlation: 0.45668877013383724 Coefficient of Determination: 0.16600123407524892 RMSE: 0.6590860803901359 NRMSE: 0.12749266488512379 MAPE: 346.11339098639877 Protein: BRCA2 Protein Interaction Partners Count: 100 x_train_column_count: 99 x_train columns: ['ATM', 'ATRIP', 'ATR', 'BARD1', 'BLM', 'BRCA1', 'BRIP1', 'SLX4', 'RHNO1', 'RMI2', 'CDK2', 'CDK4', 'CHEK1', 'CHEK2', 'DMC1', 'DNA2', 'EME1', 'EME2', 'EXO1', 'FANCD2', 'FANCE', 'FANCG', 'FANCI', 'GEN1', 'H2AFX', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HUS1', 'KAT5', 'SPIDR', 'MLH1', 'MLH3', 'MND1', 'MRE11A', 'MSH4', 'MSH5', 'MUS81', 'NBN', 'PALB2', 'PARP1', 'PCNA', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'PSMC3IP', 'RAD17', 'RAD1', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD9A', 'RAD9B', 'RBBP8', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SPO11', 'SYCP3', 'TEX15', 'TOP3A', 'TOPBP1', 'TP53', 'UBA52', 'UBB', 'UBC', 'WRN', 'XRCC2', 'XRCC3', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.5283753109822056 Spearman Correlation: 0.47990150495199674 Coefficient of Determination: 0.2791804692555424 RMSE: 0.170199690265634 NRMSE: 0.10964708665848544 MAPE: 262.23714076170705 Pearson Correlation: -0.034783854304861236 Spearman Correlation: 0.16798962580580806 Coefficient of Determination: -3.9383149907867603 RMSE: 0.36908507624787296 NRMSE: 0.48268498822712735 MAPE: 366.28495746574356 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: RandomForests Pearson Correlation: 0.5357843471418386 Spearman Correlation: 0.4450225492735351 Coefficient of Determination: 0.1737033646751981 RMSE: 0.18222731864142386 NRMSE: 0.11739559906034715 MAPE: 172.61860055586232 Pearson Correlation: 0.1583917764429902 Spearman Correlation: 0.11850771206623525 Coefficient of Determination: -0.057596239752407685 RMSE: 0.17080360790814153 NRMSE: 0.22337488773705816 MAPE: 163.95608134749864 Protein: CDKN2A Protein Interaction Partners Count: 100 x_train_column_count: 100 x_train columns: ['ABL1', 'AKT1', 'ARF1', 'BMI1', 'BRCA1', 'CBX7', 'CCND1', 'CCND2', 'CCND3', 'CCNL1', 'CDC45', 'CDC6', 'CDC7', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPB', 'CTCF', 'DAXX', 'E2F1', 'E2F2', 'E2F3', 'EGFR', 'EGR1', 'AGO1', 'AGO3', 'AGO4', 'ERBB2', 'EZH2', 'FOXM1', 'GMNN', 'HDAC1', 'HIF1A', 'HRAS', 'HUWE1', 'IL6', 'KRAS', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAX', 'MCM10', 'MCM2', 'MCM5', 'MDM2', 'MDM4', 'MGMT', 'MLH1', 'MOV10', 'MRAS', 'MTAP', 'MYCN', 'MYC', 'NPM1', 'NRAS', 'ORC5', 'PIK3CA', 'PIK3R1', 'PTEN', 'RASSF1', 'RB1', 'RPS27A', 'RRAS2', 'RRAS', 'RUNX3', 'SMAD3', 'SMAD4', 'SMARCA4', 'SUMO1', 'SUMO2', 'SUMO3', 'TBX2', 'TERT', 'TFDP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TP53', 'TP63', 'TRIP12', 'TWIST1', 'UBA52', 'UBB', 'UBC', 'UBE2I', 'USP7', 'VEGFA', 'WRN', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 0.7425365803297135 Spearman Correlation: 0.6828404953202836 Coefficient of Determination: 0.5513605731277443 RMSE: 0.4552584123388293 NRMSE: 0.1159273795775074 MAPE: 252.29880528087273 Pearson Correlation: 0.40856772871165575 Spearman Correlation: 0.42302023716006437 Coefficient of Determination: 0.042432367864164156 RMSE: 0.5929541939518608 NRMSE: 0.1492046485875697 MAPE: 386.89826308444003 Predictor: ElasticNet Pearson Correlation: 0.5486451980952844 Spearman Correlation: 0.35062284158727786 Coefficient of Determination: 0.12772131977172863 RMSE: 0.6347999587123495 NRMSE: 0.161645987805849 MAPE: 222.16628614552064 Pearson Correlation: 0.3430669858285682 Spearman Correlation: 0.2380054614147309 Coefficient of Determination: 0.07640891499755353 RMSE: 0.5823395446036947 NRMSE: 0.1465336918053634 MAPE: 264.203140326708 Predictor: RandomForests Pearson Correlation: 0.7070760359539651 Spearman Correlation: 0.6156068997241199 Coefficient of Determination: 0.495831069043139 RMSE: 0.48261109340110386 NRMSE: 0.12289248896160115 MAPE: 196.31830226324485 Pearson Correlation: 0.38271414956951605 Spearman Correlation: 0.365257964819361 Coefficient of Determination: -0.027691046414497933 RMSE: 0.6142818772439601 NRMSE: 0.154571318598918 MAPE: 458.3069491129188 Protein: TP53 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AKT1', 'APAF1', 'ATM', 'ATR', 'AURKA', 'AURKB', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2L1', 'BCL2', 'BCL6', 'BRCA1', 'CASP8', 'CCNA2', 'CCNE1', 'CCNG1', 'CDC25C', 'CDK2', 'CDK5', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CHEK1', 'CHEK2', 'COPS5', 'CREBBP', 'DDB2', 'DDX5', 'DYRK2', 'E2F4', 'EGR1', 'EHMT2', 'EP300', 'EZH2', 'FZR1', 'GADD45A', 'GLS2', 'GSK3B', 'HDAC1', 'HDAC2', 'HIF1A', 'HIPK2', 'HSP90AA1', 'HSPA1A', 'IGFBP3', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'MAPK14', 'MAPK1', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MCL1', 'MDM2', 'MDM4', 'MSH2', 'NGFR', 'NPM1', 'PLK3', 'PMAIP1', 'PPP1R13B', 'PPP1R13L', 'PRKDC', 'PRMT5', 'PTEN', 'RB1', 'RCHY1', 'DROSHA', 'RPA1', 'RRM2B', 'SETD7', 'SETD8', 'SFN', 'SIRT1', 'SMYD2', 'SNAI1', 'SNAI2', 'SP1', 'STAT3', 'STK11', 'SUMO1', 'SUMO2', 'TBP', 'TNFRSF10A', 'TNFRSF10B', 'TP53BP1', 'TP53BP2', 'TP53INP1', 'TP53RK', 'TXN', 'UBE2I', 'USP7', 'WRN', 'XRCC6', 'YY1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.6738138093178626 Spearman Correlation: 0.6342899958074839 Coefficient of Determination: 0.4540250496274493 RMSE: 0.31314109830287173 NRMSE: 0.07964116541694137 MAPE: 961.264596168487 Pearson Correlation: 0.43038602246336427 Spearman Correlation: 0.31346276138106466 Coefficient of Determination: 0.15603913228768096 RMSE: 0.48519350402240835 NRMSE: 0.12995674407992724 MAPE: 247.9918417207268 Predictor: ElasticNet Pearson Correlation: 0.41937598371555945 Spearman Correlation: 0.43186394655434013 Coefficient of Determination: 0.13911549736488926 RMSE: 0.3932114509126442 NRMSE: 0.10000545560991994 MAPE: 637.8801043508881 Pearson Correlation: 0.43560576545881674 Spearman Correlation: 0.40333420616217164 Coefficient of Determination: 0.12318107483915708 RMSE: 0.4945483761865407 NRMSE: 0.13246240154989708 MAPE: 164.40245366660307 Predictor: RandomForests Pearson Correlation: 0.6316797160440648 Spearman Correlation: 0.562487239141467 Coefficient of Determination: 0.34963697457635856 RMSE: 0.3417681858048986 NRMSE: 0.08692189165667963 MAPE: 737.5776386594723 Pearson Correlation: 0.5373916819353073 Spearman Correlation: 0.46615793214379236 Coefficient of Determination: 0.2461220782133937 RMSE: 0.45856862270338944 NRMSE: 0.12282539780457732 MAPE: 181.77701701915015 Protein: CTNNB1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'AKT1', 'APC2', 'APC', 'AR', 'AXIN1', 'AXIN2', 'BCL9', 'BTRC', 'CASP3', 'CBY1', 'CCND1', 'CDC73', 'CDH11', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDH5', 'CDH8', 'CHD8', 'CREBBP', 'CSNK1A1', 'CSNK1E', 'CTBP1', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNBIP1', 'CTNND1', 'DVL1', 'DVL2', 'DVL3', 'EGFR', 'EGF', 'EP300', 'ERBB2', 'AMER1', 'FBXW11', 'FER', 'FGFR1', 'FOXO1', 'FOXO3', 'FYN', 'FZD1', 'FZD2', 'FZD5', 'GSK3A', 'GSK3B', 'HNF4A', 'IGF1R', 'IQGAP1', 'JUN', 'JUP', 'KDR', 'KLF4', 'LEF1', 'LRP5', 'LRP6', 'MAPK9', 'MEN1', 'MET', 'MMP7', 'MYC', 'NLK', 'NOTCH1', 'PIK3CA', 'PIK3R1', 'PITX2', 'PSEN1', 'PTPN11', 'PTPN1', 'PYGO2', 'RUVBL1', 'SKP1', 'SMAD4', 'SMAD7', 'SMARCA4', 'SOX17', 'SOX2', 'SOX6', 'SOX9', 'SRC', 'TBL1X', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TGFBR1', 'TGFBR2', 'TJP1', 'TLE1', 'VCL', 'VEGFA', 'WNT1', 'WNT3A', 'WNT8A', 'WNT8B', 'YWHAZ', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.6526406893436889 Spearman Correlation: 0.6267146051743737 Coefficient of Determination: 0.42593986938700557 RMSE: 0.5727821233764399 NRMSE: 0.11266367493635718 MAPE: 384.1475462062328 Pearson Correlation: 0.4531542645988593 Spearman Correlation: 0.48742503023728484 Coefficient of Determination: 0.11211316467729582 RMSE: 0.6385416144795081 NRMSE: 0.2045041184731914 MAPE: 274.78870185729227 Predictor: ElasticNet Pearson Correlation: 0.4504802611772915 Spearman Correlation: 0.44463032041578465 Coefficient of Determination: 0.06518049006240945 RMSE: 0.7309280795699897 NRMSE: 0.1437702752891404 MAPE: 772.5595394441686 Pearson Correlation: 0.44040174360739953 Spearman Correlation: 0.4073841319717204 Coefficient of Determination: 0.06413983090174913 RMSE: 0.6555651819669897 NRMSE: 0.20995621365908473 MAPE: 268.5455506373988 Predictor: RandomForests Pearson Correlation: 0.6500198031853741 Spearman Correlation: 0.6118736664069518 Coefficient of Determination: 0.4116050738445375 RMSE: 0.5798894690380171 NRMSE: 0.11406165795397662 MAPE: 450.9043588685739 Pearson Correlation: 0.6449716017629087 Spearman Correlation: 0.5524033965510792 Coefficient of Determination: 0.4093656974223425 RMSE: 0.5207985071329085 NRMSE: 0.16679482932398212 MAPE: 189.51992936304015 Protein: CCNE1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['ABL1', 'BARD1', 'BRCA1', 'CABLES1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNH', 'CCT2', 'CCT3', 'CCT4', 'CCT6A', 'CCT7', 'CDC25A', 'CDC6', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDT1', 'CKS1B', 'CKS2', 'CUL1', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'EP400', 'FOXM1', 'HDAC1', 'IFNAR1', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'MNAT1', 'MYC', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PCNA', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB7', 'PSMC1', 'PSMC2', 'PSMC4', 'PSMC5', 'PSMD10', 'PSMD11', 'PSMD14', 'PSMD1', 'PSMD3', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSME3', 'PTK6', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RHOA', 'RPS27A', 'RRN3', 'SKP1', 'SKP2', 'STAT5A', 'STAT5B', 'TCP1', 'TFDP1', 'TP53', 'TP73', 'UBB', 'UBC', 'WEE1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.8760919073932412 Spearman Correlation: 0.7143342518518204 Coefficient of Determination: 0.7675370301999275 RMSE: 0.21638295783039596 NRMSE: 0.07707318177396116 MAPE: 43.93182701718325 Pearson Correlation: 0.8453919758325694 Spearman Correlation: 0.6564196561054377 Coefficient of Determination: 0.6686447678442666 RMSE: 0.373066562774435 NRMSE: 0.09003223273268697 MAPE: 86.88761697586968 Predictor: ElasticNet Pearson Correlation: 0.6786428111316073 Spearman Correlation: 0.5782339862525852 Coefficient of Determination: 0.30081497663340173 RMSE: 0.3752685945302381 NRMSE: 0.13366646287809014 MAPE: 85.85396568028375 Pearson Correlation: 0.6320216678301089 Spearman Correlation: 0.6599558597987507 Coefficient of Determination: 0.20033102907015354 RMSE: 0.5795548330616574 NRMSE: 0.1398640908033056 MAPE: 100.00439213968156 Predictor: RandomForests Pearson Correlation: 0.8609336470602248 Spearman Correlation: 0.7122151343323968 Coefficient of Determination: 0.7389225050321655 RMSE: 0.22931416406891622 NRMSE: 0.08167913234867898 MAPE: 55.15936379531276 Pearson Correlation: 0.7842409547452408 Spearman Correlation: 0.7298882776945675 Coefficient of Determination: 0.5852977132552424 RMSE: 0.4173569256533583 NRMSE: 0.10072083540153928 MAPE: 77.16026044557881 Protein: CCND1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ACTL6A', 'AKT1', 'ARID1A', 'ARID2', 'AR', 'ATF2', 'BRD2', 'BTG2', 'CCNA1', 'CCNB1', 'CCNE1', 'CCNH', 'CDC25A', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CKS1B', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUL1', 'DNMT3A', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'AGO2', 'EP300', 'ESR1', 'FOS', 'FOXA1', 'FOXM1', 'GADD45A', 'GATA3', 'GLI1', 'GLI3', 'GSK3B', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC4', 'HIST1H2BA', 'HIST2H2BE', 'HNF1A', 'IFNAR1', 'JAK2', 'JUN', 'KAT2B', 'LEF1', 'LYN', 'MAML1', 'MYB', 'MYC', 'NOTCH1', 'PBRM1', 'PCNA', 'PRMT5', 'PSMA6', 'PSMC6', 'PSMD10', 'PSMD6', 'PSMD7', 'PSME3', 'PTK6', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RELA', 'RUNX1', 'RUNX3', 'SKP1', 'SKP2', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'SUV39H1', 'TCF7L2', 'TFDP1', 'TP53', 'WDR77', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.5816370010811139 Spearman Correlation: 0.5651662293506254 Coefficient of Determination: 0.33830160102663165 RMSE: 0.18515613714965792 NRMSE: 0.11662056406181216 MAPE: 486.9800805325132 Pearson Correlation: 0.20718830442196579 Spearman Correlation: 0.14077232883203034 Coefficient of Determination: -0.42752475872445483 RMSE: 0.3297131735078069 NRMSE: 0.21064973199154552 MAPE: 242.83042071105706 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: RandomForests Pearson Correlation: 0.5428070515055692 Spearman Correlation: 0.5335194938329567 Coefficient of Determination: 0.27263842597056254 RMSE: 0.194125794723969 NRMSE: 0.1222701014839067 MAPE: 489.3038396845265 Pearson Correlation: 0.3811792653654746 Spearman Correlation: 0.3078528704352158 Coefficient of Determination: 0.1401457542174439 RMSE: 0.25589210970831416 NRMSE: 0.1634863531697232 MAPE: 237.6147777677394 Protein: ERBB2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ADAM17', 'ADRB2', 'AREG', 'ARHGEF11', 'ARHGEF12', 'BTC', 'CBL', 'CCND1', 'CD44', 'CDC37', 'CDH1', 'CTNNB1', 'CTNND1', 'CUL5', 'DIAPH1', 'DOCK7', 'EGFR', 'EGF', 'ERBB2IP', 'ERBB3', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FYN', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IL6R', 'IL6', 'INS', 'JAK1', 'JAK2', 'KRAS', 'LRPPRC', 'MAP2K1', 'MAPK8', 'MATK', 'MEMO1', 'MUC1', 'MUC4', 'MYC', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'PGAP3', 'PGR', 'PIK3CA', 'PIK3CB', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PLXNB1', 'PRKACA', 'PTEN', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'RHOA', 'RHOB', 'RHOC', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'RPS27A', 'SEMA4D', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SRC', 'STAT1', 'STAT3', 'STUB1', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TGFA', 'TP53', 'UBA52', 'UBB', 'UBC', 'VEGFA', 'YES1', 'YY1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.8596579690283963 Spearman Correlation: 0.7133662857427328 Coefficient of Determination: 0.7390118237140273 RMSE: 0.5251336804664478 NRMSE: 0.08946516524974833 MAPE: 582.3846696775415 Pearson Correlation: 0.7137535356492068 Spearman Correlation: 0.5253307397847853 Coefficient of Determination: 0.4416546004644708 RMSE: 0.6483824015193035 NRMSE: 0.1434633037989387 MAPE: 449.4510032715523 Predictor: ElasticNet Pearson Correlation: 0.8144005826538494 Spearman Correlation: 0.6232708037964065 Coefficient of Determination: 0.2836097210508196 RMSE: 0.870030142567774 NRMSE: 0.14822395396149277 MAPE: 592.8733201539671 Pearson Correlation: 0.745337428881241 Spearman Correlation: 0.6185837728649983 Coefficient of Determination: 0.2541504945218661 RMSE: 0.749385612249827 NRMSE: 0.1658116190396785 MAPE: 488.4588659454508 Predictor: RandomForests Pearson Correlation: 0.8487699496163195 Spearman Correlation: 0.6734187187054156 Coefficient of Determination: 0.7161525210070727 RMSE: 0.5476485950410649 NRMSE: 0.09330095150366542 MAPE: 550.5553700816313 Pearson Correlation: 0.7915169947548313 Spearman Correlation: 0.6122250212787255 Coefficient of Determination: 0.6134685784680436 RMSE: 0.5394760258759528 NRMSE: 0.11936630730743507 MAPE: 275.42405340912677 Protein: ERBB3 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AKT2', 'ANGPT1', 'ANGPT2', 'AREG', 'AR', 'BDNF', 'BMP4', 'BTC', 'CBLB', 'CBL', 'CCND1', 'CDH1', 'CSF1', 'CSK', 'CTNNB1', 'DCN', 'DOCK7', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FGF10', 'FGF19', 'FGF1', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FIGF', 'FLNA', 'FOXO3', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IGF1', 'IGF2', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'JAK1', 'JAK2', 'KITLG', 'KRAS', 'LAMA1', 'LAMB1', 'LAMC2', 'MAP2K1', 'MAPK8', 'MET', 'MUC4', 'NGF', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NTF3', 'PA2G4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PRKACA', 'PTEN', 'PTPN11', 'RNF41', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SOX10', 'SRC', 'TGFA', 'VEGFA', 'VEGFB', 'VEGFC', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.5705228363124806 Spearman Correlation: 0.5611925319872195 Coefficient of Determination: 0.3254963067540376 RMSE: 0.38510739268551414 NRMSE: 0.10392943207893038 MAPE: 217.33512728219756 Pearson Correlation: 0.42946924097236167 Spearman Correlation: 0.38953353533086454 Coefficient of Determination: 0.061522102665400036 RMSE: 0.4039394419672265 NRMSE: 0.19543817710477177 MAPE: 298.63228587808084 Predictor: ElasticNet Pearson Correlation: 0.3899173953190927 Spearman Correlation: 0.41446098925792246 Coefficient of Determination: 0.0471261019411785 RMSE: 0.4577279210660402 NRMSE: 0.12352762836186508 MAPE: 241.42471690956216 Pearson Correlation: 0.5289709748967032 Spearman Correlation: 0.5622239678798988 Coefficient of Determination: 0.021167382440163807 RMSE: 0.41253277030345314 NRMSE: 0.19959589049150062 MAPE: 228.93871900068788 Predictor: RandomForests Pearson Correlation: 0.5147210501453009 Spearman Correlation: 0.5335315400266676 Coefficient of Determination: 0.24995343811702808 RMSE: 0.4061007596974911 NRMSE: 0.10959493929177434 MAPE: 252.9138531022476 Pearson Correlation: 0.5426444411451047 Spearman Correlation: 0.5956059302485069 Coefficient of Determination: 0.2491498312802708 RMSE: 0.36131074577094974 NRMSE: 0.1748131184663301 MAPE: 231.47616816691362
TMM
scenario = Scenario.Top100InteractionPartners_Mutations
normalizeTechnique = NormalizeTechnique.TMM
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12.2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 6.676054 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SH-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SJ-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SK-01 | 6.676054 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SQ-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AATF', 'ABL1', 'AKT1', 'AR', 'ASF1A', 'ATF2', 'BGLAP', 'CASP3', 'CBX4', 'CCNA1', 'CCNA2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CEBPA', 'COL1A1', 'CREBBP', 'CTBP1', 'DNMT1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'ELF1', 'EP300', 'FOXM1', 'FZR1', 'GNB2L1', 'H1F0', 'H2AFV', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HIST1H2BA', 'HIST2H2AC', 'HIST2H2BE', 'HMGA1', 'HMGA2', 'HSP90AA1', 'ID2', 'JUN', 'MAPK14', 'MAPK1', 'MAPK3', 'MDM2', 'MEF2C', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NFYC', 'PCNA', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP2CA', 'PPP2CB', 'PRIM1', 'PRIM2', 'RAF1', 'RBBP4', 'RUNX2', 'SIRT1', 'SKP2', 'SMARCA2', 'SMC2', 'SMC4', 'SP100', 'SP1', 'SP3', 'SPI1', 'SUV39H1', 'TAF1', 'TBP', 'TERT', 'TFDP1', 'TP53BP1', 'TP53', 'TP73', 'YAP1', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.2136564833448852 Spearman Correlation: 0.1687347017479647 Coefficient of Determination: 0.045649092875303054 RMSE: 0.21892716213626384 NRMSE: 0.08291125246592078 MAPE: 229.29997807354772 Pearson Correlation: 0.0949671476255725 Spearman Correlation: 0.15520453700010084 Coefficient of Determination: -0.0305495910653939 RMSE: 0.28471808699075923 NRMSE: 0.1406550080725803 MAPE: 121.87621218277197 Predictor: ElasticNet Pearson Correlation: 0.10896321213473185 Spearman Correlation: 0.10428550557203828 Coefficient of Determination: 0.006575087726547579 RMSE: 0.22336397283094528 NRMSE: 0.0845915443404451 MAPE: 227.71283280712794 Pearson Correlation: 0.08703605568143365 Spearman Correlation: 0.16806272775186729 Coefficient of Determination: -0.030765046893510117 RMSE: 0.28474784827822675 NRMSE: 0.14066971059525188 MAPE: 134.67032793647874 Predictor: RandomForests Pearson Correlation: 0.2324669135867754 Spearman Correlation: 0.16290860022737302 Coefficient of Determination: 0.03824594214192878 RMSE: 0.21977465950529254 NRMSE: 0.08323221340855615 MAPE: 218.26178208628093 Pearson Correlation: -0.062245835100359505 Spearman Correlation: 0.19933503986057835 Coefficient of Determination: -0.06204244819597049 RMSE: 0.2890357394994546 NRMSE: 0.14278799321196434 MAPE: 124.15242822869048 Protein: CDH1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ACTA1', 'ACTN1', 'ADAM10', 'ADAM15', 'CA2', 'CASP3', 'CBLL1', 'CDC42', 'CDH17', 'CDH3', 'CDH5', 'CTBP1', 'CTNNA1', 'CTNNB1', 'CTNND1', 'CTTN', 'DLG1', 'EFNA1', 'EGFR', 'EGF', 'ENAH', 'EPCAM', 'EPHA2', 'EXOC3', 'EXOC4', 'FER', 'FLOT1', 'FLOT2', 'FMN1', 'FYN', 'GDNF', 'GNA12', 'GNA13', 'HGF', 'HGS', 'IGF1R', 'IGF1', 'IGF2', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'ITGA6', 'ITGAE', 'ITGB4', 'ITGB7', 'AJUBA', 'JUP', 'KIFC3', 'KLK7', 'KLRG1', 'LAMB1', 'LAMC2', 'LIMA1', 'MAPK1', 'MAPK3', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MLLT4', 'MMP3', 'MMP7', 'MMP9', 'MYO6', 'NCSTN', 'NUMB', 'PARD6A', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PLEKHA7', 'PLG', 'PRKCI', 'PRKCZ', 'PSEN1', 'PVRL1', 'PVRL2', 'RAB5A', 'RAB7A', 'RAC1', 'RAP1A', 'RET', 'RHOA', 'SKIL', 'SMAD3', 'SMAD4', 'SNAI1', 'SNAI2', 'SNAI3', 'SRC', 'STX4', 'TJP1', 'TWIST1', 'VASP', 'VCL', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 0.5732651230773022 Spearman Correlation: 0.4262423909277291 Coefficient of Determination: 0.3286329013368344 RMSE: 0.9246028516429056 NRMSE: 0.15541372121811062 MAPE: 229.53023825024582 Pearson Correlation: 0.6275137451636251 Spearman Correlation: 0.5640054520139276 Coefficient of Determination: 0.3895368013368734 RMSE: 0.9065714222694061 NRMSE: 0.1468322085888708 MAPE: 188.14197241784132 Predictor: ElasticNet Pearson Correlation: 0.5527274281809014 Spearman Correlation: 0.42276613227913645 Coefficient of Determination: 0.24790908917467824 RMSE: 0.9786116274026099 NRMSE: 0.16449189440818412 MAPE: 285.2273044420833 Pearson Correlation: 0.6270255727881701 Spearman Correlation: 0.5357785685144402 Coefficient of Determination: 0.29829215598829883 RMSE: 0.9719645970255204 NRMSE: 0.15742356856362288 MAPE: 239.8206040405265 Predictor: RandomForests Pearson Correlation: 0.5630582375469968 Spearman Correlation: 0.42896097272013917 Coefficient of Determination: 0.3166542246889904 RMSE: 0.9328148652612173 NRMSE: 0.1567940539662174 MAPE: 226.0233998443696 Pearson Correlation: 0.6127705812489764 Spearman Correlation: 0.5631597766921502 Coefficient of Determination: 0.37065586763421543 RMSE: 0.920484276711261 NRMSE: 0.14908559436222685 MAPE: 177.5435338793674 Protein: CDH2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ADAM10', 'AFP', 'AHSG', 'ALB', 'APLP2', 'APOA1', 'APOB', 'APOE', 'APP', 'AXIN1', 'BDNF', 'BMP4', 'BNIP2', 'CALU', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH17', 'CDH18', 'CDH1', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDON', 'CREBBP', 'CSF1', 'CST3', 'CTNNA1', 'CTNNA2', 'CTNNB1', 'CTNND1', 'CYR61', 'FAM20C', 'FBN1', 'FER', 'FGFR1', 'FN1', 'FSTL1', 'GAS6', 'GJA1', 'GOLM1', 'GPC3', 'GRIA2', 'HSP90B1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL6', 'ITIH2', 'JUP', 'KIF5B', 'KNG1', 'KTN1', 'LAMB1', 'LAMC1', 'LGALS1', 'LRP5', 'LTBP1', 'MAP2K6', 'MAPK11', 'MAPK14', 'MATN3', 'MEF2A', 'MEF2C', 'MEF2D', 'MET', 'MFGE8', 'MSLN', 'NTRK2', 'P4HB', 'PCSK9', 'PIK3CA', 'PIK3R1', 'PTPN11', 'PTPN1', 'RAC1', 'RHOA', 'ROBO1', 'SCG2', 'SDC2', 'SERPINA1', 'SLIT1', 'SNAI1', 'SNAI2', 'SPAG9', 'SPARCL1', 'SPP1', 'STC2', 'TCF3', 'TIMP1', 'TMEM132A', 'TNC', 'VCAN', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.3304796341880999 Spearman Correlation: 0.317534330481697 Coefficient of Determination: 0.10921678861310036 RMSE: 0.350338205054825 NRMSE: 0.12942557457684523 MAPE: 1379.9886627075193 Pearson Correlation: 0.0825311934825686 Spearman Correlation: 0.09516736966030982 Coefficient of Determination: -0.055895149177347836 RMSE: 0.385456006098019 NRMSE: 0.19892450126336328 MAPE: 153.86504676547074 Predictor: ElasticNet Pearson Correlation: 0.25943996548885445 Spearman Correlation: 0.28291577030721726 Coefficient of Determination: 0.05597776465146831 RMSE: 0.36065553421174207 NRMSE: 0.1332371093594233 MAPE: 563.626694075224 Pearson Correlation: 0.19161090916150497 Spearman Correlation: 0.1606885354990967 Coefficient of Determination: 0.03500782066389996 RMSE: 0.3684905176218705 NRMSE: 0.19016902390559454 MAPE: 122.46257642814513 Predictor: RandomForests Pearson Correlation: 0.3183147206120187 Spearman Correlation: 0.3195811537425463 Coefficient of Determination: 0.08840949208335658 RMSE: 0.3544062614016285 NRMSE: 0.13092843815980396 MAPE: 893.4772194879654 Pearson Correlation: 0.2769632792934106 Spearman Correlation: 0.22900639060109773 Coefficient of Determination: 0.06996476565813325 RMSE: 0.3617546488180048 NRMSE: 0.1866928052939076 MAPE: 132.41323744890013 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.3634134091854665 Spearman Correlation: 0.34540202187490804 Coefficient of Determination: 0.13206930597580324 RMSE: 0.1945237105266872 NRMSE: 0.1364733895483858 MAPE: 462.0611521290291 Pearson Correlation: 0.3464992978966692 Spearman Correlation: 0.3814140552658201 Coefficient of Determination: 0.10156265161099176 RMSE: 0.19391242664589556 NRMSE: 0.14842016260564064 MAPE: 259.1301632877285 Predictor: ElasticNet Pearson Correlation: 0.2781616656582001 Spearman Correlation: 0.27514400799473704 Coefficient of Determination: 0.048078994950823906 RMSE: 0.2037185031573505 NRMSE: 0.1429242459149622 MAPE: 159.83259207046328 Pearson Correlation: 0.30995638542042636 Spearman Correlation: 0.3125018428696387 Coefficient of Determination: 0.059123337832618694 RMSE: 0.19843948471565462 NRMSE: 0.1518851633096223 MAPE: 164.77057939081445 Predictor: RandomForests Pearson Correlation: 0.32509813127473014 Spearman Correlation: 0.32484248783073005 Coefficient of Determination: 0.09454479850987119 RMSE: 0.19868427934120866 NRMSE: 0.13939234954061336 MAPE: 226.97021867144983 Pearson Correlation: 0.36521737800947096 Spearman Correlation: 0.3515918465632082 Coefficient of Determination: 0.11242472294899775 RMSE: 0.1927366654007862 NRMSE: 0.14752023742702788 MAPE: 214.45523394455424 Protein: PTEN Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AR', 'BCR', 'CD79A', 'CD79B', 'CDIPT', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'DLG1', 'EGFR', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'FOXO3', 'FOXO4', 'FRK', 'GRB2', 'HRAS', 'INPP4A', 'INPP4B', 'INPP5B', 'INPP5D', 'INPP5J', 'INPP5K', 'INPPL1', 'IPMK', 'IRS1', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'MAST2', 'MDM2', 'MDM4', 'MKRN1', 'MTOR', 'MYC', 'NEDD4', 'NOTCH1', 'OCRL', 'OTUD3', 'PARK7', 'PDGFB', 'PDGFRB', 'PI4K2A', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIKFYVE', 'PIP4K2A', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PML', 'PREX2', 'PSMA6', 'PSMA7', 'PSMB9', 'PSMC6', 'PSMD10', 'PSMD5', 'PSME3', 'PTK2', 'RICTOR', 'RNF146', 'ROCK1', 'ROCK2', 'RPS27A', 'RPS6KB1', 'SACM1L', 'SHC1', 'SLC9A3R1', 'SLC9A3R2', 'SOS1', 'STK11', 'STUB1', 'SYNJ1', 'SYNJ2', 'TNKS2', 'TNKS', 'TNRC6A', 'TNRC6B', 'TP53', 'UBB', 'UBC', 'USP13', 'USP7', 'WWP2', 'XIAP', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 0.3323927379384516 Spearman Correlation: 0.3108206206207081 Coefficient of Determination: 0.11048493223422018 RMSE: 0.5908534717213428 NRMSE: 0.09238581373173994 MAPE: 574.5974587082109 Pearson Correlation: 0.05526113289535049 Spearman Correlation: 0.12719892872831057 Coefficient of Determination: -0.22218844868608612 RMSE: 0.5490777120394087 NRMSE: 0.1809629266493338 MAPE: 228.37911414188366 Predictor: ElasticNet Pearson Correlation: 0.26841866542011006 Spearman Correlation: 0.2675775693321667 Coefficient of Determination: 0.05435323594366315 RMSE: 0.609210819171438 NRMSE: 0.0952561674883024 MAPE: 450.46844369304927 Pearson Correlation: 0.0414458277187788 Spearman Correlation: 0.07016243820091267 Coefficient of Determination: -0.0326549467854329 RMSE: 0.5047105034696197 NRMSE: 0.1663405521948519 MAPE: 177.22283062828024 Predictor: RandomForests Pearson Correlation: 0.3169758756123265 Spearman Correlation: 0.29492573177474646 Coefficient of Determination: 0.09506687402864034 RMSE: 0.5959521353990834 NRMSE: 0.0931830404814453 MAPE: 476.61719414289473 Pearson Correlation: 0.022159778132320212 Spearman Correlation: 0.07242944039029627 Coefficient of Determination: -0.06679140642771397 RMSE: 0.5129847826578773 NRMSE: 0.1690675573982853 MAPE: 191.33849335028484 Protein: BRCA2 Protein Interaction Partners Count: 100 x_train_column_count: 99 x_train columns: ['ATM', 'ATRIP', 'ATR', 'BARD1', 'BLM', 'BRCA1', 'BRIP1', 'SLX4', 'RHNO1', 'RMI2', 'CDK2', 'CDK4', 'CHEK1', 'CHEK2', 'DMC1', 'DNA2', 'EME1', 'EME2', 'EXO1', 'FANCD2', 'FANCE', 'FANCG', 'FANCI', 'GEN1', 'H2AFX', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HUS1', 'KAT5', 'SPIDR', 'MLH1', 'MLH3', 'MND1', 'MRE11A', 'MSH4', 'MSH5', 'MUS81', 'NBN', 'PALB2', 'PARP1', 'PCNA', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'PSMC3IP', 'RAD17', 'RAD1', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD9A', 'RAD9B', 'RBBP8', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SPO11', 'SYCP3', 'TEX15', 'TOP3A', 'TOPBP1', 'TP53', 'UBA52', 'UBB', 'UBC', 'WRN', 'XRCC2', 'XRCC3', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.24266389807734007 Spearman Correlation: 0.21079739772618264 Coefficient of Determination: 0.058885767430089664 RMSE: 0.1917047108464148 NRMSE: 0.12401168983375907 MAPE: 165.5687083143811 Pearson Correlation: 0.01108207885205906 Spearman Correlation: 0.016102030396310644 Coefficient of Determination: -0.05874900758404311 RMSE: 0.19008371439262975 NRMSE: 0.19023590311512187 MAPE: 218.43560783563757 Predictor: ElasticNet Pearson Correlation: 0.12204841282689782 Spearman Correlation: 0.133275472787145 Coefficient of Determination: 0.006257303218491828 RMSE: 0.19699199997670722 NRMSE: 0.1274319795949874 MAPE: 125.29226804745824 Pearson Correlation: 0.011394815145782205 Spearman Correlation: 0.008784106059644062 Coefficient of Determination: -0.004522160102422346 RMSE: 0.185151895564558 NRMSE: 0.1853001356730965 MAPE: 109.6967327087681 Predictor: RandomForests Pearson Correlation: 0.24709853636323054 Spearman Correlation: 0.22195077919024528 Coefficient of Determination: 0.04015678196862482 RMSE: 0.19360285827481183 NRMSE: 0.12523958073487368 MAPE: 135.28274839462716 Pearson Correlation: -0.02576663849498675 Spearman Correlation: -0.02136321199902516 Coefficient of Determination: -0.022747208590266244 RMSE: 0.18682395131844748 NRMSE: 0.18697353014256154 MAPE: 130.6087065331212 Protein: CDKN2A Protein Interaction Partners Count: 100 x_train_column_count: 100 x_train columns: ['ABL1', 'AKT1', 'ARF1', 'BMI1', 'BRCA1', 'CBX7', 'CCND1', 'CCND2', 'CCND3', 'CCNL1', 'CDC45', 'CDC6', 'CDC7', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPB', 'CTCF', 'DAXX', 'E2F1', 'E2F2', 'E2F3', 'EGFR', 'EGR1', 'AGO1', 'AGO3', 'AGO4', 'ERBB2', 'EZH2', 'FOXM1', 'GMNN', 'HDAC1', 'HIF1A', 'HRAS', 'HUWE1', 'IL6', 'KRAS', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAX', 'MCM10', 'MCM2', 'MCM5', 'MDM2', 'MDM4', 'MGMT', 'MLH1', 'MOV10', 'MRAS', 'MTAP', 'MYCN', 'MYC', 'NPM1', 'NRAS', 'ORC5', 'PIK3CA', 'PIK3R1', 'PTEN', 'RASSF1', 'RB1', 'RPS27A', 'RRAS2', 'RRAS', 'RUNX3', 'SMAD3', 'SMAD4', 'SMARCA4', 'SUMO1', 'SUMO2', 'SUMO3', 'TBX2', 'TERT', 'TFDP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TP53', 'TP63', 'TRIP12', 'TWIST1', 'UBA52', 'UBB', 'UBC', 'UBE2I', 'USP7', 'VEGFA', 'WRN', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 0.2661265942014425 Spearman Correlation: 0.1677586742086253 Coefficient of Determination: 0.07082336414125923 RMSE: 0.6195372143128854 NRMSE: 0.14005588658593543 MAPE: 195.38276337611458 Pearson Correlation: 0.14361975884333508 Spearman Correlation: 0.11278724278612412 Coefficient of Determination: 0.013312285998895779 RMSE: 0.7418770080414551 NRMSE: 0.20034485769415478 MAPE: 584.6593743065127 Predictor: ElasticNet Pearson Correlation: 0.1274569554001537 Spearman Correlation: 0.1386034378006219 Coefficient of Determination: 0.013136804306938532 RMSE: 0.6384791718523767 NRMSE: 0.14433800652252213 MAPE: 197.7384693098593 Pearson Correlation: 0.08476310002339359 Spearman Correlation: 0.08767751093964805 Coefficient of Determination: -0.0028693350121056227 RMSE: 0.7479356386123024 NRMSE: 0.2019809988150965 MAPE: 435.86140262175013 Predictor: RandomForests Pearson Correlation: 0.25622624454696574 Spearman Correlation: 0.16943849012311868 Coefficient of Determination: 0.049674200022985504 RMSE: 0.6265482454416932 NRMSE: 0.14164083767190982 MAPE: 194.83392115812 Pearson Correlation: 0.06952360214828332 Spearman Correlation: 0.07377312857849012 Coefficient of Determination: -0.0038403505212780686 RMSE: 0.7482976406036661 NRMSE: 0.20207875792699598 MAPE: 449.10385983285136 Protein: TP53 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AKT1', 'APAF1', 'ATM', 'ATR', 'AURKA', 'AURKB', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2L1', 'BCL2', 'BCL6', 'BRCA1', 'CASP8', 'CCNA2', 'CCNE1', 'CCNG1', 'CDC25C', 'CDK2', 'CDK5', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CHEK1', 'CHEK2', 'COPS5', 'CREBBP', 'DDB2', 'DDX5', 'DYRK2', 'E2F4', 'EGR1', 'EHMT2', 'EP300', 'EZH2', 'FZR1', 'GADD45A', 'GLS2', 'GSK3B', 'HDAC1', 'HDAC2', 'HIF1A', 'HIPK2', 'HSP90AA1', 'HSPA1A', 'IGFBP3', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'MAPK14', 'MAPK1', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MCL1', 'MDM2', 'MDM4', 'MSH2', 'NGFR', 'NPM1', 'PLK3', 'PMAIP1', 'PPP1R13B', 'PPP1R13L', 'PRKDC', 'PRMT5', 'PTEN', 'RB1', 'RCHY1', 'DROSHA', 'RPA1', 'RRM2B', 'SETD7', 'SETD8', 'SFN', 'SIRT1', 'SMYD2', 'SNAI1', 'SNAI2', 'SP1', 'STAT3', 'STK11', 'SUMO1', 'SUMO2', 'TBP', 'TNFRSF10A', 'TNFRSF10B', 'TP53BP1', 'TP53BP2', 'TP53INP1', 'TP53RK', 'TXN', 'UBE2I', 'USP7', 'WRN', 'XRCC6', 'YY1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.3680522626626212 Spearman Correlation: 0.3667666871039015 Coefficient of Determination: 0.13546246805107498 RMSE: 0.4210339477076224 NRMSE: 0.101185760083543 MAPE: 650.2800286036785 Pearson Correlation: 0.4455830658925391 Spearman Correlation: 0.44509056682793485 Coefficient of Determination: 0.19652601838992 RMSE: 0.3770456953016152 NRMSE: 0.13558405383207423 MAPE: 803.6446079566247 Predictor: ElasticNet Pearson Correlation: 0.34556665371923295 Spearman Correlation: 0.3717505485630637 Coefficient of Determination: 0.10296463664595079 RMSE: 0.42887424877767477 NRMSE: 0.10306999489970556 MAPE: 524.8077097833724 Pearson Correlation: 0.46370614009416816 Spearman Correlation: 0.4812509937664257 Coefficient of Determination: 0.16465833973266208 RMSE: 0.38445025074671973 NRMSE: 0.13824670097692104 MAPE: 655.3348529963067 Predictor: RandomForests Pearson Correlation: 0.36637198075226973 Spearman Correlation: 0.38250193490731343 Coefficient of Determination: 0.13396012320595485 RMSE: 0.4213996135108716 NRMSE: 0.10127363939218256 MAPE: 671.2999985747913 Pearson Correlation: 0.46727769348701936 Spearman Correlation: 0.46927417597881077 Coefficient of Determination: 0.20926434075205613 RMSE: 0.37404490211029734 NRMSE: 0.13450498116088222 MAPE: 813.7369274804653 Protein: CTNNB1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'AKT1', 'APC2', 'APC', 'AR', 'AXIN1', 'AXIN2', 'BCL9', 'BTRC', 'CASP3', 'CBY1', 'CCND1', 'CDC73', 'CDH11', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDH5', 'CDH8', 'CHD8', 'CREBBP', 'CSNK1A1', 'CSNK1E', 'CTBP1', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNBIP1', 'CTNND1', 'DVL1', 'DVL2', 'DVL3', 'EGFR', 'EGF', 'EP300', 'ERBB2', 'AMER1', 'FBXW11', 'FER', 'FGFR1', 'FOXO1', 'FOXO3', 'FYN', 'FZD1', 'FZD2', 'FZD5', 'GSK3A', 'GSK3B', 'HNF4A', 'IGF1R', 'IQGAP1', 'JUN', 'JUP', 'KDR', 'KLF4', 'LEF1', 'LRP5', 'LRP6', 'MAPK9', 'MEN1', 'MET', 'MMP7', 'MYC', 'NLK', 'NOTCH1', 'PIK3CA', 'PIK3R1', 'PITX2', 'PSEN1', 'PTPN11', 'PTPN1', 'PYGO2', 'RUVBL1', 'SKP1', 'SMAD4', 'SMAD7', 'SMARCA4', 'SOX17', 'SOX2', 'SOX6', 'SOX9', 'SRC', 'TBL1X', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TGFBR1', 'TGFBR2', 'TJP1', 'TLE1', 'VCL', 'VEGFA', 'WNT1', 'WNT3A', 'WNT8A', 'WNT8B', 'YWHAZ', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 0.3320399468699041 Spearman Correlation: 0.2882888784146445 Coefficient of Determination: 0.11025052631736842 RMSE: 0.6954083686842384 NRMSE: 0.14015526305182466 MAPE: 614.529384701689 Pearson Correlation: 0.02854783702802319 Spearman Correlation: 0.042477373795141826 Coefficient of Determination: -0.1009099533373381 RMSE: 0.7879368512281979 NRMSE: 0.19548872406792983 MAPE: 395.64282187125576 Predictor: ElasticNet Pearson Correlation: 0.23233233548163817 Spearman Correlation: 0.20818044467015986 Coefficient of Determination: 0.036091054138815526 RMSE: 0.7238091156770992 NRMSE: 0.14587925825364276 MAPE: 542.8458544856331 Pearson Correlation: 0.11114515335358958 Spearman Correlation: 0.08883469570777656 Coefficient of Determination: 0.00012509346283040568 RMSE: 0.7509107956087699 NRMSE: 0.18630248489276285 MAPE: 340.28713334556926 Predictor: RandomForests Pearson Correlation: 0.32723170334663493 Spearman Correlation: 0.2516349541122369 Coefficient of Determination: 0.050983184015018335 RMSE: 0.7181960245573742 NRMSE: 0.14474797439534318 MAPE: 618.1496815878772 Pearson Correlation: 0.043963965220038585 Spearman Correlation: 0.11555810548739374 Coefficient of Determination: -0.015347673164913589 RMSE: 0.7566985511694787 NRMSE: 0.187738438736039 MAPE: 336.57419536782186 Protein: CCNE1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['ABL1', 'BARD1', 'BRCA1', 'CABLES1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNH', 'CCT2', 'CCT3', 'CCT4', 'CCT6A', 'CCT7', 'CDC25A', 'CDC6', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDT1', 'CKS1B', 'CKS2', 'CUL1', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'EP400', 'FOXM1', 'HDAC1', 'IFNAR1', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'MNAT1', 'MYC', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PCNA', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB7', 'PSMC1', 'PSMC2', 'PSMC4', 'PSMC5', 'PSMD10', 'PSMD11', 'PSMD14', 'PSMD1', 'PSMD3', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSME3', 'PTK6', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RHOA', 'RPS27A', 'RRN3', 'SKP1', 'SKP2', 'STAT5A', 'STAT5B', 'TCP1', 'TFDP1', 'TP53', 'TP73', 'UBB', 'UBC', 'WEE1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.31601261486750937 Spearman Correlation: 0.19433253181039034 Coefficient of Determination: 0.09986397275540082 RMSE: 0.4588854259127767 NRMSE: 0.1107429171785546 MAPE: 117.29306789938232 Pearson Correlation: 0.38429735194506526 Spearman Correlation: 0.2790816689059825 Coefficient of Determination: 0.13411289105459057 RMSE: 0.4997321458341244 NRMSE: 0.1779989833781387 MAPE: 76.26717823865727 Predictor: ElasticNet Pearson Correlation: 0.19668399247501409 Spearman Correlation: 0.15169818993387424 Coefficient of Determination: 0.033931332834582606 RMSE: 0.4753945416968397 NRMSE: 0.11472706559278899 MAPE: 116.87809657891151 Pearson Correlation: 0.2989094613854872 Spearman Correlation: 0.25918955192336796 Coefficient of Determination: 0.05129524264628449 RMSE: 0.5230849068084126 NRMSE: 0.1863169748204497 MAPE: 80.35455149916854 Predictor: RandomForests Pearson Correlation: 0.3175546393046467 Spearman Correlation: 0.18007969982561384 Coefficient of Determination: 0.08965886363952336 RMSE: 0.46147935468670437 NRMSE: 0.11136891055981475 MAPE: 113.83443884577409 Pearson Correlation: 0.3582670955883996 Spearman Correlation: 0.28670996386884573 Coefficient of Determination: 0.11161529319385843 RMSE: 0.5061825702027346 NRMSE: 0.18029655216482088 MAPE: 77.64777873661522 Protein: CCND1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ACTL6A', 'AKT1', 'ARID1A', 'ARID2', 'AR', 'ATF2', 'BRD2', 'BTG2', 'CCNA1', 'CCNB1', 'CCNE1', 'CCNH', 'CDC25A', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CKS1B', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUL1', 'DNMT3A', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'AGO2', 'EP300', 'ESR1', 'FOS', 'FOXA1', 'FOXM1', 'GADD45A', 'GATA3', 'GLI1', 'GLI3', 'GSK3B', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC4', 'HIST1H2BA', 'HIST2H2BE', 'HNF1A', 'IFNAR1', 'JAK2', 'JUN', 'KAT2B', 'LEF1', 'LYN', 'MAML1', 'MYB', 'MYC', 'NOTCH1', 'PBRM1', 'PCNA', 'PRMT5', 'PSMA6', 'PSMC6', 'PSMD10', 'PSMD6', 'PSMD7', 'PSME3', 'PTK6', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RELA', 'RUNX1', 'RUNX3', 'SKP1', 'SKP2', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'SUV39H1', 'TCF7L2', 'TFDP1', 'TP53', 'WDR77', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 0.21105822366378846 Spearman Correlation: 0.10579103998029941 Coefficient of Determination: 0.044544488515196545 RMSE: 0.23351269121602594 NRMSE: 0.14038107706774353 MAPE: 396.519598852412 Pearson Correlation: 0.10406092201945276 Spearman Correlation: 0.1806868073848344 Coefficient of Determination: -9.381991756448989e+20 RMSE: 7196445137.589242 NRMSE: 5125381130.412257 MAPE: 540888466597.42267 Predictor: ElasticNet Pearson Correlation: 0.06373401136865542 Spearman Correlation: 0.0568434893329777 Coefficient of Determination: 0.0009022118147826719 RMSE: 0.23878621569426117 NRMSE: 0.14355136748040856 MAPE: 407.18676051612715 Pearson Correlation: 0.047177463155953135 Spearman Correlation: 0.11251901853584333 Coefficient of Determination: 1.5388482431433204e-05 RMSE: 0.23494551219720256 NRMSE: 0.16733057389693076 MAPE: 1324.9845295943862 Predictor: RandomForests Pearson Correlation: 0.21652676519245756 Spearman Correlation: 0.10703207672289483 Coefficient of Determination: 0.028340802802739096 RMSE: 0.23548445153480552 NRMSE: 0.14156644235058224 MAPE: 401.39422935379383 Pearson Correlation: 0.09930925055351404 Spearman Correlation: 0.21909533398580056 Coefficient of Determination: 0.007321920360914502 RMSE: 0.23408560691621655 NRMSE: 0.16671814064456195 MAPE: 1288.1834525569896 Protein: ERBB2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ADAM17', 'ADRB2', 'AREG', 'ARHGEF11', 'ARHGEF12', 'BTC', 'CBL', 'CCND1', 'CD44', 'CDC37', 'CDH1', 'CTNNB1', 'CTNND1', 'CUL5', 'DIAPH1', 'DOCK7', 'EGFR', 'EGF', 'ERBB2IP', 'ERBB3', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FYN', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IL6R', 'IL6', 'INS', 'JAK1', 'JAK2', 'KRAS', 'LRPPRC', 'MAP2K1', 'MAPK8', 'MATK', 'MEMO1', 'MUC1', 'MUC4', 'MYC', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'PGAP3', 'PGR', 'PIK3CA', 'PIK3CB', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PLXNB1', 'PRKACA', 'PTEN', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'RHOA', 'RHOB', 'RHOC', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'RPS27A', 'SEMA4D', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SRC', 'STAT1', 'STAT3', 'STUB1', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TGFA', 'TP53', 'UBA52', 'UBB', 'UBC', 'VEGFA', 'YES1', 'YY1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 0.38873705985618945 Spearman Correlation: 0.39719489099996186 Coefficient of Determination: 0.1511165017056343 RMSE: 0.9389806654468045 NRMSE: 0.15997081033899593 MAPE: 510.4290712336155 Pearson Correlation: 0.15935770310048208 Spearman Correlation: 0.1911036807974302 Coefficient of Determination: -0.07119165527221738 RMSE: 0.9387722912574713 NRMSE: 0.1740723699717173 MAPE: 802.0509152422667 Predictor: ElasticNet Pearson Correlation: 0.36104878687082687 Spearman Correlation: 0.3967748936675578 Coefficient of Determination: 0.12434112493714777 RMSE: 0.9536743039037289 NRMSE: 0.16247411348173313 MAPE: 698.0259859922003 Pearson Correlation: 0.2430473925102212 Spearman Correlation: 0.2842510036375084 Coefficient of Determination: 0.04270342704723673 RMSE: 0.8874623228831567 NRMSE: 0.1645581907812269 MAPE: 562.0184608230215 Predictor: RandomForests Pearson Correlation: 0.3650473177563128 Spearman Correlation: 0.39841680882648844 Coefficient of Determination: 0.1285658230847787 RMSE: 0.9513709769500429 NRMSE: 0.16208170382643797 MAPE: 701.9256456695472 Pearson Correlation: 0.23529251841443916 Spearman Correlation: 0.3633720552816349 Coefficient of Determination: 0.03707715470194983 RMSE: 0.8900664217137484 NRMSE: 0.1650410572434171 MAPE: 486.10568750696797 Protein: ERBB3 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AKT2', 'ANGPT1', 'ANGPT2', 'AREG', 'AR', 'BDNF', 'BMP4', 'BTC', 'CBLB', 'CBL', 'CCND1', 'CDH1', 'CSF1', 'CSK', 'CTNNB1', 'DCN', 'DOCK7', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FGF10', 'FGF19', 'FGF1', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FIGF', 'FLNA', 'FOXO3', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IGF1', 'IGF2', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'JAK1', 'JAK2', 'KITLG', 'KRAS', 'LAMA1', 'LAMB1', 'LAMC2', 'MAP2K1', 'MAPK8', 'MET', 'MUC4', 'NGF', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NTF3', 'PA2G4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PRKACA', 'PTEN', 'PTPN11', 'RNF41', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SOX10', 'SRC', 'TGFA', 'VEGFA', 'VEGFB', 'VEGFC', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.3940621522269997 Spearman Correlation: 0.36235804903373686 Coefficient of Determination: 0.1552849798177749 RMSE: 0.42198641182399693 NRMSE: 0.11388202085673259 MAPE: 216.49445448575872 Pearson Correlation: 0.2705989663653101 Spearman Correlation: 0.3117044964015618 Coefficient of Determination: 0.04265761311193006 RMSE: 0.4554819059117776 NRMSE: 0.18276591627815936 MAPE: 236.04014482878753 Predictor: ElasticNet Pearson Correlation: 0.33675280930194823 Spearman Correlation: 0.33583839055372006 Coefficient of Determination: 0.10096423676231359 RMSE: 0.4353432774007087 NRMSE: 0.1174866555121776 MAPE: 205.57343641844136 Pearson Correlation: 0.28467736362023077 Spearman Correlation: 0.3141156123856433 Coefficient of Determination: 0.06407069770235685 RMSE: 0.4503591673264652 NRMSE: 0.1807103746655372 MAPE: 219.9799936624423 Predictor: RandomForests Pearson Correlation: 0.3483236173511204 Spearman Correlation: 0.3491592376897539 Coefficient of Determination: 0.1038420562170983 RMSE: 0.43464595055392474 NRMSE: 0.11729846701064231 MAPE: 207.0683559763577 Pearson Correlation: 0.18470199716755736 Spearman Correlation: 0.28941672149949904 Coefficient of Determination: 0.015419490549744674 RMSE: 0.46191610281167755 NRMSE: 0.1853476914851685 MAPE: 245.72919946413663 Fold: 2 Protein: RB1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AATF', 'ABL1', 'AKT1', 'AR', 'ASF1A', 'ATF2', 'BGLAP', 'CASP3', 'CBX4', 'CCNA1', 'CCNA2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CEBPA', 'COL1A1', 'CREBBP', 'CTBP1', 'DNMT1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'ELF1', 'EP300', 'FOXM1', 'FZR1', 'GNB2L1', 'H1F0', 'H2AFV', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HIST1H2BA', 'HIST2H2AC', 'HIST2H2BE', 'HMGA1', 'HMGA2', 'HSP90AA1', 'ID2', 'JUN', 'MAPK14', 'MAPK1', 'MAPK3', 'MDM2', 'MEF2C', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NFYC', 'PCNA', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP2CA', 'PPP2CB', 'PRIM1', 'PRIM2', 'RAF1', 'RBBP4', 'RUNX2', 'SIRT1', 'SKP2', 'SMARCA2', 'SMC2', 'SMC4', 'SP100', 'SP1', 'SP3', 'SPI1', 'SUV39H1', 'TAF1', 'TBP', 'TERT', 'TFDP1', 'TP53BP1', 'TP53', 'TP73', 'YAP1', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.20903000187030008 Spearman Correlation: 0.19497414315651124 Coefficient of Determination: 0.04369354168189765 RMSE: 0.22984889771796876 NRMSE: 0.08405825691850818 MAPE: 210.6376665055068 Pearson Correlation: 0.1418064091906085 Spearman Correlation: 0.11045974287597585 Coefficient of Determination: 0.001753517543258587 RMSE: 0.24468922116586578 NRMSE: 0.14018930753965567 MAPE: 169.76328663767202 Predictor: ElasticNet Pearson Correlation: 0.13334535360632746 Spearman Correlation: 0.14222141828682736 Coefficient of Determination: 0.00818108280883656 RMSE: 0.23407771788479745 NRMSE: 0.08560478272556958 MAPE: 182.99037537069646 Pearson Correlation: 0.14793797173379766 Spearman Correlation: 0.14348252260272365 Coefficient of Determination: -0.009812386424145947 RMSE: 0.24610265052874947 NRMSE: 0.14099910080596617 MAPE: 216.4658672776632 Predictor: RandomForests Pearson Correlation: 0.1872375351599473 Spearman Correlation: 0.18129163312218965 Coefficient of Determination: 0.027612243797165426 RMSE: 0.2317734161069708 NRMSE: 0.08476207435158382 MAPE: 164.81311928138228 Pearson Correlation: 0.1630113833938295 Spearman Correlation: 0.13078892041496507 Coefficient of Determination: 0.006021247360530335 RMSE: 0.24416561000582657 NRMSE: 0.13988931604188481 MAPE: 168.4602413203886 Protein: CDH1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ACTA1', 'ACTN1', 'ADAM10', 'ADAM15', 'CA2', 'CASP3', 'CBLL1', 'CDC42', 'CDH17', 'CDH3', 'CDH5', 'CTBP1', 'CTNNA1', 'CTNNB1', 'CTNND1', 'CTTN', 'DLG1', 'EFNA1', 'EGFR', 'EGF', 'ENAH', 'EPCAM', 'EPHA2', 'EXOC3', 'EXOC4', 'FER', 'FLOT1', 'FLOT2', 'FMN1', 'FYN', 'GDNF', 'GNA12', 'GNA13', 'HGF', 'HGS', 'IGF1R', 'IGF1', 'IGF2', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'ITGA6', 'ITGAE', 'ITGB4', 'ITGB7', 'AJUBA', 'JUP', 'KIFC3', 'KLK7', 'KLRG1', 'LAMB1', 'LAMC2', 'LIMA1', 'MAPK1', 'MAPK3', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MLLT4', 'MMP3', 'MMP7', 'MMP9', 'MYO6', 'NCSTN', 'NUMB', 'PARD6A', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PLEKHA7', 'PLG', 'PRKCI', 'PRKCZ', 'PSEN1', 'PVRL1', 'PVRL2', 'RAB5A', 'RAB7A', 'RAC1', 'RAP1A', 'RET', 'RHOA', 'SKIL', 'SMAD3', 'SMAD4', 'SNAI1', 'SNAI2', 'SNAI3', 'SRC', 'STX4', 'TJP1', 'TWIST1', 'VASP', 'VCL', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.5935411198295452 Spearman Correlation: 0.44806751983765253 Coefficient of Determination: 0.35229106092851015 RMSE: 0.9018608400842427 NRMSE: 0.14467968879188942 MAPE: 247.05858862966545 Pearson Correlation: 0.5113191502366802 Spearman Correlation: 0.3985881534019322 Coefficient of Determination: 0.20371059315322249 RMSE: 1.0267562587668826 NRMSE: 0.18233995005627465 MAPE: 210.69861449607257 Predictor: ElasticNet Pearson Correlation: 0.5672999109601844 Spearman Correlation: 0.4183409308369686 Coefficient of Determination: 0.2586080900648202 RMSE: 0.9648804470453368 NRMSE: 0.1547895158490955 MAPE: 228.69516663835466 Pearson Correlation: 0.5381131857822413 Spearman Correlation: 0.4719590872439299 Coefficient of Determination: 0.2053435185040675 RMSE: 1.0257029502975963 NRMSE: 0.18215289474295795 MAPE: 181.0877218775181 Predictor: RandomForests Pearson Correlation: 0.5838532829087206 Spearman Correlation: 0.4327733357795494 Coefficient of Determination: 0.34076259633476436 RMSE: 0.909851477082047 NRMSE: 0.14596157489083933 MAPE: 208.25133868642004 Pearson Correlation: 0.5316937530302418 Spearman Correlation: 0.4659022150613633 Coefficient of Determination: 0.22973550892559913 RMSE: 1.0098382775789523 NRMSE: 0.17933551368832396 MAPE: 227.13930764153417 Protein: CDH2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ADAM10', 'AFP', 'AHSG', 'ALB', 'APLP2', 'APOA1', 'APOB', 'APOE', 'APP', 'AXIN1', 'BDNF', 'BMP4', 'BNIP2', 'CALU', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH17', 'CDH18', 'CDH1', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDON', 'CREBBP', 'CSF1', 'CST3', 'CTNNA1', 'CTNNA2', 'CTNNB1', 'CTNND1', 'CYR61', 'FAM20C', 'FBN1', 'FER', 'FGFR1', 'FN1', 'FSTL1', 'GAS6', 'GJA1', 'GOLM1', 'GPC3', 'GRIA2', 'HSP90B1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL6', 'ITIH2', 'JUP', 'KIF5B', 'KNG1', 'KTN1', 'LAMB1', 'LAMC1', 'LGALS1', 'LRP5', 'LTBP1', 'MAP2K6', 'MAPK11', 'MAPK14', 'MATN3', 'MEF2A', 'MEF2C', 'MEF2D', 'MET', 'MFGE8', 'MSLN', 'NTRK2', 'P4HB', 'PCSK9', 'PIK3CA', 'PIK3R1', 'PTPN11', 'PTPN1', 'RAC1', 'RHOA', 'ROBO1', 'SCG2', 'SDC2', 'SERPINA1', 'SLIT1', 'SNAI1', 'SNAI2', 'SPAG9', 'SPARCL1', 'SPP1', 'STC2', 'TCF3', 'TIMP1', 'TMEM132A', 'TNC', 'VCAN', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.29834025598297265 Spearman Correlation: 0.296389404112933 Coefficient of Determination: 0.0889272336546092 RMSE: 0.35135029936232587 NRMSE: 0.12731005846884771 MAPE: 810.1996473467939 Pearson Correlation: 0.24016211765377332 Spearman Correlation: 0.2730528283411661 Coefficient of Determination: 0.04896574928849684 RMSE: 0.377484596582169 NRMSE: 0.19886764440601684 MAPE: 301.2752940361838 Predictor: ElasticNet Pearson Correlation: 0.22573253004209523 Spearman Correlation: 0.25172321051270086 Coefficient of Determination: 0.04122472468066407 RMSE: 0.36043105947186743 NRMSE: 0.1306004273758488 MAPE: 635.5521312957177 Pearson Correlation: 0.3466405218192405 Spearman Correlation: 0.36667873814102614 Coefficient of Determination: 0.06905787811691766 RMSE: 0.3734758258728269 NRMSE: 0.19675573097922047 MAPE: 184.3028497412308 Predictor: RandomForests Pearson Correlation: 0.31487103341251943 Spearman Correlation: 0.29733022014138916 Coefficient of Determination: 0.0865185110886908 RMSE: 0.3518144482162584 NRMSE: 0.12747824053056686 MAPE: 889.1145018631528 Pearson Correlation: 0.27380131815513725 Spearman Correlation: 0.33972631476076093 Coefficient of Determination: 0.06516049147629521 RMSE: 0.37425678711397303 NRMSE: 0.19716715948201322 MAPE: 212.661169463808 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.40187188866702045 Spearman Correlation: 0.3866505912605725 Coefficient of Determination: 0.16150101490079805 RMSE: 0.19019618007080322 NRMSE: 0.14314133049664204 MAPE: 369.58755002517563 Pearson Correlation: 0.22344863254766822 Spearman Correlation: 0.24502448049703468 Coefficient of Determination: -0.12054453667407006 RMSE: 0.2095176871535696 NRMSE: 0.17239997297257437 MAPE: 612.9646188853607 Predictor: ElasticNet Pearson Correlation: 0.3238825331251571 Spearman Correlation: 0.3321232880033837 Coefficient of Determination: 0.07574273736865245 RMSE: 0.19968569562597344 NRMSE: 0.1502831242058006 MAPE: 183.82615171606366 Pearson Correlation: 0.10534231497993729 Spearman Correlation: 0.18904392375588666 Coefficient of Determination: -0.13855400665094075 RMSE: 0.21119466731982592 NRMSE: 0.1737798628485361 MAPE: 382.52604089929514 Predictor: RandomForests Pearson Correlation: 0.3457378127819289 Spearman Correlation: 0.3386322421000003 Coefficient of Determination: 0.11697025963020946 RMSE: 0.19518129044630167 NRMSE: 0.14689311631881694 MAPE: 237.74834203687894 Pearson Correlation: 0.11036253238110202 Spearman Correlation: 0.2299232120127502 Coefficient of Determination: -0.17045763300288796 RMSE: 0.2141331862042303 NRMSE: 0.176197799888283 MAPE: 537.1691567278485 Protein: PTEN Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AR', 'BCR', 'CD79A', 'CD79B', 'CDIPT', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'DLG1', 'EGFR', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'FOXO3', 'FOXO4', 'FRK', 'GRB2', 'HRAS', 'INPP4A', 'INPP4B', 'INPP5B', 'INPP5D', 'INPP5J', 'INPP5K', 'INPPL1', 'IPMK', 'IRS1', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'MAST2', 'MDM2', 'MDM4', 'MKRN1', 'MTOR', 'MYC', 'NEDD4', 'NOTCH1', 'OCRL', 'OTUD3', 'PARK7', 'PDGFB', 'PDGFRB', 'PI4K2A', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIKFYVE', 'PIP4K2A', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PML', 'PREX2', 'PSMA6', 'PSMA7', 'PSMB9', 'PSMC6', 'PSMD10', 'PSMD5', 'PSME3', 'PTK2', 'RICTOR', 'RNF146', 'ROCK1', 'ROCK2', 'RPS27A', 'RPS6KB1', 'SACM1L', 'SHC1', 'SLC9A3R1', 'SLC9A3R2', 'SOS1', 'STK11', 'STUB1', 'SYNJ1', 'SYNJ2', 'TNKS2', 'TNKS', 'TNRC6A', 'TNRC6B', 'TP53', 'UBB', 'UBC', 'USP13', 'USP7', 'WWP2', 'XIAP', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.2877538707309597 Spearman Correlation: 0.2692542306553506 Coefficient of Determination: 0.0828022901206501 RMSE: 0.5973677542800475 NRMSE: 0.09340438656556133 MAPE: 366.42598167283904 Pearson Correlation: 0.18601929707997214 Spearman Correlation: 0.18853172718664032 Coefficient of Determination: -0.0007450717397337048 RMSE: 0.5118207305129759 NRMSE: 0.17165975667862088 MAPE: 761.1720436442625 Predictor: ElasticNet Pearson Correlation: 0.23625889464467079 Spearman Correlation: 0.22683818873973793 Coefficient of Determination: 0.04410571857240797 RMSE: 0.6098390450810779 NRMSE: 0.09535439685420653 MAPE: 309.38193893146047 Pearson Correlation: 0.0777342193879242 Spearman Correlation: 0.15923697140203721 Coefficient of Determination: -0.00012524987979745106 RMSE: 0.511662205218957 NRMSE: 0.17160658881773444 MAPE: 587.1287217006579 Predictor: RandomForests Pearson Correlation: 0.3118972925730897 Spearman Correlation: 0.25114790932457354 Coefficient of Determination: 0.0939067568193529 RMSE: 0.5937405916504657 NRMSE: 0.09283724363231423 MAPE: 341.5198782359039 Pearson Correlation: 0.04717495939618636 Spearman Correlation: 0.19455318691053494 Coefficient of Determination: -0.10579231066390515 RMSE: 0.5380131926327613 NRMSE: 0.1804444568797831 MAPE: 633.427320505736 Protein: BRCA2 Protein Interaction Partners Count: 100 x_train_column_count: 99 x_train columns: ['ATM', 'ATRIP', 'ATR', 'BARD1', 'BLM', 'BRCA1', 'BRIP1', 'SLX4', 'RHNO1', 'RMI2', 'CDK2', 'CDK4', 'CHEK1', 'CHEK2', 'DMC1', 'DNA2', 'EME1', 'EME2', 'EXO1', 'FANCD2', 'FANCE', 'FANCG', 'FANCI', 'GEN1', 'H2AFX', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HUS1', 'KAT5', 'SPIDR', 'MLH1', 'MLH3', 'MND1', 'MRE11A', 'MSH4', 'MSH5', 'MUS81', 'NBN', 'PALB2', 'PARP1', 'PCNA', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'PSMC3IP', 'RAD17', 'RAD1', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD9A', 'RAD9B', 'RBBP8', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SPO11', 'SYCP3', 'TEX15', 'TOP3A', 'TOPBP1', 'TP53', 'UBA52', 'UBB', 'UBC', 'WRN', 'XRCC2', 'XRCC3', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.20677360613538046 Spearman Correlation: 0.16458237912480653 Coefficient of Determination: 0.04275532419422956 RMSE: 0.19110320404461426 NRMSE: 0.12311367630511469 MAPE: 163.9416176339451 Pearson Correlation: 0.1291015750214937 Spearman Correlation: 0.16368119788167926 Coefficient of Determination: -0.0029618600361682734 RMSE: 0.19347364073938064 NRMSE: 0.13096169490863965 MAPE: 112.08217474562743 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: RandomForests Pearson Correlation: 0.23390242372733627 Spearman Correlation: 0.18964430119512177 Coefficient of Determination: 0.03047327210001627 RMSE: 0.192325283760964 NRMSE: 0.12390097198322693 MAPE: 135.85250140733496 Pearson Correlation: 0.13853082351682322 Spearman Correlation: 0.19001466496404854 Coefficient of Determination: -0.0021301044473704955 RMSE: 0.1933934003207201 NRMSE: 0.1309073804232772 MAPE: 120.19172273533249 Protein: CDKN2A Protein Interaction Partners Count: 100 x_train_column_count: 100 x_train columns: ['ABL1', 'AKT1', 'ARF1', 'BMI1', 'BRCA1', 'CBX7', 'CCND1', 'CCND2', 'CCND3', 'CCNL1', 'CDC45', 'CDC6', 'CDC7', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPB', 'CTCF', 'DAXX', 'E2F1', 'E2F2', 'E2F3', 'EGFR', 'EGR1', 'AGO1', 'AGO3', 'AGO4', 'ERBB2', 'EZH2', 'FOXM1', 'GMNN', 'HDAC1', 'HIF1A', 'HRAS', 'HUWE1', 'IL6', 'KRAS', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAX', 'MCM10', 'MCM2', 'MCM5', 'MDM2', 'MDM4', 'MGMT', 'MLH1', 'MOV10', 'MRAS', 'MTAP', 'MYCN', 'MYC', 'NPM1', 'NRAS', 'ORC5', 'PIK3CA', 'PIK3R1', 'PTEN', 'RASSF1', 'RB1', 'RPS27A', 'RRAS2', 'RRAS', 'RUNX3', 'SMAD3', 'SMAD4', 'SMARCA4', 'SUMO1', 'SUMO2', 'SUMO3', 'TBX2', 'TERT', 'TFDP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TP53', 'TP63', 'TRIP12', 'TWIST1', 'UBA52', 'UBB', 'UBC', 'UBE2I', 'USP7', 'VEGFA', 'WRN', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.21332212233242656 Spearman Correlation: 0.1479488362063298 Coefficient of Determination: 0.045506327876410624 RMSE: 0.6480760751601069 NRMSE: 0.14650753366341288 MAPE: 363.4989223466496 Pearson Correlation: 0.1310825687515721 Spearman Correlation: 0.0862827792143139 Coefficient of Determination: 0.013503447948819858 RMSE: 0.668870028711633 NRMSE: 0.18069754395710855 MAPE: 202.74916478107627 Predictor: ElasticNet Pearson Correlation: 0.11683021638133329 Spearman Correlation: 0.1265309611457997 Coefficient of Determination: 0.011012898004353233 RMSE: 0.6596822156496795 NRMSE: 0.1491312796766541 MAPE: 289.7968838054321 Pearson Correlation: 0.1373850685367227 Spearman Correlation: 0.1496856367364571 Coefficient of Determination: 0.007575211586207109 RMSE: 0.6708767667578163 NRMSE: 0.18123967115782805 MAPE: 214.5790843615777 Predictor: RandomForests Pearson Correlation: 0.22763384674652348 Spearman Correlation: 0.16368962710248294 Coefficient of Determination: 0.03839369900654821 RMSE: 0.6504862374011886 NRMSE: 0.1470523877927407 MAPE: 300.4970475826096 Pearson Correlation: 0.11504570490184331 Spearman Correlation: 0.1052906285976972 Coefficient of Determination: 0.008713467577400547 RMSE: 0.670491927224472 NRMSE: 0.18113570543129243 MAPE: 215.6599460516596 Protein: TP53 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AKT1', 'APAF1', 'ATM', 'ATR', 'AURKA', 'AURKB', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2L1', 'BCL2', 'BCL6', 'BRCA1', 'CASP8', 'CCNA2', 'CCNE1', 'CCNG1', 'CDC25C', 'CDK2', 'CDK5', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CHEK1', 'CHEK2', 'COPS5', 'CREBBP', 'DDB2', 'DDX5', 'DYRK2', 'E2F4', 'EGR1', 'EHMT2', 'EP300', 'EZH2', 'FZR1', 'GADD45A', 'GLS2', 'GSK3B', 'HDAC1', 'HDAC2', 'HIF1A', 'HIPK2', 'HSP90AA1', 'HSPA1A', 'IGFBP3', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'MAPK14', 'MAPK1', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MCL1', 'MDM2', 'MDM4', 'MSH2', 'NGFR', 'NPM1', 'PLK3', 'PMAIP1', 'PPP1R13B', 'PPP1R13L', 'PRKDC', 'PRMT5', 'PTEN', 'RB1', 'RCHY1', 'DROSHA', 'RPA1', 'RRM2B', 'SETD7', 'SETD8', 'SFN', 'SIRT1', 'SMYD2', 'SNAI1', 'SNAI2', 'SP1', 'STAT3', 'STK11', 'SUMO1', 'SUMO2', 'TBP', 'TNFRSF10A', 'TNFRSF10B', 'TP53BP1', 'TP53BP2', 'TP53INP1', 'TP53RK', 'TXN', 'UBE2I', 'USP7', 'WRN', 'XRCC6', 'YY1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 0.39581604928518943 Spearman Correlation: 0.3892707002743063 Coefficient of Determination: 0.15667034487173537 RMSE: 0.4181360589800679 NRMSE: 0.1119957302745595 MAPE: 444.5485769874783 Pearson Correlation: 0.3354316448696642 Spearman Correlation: 0.39079418443637975 Coefficient of Determination: 0.0889924166510283 RMSE: 0.39074309774077864 NRMSE: 0.1286820674265696 MAPE: 1935.303659840742 Predictor: ElasticNet Pearson Correlation: 0.3776652254199269 Spearman Correlation: 0.3987870668909219 Coefficient of Determination: 0.12439232285047164 RMSE: 0.4260628968194876 NRMSE: 0.11411889562595089 MAPE: 343.8969384621593 Pearson Correlation: 0.3242171425496943 Spearman Correlation: 0.373705122917335 Coefficient of Determination: 0.09351839953522467 RMSE: 0.389771262490419 NRMSE: 0.1283620162985078 MAPE: 1562.730645963122 Predictor: RandomForests Pearson Correlation: 0.4002644263589145 Spearman Correlation: 0.40497450069896646 Coefficient of Determination: 0.16004961124129435 RMSE: 0.41729747145918067 NRMSE: 0.11177111864448391 MAPE: 461.27083646157575 Pearson Correlation: 0.31002368498797994 Spearman Correlation: 0.3275400144735488 Coefficient of Determination: 0.07323066419917923 RMSE: 0.39410881337807624 NRMSE: 0.12979048686911782 MAPE: 1993.0446829362368 Protein: CTNNB1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'AKT1', 'APC2', 'APC', 'AR', 'AXIN1', 'AXIN2', 'BCL9', 'BTRC', 'CASP3', 'CBY1', 'CCND1', 'CDC73', 'CDH11', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDH5', 'CDH8', 'CHD8', 'CREBBP', 'CSNK1A1', 'CSNK1E', 'CTBP1', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNBIP1', 'CTNND1', 'DVL1', 'DVL2', 'DVL3', 'EGFR', 'EGF', 'EP300', 'ERBB2', 'AMER1', 'FBXW11', 'FER', 'FGFR1', 'FOXO1', 'FOXO3', 'FYN', 'FZD1', 'FZD2', 'FZD5', 'GSK3A', 'GSK3B', 'HNF4A', 'IGF1R', 'IQGAP1', 'JUN', 'JUP', 'KDR', 'KLF4', 'LEF1', 'LRP5', 'LRP6', 'MAPK9', 'MEN1', 'MET', 'MMP7', 'MYC', 'NLK', 'NOTCH1', 'PIK3CA', 'PIK3R1', 'PITX2', 'PSEN1', 'PTPN11', 'PTPN1', 'PYGO2', 'RUVBL1', 'SKP1', 'SMAD4', 'SMAD7', 'SMARCA4', 'SOX17', 'SOX2', 'SOX6', 'SOX9', 'SRC', 'TBL1X', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TGFBR1', 'TGFBR2', 'TJP1', 'TLE1', 'VCL', 'VEGFA', 'WNT1', 'WNT3A', 'WNT8A', 'WNT8B', 'YWHAZ', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.3112811379084542 Spearman Correlation: 0.27702119682276827 Coefficient of Determination: 0.096088282483907 RMSE: 0.6892728664680278 NRMSE: 0.13557688168135873 MAPE: 486.7277456154268 Pearson Correlation: 0.09146767137783766 Spearman Correlation: 0.05697117040299907 Coefficient of Determination: -0.12280094965927923 RMSE: 0.812237284314718 NRMSE: 0.20214461668816558 MAPE: 267.58127947683477 Predictor: ElasticNet Pearson Correlation: 0.23268561586764297 Spearman Correlation: 0.2201932159196043 Coefficient of Determination: 0.045108805891389436 RMSE: 0.708443334769591 NRMSE: 0.139347626823287 MAPE: 489.83813856895705 Pearson Correlation: 0.0377973481442018 Spearman Correlation: -0.001285456590734603 Coefficient of Determination: -0.12850458299159628 RMSE: 0.814297683005094 NRMSE: 0.20265739603421867 MAPE: 269.097526542669 Predictor: RandomForests Pearson Correlation: 0.32142925303514686 Spearman Correlation: 0.28355402586666173 Coefficient of Determination: 0.05408897829768611 RMSE: 0.7051042257540967 NRMSE: 0.1386908390547004 MAPE: 570.4898799936841 Pearson Correlation: 0.06666797182494871 Spearman Correlation: 0.02804666252460513 Coefficient of Determination: -0.11356653263220018 RMSE: 0.8088902870125373 NRMSE: 0.2013116365975305 MAPE: 281.1879918647997 Protein: CCNE1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['ABL1', 'BARD1', 'BRCA1', 'CABLES1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNH', 'CCT2', 'CCT3', 'CCT4', 'CCT6A', 'CCT7', 'CDC25A', 'CDC6', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDT1', 'CKS1B', 'CKS2', 'CUL1', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'EP400', 'FOXM1', 'HDAC1', 'IFNAR1', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'MNAT1', 'MYC', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PCNA', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB7', 'PSMC1', 'PSMC2', 'PSMC4', 'PSMC5', 'PSMD10', 'PSMD11', 'PSMD14', 'PSMD1', 'PSMD3', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSME3', 'PTK6', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RHOA', 'RPS27A', 'RRN3', 'SKP1', 'SKP2', 'STAT5A', 'STAT5B', 'TCP1', 'TFDP1', 'TP53', 'TP73', 'UBB', 'UBC', 'WEE1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.3238677485580211 Spearman Correlation: 0.19703902584944244 Coefficient of Determination: 0.10489031855604158 RMSE: 0.4851583441290774 NRMSE: 0.11708336610494906 MAPE: 118.22320557076473 Pearson Correlation: 0.35692754659172005 Spearman Correlation: 0.23222411553533195 Coefficient of Determination: 0.11878354906115918 RMSE: 0.39264626170146893 NRMSE: 0.2133958672065984 MAPE: 75.23931680350701 Predictor: ElasticNet Pearson Correlation: 0.21493173056217263 Spearman Correlation: 0.16428647440205796 Coefficient of Determination: 0.04024187419814873 RMSE: 0.5023729844278911 NRMSE: 0.12123777889999063 MAPE: 116.32638347862556 Pearson Correlation: 0.3197982354636666 Spearman Correlation: 0.21877039698687736 Coefficient of Determination: 0.07912269708041308 RMSE: 0.40138492123028524 NRMSE: 0.21814516450104907 MAPE: 76.6117011029755 Predictor: RandomForests Pearson Correlation: 0.3189978258463245 Spearman Correlation: 0.18977488956770736 Coefficient of Determination: 0.09443417273306398 RMSE: 0.48798378428425876 NRMSE: 0.11776523017695749 MAPE: 114.5049724683961 Pearson Correlation: 0.3346758934692657 Spearman Correlation: 0.2052980898096948 Coefficient of Determination: 0.1082941371442605 RMSE: 0.3949762479548892 NRMSE: 0.21466217096554288 MAPE: 76.67433307050828 Protein: CCND1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ACTL6A', 'AKT1', 'ARID1A', 'ARID2', 'AR', 'ATF2', 'BRD2', 'BTG2', 'CCNA1', 'CCNB1', 'CCNE1', 'CCNH', 'CDC25A', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CKS1B', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUL1', 'DNMT3A', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'AGO2', 'EP300', 'ESR1', 'FOS', 'FOXA1', 'FOXM1', 'GADD45A', 'GATA3', 'GLI1', 'GLI3', 'GSK3B', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC4', 'HIST1H2BA', 'HIST2H2BE', 'HNF1A', 'IFNAR1', 'JAK2', 'JUN', 'KAT2B', 'LEF1', 'LYN', 'MAML1', 'MYB', 'MYC', 'NOTCH1', 'PBRM1', 'PCNA', 'PRMT5', 'PSMA6', 'PSMC6', 'PSMD10', 'PSMD6', 'PSMD7', 'PSME3', 'PTK6', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RELA', 'RUNX1', 'RUNX3', 'SKP1', 'SKP2', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'SUV39H1', 'TCF7L2', 'TFDP1', 'TP53', 'WDR77', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.2185924438869003 Spearman Correlation: 0.13432541946965046 Coefficient of Determination: 0.047782656524447464 RMSE: 0.23297027990781605 NRMSE: 0.14005499507509592 MAPE: 617.7858278732297 Pearson Correlation: 0.11565666407110717 Spearman Correlation: 0.09175225735736484 Coefficient of Determination: -0.00284502456278779 RMSE: 0.23576428395160057 NRMSE: 0.1824010366649135 MAPE: 420.34826904719455 Predictor: ElasticNet Pearson Correlation: 0.057182983719848104 Spearman Correlation: 0.06282701452592272 Coefficient of Determination: 0.00020516424807182077 RMSE: 0.23871951441085837 NRMSE: 0.14351126859774344 MAPE: 629.9903455117615 Pearson Correlation: 0.07396608500887568 Spearman Correlation: 0.07880251820802964 Coefficient of Determination: -0.0016823348047014797 RMSE: 0.2356275727893868 NRMSE: 0.18229526891547534 MAPE: 420.8386075589096 Predictor: RandomForests Pearson Correlation: 0.21864881735270517 Spearman Correlation: 0.1469716802441907 Coefficient of Determination: 0.03178335494102014 RMSE: 0.2349193281149656 NRMSE: 0.1412267064932282 MAPE: 626.2717220211755 Pearson Correlation: 0.04056417477108755 Spearman Correlation: 0.10633514021250545 Coefficient of Determination: -0.0057199457247261165 RMSE: 0.23610198251498946 NRMSE: 0.18266230002088063 MAPE: 418.14792369740593 Protein: ERBB2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ADAM17', 'ADRB2', 'AREG', 'ARHGEF11', 'ARHGEF12', 'BTC', 'CBL', 'CCND1', 'CD44', 'CDC37', 'CDH1', 'CTNNB1', 'CTNND1', 'CUL5', 'DIAPH1', 'DOCK7', 'EGFR', 'EGF', 'ERBB2IP', 'ERBB3', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FYN', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IL6R', 'IL6', 'INS', 'JAK1', 'JAK2', 'KRAS', 'LRPPRC', 'MAP2K1', 'MAPK8', 'MATK', 'MEMO1', 'MUC1', 'MUC4', 'MYC', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'PGAP3', 'PGR', 'PIK3CA', 'PIK3CB', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PLXNB1', 'PRKACA', 'PTEN', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'RHOA', 'RHOB', 'RHOC', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'RPS27A', 'SEMA4D', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SRC', 'STAT1', 'STAT3', 'STUB1', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TGFA', 'TP53', 'UBA52', 'UBB', 'UBC', 'VEGFA', 'YES1', 'YY1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.37601494224784937 Spearman Correlation: 0.40986364910281836 Coefficient of Determination: 0.1413872367936534 RMSE: 0.910869253208015 NRMSE: 0.16346378572726072 MAPE: 458.9485627878623 Pearson Correlation: 0.22715528882498479 Spearman Correlation: 0.29551676425680373 Coefficient of Determination: 0.02726316155932751 RMSE: 1.0426906834966658 NRMSE: 0.17763951879937065 MAPE: 1726.0935385645791 Predictor: ElasticNet Pearson Correlation: 0.3599122061700917 Spearman Correlation: 0.4172541001681305 Coefficient of Determination: 0.12509819634323538 RMSE: 0.9194688664980972 NRMSE: 0.16500706467672185 MAPE: 390.23966410939875 Pearson Correlation: 0.22061222742733114 Spearman Correlation: 0.25348348200876436 Coefficient of Determination: 0.03595839847203619 RMSE: 1.0380199471144926 NRMSE: 0.17684378198451245 MAPE: 2331.699970711735 Predictor: RandomForests Pearson Correlation: 0.36891665215678326 Spearman Correlation: 0.4236791085260438 Coefficient of Determination: 0.1268775556696512 RMSE: 0.9185333911149566 NRMSE: 0.1648391850968104 MAPE: 404.4371958127825 Pearson Correlation: 0.2803128301285419 Spearman Correlation: 0.30344778818884666 Coefficient of Determination: 0.06798721543494379 RMSE: 1.0206309791062405 NRMSE: 0.17388128509229442 MAPE: 1877.6507070429907 Protein: ERBB3 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AKT2', 'ANGPT1', 'ANGPT2', 'AREG', 'AR', 'BDNF', 'BMP4', 'BTC', 'CBLB', 'CBL', 'CCND1', 'CDH1', 'CSF1', 'CSK', 'CTNNB1', 'DCN', 'DOCK7', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FGF10', 'FGF19', 'FGF1', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FIGF', 'FLNA', 'FOXO3', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IGF1', 'IGF2', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'JAK1', 'JAK2', 'KITLG', 'KRAS', 'LAMA1', 'LAMB1', 'LAMC2', 'MAP2K1', 'MAPK8', 'MET', 'MUC4', 'NGF', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NTF3', 'PA2G4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PRKACA', 'PTEN', 'PTPN11', 'RNF41', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SOX10', 'SRC', 'TGFA', 'VEGFA', 'VEGFB', 'VEGFC', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.3920012117202065 Spearman Correlation: 0.36688123699296904 Coefficient of Determination: 0.15366432598845414 RMSE: 0.4095068519326484 NRMSE: 0.1105141458256708 MAPE: 208.74183052951926 Pearson Correlation: -0.004163343763897823 Spearman Correlation: 0.24625308661250925 Coefficient of Determination: -3882997946946.676 RMSE: 1020293.3729977149 NRMSE: 376548.9882224672 MAPE: 35716919.371215686 Predictor: ElasticNet Pearson Correlation: 0.323650218431571 Spearman Correlation: 0.33621072929401824 Coefficient of Determination: 0.0919199985666731 RMSE: 0.42418167712784066 NRMSE: 0.11447445995456465 MAPE: 201.0132831782516 Pearson Correlation: 0.32833711850864483 Spearman Correlation: 0.3129818281832673 Coefficient of Determination: 0.08237136535668699 RMSE: 0.49599233386178027 NRMSE: 0.18305069544166472 MAPE: 279.0377958441467 Predictor: RandomForests Pearson Correlation: 0.34072076076224916 Spearman Correlation: 0.33999636519278087 Coefficient of Determination: 0.09093966124713437 RMSE: 0.4244105825963436 NRMSE: 0.11453623497055532 MAPE: 203.2017678087512 Pearson Correlation: 0.35549235630124243 Spearman Correlation: 0.3128915076844215 Coefficient of Determination: 0.08127710045586267 RMSE: 0.49628797922013335 NRMSE: 0.18315980617736755 MAPE: 285.8076538652571 Fold: 3 Protein: RB1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AATF', 'ABL1', 'AKT1', 'AR', 'ASF1A', 'ATF2', 'BGLAP', 'CASP3', 'CBX4', 'CCNA1', 'CCNA2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CEBPA', 'COL1A1', 'CREBBP', 'CTBP1', 'DNMT1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'ELF1', 'EP300', 'FOXM1', 'FZR1', 'GNB2L1', 'H1F0', 'H2AFV', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HIST1H2BA', 'HIST2H2AC', 'HIST2H2BE', 'HMGA1', 'HMGA2', 'HSP90AA1', 'ID2', 'JUN', 'MAPK14', 'MAPK1', 'MAPK3', 'MDM2', 'MEF2C', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NFYC', 'PCNA', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP2CA', 'PPP2CB', 'PRIM1', 'PRIM2', 'RAF1', 'RBBP4', 'RUNX2', 'SIRT1', 'SKP2', 'SMARCA2', 'SMC2', 'SMC4', 'SP100', 'SP1', 'SP3', 'SPI1', 'SUV39H1', 'TAF1', 'TBP', 'TERT', 'TFDP1', 'TP53BP1', 'TP53', 'TP73', 'YAP1', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.12236293282519034 Spearman Correlation: 0.14914047536204267 Coefficient of Determination: -0.031245780130395584 RMSE: 0.24431080805534527 NRMSE: 0.08934713577214207 MAPE: 440.4522853715494 Pearson Correlation: 0.06162307402350104 Spearman Correlation: 0.2054506152212389 Coefficient of Determination: -0.14674795825290876 RMSE: 0.2373729641123293 NRMSE: 0.1665611547723938 MAPE: 364.3072873677648 Predictor: ElasticNet Pearson Correlation: 0.13040614309809975 Spearman Correlation: 0.13948037034215377 Coefficient of Determination: 0.008003401049036185 RMSE: 0.23961647750783946 NRMSE: 0.08763036772521923 MAPE: 199.11336922175477 Pearson Correlation: 0.14812323954982248 Spearman Correlation: 0.15820450945046202 Coefficient of Determination: -0.019566434795023513 RMSE: 0.22382316361075508 NRMSE: 0.157053456931077 MAPE: 169.51868404891636 Predictor: RandomForests Pearson Correlation: 0.23003634260033662 Spearman Correlation: 0.16133090271540287 Coefficient of Determination: 0.04009185897667511 RMSE: 0.23570914113216984 NRMSE: 0.0862014120582833 MAPE: 180.1573126159203 Pearson Correlation: -0.048311781175006965 Spearman Correlation: 0.2091516699359617 Coefficient of Determination: -0.060701485171136715 RMSE: 0.22829366150440736 NRMSE: 0.16019034025036652 MAPE: 150.31993249180573 Protein: CDH1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ACTA1', 'ACTN1', 'ADAM10', 'ADAM15', 'CA2', 'CASP3', 'CBLL1', 'CDC42', 'CDH17', 'CDH3', 'CDH5', 'CTBP1', 'CTNNA1', 'CTNNB1', 'CTNND1', 'CTTN', 'DLG1', 'EFNA1', 'EGFR', 'EGF', 'ENAH', 'EPCAM', 'EPHA2', 'EXOC3', 'EXOC4', 'FER', 'FLOT1', 'FLOT2', 'FMN1', 'FYN', 'GDNF', 'GNA12', 'GNA13', 'HGF', 'HGS', 'IGF1R', 'IGF1', 'IGF2', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'ITGA6', 'ITGAE', 'ITGB4', 'ITGB7', 'AJUBA', 'JUP', 'KIFC3', 'KLK7', 'KLRG1', 'LAMB1', 'LAMC2', 'LIMA1', 'MAPK1', 'MAPK3', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MLLT4', 'MMP3', 'MMP7', 'MMP9', 'MYO6', 'NCSTN', 'NUMB', 'PARD6A', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PLEKHA7', 'PLG', 'PRKCI', 'PRKCZ', 'PSEN1', 'PVRL1', 'PVRL2', 'RAB5A', 'RAB7A', 'RAC1', 'RAP1A', 'RET', 'RHOA', 'SKIL', 'SMAD3', 'SMAD4', 'SNAI1', 'SNAI2', 'SNAI3', 'SRC', 'STX4', 'TJP1', 'TWIST1', 'VASP', 'VCL', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.5840166596711545 Spearman Correlation: 0.4871494918752344 Coefficient of Determination: 0.3410754571504657 RMSE: 0.9535597723740292 NRMSE: 0.1518358925470573 MAPE: 335.274820650952 Pearson Correlation: -0.0708998923174018 Spearman Correlation: 0.30462830803417695 Coefficient of Determination: -1.2379479661694984e+16 RMSE: 104758654.86283416 NRMSE: 20595025.13719069 MAPE: 901820806.0307952 Predictor: ElasticNet Pearson Correlation: 0.5603540657733926 Spearman Correlation: 0.475943551706354 Coefficient of Determination: 0.268522221682025 RMSE: 1.00468668791491 NRMSE: 0.15997686186983054 MAPE: 259.94470037880143 Pearson Correlation: 0.48873255434447244 Spearman Correlation: 0.3016111684153386 Coefficient of Determination: 0.2055313826170171 RMSE: 0.8392224464414726 NRMSE: 0.16498691590482298 MAPE: 246.45449379063876 Predictor: RandomForests Pearson Correlation: 0.5664946174580228 Spearman Correlation: 0.4714434267470823 Coefficient of Determination: 0.3208764707971927 RMSE: 0.9680648872010701 NRMSE: 0.15414555065142352 MAPE: 240.63568193471917 Pearson Correlation: 0.59750124064123 Spearman Correlation: 0.32084328458650707 Coefficient of Determination: 0.3410404683964994 RMSE: 0.7643074451833858 NRMSE: 0.15025900310293433 MAPE: 176.60312307461234 Protein: CDH2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ADAM10', 'AFP', 'AHSG', 'ALB', 'APLP2', 'APOA1', 'APOB', 'APOE', 'APP', 'AXIN1', 'BDNF', 'BMP4', 'BNIP2', 'CALU', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH17', 'CDH18', 'CDH1', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDON', 'CREBBP', 'CSF1', 'CST3', 'CTNNA1', 'CTNNA2', 'CTNNB1', 'CTNND1', 'CYR61', 'FAM20C', 'FBN1', 'FER', 'FGFR1', 'FN1', 'FSTL1', 'GAS6', 'GJA1', 'GOLM1', 'GPC3', 'GRIA2', 'HSP90B1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL6', 'ITIH2', 'JUP', 'KIF5B', 'KNG1', 'KTN1', 'LAMB1', 'LAMC1', 'LGALS1', 'LRP5', 'LTBP1', 'MAP2K6', 'MAPK11', 'MAPK14', 'MATN3', 'MEF2A', 'MEF2C', 'MEF2D', 'MET', 'MFGE8', 'MSLN', 'NTRK2', 'P4HB', 'PCSK9', 'PIK3CA', 'PIK3R1', 'PTPN11', 'PTPN1', 'RAC1', 'RHOA', 'ROBO1', 'SCG2', 'SDC2', 'SERPINA1', 'SLIT1', 'SNAI1', 'SNAI2', 'SPAG9', 'SPARCL1', 'SPP1', 'STC2', 'TCF3', 'TIMP1', 'TMEM132A', 'TNC', 'VCAN', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.3371247042215096 Spearman Correlation: 0.3415985237193805 Coefficient of Determination: 0.11365306560889432 RMSE: 0.35892029673169573 NRMSE: 0.13005300990350596 MAPE: 1084.3444745808615 Pearson Correlation: 0.05143496178060024 Spearman Correlation: 0.0500662112981838 Coefficient of Determination: -0.10241558231300352 RMSE: 0.34856401490184075 NRMSE: 0.18365967021194216 MAPE: 2588.302943660428 Predictor: ElasticNet Pearson Correlation: 0.28421804722276045 Spearman Correlation: 0.30792402256404466 Coefficient of Determination: 0.07117552170895936 RMSE: 0.36742015056653066 NRMSE: 0.13313289026977704 MAPE: 581.1342337718575 Pearson Correlation: 0.07421092303708769 Spearman Correlation: 0.09342565329594608 Coefficient of Determination: -0.014834607249881948 RMSE: 0.33443175826529736 NRMSE: 0.1762133318572815 MAPE: 1485.4662030057075 Predictor: RandomForests Pearson Correlation: 0.3246350093408846 Spearman Correlation: 0.3383755499021339 Coefficient of Determination: 0.10156556466858169 RMSE: 0.36135938572137183 NRMSE: 0.13093680184121018 MAPE: 787.0550259882198 Pearson Correlation: 0.07286626545537635 Spearman Correlation: 0.07197658442999845 Coefficient of Determination: -0.044020530704141025 RMSE: 0.3392066808376299 NRMSE: 0.1787292562425601 MAPE: 1809.7962286814798 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.3925836158430096 Spearman Correlation: 0.38189784455617487 Coefficient of Determination: 0.15409219008905617 RMSE: 0.19545299325434787 NRMSE: 0.1371253530717488 MAPE: 476.6654588626865 Pearson Correlation: 0.26640368218459504 Spearman Correlation: 0.31514108017453535 Coefficient of Determination: 0.0523664189197427 RMSE: 0.18333092946744273 NRMSE: 0.1594639587598552 MAPE: 147.86419027878517 Predictor: ElasticNet Pearson Correlation: 0.29283839991444177 Spearman Correlation: 0.303397902104558 Coefficient of Determination: 0.05681688913605831 RMSE: 0.20638532623625663 NRMSE: 0.1447952280380091 MAPE: 193.0711576645526 Pearson Correlation: 0.2790227734000401 Spearman Correlation: 0.3222321853148386 Coefficient of Determination: 0.04974725586683204 RMSE: 0.18358410869011216 NRMSE: 0.1596841777989442 MAPE: 106.09793057357864 Predictor: RandomForests Pearson Correlation: 0.322824037581475 Spearman Correlation: 0.32256981954304026 Coefficient of Determination: 0.09960215539600381 RMSE: 0.20164990968535823 NRMSE: 0.1414729680118414 MAPE: 307.7470613347643 Pearson Correlation: 0.25833465266500605 Spearman Correlation: 0.3005132266174528 Coefficient of Determination: 0.058860643862032824 RMSE: 0.18270165716779274 NRMSE: 0.15891660839005345 MAPE: 122.19313182390943 Protein: PTEN Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AR', 'BCR', 'CD79A', 'CD79B', 'CDIPT', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'DLG1', 'EGFR', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'FOXO3', 'FOXO4', 'FRK', 'GRB2', 'HRAS', 'INPP4A', 'INPP4B', 'INPP5B', 'INPP5D', 'INPP5J', 'INPP5K', 'INPPL1', 'IPMK', 'IRS1', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'MAST2', 'MDM2', 'MDM4', 'MKRN1', 'MTOR', 'MYC', 'NEDD4', 'NOTCH1', 'OCRL', 'OTUD3', 'PARK7', 'PDGFB', 'PDGFRB', 'PI4K2A', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIKFYVE', 'PIP4K2A', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PML', 'PREX2', 'PSMA6', 'PSMA7', 'PSMB9', 'PSMC6', 'PSMD10', 'PSMD5', 'PSME3', 'PTK2', 'RICTOR', 'RNF146', 'ROCK1', 'ROCK2', 'RPS27A', 'RPS6KB1', 'SACM1L', 'SHC1', 'SLC9A3R1', 'SLC9A3R2', 'SOS1', 'STK11', 'STUB1', 'SYNJ1', 'SYNJ2', 'TNKS2', 'TNKS', 'TNRC6A', 'TNRC6B', 'TP53', 'UBB', 'UBC', 'USP13', 'USP7', 'WWP2', 'XIAP', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 0.28371677678613955 Spearman Correlation: 0.26339309937793404 Coefficient of Determination: 0.08049520932079735 RMSE: 0.6034354346624985 NRMSE: 0.09435312870963936 MAPE: 468.8959499525306 Pearson Correlation: 0.1386960694516803 Spearman Correlation: 0.11902275312485383 Coefficient of Determination: -0.03924493550495001 RMSE: 0.4801108464192475 NRMSE: 0.11478765514733599 MAPE: 118.51458463021747 Predictor: ElasticNet Pearson Correlation: 0.22870737919805995 Spearman Correlation: 0.23191946582442954 Coefficient of Determination: 0.04135580041983333 RMSE: 0.6161444421166751 NRMSE: 0.09634030836004613 MAPE: 366.5181439554692 Pearson Correlation: 0.04751276395252235 Spearman Correlation: 0.0334667142903579 Coefficient of Determination: -0.04972860171578852 RMSE: 0.48252639426576405 NRMSE: 0.11536517818241382 MAPE: 98.90657284309529 Predictor: RandomForests Pearson Correlation: 0.29653512023088574 Spearman Correlation: 0.255501557813122 Coefficient of Determination: 0.0804580954897991 RMSE: 0.6034476127256159 NRMSE: 0.0943550328708648 MAPE: 406.19293255350436 Pearson Correlation: 0.13024138167625196 Spearman Correlation: 0.11116802621372976 Coefficient of Determination: -0.028499942602396633 RMSE: 0.47762240922947075 NRMSE: 0.11419270530996767 MAPE: 106.99056218449662 Protein: BRCA2 Protein Interaction Partners Count: 100 x_train_column_count: 99 x_train columns: ['ATM', 'ATRIP', 'ATR', 'BARD1', 'BLM', 'BRCA1', 'BRIP1', 'SLX4', 'RHNO1', 'RMI2', 'CDK2', 'CDK4', 'CHEK1', 'CHEK2', 'DMC1', 'DNA2', 'EME1', 'EME2', 'EXO1', 'FANCD2', 'FANCE', 'FANCG', 'FANCI', 'GEN1', 'H2AFX', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HUS1', 'KAT5', 'SPIDR', 'MLH1', 'MLH3', 'MND1', 'MRE11A', 'MSH4', 'MSH5', 'MUS81', 'NBN', 'PALB2', 'PARP1', 'PCNA', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'PSMC3IP', 'RAD17', 'RAD1', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD9A', 'RAD9B', 'RBBP8', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SPO11', 'SYCP3', 'TEX15', 'TOP3A', 'TOPBP1', 'TP53', 'UBA52', 'UBB', 'UBC', 'WRN', 'XRCC2', 'XRCC3', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.20932781179456988 Spearman Correlation: 0.17573368791332022 Coefficient of Determination: 0.030703640958690825 RMSE: 0.18710978717781587 NRMSE: 0.12610855631643159 MAPE: 141.2167944082297 Pearson Correlation: 0.07627594518298594 Spearman Correlation: 0.10738688134240572 Coefficient of Determination: 0.001758748378371977 RMSE: 0.21394303477954024 NRMSE: 0.1471521468471069 MAPE: 175.85264240903913 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: RandomForests Pearson Correlation: 0.22942924848981583 Spearman Correlation: 0.1988761522235641 Coefficient of Determination: 0.030235127697582187 RMSE: 0.1871550018457563 NRMSE: 0.12613903017129668 MAPE: 121.31846389319836 Pearson Correlation: 0.15145771011873727 Spearman Correlation: 0.21577536135463107 Coefficient of Determination: 0.012924827556066387 RMSE: 0.2127431129608248 NRMSE: 0.14632682868774446 MAPE: 120.50848534395581 Protein: CDKN2A Protein Interaction Partners Count: 100 x_train_column_count: 100 x_train columns: ['ABL1', 'AKT1', 'ARF1', 'BMI1', 'BRCA1', 'CBX7', 'CCND1', 'CCND2', 'CCND3', 'CCNL1', 'CDC45', 'CDC6', 'CDC7', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPB', 'CTCF', 'DAXX', 'E2F1', 'E2F2', 'E2F3', 'EGFR', 'EGR1', 'AGO1', 'AGO3', 'AGO4', 'ERBB2', 'EZH2', 'FOXM1', 'GMNN', 'HDAC1', 'HIF1A', 'HRAS', 'HUWE1', 'IL6', 'KRAS', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAX', 'MCM10', 'MCM2', 'MCM5', 'MDM2', 'MDM4', 'MGMT', 'MLH1', 'MOV10', 'MRAS', 'MTAP', 'MYCN', 'MYC', 'NPM1', 'NRAS', 'ORC5', 'PIK3CA', 'PIK3R1', 'PTEN', 'RASSF1', 'RB1', 'RPS27A', 'RRAS2', 'RRAS', 'RUNX3', 'SMAD3', 'SMAD4', 'SMARCA4', 'SUMO1', 'SUMO2', 'SUMO3', 'TBX2', 'TERT', 'TFDP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TP53', 'TP63', 'TRIP12', 'TWIST1', 'UBA52', 'UBB', 'UBC', 'UBE2I', 'USP7', 'VEGFA', 'WRN', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.2614862207136925 Spearman Correlation: 0.17776680451268354 Coefficient of Determination: 0.06837504355503832 RMSE: 0.6443608120074251 NRMSE: 0.15043911374846497 MAPE: 267.5736709638354 Pearson Correlation: 0.13534477451819216 Spearman Correlation: 0.051678739020255236 Coefficient of Determination: 0.012356365632377408 RMSE: 0.6524723738593355 NRMSE: 0.20143631683471813 MAPE: 175.1879437850417 Predictor: ElasticNet Pearson Correlation: 0.14810965870306902 Spearman Correlation: 0.13948466687673133 Coefficient of Determination: 0.018401428079684035 RMSE: 0.6614172573457643 NRMSE: 0.1544212872025038 MAPE: 301.5530981084476 Pearson Correlation: 0.0034458838343258513 Spearman Correlation: 0.028457817276018316 Coefficient of Determination: -0.011651473969317205 RMSE: 0.6603549732112686 NRMSE: 0.20386989386288432 MAPE: 170.8604481619005 Predictor: RandomForests Pearson Correlation: 0.24955280497386445 Spearman Correlation: 0.17305840876313677 Coefficient of Determination: 0.044884476399597806 RMSE: 0.6524338946761128 NRMSE: 0.15232393880185674 MAPE: 297.10431796238186 Pearson Correlation: 0.08231914660178494 Spearman Correlation: 0.0748583959743863 Coefficient of Determination: 0.002000733684781264 RMSE: 0.6558841026884205 NRMSE: 0.20248961214177408 MAPE: 170.34793820026152 Protein: TP53 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AKT1', 'APAF1', 'ATM', 'ATR', 'AURKA', 'AURKB', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2L1', 'BCL2', 'BCL6', 'BRCA1', 'CASP8', 'CCNA2', 'CCNE1', 'CCNG1', 'CDC25C', 'CDK2', 'CDK5', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CHEK1', 'CHEK2', 'COPS5', 'CREBBP', 'DDB2', 'DDX5', 'DYRK2', 'E2F4', 'EGR1', 'EHMT2', 'EP300', 'EZH2', 'FZR1', 'GADD45A', 'GLS2', 'GSK3B', 'HDAC1', 'HDAC2', 'HIF1A', 'HIPK2', 'HSP90AA1', 'HSPA1A', 'IGFBP3', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'MAPK14', 'MAPK1', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MCL1', 'MDM2', 'MDM4', 'MSH2', 'NGFR', 'NPM1', 'PLK3', 'PMAIP1', 'PPP1R13B', 'PPP1R13L', 'PRKDC', 'PRMT5', 'PTEN', 'RB1', 'RCHY1', 'DROSHA', 'RPA1', 'RRM2B', 'SETD7', 'SETD8', 'SFN', 'SIRT1', 'SMYD2', 'SNAI1', 'SNAI2', 'SP1', 'STAT3', 'STK11', 'SUMO1', 'SUMO2', 'TBP', 'TNFRSF10A', 'TNFRSF10B', 'TP53BP1', 'TP53BP2', 'TP53INP1', 'TP53RK', 'TXN', 'UBE2I', 'USP7', 'WRN', 'XRCC6', 'YY1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.39609865175222936 Spearman Correlation: 0.3945355498147517 Coefficient of Determination: 0.15689410821945549 RMSE: 0.4132971695941072 NRMSE: 0.09932640461285923 MAPE: 759.4408697036954 Pearson Correlation: 0.33264468332199904 Spearman Correlation: 0.39358938545424854 Coefficient of Determination: 0.08672386878427207 RMSE: 0.4113600275327455 NRMSE: 0.15339581664276836 MAPE: 418.69792585824473 Predictor: ElasticNet Pearson Correlation: 0.3800298127434854 Spearman Correlation: 0.40029539500744954 Coefficient of Determination: 0.12579962839679448 RMSE: 0.4208495453611966 NRMSE: 0.10114144324950652 MAPE: 605.9128252623008 Pearson Correlation: 0.32472984355627904 Spearman Correlation: 0.38452382621916703 Coefficient of Determination: 0.08584727299656669 RMSE: 0.4115573993725046 NRMSE: 0.15346941643982137 MAPE: 309.21723596595945 Predictor: RandomForests Pearson Correlation: 0.4014733832498487 Spearman Correlation: 0.4053477197660647 Coefficient of Determination: 0.16100356370409563 RMSE: 0.4122886954463559 NRMSE: 0.09908404120316172 MAPE: 788.744847198838 Pearson Correlation: 0.3067472275342206 Spearman Correlation: 0.35436479587132735 Coefficient of Determination: 0.06586148229547462 RMSE: 0.41603194062535254 NRMSE: 0.15513796920052375 MAPE: 459.4802705998319 Protein: CTNNB1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'AKT1', 'APC2', 'APC', 'AR', 'AXIN1', 'AXIN2', 'BCL9', 'BTRC', 'CASP3', 'CBY1', 'CCND1', 'CDC73', 'CDH11', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDH5', 'CDH8', 'CHD8', 'CREBBP', 'CSNK1A1', 'CSNK1E', 'CTBP1', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNBIP1', 'CTNND1', 'DVL1', 'DVL2', 'DVL3', 'EGFR', 'EGF', 'EP300', 'ERBB2', 'AMER1', 'FBXW11', 'FER', 'FGFR1', 'FOXO1', 'FOXO3', 'FYN', 'FZD1', 'FZD2', 'FZD5', 'GSK3A', 'GSK3B', 'HNF4A', 'IGF1R', 'IQGAP1', 'JUN', 'JUP', 'KDR', 'KLF4', 'LEF1', 'LRP5', 'LRP6', 'MAPK9', 'MEN1', 'MET', 'MMP7', 'MYC', 'NLK', 'NOTCH1', 'PIK3CA', 'PIK3R1', 'PITX2', 'PSEN1', 'PTPN11', 'PTPN1', 'PYGO2', 'RUVBL1', 'SKP1', 'SMAD4', 'SMAD7', 'SMARCA4', 'SOX17', 'SOX2', 'SOX6', 'SOX9', 'SRC', 'TBL1X', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TGFBR1', 'TGFBR2', 'TJP1', 'TLE1', 'VCL', 'VEGFA', 'WNT1', 'WNT3A', 'WNT8A', 'WNT8B', 'YWHAZ', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.3178113873558754 Spearman Correlation: 0.2765743591716942 Coefficient of Determination: 0.10100354086062724 RMSE: 0.7293178129209602 NRMSE: 0.1434535430607711 MAPE: 381.2504543432882 Pearson Correlation: 0.09788582316270085 Spearman Correlation: 0.09563991174535466 Coefficient of Determination: -0.07434143756776135 RMSE: 0.6353465065282766 NRMSE: 0.20770424222049644 MAPE: 1903.5013921364687 Predictor: ElasticNet Pearson Correlation: 0.22272636012317149 Spearman Correlation: 0.21583301404598643 Coefficient of Determination: 0.04134984731351199 RMSE: 0.7531264548994349 NRMSE: 0.1481365961643263 MAPE: 397.69995314161986 Pearson Correlation: 0.055173968936971074 Spearman Correlation: 0.0698489103976312 Coefficient of Determination: -0.023722019033042274 RMSE: 0.6201982052297287 NRMSE: 0.20275203675495393 MAPE: 1331.2896375668909 Predictor: RandomForests Pearson Correlation: 0.28999442910229584 Spearman Correlation: 0.27571461520957113 Coefficient of Determination: 0.053919132897934374 RMSE: 0.7481728773870784 NRMSE: 0.14716224968274555 MAPE: 420.0563725780187 Pearson Correlation: 0.040866039427540565 Spearman Correlation: 0.046656048040476926 Coefficient of Determination: -0.020350531080821188 RMSE: 0.6191760941602377 NRMSE: 0.20241789341274236 MAPE: 1495.134608251972 Protein: CCNE1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['ABL1', 'BARD1', 'BRCA1', 'CABLES1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNH', 'CCT2', 'CCT3', 'CCT4', 'CCT6A', 'CCT7', 'CDC25A', 'CDC6', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDT1', 'CKS1B', 'CKS2', 'CUL1', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'EP400', 'FOXM1', 'HDAC1', 'IFNAR1', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'MNAT1', 'MYC', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PCNA', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB7', 'PSMC1', 'PSMC2', 'PSMC4', 'PSMC5', 'PSMD10', 'PSMD11', 'PSMD14', 'PSMD1', 'PSMD3', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSME3', 'PTK6', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RHOA', 'RPS27A', 'RRN3', 'SKP1', 'SKP2', 'STAT5A', 'STAT5B', 'TCP1', 'TFDP1', 'TP53', 'TP73', 'UBB', 'UBC', 'WEE1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.3485671411627861 Spearman Correlation: 0.2198327804441609 Coefficient of Determination: 0.12149894679478657 RMSE: 0.4896586331413678 NRMSE: 0.11816942180692806 MAPE: 98.6191313791448 Pearson Correlation: 0.18402134061902112 Spearman Correlation: 0.20936500085663903 Coefficient of Determination: 0.0049208989097503375 RMSE: 0.3639897351639789 NRMSE: 0.15855283145183557 MAPE: 142.8088284298093 Predictor: ElasticNet Pearson Correlation: 0.24748389699320064 Spearman Correlation: 0.16815648886909992 Coefficient of Determination: 0.05425144189128339 RMSE: 0.5080542826446293 NRMSE: 0.1226088478038056 MAPE: 98.7222527688381 Pearson Correlation: 0.14380178517809328 Spearman Correlation: 0.20291940136099768 Coefficient of Determination: 0.0023860701371534176 RMSE: 0.3644530474862826 NRMSE: 0.1587546489028543 MAPE: 138.9269885548224 Predictor: RandomForests Pearson Correlation: 0.3378715812088578 Spearman Correlation: 0.19361832706967708 Coefficient of Determination: 0.10615689583265797 RMSE: 0.49391580061067497 NRMSE: 0.11919680493536573 MAPE: 96.93001216225859 Pearson Correlation: 0.18297154527472906 Spearman Correlation: 0.21282401056628045 Coefficient of Determination: 0.027560942306205316 RMSE: 0.3598251628783236 NRMSE: 0.15673875631760403 MAPE: 140.44265361763186 Protein: CCND1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ACTL6A', 'AKT1', 'ARID1A', 'ARID2', 'AR', 'ATF2', 'BRD2', 'BTG2', 'CCNA1', 'CCNB1', 'CCNE1', 'CCNH', 'CDC25A', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CKS1B', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUL1', 'DNMT3A', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'AGO2', 'EP300', 'ESR1', 'FOS', 'FOXA1', 'FOXM1', 'GADD45A', 'GATA3', 'GLI1', 'GLI3', 'GSK3B', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC4', 'HIST1H2BA', 'HIST2H2BE', 'HNF1A', 'IFNAR1', 'JAK2', 'JUN', 'KAT2B', 'LEF1', 'LYN', 'MAML1', 'MYB', 'MYC', 'NOTCH1', 'PBRM1', 'PCNA', 'PRMT5', 'PSMA6', 'PSMC6', 'PSMD10', 'PSMD6', 'PSMD7', 'PSME3', 'PTK6', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RELA', 'RUNX1', 'RUNX3', 'SKP1', 'SKP2', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'SUV39H1', 'TCF7L2', 'TFDP1', 'TP53', 'WDR77', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.22986872483032814 Spearman Correlation: 0.1609108824304443 Coefficient of Determination: 0.05283909539780873 RMSE: 0.2381049351405747 NRMSE: 0.14314180131330315 MAPE: 623.4338512911952 Pearson Correlation: 0.008549171713064834 Spearman Correlation: 0.023705164411732944 Coefficient of Determination: -0.02816038641619345 RMSE: 0.2126722616284383 NRMSE: 0.20152204678009558 MAPE: 477.5015486882162 Predictor: ElasticNet Pearson Correlation: 0.10155629943123531 Spearman Correlation: 0.10631180654543107 Coefficient of Determination: 0.0023790025304251117 RMSE: 0.24436517057764276 NRMSE: 0.146905273819987 MAPE: 623.645984987241 Pearson Correlation: 0.02225160254772228 Spearman Correlation: 0.01589363486559819 Coefficient of Determination: -0.0005256675195404181 RMSE: 0.2097947100183238 NRMSE: 0.19879536260536873 MAPE: 465.89802810214167 Predictor: RandomForests Pearson Correlation: 0.23010632742291487 Spearman Correlation: 0.16436990726214729 Coefficient of Determination: 0.03420069136828785 RMSE: 0.24043625801076426 NRMSE: 0.14454332520395588 MAPE: 634.306260089243 Pearson Correlation: 0.015031730655260577 Spearman Correlation: 0.023650441281526623 Coefficient of Determination: -0.0026259726707913433 RMSE: 0.21001479528075875 NRMSE: 0.19900390899600953 MAPE: 477.57324012991677 Protein: ERBB2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ADAM17', 'ADRB2', 'AREG', 'ARHGEF11', 'ARHGEF12', 'BTC', 'CBL', 'CCND1', 'CD44', 'CDC37', 'CDH1', 'CTNNB1', 'CTNND1', 'CUL5', 'DIAPH1', 'DOCK7', 'EGFR', 'EGF', 'ERBB2IP', 'ERBB3', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FYN', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IL6R', 'IL6', 'INS', 'JAK1', 'JAK2', 'KRAS', 'LRPPRC', 'MAP2K1', 'MAPK8', 'MATK', 'MEMO1', 'MUC1', 'MUC4', 'MYC', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'PGAP3', 'PGR', 'PIK3CA', 'PIK3CB', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PLXNB1', 'PRKACA', 'PTEN', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'RHOA', 'RHOB', 'RHOC', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'RPS27A', 'SEMA4D', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SRC', 'STAT1', 'STAT3', 'STUB1', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TGFA', 'TP53', 'UBA52', 'UBB', 'UBC', 'VEGFA', 'YES1', 'YY1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 0.3601383647145049 Spearman Correlation: 0.39126461671714846 Coefficient of Determination: 0.1292531059328722 RMSE: 0.9156278756406573 NRMSE: 0.15599227824942627 MAPE: 867.800571658618 Pearson Correlation: 0.30002625102005975 Spearman Correlation: 0.35567038918087546 Coefficient of Determination: 0.08969613970105239 RMSE: 1.0175852550834845 NRMSE: 0.18356036782659005 MAPE: 197.43678538936032 Predictor: ElasticNet Pearson Correlation: 0.33364110077854237 Spearman Correlation: 0.3761611953866227 Coefficient of Determination: 0.10722321439574622 RMSE: 0.9271382175475414 NRMSE: 0.15795325443336822 MAPE: 847.8423311714236 Pearson Correlation: 0.3140118866148893 Spearman Correlation: 0.3462137398368616 Coefficient of Determination: 0.09302786759701964 RMSE: 1.0157213582168583 NRMSE: 0.18322414283441416 MAPE: 194.22237731568052 Predictor: RandomForests Pearson Correlation: 0.3300151979666549 Spearman Correlation: 0.3879628797287709 Coefficient of Determination: 0.10801240043118054 RMSE: 0.9267283467299268 NRMSE: 0.15788342619383047 MAPE: 828.309119391773 Pearson Correlation: 0.2947854227524148 Spearman Correlation: 0.3472652622693181 Coefficient of Determination: 0.08527846501548242 RMSE: 1.0200514205323241 NRMSE: 0.1840052349614554 MAPE: 219.4346893325478 Protein: ERBB3 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AKT2', 'ANGPT1', 'ANGPT2', 'AREG', 'AR', 'BDNF', 'BMP4', 'BTC', 'CBLB', 'CBL', 'CCND1', 'CDH1', 'CSF1', 'CSK', 'CTNNB1', 'DCN', 'DOCK7', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FGF10', 'FGF19', 'FGF1', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FIGF', 'FLNA', 'FOXO3', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IGF1', 'IGF2', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'JAK1', 'JAK2', 'KITLG', 'KRAS', 'LAMA1', 'LAMB1', 'LAMC2', 'MAP2K1', 'MAPK8', 'MET', 'MUC4', 'NGF', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NTF3', 'PA2G4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PRKACA', 'PTEN', 'PTPN11', 'RNF41', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SOX10', 'SRC', 'TGFA', 'VEGFA', 'VEGFB', 'VEGFC', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.4326667010837529 Spearman Correlation: 0.4087055767343149 Coefficient of Determination: 0.18712909190220772 RMSE: 0.4066226410135739 NRMSE: 0.14744082970320352 MAPE: 229.204323105416 Pearson Correlation: 0.13370433045857338 Spearman Correlation: 0.1557306015260532 Coefficient of Determination: -0.07532214115783264 RMSE: 0.5130152803104169 NRMSE: 0.1426330104428767 MAPE: 166.8563566719122 Predictor: ElasticNet Pearson Correlation: 0.37321272492214186 Spearman Correlation: 0.38118389548612536 Coefficient of Determination: 0.1282083912807015 RMSE: 0.42110181045293393 NRMSE: 0.15269095731594814 MAPE: 222.76051425113943 Pearson Correlation: 0.10213340914365876 Spearman Correlation: 0.12404904512863513 Coefficient of Determination: -0.031178118089852047 RMSE: 0.5023748055710635 NRMSE: 0.13967465227526615 MAPE: 145.11545633939966 Predictor: RandomForests Pearson Correlation: 0.3570155193254938 Spearman Correlation: 0.37969036073279366 Coefficient of Determination: 0.11881503796260773 RMSE: 0.42336436953926265 NRMSE: 0.15351135823634277 MAPE: 230.32359484336033 Pearson Correlation: 0.008028181365802762 Spearman Correlation: 0.0900747672751626 Coefficient of Determination: -0.06350415461447656 RMSE: 0.5101884261719227 NRMSE: 0.14184706364688196 MAPE: 147.9234755475417 Fold: 4 Protein: RB1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AATF', 'ABL1', 'AKT1', 'AR', 'ASF1A', 'ATF2', 'BGLAP', 'CASP3', 'CBX4', 'CCNA1', 'CCNA2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CEBPA', 'COL1A1', 'CREBBP', 'CTBP1', 'DNMT1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'ELF1', 'EP300', 'FOXM1', 'FZR1', 'GNB2L1', 'H1F0', 'H2AFV', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HIST1H2BA', 'HIST2H2AC', 'HIST2H2BE', 'HMGA1', 'HMGA2', 'HSP90AA1', 'ID2', 'JUN', 'MAPK14', 'MAPK1', 'MAPK3', 'MDM2', 'MEF2C', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NFYC', 'PCNA', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP2CA', 'PPP2CB', 'PRIM1', 'PRIM2', 'RAF1', 'RBBP4', 'RUNX2', 'SIRT1', 'SKP2', 'SMARCA2', 'SMC2', 'SMC4', 'SP100', 'SP1', 'SP3', 'SPI1', 'SUV39H1', 'TAF1', 'TBP', 'TERT', 'TFDP1', 'TP53BP1', 'TP53', 'TP73', 'YAP1', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.20483440961027524 Spearman Correlation: 0.1812216444780812 Coefficient of Determination: 0.041957117714820025 RMSE: 0.24617796614580859 NRMSE: 0.09002997591640162 MAPE: 203.5364548837512 Pearson Correlation: -0.13400128137416645 Spearman Correlation: 0.10505623535390206 Coefficient of Determination: -2.8494048579776067e+17 RMSE: 88013896.16464102 NRMSE: 84327114.70953993 MAPE: 2455938049.2103424 Predictor: ElasticNet Pearson Correlation: 0.1582087840289768 Spearman Correlation: 0.1512004418294404 Coefficient of Determination: 0.016103826804699573 RMSE: 0.24947747550460747 NRMSE: 0.09123664259238132 MAPE: 129.435516809792 Pearson Correlation: 0.02676974885759192 Spearman Correlation: 0.04518572457251683 Coefficient of Determination: -0.08283342757252332 RMSE: 0.1715753895048584 NRMSE: 0.1643883316453248 MAPE: 99.33993495156153 Predictor: RandomForests Pearson Correlation: 0.2162222366170025 Spearman Correlation: 0.1987418315851939 Coefficient of Determination: 0.03887400808773622 RMSE: 0.24657376471408188 NRMSE: 0.09017472378367536 MAPE: 154.4084967450861 Pearson Correlation: 0.08837883115156757 Spearman Correlation: 0.08780702037946782 Coefficient of Determination: -0.09147466253611669 RMSE: 0.17225863267536445 NRMSE: 0.165042954696053 MAPE: 102.06718939748404 Protein: CDH1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ACTA1', 'ACTN1', 'ADAM10', 'ADAM15', 'CA2', 'CASP3', 'CBLL1', 'CDC42', 'CDH17', 'CDH3', 'CDH5', 'CTBP1', 'CTNNA1', 'CTNNB1', 'CTNND1', 'CTTN', 'DLG1', 'EFNA1', 'EGFR', 'EGF', 'ENAH', 'EPCAM', 'EPHA2', 'EXOC3', 'EXOC4', 'FER', 'FLOT1', 'FLOT2', 'FMN1', 'FYN', 'GDNF', 'GNA12', 'GNA13', 'HGF', 'HGS', 'IGF1R', 'IGF1', 'IGF2', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'ITGA6', 'ITGAE', 'ITGB4', 'ITGB7', 'AJUBA', 'JUP', 'KIFC3', 'KLK7', 'KLRG1', 'LAMB1', 'LAMC2', 'LIMA1', 'MAPK1', 'MAPK3', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MLLT4', 'MMP3', 'MMP7', 'MMP9', 'MYO6', 'NCSTN', 'NUMB', 'PARD6A', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PLEKHA7', 'PLG', 'PRKCI', 'PRKCZ', 'PSEN1', 'PVRL1', 'PVRL2', 'RAB5A', 'RAB7A', 'RAC1', 'RAP1A', 'RET', 'RHOA', 'SKIL', 'SMAD3', 'SMAD4', 'SNAI1', 'SNAI2', 'SNAI3', 'SRC', 'STX4', 'TJP1', 'TWIST1', 'VASP', 'VCL', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 0.5775081518927683 Spearman Correlation: 0.4705902568831062 Coefficient of Determination: 0.3335156602405419 RMSE: 0.9135439551697335 NRMSE: 0.14546415005409596 MAPE: 267.8805267849349 Pearson Correlation: -0.06709775203615702 Spearman Correlation: 0.32575192816933496 Coefficient of Determination: -5251804296491653.0 RMSE: 84531645.52768047 NRMSE: 15335373.449381458 MAPE: 3715384734.602257 Predictor: ElasticNet Pearson Correlation: 0.5536210091498978 Spearman Correlation: 0.450733843173827 Coefficient of Determination: 0.25790036115658077 RMSE: 0.9639745844437282 NRMSE: 0.15349424929838668 MAPE: 325.2765898012341 Pearson Correlation: 0.5841715253252115 Spearman Correlation: 0.36665999814428246 Coefficient of Determination: 0.19829412101524369 RMSE: 1.0444137728641651 NRMSE: 0.1894731274017933 MAPE: 303.98934691172843 Predictor: RandomForests Pearson Correlation: 0.5582503609916558 Spearman Correlation: 0.4679407484152689 Coefficient of Determination: 0.31149126604025557 RMSE: 0.9285155909648567 NRMSE: 0.14784809257107362 MAPE: 241.25077222067551 Pearson Correlation: 0.602697709255142 Spearman Correlation: 0.36530581615245317 Coefficient of Determination: 0.30490509255946563 RMSE: 0.9724944007126225 NRMSE: 0.17642581922147646 MAPE: 219.52759564218192 Protein: CDH2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ADAM10', 'AFP', 'AHSG', 'ALB', 'APLP2', 'APOA1', 'APOB', 'APOE', 'APP', 'AXIN1', 'BDNF', 'BMP4', 'BNIP2', 'CALU', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH17', 'CDH18', 'CDH1', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDON', 'CREBBP', 'CSF1', 'CST3', 'CTNNA1', 'CTNNA2', 'CTNNB1', 'CTNND1', 'CYR61', 'FAM20C', 'FBN1', 'FER', 'FGFR1', 'FN1', 'FSTL1', 'GAS6', 'GJA1', 'GOLM1', 'GPC3', 'GRIA2', 'HSP90B1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL6', 'ITIH2', 'JUP', 'KIF5B', 'KNG1', 'KTN1', 'LAMB1', 'LAMC1', 'LGALS1', 'LRP5', 'LTBP1', 'MAP2K6', 'MAPK11', 'MAPK14', 'MATN3', 'MEF2A', 'MEF2C', 'MEF2D', 'MET', 'MFGE8', 'MSLN', 'NTRK2', 'P4HB', 'PCSK9', 'PIK3CA', 'PIK3R1', 'PTPN11', 'PTPN1', 'RAC1', 'RHOA', 'ROBO1', 'SCG2', 'SDC2', 'SERPINA1', 'SLIT1', 'SNAI1', 'SNAI2', 'SPAG9', 'SPARCL1', 'SPP1', 'STC2', 'TCF3', 'TIMP1', 'TMEM132A', 'TNC', 'VCAN', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.3153647959603017 Spearman Correlation: 0.3092981547826978 Coefficient of Determination: 0.09939488342301395 RMSE: 0.3600168176975495 NRMSE: 0.13045032889975705 MAPE: 1268.233009789632 Pearson Correlation: -0.07365284393920575 Spearman Correlation: 0.11183615773157618 Coefficient of Determination: -6.219263535666392e+20 RMSE: 8311163650.342282 NRMSE: 4287464224.72364 MAPE: 223077578647.42273 Predictor: ElasticNet Pearson Correlation: 0.2540930439071454 Spearman Correlation: 0.2678047762951793 Coefficient of Determination: 0.05469349089776476 RMSE: 0.36884330759497985 NRMSE: 0.13364856424196678 MAPE: 1002.0345033890187 Pearson Correlation: 0.2277516972005732 Spearman Correlation: 0.26162348092940957 Coefficient of Determination: 0.005242650493854861 RMSE: 0.3323922827371626 NRMSE: 0.17147057629542867 MAPE: 178.5616808042629 Predictor: RandomForests Pearson Correlation: 0.32960461444197503 Spearman Correlation: 0.32304952917237506 Coefficient of Determination: 0.09561375557196528 RMSE: 0.3607717788807611 NRMSE: 0.13072388538327456 MAPE: 1060.0399473920893 Pearson Correlation: 0.18521001003652574 Spearman Correlation: 0.18569305420890017 Coefficient of Determination: 0.001537844660796761 RMSE: 0.33301067697062336 NRMSE: 0.17178958615545342 MAPE: 198.3997784848878 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.40162383115089545 Spearman Correlation: 0.3862197220614044 Coefficient of Determination: 0.16106262501463042 RMSE: 0.18860029586078106 NRMSE: 0.13441302782386721 MAPE: 378.1537845626586 Pearson Correlation: 0.20990469369845347 Spearman Correlation: 0.16926121113548007 Coefficient of Determination: -0.06864543438998805 RMSE: 0.21480995615360537 NRMSE: 0.19119030577781418 MAPE: 618.8474203264233 Predictor: ElasticNet Pearson Correlation: 0.2967195523686797 Spearman Correlation: 0.31940040179779977 Coefficient of Determination: 0.055470703732111826 RMSE: 0.20011761334104144 NRMSE: 0.14262127324503715 MAPE: 140.32924088677132 Pearson Correlation: 0.24677542017830048 Spearman Correlation: 0.20281830738292306 Coefficient of Determination: -0.049817157550336555 RMSE: 0.21290919715539997 NRMSE: 0.18949854669651275 MAPE: 219.2407458187418 Predictor: RandomForests Pearson Correlation: 0.33302890450616124 Spearman Correlation: 0.3378769699810783 Coefficient of Determination: 0.10454953363537889 RMSE: 0.1948490899615274 NRMSE: 0.13886646376094144 MAPE: 219.9639349028977 Pearson Correlation: 0.2371807284359152 Spearman Correlation: 0.17721400745014462 Coefficient of Determination: -0.03196862961188662 RMSE: 0.2110915442050975 NRMSE: 0.18788075565186593 MAPE: 337.3705822341323 Protein: PTEN Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AR', 'BCR', 'CD79A', 'CD79B', 'CDIPT', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'DLG1', 'EGFR', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'FOXO3', 'FOXO4', 'FRK', 'GRB2', 'HRAS', 'INPP4A', 'INPP4B', 'INPP5B', 'INPP5D', 'INPP5J', 'INPP5K', 'INPPL1', 'IPMK', 'IRS1', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'MAST2', 'MDM2', 'MDM4', 'MKRN1', 'MTOR', 'MYC', 'NEDD4', 'NOTCH1', 'OCRL', 'OTUD3', 'PARK7', 'PDGFB', 'PDGFRB', 'PI4K2A', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIKFYVE', 'PIP4K2A', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PML', 'PREX2', 'PSMA6', 'PSMA7', 'PSMB9', 'PSMC6', 'PSMD10', 'PSMD5', 'PSME3', 'PTK2', 'RICTOR', 'RNF146', 'ROCK1', 'ROCK2', 'RPS27A', 'RPS6KB1', 'SACM1L', 'SHC1', 'SLC9A3R1', 'SLC9A3R2', 'SOS1', 'STK11', 'STUB1', 'SYNJ1', 'SYNJ2', 'TNKS2', 'TNKS', 'TNRC6A', 'TNRC6B', 'TP53', 'UBB', 'UBC', 'USP13', 'USP7', 'WWP2', 'XIAP', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 0.25317194340112675 Spearman Correlation: 0.26149592650472187 Coefficient of Determination: 0.0640957409916455 RMSE: 0.5434792705836397 NRMSE: 0.1051298496176957 MAPE: 320.88972746706787 Pearson Correlation: 0.2945216185061042 Spearman Correlation: 0.20560140663229715 Coefficient of Determination: 0.06561985459619513 RMSE: 0.7206941961409576 NRMSE: 0.11268770168727349 MAPE: 819.5444524301246 Predictor: ElasticNet Pearson Correlation: 0.17685149825437554 Spearman Correlation: 0.18593585648196978 Coefficient of Determination: 0.025070671659004673 RMSE: 0.5546944744114155 NRMSE: 0.10729930254012215 MAPE: 283.9022610289809 Pearson Correlation: 0.16818272157018188 Spearman Correlation: 0.1252350415252149 Coefficient of Determination: 0.016733965923944716 RMSE: 0.7393068709191746 NRMSE: 0.11559797840969034 MAPE: 595.818291114943 Predictor: RandomForests Pearson Correlation: 0.28590034500505684 Spearman Correlation: 0.26359004903834443 Coefficient of Determination: 0.05702183515123116 RMSE: 0.5455293114404328 NRMSE: 0.1055264065769949 MAPE: 294.4383535041882 Pearson Correlation: 0.24436245091994904 Spearman Correlation: 0.18450652605943738 Coefficient of Determination: 0.030901620485711323 RMSE: 0.733961293761153 NRMSE: 0.11476214428287906 MAPE: 585.5999279492232 Protein: BRCA2 Protein Interaction Partners Count: 100 x_train_column_count: 99 x_train columns: ['ATM', 'ATRIP', 'ATR', 'BARD1', 'BLM', 'BRCA1', 'BRIP1', 'SLX4', 'RHNO1', 'RMI2', 'CDK2', 'CDK4', 'CHEK1', 'CHEK2', 'DMC1', 'DNA2', 'EME1', 'EME2', 'EXO1', 'FANCD2', 'FANCE', 'FANCG', 'FANCI', 'GEN1', 'H2AFX', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HUS1', 'KAT5', 'SPIDR', 'MLH1', 'MLH3', 'MND1', 'MRE11A', 'MSH4', 'MSH5', 'MUS81', 'NBN', 'PALB2', 'PARP1', 'PCNA', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'PSMC3IP', 'RAD17', 'RAD1', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD9A', 'RAD9B', 'RBBP8', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SPO11', 'SYCP3', 'TEX15', 'TOP3A', 'TOPBP1', 'TP53', 'UBA52', 'UBB', 'UBC', 'WRN', 'XRCC2', 'XRCC3', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.21987494051266807 Spearman Correlation: 0.19861874985109132 Coefficient of Determination: 0.048327317689492166 RMSE: 0.18710535480791785 NRMSE: 0.12053815738954284 MAPE: 159.19903579439367 Pearson Correlation: 0.009531016788229195 Spearman Correlation: 0.10414162532958389 Coefficient of Determination: -4.037881774181629e+18 RMSE: 418180997.61546755 NRMSE: 406273132.11322886 MAPE: 240003561124.12973 Predictor: ElasticNet Pearson Correlation: 0.11748237511068664 Spearman Correlation: 0.11842874485156377 Coefficient of Determination: 0.004308524190383856 RMSE: 0.19138363978440395 NRMSE: 0.1232943403346136 MAPE: 109.48713081427721 Pearson Correlation: 0.056908410595781826 Spearman Correlation: 0.07276400023336407 Coefficient of Determination: 0.0017451136614414775 RMSE: 0.20792572151129252 NRMSE: 0.20200495624378711 MAPE: 131.06820791183233 Predictor: RandomForests Pearson Correlation: 0.22237677251325963 Spearman Correlation: 0.1976280714216311 Coefficient of Determination: 0.03561257114456262 RMSE: 0.18835111070168842 NRMSE: 0.12134070587965111 MAPE: 130.3834496106843 Pearson Correlation: 0.057563006062851155 Spearman Correlation: 0.07506021489562975 Coefficient of Determination: 0.0015702317468250238 RMSE: 0.20794393372159578 NRMSE: 0.20202264985436438 MAPE: 105.41568972722042 Protein: CDKN2A Protein Interaction Partners Count: 100 x_train_column_count: 100 x_train columns: ['ABL1', 'AKT1', 'ARF1', 'BMI1', 'BRCA1', 'CBX7', 'CCND1', 'CCND2', 'CCND3', 'CCNL1', 'CDC45', 'CDC6', 'CDC7', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPB', 'CTCF', 'DAXX', 'E2F1', 'E2F2', 'E2F3', 'EGFR', 'EGR1', 'AGO1', 'AGO3', 'AGO4', 'ERBB2', 'EZH2', 'FOXM1', 'GMNN', 'HDAC1', 'HIF1A', 'HRAS', 'HUWE1', 'IL6', 'KRAS', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAX', 'MCM10', 'MCM2', 'MCM5', 'MDM2', 'MDM4', 'MGMT', 'MLH1', 'MOV10', 'MRAS', 'MTAP', 'MYCN', 'MYC', 'NPM1', 'NRAS', 'ORC5', 'PIK3CA', 'PIK3R1', 'PTEN', 'RASSF1', 'RB1', 'RPS27A', 'RRAS2', 'RRAS', 'RUNX3', 'SMAD3', 'SMAD4', 'SMARCA4', 'SUMO1', 'SUMO2', 'SUMO3', 'TBX2', 'TERT', 'TFDP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TP53', 'TP63', 'TRIP12', 'TWIST1', 'UBA52', 'UBB', 'UBC', 'UBE2I', 'USP7', 'VEGFA', 'WRN', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.23666369466043344 Spearman Correlation: 0.17398719824926295 Coefficient of Determination: 0.05600970076634282 RMSE: 0.6548090561592183 NRMSE: 0.14802962725425978 MAPE: 281.25578949478677 Pearson Correlation: -0.1641248538731466 Spearman Correlation: 0.01904917094228275 Coefficient of Determination: -1.3810864018216272e+16 RMSE: 74116738.6396074 NRMSE: 22331045.08575095 MAPE: 3222259932.732165 Predictor: ElasticNet Pearson Correlation: 0.12190200707744941 Spearman Correlation: 0.11346178645283987 Coefficient of Determination: 0.01242621848266312 RMSE: 0.6697545725266154 NRMSE: 0.15140829038693687 MAPE: 277.045166155951 Pearson Correlation: 0.0766512573280193 Spearman Correlation: 0.0016135608290345535 Coefficient of Determination: 0.0033491260412428225 RMSE: 0.6296183866171112 NRMSE: 0.1897012312796358 MAPE: 199.2382970476393 Predictor: RandomForests Pearson Correlation: 0.23267625243144618 Spearman Correlation: 0.16422007972390792 Coefficient of Determination: 0.04207909723002756 RMSE: 0.6596229182064619 NRMSE: 0.14911787458041412 MAPE: 277.4005214038115 Pearson Correlation: 0.15892258194669842 Spearman Correlation: 0.05409878763959861 Coefficient of Determination: 0.018092070829851314 RMSE: 0.6249442257979368 NRMSE: 0.18829292732688668 MAPE: 200.45590274837025 Protein: TP53 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AKT1', 'APAF1', 'ATM', 'ATR', 'AURKA', 'AURKB', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2L1', 'BCL2', 'BCL6', 'BRCA1', 'CASP8', 'CCNA2', 'CCNE1', 'CCNG1', 'CDC25C', 'CDK2', 'CDK5', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CHEK1', 'CHEK2', 'COPS5', 'CREBBP', 'DDB2', 'DDX5', 'DYRK2', 'E2F4', 'EGR1', 'EHMT2', 'EP300', 'EZH2', 'FZR1', 'GADD45A', 'GLS2', 'GSK3B', 'HDAC1', 'HDAC2', 'HIF1A', 'HIPK2', 'HSP90AA1', 'HSPA1A', 'IGFBP3', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'MAPK14', 'MAPK1', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MCL1', 'MDM2', 'MDM4', 'MSH2', 'NGFR', 'NPM1', 'PLK3', 'PMAIP1', 'PPP1R13B', 'PPP1R13L', 'PRKDC', 'PRMT5', 'PTEN', 'RB1', 'RCHY1', 'DROSHA', 'RPA1', 'RRM2B', 'SETD7', 'SETD8', 'SFN', 'SIRT1', 'SMYD2', 'SNAI1', 'SNAI2', 'SP1', 'STAT3', 'STK11', 'SUMO1', 'SUMO2', 'TBP', 'TNFRSF10A', 'TNFRSF10B', 'TP53BP1', 'TP53BP2', 'TP53INP1', 'TP53RK', 'TXN', 'UBE2I', 'USP7', 'WRN', 'XRCC6', 'YY1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 0.38459978821740237 Spearman Correlation: 0.41090268223936066 Coefficient of Determination: 0.14791697217245314 RMSE: 0.4154975422075991 NRMSE: 0.09985521321980273 MAPE: 803.0812563445512 Pearson Correlation: -0.07688736714445066 Spearman Correlation: 0.3234990422727255 Coefficient of Determination: -5.720884710950002e+16 RMSE: 103282480.40696847 NRMSE: 32775603.074057017 MAPE: 1774900754.6805353 Predictor: ElasticNet Pearson Correlation: 0.37212723808014636 Spearman Correlation: 0.40610025287162343 Coefficient of Determination: 0.12060243141002636 RMSE: 0.42210464560725647 NRMSE: 0.10144307753118398 MAPE: 642.0026964970756 Pearson Correlation: 0.3516525447731308 Spearman Correlation: 0.3560864588634187 Coefficient of Determination: 0.11124409632475407 RMSE: 0.40708613476548383 NRMSE: 0.129184480440938 MAPE: 176.18094086444233 Predictor: RandomForests Pearson Correlation: 0.38029235027014274 Spearman Correlation: 0.40666456438629495 Coefficient of Determination: 0.14436111496105897 RMSE: 0.416363603197002 NRMSE: 0.10006335092453786 MAPE: 813.882765192432 Pearson Correlation: 0.38032094857470655 Spearman Correlation: 0.3451354012189664 Coefficient of Determination: 0.1404086655562904 RMSE: 0.40035114575508773 NRMSE: 0.1270472028925767 MAPE: 249.1445188182491 Protein: CTNNB1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'AKT1', 'APC2', 'APC', 'AR', 'AXIN1', 'AXIN2', 'BCL9', 'BTRC', 'CASP3', 'CBY1', 'CCND1', 'CDC73', 'CDH11', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDH5', 'CDH8', 'CHD8', 'CREBBP', 'CSNK1A1', 'CSNK1E', 'CTBP1', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNBIP1', 'CTNND1', 'DVL1', 'DVL2', 'DVL3', 'EGFR', 'EGF', 'EP300', 'ERBB2', 'AMER1', 'FBXW11', 'FER', 'FGFR1', 'FOXO1', 'FOXO3', 'FYN', 'FZD1', 'FZD2', 'FZD5', 'GSK3A', 'GSK3B', 'HNF4A', 'IGF1R', 'IQGAP1', 'JUN', 'JUP', 'KDR', 'KLF4', 'LEF1', 'LRP5', 'LRP6', 'MAPK9', 'MEN1', 'MET', 'MMP7', 'MYC', 'NLK', 'NOTCH1', 'PIK3CA', 'PIK3R1', 'PITX2', 'PSEN1', 'PTPN11', 'PTPN1', 'PYGO2', 'RUVBL1', 'SKP1', 'SMAD4', 'SMAD7', 'SMARCA4', 'SOX17', 'SOX2', 'SOX6', 'SOX9', 'SRC', 'TBL1X', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TGFBR1', 'TGFBR2', 'TJP1', 'TLE1', 'VCL', 'VEGFA', 'WNT1', 'WNT3A', 'WNT8A', 'WNT8B', 'YWHAZ', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.27335587545558876 Spearman Correlation: 0.23605158318553254 Coefficient of Determination: 0.07472328793813399 RMSE: 0.6843307518450273 NRMSE: 0.16528131384528727 MAPE: 687.187425218367 Pearson Correlation: 0.1485494511817907 Spearman Correlation: 0.14336853894659113 Coefficient of Determination: -3.3847454215685443e+18 RMSE: 1476329487.8652592 NRMSE: 310388000.98083824 MAPE: 53027075585.15604 Predictor: ElasticNet Pearson Correlation: 0.14735549732248307 Spearman Correlation: 0.14518253371819176 Coefficient of Determination: 0.017300496986014102 RMSE: 0.7052459628325989 NRMSE: 0.17033280910844337 MAPE: 608.5420497090523 Pearson Correlation: 0.1917057714573668 Spearman Correlation: 0.16014508716209722 Coefficient of Determination: -0.12592310609401647 RMSE: 0.8514803999873937 NRMSE: 0.17901782860722262 MAPE: 822.321910830472 Predictor: RandomForests Pearson Correlation: 0.27106945397144416 Spearman Correlation: 0.2182186204104598 Coefficient of Determination: 0.04029509067695569 RMSE: 0.6969459500132288 NRMSE: 0.16832816877915874 MAPE: 624.4933607396619 Pearson Correlation: 0.12827938482857137 Spearman Correlation: 0.20425489601501975 Coefficient of Determination: -0.1354217036808698 RMSE: 0.8550645183565246 NRMSE: 0.17977136455229262 MAPE: 857.7793790833456 Protein: CCNE1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['ABL1', 'BARD1', 'BRCA1', 'CABLES1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNH', 'CCT2', 'CCT3', 'CCT4', 'CCT6A', 'CCT7', 'CDC25A', 'CDC6', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDT1', 'CKS1B', 'CKS2', 'CUL1', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'EP400', 'FOXM1', 'HDAC1', 'IFNAR1', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'MNAT1', 'MYC', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PCNA', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB7', 'PSMC1', 'PSMC2', 'PSMC4', 'PSMC5', 'PSMD10', 'PSMD11', 'PSMD14', 'PSMD1', 'PSMD3', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSME3', 'PTK6', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RHOA', 'RPS27A', 'RRN3', 'SKP1', 'SKP2', 'STAT5A', 'STAT5B', 'TCP1', 'TFDP1', 'TP53', 'TP73', 'UBB', 'UBC', 'WEE1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.3538466358279118 Spearman Correlation: 0.21851893905334271 Coefficient of Determination: 0.12520744148345508 RMSE: 0.47214525048363326 NRMSE: 0.11394291345503614 MAPE: 101.20555481696725 Pearson Correlation: 0.2607877126183485 Spearman Correlation: -0.005256126281608637 Coefficient of Determination: -1.5458542432019112e+16 RMSE: 56209702.54953709 NRMSE: 22937118.480999388 MAPE: 702473772.2118077 Predictor: ElasticNet Pearson Correlation: 0.2605976280986456 Spearman Correlation: 0.1992893268873785 Coefficient of Determination: 0.05727162382956241 RMSE: 0.490135743670236 NRMSE: 0.11828456299206892 MAPE: 102.17916908176832 Pearson Correlation: 0.15908054425353302 Spearman Correlation: 0.03314719753683165 Coefficient of Determination: 0.010869925128444535 RMSE: 0.44962838394488647 NRMSE: 0.18347685625760488 MAPE: 125.9328629138037 Predictor: RandomForests Pearson Correlation: 0.3371758559427012 Spearman Correlation: 0.21689642227748276 Coefficient of Determination: 0.11076662586753339 RMSE: 0.47602631592501177 NRMSE: 0.11487953180129154 MAPE: 101.66804150964721 Pearson Correlation: 0.16161624423507803 Spearman Correlation: 0.045939612714900054 Coefficient of Determination: -0.009109892575986933 RMSE: 0.4541467888486679 NRMSE: 0.18532065161538722 MAPE: 132.25995430131061 Protein: CCND1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ACTL6A', 'AKT1', 'ARID1A', 'ARID2', 'AR', 'ATF2', 'BRD2', 'BTG2', 'CCNA1', 'CCNB1', 'CCNE1', 'CCNH', 'CDC25A', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CKS1B', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUL1', 'DNMT3A', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'AGO2', 'EP300', 'ESR1', 'FOS', 'FOXA1', 'FOXM1', 'GADD45A', 'GATA3', 'GLI1', 'GLI3', 'GSK3B', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC4', 'HIST1H2BA', 'HIST2H2BE', 'HNF1A', 'IFNAR1', 'JAK2', 'JUN', 'KAT2B', 'LEF1', 'LYN', 'MAML1', 'MYB', 'MYC', 'NOTCH1', 'PBRM1', 'PCNA', 'PRMT5', 'PSMA6', 'PSMC6', 'PSMD10', 'PSMD6', 'PSMD7', 'PSME3', 'PTK6', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RELA', 'RUNX1', 'RUNX3', 'SKP1', 'SKP2', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'SUV39H1', 'TCF7L2', 'TFDP1', 'TP53', 'WDR77', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 0.2125927488824245 Spearman Correlation: 0.13624719678576216 Coefficient of Determination: 0.04519567685626136 RMSE: 0.2348139482361273 NRMSE: 0.15001977245123835 MAPE: 621.9651329635941 Pearson Correlation: -0.18325922907776482 Spearman Correlation: 0.04279488113577297 Coefficient of Determination: -759315862860799.2 RMSE: 6310303.236651712 NRMSE: 3979757.3389579416 MAPE: 166808089.6334092 Predictor: ElasticNet Pearson Correlation: 0.09663093456625164 Spearman Correlation: 0.1225158835163517 Coefficient of Determination: 0.00047999962644917904 RMSE: 0.24024947482003145 NRMSE: 0.1534924642031353 MAPE: 629.6564148108301 Pearson Correlation: 0.03321210908850131 Spearman Correlation: 0.01864169927497119 Coefficient of Determination: -0.0011761098622884436 RMSE: 0.2291364772553094 NRMSE: 0.14451089635173398 MAPE: 484.66152320015345 Predictor: RandomForests Pearson Correlation: 0.21269441490093732 Spearman Correlation: 0.15008558345619696 Coefficient of Determination: 0.030727619194154343 RMSE: 0.23658631588669535 NRMSE: 0.1511521165629722 MAPE: 637.8815456465596 Pearson Correlation: 0.04760071954391032 Spearman Correlation: 0.08889416306743822 Coefficient of Determination: 5.738796019894021e-05 RMSE: 0.2289952800907953 NRMSE: 0.14442184667683863 MAPE: 496.722974058573 Protein: ERBB2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ADAM17', 'ADRB2', 'AREG', 'ARHGEF11', 'ARHGEF12', 'BTC', 'CBL', 'CCND1', 'CD44', 'CDC37', 'CDH1', 'CTNNB1', 'CTNND1', 'CUL5', 'DIAPH1', 'DOCK7', 'EGFR', 'EGF', 'ERBB2IP', 'ERBB3', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FYN', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IL6R', 'IL6', 'INS', 'JAK1', 'JAK2', 'KRAS', 'LRPPRC', 'MAP2K1', 'MAPK8', 'MATK', 'MEMO1', 'MUC1', 'MUC4', 'MYC', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'PGAP3', 'PGR', 'PIK3CA', 'PIK3CB', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PLXNB1', 'PRKACA', 'PTEN', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'RHOA', 'RHOB', 'RHOC', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'RPS27A', 'SEMA4D', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SRC', 'STAT1', 'STAT3', 'STUB1', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TGFA', 'TP53', 'UBA52', 'UBB', 'UBC', 'VEGFA', 'YES1', 'YY1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 0.3626150792869469 Spearman Correlation: 0.3941871478838915 Coefficient of Determination: 0.13147551383661926 RMSE: 0.9140765083761824 NRMSE: 0.15572797730313004 MAPE: 741.1548288540478 Pearson Correlation: 0.29780188763249826 Spearman Correlation: 0.31191774478147594 Coefficient of Determination: 0.026158788258986654 RMSE: 1.023017227472833 NRMSE: 0.18421457620067583 MAPE: 283.19277503517964 Predictor: ElasticNet Pearson Correlation: 0.3391558736376854 Spearman Correlation: 0.3802325674681927 Coefficient of Determination: 0.11068843535834649 RMSE: 0.9249504846353312 NRMSE: 0.15758053812551429 MAPE: 719.4455259271334 Pearson Correlation: 0.29925007940493314 Spearman Correlation: 0.3613339447202031 Coefficient of Determination: 0.032126489502467215 RMSE: 1.0198778846149796 NRMSE: 0.18364927514945434 MAPE: 229.34301985905785 Predictor: RandomForests Pearson Correlation: 0.3318812716424228 Spearman Correlation: 0.3942960830258924 Coefficient of Determination: 0.10672066654902868 RMSE: 0.9270115762774479 NRMSE: 0.15793167900871388 MAPE: 693.2435376193918 Pearson Correlation: 0.33757761910506207 Spearman Correlation: 0.3551538895599291 Coefficient of Determination: 0.054205859871438555 RMSE: 1.0081779205320125 NRMSE: 0.18154246417186093 MAPE: 281.72679029691227 Protein: ERBB3 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AKT2', 'ANGPT1', 'ANGPT2', 'AREG', 'AR', 'BDNF', 'BMP4', 'BTC', 'CBLB', 'CBL', 'CCND1', 'CDH1', 'CSF1', 'CSK', 'CTNNB1', 'DCN', 'DOCK7', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FGF10', 'FGF19', 'FGF1', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FIGF', 'FLNA', 'FOXO3', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IGF1', 'IGF2', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'JAK1', 'JAK2', 'KITLG', 'KRAS', 'LAMA1', 'LAMB1', 'LAMC2', 'MAP2K1', 'MAPK8', 'MET', 'MUC4', 'NGF', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NTF3', 'PA2G4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PRKACA', 'PTEN', 'PTPN11', 'RNF41', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SOX10', 'SRC', 'TGFA', 'VEGFA', 'VEGFB', 'VEGFC', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.4145670744514375 Spearman Correlation: 0.40318755145428586 Coefficient of Determination: 0.17119600417160974 RMSE: 0.4349061636549977 NRMSE: 0.11891812119550739 MAPE: 215.45375452000394 Pearson Correlation: -0.10707831303797759 Spearman Correlation: 0.03324137159338279 Coefficient of Determination: -1.0510594752038455e+21 RMSE: 12468128366.272806 NRMSE: 6136886584.077535 MAPE: 401058326990.021 Predictor: ElasticNet Pearson Correlation: 0.3414664294144997 Spearman Correlation: 0.35235477540739796 Coefficient of Determination: 0.10552484454061328 RMSE: 0.4518078639109188 NRMSE: 0.12353962028522412 MAPE: 222.92926428663705 Pearson Correlation: 0.24280038330165882 Spearman Correlation: 0.20992358805257322 Coefficient of Determination: 0.05094552032456234 RMSE: 0.3746564302421176 NRMSE: 0.18440811265713308 MAPE: 190.66590622119665 Predictor: RandomForests Pearson Correlation: 0.3812284419055303 Spearman Correlation: 0.378500427770292 Coefficient of Determination: 0.11084542590708524 RMSE: 0.45046212172213007 NRMSE: 0.12317164864886158 MAPE: 218.73169490925412 Pearson Correlation: 0.16010062437725753 Spearman Correlation: 0.1269322706538874 Coefficient of Determination: 0.016380257864933467 RMSE: 0.3814180464982748 NRMSE: 0.18773622020223502 MAPE: 198.79304345521277 Fold: 5 Protein: RB1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AATF', 'ABL1', 'AKT1', 'AR', 'ASF1A', 'ATF2', 'BGLAP', 'CASP3', 'CBX4', 'CCNA1', 'CCNA2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CEBPA', 'COL1A1', 'CREBBP', 'CTBP1', 'DNMT1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'ELF1', 'EP300', 'FOXM1', 'FZR1', 'GNB2L1', 'H1F0', 'H2AFV', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HIST1H2BA', 'HIST2H2AC', 'HIST2H2BE', 'HMGA1', 'HMGA2', 'HSP90AA1', 'ID2', 'JUN', 'MAPK14', 'MAPK1', 'MAPK3', 'MDM2', 'MEF2C', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NFYC', 'PCNA', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP2CA', 'PPP2CB', 'PRIM1', 'PRIM2', 'RAF1', 'RBBP4', 'RUNX2', 'SIRT1', 'SKP2', 'SMARCA2', 'SMC2', 'SMC4', 'SP100', 'SP1', 'SP3', 'SPI1', 'SUV39H1', 'TAF1', 'TBP', 'TERT', 'TFDP1', 'TP53BP1', 'TP53', 'TP73', 'YAP1', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.223696347808029 Spearman Correlation: 0.2025801952549389 Coefficient of Determination: 0.05004005237321829 RMSE: 0.22797764927242228 NRMSE: 0.11262438026924917 MAPE: 169.9620099888281 Pearson Correlation: 0.08407608089491075 Spearman Correlation: 0.024116718471653687 Coefficient of Determination: -4.816439546434635e+16 RMSE: 52752426.689694345 NRMSE: 26598041.006844252 MAPE: 10650113625.448313 Predictor: ElasticNet Pearson Correlation: 0.16399146408424067 Spearman Correlation: 0.16208090428353375 Coefficient of Determination: 0.011604258769578601 RMSE: 0.2325439561023604 NRMSE: 0.11488020437517495 MAPE: 110.29252409455546 Pearson Correlation: 0.014672114944480725 Spearman Correlation: 0.08494015667953544 Coefficient of Determination: -0.11180671693167143 RMSE: 0.2534510136958543 NRMSE: 0.12779128617462351 MAPE: 157.85594329430188 Predictor: RandomForests Pearson Correlation: 0.2365962032511066 Spearman Correlation: 0.20108530028768018 Coefficient of Determination: 0.04368850692577597 RMSE: 0.22873852243833387 NRMSE: 0.11300026303252785 MAPE: 127.31676208609535 Pearson Correlation: 0.024312089087317763 Spearman Correlation: 0.07294151487680137 Coefficient of Determination: -0.11355671917013632 RMSE: 0.2536504033186246 NRMSE: 0.12789181943338673 MAPE: 286.86632143284663 Protein: CDH1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ACTA1', 'ACTN1', 'ADAM10', 'ADAM15', 'CA2', 'CASP3', 'CBLL1', 'CDC42', 'CDH17', 'CDH3', 'CDH5', 'CTBP1', 'CTNNA1', 'CTNNB1', 'CTNND1', 'CTTN', 'DLG1', 'EFNA1', 'EGFR', 'EGF', 'ENAH', 'EPCAM', 'EPHA2', 'EXOC3', 'EXOC4', 'FER', 'FLOT1', 'FLOT2', 'FMN1', 'FYN', 'GDNF', 'GNA12', 'GNA13', 'HGF', 'HGS', 'IGF1R', 'IGF1', 'IGF2', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'ITGA6', 'ITGAE', 'ITGB4', 'ITGB7', 'AJUBA', 'JUP', 'KIFC3', 'KLK7', 'KLRG1', 'LAMB1', 'LAMC2', 'LIMA1', 'MAPK1', 'MAPK3', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MLLT4', 'MMP3', 'MMP7', 'MMP9', 'MYO6', 'NCSTN', 'NUMB', 'PARD6A', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PLEKHA7', 'PLG', 'PRKCI', 'PRKCZ', 'PSEN1', 'PVRL1', 'PVRL2', 'RAB5A', 'RAB7A', 'RAC1', 'RAP1A', 'RET', 'RHOA', 'SKIL', 'SMAD3', 'SMAD4', 'SNAI1', 'SNAI2', 'SNAI3', 'SRC', 'STX4', 'TJP1', 'TWIST1', 'VASP', 'VCL', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.624305602713152 Spearman Correlation: 0.4895108211086963 Coefficient of Determination: 0.3897574815803744 RMSE: 0.8796657780755166 NRMSE: 0.14006970766464708 MAPE: 193.22816786670634 Pearson Correlation: 0.4208429797962319 Spearman Correlation: 0.33596620264670096 Coefficient of Determination: 0.14141079121914923 RMSE: 1.0764765286210858 NRMSE: 0.21169230273172324 MAPE: 584.0616146659747 Predictor: ElasticNet Pearson Correlation: 0.6016485980390301 Spearman Correlation: 0.46776047108429114 Coefficient of Determination: 0.3000512055059881 RMSE: 0.9421056316917982 NRMSE: 0.150012042879494 MAPE: 211.0740080577393 Pearson Correlation: 0.41344553091921404 Spearman Correlation: 0.3238662245146106 Coefficient of Determination: 0.1504233507715479 RMSE: 1.0708117688870706 NRMSE: 0.21057831092546275 MAPE: 218.6494142209075 Predictor: RandomForests Pearson Correlation: 0.6154091358249777 Spearman Correlation: 0.47000328045022055 Coefficient of Determination: 0.3784294720573107 RMSE: 0.8877929091484676 NRMSE: 0.14136379560339918 MAPE: 165.64536002708005 Pearson Correlation: 0.4188807374100078 Spearman Correlation: 0.3530556573896902 Coefficient of Determination: 0.13632330007349314 RMSE: 1.0796610992976108 NRMSE: 0.21231855800232263 MAPE: 206.61368621958985 Protein: CDH2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ADAM10', 'AFP', 'AHSG', 'ALB', 'APLP2', 'APOA1', 'APOB', 'APOE', 'APP', 'AXIN1', 'BDNF', 'BMP4', 'BNIP2', 'CALU', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH17', 'CDH18', 'CDH1', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDON', 'CREBBP', 'CSF1', 'CST3', 'CTNNA1', 'CTNNA2', 'CTNNB1', 'CTNND1', 'CYR61', 'FAM20C', 'FBN1', 'FER', 'FGFR1', 'FN1', 'FSTL1', 'GAS6', 'GJA1', 'GOLM1', 'GPC3', 'GRIA2', 'HSP90B1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL6', 'ITIH2', 'JUP', 'KIF5B', 'KNG1', 'KTN1', 'LAMB1', 'LAMC1', 'LGALS1', 'LRP5', 'LTBP1', 'MAP2K6', 'MAPK11', 'MAPK14', 'MATN3', 'MEF2A', 'MEF2C', 'MEF2D', 'MET', 'MFGE8', 'MSLN', 'NTRK2', 'P4HB', 'PCSK9', 'PIK3CA', 'PIK3R1', 'PTPN11', 'PTPN1', 'RAC1', 'RHOA', 'ROBO1', 'SCG2', 'SDC2', 'SERPINA1', 'SLIT1', 'SNAI1', 'SNAI2', 'SPAG9', 'SPARCL1', 'SPP1', 'STC2', 'TCF3', 'TIMP1', 'TMEM132A', 'TNC', 'VCAN', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.28048472075433795 Spearman Correlation: 0.3047148533647521 Coefficient of Determination: 0.07456575658562326 RMSE: 0.34548740204105605 NRMSE: 0.16968095969797947 MAPE: 591.273048015939 Pearson Correlation: 0.08804350980111056 Spearman Correlation: 0.171945389769813 Coefficient of Determination: -0.06432589961042723 RMSE: 0.43029740956366097 NRMSE: 0.16090997496911577 MAPE: 4471.133804146461 Predictor: ElasticNet Pearson Correlation: 0.24912278624803383 Spearman Correlation: 0.2622965157636387 Coefficient of Determination: 0.05589645526979703 RMSE: 0.34895485669438325 NRMSE: 0.17138394808427052 MAPE: 559.3838053502074 Pearson Correlation: 0.1291605867433646 Spearman Correlation: 0.22144205516915014 Coefficient of Determination: 0.005871671989795102 RMSE: 0.4158652586904003 NRMSE: 0.15551306347452473 MAPE: 1558.5773235313243 Predictor: RandomForests Pearson Correlation: 0.2834454316037429 Spearman Correlation: 0.316508776481998 Coefficient of Determination: 0.0782606802798409 RMSE: 0.3447970092081554 NRMSE: 0.16934188360500732 MAPE: 588.5105349109942 Pearson Correlation: 0.1491057622411531 Spearman Correlation: 0.2649261045530836 Coefficient of Determination: 0.009997269038454437 RMSE: 0.41500144857945165 NRMSE: 0.15519004116427712 MAPE: 2508.487466635 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.41066420314559965 Spearman Correlation: 0.4103804957082043 Coefficient of Determination: 0.16864422535192314 RMSE: 0.1857928481674568 NRMSE: 0.1303480160573166 MAPE: 266.0010345308971 Pearson Correlation: -0.038197322380458816 Spearman Correlation: 0.13986891605854024 Coefficient of Determination: -1.6655334267591667e+18 RMSE: 288299952.31157917 NRMSE: 260106959.02306876 MAPE: 22639144473.61914 Predictor: ElasticNet Pearson Correlation: 0.30084543077940135 Spearman Correlation: 0.33775019195765477 Coefficient of Determination: 0.05657900452969522 RMSE: 0.19791937100390228 NRMSE: 0.13885570733281577 MAPE: 141.24788015224422 Pearson Correlation: 0.26653887035365104 Spearman Correlation: 0.12992811460741777 Coefficient of Determination: 0.03889136163469298 RMSE: 0.21900505250666139 NRMSE: 0.1975884413488586 MAPE: 100.53179897749783 Predictor: RandomForests Pearson Correlation: 0.3329486346614659 Spearman Correlation: 0.38008094362495276 Coefficient of Determination: 0.09813774693669353 RMSE: 0.1935109917094385 NRMSE: 0.1357628891714644 MAPE: 175.58034368764967 Pearson Correlation: 0.3233911411918786 Spearman Correlation: 0.196920138313472 Coefficient of Determination: 0.07998779978500714 RMSE: 0.21427163681049025 NRMSE: 0.1933179086878177 MAPE: 135.71342421556133 Protein: PTEN Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AR', 'BCR', 'CD79A', 'CD79B', 'CDIPT', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'DLG1', 'EGFR', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'FOXO3', 'FOXO4', 'FRK', 'GRB2', 'HRAS', 'INPP4A', 'INPP4B', 'INPP5B', 'INPP5D', 'INPP5J', 'INPP5K', 'INPPL1', 'IPMK', 'IRS1', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'MAST2', 'MDM2', 'MDM4', 'MKRN1', 'MTOR', 'MYC', 'NEDD4', 'NOTCH1', 'OCRL', 'OTUD3', 'PARK7', 'PDGFB', 'PDGFRB', 'PI4K2A', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIKFYVE', 'PIP4K2A', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PML', 'PREX2', 'PSMA6', 'PSMA7', 'PSMB9', 'PSMC6', 'PSMD10', 'PSMD5', 'PSME3', 'PTK2', 'RICTOR', 'RNF146', 'ROCK1', 'ROCK2', 'RPS27A', 'RPS6KB1', 'SACM1L', 'SHC1', 'SLC9A3R1', 'SLC9A3R2', 'SOS1', 'STK11', 'STUB1', 'SYNJ1', 'SYNJ2', 'TNKS2', 'TNKS', 'TNRC6A', 'TNRC6B', 'TP53', 'UBB', 'UBC', 'USP13', 'USP7', 'WWP2', 'XIAP', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 0.2883511412580142 Spearman Correlation: 0.26046598066075777 Coefficient of Determination: 0.08314632870280325 RMSE: 0.5448579942379443 NRMSE: 0.0851939636053388 MAPE: 400.92927419391503 Pearson Correlation: 0.14146437709955761 Spearman Correlation: 0.27577737010950487 Coefficient of Determination: 0.012187986584283883 RMSE: 0.7172929914193173 NRMSE: 0.1387521261643681 MAPE: 429.30657931970205 Predictor: ElasticNet Pearson Correlation: 0.23619514103857972 Spearman Correlation: 0.21822459344283313 Coefficient of Determination: 0.034730515534363016 RMSE: 0.5590589462140556 NRMSE: 0.08741442361254875 MAPE: 319.8498051397128 Pearson Correlation: 0.14189636514954904 Spearman Correlation: 0.28533147650007956 Coefficient of Determination: 0.00990294189629004 RMSE: 0.7181221470359369 NRMSE: 0.13891251683610664 MAPE: 436.2159568245656 Predictor: RandomForests Pearson Correlation: 0.3204810878027749 Spearman Correlation: 0.262969003336809 Coefficient of Determination: 0.09493363777398212 RMSE: 0.5413442463046909 NRMSE: 0.08464455418727088 MAPE: 346.08419961805726 Pearson Correlation: 0.00770152394525717 Spearman Correlation: 0.2887982911706934 Coefficient of Determination: -0.04648725520552199 RMSE: 0.7382890163829432 NRMSE: 0.14281356708119453 MAPE: 455.7240048498584 Protein: BRCA2 Protein Interaction Partners Count: 100 x_train_column_count: 99 x_train columns: ['ATM', 'ATRIP', 'ATR', 'BARD1', 'BLM', 'BRCA1', 'BRIP1', 'SLX4', 'RHNO1', 'RMI2', 'CDK2', 'CDK4', 'CHEK1', 'CHEK2', 'DMC1', 'DNA2', 'EME1', 'EME2', 'EXO1', 'FANCD2', 'FANCE', 'FANCG', 'FANCI', 'GEN1', 'H2AFX', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HUS1', 'KAT5', 'SPIDR', 'MLH1', 'MLH3', 'MND1', 'MRE11A', 'MSH4', 'MSH5', 'MUS81', 'NBN', 'PALB2', 'PARP1', 'PCNA', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'PSMC3IP', 'RAD17', 'RAD1', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD9A', 'RAD9B', 'RBBP8', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SPO11', 'SYCP3', 'TEX15', 'TOP3A', 'TOPBP1', 'TP53', 'UBA52', 'UBB', 'UBC', 'WRN', 'XRCC2', 'XRCC3', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.22993736121046549 Spearman Correlation: 0.2291238735392517 Coefficient of Determination: 0.052870451475122704 RMSE: 0.195096817769907 NRMSE: 0.12568646659359448 MAPE: 197.9707825244412 Pearson Correlation: -0.12624942995838162 Spearman Correlation: -0.018192424304358287 Coefficient of Determination: -6.165868069792258e+19 RMSE: 1304169997.6709228 NRMSE: 1705577712.24864 MAPE: 58226848182.75256 Predictor: ElasticNet Pearson Correlation: 0.13593646574727508 Spearman Correlation: 0.14067632441285413 Coefficient of Determination: 0.006013266587199584 RMSE: 0.19986455763962518 NRMSE: 0.12875796916709628 MAPE: 106.73053162224457 Pearson Correlation: -0.018744990291047918 Spearman Correlation: -0.0468703455828549 Coefficient of Determination: -0.09411157664405279 RMSE: 0.17372723105969218 NRMSE: 0.22719836665100657 MAPE: 111.65319378035983 Predictor: RandomForests Pearson Correlation: 0.23095802301803445 Spearman Correlation: 0.23138955676192774 Coefficient of Determination: 0.03591888743183713 RMSE: 0.19683497980868217 NRMSE: 0.12680623598562227 MAPE: 136.84879749501988 Pearson Correlation: 0.08125332849763754 Spearman Correlation: 0.049862610059672074 Coefficient of Determination: -0.08653845796965598 RMSE: 0.17312494262451295 NRMSE: 0.2264107011371385 MAPE: 114.27337931107353 Protein: CDKN2A Protein Interaction Partners Count: 100 x_train_column_count: 100 x_train columns: ['ABL1', 'AKT1', 'ARF1', 'BMI1', 'BRCA1', 'CBX7', 'CCND1', 'CCND2', 'CCND3', 'CCNL1', 'CDC45', 'CDC6', 'CDC7', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPB', 'CTCF', 'DAXX', 'E2F1', 'E2F2', 'E2F3', 'EGFR', 'EGR1', 'AGO1', 'AGO3', 'AGO4', 'ERBB2', 'EZH2', 'FOXM1', 'GMNN', 'HDAC1', 'HIF1A', 'HRAS', 'HUWE1', 'IL6', 'KRAS', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAX', 'MCM10', 'MCM2', 'MCM5', 'MDM2', 'MDM4', 'MGMT', 'MLH1', 'MOV10', 'MRAS', 'MTAP', 'MYCN', 'MYC', 'NPM1', 'NRAS', 'ORC5', 'PIK3CA', 'PIK3R1', 'PTEN', 'RASSF1', 'RB1', 'RPS27A', 'RRAS2', 'RRAS', 'RUNX3', 'SMAD3', 'SMAD4', 'SMARCA4', 'SUMO1', 'SUMO2', 'SUMO3', 'TBX2', 'TERT', 'TFDP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TP53', 'TP63', 'TRIP12', 'TWIST1', 'UBA52', 'UBB', 'UBC', 'UBE2I', 'USP7', 'VEGFA', 'WRN', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 0.27376366261932256 Spearman Correlation: 0.14964486625889334 Coefficient of Determination: 0.07494653975252319 RMSE: 0.6537213620953324 NRMSE: 0.16646414965122672 MAPE: 300.9261411266472 Pearson Correlation: -0.01913878363471329 Spearman Correlation: 0.15093384203263274 Coefficient of Determination: -2.564491624486442e+17 RMSE: 306857723.57279253 NRMSE: 77214394.09496301 MAPE: 18663611012.746586 Predictor: ElasticNet Pearson Correlation: 0.10934254394788213 Spearman Correlation: 0.10488257845950903 Coefficient of Determination: 0.008987896580926358 RMSE: 0.6766260908267434 NRMSE: 0.1722966287659452 MAPE: 270.8056992172854 Pearson Correlation: 0.16528338964008935 Spearman Correlation: 0.149528852856252 Coefficient of Determination: 0.019033358893749353 RMSE: 0.6001551481803358 NRMSE: 0.15101661965736538 MAPE: 275.0247291329403 Predictor: RandomForests Pearson Correlation: 0.24195669618963425 Spearman Correlation: 0.13675778410059236 Coefficient of Determination: 0.04170913486959238 RMSE: 0.6653619098414962 NRMSE: 0.1694283083806107 MAPE: 273.6920670617252 Pearson Correlation: 0.12376015706989528 Spearman Correlation: 0.18712418736889772 Coefficient of Determination: 0.013558563174537741 RMSE: 0.6018275573220984 NRMSE: 0.15143744679854518 MAPE: 282.53569116950194 Protein: TP53 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AKT1', 'APAF1', 'ATM', 'ATR', 'AURKA', 'AURKB', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2L1', 'BCL2', 'BCL6', 'BRCA1', 'CASP8', 'CCNA2', 'CCNE1', 'CCNG1', 'CDC25C', 'CDK2', 'CDK5', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CHEK1', 'CHEK2', 'COPS5', 'CREBBP', 'DDB2', 'DDX5', 'DYRK2', 'E2F4', 'EGR1', 'EHMT2', 'EP300', 'EZH2', 'FZR1', 'GADD45A', 'GLS2', 'GSK3B', 'HDAC1', 'HDAC2', 'HIF1A', 'HIPK2', 'HSP90AA1', 'HSPA1A', 'IGFBP3', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'MAPK14', 'MAPK1', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MCL1', 'MDM2', 'MDM4', 'MSH2', 'NGFR', 'NPM1', 'PLK3', 'PMAIP1', 'PPP1R13B', 'PPP1R13L', 'PRKDC', 'PRMT5', 'PTEN', 'RB1', 'RCHY1', 'DROSHA', 'RPA1', 'RRM2B', 'SETD7', 'SETD8', 'SFN', 'SIRT1', 'SMYD2', 'SNAI1', 'SNAI2', 'SP1', 'STAT3', 'STK11', 'SUMO1', 'SUMO2', 'TBP', 'TNFRSF10A', 'TNFRSF10B', 'TP53BP1', 'TP53BP2', 'TP53INP1', 'TP53RK', 'TXN', 'UBE2I', 'USP7', 'WRN', 'XRCC6', 'YY1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.4019079220697762 Spearman Correlation: 0.4268173189753703 Coefficient of Determination: 0.1615299766071192 RMSE: 0.38805875140611384 NRMSE: 0.09869496971085578 MAPE: 780.6778750040485 Pearson Correlation: -0.013668189397382735 Spearman Correlation: 0.26119438587853266 Coefficient of Determination: -2433968312704277.0 RMSE: 26056212.215751354 NRMSE: 6979030.993906885 MAPE: 1312333401.101492 Predictor: ElasticNet Pearson Correlation: 0.37009536050118436 Spearman Correlation: 0.4086484725546481 Coefficient of Determination: 0.11981337045128759 RMSE: 0.39759516575554343 NRMSE: 0.10112036566432094 MAPE: 654.976938934275 Pearson Correlation: 0.3676407695855615 Spearman Correlation: 0.3584976565679236 Coefficient of Determination: 0.0964989140762047 RMSE: 0.5020166972421158 NRMSE: 0.13446275538827263 MAPE: 166.13391130885773 Predictor: RandomForests Pearson Correlation: 0.3888634598083276 Spearman Correlation: 0.425503643868007 Coefficient of Determination: 0.15057272521834197 RMSE: 0.39058612601642645 NRMSE: 0.09933775681386263 MAPE: 816.9906779457987 Pearson Correlation: 0.3852242051016012 Spearman Correlation: 0.3085358473156491 Coefficient of Determination: 0.13185846857618733 RMSE: 0.4920951551701479 NRMSE: 0.13180531811173107 MAPE: 205.08041822406682 Protein: CTNNB1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'AKT1', 'APC2', 'APC', 'AR', 'AXIN1', 'AXIN2', 'BCL9', 'BTRC', 'CASP3', 'CBY1', 'CCND1', 'CDC73', 'CDH11', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDH5', 'CDH8', 'CHD8', 'CREBBP', 'CSNK1A1', 'CSNK1E', 'CTBP1', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNBIP1', 'CTNND1', 'DVL1', 'DVL2', 'DVL3', 'EGFR', 'EGF', 'EP300', 'ERBB2', 'AMER1', 'FBXW11', 'FER', 'FGFR1', 'FOXO1', 'FOXO3', 'FYN', 'FZD1', 'FZD2', 'FZD5', 'GSK3A', 'GSK3B', 'HNF4A', 'IGF1R', 'IQGAP1', 'JUN', 'JUP', 'KDR', 'KLF4', 'LEF1', 'LRP5', 'LRP6', 'MAPK9', 'MEN1', 'MET', 'MMP7', 'MYC', 'NLK', 'NOTCH1', 'PIK3CA', 'PIK3R1', 'PITX2', 'PSEN1', 'PTPN11', 'PTPN1', 'PYGO2', 'RUVBL1', 'SKP1', 'SMAD4', 'SMAD7', 'SMARCA4', 'SOX17', 'SOX2', 'SOX6', 'SOX9', 'SRC', 'TBL1X', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TGFBR1', 'TGFBR2', 'TJP1', 'TLE1', 'VCL', 'VEGFA', 'WNT1', 'WNT3A', 'WNT8A', 'WNT8B', 'YWHAZ', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.34202317895334583 Spearman Correlation: 0.2972737283814146 Coefficient of Determination: 0.11697937672087222 RMSE: 0.7103889309315807 NRMSE: 0.13973031686301746 MAPE: 698.5594985323587 Pearson Correlation: -0.11468804271184044 Spearman Correlation: 0.01677198241187599 Coefficient of Determination: -0.37612700571913593 RMSE: 0.7949497122266975 NRMSE: 0.2545965469485546 MAPE: 282.3798276897842 Predictor: ElasticNet Pearson Correlation: 0.24125731613331652 Spearman Correlation: 0.22978870832305828 Coefficient of Determination: 0.04912642149958124 RMSE: 0.7371776376457597 NRMSE: 0.1449995353355153 MAPE: 596.3638742179231 Pearson Correlation: -0.020966252854736453 Spearman Correlation: -0.01231320936112051 Coefficient of Determination: -0.03774358117933008 RMSE: 0.690327899195126 NRMSE: 0.22108958176112722 MAPE: 265.89002600838904 Predictor: RandomForests Pearson Correlation: 0.29746736956310865 Spearman Correlation: 0.2778191656890517 Coefficient of Determination: 0.06153628482520013 RMSE: 0.7323513816231965 NRMSE: 0.14405023241998358 MAPE: 694.0017804139588 Pearson Correlation: -0.08250930560205369 Spearman Correlation: -0.06581883319911672 Coefficient of Determination: -0.052360890602412447 RMSE: 0.6951727621644322 NRMSE: 0.22264123385113077 MAPE: 276.36415624146497 Protein: CCNE1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['ABL1', 'BARD1', 'BRCA1', 'CABLES1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNH', 'CCT2', 'CCT3', 'CCT4', 'CCT6A', 'CCT7', 'CDC25A', 'CDC6', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDT1', 'CKS1B', 'CKS2', 'CUL1', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'EP400', 'FOXM1', 'HDAC1', 'IFNAR1', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'MNAT1', 'MYC', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PCNA', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB7', 'PSMC1', 'PSMC2', 'PSMC4', 'PSMC5', 'PSMD10', 'PSMD11', 'PSMD14', 'PSMD1', 'PSMD3', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSME3', 'PTK6', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RHOA', 'RPS27A', 'RRN3', 'SKP1', 'SKP2', 'STAT5A', 'STAT5B', 'TCP1', 'TFDP1', 'TP53', 'TP73', 'UBB', 'UBC', 'WEE1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.3579552585476415 Spearman Correlation: 0.23635140921482814 Coefficient of Determination: 0.12813185371900482 RMSE: 0.41905552183325756 NRMSE: 0.1492628750964408 MAPE: 105.28929933467602 Pearson Correlation: -0.07054545254441177 Spearman Correlation: 0.05855944117636246 Coefficient of Determination: -2.7797332548725203e+17 RMSE: 341696846.6246401 NRMSE: 82461772.47982241 MAPE: 2642151184.1604786 Predictor: ElasticNet Pearson Correlation: 0.2599046412241909 Spearman Correlation: 0.19259808746099635 Coefficient of Determination: 0.05993160594100755 RMSE: 0.43513687447946714 NRMSE: 0.15499087247710316 MAPE: 106.70948526379644 Pearson Correlation: 0.14281816049159116 Spearman Correlation: 0.10796509016085726 Coefficient of Determination: 0.016414833317578315 RMSE: 0.6427548980530563 NRMSE: 0.1551161758942627 MAPE: 118.16324659686062 Predictor: RandomForests Pearson Correlation: 0.3582604331668688 Spearman Correlation: 0.21888983035093373 Coefficient of Determination: 0.11780230951648551 RMSE: 0.4215306133428393 NRMSE: 0.1501444749217593 MAPE: 102.70029788934343 Pearson Correlation: 0.24884132467643694 Spearman Correlation: 0.11891689870607375 Coefficient of Determination: 0.0519002641379569 RMSE: 0.6310538524112698 NRMSE: 0.15229236006739624 MAPE: 118.31091144815771 Protein: CCND1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ACTL6A', 'AKT1', 'ARID1A', 'ARID2', 'AR', 'ATF2', 'BRD2', 'BTG2', 'CCNA1', 'CCNB1', 'CCNE1', 'CCNH', 'CDC25A', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CKS1B', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUL1', 'DNMT3A', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'AGO2', 'EP300', 'ESR1', 'FOS', 'FOXA1', 'FOXM1', 'GADD45A', 'GATA3', 'GLI1', 'GLI3', 'GSK3B', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC4', 'HIST1H2BA', 'HIST2H2BE', 'HNF1A', 'IFNAR1', 'JAK2', 'JUN', 'KAT2B', 'LEF1', 'LYN', 'MAML1', 'MYB', 'MYC', 'NOTCH1', 'PBRM1', 'PCNA', 'PRMT5', 'PSMA6', 'PSMC6', 'PSMD10', 'PSMD6', 'PSMD7', 'PSME3', 'PTK6', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RELA', 'RUNX1', 'RUNX3', 'SKP1', 'SKP2', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'SUV39H1', 'TCF7L2', 'TFDP1', 'TP53', 'WDR77', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.22265827069817762 Spearman Correlation: 0.16093968999722222 Coefficient of Determination: 0.04957589442237409 RMSE: 0.2219048483467047 NRMSE: 0.1397667340690219 MAPE: 707.8660124191807 Pearson Correlation: 0.07237181590913447 Spearman Correlation: 0.061810176526120884 Coefficient of Determination: -3.311398093629374e+17 RMSE: 158799880.78146178 NRMSE: 101455310.2959723 MAPE: 12366780535.637562 Predictor: ElasticNet Pearson Correlation: 0.11519715800301644 Spearman Correlation: 0.10492943191108492 Coefficient of Determination: 0.004474247583151847 RMSE: 0.22710898649714745 NRMSE: 0.1430445596701775 MAPE: 692.486842383102 Pearson Correlation: -0.019303436056030895 Spearman Correlation: -0.021769256622382056 Coefficient of Determination: -0.004018910303814627 RMSE: 0.27651291537691225 NRMSE: 0.17666073483402475 MAPE: 269.498891204829 Predictor: RandomForests Pearson Correlation: 0.20783295691945042 Spearman Correlation: 0.14533218289841943 Coefficient of Determination: 0.036498069010718504 RMSE: 0.22342633646992374 NRMSE: 0.14072504312577078 MAPE: 699.463704522491 Pearson Correlation: -0.08207091317281663 Spearman Correlation: 0.0289634842375531 Coefficient of Determination: -0.03090206088780212 RMSE: 0.2801903532390342 NRMSE: 0.17901020510792998 MAPE: 266.6791018384168 Protein: ERBB2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ADAM17', 'ADRB2', 'AREG', 'ARHGEF11', 'ARHGEF12', 'BTC', 'CBL', 'CCND1', 'CD44', 'CDC37', 'CDH1', 'CTNNB1', 'CTNND1', 'CUL5', 'DIAPH1', 'DOCK7', 'EGFR', 'EGF', 'ERBB2IP', 'ERBB3', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FYN', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IL6R', 'IL6', 'INS', 'JAK1', 'JAK2', 'KRAS', 'LRPPRC', 'MAP2K1', 'MAPK8', 'MATK', 'MEMO1', 'MUC1', 'MUC4', 'MYC', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'PGAP3', 'PGR', 'PIK3CA', 'PIK3CB', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PLXNB1', 'PRKACA', 'PTEN', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'RHOA', 'RHOB', 'RHOC', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'RPS27A', 'SEMA4D', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SRC', 'STAT1', 'STAT3', 'STUB1', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TGFA', 'TP53', 'UBA52', 'UBB', 'UBC', 'VEGFA', 'YES1', 'YY1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.3797229248416312 Spearman Correlation: 0.39530687894147926 Coefficient of Determination: 0.14418927850288765 RMSE: 0.9509294961495933 NRMSE: 0.16200649030607925 MAPE: 512.4568652163015 Pearson Correlation: -0.07753799422713956 Spearman Correlation: 0.17888784300444183 Coefficient of Determination: -1.6378556549176335e+18 RMSE: 1110497435.208806 NRMSE: 245712453.85746345 MAPE: 9763414351.422695 Predictor: ElasticNet Pearson Correlation: 0.3533868134690494 Spearman Correlation: 0.3917681236945966 Coefficient of Determination: 0.11990873043566241 RMSE: 0.964324750544398 NRMSE: 0.16428859235470264 MAPE: 663.5888895913544 Pearson Correlation: 0.2676245275753597 Spearman Correlation: 0.3019528770587871 Coefficient of Determination: 0.05907158818095315 RMSE: 0.8417013792442354 NRMSE: 0.18623772081961176 MAPE: 603.0180737067166 Predictor: RandomForests Pearson Correlation: 0.3413704472421602 Spearman Correlation: 0.39690004606210294 Coefficient of Determination: 0.11465015634317921 RMSE: 0.9672013958783519 NRMSE: 0.16477867623189463 MAPE: 716.3074518772465 Pearson Correlation: 0.2571632619348038 Spearman Correlation: 0.21329582526950516 Coefficient of Determination: 0.04804694341898419 RMSE: 0.8466180314249682 NRMSE: 0.18732559606703578 MAPE: 690.1104508482179 Protein: ERBB3 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AKT2', 'ANGPT1', 'ANGPT2', 'AREG', 'AR', 'BDNF', 'BMP4', 'BTC', 'CBLB', 'CBL', 'CCND1', 'CDH1', 'CSF1', 'CSK', 'CTNNB1', 'DCN', 'DOCK7', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FGF10', 'FGF19', 'FGF1', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FIGF', 'FLNA', 'FOXO3', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IGF1', 'IGF2', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'JAK1', 'JAK2', 'KITLG', 'KRAS', 'LAMA1', 'LAMB1', 'LAMC2', 'MAP2K1', 'MAPK8', 'MET', 'MUC4', 'NGF', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NTF3', 'PA2G4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PRKACA', 'PTEN', 'PTPN11', 'RNF41', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SOX10', 'SRC', 'TGFA', 'VEGFA', 'VEGFB', 'VEGFC', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.37939165094009797 Spearman Correlation: 0.34989303286807855 Coefficient of Determination: 0.14393752852049557 RMSE: 0.4338528142634531 NRMSE: 0.11708442229014217 MAPE: 225.51376616810447 Pearson Correlation: 0.2480887703663308 Spearman Correlation: 0.30146199742476315 Coefficient of Determination: -2.9456458624573245e+18 RMSE: 715639829.0510385 NRMSE: 346248296.45789635 MAPE: 10648561275.171787 Predictor: ElasticNet Pearson Correlation: 0.32276130544633214 Spearman Correlation: 0.31802495471477427 Coefficient of Determination: 0.09296092409781787 RMSE: 0.4465835155513045 NRMSE: 0.1205200731759546 MAPE: 232.15849472953528 Pearson Correlation: 0.3344939321500177 Spearman Correlation: 0.3095429893494486 Coefficient of Determination: 0.03870023718723348 RMSE: 0.40882143130339915 NRMSE: 0.19780023190154977 MAPE: 263.10344650901044 Predictor: RandomForests Pearson Correlation: 0.34437703164378963 Spearman Correlation: 0.3311593376113728 Coefficient of Determination: 0.09243207726056013 RMSE: 0.44671368627430447 NRMSE: 0.12055520251798138 MAPE: 235.52672164316812 Pearson Correlation: 0.33147861236745935 Spearman Correlation: 0.3163692318090832 Coefficient of Determination: 0.03965390576388872 RMSE: 0.40861859296313374 NRMSE: 0.1977020925485929 MAPE: 255.265182373486
Unnormalized
scenario = Scenario.Top100InteractionPartners_Mutations
normalizeTechnique = NormalizeTechnique.UN
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 10.7401 | 141.1933 | 314.4482 | 0.0000 | 0.0 | 0.000 | 2.9988 | 9.4249 | 0.0 | 0.0000 | ... | 74.1138 | 533.3625 | 1053.4444 | 94.6772 | 881.2262 | 5343.4779 | 934.3482 | 508.0867 | 52.2652 | 0.8568 |
| TCGA-A1-A0SH-01 | 3.0048 | 79.8003 | 95.7054 | 0.0000 | 0.0 | 0.000 | 0.3612 | 3.9727 | 0.0 | 0.0000 | ... | 87.7601 | 581.0946 | 801.3977 | 19.8634 | 1353.2389 | 5464.9614 | 1312.7898 | 1001.1151 | 455.7746 | 0.0000 |
| TCGA-A1-A0SJ-01 | 4.9419 | 134.8733 | 63.6488 | 0.3658 | 0.0 | 0.000 | 0.3658 | 4.7554 | 0.0 | 0.7316 | ... | 83.7677 | 2731.4129 | 834.3850 | 51.2117 | 1092.6383 | 3032.0988 | 958.3905 | 718.7929 | 43.5299 | 0.0000 |
| TCGA-A1-A0SK-01 | 28.8560 | 1119.1932 | 166.7192 | 0.3152 | 0.0 | 1.891 | 0.0000 | 3.4668 | 0.0 | 0.0000 | ... | 69.0199 | 610.1481 | 1775.6067 | 158.5251 | 1380.7123 | 591.2386 | 1798.9285 | 1335.6445 | 49.4800 | 0.0000 |
| TCGA-A1-A0SQ-01 | 1.0368 | 41.5532 | 75.8447 | 0.0000 | 0.0 | 0.000 | 0.4034 | 5.6480 | 0.0 | 0.0000 | ... | 106.1019 | 617.2466 | 875.0378 | 25.4160 | 969.4402 | 2903.0761 | 715.6833 | 691.4776 | 17.7509 | 0.0000 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AATF', 'ABL1', 'AKT1', 'AR', 'ASF1A', 'ATF2', 'BGLAP', 'CASP3', 'CBX4', 'CCNA1', 'CCNA2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CEBPA', 'COL1A1', 'CREBBP', 'CTBP1', 'DNMT1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'ELF1', 'EP300', 'FOXM1', 'FZR1', 'GNB2L1', 'H1F0', 'H2AFV', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HIST1H2BA', 'HIST2H2AC', 'HIST2H2BE', 'HMGA1', 'HMGA2', 'HSP90AA1', 'ID2', 'JUN', 'MAPK14', 'MAPK1', 'MAPK3', 'MDM2', 'MEF2C', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NFYC', 'PCNA', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP2CA', 'PPP2CB', 'PRIM1', 'PRIM2', 'RAF1', 'RBBP4', 'RUNX2', 'SIRT1', 'SKP2', 'SMARCA2', 'SMC2', 'SMC4', 'SP100', 'SP1', 'SP3', 'SPI1', 'SUV39H1', 'TAF1', 'TBP', 'TERT', 'TFDP1', 'TP53BP1', 'TP53', 'TP73', 'YAP1', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.4862578117183481 Spearman Correlation: 0.45569906485102674 Coefficient of Determination: 0.2364466594571163 RMSE: 0.1958237184203574 NRMSE: 0.07416160515824934 MAPE: 356.69266626457096 Pearson Correlation: 0.18895593075451095 Spearman Correlation: 0.22351965661886644 Coefficient of Determination: -0.1423649693680913 RMSE: 0.299766465912259 NRMSE: 0.14808913310851976 MAPE: 238.76208571234253 Predictor: ElasticNet Pearson Correlation: 0.48577648803525436 Spearman Correlation: 0.45580825183959534 Coefficient of Determination: 0.23596964055904712 RMSE: 0.19588487788662157 NRMSE: 0.07418476723598619 MAPE: 351.93038057391004 Pearson Correlation: 0.19141592140105357 Spearman Correlation: 0.2237489025460931 Coefficient of Determination: -0.13658853409916105 RMSE: 0.2990076120672217 NRMSE: 0.14771424792005933 MAPE: 238.2257131624123 Predictor: RandomForests Pearson Correlation: 0.5395872065276396 Spearman Correlation: 0.3993118263410426 Coefficient of Determination: 0.17191250113514878 RMSE: 0.20393121954380186 NRMSE: 0.07723204678803326 MAPE: 185.70358823305227 Pearson Correlation: 0.19312819479420687 Spearman Correlation: 0.3103209442981173 Coefficient of Determination: -0.006585797189794462 RMSE: 0.2813882823609106 NRMSE: 0.1390100346111413 MAPE: 126.80089897760412 Protein: CDH1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ACTA1', 'ACTN1', 'ADAM10', 'ADAM15', 'CA2', 'CASP3', 'CBLL1', 'CDC42', 'CDH17', 'CDH3', 'CDH5', 'CTBP1', 'CTNNA1', 'CTNNB1', 'CTNND1', 'CTTN', 'DLG1', 'EFNA1', 'EGFR', 'EGF', 'ENAH', 'EPCAM', 'EPHA2', 'EXOC3', 'EXOC4', 'FER', 'FLOT1', 'FLOT2', 'FMN1', 'FYN', 'GDNF', 'GNA12', 'GNA13', 'HGF', 'HGS', 'IGF1R', 'IGF1', 'IGF2', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'ITGA6', 'ITGAE', 'ITGB4', 'ITGB7', 'AJUBA', 'JUP', 'KIFC3', 'KLK7', 'KLRG1', 'LAMB1', 'LAMC2', 'LIMA1', 'MAPK1', 'MAPK3', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MLLT4', 'MMP3', 'MMP7', 'MMP9', 'MYO6', 'NCSTN', 'NUMB', 'PARD6A', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PLEKHA7', 'PLG', 'PRKCI', 'PRKCZ', 'PSEN1', 'PVRL1', 'PVRL2', 'RAB5A', 'RAB7A', 'RAC1', 'RAP1A', 'RET', 'RHOA', 'SKIL', 'SMAD3', 'SMAD4', 'SNAI1', 'SNAI2', 'SNAI3', 'SRC', 'STX4', 'TJP1', 'TWIST1', 'VASP', 'VCL', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 0.7465805631339264 Spearman Correlation: 0.7089224445362644 Coefficient of Determination: 0.5573825372493704 RMSE: 0.7507398575299529 NRMSE: 0.12618961180810395 MAPE: 483.99451870121106 Pearson Correlation: 0.5837379908401908 Spearman Correlation: 0.5459028387474394 Coefficient of Determination: 0.24654060076167683 RMSE: 1.007168671253308 NRMSE: 0.16312537191106669 MAPE: 472.698738797229 Predictor: ElasticNet Pearson Correlation: 0.7253733492299673 Spearman Correlation: 0.6988353956164639 Coefficient of Determination: 0.5253155944671046 RMSE: 0.7774593370037339 NRMSE: 0.13068080900336745 MAPE: 560.2912494240938 Pearson Correlation: 0.4939411043177358 Spearman Correlation: 0.5380889669300557 Coefficient of Determination: 0.076847554466832 RMSE: 1.1148308881521984 NRMSE: 0.1805628078378087 MAPE: 500.08269945168576 Predictor: RandomForests Pearson Correlation: 0.7426556664990703 Spearman Correlation: 0.6906466081325479 Coefficient of Determination: 0.546860378782499 RMSE: 0.7596109561461517 NRMSE: 0.12768072817745812 MAPE: 206.636462071981 Pearson Correlation: 0.7522562898289546 Spearman Correlation: 0.6985945239376057 Coefficient of Determination: 0.5607856505182343 RMSE: 0.7689720257119443 NRMSE: 0.12454601822291865 MAPE: 144.61405380512727 Protein: CDH2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ADAM10', 'AFP', 'AHSG', 'ALB', 'APLP2', 'APOA1', 'APOB', 'APOE', 'APP', 'AXIN1', 'BDNF', 'BMP4', 'BNIP2', 'CALU', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH17', 'CDH18', 'CDH1', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDON', 'CREBBP', 'CSF1', 'CST3', 'CTNNA1', 'CTNNA2', 'CTNNB1', 'CTNND1', 'CYR61', 'FAM20C', 'FBN1', 'FER', 'FGFR1', 'FN1', 'FSTL1', 'GAS6', 'GJA1', 'GOLM1', 'GPC3', 'GRIA2', 'HSP90B1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL6', 'ITIH2', 'JUP', 'KIF5B', 'KNG1', 'KTN1', 'LAMB1', 'LAMC1', 'LGALS1', 'LRP5', 'LTBP1', 'MAP2K6', 'MAPK11', 'MAPK14', 'MATN3', 'MEF2A', 'MEF2C', 'MEF2D', 'MET', 'MFGE8', 'MSLN', 'NTRK2', 'P4HB', 'PCSK9', 'PIK3CA', 'PIK3R1', 'PTPN11', 'PTPN1', 'RAC1', 'RHOA', 'ROBO1', 'SCG2', 'SDC2', 'SERPINA1', 'SLIT1', 'SNAI1', 'SNAI2', 'SPAG9', 'SPARCL1', 'SPP1', 'STC2', 'TCF3', 'TIMP1', 'TMEM132A', 'TNC', 'VCAN', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.503074142833867 Spearman Correlation: 0.49401859243815943 Coefficient of Determination: 0.25308359318803 RMSE: 0.3208023112585157 NRMSE: 0.1185141182467262 MAPE: 3299.1466233572746 Pearson Correlation: -0.038846196343288314 Spearman Correlation: 0.06095502877768023 Coefficient of Determination: -0.6927044819123591 RMSE: 0.48803952060654576 NRMSE: 0.2518653664687752 MAPE: 207.3311897214957 Predictor: ElasticNet Pearson Correlation: 0.502317693903967 Spearman Correlation: 0.49481300728680094 Coefficient of Determination: 0.25232128411345656 RMSE: 0.32096597625839934 NRMSE: 0.11857458106905738 MAPE: 3212.1500753141263 Pearson Correlation: -0.050911307866975744 Spearman Correlation: 0.05080479953175301 Coefficient of Determination: -0.5574275122981338 RMSE: 0.4681320127620013 NRMSE: 0.2415915842297576 MAPE: 189.5951291973325 Predictor: RandomForests Pearson Correlation: 0.533289294515734 Spearman Correlation: 0.47801886118231335 Coefficient of Determination: 0.17443795966023257 RMSE: 0.3372689392832374 NRMSE: 0.12459739081789574 MAPE: 846.5144176700857 Pearson Correlation: 0.09229937519677632 Spearman Correlation: 0.16294995610184373 Coefficient of Determination: 0.003838602117242851 RMSE: 0.37439433952349765 NRMSE: 0.19321584327991828 MAPE: 107.14074793900335 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.5729780199091096 Spearman Correlation: 0.5407177293306035 Coefficient of Determination: 0.3283038112989639 RMSE: 0.1711261830213943 NRMSE: 0.12005821899126838 MAPE: 542.8036872087162 Pearson Correlation: 0.033830325008307065 Spearman Correlation: 0.3885523363574286 Coefficient of Determination: -2.438897268426167 RMSE: 0.3793773019369883 NRMSE: 0.29037458721095766 MAPE: 346.69398891046353 Predictor: ElasticNet Pearson Correlation: 0.5726825739305108 Spearman Correlation: 0.5406775107016716 Coefficient of Determination: 0.32795488613497126 RMSE: 0.17117062460085566 NRMSE: 0.12008939818772497 MAPE: 547.2323088460702 Pearson Correlation: 0.03382422226001366 Spearman Correlation: 0.3878938640132671 Coefficient of Determination: -2.390129800273074 RMSE: 0.3766776964316849 NRMSE: 0.2883083148477125 MAPE: 342.9068233400213 Predictor: RandomForests Pearson Correlation: 0.5488348194628491 Spearman Correlation: 0.5498808348759677 Coefficient of Determination: 0.26165640371302934 RMSE: 0.17941521825494025 NRMSE: 0.12587361666872948 MAPE: 552.0017208748178 Pearson Correlation: 0.4711648997100896 Spearman Correlation: 0.5027704614183982 Coefficient of Determination: 0.20767549842787159 RMSE: 0.1821014003704093 NRMSE: 0.1393800279909142 MAPE: 358.2338803004399 Protein: PTEN Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AR', 'BCR', 'CD79A', 'CD79B', 'CDIPT', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'DLG1', 'EGFR', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'FOXO3', 'FOXO4', 'FRK', 'GRB2', 'HRAS', 'INPP4A', 'INPP4B', 'INPP5B', 'INPP5D', 'INPP5J', 'INPP5K', 'INPPL1', 'IPMK', 'IRS1', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'MAST2', 'MDM2', 'MDM4', 'MKRN1', 'MTOR', 'MYC', 'NEDD4', 'NOTCH1', 'OCRL', 'OTUD3', 'PARK7', 'PDGFB', 'PDGFRB', 'PI4K2A', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIKFYVE', 'PIP4K2A', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PML', 'PREX2', 'PSMA6', 'PSMA7', 'PSMB9', 'PSMC6', 'PSMD10', 'PSMD5', 'PSME3', 'PTK2', 'RICTOR', 'RNF146', 'ROCK1', 'ROCK2', 'RPS27A', 'RPS6KB1', 'SACM1L', 'SHC1', 'SLC9A3R1', 'SLC9A3R2', 'SOS1', 'STK11', 'STUB1', 'SYNJ1', 'SYNJ2', 'TNKS2', 'TNKS', 'TNRC6A', 'TNRC6B', 'TP53', 'UBB', 'UBC', 'USP13', 'USP7', 'WWP2', 'XIAP', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 0.6084447249063444 Spearman Correlation: 0.5776381482754656 Coefficient of Determination: 0.3702049832663573 RMSE: 0.4971675185134956 NRMSE: 0.07773708365467838 MAPE: 737.5979788027113 Pearson Correlation: -0.04288190174572013 Spearman Correlation: 0.15686274509803924 Coefficient of Determination: -1.3550831931467444 RMSE: 0.7621980872262119 NRMSE: 0.25120232259778913 MAPE: 266.34944466623836 Predictor: ElasticNet Pearson Correlation: 0.5996803898081673 Spearman Correlation: 0.574414691097688 Coefficient of Determination: 0.35961286902864253 RMSE: 0.5013308555342506 NRMSE: 0.07838806278387156 MAPE: 789.3597609626622 Pearson Correlation: -0.007327926147407491 Spearman Correlation: 0.1784508828406985 Coefficient of Determination: -1.1168608418160173 RMSE: 0.7226215062178332 NRMSE: 0.23815882480318804 MAPE: 246.47048620484009 Predictor: RandomForests Pearson Correlation: 0.5832693742551751 Spearman Correlation: 0.5373280768749423 Coefficient of Determination: 0.3039091264783117 RMSE: 0.5226802702709819 NRMSE: 0.08172625600359344 MAPE: 361.54939429879863 Pearson Correlation: 0.2936758845392045 Spearman Correlation: 0.3134667275215896 Coefficient of Determination: 0.07044760595945221 RMSE: 0.4788523960287934 NRMSE: 0.15781833630900843 MAPE: 185.36052712411103 Protein: BRCA2 Protein Interaction Partners Count: 100 x_train_column_count: 99 x_train columns: ['ATM', 'ATRIP', 'ATR', 'BARD1', 'BLM', 'BRCA1', 'BRIP1', 'SLX4', 'RHNO1', 'RMI2', 'CDK2', 'CDK4', 'CHEK1', 'CHEK2', 'DMC1', 'DNA2', 'EME1', 'EME2', 'EXO1', 'FANCD2', 'FANCE', 'FANCG', 'FANCI', 'GEN1', 'H2AFX', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HUS1', 'KAT5', 'SPIDR', 'MLH1', 'MLH3', 'MND1', 'MRE11A', 'MSH4', 'MSH5', 'MUS81', 'NBN', 'PALB2', 'PARP1', 'PCNA', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'PSMC3IP', 'RAD17', 'RAD1', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD9A', 'RAD9B', 'RBBP8', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SPO11', 'SYCP3', 'TEX15', 'TOP3A', 'TOPBP1', 'TP53', 'UBA52', 'UBB', 'UBC', 'WRN', 'XRCC2', 'XRCC3', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.5224903786308419 Spearman Correlation: 0.47863791039641596 Coefficient of Determination: 0.27299619576180056 RMSE: 0.16849226023559108 NRMSE: 0.10899580831096677 MAPE: 256.5611455369438 Pearson Correlation: 0.17292506886008885 Spearman Correlation: 0.18939150984248526 Coefficient of Determination: -0.21826325999553675 RMSE: 0.2039008213849787 NRMSE: 0.2040640726430932 MAPE: 243.58121591235306 Predictor: ElasticNet Pearson Correlation: 0.5193787328510173 Spearman Correlation: 0.4746325918504171 Coefficient of Determination: 0.2696987392903858 RMSE: 0.16887394140018602 NRMSE: 0.10924271369993792 MAPE: 243.73925692744675 Pearson Correlation: 0.1760406641227253 Spearman Correlation: 0.18597476584586778 Coefficient of Determination: -0.2114869516406983 RMSE: 0.2033329549858181 NRMSE: 0.2034957515870878 MAPE: 248.89847319537571 Predictor: RandomForests Pearson Correlation: 0.5295849578633959 Spearman Correlation: 0.4423018185215187 Coefficient of Determination: 0.1563190100621723 RMSE: 0.18151007917940512 NRMSE: 0.11741689362516988 MAPE: 150.74681234420754 Pearson Correlation: 0.25929612904848853 Spearman Correlation: 0.2569337832088819 Coefficient of Determination: 0.05061802888745981 RMSE: 0.1799985024195879 NRMSE: 0.18014261651279817 MAPE: 115.58269570345665 Protein: CDKN2A Protein Interaction Partners Count: 100 x_train_column_count: 100 x_train columns: ['ABL1', 'AKT1', 'ARF1', 'BMI1', 'BRCA1', 'CBX7', 'CCND1', 'CCND2', 'CCND3', 'CCNL1', 'CDC45', 'CDC6', 'CDC7', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPB', 'CTCF', 'DAXX', 'E2F1', 'E2F2', 'E2F3', 'EGFR', 'EGR1', 'AGO1', 'AGO3', 'AGO4', 'ERBB2', 'EZH2', 'FOXM1', 'GMNN', 'HDAC1', 'HIF1A', 'HRAS', 'HUWE1', 'IL6', 'KRAS', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAX', 'MCM10', 'MCM2', 'MCM5', 'MDM2', 'MDM4', 'MGMT', 'MLH1', 'MOV10', 'MRAS', 'MTAP', 'MYCN', 'MYC', 'NPM1', 'NRAS', 'ORC5', 'PIK3CA', 'PIK3R1', 'PTEN', 'RASSF1', 'RB1', 'RPS27A', 'RRAS2', 'RRAS', 'RUNX3', 'SMAD3', 'SMAD4', 'SMARCA4', 'SUMO1', 'SUMO2', 'SUMO3', 'TBX2', 'TERT', 'TFDP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TP53', 'TP63', 'TRIP12', 'TWIST1', 'UBA52', 'UBB', 'UBC', 'UBE2I', 'USP7', 'VEGFA', 'WRN', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 0.7137945166764518 Spearman Correlation: 0.6477957992494499 Coefficient of Determination: 0.5095026120373696 RMSE: 0.45012859992749266 NRMSE: 0.1017584717819583 MAPE: 191.87379450599917 Pearson Correlation: 0.5544144566798171 Spearman Correlation: 0.4688127987513413 Coefficient of Determination: 0.2880037890462971 RMSE: 0.6302036189402055 NRMSE: 0.17018731270326912 MAPE: 732.5519835894771 Predictor: ElasticNet Pearson Correlation: 0.713783532157686 Spearman Correlation: 0.6478059895186301 Coefficient of Determination: 0.5094868466830045 RMSE: 0.4501358337885082 NRMSE: 0.1017601071071568 MAPE: 190.18208350696614 Pearson Correlation: 0.554220825747586 Spearman Correlation: 0.4690908204077651 Coefficient of Determination: 0.2880003879426064 RMSE: 0.6302051241345181 NRMSE: 0.17018771918296466 MAPE: 733.1363124701829 Predictor: RandomForests Pearson Correlation: 0.6512682096034268 Spearman Correlation: 0.5862298214602163 Coefficient of Determination: 0.41559769744228703 RMSE: 0.49133105775668623 NRMSE: 0.11107291912663866 MAPE: 186.81586722629325 Pearson Correlation: 0.7138871852146856 Spearman Correlation: 0.5770326235678206 Coefficient of Determination: 0.4634281612235852 RMSE: 0.5470864888726946 NRMSE: 0.14774142286597208 MAPE: 327.45824804160657 Protein: TP53 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AKT1', 'APAF1', 'ATM', 'ATR', 'AURKA', 'AURKB', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2L1', 'BCL2', 'BCL6', 'BRCA1', 'CASP8', 'CCNA2', 'CCNE1', 'CCNG1', 'CDC25C', 'CDK2', 'CDK5', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CHEK1', 'CHEK2', 'COPS5', 'CREBBP', 'DDB2', 'DDX5', 'DYRK2', 'E2F4', 'EGR1', 'EHMT2', 'EP300', 'EZH2', 'FZR1', 'GADD45A', 'GLS2', 'GSK3B', 'HDAC1', 'HDAC2', 'HIF1A', 'HIPK2', 'HSP90AA1', 'HSPA1A', 'IGFBP3', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'MAPK14', 'MAPK1', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MCL1', 'MDM2', 'MDM4', 'MSH2', 'NGFR', 'NPM1', 'PLK3', 'PMAIP1', 'PPP1R13B', 'PPP1R13L', 'PRKDC', 'PRMT5', 'PTEN', 'RB1', 'RCHY1', 'DROSHA', 'RPA1', 'RRM2B', 'SETD7', 'SETD8', 'SFN', 'SIRT1', 'SMYD2', 'SNAI1', 'SNAI2', 'SP1', 'STAT3', 'STK11', 'SUMO1', 'SUMO2', 'TBP', 'TNFRSF10A', 'TNFRSF10B', 'TP53BP1', 'TP53BP2', 'TP53INP1', 'TP53RK', 'TXN', 'UBE2I', 'USP7', 'WRN', 'XRCC6', 'YY1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.664368256850303 Spearman Correlation: 0.591699374815362 Coefficient of Determination: 0.4413851807103102 RMSE: 0.33843978817181203 NRMSE: 0.08133616634746745 MAPE: 748.8971530668214 Pearson Correlation: 0.503928246772593 Spearman Correlation: 0.5015461906155497 Coefficient of Determination: 0.19791589921130814 RMSE: 0.37671943992878126 NRMSE: 0.13546673376560872 MAPE: 981.800935097715 Predictor: ElasticNet Pearson Correlation: 0.6582163201204385 Spearman Correlation: 0.5904133473463096 Coefficient of Determination: 0.43324496928329614 RMSE: 0.34089676509784694 NRMSE: 0.08192664385913169 MAPE: 717.6716532260932 Pearson Correlation: 0.47244402340184516 Spearman Correlation: 0.46173056287191494 Coefficient of Determination: 0.15605193985699206 RMSE: 0.3864256423887274 NRMSE: 0.13895704354299954 MAPE: 849.6983049119542 Predictor: RandomForests Pearson Correlation: 0.6097534973256057 Spearman Correlation: 0.5139039652587687 Coefficient of Determination: 0.33750018110792934 RMSE: 0.36856837692133904 NRMSE: 0.08857687501113652 MAPE: 615.4124035147506 Pearson Correlation: 0.4836200045164307 Spearman Correlation: 0.46771331891245216 Coefficient of Determination: 0.23275960811854368 RMSE: 0.3684459670531218 NRMSE: 0.13249162754975793 MAPE: 330.3142319701158 Protein: CTNNB1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'AKT1', 'APC2', 'APC', 'AR', 'AXIN1', 'AXIN2', 'BCL9', 'BTRC', 'CASP3', 'CBY1', 'CCND1', 'CDC73', 'CDH11', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDH5', 'CDH8', 'CHD8', 'CREBBP', 'CSNK1A1', 'CSNK1E', 'CTBP1', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNBIP1', 'CTNND1', 'DVL1', 'DVL2', 'DVL3', 'EGFR', 'EGF', 'EP300', 'ERBB2', 'AMER1', 'FBXW11', 'FER', 'FGFR1', 'FOXO1', 'FOXO3', 'FYN', 'FZD1', 'FZD2', 'FZD5', 'GSK3A', 'GSK3B', 'HNF4A', 'IGF1R', 'IQGAP1', 'JUN', 'JUP', 'KDR', 'KLF4', 'LEF1', 'LRP5', 'LRP6', 'MAPK9', 'MEN1', 'MET', 'MMP7', 'MYC', 'NLK', 'NOTCH1', 'PIK3CA', 'PIK3R1', 'PITX2', 'PSEN1', 'PTPN11', 'PTPN1', 'PYGO2', 'RUVBL1', 'SKP1', 'SMAD4', 'SMAD7', 'SMARCA4', 'SOX17', 'SOX2', 'SOX6', 'SOX9', 'SRC', 'TBL1X', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TGFBR1', 'TGFBR2', 'TJP1', 'TLE1', 'VCL', 'VEGFA', 'WNT1', 'WNT3A', 'WNT8A', 'WNT8B', 'YWHAZ', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 0.6711039396421054 Spearman Correlation: 0.6511231739875518 Coefficient of Determination: 0.4503804978031546 RMSE: 0.5465590755337435 NRMSE: 0.11015560705680383 MAPE: 519.1657659772924 Pearson Correlation: 0.39460946763485044 Spearman Correlation: 0.4038484050336553 Coefficient of Determination: 0.006200638227199851 RMSE: 0.7486259379850011 NRMSE: 0.1857356071019206 MAPE: 421.8561758460596 Predictor: ElasticNet Pearson Correlation: 0.6702230918797334 Spearman Correlation: 0.6528132088206428 Coefficient of Determination: 0.44919620555166373 RMSE: 0.5471476075691926 NRMSE: 0.11027422205477812 MAPE: 502.1037225393969 Pearson Correlation: 0.412977319632345 Spearman Correlation: 0.3977953370402888 Coefficient of Determination: 0.05608384392719379 RMSE: 0.7295956286355885 NRMSE: 0.18101414891966172 MAPE: 417.6538394621544 Predictor: RandomForests Pearson Correlation: 0.6656992239056829 Spearman Correlation: 0.6133953454672096 Coefficient of Determination: 0.4349807211043826 RMSE: 0.5541631919467963 NRMSE: 0.11168816976979591 MAPE: 329.20271777914945 Pearson Correlation: 0.5336624031149049 Spearman Correlation: 0.4858586622262577 Coefficient of Determination: 0.26869688378404666 RMSE: 0.6421910157662638 NRMSE: 0.15932888794875796 MAPE: 230.86504621225313 Protein: CCNE1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['ABL1', 'BARD1', 'BRCA1', 'CABLES1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNH', 'CCT2', 'CCT3', 'CCT4', 'CCT6A', 'CCT7', 'CDC25A', 'CDC6', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDT1', 'CKS1B', 'CKS2', 'CUL1', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'EP400', 'FOXM1', 'HDAC1', 'IFNAR1', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'MNAT1', 'MYC', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PCNA', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB7', 'PSMC1', 'PSMC2', 'PSMC4', 'PSMC5', 'PSMD10', 'PSMD11', 'PSMD14', 'PSMD1', 'PSMD3', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSME3', 'PTK6', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RHOA', 'RPS27A', 'RRN3', 'SKP1', 'SKP2', 'STAT5A', 'STAT5B', 'TCP1', 'TFDP1', 'TP53', 'TP73', 'UBB', 'UBC', 'WEE1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.8774175459671831 Spearman Correlation: 0.7204934647632695 Coefficient of Determination: 0.7698615499710739 RMSE: 0.23203034435425013 NRMSE: 0.05599593222343561 MAPE: 55.5136316069801 Pearson Correlation: 0.8048281276095115 Spearman Correlation: 0.6018242122719735 Coefficient of Determination: 0.6373795512018194 RMSE: 0.32339462345186915 NRMSE: 0.11518953640315908 MAPE: 49.1112522713996 Predictor: ElasticNet Pearson Correlation: 0.8774156284602718 Spearman Correlation: 0.7209687265282357 Coefficient of Determination: 0.7698580609312896 RMSE: 0.232032103208614 NRMSE: 0.05599635668813235 MAPE: 55.51889665620352 Pearson Correlation: 0.8052709562703723 Spearman Correlation: 0.6021753975221931 Coefficient of Determination: 0.6384160553751224 RMSE: 0.32293210161617963 NRMSE: 0.11502479131475676 MAPE: 49.10119181100377 Predictor: RandomForests Pearson Correlation: 0.8568325247662703 Spearman Correlation: 0.7204752981992786 Coefficient of Determination: 0.7283520088609318 RMSE: 0.25208873649532704 NRMSE: 0.06083662825381351 MAPE: 54.930323127980664 Pearson Correlation: 0.837816825298056 Spearman Correlation: 0.7059538137469166 Coefficient of Determination: 0.6986948888904203 RMSE: 0.29478806689977877 NRMSE: 0.10500020192334061 MAPE: 44.001700036877104 Protein: CCND1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ACTL6A', 'AKT1', 'ARID1A', 'ARID2', 'AR', 'ATF2', 'BRD2', 'BTG2', 'CCNA1', 'CCNB1', 'CCNE1', 'CCNH', 'CDC25A', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CKS1B', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUL1', 'DNMT3A', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'AGO2', 'EP300', 'ESR1', 'FOS', 'FOXA1', 'FOXM1', 'GADD45A', 'GATA3', 'GLI1', 'GLI3', 'GSK3B', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC4', 'HIST1H2BA', 'HIST2H2BE', 'HNF1A', 'IFNAR1', 'JAK2', 'JUN', 'KAT2B', 'LEF1', 'LYN', 'MAML1', 'MYB', 'MYC', 'NOTCH1', 'PBRM1', 'PCNA', 'PRMT5', 'PSMA6', 'PSMC6', 'PSMD10', 'PSMD6', 'PSMD7', 'PSME3', 'PTK6', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RELA', 'RUNX1', 'RUNX3', 'SKP1', 'SKP2', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'SUV39H1', 'TCF7L2', 'TFDP1', 'TP53', 'WDR77', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 0.5636707126515218 Spearman Correlation: 0.5338794000240731 Coefficient of Determination: 0.3177246723010745 RMSE: 0.19732635215636038 NRMSE: 0.1186268964881752 MAPE: 303.9089038533048 Pearson Correlation: 0.4724393318736653 Spearman Correlation: 0.37750951126719345 Coefficient of Determination: -0.037474895245559914 RMSE: 0.23930914416114074 NRMSE: 0.17043839678732034 MAPE: 1816.1890371613506 Predictor: ElasticNet Pearson Correlation: 0.562404261100557 Spearman Correlation: 0.531385922522841 Coefficient of Determination: 0.31629768660399327 RMSE: 0.19753259939387127 NRMSE: 0.11875088636295782 MAPE: 305.57449816661466 Pearson Correlation: 0.47096303322933025 Spearman Correlation: 0.3757487074431763 Coefficient of Determination: -0.04024812507955766 RMSE: 0.23962877423273687 NRMSE: 0.17066604056231616 MAPE: 1778.6817783919414 Predictor: RandomForests Pearson Correlation: 0.5396287154639029 Spearman Correlation: 0.502939768100025 Coefficient of Determination: 0.24994905002118484 RMSE: 0.20689530563231137 NRMSE: 0.12437947459589964 MAPE: 321.9495425031968 Pearson Correlation: 0.5113924341245587 Spearman Correlation: 0.5230886292665937 Coefficient of Determination: 0.2479354192270824 RMSE: 0.2037502091357217 NRMSE: 0.14511296303324717 MAPE: 1056.0884306207543 Protein: ERBB2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ADAM17', 'ADRB2', 'AREG', 'ARHGEF11', 'ARHGEF12', 'BTC', 'CBL', 'CCND1', 'CD44', 'CDC37', 'CDH1', 'CTNNB1', 'CTNND1', 'CUL5', 'DIAPH1', 'DOCK7', 'EGFR', 'EGF', 'ERBB2IP', 'ERBB3', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FYN', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IL6R', 'IL6', 'INS', 'JAK1', 'JAK2', 'KRAS', 'LRPPRC', 'MAP2K1', 'MAPK8', 'MATK', 'MEMO1', 'MUC1', 'MUC4', 'MYC', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'PGAP3', 'PGR', 'PIK3CA', 'PIK3CB', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PLXNB1', 'PRKACA', 'PTEN', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'RHOA', 'RHOB', 'RHOC', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'RPS27A', 'SEMA4D', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SRC', 'STAT1', 'STAT3', 'STUB1', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TGFA', 'TP53', 'UBA52', 'UBB', 'UBC', 'VEGFA', 'YES1', 'YY1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 0.8555656786123721 Spearman Correlation: 0.7304635390805553 Coefficient of Determination: 0.7319926304194486 RMSE: 0.5276014401097882 NRMSE: 0.08988558872000071 MAPE: 539.7970442292902 Pearson Correlation: 0.7211630034474364 Spearman Correlation: 0.5739196175982831 Coefficient of Determination: 0.4888452610751871 RMSE: 0.6484893794184717 NRMSE: 0.12024650091201033 MAPE: 331.13159766099665 Predictor: ElasticNet Pearson Correlation: 0.8545139866809128 Spearman Correlation: 0.7266386621532431 Coefficient of Determination: 0.7301941349188741 RMSE: 0.529368746413151 NRMSE: 0.09018667843555055 MAPE: 555.0548601417483 Pearson Correlation: 0.7288686841952379 Spearman Correlation: 0.584967320261438 Coefficient of Determination: 0.5014128490329506 RMSE: 0.6404676717522148 NRMSE: 0.11875907134289167 MAPE: 337.2258980748098 Predictor: RandomForests Pearson Correlation: 0.8433007690847746 Spearman Correlation: 0.6562328792592249 Coefficient of Determination: 0.7083630081806649 RMSE: 0.5503689305629248 NRMSE: 0.09376440543178098 MAPE: 460.06554811053206 Pearson Correlation: 0.8169954335116215 Spearman Correlation: 0.714499680796803 Coefficient of Determination: 0.6561677185767817 RMSE: 0.5318632665691463 NRMSE: 0.09862103960117677 MAPE: 307.5359921183597 Protein: ERBB3 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AKT2', 'ANGPT1', 'ANGPT2', 'AREG', 'AR', 'BDNF', 'BMP4', 'BTC', 'CBLB', 'CBL', 'CCND1', 'CDH1', 'CSF1', 'CSK', 'CTNNB1', 'DCN', 'DOCK7', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FGF10', 'FGF19', 'FGF1', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FIGF', 'FLNA', 'FOXO3', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IGF1', 'IGF2', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'JAK1', 'JAK2', 'KITLG', 'KRAS', 'LAMA1', 'LAMB1', 'LAMC2', 'MAP2K1', 'MAPK8', 'MET', 'MUC4', 'NGF', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NTF3', 'PA2G4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PRKACA', 'PTEN', 'PTPN11', 'RNF41', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SOX10', 'SRC', 'TGFA', 'VEGFA', 'VEGFB', 'VEGFC', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.5846385774030323 Spearman Correlation: 0.5814912548696802 Coefficient of Determination: 0.3418022661878415 RMSE: 0.3724959453038705 NRMSE: 0.10052596439962284 MAPE: 197.49566837967353 Pearson Correlation: 0.3120139591867298 Spearman Correlation: 0.3620139035388307 Coefficient of Determination: -0.3205796538954946 RMSE: 0.5349581227215663 NRMSE: 0.21465641159538965 MAPE: 299.0531773906742 Predictor: ElasticNet Pearson Correlation: 0.5817126078615283 Spearman Correlation: 0.5806909506339571 Coefficient of Determination: 0.33838907681137753 RMSE: 0.3734605150198209 NRMSE: 0.1007862740812423 MAPE: 198.79173019558323 Pearson Correlation: 0.3260593196509756 Spearman Correlation: 0.360838407031786 Coefficient of Determination: -0.22100297691662574 RMSE: 0.5143939436237596 NRMSE: 0.206404863100186 MAPE: 295.1690294850537 Predictor: RandomForests Pearson Correlation: 0.5491289717277127 Spearman Correlation: 0.5567681894241043 Coefficient of Determination: 0.2845656695305143 RMSE: 0.38835441470699494 NRMSE: 0.10480571012772871 MAPE: 239.9856680316148 Pearson Correlation: 0.38648227930029155 Spearman Correlation: 0.39234560614965885 Coefficient of Determination: 0.13952978922040327 RMSE: 0.4318226369637922 NRMSE: 0.17327243714841428 MAPE: 281.07626847574466 Fold: 2 Protein: RB1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AATF', 'ABL1', 'AKT1', 'AR', 'ASF1A', 'ATF2', 'BGLAP', 'CASP3', 'CBX4', 'CCNA1', 'CCNA2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CEBPA', 'COL1A1', 'CREBBP', 'CTBP1', 'DNMT1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'ELF1', 'EP300', 'FOXM1', 'FZR1', 'GNB2L1', 'H1F0', 'H2AFV', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HIST1H2BA', 'HIST2H2AC', 'HIST2H2BE', 'HMGA1', 'HMGA2', 'HSP90AA1', 'ID2', 'JUN', 'MAPK14', 'MAPK1', 'MAPK3', 'MDM2', 'MEF2C', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NFYC', 'PCNA', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP2CA', 'PPP2CB', 'PRIM1', 'PRIM2', 'RAF1', 'RBBP4', 'RUNX2', 'SIRT1', 'SKP2', 'SMARCA2', 'SMC2', 'SMC4', 'SP100', 'SP1', 'SP3', 'SPI1', 'SUV39H1', 'TAF1', 'TBP', 'TERT', 'TFDP1', 'TP53BP1', 'TP53', 'TP73', 'YAP1', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.4851511443137712 Spearman Correlation: 0.4992861387234251 Coefficient of Determination: 0.23537163282896167 RMSE: 0.20552709508679162 NRMSE: 0.07516350756538605 MAPE: 331.0357252061762 Pearson Correlation: 0.07001121464371086 Spearman Correlation: 0.12819237147595358 Coefficient of Determination: -0.4021783209687504 RMSE: 0.2899997132389546 NRMSE: 0.16614895740793312 MAPE: 600.3215095911055 Predictor: ElasticNet Pearson Correlation: 0.4847297909513382 Spearman Correlation: 0.4992267794379434 Coefficient of Determination: 0.23495408082401792 RMSE: 0.2055832050491557 NRMSE: 0.07518402759258182 MAPE: 327.38224494829365 Pearson Correlation: 0.07547354843643661 Spearman Correlation: 0.1348356257926056 Coefficient of Determination: -0.3863681150926108 RMSE: 0.2883601382814912 NRMSE: 0.16520959899708448 MAPE: 610.2349085870446 Predictor: RandomForests Pearson Correlation: 0.5145515038742902 Spearman Correlation: 0.44009892078456364 Coefficient of Determination: 0.18599802934655563 RMSE: 0.21205895119023704 NRMSE: 0.07755227881445181 MAPE: 148.26230932920876 Pearson Correlation: 0.08824190881128072 Spearman Correlation: 0.144200741635974 Coefficient of Determination: -0.030911896992970034 RMSE: 0.2486604527794585 NRMSE: 0.14246453734886647 MAPE: 222.7265029350453 Protein: CDH1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ACTA1', 'ACTN1', 'ADAM10', 'ADAM15', 'CA2', 'CASP3', 'CBLL1', 'CDC42', 'CDH17', 'CDH3', 'CDH5', 'CTBP1', 'CTNNA1', 'CTNNB1', 'CTNND1', 'CTTN', 'DLG1', 'EFNA1', 'EGFR', 'EGF', 'ENAH', 'EPCAM', 'EPHA2', 'EXOC3', 'EXOC4', 'FER', 'FLOT1', 'FLOT2', 'FMN1', 'FYN', 'GDNF', 'GNA12', 'GNA13', 'HGF', 'HGS', 'IGF1R', 'IGF1', 'IGF2', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'ITGA6', 'ITGAE', 'ITGB4', 'ITGB7', 'AJUBA', 'JUP', 'KIFC3', 'KLK7', 'KLRG1', 'LAMB1', 'LAMC2', 'LIMA1', 'MAPK1', 'MAPK3', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MLLT4', 'MMP3', 'MMP7', 'MMP9', 'MYO6', 'NCSTN', 'NUMB', 'PARD6A', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PLEKHA7', 'PLG', 'PRKCI', 'PRKCZ', 'PSEN1', 'PVRL1', 'PVRL2', 'RAB5A', 'RAB7A', 'RAC1', 'RAP1A', 'RET', 'RHOA', 'SKIL', 'SMAD3', 'SMAD4', 'SNAI1', 'SNAI2', 'SNAI3', 'SRC', 'STX4', 'TJP1', 'TWIST1', 'VASP', 'VCL', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.73491677523869 Spearman Correlation: 0.6765257583652421 Coefficient of Determination: 0.5401026665272355 RMSE: 0.7599412695880011 NRMSE: 0.12191245200737966 MAPE: 482.11194316622266 Pearson Correlation: 0.5693822176733339 Spearman Correlation: 0.5928397229538582 Coefficient of Determination: 0.2184119550546081 RMSE: 1.0172339438898483 NRMSE: 0.18064889786713698 MAPE: 301.55409599105246 Predictor: ElasticNet Pearson Correlation: 0.705651062140767 Spearman Correlation: 0.6598658697127227 Coefficient of Determination: 0.4965700511526593 RMSE: 0.7950951573232995 NRMSE: 0.1275519623523381 MAPE: 528.9496004889052 Pearson Correlation: 0.5477760758892303 Spearman Correlation: 0.6122329528826457 Coefficient of Determination: 0.21955250036342977 RMSE: 1.0164914651761114 NRMSE: 0.18051704229730267 MAPE: 272.1113071561432 Predictor: RandomForests Pearson Correlation: 0.7657638215665736 Spearman Correlation: 0.6800217599102509 Coefficient of Determination: 0.5819542149538295 RMSE: 0.7245385687012473 NRMSE: 0.11623302618131826 MAPE: 184.24380781842135 Pearson Correlation: 0.6576120370348326 Spearman Correlation: 0.6605306799336651 Coefficient of Determination: 0.39849349648966426 RMSE: 0.8923845719810481 NRMSE: 0.15847710388581923 MAPE: 209.07905470487273 Protein: CDH2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ADAM10', 'AFP', 'AHSG', 'ALB', 'APLP2', 'APOA1', 'APOB', 'APOE', 'APP', 'AXIN1', 'BDNF', 'BMP4', 'BNIP2', 'CALU', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH17', 'CDH18', 'CDH1', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDON', 'CREBBP', 'CSF1', 'CST3', 'CTNNA1', 'CTNNA2', 'CTNNB1', 'CTNND1', 'CYR61', 'FAM20C', 'FBN1', 'FER', 'FGFR1', 'FN1', 'FSTL1', 'GAS6', 'GJA1', 'GOLM1', 'GPC3', 'GRIA2', 'HSP90B1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL6', 'ITIH2', 'JUP', 'KIF5B', 'KNG1', 'KTN1', 'LAMB1', 'LAMC1', 'LGALS1', 'LRP5', 'LTBP1', 'MAP2K6', 'MAPK11', 'MAPK14', 'MATN3', 'MEF2A', 'MEF2C', 'MEF2D', 'MET', 'MFGE8', 'MSLN', 'NTRK2', 'P4HB', 'PCSK9', 'PIK3CA', 'PIK3R1', 'PTPN11', 'PTPN1', 'RAC1', 'RHOA', 'ROBO1', 'SCG2', 'SDC2', 'SERPINA1', 'SLIT1', 'SNAI1', 'SNAI2', 'SPAG9', 'SPARCL1', 'SPP1', 'STC2', 'TCF3', 'TIMP1', 'TMEM132A', 'TNC', 'VCAN', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.461560280248102 Spearman Correlation: 0.44959855956861483 Coefficient of Determination: 0.21303789230270642 RMSE: 0.3265432464956123 NRMSE: 0.1183213444798943 MAPE: 1499.0505000580733 Pearson Correlation: 0.2685249617919977 Spearman Correlation: 0.18965466783728419 Coefficient of Determination: -0.09594961801685442 RMSE: 0.4052252049481218 NRMSE: 0.21348204056966544 MAPE: 474.72825292706943 Predictor: ElasticNet Pearson Correlation: 0.46000412556547626 Spearman Correlation: 0.44705529306033 Coefficient of Determination: 0.2116016031921295 RMSE: 0.3268410986419231 NRMSE: 0.1184292697448812 MAPE: 1440.544439827267 Pearson Correlation: 0.2760158379589572 Spearman Correlation: 0.18808408935713591 Coefficient of Determination: -0.06675059409359796 RMSE: 0.3997906219393658 NRMSE: 0.21061897613984304 MAPE: 448.04386567662124 Predictor: RandomForests Pearson Correlation: 0.4799743358651429 Spearman Correlation: 0.4323148940473525 Coefficient of Determination: 0.14902348384999164 RMSE: 0.339564736706981 NRMSE: 0.12303961761974819 MAPE: 687.0139270423969 Pearson Correlation: 0.15572243257091797 Spearman Correlation: 0.3593795727246123 Coefficient of Determination: 0.005646737838464477 RMSE: 0.3859859594963049 NRMSE: 0.20334635964971784 MAPE: 213.683578517477 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.5750222934418499 Spearman Correlation: 0.5464477708979472 Coefficient of Determination: 0.33065063795512506 RMSE: 0.16993269557651747 NRMSE: 0.12789106558632488 MAPE: 280.5599204073236 Pearson Correlation: 0.15129344217298812 Spearman Correlation: 0.33341137450004876 Coefficient of Determination: -0.4540238663663705 RMSE: 0.23866673811950395 NRMSE: 0.1963850391833325 MAPE: 1617.3596664557049 Predictor: ElasticNet Pearson Correlation: 0.5723721973092712 Spearman Correlation: 0.5461052538587899 Coefficient of Determination: 0.3276002463374865 RMSE: 0.17031946821429153 NRMSE: 0.12818215003371 MAPE: 296.60509095564515 Pearson Correlation: 0.2923722962984612 Spearman Correlation: 0.36440347283191893 Coefficient of Determination: -0.09046592516092966 RMSE: 0.20668653268342135 NRMSE: 0.1700703798925544 MAPE: 1638.1601138374529 Predictor: RandomForests Pearson Correlation: 0.5643358015865344 Spearman Correlation: 0.5594957544546396 Coefficient of Determination: 0.29155153385693355 RMSE: 0.1748254487915101 NRMSE: 0.13157334356228134 MAPE: 361.8760380238018 Pearson Correlation: 0.2660954627991169 Spearman Correlation: 0.37114427860696525 Coefficient of Determination: -0.07709174127645158 RMSE: 0.20541515331686686 NRMSE: 0.16902423542900263 MAPE: 1459.1740837012032 Protein: PTEN Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AR', 'BCR', 'CD79A', 'CD79B', 'CDIPT', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'DLG1', 'EGFR', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'FOXO3', 'FOXO4', 'FRK', 'GRB2', 'HRAS', 'INPP4A', 'INPP4B', 'INPP5B', 'INPP5D', 'INPP5J', 'INPP5K', 'INPPL1', 'IPMK', 'IRS1', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'MAST2', 'MDM2', 'MDM4', 'MKRN1', 'MTOR', 'MYC', 'NEDD4', 'NOTCH1', 'OCRL', 'OTUD3', 'PARK7', 'PDGFB', 'PDGFRB', 'PI4K2A', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIKFYVE', 'PIP4K2A', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PML', 'PREX2', 'PSMA6', 'PSMA7', 'PSMB9', 'PSMC6', 'PSMD10', 'PSMD5', 'PSME3', 'PTK2', 'RICTOR', 'RNF146', 'ROCK1', 'ROCK2', 'RPS27A', 'RPS6KB1', 'SACM1L', 'SHC1', 'SLC9A3R1', 'SLC9A3R2', 'SOS1', 'STK11', 'STUB1', 'SYNJ1', 'SYNJ2', 'TNKS2', 'TNKS', 'TNRC6A', 'TNRC6B', 'TP53', 'UBB', 'UBC', 'USP13', 'USP7', 'WWP2', 'XIAP', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.5964416558096524 Spearman Correlation: 0.5860208262750544 Coefficient of Determination: 0.35574264878495987 RMSE: 0.5006566468385097 NRMSE: 0.07828264355226483 MAPE: 483.7079598800724 Pearson Correlation: 0.3066570066417938 Spearman Correlation: 0.25554580040971614 Coefficient of Determination: -0.2630366278433647 RMSE: 0.5749950618438655 NRMSE: 0.19284782058085106 MAPE: 2320.510740758025 Predictor: ElasticNet Pearson Correlation: 0.5918633223570687 Spearman Correlation: 0.5860166416779056 Coefficient of Determination: 0.3503020687050753 RMSE: 0.5027661580116387 NRMSE: 0.07861248659395492 MAPE: 524.5236259225937 Pearson Correlation: 0.3007397468485377 Spearman Correlation: 0.24874646375963327 Coefficient of Determination: -0.25698908969499623 RMSE: 0.573616844892299 NRMSE: 0.1923855798538701 MAPE: 2170.1742564610563 Predictor: RandomForests Pearson Correlation: 0.5753336243669441 Spearman Correlation: 0.524772713757397 Coefficient of Determination: 0.30205576568971204 RMSE: 0.5210995005782082 NRMSE: 0.0814790869483556 MAPE: 266.8419485584841 Pearson Correlation: 0.2937978053660253 Spearman Correlation: 0.3148969899254314 Coefficient of Determination: 0.06599378271861733 RMSE: 0.49445984215507816 NRMSE: 0.1658370814847995 MAPE: 485.3068733725973 Protein: BRCA2 Protein Interaction Partners Count: 100 x_train_column_count: 99 x_train columns: ['ATM', 'ATRIP', 'ATR', 'BARD1', 'BLM', 'BRCA1', 'BRIP1', 'SLX4', 'RHNO1', 'RMI2', 'CDK2', 'CDK4', 'CHEK1', 'CHEK2', 'DMC1', 'DNA2', 'EME1', 'EME2', 'EXO1', 'FANCD2', 'FANCE', 'FANCG', 'FANCI', 'GEN1', 'H2AFX', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HUS1', 'KAT5', 'SPIDR', 'MLH1', 'MLH3', 'MND1', 'MRE11A', 'MSH4', 'MSH5', 'MUS81', 'NBN', 'PALB2', 'PARP1', 'PCNA', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'PSMC3IP', 'RAD17', 'RAD1', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD9A', 'RAD9B', 'RBBP8', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SPO11', 'SYCP3', 'TEX15', 'TOP3A', 'TOPBP1', 'TP53', 'UBA52', 'UBB', 'UBC', 'WRN', 'XRCC2', 'XRCC3', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.5303131589227363 Spearman Correlation: 0.48286116737715845 Coefficient of Determination: 0.2812320465266114 RMSE: 0.1655963811106799 NRMSE: 0.10668151464691893 MAPE: 262.1609769900068 Pearson Correlation: 0.14813065706501305 Spearman Correlation: 0.15685786752511952 Coefficient of Determination: -0.28050107383618683 RMSE: 0.21860977061655495 NRMSE: 0.14797626164537034 MAPE: 532.6878069544679 Predictor: ElasticNet Pearson Correlation: 0.5238849424594145 Spearman Correlation: 0.4790111827168079 Coefficient of Determination: 0.2743691685872335 RMSE: 0.16638506947577617 NRMSE: 0.10718960829491136 MAPE: 241.4305946178917 Pearson Correlation: 0.1515744447306169 Spearman Correlation: 0.159452736318408 Coefficient of Determination: -0.2140013005227086 RMSE: 0.21285760486528973 NRMSE: 0.14408263885881267 MAPE: 480.6592638563987 Predictor: RandomForests Pearson Correlation: 0.5464276865949703 Spearman Correlation: 0.4667890971397747 Coefficient of Determination: 0.16976237956047002 RMSE: 0.1779744637630843 NRMSE: 0.11465579884882222 MAPE: 166.15437071332846 Pearson Correlation: 0.16705348570371462 Spearman Correlation: 0.21473027021753976 Coefficient of Determination: 0.00883631884128544 RMSE: 0.19233232652571014 NRMSE: 0.1301891429306317 MAPE: 127.59241320169126 Protein: CDKN2A Protein Interaction Partners Count: 100 x_train_column_count: 100 x_train columns: ['ABL1', 'AKT1', 'ARF1', 'BMI1', 'BRCA1', 'CBX7', 'CCND1', 'CCND2', 'CCND3', 'CCNL1', 'CDC45', 'CDC6', 'CDC7', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPB', 'CTCF', 'DAXX', 'E2F1', 'E2F2', 'E2F3', 'EGFR', 'EGR1', 'AGO1', 'AGO3', 'AGO4', 'ERBB2', 'EZH2', 'FOXM1', 'GMNN', 'HDAC1', 'HIF1A', 'HRAS', 'HUWE1', 'IL6', 'KRAS', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAX', 'MCM10', 'MCM2', 'MCM5', 'MDM2', 'MDM4', 'MGMT', 'MLH1', 'MOV10', 'MRAS', 'MTAP', 'MYCN', 'MYC', 'NPM1', 'NRAS', 'ORC5', 'PIK3CA', 'PIK3R1', 'PTEN', 'RASSF1', 'RB1', 'RPS27A', 'RRAS2', 'RRAS', 'RUNX3', 'SMAD3', 'SMAD4', 'SMARCA4', 'SUMO1', 'SUMO2', 'SUMO3', 'TBX2', 'TERT', 'TFDP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TP53', 'TP63', 'TRIP12', 'TWIST1', 'UBA52', 'UBB', 'UBC', 'UBE2I', 'USP7', 'VEGFA', 'WRN', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.7156411285791773 Spearman Correlation: 0.648686950907236 Coefficient of Determination: 0.5121422249140785 RMSE: 0.4633253661861893 NRMSE: 0.10474180313918599 MAPE: 236.45293196087832 Pearson Correlation: 0.5329176555028884 Spearman Correlation: 0.5312896302799728 Coefficient of Determination: -0.795632307602633 RMSE: 0.9024074160288927 NRMSE: 0.24378847418113592 MAPE: 241.28533353857077 Predictor: ElasticNet Pearson Correlation: 0.7154700415646817 Spearman Correlation: 0.6479407752415675 Coefficient of Determination: 0.5118973035363659 RMSE: 0.46344165422533046 NRMSE: 0.10476809183346454 MAPE: 248.00557473532598 Pearson Correlation: 0.5335124780061604 Spearman Correlation: 0.5312554872695348 Coefficient of Determination: -0.7873480176452603 RMSE: 0.9003233459320803 NRMSE: 0.24322545546036317 MAPE: 238.90954618612218 Predictor: RandomForests Pearson Correlation: 0.6584895094447617 Spearman Correlation: 0.5891147738605967 Coefficient of Determination: 0.4207427885264894 RMSE: 0.5048649102539812 NRMSE: 0.11413245399660475 MAPE: 178.6375203118971 Pearson Correlation: 0.7144224068256434 Spearman Correlation: 0.6207392720481201 Coefficient of Determination: 0.4728247406407804 RMSE: 0.488957892315898 NRMSE: 0.13209366012424303 MAPE: 188.25709460942753 Protein: TP53 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AKT1', 'APAF1', 'ATM', 'ATR', 'AURKA', 'AURKB', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2L1', 'BCL2', 'BCL6', 'BRCA1', 'CASP8', 'CCNA2', 'CCNE1', 'CCNG1', 'CDC25C', 'CDK2', 'CDK5', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CHEK1', 'CHEK2', 'COPS5', 'CREBBP', 'DDB2', 'DDX5', 'DYRK2', 'E2F4', 'EGR1', 'EHMT2', 'EP300', 'EZH2', 'FZR1', 'GADD45A', 'GLS2', 'GSK3B', 'HDAC1', 'HDAC2', 'HIF1A', 'HIPK2', 'HSP90AA1', 'HSPA1A', 'IGFBP3', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'MAPK14', 'MAPK1', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MCL1', 'MDM2', 'MDM4', 'MSH2', 'NGFR', 'NPM1', 'PLK3', 'PMAIP1', 'PPP1R13B', 'PPP1R13L', 'PRKDC', 'PRMT5', 'PTEN', 'RB1', 'RCHY1', 'DROSHA', 'RPA1', 'RRM2B', 'SETD7', 'SETD8', 'SFN', 'SIRT1', 'SMYD2', 'SNAI1', 'SNAI2', 'SP1', 'STAT3', 'STK11', 'SUMO1', 'SUMO2', 'TBP', 'TNFRSF10A', 'TNFRSF10B', 'TP53BP1', 'TP53BP2', 'TP53INP1', 'TP53RK', 'TXN', 'UBE2I', 'USP7', 'WRN', 'XRCC6', 'YY1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 0.6525223438001391 Spearman Correlation: 0.5866541454218444 Coefficient of Determination: 0.4257854091584269 RMSE: 0.34502935583659167 NRMSE: 0.09241445181105978 MAPE: 471.44946086363825 Pearson Correlation: 0.4538437701162907 Spearman Correlation: 0.46975417032484645 Coefficient of Determination: 0.041356077364614885 RMSE: 0.4008288574966468 NRMSE: 0.13200357566166535 MAPE: 2630.563021646479 Predictor: ElasticNet Pearson Correlation: 0.6449551753565147 Spearman Correlation: 0.5807614188504597 Coefficient of Determination: 0.41595654929510384 RMSE: 0.3479697687948295 NRMSE: 0.09320202726525499 MAPE: 421.3403690705336 Pearson Correlation: 0.4463761837928612 Spearman Correlation: 0.47093454297141746 Coefficient of Determination: 0.01672908501610404 RMSE: 0.4059447373687847 NRMSE: 0.13368837061379374 MAPE: 2674.589414294762 Predictor: RandomForests Pearson Correlation: 0.6211946355828277 Spearman Correlation: 0.5590174471190383 Coefficient of Determination: 0.3494121420579812 RMSE: 0.3672585475468717 NRMSE: 0.09836843378783225 MAPE: 362.91345345811743 Pearson Correlation: 0.5917300916878822 Spearman Correlation: 0.5117451955906741 Coefficient of Determination: 0.31763080129622556 RMSE: 0.3381738537731816 NRMSE: 0.11136962087046981 MAPE: 1968.2726048276872 Protein: CTNNB1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'AKT1', 'APC2', 'APC', 'AR', 'AXIN1', 'AXIN2', 'BCL9', 'BTRC', 'CASP3', 'CBY1', 'CCND1', 'CDC73', 'CDH11', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDH5', 'CDH8', 'CHD8', 'CREBBP', 'CSNK1A1', 'CSNK1E', 'CTBP1', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNBIP1', 'CTNND1', 'DVL1', 'DVL2', 'DVL3', 'EGFR', 'EGF', 'EP300', 'ERBB2', 'AMER1', 'FBXW11', 'FER', 'FGFR1', 'FOXO1', 'FOXO3', 'FYN', 'FZD1', 'FZD2', 'FZD5', 'GSK3A', 'GSK3B', 'HNF4A', 'IGF1R', 'IQGAP1', 'JUN', 'JUP', 'KDR', 'KLF4', 'LEF1', 'LRP5', 'LRP6', 'MAPK9', 'MEN1', 'MET', 'MMP7', 'MYC', 'NLK', 'NOTCH1', 'PIK3CA', 'PIK3R1', 'PITX2', 'PSEN1', 'PTPN11', 'PTPN1', 'PYGO2', 'RUVBL1', 'SKP1', 'SMAD4', 'SMAD7', 'SMARCA4', 'SOX17', 'SOX2', 'SOX6', 'SOX9', 'SRC', 'TBL1X', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TGFBR1', 'TGFBR2', 'TJP1', 'TLE1', 'VCL', 'VEGFA', 'WNT1', 'WNT3A', 'WNT8A', 'WNT8B', 'YWHAZ', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.6518527799980554 Spearman Correlation: 0.6309058981105952 Coefficient of Determination: 0.4249120467911932 RMSE: 0.549788067319096 NRMSE: 0.10814084723034935 MAPE: 341.5427138389377 Pearson Correlation: 0.5252194586548304 Spearman Correlation: 0.5553409423470882 Coefficient of Determination: 0.18086877110284172 RMSE: 0.6937584361651047 NRMSE: 0.17265833009758463 MAPE: 421.5513120536901 Predictor: ElasticNet Pearson Correlation: 0.6515171552734125 Spearman Correlation: 0.631494686462164 Coefficient of Determination: 0.42447097384600485 RMSE: 0.5499988613045006 NRMSE: 0.10818230946193955 MAPE: 338.42549134768893 Pearson Correlation: 0.5260441067202639 Spearman Correlation: 0.5550580431177446 Coefficient of Determination: 0.1828009924424685 RMSE: 0.6929397112444372 NRMSE: 0.17245457087788688 MAPE: 409.75212786171244 Predictor: RandomForests Pearson Correlation: 0.6609651932376164 Spearman Correlation: 0.5862416152305238 Coefficient of Determination: 0.428352896454669 RMSE: 0.5481408616864913 NRMSE: 0.10781684926956951 MAPE: 409.6430696817524 Pearson Correlation: 0.5587501084007931 Spearman Correlation: 0.5378433053404952 Coefficient of Determination: 0.26870075000231564 RMSE: 0.6555096651182158 NRMSE: 0.16313921134820336 MAPE: 194.44824700933106 Protein: CCNE1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['ABL1', 'BARD1', 'BRCA1', 'CABLES1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNH', 'CCT2', 'CCT3', 'CCT4', 'CCT6A', 'CCT7', 'CDC25A', 'CDC6', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDT1', 'CKS1B', 'CKS2', 'CUL1', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'EP400', 'FOXM1', 'HDAC1', 'IFNAR1', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'MNAT1', 'MYC', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PCNA', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB7', 'PSMC1', 'PSMC2', 'PSMC4', 'PSMC5', 'PSMD10', 'PSMD11', 'PSMD14', 'PSMD1', 'PSMD3', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSME3', 'PTK6', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RHOA', 'RPS27A', 'RRN3', 'SKP1', 'SKP2', 'STAT5A', 'STAT5B', 'TCP1', 'TFDP1', 'TP53', 'TP73', 'UBB', 'UBC', 'WEE1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.8839824869271016 Spearman Correlation: 0.7060161780016073 Coefficient of Determination: 0.781425037193823 RMSE: 0.23974280620503113 NRMSE: 0.057857182277923386 MAPE: 57.10052450182326 Pearson Correlation: 0.7248083286506806 Spearman Correlation: 0.6715296068676226 Coefficient of Determination: 0.4140416847807007 RMSE: 0.32017950563235437 NRMSE: 0.17401154660207632 MAPE: 54.279468913458395 Predictor: ElasticNet Pearson Correlation: 0.8839812078224671 Spearman Correlation: 0.7060573265410346 Coefficient of Determination: 0.781422679819759 RMSE: 0.23974409903825927 NRMSE: 0.05785749427764058 MAPE: 57.09323524655942 Pearson Correlation: 0.7253632024755619 Spearman Correlation: 0.6714027899717101 Coefficient of Determination: 0.4157317463586745 RMSE: 0.31971743024546406 NRMSE: 0.17376041730958544 MAPE: 54.229463528563656 Predictor: RandomForests Pearson Correlation: 0.8593755817851706 Spearman Correlation: 0.7111903038157923 Coefficient of Determination: 0.7339078258100613 RMSE: 0.26452177540838345 NRMSE: 0.06383709617211271 MAPE: 68.13230141279159 Pearson Correlation: 0.837300844103151 Spearman Correlation: 0.7371394425134778 Coefficient of Determination: 0.6982205640864202 RMSE: 0.2297761720882395 NRMSE: 0.12487903308617956 MAPE: 40.40251932527539 Protein: CCND1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ACTL6A', 'AKT1', 'ARID1A', 'ARID2', 'AR', 'ATF2', 'BRD2', 'BTG2', 'CCNA1', 'CCNB1', 'CCNE1', 'CCNH', 'CDC25A', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CKS1B', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUL1', 'DNMT3A', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'AGO2', 'EP300', 'ESR1', 'FOS', 'FOXA1', 'FOXM1', 'GADD45A', 'GATA3', 'GLI1', 'GLI3', 'GSK3B', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC4', 'HIST1H2BA', 'HIST2H2BE', 'HNF1A', 'IFNAR1', 'JAK2', 'JUN', 'KAT2B', 'LEF1', 'LYN', 'MAML1', 'MYB', 'MYC', 'NOTCH1', 'PBRM1', 'PCNA', 'PRMT5', 'PSMA6', 'PSMC6', 'PSMD10', 'PSMD6', 'PSMD7', 'PSME3', 'PTK6', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RELA', 'RUNX1', 'RUNX3', 'SKP1', 'SKP2', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'SUV39H1', 'TCF7L2', 'TFDP1', 'TP53', 'WDR77', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.5990227653982985 Spearman Correlation: 0.5536515056965445 Coefficient of Determination: 0.35882827346542523 RMSE: 0.1911699644554815 NRMSE: 0.11492585423734326 MAPE: 521.0719930934317 Pearson Correlation: 0.2207409804791603 Spearman Correlation: 0.2705297044190811 Coefficient of Determination: -0.06175444924799045 RMSE: 0.24259014101989212 NRMSE: 0.1876819188431424 MAPE: 292.4200226429774 Predictor: ElasticNet Pearson Correlation: 0.5968352101313367 Spearman Correlation: 0.549863786516883 Coefficient of Determination: 0.356211461108201 RMSE: 0.1915596779443229 NRMSE: 0.1151601387168141 MAPE: 516.3548622083043 Pearson Correlation: 0.2192402806131924 Spearman Correlation: 0.26347673397717297 Coefficient of Determination: -0.059057547834682644 RMSE: 0.242281850494936 NRMSE: 0.18744340726537725 MAPE: 315.7656495051962 Predictor: RandomForests Pearson Correlation: 0.5631499686100497 Spearman Correlation: 0.5390914785135056 Coefficient of Determination: 0.28914869597619186 RMSE: 0.20128984248854584 NRMSE: 0.12100963225676369 MAPE: 477.52792550531706 Pearson Correlation: 0.29471645301089366 Spearman Correlation: 0.452921529639248 Coefficient of Determination: 0.07768097138223085 RMSE: 0.2261005852832818 NRMSE: 0.17492463427870414 MAPE: 317.05892263039914 Protein: ERBB2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ADAM17', 'ADRB2', 'AREG', 'ARHGEF11', 'ARHGEF12', 'BTC', 'CBL', 'CCND1', 'CD44', 'CDC37', 'CDH1', 'CTNNB1', 'CTNND1', 'CUL5', 'DIAPH1', 'DOCK7', 'EGFR', 'EGF', 'ERBB2IP', 'ERBB3', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FYN', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IL6R', 'IL6', 'INS', 'JAK1', 'JAK2', 'KRAS', 'LRPPRC', 'MAP2K1', 'MAPK8', 'MATK', 'MEMO1', 'MUC1', 'MUC4', 'MYC', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'PGAP3', 'PGR', 'PIK3CA', 'PIK3CB', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PLXNB1', 'PRKACA', 'PTEN', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'RHOA', 'RHOB', 'RHOC', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'RPS27A', 'SEMA4D', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SRC', 'STAT1', 'STAT3', 'STUB1', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TGFA', 'TP53', 'UBA52', 'UBB', 'UBC', 'VEGFA', 'YES1', 'YY1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.846650264240519 Spearman Correlation: 0.7123243309405133 Coefficient of Determination: 0.7168166699385411 RMSE: 0.5231078228887083 NRMSE: 0.0938764644560968 MAPE: 333.68104968780847 Pearson Correlation: 0.7341766613916392 Spearman Correlation: 0.5138327968003122 Coefficient of Determination: 0.5080034957095831 RMSE: 0.7415472351463452 NRMSE: 0.12633477607822294 MAPE: 753.462903456599 Predictor: ElasticNet Pearson Correlation: 0.8466178027360068 Spearman Correlation: 0.712151057611465 Coefficient of Determination: 0.7167616845160357 RMSE: 0.5231586060837345 NRMSE: 0.09388557796309145 MAPE: 334.33833291991215 Pearson Correlation: 0.7353569507733023 Spearman Correlation: 0.5141400838942543 Coefficient of Determination: 0.5104437647800741 RMSE: 0.7397059373015024 NRMSE: 0.12602108068581058 MAPE: 771.7987593366056 Predictor: RandomForests Pearson Correlation: 0.8481728498544122 Spearman Correlation: 0.6807050673137784 Coefficient of Determination: 0.7163360509917931 RMSE: 0.5235515441797762 NRMSE: 0.09395609428418718 MAPE: 273.8506328801418 Pearson Correlation: 0.8072745956121323 Spearman Correlation: 0.5010446960552435 Coefficient of Determination: 0.6306863319364965 RMSE: 0.6424739183719914 NRMSE: 0.10945600599212761 MAPE: 1476.6991376048811 Protein: ERBB3 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AKT2', 'ANGPT1', 'ANGPT2', 'AREG', 'AR', 'BDNF', 'BMP4', 'BTC', 'CBLB', 'CBL', 'CCND1', 'CDH1', 'CSF1', 'CSK', 'CTNNB1', 'DCN', 'DOCK7', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FGF10', 'FGF19', 'FGF1', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FIGF', 'FLNA', 'FOXO3', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IGF1', 'IGF2', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'JAK1', 'JAK2', 'KITLG', 'KRAS', 'LAMA1', 'LAMB1', 'LAMC2', 'MAP2K1', 'MAPK8', 'MET', 'MUC4', 'NGF', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NTF3', 'PA2G4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PRKACA', 'PTEN', 'PTPN11', 'RNF41', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SOX10', 'SRC', 'TGFA', 'VEGFA', 'VEGFB', 'VEGFC', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.6050722222023426 Spearman Correlation: 0.596917256993673 Coefficient of Determination: 0.36611239408088114 RMSE: 0.3544018492651524 NRMSE: 0.09564288720868132 MAPE: 192.02826040357988 Pearson Correlation: 0.1251502946080933 Spearman Correlation: 0.26888108477221734 Coefficient of Determination: -0.6417148470802585 RMSE: 0.6634227317813419 NRMSE: 0.24484247867069997 MAPE: 382.16940050427996 Predictor: ElasticNet Pearson Correlation: 0.6040386493833473 Spearman Correlation: 0.5965618373841701 Coefficient of Determination: 0.364861800471034 RMSE: 0.35475127580089544 NRMSE: 0.09573718740156996 MAPE: 191.8265066574806 Pearson Correlation: 0.1343251758686793 Spearman Correlation: 0.279606867622671 Coefficient of Determination: -0.6586999990955196 RMSE: 0.666845780635217 NRMSE: 0.24610578745685402 MAPE: 376.22948959849316 Predictor: RandomForests Pearson Correlation: 0.5452136536055863 Spearman Correlation: 0.579718471447528 Coefficient of Determination: 0.2810154614173048 RMSE: 0.37744147854677623 NRMSE: 0.10186062187705641 MAPE: 212.0710517498569 Pearson Correlation: 0.42385339480537054 Spearman Correlation: 0.3776168178714272 Coefficient of Determination: 0.1743540063903264 RMSE: 0.4704770294461702 NRMSE: 0.17363402929822233 MAPE: 362.7363007389323 Fold: 3 Protein: RB1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AATF', 'ABL1', 'AKT1', 'AR', 'ASF1A', 'ATF2', 'BGLAP', 'CASP3', 'CBX4', 'CCNA1', 'CCNA2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CEBPA', 'COL1A1', 'CREBBP', 'CTBP1', 'DNMT1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'ELF1', 'EP300', 'FOXM1', 'FZR1', 'GNB2L1', 'H1F0', 'H2AFV', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HIST1H2BA', 'HIST2H2AC', 'HIST2H2BE', 'HMGA1', 'HMGA2', 'HSP90AA1', 'ID2', 'JUN', 'MAPK14', 'MAPK1', 'MAPK3', 'MDM2', 'MEF2C', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NFYC', 'PCNA', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP2CA', 'PPP2CB', 'PRIM1', 'PRIM2', 'RAF1', 'RBBP4', 'RUNX2', 'SIRT1', 'SKP2', 'SMARCA2', 'SMC2', 'SMC4', 'SP100', 'SP1', 'SP3', 'SPI1', 'SUV39H1', 'TAF1', 'TBP', 'TERT', 'TFDP1', 'TP53BP1', 'TP53', 'TP73', 'YAP1', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.493821499314231 Spearman Correlation: 0.49040936426452825 Coefficient of Determination: 0.24385967318495494 RMSE: 0.2092005337542211 NRMSE: 0.07650692428109315 MAPE: 392.13227324848145 Pearson Correlation: 0.0865092119449358 Spearman Correlation: 0.07943989326550208 Coefficient of Determination: -0.3003713830194472 RMSE: 0.2527731653374258 NRMSE: 0.17736725187520228 MAPE: 472.9599476174897 Predictor: ElasticNet Pearson Correlation: 0.4919788464091441 Spearman Correlation: 0.48715522277264045 Coefficient of Determination: 0.2420374414674895 RMSE: 0.2094524595138814 NRMSE: 0.07659905628799056 MAPE: 397.5366347445569 Pearson Correlation: 0.09958557517078105 Spearman Correlation: 0.09638274791456254 Coefficient of Determination: -0.29081199951153414 RMSE: 0.25184234938762484 NRMSE: 0.17671411186804442 MAPE: 480.2057161208298 Predictor: RandomForests Pearson Correlation: 0.5955612306404852 Spearman Correlation: 0.4479699741717738 Coefficient of Determination: 0.1797618866936359 RMSE: 0.21788712107843547 NRMSE: 0.07968370431481696 MAPE: 166.45708572085704 Pearson Correlation: -0.014670344022122526 Spearman Correlation: 0.13396426389356478 Coefficient of Determination: -0.07349717755129115 RMSE: 0.2296665352119676 NRMSE: 0.16115366575351725 MAPE: 168.71434378733105 Protein: CDH1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ACTA1', 'ACTN1', 'ADAM10', 'ADAM15', 'CA2', 'CASP3', 'CBLL1', 'CDC42', 'CDH17', 'CDH3', 'CDH5', 'CTBP1', 'CTNNA1', 'CTNNB1', 'CTNND1', 'CTTN', 'DLG1', 'EFNA1', 'EGFR', 'EGF', 'ENAH', 'EPCAM', 'EPHA2', 'EXOC3', 'EXOC4', 'FER', 'FLOT1', 'FLOT2', 'FMN1', 'FYN', 'GDNF', 'GNA12', 'GNA13', 'HGF', 'HGS', 'IGF1R', 'IGF1', 'IGF2', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'ITGA6', 'ITGAE', 'ITGB4', 'ITGB7', 'AJUBA', 'JUP', 'KIFC3', 'KLK7', 'KLRG1', 'LAMB1', 'LAMC2', 'LIMA1', 'MAPK1', 'MAPK3', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MLLT4', 'MMP3', 'MMP7', 'MMP9', 'MYO6', 'NCSTN', 'NUMB', 'PARD6A', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PLEKHA7', 'PLG', 'PRKCI', 'PRKCZ', 'PSEN1', 'PVRL1', 'PVRL2', 'RAB5A', 'RAB7A', 'RAC1', 'RAP1A', 'RET', 'RHOA', 'SKIL', 'SMAD3', 'SMAD4', 'SNAI1', 'SNAI2', 'SNAI3', 'SRC', 'STX4', 'TJP1', 'TWIST1', 'VASP', 'VCL', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.7492023588877476 Spearman Correlation: 0.7240617785985481 Coefficient of Determination: 0.5613041745629648 RMSE: 0.7780577450662973 NRMSE: 0.12389059983221828 MAPE: 580.3292324428106 Pearson Correlation: 0.5685940444364693 Spearman Correlation: 0.4892604645943216 Coefficient of Determination: 0.17353289428782248 RMSE: 0.8559561258278257 NRMSE: 0.1682766731859839 MAPE: 346.51801034916457 Predictor: ElasticNet Pearson Correlation: 0.7325301212388396 Spearman Correlation: 0.7149065195300698 Coefficient of Determination: 0.5360868899182858 RMSE: 0.8001076120287307 NRMSE: 0.12740161332899122 MAPE: 642.2707383161986 Pearson Correlation: 0.49767008860313267 Spearman Correlation: 0.4874649309841769 Coefficient of Determination: 0.03312412556586031 RMSE: 0.92581471638621 NRMSE: 0.18201052105261079 MAPE: 360.9350609399645 Predictor: RandomForests Pearson Correlation: 0.7524338190668896 Spearman Correlation: 0.6942108204463948 Coefficient of Determination: 0.5617845261196615 RMSE: 0.7776316598487697 NRMSE: 0.12382275402833821 MAPE: 225.08244293518044 Pearson Correlation: 0.7280000432003245 Spearman Correlation: 0.49936096380413114 Coefficient of Determination: 0.5199522909693829 RMSE: 0.6523503784588328 NRMSE: 0.12824880636551583 MAPE: 155.4068923091974 Protein: CDH2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ADAM10', 'AFP', 'AHSG', 'ALB', 'APLP2', 'APOA1', 'APOB', 'APOE', 'APP', 'AXIN1', 'BDNF', 'BMP4', 'BNIP2', 'CALU', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH17', 'CDH18', 'CDH1', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDON', 'CREBBP', 'CSF1', 'CST3', 'CTNNA1', 'CTNNA2', 'CTNNB1', 'CTNND1', 'CYR61', 'FAM20C', 'FBN1', 'FER', 'FGFR1', 'FN1', 'FSTL1', 'GAS6', 'GJA1', 'GOLM1', 'GPC3', 'GRIA2', 'HSP90B1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL6', 'ITIH2', 'JUP', 'KIF5B', 'KNG1', 'KTN1', 'LAMB1', 'LAMC1', 'LGALS1', 'LRP5', 'LTBP1', 'MAP2K6', 'MAPK11', 'MAPK14', 'MATN3', 'MEF2A', 'MEF2C', 'MEF2D', 'MET', 'MFGE8', 'MSLN', 'NTRK2', 'P4HB', 'PCSK9', 'PIK3CA', 'PIK3R1', 'PTPN11', 'PTPN1', 'RAC1', 'RHOA', 'ROBO1', 'SCG2', 'SDC2', 'SERPINA1', 'SLIT1', 'SNAI1', 'SNAI2', 'SPAG9', 'SPARCL1', 'SPP1', 'STC2', 'TCF3', 'TIMP1', 'TMEM132A', 'TNC', 'VCAN', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.49061849430779675 Spearman Correlation: 0.4691996667255932 Coefficient of Determination: 0.2407065069568496 RMSE: 0.3322010369156763 NRMSE: 0.12037141710112194 MAPE: 984.2038457700166 Pearson Correlation: 0.05426098865249112 Spearman Correlation: 0.04491577201710745 Coefficient of Determination: -0.4220735248256402 RMSE: 0.3958866923477418 NRMSE: 0.20859416419781118 MAPE: 3416.930625450666 Predictor: ElasticNet Pearson Correlation: 0.4896100917363907 Spearman Correlation: 0.4660122216028215 Coefficient of Determination: 0.23971663354901085 RMSE: 0.33241750780013746 NRMSE: 0.12044985426485161 MAPE: 918.9268191802696 Pearson Correlation: 0.054720752547682425 Spearman Correlation: 0.03819748375914912 Coefficient of Determination: -0.41603045441730435 RMSE: 0.39504464089589714 NRMSE: 0.20815048416965096 MAPE: 3589.676707425081 Predictor: RandomForests Pearson Correlation: 0.49290821448702327 Spearman Correlation: 0.45845591613102726 Coefficient of Determination: 0.17951866306918507 RMSE: 0.34532697003162727 NRMSE: 0.1251275346154168 MAPE: 581.6340437811261 Pearson Correlation: 0.0760139287005622 Spearman Correlation: 0.05782622953685905 Coefficient of Determination: -0.0126891420491837 RMSE: 0.33407805958420606 NRMSE: 0.17602696671244025 MAPE: 1587.1027603435464 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.5727097811799439 Spearman Correlation: 0.5792644266997269 Coefficient of Determination: 0.32799649345917925 RMSE: 0.1742073915858315 NRMSE: 0.12221992450035887 MAPE: 860.7578539003619 Pearson Correlation: 0.3078638378825277 Spearman Correlation: 0.3008441501764361 Coefficient of Determination: -0.03313055115949193 RMSE: 0.1914225605909649 NRMSE: 0.1665021794001452 MAPE: 244.5250349075947 Predictor: ElasticNet Pearson Correlation: 0.57193862031258 Spearman Correlation: 0.5765218946935985 Coefficient of Determination: 0.32710405568284595 RMSE: 0.1743230291331934 NRMSE: 0.12230105316074072 MAPE: 872.8083401472041 Pearson Correlation: 0.3124088456127106 Spearman Correlation: 0.3006546216286986 Coefficient of Determination: -0.02192627631636279 RMSE: 0.190381744564837 NRMSE: 0.16559686219944594 MAPE: 245.4639300078506 Predictor: RandomForests Pearson Correlation: 0.5653902264193225 Spearman Correlation: 0.5647909017496053 Coefficient of Determination: 0.2839064224243535 RMSE: 0.17983147143600559 NRMSE: 0.1261656503872745 MAPE: 669.4133299085007 Pearson Correlation: 0.36166175579365273 Spearman Correlation: 0.3745059165326251 Coefficient of Determination: 0.12762128326974997 RMSE: 0.17590089529614486 NRMSE: 0.15300120495111194 MAPE: 201.7567420267845 Protein: PTEN Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AR', 'BCR', 'CD79A', 'CD79B', 'CDIPT', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'DLG1', 'EGFR', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'FOXO3', 'FOXO4', 'FRK', 'GRB2', 'HRAS', 'INPP4A', 'INPP4B', 'INPP5B', 'INPP5D', 'INPP5J', 'INPP5K', 'INPPL1', 'IPMK', 'IRS1', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'MAST2', 'MDM2', 'MDM4', 'MKRN1', 'MTOR', 'MYC', 'NEDD4', 'NOTCH1', 'OCRL', 'OTUD3', 'PARK7', 'PDGFB', 'PDGFRB', 'PI4K2A', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIKFYVE', 'PIP4K2A', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PML', 'PREX2', 'PSMA6', 'PSMA7', 'PSMB9', 'PSMC6', 'PSMD10', 'PSMD5', 'PSME3', 'PTK2', 'RICTOR', 'RNF146', 'ROCK1', 'ROCK2', 'RPS27A', 'RPS6KB1', 'SACM1L', 'SHC1', 'SLC9A3R1', 'SLC9A3R2', 'SOS1', 'STK11', 'STUB1', 'SYNJ1', 'SYNJ2', 'TNKS2', 'TNKS', 'TNRC6A', 'TNRC6B', 'TP53', 'UBB', 'UBC', 'USP13', 'USP7', 'WWP2', 'XIAP', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 0.5819721868908739 Spearman Correlation: 0.5839848121569017 Coefficient of Determination: 0.3386916263145464 RMSE: 0.5117476085593039 NRMSE: 0.080016825667939 MAPE: 720.6581121388473 Pearson Correlation: 0.25608005097821496 Spearman Correlation: 0.2685045948203843 Coefficient of Determination: -0.16422604302925037 RMSE: 0.5081608630867849 NRMSE: 0.12149401403117317 MAPE: 158.01780187149262 Predictor: ElasticNet Pearson Correlation: 0.577121087716234 Spearman Correlation: 0.5832742305831426 Coefficient of Determination: 0.33306862512337954 RMSE: 0.5139186580575998 NRMSE: 0.08035629083849578 MAPE: 741.318090423549 Pearson Correlation: 0.25139267624587674 Spearman Correlation: 0.25342710008852976 Coefficient of Determination: -0.15705800671006243 RMSE: 0.5065940971085968 NRMSE: 0.12111942263391116 MAPE: 157.25046666315575 Predictor: RandomForests Pearson Correlation: 0.5708312473716917 Spearman Correlation: 0.5006071900730924 Coefficient of Determination: 0.2861624064467695 RMSE: 0.5316839113489705 NRMSE: 0.08313406478758041 MAPE: 321.1635150456908 Pearson Correlation: 0.39228370703543847 Spearman Correlation: 0.42074445004295485 Coefficient of Determination: 0.14843218116755785 RMSE: 0.4346024592474943 NRMSE: 0.10390724889960654 MAPE: 111.93748242375841 Protein: BRCA2 Protein Interaction Partners Count: 100 x_train_column_count: 99 x_train columns: ['ATM', 'ATRIP', 'ATR', 'BARD1', 'BLM', 'BRCA1', 'BRIP1', 'SLX4', 'RHNO1', 'RMI2', 'CDK2', 'CDK4', 'CHEK1', 'CHEK2', 'DMC1', 'DNA2', 'EME1', 'EME2', 'EXO1', 'FANCD2', 'FANCE', 'FANCG', 'FANCI', 'GEN1', 'H2AFX', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HUS1', 'KAT5', 'SPIDR', 'MLH1', 'MLH3', 'MND1', 'MRE11A', 'MSH4', 'MSH5', 'MUS81', 'NBN', 'PALB2', 'PARP1', 'PCNA', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'PSMC3IP', 'RAD17', 'RAD1', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD9A', 'RAD9B', 'RBBP8', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SPO11', 'SYCP3', 'TEX15', 'TOP3A', 'TOPBP1', 'TP53', 'UBA52', 'UBB', 'UBC', 'WRN', 'XRCC2', 'XRCC3', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.5189218427520859 Spearman Correlation: 0.48245839810971913 Coefficient of Determination: 0.26927987888522054 RMSE: 0.1624589893637828 NRMSE: 0.10949437182472624 MAPE: 256.1590297870549 Pearson Correlation: 0.17052929129434105 Spearman Correlation: 0.17092233070237783 Coefficient of Determination: -0.034882799886200466 RMSE: 0.21783415733468134 NRMSE: 0.14982849963524156 MAPE: 292.3961381559951 Predictor: ElasticNet Pearson Correlation: 0.5156540077218871 Spearman Correlation: 0.4772002406776336 Coefficient of Determination: 0.26587169657195253 RMSE: 0.1628374145073184 NRMSE: 0.10974942341366188 MAPE: 237.6780379673323 Pearson Correlation: 0.1688317524913121 Spearman Correlation: 0.1709023803289318 Coefficient of Determination: -0.032345542333712896 RMSE: 0.2175669577319444 NRMSE: 0.14964471709135108 MAPE: 274.7508030771117 Predictor: RandomForests Pearson Correlation: 0.5221573333297352 Spearman Correlation: 0.46690069650256844 Coefficient of Determination: 0.19795589074461306 RMSE: 0.17020305099067898 NRMSE: 0.1147137269772457 MAPE: 197.09949288630483 Pearson Correlation: 0.05011125301404238 Spearman Correlation: 0.09698125911794413 Coefficient of Determination: -0.013596067374654464 RMSE: 0.21558217738816055 NRMSE: 0.14827956543353388 MAPE: 161.87918769290792 Protein: CDKN2A Protein Interaction Partners Count: 100 x_train_column_count: 100 x_train columns: ['ABL1', 'AKT1', 'ARF1', 'BMI1', 'BRCA1', 'CBX7', 'CCND1', 'CCND2', 'CCND3', 'CCNL1', 'CDC45', 'CDC6', 'CDC7', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPB', 'CTCF', 'DAXX', 'E2F1', 'E2F2', 'E2F3', 'EGFR', 'EGR1', 'AGO1', 'AGO3', 'AGO4', 'ERBB2', 'EZH2', 'FOXM1', 'GMNN', 'HDAC1', 'HIF1A', 'HRAS', 'HUWE1', 'IL6', 'KRAS', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAX', 'MCM10', 'MCM2', 'MCM5', 'MDM2', 'MDM4', 'MGMT', 'MLH1', 'MOV10', 'MRAS', 'MTAP', 'MYCN', 'MYC', 'NPM1', 'NRAS', 'ORC5', 'PIK3CA', 'PIK3R1', 'PTEN', 'RASSF1', 'RB1', 'RPS27A', 'RRAS2', 'RRAS', 'RUNX3', 'SMAD3', 'SMAD4', 'SMARCA4', 'SUMO1', 'SUMO2', 'SUMO3', 'TBX2', 'TERT', 'TFDP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TP53', 'TP63', 'TRIP12', 'TWIST1', 'UBA52', 'UBB', 'UBC', 'UBE2I', 'USP7', 'VEGFA', 'WRN', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.7248469273167808 Spearman Correlation: 0.6522991400525601 Coefficient of Determination: 0.5254030680405787 RMSE: 0.45990806592881 NRMSE: 0.10737487531023768 MAPE: 300.69564329485326 Pearson Correlation: 0.5319889491853224 Spearman Correlation: 0.4771555755059291 Coefficient of Determination: 0.2418443151327353 RMSE: 0.5716644576792002 NRMSE: 0.1764886720629805 MAPE: 188.1859851149854 Predictor: ElasticNet Pearson Correlation: 0.7247975488722134 Spearman Correlation: 0.6528803358374573 Coefficient of Determination: 0.5253314108396718 RMSE: 0.45994278431676766 NRMSE: 0.10738298102277916 MAPE: 296.0278895725544 Pearson Correlation: 0.5328568521430957 Spearman Correlation: 0.47682639434406915 Coefficient of Determination: 0.2433658476643643 RMSE: 0.5710905366983857 NRMSE: 0.1763114867396455 MAPE: 188.39988184644943 Predictor: RandomForests Pearson Correlation: 0.6713717701733481 Spearman Correlation: 0.6171187898147904 Coefficient of Determination: 0.4408312732603339 RMSE: 0.4992062341498074 NRMSE: 0.11654983053553591 MAPE: 202.2924022228656 Pearson Correlation: 0.6270859191911262 Spearman Correlation: 0.5914544962591366 Coefficient of Determination: 0.38440543231941837 RMSE: 0.515121151574826 NRMSE: 0.15903218535235897 MAPE: 102.26032325599306 Protein: TP53 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AKT1', 'APAF1', 'ATM', 'ATR', 'AURKA', 'AURKB', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2L1', 'BCL2', 'BCL6', 'BRCA1', 'CASP8', 'CCNA2', 'CCNE1', 'CCNG1', 'CDC25C', 'CDK2', 'CDK5', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CHEK1', 'CHEK2', 'COPS5', 'CREBBP', 'DDB2', 'DDX5', 'DYRK2', 'E2F4', 'EGR1', 'EHMT2', 'EP300', 'EZH2', 'FZR1', 'GADD45A', 'GLS2', 'GSK3B', 'HDAC1', 'HDAC2', 'HIF1A', 'HIPK2', 'HSP90AA1', 'HSPA1A', 'IGFBP3', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'MAPK14', 'MAPK1', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MCL1', 'MDM2', 'MDM4', 'MSH2', 'NGFR', 'NPM1', 'PLK3', 'PMAIP1', 'PPP1R13B', 'PPP1R13L', 'PRKDC', 'PRMT5', 'PTEN', 'RB1', 'RCHY1', 'DROSHA', 'RPA1', 'RRM2B', 'SETD7', 'SETD8', 'SFN', 'SIRT1', 'SMYD2', 'SNAI1', 'SNAI2', 'SP1', 'STAT3', 'STK11', 'SUMO1', 'SUMO2', 'TBP', 'TNFRSF10A', 'TNFRSF10B', 'TP53BP1', 'TP53BP2', 'TP53INP1', 'TP53RK', 'TXN', 'UBE2I', 'USP7', 'WRN', 'XRCC6', 'YY1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.6604922878327504 Spearman Correlation: 0.6037254325437036 Coefficient of Determination: 0.43625006228654106 RMSE: 0.3379594715989826 NRMSE: 0.0812207333811542 MAPE: 850.7211660221751 Pearson Correlation: 0.4967140892925583 Spearman Correlation: 0.4697489993640818 Coefficient of Determination: 0.1789092622919285 RMSE: 0.39004670300650923 NRMSE: 0.14544809541986928 MAPE: 630.8668286305544 Predictor: ElasticNet Pearson Correlation: 0.6520589991362492 Spearman Correlation: 0.5994461455496236 Coefficient of Determination: 0.4251654772911715 RMSE: 0.3412658178193623 NRMSE: 0.08201533713515077 MAPE: 800.2246083591899 Pearson Correlation: 0.49239048442672945 Spearman Correlation: 0.44515517649846015 Coefficient of Determination: 0.17986253494488103 RMSE: 0.3898202183925593 NRMSE: 0.14536363949321485 MAPE: 517.2606322546221 Predictor: RandomForests Pearson Correlation: 0.6391457427867844 Spearman Correlation: 0.5738541184231455 Coefficient of Determination: 0.35795781438014296 RMSE: 0.36066429582771786 NRMSE: 0.086677312143167 MAPE: 586.8426148813124 Pearson Correlation: 0.4804190782263101 Spearman Correlation: 0.3898437383115112 Coefficient of Determination: 0.21338759158484022 RMSE: 0.38176967754786406 NRMSE: 0.14236159941971818 MAPE: 385.7156469900238 Protein: CTNNB1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'AKT1', 'APC2', 'APC', 'AR', 'AXIN1', 'AXIN2', 'BCL9', 'BTRC', 'CASP3', 'CBY1', 'CCND1', 'CDC73', 'CDH11', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDH5', 'CDH8', 'CHD8', 'CREBBP', 'CSNK1A1', 'CSNK1E', 'CTBP1', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNBIP1', 'CTNND1', 'DVL1', 'DVL2', 'DVL3', 'EGFR', 'EGF', 'EP300', 'ERBB2', 'AMER1', 'FBXW11', 'FER', 'FGFR1', 'FOXO1', 'FOXO3', 'FYN', 'FZD1', 'FZD2', 'FZD5', 'GSK3A', 'GSK3B', 'HNF4A', 'IGF1R', 'IQGAP1', 'JUN', 'JUP', 'KDR', 'KLF4', 'LEF1', 'LRP5', 'LRP6', 'MAPK9', 'MEN1', 'MET', 'MMP7', 'MYC', 'NLK', 'NOTCH1', 'PIK3CA', 'PIK3R1', 'PITX2', 'PSEN1', 'PTPN11', 'PTPN1', 'PYGO2', 'RUVBL1', 'SKP1', 'SMAD4', 'SMAD7', 'SMARCA4', 'SOX17', 'SOX2', 'SOX6', 'SOX9', 'SRC', 'TBL1X', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TGFBR1', 'TGFBR2', 'TJP1', 'TLE1', 'VCL', 'VEGFA', 'WNT1', 'WNT3A', 'WNT8A', 'WNT8B', 'YWHAZ', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.6782169463242912 Spearman Correlation: 0.6536543128781496 Coefficient of Determination: 0.4599782262814466 RMSE: 0.56525376770937 NRMSE: 0.11118288113874311 MAPE: 365.24048637210416 Pearson Correlation: 0.4226083181216926 Spearman Correlation: 0.3748051721343159 Coefficient of Determination: -0.04605870049891059 RMSE: 0.6269277748449382 NRMSE: 0.20495203336001117 MAPE: 1174.0121470979045 Predictor: ElasticNet Pearson Correlation: 0.6776261245496615 Spearman Correlation: 0.653921907999064 Coefficient of Determination: 0.45917221865525126 RMSE: 0.5656754442007658 NRMSE: 0.11126582301352593 MAPE: 365.5540816408366 Pearson Correlation: 0.4254228358687379 Spearman Correlation: 0.37958328657464563 Coefficient of Determination: -0.03608777599517454 RMSE: 0.6239327149022367 NRMSE: 0.20397290362621745 MAPE: 1040.6998493266124 Predictor: RandomForests Pearson Correlation: 0.6661312165524925 Spearman Correlation: 0.6347797745153959 Coefficient of Determination: 0.43853256518190087 RMSE: 0.5763683393428425 NRMSE: 0.11336906753399735 MAPE: 242.10542978288473 Pearson Correlation: 0.43189919620587325 Spearman Correlation: 0.27905120893201024 Coefficient of Determination: 0.16249536723411284 RMSE: 0.5609615467177448 NRMSE: 0.18338669022123794 MAPE: 1007.4727106586553 Protein: CCNE1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['ABL1', 'BARD1', 'BRCA1', 'CABLES1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNH', 'CCT2', 'CCT3', 'CCT4', 'CCT6A', 'CCT7', 'CDC25A', 'CDC6', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDT1', 'CKS1B', 'CKS2', 'CUL1', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'EP400', 'FOXM1', 'HDAC1', 'IFNAR1', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'MNAT1', 'MYC', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PCNA', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB7', 'PSMC1', 'PSMC2', 'PSMC4', 'PSMC5', 'PSMD10', 'PSMD11', 'PSMD14', 'PSMD1', 'PSMD3', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSME3', 'PTK6', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RHOA', 'RPS27A', 'RRN3', 'SKP1', 'SKP2', 'STAT5A', 'STAT5B', 'TCP1', 'TFDP1', 'TP53', 'TP73', 'UBB', 'UBC', 'WEE1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.889662293733207 Spearman Correlation: 0.7214768507010174 Coefficient of Determination: 0.7914989968906314 RMSE: 0.23854831159762593 NRMSE: 0.057568914640931036 MAPE: 47.07317346782978 Pearson Correlation: 0.7341609096695693 Spearman Correlation: 0.49959974563273857 Coefficient of Determination: 0.4357314292236454 RMSE: 0.2740963575855825 NRMSE: 0.11939554714709347 MAPE: 101.90055834655192 Predictor: ElasticNet Pearson Correlation: 0.8896058856337231 Spearman Correlation: 0.720642393188851 Coefficient of Determination: 0.7913985555304344 RMSE: 0.23860576271691414 NRMSE: 0.057582779331735924 MAPE: 47.17210918857578 Pearson Correlation: 0.7346093736653401 Spearman Correlation: 0.5017843115250814 Coefficient of Determination: 0.43745098037674535 RMSE: 0.27367839851665304 NRMSE: 0.11921348543653484 MAPE: 102.04094612807457 Predictor: RandomForests Pearson Correlation: 0.8627114244015965 Spearman Correlation: 0.7269204277536142 Coefficient of Determination: 0.7416334567459337 RMSE: 0.26554639508307426 NRMSE: 0.06408436785555766 MAPE: 55.98907083758849 Pearson Correlation: 0.770885107897393 Spearman Correlation: 0.6684149573709636 Coefficient of Determination: 0.5291341557642604 RMSE: 0.25038535765203646 NRMSE: 0.1090671070488463 MAPE: 79.58878990181303 Protein: CCND1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ACTL6A', 'AKT1', 'ARID1A', 'ARID2', 'AR', 'ATF2', 'BRD2', 'BTG2', 'CCNA1', 'CCNB1', 'CCNE1', 'CCNH', 'CDC25A', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CKS1B', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUL1', 'DNMT3A', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'AGO2', 'EP300', 'ESR1', 'FOS', 'FOXA1', 'FOXM1', 'GADD45A', 'GATA3', 'GLI1', 'GLI3', 'GSK3B', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC4', 'HIST1H2BA', 'HIST2H2BE', 'HNF1A', 'IFNAR1', 'JAK2', 'JUN', 'KAT2B', 'LEF1', 'LYN', 'MAML1', 'MYB', 'MYC', 'NOTCH1', 'PBRM1', 'PCNA', 'PRMT5', 'PSMA6', 'PSMC6', 'PSMD10', 'PSMD6', 'PSMD7', 'PSME3', 'PTK6', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RELA', 'RUNX1', 'RUNX3', 'SKP1', 'SKP2', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'SUV39H1', 'TCF7L2', 'TFDP1', 'TP53', 'WDR77', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.5837974359856966 Spearman Correlation: 0.5579925334219846 Coefficient of Determination: 0.3408194462634734 RMSE: 0.19863634190917473 NRMSE: 0.11941442444432239 MAPE: 483.71548962989186 Pearson Correlation: 0.1508358763897695 Spearman Correlation: 0.11990922580082046 Coefficient of Determination: -0.14554458092158495 RMSE: 0.22448452790066623 NRMSE: 0.21271500658624903 MAPE: 377.5972700804395 Predictor: ElasticNet Pearson Correlation: 0.5835795622940965 Spearman Correlation: 0.5584287385055713 Coefficient of Determination: 0.3405642415251259 RMSE: 0.19867478966815788 NRMSE: 0.11943753812516256 MAPE: 478.48037167523313 Pearson Correlation: 0.1526926264734672 Spearman Correlation: 0.1227920547637751 Coefficient of Determination: -0.14307887688581933 RMSE: 0.22424280418875883 NRMSE: 0.2124859562305239 MAPE: 378.9303423623253 Predictor: RandomForests Pearson Correlation: 0.5574382931774727 Spearman Correlation: 0.5115894031152839 Coefficient of Determination: 0.27287753896835265 RMSE: 0.20862209166280588 NRMSE: 0.12541756842096757 MAPE: 484.02077540170245 Pearson Correlation: 0.38420245784361057 Spearman Correlation: 0.3416734414989403 Coefficient of Determination: 0.13797720234983835 RMSE: 0.194733106394091 NRMSE: 0.1845234252736973 MAPE: 286.8581137015489 Protein: ERBB2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ADAM17', 'ADRB2', 'AREG', 'ARHGEF11', 'ARHGEF12', 'BTC', 'CBL', 'CCND1', 'CD44', 'CDC37', 'CDH1', 'CTNNB1', 'CTNND1', 'CUL5', 'DIAPH1', 'DOCK7', 'EGFR', 'EGF', 'ERBB2IP', 'ERBB3', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FYN', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IL6R', 'IL6', 'INS', 'JAK1', 'JAK2', 'KRAS', 'LRPPRC', 'MAP2K1', 'MAPK8', 'MATK', 'MEMO1', 'MUC1', 'MUC4', 'MYC', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'PGAP3', 'PGR', 'PIK3CA', 'PIK3CB', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PLXNB1', 'PRKACA', 'PTEN', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'RHOA', 'RHOB', 'RHOC', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'RPS27A', 'SEMA4D', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SRC', 'STAT1', 'STAT3', 'STUB1', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TGFA', 'TP53', 'UBA52', 'UBB', 'UBC', 'VEGFA', 'YES1', 'YY1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 0.8532021254618394 Spearman Correlation: 0.7207290624252993 Coefficient of Determination: 0.7279538668926004 RMSE: 0.5117929717195496 NRMSE: 0.08719235594997182 MAPE: 537.2718365646931 Pearson Correlation: 0.7806645939488784 Spearman Correlation: 0.5663918083668892 Coefficient of Determination: 0.5880639226090223 RMSE: 0.6845300655682584 NRMSE: 0.12348114322250134 MAPE: 271.3092144267072 Predictor: ElasticNet Pearson Correlation: 0.8530535075028076 Spearman Correlation: 0.7208568299445149 Coefficient of Determination: 0.7277002705615085 RMSE: 0.5120314580855104 NRMSE: 0.08723298602748189 MAPE: 536.3464331429946 Pearson Correlation: 0.7808393893282347 Spearman Correlation: 0.5732697081884632 Coefficient of Determination: 0.5886973646769345 RMSE: 0.6840035555281704 NRMSE: 0.12338616702651173 MAPE: 271.0128537303341 Predictor: RandomForests Pearson Correlation: 0.8323152680716361 Spearman Correlation: 0.6466808582088528 Coefficient of Determination: 0.687121723576946 RMSE: 0.5488589421578967 NRMSE: 0.0935071540552152 MAPE: 530.1809820817119 Pearson Correlation: 0.8689888493238265 Spearman Correlation: 0.707782313058422 Coefficient of Determination: 0.7501293991063542 RMSE: 0.5331325437528497 NRMSE: 0.09617081747471855 MAPE: 199.28302683331736 Protein: ERBB3 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AKT2', 'ANGPT1', 'ANGPT2', 'AREG', 'AR', 'BDNF', 'BMP4', 'BTC', 'CBLB', 'CBL', 'CCND1', 'CDH1', 'CSF1', 'CSK', 'CTNNB1', 'DCN', 'DOCK7', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FGF10', 'FGF19', 'FGF1', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FIGF', 'FLNA', 'FOXO3', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IGF1', 'IGF2', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'JAK1', 'JAK2', 'KITLG', 'KRAS', 'LAMA1', 'LAMB1', 'LAMC2', 'MAP2K1', 'MAPK8', 'MET', 'MUC4', 'NGF', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NTF3', 'PA2G4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PRKACA', 'PTEN', 'PTPN11', 'RNF41', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SOX10', 'SRC', 'TGFA', 'VEGFA', 'VEGFB', 'VEGFC', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.617864640087878 Spearman Correlation: 0.6168648283503396 Coefficient of Determination: 0.38175671347092277 RMSE: 0.35461775078286684 NRMSE: 0.1285839255595321 MAPE: 204.3105495774035 Pearson Correlation: 0.1940423714298934 Spearman Correlation: 0.26638985523510267 Coefficient of Determination: -0.23446970188390992 RMSE: 0.5496689746744855 NRMSE: 0.15282379222200193 MAPE: 217.11290064205474 Predictor: ElasticNet Pearson Correlation: 0.6155181710457152 Spearman Correlation: 0.6167277364117386 Coefficient of Determination: 0.37886197043677483 RMSE: 0.35544697811763626 NRMSE: 0.1288846022900413 MAPE: 203.87282398816038 Pearson Correlation: 0.19444641120678208 Spearman Correlation: 0.2626341974338832 Coefficient of Determination: -0.2309117898294224 RMSE: 0.5488762921838556 NRMSE: 0.15260340367939265 MAPE: 216.70383833216383 Predictor: RandomForests Pearson Correlation: 0.5564502589840349 Spearman Correlation: 0.5964049879734662 Coefficient of Determination: 0.29656084263052207 RMSE: 0.3782631512891581 NRMSE: 0.13715771638589133 MAPE: 233.75807960440545 Pearson Correlation: 0.37862986365231166 Spearman Correlation: 0.3657286642704281 Coefficient of Determination: 0.11713287482390555 RMSE: 0.46484555194438537 NRMSE: 0.12924043982606112 MAPE: 159.01138616480682 Fold: 4 Protein: RB1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AATF', 'ABL1', 'AKT1', 'AR', 'ASF1A', 'ATF2', 'BGLAP', 'CASP3', 'CBX4', 'CCNA1', 'CCNA2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CEBPA', 'COL1A1', 'CREBBP', 'CTBP1', 'DNMT1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'ELF1', 'EP300', 'FOXM1', 'FZR1', 'GNB2L1', 'H1F0', 'H2AFV', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HIST1H2BA', 'HIST2H2AC', 'HIST2H2BE', 'HMGA1', 'HMGA2', 'HSP90AA1', 'ID2', 'JUN', 'MAPK14', 'MAPK1', 'MAPK3', 'MDM2', 'MEF2C', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NFYC', 'PCNA', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP2CA', 'PPP2CB', 'PRIM1', 'PRIM2', 'RAF1', 'RBBP4', 'RUNX2', 'SIRT1', 'SKP2', 'SMARCA2', 'SMC2', 'SMC4', 'SP100', 'SP1', 'SP3', 'SPI1', 'SUV39H1', 'TAF1', 'TBP', 'TERT', 'TFDP1', 'TP53BP1', 'TP53', 'TP73', 'YAP1', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.4875747745701666 Spearman Correlation: 0.4555438598018932 Coefficient of Determination: 0.2377291607971489 RMSE: 0.2195893929179345 NRMSE: 0.08030624375290174 MAPE: 345.99876222347797 Pearson Correlation: 0.12296914457550298 Spearman Correlation: 0.16345590344019253 Coefficient of Determination: -0.583042728384102 RMSE: 0.20745336561686406 NRMSE: 0.19876342852188716 MAPE: 365.30431589863343 Predictor: ElasticNet Pearson Correlation: 0.4870676645078746 Spearman Correlation: 0.45602287238865025 Coefficient of Determination: 0.23722957999348127 RMSE: 0.2196613389187999 NRMSE: 0.08033255519265649 MAPE: 353.73839399920143 Pearson Correlation: 0.12423927605610581 Spearman Correlation: 0.1624184840209978 Coefficient of Determination: -0.582454160646452 RMSE: 0.20741479694557285 NRMSE: 0.19872647543936386 MAPE: 361.76081850408934 Predictor: RandomForests Pearson Correlation: 0.5295541412776307 Spearman Correlation: 0.3951745569721164 Coefficient of Determination: 0.16828902434987514 RMSE: 0.22937333090508497 NRMSE: 0.08388433693135056 MAPE: 170.33048573313587 Pearson Correlation: 0.10988100774688508 Spearman Correlation: 0.22686816543847185 Coefficient of Determination: -0.09267721288551667 RMSE: 0.17235350095759733 NRMSE: 0.16513384907599485 MAPE: 105.74982355234191 Protein: CDH1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ACTA1', 'ACTN1', 'ADAM10', 'ADAM15', 'CA2', 'CASP3', 'CBLL1', 'CDC42', 'CDH17', 'CDH3', 'CDH5', 'CTBP1', 'CTNNA1', 'CTNNB1', 'CTNND1', 'CTTN', 'DLG1', 'EFNA1', 'EGFR', 'EGF', 'ENAH', 'EPCAM', 'EPHA2', 'EXOC3', 'EXOC4', 'FER', 'FLOT1', 'FLOT2', 'FMN1', 'FYN', 'GDNF', 'GNA12', 'GNA13', 'HGF', 'HGS', 'IGF1R', 'IGF1', 'IGF2', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'ITGA6', 'ITGAE', 'ITGB4', 'ITGB7', 'AJUBA', 'JUP', 'KIFC3', 'KLK7', 'KLRG1', 'LAMB1', 'LAMC2', 'LIMA1', 'MAPK1', 'MAPK3', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MLLT4', 'MMP3', 'MMP7', 'MMP9', 'MYO6', 'NCSTN', 'NUMB', 'PARD6A', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PLEKHA7', 'PLG', 'PRKCI', 'PRKCZ', 'PSEN1', 'PVRL1', 'PVRL2', 'RAB5A', 'RAB7A', 'RAC1', 'RAP1A', 'RET', 'RHOA', 'SKIL', 'SMAD3', 'SMAD4', 'SNAI1', 'SNAI2', 'SNAI3', 'SRC', 'STX4', 'TJP1', 'TWIST1', 'VASP', 'VCL', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 0.7438080568294363 Spearman Correlation: 0.7079022704896073 Coefficient of Determination: 0.5532504254043817 RMSE: 0.7479396338686939 NRMSE: 0.11909487498307281 MAPE: 503.4572347253226 Pearson Correlation: 0.3693417982501307 Spearman Correlation: 0.41259616703450164 Coefficient of Determination: -0.39858373465585384 RMSE: 1.3794605745587767 NRMSE: 0.25025590046783075 MAPE: 468.2645336608263 Predictor: ElasticNet Pearson Correlation: 0.7268976233098485 Spearman Correlation: 0.6988756266089179 Coefficient of Determination: 0.5278645006963443 RMSE: 0.768896353867769 NRMSE: 0.12243182603543978 MAPE: 565.807538666221 Pearson Correlation: 0.3046733579393796 Spearman Correlation: 0.40932430578934903 Coefficient of Determination: -0.6856783243381122 RMSE: 1.514441169795379 NRMSE: 0.2747435089066759 MAPE: 541.0335259282433 Predictor: RandomForests Pearson Correlation: 0.744403162376981 Spearman Correlation: 0.7048831848126462 Coefficient of Determination: 0.5496207955569148 RMSE: 0.7509718161643397 NRMSE: 0.1195776911825005 MAPE: 236.42227241163098 Pearson Correlation: 0.7645869616479644 Spearman Correlation: 0.46733260436301827 Coefficient of Determination: 0.5170582344841836 RMSE: 0.8106108992805026 NRMSE: 0.14705759937602092 MAPE: 192.8409827623321 Protein: CDH2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ADAM10', 'AFP', 'AHSG', 'ALB', 'APLP2', 'APOA1', 'APOB', 'APOE', 'APP', 'AXIN1', 'BDNF', 'BMP4', 'BNIP2', 'CALU', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH17', 'CDH18', 'CDH1', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDON', 'CREBBP', 'CSF1', 'CST3', 'CTNNA1', 'CTNNA2', 'CTNNB1', 'CTNND1', 'CYR61', 'FAM20C', 'FBN1', 'FER', 'FGFR1', 'FN1', 'FSTL1', 'GAS6', 'GJA1', 'GOLM1', 'GPC3', 'GRIA2', 'HSP90B1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL6', 'ITIH2', 'JUP', 'KIF5B', 'KNG1', 'KTN1', 'LAMB1', 'LAMC1', 'LGALS1', 'LRP5', 'LTBP1', 'MAP2K6', 'MAPK11', 'MAPK14', 'MATN3', 'MEF2A', 'MEF2C', 'MEF2D', 'MET', 'MFGE8', 'MSLN', 'NTRK2', 'P4HB', 'PCSK9', 'PIK3CA', 'PIK3R1', 'PTPN11', 'PTPN1', 'RAC1', 'RHOA', 'ROBO1', 'SCG2', 'SDC2', 'SERPINA1', 'SLIT1', 'SNAI1', 'SNAI2', 'SPAG9', 'SPARCL1', 'SPP1', 'STC2', 'TCF3', 'TIMP1', 'TMEM132A', 'TNC', 'VCAN', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.49078685904123714 Spearman Correlation: 0.470001824232073 Coefficient of Determination: 0.24087174100756326 RMSE: 0.33053173480115666 NRMSE: 0.11976655366372806 MAPE: 1569.6862332841854 Pearson Correlation: 0.1086319118091553 Spearman Correlation: 0.07453708899113456 Coefficient of Determination: -0.40585818235857785 RMSE: 0.39515102269043273 NRMSE: 0.2038458084119685 MAPE: 390.9069631579005 Predictor: ElasticNet Pearson Correlation: 0.4884032553350905 Spearman Correlation: 0.46369451632063724 Coefficient of Determination: 0.23853506066869568 RMSE: 0.33104005046957946 NRMSE: 0.11995073935414867 MAPE: 1606.4553237077398 Pearson Correlation: 0.12418388386087024 Spearman Correlation: 0.08365939724934228 Coefficient of Determination: -0.3641025212918787 RMSE: 0.38923856218255454 NRMSE: 0.20079575862663246 MAPE: 392.9676478435914 Predictor: RandomForests Pearson Correlation: 0.4802801826449157 Spearman Correlation: 0.42266133554478724 Coefficient of Determination: 0.15048099135895376 RMSE: 0.34965692524578784 NRMSE: 0.12669647265953615 MAPE: 1040.8719225041978 Pearson Correlation: 0.23166485594101424 Spearman Correlation: 0.265023254654048 Coefficient of Determination: 0.013150583019315598 RMSE: 0.3310684520706445 NRMSE: 0.17078765428100598 MAPE: 171.55854601333823 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.5168390583924106 Spearman Correlation: 0.5403178575375212 Coefficient of Determination: 0.2671226122799535 RMSE: 0.17627602933379624 NRMSE: 0.12562968009877576 MAPE: 434.55039857009865 Pearson Correlation: 0.40637234139747885 Spearman Correlation: 0.40395266773899924 Coefficient of Determination: -0.3251363019352176 RMSE: 0.23920368452191157 NRMSE: 0.21290179657325198 MAPE: 926.9153647229047 Predictor: ElasticNet Pearson Correlation: 0.5143863073028511 Spearman Correlation: 0.5380693649707703 Coefficient of Determination: 0.2645859682308932 RMSE: 0.17658083017538515 NRMSE: 0.12584690777497978 MAPE: 437.076637830486 Pearson Correlation: 0.4769395563720625 Spearman Correlation: 0.43205276873776494 Coefficient of Determination: -0.04374258463174607 RMSE: 0.21229232364861633 NRMSE: 0.18894950215267484 MAPE: 876.9234503548818 Predictor: RandomForests Pearson Correlation: 0.5492470972367409 Spearman Correlation: 0.5433468367086957 Coefficient of Determination: 0.2574319733918553 RMSE: 0.17743762712931946 NRMSE: 0.12645753604723653 MAPE: 435.61382629898475 Pearson Correlation: 0.450451981096876 Spearman Correlation: 0.3980673075724137 Coefficient of Determination: 0.12512572123777044 RMSE: 0.194361576653241 NRMSE: 0.1729903489446223 MAPE: 635.6356775073434 Protein: PTEN Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AR', 'BCR', 'CD79A', 'CD79B', 'CDIPT', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'DLG1', 'EGFR', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'FOXO3', 'FOXO4', 'FRK', 'GRB2', 'HRAS', 'INPP4A', 'INPP4B', 'INPP5B', 'INPP5D', 'INPP5J', 'INPP5K', 'INPPL1', 'IPMK', 'IRS1', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'MAST2', 'MDM2', 'MDM4', 'MKRN1', 'MTOR', 'MYC', 'NEDD4', 'NOTCH1', 'OCRL', 'OTUD3', 'PARK7', 'PDGFB', 'PDGFRB', 'PI4K2A', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIKFYVE', 'PIP4K2A', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PML', 'PREX2', 'PSMA6', 'PSMA7', 'PSMB9', 'PSMC6', 'PSMD10', 'PSMD5', 'PSME3', 'PTK2', 'RICTOR', 'RNF146', 'ROCK1', 'ROCK2', 'RPS27A', 'RPS6KB1', 'SACM1L', 'SHC1', 'SLC9A3R1', 'SLC9A3R2', 'SOS1', 'STK11', 'STUB1', 'SYNJ1', 'SYNJ2', 'TNKS2', 'TNKS', 'TNRC6A', 'TNRC6B', 'TP53', 'UBB', 'UBC', 'USP13', 'USP7', 'WWP2', 'XIAP', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 0.5770441596771163 Spearman Correlation: 0.5568087081035928 Coefficient of Determination: 0.33297996221746895 RMSE: 0.458814053996104 NRMSE: 0.08875233170769575 MAPE: 471.79314637157466 Pearson Correlation: 0.269380182314481 Spearman Correlation: 0.3216773276474769 Coefficient of Determination: 0.025125130029541642 RMSE: 0.7361454998995645 NRMSE: 0.11510366662490258 MAPE: 735.2465334721728 Predictor: ElasticNet Pearson Correlation: 0.5764082642306637 Spearman Correlation: 0.5544177294148367 Coefficient of Determination: 0.33224627171274135 RMSE: 0.4590663215278706 NRMSE: 0.08880112997676234 MAPE: 457.9166561380255 Pearson Correlation: 0.25784252539121905 Spearman Correlation: 0.3110338034140077 Coefficient of Determination: 0.01664736907699016 RMSE: 0.7393394258087927 NRMSE: 0.11560306869029673 MAPE: 772.151197018346 Predictor: RandomForests Pearson Correlation: 0.5482440039800978 Spearman Correlation: 0.5008355919250681 Coefficient of Determination: 0.2587059902201798 RMSE: 0.48368488651714353 NRMSE: 0.09356330983386404 MAPE: 188.87375994782946 Pearson Correlation: 0.5167831029968877 Spearman Correlation: 0.4806436046832455 Coefficient of Determination: 0.2239414646934551 RMSE: 0.656805020411679 NRMSE: 0.10269799396633242 MAPE: 309.59387554589847 Protein: BRCA2 Protein Interaction Partners Count: 100 x_train_column_count: 99 x_train columns: ['ATM', 'ATRIP', 'ATR', 'BARD1', 'BLM', 'BRCA1', 'BRIP1', 'SLX4', 'RHNO1', 'RMI2', 'CDK2', 'CDK4', 'CHEK1', 'CHEK2', 'DMC1', 'DNA2', 'EME1', 'EME2', 'EXO1', 'FANCD2', 'FANCE', 'FANCG', 'FANCI', 'GEN1', 'H2AFX', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HUS1', 'KAT5', 'SPIDR', 'MLH1', 'MLH3', 'MND1', 'MRE11A', 'MSH4', 'MSH5', 'MUS81', 'NBN', 'PALB2', 'PARP1', 'PCNA', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'PSMC3IP', 'RAD17', 'RAD1', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD9A', 'RAD9B', 'RBBP8', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SPO11', 'SYCP3', 'TEX15', 'TOP3A', 'TOPBP1', 'TP53', 'UBA52', 'UBB', 'UBC', 'WRN', 'XRCC2', 'XRCC3', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.5065671260114403 Spearman Correlation: 0.4457829338421237 Coefficient of Determination: 0.25661025315549035 RMSE: 0.16536770479884885 NRMSE: 0.10653419539304163 MAPE: 254.77606086263881 Pearson Correlation: 0.20434036568165248 Spearman Correlation: 0.14894699435155054 Coefficient of Determination: -0.07765372281538196 RMSE: 0.2160364895201502 NRMSE: 0.20988476699939787 MAPE: 260.7488924021555 Predictor: ElasticNet Pearson Correlation: 0.4973363728816195 Spearman Correlation: 0.4366272117007323 Coefficient of Determination: 0.24728312576636158 RMSE: 0.16640188486696492 NRMSE: 0.10720044120918984 MAPE: 228.88783262823665 Pearson Correlation: 0.23845126144145778 Spearman Correlation: 0.199047369667951 Coefficient of Determination: -0.023829196650542395 RMSE: 0.2105723044372492 NRMSE: 0.20457617669822425 MAPE: 247.57886881754496 Predictor: RandomForests Pearson Correlation: 0.5318566934237081 Spearman Correlation: 0.42883181297300554 Coefficient of Determination: 0.15830770147358475 RMSE: 0.17596208201913474 NRMSE: 0.11335936995917845 MAPE: 148.01594316382852 Pearson Correlation: 0.2035809587675015 Spearman Correlation: 0.2005236973029589 Coefficient of Determination: 0.033858378891521435 RMSE: 0.20455395963448292 NRMSE: 0.19872920658934912 MAPE: 248.0845807777245 Protein: CDKN2A Protein Interaction Partners Count: 100 x_train_column_count: 100 x_train columns: ['ABL1', 'AKT1', 'ARF1', 'BMI1', 'BRCA1', 'CBX7', 'CCND1', 'CCND2', 'CCND3', 'CCNL1', 'CDC45', 'CDC6', 'CDC7', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPB', 'CTCF', 'DAXX', 'E2F1', 'E2F2', 'E2F3', 'EGFR', 'EGR1', 'AGO1', 'AGO3', 'AGO4', 'ERBB2', 'EZH2', 'FOXM1', 'GMNN', 'HDAC1', 'HIF1A', 'HRAS', 'HUWE1', 'IL6', 'KRAS', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAX', 'MCM10', 'MCM2', 'MCM5', 'MDM2', 'MDM4', 'MGMT', 'MLH1', 'MOV10', 'MRAS', 'MTAP', 'MYCN', 'MYC', 'NPM1', 'NRAS', 'ORC5', 'PIK3CA', 'PIK3R1', 'PTEN', 'RASSF1', 'RB1', 'RPS27A', 'RRAS2', 'RRAS', 'RUNX3', 'SMAD3', 'SMAD4', 'SMARCA4', 'SUMO1', 'SUMO2', 'SUMO3', 'TBX2', 'TERT', 'TFDP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TP53', 'TP63', 'TRIP12', 'TWIST1', 'UBA52', 'UBB', 'UBC', 'UBE2I', 'USP7', 'VEGFA', 'WRN', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.7248491057409845 Spearman Correlation: 0.6509232503493716 Coefficient of Determination: 0.5254062260935048 RMSE: 0.4642927795033928 NRMSE: 0.10496050175277331 MAPE: 296.7193895284198 Pearson Correlation: 0.5469339731300371 Spearman Correlation: 0.4337934388209329 Coefficient of Determination: 0.16559299155937812 RMSE: 0.5760959840606501 NRMSE: 0.17357516844249776 MAPE: 239.93088455589336 Predictor: ElasticNet Pearson Correlation: 0.7248448002457887 Spearman Correlation: 0.6510353744367523 Coefficient of Determination: 0.5253999186346292 RMSE: 0.46429586477130397 NRMSE: 0.10496119922489068 MAPE: 295.2138443042552 Pearson Correlation: 0.5469212057156932 Spearman Correlation: 0.4322921732191175 Coefficient of Determination: 0.16584375878103774 RMSE: 0.5760094094970871 NRMSE: 0.17354908390993887 MAPE: 240.10056032239362 Predictor: RandomForests Pearson Correlation: 0.6785030748887375 Spearman Correlation: 0.6100101397347005 Coefficient of Determination: 0.4526660084016304 RMSE: 0.49860556531137956 NRMSE: 0.11271743309853724 MAPE: 194.65443341141966 Pearson Correlation: 0.6044111873448079 Spearman Correlation: 0.4954905640476105 Coefficient of Determination: 0.34997621094047127 RMSE: 0.508476049802592 NRMSE: 0.15320158174226936 MAPE: 144.40960714327383 Protein: TP53 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AKT1', 'APAF1', 'ATM', 'ATR', 'AURKA', 'AURKB', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2L1', 'BCL2', 'BCL6', 'BRCA1', 'CASP8', 'CCNA2', 'CCNE1', 'CCNG1', 'CDC25C', 'CDK2', 'CDK5', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CHEK1', 'CHEK2', 'COPS5', 'CREBBP', 'DDB2', 'DDX5', 'DYRK2', 'E2F4', 'EGR1', 'EHMT2', 'EP300', 'EZH2', 'FZR1', 'GADD45A', 'GLS2', 'GSK3B', 'HDAC1', 'HDAC2', 'HIF1A', 'HIPK2', 'HSP90AA1', 'HSPA1A', 'IGFBP3', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'MAPK14', 'MAPK1', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MCL1', 'MDM2', 'MDM4', 'MSH2', 'NGFR', 'NPM1', 'PLK3', 'PMAIP1', 'PPP1R13B', 'PPP1R13L', 'PRKDC', 'PRMT5', 'PTEN', 'RB1', 'RCHY1', 'DROSHA', 'RPA1', 'RRM2B', 'SETD7', 'SETD8', 'SFN', 'SIRT1', 'SMYD2', 'SNAI1', 'SNAI2', 'SP1', 'STAT3', 'STK11', 'SUMO1', 'SUMO2', 'TBP', 'TNFRSF10A', 'TNFRSF10B', 'TP53BP1', 'TP53BP2', 'TP53INP1', 'TP53RK', 'TXN', 'UBE2I', 'USP7', 'WRN', 'XRCC6', 'YY1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 0.666014426079598 Spearman Correlation: 0.6194033969783946 Coefficient of Determination: 0.44357521574613623 RMSE: 0.33576137500726577 NRMSE: 0.08069247176334193 MAPE: 1142.624060217158 Pearson Correlation: 0.46079247389988365 Spearman Correlation: 0.3757179017194728 Coefficient of Determination: 0.11269311630959222 RMSE: 0.40675414452454595 NRMSE: 0.12907912684835807 MAPE: 376.21112292653766 Predictor: ElasticNet Pearson Correlation: 0.6562163465492108 Spearman Correlation: 0.6136970515429999 Coefficient of Determination: 0.4305835301782849 RMSE: 0.3396585208157706 NRMSE: 0.08162906051808955 MAPE: 1074.028378489395 Pearson Correlation: 0.46884597596979627 Spearman Correlation: 0.37707951470716594 Coefficient of Determination: 0.14735836057510177 RMSE: 0.39872946532395465 NRMSE: 0.12653257975499957 MAPE: 296.58453875394645 Predictor: RandomForests Pearson Correlation: 0.6260084256272452 Spearman Correlation: 0.5648387396756926 Coefficient of Determination: 0.3376507206713698 RMSE: 0.3663287767337246 NRMSE: 0.08803863896508643 MAPE: 712.8688351753389 Pearson Correlation: 0.5540588047355898 Spearman Correlation: 0.4174417227336003 Coefficient of Determination: 0.26895005842180686 RMSE: 0.3692058593772897 NRMSE: 0.11716357558304445 MAPE: 215.8827991337366 Protein: CTNNB1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'AKT1', 'APC2', 'APC', 'AR', 'AXIN1', 'AXIN2', 'BCL9', 'BTRC', 'CASP3', 'CBY1', 'CCND1', 'CDC73', 'CDH11', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDH5', 'CDH8', 'CHD8', 'CREBBP', 'CSNK1A1', 'CSNK1E', 'CTBP1', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNBIP1', 'CTNND1', 'DVL1', 'DVL2', 'DVL3', 'EGFR', 'EGF', 'EP300', 'ERBB2', 'AMER1', 'FBXW11', 'FER', 'FGFR1', 'FOXO1', 'FOXO3', 'FYN', 'FZD1', 'FZD2', 'FZD5', 'GSK3A', 'GSK3B', 'HNF4A', 'IGF1R', 'IQGAP1', 'JUN', 'JUP', 'KDR', 'KLF4', 'LEF1', 'LRP5', 'LRP6', 'MAPK9', 'MEN1', 'MET', 'MMP7', 'MYC', 'NLK', 'NOTCH1', 'PIK3CA', 'PIK3R1', 'PITX2', 'PSEN1', 'PTPN11', 'PTPN1', 'PYGO2', 'RUVBL1', 'SKP1', 'SMAD4', 'SMAD7', 'SMARCA4', 'SOX17', 'SOX2', 'SOX6', 'SOX9', 'SRC', 'TBL1X', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TGFBR1', 'TGFBR2', 'TJP1', 'TLE1', 'VCL', 'VEGFA', 'WNT1', 'WNT3A', 'WNT8A', 'WNT8B', 'YWHAZ', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.6765721484765086 Spearman Correlation: 0.6544306788468376 Coefficient of Determination: 0.4577498720941189 RMSE: 0.5238778929236754 NRMSE: 0.12652832888698565 MAPE: 384.99618410545384 Pearson Correlation: 0.26808394696493565 Spearman Correlation: 0.35945834736093973 Coefficient of Determination: -0.2998031570701829 RMSE: 0.9148693610995594 NRMSE: 0.1923449165544444 MAPE: 812.4894971280469 Predictor: ElasticNet Pearson Correlation: 0.6756715743511094 Spearman Correlation: 0.6544935222810521 Coefficient of Determination: 0.45652860281299346 RMSE: 0.524467506562071 NRMSE: 0.12667073388128466 MAPE: 364.0386947118417 Pearson Correlation: 0.25688066279102484 Spearman Correlation: 0.35771268968441006 Coefficient of Determination: -0.3510491080979845 RMSE: 0.9327298103080625 NRMSE: 0.19609995170886857 MAPE: 842.2967545756055 Predictor: RandomForests Pearson Correlation: 0.6298361851047681 Spearman Correlation: 0.6034829557413277 Coefficient of Determination: 0.38525123555487584 RMSE: 0.5578007229258137 NRMSE: 0.13472145757072113 MAPE: 462.6803024204656 Pearson Correlation: 0.6869391646082794 Spearman Correlation: 0.46173892442549164 Coefficient of Determination: 0.31216754394539836 RMSE: 0.6655207824715764 NRMSE: 0.13992111312580446 MAPE: 582.5516266649797 Protein: CCNE1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['ABL1', 'BARD1', 'BRCA1', 'CABLES1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNH', 'CCT2', 'CCT3', 'CCT4', 'CCT6A', 'CCT7', 'CDC25A', 'CDC6', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDT1', 'CKS1B', 'CKS2', 'CUL1', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'EP400', 'FOXM1', 'HDAC1', 'IFNAR1', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'MNAT1', 'MYC', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PCNA', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB7', 'PSMC1', 'PSMC2', 'PSMC4', 'PSMC5', 'PSMD10', 'PSMD11', 'PSMD14', 'PSMD1', 'PSMD3', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSME3', 'PTK6', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RHOA', 'RPS27A', 'RRN3', 'SKP1', 'SKP2', 'STAT5A', 'STAT5B', 'TCP1', 'TFDP1', 'TP53', 'TP73', 'UBB', 'UBC', 'WEE1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.8820824089641274 Spearman Correlation: 0.6787743596799631 Coefficient of Determination: 0.7780693762039579 RMSE: 0.23781087026091333 NRMSE: 0.0573909477667093 MAPE: 51.62512760646417 Pearson Correlation: 0.7769371602643161 Spearman Correlation: 0.636549084153169 Coefficient of Determination: 0.5976084252785832 RMSE: 0.28678171353158183 NRMSE: 0.11702510141662527 MAPE: 61.53940674464771 Predictor: ElasticNet Pearson Correlation: 0.8820811139455991 Spearman Correlation: 0.6785431759990957 Coefficient of Determination: 0.778066986675892 RMSE: 0.2378121505128441 NRMSE: 0.057391256730179335 MAPE: 51.636425982183724 Pearson Correlation: 0.7771104560248948 Spearman Correlation: 0.6352622850658987 Coefficient of Determination: 0.5979020051164252 RMSE: 0.28667707827521954 NRMSE: 0.11698240360532913 MAPE: 61.55222580529759 Predictor: RandomForests Pearson Correlation: 0.8565870302724811 Spearman Correlation: 0.7165380852645807 Coefficient of Determination: 0.7296686800316297 RMSE: 0.26246492132105786 NRMSE: 0.06334071513889951 MAPE: 55.385584777179474 Pearson Correlation: 0.8423483880610949 Spearman Correlation: 0.7087570314332251 Coefficient of Determination: 0.7005549918089391 RMSE: 0.24739194483907934 NRMSE: 0.10095158117974348 MAPE: 74.36074031684599 Protein: CCND1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ACTL6A', 'AKT1', 'ARID1A', 'ARID2', 'AR', 'ATF2', 'BRD2', 'BTG2', 'CCNA1', 'CCNB1', 'CCNE1', 'CCNH', 'CDC25A', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CKS1B', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUL1', 'DNMT3A', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'AGO2', 'EP300', 'ESR1', 'FOS', 'FOXA1', 'FOXM1', 'GADD45A', 'GATA3', 'GLI1', 'GLI3', 'GSK3B', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC4', 'HIST1H2BA', 'HIST2H2BE', 'HNF1A', 'IFNAR1', 'JAK2', 'JUN', 'KAT2B', 'LEF1', 'LYN', 'MAML1', 'MYB', 'MYC', 'NOTCH1', 'PBRM1', 'PCNA', 'PRMT5', 'PSMA6', 'PSMC6', 'PSMD10', 'PSMD6', 'PSMD7', 'PSME3', 'PTK6', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RELA', 'RUNX1', 'RUNX3', 'SKP1', 'SKP2', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'SUV39H1', 'TCF7L2', 'TFDP1', 'TP53', 'WDR77', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 0.5745038038175604 Spearman Correlation: 0.5396778432288746 Coefficient of Determination: 0.3300546206008458 RMSE: 0.19669186609389477 NRMSE: 0.12566403834214665 MAPE: 572.9394168021299 Pearson Correlation: 0.32270356714746756 Spearman Correlation: 0.316440354617888 Coefficient of Determination: -0.0014348772032495294 RMSE: 0.2291660870340377 NRMSE: 0.14452957053105306 MAPE: 518.1410701654156 Predictor: ElasticNet Pearson Correlation: 0.572868936647106 Spearman Correlation: 0.5379976002363313 Coefficient of Determination: 0.32817799162248507 RMSE: 0.19696715684027874 NRMSE: 0.1258399182480921 MAPE: 569.2508763333769 Pearson Correlation: 0.3242351742257683 Spearman Correlation: 0.3180762852404644 Coefficient of Determination: -0.0004921583162058596 RMSE: 0.22905819681047665 NRMSE: 0.1444615267472734 MAPE: 515.3030836187829 Predictor: RandomForests Pearson Correlation: 0.5449419150508589 Spearman Correlation: 0.5060722495807217 Coefficient of Determination: 0.2553511196797267 RMSE: 0.20736835045187313 NRMSE: 0.13248511420239525 MAPE: 471.55277629370164 Pearson Correlation: 0.4789593490371943 Spearman Correlation: 0.43193077178093386 Coefficient of Determination: 0.20473356084489525 RMSE: 0.20421861225188792 NRMSE: 0.1287957948107265 MAPE: 474.9640282427148 Protein: ERBB2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ADAM17', 'ADRB2', 'AREG', 'ARHGEF11', 'ARHGEF12', 'BTC', 'CBL', 'CCND1', 'CD44', 'CDC37', 'CDH1', 'CTNNB1', 'CTNND1', 'CUL5', 'DIAPH1', 'DOCK7', 'EGFR', 'EGF', 'ERBB2IP', 'ERBB3', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FYN', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IL6R', 'IL6', 'INS', 'JAK1', 'JAK2', 'KRAS', 'LRPPRC', 'MAP2K1', 'MAPK8', 'MATK', 'MEMO1', 'MUC1', 'MUC4', 'MYC', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'PGAP3', 'PGR', 'PIK3CA', 'PIK3CB', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PLXNB1', 'PRKACA', 'PTEN', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'RHOA', 'RHOB', 'RHOC', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'RPS27A', 'SEMA4D', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SRC', 'STAT1', 'STAT3', 'STUB1', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TGFA', 'TP53', 'UBA52', 'UBB', 'UBC', 'VEGFA', 'YES1', 'YY1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 0.8553565258321236 Spearman Correlation: 0.7251730294326125 Coefficient of Determination: 0.7316347862835997 RMSE: 0.5081063524984162 NRMSE: 0.08656427969034468 MAPE: 475.68009763556455 Pearson Correlation: 0.77601009416041 Spearman Correlation: 0.5734841749704267 Coefficient of Determination: 0.5643858809029398 RMSE: 0.6842106759841494 NRMSE: 0.12320572549864037 MAPE: 290.1927712455346 Predictor: ElasticNet Pearson Correlation: 0.8547700698704557 Spearman Correlation: 0.7245667887367928 Coefficient of Determination: 0.730631861271755 RMSE: 0.5090549056701872 NRMSE: 0.08672588133468273 MAPE: 485.79813342358335 Pearson Correlation: 0.7791786012546983 Spearman Correlation: 0.5767809782931681 Coefficient of Determination: 0.5729408338061501 RMSE: 0.6774588123560208 NRMSE: 0.12198991831238895 MAPE: 286.7527514087333 Predictor: RandomForests Pearson Correlation: 0.8504928402137844 Spearman Correlation: 0.6382173011711788 Coefficient of Determination: 0.7199156170936907 RMSE: 0.5190819903990866 NRMSE: 0.08843416024653503 MAPE: 441.0256879142006 Pearson Correlation: 0.7841628552095843 Spearman Correlation: 0.6794134113363717 Coefficient of Determination: 0.5622509444231605 RMSE: 0.6858852784224256 NRMSE: 0.12350727093716024 MAPE: 216.17263456060311 Protein: ERBB3 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AKT2', 'ANGPT1', 'ANGPT2', 'AREG', 'AR', 'BDNF', 'BMP4', 'BTC', 'CBLB', 'CBL', 'CCND1', 'CDH1', 'CSF1', 'CSK', 'CTNNB1', 'DCN', 'DOCK7', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FGF10', 'FGF19', 'FGF1', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FIGF', 'FLNA', 'FOXO3', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IGF1', 'IGF2', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'JAK1', 'JAK2', 'KITLG', 'KRAS', 'LAMA1', 'LAMB1', 'LAMC2', 'MAP2K1', 'MAPK8', 'MET', 'MUC4', 'NGF', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NTF3', 'PA2G4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PRKACA', 'PTEN', 'PTPN11', 'RNF41', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SOX10', 'SRC', 'TGFA', 'VEGFA', 'VEGFB', 'VEGFC', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.5911038471831646 Spearman Correlation: 0.5885325215651557 Coefficient of Determination: 0.3494037581547377 RMSE: 0.38532343191608925 NRMSE: 0.10536051775163152 MAPE: 220.0278368524609 Pearson Correlation: 0.2887342290155734 Spearman Correlation: 0.3027095100936421 Coefficient of Determination: -0.2005979052429887 RMSE: 0.4213921196595176 NRMSE: 0.2074116956294662 MAPE: 233.39127559067202 Predictor: ElasticNet Pearson Correlation: 0.5885019243791787 Spearman Correlation: 0.5880792473845395 Coefficient of Determination: 0.3463337481966491 RMSE: 0.386231487072538 NRMSE: 0.10560881088281933 MAPE: 221.20817468300254 Pearson Correlation: 0.30050227203076585 Spearman Correlation: 0.3131086422523972 Coefficient of Determination: -0.18145239640297506 RMSE: 0.4180187217034638 NRMSE: 0.20575128918744864 MAPE: 230.6229105180998 Predictor: RandomForests Pearson Correlation: 0.5547876126766105 Spearman Correlation: 0.5902516503880699 Coefficient of Determination: 0.2910243708930592 RMSE: 0.4022400388108429 NRMSE: 0.10998609282286206 MAPE: 238.34134072195064 Pearson Correlation: 0.42628279500567845 Spearman Correlation: 0.3530692402648412 Coefficient of Determination: 0.16742561662904665 RMSE: 0.3509127445071989 NRMSE: 0.17272132999315779 MAPE: 242.66558427817895 Fold: 5 Protein: RB1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AATF', 'ABL1', 'AKT1', 'AR', 'ASF1A', 'ATF2', 'BGLAP', 'CASP3', 'CBX4', 'CCNA1', 'CCNA2', 'CCND1', 'CCND2', 'CCND3', 'CCNE1', 'CCNE2', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CEBPA', 'COL1A1', 'CREBBP', 'CTBP1', 'DNMT1', 'DUT', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'ELF1', 'EP300', 'FOXM1', 'FZR1', 'GNB2L1', 'H1F0', 'H2AFV', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC2', 'HDAC3', 'HIST1H2BA', 'HIST2H2AC', 'HIST2H2BE', 'HMGA1', 'HMGA2', 'HSP90AA1', 'ID2', 'JUN', 'MAPK14', 'MAPK1', 'MAPK3', 'MDM2', 'MEF2C', 'NCAPD3', 'NCAPG2', 'NCAPH2', 'NFYC', 'PCNA', 'PML', 'POLA1', 'POLA2', 'PPARA', 'PPARG', 'PPP1CA', 'PPP1CB', 'PPP1CC', 'PPP2CA', 'PPP2CB', 'PRIM1', 'PRIM2', 'RAF1', 'RBBP4', 'RUNX2', 'SIRT1', 'SKP2', 'SMARCA2', 'SMC2', 'SMC4', 'SP100', 'SP1', 'SP3', 'SPI1', 'SUV39H1', 'TAF1', 'TBP', 'TERT', 'TFDP1', 'TP53BP1', 'TP53', 'TP73', 'YAP1', 'ZNF521', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.5069043132899446 Spearman Correlation: 0.4933311406845556 Coefficient of Determination: 0.2569519828319504 RMSE: 0.20162670996648346 NRMSE: 0.0996066207725819 MAPE: 335.8510663566594 Pearson Correlation: 0.13212505004393058 Spearman Correlation: 0.0680781555879749 Coefficient of Determination: -0.9528119081424804 RMSE: 0.33589968237517853 NRMSE: 0.16936232296108472 MAPE: 665.3429629554283 Predictor: ElasticNet Pearson Correlation: 0.5063243161043216 Spearman Correlation: 0.49191629655764796 Coefficient of Determination: 0.2563617590376863 RMSE: 0.20170677293427838 NRMSE: 0.0996461730802717 MAPE: 334.02974395128393 Pearson Correlation: 0.07000308061222699 Spearman Correlation: 0.07462187807828029 Coefficient of Determination: -0.3748518245831953 RMSE: 0.2818430519622905 NRMSE: 0.14210669582432006 MAPE: 641.6012465927183 Predictor: RandomForests Pearson Correlation: 0.5510514394759319 Spearman Correlation: 0.48981283330666364 Coefficient of Determination: 0.16481628290012207 RMSE: 0.21376206347840973 NRMSE: 0.10560166753699417 MAPE: 151.14884520496926 Pearson Correlation: 0.02605859379354594 Spearman Correlation: 0.12342049152732579 Coefficient of Determination: -0.1357599151765001 RMSE: 0.2561666885759467 NRMSE: 0.12916054321841494 MAPE: 299.5254744685065 Protein: CDH1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ACTA1', 'ACTN1', 'ADAM10', 'ADAM15', 'CA2', 'CASP3', 'CBLL1', 'CDC42', 'CDH17', 'CDH3', 'CDH5', 'CTBP1', 'CTNNA1', 'CTNNB1', 'CTNND1', 'CTTN', 'DLG1', 'EFNA1', 'EGFR', 'EGF', 'ENAH', 'EPCAM', 'EPHA2', 'EXOC3', 'EXOC4', 'FER', 'FLOT1', 'FLOT2', 'FMN1', 'FYN', 'GDNF', 'GNA12', 'GNA13', 'HGF', 'HGS', 'IGF1R', 'IGF1', 'IGF2', 'IQGAP1', 'IQGAP2', 'IQGAP3', 'ITGA6', 'ITGAE', 'ITGB4', 'ITGB7', 'AJUBA', 'JUP', 'KIFC3', 'KLK7', 'KLRG1', 'LAMB1', 'LAMC2', 'LIMA1', 'MAPK1', 'MAPK3', 'MEN1', 'MEP1B', 'MET', 'MGAT3', 'MLLT4', 'MMP3', 'MMP7', 'MMP9', 'MYO6', 'NCSTN', 'NUMB', 'PARD6A', 'PIK3CA', 'PIK3R1', 'PIP5K1C', 'PLEKHA7', 'PLG', 'PRKCI', 'PRKCZ', 'PSEN1', 'PVRL1', 'PVRL2', 'RAB5A', 'RAB7A', 'RAC1', 'RAP1A', 'RET', 'RHOA', 'SKIL', 'SMAD3', 'SMAD4', 'SNAI1', 'SNAI2', 'SNAI3', 'SRC', 'STX4', 'TJP1', 'TWIST1', 'VASP', 'VCL', 'YES1', 'ZBTB33', 'ZEB1', 'ZEB2', 'ZYX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.7669918179182277 Spearman Correlation: 0.720670930490041 Coefficient of Determination: 0.5882764487535077 RMSE: 0.7225523535540025 NRMSE: 0.11505244316327544 MAPE: 255.18324945967618 Pearson Correlation: 0.4553244968232057 Spearman Correlation: 0.4506415291961246 Coefficient of Determination: 0.12429579500742693 RMSE: 1.0871527522298368 NRMSE: 0.2137918137755082 MAPE: 1771.7895912820306 Predictor: ElasticNet Pearson Correlation: 0.7423753369290692 Spearman Correlation: 0.7052510560374214 Coefficient of Determination: 0.5499808468575756 RMSE: 0.7554086682204783 NRMSE: 0.12028417378753514 MAPE: 277.9651570576268 Pearson Correlation: 0.43505420326608674 Spearman Correlation: 0.43686080873826355 Coefficient of Determination: 0.12309546140597194 RMSE: 1.0878975808504183 NRMSE: 0.21393828653328714 MAPE: 2113.587495763008 Predictor: RandomForests Pearson Correlation: 0.7799313376460936 Spearman Correlation: 0.7090491909145105 Coefficient of Determination: 0.6035252887651239 RMSE: 0.7090456724260381 NRMSE: 0.11290176625362855 MAPE: 143.65822804362995 Pearson Correlation: 0.6325713228980736 Spearman Correlation: 0.5790421326949216 Coefficient of Determination: 0.39036844945245475 RMSE: 0.9070799546337237 NRMSE: 0.1783799639404778 MAPE: 391.78972810588476 Protein: CDH2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ADAM10', 'AFP', 'AHSG', 'ALB', 'APLP2', 'APOA1', 'APOB', 'APOE', 'APP', 'AXIN1', 'BDNF', 'BMP4', 'BNIP2', 'CALU', 'CDC42', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH17', 'CDH18', 'CDH1', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDON', 'CREBBP', 'CSF1', 'CST3', 'CTNNA1', 'CTNNA2', 'CTNNB1', 'CTNND1', 'CYR61', 'FAM20C', 'FBN1', 'FER', 'FGFR1', 'FN1', 'FSTL1', 'GAS6', 'GJA1', 'GOLM1', 'GPC3', 'GRIA2', 'HSP90B1', 'IGFBP1', 'IGFBP3', 'IGFBP4', 'IGFBP5', 'IGFBP7', 'IL6', 'ITIH2', 'JUP', 'KIF5B', 'KNG1', 'KTN1', 'LAMB1', 'LAMC1', 'LGALS1', 'LRP5', 'LTBP1', 'MAP2K6', 'MAPK11', 'MAPK14', 'MATN3', 'MEF2A', 'MEF2C', 'MEF2D', 'MET', 'MFGE8', 'MSLN', 'NTRK2', 'P4HB', 'PCSK9', 'PIK3CA', 'PIK3R1', 'PTPN11', 'PTPN1', 'RAC1', 'RHOA', 'ROBO1', 'SCG2', 'SDC2', 'SERPINA1', 'SLIT1', 'SNAI1', 'SNAI2', 'SPAG9', 'SPARCL1', 'SPP1', 'STC2', 'TCF3', 'TIMP1', 'TMEM132A', 'TNC', 'VCAN', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.555658426596124 Spearman Correlation: 0.5213035770127588 Coefficient of Determination: 0.30875628704728 RMSE: 0.2985898428211713 NRMSE: 0.146647926340146 MAPE: 654.2223290300105 Pearson Correlation: 0.02533287690562006 Spearman Correlation: 0.017698497111570153 Coefficient of Determination: -0.5005512312930958 RMSE: 0.5109246194136384 NRMSE: 0.19106056855959405 MAPE: 1789.4323099475596 Predictor: ElasticNet Pearson Correlation: 0.5526274836365801 Spearman Correlation: 0.5189956317071208 Coefficient of Determination: 0.30539247510834 RMSE: 0.29931547771003275 NRMSE: 0.14700431104073117 MAPE: 650.9815485563887 Pearson Correlation: 0.04525190481061392 Spearman Correlation: 0.039252408698902945 Coefficient of Determination: -0.4791147196561789 RMSE: 0.5072620188895202 NRMSE: 0.18969093689191713 MAPE: 1372.8620292813212 Predictor: RandomForests Pearson Correlation: 0.5285637165501145 Spearman Correlation: 0.5013115821333234 Coefficient of Determination: 0.18513038283366956 RMSE: 0.3241928972348436 NRMSE: 0.1592224828028307 MAPE: 614.3664363558341 Pearson Correlation: -0.0009606234420610378 Spearman Correlation: 0.05920530082088023 Coefficient of Determination: -0.043030332517606906 RMSE: 0.4259708549107756 NRMSE: 0.15929205725586656 MAPE: 746.8766141129609 Protein: CDH3 Protein Interaction Partners Count: 73 x_train_column_count: 74 x_train columns: ['AIMP1', 'CLMP', 'BRCA1', 'CCND1', 'CD24', 'CD2AP', 'CD44', 'CDCP1', 'CDH10', 'CDH11', 'CDH12', 'CDH13', 'CDH15', 'CDH17', 'CDH18', 'CDH1', 'CDH24', 'CDH2', 'CDH4', 'CDH5', 'CDH6', 'CDH7', 'CDH8', 'CDH9', 'CLDN1', 'CLDN7', 'CTNNA1', 'CTNNA3', 'CTNNB1', 'CTNND1', 'DPYD', 'DSP', 'ECM1', 'EGFR', 'EPCAM', 'ERBB2', 'ESR1', 'ESRP1', 'F11R', 'FN1', 'GALNT6', 'GATA3', 'HOXA9', 'IGF1R', 'ITGA9', 'JUP', 'KIRREL', 'KRT14', 'KRT15', 'KRT17', 'KRT4', 'KRT5', 'KRT8', 'LEF1', 'MKI67', 'NPHS1', 'NPHS2', 'PGR', 'PKP1', 'PKP2', 'PKP3', 'POU5F1', 'S100A4', 'SNAI1', 'SNAI2', 'SYNPO', 'TECR', 'TJP1', 'TP53', 'UMPS', 'VCL', 'ZEB1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.5673091310268193 Spearman Correlation: 0.5626739259885083 Coefficient of Determination: 0.3218396501464047 RMSE: 0.1678037765176248 NRMSE: 0.11772729452041926 MAPE: 709.9636165402015 Pearson Correlation: 0.33118611359422395 Spearman Correlation: 0.42593299168318816 Coefficient of Determination: -0.15607735928300026 RMSE: 0.24019355052722663 NRMSE: 0.21670490578878068 MAPE: 496.54759058397406 Predictor: ElasticNet Pearson Correlation: 0.5658065389190262 Spearman Correlation: 0.5618035194132743 Coefficient of Determination: 0.320126033004005 RMSE: 0.16801565119192527 NRMSE: 0.1178759409496024 MAPE: 716.9821704123757 Pearson Correlation: 0.34764970626183433 Spearman Correlation: 0.4344468135512913 Coefficient of Determination: -0.09842051154880438 RMSE: 0.23412738313567374 NRMSE: 0.2112319518722415 MAPE: 473.90521572143507 Predictor: RandomForests Pearson Correlation: 0.5532215556161209 Spearman Correlation: 0.5652630676722618 Coefficient of Determination: 0.26825766681949326 RMSE: 0.17430691798156686 NRMSE: 0.1222897499449731 MAPE: 575.6799278137305 Pearson Correlation: 0.4392656012482198 Spearman Correlation: 0.4789660718961583 Coefficient of Determination: 0.17143896120733582 RMSE: 0.20334343131470894 NRMSE: 0.18345837775034865 MAPE: 212.27010258558812 Protein: PTEN Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AR', 'BCR', 'CD79A', 'CD79B', 'CDIPT', 'CSNK2A1', 'CSNK2A2', 'CSNK2B', 'DLG1', 'EGFR', 'AGO1', 'AGO2', 'AGO3', 'AGO4', 'FOXO3', 'FOXO4', 'FRK', 'GRB2', 'HRAS', 'INPP4A', 'INPP4B', 'INPP5B', 'INPP5D', 'INPP5J', 'INPP5K', 'INPPL1', 'IPMK', 'IRS1', 'ITGB1', 'ITPKA', 'ITPKB', 'ITPKC', 'MAST2', 'MDM2', 'MDM4', 'MKRN1', 'MTOR', 'MYC', 'NEDD4', 'NOTCH1', 'OCRL', 'OTUD3', 'PARK7', 'PDGFB', 'PDGFRB', 'PI4K2A', 'PI4KA', 'PI4KB', 'PIK3C2A', 'PIK3C2B', 'PIK3C2G', 'PIK3C3', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PIKFYVE', 'PIP4K2A', 'PIP5K1A', 'PIP5K1B', 'PIP5K1C', 'PML', 'PREX2', 'PSMA6', 'PSMA7', 'PSMB9', 'PSMC6', 'PSMD10', 'PSMD5', 'PSME3', 'PTK2', 'RICTOR', 'RNF146', 'ROCK1', 'ROCK2', 'RPS27A', 'RPS6KB1', 'SACM1L', 'SHC1', 'SLC9A3R1', 'SLC9A3R2', 'SOS1', 'STK11', 'STUB1', 'SYNJ1', 'SYNJ2', 'TNKS2', 'TNKS', 'TNRC6A', 'TNRC6B', 'TP53', 'UBB', 'UBC', 'USP13', 'USP7', 'WWP2', 'XIAP', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 0.5881174469723215 Spearman Correlation: 0.5586848407350578 Coefficient of Determination: 0.345882131433241 RMSE: 0.46021558270582497 NRMSE: 0.07195928116735595 MAPE: 723.895089929107 Pearson Correlation: 0.34485272748708545 Spearman Correlation: 0.3926906819287024 Coefficient of Determination: 0.06450642308343335 RMSE: 0.6980392458099197 NRMSE: 0.1350277092637573 MAPE: 491.00478696536743 Predictor: ElasticNet Pearson Correlation: 0.5826648094366551 Spearman Correlation: 0.556690033814081 Coefficient of Determination: 0.33949810379559764 RMSE: 0.46245592447150113 NRMSE: 0.07230958087272318 MAPE: 740.491117990732 Pearson Correlation: 0.34441613033139384 Spearman Correlation: 0.38761331188668197 Coefficient of Determination: 0.06228825823847017 RMSE: 0.6988663222329071 NRMSE: 0.13518769773926553 MAPE: 455.691021695447 Predictor: RandomForests Pearson Correlation: 0.5382352941738403 Spearman Correlation: 0.49365191412785264 Coefficient of Determination: 0.2645819655510754 RMSE: 0.48797823405101676 NRMSE: 0.07630024768212286 MAPE: 299.0596825838686 Pearson Correlation: 0.439603663309399 Spearman Correlation: 0.45668877013383724 Coefficient of Determination: 0.16600123407524892 RMSE: 0.6590860803901359 NRMSE: 0.12749266488512379 MAPE: 346.11339098639877 Protein: BRCA2 Protein Interaction Partners Count: 100 x_train_column_count: 99 x_train columns: ['ATM', 'ATRIP', 'ATR', 'BARD1', 'BLM', 'BRCA1', 'BRIP1', 'SLX4', 'RHNO1', 'RMI2', 'CDK2', 'CDK4', 'CHEK1', 'CHEK2', 'DMC1', 'DNA2', 'EME1', 'EME2', 'EXO1', 'FANCD2', 'FANCE', 'FANCG', 'FANCI', 'GEN1', 'H2AFX', 'HIST1H2BA', 'HIST1H2BB', 'HIST1H2BD', 'HIST1H2BH', 'HIST1H2BJ', 'HIST1H2BK', 'HIST1H2BL', 'HIST1H2BM', 'HIST1H2BN', 'HIST1H2BO', 'HIST2H2BE', 'HIST3H3', 'HUS1', 'KAT5', 'SPIDR', 'MLH1', 'MLH3', 'MND1', 'MRE11A', 'MSH4', 'MSH5', 'MUS81', 'NBN', 'PALB2', 'PARP1', 'PCNA', 'POLD1', 'POLD2', 'POLD3', 'POLD4', 'POLE2', 'POLE3', 'POLE4', 'POLE', 'POLH', 'POLK', 'PSMC3IP', 'RAD17', 'RAD1', 'RAD50', 'RAD51AP1', 'RAD51C', 'RAD51B', 'RAD51D', 'RAD51', 'RAD9A', 'RAD9B', 'RBBP8', 'RFC1', 'RFC2', 'RFC3', 'RFC4', 'RFC5', 'RMI1', 'RPA1', 'RPA2', 'RPA3', 'RPS27A', 'RTEL1', 'SHFM1', 'SPO11', 'SYCP3', 'TEX15', 'TOP3A', 'TOPBP1', 'TP53', 'UBA52', 'UBB', 'UBC', 'WRN', 'XRCC2', 'XRCC3', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.5283753109822056 Spearman Correlation: 0.47990150495199674 Coefficient of Determination: 0.2791804692555424 RMSE: 0.170199690265634 NRMSE: 0.10964708665848544 MAPE: 262.23714076173485 Pearson Correlation: -0.034783854304842605 Spearman Correlation: 0.16798962580580806 Coefficient of Determination: -3.938314990785747 RMSE: 0.36908507624783504 NRMSE: 0.4826849882270778 MAPE: 366.28495746569104 Predictor: ElasticNet Pearson Correlation: 0.521539453096686 Spearman Correlation: 0.4787712863362062 Coefficient of Determination: 0.27197452017510737 RMSE: 0.17104830791895018 NRMSE: 0.11019378831950406 MAPE: 259.8939714357564 Pearson Correlation: 0.18864099321190253 Spearman Correlation: 0.19097245601566107 Coefficient of Determination: -0.5059941748332877 RMSE: 0.20382091040194553 NRMSE: 0.2665545156633041 MAPE: 331.1554705629203 Predictor: RandomForests Pearson Correlation: 0.5357843471418386 Spearman Correlation: 0.4450225492735351 Coefficient of Determination: 0.1737033646751981 RMSE: 0.18222731864142386 NRMSE: 0.11739559906034715 MAPE: 172.61860055586232 Pearson Correlation: 0.1583917764429902 Spearman Correlation: 0.11850771206623525 Coefficient of Determination: -0.057596239752407685 RMSE: 0.17080360790814153 NRMSE: 0.22337488773705816 MAPE: 163.95608134749864 Protein: CDKN2A Protein Interaction Partners Count: 100 x_train_column_count: 100 x_train columns: ['ABL1', 'AKT1', 'ARF1', 'BMI1', 'BRCA1', 'CBX7', 'CCND1', 'CCND2', 'CCND3', 'CCNL1', 'CDC45', 'CDC6', 'CDC7', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2AIP', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CDKN3', 'CEBPB', 'CTCF', 'DAXX', 'E2F1', 'E2F2', 'E2F3', 'EGFR', 'EGR1', 'AGO1', 'AGO3', 'AGO4', 'ERBB2', 'EZH2', 'FOXM1', 'GMNN', 'HDAC1', 'HIF1A', 'HRAS', 'HUWE1', 'IL6', 'KRAS', 'MAPK11', 'MAPK12', 'MAPK13', 'MAPK14', 'MAX', 'MCM10', 'MCM2', 'MCM5', 'MDM2', 'MDM4', 'MGMT', 'MLH1', 'MOV10', 'MRAS', 'MTAP', 'MYCN', 'MYC', 'NPM1', 'NRAS', 'ORC5', 'PIK3CA', 'PIK3R1', 'PTEN', 'RASSF1', 'RB1', 'RPS27A', 'RRAS2', 'RRAS', 'RUNX3', 'SMAD3', 'SMAD4', 'SMARCA4', 'SUMO1', 'SUMO2', 'SUMO3', 'TBX2', 'TERT', 'TFDP1', 'TNRC6A', 'TNRC6B', 'TNRC6C', 'TP53', 'TP63', 'TRIP12', 'TWIST1', 'UBA52', 'UBB', 'UBC', 'UBE2I', 'USP7', 'VEGFA', 'WRN', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 0.7425365803297131 Spearman Correlation: 0.6828404953202836 Coefficient of Determination: 0.5513605731277443 RMSE: 0.4552584123388293 NRMSE: 0.1159273795775074 MAPE: 252.29880528081245 Pearson Correlation: 0.40856772871167196 Spearman Correlation: 0.42302023716006437 Coefficient of Determination: 0.04243236786417348 RMSE: 0.5929541939518579 NRMSE: 0.149204648587569 MAPE: 386.89826308445123 Predictor: ElasticNet Pearson Correlation: 0.7418034609975971 Spearman Correlation: 0.6809885599140829 Coefficient of Determination: 0.5502723354622248 RMSE: 0.45581022438734986 NRMSE: 0.11606789345505586 MAPE: 255.43568998652955 Pearson Correlation: 0.4151730884033548 Spearman Correlation: 0.42813252035561544 Coefficient of Determination: 0.05887288257614931 RMSE: 0.5878419293477252 NRMSE: 0.14791825302526992 MAPE: 275.6516570066027 Predictor: RandomForests Pearson Correlation: 0.7070760359539651 Spearman Correlation: 0.6156068997241199 Coefficient of Determination: 0.495831069043139 RMSE: 0.48261109340110386 NRMSE: 0.12289248896160115 MAPE: 196.31830226324485 Pearson Correlation: 0.38271414956951605 Spearman Correlation: 0.365257964819361 Coefficient of Determination: -0.027691046414497933 RMSE: 0.6142818772439601 NRMSE: 0.154571318598918 MAPE: 458.3069491129188 Protein: TP53 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['AKT1', 'APAF1', 'ATM', 'ATR', 'AURKA', 'AURKB', 'BANP', 'BARD1', 'BAX', 'BBC3', 'BCL2L1', 'BCL2', 'BCL6', 'BRCA1', 'CASP8', 'CCNA2', 'CCNE1', 'CCNG1', 'CDC25C', 'CDK2', 'CDK5', 'CDKN1A', 'CDKN1B', 'CDKN2A', 'CHEK1', 'CHEK2', 'COPS5', 'CREBBP', 'DDB2', 'DDX5', 'DYRK2', 'E2F4', 'EGR1', 'EHMT2', 'EP300', 'EZH2', 'FZR1', 'GADD45A', 'GLS2', 'GSK3B', 'HDAC1', 'HDAC2', 'HIF1A', 'HIPK2', 'HSP90AA1', 'HSPA1A', 'IGFBP3', 'JUN', 'KAT2B', 'KAT5', 'KDM1A', 'MAPK14', 'MAPK1', 'MAPK8', 'MAPK9', 'MAPKAPK5', 'MCL1', 'MDM2', 'MDM4', 'MSH2', 'NGFR', 'NPM1', 'PLK3', 'PMAIP1', 'PPP1R13B', 'PPP1R13L', 'PRKDC', 'PRMT5', 'PTEN', 'RB1', 'RCHY1', 'DROSHA', 'RPA1', 'RRM2B', 'SETD7', 'SETD8', 'SFN', 'SIRT1', 'SMYD2', 'SNAI1', 'SNAI2', 'SP1', 'STAT3', 'STK11', 'SUMO1', 'SUMO2', 'TBP', 'TNFRSF10A', 'TNFRSF10B', 'TP53BP1', 'TP53BP2', 'TP53INP1', 'TP53RK', 'TXN', 'UBE2I', 'USP7', 'WRN', 'XRCC6', 'YY1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.6738138093178628 Spearman Correlation: 0.6342899958074839 Coefficient of Determination: 0.45402504962744916 RMSE: 0.31314109830287173 NRMSE: 0.07964116541694137 MAPE: 961.26459616858 Pearson Correlation: 0.43038602246336893 Spearman Correlation: 0.31346276138106466 Coefficient of Determination: 0.1560391322876863 RMSE: 0.4851935040224068 NRMSE: 0.12995674407992683 MAPE: 247.9918417207136 Predictor: ElasticNet Pearson Correlation: 0.6653711506403951 Spearman Correlation: 0.6269102274080659 Coefficient of Determination: 0.44270698207676074 RMSE: 0.31637015896804527 NRMSE: 0.08046241231161659 MAPE: 889.0923668842141 Pearson Correlation: 0.41600949140559373 Spearman Correlation: 0.3140612725844462 Coefficient of Determination: 0.14452286134359082 RMSE: 0.48849264237538204 NRMSE: 0.13084040240401287 MAPE: 232.55761694407155 Predictor: RandomForests Pearson Correlation: 0.6316797160440648 Spearman Correlation: 0.562487239141467 Coefficient of Determination: 0.34963697457635856 RMSE: 0.3417681858048986 NRMSE: 0.08692189165667963 MAPE: 737.5776386594723 Pearson Correlation: 0.5373916819353073 Spearman Correlation: 0.46615793214379236 Coefficient of Determination: 0.2461220782133937 RMSE: 0.45856862270338944 NRMSE: 0.12282539780457732 MAPE: 181.77701701915015 Protein: CTNNB1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'AKT1', 'APC2', 'APC', 'AR', 'AXIN1', 'AXIN2', 'BCL9', 'BTRC', 'CASP3', 'CBY1', 'CCND1', 'CDC73', 'CDH11', 'CDH17', 'CDH1', 'CDH2', 'CDH3', 'CDH5', 'CDH8', 'CHD8', 'CREBBP', 'CSNK1A1', 'CSNK1E', 'CTBP1', 'CTNNA1', 'CTNNA2', 'CTNNA3', 'CTNNBIP1', 'CTNND1', 'DVL1', 'DVL2', 'DVL3', 'EGFR', 'EGF', 'EP300', 'ERBB2', 'AMER1', 'FBXW11', 'FER', 'FGFR1', 'FOXO1', 'FOXO3', 'FYN', 'FZD1', 'FZD2', 'FZD5', 'GSK3A', 'GSK3B', 'HNF4A', 'IGF1R', 'IQGAP1', 'JUN', 'JUP', 'KDR', 'KLF4', 'LEF1', 'LRP5', 'LRP6', 'MAPK9', 'MEN1', 'MET', 'MMP7', 'MYC', 'NLK', 'NOTCH1', 'PIK3CA', 'PIK3R1', 'PITX2', 'PSEN1', 'PTPN11', 'PTPN1', 'PYGO2', 'RUVBL1', 'SKP1', 'SMAD4', 'SMAD7', 'SMARCA4', 'SOX17', 'SOX2', 'SOX6', 'SOX9', 'SRC', 'TBL1X', 'TCF4', 'TCF7L1', 'TCF7L2', 'TCF7', 'TERT', 'TGFBR1', 'TGFBR2', 'TJP1', 'TLE1', 'VCL', 'VEGFA', 'WNT1', 'WNT3A', 'WNT8A', 'WNT8B', 'YWHAZ', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.6526406893436891 Spearman Correlation: 0.6267146051743737 Coefficient of Determination: 0.42593986938700545 RMSE: 0.57278212337644 NRMSE: 0.1126636749363572 MAPE: 384.1475462062454 Pearson Correlation: 0.45315426459886027 Spearman Correlation: 0.48742503023728484 Coefficient of Determination: 0.11211316467729548 RMSE: 0.6385416144795082 NRMSE: 0.20450411847319142 MAPE: 274.78870185728636 Predictor: ElasticNet Pearson Correlation: 0.6509557044449495 Spearman Correlation: 0.628105791585011 Coefficient of Determination: 0.4237422817557407 RMSE: 0.5738774237491785 NRMSE: 0.11287911560762756 MAPE: 391.45045466449324 Pearson Correlation: 0.46577873601613573 Spearman Correlation: 0.4939837155076748 Coefficient of Determination: 0.14046207713967684 RMSE: 0.6282650760723695 NRMSE: 0.20121287733831117 MAPE: 272.5872368002647 Predictor: RandomForests Pearson Correlation: 0.6500198031853741 Spearman Correlation: 0.6118736664069518 Coefficient of Determination: 0.4116050738445375 RMSE: 0.5798894690380171 NRMSE: 0.11406165795397662 MAPE: 450.9043588685739 Pearson Correlation: 0.6449716017629087 Spearman Correlation: 0.5524033965510792 Coefficient of Determination: 0.4093656974223425 RMSE: 0.5207985071329085 NRMSE: 0.16679482932398212 MAPE: 189.51992936304015 Protein: CCNE1 Protein Interaction Partners Count: 100 x_train_column_count: 101 x_train columns: ['ABL1', 'BARD1', 'BRCA1', 'CABLES1', 'CCNA1', 'CCNA2', 'CCNB1', 'CCND1', 'CCND2', 'CCND3', 'CCNE2', 'CCNH', 'CCT2', 'CCT3', 'CCT4', 'CCT6A', 'CCT7', 'CDC25A', 'CDC6', 'CDK1', 'CDK2', 'CDK3', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDT1', 'CKS1B', 'CKS2', 'CUL1', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'EP400', 'FOXM1', 'HDAC1', 'IFNAR1', 'LIN37', 'LIN52', 'LIN54', 'LIN9', 'MNAT1', 'MYC', 'ORC1', 'ORC2', 'ORC3', 'ORC4', 'ORC5', 'ORC6', 'PCNA', 'PSMA1', 'PSMA2', 'PSMA3', 'PSMA4', 'PSMA5', 'PSMA6', 'PSMA7', 'PSMB1', 'PSMB2', 'PSMB3', 'PSMB4', 'PSMB7', 'PSMC1', 'PSMC2', 'PSMC4', 'PSMC5', 'PSMD10', 'PSMD11', 'PSMD14', 'PSMD1', 'PSMD3', 'PSMD5', 'PSMD6', 'PSMD7', 'PSMD8', 'PSME3', 'PTK6', 'RB1', 'RBBP4', 'RBL1', 'RBL2', 'RHOA', 'RPS27A', 'RRN3', 'SKP1', 'SKP2', 'STAT5A', 'STAT5B', 'TCP1', 'TFDP1', 'TP53', 'TP73', 'UBB', 'UBC', 'WEE1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.8760919073932408 Spearman Correlation: 0.7143342518518204 Coefficient of Determination: 0.7675370301999275 RMSE: 0.21638295783039596 NRMSE: 0.07707318177396116 MAPE: 43.9318270171812 Pearson Correlation: 0.8453919758325757 Spearman Correlation: 0.6564196561054377 Coefficient of Determination: 0.6686447678442942 RMSE: 0.3730665627744195 NRMSE: 0.09003223273268324 MAPE: 86.88761697586091 Predictor: ElasticNet Pearson Correlation: 0.8760407965541864 Spearman Correlation: 0.7140650384450775 Coefficient of Determination: 0.767447313855318 RMSE: 0.21642470902915084 NRMSE: 0.07708805308251143 MAPE: 43.99614400474408 Pearson Correlation: 0.8455213600971019 Spearman Correlation: 0.6561852392174466 Coefficient of Determination: 0.6685767565578137 RMSE: 0.37310484711792474 NRMSE: 0.09004147190142259 MAPE: 86.70899570568818 Predictor: RandomForests Pearson Correlation: 0.8609336470602248 Spearman Correlation: 0.7122151343323968 Coefficient of Determination: 0.7389225050321655 RMSE: 0.22931416406891622 NRMSE: 0.08167913234867898 MAPE: 55.15936379531276 Pearson Correlation: 0.7842409547452408 Spearman Correlation: 0.7298882776945675 Coefficient of Determination: 0.5852977132552424 RMSE: 0.4173569256533583 NRMSE: 0.10072083540153928 MAPE: 77.16026044557881 Protein: CCND1 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ABL1', 'ACTL6A', 'AKT1', 'ARID1A', 'ARID2', 'AR', 'ATF2', 'BRD2', 'BTG2', 'CCNA1', 'CCNB1', 'CCNE1', 'CCNH', 'CDC25A', 'CDK1', 'CDK2', 'CDK4', 'CDK6', 'CDK7', 'CDKN1A', 'CDKN1B', 'CDKN1C', 'CDKN2A', 'CDKN2B', 'CDKN2C', 'CDKN2D', 'CKS1B', 'CREBBP', 'CTBP1', 'CTNNB1', 'CUL1', 'DNMT3A', 'E2F1', 'E2F2', 'E2F3', 'E2F4', 'E2F5', 'AGO2', 'EP300', 'ESR1', 'FOS', 'FOXA1', 'FOXM1', 'GADD45A', 'GATA3', 'GLI1', 'GLI3', 'GSK3B', 'H2AFX', 'H2AFZ', 'HDAC1', 'HDAC4', 'HIST1H2BA', 'HIST2H2BE', 'HNF1A', 'IFNAR1', 'JAK2', 'JUN', 'KAT2B', 'LEF1', 'LYN', 'MAML1', 'MYB', 'MYC', 'NOTCH1', 'PBRM1', 'PCNA', 'PRMT5', 'PSMA6', 'PSMC6', 'PSMD10', 'PSMD6', 'PSMD7', 'PSME3', 'PTK6', 'RASSF1', 'RB1', 'RBL1', 'RBL2', 'RBPJ', 'RELA', 'RUNX1', 'RUNX3', 'SKP1', 'SKP2', 'SMAD4', 'SMARCA4', 'SMARCB1', 'SMARCD1', 'SMARCD2', 'SMARCD3', 'STAT3', 'STAT5A', 'STAT5B', 'STAT6', 'SUV39H1', 'TCF7L2', 'TFDP1', 'TP53', 'WDR77', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.581637001081114 Spearman Correlation: 0.5651662293506254 Coefficient of Determination: 0.33830160102663165 RMSE: 0.18515613714965792 NRMSE: 0.11662056406181216 MAPE: 486.9800805325144 Pearson Correlation: 0.20718830442196332 Spearman Correlation: 0.14077232883203034 Coefficient of Determination: -0.4275247587244806 RMSE: 0.3297131735078099 NRMSE: 0.21064973199154743 MAPE: 242.83042071105587 Predictor: ElasticNet Pearson Correlation: 0.5789190300416985 Spearman Correlation: 0.559508085822626 Coefficient of Determination: 0.33514638848537137 RMSE: 0.18559705720925307 NRMSE: 0.11689827749247522 MAPE: 483.8566056641369 Pearson Correlation: 0.251037067648136 Spearman Correlation: 0.1435554059277547 Coefficient of Determination: -0.03237294428641557 RMSE: 0.28039016874740524 NRMSE: 0.17913786480328978 MAPE: 233.4054403471991 Predictor: RandomForests Pearson Correlation: 0.5428070515055692 Spearman Correlation: 0.5335194938329567 Coefficient of Determination: 0.27263842597056254 RMSE: 0.194125794723969 NRMSE: 0.1222701014839067 MAPE: 489.3038396845265 Pearson Correlation: 0.3811792653654746 Spearman Correlation: 0.3078528704352158 Coefficient of Determination: 0.1401457542174439 RMSE: 0.25589210970831416 NRMSE: 0.1634863531697232 MAPE: 237.6147777677394 Protein: ERBB2 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['ADAM17', 'ADRB2', 'AREG', 'ARHGEF11', 'ARHGEF12', 'BTC', 'CBL', 'CCND1', 'CD44', 'CDC37', 'CDH1', 'CTNNB1', 'CTNND1', 'CUL5', 'DIAPH1', 'DOCK7', 'EGFR', 'EGF', 'ERBB2IP', 'ERBB3', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FYN', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IL6R', 'IL6', 'INS', 'JAK1', 'JAK2', 'KRAS', 'LRPPRC', 'MAP2K1', 'MAPK8', 'MATK', 'MEMO1', 'MUC1', 'MUC4', 'MYC', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NRG4', 'PGAP3', 'PGR', 'PIK3CA', 'PIK3CB', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PLXNB1', 'PRKACA', 'PTEN', 'PTK2', 'PTK6', 'PTPN11', 'PTPN12', 'PTPN18', 'RHOA', 'RHOB', 'RHOC', 'RND1', 'RNF41', 'ROCK1', 'ROCK2', 'RPS27A', 'SEMA4D', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SRC', 'STAT1', 'STAT3', 'STUB1', 'TFAP2A', 'TFAP2B', 'TFAP2C', 'TFF1', 'TFF2', 'TFF3', 'TGFA', 'TP53', 'UBA52', 'UBB', 'UBC', 'VEGFA', 'YES1', 'YY1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.8596579690283965 Spearman Correlation: 0.7133662857427328 Coefficient of Determination: 0.7390118237140273 RMSE: 0.5251336804664479 NRMSE: 0.08946516524974836 MAPE: 582.3846696774953 Pearson Correlation: 0.7137535356492083 Spearman Correlation: 0.5253307397847853 Coefficient of Determination: 0.4416546004644879 RMSE: 0.6483824015192936 NRMSE: 0.14346330379893651 MAPE: 449.45100327158895 Predictor: ElasticNet Pearson Correlation: 0.8595941140230807 Spearman Correlation: 0.7127846661098741 Coefficient of Determination: 0.7389020232916608 RMSE: 0.5252441334330936 NRMSE: 0.08948398273047918 MAPE: 580.1816578807967 Pearson Correlation: 0.7164368384008551 Spearman Correlation: 0.5371812616117408 Coefficient of Determination: 0.44685503544097094 RMSE: 0.6453558173389999 NRMSE: 0.1427936314501604 MAPE: 444.80228876328266 Predictor: RandomForests Pearson Correlation: 0.8487699496163195 Spearman Correlation: 0.6734187187054156 Coefficient of Determination: 0.7161525210070727 RMSE: 0.5476485950410649 NRMSE: 0.09330095150366542 MAPE: 550.5553700816313 Pearson Correlation: 0.7915169947548313 Spearman Correlation: 0.6122250212787255 Coefficient of Determination: 0.6134685784680436 RMSE: 0.5394760258759528 NRMSE: 0.11936630730743507 MAPE: 275.42405340912677 Protein: ERBB3 Protein Interaction Partners Count: 100 x_train_column_count: 102 x_train columns: ['AKT1', 'AKT2', 'ANGPT1', 'ANGPT2', 'AREG', 'AR', 'BDNF', 'BMP4', 'BTC', 'CBLB', 'CBL', 'CCND1', 'CDH1', 'CSF1', 'CSK', 'CTNNB1', 'DCN', 'DOCK7', 'EFNA1', 'EFNA2', 'EFNA3', 'EFNA4', 'EFNA5', 'EGFR', 'EGF', 'ERBB2', 'ERBB4', 'EREG', 'ERRFI1', 'ESR1', 'FGF10', 'FGF19', 'FGF1', 'FGF2', 'FGF3', 'FGF4', 'FGF7', 'FGF9', 'FIGF', 'FLNA', 'FOXO3', 'GAB1', 'GRB2', 'GRB7', 'HBEGF', 'HGF', 'HRAS', 'HSP90AA1', 'IGF1', 'IGF2', 'INS', 'IRS1', 'ITGA6', 'ITGB4', 'JAK1', 'JAK2', 'KITLG', 'KRAS', 'LAMA1', 'LAMB1', 'LAMC2', 'MAP2K1', 'MAPK8', 'MET', 'MUC4', 'NGF', 'NRAS', 'NRG1', 'NRG2', 'NRG3', 'NTF3', 'PA2G4', 'PDGFA', 'PDGFB', 'PDGFC', 'PDGFD', 'PGF', 'PIK3CA', 'PIK3CB', 'PIK3CD', 'PIK3R1', 'PIK3R2', 'PIK3R3', 'PLCG1', 'PLCG2', 'PRKACA', 'PTEN', 'PTPN11', 'RNF41', 'SHC1', 'SHC2', 'SHC3', 'SHC4', 'SOS1', 'SOX10', 'SRC', 'TGFA', 'VEGFA', 'VEGFB', 'VEGFC', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.5705228363124805 Spearman Correlation: 0.5611925319872195 Coefficient of Determination: 0.3254963067540376 RMSE: 0.38510739268551414 NRMSE: 0.10392943207893038 MAPE: 217.3351272821874 Pearson Correlation: 0.4294692409723806 Spearman Correlation: 0.38953353533086454 Coefficient of Determination: 0.06152210266542535 RMSE: 0.4039394419672211 NRMSE: 0.19543817710476916 MAPE: 298.63228587807487 Predictor: ElasticNet Pearson Correlation: 0.5700851423518302 Spearman Correlation: 0.5609907085910523 Coefficient of Determination: 0.32499648348225296 RMSE: 0.3852500531283148 NRMSE: 0.10396793203785613 MAPE: 217.58645147147266 Pearson Correlation: 0.4365535493016929 Spearman Correlation: 0.40038155089215577 Coefficient of Determination: 0.07151684067144515 RMSE: 0.40178271792497255 NRMSE: 0.19439468847369537 MAPE: 298.6251865230155 Predictor: RandomForests Pearson Correlation: 0.5147210501453009 Spearman Correlation: 0.5335315400266676 Coefficient of Determination: 0.24995343811702808 RMSE: 0.4061007596974911 NRMSE: 0.10959493929177434 MAPE: 252.9138531022476 Pearson Correlation: 0.5426444411451047 Spearman Correlation: 0.5956059302485069 Coefficient of Determination: 0.2491498312802708 RMSE: 0.36131074577094974 NRMSE: 0.1748131184663301 MAPE: 231.47616816691362
N Random Genes
ZScore
random_genes.clear()
scenario = Scenario.NRandomGenes_Mutations
normalizeTechnique = NormalizeTechnique.ZScore
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.648331 | 0.348611 | 0.770359 | -0.860535 | -0.0703 | -0.190586 | 0.719543 | 0.931178 | -0.283665 | -0.568745 | ... | 0.238689 | -0.239582 | -0.271725 | -0.222943 | -0.211122 | 0.792968 | -0.619672 | -0.946953 | -0.457066 | 0.454464 |
| TCGA-A1-A0SH-01 | -0.757220 | -0.562180 | -0.708360 | -0.860535 | -0.0703 | -0.190586 | -0.527186 | -0.611509 | -0.283665 | -0.568745 | ... | 0.739490 | -0.107967 | -1.200905 | -0.903627 | 1.252346 | 0.854083 | 0.108510 | -0.031025 | 0.991113 | -0.083768 |
| TCGA-A1-A0SJ-01 | -0.405237 | 0.254851 | -0.925065 | -0.223237 | -0.0703 | -0.190586 | -0.525012 | -0.390046 | -0.283665 | 1.475888 | ... | 0.592975 | 5.821247 | -1.079296 | -0.618408 | 0.444358 | -0.369825 | -0.573411 | -0.555512 | -0.488416 | -0.083768 |
| TCGA-A1-A0SK-01 | 3.940101 | 14.857648 | -0.228301 | -0.311392 | -0.0703 | -0.004913 | -0.697917 | -0.754652 | -0.283665 | -0.568745 | ... | 0.051750 | -0.027856 | 2.390553 | 0.357970 | 1.337526 | -1.597758 | 1.043918 | 0.590450 | -0.467061 | -0.083768 |
| TCGA-A1-A0SQ-01 | -1.114818 | -1.129592 | -0.842620 | -0.860535 | -0.0703 | -0.190586 | -0.507239 | -0.137487 | -0.283665 | -0.568745 | ... | 1.412610 | -0.008283 | -0.929428 | -0.853107 | 0.062384 | -0.434733 | -1.040418 | -0.606257 | -0.580936 | -0.083768 |
5 rows × 20133 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 371 x_train columns: ['TINCR', 'OR4C15', 'TEX9', 'PCGF5', 'LINC00520', 'PEX1', 'GUSBP4', 'RAG1', 'CEACAM20', 'IGSF10', 'TMSB4XP8', 'C16ORF93', 'PKP1', 'RAD21L1', 'SMOC2', 'GINS4', 'ZBED5', 'RBAK', 'SNAR-B2', 'RGL2', 'PCDHA9', 'CAP2', 'ZPLD1', 'COLEC12', 'FAM110D', 'NIT2', 'CD209', 'HCG18', 'FCRL3', 'MAP3K19', 'TOPBP1', 'HIST1H3F', 'BMS1', 'ATAD2B', 'AREG', 'PIN4', 'SLC26A10', 'ENC1', 'DSN1', 'LRRC17', 'TEX36-AS1', 'ALX3', 'TTK', 'PELI3', 'TPTE2P3', 'GOLGA6L1', 'AGTR1', 'CBLL1', 'CDS1', 'CDK14', 'C16ORF70', 'CTAGE4', 'MARVELD2', 'ZRANB2', 'SF3A3', 'ERG', 'CTSG', 'NR4A3', 'KCNJ16', 'SUPT20HL1', 'POU2F2', 'OXTR', 'A4GNT', 'CCDC91', 'PEMT', 'DNAAF5', 'BLID', 'MTUS2', 'NDP', 'ASCL2', 'C1R', 'DSEL', 'RAB40AL', 'BHLHE40', 'VTI1A', 'GGH', 'TCEA1', 'GRIK1-AS1', 'IGF2BP1', 'SERBP1', 'INTS12', 'SNRPB', 'FAM178A', 'COL15A1', 'AMPD1', 'PAK6', 'NPW', 'ZNF676', 'SYNE2', 'IL17D', 'AXIN1', 'NCAPD3', 'POLD3', 'ARHGEF7', 'CCDC39', 'OR9Q2', 'PDP1', 'ULK3', 'IZUMO4', 'CLIP4', 'SOX21', 'KDM6A', 'DNMT3L', 'FXYD6', 'ZC3H12B', 'TM7SF3', 'ASTE1', 'ARFIP2', 'TMEM79', 'QSER1', 'SRXN1', 'PES1', 'TMEM45B', 'RSPH10B2', 'TENM4', 'DHCR7', 'SLC5A9', 'CDC6', 'TAT', 'CHST3', 'EXOSC1', 'SDHAF4', 'PLCE1', 'GKN1', 'HOXB2', 'KRTAP10-11', 'THOC5', 'ERBB2', 'PIFO', 'FRMD3', 'SEMA6C', 'DNAJC5B', 'TRPC5', 'TFAP2C', 'FAM120A', 'PITPNB', 'SLC4A5', 'CCPG1', 'FAM72B', 'RABGAP1L', 'NDUFAF7', 'ABCG2', 'KLRC2', 'ADAMTSL2', 'MORN2', 'PCDHGA11', 'DNAJC18', 'LOC154449', 'IFNE', 'TMEM27', 'SDHAF2', 'TOB2', 'CEP76', 'CFAP221', 'LY6G5C', 'MED25', 'FAM138F', 'NUTM1', 'RGS19', 'SHARPIN', 'RGS2', 'TEX10', 'KLF14', 'ADAMTS16', 'TRIB3', 'CMTR1', 'RPS27L', 'FAM90A1', 'GMEB2', 'PFN2', 'NBR2', 'CCNC', 'ACSM6', 'ARRDC2', 'CFC1B', 'DDX46', 'ADAM28', 'DRG1', 'DDX1', 'YWHAE', 'LRRCC1', 'LSG1', 'PNPT1', 'CRKL', 'B3GALNT2', 'BAIAP2-AS1', 'CDH23', 'COLEC10', 'FBL', 'ADGRF3', 'USP5', 'CEACAM22P', 'NME6', 'BEST2', 'IGFBP3', 'LAMA5', 'ILF3', 'ZNF319', 'CDHR1', 'TXLNB', 'AGAP5', 'DDX20', 'ZCCHC10', 'ACOX2', 'CES3', 'PLA2G2C', 'C10ORF128', 'MYL7', 'PDCD6', 'TNIK', 'LOC286359', 'CCDC168', 'EPM2AIP1', 'STXBP5L', 'HDLBP', 'ABCG1', 'PLXNB3', 'GPR89A', 'DPY19L2P4', 'DUSP12', 'LOC654342', 'ZNF384', 'HIST1H2AE', 'TMEM200B', 'PIK3IP1', 'APOA4', 'GPR4', 'POLR3E', 'NAT8', 'GANC', 'ADIG', 'PREPL', 'RPS3A', 'MORC4', 'PLP2', 'OR2AG2', 'OR5B12', 'LCNL1', 'S1PR3', 'BPIFC', 'BPHL', 'CEP290', 'ANKRD34B', 'ZNF320', 'CASP2', 'SMR3B', 'NLRP3', 'CXADRP2', 'KRT14', 'UBN2', 'EIF3J', 'TBC1D2B', 'KLRC1', 'PDSS2', 'NBPF10', 'LGI3', 'GTF2E1', 'LINC00479', 'MYNN', 'ID2B', 'NUP214', 'C9ORF69', 'USP22', 'FAM65C', 'QRFP', 'WWTR1', 'TRAF3', 'RIMS1', 'CALCB', 'STK19', 'ARL9', 'FBLL1', 'DSG3', 'LONRF3', 'HEATR5B', 'MIPEP', 'SFXN5', 'TIAL1', 'LCE6A', 'MOV10', 'FUT2', 'LYL1', 'SOWAHA', 'ZNF583', 'SCARNA8', 'SHC1', 'SH2D1A', 'UQCR11', 'ROPN1L', 'ADCY10', 'CERS5', 'PAPSS1', 'ZNF81', 'SLC44A1', 'MRPL23', 'CAMK2B', 'LYPD6', 'HHIPL1', 'ADGRG2', 'PSORS1C2', 'XAGE3', 'SEPT7P9', 'AQP1', 'PRR35', 'CAPNS1', 'PCDH18', 'ANKRD34C', 'CRHR1-IT1', 'UGT8', 'TRMT112', 'PDIA2', 'ABCA5', 'MED29', 'HTRA2', 'PLOD1', 'KRBA2', 'TRAF3IP3', 'PDIA3', 'LOC283332', 'STATH', 'EFHC2', 'PIGX', 'C17ORF78', 'IFITM1', 'APOM', 'PRSS38', 'DUS3L', 'ZNF469', 'P2RX3', 'KDR', 'ST8SIA6', 'HOXA2', 'PTBP3', 'C2ORF88', 'SPAG17', 'ABCC4', 'ATP13A4', 'PSMD11', 'TMEM63C', 'TMED8', 'ARMC2', 'TNFRSF14', 'METTL4', 'KCNV2', 'XRCC5', 'GTPBP8', 'GFOD2', 'ARPP19', 'OR4F29', 'ANKRD2', 'RER1', 'TXLNG', 'C11ORF58', 'TTC17', 'CCDC94', 'SNORA21', 'HIST1H2BC', 'RPS12', 'ABCC5', 'KRTAP24-1', 'ECEL1', 'FAM122C', 'NAP1L2', 'ERAP1', 'RAB31', 'TUBB6', 'QSOX1', 'RPS2', 'ZNF593', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.863484828224642 Spearman Correlation: 0.768013450845087 Coefficient of Determination: 0.7456060485741391 RMSE: 0.11303137032554976 NRMSE: 0.04280680565254677 MAPE: 315.7218879315056 Pearson Correlation: -0.01752522653178672 Spearman Correlation: 0.10042434884401524 Coefficient of Determination: -49.307955737646566 RMSE: 1.9892938702864913 NRMSE: 0.9827410275939449 MAPE: 8704.630698329547 Predictor: ElasticNet Pearson Correlation: 0.5348987987105006 Spearman Correlation: 0.43860738776677966 Coefficient of Determination: 0.24799835837286832 RMSE: 0.19433677730289015 NRMSE: 0.07359847653962891 MAPE: 241.19065559555835 Pearson Correlation: 0.338680436866191 Spearman Correlation: 0.3738464540044874 Coefficient of Determination: 0.05530079560158818 RMSE: 0.27260096202471357 NRMSE: 0.13466896648341026 MAPE: 152.55549991384217 Predictor: RandomForests Pearson Correlation: 0.5964733523369095 Spearman Correlation: 0.43190895554369363 Coefficient of Determination: 0.18702010634977562 RMSE: 0.20206239889220837 NRMSE: 0.07652429422162785 MAPE: 186.96731732861338 Pearson Correlation: 0.20576898098914848 Spearman Correlation: 0.29251572104660445 Coefficient of Determination: -0.001360039951794123 RMSE: 0.2806569088733191 NRMSE: 0.13864872513168913 MAPE: 112.92648134728445 Protein: CDH1 x_train_column_count: 836 x_train columns: ['RASD2', 'SAMD15', 'NDP', 'SNX29', 'ERCC6', 'GOLGA2', 'TBC1D22B', 'SAXO2', 'PARP4', 'RUNX3', 'ASF1B', 'VSTM1', 'PAG1', 'TBX10', 'MAD1L1', 'SHC1', 'OMG', 'CDH2', 'CASP10', 'ATP6V1E1', 'TAF1B', 'SYNGAP1', 'CREB3', 'SEC1P', 'GLIPR1L2', 'DSCR10', 'MRPL34', 'TMEM132D', 'SARAF', 'NAA15', 'SERPINB11', 'IGFL2', 'CTNNA3', 'ZNF716', 'NUP35', 'AARS', 'ADGRG1', 'C8ORF37', 'OR7C2', 'NHEJ1', 'SLC30A10', 'SLC26A11', 'SF3A2', 'PRAMEF2', 'LHX9', 'SIGLEC9', 'CHML', 'CFHR1', 'MIF', 'TWISTNB', 'CST13P', 'NTMT1', 'NUDT6', 'PSMD7', 'ZNF354A', 'CROCCP3', 'TMEM215', 'GMPPA', 'RAB34', 'RAD52', 'NXN', 'RNF125', 'RHOBTB1', 'CDPF1', 'CSF3', 'DYX1C1', 'PBX3', 'HIST1H2AC', 'OTOR', 'SERPINB12', 'MRPL54', 'GALNT1', 'SIKE1', 'CFAP221', 'FAM177B', 'GALNTL5', 'RPS20', 'CCT8', 'HILS1', 'FILIP1', 'LOC729609', 'FLJ23867', 'ZNF552', 'PALM', 'UGT2B10', 'STEAP1B', 'STK35', 'KCNT1', 'OR4N2', 'ARPC5L', 'IRF4', 'PCDHGA12', 'MYH8', 'AQP12B', 'C9', 'ATP8B2', 'EDA', 'METRNL', 'NRM', 'RASL11B', 'DDX51', 'RABIF', 'BTG4', 'DNAH1', 'SLMO1', 'RPL18A', 'RNF182', 'TTC22', 'RNFT2', 'FBXW10', 'FBXO22-AS1', 'DEFB135', 'ANAPC15', 'SYT16', 'NKG7', 'CRADD', 'ITGAM', 'CCDC30', 'METTL17', 'UMPS', 'GLTSCR1', 'GNPDA1', 'RNH1', 'MEG3', 'MADCAM1', 'APOM', 'SSUH2', 'SH3BP2', 'GAPDHS', 'PPP1R7', 'STPG2', 'CNKSR3', 'GLMN', 'TRIM8', 'ZFP36', 'RPEL1', 'PRPF19', 'RFX2', 'QRFP', 'ADIRF', 'ANKRD36BP2', 'AKIRIN2', 'KDELR3', 'TMEM56', 'TMPRSS15', 'AMY2A', 'GAS2', 'OR10H3', 'PPP1R21', 'SLC22A13', 'TEX26', 'MLXIP', 'CEP104', 'C20ORF194', 'DHPS', 'ZNF486', 'C11ORF24', 'RAD54B', 'HAUS7', 'SALL3', 'PROK1', 'NFIX', 'EMILIN2', 'EIF4E', 'MSRB2', 'STAM2', 'LINC00264', 'LINC00293', 'NPTX1', 'IFT80', 'SYNPO', 'NDOR1', 'DCLK2', 'ZFPM1', 'ZNF513', 'C20ORF24', 'GIMAP8', 'NPPC', 'IFT140', 'KHDC3L', 'PXDN', 'LRRC37A2', 'TMEM116', 'TYW3', 'AHCY', 'SLC5A12', 'NOSTRIN', 'GNB2', 'BUD13', 'CSF2', 'NNAT', 'TNK1', 'CHST8', 'CNGA2', 'ANKRD23', 'NKAIN2', 'BBS7', 'CCL7', 'AMN', 'YTHDC1', 'ALG1L', 'CDK5RAP3', 'MDC1', 'KRBA2', 'ZFP91-CNTF', 'URM1', 'C9ORF69', 'ARFGAP3', 'OR4F5', 'NRXN2', 'TCERG1', 'APOL2', 'MCM2', 'FLAD1', 'GRIPAP1', 'DNAI2', 'UCKL1', 'SCGN', 'SUPT20HL2', 'HNRNPCL1', 'SNORA49', 'GPR65', 'PDGFB', 'PCYOX1L', 'RPL7', 'KCNA3', 'CDC42BPG', 'TMEM150A', 'UBQLN3', 'CNDP1', 'ELMOD2', 'SPATA3', 'RAD51', 'OR12D3', 'PTH2R', 'SRSF9', 'HCG18', 'TCEAL1', 'DDX53', 'XRCC3', 'TSPAN2', 'FAM208A', 'LGALS4', 'LRRC7', 'FOXS1', 'ZNF251', 'DEFB115', 'WNT11', 'C17ORF77', 'NKX1-2', 'SNORA12', 'DEFB119', 'FMO9P', 'SYS1', 'ME2', 'NFX1', 'PEX2', 'CIAO1', 'PAIP2', 'H2BFM', 'ACSL1', 'TP53BP2', 'C11ORF49', 'APPL2', 'C11ORF71', 'GALNT16', 'LMF1', 'MRO', 'SMPD2', 'PDIA2', 'B3GNT8', 'SSBP3', 'HOOK2', 'HIST1H2BJ', 'SLC17A6', 'RAB3B', 'PDE1A', 'HBP1', 'FRMPD2', 'RNF169', 'FBLIM1', 'TAF6L', 'COL1A2', 'LINC00896', 'SLC4A2', 'LIPI', 'AFF1', 'C17ORF75', 'FBXO21', 'PLLP', 'ADRBK1', 'SRD5A1', 'LOC284441', 'OR52W1', 'SBSN', 'NKRF', 'SAV1', 'CKAP2L', 'CHEK2', 'TRMT1L', 'CSNK2B', 'UGT2B4', 'EML5', 'TUBB4B', 'KLHL7', 'SDSL', 'GOLGA2P6', 'RRAS2', 'ZNF436', 'RFC4', 'OR2C1', 'C15ORF26', 'A1BG-AS1', 'KMT2E', 'RAP1GDS1', 'GPR141', 'ZDHHC16', 'CPSF2', 'LPPR3', 'GCH1', 'TNNT2', 'NAGA', 'FOXK1', 'RAB42', 'GATA1', 'PVALB', 'CLEC2L', 'CYSTM1', 'PSMB7', 'SAMD4A', 'LKAAEAR1', 'PQLC1', 'WASH2P', 'RBMXL3', 'INS', 'DDX3Y', 'PAPOLA', 'TNFSF18', 'USE1', 'SLC5A6', 'SYNE3', 'S100A3', 'DENND4B', 'FAHD1', 'PPP6R2', 'SNORA40', 'SLC25A53', 'TMEM47', 'PIGV', 'GFI1B', 'BARHL2', 'TSPAN12', 'PPP1R13B', 'TMPO-AS1', 'PRPF3', 'SCAMP3', 'DPH2', 'NLGN2', 'NRDE2', 'ZNF487', 'C4ORF32', 'C6ORF89', 'PNN', 'PRRG2', 'TMEM26', 'CECR5', 'POSTN', 'DNAH9', 'FABP6', 'APOBR', 'ABAT', 'KCTD10', 'SCML4', 'PTER', 'SLFN13', 'YME1L1', 'KRTAP24-1', 'CTTNBP2', 'RTF1', 'GTF3C2', 'CHST13', 'HPGDS', 'OR9I1', 'GAPVD1', 'ENAM', 'ITFG2', 'OPRK1', 'PUS3', 'EPPIN', 'SF3B6', 'PCK1', 'PLCG2', 'RPS12', 'PPFIA2', 'MMP1', 'SLC35F6', 'STARD5', 'SFTA2', 'ZNF574', 'MUC21', 'RASGRP2', 'MAP7D1', 'C11ORF16', 'TDRG1', 'SUSD3', 'NDRG1', 'ACTL6B', 'CLEC16A', 'YIF1B', 'CSRNP3', 'LOC100190986', 'MAP3K19', 'SPATA33', 'KISS1R', 'CXCL8', 'VPS36', 'RNF17', 'STEAP3', 'NDUFAF6', 'SNORA5C', 'SLC33A1', 'C15ORF62', 'FAM104A', 'SDS', 'LSM2', 'PELI3', 'PRSS22', 'RAB33B', 'ZNF25', 'WNK3', 'NDUFAF1', 'STK16', 'PTPRC', 'MGC27382', 'PCID2', 'PCDHGC3', 'IHH', 'SCHIP1', 'PGM2L1', 'PABPC1L', 'SNX12', 'NF1', 'GCC2', 'PANX3', 'BIN3', 'XRN2', 'GTF2B', 'RNASEH2B', 'RPL19', 'LINC00696', 'ZNF208', 'TMC3', 'CCDC110', 'CILP2', 'TOR1AIP2', 'MYCNOS', 'SPAG11B', 'RPSAP9', 'INE1', 'TSPYL2', 'HIST1H1D', 'CNNM3', 'BDNF-AS', 'CCT6A', 'NXNL2', 'ZKSCAN2', 'ENC1', 'CD1D', 'ACSS1', 'UNC93A', 'RASAL3', 'COL4A6', 'MPV17L', 'DNM1P46', 'MRS2', 'TBXAS1', 'LPO', 'TMEM81', 'ARF5', 'UST', 'PPP1R1B', 'DSC1', 'WWOX', 'CD99L2', 'SMCR5', 'ADGRF1', 'SNORA71E', 'BTBD6', 'ELK1', 'SMO', 'LRRC57', 'PLAGL2', 'HIVEP2', 'KIAA1551', 'CENPBD1', 'KRTAP19-6', 'IFT88', 'CDKL2', 'RNMT', 'UGCG', 'SCARNA21', 'C6ORF52', 'EHD3', 'GALR1', 'AMH', 'HSPB3', 'COL5A3', 'KLK11', 'CATSPERB', 'NKAP', 'PAPPA2', 'NLN', 'IFNB1', 'LINC00620', 'SFPQ', 'TIMM17A', 'CELA3A', 'CCDC122', 'TMEM252', 'EXT2', 'HS6ST2', 'RMRP', 'NKD2', 'CEACAM4', 'LINC-PINT', 'SMIM10L2A', 'FOXI3', 'IFITM5', 'SREK1', 'MON1A', 'U2AF1', 'CLMN', 'ECHDC3', 'ELK3', 'HMOX2', 'RABGGTA', 'GCLC', 'MOV10', 'CCDC178', 'SERINC2', 'LINC01106', 'KIAA0556', 'CFAP69', 'CTTNBP2NL', 'FBRS', 'FMNL2', 'GFPT1', 'COMMD2', 'OR2Y1', 'GPLD1', 'MEPE', 'ASB16', 'MRAP2', 'TGM7', 'WFDC8', 'EHMT1', 'ADAM2', 'EBP', 'PUS7', 'ADCY1', 'COMT', 'ARRDC2', 'CTSW', 'NOP58', 'FCAMR', 'PPIP5K1', 'MDP1', 'NEGR1', 'DCAF12L2', 'XRCC1', 'INPP5D', 'MTMR4', 'ABT1', 'PHF2P1', 'APOPT1', 'CCDC159', 'NCAPG2', 'ZZZ3', 'DAD1P1', 'CIT', 'SCARNA15', 'TAAR1', 'DLEU2L', 'ZNF768', 'TTC31', 'CCL8', 'TAS1R3', 'MS4A15', 'TMEM225', 'PTPRF', 'LINC01366', 'DTD2', 'C1QTNF9B-AS1', 'PDCD1', 'COL6A4P1', 'ACTA2', 'SPATA31A5', 'OR4K15', 'EIF4G3', 'SLURP1', 'GRSF1', 'SAP30BP', 'GCNT4', 'OR1E2', 'TIGD2', 'SLC6A17', 'CCDC148', 'LINC00936', 'LINC00238', 'MLF1', 'SCG5', 'ITGB3BP', 'PLBD2', 'ABCB7', 'NCR3LG1', 'CCL18', 'CHIA', 'SLC6A12', 'FHL5', 'GPR52', 'RAD1', 'CCDC85C', 'CWC27', 'NUBP1', 'SCARNA18', 'UQCRH', 'CCNC', 'ZC3H7A', 'CANT1', 'MTERF4', 'TGM5', 'FAM195B', 'LINC01020', 'TMBIM6', 'MME', 'IL17RB', 'EIF2AK4', 'SYT17', 'REG1B', 'PTGFR', 'RPN2', 'CAPS2', 'NR2F6', 'C2CD4D', 'LRP12', 'KRT12', 'KIAA1324L', 'CLMP', 'KLF2', 'ZNF286B', 'HGD', 'USP17L9P', 'PLCL1', 'REM1', 'TCF7L1', 'NAALAD2', 'AXIN2', 'CFD', 'HOMEZ', 'GNB1L', 'TH', 'FANCE', 'STAG1', 'UROC1', 'MOB3C', 'OR8B12', 'P2RY4', 'PEX5L', 'STARD7', 'EGOT', 'DNAJC30', 'SNAR-B2', 'TRIT1', 'TIMP3', 'HAND2-AS1', 'RHBDD2', 'COL10A1', 'FAT1', 'C1QTNF9B', 'DEPDC1', 'ONECUT3', 'ANKRD39', 'AK7', 'MARVELD3', 'YLPM1', 'DDX60L', 'GRIN2B', 'RELB', 'SMYD2', 'ANAPC4', 'TRADD', 'STAG3L2', 'OOEP', 'RACGAP1', 'LOC221122', 'GUCY2F', 'TPSB2', 'NXF2B', 'ACAP1', 'OR11H1', 'JADE1', 'MARK2', 'SUPT20HL1', 'RIMBP2', 'KRTAP9-8', 'ZNF578', 'PRDX1', 'IRF2BP1', 'ANTXR1', 'COL8A1', 'PLK5', 'HABP2', 'COQ10A', 'SORCS1', 'XIRP1', 'THBS3', 'NLGN1', 'BPGM', 'ZNF17', 'TPD52L2', 'FAM58A', 'ASIP', 'DVL2', 'ZNF548', 'OR5W2', 'MT1DP', 'DDX39A', 'FAM212A', 'PDIA3', 'DEAF1', 'ADGRG3', 'DEGS2', 'DNALI1', 'SULT2B1', 'SREBF2', 'MMRN1', 'PYCR1', 'ANK3', 'CHRAC1', 'RBX1', 'CLDN9', 'IMPA1', 'SERPINB5', 'PGAM2', 'UBE2N', 'TXNL1', 'RAD9A', 'ZAR1L', 'COL11A2', 'SCAF4', 'OR2B2', 'LETM1', 'GRPR', 'MLEC', 'GALNT11', 'FRMD7', 'RSU1P2', 'ZNF367', 'GRAMD4', 'NUBPL', 'HSPB8', 'MPZ', 'HES4', 'TTC16', 'SFMBT2', 'FLJ42393', 'AP5Z1', 'LRRC3', 'WAS', 'PRMT2', 'TUBA1B', 'TSSC4', 'C5ORF58', 'OR52D1', 'TMEM141', 'MAPK10', 'CXORF56', 'ICAM1', 'ARF4', 'BTBD9', 'C5ORF60', 'OR2M1P', 'GLT6D1', 'RPS9', 'RAB19', 'GYPE', 'ATG12', 'NYX', 'ZNRD1', 'TMF1', 'GAS7', 'C1ORF68', 'SYDE2', 'DDX56', 'EEF2K', 'KRT18P55', 'NDNL2', 'WWC2-AS2', 'RNU4ATAC', 'CSMD1', 'IKZF4', 'CFAP36', 'NDUFS8', 'CETP', 'AXL', 'CYTL1', 'CYP8B1', 'RXFP4', 'LCA5L', 'SHMT1', 'CDH24', 'LTBP2', 'PRR26', 'ATG4B', 'ZMAT1', 'SPECC1', 'ZNF326', 'FAS', 'ARL4C', 'SGPL1', 'SLK', 'C22ORF34', 'CHCHD3', 'CTSA', 'LILRA5', 'GCA', 'AKR1B10', 'CES2', 'FAM160A2', 'MRPL10', 'SLC35A1', 'DNAJA2', 'RBP5', 'ABCD4', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 3.924092629293221e-15 NRMSE: 6.595889649695293e-16 MAPE: 3.907820142399532e-12 Pearson Correlation: 0.34775981318808774 Spearman Correlation: 0.3871671056482295 Coefficient of Determination: -1.4368067536951048 RMSE: 1.811268463613323 NRMSE: 0.2933608343774615 MAPE: 845.8307323659675 Predictor: ElasticNet Pearson Correlation: 0.898959443179695 Spearman Correlation: 0.8688852574162684 Coefficient of Determination: 0.7853049427637495 RMSE: 0.5228609702975946 NRMSE: 0.08788613287237063 MAPE: 348.87839600437826 Pearson Correlation: 0.6073441618365157 Spearman Correlation: 0.5748024582967516 Coefficient of Determination: 0.3390415423448063 RMSE: 0.9433206962437349 NRMSE: 0.15278427913636342 MAPE: 399.0666235310807 Predictor: RandomForests Pearson Correlation: 0.7515071336345002 Spearman Correlation: 0.7061106573814872 Coefficient of Determination: 0.5580187995230874 RMSE: 0.7502000694803628 NRMSE: 0.12609888045322354 MAPE: 202.0392104962204 Pearson Correlation: 0.7619166787462787 Spearman Correlation: 0.7053409423470881 Coefficient of Determination: 0.5738321810445988 RMSE: 0.7574650635143976 NRMSE: 0.12268230111016773 MAPE: 128.53550351407577 Protein: CDH2 x_train_column_count: 474 x_train columns: ['C19ORF12', 'CHTOP', 'DUPD1', 'MT1B', 'SNORD22', 'TMSB4XP8', 'ACOX2', 'TMEM80', 'CCL26', 'LCE1F', 'XPNPEP1', 'CRX', 'NOL6', 'CMTM8', 'ADAM33', 'ABCA8', 'CLPP', 'ZC3H13', 'IL27RA', 'IL1F10', 'SLCO2A1', 'NUP62CL', 'TCP10L', 'KIFC2', 'GPRC5D', 'RNF44', 'CCDC105', 'ZNF444', 'ATP2B2', 'MOBP', 'PSAT1', 'EED', 'VPS26B', 'AACSP1', 'CCRL2', 'RASSF9', 'DUSP28', 'FADS2', 'TAF1D', 'ZKSCAN3', 'C5AR1', 'MPLKIP', 'RFWD3', 'PTRH2', 'OR52B4', 'SLC25A47', 'ANKRD29', 'PPP2R3A', 'KIAA0513', 'EPS15', 'GFPT2', 'COTL1', 'SRSF4', 'MAGEF1', 'SEMA4B', 'TECPR1', 'REXO1', 'ITM2C', 'OR1I1', 'ZIK1', 'PCM1', 'UBL3', 'MEDAG', 'TTYH2', 'MTCH2', 'ANTXR1', 'KCNK12', 'ZNF527', 'ZNF764', 'SLC25A11', 'MSR1', 'FUBP3', 'TLN2', 'UGT1A4', 'ASUN', 'LOC494141', 'MTG1', 'CLEC14A', 'SNX1', 'PRX', 'CHMP1A', 'TRPM7', 'PARP9', 'DCAF13', 'IL18R1', 'KRTAP13-1', 'SAR1A', 'GLT8D2', 'GHRHR', 'CHST6', 'SLC35G2', 'ADIPOQ', 'IQCF6', 'ZNF649', 'TGFBR2', 'PDCD2', 'ITGB7', 'ARG1', 'FSHB', 'SETD8', 'C7ORF72', 'FOXD4L1', 'SSH2', 'CASP6', 'ZNF648', 'OR1S2', 'SLC1A7', 'FUT6', 'PTGER2', 'ACP6', 'C6ORF141', 'ZBTB24', 'AGPAT3', 'GRM7', 'SEMA3E', 'NR6A1', 'AFTPH', 'OR5L1', 'ST3GAL2', 'MED19', 'IDH3G', 'MAP2K3', 'TMEM102', 'KIAA0930', 'SP3', 'ANKLE2', 'KIAA0754', 'RAP2A', 'RBMXL2', 'SNRPD3', 'LINC00847', 'OR10Z1', 'LINC01550', 'CLEC17A', 'FAM179B', 'STAP1', 'TXNDC16', 'PTCHD3', 'RPIA', 'CFAP20', 'TTC17', 'GFAP', 'WHAMM', 'OR2T2', 'CRYGC', 'SRCAP', 'ADGRG4', 'SLC29A4', 'CTSF', 'MUM1L1', 'CETP', 'SAA4', 'ELAC1', 'OR5K2', 'SPC25', 'PDX1', 'ECI2', 'MBOAT7', 'C5ORF51', 'MMRN2', 'OSBPL5', 'CCDC132', 'CAB39L', 'CCNI', 'BTBD10', 'PLA2G5', 'MGAT4A', 'ISG15', 'SAV1', 'PFDN6', 'IRX1', 'GZMH', 'MUC12', 'CYR61', 'R3HDML', 'ZMPSTE24', 'MFSD6L', 'RBM25', 'OTOL1', 'CRY2', 'CITED4', 'SNORD15A', 'UMODL1', 'SOX10', 'AGAP2', 'KRT25', 'FADS1', 'GSK3B', 'DYNC1H1', 'ACSL4', 'PHF11', 'GJB6', 'ABI1', 'BAAT', 'RTKN', 'USP32P2', 'LIMK2', 'C22ORF42', 'DFNA5', 'SCD5', 'RINL', 'APOB', 'SLED1', 'DNASE2B', 'RBM38', 'HELZ', 'CLTCL1', 'FBXO8', 'AAAS', 'OR4C11', 'WWP2', 'CRB3', 'ELMOD1', 'NTM', 'TDP2', 'FNDC5', 'NPNT', 'UBA3', 'RAD9B', 'RPS23', 'DHX29', 'CD248', 'ATF5', 'SNX12', 'CDH13', 'TMEM251', 'TDO2', 'DKK1', 'FER1L5', 'BRMS1L', 'MYH7', 'WBP1', 'HNRNPAB', 'C12ORF54', 'NKAIN4', 'TYW5', 'LRRC41', 'C8ORF34', 'ICOSLG', 'GFM2', 'SPDYE3', 'ZNF589', 'GLTSCR2', 'CT47A7', 'DYNC1I1', 'STK3', 'TTC30A', 'RARS', 'JSRP1', 'RIPK1', 'PXDC1', 'ZRANB3', 'ZBTB48', 'GEMIN8', 'CACTIN', 'RPE', 'SPATA9', 'TSHZ1', 'RGPD8', 'RCHY1', 'MYSM1', 'HOXB13', 'ERP29', 'NTNG1', 'SLC44A5', 'FEZ1', 'ADGRG5', 'PPP1R12B', 'CRACR2B', 'CNDP2', 'PRH2', 'RANBP3L', 'FLJ16779', 'PRR26', 'OR2V2', 'ATP6V1G3', 'FLNC', 'TMEM169', 'CCDC47', 'GPR35', 'TCHHL1', 'SAMD12', 'RBMXL3', 'SCML2', 'MGST3', 'LCE1B', 'TIMM17B', 'AARS2', 'RAPGEF3', 'ATXN1', 'ZBTB32', 'TCP10L2', 'HIST1H4K', 'ANKS3', 'LSM3', 'FAM20A', 'CCDC88A', 'GPC3', 'CNIH3', 'RGS19', 'DNAJA1', 'RPL8', 'SLC25A46', 'PREB', 'DDR1', 'MT3', 'PPP2CA', 'RASSF10', 'SBF1', 'KLHL23', 'LANCL3', 'FAM69B', 'HBM', 'CENPV', 'KHDRBS1', 'RBSN', 'GGTLC2', 'LOC391003', 'KRTAP13-2', 'ST7-AS1', 'TMED5', 'PSMC1', 'THBS4', 'SYNJ1', 'GRN', 'WDR5B', 'SLC22A16', 'PRUNE2', 'CCDC74A', 'PCDHB9', 'OR4C15', 'CLK3', 'GSTA1', 'STKLD1', 'CCDC103', 'PVALB', 'ZNF300', 'BAG2', 'NINJ1', 'FAM161B', 'DNAH3', 'GCM1', 'C17ORF99', 'SP4', 'WNT8B', 'ATP5EP2', 'CDC42BPG', 'WDR38', 'SDHB', 'ZNF526', 'IL25', 'SEMA6A', 'ACOT7', 'SAPCD2', 'PYGM', 'CST9L', 'PGA5', 'UCP2', 'LOC401052', 'SIRT3', 'GNAI3', 'MAN2A1', 'KIF7', 'AP3S1', 'PTPRS', 'TSPAN19', 'PLOD3', 'H2AFJ', 'UVRAG', 'STH', 'FAM216B', 'CRAMP1L', 'BTBD6', 'MN1', 'INSL3', 'TATDN3', 'MYL7', 'RASSF5', 'DRD2', 'RPL17', 'TRIP10', 'CDO1', 'CBLB', 'ARHGAP12', 'RFNG', 'BCL7A', 'SUSD6', 'ASB16', 'CRTC2', 'NME4', 'GTF2H3', 'RPL32P3', 'ANP32E', 'HAR1B', 'CNR2', 'SCUBE2', 'IFNK', 'HMBS', 'UBE3C', 'ZNF687', 'ADAM28', 'ITGA9', 'OR9A4', 'VPS37D', 'TMEM45B', 'PLIN5', 'ERMARD', 'SETX', 'CELF6', 'CYP2C19', 'ZNF304', 'TMEM74B', 'LCNL1', 'SLC35C1', 'LINC00111', 'KLHL15', 'LETM2', 'AFAP1-AS1', 'KIR2DL1', 'NGLY1', 'ZC3H10', 'KHK', 'CREBRF', 'WNT9A', 'BPIFA4P', 'ENC1', 'RPS6KA3', 'TUBB7P', 'CA9', 'GRM5', 'TAF5', 'EXOSC7', 'BCHE', 'OR5T1', 'CCR5', 'OR9Q2', 'OR5AR1', 'NADK2', 'FAM134C', 'PDILT', 'TRPC6', 'ARL17A', 'LHB', 'IGF2', 'DNAJC5', 'OR2M5', 'UBXN11', 'BHLHE40', 'FAM90A1', 'TLN1', 'ROS1', 'DMGDH', 'GPR158', 'SRGAP2', 'PGM2', 'SECISBP2', 'TRIM34', 'LOC646214', 'GREB1L', 'IQCF5', 'TTN', 'NETO1', 'TMEM107', 'RPL23AP64', 'TRIM32', 'PRSS55', 'OR5D16', 'TEX14', 'POLR2L', 'UGT8', 'PCDHA2', 'CMSS1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.9365496747983801 Spearman Correlation: 0.9220706853307252 Coefficient of Determination: 0.8771252933649516 RMSE: 0.1301166088148539 NRMSE: 0.04806902762779665 MAPE: 2314.4335668081167 Pearson Correlation: 0.01737349909360087 Spearman Correlation: 0.023939127889961956 Coefficient of Determination: -105.67262857688182 RMSE: 3.874279229361859 NRMSE: 1.9994215974412235 MAPE: 1356.73187001502 Predictor: ElasticNet Pearson Correlation: 0.6668661517239727 Spearman Correlation: 0.6384213435243296 Coefficient of Determination: 0.38030867600843354 RMSE: 0.29220604546278867 NRMSE: 0.1079497890415087 MAPE: 535.1078107851132 Pearson Correlation: 0.08875768422968915 Spearman Correlation: 0.14181055506779827 Coefficient of Determination: -0.06945346131965047 RMSE: 0.3879228528557148 NRMSE: 0.20019758107845118 MAPE: 143.297660693331 Predictor: RandomForests Pearson Correlation: 0.5818154650356756 Spearman Correlation: 0.5087548077102861 Coefficient of Determination: 0.17399434640673872 RMSE: 0.3373595423333355 NRMSE: 0.12463086233669718 MAPE: 1064.664401969514 Pearson Correlation: 0.20341402126108996 Spearman Correlation: 0.21727148570871138 Coefficient of Determination: 0.03516297699677862 RMSE: 0.3684608925445949 NRMSE: 0.19015373512132677 MAPE: 103.22672471005367 Protein: CDH3 x_train_column_count: 75 x_train columns: ['TMEM180', 'GOLGA7', 'SLC25A52', 'TRAM1L1', 'ZBTB17', 'LRRC10B', 'LINC00483', 'CBX2', 'OSBP2', 'OXCT1', 'PLSCR4', 'HSPBAP1', 'RND3', 'HIST1H4G', 'LETM2', 'BLNK', 'GOLGA8F', 'UBR2', 'PRAMEF5', 'CKS2', 'C22ORF24', 'MTG1', 'SHMT1', 'NAPEPLD', 'SEC14L4', 'WSCD1', 'DAAM1', 'CBX4', 'DAW1', 'ILF3', 'SREK1IP1', 'SNORA45B', 'AHCYL2', 'GPATCH4', 'RNF145', 'UBAP2L', 'ANAPC2', 'IRGM', 'TAPBP', 'TEX43', 'SLC4A10', 'TTC41P', 'DHX29', 'SLC39A14', 'ADCY10P1', 'TCEAL1', 'PHF2', 'IP6K1', 'NUAK1', 'ZDHHC1', 'STRIP1', 'USP35', 'HELQ', 'TTC16', 'MED10', 'FAM26F', 'BEND3P3', 'ENTHD2', 'NDUFV2', 'ZNF800', 'PROL1', 'SHISA7', 'SLCO6A1', 'MYOCD', 'VAMP2', 'SERTAD4-AS1', 'PDE6G', 'MED12', 'CYB561A3', 'PPCDC', 'TBCCD1', 'BCAP29', 'TMEM37', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.5004800527415068 Spearman Correlation: 0.5073384758546126 Coefficient of Determination: 0.25048028319214133 RMSE: 0.18076799972414606 NRMSE: 0.1268226972302759 MAPE: 452.3769414188392 Pearson Correlation: 0.17315353017810547 Spearman Correlation: 0.43467954345917476 Coefficient of Determination: -8.910584321580002 RMSE: 0.6440378225016199 NRMSE: 0.4929451917716817 MAPE: 347.35675923552316 Predictor: ElasticNet Pearson Correlation: 0.44169514319312825 Spearman Correlation: 0.4543098648915606 Coefficient of Determination: 0.17530217763974798 RMSE: 0.18961707605889924 NRMSE: 0.1330310069448415 MAPE: 306.96280765345824 Pearson Correlation: 0.44819461869316857 Spearman Correlation: 0.5059799043995707 Coefficient of Determination: 0.1806473359137436 RMSE: 0.18518132088862438 NRMSE: 0.1417373926633737 MAPE: 223.5955380469684 Predictor: RandomForests Pearson Correlation: 0.5327987289886476 Spearman Correlation: 0.5331082717456519 Coefficient of Determination: 0.21675147408423412 RMSE: 0.18479057403847393 NRMSE: 0.12964484343497357 MAPE: 294.1121007742888 Pearson Correlation: 0.46366584448903486 Spearman Correlation: 0.4963320651643743 Coefficient of Determination: 0.17755828506497884 RMSE: 0.1855300696002618 NRMSE: 0.14200432419213155 MAPE: 282.7610370516241 Protein: PTEN x_train_column_count: 886 x_train columns: ['FAM223B', 'NME2P1', 'ACSL4', 'PMP22', 'HLTF', 'ZMAT3', 'LRRC42', 'GUCY1B3', 'ANKRD37', 'FKTN', 'IL17D', 'MYLK2', 'RD3', 'S100A1', 'GGT3P', 'TNNT3', 'SMOC2', 'S100A9', 'UBE2W', 'BLK', 'LYPLA2', 'SRI', 'PCMTD1', 'OR8D2', 'ZNF705D', 'ZC2HC1B', 'KRBOX4', 'PNMT', 'KRTAP19-3', 'GAGE2B', 'MARCKS', 'NACC2', 'ZNF140', 'GALNT2', 'ABCB8', 'MYL4', 'FOXR2', 'OR51G1', 'SLAMF1', 'CAMK2B', 'MMP10', 'ROBO3', 'NUDT18', 'TMED7', 'TNFAIP8', 'SBNO1', 'RGP1', 'MX2', 'ZNF252P', 'MFAP3L', 'BAGE', 'CDKN3', 'LACC1', 'C10ORF71', 'HSF2BP', 'LINC01587', 'FSIP1', 'PTP4A1', 'PSMC1', 'ACD', 'DNPEP', 'CCDC176', 'PANK3', 'DRAIC', 'OR51F1', 'GJA5', 'TCAF2', 'CNN2', 'KRTAP9-8', 'DMRTB1', 'SNRPD2', 'ATE1', 'RMST', 'MCM3AP-AS1', 'ODF3B', 'RPL23AP64', 'SLC22A2', 'POU2F3', 'GRPEL2', 'EDIL3', 'TP53INP2', 'NNAT', 'ANKRA2', 'DOCK11', 'CCDC185', 'XKR7', 'FAM120AOS', 'ALS2CL', 'EN1', 'ADCY10P1', 'ZSCAN12', 'SNHG20', 'PAEP', 'GPX6', 'SKIDA1', 'DDX56', 'PAX2', 'SMIM11', 'OSBPL7', 'ARPP21', 'ADGRG4', 'RNASEH2C', 'ZNF717', 'PCDHGA10', 'RECQL4', 'GUCY1B2', 'PHKB', 'TSPAN14', 'RSU1', 'REXO1L1P', 'LPCAT3', 'SNORA53', 'PROC', 'OSGIN2', 'ELK4', 'NKAPL', 'SLC6A1', 'NBEAL1', 'CNTFR-AS1', 'HIP1R', 'STOM', 'ZNF668', 'CMTM1', 'LINC00596', 'NLGN4X', 'C1ORF174', 'PGP', 'LBHD1', 'RABGGTA', 'VPS37B', 'XKR3', 'ANO8', 'MFF', 'CALY', 'SMAD1', 'SLC7A5P1', 'AZIN1', 'SYTL3', 'SLC25A51', 'NARS', 'OR6B1', 'MATR3', 'SFTPC', 'FAM60A', 'ZSCAN29', 'FAM138E', 'STUB1', 'FBXL12', 'PSMD5', 'LRRC14', 'VWA5B1', 'LIMK1', 'SUSD2', 'OR6C1', 'KLHL20', 'ARG1', 'CLMP', 'GOLGA8G', 'METTL23', 'OR51B2', 'GLCCI1', 'FAM63A', 'RNFT2', 'VLDLR', 'RNF121', 'ZFAND4', 'SELPLG', 'SEZ6L2', 'ZNF609', 'KCNJ1', 'AEBP2', 'TMEM132B', 'KRT27', 'OR1L8', 'FAM26E', 'ZNF491', 'CFAP43', 'C8ORF46', 'HPRT1', 'ADH7', 'SIPA1L1', 'TMCO5A', 'SLC35A5', 'FBXO41', 'NALCN', 'NAIP', 'TTLL10', 'ZNF137P', 'ZNF182', 'IL17A', 'NEFM', 'HIF1A', 'HACD1', 'LRRTM4', 'KLHL3', 'ELOVL1', 'IL2', 'DAAM2', 'IRF2BPL', 'ZC3H14', 'MLH3', 'TMPRSS5', 'IGSF8', 'KCNE5', 'MAN2B2', 'ADAMTS5', 'SDC3', 'UGT1A6', 'TRAPPC11', 'KIAA1143', 'ANKHD1-EIF4EBP3', 'QTRTD1', 'RSRC1', 'EML6', 'LINC00479', 'PLEKHA8', 'LRTOMT', 'GABRB2', 'MAT2B', 'DOCK10', 'MPLKIP', 'POU3F2', 'EWSAT1', 'SMCO2', 'ZNF33A', 'ZBED9', 'RAB40A', 'GRM5', 'CHAMP1', 'MFAP5', 'ZFYVE28', 'FOXO3B', 'MRPL2', 'BIRC3', 'MRPL9', 'AGA', 'CCR5', 'TBP', 'ARHGAP5-AS1', 'ZPR1', 'TEX13B', 'B9D2', 'GNG13', 'C1ORF168', 'OTOL1', 'NDUFB2-AS1', 'FAM74A1', 'NOTCH3', 'KGFLP1', 'ELK3', 'PITPNM3', 'OR5AR1', 'SNORA54', 'FBXL6', 'EPB41L4A', 'SAMD5', 'MEIS3P1', 'ROBO4', 'SNAP91', 'TDG', 'ZNF641', 'NFIB', 'KCNA2', 'PSG2', 'SDHAF3', 'SACS', 'PAH', 'PIAS3', 'NME1', 'WFDC13', 'SUPT4H1', 'EGFL6', 'SYCE3', 'CACTIN', 'KLF12', 'MDFI', 'OR3A1', 'PARPBP', 'UGT2B7', 'CYP4F8', 'C8ORF74', 'TMEM63A', 'LINC00917', 'ZCCHC14', 'ZNF484', 'MICU3', 'ZNF595', 'LUZP1', 'RPS10', 'KRT26', 'GLYATL1', 'DOCK7', 'HSFX2', 'SFTA3', 'OR5M1', 'PACSIN2', 'CCDC85C', 'APPL2', 'C1ORF226', 'FIRRE', 'GCNT4', 'PIGA', 'CATSPER3', 'LINC01553', 'ZNF77', 'TMEM52B', 'TCHP', 'CHP1', 'LAMA4', 'DEFB131', 'STRADB', 'ITGB5', 'EIF3A', 'BTBD10', 'DTWD2', 'VPS13D', 'TBX19', 'PRDM4', 'RP9P', 'VPS4A', 'TMED10', 'RFK', 'OSTC', 'RPRM', 'FBXW10', 'TMEM205', 'LINGO2', 'ZC3H8', 'USP51', 'NUDT8', 'C1D', 'ABCC13', 'FHL5', 'SLC44A4', 'SYT8', 'DUSP23', 'TSHZ1', 'LINC00092', 'TCAIM', 'FAR2', 'LSMEM2', 'SMARCA4', 'TMEM185A', 'MBNL1', 'XRCC5', 'ZNF75D', 'PRUNE', 'COMMD4', 'PSMG3-AS1', 'FFAR4', 'ZNF763', 'MCM4', 'SOD2', 'OR13A1', 'MXD4', 'ZNF674', 'APOA4', 'NME9', 'TCEAL1', 'LCE1C', 'LNPEP', 'TIMMDC1', 'PGF', 'UNC119B', 'USP27X', 'HAP1', 'FLJ16779', 'SH3BGR', 'SUGCT', 'CTAGE1', 'TBC1D28', 'GPR182', 'NUSAP1', 'MAP3K11', 'XCR1', 'ADIG', 'FERMT3', 'EPDR1', 'SIGLEC9', 'PTX4', 'LINC00961', 'RRAGD', 'UPK3B', 'CST4', 'PTENP1', 'RTN1', 'OR2A12', 'FAM76B', 'TIAM2', 'C4ORF48', 'FBN2', 'PPAPDC1B', 'CCDC67', 'HACD2', 'GML', 'PSMD12', 'FRMD3', 'C20ORF194', 'VWA5B2', 'IL22RA1', 'STAT2', 'RGS9', 'SYT1', 'PDCD6', 'GAGE12D', 'LINC00314', 'ARHGEF19', 'C4ORF22', 'C5ORF52', 'MYNN', 'OR11H12', 'KPTN', 'OR4K17', 'GJD3', 'GMCL1', 'IMMT', 'CCIN', 'LOC100272216', 'RSC1A1', 'CCDC7', 'NDUFV1', 'WDFY1', 'POLB', 'SULT2B1', 'PAX8', 'GMFB', 'C19ORF54', 'RNF111', 'TRIM16', 'SLC14A2', 'ZNF486', 'INSL5', 'SPACA3', 'IGF1', 'ANKHD1', 'FBXL14', 'MBD3L2', 'SPNS2', 'FZD6', 'MIDN', 'MED11', 'ABHD13', 'L2HGDH', 'RSPO1', 'H2BFWT', 'PCDHA9', 'ZIC1', 'HMOX1', 'KIAA1107', 'DCLRE1A', 'LOC100129034', 'OMP', 'FBXL19', 'GALNT6', 'WDR49', 'GPR173', 'NIPA2', 'GHRHR', 'MUC4', 'ACTR1B', 'COLQ', 'RBP3', 'SLC45A3', 'KIF26A', 'CNOT4', 'SLC12A9', 'IMPA1', 'BTNL9', 'LINC01011', 'HCRT', 'RASEF', 'GOLM1', 'SCRN1', 'FAM196B', 'MMEL1', 'ANKRD53', 'THEM6', 'ZYX', 'NCOR1P1', 'ERCC2', 'TMEM206', 'DDIAS', 'ZNF131', 'ADAM29', 'ARHGEF18', 'DAPK2', 'ITPK1', 'WNT8B', 'PDE11A', 'CCNB3', 'NAB1', 'SLC7A2', 'CBWD2', 'GPR162', 'ZEB1-AS1', 'STAC2', 'SSH2', 'GPRASP2', 'AFP', 'LIN7C', 'HFE2', 'USP4', 'UEVLD', 'HHLA3', 'GSK3B', 'FAF1', 'PPIA', 'ATRAID', 'KLHL30', 'LMOD2', 'TMEM14B', 'SETDB2', 'NLRC3', 'RPL13AP17', 'OR5T2', 'PRORSD1P', 'ARRDC5', 'FNDC4', 'SLC25A2', 'NDRG2', 'ACBD6', 'SCRN3', 'BCYRN1', 'SHROOM4', 'TPRN', 'NID2', 'PRB1', 'NUDT13', 'SNAR-I', 'RAB9A', 'SLC22A18AS', 'ALOX5', 'PAX6', 'ZNF766', 'MFSD5', 'WFDC2', 'DOCK9', 'PIGU', 'PTPN12', 'TRPV1', 'GANC', 'SEMA3G', 'TMEM184A', 'PRR22', 'CXORF40B', 'GP9', 'SUFU', 'CDKN1A', 'VOPP1', 'THPO', 'PABPC1L2B', 'PLXNB1', 'CXADRP2', 'MRPL21', 'GCSAM', 'GDPD5', 'APOA5', 'CRISP1', 'GSDMA', 'OR2M7', 'BEX1', 'C8ORF33', 'INTS4P2', 'ZNF180', 'USP47', 'LPAL2', 'EIF2B5', 'LINC00710', 'CADM2', 'PRLR', 'RTN4R', 'SF3A3', 'C1QTNF6', 'TECR', 'BRDT', 'MSTO2P', 'RNASE8', 'CIC', 'GCM2', 'KRTAP1-5', 'ATAD2B', 'MYSM1', 'MYOC', 'SMCR8', 'CKLF', 'C3ORF52', 'PRSS42', 'POTEC', 'ANKRD30BL', 'PCSK1', 'SMPD3', 'CREBZF', 'FGF14', 'ANKRD26P1', 'RFXAP', 'NEURL4', 'HNF1A', 'WDR1', 'TAF7L', 'CYP1A2', 'ISCA1P1', 'SNX7', 'NPY1R', 'AKR1E2', 'CDC40', 'ANKRD22', 'ITPKA', 'HAUS7', 'TRAK2', 'SNORA14A', 'ARHGAP19', 'RILPL2', 'TSPAN8', 'PCDHA7', 'CMSS1', 'NDUFAF2', 'BCAS1', 'GARS', 'RPL26L1', 'SMARCAD1', 'TSC22D4', 'TCP11', 'MRPL16', 'ZEB1', 'STAG3L3', 'MYT1', 'MYOM3', 'ZNF565', 'RCAN2', 'GNL3', 'PAPOLA', 'NFE2L3P2', 'ABCC5', 'PRPS1L1', 'HILPDA', 'ATR', 'ACVR1', 'BCL2', 'MAML1', 'FAF2', 'ARHGEF39', 'DNM1P46', 'LOC100287704', 'PAK4', 'ANGPT1', 'N4BP3', 'POP1', 'ARHGAP22', 'ECM2', 'SNX8', 'TCTEX1D1', 'DLEU2L', 'PKP4', 'LRRC27', 'RAB6C', 'ASAP3', 'PLLP', 'CBLN3', 'PCM1', 'POLR3D', 'DBF4B', 'DST', 'RHPN1', 'TGM5', 'SNORA80A', 'CUBN', 'KLHL33', 'NGLY1', 'CDH16', 'TCEA2', 'RRN3P2', 'AMDHD2', 'CD5', 'CYP24A1', 'CHD7', 'ZNF791', 'DCANP1', 'SCIMP', 'GALNS', 'ZBTB16', 'PSG7', 'TBC1D24', 'NEFL', 'BARD1', 'OR2W3', 'MCM6', 'SLC16A6', 'BAAT', 'RALB', 'MCTS2P', 'HAO1', 'BTBD18', 'GLRX2', 'PDSS1', 'ADAD2', 'VPRBP', 'RNF207', 'TNNC2', 'FAM212A', 'OR5K2', 'SPANXN4', 'PLD4', 'PPAP2B', 'PRAMEF9', 'NDUFB7', 'TRPC4AP', 'GSG2', 'NUDT7', 'SPCS2P4', 'MFSD10', 'SLC18A3', 'ECHDC1', 'SERPINA5', 'TRIM13', 'PBDC1', 'SLC6A4', 'LYPD8', 'PRKCH', 'ADCY5', 'NBEAP1', 'FDX1', 'DCTN4', 'WBSCR27', 'RARRES2', 'CDC14C', 'NUCKS1', 'ALDH1L1', 'FLJ23867', 'OR4C3', 'MDM4', 'RGL4', 'PPAPDC2', 'MOGAT1', 'ADGRB1', 'PLA2G12A', 'CCDC141', 'DUXA', 'TRIM14', 'ATG16L1', 'OR4A47', 'KCTD2', 'ZP2', 'SLC9A3', 'LINC00482', 'YKT6', 'AQP7P1', 'RRM1', 'DKFZP779M0652', 'TCF20', 'TMUB2', 'GJA4', 'SDPR', 'FAM71F1', 'TNRC18', 'GOLT1B', 'CES4A', 'DMBT1', 'MAFA', 'NEURL3', 'CACNA1C', 'PES1', 'DNAJC18', 'DNASE1', 'SPICE1', 'EMP1', 'TMED7-TICAM2', 'MS4A14', 'HCN2', 'NR1H4', 'PDDC1', 'NDUFA5', 'NOS1AP', 'MIMT1', 'RALY', 'APOF', 'NME6', 'TP73', 'PGGT1B', 'CTSV', 'EPB41L4A-AS1', 'C17ORF62', 'TNNI3', 'ASB10', 'UGT2B10', 'ATXN3L', 'SPINK1', 'SYNDIG1', 'SNORD115-7', 'MBD3L5', 'KARS', 'NT5C2', 'MINA', 'TMEM39B', 'MTG1', 'KIF20B', 'RSPH4A', 'ARID2', 'OSBPL1A', 'UCA1', 'HEATR1', 'MESDC1', 'ZG16', 'OR6P1', 'PSME4', 'ARRB1', 'COLEC10', 'YAF2', 'TIMM10', 'TMEM176B', 'BRMS1', 'RNF8', 'UGT8', 'FLG', 'CHMP4A', 'CHD5', 'SLC37A3', 'TBC1D10B', 'GUCY2GP', 'NBR1', 'MNS1', 'TPM4', 'ITLN2', 'RGS17', 'SEMA6A', 'SERF1A', 'IGSF1', 'GDI2', 'C1QTNF8', 'CD14', 'TAS2R38', 'HOXA4', 'MRPS10', 'ALDH8A1', 'BST2', 'RPL22L1', 'LINC00896', 'FAM83H', 'LOC440173', 'ADAM5', 'TMPRSS11D', 'SYK', 'C5ORF38', 'TP73-AS1', 'SCRT2', 'CNBD1', 'FAM222A', 'ASB11', 'NPRL3', 'FAM96B', 'EP400', 'ZNF121', 'PELI1', 'MYEOV2', 'OGFOD3', 'NUDT3', 'BMPR1A', 'CC2D2B', 'CDK1', 'CNDP1', 'HAS2-AS1', 'HOXB9', 'MFSD1', 'KIAA0087', 'MEFV', 'CLK3', 'OR1G1', 'TBPL1', 'A1BG', 'SLC6A20', 'SLC9A8', 'ZNF696', 'ACTL7B', 'PIGK', 'NEK4', 'EDDM3B', 'E2F5', 'SNHG10', 'CASP2', 'ZMIZ1-AS1', 'DYNC1I2', 'MTHFD2L', 'LINC00938', 'LOC730668', 'DDX11L2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 2.4742992690818102e-15 NRMSE: 3.868812866987429e-16 MAPE: 3.260442755045875e-12 Pearson Correlation: 0.1187254056652908 Spearman Correlation: 0.11246219880987222 Coefficient of Determination: -3.6293522596078516 RMSE: 1.0686237997484402 NRMSE: 0.35219293380411315 MAPE: 652.4815005629538 Predictor: ElasticNet Pearson Correlation: 0.847652526433774 Spearman Correlation: 0.812153743959069 Coefficient of Determination: 0.6809290045344282 RMSE: 0.35387248903157914 NRMSE: 0.0553314813590148 MAPE: 532.6129655284977 Pearson Correlation: 0.35402623104912667 Spearman Correlation: 0.44996585698956204 Coefficient of Determination: -0.17306797770316895 RMSE: 0.5379306843601102 NRMSE: 0.17728913201506497 MAPE: 307.4705975440718 Predictor: RandomForests Pearson Correlation: 0.6169558124476396 Spearman Correlation: 0.5650485155816939 Coefficient of Determination: 0.3147661214376486 RMSE: 0.51858810436958 NRMSE: 0.08108640518639355 MAPE: 303.3195027125803 Pearson Correlation: 0.29743410775665713 Spearman Correlation: 0.3151539398649266 Coefficient of Determination: 0.07895830568492479 RMSE: 0.47665524170960766 NRMSE: 0.15709420661446433 MAPE: 188.83766722817342 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['ZNF17', 'PITPNM2', 'TPP2', 'WFDC10B', 'WFDC3', 'LIF', 'LYPD3', 'SPACA3', 'CRP', 'PFKP', 'ZNF213', 'RPS9', 'CTNNBIP1', 'SART1', 'DIMT1', 'BAK1', 'CSTA', 'MAGED2', 'UPP1', 'CMTM5', 'GALT', 'RPSAP52', 'ABCC11', 'TRAF7', 'GPR156', 'LOC399815', 'PDZD8', 'FBXO38', 'ACTR3C', 'LINC01020', 'SHROOM4', 'GSPT1', 'DHX37', 'WDR87', 'FBXL12', 'GPR101', 'DNAH12', 'SDHAF1', 'UBR5', 'HOXA13', 'TONSL', 'OR2M2', 'PLEKHG6', 'LINC00950', 'SYCP1', 'DDX19B', 'ADAMTS18', 'SCYL3', 'CMTR2', 'INS-IGF2', 'TGM4', 'HFM1', 'SLC39A3', 'CASKIN1', 'LILRA3', 'TMEM37', 'TEX9', 'TAF4', 'MTUS1', 'ANKDD1A', 'ONECUT2', 'ABCC6P1', 'RPL13P5', 'ASIP', 'OTOP2', 'C2ORF81', 'TMPRSS6', 'PRB1', 'ATG10', 'ZNF700', 'DEFB109P1', 'COL5A3', 'INPP5B', 'DMP1', 'NFKB1', 'BLZF1', 'HIPK3', 'MST1P2', 'ZNF618', 'RGPD1', 'CYLC1', 'CLDN19', 'CRYM', 'TSR1', 'LRRC75B', 'ATG9B', 'SLC43A2', 'BIRC5', 'TMEM173', 'WBP11P1', 'INPP5E', 'CCDC101', 'LRRC8C', 'C1QTNF8', 'RGS14', 'PEA15', 'GGTLC2', 'GPR18', 'FAM160B2', 'SIX2', 'FASTKD2', 'SEMA3F', 'SUV39H2', 'RNF185', 'FOPNL', 'PGLS', 'GATAD2B', 'MANBA', 'DENND2C', 'TNFSF13B', 'RPL7A', 'ZBP1', 'MAGEC1', 'ACMSD', 'LARS', 'ACOT4', 'SDK2', 'OSBP', 'SKIL', 'DBNDD1', 'ARRDC4', 'FLJ23867', 'FGD3', 'RTN3', 'BRSK1', 'GNL1', 'FAM131C', 'LRRN2', 'TRPM7', 'UBAP2L', 'NKX6-3', 'VAPB', 'UGT2A1', 'PDCD6', 'HMBS', 'PSG10P', 'CPNE9', 'APBA3', 'ANXA10', 'RABGGTB', 'KXD1', 'LAIR2', 'NMD3', 'RTP5', 'PGAM4', 'CNTNAP4', 'GSTTP1', 'CREB5', 'NME5', 'KCTD11', 'STAU2', 'S100A6', 'SLC47A1', 'AXIN1', 'LINC00304', 'OR4X2', 'NFE2L3P2', 'NFKB2', 'BAGE', 'CSNK1G3', 'NOL9', 'C3P1', 'CYP3A4', 'KIF21A', 'LEAP2', 'KRT81', 'PRPS1L1', 'PRAMEF2', 'PPARA', 'C1ORF64', 'ITGAL', 'MYLK2', 'PEX26', 'GUCY1B3', 'OXTR', 'ASAP3', 'SORT1', 'MIR7-3HG', 'GDF3', 'DDTL', 'CENPC', 'RNASE13', 'ZBED8', 'ZNF333', 'LY6G6D', 'METAP2', 'SYT5', 'OSBPL10', 'C1QA', 'ZNF492', 'OR12D2', 'PRKY', 'TMCO4', 'CCNA2', 'CAMK1D', 'NINJ1', 'ICAM3', 'BPIFB4', 'NCOA5', 'RNF222', 'PPP1R3A', 'CYSLTR2', 'EPHB6', 'RPS3A', 'STOX1', 'MEN1', 'XPNPEP1', 'PCLO', 'SNHG20', 'NSDHL', 'KRTAP9-4', 'GOLT1B', 'MTHFD2L', 'PTBP1', 'SCX', 'OR1L4', 'PDC', 'NRADDP', 'TMEM45A', 'TMEM105', 'SAMD14', 'ADGRG5', 'TMPRSS11B', 'C11ORF53', 'APOA1', 'RPS2', 'TRAM1', 'LINC00957', 'ELMOD1', 'HMGCS2', 'TLR1', 'TNFRSF17', 'DNAJB9', 'TBXAS1', 'SPON2', 'CBLL1', 'PRDX2', 'C7ORF61', 'TAAR9', 'HSPA7', 'OR4D9', 'MPND', 'SCTR', 'HSD3B2', 'EXOSC3', 'ACHE', 'ZFP42', 'OTUD5', 'COMMD5', 'PTPRK', 'LYRM1', 'UBE2W', 'PPP6R2', 'EGFR', 'TM4SF4', 'DCTPP1', 'MACROD1', 'ZSCAN29', 'SCNN1B', 'PHF1', 'MAML1', 'TMEM220', 'UBE2U', 'LOC100132831', 'C11ORF68', 'NOP14', 'ST6GALNAC6', 'BRINP3', 'MIS18A', 'DROSHA', 'CPE', 'GSS', 'PLCB4', 'TOX3', 'CLEC4M', 'LRP2', 'C10ORF55', 'BCL6', 'MED25', 'RIOK2', 'CNTRL', 'PPIB', 'KRTAP10-10', 'CPOX', 'DNAJB12', 'MYBL2', 'DBNDD2', 'DUXA', 'MAPT-AS1', 'ACTR1B', 'TUBA1C', 'ZNF678', 'MASP1', 'NUP37', 'EDN1', 'AARS2', 'ZBTB34', 'ZNF608', 'HMOX2', 'BREA2', 'C1ORF204', 'FAM84A', 'IGF2BP2-AS1', 'OR1J4', 'C17ORF50', 'SLC20A1', 'C2ORF16', 'EEF1G', 'WFDC10A', 'ST7', 'FAM99A', 'ASPG', 'RBM4B', 'PLCB1', 'SCN4A', 'DDX5', 'MEP1B', 'PCDHGB1', 'AIG1', 'PROM1', 'ZNF211', 'YTHDF1', 'SMARCAL1', 'GRIK5', 'SLC22A17', 'TPCN2', 'GSTK1', 'IRX4', 'LRRC16A', 'SLC16A3', 'KIAA1644', 'FAM157A', 'LSS', 'RBM10', 'IST1', 'MORF4', 'MYH14', 'FZD4', 'UBQLN1', 'HMGB3', 'NRN1L', 'DTX3', 'P2RY1', 'METTL25', 'ZNF556', 'IRF2BPL', 'OR8K3', 'AAGAB', 'ZNF343', 'TMEM254', 'CCT5', 'LMBRD2', 'CDK17', 'SCGB1B2P', 'SUPT16H', 'RPL10L', 'NDUFS2', 'EFHC1', 'FER1L6', 'RPIA', 'HMBOX1', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.8566048013409039 Spearman Correlation: 0.8210698826435467 Coefficient of Determination: 0.7337717856802892 RMSE: 0.10196207241077909 NRMSE: 0.06595815430296346 MAPE: 208.2641213866098 Pearson Correlation: 0.09918089065048849 Spearman Correlation: 0.02816801795926633 Coefficient of Determination: -5.530106543663289 RMSE: 0.4720723189501546 NRMSE: 0.47245027917349347 MAPE: 1111.0833233757319 Predictor: ElasticNet Pearson Correlation: 0.5242006579508787 Spearman Correlation: 0.49227989215439916 Coefficient of Determination: 0.21763339365248557 RMSE: 0.1747900743375437 NRMSE: 0.11306979567201668 MAPE: 178.08359389127733 Pearson Correlation: 0.24844709257429487 Spearman Correlation: 0.23697473048345888 Coefficient of Determination: 0.04716448658666961 RMSE: 0.18032559318121455 NRMSE: 0.18046996915653982 MAPE: 123.48194227638835 Predictor: RandomForests Pearson Correlation: 0.6127891925488236 Spearman Correlation: 0.5169305814205791 Coefficient of Determination: 0.17292244709579263 RMSE: 0.17971516729825082 NRMSE: 0.11625578467535923 MAPE: 157.2623396401572 Pearson Correlation: 0.28325753541535564 Spearman Correlation: 0.28682358650834233 Coefficient of Determination: 0.05531389453716573 RMSE: 0.17955279320938095 NRMSE: 0.17969655044974076 MAPE: 117.60780966928235 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['PLET1', 'FRAS1', 'LANCL3', 'GIGYF1', 'DGKK', 'MED27', 'RHOU', 'TEX11', 'KIF21A', 'KRTAP5-7', 'CCDC18', 'FAM183CP', 'TRIP12', 'MTUS2', 'CYP46A1', 'ERMP1', 'OR5D13', 'LOC727896', 'GOLT1B', 'GOLGA2', 'RIPPLY3', 'TRIB1', 'CLEC18A', 'LINC01138', 'CA5B', 'MITF', 'DNAAF3', 'SSR2', 'SPATA20', 'CBX7', 'TMC1', 'ALDH5A1', 'CDKN2B-AS1', 'TMED6', 'GNRHR', 'LRTM2', 'APAF1', 'WDR74', 'PEX13', 'ZNF260', 'CCND3', 'PCCB', 'BCL7B', 'RNASET2', 'SNHG11', 'SLC25A32', 'ANKRD20A11P', 'CHD4', 'LINC01558', 'GLIPR1L2', 'DIRC1', 'TRIP6', 'KPNA2', 'RGS14', 'ZFAT-AS1', 'PRIM1', 'MTA3', 'HAS2-AS1', 'PRINS', 'AP5Z1', 'SLAMF6', 'SP1', 'STK24', 'HLA-A', 'PRKACA', 'SCN3A', 'FAM167A', 'HSD17B1', 'FAM21A', 'HTATIP2', 'NBL1', 'SCAMP2', 'GCSAML-AS1', 'ABCB6', 'FAM181B', 'HIST1H2BL', 'KCNC4', 'C7ORF66', 'PREB', 'CYHR1', 'LCK', 'PLEKHN1', 'HMGCS2', 'HYPK', 'ERICH1', 'CA7', 'TMEM104', 'KLC4', 'HAUS6', 'CMTR1', 'WDR63', 'ZNRD1-AS1', 'DDX26B', 'WAPAL', 'CRYBB2', 'WASH2P', 'TSPAN2', 'TSPO2', 'ADAMTSL3', 'EFCAB5', 'GCNT4', 'PIGF', 'HIST1H2BO', 'CTNS', 'PSMD6', 'MAGEB16', 'CCDC74A', 'PSG8', 'SLC19A1', 'JAG1', 'PDZD4', 'CCDC149', 'GTF2E1', 'DHRS11', 'TRAIP', 'JAK3', 'ZNF281', 'GFRA1', 'SCMH1', 'ARMC4', 'CARNS1', 'NOP10', 'PPP1R11', 'CECR5', 'FAM66E', 'ADH7', 'APOE', 'ALS2CR12', 'CSPG4', 'DKFZP434L187', 'CCDC40', 'OR13G1', 'MAPK11', 'EIF3G', 'KCNH4', 'OR11L1', 'FBXL7', 'MND1', 'TSHZ2', 'SPN', 'PPFIA3', 'SEC22B', 'CYP7B1', 'MSRB1', 'SLC9C2', 'AP3D1', 'OR52D1', 'BIN3', 'COL3A1', 'NR0B2', 'FEN1', 'CR1', 'TMEM131', 'TAS1R2', 'PWRN2', 'KLHL41', 'LRRFIP2', 'SLC22A8', 'DICER1-AS1', 'FAM53A', 'KEAP1', 'C20ORF27', 'DEDD', 'SLU7', 'GTF2IRD2B', 'PHKB', 'TMEM88', 'C2ORF72', 'TRIO', 'KDELC1', 'AFF4', 'C4BPA', 'PLRG1', 'TLN2', 'C1QB', 'RNF138P1', 'CYP26B1', 'WIBG', 'BRINP3', 'RPH3A', 'ZNF713', 'VWA5A', 'UGT2B11', 'ABCC12', 'MRPL4', 'MTG2', 'CHST7', 'CENPH', 'ISCA1P1', 'RFNG', 'RANBP6', 'AQP3', 'ZNF501', 'SPAG17', 'ANKRD52', 'ZSCAN25', 'RBM25', 'MYT1', 'NGRN', 'TWSG1', 'VHL', 'PRSS54', 'FAM13A-AS1', 'ATP6V0A1', 'MYLPF', 'GRINA', 'VPREB3', 'FAM180B', 'B3GNT8', 'HDAC9', 'KIAA0226L', 'C6ORF1', 'COBLL1', 'TMEM132A', 'CLDN17', 'PLEKHG1', 'ZNF383', 'FCGR2A', 'HOXD10', 'DNAJC5B', 'XDH', 'VEZT', 'CCDC132', 'AGR2', 'FOXD4L3', 'C22ORF15', 'TPRXL', 'NDUFB6', 'C4ORF27', 'DUSP15', 'TEX29', 'CLK3', 'HABP2', 'LIG1', 'ITSN2', 'RRP7A', 'TBCC', 'HNRNPA1P33', 'FAM96B', 'STON1-GTF2A1L', 'C16ORF13', 'LCAT', 'KLHL12', 'HLA-DOB', 'EP300', 'TRIB3', 'ABCA1', 'SPINK8', 'C15ORF40', 'PCTP', 'HAVCR1', 'STEAP2', 'TRNP1', 'INTS4', 'MTSS1', 'SEC22A', 'SLC23A3', 'MT1E', 'DNTTIP2', 'MAFK', 'HAUS8', 'ERI2', 'APTX', 'AMIGO2', 'HBB', 'CCDC65', 'ARHGAP44', 'FBN3', 'CARD11', 'JSRP1', 'FAM110C', 'GDF2', 'DEPDC5', 'PTGFR', 'DEFB118', 'TMEM132E', 'DENND1B', 'C16ORF82', 'LMBRD1', 'FAM20B', 'SH3GLB2', 'PCSK9', 'SORCS3', 'MDFI', 'CX3CL1', 'KCNU1', 'AREG', 'PRSS58', 'WDFY1', 'ACBD5', 'FOXD4L5', 'CD2AP', 'RBFA', 'SNORA12', 'C9ORF163', 'PSD', 'C3ORF36', 'APOA1BP', 'BCKDHB', 'OR11H6', 'CD209', 'PNLDC1', 'TMEM14B', 'HOOK3', 'HNRNPH1', 'TTC30A', 'GCC1', 'SNORA56', 'GRIN3A', 'RHBDD2', 'LRRC30', 'USP34', 'ANKRD30BP2', 'EIF4A3', 'TRUB1', 'CDCP2', 'IL9', 'FSD2', 'SLC52A2', 'ZNF195', 'LOC145783', 'ZNF821', 'SUOX', 'HADHA', 'SGCG', 'ATP12A', 'LGALS1', 'RPS14', 'CHGB', 'TDRD5', 'CACNA2D2', 'OR5D18', 'RAB4A', 'DHX34', 'LINC00950', 'TRABD2A', 'IKBKE', 'XKR9', 'GSTM2', 'CD320', 'PCAT18', 'SUZ12P1', 'OR2T35', 'TMEM50A', 'RPL23AP7', 'E2F7', 'CASKIN2', 'CYB5D1', 'ST7-OT3', 'KRTAP5-5', 'GNG3', 'GALC', 'EPHB6', 'CAPG', 'RTCA', 'C20ORF24', 'GPHA2', 'ARL14EP', 'LAMTOR3', 'UBE2QL1', 'SCGB1D4', 'ZNF646', 'LINC01550', 'REST', 'FAM182A', 'ADGRF2', 'PLA2G16', 'C21ORF58', 'ITGBL1', 'ZYG11A', 'RSF1', 'CYP4V2', 'FAM86HP', 'TMEM150C', 'RPRD1A', 'CDC27', 'FAM66C', 'IKZF4', 'MGC27382', 'ZNF530', 'SFTPC', 'DNMT1', 'USP17L2', 'ZFP28', 'SMIM7', 'PAN2', 'C19ORF40', 'KIR3DL3', 'FNIP1', 'RAB26', 'FOXI1', 'AIG1', 'HSP90AA1', 'LOC730101', 'IQCA1', 'MAPRE3', 'CYP19A1', 'GBP7', 'CAMKV', 'GPC5', 'ZRANB1', 'CYP2S1', 'AGMO', 'KAT5', 'CDC37L1', 'LHX2', 'NCALD', 'CNGB3', 'KRT38', 'KLHL2', 'RAB25', 'HES4', 'PDE1C', 'RPAP2', 'ZNF692', 'RPA1', 'EFNA4', 'AQP6', 'FAM161A', 'LOC340017', 'BECN1', 'TAS2R4', 'TYMS', 'PCDHB5', 'SLC11A2', 'TDP1', 'PRSS45', 'CDK9', 'ABCB11', 'CYP21A2', 'RAMP3', 'SLC27A4', 'APOC1P1', 'MYO1E', 'WDR90', 'PHLDB3', 'ACRV1', 'MBOAT1', 'TAX1BP1', 'TBC1D26', 'MAGI2', 'BAD', 'CAMK2A', 'PHAX', 'DUSP5', 'IMP3', 'SSTR5', 'LOC100130691', 'COPB2', 'C1QTNF3', 'RBMS2', 'C10ORF105', 'G0S2', 'PPP1R14C', 'FOXO4', 'LAMC3', 'CRYL1', 'GPR32', 'MYO1A', 'KRTCAP3', 'TAGLN2', 'RPS6KA6', 'KRTAP10-1', 'ABCB8', 'KLK1', 'VWC2', 'TMEM214', 'CES4A', 'LOR', 'ARID4B', 'C1QL3', 'LINC01588', 'PRKCI', 'CLDN9', 'RRP1', 'ITGA9', 'ZNF845', 'LRFN4', 'HPS5', 'PLCE1', 'C7ORF60', 'CHCHD4', 'YWHAQ', 'ZNF706', 'CARD6', 'FAM201A', 'TSG1', 'TCEAL1', 'IL23R', 'CNOT3', 'WSCD1', 'MIR99AHG', 'TBL1X', 'C1ORF127', 'SYTL4', 'SSR1', 'C17ORF82', 'SDHC', 'PTRF', 'TMSB15A', 'TEF', 'LINC00479', 'GIMAP2', 'TMEM159', 'TRAM2', 'GNAT1', 'HP', 'FGD4', 'CHST1', 'PMS2P1', 'PRCP', 'AFAP1L1', 'MAST2', 'MSH3', 'ASNA1', 'ZC4H2', 'ENSA', 'PATL1', 'PPWD1', 'DEFB1', 'BRE-AS1', 'ELAVL1', 'SH3RF3', 'SLAMF9', 'NANOG', 'C7ORF57', 'CNIH4', 'LOC391322', 'TCIRG1', 'MAPK4', 'ARGFXP2', 'MAP4K4', 'POM121L8P', 'ACOT11', 'DMRTC1B', 'TAOK1', 'MYPOP', 'AP3M1', 'PLA2G12A', 'LSM1', 'ZNF738', 'ZBTB43', 'HOXD9', 'CIB3', 'ASAP1', 'MMP28', 'GOLGA2P5', 'HMX2', 'KLK8', 'TMEM179B', 'ATP6V1H', 'ARHGAP28', 'CAMSAP1', 'ASPG', 'DPH3', 'LTBR', 'TAF13', 'PRR5L', 'FAM213A', 'RC3H1', 'SOX12', 'ZNF189', 'FBXL5', 'BMS1P5', 'KITLG', 'MIR31HG', 'FAM86EP', 'BRPF3', 'ZDHHC18', 'GMCL1', 'CHN1', 'ANKHD1-EIF4EBP3', 'ACADSB', 'SYT14P1', 'ZBP1', 'CDK12', 'C1QTNF9B-AS1', 'CFHR2', 'DHRS7B', 'ATP5G1', 'PNPLA5', 'B4GALT3', 'KERA', 'CCDC115', 'KRBA1', 'WNT5B', 'SYVN1', 'ATXN3', 'METTL24', 'GTF2I', 'NT5M', 'KIAA1456', 'TBRG4', 'LCE1F', 'UTP14A', 'PEX11B', 'NELFCD', 'PSMA3', 'KIF2A', 'ANO5', 'BRF2', 'TAF1A', 'LINC00442', 'NAA15', 'SLC6A11', 'C2ORF27A', 'PIK3CB', 'SP140', 'SNAR-G1', 'LINS', 'GCHFR', 'FBXO10', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 3.609159662673463e-15 NRMSE: 8.159058805636853e-16 MAPE: 2.48856418068213e-12 Pearson Correlation: 0.2995580569749609 Spearman Correlation: 0.23656228660618478 Coefficient of Determination: -4.891600375184559 RMSE: 1.8128367310646578 NRMSE: 0.48955893358483876 MAPE: 1110.864296228066 Predictor: ElasticNet Pearson Correlation: 0.8429998644356893 Spearman Correlation: 0.8228393611972101 Coefficient of Determination: 0.6796463391715248 RMSE: 0.36377521311567973 NRMSE: 0.08223696464692656 MAPE: 172.71659732662488 Pearson Correlation: 0.6224654607900415 Spearman Correlation: 0.4912008584528339 Coefficient of Determination: 0.37975355817529066 RMSE: 0.588198878774008 NRMSE: 0.15884387760572727 MAPE: 747.6680171819362 Predictor: RandomForests Pearson Correlation: 0.6581737325996043 Spearman Correlation: 0.6091722096645114 Coefficient of Determination: 0.4213899859053436 RMSE: 0.4888900866879677 NRMSE: 0.11052110018943542 MAPE: 165.25254325508584 Pearson Correlation: 0.7087546291749963 Spearman Correlation: 0.6001655963010842 Coefficient of Determination: 0.4560695776280711 RMSE: 0.5508251057272163 NRMSE: 0.1487510412441848 MAPE: 228.33848746670725 Protein: TP53 x_train_column_count: 1002 x_train columns: ['NR1H3', 'UBA7', 'ZKSCAN3', 'METTL5', 'MMP23A', 'RB1CC1', 'GNAS', 'AMFR', 'APOL4', 'KRTAP10-4', 'SPRR2D', 'HIST3H2A', 'TMEM101', 'LOC155060', 'FHL1', 'LENG9', 'TRIM43', 'OR14J1', 'NPPA', 'CYP26A1', 'OPRM1', 'NEUROG2', 'HDAC4', 'CDRT15', 'PBOV1', 'SNORA24', 'SH3GL3', 'ARAF', 'ICAM2', 'MYOG', 'HSF4', 'GMNN', 'IPPK', 'PCGF6', 'NEMF', 'NACAP1', 'TCP11', 'SMAD3', 'CCBL2', 'GNLY', 'TNFRSF21', 'CCL2', 'COL3A1', 'USP49', 'GNB1', 'DGKH', 'POFUT2', 'SLC10A7', 'SPTBN2', 'OSBPL5', 'NPY', 'ADAMTS12', 'IL21', 'RPS19BP1', 'C6ORF201', 'PAIP2B', 'HDLBP', 'MOAP1', 'SGK223', 'SHISA9', 'TRMT10A', 'MZT1', 'CPT1B', 'LYPD2', 'CFAP43', 'SMUG1', 'RPL22L1', 'ENDOU', 'MCF2L2', 'GPNMB', 'TAS2R7', 'ADAMTSL1', 'MAT1A', 'MYH13', 'TDRD6', 'FAM167B', 'CTSO', 'CIAO1', 'C5ORF45', 'USF2', 'FBXL20', 'ANKRD29', 'ATP6AP1', 'CCDC172', 'RPS6KB1', 'PPP1R2P9', 'POU2F1', 'BTG3', 'CWF19L1', 'HHEX', 'ABCC6P2', 'MTF1', 'SPANXC', 'IL13RA1', 'LELP1', 'PPP1R42', 'SDHAF4', 'ILKAP', 'KATNB1', 'C15ORF27', 'MTERF4', 'FKTN', 'MVB12B', 'TNFAIP3', 'DPM1', 'SFRP2', 'PRRT2', 'RAP1A', 'RHOC', 'FAM153A', 'OCIAD1', 'BACE2', 'LILRA5', 'LRRC59', 'P2RY10', 'MAGED2', 'CSNK1E', 'C11ORF52', 'HSD17B14', 'PLK1', 'RNF212', 'ZNF282', 'CHP2', 'ASB12', 'ZFP37', 'LTK', 'MPP5', 'EML4', 'AWAT1', 'SPAG17', 'RNF170', 'QRFPR', 'TEDDM1', 'SNED1', 'CSMD1', 'USP27X', 'PRKAG2', 'LINC01366', 'KLRB1', 'TTTY8', 'MSLN', 'PLK2', 'OR4K13', 'PCNX', 'CYP51A1', 'POLK', 'OR8K5', 'GFAP', 'LOC728743', 'SPATA21', 'TRAIP', 'DCK', 'GPR143', 'LCOR', 'KCNH3', 'VSX1', 'TNN', 'FSTL3', 'AMELY', 'TTTY10', 'AGBL5', 'TAS2R46', 'TMEM200A', 'EYA4', 'MYO9A', 'MRPS2', 'USP51', 'KRTAP12-1', 'LOC152225', 'PRAC1', 'OCA2', 'RNF217', 'PLET1', 'LRRC23', 'CAP1', 'TP53I11', 'AKT3', 'PECR', 'IL18R1', 'TMEM249', 'ZC3H12B', 'STARD5', 'ICOS', 'TOP2B', 'ATP2B2', 'ACOT1', 'ATP5E', 'SLC22A10', 'SRP14', 'CDH26', 'TMBIM6', 'RPA3', 'CACNG5', 'ARL4C', 'ERCC4', 'UST', 'LOC284788', 'STAG1', 'UCKL1', 'ZMYND11', 'KRTAP9-2', 'PDE6A', 'LOC340017', 'EPB41', 'OR12D2', 'ASB16', 'FDCSP', 'CWC27', 'HAS2-AS1', 'VAPA', 'FN1', 'TRAPPC9', 'LINC00964', 'C17ORF82', 'GOLGA6L10', 'ANKRD1', 'RAB22A', 'MIB2', 'LINC01300', 'SFXN2', 'PIN4', 'NOVA1', 'NPHS1', 'KRTAP12-2', 'RASGRP3', 'GSTA5', 'STK4', 'TRPS1', 'DUSP22', 'DKK4', 'SMIM4', 'MEIS1', 'MT1L', 'NT5C', 'NXPH1', 'CMTM6', 'TPRX1', 'ACAD8', 'CASP6', 'ACTN3', 'TBC1D2B', 'TCEANC', 'TUBA3D', 'TBX15', 'OGFRL1', 'TAX1BP3', 'EOMES', 'MKL1', 'RPL13AP17', 'ACVR1B', 'FAM157A', 'PTPRD', 'DENND4A', 'SLC11A2', 'SLC22A1', 'ZNF343', 'UBR7', 'ADGRE4P', 'NABP1', 'PXMP4', 'PAPD5', 'NFYA', 'PPP3CB', 'TMEM2', 'WNK4', 'ABCC11', 'MTG2', 'JAKMIP1', 'S1PR3', 'MCAM', 'UCP3', 'RND3', 'CIRBP-AS1', 'HNRNPDL', 'TDH', 'NOTCH2NL', 'LRP8', 'PRR5L', 'TTC3', 'NBEAP1', 'ISG15', 'CLN5', 'SLC27A1', 'ITGAM', 'SYCE1L', 'PELI3', 'CTXN2', 'THRSP', 'CXCL3', 'MGAM2', 'MYNN', 'FAM3A', 'LYPLA2P1', 'FBXL8', 'SH3TC2', 'COX10', 'ELOF1', 'NKAIN2', 'DCAF7', 'OR2S2', 'CYSRT1', 'ZNF615', 'RECQL4', 'KIAA1755', 'RNF180', 'RAB29', 'DDIT4L', 'STAT6', 'UTS2R', 'ADCY8', 'TCP11L2', 'HEYL', 'DKK1', 'SPTLC1', 'SPRED2', 'CHRNG', 'RALGPS2', 'MBNL1-AS1', 'TWF2', 'SPTB', 'LAD1', 'WEE1', 'UBE4A', 'ST3GAL6', 'ATP6V1E2', 'IFNLR1', 'CCDC28B', 'EIF3I', 'LOC284578', 'HSPA9', 'PGD', 'SLAMF1', 'IMPG1', 'FN3KRP', 'SMC4', 'MSL3P1', 'CAMK2N2', 'KIAA0040', 'SNORA77', 'DGKG', 'AFM', 'ZFAT-AS1', 'SIGLEC17P', 'HSD3B7', 'AQP12A', 'CSE1L', 'MAFB', 'ZNF121', 'HDAC1', 'RASGEF1B', 'ALK', 'SPINK1', 'ARHGEF7', 'BSG', 'IMPA1', 'SMPD1', 'PPP1R1C', 'RPL27A', 'ADGRF2', 'ADARB1', 'FGF13', 'PKIA', 'GPR141', 'ZSWIM6', 'BCL9', 'ELL2', 'SPATA32', 'AKR7A3', 'BRD8', 'GET4', 'SAMD4A', 'PPP1R18', 'LRRC18', 'ATP10D', 'CEP76', 'CD22', 'FRG2DP', 'MEGF6', 'KRTAP12-4', 'LOC541473', 'VIM', 'SPEM1', 'SEMA4B', 'ETF1', 'RBM26', 'SKP2', 'BLOC1S4', 'CYP4F8', 'ITPR2', 'PMF1', 'ASB3', 'URAHP', 'C12ORF54', 'KRT6A', 'TRPC6', 'FUBP1', 'SCYL2', 'NANOS3', 'HAND2-AS1', 'ACER1', 'GOLGA2P5', 'DNASE1L3', 'TSC1', 'RAG2', 'NAB1', 'KCTD18', 'HMMR', 'ZBTB26', 'PTENP1', 'SPINK9', 'MIR99AHG', 'KLHL3', 'C9', 'RAB8B', 'ZNF430', 'GABRE', 'DPPA3', 'TBC1D15', 'PIRT', 'NPPB', 'NPNT', 'SNRNP70', 'NKAP', 'PRMT7', 'LY96', 'CDC14A', 'TMPO', 'LOC100134868', 'MX1', 'FDXR', 'CUL5', 'HIST1H2AK', 'DRD5', 'SH3BGRL3', 'LY6D', 'RAPGEF2', 'APCS', 'MAPT', 'DUSP7', 'LINGO1', 'OSGEPL1', 'HSPA1B', 'TP73-AS1', 'RHOA', 'DNAJC25', 'TINAGL1', 'DOCK6', 'GGA2', 'EXO5', 'YARS', 'RHBG', 'CEACAM21', 'PHF2', 'ECHDC1', 'GPATCH11', 'HOOK2', 'TRIM7', 'PRRG3', 'TBC1D9B', 'FRS3', 'AGTRAP', 'ACTL9', 'CC2D2A', 'USO1', 'SLC25A31', 'MYOCD', 'SCN1B', 'OCLM', 'YY1AP1', 'PDCD2L', 'NXF1', 'FLJ37201', 'MIR7-3HG', 'RBM10', 'ITGAE', 'APOPT1', 'PREB', 'CBX4', 'P3H2', 'CPED1', 'ZNF43', 'KIAA0430', 'TSGA13', 'CKLF', 'IFI30', 'OLFM3', 'DCSTAMP', 'MGAT5B', 'PIH1D1', 'EDC3', 'ZMAT1', 'TBL1X', 'TEF', 'KIAA1715', 'OR5M1', 'FAM102A', 'CENPQ', 'LINC00092', 'RAI1', 'GABRA1', 'CMPK1', 'KRT9', 'OR6C70', 'ABCA5', 'C8ORF34', 'SGCD', 'TESK1', 'ODF4', 'SLC7A8', 'DAXX', 'ADGRG3', 'MUS81', 'NLGN4X', 'DMRTC2', 'RABL2B', 'SATB2', 'PKD2', 'FHDC1', 'WBSCR16', 'ANKRD20A3', 'LOC344967', 'CLPSL2', 'IGSF1', 'GPD1L', 'HACL1', 'KCNJ5', 'ATP12A', 'UGT2A1', 'PSMG3', 'PGPEP1L', 'QTRT1', 'STUB1', 'PSEN2', 'PHF23', 'CPOX', 'WASF2', 'ING1', 'DDX17', 'LUZP6', 'TMEM106A', 'C21ORF2', 'SMAD6', 'NID2', 'RPS2', 'HEBP1', 'CSF1', 'CD84', 'SLC4A2', 'KATNAL2', 'FMO3', 'CALD1', 'KLK10', 'NDUFB10', 'PIN1P1', 'NLRP12', 'FAM173B', 'USP28', 'HSPA12B', 'TRPM7', 'SAMM50', 'MT2A', 'FOXP1', 'FOLR1', 'GPR135', 'RNASE1', 'RAB2B', 'ZNF143', 'ARSG', 'ZNF490', 'EMILIN1', 'SERPINB8', 'RGS22', 'GOLGA7B', 'KIAA1024', 'XCL1', 'STT3B', 'WDR89', 'POLR3F', 'FAM133A', 'CBX6', 'STAG2', 'DIRAS2', 'LINC00937', 'EXTL3', 'C4ORF46', 'GDF2', 'RNF128', 'TNFRSF8', 'STK38', 'ZNF589', 'C2ORF15', 'COMMD2', 'FAM27C', 'KCNT2', 'BPIFC', 'CDRT4', 'ARL13B', 'BAIAP2-AS1', 'CD19', 'OR52K2', 'B3GALNT1', 'KRTAP10-5', 'CH25H', 'APBA2', 'MCF2L', 'ELL3', 'ZNF35', 'RPS6', 'OR2D2', 'KCTD2', 'PLXND1', 'SCML2', 'HDAC3', 'RAB11FIP3', 'MARS', 'SNORA71E', 'METTL21C', 'TK2', 'LINC01098', 'CCL24', 'APPL2', 'PSMC3', 'AFP', 'ARNT2', 'MIR1-1HG', 'CCDC116', 'KDM4A', 'ASIC4', 'SELT', 'ZBTB45', 'SPG7', 'OR6T1', 'SKA3', 'ZNF485', 'TLX1NB', 'TMEM62', 'LINC00662', 'HOMER2', 'PPIC', 'PRELP', 'C1GALT1C1L', 'DPH5', 'TPTE2P6', 'HIST4H4', 'UNC13B', 'RHOB', 'LSR', 'ARHGAP5', 'TMEM216', 'SLC2A6', 'TAS2R5', 'SLC35A5', 'DEFB136', 'MESP1', 'SECISBP2L', 'TMEM200B', 'ZNF157', 'MRPS15', 'SFTPA1', 'ZNF529', 'GOLGA6C', 'C11ORF70', 'CRTAP', 'SMARCC1', 'THYN1', 'ZP1', 'SFTPA2', 'SLC39A7', 'DCP1A', 'PP7080', 'TMIGD2', 'ZSCAN22', 'CHST13', 'KLF10', 'ISM1', 'RARRES3', 'LAX1', 'ACHE', 'NRAS', 'NR1D2', 'SRPX2', 'GABRA3', 'ADGRA2', 'C1ORF64', 'RGS20', 'CT45A4', 'KLF2', 'RPUSD3', 'CXXC4', 'HSPH1', 'GRIA1', 'SZT2', 'PIKFYVE', 'ELMO1', 'RPS27', 'KCNK18', 'CNOT6', 'F8A1', 'CTU2', 'LIPE', 'SFTPB', 'LINC00596', 'NAA35', 'TMEM9', 'EGFR', 'NUCKS1', 'COLCA1', 'PUS10', 'TMPRSS11D', 'WWOX', 'PAXIP1-AS1', 'C11ORF57', 'ESYT2', 'SPARC', 'ELAVL2', 'METTL9', 'ACAP3', 'RASSF2', 'TRIM24', 'TBP', 'SLC25A40', 'CSF3R', 'CFAP74', 'KRTAP10-12', 'S100A12', 'PELI1', 'ASIC3', 'LINC01588', 'ALX1', 'C21ORF33', 'LINC00162', 'NR3C2', 'MC1R', 'HLA-E', 'ARL6IP6', 'HTR1F', 'TYMS', 'IFT46', 'GPRC6A', 'SERTM1', 'CRIPT', 'MIPEP', 'ASB7', 'LINC01102', 'NEK3', 'FLT3LG', 'PLLP', 'DSCR10', 'KRTAP21-1', 'HGS', 'ETFDH', 'NCBP1', 'OR5AS1', 'PSMA2', 'CECR5-AS1', 'PROKR1', 'NFIA', 'GNGT1', 'DMXL2', 'FAM9A', 'ICA1L', 'LDLRAP1', 'GLYATL3', 'TMEM259', 'PSD', 'DCLRE1B', 'SDHAP2', 'SLC41A3', 'JARID2', 'SLC25A11', 'KIF5A', 'HDX', 'NUAK2', 'EBAG9', 'MESP2', 'SLC15A4', 'XYLT2', 'PKP2', 'ABCD1', 'MR1', 'ST7-OT4', 'BACH2', 'KLHL23', 'LOC644936', 'CD1A', 'PRAME', 'MGAT4C', 'GNA12', 'OSBPL7', 'SMCR8', 'TST', 'SPANXN1', 'FAM167A-AS1', 'MFHAS1', 'HIST1H3J', 'ZNF232', 'CDKN2A-AS1', 'SEC23IP', 'DGKE', 'EPHA1', 'FOLR3', 'GATC', 'ACSF3', 'RPL23', 'FCRL3', 'FBXO42', 'RAD21', 'LOC285074', 'ARHGAP11A', 'C1QTNF4', 'MAGEB2', 'NEUROD2', 'AKR1D1', 'SYT11', 'SOX21', 'TRIM2', 'TPD52L2', 'ASH1L', 'ATIC', 'B3GALNT2', 'HSD17B7P2', 'PIK3CB', 'CYP19A1', 'EME1', 'MOK', 'SLC6A20', 'ZNF443', 'STX6', 'OR10C1', 'UIMC1', 'HPCAL4', 'FZD4', 'ACTC1', 'TRIML1', 'UBASH3B', 'ZYG11B', 'ANP32C', 'CDC34', 'IYD', 'GSTM2', 'SIX6', 'ANKFN1', 'EZH1', 'C11ORF1', 'PKP3', 'SNAR-C4', 'CLPS', 'GUCY1A3', 'ZNF845', 'ARFGEF3', 'NFKB2', 'ZNF71', 'GNAL', 'ARGFX', 'TECTA', 'IKBKB', 'WDR37', 'TCTEX1D4', 'FEZF1', 'FBXO15', 'ZBTB22', 'LRRN3', 'KRTAP2-1', 'OSTM1', 'BNIP2', 'SLC27A6', 'KMT2B', 'ANP32AP1', 'EPYC', 'COL9A2', 'NSMCE4A', 'PIGF', 'HSPD1', 'RGCC', 'PSMA5', 'SOX2', 'MKLN1', 'ZNF264', 'CNTFR-AS1', 'C16ORF58', 'ADGRA3', 'FAM183CP', 'IFRD1', 'TAS2R30', 'JHDM1D-AS1', 'POLE', 'KDELR2', 'ZNF321P', 'MSN', 'DGUOK', 'NIF3L1', 'LVRN', 'IFRD2', 'FAS', 'HIST1H4F', 'IL1R2', 'KLF7', 'CRHBP', 'PLP1', 'ARID3B', 'NIP7', 'TFR2', 'FAM104A', 'LINC00950', 'NSUN7', 'IQCJ', 'B4GALT7', 'GLUD2', 'TBX22', 'FKBP9', 'C9ORF43', 'ZNF138', 'GMIP', 'KLHL15', 'ARAP3', 'JAZF1', 'SALL3', 'SASH3', 'AVPR1B', 'CSRNP1', 'GCSAM', 'POLD4', 'SF3B3', 'ELK3', 'ELAVL4', 'NCSTN', 'UNC5D', 'YIPF6', 'OR51G1', 'CPSF3L', 'RUSC1-AS1', 'C19ORF44', 'CIDEB', 'TMEM160', 'GNG3', 'TGM7', 'SSR3', 'DZIP1', 'RCBTB2', 'SLC26A1', 'PPM1B', 'DERL2', 'PRSS37', 'EXOSC8', 'PRPF38A', 'ELF1', 'SNORD22', 'SNORA5A', 'HSD11B1L', 'NOL8', 'LMBR1L', 'DSG2', 'LYL1', 'PIPSL', 'MACROD2', 'CEP97', 'GAS8', 'TCF7', 'CORO1A', 'PRR16', 'TMX1', 'POLR2M', 'NDUFA13', 'PIP5KL1', 'CD4', 'DNAAF3', 'NUDT6', 'C7ORF73', 'PRR23C', 'H3F3B', 'CCBL1', 'EXOC3L1', 'SETDB2', 'FAM214A', 'OR51F1', 'RHOBTB2', 'SEC23B', 'MAP1LC3B2', 'IL3RA', 'CCL16', 'TFB1M', 'WASF1', 'FAM71F1', 'WDR18', 'PPP1CA', 'B3GAT3', 'CLEC4D', 'CRY2', 'RNLS', 'PCDHA12', 'C17ORF59', 'TEFM', 'ERRFI1', 'ZNF781', 'AJUBA', 'ZNF815P', 'SFMBT1', 'SLC25A6', 'SERP2', 'LOC100192426', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.6152254776207155e-15 NRMSE: 3.881820422063724e-16 MAPE: 5.866128594065752e-12 Pearson Correlation: 0.19614803923900997 Spearman Correlation: 0.20737489025460934 Coefficient of Determination: -1.3166495508440854 RMSE: 0.6402332845213446 NRMSE: 0.23022520929243936 MAPE: 1627.6675658621741 Predictor: ElasticNet Pearson Correlation: 0.8565059233168921 Spearman Correlation: 0.7659870357690653 Coefficient of Determination: 0.6945857962504036 RMSE: 0.2502475322730053 NRMSE: 0.06014119977721829 MAPE: 397.1457212112076 Pearson Correlation: 0.505804263467874 Spearman Correlation: 0.4528924007413911 Coefficient of Determination: 0.2345572955082572 RMSE: 0.3680140691028902 NRMSE: 0.13233631885464786 MAPE: 419.67043681894125 Predictor: RandomForests Pearson Correlation: 0.6544697563502465 Spearman Correlation: 0.5129193209782342 Coefficient of Determination: 0.37174413280036567 RMSE: 0.3589165336208425 NRMSE: 0.08625727796703739 MAPE: 588.9941486901123 Pearson Correlation: 0.5015794121679428 Spearman Correlation: 0.5069895619939518 Coefficient of Determination: 0.24741224083460067 RMSE: 0.36491074622217834 NRMSE: 0.1312203769363078 MAPE: 331.72405438847125 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['SMPDL3B', 'INHBC', 'LIPK', 'TOMM70A', 'GAB3', 'CGNL1', 'ARGFXP2', 'CMTM6', 'TFB2M', 'SPINK13', 'KCNJ1', 'GEM', 'TMEM39B', 'ZNF24', 'ERBB4', 'PZP', 'OLMALINC', 'THBS4', 'PNO1', 'FBXL13', 'MGC16275', 'TSGA10IP', 'EFCAB1', 'EIF2B1', 'DDX31', 'ANTXR1', 'TBX5', 'DLC1', 'STXBP1', 'ATP5G2', 'TCEANC2', 'POLA1', 'PDXDC2P', 'ZFHX4-AS1', 'USP37', 'FKBP2', 'CSNK1G2', 'PRSS3P2', 'DGKI', 'FOLR1', 'TMEM57', 'VENTX', 'USP25', 'SRRD', 'PRDM13', 'EPHB4', 'SPOCK1', 'SGCB', 'ZIM2', 'SLC39A11', 'ZNF224', 'INSRR', 'CARNS1', 'CHD6', 'EPS15', 'LAPTM5', 'XRCC6P5', 'CCNYL1', 'FAM43A', 'PQLC2L', 'DOHH', 'CCT6B', 'TRIM22', 'PLCB3', 'GLYR1', 'SMEK3P', 'MCCC1', 'SFSWAP', 'FGFR1', 'SLC20A1', 'LRRC39', 'PCDH9', 'KBTBD7', 'QSER1', 'ZSCAN20', 'DEFB126', 'ATG3', 'FAM76B', 'THAP2', 'OR52N1', 'MTR', 'SDC1', 'SLC7A8', 'SSMEM1', 'NR5A1', 'UBXN2A', 'KCNIP1', 'ATP8B1', 'PMVK', 'TXNL4B', 'ZDHHC4', 'HOXA4', 'SMAD6', 'CTSC', 'GPR75', 'MTERF3', 'TVP23A', 'ASH2L', 'WNT10B', 'GAS7', 'C18ORF42', 'GPR137C', 'QTRTD1', 'LOC728392', 'GORASP1', 'SOGA3', 'SCYL3', 'RCE1', 'EFEMP2', 'WEE2-AS1', 'ALG5', 'MRC1', 'POLE', 'USP39', 'MS4A8', 'RAB3D', 'BNIP3L', 'SUPT5H', 'PNMAL2', 'CAD', 'ANKRD45', 'PCAT18', 'FOXN4', 'NCDN', 'PMCH', 'C8B', 'TM9SF4', 'NAP1L6', 'NR5A2', 'CEP112', 'ADCK5', 'MND1', 'C9ORF129', 'TMPRSS9', 'OR1M1', 'MOB3B', 'C3ORF67', 'ZNF449', 'GBP7', 'LRR1', 'DYM', 'FBXO43', 'HSD17B10', 'REV3L', 'ZNF256', 'WNK1', 'IQGAP2', 'EGFL7', 'OR9Q1', 'C20ORF195', 'SFRP5', 'AP4S1', 'ZNF322P1', 'KRTAP21-1', 'RBM14', 'PAH', 'SELENBP1', 'PARD6G-AS1', 'CRISP2', 'GOLGA6B', 'CUEDC2', 'CTBP2', 'INSC', 'COMMD5', 'FAM185A', 'CAPN11', 'MRPS16', 'NEUROG3', 'HLA-DOB', 'ARID4A', 'PSMD12', 'ERF', 'LRRC15', 'DEGS2', 'CDK1', 'HJURP', 'CYBA', 'CYTL1', 'ABCC8', 'TMED6', 'WDR55', 'CCDC110', 'TPSAB1', 'KCTD11', 'PLCXD3', 'OR10S1', 'CHRNB3', 'LEFTY2', 'TNFRSF10B', 'LZTFL1', 'MFSD2B', 'FAM58A', 'ZNF853', 'MAP3K14-AS1', 'PI4KAP1', 'NUP155', 'TIMM22', 'TAS2R30', 'TMF1', 'MCEE', 'PRMT1', 'PRG3', 'ZNF493', 'WLS', 'PRR18', 'ASB12', 'MYL6', 'FAM71E2', 'SMC1A', 'VGF', 'JAKMIP3', 'ZSCAN26', 'TRMT44', 'PHPT1', 'GFRAL', 'TMEM181', 'C14ORF93', 'CAMKMT', 'ABT1', 'KCNRG', 'SYNJ2', 'KRTCAP2', 'LOH12CR1', 'AAED1', 'ATP5C1', 'HABP2', 'LMNTD2', 'RNF186', 'MYO1E', 'MBD5', 'LINC00922', 'SNRNP35', 'CD160', 'RPLP1', 'EFNB2', 'OSMR', 'TRIM29', 'NELFB', 'PRSS12', 'PTCHD3', 'LEO1', 'C22ORF34', 'SERPINB1', 'NAV2', 'FXR2', 'ATM', 'PROSER2', 'LHCGR', 'PALMD', 'TRIM60', 'ARHGDIB', 'STARD6', 'KRTAP10-6', 'IFT43', 'POLR3K', 'MAP3K15', 'LINC00189', 'NUDT1', 'NSUN5', 'CLEC1B', 'NAGLU', 'FAM149A', 'IGIP', 'PDLIM3', 'MAPKAPK3', 'C4ORF45', 'L1CAM', 'HIST1H2AA', 'HIST1H1C', 'C9ORF114', 'CAMKK1', 'MEF2BNB-MEF2B', 'VENTXP7', 'NDUFB4', 'IL12A', 'SAMD1', 'KATNAL2', 'GCLC', 'LINC00294', 'ING3', 'G6PC3', 'CFI', 'DHRS7', 'TRIM75P', 'CDH11', 'RELT', 'LOC285847', 'MMP28', 'RPL13P5', 'TOMM7', 'CCNY', 'HAND1', 'CELP', 'RNASE13', 'AMN1', 'KDR', 'CTPS1', 'CPA5', 'MED10', 'MLIP', 'TRABD2A', 'NOP16', 'IVNS1ABP', 'EIF4G3', 'INAFM1', 'NINL', 'RPS3', 'NUTM2A-AS1', 'RABAC1', 'EMX1', 'KLK4', 'KCNG3', 'IFNW1', 'PART1', 'GABRE', 'ADGRD1', 'GGA1', 'SLC26A1', 'MOV10', 'SPTBN4', 'TMEM127', 'SNORA44', 'RNF145', 'TMEM169', 'CT47B1', 'B2M', 'NEK3', 'PAAF1', 'SMG1P3', 'AGRP', 'ZNF561', 'IKBKB', 'C19ORF33', 'CCDC66', 'DDX24', 'ANKRD44', 'F2RL3', 'DMXL1', 'MDN1', 'LOC553137', 'VPS41', 'CEACAM22P', 'AARSD1', 'PRKCDBP', 'DNAJC17', 'AHNAK2', 'KIAA2013', 'ZNF345', 'HHIPL2', 'ITGB1BP1', 'BAIAP2-AS1', 'USP33', 'SEC24C', 'HDAC8', 'OR7G2', 'KCNIP2', 'CRAT', 'SLC2A4RG', 'TMEM140', 'ANKEF1', 'SNX10', 'SLC2A5', 'KIF3B', 'KCNK9', 'CCDC67', 'ALDH1A2', 'RETN', 'RAB2B', 'AGBL3', 'SDR39U1', 'CEP57', 'A2M-AS1', 'BUD13', 'SOX2-OT', 'WFDC9', 'MAML1', 'NTRK1', 'CACHD1', 'ARPC3', 'ZNF429', 'ZNF841', 'TPK1', 'FNDC3A', 'CDH10', 'PNLIPRP2', 'AQP8', 'PROSER1', 'SWI5', 'SLC38A3', 'TWF2', 'GOLGA2P5', 'ABCA13', 'WDFY2', 'FAM71E1', 'ANO8', 'ATP5G1', 'NDUFB1', 'UNC5C', 'MAGI1', 'LINC00602', 'FAM90A7P', 'SLC25A2', 'SAMM50', 'TMEM248', 'TBC1D16', 'HS6ST3', 'MCMBP', 'LILRA6', 'SHISA6', 'LAMTOR3', 'CIPC', 'COPE', 'ARID2', 'TUBA3E', 'KLHL35', 'ASB17', 'SLC45A3', 'ZNF699', 'ARHGEF25', 'CSTF2T', 'ZNF138', 'PTDSS2', 'ZNF101', 'C22ORF15', 'GPR171', 'SEPT2', 'ADAL', 'CCDC169', 'MTVR2', 'LRP12', 'NELL1', 'PARG', 'BRDT', 'SNAPC5', 'PAFAH1B3', 'LRRC32', 'SPANXN1', 'CHST3', 'MARCH5', 'DUSP7', 'CLDN7', 'ATP5L', 'PAX2', 'KRTAP10-9', 'RAD51D', 'SLTM', 'B4GALT6', 'PRAF2', 'GRXCR2', 'ANKRD55', 'FICD', 'VAMP3', 'PRKAR2A', 'PFAS', 'HLA-DRB5', 'PIR', 'ZNF426', 'EPN1', 'WNT7A', 'LY6G6E', 'FEZF2', 'USP3', 'SHROOM2', 'MRPL42', 'NEUROD1', 'CYP4F2', 'OR6C75', 'ZMAT4', 'CCDC171', 'LBX2-AS1', 'BCL2L2', 'KCNN1', 'THAP5', 'DIAPH2', 'PLTP', 'LINC01144', 'KLHDC9', 'PNMAL1', 'AMMECR1L', 'SEPT4', 'PCDH20', 'CBLN4', 'ICMT', 'AGAP3', 'KRTAP27-1', 'TMEM42', 'OR4F17', 'HLA-DQA1', 'TH', 'DCAF11', 'SPHK2', 'CXADRP3', 'FOXO1', 'CELA1', 'SNORA70B', 'MED7', 'SERPINB5', 'ADAMTSL3', 'CGB2', 'CNST', 'HSF2', 'CAPSL', 'C19ORF66', 'TMEM138', 'ANKRD33', 'USP5', 'ABCA2', 'TIMM10', 'EMC8', 'MARCKS', 'SRXN1', 'INPPL1', 'MBLAC1', 'LAS1L', 'SNX2', 'TDH', 'SBNO1', 'RNF13', 'TEX29', 'TTLL5', 'GMPR', 'DHDDS', 'ARHGAP9', 'BAGE2', 'PYROXD1', 'PIGC', 'MPLKIP', 'CECR1', 'C17ORF75', 'ISLR', 'NOMO3', 'S1PR2', 'COG5', 'CNIH2', 'SETD8', 'NR4A1', 'P2RY12', 'PAK2', 'CT47A11', 'PRPS1L1', 'PHLPP2', 'DMGDH', 'HBG2', 'LGI4', 'OR10T2', 'CD1B', 'TAC3', 'SNORA20', 'TRAP1', 'ZBTB41', 'GPD2', 'RRN3P3', 'PTPRK', 'COPA', 'FOXD4L3', 'RAB4A', 'ANKRD34A', 'ADGRG2', 'ZNF346', 'TYW3', 'APOA1', 'ZMYND19', 'TFAP2A', 'NCF4', 'HIST2H2AB', 'TMEM254', 'HAUS4', 'MLYCD', 'TNFRSF1A', 'SMG5', 'MKRN2', 'OVGP1', 'FDCSP', 'POLR2J4', 'MGME1', 'HDAC6', 'HTR4', 'FAM195A', 'SIKE1', 'KRTDAP', 'RAB37', 'UGGT1', 'AOC3', 'ECI2', 'TRIM44', 'CEP170B', 'ITIH6', 'ADRA2A', 'LOC389033', 'EDNRA', 'HNRNPL', 'EI24', 'EMC6', 'NCOA5', 'NAA40', 'PERM1', 'VWA5B2', 'RBP7', 'DENND6B', 'MYL9', 'DXO', 'NOG', 'ZCRB1', 'TLK2', 'LYSMD3', 'MCHR2', 'ENOSF1', 'TPGS1', 'HSD52', 'ANP32A', 'TNFAIP6', 'HIC1', 'KIFC1', 'MS4A5', 'MAOA', 'HHATL', 'OSBPL6', 'SEC11C', 'TBL1XR1', 'POM121L12', 'ARID3A', 'ECHS1', 'FAM90A1', 'ARHGAP32', 'C6ORF106', 'TMEM200B', 'TRIM66', 'PDCD2L', 'NFASC', 'INO80B', 'FAM71B', 'MAP2K1', 'DSPP', 'KLHDC7A', 'SNORA24', 'UBQLN4', 'OTUB1', 'DUS1L', 'LHFPL2', 'SLC7A5', 'STX3', 'RAB3IL1', 'ATG10', 'SEC61A1', 'SLCO4C1', 'ERO1LB', 'RARG', 'KLHL7', 'ZNF252P-AS1', 'MAGT1', 'JAG2', 'HTRA2', 'LYN', 'PCNA', 'COA5', 'RAD18', 'LOC286359', 'PSIP1', 'HCG11', 'NDUFB2-AS1', 'GYPE', 'MFI2', 'CKAP2L', 'SLC7A13', 'NDUFS3', 'WFDC2', 'MFSD7', 'SLC9C1', 'KLHL28', 'ZNF792', 'CXCL9', 'FDX1L', 'PDHA2', 'NR1I3', 'TM9SF3', 'BAD', 'FAS', 'KLHL34', 'TAB2', 'SH3GL3', 'SLC25A3P1', 'CFAP57', 'ZNF572', 'WBSCR22', 'CROT', 'CYP2C9', 'PPP2R1B', 'PJA2', 'LINC00705', 'NUTM2A', 'OXGR1', 'PCDHB10', 'NUMB', 'PLCG2', 'ABCB5', 'NEUROG2', 'TINF2', 'DPY19L2P1', 'SLC35G3', 'HTR3A', 'CLIP4', 'RGS16', 'GDPGP1', 'ZSCAN16', 'LOC400043', 'APRT', 'ADAD2', 'C20ORF85', 'PVT1', 'CSTF2', 'FGR', 'EBF1', 'BET1P1', 'ZNF826P', 'OR51V1', 'GIMAP1', 'UNC119B', 'METRNL', 'SMARCA2', 'USP28', 'RNF44', 'B4GALT1', 'GMFB', 'RDH16', 'SLC5A6', 'DPCD', 'MICU2', 'TRAF3IP3', 'MYBL2', 'TMCO3', 'TCF20', 'KCNK15', 'SYT8', 'RASA4CP', 'CRYZL1', 'ATP8B4', 'AIDA', 'STRN', 'HGS', 'ADGRB1', 'MUC7', 'TERC', 'NKX1-2', 'CKMT2', 'KIAA1804', 'PMS2', 'MADD', 'HSD17B3', 'SLC25A15', 'H2AFX', 'DGCR5', 'DHRSX', 'TMEM14E', 'XYLT1', 'CCNO', 'MEF2C', 'TMEM216', 'SAC3D1', 'CLPSL2', 'PTPDC1', 'NF1P2', 'FOXA3', 'MEF2A', 'CHCHD7', 'NPDC1', 'LINGO3', 'POLD2', 'LGI2', 'OMP', 'KCNB1', 'RBM10', 'BBX', 'OR2A9P', 'SLC25A3', 'SUMO2', 'AR', 'GMPS', 'FGA', 'COL18A1', 'OGFOD1', 'ACSL6', 'SNORA80A', 'ZSWIM4', 'SLC19A1', 'FBXL5', 'SIGLEC15', 'TBC1D8', 'AASDH', 'SSBP2', 'FOXQ1', 'NUBP2', 'SLC22A18', 'GLRX', 'ZNF500', 'CCDC127', 'SPATA45', 'IGSF22', 'CCDC120', 'ST3GAL4', 'DHRS12', 'LOC100287704', 'LLGL2', 'ZDBF2', 'RNF7', 'CLSTN2', 'ATL2', 'PDZD4', 'PBDC1', 'ZNF805', 'CNGB1', 'TMEM200C', 'CYP27B1', 'CINP', 'INO80C', 'SNTB2', 'PORCN', 'OR8B12', 'LOC641367', 'TISP43', 'SNORA15', 'DMP1', 'CASC2', 'DSCR4', 'MARVELD2', 'R3HDM4', 'LOC100130417', 'ZBTB5', 'GPRC5B', 'IFNGR2', 'B3GALT5-AS1', 'KRT31', 'C2ORF81', 'CLCC1', 'ADAM3A', 'CTSL', 'MOGAT3', 'ALPP', 'CNTN6', 'TMEM190', 'LINC00235', 'SNAR-A13', 'CREG1', 'QDPR', 'MRPL32', 'USP6NL', 'MARC2', 'UGT1A1', 'ZFY', 'ARHGAP15', 'PARP10', 'TSHZ1', 'TMEM41B', 'C1RL', 'C9ORF135', 'BST1', 'DEK', 'CDCA3', 'SNX1', 'N4BP2', 'KCNMB1', 'FGF7', 'ZNF707', 'FAM122A', 'FERMT2', 'ZNF286B', 'C12ORF77', 'USP24', 'ELAVL3', 'MCRS1', 'CCDC54', 'MRPL15', 'CCND3', 'SNURF', 'NDUFV3', 'RADIL', 'HYPM', 'NSFL1C', 'STK36', 'OR5L2', 'RAB40AL', 'FUCA1', 'SRP19', 'KIAA0040', 'FCRL1', 'SLC31A1', 'PLP2', 'SP5', 'DEFB128', 'USF1', 'POLR2K', 'RPL39', 'IP6K1', 'P3H1', 'BRAP', 'SLC9A7', 'KNSTRN', 'FAM110B', 'GFM2', 'NXF4', 'LOC143188', 'PCDHA5', 'FIBCD1', 'GLUD2', 'NFAT5', 'SNORD8', 'TMEM37', 'PAIP1', 'C10ORF11', 'GOT2', 'MORC1', 'ARL13A', 'TMEM63B', 'MRPL37', 'LIPI', 'SLC25A53', 'C2CD4D', 'NRM', 'KBTBD13', 'AKR7A2', 'RTN3', 'RPP38', 'AIM1L', 'CHRNB4', 'COLEC10', 'CHIC2', 'FBXO15', 'ACP5', 'CHADL', 'JAG1', 'SERPINA7', 'IWS1', 'HDDC3', 'POLR2H', 'RABGGTA', 'PIK3CB', 'LINC00483', 'AZGP1', 'NOL8', 'MCOLN3', 'CALCB', 'OR5A1', 'IL22RA1', 'BPI', 'TMEM120A', 'ZMYND10', 'RHOV', 'FMNL1', 'FLJ36777', 'OR2V2', 'HMSD', 'OR6C76', 'SIAH2', 'GGT6', 'CCSER1', 'FKBP1B', 'TSIX', 'STXBP5L', 'PWARSN', 'IRAK1BP1', 'YME1L1', 'PLA2G16', 'ASNSD1', 'COMT', 'RIPK4', 'GALP', 'NANOG', 'PPP2CB', 'TTC36', 'SYNPO2L', 'TCEAL3', 'SNORA61', 'HNMT', 'SERPINA10', 'RPL39L', 'SPTBN2', 'NINJ1', 'C12ORF60', 'ACAD8', 'KBTBD12', 'CENPK', 'CYP2S1', 'TRAPPC13', 'PLB1', 'GBP1P1', 'TRPV1', 'GPN3', 'PAPD4', 'EPB41L4B', 'CCT8', 'TCF7', 'PARD3B', 'TAS2R16', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.910032766523508e-15 NRMSE: 5.864991366917606e-16 MAPE: 1.8230245396130376e-12 Pearson Correlation: 0.11279687938197844 Spearman Correlation: 0.12945566286215981 Coefficient of Determination: -1.6320814815593332 RMSE: 1.2183306731479038 NRMSE: 0.30227030048824094 MAPE: 655.1763907444802 Predictor: ElasticNet Pearson Correlation: 0.8827539897418223 Spearman Correlation: 0.8796526303845426 Coefficient of Determination: 0.7376556120532847 RMSE: 0.37760864803121713 NRMSE: 0.07610469154346639 MAPE: 340.38357862652 Pearson Correlation: 0.27410873856231793 Spearman Correlation: 0.2539508340649693 Coefficient of Determination: -0.03756698108347489 RMSE: 0.7649333303035141 NRMSE: 0.18978150406974498 MAPE: 337.31626293486545 Predictor: RandomForests Pearson Correlation: 0.612484682480069 Spearman Correlation: 0.5998828583999523 Coefficient of Determination: 0.2751987205747053 RMSE: 0.6276470884165218 NRMSE: 0.12649839539200716 MAPE: 527.1600785357394 Pearson Correlation: 0.5402130132320393 Spearman Correlation: 0.4886011120866257 Coefficient of Determination: 0.2188347692363426 RMSE: 0.6637231503703506 NRMSE: 0.1646710540292638 MAPE: 276.85250026630194 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['IFT74', 'GBA', 'ZNF679', 'HNRNPH1', 'KCNMB1', 'KEL', 'OR56A1', 'CCDC43', 'C6ORF201', 'LBX1', 'CECR7', 'GABPA', 'SNHG6', 'EFCAB14', 'BHLHE41', 'BAG2', 'BUD13', 'SPAG8', 'ZNF335', 'TMEM207', 'F2', 'C5ORF15', 'MXRA5', 'MRPL57', 'PCBP3', 'GLMP', 'ADAM6', 'TMPRSS3', 'HEPHL1', 'DIP2B', 'OR10H5', 'DBNDD2', 'SNX25', 'GALNT12', 'C8ORF22', 'EMP1', 'FAN1', 'NAGS', 'NR1I2', 'GPR82', 'FASTKD3', 'VNN1', 'SEC61A2', 'COX8A', 'MAP1A', 'METTL9', 'SSH1', 'FAM72B', 'ATP5E', 'GKN2', 'OR4F21', 'NSUN2', 'IL18RAP', 'GJA8', 'HSPA1B', 'COX4I2', 'LRRC30', 'OR4A15', 'NKX3-1', 'PLXNB2', 'PTS', 'HYAL1', 'GPR153', 'CEP295', 'SNHG3', 'RC3H1', 'RCN2', 'TSHR', 'RRP8', 'CPT1B', 'QPRT', 'ZBTB11-AS1', 'DPPA4', 'ASL', 'PCBD2', 'GCNT3', 'BMP2', 'ANKRD29', 'FAM179B', 'PPP1R8', 'DYNLL2', 'HIST3H3', 'FAM228A', 'NUDT13', 'IGF2-AS', 'CFAP20', 'TRIM37', 'TIGD7', 'IAH1', 'WDR25', 'PTTG2', 'FAM157A', 'GFRAL', 'LOC283332', 'NOX1', 'HIST1H1B', 'NFIA', 'EVI2A', 'CNNM4', 'OTUD7A', 'KCNH8', 'TAPT1', 'C11ORF53', 'TBX21', 'KIF2A', 'GALR2', 'NRSN1', 'C1ORF159', 'TMC8', 'OVCA2', 'ZNF860', 'PDCL3P4', 'NOM1', 'ATP6V1G2', 'USP6NL', 'TPP1', 'TRAPPC6A', 'NDP', 'LINC00934', 'SLC7A5', 'PDP1', 'SERPINI1', 'WSCD1', 'ACADVL', 'RUNDC1', 'HMHB1', 'G0S2', 'LOC340357', 'ARL5A', 'FREM2', 'SHARPIN', 'OIP5-AS1', 'CEP95', 'LMNA', 'FRYL', 'METRNL', 'OR2W1', 'PADI4', 'ACYP2', 'FAM149B1', 'SEC24D', 'HKR1', 'SLC11A2', 'HABP2', 'CPEB4', 'ATP9B', 'TWIST1', 'IL7R', 'MTIF2', 'IFITM4P', 'KLHDC2', 'GNAS', 'CNNM1', 'HGS', 'GYS1', 'TFE3', 'ZNF568', 'BDH2', 'BMP8B', 'GPR31', 'SUMF2', 'TECPR2', 'GPX2', 'NSUN5P1', 'NXT2', 'NTRK2', 'LRRC20', 'PEBP4', 'COL1A2', 'RAB33B', 'DHX9', 'ANAPC7', 'GPRC5B', 'LINC00029', 'SNX4', 'TK1', 'LINC00152', 'ZNF7', 'RPL6', 'RPL13AP3', 'PDE6G', 'PCBP2', 'FLJ13224', 'ARHGAP19', 'FAM8A1', 'FOXN2', 'HSD3B7', 'KBTBD8', 'ZFP41', 'CCDC88C', 'SLC8A3', 'COX19', 'OLFM2', 'GNPDA1', 'ATP10D', 'C1QC', 'THBS3', 'LOC441454', 'TULP1', 'LINC00887', 'STAB1', 'B3GNT8', 'MFNG', 'FAM155A', 'ZBTB48', 'AK9', 'WDPCP', 'RBM12B-AS1', 'SNRNP25', 'CCDC106', 'PTGER1', 'ZNF813', 'INPP1', 'INAFM1', 'CCR9', 'DBT', 'GATA3', 'HIST1H1C', 'PPP6R2', 'CPN2', 'LOH12CR1', 'SLC39A1', 'TDRD10', 'C15ORF62', 'AP1S2', 'GAB4', 'ZNF346', 'SLC41A1', 'NCAPD3', 'RPS26P11', 'LOC644936', 'MAPRE3', 'LSM11', 'WRB', 'PSMD11', 'CYP4F12', 'FAM122C', 'ATP7B', 'PRSS35', 'ZSCAN21', 'MILR1', 'ELOVL2', 'TNFSF13', 'LKAAEAR1', 'KRTAP5-7', 'SUPT20HL2', 'INTS10', 'KLF4', 'PER1', 'DNAJC14', 'FAM86C2P', 'SGMS2', 'PCCB', 'IVD', 'IK', 'EPS8', 'A2M', 'CHRNA4', 'ARHGAP10', 'TCP1', 'PPARGC1B', 'DEFB109P1B', 'SMCO2', 'PPIP5K1', 'ALCAM', 'DNAJC18', 'FBXO34', 'LIN7B', 'GLTSCR1', 'KLC2', 'JAG2', 'RPP25L', 'NUP160', 'C19ORF18', 'NACC1', 'ZNF844', 'TMEM218', 'DEFB104A', 'ZFP37', 'SRSF2', 'CALCOCO2', 'PARL', 'IL6ST', 'CBX5', 'CSNK1G1', 'SYT8', 'ACAA2', 'AP1M2', 'PIR', 'SPEF1', 'TSPAN8', 'GPX6', 'MAGEE1', 'PSMB2', 'CRHR1', 'SSX5', 'AGAP6', 'PXT1', 'CEBPA', 'ARMC6', 'CASQ1', 'RIPK1', 'TMC6', 'FAAH', 'ACBD5', 'OPRL1', 'STAG2', 'KRTAP10-6', 'TMEM136', 'PPIL3', 'GATAD2B', 'SLC9A6', 'DEPDC1', 'LINC00999', 'BPGM', 'GANC', 'MADCAM1', 'TMEM132C', 'SMG1P2', 'GOLGA6L9', 'C9ORF47', 'LMO2', 'CLDN18', 'TIPIN', 'TRMT10A', 'WDR62', 'YJEFN3', 'TRIP6', 'CD63', 'TRIM34', 'DLG1', 'SLC25A30', 'FAM110C', 'UBR4', 'ZDHHC7', 'TEX33', 'TMEM74', 'NR5A1', 'ATP4B', 'IGDCC3', 'OR6B2', 'TCEA2', 'KLHDC7B', 'LINC00094', 'C9ORF78', 'PPIE', 'SCGB1B2P', 'PTCHD4', 'CNIH3', 'OR6Y1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.950071039693373 Spearman Correlation: 0.8584663024646316 Coefficient of Determination: 0.9026349803481211 RMSE: 0.1509216937709823 NRMSE: 0.03642196437265784 MAPE: 39.09765230485798 Pearson Correlation: 0.3421146965852135 Spearman Correlation: 0.371319871232075 Coefficient of Determination: -1.0593955120481846 RMSE: 0.7706843336068885 NRMSE: 0.27450911259372696 MAPE: 103.22207177785572 Predictor: ElasticNet Pearson Correlation: 0.8762985034287253 Spearman Correlation: 0.7283711629325276 Coefficient of Determination: 0.7589748753869286 RMSE: 0.23745501744194752 NRMSE: 0.05730506973042149 MAPE: 62.75945941079476 Pearson Correlation: 0.8218880736169902 Spearman Correlation: 0.6514047410008781 Coefficient of Determination: 0.6623978894407236 RMSE: 0.3120392506577608 NRMSE: 0.11114488002057374 MAPE: 47.80110506008074 Predictor: RandomForests Pearson Correlation: 0.8578165199041136 Spearman Correlation: 0.72077236946326 Coefficient of Determination: 0.7293245686023597 RMSE: 0.25163706521488227 NRMSE: 0.06072762632789108 MAPE: 54.50820195976439 Pearson Correlation: 0.8445093857472966 Spearman Correlation: 0.7083635909866122 Coefficient of Determination: 0.7087528298613976 RMSE: 0.2898261094048223 NRMSE: 0.10323280833653509 MAPE: 43.73318059293046 Protein: CCND1 x_train_column_count: 859 x_train columns: ['SIRT6', 'HEATR3', 'FOXO3B', 'CBR1', 'LRIG2', 'SHQ1', 'DERL3', 'PVR', 'SPZ1', 'NUDT2', 'FAF2', 'KIN', 'FGF1', 'DYM', 'PIP5KL1', 'CDCA8', 'TRABD', 'LOC100190986', 'SPATA20', 'SNORA32', 'SNORA66', 'RMRP', 'POLD1', 'PIH1D1', 'ASAP2', 'ZNF549', 'MFSD2B', 'TIGD7', 'DMXL2', 'SH3PXD2A', 'OR7A10', 'PRAMEF11', 'RPS29', 'CLUL1', 'APP', 'WFIKKN2', 'PMM1', 'PODXL2', 'CRNKL1', 'KCMF1', 'TAF1C', 'HDDC2', 'TRIM77', 'BIRC8', 'HIST1H3G', 'PDE1C', 'CCR3', 'GRIP2', 'PCNAP1', 'ZSCAN30', 'FCRLA', 'SEZ6L2', 'XPO5', 'TANK', 'L3MBTL2', 'SPP2', 'GOLPH3L', 'CCNL1', 'QRICH2', 'PCNXL3', 'SEC23IP', 'TOPORS', 'RPL38', 'INPP5A', 'FBXO5', 'HAUS6', 'ZNF446', 'FADS6', 'GTDC1', 'SERPINB11', 'PTPRU', 'SPINK2', 'AEBP1', 'CDHR3', 'ELMOD1', 'TRAPPC2L', 'ENTPD2', 'RNASEH2B', 'ETFDH', 'RPS10', 'RECQL5', 'ZNF292', 'P2RY2', 'COLCA1', 'ATP5H', 'DGCR5', 'SNAP25', 'MSLNL', 'PTP4A1', 'IMPA2', 'TBC1D24', 'PABPC1P2', 'LY9', 'GAL', 'USP13', 'MRPL36', 'HRSP12', 'ZCCHC5', 'TMEM150B', 'RP9', 'MGST2', 'DLD', 'ZNF296', 'RXRB', 'CD59', 'SLC38A9', 'CLDN7', 'TRIM38', 'GSTT1', 'GNG7', 'IL3', 'EIF3J', 'TMED3', 'SRP68', 'C8ORF22', 'DCP2', 'GTSE1-AS1', 'GABRG1', 'RALGAPB', 'PALMD', 'OR5V1', 'MRS2', 'PRKRIP1', 'AQP1', 'GOLM1', 'TOLLIP', 'PPP1CC', 'IKZF1', 'KHDRBS2', 'BNIPL', 'APOL5', 'PLXNA4', 'IFT27', 'RNF167', 'BRICD5', 'PEF1', 'NXPE4', 'SFT2D2', 'CCBL1', 'ITGA3', 'RSPO1', 'KIAA1715', 'KDELR2', 'NDRG3', 'LINC00319', 'DUSP15', 'RHAG', 'SLC41A2', 'SLCO1B7', 'HELT', 'SS18', 'PAPOLG', 'ADRA2A', 'PRB2', 'EHMT1', 'VPS13A', 'CLDN16', 'RSC1A1', 'MT1M', 'LMX1A', 'EIF1AD', 'ZNF667', 'MARK2', 'GALR3', 'SULT1A3', 'CDC7', 'LRRC30', 'CREBL2', 'C7ORF49', 'MAD2L2', 'TSNAX-DISC1', 'NT5C1B', 'MAPK1IP1L', 'GDF6', 'EPHA10', 'LOC284379', 'GGCT', 'ZKSCAN7', 'ANP32A', 'C1ORF21', 'EXOSC2', 'TMEM45B', 'PSPC1', 'SAMD12', 'SLAIN1', 'VENTXP1', 'CCDC18', 'LIPC', 'CLDN4', 'CT62', 'AFF4', 'CACTIN', 'WDR54', 'NEURL1', 'IGSF3', 'CSTB', 'OXA1L', 'RNF217', 'STRN', 'MMP3', 'ZSWIM8', 'CGREF1', 'PCOLCE', 'BIRC6', 'RPE', 'VSTM4', 'CLLU1', 'GEMIN2', 'POT1', 'NUDT5', 'DHRS11', 'CDK11B', 'LIN28A', 'CCDC64B', 'ERP29', 'KRTCAP2', 'LONRF3', 'GLT1D1', 'SH3GLB2', 'NGF', 'SPTLC2', 'CARD16', 'SNORA11B', 'ZFHX4-AS1', 'SORBS2', 'TMEM203', 'GCFC2', 'MTIF3', 'HIGD1B', 'ZNF639', 'ZNHIT6', 'NCOA5', 'SPDYE5', 'NR2E3', 'CTAG1B', 'SLC9A7', 'ZDHHC22', 'RIMKLB', 'OR10X1', 'TIMMDC1', 'ASTL', 'RSPH6A', 'RARS2', 'EVA1C', 'TPM3P9', 'RAB31', 'NCOA6', 'MAEA', 'KIAA1024', 'POLD4', 'FBXO25', 'C10ORF11', 'SEC22A', 'MUSK', 'PPM1D', 'C3ORF14', 'ABHD17A', 'DUSP3', 'GPLD1', 'HYOU1', 'ZSCAN16', 'EMX2', 'OR7G2', 'C10ORF62', 'AUP1', 'NFATC2', 'STON2', 'REST', 'ESF1', 'AXIN2', 'EPOR', 'CHMP5', 'WISP2', 'TFPI2', 'PRB4', 'RBFA', 'TBR1', 'TIA1', 'ZNF816', 'CELF6', 'SHANK1', 'HSP90AA1', 'ABCC5', 'SBF1P1', 'LUZP4', 'ARID5B', 'ISG20L2', 'EIF4B', 'CRYL1', 'PRAMEF4', 'TBC1D10B', 'HECTD1', 'MED29', 'OR4K14', 'SLC3A2', 'ZNF480', 'SPANXN4', 'XRRA1', 'TROAP', 'MEX3A', 'IL1RN', 'ANKLE1', 'C3ORF33', 'DAP', 'CD84', 'SV2C', 'HOMEZ', 'DOC2B', 'EDEM1', 'ID2', 'GGTLC1', 'GPR176', 'TPD52L3', 'DDO', 'LOC441204', 'CHERP', 'MRPL3', 'CLEC17A', 'LY6H', 'ID1', 'INTS4', 'FAM90A7P', 'FASTKD2', 'LSMEM2', 'LOC284632', 'SLC17A1', 'SYNPO', 'AUTS2', 'TMEM19', 'ZMIZ1-AS1', 'FBXO10', 'EPB42', 'C10ORF55', 'CD44', 'MBNL3', 'ACER1', 'PRR23C', 'TM4SF19', 'HMX1', 'RPS10P7', 'PEX14', 'RINT1', 'CDX4', 'ZDHHC4', 'NCOA1', 'LMCD1', 'OR7C1', 'H1F0', 'ACSL5', 'APOE', 'TMEFF2', 'LOC100272216', 'TEX26', 'ZFHX3', 'HSPD1', 'EFCAB5', 'ATXN7L1', 'AKAP1', 'RAD1', 'DYRK1B', 'SIGLEC11', 'GPAM', 'CCL27', 'ZCCHC9', 'HOXA3', 'CCDC159', 'ALMS1', 'DNAJB9', 'TBL1Y', 'TBC1D2', 'DGKZ', 'SREK1IP1', 'NFYC', 'COPS7A', 'LYPLAL1', 'SCN5A', 'TMLHE', 'FAM127A', 'RBBP7', 'CDH11', 'POLH', 'CDC42SE2', 'PTPN3', 'MARVELD2', 'LRMP', 'ABTB1', 'RPS15A', 'OGFR', 'POLK', 'RIOK2', 'BLOC1S3', 'GKN1', 'NECAB2', 'CCDC169', 'ZNF532', 'TUBB4A', 'VTI1B', 'PNKD', 'TRIM37', 'RPL9', 'NKAIN4', 'PRMT5', 'SCN4A', 'OR11H6', 'ADAT1', 'BDP1', 'PRKG2', 'ACVR2B-AS1', 'SIGLEC1', 'ZNF430', 'OR8G2', 'PLOD3', 'HIPK2', 'CHMP2B', 'MATN1', 'COA1', 'CGN', 'CSNK1A1P1', 'H2AFY', 'TDRD9', 'ENOX1', 'PLCB2', 'PPIL6', 'IGF2BP2', 'ZNF699', 'HMGN3', 'UBXN2A', 'PCBP3', 'CRYGS', 'MPND', 'IFNA16', 'C9ORF72', 'ANP32AP1', 'LFNG', 'SERPINA11', 'NEU3', 'RBAK', 'TECTB', 'PPP1R12A', 'PATE2', 'PPP1R7', 'SEMA6C', 'SLC27A1', 'C19ORF60', 'CCL20', 'PM20D1', 'TRIM64', 'ZNF703', 'CYP4F3', 'LRRIQ1', 'SCARNA23', 'RTN4RL2', 'ATP8A1', 'ZDHHC17', 'ZNF595', 'TSEN15', 'EPPK1', 'CRIPAK', 'ZNF709', 'IST1', 'MET', 'LBR', 'UBE2L6', 'BCL2L11', 'SMIM10L2B', 'GPIHBP1', 'ZDHHC13', 'SLC12A9', 'GPR39', 'PGBD5', 'CLIP2', 'ZNF266', 'TBC1D3B', 'DUT', 'NINL', 'GDI2', 'PMS2', 'ST6GALNAC3', 'CCDC181', 'CEP76', 'USP30', 'LUZP2', 'B3GALT5', 'MICALCL', 'NNAT', 'GPR55', 'FAM222B', 'SKP2', 'ZNF350', 'PCSK1N', 'RPL10L', 'ASB7', 'CRB1', 'ACOXL', 'MPHOSPH9', 'TNFSF10', 'SIPA1L1', 'LCE1D', 'TRPC2', 'UCN3', 'ZNF354B', 'TTLL8', 'FAM72A', 'STH', 'SPEN', 'GABRB3', 'NLGN4Y', 'TBX5', 'OR6K6', 'AFAP1', 'BCL2A1', 'ZNF664', 'MMRN1', 'OR4D5', 'PIGR', 'ZAR1L', 'PCBP1', 'GAGE4', 'B4GALT3', 'SNORA11', 'MGAM2', 'C8ORF31', 'DNAJC18', 'PLEKHA8', 'LOC100130331', 'MAN1C1', 'UTP3', 'TRIM51', 'CD93', 'GPD1', 'LOC643923', 'ZNF461', 'KDSR', 'PPOX', 'RALGPS1', 'N4BP1', 'ZNF341', 'STYX', 'TNC', 'SLC1A5', 'BCL2L1', 'PIP', 'RCCD1', 'AADACL4', 'TAS2R39', 'C19ORF66', 'COQ10A', 'PTAFR', 'DUSP4', 'PRR7', 'PEBP1', 'OR11L1', 'OR9I1', 'ERG', 'FOXB2', 'CNP', 'ITGB7', 'NKAPL', 'SOHLH2', 'LARS', 'STAC', 'RPL3L', 'ATP6V1G3', 'TCAIM', 'ZNF442', 'NOP16', 'OR11H12', 'DNHD1', 'NOTCH4', 'SSX5', 'ZNF543', 'ZNF440', 'AAAS', 'KRTAP5-6', 'HMP19', 'SNORA58', 'MGAT5', 'CREG2', 'LCMT2', 'PRPF8', 'SYCE1L', 'GPR89B', 'UNQ6494', 'WDFY3-AS2', 'COL24A1', 'CIAO1', 'DEFB108B', 'AKAP10', 'ARHGAP28', 'SLC17A8', 'CPE', 'KIAA1551', 'ZNF705D', 'ABCA17P', 'RHBG', 'MVP', 'CRX', 'ABHD1', 'KRTAP2-2', 'TMEM236', 'LAMP2', 'SPATA4', 'SYCP3', 'SEPT14', 'PPIF', 'GTF3C4', 'TSC22D2', 'MOB3B', 'WDR18', 'BAZ2A', 'C9ORF106', 'ZNF160', 'UBN2', 'KLHL3', 'GLRA1', 'OR9K2', 'SCN1A', 'ZNF670', 'PSMB5', 'MMP23B', 'SPECC1', 'ZNF679', 'TRIM74', 'ASAH2B', 'ASCC2', 'C20ORF202', 'ANKRD20A20P', 'FLT3', 'MLANA', 'TRIM71', 'TBRG4', 'MKI67', 'SUMF1', 'BACE1', 'SHD', 'C22ORF29', 'ZMYM6', 'LTC4S', 'SPATA5L1', 'PEX12', 'TRIO', 'PTTG2', 'C9ORF129', 'RDH11', 'FAM26F', 'DAW1', 'WNT3A', 'OPALIN', 'GCC2', 'ADAMTSL2', 'ALCAM', 'CGA', 'EIF4A2', 'C3ORF52', 'SCTR', 'ZNF540', 'MRPL35', 'SPATA24', 'HINT2', 'C4BPB', 'GBP4', 'SKP1', 'LOC100128239', 'MYO3B', 'SMCO2', 'FH', 'MMP10', 'CSHL1', 'SNN', 'B3GAT2', 'FXYD4', 'SMPDL3A', 'C1ORF198', 'ACVR1', 'MNS1', 'SDHAF2', 'FAM65C', 'STOX1', 'DCTN4', 'C1ORF68', 'OR11H4', 'SLC35F2', 'OR52A1', 'GOLGA6C', 'NUP210', 'APTX', 'GPC3', 'ASTN2', 'TRIM35', 'MIR17HG', 'TAC4', 'DBN1', 'PLEKHJ1', 'VWCE', 'APC', 'USE1', 'TSPO2', 'MUSTN1', 'EFEMP2', 'ERF', 'UBE2D3', 'TPT1', 'CCM2', 'RNF182', 'C14ORF39', 'SNORA45B', 'AIDA', 'EDC4', 'TTC28-AS1', 'CAPN14', 'PRRX2', 'PTPN9', 'TBPL1', 'MROH6', 'EIF4EBP1', 'XPO4', 'RPL8', 'LCE2B', 'AMIGO2', 'EID3', 'PIP5K1C', 'RPL32P3', 'NFAT5', 'SSUH2', 'ERBB2', 'RRBP1', 'ZNF335', 'SNX11', 'H2BFXP', 'RAB24', 'NR1H2', 'SHC4', 'LOC606724', 'FZD9', 'CWC27', 'CSMD2', 'STPG1', 'GLIS3', 'ETV4', 'LINC00626', 'SVEP1', 'DPH2', 'CDX1', 'PDZD7', 'FBXO47', 'CATSPER2', 'ASPHD2', 'TUBAL3', 'ZNF772', 'MSX2P1', 'VCAM1', 'RAB4A', 'NGLY1', 'LINC01098', 'OR51F2', 'ADCY10', 'AKR7A3', 'MVB12A', 'AKIP1', 'APEX2', 'KCNJ2', 'SGPP2', 'GORASP2', 'INPP5E', 'TMEM254', 'LCE3A', 'COL10A1', 'ELP6', 'TMEM189-UBE2V1', 'OTC', 'ESPNL', 'STAG3L3', 'TXNRD2', 'SECTM1', 'PLXDC1', 'ITGAM', 'VPREB1', 'CHP1', 'LINC01555', 'VWA2', 'OR10A3', 'C1QTNF1', 'FGF21', 'CD300E', 'REG1B', 'NR6A1', 'C2ORF16', 'FAM46A', 'KIF1C', 'POM121C', 'NSUN5', 'UGT1A1', 'SNORD116-19', 'FAM50B', 'LOC154449', 'AMOTL1', 'PUS7', 'STX5', 'CORO2A', 'TBRG1', 'TBXA2R', 'MAF', 'BPIFC', 'OXER1', 'TOX4', 'CEP70', 'CNKSR3', 'FAM183B', 'RUNDC1', 'KIAA1468', 'OLFML3', 'CEP83-AS1', 'SGCD', 'LAMB2P1', 'RBM48', 'CTNNAL1', 'TRIM55', 'PTTG1', 'MMP23A', 'ART3', 'USP53', 'LIN52', 'MT1B', 'FGF9', 'EXO1', 'SETBP1', 'ADAMTS14', 'IFT52', 'POLR3G', 'SERPINE1', 'OR1A2', 'OSER1', 'ADAM29', 'C16ORF96', 'ELFN2', 'PRR21', 'DZANK1', 'EXOC3', 'CBLL1', 'C11ORF73', 'PMS2P2', 'GABARAPL2', 'GOSR1', 'LRFN4', 'SPATA3', 'PLSCR3', 'KRTAP12-3', 'OR6X1', 'AFP', 'ARRB1', 'ZMYND11', 'LINC01312', 'PACRG-AS1', 'FAM206A', 'PPIAL4D', 'NOL3', 'STK35', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.0678691922960446e-15 NRMSE: 6.419720769835908e-16 MAPE: 2.0954036195417803e-12 Pearson Correlation: 0.26547007933889943 Spearman Correlation: 0.17370012681689592 Coefficient of Determination: -2.355361233141893 RMSE: 0.4303681632324813 NRMSE: 0.30651256568890756 MAPE: 1911.802954718609 Predictor: ElasticNet Pearson Correlation: 0.7084304915318632 Spearman Correlation: 0.692159039259872 Coefficient of Determination: 0.43002409837414024 RMSE: 0.18035720699448524 NRMSE: 0.1084255371430458 MAPE: 259.8196183858165 Pearson Correlation: 0.4897930752253229 Spearman Correlation: 0.47478294800507276 Coefficient of Determination: 0.22506043794518382 RMSE: 0.20682565665713035 NRMSE: 0.14730332791374448 MAPE: 1208.793570619596 Predictor: RandomForests Pearson Correlation: 0.5653322464990787 Spearman Correlation: 0.5573197313775302 Coefficient of Determination: 0.2569606704557632 RMSE: 0.20592598642725282 NRMSE: 0.1237967479213024 MAPE: 330.1094644939754 Pearson Correlation: 0.5125338252744054 Spearman Correlation: 0.5271534484440543 Coefficient of Determination: 0.2315041328591485 RMSE: 0.20596397433925337 NRMSE: 0.1466896290376997 MAPE: 991.680574538786 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['TCEB3C', 'TP53AIP1', 'CLEC3B', 'TMEM2', 'PABPC1P2', 'WDR12', 'SRR', 'KHNYN', 'TMEM209', 'SCEL', 'SERPINA9', 'DHX9', 'ATP2B4', 'OPN5', 'CCL13', 'VAMP7', 'UBAP2', 'TAF6L', 'ADAM21', 'TYMS', 'HDAC5', 'SLC6A19', 'GRSF1', 'TAF2', 'AWAT1', 'CCNB3', 'CWF19L2', 'RNU4ATAC', 'BRAT1', 'ZNF485', 'EDA', 'SCP2', 'LINC01341', 'SBK1', 'UNC5C', 'OR6N1', 'POLD2', 'ID1', 'LRRC66', 'RENBP', 'PIGY', 'IPO8', 'USF1', 'GRIN1', 'C12ORF49', 'NUSAP1', 'PABPC1L2A', 'FAM135A', 'VAMP5', 'COMMD8', 'USP4', 'HTATIP2', 'MRPL52', 'ZRANB1', 'EIF3E', 'PTPN4', 'SLCO3A1', 'RPL19P12', 'UNC79', 'ANKRD36BP1', 'ANGPT2', 'MED25', 'GPR160', 'CACNA1C', 'HSF5', 'DACH2', 'CDKN1C', 'TXNDC11', 'PHF10', 'MYDGF', 'TMEM186', 'URM1', 'SNAP91', 'SLC43A2', 'NUGGC', 'ATP6V0B', 'PRDM5', 'CENPC', 'MORN4', 'INTS8', 'COL15A1', 'SPAM1', 'MFSD3', 'PTAR1', 'ZNF800', 'CD4', 'HIPK4', 'MCF2L', 'DIMT1', 'ZNF207', 'PTGFRN', 'FAM163B', 'SERINC2', 'CASC2', 'KRT33B', 'THEM4', 'C3ORF38', 'MYH14', 'P2RX7', 'COL4A5', 'LRRC4', 'LILRA6', 'ZNF75D', 'SOD2', 'FAM99A', 'KATNA1', 'CLEC10A', 'RCE1', 'ADAL', 'UBE2D4', 'LDOC1', 'ZDHHC9', 'GTPBP10', 'RNF8', 'AAAS', 'POLR3G', 'SELK', 'C9ORF3', 'KLHL8', 'TAF1D', 'RRP15', 'LAS1L', 'ABCF3', 'SF1', 'NPB', 'OR9Q1', 'PRPS1L1', 'FOXL1', 'DDI2', 'FBXO6', 'NMBR', 'AASDHPPT', 'FRY', 'IFI30', 'CNPY3', 'PRR4', 'TSEN2', 'HOXB1', 'CKAP2L', 'NLGN2', 'CCDC77', 'MCF2', 'YIPF3', 'PRR23B', 'CPEB3', 'ANXA2', 'GPR27', 'PMS2P4', 'PRKAR2B', 'POTEE', 'PAGR1', 'CYB5RL', 'ABHD11-AS1', 'ZBTB2', 'CCL1', 'PCLO', 'RPL22L1', 'SPHK2', 'PRPF38B', 'ZNF846', 'OR6C4', 'NXPE4', 'LINC01138', 'LY86', 'MKX', 'CTSD', 'CRYBB2', 'DKFZP434L192', 'RELL1', 'CENPBD1', 'PLLP', 'DCAF8L2', 'PHF13', 'INSIG1', 'MIEN1', 'PPFIA2', 'SLC39A9', 'CDK5', 'METTL25', 'CBX1', 'HIST1H3C', 'FAM72B', 'RALGPS1', 'CABLES1', 'FANCF', 'TTC8', 'ADRBK1', 'TKTL1', 'TCN1', 'GNG5', 'ZNF91', 'DDIAS', 'LINC00442', 'NEURL1', 'UQCC3', 'NLRX1', 'XPO1', 'LINC00238', 'ADAM20', 'RASSF6', 'TRIO', 'SLIRP', 'BRI3BP', 'CDCA3', 'PP2D1', 'TRAPPC11', 'IFNA16', 'RHOXF1', 'NAP1L2', 'C20ORF202', 'LMNTD1', 'TIMM10B', 'ELFN2', 'LOC145845', 'UBE2W', 'WWC3', 'FASN', 'CCDC62', 'UBA7', 'NBEAL1', 'PROM1', 'POLD3', 'BAIAP3', 'TEAD4', 'SERPING1', 'DCLK2', 'LOC146880', 'VBP1', 'TNFSF14', 'ATL2', 'TACC3', 'OR51T1', 'NR2F1', 'FAM179B', 'LINC01001', 'DDX11L2', 'ZNF878', 'STAT4', 'PIN1P1', 'C10ORF91', 'RPL22', 'DDB1', 'KLHL17', 'ACSM4', 'SKOR1', 'LMO3', 'MYO1D', 'B4GALT3', 'PLS3', 'FAM181A', 'MTMR11', 'CYP3A4', 'KANSL1', 'KAZALD1', 'PLP2', 'TXLNB', 'METTL21C', 'HYPK', 'CA5B', 'CBWD1', 'GAS2', 'TUBA4B', 'WIPF1', 'RAD52', 'FBP1', 'NOP9', 'SOWAHD', 'LAG3', 'SPAG11B', 'OR1J1', 'RAB21', 'INE1', 'CT62', 'HOOK2', 'CCDC7', 'ZNF771', 'IDUA', 'DDX59', 'NHLRC4', 'TCEAL4', 'CCNE1', 'MMP10', 'NUP205', 'THOP1', 'KIAA1211L', 'OR51E1', 'RPE', 'RAB11A', 'TMEM69', 'TMEM126B', 'PIAS1', 'LINC00426', 'CELF3', 'SH3BGRL2', 'NOD1', 'CTU1', 'ATP8A1', 'FUT7', 'RPL26L1', 'NCK1', 'GNGT2', 'SLC38A10', 'EIF3B', 'YBX2', 'COX7C', 'TRIP10', 'BEND5', 'UGT1A3', 'LACC1', 'FABP3', 'ERICH5', 'NPM2', 'VPS8', 'PSMA1', 'DEFB119', 'SLC25A41', 'NBPF7', 'STRN', 'PGA3', 'PPP2R5A', 'GOLGA2P3Y', 'DUOX2', 'PRSS33', 'ABHD4', 'PLCH1', 'RAB9B', 'CKS2', 'CDKL4', 'GBX1', 'PDCD5', 'FAM86JP', 'NPVF', 'RIN3', 'LGALS9B', 'NCAPG2', 'RASIP1', 'RRBP1', 'KRTAP15-1', 'DMBT1P1', 'SMS', 'LOC341056', 'GCG', 'TGFBRAP1', 'CDK3', 'PLAC1', 'TAF5L', 'SNORD116-4', 'HSD17B2', 'OR4M1', 'SPATA22', 'TMEM168', 'BOP1', 'ATP13A4', 'GABARAPL2', 'PASD1', 'FETUB', 'CRHBP', 'ALX3', 'KLRAP1', 'IL12B', 'PRLR', 'TPM2', 'RHOD', 'HNRNPU-AS1', 'MAST3', 'TAF9B', 'SYF2', 'TAS2R3', 'DRG1', 'WDR7', 'YPEL2', 'SNRPGP15', 'MATN2', 'TIGAR', 'MAPK9', 'FBXO39', 'GJD4', 'RBBP5', 'FUK', 'AOX2P', 'C11ORF24', 'ALDH1L1', 'AIPL1', 'SOX7', 'PRO0628', 'ISG20', 'DUSP27', 'SLC38A1', 'ZNF354A', 'PHLDA3', 'EGFL7', 'TUBA3FP', 'SH3D21', 'ANKAR', 'CEP76', 'MRPL48', 'TTC27', 'RPL32P3', 'BCDIN3D-AS1', 'GINS4', 'SAMD11', 'RALGAPA2', 'GNAI2', 'PIK3AP1', 'KDR', 'SPTLC1', 'LRRC43', 'ZNF655', 'SLC25A38', 'POLR2F', 'ATPIF1', 'WBSCR22', 'UNK', 'GPR89B', 'CCNI2', 'KLHDC8B', 'CTAGE4', 'ELAVL1', 'LDHD', 'C8ORF4', 'GGT5', 'LCE1C', 'WSCD1', 'CHMP2A', 'LINC00632', 'LDLRAD2', 'UCN2', 'SHMT1', 'LRRC55', 'CYP8B1', 'EHD4', 'MAP4K1', 'TMCO6', 'NUBP1', 'SESN3', 'OPRL1', 'NAA10', 'ACRV1', 'AADAC', 'LRP11', 'H6PD', 'WDFY1', 'ZNF71', 'NUP43', 'PCTP', 'HNRNPK', 'ADGRA2', 'FAM156A', 'HEY2', 'HIST1H1C', 'DNAJB8', 'EML4', 'MROH2B', 'LOC645166', 'DCANP1', 'CLEC1B', 'AQP9', 'KCTD17', 'ARHGDIG', 'B4GALNT1', 'SLC37A4', 'GNAZ', 'PROKR1', 'PCDH9', 'SS18L1', 'OXNAD1', 'AGAP2-AS1', 'RSPH4A', 'SHCBP1', 'ALLC', 'KRT20', 'STX11', 'GSTZ1', 'MED19', 'VAT1L', 'LINC00620', 'HIRA', 'SUCLG1', 'OR10X1', 'PAN3', 'GNG4', 'DBP', 'BRF1', 'PADI4', 'DLX5', 'ACTL7A', 'SNORA65', 'TTYH2', 'LOH12CR2', 'HLA-DQB2', 'FAM21A', 'SLC16A1', 'APOBEC4', 'RNF115', 'PHGDH', 'LOC391322', 'ZNF614', 'PIGW', 'AMN', 'P2RX1', 'LARP1', 'C7ORF62', 'HRAS', 'CDK15', 'TAS2R46', 'MSMB', 'LOC606724', 'MIR4697HG', 'ZNF772', 'OR56A4', 'CLEC4M', 'SPINK2', 'PPP1R16B', 'MTNR1A', 'VIL1', 'CAND2', 'SH2B1', 'SELE', 'C20ORF27', 'ZNF117', 'OR5C1', 'DHFR', 'CACFD1', 'CNKSR2', 'NXF5', 'PSMD5-AS1', 'NRN1L', 'TMPRSS4', 'C3ORF35', 'HMX2', 'WDR3', 'SLC39A1', 'SEZ6', 'XIAP', 'ZYX', 'SST', 'CLEC17A', 'C8ORF82', 'DOLK', 'SNED1', 'GOLGA8F', 'C1RL', 'NODAL', 'PRB1', 'FGF13', 'SPNS1', 'TATDN2', 'MAP2K3', 'OMG', 'FOXJ2', 'ZFPL1', 'LMNTD2', 'TNFRSF1B', 'STRADA', 'UCKL1-AS1', 'NAPEPLD', 'ZNF703', 'B9D1', 'LCA5L', 'ZNF570', 'PNLIP', 'MIA2', 'SERAC1', 'OTUD6B', 'SRP72', 'WBSCR16', 'CRBN', 'ANKEF1', 'PIANP', 'TIMM17B', 'QPRT', 'HOPX', 'CDHR4', 'TUBGCP2', 'DDX49', 'ZNF304', 'PAFAH1B1', 'PKIB', 'ANKRD31', 'C12ORF29', 'C6ORF48', 'RNASE12', 'EFCAB12', 'BAG4', 'PPP5C', 'ST6GAL1', 'CHID1', 'ZNF484', 'RPH3A', 'NDUFS7', 'NAA25', 'LOC728323', 'SMARCAL1', 'YWHAH', 'TP53INP2', 'HMSD', 'ERLIN2', 'PIGA', 'TP53INP1', 'C14ORF166', 'CENPF', 'TMEM132B', 'MAD1L1', 'GREB1L', 'CASC3', 'MUM1L1', 'LOC653786', 'CHI3L1', 'SNCB', 'DNAJC15', 'HES7', 'EPB41L3', 'PDK4', 'COA3', 'CRYBA1', 'MAFB', 'POLB', 'MFF', 'NOB1', 'MAP1A', 'TTC28-AS1', 'VCX3B', 'KPNA5', 'DERA', 'FHL5', 'OR4D5', 'TSEN34', 'IGSF9', 'KLF11', 'PDE7A', 'POLR2J2', 'SERINC4', 'FAM127A', 'CD9', 'YES1', 'RPL3L', 'ZC3H12B', 'MEX3B', 'MYBPHL', 'PAXBP1', 'ECI1', 'LOC285696', 'ISL1', 'C1ORF52', 'LMX1B', 'SPINT3', 'LCN6', 'KCNE2', 'CRIP3', 'TNFRSF11B', 'KCNK1', 'PLAGL2', 'CAMK1D', 'COQ10B', 'AIRE', 'PRIMA1', 'DTNBP1', 'GSC2', 'MVB12B', 'VPS13B', 'TM4SF4', 'CHODL', 'MTERF1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 3.2135105413977155e-15 NRMSE: 5.474744094924298e-16 MAPE: 3.886451224647244e-12 Pearson Correlation: 0.40934821480181943 Spearman Correlation: 0.24269339576626675 Coefficient of Determination: -2.0951835553004923 RMSE: 1.5957684587957135 NRMSE: 0.2958962467635293 MAPE: 1511.6520086355945 Predictor: ElasticNet Pearson Correlation: 0.9375702406257302 Spearman Correlation: 0.8729687993712262 Coefficient of Determination: 0.8723932007481283 RMSE: 0.3640571055409575 NRMSE: 0.06202311967237806 MAPE: 281.47241514307996 Pearson Correlation: 0.7394224578137145 Spearman Correlation: 0.5704516632523657 Coefficient of Determination: 0.5436270551439526 RMSE: 0.6127546522115439 NRMSE: 0.11362036940692452 MAPE: 429.02397817428295 Predictor: RandomForests Pearson Correlation: 0.8590690756077887 Spearman Correlation: 0.7255051535659016 Coefficient of Determination: 0.7320254343808695 RMSE: 0.5275691500519603 NRMSE: 0.08988008757721183 MAPE: 410.7808120041584 Pearson Correlation: 0.8060418440451131 Spearman Correlation: 0.6715328823262123 Coefficient of Determination: 0.6391678981001359 RMSE: 0.5448528867018871 NRMSE: 0.10102964707989749 MAPE: 326.85451138303347 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['ZP2', 'RNASE7', 'KIF2B', 'VASP', 'MBD3L1', 'PCAT4', 'CXCL12', 'HOMEZ', 'TEP1', 'NIPAL3', 'C2ORF78', 'UBQLNL', 'SERINC5', 'SIGLEC10', 'C2', 'SELP', 'CD209', 'ARHGAP8', 'CYB561A3', 'ALDOA', 'NODAL', 'SMARCE1', 'EPHX2', 'TGFBR2', 'TCEB2', 'CSRNP2', 'TM6SF1', 'SERPINE3', 'ARPC4', 'CCDC66', 'HSFY1P1', 'RBM39', 'ORAI1', 'PARK7', 'EIF4EBP3', 'FAM129B', 'CPEB1', 'LOC100128239', 'TGFB3', 'SLC26A9', 'AGAP4', 'ARSK', 'C20ORF202', 'TTLL3', 'CDKN1B', 'NOP14', 'PON2', 'REG1A', 'RPE', 'CLRN3', 'PSG3', 'PDF', 'EPC2', 'SLC44A3', 'INGX', 'C1ORF52', 'FAM86C2P', 'DCHS2', 'CENPBD1P1', 'SHMT2', 'LIN37', 'ZC2HC1C', 'SERPINA7', 'CCDC91', 'MUC20', 'VGLL4', 'TPM3', 'SUCLG1', 'TSPAN7', 'KIAA1161', 'NUCB2', 'CPEB2', 'B3GAT1', 'ARHGDIA', 'ATPAF1', 'NDUFA6', 'NAPSB', 'KRT75', 'SLC23A3', 'ZNF454', 'EGFL7', 'FAM90A7P', 'GLB1L2', 'OR1G1', 'IFNW1', 'RASGEF1C', 'RAD52', 'PPID', 'CAST', 'CPEB4', 'ZNF542P', 'OPLAH', 'OR6C2', 'FAM104B', 'NFU1', 'ZNF175', 'SNORA22', 'CIDECP', 'CCDC60', 'OR6M1', 'TPP2', 'POSTN', 'NDUFB3', 'GBP1', 'NUMBL', 'SAA3P', 'MMEL1', 'ADRBK2', 'ABHD6', 'REXO1L6P', 'PAX1', 'RPL36', 'ZNF480', 'EXD3', 'RNMTL1', 'PDGFB', 'KIAA0895', 'PCDH7', 'PTPRJ', 'MYO1B', 'GPR63', 'PF4', 'NDST4', 'FTH1', 'PIGL', 'PARVG', 'BCL2L2', 'MRPL41', 'PRR15L', 'DNPH1', 'ZNF732', 'PROKR1', 'CKB', 'PSRC1', 'JMJD1C', 'REEP1', 'DHFR', 'TCIRG1', 'EML1', 'UGDH', 'SPANXN4', 'TRPV2', 'HMG20B', 'YIF1A', 'PSMD11', 'TRIM64', 'NCEH1', 'B3GALT4', 'ACTR3BP2', 'LINC00174', 'KRT33A', 'SMG1P3', 'COL6A5', 'FERMT2', 'HIST2H2BE', 'THUMPD2', 'CENPO', 'GTPBP10', 'C12ORF66', 'LINC00200', 'RABEPK', 'CATSPERG', 'SLC2A12', 'NXF4', 'OR2A1', 'PDSS2', 'GOLGA6D', 'LOC100240735', 'SNORA54', 'SDC3', 'PPP2CB', 'CELA2A', 'NLRP10', 'CADM2', 'PHF11', 'ZNF417', 'ARFRP1', 'BTN2A1', 'LYSMD2', 'ZNF775', 'KLF14', 'NEUROD2', 'ODF2', 'NTHL1', 'C2ORF50', 'GLIDR', 'SPTLC2', 'CD40', 'MRGPRX2', 'CCDC137', 'OR5H15', 'GUSBP5', 'LAMP2', 'PLCB2', 'CYP3A5', 'LINC00526', 'GTF2B', 'RPS27L', 'LOXL3', 'C12ORF49', 'GLTSCR1L', 'KYNU', 'KLHL24', 'KCNMB3', 'EIF4G1', 'LAT2', 'RAD51B', 'CXORF66', 'TCHHL1', 'CR1L', 'CSRP1', 'YBEY', 'VIMP', 'OLFM3', 'OR2C1', 'TPTE', 'SLC35D2', 'BTG4', 'LGALS7', 'PPP2R1A', 'TAGAP', 'ATP6V1D', 'SLC6A11', 'CLTA', 'ISM2', 'SNX7', 'GJA5', 'CCER1', 'LINC01600', 'TOMM6', 'SULT4A1', 'LECT2', 'PRDX1', 'SSU72', 'SAFB2', 'SNORD116-28', 'MMP16', 'ERAP2', 'SLC9B2', 'SLC25A21', 'LOC152225', 'SZT2', 'PRSS23', 'LINC00523', 'SOWAHA', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.7790302801547012 Spearman Correlation: 0.758023490701961 Coefficient of Determination: 0.6068881773979121 RMSE: 0.2878733163453753 NRMSE: 0.07768874565045063 MAPE: 175.89442441581943 Pearson Correlation: 0.010459387509212504 Spearman Correlation: 0.23662110601557199 Coefficient of Determination: -28.86108297589574 RMSE: 2.543842755292816 NRMSE: 1.0207381369144901 MAPE: 1092.6264486446016 Predictor: ElasticNet Pearson Correlation: 0.6587525015047183 Spearman Correlation: 0.6613115961584626 Coefficient of Determination: 0.40757082584319815 RMSE: 0.3533959572419219 NRMSE: 0.09537142582234424 MAPE: 185.73420872521334 Pearson Correlation: 0.40459000254249644 Spearman Correlation: 0.42274951559576307 Coefficient of Determination: 0.14948065060469862 RMSE: 0.429318481309809 NRMSE: 0.17226762379213573 MAPE: 219.97765937455486 Predictor: RandomForests Pearson Correlation: 0.573492699862162 Spearman Correlation: 0.5313055022466401 Coefficient of Determination: 0.30217595362442995 RMSE: 0.3835449984374275 NRMSE: 0.10350778671462123 MAPE: 235.43638945836446 Pearson Correlation: 0.40282853104470445 Spearman Correlation: 0.4356927024014788 Coefficient of Determination: 0.15228286784132283 RMSE: 0.4286106571986538 NRMSE: 0.1719836034599118 MAPE: 276.904419336328 Fold: 2 Protein: RB1 x_train_column_count: 371 x_train columns: ['TINCR', 'OR4C15', 'TEX9', 'PCGF5', 'LINC00520', 'PEX1', 'GUSBP4', 'RAG1', 'CEACAM20', 'IGSF10', 'TMSB4XP8', 'C16ORF93', 'PKP1', 'RAD21L1', 'SMOC2', 'GINS4', 'ZBED5', 'RBAK', 'SNAR-B2', 'RGL2', 'PCDHA9', 'CAP2', 'ZPLD1', 'COLEC12', 'FAM110D', 'NIT2', 'CD209', 'HCG18', 'FCRL3', 'MAP3K19', 'TOPBP1', 'HIST1H3F', 'BMS1', 'ATAD2B', 'AREG', 'PIN4', 'SLC26A10', 'ENC1', 'DSN1', 'LRRC17', 'TEX36-AS1', 'ALX3', 'TTK', 'PELI3', 'TPTE2P3', 'GOLGA6L1', 'AGTR1', 'CBLL1', 'CDS1', 'CDK14', 'C16ORF70', 'CTAGE4', 'MARVELD2', 'ZRANB2', 'SF3A3', 'ERG', 'CTSG', 'NR4A3', 'KCNJ16', 'SUPT20HL1', 'POU2F2', 'OXTR', 'A4GNT', 'CCDC91', 'PEMT', 'DNAAF5', 'BLID', 'MTUS2', 'NDP', 'ASCL2', 'C1R', 'DSEL', 'RAB40AL', 'BHLHE40', 'VTI1A', 'GGH', 'TCEA1', 'GRIK1-AS1', 'IGF2BP1', 'SERBP1', 'INTS12', 'SNRPB', 'FAM178A', 'COL15A1', 'AMPD1', 'PAK6', 'NPW', 'ZNF676', 'SYNE2', 'IL17D', 'AXIN1', 'NCAPD3', 'POLD3', 'ARHGEF7', 'CCDC39', 'OR9Q2', 'PDP1', 'ULK3', 'IZUMO4', 'CLIP4', 'SOX21', 'KDM6A', 'DNMT3L', 'FXYD6', 'ZC3H12B', 'TM7SF3', 'ASTE1', 'ARFIP2', 'TMEM79', 'QSER1', 'SRXN1', 'PES1', 'TMEM45B', 'RSPH10B2', 'TENM4', 'DHCR7', 'SLC5A9', 'CDC6', 'TAT', 'CHST3', 'EXOSC1', 'SDHAF4', 'PLCE1', 'GKN1', 'HOXB2', 'KRTAP10-11', 'THOC5', 'ERBB2', 'PIFO', 'FRMD3', 'SEMA6C', 'DNAJC5B', 'TRPC5', 'TFAP2C', 'FAM120A', 'PITPNB', 'SLC4A5', 'CCPG1', 'FAM72B', 'RABGAP1L', 'NDUFAF7', 'ABCG2', 'KLRC2', 'ADAMTSL2', 'MORN2', 'PCDHGA11', 'DNAJC18', 'LOC154449', 'IFNE', 'TMEM27', 'SDHAF2', 'TOB2', 'CEP76', 'CFAP221', 'LY6G5C', 'MED25', 'FAM138F', 'NUTM1', 'RGS19', 'SHARPIN', 'RGS2', 'TEX10', 'KLF14', 'ADAMTS16', 'TRIB3', 'CMTR1', 'RPS27L', 'FAM90A1', 'GMEB2', 'PFN2', 'NBR2', 'CCNC', 'ACSM6', 'ARRDC2', 'CFC1B', 'DDX46', 'ADAM28', 'DRG1', 'DDX1', 'YWHAE', 'LRRCC1', 'LSG1', 'PNPT1', 'CRKL', 'B3GALNT2', 'BAIAP2-AS1', 'CDH23', 'COLEC10', 'FBL', 'ADGRF3', 'USP5', 'CEACAM22P', 'NME6', 'BEST2', 'IGFBP3', 'LAMA5', 'ILF3', 'ZNF319', 'CDHR1', 'TXLNB', 'AGAP5', 'DDX20', 'ZCCHC10', 'ACOX2', 'CES3', 'PLA2G2C', 'C10ORF128', 'MYL7', 'PDCD6', 'TNIK', 'LOC286359', 'CCDC168', 'EPM2AIP1', 'STXBP5L', 'HDLBP', 'ABCG1', 'PLXNB3', 'GPR89A', 'DPY19L2P4', 'DUSP12', 'LOC654342', 'ZNF384', 'HIST1H2AE', 'TMEM200B', 'PIK3IP1', 'APOA4', 'GPR4', 'POLR3E', 'NAT8', 'GANC', 'ADIG', 'PREPL', 'RPS3A', 'MORC4', 'PLP2', 'OR2AG2', 'OR5B12', 'LCNL1', 'S1PR3', 'BPIFC', 'BPHL', 'CEP290', 'ANKRD34B', 'ZNF320', 'CASP2', 'SMR3B', 'NLRP3', 'CXADRP2', 'KRT14', 'UBN2', 'EIF3J', 'TBC1D2B', 'KLRC1', 'PDSS2', 'NBPF10', 'LGI3', 'GTF2E1', 'LINC00479', 'MYNN', 'ID2B', 'NUP214', 'C9ORF69', 'USP22', 'FAM65C', 'QRFP', 'WWTR1', 'TRAF3', 'RIMS1', 'CALCB', 'STK19', 'ARL9', 'FBLL1', 'DSG3', 'LONRF3', 'HEATR5B', 'MIPEP', 'SFXN5', 'TIAL1', 'LCE6A', 'MOV10', 'FUT2', 'LYL1', 'SOWAHA', 'ZNF583', 'SCARNA8', 'SHC1', 'SH2D1A', 'UQCR11', 'ROPN1L', 'ADCY10', 'CERS5', 'PAPSS1', 'ZNF81', 'SLC44A1', 'MRPL23', 'CAMK2B', 'LYPD6', 'HHIPL1', 'ADGRG2', 'PSORS1C2', 'XAGE3', 'SEPT7P9', 'AQP1', 'PRR35', 'CAPNS1', 'PCDH18', 'ANKRD34C', 'CRHR1-IT1', 'UGT8', 'TRMT112', 'PDIA2', 'ABCA5', 'MED29', 'HTRA2', 'PLOD1', 'KRBA2', 'TRAF3IP3', 'PDIA3', 'LOC283332', 'STATH', 'EFHC2', 'PIGX', 'C17ORF78', 'IFITM1', 'APOM', 'PRSS38', 'DUS3L', 'ZNF469', 'P2RX3', 'KDR', 'ST8SIA6', 'HOXA2', 'PTBP3', 'C2ORF88', 'SPAG17', 'ABCC4', 'ATP13A4', 'PSMD11', 'TMEM63C', 'TMED8', 'ARMC2', 'TNFRSF14', 'METTL4', 'KCNV2', 'XRCC5', 'GTPBP8', 'GFOD2', 'ARPP19', 'OR4F29', 'ANKRD2', 'RER1', 'TXLNG', 'C11ORF58', 'TTC17', 'CCDC94', 'SNORA21', 'HIST1H2BC', 'RPS12', 'ABCC5', 'KRTAP24-1', 'ECEL1', 'FAM122C', 'NAP1L2', 'ERAP1', 'RAB31', 'TUBB6', 'QSOX1', 'RPS2', 'ZNF593', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.8524586398492272 Spearman Correlation: 0.7986178895557724 Coefficient of Determination: 0.726685732653595 RMSE: 0.12287825420320075 NRMSE: 0.04493792210473989 MAPE: 275.5175125214293 Pearson Correlation: -0.033263364760950404 Spearman Correlation: -0.07352941176470588 Coefficient of Determination: -37.67828955523388 RMSE: 1.5231040555071826 NRMSE: 0.8726289692493397 MAPE: 3304.3312823392207 Predictor: ElasticNet Pearson Correlation: 0.525435701979086 Spearman Correlation: 0.4869541309258157 Coefficient of Determination: 0.23836850686624877 RMSE: 0.20512392960609374 NRMSE: 0.07501606553762936 MAPE: 192.3605512581382 Pearson Correlation: 0.1169344886139513 Spearman Correlation: 0.15576529119110333 Coefficient of Determination: -0.061797425597672095 RMSE: 0.25235782655234623 NRMSE: 0.14458286633151118 MAPE: 245.79940706734314 Predictor: RandomForests Pearson Correlation: 0.6107435884511531 Spearman Correlation: 0.4638148783624242 Coefficient of Determination: 0.21137386721314977 RMSE: 0.20872739986352107 NRMSE: 0.07633389404019934 MAPE: 161.0279778266581 Pearson Correlation: 0.11854778283936288 Spearman Correlation: 0.21878261981722652 Coefficient of Determination: -0.007856995657280264 RMSE: 0.2458642596931958 NRMSE: 0.1408625200199355 MAPE: 193.71474015354787 Protein: CDH1 x_train_column_count: 836 x_train columns: ['RASD2', 'SAMD15', 'NDP', 'SNX29', 'ERCC6', 'GOLGA2', 'TBC1D22B', 'SAXO2', 'PARP4', 'RUNX3', 'ASF1B', 'VSTM1', 'PAG1', 'TBX10', 'MAD1L1', 'SHC1', 'OMG', 'CDH2', 'CASP10', 'ATP6V1E1', 'TAF1B', 'SYNGAP1', 'CREB3', 'SEC1P', 'GLIPR1L2', 'DSCR10', 'MRPL34', 'TMEM132D', 'SARAF', 'NAA15', 'SERPINB11', 'IGFL2', 'CTNNA3', 'ZNF716', 'NUP35', 'AARS', 'ADGRG1', 'C8ORF37', 'OR7C2', 'NHEJ1', 'SLC30A10', 'SLC26A11', 'SF3A2', 'PRAMEF2', 'LHX9', 'SIGLEC9', 'CHML', 'CFHR1', 'MIF', 'TWISTNB', 'CST13P', 'NTMT1', 'NUDT6', 'PSMD7', 'ZNF354A', 'CROCCP3', 'TMEM215', 'GMPPA', 'RAB34', 'RAD52', 'NXN', 'RNF125', 'RHOBTB1', 'CDPF1', 'CSF3', 'DYX1C1', 'PBX3', 'HIST1H2AC', 'OTOR', 'SERPINB12', 'MRPL54', 'GALNT1', 'SIKE1', 'CFAP221', 'FAM177B', 'GALNTL5', 'RPS20', 'CCT8', 'HILS1', 'FILIP1', 'LOC729609', 'FLJ23867', 'ZNF552', 'PALM', 'UGT2B10', 'STEAP1B', 'STK35', 'KCNT1', 'OR4N2', 'ARPC5L', 'IRF4', 'PCDHGA12', 'MYH8', 'AQP12B', 'C9', 'ATP8B2', 'EDA', 'METRNL', 'NRM', 'RASL11B', 'DDX51', 'RABIF', 'BTG4', 'DNAH1', 'SLMO1', 'RPL18A', 'RNF182', 'TTC22', 'RNFT2', 'FBXW10', 'FBXO22-AS1', 'DEFB135', 'ANAPC15', 'SYT16', 'NKG7', 'CRADD', 'ITGAM', 'CCDC30', 'METTL17', 'UMPS', 'GLTSCR1', 'GNPDA1', 'RNH1', 'MEG3', 'MADCAM1', 'APOM', 'SSUH2', 'SH3BP2', 'GAPDHS', 'PPP1R7', 'STPG2', 'CNKSR3', 'GLMN', 'TRIM8', 'ZFP36', 'RPEL1', 'PRPF19', 'RFX2', 'QRFP', 'ADIRF', 'ANKRD36BP2', 'AKIRIN2', 'KDELR3', 'TMEM56', 'TMPRSS15', 'AMY2A', 'GAS2', 'OR10H3', 'PPP1R21', 'SLC22A13', 'TEX26', 'MLXIP', 'CEP104', 'C20ORF194', 'DHPS', 'ZNF486', 'C11ORF24', 'RAD54B', 'HAUS7', 'SALL3', 'PROK1', 'NFIX', 'EMILIN2', 'EIF4E', 'MSRB2', 'STAM2', 'LINC00264', 'LINC00293', 'NPTX1', 'IFT80', 'SYNPO', 'NDOR1', 'DCLK2', 'ZFPM1', 'ZNF513', 'C20ORF24', 'GIMAP8', 'NPPC', 'IFT140', 'KHDC3L', 'PXDN', 'LRRC37A2', 'TMEM116', 'TYW3', 'AHCY', 'SLC5A12', 'NOSTRIN', 'GNB2', 'BUD13', 'CSF2', 'NNAT', 'TNK1', 'CHST8', 'CNGA2', 'ANKRD23', 'NKAIN2', 'BBS7', 'CCL7', 'AMN', 'YTHDC1', 'ALG1L', 'CDK5RAP3', 'MDC1', 'KRBA2', 'ZFP91-CNTF', 'URM1', 'C9ORF69', 'ARFGAP3', 'OR4F5', 'NRXN2', 'TCERG1', 'APOL2', 'MCM2', 'FLAD1', 'GRIPAP1', 'DNAI2', 'UCKL1', 'SCGN', 'SUPT20HL2', 'HNRNPCL1', 'SNORA49', 'GPR65', 'PDGFB', 'PCYOX1L', 'RPL7', 'KCNA3', 'CDC42BPG', 'TMEM150A', 'UBQLN3', 'CNDP1', 'ELMOD2', 'SPATA3', 'RAD51', 'OR12D3', 'PTH2R', 'SRSF9', 'HCG18', 'TCEAL1', 'DDX53', 'XRCC3', 'TSPAN2', 'FAM208A', 'LGALS4', 'LRRC7', 'FOXS1', 'ZNF251', 'DEFB115', 'WNT11', 'C17ORF77', 'NKX1-2', 'SNORA12', 'DEFB119', 'FMO9P', 'SYS1', 'ME2', 'NFX1', 'PEX2', 'CIAO1', 'PAIP2', 'H2BFM', 'ACSL1', 'TP53BP2', 'C11ORF49', 'APPL2', 'C11ORF71', 'GALNT16', 'LMF1', 'MRO', 'SMPD2', 'PDIA2', 'B3GNT8', 'SSBP3', 'HOOK2', 'HIST1H2BJ', 'SLC17A6', 'RAB3B', 'PDE1A', 'HBP1', 'FRMPD2', 'RNF169', 'FBLIM1', 'TAF6L', 'COL1A2', 'LINC00896', 'SLC4A2', 'LIPI', 'AFF1', 'C17ORF75', 'FBXO21', 'PLLP', 'ADRBK1', 'SRD5A1', 'LOC284441', 'OR52W1', 'SBSN', 'NKRF', 'SAV1', 'CKAP2L', 'CHEK2', 'TRMT1L', 'CSNK2B', 'UGT2B4', 'EML5', 'TUBB4B', 'KLHL7', 'SDSL', 'GOLGA2P6', 'RRAS2', 'ZNF436', 'RFC4', 'OR2C1', 'C15ORF26', 'A1BG-AS1', 'KMT2E', 'RAP1GDS1', 'GPR141', 'ZDHHC16', 'CPSF2', 'LPPR3', 'GCH1', 'TNNT2', 'NAGA', 'FOXK1', 'RAB42', 'GATA1', 'PVALB', 'CLEC2L', 'CYSTM1', 'PSMB7', 'SAMD4A', 'LKAAEAR1', 'PQLC1', 'WASH2P', 'RBMXL3', 'INS', 'DDX3Y', 'PAPOLA', 'TNFSF18', 'USE1', 'SLC5A6', 'SYNE3', 'S100A3', 'DENND4B', 'FAHD1', 'PPP6R2', 'SNORA40', 'SLC25A53', 'TMEM47', 'PIGV', 'GFI1B', 'BARHL2', 'TSPAN12', 'PPP1R13B', 'TMPO-AS1', 'PRPF3', 'SCAMP3', 'DPH2', 'NLGN2', 'NRDE2', 'ZNF487', 'C4ORF32', 'C6ORF89', 'PNN', 'PRRG2', 'TMEM26', 'CECR5', 'POSTN', 'DNAH9', 'FABP6', 'APOBR', 'ABAT', 'KCTD10', 'SCML4', 'PTER', 'SLFN13', 'YME1L1', 'KRTAP24-1', 'CTTNBP2', 'RTF1', 'GTF3C2', 'CHST13', 'HPGDS', 'OR9I1', 'GAPVD1', 'ENAM', 'ITFG2', 'OPRK1', 'PUS3', 'EPPIN', 'SF3B6', 'PCK1', 'PLCG2', 'RPS12', 'PPFIA2', 'MMP1', 'SLC35F6', 'STARD5', 'SFTA2', 'ZNF574', 'MUC21', 'RASGRP2', 'MAP7D1', 'C11ORF16', 'TDRG1', 'SUSD3', 'NDRG1', 'ACTL6B', 'CLEC16A', 'YIF1B', 'CSRNP3', 'LOC100190986', 'MAP3K19', 'SPATA33', 'KISS1R', 'CXCL8', 'VPS36', 'RNF17', 'STEAP3', 'NDUFAF6', 'SNORA5C', 'SLC33A1', 'C15ORF62', 'FAM104A', 'SDS', 'LSM2', 'PELI3', 'PRSS22', 'RAB33B', 'ZNF25', 'WNK3', 'NDUFAF1', 'STK16', 'PTPRC', 'MGC27382', 'PCID2', 'PCDHGC3', 'IHH', 'SCHIP1', 'PGM2L1', 'PABPC1L', 'SNX12', 'NF1', 'GCC2', 'PANX3', 'BIN3', 'XRN2', 'GTF2B', 'RNASEH2B', 'RPL19', 'LINC00696', 'ZNF208', 'TMC3', 'CCDC110', 'CILP2', 'TOR1AIP2', 'MYCNOS', 'SPAG11B', 'RPSAP9', 'INE1', 'TSPYL2', 'HIST1H1D', 'CNNM3', 'BDNF-AS', 'CCT6A', 'NXNL2', 'ZKSCAN2', 'ENC1', 'CD1D', 'ACSS1', 'UNC93A', 'RASAL3', 'COL4A6', 'MPV17L', 'DNM1P46', 'MRS2', 'TBXAS1', 'LPO', 'TMEM81', 'ARF5', 'UST', 'PPP1R1B', 'DSC1', 'WWOX', 'CD99L2', 'SMCR5', 'ADGRF1', 'SNORA71E', 'BTBD6', 'ELK1', 'SMO', 'LRRC57', 'PLAGL2', 'HIVEP2', 'KIAA1551', 'CENPBD1', 'KRTAP19-6', 'IFT88', 'CDKL2', 'RNMT', 'UGCG', 'SCARNA21', 'C6ORF52', 'EHD3', 'GALR1', 'AMH', 'HSPB3', 'COL5A3', 'KLK11', 'CATSPERB', 'NKAP', 'PAPPA2', 'NLN', 'IFNB1', 'LINC00620', 'SFPQ', 'TIMM17A', 'CELA3A', 'CCDC122', 'TMEM252', 'EXT2', 'HS6ST2', 'RMRP', 'NKD2', 'CEACAM4', 'LINC-PINT', 'SMIM10L2A', 'FOXI3', 'IFITM5', 'SREK1', 'MON1A', 'U2AF1', 'CLMN', 'ECHDC3', 'ELK3', 'HMOX2', 'RABGGTA', 'GCLC', 'MOV10', 'CCDC178', 'SERINC2', 'LINC01106', 'KIAA0556', 'CFAP69', 'CTTNBP2NL', 'FBRS', 'FMNL2', 'GFPT1', 'COMMD2', 'OR2Y1', 'GPLD1', 'MEPE', 'ASB16', 'MRAP2', 'TGM7', 'WFDC8', 'EHMT1', 'ADAM2', 'EBP', 'PUS7', 'ADCY1', 'COMT', 'ARRDC2', 'CTSW', 'NOP58', 'FCAMR', 'PPIP5K1', 'MDP1', 'NEGR1', 'DCAF12L2', 'XRCC1', 'INPP5D', 'MTMR4', 'ABT1', 'PHF2P1', 'APOPT1', 'CCDC159', 'NCAPG2', 'ZZZ3', 'DAD1P1', 'CIT', 'SCARNA15', 'TAAR1', 'DLEU2L', 'ZNF768', 'TTC31', 'CCL8', 'TAS1R3', 'MS4A15', 'TMEM225', 'PTPRF', 'LINC01366', 'DTD2', 'C1QTNF9B-AS1', 'PDCD1', 'COL6A4P1', 'ACTA2', 'SPATA31A5', 'OR4K15', 'EIF4G3', 'SLURP1', 'GRSF1', 'SAP30BP', 'GCNT4', 'OR1E2', 'TIGD2', 'SLC6A17', 'CCDC148', 'LINC00936', 'LINC00238', 'MLF1', 'SCG5', 'ITGB3BP', 'PLBD2', 'ABCB7', 'NCR3LG1', 'CCL18', 'CHIA', 'SLC6A12', 'FHL5', 'GPR52', 'RAD1', 'CCDC85C', 'CWC27', 'NUBP1', 'SCARNA18', 'UQCRH', 'CCNC', 'ZC3H7A', 'CANT1', 'MTERF4', 'TGM5', 'FAM195B', 'LINC01020', 'TMBIM6', 'MME', 'IL17RB', 'EIF2AK4', 'SYT17', 'REG1B', 'PTGFR', 'RPN2', 'CAPS2', 'NR2F6', 'C2CD4D', 'LRP12', 'KRT12', 'KIAA1324L', 'CLMP', 'KLF2', 'ZNF286B', 'HGD', 'USP17L9P', 'PLCL1', 'REM1', 'TCF7L1', 'NAALAD2', 'AXIN2', 'CFD', 'HOMEZ', 'GNB1L', 'TH', 'FANCE', 'STAG1', 'UROC1', 'MOB3C', 'OR8B12', 'P2RY4', 'PEX5L', 'STARD7', 'EGOT', 'DNAJC30', 'SNAR-B2', 'TRIT1', 'TIMP3', 'HAND2-AS1', 'RHBDD2', 'COL10A1', 'FAT1', 'C1QTNF9B', 'DEPDC1', 'ONECUT3', 'ANKRD39', 'AK7', 'MARVELD3', 'YLPM1', 'DDX60L', 'GRIN2B', 'RELB', 'SMYD2', 'ANAPC4', 'TRADD', 'STAG3L2', 'OOEP', 'RACGAP1', 'LOC221122', 'GUCY2F', 'TPSB2', 'NXF2B', 'ACAP1', 'OR11H1', 'JADE1', 'MARK2', 'SUPT20HL1', 'RIMBP2', 'KRTAP9-8', 'ZNF578', 'PRDX1', 'IRF2BP1', 'ANTXR1', 'COL8A1', 'PLK5', 'HABP2', 'COQ10A', 'SORCS1', 'XIRP1', 'THBS3', 'NLGN1', 'BPGM', 'ZNF17', 'TPD52L2', 'FAM58A', 'ASIP', 'DVL2', 'ZNF548', 'OR5W2', 'MT1DP', 'DDX39A', 'FAM212A', 'PDIA3', 'DEAF1', 'ADGRG3', 'DEGS2', 'DNALI1', 'SULT2B1', 'SREBF2', 'MMRN1', 'PYCR1', 'ANK3', 'CHRAC1', 'RBX1', 'CLDN9', 'IMPA1', 'SERPINB5', 'PGAM2', 'UBE2N', 'TXNL1', 'RAD9A', 'ZAR1L', 'COL11A2', 'SCAF4', 'OR2B2', 'LETM1', 'GRPR', 'MLEC', 'GALNT11', 'FRMD7', 'RSU1P2', 'ZNF367', 'GRAMD4', 'NUBPL', 'HSPB8', 'MPZ', 'HES4', 'TTC16', 'SFMBT2', 'FLJ42393', 'AP5Z1', 'LRRC3', 'WAS', 'PRMT2', 'TUBA1B', 'TSSC4', 'C5ORF58', 'OR52D1', 'TMEM141', 'MAPK10', 'CXORF56', 'ICAM1', 'ARF4', 'BTBD9', 'C5ORF60', 'OR2M1P', 'GLT6D1', 'RPS9', 'RAB19', 'GYPE', 'ATG12', 'NYX', 'ZNRD1', 'TMF1', 'GAS7', 'C1ORF68', 'SYDE2', 'DDX56', 'EEF2K', 'KRT18P55', 'NDNL2', 'WWC2-AS2', 'RNU4ATAC', 'CSMD1', 'IKZF4', 'CFAP36', 'NDUFS8', 'CETP', 'AXL', 'CYTL1', 'CYP8B1', 'RXFP4', 'LCA5L', 'SHMT1', 'CDH24', 'LTBP2', 'PRR26', 'ATG4B', 'ZMAT1', 'SPECC1', 'ZNF326', 'FAS', 'ARL4C', 'SGPL1', 'SLK', 'C22ORF34', 'CHCHD3', 'CTSA', 'LILRA5', 'GCA', 'AKR1B10', 'CES2', 'FAM160A2', 'MRPL10', 'SLC35A1', 'DNAJA2', 'RBP5', 'ABCD4', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 4.585472114205707e-15 NRMSE: 7.356175686541602e-16 MAPE: 3.955344095454654e-12 Pearson Correlation: 0.3398356277392061 Spearman Correlation: 0.382055409228368 Coefficient of Determination: -2.1765504943618343 RMSE: 2.050736075334788 NRMSE: 0.36418683632299553 MAPE: 536.8747516292883 Predictor: ElasticNet Pearson Correlation: 0.8997960837593205 Spearman Correlation: 0.8528734388740395 Coefficient of Determination: 0.7842276918173932 RMSE: 0.5205320058023816 NRMSE: 0.08350557564809201 MAPE: 316.57743396475325 Pearson Correlation: 0.5209139966775337 Spearman Correlation: 0.5616476441322799 Coefficient of Determination: 0.1271096249887521 RMSE: 1.0750081135656162 NRMSE: 0.19090891734427565 MAPE: 328.40035595798105 Predictor: RandomForests Pearson Correlation: 0.7766185454221294 Spearman Correlation: 0.6834575165066699 Coefficient of Determination: 0.5975542074776214 RMSE: 0.7108914320564961 NRMSE: 0.11404370450894298 MAPE: 133.5296936075005 Pearson Correlation: 0.6607538357696111 Spearman Correlation: 0.6549263486489124 Coefficient of Determination: 0.4018845022775105 RMSE: 0.8898655982088642 NRMSE: 0.15802976348940936 MAPE: 208.84877376662567 Protein: CDH2 x_train_column_count: 474 x_train columns: ['C19ORF12', 'CHTOP', 'DUPD1', 'MT1B', 'SNORD22', 'TMSB4XP8', 'ACOX2', 'TMEM80', 'CCL26', 'LCE1F', 'XPNPEP1', 'CRX', 'NOL6', 'CMTM8', 'ADAM33', 'ABCA8', 'CLPP', 'ZC3H13', 'IL27RA', 'IL1F10', 'SLCO2A1', 'NUP62CL', 'TCP10L', 'KIFC2', 'GPRC5D', 'RNF44', 'CCDC105', 'ZNF444', 'ATP2B2', 'MOBP', 'PSAT1', 'EED', 'VPS26B', 'AACSP1', 'CCRL2', 'RASSF9', 'DUSP28', 'FADS2', 'TAF1D', 'ZKSCAN3', 'C5AR1', 'MPLKIP', 'RFWD3', 'PTRH2', 'OR52B4', 'SLC25A47', 'ANKRD29', 'PPP2R3A', 'KIAA0513', 'EPS15', 'GFPT2', 'COTL1', 'SRSF4', 'MAGEF1', 'SEMA4B', 'TECPR1', 'REXO1', 'ITM2C', 'OR1I1', 'ZIK1', 'PCM1', 'UBL3', 'MEDAG', 'TTYH2', 'MTCH2', 'ANTXR1', 'KCNK12', 'ZNF527', 'ZNF764', 'SLC25A11', 'MSR1', 'FUBP3', 'TLN2', 'UGT1A4', 'ASUN', 'LOC494141', 'MTG1', 'CLEC14A', 'SNX1', 'PRX', 'CHMP1A', 'TRPM7', 'PARP9', 'DCAF13', 'IL18R1', 'KRTAP13-1', 'SAR1A', 'GLT8D2', 'GHRHR', 'CHST6', 'SLC35G2', 'ADIPOQ', 'IQCF6', 'ZNF649', 'TGFBR2', 'PDCD2', 'ITGB7', 'ARG1', 'FSHB', 'SETD8', 'C7ORF72', 'FOXD4L1', 'SSH2', 'CASP6', 'ZNF648', 'OR1S2', 'SLC1A7', 'FUT6', 'PTGER2', 'ACP6', 'C6ORF141', 'ZBTB24', 'AGPAT3', 'GRM7', 'SEMA3E', 'NR6A1', 'AFTPH', 'OR5L1', 'ST3GAL2', 'MED19', 'IDH3G', 'MAP2K3', 'TMEM102', 'KIAA0930', 'SP3', 'ANKLE2', 'KIAA0754', 'RAP2A', 'RBMXL2', 'SNRPD3', 'LINC00847', 'OR10Z1', 'LINC01550', 'CLEC17A', 'FAM179B', 'STAP1', 'TXNDC16', 'PTCHD3', 'RPIA', 'CFAP20', 'TTC17', 'GFAP', 'WHAMM', 'OR2T2', 'CRYGC', 'SRCAP', 'ADGRG4', 'SLC29A4', 'CTSF', 'MUM1L1', 'CETP', 'SAA4', 'ELAC1', 'OR5K2', 'SPC25', 'PDX1', 'ECI2', 'MBOAT7', 'C5ORF51', 'MMRN2', 'OSBPL5', 'CCDC132', 'CAB39L', 'CCNI', 'BTBD10', 'PLA2G5', 'MGAT4A', 'ISG15', 'SAV1', 'PFDN6', 'IRX1', 'GZMH', 'MUC12', 'CYR61', 'R3HDML', 'ZMPSTE24', 'MFSD6L', 'RBM25', 'OTOL1', 'CRY2', 'CITED4', 'SNORD15A', 'UMODL1', 'SOX10', 'AGAP2', 'KRT25', 'FADS1', 'GSK3B', 'DYNC1H1', 'ACSL4', 'PHF11', 'GJB6', 'ABI1', 'BAAT', 'RTKN', 'USP32P2', 'LIMK2', 'C22ORF42', 'DFNA5', 'SCD5', 'RINL', 'APOB', 'SLED1', 'DNASE2B', 'RBM38', 'HELZ', 'CLTCL1', 'FBXO8', 'AAAS', 'OR4C11', 'WWP2', 'CRB3', 'ELMOD1', 'NTM', 'TDP2', 'FNDC5', 'NPNT', 'UBA3', 'RAD9B', 'RPS23', 'DHX29', 'CD248', 'ATF5', 'SNX12', 'CDH13', 'TMEM251', 'TDO2', 'DKK1', 'FER1L5', 'BRMS1L', 'MYH7', 'WBP1', 'HNRNPAB', 'C12ORF54', 'NKAIN4', 'TYW5', 'LRRC41', 'C8ORF34', 'ICOSLG', 'GFM2', 'SPDYE3', 'ZNF589', 'GLTSCR2', 'CT47A7', 'DYNC1I1', 'STK3', 'TTC30A', 'RARS', 'JSRP1', 'RIPK1', 'PXDC1', 'ZRANB3', 'ZBTB48', 'GEMIN8', 'CACTIN', 'RPE', 'SPATA9', 'TSHZ1', 'RGPD8', 'RCHY1', 'MYSM1', 'HOXB13', 'ERP29', 'NTNG1', 'SLC44A5', 'FEZ1', 'ADGRG5', 'PPP1R12B', 'CRACR2B', 'CNDP2', 'PRH2', 'RANBP3L', 'FLJ16779', 'PRR26', 'OR2V2', 'ATP6V1G3', 'FLNC', 'TMEM169', 'CCDC47', 'GPR35', 'TCHHL1', 'SAMD12', 'RBMXL3', 'SCML2', 'MGST3', 'LCE1B', 'TIMM17B', 'AARS2', 'RAPGEF3', 'ATXN1', 'ZBTB32', 'TCP10L2', 'HIST1H4K', 'ANKS3', 'LSM3', 'FAM20A', 'CCDC88A', 'GPC3', 'CNIH3', 'RGS19', 'DNAJA1', 'RPL8', 'SLC25A46', 'PREB', 'DDR1', 'MT3', 'PPP2CA', 'RASSF10', 'SBF1', 'KLHL23', 'LANCL3', 'FAM69B', 'HBM', 'CENPV', 'KHDRBS1', 'RBSN', 'GGTLC2', 'LOC391003', 'KRTAP13-2', 'ST7-AS1', 'TMED5', 'PSMC1', 'THBS4', 'SYNJ1', 'GRN', 'WDR5B', 'SLC22A16', 'PRUNE2', 'CCDC74A', 'PCDHB9', 'OR4C15', 'CLK3', 'GSTA1', 'STKLD1', 'CCDC103', 'PVALB', 'ZNF300', 'BAG2', 'NINJ1', 'FAM161B', 'DNAH3', 'GCM1', 'C17ORF99', 'SP4', 'WNT8B', 'ATP5EP2', 'CDC42BPG', 'WDR38', 'SDHB', 'ZNF526', 'IL25', 'SEMA6A', 'ACOT7', 'SAPCD2', 'PYGM', 'CST9L', 'PGA5', 'UCP2', 'LOC401052', 'SIRT3', 'GNAI3', 'MAN2A1', 'KIF7', 'AP3S1', 'PTPRS', 'TSPAN19', 'PLOD3', 'H2AFJ', 'UVRAG', 'STH', 'FAM216B', 'CRAMP1L', 'BTBD6', 'MN1', 'INSL3', 'TATDN3', 'MYL7', 'RASSF5', 'DRD2', 'RPL17', 'TRIP10', 'CDO1', 'CBLB', 'ARHGAP12', 'RFNG', 'BCL7A', 'SUSD6', 'ASB16', 'CRTC2', 'NME4', 'GTF2H3', 'RPL32P3', 'ANP32E', 'HAR1B', 'CNR2', 'SCUBE2', 'IFNK', 'HMBS', 'UBE3C', 'ZNF687', 'ADAM28', 'ITGA9', 'OR9A4', 'VPS37D', 'TMEM45B', 'PLIN5', 'ERMARD', 'SETX', 'CELF6', 'CYP2C19', 'ZNF304', 'TMEM74B', 'LCNL1', 'SLC35C1', 'LINC00111', 'KLHL15', 'LETM2', 'AFAP1-AS1', 'KIR2DL1', 'NGLY1', 'ZC3H10', 'KHK', 'CREBRF', 'WNT9A', 'BPIFA4P', 'ENC1', 'RPS6KA3', 'TUBB7P', 'CA9', 'GRM5', 'TAF5', 'EXOSC7', 'BCHE', 'OR5T1', 'CCR5', 'OR9Q2', 'OR5AR1', 'NADK2', 'FAM134C', 'PDILT', 'TRPC6', 'ARL17A', 'LHB', 'IGF2', 'DNAJC5', 'OR2M5', 'UBXN11', 'BHLHE40', 'FAM90A1', 'TLN1', 'ROS1', 'DMGDH', 'GPR158', 'SRGAP2', 'PGM2', 'SECISBP2', 'TRIM34', 'LOC646214', 'GREB1L', 'IQCF5', 'TTN', 'NETO1', 'TMEM107', 'RPL23AP64', 'TRIM32', 'PRSS55', 'OR5D16', 'TEX14', 'POLR2L', 'UGT8', 'PCDHA2', 'CMSS1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.9467384724015053 Spearman Correlation: 0.923988223458272 Coefficient of Determination: 0.8963137351251358 RMSE: 0.1185289427012977 NRMSE: 0.04294838129621629 MAPE: 256.56441864815747 Pearson Correlation: 0.05766457086881783 Spearman Correlation: -0.08095307774851235 Coefficient of Determination: -347.35454673734887 RMSE: 7.224568237714613 NRMSE: 3.8060701821831624 MAPE: 1512.3906077979661 Predictor: ElasticNet Pearson Correlation: 0.6665277524777905 Spearman Correlation: 0.6261791894938714 Coefficient of Determination: 0.3740428191497984 RMSE: 0.2912299987778899 NRMSE: 0.10552576229360458 MAPE: 384.63469772540833 Pearson Correlation: 0.23779293800491128 Spearman Correlation: 0.2822749000097552 Coefficient of Determination: 0.05522148039956254 RMSE: 0.3762410355630777 NRMSE: 0.19821250760631434 MAPE: 233.65007515317404 Predictor: RandomForests Pearson Correlation: 0.571281445791169 Spearman Correlation: 0.4731857397447825 Coefficient of Determination: 0.17802398422045684 RMSE: 0.333728555140606 NRMSE: 0.12092490584122256 MAPE: 1141.4356224681192 Pearson Correlation: 0.21973599743938466 Spearman Correlation: 0.2846941761779339 Coefficient of Determination: 0.04220157031366867 RMSE: 0.378824637312596 NRMSE: 0.19957360895630846 MAPE: 147.90663489957916 Protein: CDH3 x_train_column_count: 75 x_train columns: ['TMEM180', 'GOLGA7', 'SLC25A52', 'TRAM1L1', 'ZBTB17', 'LRRC10B', 'LINC00483', 'CBX2', 'OSBP2', 'OXCT1', 'PLSCR4', 'HSPBAP1', 'RND3', 'HIST1H4G', 'LETM2', 'BLNK', 'GOLGA8F', 'UBR2', 'PRAMEF5', 'CKS2', 'C22ORF24', 'MTG1', 'SHMT1', 'NAPEPLD', 'SEC14L4', 'WSCD1', 'DAAM1', 'CBX4', 'DAW1', 'ILF3', 'SREK1IP1', 'SNORA45B', 'AHCYL2', 'GPATCH4', 'RNF145', 'UBAP2L', 'ANAPC2', 'IRGM', 'TAPBP', 'TEX43', 'SLC4A10', 'TTC41P', 'DHX29', 'SLC39A14', 'ADCY10P1', 'TCEAL1', 'PHF2', 'IP6K1', 'NUAK1', 'ZDHHC1', 'STRIP1', 'USP35', 'HELQ', 'TTC16', 'MED10', 'FAM26F', 'BEND3P3', 'ENTHD2', 'NDUFV2', 'ZNF800', 'PROL1', 'SHISA7', 'SLCO6A1', 'MYOCD', 'VAMP2', 'SERTAD4-AS1', 'PDE6G', 'MED12', 'CYB561A3', 'PPCDC', 'TBCCD1', 'BCAP29', 'TMEM37', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.5438903649832053 Spearman Correlation: 0.534792156282311 Coefficient of Determination: 0.2958167291215642 RMSE: 0.17429838830876063 NRMSE: 0.1311766787148334 MAPE: 328.6062205368252 Pearson Correlation: 0.21730774950268306 Spearman Correlation: 0.3102331479855624 Coefficient of Determination: -0.23540925182397365 RMSE: 0.21999436395486158 NRMSE: 0.18102062367716745 MAPE: 1734.2441782453855 Predictor: ElasticNet Pearson Correlation: 0.4913315358101694 Spearman Correlation: 0.49024967516094753 Coefficient of Determination: 0.22643804083048114 RMSE: 0.18268297350269516 NRMSE: 0.1374869036619141 MAPE: 254.1320707047135 Pearson Correlation: 0.1831379761176587 Spearman Correlation: 0.28072870939420547 Coefficient of Determination: -0.15667724644437397 RMSE: 0.2128689050670645 NRMSE: 0.17515749614668355 MAPE: 1214.4764247271703 Predictor: RandomForests Pearson Correlation: 0.5269437508906858 Spearman Correlation: 0.5374565361253693 Coefficient of Determination: 0.25989894986250217 RMSE: 0.1786882641037099 NRMSE: 0.1344804919763307 MAPE: 367.50885885719913 Pearson Correlation: 0.0953387567498667 Spearman Correlation: 0.16203784996585702 Coefficient of Determination: -0.22057068439162686 RMSE: 0.21866919064182733 NRMSE: 0.1799302152899098 MAPE: 1391.2239978651692 Protein: PTEN x_train_column_count: 886 x_train columns: ['FAM223B', 'NME2P1', 'ACSL4', 'PMP22', 'HLTF', 'ZMAT3', 'LRRC42', 'GUCY1B3', 'ANKRD37', 'FKTN', 'IL17D', 'MYLK2', 'RD3', 'S100A1', 'GGT3P', 'TNNT3', 'SMOC2', 'S100A9', 'UBE2W', 'BLK', 'LYPLA2', 'SRI', 'PCMTD1', 'OR8D2', 'ZNF705D', 'ZC2HC1B', 'KRBOX4', 'PNMT', 'KRTAP19-3', 'GAGE2B', 'MARCKS', 'NACC2', 'ZNF140', 'GALNT2', 'ABCB8', 'MYL4', 'FOXR2', 'OR51G1', 'SLAMF1', 'CAMK2B', 'MMP10', 'ROBO3', 'NUDT18', 'TMED7', 'TNFAIP8', 'SBNO1', 'RGP1', 'MX2', 'ZNF252P', 'MFAP3L', 'BAGE', 'CDKN3', 'LACC1', 'C10ORF71', 'HSF2BP', 'LINC01587', 'FSIP1', 'PTP4A1', 'PSMC1', 'ACD', 'DNPEP', 'CCDC176', 'PANK3', 'DRAIC', 'OR51F1', 'GJA5', 'TCAF2', 'CNN2', 'KRTAP9-8', 'DMRTB1', 'SNRPD2', 'ATE1', 'RMST', 'MCM3AP-AS1', 'ODF3B', 'RPL23AP64', 'SLC22A2', 'POU2F3', 'GRPEL2', 'EDIL3', 'TP53INP2', 'NNAT', 'ANKRA2', 'DOCK11', 'CCDC185', 'XKR7', 'FAM120AOS', 'ALS2CL', 'EN1', 'ADCY10P1', 'ZSCAN12', 'SNHG20', 'PAEP', 'GPX6', 'SKIDA1', 'DDX56', 'PAX2', 'SMIM11', 'OSBPL7', 'ARPP21', 'ADGRG4', 'RNASEH2C', 'ZNF717', 'PCDHGA10', 'RECQL4', 'GUCY1B2', 'PHKB', 'TSPAN14', 'RSU1', 'REXO1L1P', 'LPCAT3', 'SNORA53', 'PROC', 'OSGIN2', 'ELK4', 'NKAPL', 'SLC6A1', 'NBEAL1', 'CNTFR-AS1', 'HIP1R', 'STOM', 'ZNF668', 'CMTM1', 'LINC00596', 'NLGN4X', 'C1ORF174', 'PGP', 'LBHD1', 'RABGGTA', 'VPS37B', 'XKR3', 'ANO8', 'MFF', 'CALY', 'SMAD1', 'SLC7A5P1', 'AZIN1', 'SYTL3', 'SLC25A51', 'NARS', 'OR6B1', 'MATR3', 'SFTPC', 'FAM60A', 'ZSCAN29', 'FAM138E', 'STUB1', 'FBXL12', 'PSMD5', 'LRRC14', 'VWA5B1', 'LIMK1', 'SUSD2', 'OR6C1', 'KLHL20', 'ARG1', 'CLMP', 'GOLGA8G', 'METTL23', 'OR51B2', 'GLCCI1', 'FAM63A', 'RNFT2', 'VLDLR', 'RNF121', 'ZFAND4', 'SELPLG', 'SEZ6L2', 'ZNF609', 'KCNJ1', 'AEBP2', 'TMEM132B', 'KRT27', 'OR1L8', 'FAM26E', 'ZNF491', 'CFAP43', 'C8ORF46', 'HPRT1', 'ADH7', 'SIPA1L1', 'TMCO5A', 'SLC35A5', 'FBXO41', 'NALCN', 'NAIP', 'TTLL10', 'ZNF137P', 'ZNF182', 'IL17A', 'NEFM', 'HIF1A', 'HACD1', 'LRRTM4', 'KLHL3', 'ELOVL1', 'IL2', 'DAAM2', 'IRF2BPL', 'ZC3H14', 'MLH3', 'TMPRSS5', 'IGSF8', 'KCNE5', 'MAN2B2', 'ADAMTS5', 'SDC3', 'UGT1A6', 'TRAPPC11', 'KIAA1143', 'ANKHD1-EIF4EBP3', 'QTRTD1', 'RSRC1', 'EML6', 'LINC00479', 'PLEKHA8', 'LRTOMT', 'GABRB2', 'MAT2B', 'DOCK10', 'MPLKIP', 'POU3F2', 'EWSAT1', 'SMCO2', 'ZNF33A', 'ZBED9', 'RAB40A', 'GRM5', 'CHAMP1', 'MFAP5', 'ZFYVE28', 'FOXO3B', 'MRPL2', 'BIRC3', 'MRPL9', 'AGA', 'CCR5', 'TBP', 'ARHGAP5-AS1', 'ZPR1', 'TEX13B', 'B9D2', 'GNG13', 'C1ORF168', 'OTOL1', 'NDUFB2-AS1', 'FAM74A1', 'NOTCH3', 'KGFLP1', 'ELK3', 'PITPNM3', 'OR5AR1', 'SNORA54', 'FBXL6', 'EPB41L4A', 'SAMD5', 'MEIS3P1', 'ROBO4', 'SNAP91', 'TDG', 'ZNF641', 'NFIB', 'KCNA2', 'PSG2', 'SDHAF3', 'SACS', 'PAH', 'PIAS3', 'NME1', 'WFDC13', 'SUPT4H1', 'EGFL6', 'SYCE3', 'CACTIN', 'KLF12', 'MDFI', 'OR3A1', 'PARPBP', 'UGT2B7', 'CYP4F8', 'C8ORF74', 'TMEM63A', 'LINC00917', 'ZCCHC14', 'ZNF484', 'MICU3', 'ZNF595', 'LUZP1', 'RPS10', 'KRT26', 'GLYATL1', 'DOCK7', 'HSFX2', 'SFTA3', 'OR5M1', 'PACSIN2', 'CCDC85C', 'APPL2', 'C1ORF226', 'FIRRE', 'GCNT4', 'PIGA', 'CATSPER3', 'LINC01553', 'ZNF77', 'TMEM52B', 'TCHP', 'CHP1', 'LAMA4', 'DEFB131', 'STRADB', 'ITGB5', 'EIF3A', 'BTBD10', 'DTWD2', 'VPS13D', 'TBX19', 'PRDM4', 'RP9P', 'VPS4A', 'TMED10', 'RFK', 'OSTC', 'RPRM', 'FBXW10', 'TMEM205', 'LINGO2', 'ZC3H8', 'USP51', 'NUDT8', 'C1D', 'ABCC13', 'FHL5', 'SLC44A4', 'SYT8', 'DUSP23', 'TSHZ1', 'LINC00092', 'TCAIM', 'FAR2', 'LSMEM2', 'SMARCA4', 'TMEM185A', 'MBNL1', 'XRCC5', 'ZNF75D', 'PRUNE', 'COMMD4', 'PSMG3-AS1', 'FFAR4', 'ZNF763', 'MCM4', 'SOD2', 'OR13A1', 'MXD4', 'ZNF674', 'APOA4', 'NME9', 'TCEAL1', 'LCE1C', 'LNPEP', 'TIMMDC1', 'PGF', 'UNC119B', 'USP27X', 'HAP1', 'FLJ16779', 'SH3BGR', 'SUGCT', 'CTAGE1', 'TBC1D28', 'GPR182', 'NUSAP1', 'MAP3K11', 'XCR1', 'ADIG', 'FERMT3', 'EPDR1', 'SIGLEC9', 'PTX4', 'LINC00961', 'RRAGD', 'UPK3B', 'CST4', 'PTENP1', 'RTN1', 'OR2A12', 'FAM76B', 'TIAM2', 'C4ORF48', 'FBN2', 'PPAPDC1B', 'CCDC67', 'HACD2', 'GML', 'PSMD12', 'FRMD3', 'C20ORF194', 'VWA5B2', 'IL22RA1', 'STAT2', 'RGS9', 'SYT1', 'PDCD6', 'GAGE12D', 'LINC00314', 'ARHGEF19', 'C4ORF22', 'C5ORF52', 'MYNN', 'OR11H12', 'KPTN', 'OR4K17', 'GJD3', 'GMCL1', 'IMMT', 'CCIN', 'LOC100272216', 'RSC1A1', 'CCDC7', 'NDUFV1', 'WDFY1', 'POLB', 'SULT2B1', 'PAX8', 'GMFB', 'C19ORF54', 'RNF111', 'TRIM16', 'SLC14A2', 'ZNF486', 'INSL5', 'SPACA3', 'IGF1', 'ANKHD1', 'FBXL14', 'MBD3L2', 'SPNS2', 'FZD6', 'MIDN', 'MED11', 'ABHD13', 'L2HGDH', 'RSPO1', 'H2BFWT', 'PCDHA9', 'ZIC1', 'HMOX1', 'KIAA1107', 'DCLRE1A', 'LOC100129034', 'OMP', 'FBXL19', 'GALNT6', 'WDR49', 'GPR173', 'NIPA2', 'GHRHR', 'MUC4', 'ACTR1B', 'COLQ', 'RBP3', 'SLC45A3', 'KIF26A', 'CNOT4', 'SLC12A9', 'IMPA1', 'BTNL9', 'LINC01011', 'HCRT', 'RASEF', 'GOLM1', 'SCRN1', 'FAM196B', 'MMEL1', 'ANKRD53', 'THEM6', 'ZYX', 'NCOR1P1', 'ERCC2', 'TMEM206', 'DDIAS', 'ZNF131', 'ADAM29', 'ARHGEF18', 'DAPK2', 'ITPK1', 'WNT8B', 'PDE11A', 'CCNB3', 'NAB1', 'SLC7A2', 'CBWD2', 'GPR162', 'ZEB1-AS1', 'STAC2', 'SSH2', 'GPRASP2', 'AFP', 'LIN7C', 'HFE2', 'USP4', 'UEVLD', 'HHLA3', 'GSK3B', 'FAF1', 'PPIA', 'ATRAID', 'KLHL30', 'LMOD2', 'TMEM14B', 'SETDB2', 'NLRC3', 'RPL13AP17', 'OR5T2', 'PRORSD1P', 'ARRDC5', 'FNDC4', 'SLC25A2', 'NDRG2', 'ACBD6', 'SCRN3', 'BCYRN1', 'SHROOM4', 'TPRN', 'NID2', 'PRB1', 'NUDT13', 'SNAR-I', 'RAB9A', 'SLC22A18AS', 'ALOX5', 'PAX6', 'ZNF766', 'MFSD5', 'WFDC2', 'DOCK9', 'PIGU', 'PTPN12', 'TRPV1', 'GANC', 'SEMA3G', 'TMEM184A', 'PRR22', 'CXORF40B', 'GP9', 'SUFU', 'CDKN1A', 'VOPP1', 'THPO', 'PABPC1L2B', 'PLXNB1', 'CXADRP2', 'MRPL21', 'GCSAM', 'GDPD5', 'APOA5', 'CRISP1', 'GSDMA', 'OR2M7', 'BEX1', 'C8ORF33', 'INTS4P2', 'ZNF180', 'USP47', 'LPAL2', 'EIF2B5', 'LINC00710', 'CADM2', 'PRLR', 'RTN4R', 'SF3A3', 'C1QTNF6', 'TECR', 'BRDT', 'MSTO2P', 'RNASE8', 'CIC', 'GCM2', 'KRTAP1-5', 'ATAD2B', 'MYSM1', 'MYOC', 'SMCR8', 'CKLF', 'C3ORF52', 'PRSS42', 'POTEC', 'ANKRD30BL', 'PCSK1', 'SMPD3', 'CREBZF', 'FGF14', 'ANKRD26P1', 'RFXAP', 'NEURL4', 'HNF1A', 'WDR1', 'TAF7L', 'CYP1A2', 'ISCA1P1', 'SNX7', 'NPY1R', 'AKR1E2', 'CDC40', 'ANKRD22', 'ITPKA', 'HAUS7', 'TRAK2', 'SNORA14A', 'ARHGAP19', 'RILPL2', 'TSPAN8', 'PCDHA7', 'CMSS1', 'NDUFAF2', 'BCAS1', 'GARS', 'RPL26L1', 'SMARCAD1', 'TSC22D4', 'TCP11', 'MRPL16', 'ZEB1', 'STAG3L3', 'MYT1', 'MYOM3', 'ZNF565', 'RCAN2', 'GNL3', 'PAPOLA', 'NFE2L3P2', 'ABCC5', 'PRPS1L1', 'HILPDA', 'ATR', 'ACVR1', 'BCL2', 'MAML1', 'FAF2', 'ARHGEF39', 'DNM1P46', 'LOC100287704', 'PAK4', 'ANGPT1', 'N4BP3', 'POP1', 'ARHGAP22', 'ECM2', 'SNX8', 'TCTEX1D1', 'DLEU2L', 'PKP4', 'LRRC27', 'RAB6C', 'ASAP3', 'PLLP', 'CBLN3', 'PCM1', 'POLR3D', 'DBF4B', 'DST', 'RHPN1', 'TGM5', 'SNORA80A', 'CUBN', 'KLHL33', 'NGLY1', 'CDH16', 'TCEA2', 'RRN3P2', 'AMDHD2', 'CD5', 'CYP24A1', 'CHD7', 'ZNF791', 'DCANP1', 'SCIMP', 'GALNS', 'ZBTB16', 'PSG7', 'TBC1D24', 'NEFL', 'BARD1', 'OR2W3', 'MCM6', 'SLC16A6', 'BAAT', 'RALB', 'MCTS2P', 'HAO1', 'BTBD18', 'GLRX2', 'PDSS1', 'ADAD2', 'VPRBP', 'RNF207', 'TNNC2', 'FAM212A', 'OR5K2', 'SPANXN4', 'PLD4', 'PPAP2B', 'PRAMEF9', 'NDUFB7', 'TRPC4AP', 'GSG2', 'NUDT7', 'SPCS2P4', 'MFSD10', 'SLC18A3', 'ECHDC1', 'SERPINA5', 'TRIM13', 'PBDC1', 'SLC6A4', 'LYPD8', 'PRKCH', 'ADCY5', 'NBEAP1', 'FDX1', 'DCTN4', 'WBSCR27', 'RARRES2', 'CDC14C', 'NUCKS1', 'ALDH1L1', 'FLJ23867', 'OR4C3', 'MDM4', 'RGL4', 'PPAPDC2', 'MOGAT1', 'ADGRB1', 'PLA2G12A', 'CCDC141', 'DUXA', 'TRIM14', 'ATG16L1', 'OR4A47', 'KCTD2', 'ZP2', 'SLC9A3', 'LINC00482', 'YKT6', 'AQP7P1', 'RRM1', 'DKFZP779M0652', 'TCF20', 'TMUB2', 'GJA4', 'SDPR', 'FAM71F1', 'TNRC18', 'GOLT1B', 'CES4A', 'DMBT1', 'MAFA', 'NEURL3', 'CACNA1C', 'PES1', 'DNAJC18', 'DNASE1', 'SPICE1', 'EMP1', 'TMED7-TICAM2', 'MS4A14', 'HCN2', 'NR1H4', 'PDDC1', 'NDUFA5', 'NOS1AP', 'MIMT1', 'RALY', 'APOF', 'NME6', 'TP73', 'PGGT1B', 'CTSV', 'EPB41L4A-AS1', 'C17ORF62', 'TNNI3', 'ASB10', 'UGT2B10', 'ATXN3L', 'SPINK1', 'SYNDIG1', 'SNORD115-7', 'MBD3L5', 'KARS', 'NT5C2', 'MINA', 'TMEM39B', 'MTG1', 'KIF20B', 'RSPH4A', 'ARID2', 'OSBPL1A', 'UCA1', 'HEATR1', 'MESDC1', 'ZG16', 'OR6P1', 'PSME4', 'ARRB1', 'COLEC10', 'YAF2', 'TIMM10', 'TMEM176B', 'BRMS1', 'RNF8', 'UGT8', 'FLG', 'CHMP4A', 'CHD5', 'SLC37A3', 'TBC1D10B', 'GUCY2GP', 'NBR1', 'MNS1', 'TPM4', 'ITLN2', 'RGS17', 'SEMA6A', 'SERF1A', 'IGSF1', 'GDI2', 'C1QTNF8', 'CD14', 'TAS2R38', 'HOXA4', 'MRPS10', 'ALDH8A1', 'BST2', 'RPL22L1', 'LINC00896', 'FAM83H', 'LOC440173', 'ADAM5', 'TMPRSS11D', 'SYK', 'C5ORF38', 'TP73-AS1', 'SCRT2', 'CNBD1', 'FAM222A', 'ASB11', 'NPRL3', 'FAM96B', 'EP400', 'ZNF121', 'PELI1', 'MYEOV2', 'OGFOD3', 'NUDT3', 'BMPR1A', 'CC2D2B', 'CDK1', 'CNDP1', 'HAS2-AS1', 'HOXB9', 'MFSD1', 'KIAA0087', 'MEFV', 'CLK3', 'OR1G1', 'TBPL1', 'A1BG', 'SLC6A20', 'SLC9A8', 'ZNF696', 'ACTL7B', 'PIGK', 'NEK4', 'EDDM3B', 'E2F5', 'SNHG10', 'CASP2', 'ZMIZ1-AS1', 'DYNC1I2', 'MTHFD2L', 'LINC00938', 'LOC730668', 'DDX11L2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 2.5095212118317504e-15 NRMSE: 3.923885875743492e-16 MAPE: 3.7285486839638166e-12 Pearson Correlation: 0.12076540400788496 Spearman Correlation: 0.09534191786167205 Coefficient of Determination: -4.456755455216099 RMSE: 1.19515267526496 NRMSE: 0.40084272714816205 MAPE: 4960.758056333566 Predictor: ElasticNet Pearson Correlation: 0.8499070315386318 Spearman Correlation: 0.8091176637425115 Coefficient of Determination: 0.6838607361569653 RMSE: 0.3507111018602134 NRMSE: 0.05483716704873949 MAPE: 343.7641685815088 Pearson Correlation: 0.3018377855149005 Spearman Correlation: 0.23812798751341338 Coefficient of Determination: -0.06822575511505002 RMSE: 0.5287953952373603 NRMSE: 0.1773528961756642 MAPE: 1891.9898732484512 Predictor: RandomForests Pearson Correlation: 0.6205940035795464 Spearman Correlation: 0.5529744101923236 Coefficient of Determination: 0.3227493158068675 RMSE: 0.5133162598262329 NRMSE: 0.0802620998868318 MAPE: 239.92657000257424 Pearson Correlation: 0.31626213275119847 Spearman Correlation: 0.3363928021415622 Coefficient of Determination: 0.09613380342858902 RMSE: 0.48641640611554904 NRMSE: 0.163139390299017 MAPE: 502.809476550079 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['ZNF17', 'PITPNM2', 'TPP2', 'WFDC10B', 'WFDC3', 'LIF', 'LYPD3', 'SPACA3', 'CRP', 'PFKP', 'ZNF213', 'RPS9', 'CTNNBIP1', 'SART1', 'DIMT1', 'BAK1', 'CSTA', 'MAGED2', 'UPP1', 'CMTM5', 'GALT', 'RPSAP52', 'ABCC11', 'TRAF7', 'GPR156', 'LOC399815', 'PDZD8', 'FBXO38', 'ACTR3C', 'LINC01020', 'SHROOM4', 'GSPT1', 'DHX37', 'WDR87', 'FBXL12', 'GPR101', 'DNAH12', 'SDHAF1', 'UBR5', 'HOXA13', 'TONSL', 'OR2M2', 'PLEKHG6', 'LINC00950', 'SYCP1', 'DDX19B', 'ADAMTS18', 'SCYL3', 'CMTR2', 'INS-IGF2', 'TGM4', 'HFM1', 'SLC39A3', 'CASKIN1', 'LILRA3', 'TMEM37', 'TEX9', 'TAF4', 'MTUS1', 'ANKDD1A', 'ONECUT2', 'ABCC6P1', 'RPL13P5', 'ASIP', 'OTOP2', 'C2ORF81', 'TMPRSS6', 'PRB1', 'ATG10', 'ZNF700', 'DEFB109P1', 'COL5A3', 'INPP5B', 'DMP1', 'NFKB1', 'BLZF1', 'HIPK3', 'MST1P2', 'ZNF618', 'RGPD1', 'CYLC1', 'CLDN19', 'CRYM', 'TSR1', 'LRRC75B', 'ATG9B', 'SLC43A2', 'BIRC5', 'TMEM173', 'WBP11P1', 'INPP5E', 'CCDC101', 'LRRC8C', 'C1QTNF8', 'RGS14', 'PEA15', 'GGTLC2', 'GPR18', 'FAM160B2', 'SIX2', 'FASTKD2', 'SEMA3F', 'SUV39H2', 'RNF185', 'FOPNL', 'PGLS', 'GATAD2B', 'MANBA', 'DENND2C', 'TNFSF13B', 'RPL7A', 'ZBP1', 'MAGEC1', 'ACMSD', 'LARS', 'ACOT4', 'SDK2', 'OSBP', 'SKIL', 'DBNDD1', 'ARRDC4', 'FLJ23867', 'FGD3', 'RTN3', 'BRSK1', 'GNL1', 'FAM131C', 'LRRN2', 'TRPM7', 'UBAP2L', 'NKX6-3', 'VAPB', 'UGT2A1', 'PDCD6', 'HMBS', 'PSG10P', 'CPNE9', 'APBA3', 'ANXA10', 'RABGGTB', 'KXD1', 'LAIR2', 'NMD3', 'RTP5', 'PGAM4', 'CNTNAP4', 'GSTTP1', 'CREB5', 'NME5', 'KCTD11', 'STAU2', 'S100A6', 'SLC47A1', 'AXIN1', 'LINC00304', 'OR4X2', 'NFE2L3P2', 'NFKB2', 'BAGE', 'CSNK1G3', 'NOL9', 'C3P1', 'CYP3A4', 'KIF21A', 'LEAP2', 'KRT81', 'PRPS1L1', 'PRAMEF2', 'PPARA', 'C1ORF64', 'ITGAL', 'MYLK2', 'PEX26', 'GUCY1B3', 'OXTR', 'ASAP3', 'SORT1', 'MIR7-3HG', 'GDF3', 'DDTL', 'CENPC', 'RNASE13', 'ZBED8', 'ZNF333', 'LY6G6D', 'METAP2', 'SYT5', 'OSBPL10', 'C1QA', 'ZNF492', 'OR12D2', 'PRKY', 'TMCO4', 'CCNA2', 'CAMK1D', 'NINJ1', 'ICAM3', 'BPIFB4', 'NCOA5', 'RNF222', 'PPP1R3A', 'CYSLTR2', 'EPHB6', 'RPS3A', 'STOX1', 'MEN1', 'XPNPEP1', 'PCLO', 'SNHG20', 'NSDHL', 'KRTAP9-4', 'GOLT1B', 'MTHFD2L', 'PTBP1', 'SCX', 'OR1L4', 'PDC', 'NRADDP', 'TMEM45A', 'TMEM105', 'SAMD14', 'ADGRG5', 'TMPRSS11B', 'C11ORF53', 'APOA1', 'RPS2', 'TRAM1', 'LINC00957', 'ELMOD1', 'HMGCS2', 'TLR1', 'TNFRSF17', 'DNAJB9', 'TBXAS1', 'SPON2', 'CBLL1', 'PRDX2', 'C7ORF61', 'TAAR9', 'HSPA7', 'OR4D9', 'MPND', 'SCTR', 'HSD3B2', 'EXOSC3', 'ACHE', 'ZFP42', 'OTUD5', 'COMMD5', 'PTPRK', 'LYRM1', 'UBE2W', 'PPP6R2', 'EGFR', 'TM4SF4', 'DCTPP1', 'MACROD1', 'ZSCAN29', 'SCNN1B', 'PHF1', 'MAML1', 'TMEM220', 'UBE2U', 'LOC100132831', 'C11ORF68', 'NOP14', 'ST6GALNAC6', 'BRINP3', 'MIS18A', 'DROSHA', 'CPE', 'GSS', 'PLCB4', 'TOX3', 'CLEC4M', 'LRP2', 'C10ORF55', 'BCL6', 'MED25', 'RIOK2', 'CNTRL', 'PPIB', 'KRTAP10-10', 'CPOX', 'DNAJB12', 'MYBL2', 'DBNDD2', 'DUXA', 'MAPT-AS1', 'ACTR1B', 'TUBA1C', 'ZNF678', 'MASP1', 'NUP37', 'EDN1', 'AARS2', 'ZBTB34', 'ZNF608', 'HMOX2', 'BREA2', 'C1ORF204', 'FAM84A', 'IGF2BP2-AS1', 'OR1J4', 'C17ORF50', 'SLC20A1', 'C2ORF16', 'EEF1G', 'WFDC10A', 'ST7', 'FAM99A', 'ASPG', 'RBM4B', 'PLCB1', 'SCN4A', 'DDX5', 'MEP1B', 'PCDHGB1', 'AIG1', 'PROM1', 'ZNF211', 'YTHDF1', 'SMARCAL1', 'GRIK5', 'SLC22A17', 'TPCN2', 'GSTK1', 'IRX4', 'LRRC16A', 'SLC16A3', 'KIAA1644', 'FAM157A', 'LSS', 'RBM10', 'IST1', 'MORF4', 'MYH14', 'FZD4', 'UBQLN1', 'HMGB3', 'NRN1L', 'DTX3', 'P2RY1', 'METTL25', 'ZNF556', 'IRF2BPL', 'OR8K3', 'AAGAB', 'ZNF343', 'TMEM254', 'CCT5', 'LMBRD2', 'CDK17', 'SCGB1B2P', 'SUPT16H', 'RPL10L', 'NDUFS2', 'EFHC1', 'FER1L6', 'RPIA', 'HMBOX1', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.8454177342411388 Spearman Correlation: 0.8012851286302665 Coefficient of Determination: 0.7147311453694208 RMSE: 0.10432386488270995 NRMSE: 0.06720815904829117 MAPE: 227.22731135476954 Pearson Correlation: 0.059086495524042895 Spearman Correlation: 0.10750170715052192 Coefficient of Determination: -10.199524657491004 RMSE: 0.6465161680530663 NRMSE: 0.43762474738417706 MAPE: 1518.232992890058 Predictor: ElasticNet Pearson Correlation: 0.52172609920929 Spearman Correlation: 0.48707920288377804 Coefficient of Determination: 0.21566607874225308 RMSE: 0.17298441920885116 NRMSE: 0.11144108179020852 MAPE: 160.72434180627968 Pearson Correlation: 0.19165150131565298 Spearman Correlation: 0.17859233245537026 Coefficient of Determination: 0.021370075611820583 RMSE: 0.19111238870358127 NRMSE: 0.12936337088096855 MAPE: 122.51367388225079 Predictor: RandomForests Pearson Correlation: 0.6091691990433316 Spearman Correlation: 0.5458047976720014 Coefficient of Determination: 0.18678945955459436 RMSE: 0.17613999851084788 NRMSE: 0.11347398841091827 MAPE: 158.77176872221193 Pearson Correlation: 0.18762887097812916 Spearman Correlation: 0.21771534484440544 Coefficient of Determination: 0.019761031079758462 RMSE: 0.1912694358367055 NRMSE: 0.12946967558819322 MAPE: 135.99616990413955 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['PLET1', 'FRAS1', 'LANCL3', 'GIGYF1', 'DGKK', 'MED27', 'RHOU', 'TEX11', 'KIF21A', 'KRTAP5-7', 'CCDC18', 'FAM183CP', 'TRIP12', 'MTUS2', 'CYP46A1', 'ERMP1', 'OR5D13', 'LOC727896', 'GOLT1B', 'GOLGA2', 'RIPPLY3', 'TRIB1', 'CLEC18A', 'LINC01138', 'CA5B', 'MITF', 'DNAAF3', 'SSR2', 'SPATA20', 'CBX7', 'TMC1', 'ALDH5A1', 'CDKN2B-AS1', 'TMED6', 'GNRHR', 'LRTM2', 'APAF1', 'WDR74', 'PEX13', 'ZNF260', 'CCND3', 'PCCB', 'BCL7B', 'RNASET2', 'SNHG11', 'SLC25A32', 'ANKRD20A11P', 'CHD4', 'LINC01558', 'GLIPR1L2', 'DIRC1', 'TRIP6', 'KPNA2', 'RGS14', 'ZFAT-AS1', 'PRIM1', 'MTA3', 'HAS2-AS1', 'PRINS', 'AP5Z1', 'SLAMF6', 'SP1', 'STK24', 'HLA-A', 'PRKACA', 'SCN3A', 'FAM167A', 'HSD17B1', 'FAM21A', 'HTATIP2', 'NBL1', 'SCAMP2', 'GCSAML-AS1', 'ABCB6', 'FAM181B', 'HIST1H2BL', 'KCNC4', 'C7ORF66', 'PREB', 'CYHR1', 'LCK', 'PLEKHN1', 'HMGCS2', 'HYPK', 'ERICH1', 'CA7', 'TMEM104', 'KLC4', 'HAUS6', 'CMTR1', 'WDR63', 'ZNRD1-AS1', 'DDX26B', 'WAPAL', 'CRYBB2', 'WASH2P', 'TSPAN2', 'TSPO2', 'ADAMTSL3', 'EFCAB5', 'GCNT4', 'PIGF', 'HIST1H2BO', 'CTNS', 'PSMD6', 'MAGEB16', 'CCDC74A', 'PSG8', 'SLC19A1', 'JAG1', 'PDZD4', 'CCDC149', 'GTF2E1', 'DHRS11', 'TRAIP', 'JAK3', 'ZNF281', 'GFRA1', 'SCMH1', 'ARMC4', 'CARNS1', 'NOP10', 'PPP1R11', 'CECR5', 'FAM66E', 'ADH7', 'APOE', 'ALS2CR12', 'CSPG4', 'DKFZP434L187', 'CCDC40', 'OR13G1', 'MAPK11', 'EIF3G', 'KCNH4', 'OR11L1', 'FBXL7', 'MND1', 'TSHZ2', 'SPN', 'PPFIA3', 'SEC22B', 'CYP7B1', 'MSRB1', 'SLC9C2', 'AP3D1', 'OR52D1', 'BIN3', 'COL3A1', 'NR0B2', 'FEN1', 'CR1', 'TMEM131', 'TAS1R2', 'PWRN2', 'KLHL41', 'LRRFIP2', 'SLC22A8', 'DICER1-AS1', 'FAM53A', 'KEAP1', 'C20ORF27', 'DEDD', 'SLU7', 'GTF2IRD2B', 'PHKB', 'TMEM88', 'C2ORF72', 'TRIO', 'KDELC1', 'AFF4', 'C4BPA', 'PLRG1', 'TLN2', 'C1QB', 'RNF138P1', 'CYP26B1', 'WIBG', 'BRINP3', 'RPH3A', 'ZNF713', 'VWA5A', 'UGT2B11', 'ABCC12', 'MRPL4', 'MTG2', 'CHST7', 'CENPH', 'ISCA1P1', 'RFNG', 'RANBP6', 'AQP3', 'ZNF501', 'SPAG17', 'ANKRD52', 'ZSCAN25', 'RBM25', 'MYT1', 'NGRN', 'TWSG1', 'VHL', 'PRSS54', 'FAM13A-AS1', 'ATP6V0A1', 'MYLPF', 'GRINA', 'VPREB3', 'FAM180B', 'B3GNT8', 'HDAC9', 'KIAA0226L', 'C6ORF1', 'COBLL1', 'TMEM132A', 'CLDN17', 'PLEKHG1', 'ZNF383', 'FCGR2A', 'HOXD10', 'DNAJC5B', 'XDH', 'VEZT', 'CCDC132', 'AGR2', 'FOXD4L3', 'C22ORF15', 'TPRXL', 'NDUFB6', 'C4ORF27', 'DUSP15', 'TEX29', 'CLK3', 'HABP2', 'LIG1', 'ITSN2', 'RRP7A', 'TBCC', 'HNRNPA1P33', 'FAM96B', 'STON1-GTF2A1L', 'C16ORF13', 'LCAT', 'KLHL12', 'HLA-DOB', 'EP300', 'TRIB3', 'ABCA1', 'SPINK8', 'C15ORF40', 'PCTP', 'HAVCR1', 'STEAP2', 'TRNP1', 'INTS4', 'MTSS1', 'SEC22A', 'SLC23A3', 'MT1E', 'DNTTIP2', 'MAFK', 'HAUS8', 'ERI2', 'APTX', 'AMIGO2', 'HBB', 'CCDC65', 'ARHGAP44', 'FBN3', 'CARD11', 'JSRP1', 'FAM110C', 'GDF2', 'DEPDC5', 'PTGFR', 'DEFB118', 'TMEM132E', 'DENND1B', 'C16ORF82', 'LMBRD1', 'FAM20B', 'SH3GLB2', 'PCSK9', 'SORCS3', 'MDFI', 'CX3CL1', 'KCNU1', 'AREG', 'PRSS58', 'WDFY1', 'ACBD5', 'FOXD4L5', 'CD2AP', 'RBFA', 'SNORA12', 'C9ORF163', 'PSD', 'C3ORF36', 'APOA1BP', 'BCKDHB', 'OR11H6', 'CD209', 'PNLDC1', 'TMEM14B', 'HOOK3', 'HNRNPH1', 'TTC30A', 'GCC1', 'SNORA56', 'GRIN3A', 'RHBDD2', 'LRRC30', 'USP34', 'ANKRD30BP2', 'EIF4A3', 'TRUB1', 'CDCP2', 'IL9', 'FSD2', 'SLC52A2', 'ZNF195', 'LOC145783', 'ZNF821', 'SUOX', 'HADHA', 'SGCG', 'ATP12A', 'LGALS1', 'RPS14', 'CHGB', 'TDRD5', 'CACNA2D2', 'OR5D18', 'RAB4A', 'DHX34', 'LINC00950', 'TRABD2A', 'IKBKE', 'XKR9', 'GSTM2', 'CD320', 'PCAT18', 'SUZ12P1', 'OR2T35', 'TMEM50A', 'RPL23AP7', 'E2F7', 'CASKIN2', 'CYB5D1', 'ST7-OT3', 'KRTAP5-5', 'GNG3', 'GALC', 'EPHB6', 'CAPG', 'RTCA', 'C20ORF24', 'GPHA2', 'ARL14EP', 'LAMTOR3', 'UBE2QL1', 'SCGB1D4', 'ZNF646', 'LINC01550', 'REST', 'FAM182A', 'ADGRF2', 'PLA2G16', 'C21ORF58', 'ITGBL1', 'ZYG11A', 'RSF1', 'CYP4V2', 'FAM86HP', 'TMEM150C', 'RPRD1A', 'CDC27', 'FAM66C', 'IKZF4', 'MGC27382', 'ZNF530', 'SFTPC', 'DNMT1', 'USP17L2', 'ZFP28', 'SMIM7', 'PAN2', 'C19ORF40', 'KIR3DL3', 'FNIP1', 'RAB26', 'FOXI1', 'AIG1', 'HSP90AA1', 'LOC730101', 'IQCA1', 'MAPRE3', 'CYP19A1', 'GBP7', 'CAMKV', 'GPC5', 'ZRANB1', 'CYP2S1', 'AGMO', 'KAT5', 'CDC37L1', 'LHX2', 'NCALD', 'CNGB3', 'KRT38', 'KLHL2', 'RAB25', 'HES4', 'PDE1C', 'RPAP2', 'ZNF692', 'RPA1', 'EFNA4', 'AQP6', 'FAM161A', 'LOC340017', 'BECN1', 'TAS2R4', 'TYMS', 'PCDHB5', 'SLC11A2', 'TDP1', 'PRSS45', 'CDK9', 'ABCB11', 'CYP21A2', 'RAMP3', 'SLC27A4', 'APOC1P1', 'MYO1E', 'WDR90', 'PHLDB3', 'ACRV1', 'MBOAT1', 'TAX1BP1', 'TBC1D26', 'MAGI2', 'BAD', 'CAMK2A', 'PHAX', 'DUSP5', 'IMP3', 'SSTR5', 'LOC100130691', 'COPB2', 'C1QTNF3', 'RBMS2', 'C10ORF105', 'G0S2', 'PPP1R14C', 'FOXO4', 'LAMC3', 'CRYL1', 'GPR32', 'MYO1A', 'KRTCAP3', 'TAGLN2', 'RPS6KA6', 'KRTAP10-1', 'ABCB8', 'KLK1', 'VWC2', 'TMEM214', 'CES4A', 'LOR', 'ARID4B', 'C1QL3', 'LINC01588', 'PRKCI', 'CLDN9', 'RRP1', 'ITGA9', 'ZNF845', 'LRFN4', 'HPS5', 'PLCE1', 'C7ORF60', 'CHCHD4', 'YWHAQ', 'ZNF706', 'CARD6', 'FAM201A', 'TSG1', 'TCEAL1', 'IL23R', 'CNOT3', 'WSCD1', 'MIR99AHG', 'TBL1X', 'C1ORF127', 'SYTL4', 'SSR1', 'C17ORF82', 'SDHC', 'PTRF', 'TMSB15A', 'TEF', 'LINC00479', 'GIMAP2', 'TMEM159', 'TRAM2', 'GNAT1', 'HP', 'FGD4', 'CHST1', 'PMS2P1', 'PRCP', 'AFAP1L1', 'MAST2', 'MSH3', 'ASNA1', 'ZC4H2', 'ENSA', 'PATL1', 'PPWD1', 'DEFB1', 'BRE-AS1', 'ELAVL1', 'SH3RF3', 'SLAMF9', 'NANOG', 'C7ORF57', 'CNIH4', 'LOC391322', 'TCIRG1', 'MAPK4', 'ARGFXP2', 'MAP4K4', 'POM121L8P', 'ACOT11', 'DMRTC1B', 'TAOK1', 'MYPOP', 'AP3M1', 'PLA2G12A', 'LSM1', 'ZNF738', 'ZBTB43', 'HOXD9', 'CIB3', 'ASAP1', 'MMP28', 'GOLGA2P5', 'HMX2', 'KLK8', 'TMEM179B', 'ATP6V1H', 'ARHGAP28', 'CAMSAP1', 'ASPG', 'DPH3', 'LTBR', 'TAF13', 'PRR5L', 'FAM213A', 'RC3H1', 'SOX12', 'ZNF189', 'FBXL5', 'BMS1P5', 'KITLG', 'MIR31HG', 'FAM86EP', 'BRPF3', 'ZDHHC18', 'GMCL1', 'CHN1', 'ANKHD1-EIF4EBP3', 'ACADSB', 'SYT14P1', 'ZBP1', 'CDK12', 'C1QTNF9B-AS1', 'CFHR2', 'DHRS7B', 'ATP5G1', 'PNPLA5', 'B4GALT3', 'KERA', 'CCDC115', 'KRBA1', 'WNT5B', 'SYVN1', 'ATXN3', 'METTL24', 'GTF2I', 'NT5M', 'KIAA1456', 'TBRG4', 'LCE1F', 'UTP14A', 'PEX11B', 'NELFCD', 'PSMA3', 'KIF2A', 'ANO5', 'BRF2', 'TAF1A', 'LINC00442', 'NAA15', 'SLC6A11', 'C2ORF27A', 'PIK3CB', 'SP140', 'SNAR-G1', 'LINS', 'GCHFR', 'FBXO10', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 3.752798265121811e-15 NRMSE: 8.48377589040762e-16 MAPE: 2.9251939125501634e-12 Pearson Correlation: 0.09654222661364817 Spearman Correlation: 0.17119793190908206 Coefficient of Determination: -7.4062780496766365 RMSE: 1.9525215043420276 NRMSE: 0.5274804150480947 MAPE: 1002.0014123710345 Predictor: ElasticNet Pearson Correlation: 0.8512945816426133 Spearman Correlation: 0.8320249234606184 Coefficient of Determination: 0.6957068814836005 RMSE: 0.36591947803948466 NRMSE: 0.08272170861071201 MAPE: 242.2257452848972 Pearson Correlation: 0.5808445584124923 Spearman Correlation: 0.48962540239976593 Coefficient of Determination: 0.3353979340901746 RMSE: 0.5490030962742808 NRMSE: 0.14831507895890447 MAPE: 257.0475969965477 Predictor: RandomForests Pearson Correlation: 0.6668394329933187 Spearman Correlation: 0.6456588749972373 Coefficient of Determination: 0.4283481625171951 RMSE: 0.5015396403030137 NRMSE: 0.11338072573821942 MAPE: 189.00698025852932 Pearson Correlation: 0.6903054099392671 Spearman Correlation: 0.5780638206811203 Coefficient of Determination: 0.44132105307386027 RMSE: 0.5033558301885943 NRMSE: 0.13598331267251845 MAPE: 158.86736982840338 Protein: TP53 x_train_column_count: 1002 x_train columns: ['NR1H3', 'UBA7', 'ZKSCAN3', 'METTL5', 'MMP23A', 'RB1CC1', 'GNAS', 'AMFR', 'APOL4', 'KRTAP10-4', 'SPRR2D', 'HIST3H2A', 'TMEM101', 'LOC155060', 'FHL1', 'LENG9', 'TRIM43', 'OR14J1', 'NPPA', 'CYP26A1', 'OPRM1', 'NEUROG2', 'HDAC4', 'CDRT15', 'PBOV1', 'SNORA24', 'SH3GL3', 'ARAF', 'ICAM2', 'MYOG', 'HSF4', 'GMNN', 'IPPK', 'PCGF6', 'NEMF', 'NACAP1', 'TCP11', 'SMAD3', 'CCBL2', 'GNLY', 'TNFRSF21', 'CCL2', 'COL3A1', 'USP49', 'GNB1', 'DGKH', 'POFUT2', 'SLC10A7', 'SPTBN2', 'OSBPL5', 'NPY', 'ADAMTS12', 'IL21', 'RPS19BP1', 'C6ORF201', 'PAIP2B', 'HDLBP', 'MOAP1', 'SGK223', 'SHISA9', 'TRMT10A', 'MZT1', 'CPT1B', 'LYPD2', 'CFAP43', 'SMUG1', 'RPL22L1', 'ENDOU', 'MCF2L2', 'GPNMB', 'TAS2R7', 'ADAMTSL1', 'MAT1A', 'MYH13', 'TDRD6', 'FAM167B', 'CTSO', 'CIAO1', 'C5ORF45', 'USF2', 'FBXL20', 'ANKRD29', 'ATP6AP1', 'CCDC172', 'RPS6KB1', 'PPP1R2P9', 'POU2F1', 'BTG3', 'CWF19L1', 'HHEX', 'ABCC6P2', 'MTF1', 'SPANXC', 'IL13RA1', 'LELP1', 'PPP1R42', 'SDHAF4', 'ILKAP', 'KATNB1', 'C15ORF27', 'MTERF4', 'FKTN', 'MVB12B', 'TNFAIP3', 'DPM1', 'SFRP2', 'PRRT2', 'RAP1A', 'RHOC', 'FAM153A', 'OCIAD1', 'BACE2', 'LILRA5', 'LRRC59', 'P2RY10', 'MAGED2', 'CSNK1E', 'C11ORF52', 'HSD17B14', 'PLK1', 'RNF212', 'ZNF282', 'CHP2', 'ASB12', 'ZFP37', 'LTK', 'MPP5', 'EML4', 'AWAT1', 'SPAG17', 'RNF170', 'QRFPR', 'TEDDM1', 'SNED1', 'CSMD1', 'USP27X', 'PRKAG2', 'LINC01366', 'KLRB1', 'TTTY8', 'MSLN', 'PLK2', 'OR4K13', 'PCNX', 'CYP51A1', 'POLK', 'OR8K5', 'GFAP', 'LOC728743', 'SPATA21', 'TRAIP', 'DCK', 'GPR143', 'LCOR', 'KCNH3', 'VSX1', 'TNN', 'FSTL3', 'AMELY', 'TTTY10', 'AGBL5', 'TAS2R46', 'TMEM200A', 'EYA4', 'MYO9A', 'MRPS2', 'USP51', 'KRTAP12-1', 'LOC152225', 'PRAC1', 'OCA2', 'RNF217', 'PLET1', 'LRRC23', 'CAP1', 'TP53I11', 'AKT3', 'PECR', 'IL18R1', 'TMEM249', 'ZC3H12B', 'STARD5', 'ICOS', 'TOP2B', 'ATP2B2', 'ACOT1', 'ATP5E', 'SLC22A10', 'SRP14', 'CDH26', 'TMBIM6', 'RPA3', 'CACNG5', 'ARL4C', 'ERCC4', 'UST', 'LOC284788', 'STAG1', 'UCKL1', 'ZMYND11', 'KRTAP9-2', 'PDE6A', 'LOC340017', 'EPB41', 'OR12D2', 'ASB16', 'FDCSP', 'CWC27', 'HAS2-AS1', 'VAPA', 'FN1', 'TRAPPC9', 'LINC00964', 'C17ORF82', 'GOLGA6L10', 'ANKRD1', 'RAB22A', 'MIB2', 'LINC01300', 'SFXN2', 'PIN4', 'NOVA1', 'NPHS1', 'KRTAP12-2', 'RASGRP3', 'GSTA5', 'STK4', 'TRPS1', 'DUSP22', 'DKK4', 'SMIM4', 'MEIS1', 'MT1L', 'NT5C', 'NXPH1', 'CMTM6', 'TPRX1', 'ACAD8', 'CASP6', 'ACTN3', 'TBC1D2B', 'TCEANC', 'TUBA3D', 'TBX15', 'OGFRL1', 'TAX1BP3', 'EOMES', 'MKL1', 'RPL13AP17', 'ACVR1B', 'FAM157A', 'PTPRD', 'DENND4A', 'SLC11A2', 'SLC22A1', 'ZNF343', 'UBR7', 'ADGRE4P', 'NABP1', 'PXMP4', 'PAPD5', 'NFYA', 'PPP3CB', 'TMEM2', 'WNK4', 'ABCC11', 'MTG2', 'JAKMIP1', 'S1PR3', 'MCAM', 'UCP3', 'RND3', 'CIRBP-AS1', 'HNRNPDL', 'TDH', 'NOTCH2NL', 'LRP8', 'PRR5L', 'TTC3', 'NBEAP1', 'ISG15', 'CLN5', 'SLC27A1', 'ITGAM', 'SYCE1L', 'PELI3', 'CTXN2', 'THRSP', 'CXCL3', 'MGAM2', 'MYNN', 'FAM3A', 'LYPLA2P1', 'FBXL8', 'SH3TC2', 'COX10', 'ELOF1', 'NKAIN2', 'DCAF7', 'OR2S2', 'CYSRT1', 'ZNF615', 'RECQL4', 'KIAA1755', 'RNF180', 'RAB29', 'DDIT4L', 'STAT6', 'UTS2R', 'ADCY8', 'TCP11L2', 'HEYL', 'DKK1', 'SPTLC1', 'SPRED2', 'CHRNG', 'RALGPS2', 'MBNL1-AS1', 'TWF2', 'SPTB', 'LAD1', 'WEE1', 'UBE4A', 'ST3GAL6', 'ATP6V1E2', 'IFNLR1', 'CCDC28B', 'EIF3I', 'LOC284578', 'HSPA9', 'PGD', 'SLAMF1', 'IMPG1', 'FN3KRP', 'SMC4', 'MSL3P1', 'CAMK2N2', 'KIAA0040', 'SNORA77', 'DGKG', 'AFM', 'ZFAT-AS1', 'SIGLEC17P', 'HSD3B7', 'AQP12A', 'CSE1L', 'MAFB', 'ZNF121', 'HDAC1', 'RASGEF1B', 'ALK', 'SPINK1', 'ARHGEF7', 'BSG', 'IMPA1', 'SMPD1', 'PPP1R1C', 'RPL27A', 'ADGRF2', 'ADARB1', 'FGF13', 'PKIA', 'GPR141', 'ZSWIM6', 'BCL9', 'ELL2', 'SPATA32', 'AKR7A3', 'BRD8', 'GET4', 'SAMD4A', 'PPP1R18', 'LRRC18', 'ATP10D', 'CEP76', 'CD22', 'FRG2DP', 'MEGF6', 'KRTAP12-4', 'LOC541473', 'VIM', 'SPEM1', 'SEMA4B', 'ETF1', 'RBM26', 'SKP2', 'BLOC1S4', 'CYP4F8', 'ITPR2', 'PMF1', 'ASB3', 'URAHP', 'C12ORF54', 'KRT6A', 'TRPC6', 'FUBP1', 'SCYL2', 'NANOS3', 'HAND2-AS1', 'ACER1', 'GOLGA2P5', 'DNASE1L3', 'TSC1', 'RAG2', 'NAB1', 'KCTD18', 'HMMR', 'ZBTB26', 'PTENP1', 'SPINK9', 'MIR99AHG', 'KLHL3', 'C9', 'RAB8B', 'ZNF430', 'GABRE', 'DPPA3', 'TBC1D15', 'PIRT', 'NPPB', 'NPNT', 'SNRNP70', 'NKAP', 'PRMT7', 'LY96', 'CDC14A', 'TMPO', 'LOC100134868', 'MX1', 'FDXR', 'CUL5', 'HIST1H2AK', 'DRD5', 'SH3BGRL3', 'LY6D', 'RAPGEF2', 'APCS', 'MAPT', 'DUSP7', 'LINGO1', 'OSGEPL1', 'HSPA1B', 'TP73-AS1', 'RHOA', 'DNAJC25', 'TINAGL1', 'DOCK6', 'GGA2', 'EXO5', 'YARS', 'RHBG', 'CEACAM21', 'PHF2', 'ECHDC1', 'GPATCH11', 'HOOK2', 'TRIM7', 'PRRG3', 'TBC1D9B', 'FRS3', 'AGTRAP', 'ACTL9', 'CC2D2A', 'USO1', 'SLC25A31', 'MYOCD', 'SCN1B', 'OCLM', 'YY1AP1', 'PDCD2L', 'NXF1', 'FLJ37201', 'MIR7-3HG', 'RBM10', 'ITGAE', 'APOPT1', 'PREB', 'CBX4', 'P3H2', 'CPED1', 'ZNF43', 'KIAA0430', 'TSGA13', 'CKLF', 'IFI30', 'OLFM3', 'DCSTAMP', 'MGAT5B', 'PIH1D1', 'EDC3', 'ZMAT1', 'TBL1X', 'TEF', 'KIAA1715', 'OR5M1', 'FAM102A', 'CENPQ', 'LINC00092', 'RAI1', 'GABRA1', 'CMPK1', 'KRT9', 'OR6C70', 'ABCA5', 'C8ORF34', 'SGCD', 'TESK1', 'ODF4', 'SLC7A8', 'DAXX', 'ADGRG3', 'MUS81', 'NLGN4X', 'DMRTC2', 'RABL2B', 'SATB2', 'PKD2', 'FHDC1', 'WBSCR16', 'ANKRD20A3', 'LOC344967', 'CLPSL2', 'IGSF1', 'GPD1L', 'HACL1', 'KCNJ5', 'ATP12A', 'UGT2A1', 'PSMG3', 'PGPEP1L', 'QTRT1', 'STUB1', 'PSEN2', 'PHF23', 'CPOX', 'WASF2', 'ING1', 'DDX17', 'LUZP6', 'TMEM106A', 'C21ORF2', 'SMAD6', 'NID2', 'RPS2', 'HEBP1', 'CSF1', 'CD84', 'SLC4A2', 'KATNAL2', 'FMO3', 'CALD1', 'KLK10', 'NDUFB10', 'PIN1P1', 'NLRP12', 'FAM173B', 'USP28', 'HSPA12B', 'TRPM7', 'SAMM50', 'MT2A', 'FOXP1', 'FOLR1', 'GPR135', 'RNASE1', 'RAB2B', 'ZNF143', 'ARSG', 'ZNF490', 'EMILIN1', 'SERPINB8', 'RGS22', 'GOLGA7B', 'KIAA1024', 'XCL1', 'STT3B', 'WDR89', 'POLR3F', 'FAM133A', 'CBX6', 'STAG2', 'DIRAS2', 'LINC00937', 'EXTL3', 'C4ORF46', 'GDF2', 'RNF128', 'TNFRSF8', 'STK38', 'ZNF589', 'C2ORF15', 'COMMD2', 'FAM27C', 'KCNT2', 'BPIFC', 'CDRT4', 'ARL13B', 'BAIAP2-AS1', 'CD19', 'OR52K2', 'B3GALNT1', 'KRTAP10-5', 'CH25H', 'APBA2', 'MCF2L', 'ELL3', 'ZNF35', 'RPS6', 'OR2D2', 'KCTD2', 'PLXND1', 'SCML2', 'HDAC3', 'RAB11FIP3', 'MARS', 'SNORA71E', 'METTL21C', 'TK2', 'LINC01098', 'CCL24', 'APPL2', 'PSMC3', 'AFP', 'ARNT2', 'MIR1-1HG', 'CCDC116', 'KDM4A', 'ASIC4', 'SELT', 'ZBTB45', 'SPG7', 'OR6T1', 'SKA3', 'ZNF485', 'TLX1NB', 'TMEM62', 'LINC00662', 'HOMER2', 'PPIC', 'PRELP', 'C1GALT1C1L', 'DPH5', 'TPTE2P6', 'HIST4H4', 'UNC13B', 'RHOB', 'LSR', 'ARHGAP5', 'TMEM216', 'SLC2A6', 'TAS2R5', 'SLC35A5', 'DEFB136', 'MESP1', 'SECISBP2L', 'TMEM200B', 'ZNF157', 'MRPS15', 'SFTPA1', 'ZNF529', 'GOLGA6C', 'C11ORF70', 'CRTAP', 'SMARCC1', 'THYN1', 'ZP1', 'SFTPA2', 'SLC39A7', 'DCP1A', 'PP7080', 'TMIGD2', 'ZSCAN22', 'CHST13', 'KLF10', 'ISM1', 'RARRES3', 'LAX1', 'ACHE', 'NRAS', 'NR1D2', 'SRPX2', 'GABRA3', 'ADGRA2', 'C1ORF64', 'RGS20', 'CT45A4', 'KLF2', 'RPUSD3', 'CXXC4', 'HSPH1', 'GRIA1', 'SZT2', 'PIKFYVE', 'ELMO1', 'RPS27', 'KCNK18', 'CNOT6', 'F8A1', 'CTU2', 'LIPE', 'SFTPB', 'LINC00596', 'NAA35', 'TMEM9', 'EGFR', 'NUCKS1', 'COLCA1', 'PUS10', 'TMPRSS11D', 'WWOX', 'PAXIP1-AS1', 'C11ORF57', 'ESYT2', 'SPARC', 'ELAVL2', 'METTL9', 'ACAP3', 'RASSF2', 'TRIM24', 'TBP', 'SLC25A40', 'CSF3R', 'CFAP74', 'KRTAP10-12', 'S100A12', 'PELI1', 'ASIC3', 'LINC01588', 'ALX1', 'C21ORF33', 'LINC00162', 'NR3C2', 'MC1R', 'HLA-E', 'ARL6IP6', 'HTR1F', 'TYMS', 'IFT46', 'GPRC6A', 'SERTM1', 'CRIPT', 'MIPEP', 'ASB7', 'LINC01102', 'NEK3', 'FLT3LG', 'PLLP', 'DSCR10', 'KRTAP21-1', 'HGS', 'ETFDH', 'NCBP1', 'OR5AS1', 'PSMA2', 'CECR5-AS1', 'PROKR1', 'NFIA', 'GNGT1', 'DMXL2', 'FAM9A', 'ICA1L', 'LDLRAP1', 'GLYATL3', 'TMEM259', 'PSD', 'DCLRE1B', 'SDHAP2', 'SLC41A3', 'JARID2', 'SLC25A11', 'KIF5A', 'HDX', 'NUAK2', 'EBAG9', 'MESP2', 'SLC15A4', 'XYLT2', 'PKP2', 'ABCD1', 'MR1', 'ST7-OT4', 'BACH2', 'KLHL23', 'LOC644936', 'CD1A', 'PRAME', 'MGAT4C', 'GNA12', 'OSBPL7', 'SMCR8', 'TST', 'SPANXN1', 'FAM167A-AS1', 'MFHAS1', 'HIST1H3J', 'ZNF232', 'CDKN2A-AS1', 'SEC23IP', 'DGKE', 'EPHA1', 'FOLR3', 'GATC', 'ACSF3', 'RPL23', 'FCRL3', 'FBXO42', 'RAD21', 'LOC285074', 'ARHGAP11A', 'C1QTNF4', 'MAGEB2', 'NEUROD2', 'AKR1D1', 'SYT11', 'SOX21', 'TRIM2', 'TPD52L2', 'ASH1L', 'ATIC', 'B3GALNT2', 'HSD17B7P2', 'PIK3CB', 'CYP19A1', 'EME1', 'MOK', 'SLC6A20', 'ZNF443', 'STX6', 'OR10C1', 'UIMC1', 'HPCAL4', 'FZD4', 'ACTC1', 'TRIML1', 'UBASH3B', 'ZYG11B', 'ANP32C', 'CDC34', 'IYD', 'GSTM2', 'SIX6', 'ANKFN1', 'EZH1', 'C11ORF1', 'PKP3', 'SNAR-C4', 'CLPS', 'GUCY1A3', 'ZNF845', 'ARFGEF3', 'NFKB2', 'ZNF71', 'GNAL', 'ARGFX', 'TECTA', 'IKBKB', 'WDR37', 'TCTEX1D4', 'FEZF1', 'FBXO15', 'ZBTB22', 'LRRN3', 'KRTAP2-1', 'OSTM1', 'BNIP2', 'SLC27A6', 'KMT2B', 'ANP32AP1', 'EPYC', 'COL9A2', 'NSMCE4A', 'PIGF', 'HSPD1', 'RGCC', 'PSMA5', 'SOX2', 'MKLN1', 'ZNF264', 'CNTFR-AS1', 'C16ORF58', 'ADGRA3', 'FAM183CP', 'IFRD1', 'TAS2R30', 'JHDM1D-AS1', 'POLE', 'KDELR2', 'ZNF321P', 'MSN', 'DGUOK', 'NIF3L1', 'LVRN', 'IFRD2', 'FAS', 'HIST1H4F', 'IL1R2', 'KLF7', 'CRHBP', 'PLP1', 'ARID3B', 'NIP7', 'TFR2', 'FAM104A', 'LINC00950', 'NSUN7', 'IQCJ', 'B4GALT7', 'GLUD2', 'TBX22', 'FKBP9', 'C9ORF43', 'ZNF138', 'GMIP', 'KLHL15', 'ARAP3', 'JAZF1', 'SALL3', 'SASH3', 'AVPR1B', 'CSRNP1', 'GCSAM', 'POLD4', 'SF3B3', 'ELK3', 'ELAVL4', 'NCSTN', 'UNC5D', 'YIPF6', 'OR51G1', 'CPSF3L', 'RUSC1-AS1', 'C19ORF44', 'CIDEB', 'TMEM160', 'GNG3', 'TGM7', 'SSR3', 'DZIP1', 'RCBTB2', 'SLC26A1', 'PPM1B', 'DERL2', 'PRSS37', 'EXOSC8', 'PRPF38A', 'ELF1', 'SNORD22', 'SNORA5A', 'HSD11B1L', 'NOL8', 'LMBR1L', 'DSG2', 'LYL1', 'PIPSL', 'MACROD2', 'CEP97', 'GAS8', 'TCF7', 'CORO1A', 'PRR16', 'TMX1', 'POLR2M', 'NDUFA13', 'PIP5KL1', 'CD4', 'DNAAF3', 'NUDT6', 'C7ORF73', 'PRR23C', 'H3F3B', 'CCBL1', 'EXOC3L1', 'SETDB2', 'FAM214A', 'OR51F1', 'RHOBTB2', 'SEC23B', 'MAP1LC3B2', 'IL3RA', 'CCL16', 'TFB1M', 'WASF1', 'FAM71F1', 'WDR18', 'PPP1CA', 'B3GAT3', 'CLEC4D', 'CRY2', 'RNLS', 'PCDHA12', 'C17ORF59', 'TEFM', 'ERRFI1', 'ZNF781', 'AJUBA', 'ZNF815P', 'SFMBT1', 'SLC25A6', 'SERP2', 'LOC100192426', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.7686195886544958e-15 NRMSE: 4.737162417716609e-16 MAPE: 2.6465141479120457e-12 Pearson Correlation: 0.2530762374716815 Spearman Correlation: 0.2499170812603649 Coefficient of Determination: -1.3449403235398365 RMSE: 0.6268970360907206 NRMSE: 0.2064538238401846 MAPE: 898.0545289109175 Predictor: ElasticNet Pearson Correlation: 0.8413543070973377 Spearman Correlation: 0.7697946317855692 Coefficient of Determination: 0.6697312447998995 RMSE: 0.2616692443535782 NRMSE: 0.07008684728902591 MAPE: 312.6009854940733 Pearson Correlation: 0.5326726750070613 Spearman Correlation: 0.5105453126524242 Coefficient of Determination: 0.27948176643770073 RMSE: 0.3474983981204663 NRMSE: 0.1144404406785662 MAPE: 509.2833247118244 Predictor: RandomForests Pearson Correlation: 0.6698127395480186 Spearman Correlation: 0.5685146509834315 Coefficient of Determination: 0.3888227128758215 RMSE: 0.35596109877130494 NRMSE: 0.09534246652505825 MAPE: 356.58958364441105 Pearson Correlation: 0.5850854987895109 Spearman Correlation: 0.42131268482324413 Coefficient of Determination: 0.3104572009416754 RMSE: 0.3399467807845275 NRMSE: 0.11195349276618721 MAPE: 1583.576569082486 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['SMPDL3B', 'INHBC', 'LIPK', 'TOMM70A', 'GAB3', 'CGNL1', 'ARGFXP2', 'CMTM6', 'TFB2M', 'SPINK13', 'KCNJ1', 'GEM', 'TMEM39B', 'ZNF24', 'ERBB4', 'PZP', 'OLMALINC', 'THBS4', 'PNO1', 'FBXL13', 'MGC16275', 'TSGA10IP', 'EFCAB1', 'EIF2B1', 'DDX31', 'ANTXR1', 'TBX5', 'DLC1', 'STXBP1', 'ATP5G2', 'TCEANC2', 'POLA1', 'PDXDC2P', 'ZFHX4-AS1', 'USP37', 'FKBP2', 'CSNK1G2', 'PRSS3P2', 'DGKI', 'FOLR1', 'TMEM57', 'VENTX', 'USP25', 'SRRD', 'PRDM13', 'EPHB4', 'SPOCK1', 'SGCB', 'ZIM2', 'SLC39A11', 'ZNF224', 'INSRR', 'CARNS1', 'CHD6', 'EPS15', 'LAPTM5', 'XRCC6P5', 'CCNYL1', 'FAM43A', 'PQLC2L', 'DOHH', 'CCT6B', 'TRIM22', 'PLCB3', 'GLYR1', 'SMEK3P', 'MCCC1', 'SFSWAP', 'FGFR1', 'SLC20A1', 'LRRC39', 'PCDH9', 'KBTBD7', 'QSER1', 'ZSCAN20', 'DEFB126', 'ATG3', 'FAM76B', 'THAP2', 'OR52N1', 'MTR', 'SDC1', 'SLC7A8', 'SSMEM1', 'NR5A1', 'UBXN2A', 'KCNIP1', 'ATP8B1', 'PMVK', 'TXNL4B', 'ZDHHC4', 'HOXA4', 'SMAD6', 'CTSC', 'GPR75', 'MTERF3', 'TVP23A', 'ASH2L', 'WNT10B', 'GAS7', 'C18ORF42', 'GPR137C', 'QTRTD1', 'LOC728392', 'GORASP1', 'SOGA3', 'SCYL3', 'RCE1', 'EFEMP2', 'WEE2-AS1', 'ALG5', 'MRC1', 'POLE', 'USP39', 'MS4A8', 'RAB3D', 'BNIP3L', 'SUPT5H', 'PNMAL2', 'CAD', 'ANKRD45', 'PCAT18', 'FOXN4', 'NCDN', 'PMCH', 'C8B', 'TM9SF4', 'NAP1L6', 'NR5A2', 'CEP112', 'ADCK5', 'MND1', 'C9ORF129', 'TMPRSS9', 'OR1M1', 'MOB3B', 'C3ORF67', 'ZNF449', 'GBP7', 'LRR1', 'DYM', 'FBXO43', 'HSD17B10', 'REV3L', 'ZNF256', 'WNK1', 'IQGAP2', 'EGFL7', 'OR9Q1', 'C20ORF195', 'SFRP5', 'AP4S1', 'ZNF322P1', 'KRTAP21-1', 'RBM14', 'PAH', 'SELENBP1', 'PARD6G-AS1', 'CRISP2', 'GOLGA6B', 'CUEDC2', 'CTBP2', 'INSC', 'COMMD5', 'FAM185A', 'CAPN11', 'MRPS16', 'NEUROG3', 'HLA-DOB', 'ARID4A', 'PSMD12', 'ERF', 'LRRC15', 'DEGS2', 'CDK1', 'HJURP', 'CYBA', 'CYTL1', 'ABCC8', 'TMED6', 'WDR55', 'CCDC110', 'TPSAB1', 'KCTD11', 'PLCXD3', 'OR10S1', 'CHRNB3', 'LEFTY2', 'TNFRSF10B', 'LZTFL1', 'MFSD2B', 'FAM58A', 'ZNF853', 'MAP3K14-AS1', 'PI4KAP1', 'NUP155', 'TIMM22', 'TAS2R30', 'TMF1', 'MCEE', 'PRMT1', 'PRG3', 'ZNF493', 'WLS', 'PRR18', 'ASB12', 'MYL6', 'FAM71E2', 'SMC1A', 'VGF', 'JAKMIP3', 'ZSCAN26', 'TRMT44', 'PHPT1', 'GFRAL', 'TMEM181', 'C14ORF93', 'CAMKMT', 'ABT1', 'KCNRG', 'SYNJ2', 'KRTCAP2', 'LOH12CR1', 'AAED1', 'ATP5C1', 'HABP2', 'LMNTD2', 'RNF186', 'MYO1E', 'MBD5', 'LINC00922', 'SNRNP35', 'CD160', 'RPLP1', 'EFNB2', 'OSMR', 'TRIM29', 'NELFB', 'PRSS12', 'PTCHD3', 'LEO1', 'C22ORF34', 'SERPINB1', 'NAV2', 'FXR2', 'ATM', 'PROSER2', 'LHCGR', 'PALMD', 'TRIM60', 'ARHGDIB', 'STARD6', 'KRTAP10-6', 'IFT43', 'POLR3K', 'MAP3K15', 'LINC00189', 'NUDT1', 'NSUN5', 'CLEC1B', 'NAGLU', 'FAM149A', 'IGIP', 'PDLIM3', 'MAPKAPK3', 'C4ORF45', 'L1CAM', 'HIST1H2AA', 'HIST1H1C', 'C9ORF114', 'CAMKK1', 'MEF2BNB-MEF2B', 'VENTXP7', 'NDUFB4', 'IL12A', 'SAMD1', 'KATNAL2', 'GCLC', 'LINC00294', 'ING3', 'G6PC3', 'CFI', 'DHRS7', 'TRIM75P', 'CDH11', 'RELT', 'LOC285847', 'MMP28', 'RPL13P5', 'TOMM7', 'CCNY', 'HAND1', 'CELP', 'RNASE13', 'AMN1', 'KDR', 'CTPS1', 'CPA5', 'MED10', 'MLIP', 'TRABD2A', 'NOP16', 'IVNS1ABP', 'EIF4G3', 'INAFM1', 'NINL', 'RPS3', 'NUTM2A-AS1', 'RABAC1', 'EMX1', 'KLK4', 'KCNG3', 'IFNW1', 'PART1', 'GABRE', 'ADGRD1', 'GGA1', 'SLC26A1', 'MOV10', 'SPTBN4', 'TMEM127', 'SNORA44', 'RNF145', 'TMEM169', 'CT47B1', 'B2M', 'NEK3', 'PAAF1', 'SMG1P3', 'AGRP', 'ZNF561', 'IKBKB', 'C19ORF33', 'CCDC66', 'DDX24', 'ANKRD44', 'F2RL3', 'DMXL1', 'MDN1', 'LOC553137', 'VPS41', 'CEACAM22P', 'AARSD1', 'PRKCDBP', 'DNAJC17', 'AHNAK2', 'KIAA2013', 'ZNF345', 'HHIPL2', 'ITGB1BP1', 'BAIAP2-AS1', 'USP33', 'SEC24C', 'HDAC8', 'OR7G2', 'KCNIP2', 'CRAT', 'SLC2A4RG', 'TMEM140', 'ANKEF1', 'SNX10', 'SLC2A5', 'KIF3B', 'KCNK9', 'CCDC67', 'ALDH1A2', 'RETN', 'RAB2B', 'AGBL3', 'SDR39U1', 'CEP57', 'A2M-AS1', 'BUD13', 'SOX2-OT', 'WFDC9', 'MAML1', 'NTRK1', 'CACHD1', 'ARPC3', 'ZNF429', 'ZNF841', 'TPK1', 'FNDC3A', 'CDH10', 'PNLIPRP2', 'AQP8', 'PROSER1', 'SWI5', 'SLC38A3', 'TWF2', 'GOLGA2P5', 'ABCA13', 'WDFY2', 'FAM71E1', 'ANO8', 'ATP5G1', 'NDUFB1', 'UNC5C', 'MAGI1', 'LINC00602', 'FAM90A7P', 'SLC25A2', 'SAMM50', 'TMEM248', 'TBC1D16', 'HS6ST3', 'MCMBP', 'LILRA6', 'SHISA6', 'LAMTOR3', 'CIPC', 'COPE', 'ARID2', 'TUBA3E', 'KLHL35', 'ASB17', 'SLC45A3', 'ZNF699', 'ARHGEF25', 'CSTF2T', 'ZNF138', 'PTDSS2', 'ZNF101', 'C22ORF15', 'GPR171', 'SEPT2', 'ADAL', 'CCDC169', 'MTVR2', 'LRP12', 'NELL1', 'PARG', 'BRDT', 'SNAPC5', 'PAFAH1B3', 'LRRC32', 'SPANXN1', 'CHST3', 'MARCH5', 'DUSP7', 'CLDN7', 'ATP5L', 'PAX2', 'KRTAP10-9', 'RAD51D', 'SLTM', 'B4GALT6', 'PRAF2', 'GRXCR2', 'ANKRD55', 'FICD', 'VAMP3', 'PRKAR2A', 'PFAS', 'HLA-DRB5', 'PIR', 'ZNF426', 'EPN1', 'WNT7A', 'LY6G6E', 'FEZF2', 'USP3', 'SHROOM2', 'MRPL42', 'NEUROD1', 'CYP4F2', 'OR6C75', 'ZMAT4', 'CCDC171', 'LBX2-AS1', 'BCL2L2', 'KCNN1', 'THAP5', 'DIAPH2', 'PLTP', 'LINC01144', 'KLHDC9', 'PNMAL1', 'AMMECR1L', 'SEPT4', 'PCDH20', 'CBLN4', 'ICMT', 'AGAP3', 'KRTAP27-1', 'TMEM42', 'OR4F17', 'HLA-DQA1', 'TH', 'DCAF11', 'SPHK2', 'CXADRP3', 'FOXO1', 'CELA1', 'SNORA70B', 'MED7', 'SERPINB5', 'ADAMTSL3', 'CGB2', 'CNST', 'HSF2', 'CAPSL', 'C19ORF66', 'TMEM138', 'ANKRD33', 'USP5', 'ABCA2', 'TIMM10', 'EMC8', 'MARCKS', 'SRXN1', 'INPPL1', 'MBLAC1', 'LAS1L', 'SNX2', 'TDH', 'SBNO1', 'RNF13', 'TEX29', 'TTLL5', 'GMPR', 'DHDDS', 'ARHGAP9', 'BAGE2', 'PYROXD1', 'PIGC', 'MPLKIP', 'CECR1', 'C17ORF75', 'ISLR', 'NOMO3', 'S1PR2', 'COG5', 'CNIH2', 'SETD8', 'NR4A1', 'P2RY12', 'PAK2', 'CT47A11', 'PRPS1L1', 'PHLPP2', 'DMGDH', 'HBG2', 'LGI4', 'OR10T2', 'CD1B', 'TAC3', 'SNORA20', 'TRAP1', 'ZBTB41', 'GPD2', 'RRN3P3', 'PTPRK', 'COPA', 'FOXD4L3', 'RAB4A', 'ANKRD34A', 'ADGRG2', 'ZNF346', 'TYW3', 'APOA1', 'ZMYND19', 'TFAP2A', 'NCF4', 'HIST2H2AB', 'TMEM254', 'HAUS4', 'MLYCD', 'TNFRSF1A', 'SMG5', 'MKRN2', 'OVGP1', 'FDCSP', 'POLR2J4', 'MGME1', 'HDAC6', 'HTR4', 'FAM195A', 'SIKE1', 'KRTDAP', 'RAB37', 'UGGT1', 'AOC3', 'ECI2', 'TRIM44', 'CEP170B', 'ITIH6', 'ADRA2A', 'LOC389033', 'EDNRA', 'HNRNPL', 'EI24', 'EMC6', 'NCOA5', 'NAA40', 'PERM1', 'VWA5B2', 'RBP7', 'DENND6B', 'MYL9', 'DXO', 'NOG', 'ZCRB1', 'TLK2', 'LYSMD3', 'MCHR2', 'ENOSF1', 'TPGS1', 'HSD52', 'ANP32A', 'TNFAIP6', 'HIC1', 'KIFC1', 'MS4A5', 'MAOA', 'HHATL', 'OSBPL6', 'SEC11C', 'TBL1XR1', 'POM121L12', 'ARID3A', 'ECHS1', 'FAM90A1', 'ARHGAP32', 'C6ORF106', 'TMEM200B', 'TRIM66', 'PDCD2L', 'NFASC', 'INO80B', 'FAM71B', 'MAP2K1', 'DSPP', 'KLHDC7A', 'SNORA24', 'UBQLN4', 'OTUB1', 'DUS1L', 'LHFPL2', 'SLC7A5', 'STX3', 'RAB3IL1', 'ATG10', 'SEC61A1', 'SLCO4C1', 'ERO1LB', 'RARG', 'KLHL7', 'ZNF252P-AS1', 'MAGT1', 'JAG2', 'HTRA2', 'LYN', 'PCNA', 'COA5', 'RAD18', 'LOC286359', 'PSIP1', 'HCG11', 'NDUFB2-AS1', 'GYPE', 'MFI2', 'CKAP2L', 'SLC7A13', 'NDUFS3', 'WFDC2', 'MFSD7', 'SLC9C1', 'KLHL28', 'ZNF792', 'CXCL9', 'FDX1L', 'PDHA2', 'NR1I3', 'TM9SF3', 'BAD', 'FAS', 'KLHL34', 'TAB2', 'SH3GL3', 'SLC25A3P1', 'CFAP57', 'ZNF572', 'WBSCR22', 'CROT', 'CYP2C9', 'PPP2R1B', 'PJA2', 'LINC00705', 'NUTM2A', 'OXGR1', 'PCDHB10', 'NUMB', 'PLCG2', 'ABCB5', 'NEUROG2', 'TINF2', 'DPY19L2P1', 'SLC35G3', 'HTR3A', 'CLIP4', 'RGS16', 'GDPGP1', 'ZSCAN16', 'LOC400043', 'APRT', 'ADAD2', 'C20ORF85', 'PVT1', 'CSTF2', 'FGR', 'EBF1', 'BET1P1', 'ZNF826P', 'OR51V1', 'GIMAP1', 'UNC119B', 'METRNL', 'SMARCA2', 'USP28', 'RNF44', 'B4GALT1', 'GMFB', 'RDH16', 'SLC5A6', 'DPCD', 'MICU2', 'TRAF3IP3', 'MYBL2', 'TMCO3', 'TCF20', 'KCNK15', 'SYT8', 'RASA4CP', 'CRYZL1', 'ATP8B4', 'AIDA', 'STRN', 'HGS', 'ADGRB1', 'MUC7', 'TERC', 'NKX1-2', 'CKMT2', 'KIAA1804', 'PMS2', 'MADD', 'HSD17B3', 'SLC25A15', 'H2AFX', 'DGCR5', 'DHRSX', 'TMEM14E', 'XYLT1', 'CCNO', 'MEF2C', 'TMEM216', 'SAC3D1', 'CLPSL2', 'PTPDC1', 'NF1P2', 'FOXA3', 'MEF2A', 'CHCHD7', 'NPDC1', 'LINGO3', 'POLD2', 'LGI2', 'OMP', 'KCNB1', 'RBM10', 'BBX', 'OR2A9P', 'SLC25A3', 'SUMO2', 'AR', 'GMPS', 'FGA', 'COL18A1', 'OGFOD1', 'ACSL6', 'SNORA80A', 'ZSWIM4', 'SLC19A1', 'FBXL5', 'SIGLEC15', 'TBC1D8', 'AASDH', 'SSBP2', 'FOXQ1', 'NUBP2', 'SLC22A18', 'GLRX', 'ZNF500', 'CCDC127', 'SPATA45', 'IGSF22', 'CCDC120', 'ST3GAL4', 'DHRS12', 'LOC100287704', 'LLGL2', 'ZDBF2', 'RNF7', 'CLSTN2', 'ATL2', 'PDZD4', 'PBDC1', 'ZNF805', 'CNGB1', 'TMEM200C', 'CYP27B1', 'CINP', 'INO80C', 'SNTB2', 'PORCN', 'OR8B12', 'LOC641367', 'TISP43', 'SNORA15', 'DMP1', 'CASC2', 'DSCR4', 'MARVELD2', 'R3HDM4', 'LOC100130417', 'ZBTB5', 'GPRC5B', 'IFNGR2', 'B3GALT5-AS1', 'KRT31', 'C2ORF81', 'CLCC1', 'ADAM3A', 'CTSL', 'MOGAT3', 'ALPP', 'CNTN6', 'TMEM190', 'LINC00235', 'SNAR-A13', 'CREG1', 'QDPR', 'MRPL32', 'USP6NL', 'MARC2', 'UGT1A1', 'ZFY', 'ARHGAP15', 'PARP10', 'TSHZ1', 'TMEM41B', 'C1RL', 'C9ORF135', 'BST1', 'DEK', 'CDCA3', 'SNX1', 'N4BP2', 'KCNMB1', 'FGF7', 'ZNF707', 'FAM122A', 'FERMT2', 'ZNF286B', 'C12ORF77', 'USP24', 'ELAVL3', 'MCRS1', 'CCDC54', 'MRPL15', 'CCND3', 'SNURF', 'NDUFV3', 'RADIL', 'HYPM', 'NSFL1C', 'STK36', 'OR5L2', 'RAB40AL', 'FUCA1', 'SRP19', 'KIAA0040', 'FCRL1', 'SLC31A1', 'PLP2', 'SP5', 'DEFB128', 'USF1', 'POLR2K', 'RPL39', 'IP6K1', 'P3H1', 'BRAP', 'SLC9A7', 'KNSTRN', 'FAM110B', 'GFM2', 'NXF4', 'LOC143188', 'PCDHA5', 'FIBCD1', 'GLUD2', 'NFAT5', 'SNORD8', 'TMEM37', 'PAIP1', 'C10ORF11', 'GOT2', 'MORC1', 'ARL13A', 'TMEM63B', 'MRPL37', 'LIPI', 'SLC25A53', 'C2CD4D', 'NRM', 'KBTBD13', 'AKR7A2', 'RTN3', 'RPP38', 'AIM1L', 'CHRNB4', 'COLEC10', 'CHIC2', 'FBXO15', 'ACP5', 'CHADL', 'JAG1', 'SERPINA7', 'IWS1', 'HDDC3', 'POLR2H', 'RABGGTA', 'PIK3CB', 'LINC00483', 'AZGP1', 'NOL8', 'MCOLN3', 'CALCB', 'OR5A1', 'IL22RA1', 'BPI', 'TMEM120A', 'ZMYND10', 'RHOV', 'FMNL1', 'FLJ36777', 'OR2V2', 'HMSD', 'OR6C76', 'SIAH2', 'GGT6', 'CCSER1', 'FKBP1B', 'TSIX', 'STXBP5L', 'PWARSN', 'IRAK1BP1', 'YME1L1', 'PLA2G16', 'ASNSD1', 'COMT', 'RIPK4', 'GALP', 'NANOG', 'PPP2CB', 'TTC36', 'SYNPO2L', 'TCEAL3', 'SNORA61', 'HNMT', 'SERPINA10', 'RPL39L', 'SPTBN2', 'NINJ1', 'C12ORF60', 'ACAD8', 'KBTBD12', 'CENPK', 'CYP2S1', 'TRAPPC13', 'PLB1', 'GBP1P1', 'TRPV1', 'GPN3', 'PAPD4', 'EPB41L4B', 'CCT8', 'TCF7', 'PARD3B', 'TAS2R16', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 3.02788054124812e-15 NRMSE: 5.955705234555704e-16 MAPE: 2.2345544172486885e-12 Pearson Correlation: 0.2941658485101245 Spearman Correlation: 0.2960881865183885 Coefficient of Determination: -0.9846251287397785 RMSE: 1.0798682652166212 NRMSE: 0.26875096817317173 MAPE: 535.942720000519 Predictor: ElasticNet Pearson Correlation: 0.8731129599885732 Spearman Correlation: 0.8609105501817612 Coefficient of Determination: 0.7211062002445967 RMSE: 0.38286670806083933 NRMSE: 0.07530816444941765 MAPE: 159.85416810611795 Pearson Correlation: 0.34494392216848657 Spearman Correlation: 0.38946444249341533 Coefficient of Determination: -0.031290976084672684 RMSE: 0.778434623336187 NRMSE: 0.19373201845055799 MAPE: 350.2311199960898 Predictor: RandomForests Pearson Correlation: 0.5814586853807245 Spearman Correlation: 0.5776558501475535 Coefficient of Determination: 0.27230570763465123 RMSE: 0.6184472444181461 NRMSE: 0.12164579945282183 MAPE: 519.0173939336826 Pearson Correlation: 0.39185836306146726 Spearman Correlation: 0.46761291581309145 Coefficient of Determination: 0.05520315135226539 RMSE: 0.745076307342746 NRMSE: 0.18543000605827284 MAPE: 278.81078684536607 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['IFT74', 'GBA', 'ZNF679', 'HNRNPH1', 'KCNMB1', 'KEL', 'OR56A1', 'CCDC43', 'C6ORF201', 'LBX1', 'CECR7', 'GABPA', 'SNHG6', 'EFCAB14', 'BHLHE41', 'BAG2', 'BUD13', 'SPAG8', 'ZNF335', 'TMEM207', 'F2', 'C5ORF15', 'MXRA5', 'MRPL57', 'PCBP3', 'GLMP', 'ADAM6', 'TMPRSS3', 'HEPHL1', 'DIP2B', 'OR10H5', 'DBNDD2', 'SNX25', 'GALNT12', 'C8ORF22', 'EMP1', 'FAN1', 'NAGS', 'NR1I2', 'GPR82', 'FASTKD3', 'VNN1', 'SEC61A2', 'COX8A', 'MAP1A', 'METTL9', 'SSH1', 'FAM72B', 'ATP5E', 'GKN2', 'OR4F21', 'NSUN2', 'IL18RAP', 'GJA8', 'HSPA1B', 'COX4I2', 'LRRC30', 'OR4A15', 'NKX3-1', 'PLXNB2', 'PTS', 'HYAL1', 'GPR153', 'CEP295', 'SNHG3', 'RC3H1', 'RCN2', 'TSHR', 'RRP8', 'CPT1B', 'QPRT', 'ZBTB11-AS1', 'DPPA4', 'ASL', 'PCBD2', 'GCNT3', 'BMP2', 'ANKRD29', 'FAM179B', 'PPP1R8', 'DYNLL2', 'HIST3H3', 'FAM228A', 'NUDT13', 'IGF2-AS', 'CFAP20', 'TRIM37', 'TIGD7', 'IAH1', 'WDR25', 'PTTG2', 'FAM157A', 'GFRAL', 'LOC283332', 'NOX1', 'HIST1H1B', 'NFIA', 'EVI2A', 'CNNM4', 'OTUD7A', 'KCNH8', 'TAPT1', 'C11ORF53', 'TBX21', 'KIF2A', 'GALR2', 'NRSN1', 'C1ORF159', 'TMC8', 'OVCA2', 'ZNF860', 'PDCL3P4', 'NOM1', 'ATP6V1G2', 'USP6NL', 'TPP1', 'TRAPPC6A', 'NDP', 'LINC00934', 'SLC7A5', 'PDP1', 'SERPINI1', 'WSCD1', 'ACADVL', 'RUNDC1', 'HMHB1', 'G0S2', 'LOC340357', 'ARL5A', 'FREM2', 'SHARPIN', 'OIP5-AS1', 'CEP95', 'LMNA', 'FRYL', 'METRNL', 'OR2W1', 'PADI4', 'ACYP2', 'FAM149B1', 'SEC24D', 'HKR1', 'SLC11A2', 'HABP2', 'CPEB4', 'ATP9B', 'TWIST1', 'IL7R', 'MTIF2', 'IFITM4P', 'KLHDC2', 'GNAS', 'CNNM1', 'HGS', 'GYS1', 'TFE3', 'ZNF568', 'BDH2', 'BMP8B', 'GPR31', 'SUMF2', 'TECPR2', 'GPX2', 'NSUN5P1', 'NXT2', 'NTRK2', 'LRRC20', 'PEBP4', 'COL1A2', 'RAB33B', 'DHX9', 'ANAPC7', 'GPRC5B', 'LINC00029', 'SNX4', 'TK1', 'LINC00152', 'ZNF7', 'RPL6', 'RPL13AP3', 'PDE6G', 'PCBP2', 'FLJ13224', 'ARHGAP19', 'FAM8A1', 'FOXN2', 'HSD3B7', 'KBTBD8', 'ZFP41', 'CCDC88C', 'SLC8A3', 'COX19', 'OLFM2', 'GNPDA1', 'ATP10D', 'C1QC', 'THBS3', 'LOC441454', 'TULP1', 'LINC00887', 'STAB1', 'B3GNT8', 'MFNG', 'FAM155A', 'ZBTB48', 'AK9', 'WDPCP', 'RBM12B-AS1', 'SNRNP25', 'CCDC106', 'PTGER1', 'ZNF813', 'INPP1', 'INAFM1', 'CCR9', 'DBT', 'GATA3', 'HIST1H1C', 'PPP6R2', 'CPN2', 'LOH12CR1', 'SLC39A1', 'TDRD10', 'C15ORF62', 'AP1S2', 'GAB4', 'ZNF346', 'SLC41A1', 'NCAPD3', 'RPS26P11', 'LOC644936', 'MAPRE3', 'LSM11', 'WRB', 'PSMD11', 'CYP4F12', 'FAM122C', 'ATP7B', 'PRSS35', 'ZSCAN21', 'MILR1', 'ELOVL2', 'TNFSF13', 'LKAAEAR1', 'KRTAP5-7', 'SUPT20HL2', 'INTS10', 'KLF4', 'PER1', 'DNAJC14', 'FAM86C2P', 'SGMS2', 'PCCB', 'IVD', 'IK', 'EPS8', 'A2M', 'CHRNA4', 'ARHGAP10', 'TCP1', 'PPARGC1B', 'DEFB109P1B', 'SMCO2', 'PPIP5K1', 'ALCAM', 'DNAJC18', 'FBXO34', 'LIN7B', 'GLTSCR1', 'KLC2', 'JAG2', 'RPP25L', 'NUP160', 'C19ORF18', 'NACC1', 'ZNF844', 'TMEM218', 'DEFB104A', 'ZFP37', 'SRSF2', 'CALCOCO2', 'PARL', 'IL6ST', 'CBX5', 'CSNK1G1', 'SYT8', 'ACAA2', 'AP1M2', 'PIR', 'SPEF1', 'TSPAN8', 'GPX6', 'MAGEE1', 'PSMB2', 'CRHR1', 'SSX5', 'AGAP6', 'PXT1', 'CEBPA', 'ARMC6', 'CASQ1', 'RIPK1', 'TMC6', 'FAAH', 'ACBD5', 'OPRL1', 'STAG2', 'KRTAP10-6', 'TMEM136', 'PPIL3', 'GATAD2B', 'SLC9A6', 'DEPDC1', 'LINC00999', 'BPGM', 'GANC', 'MADCAM1', 'TMEM132C', 'SMG1P2', 'GOLGA6L9', 'C9ORF47', 'LMO2', 'CLDN18', 'TIPIN', 'TRMT10A', 'WDR62', 'YJEFN3', 'TRIP6', 'CD63', 'TRIM34', 'DLG1', 'SLC25A30', 'FAM110C', 'UBR4', 'ZDHHC7', 'TEX33', 'TMEM74', 'NR5A1', 'ATP4B', 'IGDCC3', 'OR6B2', 'TCEA2', 'KLHDC7B', 'LINC00094', 'C9ORF78', 'PPIE', 'SCGB1B2P', 'PTCHD4', 'CNIH3', 'OR6Y1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.9540161813208184 Spearman Correlation: 0.8664166718538238 Coefficient of Determination: 0.9101468723966573 RMSE: 0.15371348789130249 NRMSE: 0.03709570863993592 MAPE: 37.932172807467516 Pearson Correlation: 0.26179975598116645 Spearman Correlation: 0.33287971905179986 Coefficient of Determination: -3.04771782003711 RMSE: 0.8415216299478253 NRMSE: 0.4573511975325004 MAPE: 111.25592180125822 Predictor: ElasticNet Pearson Correlation: 0.8797315587888561 Spearman Correlation: 0.7400455551527881 Coefficient of Determination: 0.7665466485575241 RMSE: 0.24776812505735152 NRMSE: 0.059793934178958785 MAPE: 61.45020172749561 Pearson Correlation: 0.7658564103071827 Spearman Correlation: 0.6502828992293436 Coefficient of Determination: 0.5757230730355349 RMSE: 0.272448785453105 NRMSE: 0.1480707968266703 MAPE: 48.29438883142445 Predictor: RandomForests Pearson Correlation: 0.8591079656263407 Spearman Correlation: 0.7114130041300027 Coefficient of Determination: 0.7332525594969769 RMSE: 0.26484727470245745 NRMSE: 0.06391564898579952 MAPE: 67.97712691917577 Pearson Correlation: 0.8361515922180114 Spearman Correlation: 0.7364104591959587 Coefficient of Determination: 0.6963114175751091 RMSE: 0.23050184241535362 NRMSE: 0.12527342127693827 MAPE: 40.5460064840118 Protein: CCND1 x_train_column_count: 859 x_train columns: ['SIRT6', 'HEATR3', 'FOXO3B', 'CBR1', 'LRIG2', 'SHQ1', 'DERL3', 'PVR', 'SPZ1', 'NUDT2', 'FAF2', 'KIN', 'FGF1', 'DYM', 'PIP5KL1', 'CDCA8', 'TRABD', 'LOC100190986', 'SPATA20', 'SNORA32', 'SNORA66', 'RMRP', 'POLD1', 'PIH1D1', 'ASAP2', 'ZNF549', 'MFSD2B', 'TIGD7', 'DMXL2', 'SH3PXD2A', 'OR7A10', 'PRAMEF11', 'RPS29', 'CLUL1', 'APP', 'WFIKKN2', 'PMM1', 'PODXL2', 'CRNKL1', 'KCMF1', 'TAF1C', 'HDDC2', 'TRIM77', 'BIRC8', 'HIST1H3G', 'PDE1C', 'CCR3', 'GRIP2', 'PCNAP1', 'ZSCAN30', 'FCRLA', 'SEZ6L2', 'XPO5', 'TANK', 'L3MBTL2', 'SPP2', 'GOLPH3L', 'CCNL1', 'QRICH2', 'PCNXL3', 'SEC23IP', 'TOPORS', 'RPL38', 'INPP5A', 'FBXO5', 'HAUS6', 'ZNF446', 'FADS6', 'GTDC1', 'SERPINB11', 'PTPRU', 'SPINK2', 'AEBP1', 'CDHR3', 'ELMOD1', 'TRAPPC2L', 'ENTPD2', 'RNASEH2B', 'ETFDH', 'RPS10', 'RECQL5', 'ZNF292', 'P2RY2', 'COLCA1', 'ATP5H', 'DGCR5', 'SNAP25', 'MSLNL', 'PTP4A1', 'IMPA2', 'TBC1D24', 'PABPC1P2', 'LY9', 'GAL', 'USP13', 'MRPL36', 'HRSP12', 'ZCCHC5', 'TMEM150B', 'RP9', 'MGST2', 'DLD', 'ZNF296', 'RXRB', 'CD59', 'SLC38A9', 'CLDN7', 'TRIM38', 'GSTT1', 'GNG7', 'IL3', 'EIF3J', 'TMED3', 'SRP68', 'C8ORF22', 'DCP2', 'GTSE1-AS1', 'GABRG1', 'RALGAPB', 'PALMD', 'OR5V1', 'MRS2', 'PRKRIP1', 'AQP1', 'GOLM1', 'TOLLIP', 'PPP1CC', 'IKZF1', 'KHDRBS2', 'BNIPL', 'APOL5', 'PLXNA4', 'IFT27', 'RNF167', 'BRICD5', 'PEF1', 'NXPE4', 'SFT2D2', 'CCBL1', 'ITGA3', 'RSPO1', 'KIAA1715', 'KDELR2', 'NDRG3', 'LINC00319', 'DUSP15', 'RHAG', 'SLC41A2', 'SLCO1B7', 'HELT', 'SS18', 'PAPOLG', 'ADRA2A', 'PRB2', 'EHMT1', 'VPS13A', 'CLDN16', 'RSC1A1', 'MT1M', 'LMX1A', 'EIF1AD', 'ZNF667', 'MARK2', 'GALR3', 'SULT1A3', 'CDC7', 'LRRC30', 'CREBL2', 'C7ORF49', 'MAD2L2', 'TSNAX-DISC1', 'NT5C1B', 'MAPK1IP1L', 'GDF6', 'EPHA10', 'LOC284379', 'GGCT', 'ZKSCAN7', 'ANP32A', 'C1ORF21', 'EXOSC2', 'TMEM45B', 'PSPC1', 'SAMD12', 'SLAIN1', 'VENTXP1', 'CCDC18', 'LIPC', 'CLDN4', 'CT62', 'AFF4', 'CACTIN', 'WDR54', 'NEURL1', 'IGSF3', 'CSTB', 'OXA1L', 'RNF217', 'STRN', 'MMP3', 'ZSWIM8', 'CGREF1', 'PCOLCE', 'BIRC6', 'RPE', 'VSTM4', 'CLLU1', 'GEMIN2', 'POT1', 'NUDT5', 'DHRS11', 'CDK11B', 'LIN28A', 'CCDC64B', 'ERP29', 'KRTCAP2', 'LONRF3', 'GLT1D1', 'SH3GLB2', 'NGF', 'SPTLC2', 'CARD16', 'SNORA11B', 'ZFHX4-AS1', 'SORBS2', 'TMEM203', 'GCFC2', 'MTIF3', 'HIGD1B', 'ZNF639', 'ZNHIT6', 'NCOA5', 'SPDYE5', 'NR2E3', 'CTAG1B', 'SLC9A7', 'ZDHHC22', 'RIMKLB', 'OR10X1', 'TIMMDC1', 'ASTL', 'RSPH6A', 'RARS2', 'EVA1C', 'TPM3P9', 'RAB31', 'NCOA6', 'MAEA', 'KIAA1024', 'POLD4', 'FBXO25', 'C10ORF11', 'SEC22A', 'MUSK', 'PPM1D', 'C3ORF14', 'ABHD17A', 'DUSP3', 'GPLD1', 'HYOU1', 'ZSCAN16', 'EMX2', 'OR7G2', 'C10ORF62', 'AUP1', 'NFATC2', 'STON2', 'REST', 'ESF1', 'AXIN2', 'EPOR', 'CHMP5', 'WISP2', 'TFPI2', 'PRB4', 'RBFA', 'TBR1', 'TIA1', 'ZNF816', 'CELF6', 'SHANK1', 'HSP90AA1', 'ABCC5', 'SBF1P1', 'LUZP4', 'ARID5B', 'ISG20L2', 'EIF4B', 'CRYL1', 'PRAMEF4', 'TBC1D10B', 'HECTD1', 'MED29', 'OR4K14', 'SLC3A2', 'ZNF480', 'SPANXN4', 'XRRA1', 'TROAP', 'MEX3A', 'IL1RN', 'ANKLE1', 'C3ORF33', 'DAP', 'CD84', 'SV2C', 'HOMEZ', 'DOC2B', 'EDEM1', 'ID2', 'GGTLC1', 'GPR176', 'TPD52L3', 'DDO', 'LOC441204', 'CHERP', 'MRPL3', 'CLEC17A', 'LY6H', 'ID1', 'INTS4', 'FAM90A7P', 'FASTKD2', 'LSMEM2', 'LOC284632', 'SLC17A1', 'SYNPO', 'AUTS2', 'TMEM19', 'ZMIZ1-AS1', 'FBXO10', 'EPB42', 'C10ORF55', 'CD44', 'MBNL3', 'ACER1', 'PRR23C', 'TM4SF19', 'HMX1', 'RPS10P7', 'PEX14', 'RINT1', 'CDX4', 'ZDHHC4', 'NCOA1', 'LMCD1', 'OR7C1', 'H1F0', 'ACSL5', 'APOE', 'TMEFF2', 'LOC100272216', 'TEX26', 'ZFHX3', 'HSPD1', 'EFCAB5', 'ATXN7L1', 'AKAP1', 'RAD1', 'DYRK1B', 'SIGLEC11', 'GPAM', 'CCL27', 'ZCCHC9', 'HOXA3', 'CCDC159', 'ALMS1', 'DNAJB9', 'TBL1Y', 'TBC1D2', 'DGKZ', 'SREK1IP1', 'NFYC', 'COPS7A', 'LYPLAL1', 'SCN5A', 'TMLHE', 'FAM127A', 'RBBP7', 'CDH11', 'POLH', 'CDC42SE2', 'PTPN3', 'MARVELD2', 'LRMP', 'ABTB1', 'RPS15A', 'OGFR', 'POLK', 'RIOK2', 'BLOC1S3', 'GKN1', 'NECAB2', 'CCDC169', 'ZNF532', 'TUBB4A', 'VTI1B', 'PNKD', 'TRIM37', 'RPL9', 'NKAIN4', 'PRMT5', 'SCN4A', 'OR11H6', 'ADAT1', 'BDP1', 'PRKG2', 'ACVR2B-AS1', 'SIGLEC1', 'ZNF430', 'OR8G2', 'PLOD3', 'HIPK2', 'CHMP2B', 'MATN1', 'COA1', 'CGN', 'CSNK1A1P1', 'H2AFY', 'TDRD9', 'ENOX1', 'PLCB2', 'PPIL6', 'IGF2BP2', 'ZNF699', 'HMGN3', 'UBXN2A', 'PCBP3', 'CRYGS', 'MPND', 'IFNA16', 'C9ORF72', 'ANP32AP1', 'LFNG', 'SERPINA11', 'NEU3', 'RBAK', 'TECTB', 'PPP1R12A', 'PATE2', 'PPP1R7', 'SEMA6C', 'SLC27A1', 'C19ORF60', 'CCL20', 'PM20D1', 'TRIM64', 'ZNF703', 'CYP4F3', 'LRRIQ1', 'SCARNA23', 'RTN4RL2', 'ATP8A1', 'ZDHHC17', 'ZNF595', 'TSEN15', 'EPPK1', 'CRIPAK', 'ZNF709', 'IST1', 'MET', 'LBR', 'UBE2L6', 'BCL2L11', 'SMIM10L2B', 'GPIHBP1', 'ZDHHC13', 'SLC12A9', 'GPR39', 'PGBD5', 'CLIP2', 'ZNF266', 'TBC1D3B', 'DUT', 'NINL', 'GDI2', 'PMS2', 'ST6GALNAC3', 'CCDC181', 'CEP76', 'USP30', 'LUZP2', 'B3GALT5', 'MICALCL', 'NNAT', 'GPR55', 'FAM222B', 'SKP2', 'ZNF350', 'PCSK1N', 'RPL10L', 'ASB7', 'CRB1', 'ACOXL', 'MPHOSPH9', 'TNFSF10', 'SIPA1L1', 'LCE1D', 'TRPC2', 'UCN3', 'ZNF354B', 'TTLL8', 'FAM72A', 'STH', 'SPEN', 'GABRB3', 'NLGN4Y', 'TBX5', 'OR6K6', 'AFAP1', 'BCL2A1', 'ZNF664', 'MMRN1', 'OR4D5', 'PIGR', 'ZAR1L', 'PCBP1', 'GAGE4', 'B4GALT3', 'SNORA11', 'MGAM2', 'C8ORF31', 'DNAJC18', 'PLEKHA8', 'LOC100130331', 'MAN1C1', 'UTP3', 'TRIM51', 'CD93', 'GPD1', 'LOC643923', 'ZNF461', 'KDSR', 'PPOX', 'RALGPS1', 'N4BP1', 'ZNF341', 'STYX', 'TNC', 'SLC1A5', 'BCL2L1', 'PIP', 'RCCD1', 'AADACL4', 'TAS2R39', 'C19ORF66', 'COQ10A', 'PTAFR', 'DUSP4', 'PRR7', 'PEBP1', 'OR11L1', 'OR9I1', 'ERG', 'FOXB2', 'CNP', 'ITGB7', 'NKAPL', 'SOHLH2', 'LARS', 'STAC', 'RPL3L', 'ATP6V1G3', 'TCAIM', 'ZNF442', 'NOP16', 'OR11H12', 'DNHD1', 'NOTCH4', 'SSX5', 'ZNF543', 'ZNF440', 'AAAS', 'KRTAP5-6', 'HMP19', 'SNORA58', 'MGAT5', 'CREG2', 'LCMT2', 'PRPF8', 'SYCE1L', 'GPR89B', 'UNQ6494', 'WDFY3-AS2', 'COL24A1', 'CIAO1', 'DEFB108B', 'AKAP10', 'ARHGAP28', 'SLC17A8', 'CPE', 'KIAA1551', 'ZNF705D', 'ABCA17P', 'RHBG', 'MVP', 'CRX', 'ABHD1', 'KRTAP2-2', 'TMEM236', 'LAMP2', 'SPATA4', 'SYCP3', 'SEPT14', 'PPIF', 'GTF3C4', 'TSC22D2', 'MOB3B', 'WDR18', 'BAZ2A', 'C9ORF106', 'ZNF160', 'UBN2', 'KLHL3', 'GLRA1', 'OR9K2', 'SCN1A', 'ZNF670', 'PSMB5', 'MMP23B', 'SPECC1', 'ZNF679', 'TRIM74', 'ASAH2B', 'ASCC2', 'C20ORF202', 'ANKRD20A20P', 'FLT3', 'MLANA', 'TRIM71', 'TBRG4', 'MKI67', 'SUMF1', 'BACE1', 'SHD', 'C22ORF29', 'ZMYM6', 'LTC4S', 'SPATA5L1', 'PEX12', 'TRIO', 'PTTG2', 'C9ORF129', 'RDH11', 'FAM26F', 'DAW1', 'WNT3A', 'OPALIN', 'GCC2', 'ADAMTSL2', 'ALCAM', 'CGA', 'EIF4A2', 'C3ORF52', 'SCTR', 'ZNF540', 'MRPL35', 'SPATA24', 'HINT2', 'C4BPB', 'GBP4', 'SKP1', 'LOC100128239', 'MYO3B', 'SMCO2', 'FH', 'MMP10', 'CSHL1', 'SNN', 'B3GAT2', 'FXYD4', 'SMPDL3A', 'C1ORF198', 'ACVR1', 'MNS1', 'SDHAF2', 'FAM65C', 'STOX1', 'DCTN4', 'C1ORF68', 'OR11H4', 'SLC35F2', 'OR52A1', 'GOLGA6C', 'NUP210', 'APTX', 'GPC3', 'ASTN2', 'TRIM35', 'MIR17HG', 'TAC4', 'DBN1', 'PLEKHJ1', 'VWCE', 'APC', 'USE1', 'TSPO2', 'MUSTN1', 'EFEMP2', 'ERF', 'UBE2D3', 'TPT1', 'CCM2', 'RNF182', 'C14ORF39', 'SNORA45B', 'AIDA', 'EDC4', 'TTC28-AS1', 'CAPN14', 'PRRX2', 'PTPN9', 'TBPL1', 'MROH6', 'EIF4EBP1', 'XPO4', 'RPL8', 'LCE2B', 'AMIGO2', 'EID3', 'PIP5K1C', 'RPL32P3', 'NFAT5', 'SSUH2', 'ERBB2', 'RRBP1', 'ZNF335', 'SNX11', 'H2BFXP', 'RAB24', 'NR1H2', 'SHC4', 'LOC606724', 'FZD9', 'CWC27', 'CSMD2', 'STPG1', 'GLIS3', 'ETV4', 'LINC00626', 'SVEP1', 'DPH2', 'CDX1', 'PDZD7', 'FBXO47', 'CATSPER2', 'ASPHD2', 'TUBAL3', 'ZNF772', 'MSX2P1', 'VCAM1', 'RAB4A', 'NGLY1', 'LINC01098', 'OR51F2', 'ADCY10', 'AKR7A3', 'MVB12A', 'AKIP1', 'APEX2', 'KCNJ2', 'SGPP2', 'GORASP2', 'INPP5E', 'TMEM254', 'LCE3A', 'COL10A1', 'ELP6', 'TMEM189-UBE2V1', 'OTC', 'ESPNL', 'STAG3L3', 'TXNRD2', 'SECTM1', 'PLXDC1', 'ITGAM', 'VPREB1', 'CHP1', 'LINC01555', 'VWA2', 'OR10A3', 'C1QTNF1', 'FGF21', 'CD300E', 'REG1B', 'NR6A1', 'C2ORF16', 'FAM46A', 'KIF1C', 'POM121C', 'NSUN5', 'UGT1A1', 'SNORD116-19', 'FAM50B', 'LOC154449', 'AMOTL1', 'PUS7', 'STX5', 'CORO2A', 'TBRG1', 'TBXA2R', 'MAF', 'BPIFC', 'OXER1', 'TOX4', 'CEP70', 'CNKSR3', 'FAM183B', 'RUNDC1', 'KIAA1468', 'OLFML3', 'CEP83-AS1', 'SGCD', 'LAMB2P1', 'RBM48', 'CTNNAL1', 'TRIM55', 'PTTG1', 'MMP23A', 'ART3', 'USP53', 'LIN52', 'MT1B', 'FGF9', 'EXO1', 'SETBP1', 'ADAMTS14', 'IFT52', 'POLR3G', 'SERPINE1', 'OR1A2', 'OSER1', 'ADAM29', 'C16ORF96', 'ELFN2', 'PRR21', 'DZANK1', 'EXOC3', 'CBLL1', 'C11ORF73', 'PMS2P2', 'GABARAPL2', 'GOSR1', 'LRFN4', 'SPATA3', 'PLSCR3', 'KRTAP12-3', 'OR6X1', 'AFP', 'ARRB1', 'ZMYND11', 'LINC01312', 'PACRG-AS1', 'FAM206A', 'PPIAL4D', 'NOL3', 'STK35', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.2159738010165597e-15 NRMSE: 7.310082847486262e-16 MAPE: 3.4751191869189636e-12 Pearson Correlation: 0.008660195878514387 Spearman Correlation: 0.05105843332357819 Coefficient of Determination: -2.8937365899846723 RMSE: 0.4645627526321239 NRMSE: 0.3594129113016989 MAPE: 731.7570514073287 Predictor: ElasticNet Pearson Correlation: 0.7099513867138995 Spearman Correlation: 0.6890799893703482 Coefficient of Determination: 0.45049407820788523 RMSE: 0.17697774872845595 NRMSE: 0.10639390456316263 MAPE: 436.36891355533055 Pearson Correlation: 0.24597982933131204 Spearman Correlation: 0.30333625987708523 Coefficient of Determination: 0.04339802971114837 RMSE: 0.23026436743701895 NRMSE: 0.1781459796350026 MAPE: 383.69985124731176 Predictor: RandomForests Pearson Correlation: 0.5855744065789849 Spearman Correlation: 0.579030285441844 Coefficient of Determination: 0.3063896486031632 RMSE: 0.1988338220506073 NRMSE: 0.11953314379447602 MAPE: 473.83417137083103 Pearson Correlation: 0.24786918658193177 Spearman Correlation: 0.4010291678860599 Coefficient of Determination: 0.03915392858347244 RMSE: 0.2307746024906359 NRMSE: 0.17854072730908888 MAPE: 306.8201342509565 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['TCEB3C', 'TP53AIP1', 'CLEC3B', 'TMEM2', 'PABPC1P2', 'WDR12', 'SRR', 'KHNYN', 'TMEM209', 'SCEL', 'SERPINA9', 'DHX9', 'ATP2B4', 'OPN5', 'CCL13', 'VAMP7', 'UBAP2', 'TAF6L', 'ADAM21', 'TYMS', 'HDAC5', 'SLC6A19', 'GRSF1', 'TAF2', 'AWAT1', 'CCNB3', 'CWF19L2', 'RNU4ATAC', 'BRAT1', 'ZNF485', 'EDA', 'SCP2', 'LINC01341', 'SBK1', 'UNC5C', 'OR6N1', 'POLD2', 'ID1', 'LRRC66', 'RENBP', 'PIGY', 'IPO8', 'USF1', 'GRIN1', 'C12ORF49', 'NUSAP1', 'PABPC1L2A', 'FAM135A', 'VAMP5', 'COMMD8', 'USP4', 'HTATIP2', 'MRPL52', 'ZRANB1', 'EIF3E', 'PTPN4', 'SLCO3A1', 'RPL19P12', 'UNC79', 'ANKRD36BP1', 'ANGPT2', 'MED25', 'GPR160', 'CACNA1C', 'HSF5', 'DACH2', 'CDKN1C', 'TXNDC11', 'PHF10', 'MYDGF', 'TMEM186', 'URM1', 'SNAP91', 'SLC43A2', 'NUGGC', 'ATP6V0B', 'PRDM5', 'CENPC', 'MORN4', 'INTS8', 'COL15A1', 'SPAM1', 'MFSD3', 'PTAR1', 'ZNF800', 'CD4', 'HIPK4', 'MCF2L', 'DIMT1', 'ZNF207', 'PTGFRN', 'FAM163B', 'SERINC2', 'CASC2', 'KRT33B', 'THEM4', 'C3ORF38', 'MYH14', 'P2RX7', 'COL4A5', 'LRRC4', 'LILRA6', 'ZNF75D', 'SOD2', 'FAM99A', 'KATNA1', 'CLEC10A', 'RCE1', 'ADAL', 'UBE2D4', 'LDOC1', 'ZDHHC9', 'GTPBP10', 'RNF8', 'AAAS', 'POLR3G', 'SELK', 'C9ORF3', 'KLHL8', 'TAF1D', 'RRP15', 'LAS1L', 'ABCF3', 'SF1', 'NPB', 'OR9Q1', 'PRPS1L1', 'FOXL1', 'DDI2', 'FBXO6', 'NMBR', 'AASDHPPT', 'FRY', 'IFI30', 'CNPY3', 'PRR4', 'TSEN2', 'HOXB1', 'CKAP2L', 'NLGN2', 'CCDC77', 'MCF2', 'YIPF3', 'PRR23B', 'CPEB3', 'ANXA2', 'GPR27', 'PMS2P4', 'PRKAR2B', 'POTEE', 'PAGR1', 'CYB5RL', 'ABHD11-AS1', 'ZBTB2', 'CCL1', 'PCLO', 'RPL22L1', 'SPHK2', 'PRPF38B', 'ZNF846', 'OR6C4', 'NXPE4', 'LINC01138', 'LY86', 'MKX', 'CTSD', 'CRYBB2', 'DKFZP434L192', 'RELL1', 'CENPBD1', 'PLLP', 'DCAF8L2', 'PHF13', 'INSIG1', 'MIEN1', 'PPFIA2', 'SLC39A9', 'CDK5', 'METTL25', 'CBX1', 'HIST1H3C', 'FAM72B', 'RALGPS1', 'CABLES1', 'FANCF', 'TTC8', 'ADRBK1', 'TKTL1', 'TCN1', 'GNG5', 'ZNF91', 'DDIAS', 'LINC00442', 'NEURL1', 'UQCC3', 'NLRX1', 'XPO1', 'LINC00238', 'ADAM20', 'RASSF6', 'TRIO', 'SLIRP', 'BRI3BP', 'CDCA3', 'PP2D1', 'TRAPPC11', 'IFNA16', 'RHOXF1', 'NAP1L2', 'C20ORF202', 'LMNTD1', 'TIMM10B', 'ELFN2', 'LOC145845', 'UBE2W', 'WWC3', 'FASN', 'CCDC62', 'UBA7', 'NBEAL1', 'PROM1', 'POLD3', 'BAIAP3', 'TEAD4', 'SERPING1', 'DCLK2', 'LOC146880', 'VBP1', 'TNFSF14', 'ATL2', 'TACC3', 'OR51T1', 'NR2F1', 'FAM179B', 'LINC01001', 'DDX11L2', 'ZNF878', 'STAT4', 'PIN1P1', 'C10ORF91', 'RPL22', 'DDB1', 'KLHL17', 'ACSM4', 'SKOR1', 'LMO3', 'MYO1D', 'B4GALT3', 'PLS3', 'FAM181A', 'MTMR11', 'CYP3A4', 'KANSL1', 'KAZALD1', 'PLP2', 'TXLNB', 'METTL21C', 'HYPK', 'CA5B', 'CBWD1', 'GAS2', 'TUBA4B', 'WIPF1', 'RAD52', 'FBP1', 'NOP9', 'SOWAHD', 'LAG3', 'SPAG11B', 'OR1J1', 'RAB21', 'INE1', 'CT62', 'HOOK2', 'CCDC7', 'ZNF771', 'IDUA', 'DDX59', 'NHLRC4', 'TCEAL4', 'CCNE1', 'MMP10', 'NUP205', 'THOP1', 'KIAA1211L', 'OR51E1', 'RPE', 'RAB11A', 'TMEM69', 'TMEM126B', 'PIAS1', 'LINC00426', 'CELF3', 'SH3BGRL2', 'NOD1', 'CTU1', 'ATP8A1', 'FUT7', 'RPL26L1', 'NCK1', 'GNGT2', 'SLC38A10', 'EIF3B', 'YBX2', 'COX7C', 'TRIP10', 'BEND5', 'UGT1A3', 'LACC1', 'FABP3', 'ERICH5', 'NPM2', 'VPS8', 'PSMA1', 'DEFB119', 'SLC25A41', 'NBPF7', 'STRN', 'PGA3', 'PPP2R5A', 'GOLGA2P3Y', 'DUOX2', 'PRSS33', 'ABHD4', 'PLCH1', 'RAB9B', 'CKS2', 'CDKL4', 'GBX1', 'PDCD5', 'FAM86JP', 'NPVF', 'RIN3', 'LGALS9B', 'NCAPG2', 'RASIP1', 'RRBP1', 'KRTAP15-1', 'DMBT1P1', 'SMS', 'LOC341056', 'GCG', 'TGFBRAP1', 'CDK3', 'PLAC1', 'TAF5L', 'SNORD116-4', 'HSD17B2', 'OR4M1', 'SPATA22', 'TMEM168', 'BOP1', 'ATP13A4', 'GABARAPL2', 'PASD1', 'FETUB', 'CRHBP', 'ALX3', 'KLRAP1', 'IL12B', 'PRLR', 'TPM2', 'RHOD', 'HNRNPU-AS1', 'MAST3', 'TAF9B', 'SYF2', 'TAS2R3', 'DRG1', 'WDR7', 'YPEL2', 'SNRPGP15', 'MATN2', 'TIGAR', 'MAPK9', 'FBXO39', 'GJD4', 'RBBP5', 'FUK', 'AOX2P', 'C11ORF24', 'ALDH1L1', 'AIPL1', 'SOX7', 'PRO0628', 'ISG20', 'DUSP27', 'SLC38A1', 'ZNF354A', 'PHLDA3', 'EGFL7', 'TUBA3FP', 'SH3D21', 'ANKAR', 'CEP76', 'MRPL48', 'TTC27', 'RPL32P3', 'BCDIN3D-AS1', 'GINS4', 'SAMD11', 'RALGAPA2', 'GNAI2', 'PIK3AP1', 'KDR', 'SPTLC1', 'LRRC43', 'ZNF655', 'SLC25A38', 'POLR2F', 'ATPIF1', 'WBSCR22', 'UNK', 'GPR89B', 'CCNI2', 'KLHDC8B', 'CTAGE4', 'ELAVL1', 'LDHD', 'C8ORF4', 'GGT5', 'LCE1C', 'WSCD1', 'CHMP2A', 'LINC00632', 'LDLRAD2', 'UCN2', 'SHMT1', 'LRRC55', 'CYP8B1', 'EHD4', 'MAP4K1', 'TMCO6', 'NUBP1', 'SESN3', 'OPRL1', 'NAA10', 'ACRV1', 'AADAC', 'LRP11', 'H6PD', 'WDFY1', 'ZNF71', 'NUP43', 'PCTP', 'HNRNPK', 'ADGRA2', 'FAM156A', 'HEY2', 'HIST1H1C', 'DNAJB8', 'EML4', 'MROH2B', 'LOC645166', 'DCANP1', 'CLEC1B', 'AQP9', 'KCTD17', 'ARHGDIG', 'B4GALNT1', 'SLC37A4', 'GNAZ', 'PROKR1', 'PCDH9', 'SS18L1', 'OXNAD1', 'AGAP2-AS1', 'RSPH4A', 'SHCBP1', 'ALLC', 'KRT20', 'STX11', 'GSTZ1', 'MED19', 'VAT1L', 'LINC00620', 'HIRA', 'SUCLG1', 'OR10X1', 'PAN3', 'GNG4', 'DBP', 'BRF1', 'PADI4', 'DLX5', 'ACTL7A', 'SNORA65', 'TTYH2', 'LOH12CR2', 'HLA-DQB2', 'FAM21A', 'SLC16A1', 'APOBEC4', 'RNF115', 'PHGDH', 'LOC391322', 'ZNF614', 'PIGW', 'AMN', 'P2RX1', 'LARP1', 'C7ORF62', 'HRAS', 'CDK15', 'TAS2R46', 'MSMB', 'LOC606724', 'MIR4697HG', 'ZNF772', 'OR56A4', 'CLEC4M', 'SPINK2', 'PPP1R16B', 'MTNR1A', 'VIL1', 'CAND2', 'SH2B1', 'SELE', 'C20ORF27', 'ZNF117', 'OR5C1', 'DHFR', 'CACFD1', 'CNKSR2', 'NXF5', 'PSMD5-AS1', 'NRN1L', 'TMPRSS4', 'C3ORF35', 'HMX2', 'WDR3', 'SLC39A1', 'SEZ6', 'XIAP', 'ZYX', 'SST', 'CLEC17A', 'C8ORF82', 'DOLK', 'SNED1', 'GOLGA8F', 'C1RL', 'NODAL', 'PRB1', 'FGF13', 'SPNS1', 'TATDN2', 'MAP2K3', 'OMG', 'FOXJ2', 'ZFPL1', 'LMNTD2', 'TNFRSF1B', 'STRADA', 'UCKL1-AS1', 'NAPEPLD', 'ZNF703', 'B9D1', 'LCA5L', 'ZNF570', 'PNLIP', 'MIA2', 'SERAC1', 'OTUD6B', 'SRP72', 'WBSCR16', 'CRBN', 'ANKEF1', 'PIANP', 'TIMM17B', 'QPRT', 'HOPX', 'CDHR4', 'TUBGCP2', 'DDX49', 'ZNF304', 'PAFAH1B1', 'PKIB', 'ANKRD31', 'C12ORF29', 'C6ORF48', 'RNASE12', 'EFCAB12', 'BAG4', 'PPP5C', 'ST6GAL1', 'CHID1', 'ZNF484', 'RPH3A', 'NDUFS7', 'NAA25', 'LOC728323', 'SMARCAL1', 'YWHAH', 'TP53INP2', 'HMSD', 'ERLIN2', 'PIGA', 'TP53INP1', 'C14ORF166', 'CENPF', 'TMEM132B', 'MAD1L1', 'GREB1L', 'CASC3', 'MUM1L1', 'LOC653786', 'CHI3L1', 'SNCB', 'DNAJC15', 'HES7', 'EPB41L3', 'PDK4', 'COA3', 'CRYBA1', 'MAFB', 'POLB', 'MFF', 'NOB1', 'MAP1A', 'TTC28-AS1', 'VCX3B', 'KPNA5', 'DERA', 'FHL5', 'OR4D5', 'TSEN34', 'IGSF9', 'KLF11', 'PDE7A', 'POLR2J2', 'SERINC4', 'FAM127A', 'CD9', 'YES1', 'RPL3L', 'ZC3H12B', 'MEX3B', 'MYBPHL', 'PAXBP1', 'ECI1', 'LOC285696', 'ISL1', 'C1ORF52', 'LMX1B', 'SPINT3', 'LCN6', 'KCNE2', 'CRIP3', 'TNFRSF11B', 'KCNK1', 'PLAGL2', 'CAMK1D', 'COQ10B', 'AIRE', 'PRIMA1', 'DTNBP1', 'GSC2', 'MVB12B', 'VPS13B', 'TM4SF4', 'CHODL', 'MTERF1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 2.8771611165376333e-15 NRMSE: 5.163327739959502e-16 MAPE: 2.6427904640718416e-12 Pearson Correlation: 0.44920398704069553 Spearman Correlation: 0.2671690566773974 Coefficient of Determination: -1.389518902227925 RMSE: 1.6342295030183822 NRMSE: 0.2784178923996767 MAPE: 4295.427382779249 Predictor: ElasticNet Pearson Correlation: 0.9380196782692855 Spearman Correlation: 0.8689252940682242 Coefficient of Determination: 0.872183239720915 RMSE: 0.35144006880294687 NRMSE: 0.06306912205066971 MAPE: 251.5779393683374 Pearson Correlation: 0.8133387470769323 Spearman Correlation: 0.5179494683445518 Coefficient of Determination: 0.654091413076171 RMSE: 0.6217824833003863 NRMSE: 0.10593087948283325 MAPE: 260.51903612295615 Predictor: RandomForests Pearson Correlation: 0.8540016008371251 Spearman Correlation: 0.7013939151468568 Coefficient of Determination: 0.7244882179882158 RMSE: 0.5159735751772241 NRMSE: 0.09259615870954975 MAPE: 265.403050426501 Pearson Correlation: 0.8059970018227527 Spearman Correlation: 0.5313398410274236 Coefficient of Determination: 0.6269807039511065 RMSE: 0.6456891081379279 NRMSE: 0.11000376648515732 MAPE: 1413.9159342300354 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['ZP2', 'RNASE7', 'KIF2B', 'VASP', 'MBD3L1', 'PCAT4', 'CXCL12', 'HOMEZ', 'TEP1', 'NIPAL3', 'C2ORF78', 'UBQLNL', 'SERINC5', 'SIGLEC10', 'C2', 'SELP', 'CD209', 'ARHGAP8', 'CYB561A3', 'ALDOA', 'NODAL', 'SMARCE1', 'EPHX2', 'TGFBR2', 'TCEB2', 'CSRNP2', 'TM6SF1', 'SERPINE3', 'ARPC4', 'CCDC66', 'HSFY1P1', 'RBM39', 'ORAI1', 'PARK7', 'EIF4EBP3', 'FAM129B', 'CPEB1', 'LOC100128239', 'TGFB3', 'SLC26A9', 'AGAP4', 'ARSK', 'C20ORF202', 'TTLL3', 'CDKN1B', 'NOP14', 'PON2', 'REG1A', 'RPE', 'CLRN3', 'PSG3', 'PDF', 'EPC2', 'SLC44A3', 'INGX', 'C1ORF52', 'FAM86C2P', 'DCHS2', 'CENPBD1P1', 'SHMT2', 'LIN37', 'ZC2HC1C', 'SERPINA7', 'CCDC91', 'MUC20', 'VGLL4', 'TPM3', 'SUCLG1', 'TSPAN7', 'KIAA1161', 'NUCB2', 'CPEB2', 'B3GAT1', 'ARHGDIA', 'ATPAF1', 'NDUFA6', 'NAPSB', 'KRT75', 'SLC23A3', 'ZNF454', 'EGFL7', 'FAM90A7P', 'GLB1L2', 'OR1G1', 'IFNW1', 'RASGEF1C', 'RAD52', 'PPID', 'CAST', 'CPEB4', 'ZNF542P', 'OPLAH', 'OR6C2', 'FAM104B', 'NFU1', 'ZNF175', 'SNORA22', 'CIDECP', 'CCDC60', 'OR6M1', 'TPP2', 'POSTN', 'NDUFB3', 'GBP1', 'NUMBL', 'SAA3P', 'MMEL1', 'ADRBK2', 'ABHD6', 'REXO1L6P', 'PAX1', 'RPL36', 'ZNF480', 'EXD3', 'RNMTL1', 'PDGFB', 'KIAA0895', 'PCDH7', 'PTPRJ', 'MYO1B', 'GPR63', 'PF4', 'NDST4', 'FTH1', 'PIGL', 'PARVG', 'BCL2L2', 'MRPL41', 'PRR15L', 'DNPH1', 'ZNF732', 'PROKR1', 'CKB', 'PSRC1', 'JMJD1C', 'REEP1', 'DHFR', 'TCIRG1', 'EML1', 'UGDH', 'SPANXN4', 'TRPV2', 'HMG20B', 'YIF1A', 'PSMD11', 'TRIM64', 'NCEH1', 'B3GALT4', 'ACTR3BP2', 'LINC00174', 'KRT33A', 'SMG1P3', 'COL6A5', 'FERMT2', 'HIST2H2BE', 'THUMPD2', 'CENPO', 'GTPBP10', 'C12ORF66', 'LINC00200', 'RABEPK', 'CATSPERG', 'SLC2A12', 'NXF4', 'OR2A1', 'PDSS2', 'GOLGA6D', 'LOC100240735', 'SNORA54', 'SDC3', 'PPP2CB', 'CELA2A', 'NLRP10', 'CADM2', 'PHF11', 'ZNF417', 'ARFRP1', 'BTN2A1', 'LYSMD2', 'ZNF775', 'KLF14', 'NEUROD2', 'ODF2', 'NTHL1', 'C2ORF50', 'GLIDR', 'SPTLC2', 'CD40', 'MRGPRX2', 'CCDC137', 'OR5H15', 'GUSBP5', 'LAMP2', 'PLCB2', 'CYP3A5', 'LINC00526', 'GTF2B', 'RPS27L', 'LOXL3', 'C12ORF49', 'GLTSCR1L', 'KYNU', 'KLHL24', 'KCNMB3', 'EIF4G1', 'LAT2', 'RAD51B', 'CXORF66', 'TCHHL1', 'CR1L', 'CSRP1', 'YBEY', 'VIMP', 'OLFM3', 'OR2C1', 'TPTE', 'SLC35D2', 'BTG4', 'LGALS7', 'PPP2R1A', 'TAGAP', 'ATP6V1D', 'SLC6A11', 'CLTA', 'ISM2', 'SNX7', 'GJA5', 'CCER1', 'LINC01600', 'TOMM6', 'SULT4A1', 'LECT2', 'PRDX1', 'SSU72', 'SAFB2', 'SNORD116-28', 'MMP16', 'ERAP2', 'SLC9B2', 'SLC25A21', 'LOC152225', 'SZT2', 'PRSS23', 'LINC00523', 'SOWAHA', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.7923663380157087 Spearman Correlation: 0.7735071780677023 Coefficient of Determination: 0.6278444136204242 RMSE: 0.27155144645630097 NRMSE: 0.07328394143153256 MAPE: 156.10883363270875 Pearson Correlation: 0.009229316217113289 Spearman Correlation: 0.0228904497122232 Coefficient of Determination: -0.9877861074514585 RMSE: 0.7300058003598618 NRMSE: 0.2694155943740056 MAPE: 452.42142925330296 Predictor: ElasticNet Pearson Correlation: 0.6814947046421146 Spearman Correlation: 0.6808885784709443 Coefficient of Determination: 0.43784462570210547 RMSE: 0.33374750880814413 NRMSE: 0.0900688735324113 MAPE: 176.9814777074006 Pearson Correlation: 0.28226201848978516 Spearman Correlation: 0.3370793093356746 Coefficient of Determination: 0.05537568111915081 RMSE: 0.5032352407166033 NRMSE: 0.18572375920954953 MAPE: 318.0568666382561 Predictor: RandomForests Pearson Correlation: 0.5769568527205187 Spearman Correlation: 0.5701297942056632 Coefficient of Determination: 0.30708957551074423 RMSE: 0.3705342832560959 NRMSE: 0.09999656811581145 MAPE: 197.99575564870852 Pearson Correlation: 0.38410263340786055 Spearman Correlation: 0.3845836799062012 Coefficient of Determination: 0.1441734093330912 RMSE: 0.47899874258276154 NRMSE: 0.17677904870580477 MAPE: 358.9589793423459 Fold: 3 Protein: RB1 x_train_column_count: 371 x_train columns: ['TINCR', 'OR4C15', 'TEX9', 'PCGF5', 'LINC00520', 'PEX1', 'GUSBP4', 'RAG1', 'CEACAM20', 'IGSF10', 'TMSB4XP8', 'C16ORF93', 'PKP1', 'RAD21L1', 'SMOC2', 'GINS4', 'ZBED5', 'RBAK', 'SNAR-B2', 'RGL2', 'PCDHA9', 'CAP2', 'ZPLD1', 'COLEC12', 'FAM110D', 'NIT2', 'CD209', 'HCG18', 'FCRL3', 'MAP3K19', 'TOPBP1', 'HIST1H3F', 'BMS1', 'ATAD2B', 'AREG', 'PIN4', 'SLC26A10', 'ENC1', 'DSN1', 'LRRC17', 'TEX36-AS1', 'ALX3', 'TTK', 'PELI3', 'TPTE2P3', 'GOLGA6L1', 'AGTR1', 'CBLL1', 'CDS1', 'CDK14', 'C16ORF70', 'CTAGE4', 'MARVELD2', 'ZRANB2', 'SF3A3', 'ERG', 'CTSG', 'NR4A3', 'KCNJ16', 'SUPT20HL1', 'POU2F2', 'OXTR', 'A4GNT', 'CCDC91', 'PEMT', 'DNAAF5', 'BLID', 'MTUS2', 'NDP', 'ASCL2', 'C1R', 'DSEL', 'RAB40AL', 'BHLHE40', 'VTI1A', 'GGH', 'TCEA1', 'GRIK1-AS1', 'IGF2BP1', 'SERBP1', 'INTS12', 'SNRPB', 'FAM178A', 'COL15A1', 'AMPD1', 'PAK6', 'NPW', 'ZNF676', 'SYNE2', 'IL17D', 'AXIN1', 'NCAPD3', 'POLD3', 'ARHGEF7', 'CCDC39', 'OR9Q2', 'PDP1', 'ULK3', 'IZUMO4', 'CLIP4', 'SOX21', 'KDM6A', 'DNMT3L', 'FXYD6', 'ZC3H12B', 'TM7SF3', 'ASTE1', 'ARFIP2', 'TMEM79', 'QSER1', 'SRXN1', 'PES1', 'TMEM45B', 'RSPH10B2', 'TENM4', 'DHCR7', 'SLC5A9', 'CDC6', 'TAT', 'CHST3', 'EXOSC1', 'SDHAF4', 'PLCE1', 'GKN1', 'HOXB2', 'KRTAP10-11', 'THOC5', 'ERBB2', 'PIFO', 'FRMD3', 'SEMA6C', 'DNAJC5B', 'TRPC5', 'TFAP2C', 'FAM120A', 'PITPNB', 'SLC4A5', 'CCPG1', 'FAM72B', 'RABGAP1L', 'NDUFAF7', 'ABCG2', 'KLRC2', 'ADAMTSL2', 'MORN2', 'PCDHGA11', 'DNAJC18', 'LOC154449', 'IFNE', 'TMEM27', 'SDHAF2', 'TOB2', 'CEP76', 'CFAP221', 'LY6G5C', 'MED25', 'FAM138F', 'NUTM1', 'RGS19', 'SHARPIN', 'RGS2', 'TEX10', 'KLF14', 'ADAMTS16', 'TRIB3', 'CMTR1', 'RPS27L', 'FAM90A1', 'GMEB2', 'PFN2', 'NBR2', 'CCNC', 'ACSM6', 'ARRDC2', 'CFC1B', 'DDX46', 'ADAM28', 'DRG1', 'DDX1', 'YWHAE', 'LRRCC1', 'LSG1', 'PNPT1', 'CRKL', 'B3GALNT2', 'BAIAP2-AS1', 'CDH23', 'COLEC10', 'FBL', 'ADGRF3', 'USP5', 'CEACAM22P', 'NME6', 'BEST2', 'IGFBP3', 'LAMA5', 'ILF3', 'ZNF319', 'CDHR1', 'TXLNB', 'AGAP5', 'DDX20', 'ZCCHC10', 'ACOX2', 'CES3', 'PLA2G2C', 'C10ORF128', 'MYL7', 'PDCD6', 'TNIK', 'LOC286359', 'CCDC168', 'EPM2AIP1', 'STXBP5L', 'HDLBP', 'ABCG1', 'PLXNB3', 'GPR89A', 'DPY19L2P4', 'DUSP12', 'LOC654342', 'ZNF384', 'HIST1H2AE', 'TMEM200B', 'PIK3IP1', 'APOA4', 'GPR4', 'POLR3E', 'NAT8', 'GANC', 'ADIG', 'PREPL', 'RPS3A', 'MORC4', 'PLP2', 'OR2AG2', 'OR5B12', 'LCNL1', 'S1PR3', 'BPIFC', 'BPHL', 'CEP290', 'ANKRD34B', 'ZNF320', 'CASP2', 'SMR3B', 'NLRP3', 'CXADRP2', 'KRT14', 'UBN2', 'EIF3J', 'TBC1D2B', 'KLRC1', 'PDSS2', 'NBPF10', 'LGI3', 'GTF2E1', 'LINC00479', 'MYNN', 'ID2B', 'NUP214', 'C9ORF69', 'USP22', 'FAM65C', 'QRFP', 'WWTR1', 'TRAF3', 'RIMS1', 'CALCB', 'STK19', 'ARL9', 'FBLL1', 'DSG3', 'LONRF3', 'HEATR5B', 'MIPEP', 'SFXN5', 'TIAL1', 'LCE6A', 'MOV10', 'FUT2', 'LYL1', 'SOWAHA', 'ZNF583', 'SCARNA8', 'SHC1', 'SH2D1A', 'UQCR11', 'ROPN1L', 'ADCY10', 'CERS5', 'PAPSS1', 'ZNF81', 'SLC44A1', 'MRPL23', 'CAMK2B', 'LYPD6', 'HHIPL1', 'ADGRG2', 'PSORS1C2', 'XAGE3', 'SEPT7P9', 'AQP1', 'PRR35', 'CAPNS1', 'PCDH18', 'ANKRD34C', 'CRHR1-IT1', 'UGT8', 'TRMT112', 'PDIA2', 'ABCA5', 'MED29', 'HTRA2', 'PLOD1', 'KRBA2', 'TRAF3IP3', 'PDIA3', 'LOC283332', 'STATH', 'EFHC2', 'PIGX', 'C17ORF78', 'IFITM1', 'APOM', 'PRSS38', 'DUS3L', 'ZNF469', 'P2RX3', 'KDR', 'ST8SIA6', 'HOXA2', 'PTBP3', 'C2ORF88', 'SPAG17', 'ABCC4', 'ATP13A4', 'PSMD11', 'TMEM63C', 'TMED8', 'ARMC2', 'TNFRSF14', 'METTL4', 'KCNV2', 'XRCC5', 'GTPBP8', 'GFOD2', 'ARPP19', 'OR4F29', 'ANKRD2', 'RER1', 'TXLNG', 'C11ORF58', 'TTC17', 'CCDC94', 'SNORA21', 'HIST1H2BC', 'RPS12', 'ABCC5', 'KRTAP24-1', 'ECEL1', 'FAM122C', 'NAP1L2', 'ERAP1', 'RAB31', 'TUBB6', 'QSOX1', 'RPS2', 'ZNF593', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.8210812886084685 Spearman Correlation: 0.7698232011241383 Coefficient of Determination: 0.6741744825029432 RMSE: 0.13732643148174514 NRMSE: 0.05022177862849076 MAPE: 358.0824021931096 Pearson Correlation: -0.10026600904844926 Spearman Correlation: 0.01110487661940922 Coefficient of Determination: -6.212398432228313 RMSE: 0.5953016966211498 NRMSE: 0.4177145379549727 MAPE: 1454.9711831349202 Predictor: ElasticNet Pearson Correlation: 0.5163625772617901 Spearman Correlation: 0.4560960034930312 Coefficient of Determination: 0.22930694335519852 RMSE: 0.21120408366305163 NRMSE: 0.0772396444057386 MAPE: 238.5714940289903 Pearson Correlation: 0.2074382376180473 Spearman Correlation: 0.2009725807054951 Coefficient of Determination: 0.022458257855876518 RMSE: 0.21916183135270934 NRMSE: 0.1537826679152289 MAPE: 275.956482358485 Predictor: RandomForests Pearson Correlation: 0.6267172163923209 Spearman Correlation: 0.47073832565579193 Coefficient of Determination: 0.20123009597019814 RMSE: 0.2150168199844885 NRMSE: 0.07863400379772106 MAPE: 163.2984432191595 Pearson Correlation: 0.10739417349714067 Spearman Correlation: 0.19786032244791085 Coefficient of Determination: -0.020625090684332603 RMSE: 0.22393933565461663 NRMSE: 0.157134973163771 MAPE: 233.88906398041698 Protein: CDH1 x_train_column_count: 836 x_train columns: ['RASD2', 'SAMD15', 'NDP', 'SNX29', 'ERCC6', 'GOLGA2', 'TBC1D22B', 'SAXO2', 'PARP4', 'RUNX3', 'ASF1B', 'VSTM1', 'PAG1', 'TBX10', 'MAD1L1', 'SHC1', 'OMG', 'CDH2', 'CASP10', 'ATP6V1E1', 'TAF1B', 'SYNGAP1', 'CREB3', 'SEC1P', 'GLIPR1L2', 'DSCR10', 'MRPL34', 'TMEM132D', 'SARAF', 'NAA15', 'SERPINB11', 'IGFL2', 'CTNNA3', 'ZNF716', 'NUP35', 'AARS', 'ADGRG1', 'C8ORF37', 'OR7C2', 'NHEJ1', 'SLC30A10', 'SLC26A11', 'SF3A2', 'PRAMEF2', 'LHX9', 'SIGLEC9', 'CHML', 'CFHR1', 'MIF', 'TWISTNB', 'CST13P', 'NTMT1', 'NUDT6', 'PSMD7', 'ZNF354A', 'CROCCP3', 'TMEM215', 'GMPPA', 'RAB34', 'RAD52', 'NXN', 'RNF125', 'RHOBTB1', 'CDPF1', 'CSF3', 'DYX1C1', 'PBX3', 'HIST1H2AC', 'OTOR', 'SERPINB12', 'MRPL54', 'GALNT1', 'SIKE1', 'CFAP221', 'FAM177B', 'GALNTL5', 'RPS20', 'CCT8', 'HILS1', 'FILIP1', 'LOC729609', 'FLJ23867', 'ZNF552', 'PALM', 'UGT2B10', 'STEAP1B', 'STK35', 'KCNT1', 'OR4N2', 'ARPC5L', 'IRF4', 'PCDHGA12', 'MYH8', 'AQP12B', 'C9', 'ATP8B2', 'EDA', 'METRNL', 'NRM', 'RASL11B', 'DDX51', 'RABIF', 'BTG4', 'DNAH1', 'SLMO1', 'RPL18A', 'RNF182', 'TTC22', 'RNFT2', 'FBXW10', 'FBXO22-AS1', 'DEFB135', 'ANAPC15', 'SYT16', 'NKG7', 'CRADD', 'ITGAM', 'CCDC30', 'METTL17', 'UMPS', 'GLTSCR1', 'GNPDA1', 'RNH1', 'MEG3', 'MADCAM1', 'APOM', 'SSUH2', 'SH3BP2', 'GAPDHS', 'PPP1R7', 'STPG2', 'CNKSR3', 'GLMN', 'TRIM8', 'ZFP36', 'RPEL1', 'PRPF19', 'RFX2', 'QRFP', 'ADIRF', 'ANKRD36BP2', 'AKIRIN2', 'KDELR3', 'TMEM56', 'TMPRSS15', 'AMY2A', 'GAS2', 'OR10H3', 'PPP1R21', 'SLC22A13', 'TEX26', 'MLXIP', 'CEP104', 'C20ORF194', 'DHPS', 'ZNF486', 'C11ORF24', 'RAD54B', 'HAUS7', 'SALL3', 'PROK1', 'NFIX', 'EMILIN2', 'EIF4E', 'MSRB2', 'STAM2', 'LINC00264', 'LINC00293', 'NPTX1', 'IFT80', 'SYNPO', 'NDOR1', 'DCLK2', 'ZFPM1', 'ZNF513', 'C20ORF24', 'GIMAP8', 'NPPC', 'IFT140', 'KHDC3L', 'PXDN', 'LRRC37A2', 'TMEM116', 'TYW3', 'AHCY', 'SLC5A12', 'NOSTRIN', 'GNB2', 'BUD13', 'CSF2', 'NNAT', 'TNK1', 'CHST8', 'CNGA2', 'ANKRD23', 'NKAIN2', 'BBS7', 'CCL7', 'AMN', 'YTHDC1', 'ALG1L', 'CDK5RAP3', 'MDC1', 'KRBA2', 'ZFP91-CNTF', 'URM1', 'C9ORF69', 'ARFGAP3', 'OR4F5', 'NRXN2', 'TCERG1', 'APOL2', 'MCM2', 'FLAD1', 'GRIPAP1', 'DNAI2', 'UCKL1', 'SCGN', 'SUPT20HL2', 'HNRNPCL1', 'SNORA49', 'GPR65', 'PDGFB', 'PCYOX1L', 'RPL7', 'KCNA3', 'CDC42BPG', 'TMEM150A', 'UBQLN3', 'CNDP1', 'ELMOD2', 'SPATA3', 'RAD51', 'OR12D3', 'PTH2R', 'SRSF9', 'HCG18', 'TCEAL1', 'DDX53', 'XRCC3', 'TSPAN2', 'FAM208A', 'LGALS4', 'LRRC7', 'FOXS1', 'ZNF251', 'DEFB115', 'WNT11', 'C17ORF77', 'NKX1-2', 'SNORA12', 'DEFB119', 'FMO9P', 'SYS1', 'ME2', 'NFX1', 'PEX2', 'CIAO1', 'PAIP2', 'H2BFM', 'ACSL1', 'TP53BP2', 'C11ORF49', 'APPL2', 'C11ORF71', 'GALNT16', 'LMF1', 'MRO', 'SMPD2', 'PDIA2', 'B3GNT8', 'SSBP3', 'HOOK2', 'HIST1H2BJ', 'SLC17A6', 'RAB3B', 'PDE1A', 'HBP1', 'FRMPD2', 'RNF169', 'FBLIM1', 'TAF6L', 'COL1A2', 'LINC00896', 'SLC4A2', 'LIPI', 'AFF1', 'C17ORF75', 'FBXO21', 'PLLP', 'ADRBK1', 'SRD5A1', 'LOC284441', 'OR52W1', 'SBSN', 'NKRF', 'SAV1', 'CKAP2L', 'CHEK2', 'TRMT1L', 'CSNK2B', 'UGT2B4', 'EML5', 'TUBB4B', 'KLHL7', 'SDSL', 'GOLGA2P6', 'RRAS2', 'ZNF436', 'RFC4', 'OR2C1', 'C15ORF26', 'A1BG-AS1', 'KMT2E', 'RAP1GDS1', 'GPR141', 'ZDHHC16', 'CPSF2', 'LPPR3', 'GCH1', 'TNNT2', 'NAGA', 'FOXK1', 'RAB42', 'GATA1', 'PVALB', 'CLEC2L', 'CYSTM1', 'PSMB7', 'SAMD4A', 'LKAAEAR1', 'PQLC1', 'WASH2P', 'RBMXL3', 'INS', 'DDX3Y', 'PAPOLA', 'TNFSF18', 'USE1', 'SLC5A6', 'SYNE3', 'S100A3', 'DENND4B', 'FAHD1', 'PPP6R2', 'SNORA40', 'SLC25A53', 'TMEM47', 'PIGV', 'GFI1B', 'BARHL2', 'TSPAN12', 'PPP1R13B', 'TMPO-AS1', 'PRPF3', 'SCAMP3', 'DPH2', 'NLGN2', 'NRDE2', 'ZNF487', 'C4ORF32', 'C6ORF89', 'PNN', 'PRRG2', 'TMEM26', 'CECR5', 'POSTN', 'DNAH9', 'FABP6', 'APOBR', 'ABAT', 'KCTD10', 'SCML4', 'PTER', 'SLFN13', 'YME1L1', 'KRTAP24-1', 'CTTNBP2', 'RTF1', 'GTF3C2', 'CHST13', 'HPGDS', 'OR9I1', 'GAPVD1', 'ENAM', 'ITFG2', 'OPRK1', 'PUS3', 'EPPIN', 'SF3B6', 'PCK1', 'PLCG2', 'RPS12', 'PPFIA2', 'MMP1', 'SLC35F6', 'STARD5', 'SFTA2', 'ZNF574', 'MUC21', 'RASGRP2', 'MAP7D1', 'C11ORF16', 'TDRG1', 'SUSD3', 'NDRG1', 'ACTL6B', 'CLEC16A', 'YIF1B', 'CSRNP3', 'LOC100190986', 'MAP3K19', 'SPATA33', 'KISS1R', 'CXCL8', 'VPS36', 'RNF17', 'STEAP3', 'NDUFAF6', 'SNORA5C', 'SLC33A1', 'C15ORF62', 'FAM104A', 'SDS', 'LSM2', 'PELI3', 'PRSS22', 'RAB33B', 'ZNF25', 'WNK3', 'NDUFAF1', 'STK16', 'PTPRC', 'MGC27382', 'PCID2', 'PCDHGC3', 'IHH', 'SCHIP1', 'PGM2L1', 'PABPC1L', 'SNX12', 'NF1', 'GCC2', 'PANX3', 'BIN3', 'XRN2', 'GTF2B', 'RNASEH2B', 'RPL19', 'LINC00696', 'ZNF208', 'TMC3', 'CCDC110', 'CILP2', 'TOR1AIP2', 'MYCNOS', 'SPAG11B', 'RPSAP9', 'INE1', 'TSPYL2', 'HIST1H1D', 'CNNM3', 'BDNF-AS', 'CCT6A', 'NXNL2', 'ZKSCAN2', 'ENC1', 'CD1D', 'ACSS1', 'UNC93A', 'RASAL3', 'COL4A6', 'MPV17L', 'DNM1P46', 'MRS2', 'TBXAS1', 'LPO', 'TMEM81', 'ARF5', 'UST', 'PPP1R1B', 'DSC1', 'WWOX', 'CD99L2', 'SMCR5', 'ADGRF1', 'SNORA71E', 'BTBD6', 'ELK1', 'SMO', 'LRRC57', 'PLAGL2', 'HIVEP2', 'KIAA1551', 'CENPBD1', 'KRTAP19-6', 'IFT88', 'CDKL2', 'RNMT', 'UGCG', 'SCARNA21', 'C6ORF52', 'EHD3', 'GALR1', 'AMH', 'HSPB3', 'COL5A3', 'KLK11', 'CATSPERB', 'NKAP', 'PAPPA2', 'NLN', 'IFNB1', 'LINC00620', 'SFPQ', 'TIMM17A', 'CELA3A', 'CCDC122', 'TMEM252', 'EXT2', 'HS6ST2', 'RMRP', 'NKD2', 'CEACAM4', 'LINC-PINT', 'SMIM10L2A', 'FOXI3', 'IFITM5', 'SREK1', 'MON1A', 'U2AF1', 'CLMN', 'ECHDC3', 'ELK3', 'HMOX2', 'RABGGTA', 'GCLC', 'MOV10', 'CCDC178', 'SERINC2', 'LINC01106', 'KIAA0556', 'CFAP69', 'CTTNBP2NL', 'FBRS', 'FMNL2', 'GFPT1', 'COMMD2', 'OR2Y1', 'GPLD1', 'MEPE', 'ASB16', 'MRAP2', 'TGM7', 'WFDC8', 'EHMT1', 'ADAM2', 'EBP', 'PUS7', 'ADCY1', 'COMT', 'ARRDC2', 'CTSW', 'NOP58', 'FCAMR', 'PPIP5K1', 'MDP1', 'NEGR1', 'DCAF12L2', 'XRCC1', 'INPP5D', 'MTMR4', 'ABT1', 'PHF2P1', 'APOPT1', 'CCDC159', 'NCAPG2', 'ZZZ3', 'DAD1P1', 'CIT', 'SCARNA15', 'TAAR1', 'DLEU2L', 'ZNF768', 'TTC31', 'CCL8', 'TAS1R3', 'MS4A15', 'TMEM225', 'PTPRF', 'LINC01366', 'DTD2', 'C1QTNF9B-AS1', 'PDCD1', 'COL6A4P1', 'ACTA2', 'SPATA31A5', 'OR4K15', 'EIF4G3', 'SLURP1', 'GRSF1', 'SAP30BP', 'GCNT4', 'OR1E2', 'TIGD2', 'SLC6A17', 'CCDC148', 'LINC00936', 'LINC00238', 'MLF1', 'SCG5', 'ITGB3BP', 'PLBD2', 'ABCB7', 'NCR3LG1', 'CCL18', 'CHIA', 'SLC6A12', 'FHL5', 'GPR52', 'RAD1', 'CCDC85C', 'CWC27', 'NUBP1', 'SCARNA18', 'UQCRH', 'CCNC', 'ZC3H7A', 'CANT1', 'MTERF4', 'TGM5', 'FAM195B', 'LINC01020', 'TMBIM6', 'MME', 'IL17RB', 'EIF2AK4', 'SYT17', 'REG1B', 'PTGFR', 'RPN2', 'CAPS2', 'NR2F6', 'C2CD4D', 'LRP12', 'KRT12', 'KIAA1324L', 'CLMP', 'KLF2', 'ZNF286B', 'HGD', 'USP17L9P', 'PLCL1', 'REM1', 'TCF7L1', 'NAALAD2', 'AXIN2', 'CFD', 'HOMEZ', 'GNB1L', 'TH', 'FANCE', 'STAG1', 'UROC1', 'MOB3C', 'OR8B12', 'P2RY4', 'PEX5L', 'STARD7', 'EGOT', 'DNAJC30', 'SNAR-B2', 'TRIT1', 'TIMP3', 'HAND2-AS1', 'RHBDD2', 'COL10A1', 'FAT1', 'C1QTNF9B', 'DEPDC1', 'ONECUT3', 'ANKRD39', 'AK7', 'MARVELD3', 'YLPM1', 'DDX60L', 'GRIN2B', 'RELB', 'SMYD2', 'ANAPC4', 'TRADD', 'STAG3L2', 'OOEP', 'RACGAP1', 'LOC221122', 'GUCY2F', 'TPSB2', 'NXF2B', 'ACAP1', 'OR11H1', 'JADE1', 'MARK2', 'SUPT20HL1', 'RIMBP2', 'KRTAP9-8', 'ZNF578', 'PRDX1', 'IRF2BP1', 'ANTXR1', 'COL8A1', 'PLK5', 'HABP2', 'COQ10A', 'SORCS1', 'XIRP1', 'THBS3', 'NLGN1', 'BPGM', 'ZNF17', 'TPD52L2', 'FAM58A', 'ASIP', 'DVL2', 'ZNF548', 'OR5W2', 'MT1DP', 'DDX39A', 'FAM212A', 'PDIA3', 'DEAF1', 'ADGRG3', 'DEGS2', 'DNALI1', 'SULT2B1', 'SREBF2', 'MMRN1', 'PYCR1', 'ANK3', 'CHRAC1', 'RBX1', 'CLDN9', 'IMPA1', 'SERPINB5', 'PGAM2', 'UBE2N', 'TXNL1', 'RAD9A', 'ZAR1L', 'COL11A2', 'SCAF4', 'OR2B2', 'LETM1', 'GRPR', 'MLEC', 'GALNT11', 'FRMD7', 'RSU1P2', 'ZNF367', 'GRAMD4', 'NUBPL', 'HSPB8', 'MPZ', 'HES4', 'TTC16', 'SFMBT2', 'FLJ42393', 'AP5Z1', 'LRRC3', 'WAS', 'PRMT2', 'TUBA1B', 'TSSC4', 'C5ORF58', 'OR52D1', 'TMEM141', 'MAPK10', 'CXORF56', 'ICAM1', 'ARF4', 'BTBD9', 'C5ORF60', 'OR2M1P', 'GLT6D1', 'RPS9', 'RAB19', 'GYPE', 'ATG12', 'NYX', 'ZNRD1', 'TMF1', 'GAS7', 'C1ORF68', 'SYDE2', 'DDX56', 'EEF2K', 'KRT18P55', 'NDNL2', 'WWC2-AS2', 'RNU4ATAC', 'CSMD1', 'IKZF4', 'CFAP36', 'NDUFS8', 'CETP', 'AXL', 'CYTL1', 'CYP8B1', 'RXFP4', 'LCA5L', 'SHMT1', 'CDH24', 'LTBP2', 'PRR26', 'ATG4B', 'ZMAT1', 'SPECC1', 'ZNF326', 'FAS', 'ARL4C', 'SGPL1', 'SLK', 'C22ORF34', 'CHCHD3', 'CTSA', 'LILRA5', 'GCA', 'AKR1B10', 'CES2', 'FAM160A2', 'MRPL10', 'SLC35A1', 'DNAJA2', 'RBP5', 'ABCD4', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.285307333365043e-15 NRMSE: 6.823520482413049e-16 MAPE: 3.0856130420255705e-12 Pearson Correlation: 0.23102384692161393 Spearman Correlation: 0.2762154141572838 Coefficient of Determination: -5.498217472571925 RMSE: 2.400135932114059 NRMSE: 0.47185466364842116 MAPE: 1242.173512537549 Predictor: ElasticNet Pearson Correlation: 0.9001090456532674 Spearman Correlation: 0.8726124746174766 Coefficient of Determination: 0.7926327313931325 RMSE: 0.534933976305115 NRMSE: 0.0851778568047379 MAPE: 338.02465864753754 Pearson Correlation: 0.4239142653659816 Spearman Correlation: 0.4318333146298582 Coefficient of Determination: -0.01608835541537723 RMSE: 0.9490835698053485 NRMSE: 0.18658506070957978 MAPE: 322.13451288932464 Predictor: RandomForests Pearson Correlation: 0.7617663997510703 Spearman Correlation: 0.7198693241070527 Coefficient of Determination: 0.5751795209843585 RMSE: 0.7656544332137701 NRMSE: 0.12191561307184008 MAPE: 224.9522706768603 Pearson Correlation: 0.7350878717784938 Spearman Correlation: 0.4612252023092558 Coefficient of Determination: 0.5303903277972585 RMSE: 0.6452191289873571 NRMSE: 0.12684683855372098 MAPE: 147.07539917868394 Protein: CDH2 x_train_column_count: 474 x_train columns: ['C19ORF12', 'CHTOP', 'DUPD1', 'MT1B', 'SNORD22', 'TMSB4XP8', 'ACOX2', 'TMEM80', 'CCL26', 'LCE1F', 'XPNPEP1', 'CRX', 'NOL6', 'CMTM8', 'ADAM33', 'ABCA8', 'CLPP', 'ZC3H13', 'IL27RA', 'IL1F10', 'SLCO2A1', 'NUP62CL', 'TCP10L', 'KIFC2', 'GPRC5D', 'RNF44', 'CCDC105', 'ZNF444', 'ATP2B2', 'MOBP', 'PSAT1', 'EED', 'VPS26B', 'AACSP1', 'CCRL2', 'RASSF9', 'DUSP28', 'FADS2', 'TAF1D', 'ZKSCAN3', 'C5AR1', 'MPLKIP', 'RFWD3', 'PTRH2', 'OR52B4', 'SLC25A47', 'ANKRD29', 'PPP2R3A', 'KIAA0513', 'EPS15', 'GFPT2', 'COTL1', 'SRSF4', 'MAGEF1', 'SEMA4B', 'TECPR1', 'REXO1', 'ITM2C', 'OR1I1', 'ZIK1', 'PCM1', 'UBL3', 'MEDAG', 'TTYH2', 'MTCH2', 'ANTXR1', 'KCNK12', 'ZNF527', 'ZNF764', 'SLC25A11', 'MSR1', 'FUBP3', 'TLN2', 'UGT1A4', 'ASUN', 'LOC494141', 'MTG1', 'CLEC14A', 'SNX1', 'PRX', 'CHMP1A', 'TRPM7', 'PARP9', 'DCAF13', 'IL18R1', 'KRTAP13-1', 'SAR1A', 'GLT8D2', 'GHRHR', 'CHST6', 'SLC35G2', 'ADIPOQ', 'IQCF6', 'ZNF649', 'TGFBR2', 'PDCD2', 'ITGB7', 'ARG1', 'FSHB', 'SETD8', 'C7ORF72', 'FOXD4L1', 'SSH2', 'CASP6', 'ZNF648', 'OR1S2', 'SLC1A7', 'FUT6', 'PTGER2', 'ACP6', 'C6ORF141', 'ZBTB24', 'AGPAT3', 'GRM7', 'SEMA3E', 'NR6A1', 'AFTPH', 'OR5L1', 'ST3GAL2', 'MED19', 'IDH3G', 'MAP2K3', 'TMEM102', 'KIAA0930', 'SP3', 'ANKLE2', 'KIAA0754', 'RAP2A', 'RBMXL2', 'SNRPD3', 'LINC00847', 'OR10Z1', 'LINC01550', 'CLEC17A', 'FAM179B', 'STAP1', 'TXNDC16', 'PTCHD3', 'RPIA', 'CFAP20', 'TTC17', 'GFAP', 'WHAMM', 'OR2T2', 'CRYGC', 'SRCAP', 'ADGRG4', 'SLC29A4', 'CTSF', 'MUM1L1', 'CETP', 'SAA4', 'ELAC1', 'OR5K2', 'SPC25', 'PDX1', 'ECI2', 'MBOAT7', 'C5ORF51', 'MMRN2', 'OSBPL5', 'CCDC132', 'CAB39L', 'CCNI', 'BTBD10', 'PLA2G5', 'MGAT4A', 'ISG15', 'SAV1', 'PFDN6', 'IRX1', 'GZMH', 'MUC12', 'CYR61', 'R3HDML', 'ZMPSTE24', 'MFSD6L', 'RBM25', 'OTOL1', 'CRY2', 'CITED4', 'SNORD15A', 'UMODL1', 'SOX10', 'AGAP2', 'KRT25', 'FADS1', 'GSK3B', 'DYNC1H1', 'ACSL4', 'PHF11', 'GJB6', 'ABI1', 'BAAT', 'RTKN', 'USP32P2', 'LIMK2', 'C22ORF42', 'DFNA5', 'SCD5', 'RINL', 'APOB', 'SLED1', 'DNASE2B', 'RBM38', 'HELZ', 'CLTCL1', 'FBXO8', 'AAAS', 'OR4C11', 'WWP2', 'CRB3', 'ELMOD1', 'NTM', 'TDP2', 'FNDC5', 'NPNT', 'UBA3', 'RAD9B', 'RPS23', 'DHX29', 'CD248', 'ATF5', 'SNX12', 'CDH13', 'TMEM251', 'TDO2', 'DKK1', 'FER1L5', 'BRMS1L', 'MYH7', 'WBP1', 'HNRNPAB', 'C12ORF54', 'NKAIN4', 'TYW5', 'LRRC41', 'C8ORF34', 'ICOSLG', 'GFM2', 'SPDYE3', 'ZNF589', 'GLTSCR2', 'CT47A7', 'DYNC1I1', 'STK3', 'TTC30A', 'RARS', 'JSRP1', 'RIPK1', 'PXDC1', 'ZRANB3', 'ZBTB48', 'GEMIN8', 'CACTIN', 'RPE', 'SPATA9', 'TSHZ1', 'RGPD8', 'RCHY1', 'MYSM1', 'HOXB13', 'ERP29', 'NTNG1', 'SLC44A5', 'FEZ1', 'ADGRG5', 'PPP1R12B', 'CRACR2B', 'CNDP2', 'PRH2', 'RANBP3L', 'FLJ16779', 'PRR26', 'OR2V2', 'ATP6V1G3', 'FLNC', 'TMEM169', 'CCDC47', 'GPR35', 'TCHHL1', 'SAMD12', 'RBMXL3', 'SCML2', 'MGST3', 'LCE1B', 'TIMM17B', 'AARS2', 'RAPGEF3', 'ATXN1', 'ZBTB32', 'TCP10L2', 'HIST1H4K', 'ANKS3', 'LSM3', 'FAM20A', 'CCDC88A', 'GPC3', 'CNIH3', 'RGS19', 'DNAJA1', 'RPL8', 'SLC25A46', 'PREB', 'DDR1', 'MT3', 'PPP2CA', 'RASSF10', 'SBF1', 'KLHL23', 'LANCL3', 'FAM69B', 'HBM', 'CENPV', 'KHDRBS1', 'RBSN', 'GGTLC2', 'LOC391003', 'KRTAP13-2', 'ST7-AS1', 'TMED5', 'PSMC1', 'THBS4', 'SYNJ1', 'GRN', 'WDR5B', 'SLC22A16', 'PRUNE2', 'CCDC74A', 'PCDHB9', 'OR4C15', 'CLK3', 'GSTA1', 'STKLD1', 'CCDC103', 'PVALB', 'ZNF300', 'BAG2', 'NINJ1', 'FAM161B', 'DNAH3', 'GCM1', 'C17ORF99', 'SP4', 'WNT8B', 'ATP5EP2', 'CDC42BPG', 'WDR38', 'SDHB', 'ZNF526', 'IL25', 'SEMA6A', 'ACOT7', 'SAPCD2', 'PYGM', 'CST9L', 'PGA5', 'UCP2', 'LOC401052', 'SIRT3', 'GNAI3', 'MAN2A1', 'KIF7', 'AP3S1', 'PTPRS', 'TSPAN19', 'PLOD3', 'H2AFJ', 'UVRAG', 'STH', 'FAM216B', 'CRAMP1L', 'BTBD6', 'MN1', 'INSL3', 'TATDN3', 'MYL7', 'RASSF5', 'DRD2', 'RPL17', 'TRIP10', 'CDO1', 'CBLB', 'ARHGAP12', 'RFNG', 'BCL7A', 'SUSD6', 'ASB16', 'CRTC2', 'NME4', 'GTF2H3', 'RPL32P3', 'ANP32E', 'HAR1B', 'CNR2', 'SCUBE2', 'IFNK', 'HMBS', 'UBE3C', 'ZNF687', 'ADAM28', 'ITGA9', 'OR9A4', 'VPS37D', 'TMEM45B', 'PLIN5', 'ERMARD', 'SETX', 'CELF6', 'CYP2C19', 'ZNF304', 'TMEM74B', 'LCNL1', 'SLC35C1', 'LINC00111', 'KLHL15', 'LETM2', 'AFAP1-AS1', 'KIR2DL1', 'NGLY1', 'ZC3H10', 'KHK', 'CREBRF', 'WNT9A', 'BPIFA4P', 'ENC1', 'RPS6KA3', 'TUBB7P', 'CA9', 'GRM5', 'TAF5', 'EXOSC7', 'BCHE', 'OR5T1', 'CCR5', 'OR9Q2', 'OR5AR1', 'NADK2', 'FAM134C', 'PDILT', 'TRPC6', 'ARL17A', 'LHB', 'IGF2', 'DNAJC5', 'OR2M5', 'UBXN11', 'BHLHE40', 'FAM90A1', 'TLN1', 'ROS1', 'DMGDH', 'GPR158', 'SRGAP2', 'PGM2', 'SECISBP2', 'TRIM34', 'LOC646214', 'GREB1L', 'IQCF5', 'TTN', 'NETO1', 'TMEM107', 'RPL23AP64', 'TRIM32', 'PRSS55', 'OR5D16', 'TEX14', 'POLR2L', 'UGT8', 'PCDHA2', 'CMSS1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.9477596518686341 Spearman Correlation: 0.9276649476038508 Coefficient of Determination: 0.8982481046166295 RMSE: 0.12160947078931648 NRMSE: 0.04406459554653109 MAPE: 957.6714788954728 Pearson Correlation: 0.04044348657624618 Spearman Correlation: 0.03145924512774474 Coefficient of Determination: -1.4247078756748117e+27 RMSE: 12530626646402.146 NRMSE: 6602433581892.505 MAPE: 927814580684242.8 Predictor: ElasticNet Pearson Correlation: 0.6863426083192254 Spearman Correlation: 0.6710172868374646 Coefficient of Determination: 0.4136300669024263 RMSE: 0.29193219402417586 NRMSE: 0.10578019929856362 MAPE: 950.7416200510991 Pearson Correlation: -0.032503741107140695 Spearman Correlation: -0.004172121846905822 Coefficient of Determination: -0.2116796634455298 RMSE: 0.3654296543675557 NRMSE: 0.1925462381012265 MAPE: 2051.3807720855466 Predictor: RandomForests Pearson Correlation: 0.5583614084644034 Spearman Correlation: 0.498022146472746 Coefficient of Determination: 0.19384881322563619 RMSE: 0.34229802511459556 NRMSE: 0.12403001127422117 MAPE: 799.9731341441465 Pearson Correlation: -0.04266059201788447 Spearman Correlation: -0.003194553548049228 Coefficient of Determination: -0.07733229351007664 RMSE: 0.3445757553321705 NRMSE: 0.18155824147584174 MAPE: 1841.513140346071 Protein: CDH3 x_train_column_count: 75 x_train columns: ['TMEM180', 'GOLGA7', 'SLC25A52', 'TRAM1L1', 'ZBTB17', 'LRRC10B', 'LINC00483', 'CBX2', 'OSBP2', 'OXCT1', 'PLSCR4', 'HSPBAP1', 'RND3', 'HIST1H4G', 'LETM2', 'BLNK', 'GOLGA8F', 'UBR2', 'PRAMEF5', 'CKS2', 'C22ORF24', 'MTG1', 'SHMT1', 'NAPEPLD', 'SEC14L4', 'WSCD1', 'DAAM1', 'CBX4', 'DAW1', 'ILF3', 'SREK1IP1', 'SNORA45B', 'AHCYL2', 'GPATCH4', 'RNF145', 'UBAP2L', 'ANAPC2', 'IRGM', 'TAPBP', 'TEX43', 'SLC4A10', 'TTC41P', 'DHX29', 'SLC39A14', 'ADCY10P1', 'TCEAL1', 'PHF2', 'IP6K1', 'NUAK1', 'ZDHHC1', 'STRIP1', 'USP35', 'HELQ', 'TTC16', 'MED10', 'FAM26F', 'BEND3P3', 'ENTHD2', 'NDUFV2', 'ZNF800', 'PROL1', 'SHISA7', 'SLCO6A1', 'MYOCD', 'VAMP2', 'SERTAD4-AS1', 'PDE6G', 'MED12', 'CYB561A3', 'PPCDC', 'TBCCD1', 'BCAP29', 'TMEM37', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.5247295097871129 Spearman Correlation: 0.5407077665271383 Coefficient of Determination: 0.275341058441424 RMSE: 0.18090377773831864 NRMSE: 0.1269179559818703 MAPE: 646.5207139165198 Pearson Correlation: 0.1854658506496919 Spearman Correlation: 0.19539146373396177 Coefficient of Determination: -0.11189205155104176 RMSE: 0.19858517865737596 NRMSE: 0.17273233071870708 MAPE: 256.5208542710302 Predictor: ElasticNet Pearson Correlation: 0.4599284291782828 Spearman Correlation: 0.4961290797128652 Coefficient of Determination: 0.19472771177012793 RMSE: 0.19070065533544794 NRMSE: 0.13379122140052194 MAPE: 410.393858255194 Pearson Correlation: 0.2867587867524591 Spearman Correlation: 0.2800807990124565 Coefficient of Determination: 0.07453768336533906 RMSE: 0.18117358953031165 NRMSE: 0.15758747251847197 MAPE: 168.3231948846225 Predictor: RandomForests Pearson Correlation: 0.5088617217598316 Spearman Correlation: 0.5562161072683031 Coefficient of Determination: 0.22934394853396034 RMSE: 0.1865568091357117 NRMSE: 0.13088399361263942 MAPE: 508.9565454472363 Pearson Correlation: 0.30859619640893304 Spearman Correlation: 0.28934275988478664 Coefficient of Determination: 0.08701187620652473 RMSE: 0.1799484388352952 NRMSE: 0.15652181829159256 MAPE: 189.85362598952295 Protein: PTEN x_train_column_count: 886 x_train columns: ['FAM223B', 'NME2P1', 'ACSL4', 'PMP22', 'HLTF', 'ZMAT3', 'LRRC42', 'GUCY1B3', 'ANKRD37', 'FKTN', 'IL17D', 'MYLK2', 'RD3', 'S100A1', 'GGT3P', 'TNNT3', 'SMOC2', 'S100A9', 'UBE2W', 'BLK', 'LYPLA2', 'SRI', 'PCMTD1', 'OR8D2', 'ZNF705D', 'ZC2HC1B', 'KRBOX4', 'PNMT', 'KRTAP19-3', 'GAGE2B', 'MARCKS', 'NACC2', 'ZNF140', 'GALNT2', 'ABCB8', 'MYL4', 'FOXR2', 'OR51G1', 'SLAMF1', 'CAMK2B', 'MMP10', 'ROBO3', 'NUDT18', 'TMED7', 'TNFAIP8', 'SBNO1', 'RGP1', 'MX2', 'ZNF252P', 'MFAP3L', 'BAGE', 'CDKN3', 'LACC1', 'C10ORF71', 'HSF2BP', 'LINC01587', 'FSIP1', 'PTP4A1', 'PSMC1', 'ACD', 'DNPEP', 'CCDC176', 'PANK3', 'DRAIC', 'OR51F1', 'GJA5', 'TCAF2', 'CNN2', 'KRTAP9-8', 'DMRTB1', 'SNRPD2', 'ATE1', 'RMST', 'MCM3AP-AS1', 'ODF3B', 'RPL23AP64', 'SLC22A2', 'POU2F3', 'GRPEL2', 'EDIL3', 'TP53INP2', 'NNAT', 'ANKRA2', 'DOCK11', 'CCDC185', 'XKR7', 'FAM120AOS', 'ALS2CL', 'EN1', 'ADCY10P1', 'ZSCAN12', 'SNHG20', 'PAEP', 'GPX6', 'SKIDA1', 'DDX56', 'PAX2', 'SMIM11', 'OSBPL7', 'ARPP21', 'ADGRG4', 'RNASEH2C', 'ZNF717', 'PCDHGA10', 'RECQL4', 'GUCY1B2', 'PHKB', 'TSPAN14', 'RSU1', 'REXO1L1P', 'LPCAT3', 'SNORA53', 'PROC', 'OSGIN2', 'ELK4', 'NKAPL', 'SLC6A1', 'NBEAL1', 'CNTFR-AS1', 'HIP1R', 'STOM', 'ZNF668', 'CMTM1', 'LINC00596', 'NLGN4X', 'C1ORF174', 'PGP', 'LBHD1', 'RABGGTA', 'VPS37B', 'XKR3', 'ANO8', 'MFF', 'CALY', 'SMAD1', 'SLC7A5P1', 'AZIN1', 'SYTL3', 'SLC25A51', 'NARS', 'OR6B1', 'MATR3', 'SFTPC', 'FAM60A', 'ZSCAN29', 'FAM138E', 'STUB1', 'FBXL12', 'PSMD5', 'LRRC14', 'VWA5B1', 'LIMK1', 'SUSD2', 'OR6C1', 'KLHL20', 'ARG1', 'CLMP', 'GOLGA8G', 'METTL23', 'OR51B2', 'GLCCI1', 'FAM63A', 'RNFT2', 'VLDLR', 'RNF121', 'ZFAND4', 'SELPLG', 'SEZ6L2', 'ZNF609', 'KCNJ1', 'AEBP2', 'TMEM132B', 'KRT27', 'OR1L8', 'FAM26E', 'ZNF491', 'CFAP43', 'C8ORF46', 'HPRT1', 'ADH7', 'SIPA1L1', 'TMCO5A', 'SLC35A5', 'FBXO41', 'NALCN', 'NAIP', 'TTLL10', 'ZNF137P', 'ZNF182', 'IL17A', 'NEFM', 'HIF1A', 'HACD1', 'LRRTM4', 'KLHL3', 'ELOVL1', 'IL2', 'DAAM2', 'IRF2BPL', 'ZC3H14', 'MLH3', 'TMPRSS5', 'IGSF8', 'KCNE5', 'MAN2B2', 'ADAMTS5', 'SDC3', 'UGT1A6', 'TRAPPC11', 'KIAA1143', 'ANKHD1-EIF4EBP3', 'QTRTD1', 'RSRC1', 'EML6', 'LINC00479', 'PLEKHA8', 'LRTOMT', 'GABRB2', 'MAT2B', 'DOCK10', 'MPLKIP', 'POU3F2', 'EWSAT1', 'SMCO2', 'ZNF33A', 'ZBED9', 'RAB40A', 'GRM5', 'CHAMP1', 'MFAP5', 'ZFYVE28', 'FOXO3B', 'MRPL2', 'BIRC3', 'MRPL9', 'AGA', 'CCR5', 'TBP', 'ARHGAP5-AS1', 'ZPR1', 'TEX13B', 'B9D2', 'GNG13', 'C1ORF168', 'OTOL1', 'NDUFB2-AS1', 'FAM74A1', 'NOTCH3', 'KGFLP1', 'ELK3', 'PITPNM3', 'OR5AR1', 'SNORA54', 'FBXL6', 'EPB41L4A', 'SAMD5', 'MEIS3P1', 'ROBO4', 'SNAP91', 'TDG', 'ZNF641', 'NFIB', 'KCNA2', 'PSG2', 'SDHAF3', 'SACS', 'PAH', 'PIAS3', 'NME1', 'WFDC13', 'SUPT4H1', 'EGFL6', 'SYCE3', 'CACTIN', 'KLF12', 'MDFI', 'OR3A1', 'PARPBP', 'UGT2B7', 'CYP4F8', 'C8ORF74', 'TMEM63A', 'LINC00917', 'ZCCHC14', 'ZNF484', 'MICU3', 'ZNF595', 'LUZP1', 'RPS10', 'KRT26', 'GLYATL1', 'DOCK7', 'HSFX2', 'SFTA3', 'OR5M1', 'PACSIN2', 'CCDC85C', 'APPL2', 'C1ORF226', 'FIRRE', 'GCNT4', 'PIGA', 'CATSPER3', 'LINC01553', 'ZNF77', 'TMEM52B', 'TCHP', 'CHP1', 'LAMA4', 'DEFB131', 'STRADB', 'ITGB5', 'EIF3A', 'BTBD10', 'DTWD2', 'VPS13D', 'TBX19', 'PRDM4', 'RP9P', 'VPS4A', 'TMED10', 'RFK', 'OSTC', 'RPRM', 'FBXW10', 'TMEM205', 'LINGO2', 'ZC3H8', 'USP51', 'NUDT8', 'C1D', 'ABCC13', 'FHL5', 'SLC44A4', 'SYT8', 'DUSP23', 'TSHZ1', 'LINC00092', 'TCAIM', 'FAR2', 'LSMEM2', 'SMARCA4', 'TMEM185A', 'MBNL1', 'XRCC5', 'ZNF75D', 'PRUNE', 'COMMD4', 'PSMG3-AS1', 'FFAR4', 'ZNF763', 'MCM4', 'SOD2', 'OR13A1', 'MXD4', 'ZNF674', 'APOA4', 'NME9', 'TCEAL1', 'LCE1C', 'LNPEP', 'TIMMDC1', 'PGF', 'UNC119B', 'USP27X', 'HAP1', 'FLJ16779', 'SH3BGR', 'SUGCT', 'CTAGE1', 'TBC1D28', 'GPR182', 'NUSAP1', 'MAP3K11', 'XCR1', 'ADIG', 'FERMT3', 'EPDR1', 'SIGLEC9', 'PTX4', 'LINC00961', 'RRAGD', 'UPK3B', 'CST4', 'PTENP1', 'RTN1', 'OR2A12', 'FAM76B', 'TIAM2', 'C4ORF48', 'FBN2', 'PPAPDC1B', 'CCDC67', 'HACD2', 'GML', 'PSMD12', 'FRMD3', 'C20ORF194', 'VWA5B2', 'IL22RA1', 'STAT2', 'RGS9', 'SYT1', 'PDCD6', 'GAGE12D', 'LINC00314', 'ARHGEF19', 'C4ORF22', 'C5ORF52', 'MYNN', 'OR11H12', 'KPTN', 'OR4K17', 'GJD3', 'GMCL1', 'IMMT', 'CCIN', 'LOC100272216', 'RSC1A1', 'CCDC7', 'NDUFV1', 'WDFY1', 'POLB', 'SULT2B1', 'PAX8', 'GMFB', 'C19ORF54', 'RNF111', 'TRIM16', 'SLC14A2', 'ZNF486', 'INSL5', 'SPACA3', 'IGF1', 'ANKHD1', 'FBXL14', 'MBD3L2', 'SPNS2', 'FZD6', 'MIDN', 'MED11', 'ABHD13', 'L2HGDH', 'RSPO1', 'H2BFWT', 'PCDHA9', 'ZIC1', 'HMOX1', 'KIAA1107', 'DCLRE1A', 'LOC100129034', 'OMP', 'FBXL19', 'GALNT6', 'WDR49', 'GPR173', 'NIPA2', 'GHRHR', 'MUC4', 'ACTR1B', 'COLQ', 'RBP3', 'SLC45A3', 'KIF26A', 'CNOT4', 'SLC12A9', 'IMPA1', 'BTNL9', 'LINC01011', 'HCRT', 'RASEF', 'GOLM1', 'SCRN1', 'FAM196B', 'MMEL1', 'ANKRD53', 'THEM6', 'ZYX', 'NCOR1P1', 'ERCC2', 'TMEM206', 'DDIAS', 'ZNF131', 'ADAM29', 'ARHGEF18', 'DAPK2', 'ITPK1', 'WNT8B', 'PDE11A', 'CCNB3', 'NAB1', 'SLC7A2', 'CBWD2', 'GPR162', 'ZEB1-AS1', 'STAC2', 'SSH2', 'GPRASP2', 'AFP', 'LIN7C', 'HFE2', 'USP4', 'UEVLD', 'HHLA3', 'GSK3B', 'FAF1', 'PPIA', 'ATRAID', 'KLHL30', 'LMOD2', 'TMEM14B', 'SETDB2', 'NLRC3', 'RPL13AP17', 'OR5T2', 'PRORSD1P', 'ARRDC5', 'FNDC4', 'SLC25A2', 'NDRG2', 'ACBD6', 'SCRN3', 'BCYRN1', 'SHROOM4', 'TPRN', 'NID2', 'PRB1', 'NUDT13', 'SNAR-I', 'RAB9A', 'SLC22A18AS', 'ALOX5', 'PAX6', 'ZNF766', 'MFSD5', 'WFDC2', 'DOCK9', 'PIGU', 'PTPN12', 'TRPV1', 'GANC', 'SEMA3G', 'TMEM184A', 'PRR22', 'CXORF40B', 'GP9', 'SUFU', 'CDKN1A', 'VOPP1', 'THPO', 'PABPC1L2B', 'PLXNB1', 'CXADRP2', 'MRPL21', 'GCSAM', 'GDPD5', 'APOA5', 'CRISP1', 'GSDMA', 'OR2M7', 'BEX1', 'C8ORF33', 'INTS4P2', 'ZNF180', 'USP47', 'LPAL2', 'EIF2B5', 'LINC00710', 'CADM2', 'PRLR', 'RTN4R', 'SF3A3', 'C1QTNF6', 'TECR', 'BRDT', 'MSTO2P', 'RNASE8', 'CIC', 'GCM2', 'KRTAP1-5', 'ATAD2B', 'MYSM1', 'MYOC', 'SMCR8', 'CKLF', 'C3ORF52', 'PRSS42', 'POTEC', 'ANKRD30BL', 'PCSK1', 'SMPD3', 'CREBZF', 'FGF14', 'ANKRD26P1', 'RFXAP', 'NEURL4', 'HNF1A', 'WDR1', 'TAF7L', 'CYP1A2', 'ISCA1P1', 'SNX7', 'NPY1R', 'AKR1E2', 'CDC40', 'ANKRD22', 'ITPKA', 'HAUS7', 'TRAK2', 'SNORA14A', 'ARHGAP19', 'RILPL2', 'TSPAN8', 'PCDHA7', 'CMSS1', 'NDUFAF2', 'BCAS1', 'GARS', 'RPL26L1', 'SMARCAD1', 'TSC22D4', 'TCP11', 'MRPL16', 'ZEB1', 'STAG3L3', 'MYT1', 'MYOM3', 'ZNF565', 'RCAN2', 'GNL3', 'PAPOLA', 'NFE2L3P2', 'ABCC5', 'PRPS1L1', 'HILPDA', 'ATR', 'ACVR1', 'BCL2', 'MAML1', 'FAF2', 'ARHGEF39', 'DNM1P46', 'LOC100287704', 'PAK4', 'ANGPT1', 'N4BP3', 'POP1', 'ARHGAP22', 'ECM2', 'SNX8', 'TCTEX1D1', 'DLEU2L', 'PKP4', 'LRRC27', 'RAB6C', 'ASAP3', 'PLLP', 'CBLN3', 'PCM1', 'POLR3D', 'DBF4B', 'DST', 'RHPN1', 'TGM5', 'SNORA80A', 'CUBN', 'KLHL33', 'NGLY1', 'CDH16', 'TCEA2', 'RRN3P2', 'AMDHD2', 'CD5', 'CYP24A1', 'CHD7', 'ZNF791', 'DCANP1', 'SCIMP', 'GALNS', 'ZBTB16', 'PSG7', 'TBC1D24', 'NEFL', 'BARD1', 'OR2W3', 'MCM6', 'SLC16A6', 'BAAT', 'RALB', 'MCTS2P', 'HAO1', 'BTBD18', 'GLRX2', 'PDSS1', 'ADAD2', 'VPRBP', 'RNF207', 'TNNC2', 'FAM212A', 'OR5K2', 'SPANXN4', 'PLD4', 'PPAP2B', 'PRAMEF9', 'NDUFB7', 'TRPC4AP', 'GSG2', 'NUDT7', 'SPCS2P4', 'MFSD10', 'SLC18A3', 'ECHDC1', 'SERPINA5', 'TRIM13', 'PBDC1', 'SLC6A4', 'LYPD8', 'PRKCH', 'ADCY5', 'NBEAP1', 'FDX1', 'DCTN4', 'WBSCR27', 'RARRES2', 'CDC14C', 'NUCKS1', 'ALDH1L1', 'FLJ23867', 'OR4C3', 'MDM4', 'RGL4', 'PPAPDC2', 'MOGAT1', 'ADGRB1', 'PLA2G12A', 'CCDC141', 'DUXA', 'TRIM14', 'ATG16L1', 'OR4A47', 'KCTD2', 'ZP2', 'SLC9A3', 'LINC00482', 'YKT6', 'AQP7P1', 'RRM1', 'DKFZP779M0652', 'TCF20', 'TMUB2', 'GJA4', 'SDPR', 'FAM71F1', 'TNRC18', 'GOLT1B', 'CES4A', 'DMBT1', 'MAFA', 'NEURL3', 'CACNA1C', 'PES1', 'DNAJC18', 'DNASE1', 'SPICE1', 'EMP1', 'TMED7-TICAM2', 'MS4A14', 'HCN2', 'NR1H4', 'PDDC1', 'NDUFA5', 'NOS1AP', 'MIMT1', 'RALY', 'APOF', 'NME6', 'TP73', 'PGGT1B', 'CTSV', 'EPB41L4A-AS1', 'C17ORF62', 'TNNI3', 'ASB10', 'UGT2B10', 'ATXN3L', 'SPINK1', 'SYNDIG1', 'SNORD115-7', 'MBD3L5', 'KARS', 'NT5C2', 'MINA', 'TMEM39B', 'MTG1', 'KIF20B', 'RSPH4A', 'ARID2', 'OSBPL1A', 'UCA1', 'HEATR1', 'MESDC1', 'ZG16', 'OR6P1', 'PSME4', 'ARRB1', 'COLEC10', 'YAF2', 'TIMM10', 'TMEM176B', 'BRMS1', 'RNF8', 'UGT8', 'FLG', 'CHMP4A', 'CHD5', 'SLC37A3', 'TBC1D10B', 'GUCY2GP', 'NBR1', 'MNS1', 'TPM4', 'ITLN2', 'RGS17', 'SEMA6A', 'SERF1A', 'IGSF1', 'GDI2', 'C1QTNF8', 'CD14', 'TAS2R38', 'HOXA4', 'MRPS10', 'ALDH8A1', 'BST2', 'RPL22L1', 'LINC00896', 'FAM83H', 'LOC440173', 'ADAM5', 'TMPRSS11D', 'SYK', 'C5ORF38', 'TP73-AS1', 'SCRT2', 'CNBD1', 'FAM222A', 'ASB11', 'NPRL3', 'FAM96B', 'EP400', 'ZNF121', 'PELI1', 'MYEOV2', 'OGFOD3', 'NUDT3', 'BMPR1A', 'CC2D2B', 'CDK1', 'CNDP1', 'HAS2-AS1', 'HOXB9', 'MFSD1', 'KIAA0087', 'MEFV', 'CLK3', 'OR1G1', 'TBPL1', 'A1BG', 'SLC6A20', 'SLC9A8', 'ZNF696', 'ACTL7B', 'PIGK', 'NEK4', 'EDDM3B', 'E2F5', 'SNHG10', 'CASP2', 'ZMIZ1-AS1', 'DYNC1I2', 'MTHFD2L', 'LINC00938', 'LOC730668', 'DDX11L2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.547254688422069e-15 NRMSE: 3.982885917320098e-16 MAPE: 6.014519427174184e-12 Pearson Correlation: 0.10028052131711532 Spearman Correlation: 0.07666679135650072 Coefficient of Determination: -3.334659401321802 RMSE: 0.9805281089077365 NRMSE: 0.23443028472905286 MAPE: 457.72732745685687 Predictor: ElasticNet Pearson Correlation: 0.8496283685625956 Spearman Correlation: 0.8219623649150405 Coefficient of Determination: 0.6809023544930486 RMSE: 0.3554803595405207 NRMSE: 0.05558288789625841 MAPE: 426.84314692167754 Pearson Correlation: 0.307430356196676 Spearman Correlation: 0.2971383683088318 Coefficient of Determination: -0.08946945958620445 RMSE: 0.49157534114766444 NRMSE: 0.11752865230900982 MAPE: 201.11352827562828 Predictor: RandomForests Pearson Correlation: 0.6180018266776431 Spearman Correlation: 0.5298190333283501 Coefficient of Determination: 0.30469273755380377 RMSE: 0.5247376109493327 NRMSE: 0.08204794166981982 MAPE: 288.9877138843263 Pearson Correlation: 0.4106083080450406 Spearman Correlation: 0.38605718275788975 Coefficient of Determination: 0.15352274036346358 RMSE: 0.43330151425599855 NRMSE: 0.10359621150863066 MAPE: 105.57114394571165 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['ZNF17', 'PITPNM2', 'TPP2', 'WFDC10B', 'WFDC3', 'LIF', 'LYPD3', 'SPACA3', 'CRP', 'PFKP', 'ZNF213', 'RPS9', 'CTNNBIP1', 'SART1', 'DIMT1', 'BAK1', 'CSTA', 'MAGED2', 'UPP1', 'CMTM5', 'GALT', 'RPSAP52', 'ABCC11', 'TRAF7', 'GPR156', 'LOC399815', 'PDZD8', 'FBXO38', 'ACTR3C', 'LINC01020', 'SHROOM4', 'GSPT1', 'DHX37', 'WDR87', 'FBXL12', 'GPR101', 'DNAH12', 'SDHAF1', 'UBR5', 'HOXA13', 'TONSL', 'OR2M2', 'PLEKHG6', 'LINC00950', 'SYCP1', 'DDX19B', 'ADAMTS18', 'SCYL3', 'CMTR2', 'INS-IGF2', 'TGM4', 'HFM1', 'SLC39A3', 'CASKIN1', 'LILRA3', 'TMEM37', 'TEX9', 'TAF4', 'MTUS1', 'ANKDD1A', 'ONECUT2', 'ABCC6P1', 'RPL13P5', 'ASIP', 'OTOP2', 'C2ORF81', 'TMPRSS6', 'PRB1', 'ATG10', 'ZNF700', 'DEFB109P1', 'COL5A3', 'INPP5B', 'DMP1', 'NFKB1', 'BLZF1', 'HIPK3', 'MST1P2', 'ZNF618', 'RGPD1', 'CYLC1', 'CLDN19', 'CRYM', 'TSR1', 'LRRC75B', 'ATG9B', 'SLC43A2', 'BIRC5', 'TMEM173', 'WBP11P1', 'INPP5E', 'CCDC101', 'LRRC8C', 'C1QTNF8', 'RGS14', 'PEA15', 'GGTLC2', 'GPR18', 'FAM160B2', 'SIX2', 'FASTKD2', 'SEMA3F', 'SUV39H2', 'RNF185', 'FOPNL', 'PGLS', 'GATAD2B', 'MANBA', 'DENND2C', 'TNFSF13B', 'RPL7A', 'ZBP1', 'MAGEC1', 'ACMSD', 'LARS', 'ACOT4', 'SDK2', 'OSBP', 'SKIL', 'DBNDD1', 'ARRDC4', 'FLJ23867', 'FGD3', 'RTN3', 'BRSK1', 'GNL1', 'FAM131C', 'LRRN2', 'TRPM7', 'UBAP2L', 'NKX6-3', 'VAPB', 'UGT2A1', 'PDCD6', 'HMBS', 'PSG10P', 'CPNE9', 'APBA3', 'ANXA10', 'RABGGTB', 'KXD1', 'LAIR2', 'NMD3', 'RTP5', 'PGAM4', 'CNTNAP4', 'GSTTP1', 'CREB5', 'NME5', 'KCTD11', 'STAU2', 'S100A6', 'SLC47A1', 'AXIN1', 'LINC00304', 'OR4X2', 'NFE2L3P2', 'NFKB2', 'BAGE', 'CSNK1G3', 'NOL9', 'C3P1', 'CYP3A4', 'KIF21A', 'LEAP2', 'KRT81', 'PRPS1L1', 'PRAMEF2', 'PPARA', 'C1ORF64', 'ITGAL', 'MYLK2', 'PEX26', 'GUCY1B3', 'OXTR', 'ASAP3', 'SORT1', 'MIR7-3HG', 'GDF3', 'DDTL', 'CENPC', 'RNASE13', 'ZBED8', 'ZNF333', 'LY6G6D', 'METAP2', 'SYT5', 'OSBPL10', 'C1QA', 'ZNF492', 'OR12D2', 'PRKY', 'TMCO4', 'CCNA2', 'CAMK1D', 'NINJ1', 'ICAM3', 'BPIFB4', 'NCOA5', 'RNF222', 'PPP1R3A', 'CYSLTR2', 'EPHB6', 'RPS3A', 'STOX1', 'MEN1', 'XPNPEP1', 'PCLO', 'SNHG20', 'NSDHL', 'KRTAP9-4', 'GOLT1B', 'MTHFD2L', 'PTBP1', 'SCX', 'OR1L4', 'PDC', 'NRADDP', 'TMEM45A', 'TMEM105', 'SAMD14', 'ADGRG5', 'TMPRSS11B', 'C11ORF53', 'APOA1', 'RPS2', 'TRAM1', 'LINC00957', 'ELMOD1', 'HMGCS2', 'TLR1', 'TNFRSF17', 'DNAJB9', 'TBXAS1', 'SPON2', 'CBLL1', 'PRDX2', 'C7ORF61', 'TAAR9', 'HSPA7', 'OR4D9', 'MPND', 'SCTR', 'HSD3B2', 'EXOSC3', 'ACHE', 'ZFP42', 'OTUD5', 'COMMD5', 'PTPRK', 'LYRM1', 'UBE2W', 'PPP6R2', 'EGFR', 'TM4SF4', 'DCTPP1', 'MACROD1', 'ZSCAN29', 'SCNN1B', 'PHF1', 'MAML1', 'TMEM220', 'UBE2U', 'LOC100132831', 'C11ORF68', 'NOP14', 'ST6GALNAC6', 'BRINP3', 'MIS18A', 'DROSHA', 'CPE', 'GSS', 'PLCB4', 'TOX3', 'CLEC4M', 'LRP2', 'C10ORF55', 'BCL6', 'MED25', 'RIOK2', 'CNTRL', 'PPIB', 'KRTAP10-10', 'CPOX', 'DNAJB12', 'MYBL2', 'DBNDD2', 'DUXA', 'MAPT-AS1', 'ACTR1B', 'TUBA1C', 'ZNF678', 'MASP1', 'NUP37', 'EDN1', 'AARS2', 'ZBTB34', 'ZNF608', 'HMOX2', 'BREA2', 'C1ORF204', 'FAM84A', 'IGF2BP2-AS1', 'OR1J4', 'C17ORF50', 'SLC20A1', 'C2ORF16', 'EEF1G', 'WFDC10A', 'ST7', 'FAM99A', 'ASPG', 'RBM4B', 'PLCB1', 'SCN4A', 'DDX5', 'MEP1B', 'PCDHGB1', 'AIG1', 'PROM1', 'ZNF211', 'YTHDF1', 'SMARCAL1', 'GRIK5', 'SLC22A17', 'TPCN2', 'GSTK1', 'IRX4', 'LRRC16A', 'SLC16A3', 'KIAA1644', 'FAM157A', 'LSS', 'RBM10', 'IST1', 'MORF4', 'MYH14', 'FZD4', 'UBQLN1', 'HMGB3', 'NRN1L', 'DTX3', 'P2RY1', 'METTL25', 'ZNF556', 'IRF2BPL', 'OR8K3', 'AAGAB', 'ZNF343', 'TMEM254', 'CCT5', 'LMBRD2', 'CDK17', 'SCGB1B2P', 'SUPT16H', 'RPL10L', 'NDUFS2', 'EFHC1', 'FER1L6', 'RPIA', 'HMBOX1', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.8568453998601825 Spearman Correlation: 0.8271807518925859 Coefficient of Determination: 0.7341840392615557 RMSE: 0.09798480693545181 NRMSE: 0.06603995830443198 MAPE: 207.10890745580573 Pearson Correlation: 0.08874935473277652 Spearman Correlation: 0.11075200438908217 Coefficient of Determination: -1.2939283956518115 RMSE: 0.32431745568502635 NRMSE: 0.2230687711484544 MAPE: 1003.560110454689 Predictor: ElasticNet Pearson Correlation: 0.5338303074485239 Spearman Correlation: 0.4995769723783272 Coefficient of Determination: 0.23668956141658148 RMSE: 0.16604232842010536 NRMSE: 0.11190947646463306 MAPE: 148.1154213280561 Pearson Correlation: 0.12495596407480465 Spearman Correlation: 0.14888215563785084 Coefficient of Determination: 0.002225666197386511 RMSE: 0.2138929940209272 NRMSE: 0.14711772831570974 MAPE: 246.78458436927372 Predictor: RandomForests Pearson Correlation: 0.6161057931487385 Spearman Correlation: 0.5611100947591123 Coefficient of Determination: 0.20385528078116677 RMSE: 0.16957593623292355 NRMSE: 0.11429106316078745 MAPE: 155.84209394961087 Pearson Correlation: 0.1632029775074472 Spearman Correlation: 0.2385790346513049 Coefficient of Determination: 0.026479191991122253 RMSE: 0.21127738593134152 NRMSE: 0.14531868706115422 MAPE: 162.34397688340195 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['PLET1', 'FRAS1', 'LANCL3', 'GIGYF1', 'DGKK', 'MED27', 'RHOU', 'TEX11', 'KIF21A', 'KRTAP5-7', 'CCDC18', 'FAM183CP', 'TRIP12', 'MTUS2', 'CYP46A1', 'ERMP1', 'OR5D13', 'LOC727896', 'GOLT1B', 'GOLGA2', 'RIPPLY3', 'TRIB1', 'CLEC18A', 'LINC01138', 'CA5B', 'MITF', 'DNAAF3', 'SSR2', 'SPATA20', 'CBX7', 'TMC1', 'ALDH5A1', 'CDKN2B-AS1', 'TMED6', 'GNRHR', 'LRTM2', 'APAF1', 'WDR74', 'PEX13', 'ZNF260', 'CCND3', 'PCCB', 'BCL7B', 'RNASET2', 'SNHG11', 'SLC25A32', 'ANKRD20A11P', 'CHD4', 'LINC01558', 'GLIPR1L2', 'DIRC1', 'TRIP6', 'KPNA2', 'RGS14', 'ZFAT-AS1', 'PRIM1', 'MTA3', 'HAS2-AS1', 'PRINS', 'AP5Z1', 'SLAMF6', 'SP1', 'STK24', 'HLA-A', 'PRKACA', 'SCN3A', 'FAM167A', 'HSD17B1', 'FAM21A', 'HTATIP2', 'NBL1', 'SCAMP2', 'GCSAML-AS1', 'ABCB6', 'FAM181B', 'HIST1H2BL', 'KCNC4', 'C7ORF66', 'PREB', 'CYHR1', 'LCK', 'PLEKHN1', 'HMGCS2', 'HYPK', 'ERICH1', 'CA7', 'TMEM104', 'KLC4', 'HAUS6', 'CMTR1', 'WDR63', 'ZNRD1-AS1', 'DDX26B', 'WAPAL', 'CRYBB2', 'WASH2P', 'TSPAN2', 'TSPO2', 'ADAMTSL3', 'EFCAB5', 'GCNT4', 'PIGF', 'HIST1H2BO', 'CTNS', 'PSMD6', 'MAGEB16', 'CCDC74A', 'PSG8', 'SLC19A1', 'JAG1', 'PDZD4', 'CCDC149', 'GTF2E1', 'DHRS11', 'TRAIP', 'JAK3', 'ZNF281', 'GFRA1', 'SCMH1', 'ARMC4', 'CARNS1', 'NOP10', 'PPP1R11', 'CECR5', 'FAM66E', 'ADH7', 'APOE', 'ALS2CR12', 'CSPG4', 'DKFZP434L187', 'CCDC40', 'OR13G1', 'MAPK11', 'EIF3G', 'KCNH4', 'OR11L1', 'FBXL7', 'MND1', 'TSHZ2', 'SPN', 'PPFIA3', 'SEC22B', 'CYP7B1', 'MSRB1', 'SLC9C2', 'AP3D1', 'OR52D1', 'BIN3', 'COL3A1', 'NR0B2', 'FEN1', 'CR1', 'TMEM131', 'TAS1R2', 'PWRN2', 'KLHL41', 'LRRFIP2', 'SLC22A8', 'DICER1-AS1', 'FAM53A', 'KEAP1', 'C20ORF27', 'DEDD', 'SLU7', 'GTF2IRD2B', 'PHKB', 'TMEM88', 'C2ORF72', 'TRIO', 'KDELC1', 'AFF4', 'C4BPA', 'PLRG1', 'TLN2', 'C1QB', 'RNF138P1', 'CYP26B1', 'WIBG', 'BRINP3', 'RPH3A', 'ZNF713', 'VWA5A', 'UGT2B11', 'ABCC12', 'MRPL4', 'MTG2', 'CHST7', 'CENPH', 'ISCA1P1', 'RFNG', 'RANBP6', 'AQP3', 'ZNF501', 'SPAG17', 'ANKRD52', 'ZSCAN25', 'RBM25', 'MYT1', 'NGRN', 'TWSG1', 'VHL', 'PRSS54', 'FAM13A-AS1', 'ATP6V0A1', 'MYLPF', 'GRINA', 'VPREB3', 'FAM180B', 'B3GNT8', 'HDAC9', 'KIAA0226L', 'C6ORF1', 'COBLL1', 'TMEM132A', 'CLDN17', 'PLEKHG1', 'ZNF383', 'FCGR2A', 'HOXD10', 'DNAJC5B', 'XDH', 'VEZT', 'CCDC132', 'AGR2', 'FOXD4L3', 'C22ORF15', 'TPRXL', 'NDUFB6', 'C4ORF27', 'DUSP15', 'TEX29', 'CLK3', 'HABP2', 'LIG1', 'ITSN2', 'RRP7A', 'TBCC', 'HNRNPA1P33', 'FAM96B', 'STON1-GTF2A1L', 'C16ORF13', 'LCAT', 'KLHL12', 'HLA-DOB', 'EP300', 'TRIB3', 'ABCA1', 'SPINK8', 'C15ORF40', 'PCTP', 'HAVCR1', 'STEAP2', 'TRNP1', 'INTS4', 'MTSS1', 'SEC22A', 'SLC23A3', 'MT1E', 'DNTTIP2', 'MAFK', 'HAUS8', 'ERI2', 'APTX', 'AMIGO2', 'HBB', 'CCDC65', 'ARHGAP44', 'FBN3', 'CARD11', 'JSRP1', 'FAM110C', 'GDF2', 'DEPDC5', 'PTGFR', 'DEFB118', 'TMEM132E', 'DENND1B', 'C16ORF82', 'LMBRD1', 'FAM20B', 'SH3GLB2', 'PCSK9', 'SORCS3', 'MDFI', 'CX3CL1', 'KCNU1', 'AREG', 'PRSS58', 'WDFY1', 'ACBD5', 'FOXD4L5', 'CD2AP', 'RBFA', 'SNORA12', 'C9ORF163', 'PSD', 'C3ORF36', 'APOA1BP', 'BCKDHB', 'OR11H6', 'CD209', 'PNLDC1', 'TMEM14B', 'HOOK3', 'HNRNPH1', 'TTC30A', 'GCC1', 'SNORA56', 'GRIN3A', 'RHBDD2', 'LRRC30', 'USP34', 'ANKRD30BP2', 'EIF4A3', 'TRUB1', 'CDCP2', 'IL9', 'FSD2', 'SLC52A2', 'ZNF195', 'LOC145783', 'ZNF821', 'SUOX', 'HADHA', 'SGCG', 'ATP12A', 'LGALS1', 'RPS14', 'CHGB', 'TDRD5', 'CACNA2D2', 'OR5D18', 'RAB4A', 'DHX34', 'LINC00950', 'TRABD2A', 'IKBKE', 'XKR9', 'GSTM2', 'CD320', 'PCAT18', 'SUZ12P1', 'OR2T35', 'TMEM50A', 'RPL23AP7', 'E2F7', 'CASKIN2', 'CYB5D1', 'ST7-OT3', 'KRTAP5-5', 'GNG3', 'GALC', 'EPHB6', 'CAPG', 'RTCA', 'C20ORF24', 'GPHA2', 'ARL14EP', 'LAMTOR3', 'UBE2QL1', 'SCGB1D4', 'ZNF646', 'LINC01550', 'REST', 'FAM182A', 'ADGRF2', 'PLA2G16', 'C21ORF58', 'ITGBL1', 'ZYG11A', 'RSF1', 'CYP4V2', 'FAM86HP', 'TMEM150C', 'RPRD1A', 'CDC27', 'FAM66C', 'IKZF4', 'MGC27382', 'ZNF530', 'SFTPC', 'DNMT1', 'USP17L2', 'ZFP28', 'SMIM7', 'PAN2', 'C19ORF40', 'KIR3DL3', 'FNIP1', 'RAB26', 'FOXI1', 'AIG1', 'HSP90AA1', 'LOC730101', 'IQCA1', 'MAPRE3', 'CYP19A1', 'GBP7', 'CAMKV', 'GPC5', 'ZRANB1', 'CYP2S1', 'AGMO', 'KAT5', 'CDC37L1', 'LHX2', 'NCALD', 'CNGB3', 'KRT38', 'KLHL2', 'RAB25', 'HES4', 'PDE1C', 'RPAP2', 'ZNF692', 'RPA1', 'EFNA4', 'AQP6', 'FAM161A', 'LOC340017', 'BECN1', 'TAS2R4', 'TYMS', 'PCDHB5', 'SLC11A2', 'TDP1', 'PRSS45', 'CDK9', 'ABCB11', 'CYP21A2', 'RAMP3', 'SLC27A4', 'APOC1P1', 'MYO1E', 'WDR90', 'PHLDB3', 'ACRV1', 'MBOAT1', 'TAX1BP1', 'TBC1D26', 'MAGI2', 'BAD', 'CAMK2A', 'PHAX', 'DUSP5', 'IMP3', 'SSTR5', 'LOC100130691', 'COPB2', 'C1QTNF3', 'RBMS2', 'C10ORF105', 'G0S2', 'PPP1R14C', 'FOXO4', 'LAMC3', 'CRYL1', 'GPR32', 'MYO1A', 'KRTCAP3', 'TAGLN2', 'RPS6KA6', 'KRTAP10-1', 'ABCB8', 'KLK1', 'VWC2', 'TMEM214', 'CES4A', 'LOR', 'ARID4B', 'C1QL3', 'LINC01588', 'PRKCI', 'CLDN9', 'RRP1', 'ITGA9', 'ZNF845', 'LRFN4', 'HPS5', 'PLCE1', 'C7ORF60', 'CHCHD4', 'YWHAQ', 'ZNF706', 'CARD6', 'FAM201A', 'TSG1', 'TCEAL1', 'IL23R', 'CNOT3', 'WSCD1', 'MIR99AHG', 'TBL1X', 'C1ORF127', 'SYTL4', 'SSR1', 'C17ORF82', 'SDHC', 'PTRF', 'TMSB15A', 'TEF', 'LINC00479', 'GIMAP2', 'TMEM159', 'TRAM2', 'GNAT1', 'HP', 'FGD4', 'CHST1', 'PMS2P1', 'PRCP', 'AFAP1L1', 'MAST2', 'MSH3', 'ASNA1', 'ZC4H2', 'ENSA', 'PATL1', 'PPWD1', 'DEFB1', 'BRE-AS1', 'ELAVL1', 'SH3RF3', 'SLAMF9', 'NANOG', 'C7ORF57', 'CNIH4', 'LOC391322', 'TCIRG1', 'MAPK4', 'ARGFXP2', 'MAP4K4', 'POM121L8P', 'ACOT11', 'DMRTC1B', 'TAOK1', 'MYPOP', 'AP3M1', 'PLA2G12A', 'LSM1', 'ZNF738', 'ZBTB43', 'HOXD9', 'CIB3', 'ASAP1', 'MMP28', 'GOLGA2P5', 'HMX2', 'KLK8', 'TMEM179B', 'ATP6V1H', 'ARHGAP28', 'CAMSAP1', 'ASPG', 'DPH3', 'LTBR', 'TAF13', 'PRR5L', 'FAM213A', 'RC3H1', 'SOX12', 'ZNF189', 'FBXL5', 'BMS1P5', 'KITLG', 'MIR31HG', 'FAM86EP', 'BRPF3', 'ZDHHC18', 'GMCL1', 'CHN1', 'ANKHD1-EIF4EBP3', 'ACADSB', 'SYT14P1', 'ZBP1', 'CDK12', 'C1QTNF9B-AS1', 'CFHR2', 'DHRS7B', 'ATP5G1', 'PNPLA5', 'B4GALT3', 'KERA', 'CCDC115', 'KRBA1', 'WNT5B', 'SYVN1', 'ATXN3', 'METTL24', 'GTF2I', 'NT5M', 'KIAA1456', 'TBRG4', 'LCE1F', 'UTP14A', 'PEX11B', 'NELFCD', 'PSMA3', 'KIF2A', 'ANO5', 'BRF2', 'TAF1A', 'LINC00442', 'NAA15', 'SLC6A11', 'C2ORF27A', 'PIK3CB', 'SP140', 'SNAR-G1', 'LINS', 'GCHFR', 'FBXO10', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.365435484445734e-15 NRMSE: 7.857292408586417e-16 MAPE: 3.495870746747099e-12 Pearson Correlation: 0.029430862160132992 Spearman Correlation: 0.02738936894474994 Coefficient of Determination: -5.610277940236376 RMSE: 1.6879977128883068 NRMSE: 0.5211317072298808 MAPE: 719.531328361921 Predictor: ElasticNet Pearson Correlation: 0.8535768628014714 Spearman Correlation: 0.827590701691997 Coefficient of Determination: 0.7017804088129733 RMSE: 0.3645664073018492 NRMSE: 0.08511542942235927 MAPE: 253.44873589739203 Pearson Correlation: 0.5686548134766195 Spearman Correlation: 0.5571765233980474 Coefficient of Determination: 0.3171506170670966 RMSE: 0.542530869584924 NRMSE: 0.16749432545612178 MAPE: 144.4382334015961 Predictor: RandomForests Pearson Correlation: 0.6796475186731974 Spearman Correlation: 0.6428535030868563 Coefficient of Determination: 0.4508656048011592 RMSE: 0.4947068074261766 NRMSE: 0.11549934801694449 MAPE: 168.56412126597115 Pearson Correlation: 0.6209717785176824 Spearman Correlation: 0.6427170447479962 Coefficient of Determination: 0.3773968717050711 RMSE: 0.5180451866174084 NRMSE: 0.15993491606230384 MAPE: 98.62860120334878 Protein: TP53 x_train_column_count: 1002 x_train columns: ['NR1H3', 'UBA7', 'ZKSCAN3', 'METTL5', 'MMP23A', 'RB1CC1', 'GNAS', 'AMFR', 'APOL4', 'KRTAP10-4', 'SPRR2D', 'HIST3H2A', 'TMEM101', 'LOC155060', 'FHL1', 'LENG9', 'TRIM43', 'OR14J1', 'NPPA', 'CYP26A1', 'OPRM1', 'NEUROG2', 'HDAC4', 'CDRT15', 'PBOV1', 'SNORA24', 'SH3GL3', 'ARAF', 'ICAM2', 'MYOG', 'HSF4', 'GMNN', 'IPPK', 'PCGF6', 'NEMF', 'NACAP1', 'TCP11', 'SMAD3', 'CCBL2', 'GNLY', 'TNFRSF21', 'CCL2', 'COL3A1', 'USP49', 'GNB1', 'DGKH', 'POFUT2', 'SLC10A7', 'SPTBN2', 'OSBPL5', 'NPY', 'ADAMTS12', 'IL21', 'RPS19BP1', 'C6ORF201', 'PAIP2B', 'HDLBP', 'MOAP1', 'SGK223', 'SHISA9', 'TRMT10A', 'MZT1', 'CPT1B', 'LYPD2', 'CFAP43', 'SMUG1', 'RPL22L1', 'ENDOU', 'MCF2L2', 'GPNMB', 'TAS2R7', 'ADAMTSL1', 'MAT1A', 'MYH13', 'TDRD6', 'FAM167B', 'CTSO', 'CIAO1', 'C5ORF45', 'USF2', 'FBXL20', 'ANKRD29', 'ATP6AP1', 'CCDC172', 'RPS6KB1', 'PPP1R2P9', 'POU2F1', 'BTG3', 'CWF19L1', 'HHEX', 'ABCC6P2', 'MTF1', 'SPANXC', 'IL13RA1', 'LELP1', 'PPP1R42', 'SDHAF4', 'ILKAP', 'KATNB1', 'C15ORF27', 'MTERF4', 'FKTN', 'MVB12B', 'TNFAIP3', 'DPM1', 'SFRP2', 'PRRT2', 'RAP1A', 'RHOC', 'FAM153A', 'OCIAD1', 'BACE2', 'LILRA5', 'LRRC59', 'P2RY10', 'MAGED2', 'CSNK1E', 'C11ORF52', 'HSD17B14', 'PLK1', 'RNF212', 'ZNF282', 'CHP2', 'ASB12', 'ZFP37', 'LTK', 'MPP5', 'EML4', 'AWAT1', 'SPAG17', 'RNF170', 'QRFPR', 'TEDDM1', 'SNED1', 'CSMD1', 'USP27X', 'PRKAG2', 'LINC01366', 'KLRB1', 'TTTY8', 'MSLN', 'PLK2', 'OR4K13', 'PCNX', 'CYP51A1', 'POLK', 'OR8K5', 'GFAP', 'LOC728743', 'SPATA21', 'TRAIP', 'DCK', 'GPR143', 'LCOR', 'KCNH3', 'VSX1', 'TNN', 'FSTL3', 'AMELY', 'TTTY10', 'AGBL5', 'TAS2R46', 'TMEM200A', 'EYA4', 'MYO9A', 'MRPS2', 'USP51', 'KRTAP12-1', 'LOC152225', 'PRAC1', 'OCA2', 'RNF217', 'PLET1', 'LRRC23', 'CAP1', 'TP53I11', 'AKT3', 'PECR', 'IL18R1', 'TMEM249', 'ZC3H12B', 'STARD5', 'ICOS', 'TOP2B', 'ATP2B2', 'ACOT1', 'ATP5E', 'SLC22A10', 'SRP14', 'CDH26', 'TMBIM6', 'RPA3', 'CACNG5', 'ARL4C', 'ERCC4', 'UST', 'LOC284788', 'STAG1', 'UCKL1', 'ZMYND11', 'KRTAP9-2', 'PDE6A', 'LOC340017', 'EPB41', 'OR12D2', 'ASB16', 'FDCSP', 'CWC27', 'HAS2-AS1', 'VAPA', 'FN1', 'TRAPPC9', 'LINC00964', 'C17ORF82', 'GOLGA6L10', 'ANKRD1', 'RAB22A', 'MIB2', 'LINC01300', 'SFXN2', 'PIN4', 'NOVA1', 'NPHS1', 'KRTAP12-2', 'RASGRP3', 'GSTA5', 'STK4', 'TRPS1', 'DUSP22', 'DKK4', 'SMIM4', 'MEIS1', 'MT1L', 'NT5C', 'NXPH1', 'CMTM6', 'TPRX1', 'ACAD8', 'CASP6', 'ACTN3', 'TBC1D2B', 'TCEANC', 'TUBA3D', 'TBX15', 'OGFRL1', 'TAX1BP3', 'EOMES', 'MKL1', 'RPL13AP17', 'ACVR1B', 'FAM157A', 'PTPRD', 'DENND4A', 'SLC11A2', 'SLC22A1', 'ZNF343', 'UBR7', 'ADGRE4P', 'NABP1', 'PXMP4', 'PAPD5', 'NFYA', 'PPP3CB', 'TMEM2', 'WNK4', 'ABCC11', 'MTG2', 'JAKMIP1', 'S1PR3', 'MCAM', 'UCP3', 'RND3', 'CIRBP-AS1', 'HNRNPDL', 'TDH', 'NOTCH2NL', 'LRP8', 'PRR5L', 'TTC3', 'NBEAP1', 'ISG15', 'CLN5', 'SLC27A1', 'ITGAM', 'SYCE1L', 'PELI3', 'CTXN2', 'THRSP', 'CXCL3', 'MGAM2', 'MYNN', 'FAM3A', 'LYPLA2P1', 'FBXL8', 'SH3TC2', 'COX10', 'ELOF1', 'NKAIN2', 'DCAF7', 'OR2S2', 'CYSRT1', 'ZNF615', 'RECQL4', 'KIAA1755', 'RNF180', 'RAB29', 'DDIT4L', 'STAT6', 'UTS2R', 'ADCY8', 'TCP11L2', 'HEYL', 'DKK1', 'SPTLC1', 'SPRED2', 'CHRNG', 'RALGPS2', 'MBNL1-AS1', 'TWF2', 'SPTB', 'LAD1', 'WEE1', 'UBE4A', 'ST3GAL6', 'ATP6V1E2', 'IFNLR1', 'CCDC28B', 'EIF3I', 'LOC284578', 'HSPA9', 'PGD', 'SLAMF1', 'IMPG1', 'FN3KRP', 'SMC4', 'MSL3P1', 'CAMK2N2', 'KIAA0040', 'SNORA77', 'DGKG', 'AFM', 'ZFAT-AS1', 'SIGLEC17P', 'HSD3B7', 'AQP12A', 'CSE1L', 'MAFB', 'ZNF121', 'HDAC1', 'RASGEF1B', 'ALK', 'SPINK1', 'ARHGEF7', 'BSG', 'IMPA1', 'SMPD1', 'PPP1R1C', 'RPL27A', 'ADGRF2', 'ADARB1', 'FGF13', 'PKIA', 'GPR141', 'ZSWIM6', 'BCL9', 'ELL2', 'SPATA32', 'AKR7A3', 'BRD8', 'GET4', 'SAMD4A', 'PPP1R18', 'LRRC18', 'ATP10D', 'CEP76', 'CD22', 'FRG2DP', 'MEGF6', 'KRTAP12-4', 'LOC541473', 'VIM', 'SPEM1', 'SEMA4B', 'ETF1', 'RBM26', 'SKP2', 'BLOC1S4', 'CYP4F8', 'ITPR2', 'PMF1', 'ASB3', 'URAHP', 'C12ORF54', 'KRT6A', 'TRPC6', 'FUBP1', 'SCYL2', 'NANOS3', 'HAND2-AS1', 'ACER1', 'GOLGA2P5', 'DNASE1L3', 'TSC1', 'RAG2', 'NAB1', 'KCTD18', 'HMMR', 'ZBTB26', 'PTENP1', 'SPINK9', 'MIR99AHG', 'KLHL3', 'C9', 'RAB8B', 'ZNF430', 'GABRE', 'DPPA3', 'TBC1D15', 'PIRT', 'NPPB', 'NPNT', 'SNRNP70', 'NKAP', 'PRMT7', 'LY96', 'CDC14A', 'TMPO', 'LOC100134868', 'MX1', 'FDXR', 'CUL5', 'HIST1H2AK', 'DRD5', 'SH3BGRL3', 'LY6D', 'RAPGEF2', 'APCS', 'MAPT', 'DUSP7', 'LINGO1', 'OSGEPL1', 'HSPA1B', 'TP73-AS1', 'RHOA', 'DNAJC25', 'TINAGL1', 'DOCK6', 'GGA2', 'EXO5', 'YARS', 'RHBG', 'CEACAM21', 'PHF2', 'ECHDC1', 'GPATCH11', 'HOOK2', 'TRIM7', 'PRRG3', 'TBC1D9B', 'FRS3', 'AGTRAP', 'ACTL9', 'CC2D2A', 'USO1', 'SLC25A31', 'MYOCD', 'SCN1B', 'OCLM', 'YY1AP1', 'PDCD2L', 'NXF1', 'FLJ37201', 'MIR7-3HG', 'RBM10', 'ITGAE', 'APOPT1', 'PREB', 'CBX4', 'P3H2', 'CPED1', 'ZNF43', 'KIAA0430', 'TSGA13', 'CKLF', 'IFI30', 'OLFM3', 'DCSTAMP', 'MGAT5B', 'PIH1D1', 'EDC3', 'ZMAT1', 'TBL1X', 'TEF', 'KIAA1715', 'OR5M1', 'FAM102A', 'CENPQ', 'LINC00092', 'RAI1', 'GABRA1', 'CMPK1', 'KRT9', 'OR6C70', 'ABCA5', 'C8ORF34', 'SGCD', 'TESK1', 'ODF4', 'SLC7A8', 'DAXX', 'ADGRG3', 'MUS81', 'NLGN4X', 'DMRTC2', 'RABL2B', 'SATB2', 'PKD2', 'FHDC1', 'WBSCR16', 'ANKRD20A3', 'LOC344967', 'CLPSL2', 'IGSF1', 'GPD1L', 'HACL1', 'KCNJ5', 'ATP12A', 'UGT2A1', 'PSMG3', 'PGPEP1L', 'QTRT1', 'STUB1', 'PSEN2', 'PHF23', 'CPOX', 'WASF2', 'ING1', 'DDX17', 'LUZP6', 'TMEM106A', 'C21ORF2', 'SMAD6', 'NID2', 'RPS2', 'HEBP1', 'CSF1', 'CD84', 'SLC4A2', 'KATNAL2', 'FMO3', 'CALD1', 'KLK10', 'NDUFB10', 'PIN1P1', 'NLRP12', 'FAM173B', 'USP28', 'HSPA12B', 'TRPM7', 'SAMM50', 'MT2A', 'FOXP1', 'FOLR1', 'GPR135', 'RNASE1', 'RAB2B', 'ZNF143', 'ARSG', 'ZNF490', 'EMILIN1', 'SERPINB8', 'RGS22', 'GOLGA7B', 'KIAA1024', 'XCL1', 'STT3B', 'WDR89', 'POLR3F', 'FAM133A', 'CBX6', 'STAG2', 'DIRAS2', 'LINC00937', 'EXTL3', 'C4ORF46', 'GDF2', 'RNF128', 'TNFRSF8', 'STK38', 'ZNF589', 'C2ORF15', 'COMMD2', 'FAM27C', 'KCNT2', 'BPIFC', 'CDRT4', 'ARL13B', 'BAIAP2-AS1', 'CD19', 'OR52K2', 'B3GALNT1', 'KRTAP10-5', 'CH25H', 'APBA2', 'MCF2L', 'ELL3', 'ZNF35', 'RPS6', 'OR2D2', 'KCTD2', 'PLXND1', 'SCML2', 'HDAC3', 'RAB11FIP3', 'MARS', 'SNORA71E', 'METTL21C', 'TK2', 'LINC01098', 'CCL24', 'APPL2', 'PSMC3', 'AFP', 'ARNT2', 'MIR1-1HG', 'CCDC116', 'KDM4A', 'ASIC4', 'SELT', 'ZBTB45', 'SPG7', 'OR6T1', 'SKA3', 'ZNF485', 'TLX1NB', 'TMEM62', 'LINC00662', 'HOMER2', 'PPIC', 'PRELP', 'C1GALT1C1L', 'DPH5', 'TPTE2P6', 'HIST4H4', 'UNC13B', 'RHOB', 'LSR', 'ARHGAP5', 'TMEM216', 'SLC2A6', 'TAS2R5', 'SLC35A5', 'DEFB136', 'MESP1', 'SECISBP2L', 'TMEM200B', 'ZNF157', 'MRPS15', 'SFTPA1', 'ZNF529', 'GOLGA6C', 'C11ORF70', 'CRTAP', 'SMARCC1', 'THYN1', 'ZP1', 'SFTPA2', 'SLC39A7', 'DCP1A', 'PP7080', 'TMIGD2', 'ZSCAN22', 'CHST13', 'KLF10', 'ISM1', 'RARRES3', 'LAX1', 'ACHE', 'NRAS', 'NR1D2', 'SRPX2', 'GABRA3', 'ADGRA2', 'C1ORF64', 'RGS20', 'CT45A4', 'KLF2', 'RPUSD3', 'CXXC4', 'HSPH1', 'GRIA1', 'SZT2', 'PIKFYVE', 'ELMO1', 'RPS27', 'KCNK18', 'CNOT6', 'F8A1', 'CTU2', 'LIPE', 'SFTPB', 'LINC00596', 'NAA35', 'TMEM9', 'EGFR', 'NUCKS1', 'COLCA1', 'PUS10', 'TMPRSS11D', 'WWOX', 'PAXIP1-AS1', 'C11ORF57', 'ESYT2', 'SPARC', 'ELAVL2', 'METTL9', 'ACAP3', 'RASSF2', 'TRIM24', 'TBP', 'SLC25A40', 'CSF3R', 'CFAP74', 'KRTAP10-12', 'S100A12', 'PELI1', 'ASIC3', 'LINC01588', 'ALX1', 'C21ORF33', 'LINC00162', 'NR3C2', 'MC1R', 'HLA-E', 'ARL6IP6', 'HTR1F', 'TYMS', 'IFT46', 'GPRC6A', 'SERTM1', 'CRIPT', 'MIPEP', 'ASB7', 'LINC01102', 'NEK3', 'FLT3LG', 'PLLP', 'DSCR10', 'KRTAP21-1', 'HGS', 'ETFDH', 'NCBP1', 'OR5AS1', 'PSMA2', 'CECR5-AS1', 'PROKR1', 'NFIA', 'GNGT1', 'DMXL2', 'FAM9A', 'ICA1L', 'LDLRAP1', 'GLYATL3', 'TMEM259', 'PSD', 'DCLRE1B', 'SDHAP2', 'SLC41A3', 'JARID2', 'SLC25A11', 'KIF5A', 'HDX', 'NUAK2', 'EBAG9', 'MESP2', 'SLC15A4', 'XYLT2', 'PKP2', 'ABCD1', 'MR1', 'ST7-OT4', 'BACH2', 'KLHL23', 'LOC644936', 'CD1A', 'PRAME', 'MGAT4C', 'GNA12', 'OSBPL7', 'SMCR8', 'TST', 'SPANXN1', 'FAM167A-AS1', 'MFHAS1', 'HIST1H3J', 'ZNF232', 'CDKN2A-AS1', 'SEC23IP', 'DGKE', 'EPHA1', 'FOLR3', 'GATC', 'ACSF3', 'RPL23', 'FCRL3', 'FBXO42', 'RAD21', 'LOC285074', 'ARHGAP11A', 'C1QTNF4', 'MAGEB2', 'NEUROD2', 'AKR1D1', 'SYT11', 'SOX21', 'TRIM2', 'TPD52L2', 'ASH1L', 'ATIC', 'B3GALNT2', 'HSD17B7P2', 'PIK3CB', 'CYP19A1', 'EME1', 'MOK', 'SLC6A20', 'ZNF443', 'STX6', 'OR10C1', 'UIMC1', 'HPCAL4', 'FZD4', 'ACTC1', 'TRIML1', 'UBASH3B', 'ZYG11B', 'ANP32C', 'CDC34', 'IYD', 'GSTM2', 'SIX6', 'ANKFN1', 'EZH1', 'C11ORF1', 'PKP3', 'SNAR-C4', 'CLPS', 'GUCY1A3', 'ZNF845', 'ARFGEF3', 'NFKB2', 'ZNF71', 'GNAL', 'ARGFX', 'TECTA', 'IKBKB', 'WDR37', 'TCTEX1D4', 'FEZF1', 'FBXO15', 'ZBTB22', 'LRRN3', 'KRTAP2-1', 'OSTM1', 'BNIP2', 'SLC27A6', 'KMT2B', 'ANP32AP1', 'EPYC', 'COL9A2', 'NSMCE4A', 'PIGF', 'HSPD1', 'RGCC', 'PSMA5', 'SOX2', 'MKLN1', 'ZNF264', 'CNTFR-AS1', 'C16ORF58', 'ADGRA3', 'FAM183CP', 'IFRD1', 'TAS2R30', 'JHDM1D-AS1', 'POLE', 'KDELR2', 'ZNF321P', 'MSN', 'DGUOK', 'NIF3L1', 'LVRN', 'IFRD2', 'FAS', 'HIST1H4F', 'IL1R2', 'KLF7', 'CRHBP', 'PLP1', 'ARID3B', 'NIP7', 'TFR2', 'FAM104A', 'LINC00950', 'NSUN7', 'IQCJ', 'B4GALT7', 'GLUD2', 'TBX22', 'FKBP9', 'C9ORF43', 'ZNF138', 'GMIP', 'KLHL15', 'ARAP3', 'JAZF1', 'SALL3', 'SASH3', 'AVPR1B', 'CSRNP1', 'GCSAM', 'POLD4', 'SF3B3', 'ELK3', 'ELAVL4', 'NCSTN', 'UNC5D', 'YIPF6', 'OR51G1', 'CPSF3L', 'RUSC1-AS1', 'C19ORF44', 'CIDEB', 'TMEM160', 'GNG3', 'TGM7', 'SSR3', 'DZIP1', 'RCBTB2', 'SLC26A1', 'PPM1B', 'DERL2', 'PRSS37', 'EXOSC8', 'PRPF38A', 'ELF1', 'SNORD22', 'SNORA5A', 'HSD11B1L', 'NOL8', 'LMBR1L', 'DSG2', 'LYL1', 'PIPSL', 'MACROD2', 'CEP97', 'GAS8', 'TCF7', 'CORO1A', 'PRR16', 'TMX1', 'POLR2M', 'NDUFA13', 'PIP5KL1', 'CD4', 'DNAAF3', 'NUDT6', 'C7ORF73', 'PRR23C', 'H3F3B', 'CCBL1', 'EXOC3L1', 'SETDB2', 'FAM214A', 'OR51F1', 'RHOBTB2', 'SEC23B', 'MAP1LC3B2', 'IL3RA', 'CCL16', 'TFB1M', 'WASF1', 'FAM71F1', 'WDR18', 'PPP1CA', 'B3GAT3', 'CLEC4D', 'CRY2', 'RNLS', 'PCDHA12', 'C17ORF59', 'TEFM', 'ERRFI1', 'ZNF781', 'AJUBA', 'ZNF815P', 'SFMBT1', 'SLC25A6', 'SERP2', 'LOC100192426', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.5555345138135483e-15 NRMSE: 3.7383670122892295e-16 MAPE: 3.777299018364836e-12 Pearson Correlation: 0.2041236901728325 Spearman Correlation: 0.1708325540218706 Coefficient of Determination: -1.1784144883285252 RMSE: 0.6353181945843346 NRMSE: 0.23690963332239542 MAPE: 863.364202769706 Predictor: ElasticNet Pearson Correlation: 0.8489734719850761 Spearman Correlation: 0.7858678109436882 Coefficient of Determination: 0.6862884772725115 RMSE: 0.252107986786282 NRMSE: 0.060588316939745736 MAPE: 289.9774861352122 Pearson Correlation: 0.4716087864381321 Spearman Correlation: 0.401005000062345 Coefficient of Determination: 0.20073301709672386 RMSE: 0.38482827246409085 NRMSE: 0.14350214695363403 MAPE: 567.8286198522566 Predictor: RandomForests Pearson Correlation: 0.6841845072560785 Spearman Correlation: 0.5840350519502922 Coefficient of Determination: 0.39607250418119777 RMSE: 0.34979513934556283 NRMSE: 0.08406516206334123 MAPE: 496.22230900828043 Pearson Correlation: 0.4927856340072236 Spearman Correlation: 0.34984725495330365 Coefficient of Determination: 0.22261825943539115 RMSE: 0.37952308926337414 NRMSE: 0.14152384849232166 MAPE: 388.7089731540569 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['SMPDL3B', 'INHBC', 'LIPK', 'TOMM70A', 'GAB3', 'CGNL1', 'ARGFXP2', 'CMTM6', 'TFB2M', 'SPINK13', 'KCNJ1', 'GEM', 'TMEM39B', 'ZNF24', 'ERBB4', 'PZP', 'OLMALINC', 'THBS4', 'PNO1', 'FBXL13', 'MGC16275', 'TSGA10IP', 'EFCAB1', 'EIF2B1', 'DDX31', 'ANTXR1', 'TBX5', 'DLC1', 'STXBP1', 'ATP5G2', 'TCEANC2', 'POLA1', 'PDXDC2P', 'ZFHX4-AS1', 'USP37', 'FKBP2', 'CSNK1G2', 'PRSS3P2', 'DGKI', 'FOLR1', 'TMEM57', 'VENTX', 'USP25', 'SRRD', 'PRDM13', 'EPHB4', 'SPOCK1', 'SGCB', 'ZIM2', 'SLC39A11', 'ZNF224', 'INSRR', 'CARNS1', 'CHD6', 'EPS15', 'LAPTM5', 'XRCC6P5', 'CCNYL1', 'FAM43A', 'PQLC2L', 'DOHH', 'CCT6B', 'TRIM22', 'PLCB3', 'GLYR1', 'SMEK3P', 'MCCC1', 'SFSWAP', 'FGFR1', 'SLC20A1', 'LRRC39', 'PCDH9', 'KBTBD7', 'QSER1', 'ZSCAN20', 'DEFB126', 'ATG3', 'FAM76B', 'THAP2', 'OR52N1', 'MTR', 'SDC1', 'SLC7A8', 'SSMEM1', 'NR5A1', 'UBXN2A', 'KCNIP1', 'ATP8B1', 'PMVK', 'TXNL4B', 'ZDHHC4', 'HOXA4', 'SMAD6', 'CTSC', 'GPR75', 'MTERF3', 'TVP23A', 'ASH2L', 'WNT10B', 'GAS7', 'C18ORF42', 'GPR137C', 'QTRTD1', 'LOC728392', 'GORASP1', 'SOGA3', 'SCYL3', 'RCE1', 'EFEMP2', 'WEE2-AS1', 'ALG5', 'MRC1', 'POLE', 'USP39', 'MS4A8', 'RAB3D', 'BNIP3L', 'SUPT5H', 'PNMAL2', 'CAD', 'ANKRD45', 'PCAT18', 'FOXN4', 'NCDN', 'PMCH', 'C8B', 'TM9SF4', 'NAP1L6', 'NR5A2', 'CEP112', 'ADCK5', 'MND1', 'C9ORF129', 'TMPRSS9', 'OR1M1', 'MOB3B', 'C3ORF67', 'ZNF449', 'GBP7', 'LRR1', 'DYM', 'FBXO43', 'HSD17B10', 'REV3L', 'ZNF256', 'WNK1', 'IQGAP2', 'EGFL7', 'OR9Q1', 'C20ORF195', 'SFRP5', 'AP4S1', 'ZNF322P1', 'KRTAP21-1', 'RBM14', 'PAH', 'SELENBP1', 'PARD6G-AS1', 'CRISP2', 'GOLGA6B', 'CUEDC2', 'CTBP2', 'INSC', 'COMMD5', 'FAM185A', 'CAPN11', 'MRPS16', 'NEUROG3', 'HLA-DOB', 'ARID4A', 'PSMD12', 'ERF', 'LRRC15', 'DEGS2', 'CDK1', 'HJURP', 'CYBA', 'CYTL1', 'ABCC8', 'TMED6', 'WDR55', 'CCDC110', 'TPSAB1', 'KCTD11', 'PLCXD3', 'OR10S1', 'CHRNB3', 'LEFTY2', 'TNFRSF10B', 'LZTFL1', 'MFSD2B', 'FAM58A', 'ZNF853', 'MAP3K14-AS1', 'PI4KAP1', 'NUP155', 'TIMM22', 'TAS2R30', 'TMF1', 'MCEE', 'PRMT1', 'PRG3', 'ZNF493', 'WLS', 'PRR18', 'ASB12', 'MYL6', 'FAM71E2', 'SMC1A', 'VGF', 'JAKMIP3', 'ZSCAN26', 'TRMT44', 'PHPT1', 'GFRAL', 'TMEM181', 'C14ORF93', 'CAMKMT', 'ABT1', 'KCNRG', 'SYNJ2', 'KRTCAP2', 'LOH12CR1', 'AAED1', 'ATP5C1', 'HABP2', 'LMNTD2', 'RNF186', 'MYO1E', 'MBD5', 'LINC00922', 'SNRNP35', 'CD160', 'RPLP1', 'EFNB2', 'OSMR', 'TRIM29', 'NELFB', 'PRSS12', 'PTCHD3', 'LEO1', 'C22ORF34', 'SERPINB1', 'NAV2', 'FXR2', 'ATM', 'PROSER2', 'LHCGR', 'PALMD', 'TRIM60', 'ARHGDIB', 'STARD6', 'KRTAP10-6', 'IFT43', 'POLR3K', 'MAP3K15', 'LINC00189', 'NUDT1', 'NSUN5', 'CLEC1B', 'NAGLU', 'FAM149A', 'IGIP', 'PDLIM3', 'MAPKAPK3', 'C4ORF45', 'L1CAM', 'HIST1H2AA', 'HIST1H1C', 'C9ORF114', 'CAMKK1', 'MEF2BNB-MEF2B', 'VENTXP7', 'NDUFB4', 'IL12A', 'SAMD1', 'KATNAL2', 'GCLC', 'LINC00294', 'ING3', 'G6PC3', 'CFI', 'DHRS7', 'TRIM75P', 'CDH11', 'RELT', 'LOC285847', 'MMP28', 'RPL13P5', 'TOMM7', 'CCNY', 'HAND1', 'CELP', 'RNASE13', 'AMN1', 'KDR', 'CTPS1', 'CPA5', 'MED10', 'MLIP', 'TRABD2A', 'NOP16', 'IVNS1ABP', 'EIF4G3', 'INAFM1', 'NINL', 'RPS3', 'NUTM2A-AS1', 'RABAC1', 'EMX1', 'KLK4', 'KCNG3', 'IFNW1', 'PART1', 'GABRE', 'ADGRD1', 'GGA1', 'SLC26A1', 'MOV10', 'SPTBN4', 'TMEM127', 'SNORA44', 'RNF145', 'TMEM169', 'CT47B1', 'B2M', 'NEK3', 'PAAF1', 'SMG1P3', 'AGRP', 'ZNF561', 'IKBKB', 'C19ORF33', 'CCDC66', 'DDX24', 'ANKRD44', 'F2RL3', 'DMXL1', 'MDN1', 'LOC553137', 'VPS41', 'CEACAM22P', 'AARSD1', 'PRKCDBP', 'DNAJC17', 'AHNAK2', 'KIAA2013', 'ZNF345', 'HHIPL2', 'ITGB1BP1', 'BAIAP2-AS1', 'USP33', 'SEC24C', 'HDAC8', 'OR7G2', 'KCNIP2', 'CRAT', 'SLC2A4RG', 'TMEM140', 'ANKEF1', 'SNX10', 'SLC2A5', 'KIF3B', 'KCNK9', 'CCDC67', 'ALDH1A2', 'RETN', 'RAB2B', 'AGBL3', 'SDR39U1', 'CEP57', 'A2M-AS1', 'BUD13', 'SOX2-OT', 'WFDC9', 'MAML1', 'NTRK1', 'CACHD1', 'ARPC3', 'ZNF429', 'ZNF841', 'TPK1', 'FNDC3A', 'CDH10', 'PNLIPRP2', 'AQP8', 'PROSER1', 'SWI5', 'SLC38A3', 'TWF2', 'GOLGA2P5', 'ABCA13', 'WDFY2', 'FAM71E1', 'ANO8', 'ATP5G1', 'NDUFB1', 'UNC5C', 'MAGI1', 'LINC00602', 'FAM90A7P', 'SLC25A2', 'SAMM50', 'TMEM248', 'TBC1D16', 'HS6ST3', 'MCMBP', 'LILRA6', 'SHISA6', 'LAMTOR3', 'CIPC', 'COPE', 'ARID2', 'TUBA3E', 'KLHL35', 'ASB17', 'SLC45A3', 'ZNF699', 'ARHGEF25', 'CSTF2T', 'ZNF138', 'PTDSS2', 'ZNF101', 'C22ORF15', 'GPR171', 'SEPT2', 'ADAL', 'CCDC169', 'MTVR2', 'LRP12', 'NELL1', 'PARG', 'BRDT', 'SNAPC5', 'PAFAH1B3', 'LRRC32', 'SPANXN1', 'CHST3', 'MARCH5', 'DUSP7', 'CLDN7', 'ATP5L', 'PAX2', 'KRTAP10-9', 'RAD51D', 'SLTM', 'B4GALT6', 'PRAF2', 'GRXCR2', 'ANKRD55', 'FICD', 'VAMP3', 'PRKAR2A', 'PFAS', 'HLA-DRB5', 'PIR', 'ZNF426', 'EPN1', 'WNT7A', 'LY6G6E', 'FEZF2', 'USP3', 'SHROOM2', 'MRPL42', 'NEUROD1', 'CYP4F2', 'OR6C75', 'ZMAT4', 'CCDC171', 'LBX2-AS1', 'BCL2L2', 'KCNN1', 'THAP5', 'DIAPH2', 'PLTP', 'LINC01144', 'KLHDC9', 'PNMAL1', 'AMMECR1L', 'SEPT4', 'PCDH20', 'CBLN4', 'ICMT', 'AGAP3', 'KRTAP27-1', 'TMEM42', 'OR4F17', 'HLA-DQA1', 'TH', 'DCAF11', 'SPHK2', 'CXADRP3', 'FOXO1', 'CELA1', 'SNORA70B', 'MED7', 'SERPINB5', 'ADAMTSL3', 'CGB2', 'CNST', 'HSF2', 'CAPSL', 'C19ORF66', 'TMEM138', 'ANKRD33', 'USP5', 'ABCA2', 'TIMM10', 'EMC8', 'MARCKS', 'SRXN1', 'INPPL1', 'MBLAC1', 'LAS1L', 'SNX2', 'TDH', 'SBNO1', 'RNF13', 'TEX29', 'TTLL5', 'GMPR', 'DHDDS', 'ARHGAP9', 'BAGE2', 'PYROXD1', 'PIGC', 'MPLKIP', 'CECR1', 'C17ORF75', 'ISLR', 'NOMO3', 'S1PR2', 'COG5', 'CNIH2', 'SETD8', 'NR4A1', 'P2RY12', 'PAK2', 'CT47A11', 'PRPS1L1', 'PHLPP2', 'DMGDH', 'HBG2', 'LGI4', 'OR10T2', 'CD1B', 'TAC3', 'SNORA20', 'TRAP1', 'ZBTB41', 'GPD2', 'RRN3P3', 'PTPRK', 'COPA', 'FOXD4L3', 'RAB4A', 'ANKRD34A', 'ADGRG2', 'ZNF346', 'TYW3', 'APOA1', 'ZMYND19', 'TFAP2A', 'NCF4', 'HIST2H2AB', 'TMEM254', 'HAUS4', 'MLYCD', 'TNFRSF1A', 'SMG5', 'MKRN2', 'OVGP1', 'FDCSP', 'POLR2J4', 'MGME1', 'HDAC6', 'HTR4', 'FAM195A', 'SIKE1', 'KRTDAP', 'RAB37', 'UGGT1', 'AOC3', 'ECI2', 'TRIM44', 'CEP170B', 'ITIH6', 'ADRA2A', 'LOC389033', 'EDNRA', 'HNRNPL', 'EI24', 'EMC6', 'NCOA5', 'NAA40', 'PERM1', 'VWA5B2', 'RBP7', 'DENND6B', 'MYL9', 'DXO', 'NOG', 'ZCRB1', 'TLK2', 'LYSMD3', 'MCHR2', 'ENOSF1', 'TPGS1', 'HSD52', 'ANP32A', 'TNFAIP6', 'HIC1', 'KIFC1', 'MS4A5', 'MAOA', 'HHATL', 'OSBPL6', 'SEC11C', 'TBL1XR1', 'POM121L12', 'ARID3A', 'ECHS1', 'FAM90A1', 'ARHGAP32', 'C6ORF106', 'TMEM200B', 'TRIM66', 'PDCD2L', 'NFASC', 'INO80B', 'FAM71B', 'MAP2K1', 'DSPP', 'KLHDC7A', 'SNORA24', 'UBQLN4', 'OTUB1', 'DUS1L', 'LHFPL2', 'SLC7A5', 'STX3', 'RAB3IL1', 'ATG10', 'SEC61A1', 'SLCO4C1', 'ERO1LB', 'RARG', 'KLHL7', 'ZNF252P-AS1', 'MAGT1', 'JAG2', 'HTRA2', 'LYN', 'PCNA', 'COA5', 'RAD18', 'LOC286359', 'PSIP1', 'HCG11', 'NDUFB2-AS1', 'GYPE', 'MFI2', 'CKAP2L', 'SLC7A13', 'NDUFS3', 'WFDC2', 'MFSD7', 'SLC9C1', 'KLHL28', 'ZNF792', 'CXCL9', 'FDX1L', 'PDHA2', 'NR1I3', 'TM9SF3', 'BAD', 'FAS', 'KLHL34', 'TAB2', 'SH3GL3', 'SLC25A3P1', 'CFAP57', 'ZNF572', 'WBSCR22', 'CROT', 'CYP2C9', 'PPP2R1B', 'PJA2', 'LINC00705', 'NUTM2A', 'OXGR1', 'PCDHB10', 'NUMB', 'PLCG2', 'ABCB5', 'NEUROG2', 'TINF2', 'DPY19L2P1', 'SLC35G3', 'HTR3A', 'CLIP4', 'RGS16', 'GDPGP1', 'ZSCAN16', 'LOC400043', 'APRT', 'ADAD2', 'C20ORF85', 'PVT1', 'CSTF2', 'FGR', 'EBF1', 'BET1P1', 'ZNF826P', 'OR51V1', 'GIMAP1', 'UNC119B', 'METRNL', 'SMARCA2', 'USP28', 'RNF44', 'B4GALT1', 'GMFB', 'RDH16', 'SLC5A6', 'DPCD', 'MICU2', 'TRAF3IP3', 'MYBL2', 'TMCO3', 'TCF20', 'KCNK15', 'SYT8', 'RASA4CP', 'CRYZL1', 'ATP8B4', 'AIDA', 'STRN', 'HGS', 'ADGRB1', 'MUC7', 'TERC', 'NKX1-2', 'CKMT2', 'KIAA1804', 'PMS2', 'MADD', 'HSD17B3', 'SLC25A15', 'H2AFX', 'DGCR5', 'DHRSX', 'TMEM14E', 'XYLT1', 'CCNO', 'MEF2C', 'TMEM216', 'SAC3D1', 'CLPSL2', 'PTPDC1', 'NF1P2', 'FOXA3', 'MEF2A', 'CHCHD7', 'NPDC1', 'LINGO3', 'POLD2', 'LGI2', 'OMP', 'KCNB1', 'RBM10', 'BBX', 'OR2A9P', 'SLC25A3', 'SUMO2', 'AR', 'GMPS', 'FGA', 'COL18A1', 'OGFOD1', 'ACSL6', 'SNORA80A', 'ZSWIM4', 'SLC19A1', 'FBXL5', 'SIGLEC15', 'TBC1D8', 'AASDH', 'SSBP2', 'FOXQ1', 'NUBP2', 'SLC22A18', 'GLRX', 'ZNF500', 'CCDC127', 'SPATA45', 'IGSF22', 'CCDC120', 'ST3GAL4', 'DHRS12', 'LOC100287704', 'LLGL2', 'ZDBF2', 'RNF7', 'CLSTN2', 'ATL2', 'PDZD4', 'PBDC1', 'ZNF805', 'CNGB1', 'TMEM200C', 'CYP27B1', 'CINP', 'INO80C', 'SNTB2', 'PORCN', 'OR8B12', 'LOC641367', 'TISP43', 'SNORA15', 'DMP1', 'CASC2', 'DSCR4', 'MARVELD2', 'R3HDM4', 'LOC100130417', 'ZBTB5', 'GPRC5B', 'IFNGR2', 'B3GALT5-AS1', 'KRT31', 'C2ORF81', 'CLCC1', 'ADAM3A', 'CTSL', 'MOGAT3', 'ALPP', 'CNTN6', 'TMEM190', 'LINC00235', 'SNAR-A13', 'CREG1', 'QDPR', 'MRPL32', 'USP6NL', 'MARC2', 'UGT1A1', 'ZFY', 'ARHGAP15', 'PARP10', 'TSHZ1', 'TMEM41B', 'C1RL', 'C9ORF135', 'BST1', 'DEK', 'CDCA3', 'SNX1', 'N4BP2', 'KCNMB1', 'FGF7', 'ZNF707', 'FAM122A', 'FERMT2', 'ZNF286B', 'C12ORF77', 'USP24', 'ELAVL3', 'MCRS1', 'CCDC54', 'MRPL15', 'CCND3', 'SNURF', 'NDUFV3', 'RADIL', 'HYPM', 'NSFL1C', 'STK36', 'OR5L2', 'RAB40AL', 'FUCA1', 'SRP19', 'KIAA0040', 'FCRL1', 'SLC31A1', 'PLP2', 'SP5', 'DEFB128', 'USF1', 'POLR2K', 'RPL39', 'IP6K1', 'P3H1', 'BRAP', 'SLC9A7', 'KNSTRN', 'FAM110B', 'GFM2', 'NXF4', 'LOC143188', 'PCDHA5', 'FIBCD1', 'GLUD2', 'NFAT5', 'SNORD8', 'TMEM37', 'PAIP1', 'C10ORF11', 'GOT2', 'MORC1', 'ARL13A', 'TMEM63B', 'MRPL37', 'LIPI', 'SLC25A53', 'C2CD4D', 'NRM', 'KBTBD13', 'AKR7A2', 'RTN3', 'RPP38', 'AIM1L', 'CHRNB4', 'COLEC10', 'CHIC2', 'FBXO15', 'ACP5', 'CHADL', 'JAG1', 'SERPINA7', 'IWS1', 'HDDC3', 'POLR2H', 'RABGGTA', 'PIK3CB', 'LINC00483', 'AZGP1', 'NOL8', 'MCOLN3', 'CALCB', 'OR5A1', 'IL22RA1', 'BPI', 'TMEM120A', 'ZMYND10', 'RHOV', 'FMNL1', 'FLJ36777', 'OR2V2', 'HMSD', 'OR6C76', 'SIAH2', 'GGT6', 'CCSER1', 'FKBP1B', 'TSIX', 'STXBP5L', 'PWARSN', 'IRAK1BP1', 'YME1L1', 'PLA2G16', 'ASNSD1', 'COMT', 'RIPK4', 'GALP', 'NANOG', 'PPP2CB', 'TTC36', 'SYNPO2L', 'TCEAL3', 'SNORA61', 'HNMT', 'SERPINA10', 'RPL39L', 'SPTBN2', 'NINJ1', 'C12ORF60', 'ACAD8', 'KBTBD12', 'CENPK', 'CYP2S1', 'TRAPPC13', 'PLB1', 'GBP1P1', 'TRPV1', 'GPN3', 'PAPD4', 'EPB41L4B', 'CCT8', 'TCF7', 'PARD3B', 'TAS2R16', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.9999999999999993 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.0296316890728683e-15 NRMSE: 5.959149663793998e-16 MAPE: 1.8538851035501617e-12 Pearson Correlation: 0.203020349386602 Spearman Correlation: 0.2001496278008454 Coefficient of Determination: -2.088110098869561 RMSE: 1.0771740209773417 NRMSE: 0.3521442417134727 MAPE: 968.6075493541978 Predictor: ElasticNet Pearson Correlation: 0.8844311312991399 Spearman Correlation: 0.8712312627545974 Coefficient of Determination: 0.7482304423957189 RMSE: 0.3859574592025319 NRMSE: 0.07591610133802752 MAPE: 184.93163149545052 Pearson Correlation: 0.19788056226008216 Spearman Correlation: 0.13750046758687764 Coefficient of Determination: -0.23420830146090044 RMSE: 0.6809789922929217 NRMSE: 0.22262218192583008 MAPE: 1290.962913721249 Predictor: RandomForests Pearson Correlation: 0.6144598864746184 Spearman Correlation: 0.6023857077927557 Coefficient of Determination: 0.31342032579314627 RMSE: 0.6373577946898678 NRMSE: 0.12536541988392363 MAPE: 309.4896213563852 Pearson Correlation: 0.13790305987774037 Spearman Correlation: 0.1479644384593324 Coefficient of Determination: -0.06198762209842812 RMSE: 0.6316830306503667 NRMSE: 0.20650659735537827 MAPE: 1199.0667096967948 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['IFT74', 'GBA', 'ZNF679', 'HNRNPH1', 'KCNMB1', 'KEL', 'OR56A1', 'CCDC43', 'C6ORF201', 'LBX1', 'CECR7', 'GABPA', 'SNHG6', 'EFCAB14', 'BHLHE41', 'BAG2', 'BUD13', 'SPAG8', 'ZNF335', 'TMEM207', 'F2', 'C5ORF15', 'MXRA5', 'MRPL57', 'PCBP3', 'GLMP', 'ADAM6', 'TMPRSS3', 'HEPHL1', 'DIP2B', 'OR10H5', 'DBNDD2', 'SNX25', 'GALNT12', 'C8ORF22', 'EMP1', 'FAN1', 'NAGS', 'NR1I2', 'GPR82', 'FASTKD3', 'VNN1', 'SEC61A2', 'COX8A', 'MAP1A', 'METTL9', 'SSH1', 'FAM72B', 'ATP5E', 'GKN2', 'OR4F21', 'NSUN2', 'IL18RAP', 'GJA8', 'HSPA1B', 'COX4I2', 'LRRC30', 'OR4A15', 'NKX3-1', 'PLXNB2', 'PTS', 'HYAL1', 'GPR153', 'CEP295', 'SNHG3', 'RC3H1', 'RCN2', 'TSHR', 'RRP8', 'CPT1B', 'QPRT', 'ZBTB11-AS1', 'DPPA4', 'ASL', 'PCBD2', 'GCNT3', 'BMP2', 'ANKRD29', 'FAM179B', 'PPP1R8', 'DYNLL2', 'HIST3H3', 'FAM228A', 'NUDT13', 'IGF2-AS', 'CFAP20', 'TRIM37', 'TIGD7', 'IAH1', 'WDR25', 'PTTG2', 'FAM157A', 'GFRAL', 'LOC283332', 'NOX1', 'HIST1H1B', 'NFIA', 'EVI2A', 'CNNM4', 'OTUD7A', 'KCNH8', 'TAPT1', 'C11ORF53', 'TBX21', 'KIF2A', 'GALR2', 'NRSN1', 'C1ORF159', 'TMC8', 'OVCA2', 'ZNF860', 'PDCL3P4', 'NOM1', 'ATP6V1G2', 'USP6NL', 'TPP1', 'TRAPPC6A', 'NDP', 'LINC00934', 'SLC7A5', 'PDP1', 'SERPINI1', 'WSCD1', 'ACADVL', 'RUNDC1', 'HMHB1', 'G0S2', 'LOC340357', 'ARL5A', 'FREM2', 'SHARPIN', 'OIP5-AS1', 'CEP95', 'LMNA', 'FRYL', 'METRNL', 'OR2W1', 'PADI4', 'ACYP2', 'FAM149B1', 'SEC24D', 'HKR1', 'SLC11A2', 'HABP2', 'CPEB4', 'ATP9B', 'TWIST1', 'IL7R', 'MTIF2', 'IFITM4P', 'KLHDC2', 'GNAS', 'CNNM1', 'HGS', 'GYS1', 'TFE3', 'ZNF568', 'BDH2', 'BMP8B', 'GPR31', 'SUMF2', 'TECPR2', 'GPX2', 'NSUN5P1', 'NXT2', 'NTRK2', 'LRRC20', 'PEBP4', 'COL1A2', 'RAB33B', 'DHX9', 'ANAPC7', 'GPRC5B', 'LINC00029', 'SNX4', 'TK1', 'LINC00152', 'ZNF7', 'RPL6', 'RPL13AP3', 'PDE6G', 'PCBP2', 'FLJ13224', 'ARHGAP19', 'FAM8A1', 'FOXN2', 'HSD3B7', 'KBTBD8', 'ZFP41', 'CCDC88C', 'SLC8A3', 'COX19', 'OLFM2', 'GNPDA1', 'ATP10D', 'C1QC', 'THBS3', 'LOC441454', 'TULP1', 'LINC00887', 'STAB1', 'B3GNT8', 'MFNG', 'FAM155A', 'ZBTB48', 'AK9', 'WDPCP', 'RBM12B-AS1', 'SNRNP25', 'CCDC106', 'PTGER1', 'ZNF813', 'INPP1', 'INAFM1', 'CCR9', 'DBT', 'GATA3', 'HIST1H1C', 'PPP6R2', 'CPN2', 'LOH12CR1', 'SLC39A1', 'TDRD10', 'C15ORF62', 'AP1S2', 'GAB4', 'ZNF346', 'SLC41A1', 'NCAPD3', 'RPS26P11', 'LOC644936', 'MAPRE3', 'LSM11', 'WRB', 'PSMD11', 'CYP4F12', 'FAM122C', 'ATP7B', 'PRSS35', 'ZSCAN21', 'MILR1', 'ELOVL2', 'TNFSF13', 'LKAAEAR1', 'KRTAP5-7', 'SUPT20HL2', 'INTS10', 'KLF4', 'PER1', 'DNAJC14', 'FAM86C2P', 'SGMS2', 'PCCB', 'IVD', 'IK', 'EPS8', 'A2M', 'CHRNA4', 'ARHGAP10', 'TCP1', 'PPARGC1B', 'DEFB109P1B', 'SMCO2', 'PPIP5K1', 'ALCAM', 'DNAJC18', 'FBXO34', 'LIN7B', 'GLTSCR1', 'KLC2', 'JAG2', 'RPP25L', 'NUP160', 'C19ORF18', 'NACC1', 'ZNF844', 'TMEM218', 'DEFB104A', 'ZFP37', 'SRSF2', 'CALCOCO2', 'PARL', 'IL6ST', 'CBX5', 'CSNK1G1', 'SYT8', 'ACAA2', 'AP1M2', 'PIR', 'SPEF1', 'TSPAN8', 'GPX6', 'MAGEE1', 'PSMB2', 'CRHR1', 'SSX5', 'AGAP6', 'PXT1', 'CEBPA', 'ARMC6', 'CASQ1', 'RIPK1', 'TMC6', 'FAAH', 'ACBD5', 'OPRL1', 'STAG2', 'KRTAP10-6', 'TMEM136', 'PPIL3', 'GATAD2B', 'SLC9A6', 'DEPDC1', 'LINC00999', 'BPGM', 'GANC', 'MADCAM1', 'TMEM132C', 'SMG1P2', 'GOLGA6L9', 'C9ORF47', 'LMO2', 'CLDN18', 'TIPIN', 'TRMT10A', 'WDR62', 'YJEFN3', 'TRIP6', 'CD63', 'TRIM34', 'DLG1', 'SLC25A30', 'FAM110C', 'UBR4', 'ZDHHC7', 'TEX33', 'TMEM74', 'NR5A1', 'ATP4B', 'IGDCC3', 'OR6B2', 'TCEA2', 'KLHDC7B', 'LINC00094', 'C9ORF78', 'PPIE', 'SCGB1B2P', 'PTCHD4', 'CNIH3', 'OR6Y1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.951186126694601 Spearman Correlation: 0.8518177115870632 Coefficient of Determination: 0.9047550476160989 RMSE: 0.16122903595504975 NRMSE: 0.038909437448427675 MAPE: 34.82007860144072 Pearson Correlation: 0.3831318371017362 Spearman Correlation: 0.22400528684896326 Coefficient of Determination: -1.6246408066257585 RMSE: 0.5911467035120221 NRMSE: 0.25750172213791966 MAPE: 100.24861671643481 Predictor: ElasticNet Pearson Correlation: 0.8863735964612316 Spearman Correlation: 0.7467800977124818 Coefficient of Determination: 0.7786713890173935 RMSE: 0.24577689421742602 NRMSE: 0.059313390017961244 MAPE: 54.96372303563122 Pearson Correlation: 0.7225319459040919 Spearman Correlation: 0.5685831494158281 Coefficient of Determination: 0.5037198223345406 RMSE: 0.25705366379373784 NRMSE: 0.11197180110368857 MAPE: 72.99527495547886 Predictor: RandomForests Pearson Correlation: 0.8635627704284753 Spearman Correlation: 0.7276248245249366 Coefficient of Determination: 0.7421621470743596 RMSE: 0.2652745647932856 NRMSE: 0.0640187669940598 MAPE: 55.896775821412824 Pearson Correlation: 0.7775539258317742 Spearman Correlation: 0.6687272294267909 Coefficient of Determination: 0.5503423903676223 RMSE: 0.24468159759725702 NRMSE: 0.10658256636200593 MAPE: 78.4938093699756 Protein: CCND1 x_train_column_count: 859 x_train columns: ['SIRT6', 'HEATR3', 'FOXO3B', 'CBR1', 'LRIG2', 'SHQ1', 'DERL3', 'PVR', 'SPZ1', 'NUDT2', 'FAF2', 'KIN', 'FGF1', 'DYM', 'PIP5KL1', 'CDCA8', 'TRABD', 'LOC100190986', 'SPATA20', 'SNORA32', 'SNORA66', 'RMRP', 'POLD1', 'PIH1D1', 'ASAP2', 'ZNF549', 'MFSD2B', 'TIGD7', 'DMXL2', 'SH3PXD2A', 'OR7A10', 'PRAMEF11', 'RPS29', 'CLUL1', 'APP', 'WFIKKN2', 'PMM1', 'PODXL2', 'CRNKL1', 'KCMF1', 'TAF1C', 'HDDC2', 'TRIM77', 'BIRC8', 'HIST1H3G', 'PDE1C', 'CCR3', 'GRIP2', 'PCNAP1', 'ZSCAN30', 'FCRLA', 'SEZ6L2', 'XPO5', 'TANK', 'L3MBTL2', 'SPP2', 'GOLPH3L', 'CCNL1', 'QRICH2', 'PCNXL3', 'SEC23IP', 'TOPORS', 'RPL38', 'INPP5A', 'FBXO5', 'HAUS6', 'ZNF446', 'FADS6', 'GTDC1', 'SERPINB11', 'PTPRU', 'SPINK2', 'AEBP1', 'CDHR3', 'ELMOD1', 'TRAPPC2L', 'ENTPD2', 'RNASEH2B', 'ETFDH', 'RPS10', 'RECQL5', 'ZNF292', 'P2RY2', 'COLCA1', 'ATP5H', 'DGCR5', 'SNAP25', 'MSLNL', 'PTP4A1', 'IMPA2', 'TBC1D24', 'PABPC1P2', 'LY9', 'GAL', 'USP13', 'MRPL36', 'HRSP12', 'ZCCHC5', 'TMEM150B', 'RP9', 'MGST2', 'DLD', 'ZNF296', 'RXRB', 'CD59', 'SLC38A9', 'CLDN7', 'TRIM38', 'GSTT1', 'GNG7', 'IL3', 'EIF3J', 'TMED3', 'SRP68', 'C8ORF22', 'DCP2', 'GTSE1-AS1', 'GABRG1', 'RALGAPB', 'PALMD', 'OR5V1', 'MRS2', 'PRKRIP1', 'AQP1', 'GOLM1', 'TOLLIP', 'PPP1CC', 'IKZF1', 'KHDRBS2', 'BNIPL', 'APOL5', 'PLXNA4', 'IFT27', 'RNF167', 'BRICD5', 'PEF1', 'NXPE4', 'SFT2D2', 'CCBL1', 'ITGA3', 'RSPO1', 'KIAA1715', 'KDELR2', 'NDRG3', 'LINC00319', 'DUSP15', 'RHAG', 'SLC41A2', 'SLCO1B7', 'HELT', 'SS18', 'PAPOLG', 'ADRA2A', 'PRB2', 'EHMT1', 'VPS13A', 'CLDN16', 'RSC1A1', 'MT1M', 'LMX1A', 'EIF1AD', 'ZNF667', 'MARK2', 'GALR3', 'SULT1A3', 'CDC7', 'LRRC30', 'CREBL2', 'C7ORF49', 'MAD2L2', 'TSNAX-DISC1', 'NT5C1B', 'MAPK1IP1L', 'GDF6', 'EPHA10', 'LOC284379', 'GGCT', 'ZKSCAN7', 'ANP32A', 'C1ORF21', 'EXOSC2', 'TMEM45B', 'PSPC1', 'SAMD12', 'SLAIN1', 'VENTXP1', 'CCDC18', 'LIPC', 'CLDN4', 'CT62', 'AFF4', 'CACTIN', 'WDR54', 'NEURL1', 'IGSF3', 'CSTB', 'OXA1L', 'RNF217', 'STRN', 'MMP3', 'ZSWIM8', 'CGREF1', 'PCOLCE', 'BIRC6', 'RPE', 'VSTM4', 'CLLU1', 'GEMIN2', 'POT1', 'NUDT5', 'DHRS11', 'CDK11B', 'LIN28A', 'CCDC64B', 'ERP29', 'KRTCAP2', 'LONRF3', 'GLT1D1', 'SH3GLB2', 'NGF', 'SPTLC2', 'CARD16', 'SNORA11B', 'ZFHX4-AS1', 'SORBS2', 'TMEM203', 'GCFC2', 'MTIF3', 'HIGD1B', 'ZNF639', 'ZNHIT6', 'NCOA5', 'SPDYE5', 'NR2E3', 'CTAG1B', 'SLC9A7', 'ZDHHC22', 'RIMKLB', 'OR10X1', 'TIMMDC1', 'ASTL', 'RSPH6A', 'RARS2', 'EVA1C', 'TPM3P9', 'RAB31', 'NCOA6', 'MAEA', 'KIAA1024', 'POLD4', 'FBXO25', 'C10ORF11', 'SEC22A', 'MUSK', 'PPM1D', 'C3ORF14', 'ABHD17A', 'DUSP3', 'GPLD1', 'HYOU1', 'ZSCAN16', 'EMX2', 'OR7G2', 'C10ORF62', 'AUP1', 'NFATC2', 'STON2', 'REST', 'ESF1', 'AXIN2', 'EPOR', 'CHMP5', 'WISP2', 'TFPI2', 'PRB4', 'RBFA', 'TBR1', 'TIA1', 'ZNF816', 'CELF6', 'SHANK1', 'HSP90AA1', 'ABCC5', 'SBF1P1', 'LUZP4', 'ARID5B', 'ISG20L2', 'EIF4B', 'CRYL1', 'PRAMEF4', 'TBC1D10B', 'HECTD1', 'MED29', 'OR4K14', 'SLC3A2', 'ZNF480', 'SPANXN4', 'XRRA1', 'TROAP', 'MEX3A', 'IL1RN', 'ANKLE1', 'C3ORF33', 'DAP', 'CD84', 'SV2C', 'HOMEZ', 'DOC2B', 'EDEM1', 'ID2', 'GGTLC1', 'GPR176', 'TPD52L3', 'DDO', 'LOC441204', 'CHERP', 'MRPL3', 'CLEC17A', 'LY6H', 'ID1', 'INTS4', 'FAM90A7P', 'FASTKD2', 'LSMEM2', 'LOC284632', 'SLC17A1', 'SYNPO', 'AUTS2', 'TMEM19', 'ZMIZ1-AS1', 'FBXO10', 'EPB42', 'C10ORF55', 'CD44', 'MBNL3', 'ACER1', 'PRR23C', 'TM4SF19', 'HMX1', 'RPS10P7', 'PEX14', 'RINT1', 'CDX4', 'ZDHHC4', 'NCOA1', 'LMCD1', 'OR7C1', 'H1F0', 'ACSL5', 'APOE', 'TMEFF2', 'LOC100272216', 'TEX26', 'ZFHX3', 'HSPD1', 'EFCAB5', 'ATXN7L1', 'AKAP1', 'RAD1', 'DYRK1B', 'SIGLEC11', 'GPAM', 'CCL27', 'ZCCHC9', 'HOXA3', 'CCDC159', 'ALMS1', 'DNAJB9', 'TBL1Y', 'TBC1D2', 'DGKZ', 'SREK1IP1', 'NFYC', 'COPS7A', 'LYPLAL1', 'SCN5A', 'TMLHE', 'FAM127A', 'RBBP7', 'CDH11', 'POLH', 'CDC42SE2', 'PTPN3', 'MARVELD2', 'LRMP', 'ABTB1', 'RPS15A', 'OGFR', 'POLK', 'RIOK2', 'BLOC1S3', 'GKN1', 'NECAB2', 'CCDC169', 'ZNF532', 'TUBB4A', 'VTI1B', 'PNKD', 'TRIM37', 'RPL9', 'NKAIN4', 'PRMT5', 'SCN4A', 'OR11H6', 'ADAT1', 'BDP1', 'PRKG2', 'ACVR2B-AS1', 'SIGLEC1', 'ZNF430', 'OR8G2', 'PLOD3', 'HIPK2', 'CHMP2B', 'MATN1', 'COA1', 'CGN', 'CSNK1A1P1', 'H2AFY', 'TDRD9', 'ENOX1', 'PLCB2', 'PPIL6', 'IGF2BP2', 'ZNF699', 'HMGN3', 'UBXN2A', 'PCBP3', 'CRYGS', 'MPND', 'IFNA16', 'C9ORF72', 'ANP32AP1', 'LFNG', 'SERPINA11', 'NEU3', 'RBAK', 'TECTB', 'PPP1R12A', 'PATE2', 'PPP1R7', 'SEMA6C', 'SLC27A1', 'C19ORF60', 'CCL20', 'PM20D1', 'TRIM64', 'ZNF703', 'CYP4F3', 'LRRIQ1', 'SCARNA23', 'RTN4RL2', 'ATP8A1', 'ZDHHC17', 'ZNF595', 'TSEN15', 'EPPK1', 'CRIPAK', 'ZNF709', 'IST1', 'MET', 'LBR', 'UBE2L6', 'BCL2L11', 'SMIM10L2B', 'GPIHBP1', 'ZDHHC13', 'SLC12A9', 'GPR39', 'PGBD5', 'CLIP2', 'ZNF266', 'TBC1D3B', 'DUT', 'NINL', 'GDI2', 'PMS2', 'ST6GALNAC3', 'CCDC181', 'CEP76', 'USP30', 'LUZP2', 'B3GALT5', 'MICALCL', 'NNAT', 'GPR55', 'FAM222B', 'SKP2', 'ZNF350', 'PCSK1N', 'RPL10L', 'ASB7', 'CRB1', 'ACOXL', 'MPHOSPH9', 'TNFSF10', 'SIPA1L1', 'LCE1D', 'TRPC2', 'UCN3', 'ZNF354B', 'TTLL8', 'FAM72A', 'STH', 'SPEN', 'GABRB3', 'NLGN4Y', 'TBX5', 'OR6K6', 'AFAP1', 'BCL2A1', 'ZNF664', 'MMRN1', 'OR4D5', 'PIGR', 'ZAR1L', 'PCBP1', 'GAGE4', 'B4GALT3', 'SNORA11', 'MGAM2', 'C8ORF31', 'DNAJC18', 'PLEKHA8', 'LOC100130331', 'MAN1C1', 'UTP3', 'TRIM51', 'CD93', 'GPD1', 'LOC643923', 'ZNF461', 'KDSR', 'PPOX', 'RALGPS1', 'N4BP1', 'ZNF341', 'STYX', 'TNC', 'SLC1A5', 'BCL2L1', 'PIP', 'RCCD1', 'AADACL4', 'TAS2R39', 'C19ORF66', 'COQ10A', 'PTAFR', 'DUSP4', 'PRR7', 'PEBP1', 'OR11L1', 'OR9I1', 'ERG', 'FOXB2', 'CNP', 'ITGB7', 'NKAPL', 'SOHLH2', 'LARS', 'STAC', 'RPL3L', 'ATP6V1G3', 'TCAIM', 'ZNF442', 'NOP16', 'OR11H12', 'DNHD1', 'NOTCH4', 'SSX5', 'ZNF543', 'ZNF440', 'AAAS', 'KRTAP5-6', 'HMP19', 'SNORA58', 'MGAT5', 'CREG2', 'LCMT2', 'PRPF8', 'SYCE1L', 'GPR89B', 'UNQ6494', 'WDFY3-AS2', 'COL24A1', 'CIAO1', 'DEFB108B', 'AKAP10', 'ARHGAP28', 'SLC17A8', 'CPE', 'KIAA1551', 'ZNF705D', 'ABCA17P', 'RHBG', 'MVP', 'CRX', 'ABHD1', 'KRTAP2-2', 'TMEM236', 'LAMP2', 'SPATA4', 'SYCP3', 'SEPT14', 'PPIF', 'GTF3C4', 'TSC22D2', 'MOB3B', 'WDR18', 'BAZ2A', 'C9ORF106', 'ZNF160', 'UBN2', 'KLHL3', 'GLRA1', 'OR9K2', 'SCN1A', 'ZNF670', 'PSMB5', 'MMP23B', 'SPECC1', 'ZNF679', 'TRIM74', 'ASAH2B', 'ASCC2', 'C20ORF202', 'ANKRD20A20P', 'FLT3', 'MLANA', 'TRIM71', 'TBRG4', 'MKI67', 'SUMF1', 'BACE1', 'SHD', 'C22ORF29', 'ZMYM6', 'LTC4S', 'SPATA5L1', 'PEX12', 'TRIO', 'PTTG2', 'C9ORF129', 'RDH11', 'FAM26F', 'DAW1', 'WNT3A', 'OPALIN', 'GCC2', 'ADAMTSL2', 'ALCAM', 'CGA', 'EIF4A2', 'C3ORF52', 'SCTR', 'ZNF540', 'MRPL35', 'SPATA24', 'HINT2', 'C4BPB', 'GBP4', 'SKP1', 'LOC100128239', 'MYO3B', 'SMCO2', 'FH', 'MMP10', 'CSHL1', 'SNN', 'B3GAT2', 'FXYD4', 'SMPDL3A', 'C1ORF198', 'ACVR1', 'MNS1', 'SDHAF2', 'FAM65C', 'STOX1', 'DCTN4', 'C1ORF68', 'OR11H4', 'SLC35F2', 'OR52A1', 'GOLGA6C', 'NUP210', 'APTX', 'GPC3', 'ASTN2', 'TRIM35', 'MIR17HG', 'TAC4', 'DBN1', 'PLEKHJ1', 'VWCE', 'APC', 'USE1', 'TSPO2', 'MUSTN1', 'EFEMP2', 'ERF', 'UBE2D3', 'TPT1', 'CCM2', 'RNF182', 'C14ORF39', 'SNORA45B', 'AIDA', 'EDC4', 'TTC28-AS1', 'CAPN14', 'PRRX2', 'PTPN9', 'TBPL1', 'MROH6', 'EIF4EBP1', 'XPO4', 'RPL8', 'LCE2B', 'AMIGO2', 'EID3', 'PIP5K1C', 'RPL32P3', 'NFAT5', 'SSUH2', 'ERBB2', 'RRBP1', 'ZNF335', 'SNX11', 'H2BFXP', 'RAB24', 'NR1H2', 'SHC4', 'LOC606724', 'FZD9', 'CWC27', 'CSMD2', 'STPG1', 'GLIS3', 'ETV4', 'LINC00626', 'SVEP1', 'DPH2', 'CDX1', 'PDZD7', 'FBXO47', 'CATSPER2', 'ASPHD2', 'TUBAL3', 'ZNF772', 'MSX2P1', 'VCAM1', 'RAB4A', 'NGLY1', 'LINC01098', 'OR51F2', 'ADCY10', 'AKR7A3', 'MVB12A', 'AKIP1', 'APEX2', 'KCNJ2', 'SGPP2', 'GORASP2', 'INPP5E', 'TMEM254', 'LCE3A', 'COL10A1', 'ELP6', 'TMEM189-UBE2V1', 'OTC', 'ESPNL', 'STAG3L3', 'TXNRD2', 'SECTM1', 'PLXDC1', 'ITGAM', 'VPREB1', 'CHP1', 'LINC01555', 'VWA2', 'OR10A3', 'C1QTNF1', 'FGF21', 'CD300E', 'REG1B', 'NR6A1', 'C2ORF16', 'FAM46A', 'KIF1C', 'POM121C', 'NSUN5', 'UGT1A1', 'SNORD116-19', 'FAM50B', 'LOC154449', 'AMOTL1', 'PUS7', 'STX5', 'CORO2A', 'TBRG1', 'TBXA2R', 'MAF', 'BPIFC', 'OXER1', 'TOX4', 'CEP70', 'CNKSR3', 'FAM183B', 'RUNDC1', 'KIAA1468', 'OLFML3', 'CEP83-AS1', 'SGCD', 'LAMB2P1', 'RBM48', 'CTNNAL1', 'TRIM55', 'PTTG1', 'MMP23A', 'ART3', 'USP53', 'LIN52', 'MT1B', 'FGF9', 'EXO1', 'SETBP1', 'ADAMTS14', 'IFT52', 'POLR3G', 'SERPINE1', 'OR1A2', 'OSER1', 'ADAM29', 'C16ORF96', 'ELFN2', 'PRR21', 'DZANK1', 'EXOC3', 'CBLL1', 'C11ORF73', 'PMS2P2', 'GABARAPL2', 'GOSR1', 'LRFN4', 'SPATA3', 'PLSCR3', 'KRTAP12-3', 'OR6X1', 'AFP', 'ARRB1', 'ZMYND11', 'LINC01312', 'PACRG-AS1', 'FAM206A', 'PPIAL4D', 'NOL3', 'STK35', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 9.559933046050552e-16 NRMSE: 5.747155286127709e-16 MAPE: 2.7410838678988314e-12 Pearson Correlation: 0.20187260837403095 Spearman Correlation: 0.14423870621828203 Coefficient of Determination: -2.5462909325760874 RMSE: 0.394973171098354 NRMSE: 0.3742650840006007 MAPE: 793.7326197386473 Predictor: ElasticNet Pearson Correlation: 0.7046565050179879 Spearman Correlation: 0.681767353808155 Coefficient of Determination: 0.444791028174791 RMSE: 0.182299195844777 NRMSE: 0.10959300467998281 MAPE: 466.0880236560377 Pearson Correlation: 0.2913513659704539 Spearman Correlation: 0.2716318158580531 Coefficient of Determination: 0.06797864058089276 RMSE: 0.20248522950606995 NRMSE: 0.191869111563274 MAPE: 322.6336608950746 Predictor: RandomForests Pearson Correlation: 0.5808727410002117 Spearman Correlation: 0.5594139663111813 Coefficient of Determination: 0.28734395257553513 RMSE: 0.20653635232278972 NRMSE: 0.12416368224669039 MAPE: 490.5834570725337 Pearson Correlation: 0.38051537106466315 Spearman Correlation: 0.358430903128468 Coefficient of Determination: 0.1350990153137389 RMSE: 0.1950579303090732 NRMSE: 0.1848312189638058 MAPE: 320.3240178959858 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['TCEB3C', 'TP53AIP1', 'CLEC3B', 'TMEM2', 'PABPC1P2', 'WDR12', 'SRR', 'KHNYN', 'TMEM209', 'SCEL', 'SERPINA9', 'DHX9', 'ATP2B4', 'OPN5', 'CCL13', 'VAMP7', 'UBAP2', 'TAF6L', 'ADAM21', 'TYMS', 'HDAC5', 'SLC6A19', 'GRSF1', 'TAF2', 'AWAT1', 'CCNB3', 'CWF19L2', 'RNU4ATAC', 'BRAT1', 'ZNF485', 'EDA', 'SCP2', 'LINC01341', 'SBK1', 'UNC5C', 'OR6N1', 'POLD2', 'ID1', 'LRRC66', 'RENBP', 'PIGY', 'IPO8', 'USF1', 'GRIN1', 'C12ORF49', 'NUSAP1', 'PABPC1L2A', 'FAM135A', 'VAMP5', 'COMMD8', 'USP4', 'HTATIP2', 'MRPL52', 'ZRANB1', 'EIF3E', 'PTPN4', 'SLCO3A1', 'RPL19P12', 'UNC79', 'ANKRD36BP1', 'ANGPT2', 'MED25', 'GPR160', 'CACNA1C', 'HSF5', 'DACH2', 'CDKN1C', 'TXNDC11', 'PHF10', 'MYDGF', 'TMEM186', 'URM1', 'SNAP91', 'SLC43A2', 'NUGGC', 'ATP6V0B', 'PRDM5', 'CENPC', 'MORN4', 'INTS8', 'COL15A1', 'SPAM1', 'MFSD3', 'PTAR1', 'ZNF800', 'CD4', 'HIPK4', 'MCF2L', 'DIMT1', 'ZNF207', 'PTGFRN', 'FAM163B', 'SERINC2', 'CASC2', 'KRT33B', 'THEM4', 'C3ORF38', 'MYH14', 'P2RX7', 'COL4A5', 'LRRC4', 'LILRA6', 'ZNF75D', 'SOD2', 'FAM99A', 'KATNA1', 'CLEC10A', 'RCE1', 'ADAL', 'UBE2D4', 'LDOC1', 'ZDHHC9', 'GTPBP10', 'RNF8', 'AAAS', 'POLR3G', 'SELK', 'C9ORF3', 'KLHL8', 'TAF1D', 'RRP15', 'LAS1L', 'ABCF3', 'SF1', 'NPB', 'OR9Q1', 'PRPS1L1', 'FOXL1', 'DDI2', 'FBXO6', 'NMBR', 'AASDHPPT', 'FRY', 'IFI30', 'CNPY3', 'PRR4', 'TSEN2', 'HOXB1', 'CKAP2L', 'NLGN2', 'CCDC77', 'MCF2', 'YIPF3', 'PRR23B', 'CPEB3', 'ANXA2', 'GPR27', 'PMS2P4', 'PRKAR2B', 'POTEE', 'PAGR1', 'CYB5RL', 'ABHD11-AS1', 'ZBTB2', 'CCL1', 'PCLO', 'RPL22L1', 'SPHK2', 'PRPF38B', 'ZNF846', 'OR6C4', 'NXPE4', 'LINC01138', 'LY86', 'MKX', 'CTSD', 'CRYBB2', 'DKFZP434L192', 'RELL1', 'CENPBD1', 'PLLP', 'DCAF8L2', 'PHF13', 'INSIG1', 'MIEN1', 'PPFIA2', 'SLC39A9', 'CDK5', 'METTL25', 'CBX1', 'HIST1H3C', 'FAM72B', 'RALGPS1', 'CABLES1', 'FANCF', 'TTC8', 'ADRBK1', 'TKTL1', 'TCN1', 'GNG5', 'ZNF91', 'DDIAS', 'LINC00442', 'NEURL1', 'UQCC3', 'NLRX1', 'XPO1', 'LINC00238', 'ADAM20', 'RASSF6', 'TRIO', 'SLIRP', 'BRI3BP', 'CDCA3', 'PP2D1', 'TRAPPC11', 'IFNA16', 'RHOXF1', 'NAP1L2', 'C20ORF202', 'LMNTD1', 'TIMM10B', 'ELFN2', 'LOC145845', 'UBE2W', 'WWC3', 'FASN', 'CCDC62', 'UBA7', 'NBEAL1', 'PROM1', 'POLD3', 'BAIAP3', 'TEAD4', 'SERPING1', 'DCLK2', 'LOC146880', 'VBP1', 'TNFSF14', 'ATL2', 'TACC3', 'OR51T1', 'NR2F1', 'FAM179B', 'LINC01001', 'DDX11L2', 'ZNF878', 'STAT4', 'PIN1P1', 'C10ORF91', 'RPL22', 'DDB1', 'KLHL17', 'ACSM4', 'SKOR1', 'LMO3', 'MYO1D', 'B4GALT3', 'PLS3', 'FAM181A', 'MTMR11', 'CYP3A4', 'KANSL1', 'KAZALD1', 'PLP2', 'TXLNB', 'METTL21C', 'HYPK', 'CA5B', 'CBWD1', 'GAS2', 'TUBA4B', 'WIPF1', 'RAD52', 'FBP1', 'NOP9', 'SOWAHD', 'LAG3', 'SPAG11B', 'OR1J1', 'RAB21', 'INE1', 'CT62', 'HOOK2', 'CCDC7', 'ZNF771', 'IDUA', 'DDX59', 'NHLRC4', 'TCEAL4', 'CCNE1', 'MMP10', 'NUP205', 'THOP1', 'KIAA1211L', 'OR51E1', 'RPE', 'RAB11A', 'TMEM69', 'TMEM126B', 'PIAS1', 'LINC00426', 'CELF3', 'SH3BGRL2', 'NOD1', 'CTU1', 'ATP8A1', 'FUT7', 'RPL26L1', 'NCK1', 'GNGT2', 'SLC38A10', 'EIF3B', 'YBX2', 'COX7C', 'TRIP10', 'BEND5', 'UGT1A3', 'LACC1', 'FABP3', 'ERICH5', 'NPM2', 'VPS8', 'PSMA1', 'DEFB119', 'SLC25A41', 'NBPF7', 'STRN', 'PGA3', 'PPP2R5A', 'GOLGA2P3Y', 'DUOX2', 'PRSS33', 'ABHD4', 'PLCH1', 'RAB9B', 'CKS2', 'CDKL4', 'GBX1', 'PDCD5', 'FAM86JP', 'NPVF', 'RIN3', 'LGALS9B', 'NCAPG2', 'RASIP1', 'RRBP1', 'KRTAP15-1', 'DMBT1P1', 'SMS', 'LOC341056', 'GCG', 'TGFBRAP1', 'CDK3', 'PLAC1', 'TAF5L', 'SNORD116-4', 'HSD17B2', 'OR4M1', 'SPATA22', 'TMEM168', 'BOP1', 'ATP13A4', 'GABARAPL2', 'PASD1', 'FETUB', 'CRHBP', 'ALX3', 'KLRAP1', 'IL12B', 'PRLR', 'TPM2', 'RHOD', 'HNRNPU-AS1', 'MAST3', 'TAF9B', 'SYF2', 'TAS2R3', 'DRG1', 'WDR7', 'YPEL2', 'SNRPGP15', 'MATN2', 'TIGAR', 'MAPK9', 'FBXO39', 'GJD4', 'RBBP5', 'FUK', 'AOX2P', 'C11ORF24', 'ALDH1L1', 'AIPL1', 'SOX7', 'PRO0628', 'ISG20', 'DUSP27', 'SLC38A1', 'ZNF354A', 'PHLDA3', 'EGFL7', 'TUBA3FP', 'SH3D21', 'ANKAR', 'CEP76', 'MRPL48', 'TTC27', 'RPL32P3', 'BCDIN3D-AS1', 'GINS4', 'SAMD11', 'RALGAPA2', 'GNAI2', 'PIK3AP1', 'KDR', 'SPTLC1', 'LRRC43', 'ZNF655', 'SLC25A38', 'POLR2F', 'ATPIF1', 'WBSCR22', 'UNK', 'GPR89B', 'CCNI2', 'KLHDC8B', 'CTAGE4', 'ELAVL1', 'LDHD', 'C8ORF4', 'GGT5', 'LCE1C', 'WSCD1', 'CHMP2A', 'LINC00632', 'LDLRAD2', 'UCN2', 'SHMT1', 'LRRC55', 'CYP8B1', 'EHD4', 'MAP4K1', 'TMCO6', 'NUBP1', 'SESN3', 'OPRL1', 'NAA10', 'ACRV1', 'AADAC', 'LRP11', 'H6PD', 'WDFY1', 'ZNF71', 'NUP43', 'PCTP', 'HNRNPK', 'ADGRA2', 'FAM156A', 'HEY2', 'HIST1H1C', 'DNAJB8', 'EML4', 'MROH2B', 'LOC645166', 'DCANP1', 'CLEC1B', 'AQP9', 'KCTD17', 'ARHGDIG', 'B4GALNT1', 'SLC37A4', 'GNAZ', 'PROKR1', 'PCDH9', 'SS18L1', 'OXNAD1', 'AGAP2-AS1', 'RSPH4A', 'SHCBP1', 'ALLC', 'KRT20', 'STX11', 'GSTZ1', 'MED19', 'VAT1L', 'LINC00620', 'HIRA', 'SUCLG1', 'OR10X1', 'PAN3', 'GNG4', 'DBP', 'BRF1', 'PADI4', 'DLX5', 'ACTL7A', 'SNORA65', 'TTYH2', 'LOH12CR2', 'HLA-DQB2', 'FAM21A', 'SLC16A1', 'APOBEC4', 'RNF115', 'PHGDH', 'LOC391322', 'ZNF614', 'PIGW', 'AMN', 'P2RX1', 'LARP1', 'C7ORF62', 'HRAS', 'CDK15', 'TAS2R46', 'MSMB', 'LOC606724', 'MIR4697HG', 'ZNF772', 'OR56A4', 'CLEC4M', 'SPINK2', 'PPP1R16B', 'MTNR1A', 'VIL1', 'CAND2', 'SH2B1', 'SELE', 'C20ORF27', 'ZNF117', 'OR5C1', 'DHFR', 'CACFD1', 'CNKSR2', 'NXF5', 'PSMD5-AS1', 'NRN1L', 'TMPRSS4', 'C3ORF35', 'HMX2', 'WDR3', 'SLC39A1', 'SEZ6', 'XIAP', 'ZYX', 'SST', 'CLEC17A', 'C8ORF82', 'DOLK', 'SNED1', 'GOLGA8F', 'C1RL', 'NODAL', 'PRB1', 'FGF13', 'SPNS1', 'TATDN2', 'MAP2K3', 'OMG', 'FOXJ2', 'ZFPL1', 'LMNTD2', 'TNFRSF1B', 'STRADA', 'UCKL1-AS1', 'NAPEPLD', 'ZNF703', 'B9D1', 'LCA5L', 'ZNF570', 'PNLIP', 'MIA2', 'SERAC1', 'OTUD6B', 'SRP72', 'WBSCR16', 'CRBN', 'ANKEF1', 'PIANP', 'TIMM17B', 'QPRT', 'HOPX', 'CDHR4', 'TUBGCP2', 'DDX49', 'ZNF304', 'PAFAH1B1', 'PKIB', 'ANKRD31', 'C12ORF29', 'C6ORF48', 'RNASE12', 'EFCAB12', 'BAG4', 'PPP5C', 'ST6GAL1', 'CHID1', 'ZNF484', 'RPH3A', 'NDUFS7', 'NAA25', 'LOC728323', 'SMARCAL1', 'YWHAH', 'TP53INP2', 'HMSD', 'ERLIN2', 'PIGA', 'TP53INP1', 'C14ORF166', 'CENPF', 'TMEM132B', 'MAD1L1', 'GREB1L', 'CASC3', 'MUM1L1', 'LOC653786', 'CHI3L1', 'SNCB', 'DNAJC15', 'HES7', 'EPB41L3', 'PDK4', 'COA3', 'CRYBA1', 'MAFB', 'POLB', 'MFF', 'NOB1', 'MAP1A', 'TTC28-AS1', 'VCX3B', 'KPNA5', 'DERA', 'FHL5', 'OR4D5', 'TSEN34', 'IGSF9', 'KLF11', 'PDE7A', 'POLR2J2', 'SERINC4', 'FAM127A', 'CD9', 'YES1', 'RPL3L', 'ZC3H12B', 'MEX3B', 'MYBPHL', 'PAXBP1', 'ECI1', 'LOC285696', 'ISL1', 'C1ORF52', 'LMX1B', 'SPINT3', 'LCN6', 'KCNE2', 'CRIP3', 'TNFRSF11B', 'KCNK1', 'PLAGL2', 'CAMK1D', 'COQ10B', 'AIRE', 'PRIMA1', 'DTNBP1', 'GSC2', 'MVB12B', 'VPS13B', 'TM4SF4', 'CHODL', 'MTERF1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.049463175927752e-15 NRMSE: 5.195262408517901e-16 MAPE: 6.173127782348348e-12 Pearson Correlation: 0.5385062681539455 Spearman Correlation: 0.35377043824818116 Coefficient of Determination: -0.7326967108827818 RMSE: 1.4039087753009192 NRMSE: 0.2532485704778338 MAPE: 628.3618446287609 Predictor: ElasticNet Pearson Correlation: 0.9387981470684451 Spearman Correlation: 0.8703204375474993 Coefficient of Determination: 0.8730084250087948 RMSE: 0.34967170706699796 NRMSE: 0.059572330283830174 MAPE: 257.3380679833949 Pearson Correlation: 0.803534972420075 Spearman Correlation: 0.6462881660476677 Coefficient of Determination: 0.6209655786784947 RMSE: 0.6566242819221748 NRMSE: 0.11844726926945935 MAPE: 225.64897224192967 Predictor: RandomForests Pearson Correlation: 0.8425390058808301 Spearman Correlation: 0.6723000144793225 Coefficient of Determination: 0.7040240650728442 RMSE: 0.5338278649653675 NRMSE: 0.09094636267021611 MAPE: 519.0273006941983 Pearson Correlation: 0.8426110106001526 Spearman Correlation: 0.7230323026879516 Coefficient of Determination: 0.7085493763952246 RMSE: 0.5757846829961524 NRMSE: 0.10386475990261787 MAPE: 195.85515503924984 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['ZP2', 'RNASE7', 'KIF2B', 'VASP', 'MBD3L1', 'PCAT4', 'CXCL12', 'HOMEZ', 'TEP1', 'NIPAL3', 'C2ORF78', 'UBQLNL', 'SERINC5', 'SIGLEC10', 'C2', 'SELP', 'CD209', 'ARHGAP8', 'CYB561A3', 'ALDOA', 'NODAL', 'SMARCE1', 'EPHX2', 'TGFBR2', 'TCEB2', 'CSRNP2', 'TM6SF1', 'SERPINE3', 'ARPC4', 'CCDC66', 'HSFY1P1', 'RBM39', 'ORAI1', 'PARK7', 'EIF4EBP3', 'FAM129B', 'CPEB1', 'LOC100128239', 'TGFB3', 'SLC26A9', 'AGAP4', 'ARSK', 'C20ORF202', 'TTLL3', 'CDKN1B', 'NOP14', 'PON2', 'REG1A', 'RPE', 'CLRN3', 'PSG3', 'PDF', 'EPC2', 'SLC44A3', 'INGX', 'C1ORF52', 'FAM86C2P', 'DCHS2', 'CENPBD1P1', 'SHMT2', 'LIN37', 'ZC2HC1C', 'SERPINA7', 'CCDC91', 'MUC20', 'VGLL4', 'TPM3', 'SUCLG1', 'TSPAN7', 'KIAA1161', 'NUCB2', 'CPEB2', 'B3GAT1', 'ARHGDIA', 'ATPAF1', 'NDUFA6', 'NAPSB', 'KRT75', 'SLC23A3', 'ZNF454', 'EGFL7', 'FAM90A7P', 'GLB1L2', 'OR1G1', 'IFNW1', 'RASGEF1C', 'RAD52', 'PPID', 'CAST', 'CPEB4', 'ZNF542P', 'OPLAH', 'OR6C2', 'FAM104B', 'NFU1', 'ZNF175', 'SNORA22', 'CIDECP', 'CCDC60', 'OR6M1', 'TPP2', 'POSTN', 'NDUFB3', 'GBP1', 'NUMBL', 'SAA3P', 'MMEL1', 'ADRBK2', 'ABHD6', 'REXO1L6P', 'PAX1', 'RPL36', 'ZNF480', 'EXD3', 'RNMTL1', 'PDGFB', 'KIAA0895', 'PCDH7', 'PTPRJ', 'MYO1B', 'GPR63', 'PF4', 'NDST4', 'FTH1', 'PIGL', 'PARVG', 'BCL2L2', 'MRPL41', 'PRR15L', 'DNPH1', 'ZNF732', 'PROKR1', 'CKB', 'PSRC1', 'JMJD1C', 'REEP1', 'DHFR', 'TCIRG1', 'EML1', 'UGDH', 'SPANXN4', 'TRPV2', 'HMG20B', 'YIF1A', 'PSMD11', 'TRIM64', 'NCEH1', 'B3GALT4', 'ACTR3BP2', 'LINC00174', 'KRT33A', 'SMG1P3', 'COL6A5', 'FERMT2', 'HIST2H2BE', 'THUMPD2', 'CENPO', 'GTPBP10', 'C12ORF66', 'LINC00200', 'RABEPK', 'CATSPERG', 'SLC2A12', 'NXF4', 'OR2A1', 'PDSS2', 'GOLGA6D', 'LOC100240735', 'SNORA54', 'SDC3', 'PPP2CB', 'CELA2A', 'NLRP10', 'CADM2', 'PHF11', 'ZNF417', 'ARFRP1', 'BTN2A1', 'LYSMD2', 'ZNF775', 'KLF14', 'NEUROD2', 'ODF2', 'NTHL1', 'C2ORF50', 'GLIDR', 'SPTLC2', 'CD40', 'MRGPRX2', 'CCDC137', 'OR5H15', 'GUSBP5', 'LAMP2', 'PLCB2', 'CYP3A5', 'LINC00526', 'GTF2B', 'RPS27L', 'LOXL3', 'C12ORF49', 'GLTSCR1L', 'KYNU', 'KLHL24', 'KCNMB3', 'EIF4G1', 'LAT2', 'RAD51B', 'CXORF66', 'TCHHL1', 'CR1L', 'CSRP1', 'YBEY', 'VIMP', 'OLFM3', 'OR2C1', 'TPTE', 'SLC35D2', 'BTG4', 'LGALS7', 'PPP2R1A', 'TAGAP', 'ATP6V1D', 'SLC6A11', 'CLTA', 'ISM2', 'SNX7', 'GJA5', 'CCER1', 'LINC01600', 'TOMM6', 'SULT4A1', 'LECT2', 'PRDX1', 'SSU72', 'SAFB2', 'SNORD116-28', 'MMP16', 'ERAP2', 'SLC9B2', 'SLC25A21', 'LOC152225', 'SZT2', 'PRSS23', 'LINC00523', 'SOWAHA', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.7842806567227459 Spearman Correlation: 0.7801474535923802 Coefficient of Determination: 0.6150961485094615 RMSE: 0.2798059173746549 NRMSE: 0.10145725410358533 MAPE: 149.31756927053974 Pearson Correlation: 0.01240060616106584 Spearman Correlation: 0.1357099215700944 Coefficient of Determination: -23.861959194110824 RMSE: 2.4667701331168788 NRMSE: 0.6858330807303479 MAPE: 375.10744538188317 Predictor: ElasticNet Pearson Correlation: 0.666284968140166 Spearman Correlation: 0.6704648480163673 Coefficient of Determination: 0.42163356227156235 RMSE: 0.3429906710844314 NRMSE: 0.12436796189973834 MAPE: 191.41446515865383 Pearson Correlation: 0.29013871845265826 Spearman Correlation: 0.2955872267734012 Coefficient of Determination: 0.028727719364495807 RMSE: 0.48756385709247274 NRMSE: 0.13555678239868568 MAPE: 176.9678667161122 Predictor: RandomForests Pearson Correlation: 0.5757853265443027 Spearman Correlation: 0.6090999623864055 Coefficient of Determination: 0.31139095062590705 RMSE: 0.3742545846649031 NRMSE: 0.13570421545065686 MAPE: 226.42143900982865 Pearson Correlation: 0.37454317698428713 Spearman Correlation: 0.3629546503073604 Coefficient of Determination: 0.1152411543006725 RMSE: 0.46534329803740415 NRMSE: 0.12937882756305114 MAPE: 156.6695764121387 Fold: 4 Protein: RB1 x_train_column_count: 371 x_train columns: ['TINCR', 'OR4C15', 'TEX9', 'PCGF5', 'LINC00520', 'PEX1', 'GUSBP4', 'RAG1', 'CEACAM20', 'IGSF10', 'TMSB4XP8', 'C16ORF93', 'PKP1', 'RAD21L1', 'SMOC2', 'GINS4', 'ZBED5', 'RBAK', 'SNAR-B2', 'RGL2', 'PCDHA9', 'CAP2', 'ZPLD1', 'COLEC12', 'FAM110D', 'NIT2', 'CD209', 'HCG18', 'FCRL3', 'MAP3K19', 'TOPBP1', 'HIST1H3F', 'BMS1', 'ATAD2B', 'AREG', 'PIN4', 'SLC26A10', 'ENC1', 'DSN1', 'LRRC17', 'TEX36-AS1', 'ALX3', 'TTK', 'PELI3', 'TPTE2P3', 'GOLGA6L1', 'AGTR1', 'CBLL1', 'CDS1', 'CDK14', 'C16ORF70', 'CTAGE4', 'MARVELD2', 'ZRANB2', 'SF3A3', 'ERG', 'CTSG', 'NR4A3', 'KCNJ16', 'SUPT20HL1', 'POU2F2', 'OXTR', 'A4GNT', 'CCDC91', 'PEMT', 'DNAAF5', 'BLID', 'MTUS2', 'NDP', 'ASCL2', 'C1R', 'DSEL', 'RAB40AL', 'BHLHE40', 'VTI1A', 'GGH', 'TCEA1', 'GRIK1-AS1', 'IGF2BP1', 'SERBP1', 'INTS12', 'SNRPB', 'FAM178A', 'COL15A1', 'AMPD1', 'PAK6', 'NPW', 'ZNF676', 'SYNE2', 'IL17D', 'AXIN1', 'NCAPD3', 'POLD3', 'ARHGEF7', 'CCDC39', 'OR9Q2', 'PDP1', 'ULK3', 'IZUMO4', 'CLIP4', 'SOX21', 'KDM6A', 'DNMT3L', 'FXYD6', 'ZC3H12B', 'TM7SF3', 'ASTE1', 'ARFIP2', 'TMEM79', 'QSER1', 'SRXN1', 'PES1', 'TMEM45B', 'RSPH10B2', 'TENM4', 'DHCR7', 'SLC5A9', 'CDC6', 'TAT', 'CHST3', 'EXOSC1', 'SDHAF4', 'PLCE1', 'GKN1', 'HOXB2', 'KRTAP10-11', 'THOC5', 'ERBB2', 'PIFO', 'FRMD3', 'SEMA6C', 'DNAJC5B', 'TRPC5', 'TFAP2C', 'FAM120A', 'PITPNB', 'SLC4A5', 'CCPG1', 'FAM72B', 'RABGAP1L', 'NDUFAF7', 'ABCG2', 'KLRC2', 'ADAMTSL2', 'MORN2', 'PCDHGA11', 'DNAJC18', 'LOC154449', 'IFNE', 'TMEM27', 'SDHAF2', 'TOB2', 'CEP76', 'CFAP221', 'LY6G5C', 'MED25', 'FAM138F', 'NUTM1', 'RGS19', 'SHARPIN', 'RGS2', 'TEX10', 'KLF14', 'ADAMTS16', 'TRIB3', 'CMTR1', 'RPS27L', 'FAM90A1', 'GMEB2', 'PFN2', 'NBR2', 'CCNC', 'ACSM6', 'ARRDC2', 'CFC1B', 'DDX46', 'ADAM28', 'DRG1', 'DDX1', 'YWHAE', 'LRRCC1', 'LSG1', 'PNPT1', 'CRKL', 'B3GALNT2', 'BAIAP2-AS1', 'CDH23', 'COLEC10', 'FBL', 'ADGRF3', 'USP5', 'CEACAM22P', 'NME6', 'BEST2', 'IGFBP3', 'LAMA5', 'ILF3', 'ZNF319', 'CDHR1', 'TXLNB', 'AGAP5', 'DDX20', 'ZCCHC10', 'ACOX2', 'CES3', 'PLA2G2C', 'C10ORF128', 'MYL7', 'PDCD6', 'TNIK', 'LOC286359', 'CCDC168', 'EPM2AIP1', 'STXBP5L', 'HDLBP', 'ABCG1', 'PLXNB3', 'GPR89A', 'DPY19L2P4', 'DUSP12', 'LOC654342', 'ZNF384', 'HIST1H2AE', 'TMEM200B', 'PIK3IP1', 'APOA4', 'GPR4', 'POLR3E', 'NAT8', 'GANC', 'ADIG', 'PREPL', 'RPS3A', 'MORC4', 'PLP2', 'OR2AG2', 'OR5B12', 'LCNL1', 'S1PR3', 'BPIFC', 'BPHL', 'CEP290', 'ANKRD34B', 'ZNF320', 'CASP2', 'SMR3B', 'NLRP3', 'CXADRP2', 'KRT14', 'UBN2', 'EIF3J', 'TBC1D2B', 'KLRC1', 'PDSS2', 'NBPF10', 'LGI3', 'GTF2E1', 'LINC00479', 'MYNN', 'ID2B', 'NUP214', 'C9ORF69', 'USP22', 'FAM65C', 'QRFP', 'WWTR1', 'TRAF3', 'RIMS1', 'CALCB', 'STK19', 'ARL9', 'FBLL1', 'DSG3', 'LONRF3', 'HEATR5B', 'MIPEP', 'SFXN5', 'TIAL1', 'LCE6A', 'MOV10', 'FUT2', 'LYL1', 'SOWAHA', 'ZNF583', 'SCARNA8', 'SHC1', 'SH2D1A', 'UQCR11', 'ROPN1L', 'ADCY10', 'CERS5', 'PAPSS1', 'ZNF81', 'SLC44A1', 'MRPL23', 'CAMK2B', 'LYPD6', 'HHIPL1', 'ADGRG2', 'PSORS1C2', 'XAGE3', 'SEPT7P9', 'AQP1', 'PRR35', 'CAPNS1', 'PCDH18', 'ANKRD34C', 'CRHR1-IT1', 'UGT8', 'TRMT112', 'PDIA2', 'ABCA5', 'MED29', 'HTRA2', 'PLOD1', 'KRBA2', 'TRAF3IP3', 'PDIA3', 'LOC283332', 'STATH', 'EFHC2', 'PIGX', 'C17ORF78', 'IFITM1', 'APOM', 'PRSS38', 'DUS3L', 'ZNF469', 'P2RX3', 'KDR', 'ST8SIA6', 'HOXA2', 'PTBP3', 'C2ORF88', 'SPAG17', 'ABCC4', 'ATP13A4', 'PSMD11', 'TMEM63C', 'TMED8', 'ARMC2', 'TNFRSF14', 'METTL4', 'KCNV2', 'XRCC5', 'GTPBP8', 'GFOD2', 'ARPP19', 'OR4F29', 'ANKRD2', 'RER1', 'TXLNG', 'C11ORF58', 'TTC17', 'CCDC94', 'SNORA21', 'HIST1H2BC', 'RPS12', 'ABCC5', 'KRTAP24-1', 'ECEL1', 'FAM122C', 'NAP1L2', 'ERAP1', 'RAB31', 'TUBB6', 'QSOX1', 'RPS2', 'ZNF593', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.835132984386015 Spearman Correlation: 0.7659198187951484 Coefficient of Determination: 0.6974471016094917 RMSE: 0.1383430556368788 NRMSE: 0.05059356920599722 MAPE: 323.5939619904615 Pearson Correlation: 0.026512260784883425 Spearman Correlation: -0.011129814586216787 Coefficient of Determination: -9.38792466686143 RMSE: 0.5314208162525349 NRMSE: 0.5091603267663117 MAPE: 709.0311351121965 Predictor: ElasticNet Pearson Correlation: 0.5505277561203354 Spearman Correlation: 0.45052686568216577 Coefficient of Determination: 0.2638749303225313 RMSE: 0.21579059337366285 NRMSE: 0.0789169811928258 MAPE: 232.54532015579713 Pearson Correlation: 0.21079709081630352 Spearman Correlation: 0.2518809461464607 Coefficient of Determination: -0.07666509676515232 RMSE: 0.17108600432596127 NRMSE: 0.1639194461406903 MAPE: 116.3970080437406 Predictor: RandomForests Pearson Correlation: 0.6306686108272025 Spearman Correlation: 0.4571577706925974 Coefficient of Determination: 0.18613676407762747 RMSE: 0.22689891566937748 NRMSE: 0.08297941620442419 MAPE: 118.0625380627833 Pearson Correlation: 0.19961684996961276 Spearman Correlation: 0.22646915796955078 Coefficient of Determination: -0.021481284556595925 RMSE: 0.1666438817490903 NRMSE: 0.15966339798901077 MAPE: 110.53140893987295 Protein: CDH1 x_train_column_count: 836 x_train columns: ['RASD2', 'SAMD15', 'NDP', 'SNX29', 'ERCC6', 'GOLGA2', 'TBC1D22B', 'SAXO2', 'PARP4', 'RUNX3', 'ASF1B', 'VSTM1', 'PAG1', 'TBX10', 'MAD1L1', 'SHC1', 'OMG', 'CDH2', 'CASP10', 'ATP6V1E1', 'TAF1B', 'SYNGAP1', 'CREB3', 'SEC1P', 'GLIPR1L2', 'DSCR10', 'MRPL34', 'TMEM132D', 'SARAF', 'NAA15', 'SERPINB11', 'IGFL2', 'CTNNA3', 'ZNF716', 'NUP35', 'AARS', 'ADGRG1', 'C8ORF37', 'OR7C2', 'NHEJ1', 'SLC30A10', 'SLC26A11', 'SF3A2', 'PRAMEF2', 'LHX9', 'SIGLEC9', 'CHML', 'CFHR1', 'MIF', 'TWISTNB', 'CST13P', 'NTMT1', 'NUDT6', 'PSMD7', 'ZNF354A', 'CROCCP3', 'TMEM215', 'GMPPA', 'RAB34', 'RAD52', 'NXN', 'RNF125', 'RHOBTB1', 'CDPF1', 'CSF3', 'DYX1C1', 'PBX3', 'HIST1H2AC', 'OTOR', 'SERPINB12', 'MRPL54', 'GALNT1', 'SIKE1', 'CFAP221', 'FAM177B', 'GALNTL5', 'RPS20', 'CCT8', 'HILS1', 'FILIP1', 'LOC729609', 'FLJ23867', 'ZNF552', 'PALM', 'UGT2B10', 'STEAP1B', 'STK35', 'KCNT1', 'OR4N2', 'ARPC5L', 'IRF4', 'PCDHGA12', 'MYH8', 'AQP12B', 'C9', 'ATP8B2', 'EDA', 'METRNL', 'NRM', 'RASL11B', 'DDX51', 'RABIF', 'BTG4', 'DNAH1', 'SLMO1', 'RPL18A', 'RNF182', 'TTC22', 'RNFT2', 'FBXW10', 'FBXO22-AS1', 'DEFB135', 'ANAPC15', 'SYT16', 'NKG7', 'CRADD', 'ITGAM', 'CCDC30', 'METTL17', 'UMPS', 'GLTSCR1', 'GNPDA1', 'RNH1', 'MEG3', 'MADCAM1', 'APOM', 'SSUH2', 'SH3BP2', 'GAPDHS', 'PPP1R7', 'STPG2', 'CNKSR3', 'GLMN', 'TRIM8', 'ZFP36', 'RPEL1', 'PRPF19', 'RFX2', 'QRFP', 'ADIRF', 'ANKRD36BP2', 'AKIRIN2', 'KDELR3', 'TMEM56', 'TMPRSS15', 'AMY2A', 'GAS2', 'OR10H3', 'PPP1R21', 'SLC22A13', 'TEX26', 'MLXIP', 'CEP104', 'C20ORF194', 'DHPS', 'ZNF486', 'C11ORF24', 'RAD54B', 'HAUS7', 'SALL3', 'PROK1', 'NFIX', 'EMILIN2', 'EIF4E', 'MSRB2', 'STAM2', 'LINC00264', 'LINC00293', 'NPTX1', 'IFT80', 'SYNPO', 'NDOR1', 'DCLK2', 'ZFPM1', 'ZNF513', 'C20ORF24', 'GIMAP8', 'NPPC', 'IFT140', 'KHDC3L', 'PXDN', 'LRRC37A2', 'TMEM116', 'TYW3', 'AHCY', 'SLC5A12', 'NOSTRIN', 'GNB2', 'BUD13', 'CSF2', 'NNAT', 'TNK1', 'CHST8', 'CNGA2', 'ANKRD23', 'NKAIN2', 'BBS7', 'CCL7', 'AMN', 'YTHDC1', 'ALG1L', 'CDK5RAP3', 'MDC1', 'KRBA2', 'ZFP91-CNTF', 'URM1', 'C9ORF69', 'ARFGAP3', 'OR4F5', 'NRXN2', 'TCERG1', 'APOL2', 'MCM2', 'FLAD1', 'GRIPAP1', 'DNAI2', 'UCKL1', 'SCGN', 'SUPT20HL2', 'HNRNPCL1', 'SNORA49', 'GPR65', 'PDGFB', 'PCYOX1L', 'RPL7', 'KCNA3', 'CDC42BPG', 'TMEM150A', 'UBQLN3', 'CNDP1', 'ELMOD2', 'SPATA3', 'RAD51', 'OR12D3', 'PTH2R', 'SRSF9', 'HCG18', 'TCEAL1', 'DDX53', 'XRCC3', 'TSPAN2', 'FAM208A', 'LGALS4', 'LRRC7', 'FOXS1', 'ZNF251', 'DEFB115', 'WNT11', 'C17ORF77', 'NKX1-2', 'SNORA12', 'DEFB119', 'FMO9P', 'SYS1', 'ME2', 'NFX1', 'PEX2', 'CIAO1', 'PAIP2', 'H2BFM', 'ACSL1', 'TP53BP2', 'C11ORF49', 'APPL2', 'C11ORF71', 'GALNT16', 'LMF1', 'MRO', 'SMPD2', 'PDIA2', 'B3GNT8', 'SSBP3', 'HOOK2', 'HIST1H2BJ', 'SLC17A6', 'RAB3B', 'PDE1A', 'HBP1', 'FRMPD2', 'RNF169', 'FBLIM1', 'TAF6L', 'COL1A2', 'LINC00896', 'SLC4A2', 'LIPI', 'AFF1', 'C17ORF75', 'FBXO21', 'PLLP', 'ADRBK1', 'SRD5A1', 'LOC284441', 'OR52W1', 'SBSN', 'NKRF', 'SAV1', 'CKAP2L', 'CHEK2', 'TRMT1L', 'CSNK2B', 'UGT2B4', 'EML5', 'TUBB4B', 'KLHL7', 'SDSL', 'GOLGA2P6', 'RRAS2', 'ZNF436', 'RFC4', 'OR2C1', 'C15ORF26', 'A1BG-AS1', 'KMT2E', 'RAP1GDS1', 'GPR141', 'ZDHHC16', 'CPSF2', 'LPPR3', 'GCH1', 'TNNT2', 'NAGA', 'FOXK1', 'RAB42', 'GATA1', 'PVALB', 'CLEC2L', 'CYSTM1', 'PSMB7', 'SAMD4A', 'LKAAEAR1', 'PQLC1', 'WASH2P', 'RBMXL3', 'INS', 'DDX3Y', 'PAPOLA', 'TNFSF18', 'USE1', 'SLC5A6', 'SYNE3', 'S100A3', 'DENND4B', 'FAHD1', 'PPP6R2', 'SNORA40', 'SLC25A53', 'TMEM47', 'PIGV', 'GFI1B', 'BARHL2', 'TSPAN12', 'PPP1R13B', 'TMPO-AS1', 'PRPF3', 'SCAMP3', 'DPH2', 'NLGN2', 'NRDE2', 'ZNF487', 'C4ORF32', 'C6ORF89', 'PNN', 'PRRG2', 'TMEM26', 'CECR5', 'POSTN', 'DNAH9', 'FABP6', 'APOBR', 'ABAT', 'KCTD10', 'SCML4', 'PTER', 'SLFN13', 'YME1L1', 'KRTAP24-1', 'CTTNBP2', 'RTF1', 'GTF3C2', 'CHST13', 'HPGDS', 'OR9I1', 'GAPVD1', 'ENAM', 'ITFG2', 'OPRK1', 'PUS3', 'EPPIN', 'SF3B6', 'PCK1', 'PLCG2', 'RPS12', 'PPFIA2', 'MMP1', 'SLC35F6', 'STARD5', 'SFTA2', 'ZNF574', 'MUC21', 'RASGRP2', 'MAP7D1', 'C11ORF16', 'TDRG1', 'SUSD3', 'NDRG1', 'ACTL6B', 'CLEC16A', 'YIF1B', 'CSRNP3', 'LOC100190986', 'MAP3K19', 'SPATA33', 'KISS1R', 'CXCL8', 'VPS36', 'RNF17', 'STEAP3', 'NDUFAF6', 'SNORA5C', 'SLC33A1', 'C15ORF62', 'FAM104A', 'SDS', 'LSM2', 'PELI3', 'PRSS22', 'RAB33B', 'ZNF25', 'WNK3', 'NDUFAF1', 'STK16', 'PTPRC', 'MGC27382', 'PCID2', 'PCDHGC3', 'IHH', 'SCHIP1', 'PGM2L1', 'PABPC1L', 'SNX12', 'NF1', 'GCC2', 'PANX3', 'BIN3', 'XRN2', 'GTF2B', 'RNASEH2B', 'RPL19', 'LINC00696', 'ZNF208', 'TMC3', 'CCDC110', 'CILP2', 'TOR1AIP2', 'MYCNOS', 'SPAG11B', 'RPSAP9', 'INE1', 'TSPYL2', 'HIST1H1D', 'CNNM3', 'BDNF-AS', 'CCT6A', 'NXNL2', 'ZKSCAN2', 'ENC1', 'CD1D', 'ACSS1', 'UNC93A', 'RASAL3', 'COL4A6', 'MPV17L', 'DNM1P46', 'MRS2', 'TBXAS1', 'LPO', 'TMEM81', 'ARF5', 'UST', 'PPP1R1B', 'DSC1', 'WWOX', 'CD99L2', 'SMCR5', 'ADGRF1', 'SNORA71E', 'BTBD6', 'ELK1', 'SMO', 'LRRC57', 'PLAGL2', 'HIVEP2', 'KIAA1551', 'CENPBD1', 'KRTAP19-6', 'IFT88', 'CDKL2', 'RNMT', 'UGCG', 'SCARNA21', 'C6ORF52', 'EHD3', 'GALR1', 'AMH', 'HSPB3', 'COL5A3', 'KLK11', 'CATSPERB', 'NKAP', 'PAPPA2', 'NLN', 'IFNB1', 'LINC00620', 'SFPQ', 'TIMM17A', 'CELA3A', 'CCDC122', 'TMEM252', 'EXT2', 'HS6ST2', 'RMRP', 'NKD2', 'CEACAM4', 'LINC-PINT', 'SMIM10L2A', 'FOXI3', 'IFITM5', 'SREK1', 'MON1A', 'U2AF1', 'CLMN', 'ECHDC3', 'ELK3', 'HMOX2', 'RABGGTA', 'GCLC', 'MOV10', 'CCDC178', 'SERINC2', 'LINC01106', 'KIAA0556', 'CFAP69', 'CTTNBP2NL', 'FBRS', 'FMNL2', 'GFPT1', 'COMMD2', 'OR2Y1', 'GPLD1', 'MEPE', 'ASB16', 'MRAP2', 'TGM7', 'WFDC8', 'EHMT1', 'ADAM2', 'EBP', 'PUS7', 'ADCY1', 'COMT', 'ARRDC2', 'CTSW', 'NOP58', 'FCAMR', 'PPIP5K1', 'MDP1', 'NEGR1', 'DCAF12L2', 'XRCC1', 'INPP5D', 'MTMR4', 'ABT1', 'PHF2P1', 'APOPT1', 'CCDC159', 'NCAPG2', 'ZZZ3', 'DAD1P1', 'CIT', 'SCARNA15', 'TAAR1', 'DLEU2L', 'ZNF768', 'TTC31', 'CCL8', 'TAS1R3', 'MS4A15', 'TMEM225', 'PTPRF', 'LINC01366', 'DTD2', 'C1QTNF9B-AS1', 'PDCD1', 'COL6A4P1', 'ACTA2', 'SPATA31A5', 'OR4K15', 'EIF4G3', 'SLURP1', 'GRSF1', 'SAP30BP', 'GCNT4', 'OR1E2', 'TIGD2', 'SLC6A17', 'CCDC148', 'LINC00936', 'LINC00238', 'MLF1', 'SCG5', 'ITGB3BP', 'PLBD2', 'ABCB7', 'NCR3LG1', 'CCL18', 'CHIA', 'SLC6A12', 'FHL5', 'GPR52', 'RAD1', 'CCDC85C', 'CWC27', 'NUBP1', 'SCARNA18', 'UQCRH', 'CCNC', 'ZC3H7A', 'CANT1', 'MTERF4', 'TGM5', 'FAM195B', 'LINC01020', 'TMBIM6', 'MME', 'IL17RB', 'EIF2AK4', 'SYT17', 'REG1B', 'PTGFR', 'RPN2', 'CAPS2', 'NR2F6', 'C2CD4D', 'LRP12', 'KRT12', 'KIAA1324L', 'CLMP', 'KLF2', 'ZNF286B', 'HGD', 'USP17L9P', 'PLCL1', 'REM1', 'TCF7L1', 'NAALAD2', 'AXIN2', 'CFD', 'HOMEZ', 'GNB1L', 'TH', 'FANCE', 'STAG1', 'UROC1', 'MOB3C', 'OR8B12', 'P2RY4', 'PEX5L', 'STARD7', 'EGOT', 'DNAJC30', 'SNAR-B2', 'TRIT1', 'TIMP3', 'HAND2-AS1', 'RHBDD2', 'COL10A1', 'FAT1', 'C1QTNF9B', 'DEPDC1', 'ONECUT3', 'ANKRD39', 'AK7', 'MARVELD3', 'YLPM1', 'DDX60L', 'GRIN2B', 'RELB', 'SMYD2', 'ANAPC4', 'TRADD', 'STAG3L2', 'OOEP', 'RACGAP1', 'LOC221122', 'GUCY2F', 'TPSB2', 'NXF2B', 'ACAP1', 'OR11H1', 'JADE1', 'MARK2', 'SUPT20HL1', 'RIMBP2', 'KRTAP9-8', 'ZNF578', 'PRDX1', 'IRF2BP1', 'ANTXR1', 'COL8A1', 'PLK5', 'HABP2', 'COQ10A', 'SORCS1', 'XIRP1', 'THBS3', 'NLGN1', 'BPGM', 'ZNF17', 'TPD52L2', 'FAM58A', 'ASIP', 'DVL2', 'ZNF548', 'OR5W2', 'MT1DP', 'DDX39A', 'FAM212A', 'PDIA3', 'DEAF1', 'ADGRG3', 'DEGS2', 'DNALI1', 'SULT2B1', 'SREBF2', 'MMRN1', 'PYCR1', 'ANK3', 'CHRAC1', 'RBX1', 'CLDN9', 'IMPA1', 'SERPINB5', 'PGAM2', 'UBE2N', 'TXNL1', 'RAD9A', 'ZAR1L', 'COL11A2', 'SCAF4', 'OR2B2', 'LETM1', 'GRPR', 'MLEC', 'GALNT11', 'FRMD7', 'RSU1P2', 'ZNF367', 'GRAMD4', 'NUBPL', 'HSPB8', 'MPZ', 'HES4', 'TTC16', 'SFMBT2', 'FLJ42393', 'AP5Z1', 'LRRC3', 'WAS', 'PRMT2', 'TUBA1B', 'TSSC4', 'C5ORF58', 'OR52D1', 'TMEM141', 'MAPK10', 'CXORF56', 'ICAM1', 'ARF4', 'BTBD9', 'C5ORF60', 'OR2M1P', 'GLT6D1', 'RPS9', 'RAB19', 'GYPE', 'ATG12', 'NYX', 'ZNRD1', 'TMF1', 'GAS7', 'C1ORF68', 'SYDE2', 'DDX56', 'EEF2K', 'KRT18P55', 'NDNL2', 'WWC2-AS2', 'RNU4ATAC', 'CSMD1', 'IKZF4', 'CFAP36', 'NDUFS8', 'CETP', 'AXL', 'CYTL1', 'CYP8B1', 'RXFP4', 'LCA5L', 'SHMT1', 'CDH24', 'LTBP2', 'PRR26', 'ATG4B', 'ZMAT1', 'SPECC1', 'ZNF326', 'FAS', 'ARL4C', 'SGPL1', 'SLK', 'C22ORF34', 'CHCHD3', 'CTSA', 'LILRA5', 'GCA', 'AKR1B10', 'CES2', 'FAM160A2', 'MRPL10', 'SLC35A1', 'DNAJA2', 'RBP5', 'ABCD4', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.088539615757079e-15 NRMSE: 6.510206069483581e-16 MAPE: 3.5518371757951556e-12 Pearson Correlation: 0.2582082023159597 Spearman Correlation: 0.2884549682664373 Coefficient of Determination: -1.8584852247163184 RMSE: 1.9721186129279475 NRMSE: 0.35777341405027896 MAPE: 889.0593638670374 Predictor: ElasticNet Pearson Correlation: 0.9076996886401558 Spearman Correlation: 0.8819872811215521 Coefficient of Determination: 0.8036483472296828 RMSE: 0.495851640285235 NRMSE: 0.07895475307876101 MAPE: 312.88036205836335 Pearson Correlation: 0.41996707767960756 Spearman Correlation: 0.39946383371363736 Coefficient of Determination: 0.10309541142882905 RMSE: 1.1046842931483305 NRMSE: 0.20040715016659963 MAPE: 405.07390557454903 Predictor: RandomForests Pearson Correlation: 0.7542503669210825 Spearman Correlation: 0.7284044734292126 Coefficient of Determination: 0.5635090969717356 RMSE: 0.7393023251282937 NRMSE: 0.11771955114937321 MAPE: 240.86848940694355 Pearson Correlation: 0.7587279985088357 Spearman Correlation: 0.5273739533884297 Coefficient of Determination: 0.508056933639699 RMSE: 0.818130301338809 NRMSE: 0.14842173748028176 MAPE: 171.9195588239905 Protein: CDH2 x_train_column_count: 474 x_train columns: ['C19ORF12', 'CHTOP', 'DUPD1', 'MT1B', 'SNORD22', 'TMSB4XP8', 'ACOX2', 'TMEM80', 'CCL26', 'LCE1F', 'XPNPEP1', 'CRX', 'NOL6', 'CMTM8', 'ADAM33', 'ABCA8', 'CLPP', 'ZC3H13', 'IL27RA', 'IL1F10', 'SLCO2A1', 'NUP62CL', 'TCP10L', 'KIFC2', 'GPRC5D', 'RNF44', 'CCDC105', 'ZNF444', 'ATP2B2', 'MOBP', 'PSAT1', 'EED', 'VPS26B', 'AACSP1', 'CCRL2', 'RASSF9', 'DUSP28', 'FADS2', 'TAF1D', 'ZKSCAN3', 'C5AR1', 'MPLKIP', 'RFWD3', 'PTRH2', 'OR52B4', 'SLC25A47', 'ANKRD29', 'PPP2R3A', 'KIAA0513', 'EPS15', 'GFPT2', 'COTL1', 'SRSF4', 'MAGEF1', 'SEMA4B', 'TECPR1', 'REXO1', 'ITM2C', 'OR1I1', 'ZIK1', 'PCM1', 'UBL3', 'MEDAG', 'TTYH2', 'MTCH2', 'ANTXR1', 'KCNK12', 'ZNF527', 'ZNF764', 'SLC25A11', 'MSR1', 'FUBP3', 'TLN2', 'UGT1A4', 'ASUN', 'LOC494141', 'MTG1', 'CLEC14A', 'SNX1', 'PRX', 'CHMP1A', 'TRPM7', 'PARP9', 'DCAF13', 'IL18R1', 'KRTAP13-1', 'SAR1A', 'GLT8D2', 'GHRHR', 'CHST6', 'SLC35G2', 'ADIPOQ', 'IQCF6', 'ZNF649', 'TGFBR2', 'PDCD2', 'ITGB7', 'ARG1', 'FSHB', 'SETD8', 'C7ORF72', 'FOXD4L1', 'SSH2', 'CASP6', 'ZNF648', 'OR1S2', 'SLC1A7', 'FUT6', 'PTGER2', 'ACP6', 'C6ORF141', 'ZBTB24', 'AGPAT3', 'GRM7', 'SEMA3E', 'NR6A1', 'AFTPH', 'OR5L1', 'ST3GAL2', 'MED19', 'IDH3G', 'MAP2K3', 'TMEM102', 'KIAA0930', 'SP3', 'ANKLE2', 'KIAA0754', 'RAP2A', 'RBMXL2', 'SNRPD3', 'LINC00847', 'OR10Z1', 'LINC01550', 'CLEC17A', 'FAM179B', 'STAP1', 'TXNDC16', 'PTCHD3', 'RPIA', 'CFAP20', 'TTC17', 'GFAP', 'WHAMM', 'OR2T2', 'CRYGC', 'SRCAP', 'ADGRG4', 'SLC29A4', 'CTSF', 'MUM1L1', 'CETP', 'SAA4', 'ELAC1', 'OR5K2', 'SPC25', 'PDX1', 'ECI2', 'MBOAT7', 'C5ORF51', 'MMRN2', 'OSBPL5', 'CCDC132', 'CAB39L', 'CCNI', 'BTBD10', 'PLA2G5', 'MGAT4A', 'ISG15', 'SAV1', 'PFDN6', 'IRX1', 'GZMH', 'MUC12', 'CYR61', 'R3HDML', 'ZMPSTE24', 'MFSD6L', 'RBM25', 'OTOL1', 'CRY2', 'CITED4', 'SNORD15A', 'UMODL1', 'SOX10', 'AGAP2', 'KRT25', 'FADS1', 'GSK3B', 'DYNC1H1', 'ACSL4', 'PHF11', 'GJB6', 'ABI1', 'BAAT', 'RTKN', 'USP32P2', 'LIMK2', 'C22ORF42', 'DFNA5', 'SCD5', 'RINL', 'APOB', 'SLED1', 'DNASE2B', 'RBM38', 'HELZ', 'CLTCL1', 'FBXO8', 'AAAS', 'OR4C11', 'WWP2', 'CRB3', 'ELMOD1', 'NTM', 'TDP2', 'FNDC5', 'NPNT', 'UBA3', 'RAD9B', 'RPS23', 'DHX29', 'CD248', 'ATF5', 'SNX12', 'CDH13', 'TMEM251', 'TDO2', 'DKK1', 'FER1L5', 'BRMS1L', 'MYH7', 'WBP1', 'HNRNPAB', 'C12ORF54', 'NKAIN4', 'TYW5', 'LRRC41', 'C8ORF34', 'ICOSLG', 'GFM2', 'SPDYE3', 'ZNF589', 'GLTSCR2', 'CT47A7', 'DYNC1I1', 'STK3', 'TTC30A', 'RARS', 'JSRP1', 'RIPK1', 'PXDC1', 'ZRANB3', 'ZBTB48', 'GEMIN8', 'CACTIN', 'RPE', 'SPATA9', 'TSHZ1', 'RGPD8', 'RCHY1', 'MYSM1', 'HOXB13', 'ERP29', 'NTNG1', 'SLC44A5', 'FEZ1', 'ADGRG5', 'PPP1R12B', 'CRACR2B', 'CNDP2', 'PRH2', 'RANBP3L', 'FLJ16779', 'PRR26', 'OR2V2', 'ATP6V1G3', 'FLNC', 'TMEM169', 'CCDC47', 'GPR35', 'TCHHL1', 'SAMD12', 'RBMXL3', 'SCML2', 'MGST3', 'LCE1B', 'TIMM17B', 'AARS2', 'RAPGEF3', 'ATXN1', 'ZBTB32', 'TCP10L2', 'HIST1H4K', 'ANKS3', 'LSM3', 'FAM20A', 'CCDC88A', 'GPC3', 'CNIH3', 'RGS19', 'DNAJA1', 'RPL8', 'SLC25A46', 'PREB', 'DDR1', 'MT3', 'PPP2CA', 'RASSF10', 'SBF1', 'KLHL23', 'LANCL3', 'FAM69B', 'HBM', 'CENPV', 'KHDRBS1', 'RBSN', 'GGTLC2', 'LOC391003', 'KRTAP13-2', 'ST7-AS1', 'TMED5', 'PSMC1', 'THBS4', 'SYNJ1', 'GRN', 'WDR5B', 'SLC22A16', 'PRUNE2', 'CCDC74A', 'PCDHB9', 'OR4C15', 'CLK3', 'GSTA1', 'STKLD1', 'CCDC103', 'PVALB', 'ZNF300', 'BAG2', 'NINJ1', 'FAM161B', 'DNAH3', 'GCM1', 'C17ORF99', 'SP4', 'WNT8B', 'ATP5EP2', 'CDC42BPG', 'WDR38', 'SDHB', 'ZNF526', 'IL25', 'SEMA6A', 'ACOT7', 'SAPCD2', 'PYGM', 'CST9L', 'PGA5', 'UCP2', 'LOC401052', 'SIRT3', 'GNAI3', 'MAN2A1', 'KIF7', 'AP3S1', 'PTPRS', 'TSPAN19', 'PLOD3', 'H2AFJ', 'UVRAG', 'STH', 'FAM216B', 'CRAMP1L', 'BTBD6', 'MN1', 'INSL3', 'TATDN3', 'MYL7', 'RASSF5', 'DRD2', 'RPL17', 'TRIP10', 'CDO1', 'CBLB', 'ARHGAP12', 'RFNG', 'BCL7A', 'SUSD6', 'ASB16', 'CRTC2', 'NME4', 'GTF2H3', 'RPL32P3', 'ANP32E', 'HAR1B', 'CNR2', 'SCUBE2', 'IFNK', 'HMBS', 'UBE3C', 'ZNF687', 'ADAM28', 'ITGA9', 'OR9A4', 'VPS37D', 'TMEM45B', 'PLIN5', 'ERMARD', 'SETX', 'CELF6', 'CYP2C19', 'ZNF304', 'TMEM74B', 'LCNL1', 'SLC35C1', 'LINC00111', 'KLHL15', 'LETM2', 'AFAP1-AS1', 'KIR2DL1', 'NGLY1', 'ZC3H10', 'KHK', 'CREBRF', 'WNT9A', 'BPIFA4P', 'ENC1', 'RPS6KA3', 'TUBB7P', 'CA9', 'GRM5', 'TAF5', 'EXOSC7', 'BCHE', 'OR5T1', 'CCR5', 'OR9Q2', 'OR5AR1', 'NADK2', 'FAM134C', 'PDILT', 'TRPC6', 'ARL17A', 'LHB', 'IGF2', 'DNAJC5', 'OR2M5', 'UBXN11', 'BHLHE40', 'FAM90A1', 'TLN1', 'ROS1', 'DMGDH', 'GPR158', 'SRGAP2', 'PGM2', 'SECISBP2', 'TRIM34', 'LOC646214', 'GREB1L', 'IQCF5', 'TTN', 'NETO1', 'TMEM107', 'RPL23AP64', 'TRIM32', 'PRSS55', 'OR5D16', 'TEX14', 'POLR2L', 'UGT8', 'PCDHA2', 'CMSS1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.9329474040446496 Spearman Correlation: 0.9157378363706067 Coefficient of Determination: 0.8703908587136505 RMSE: 0.1365756890708092 NRMSE: 0.0494875313685083 MAPE: 416.4132935269736 Pearson Correlation: -0.0547303515072565 Spearman Correlation: -0.0468958465816282 Coefficient of Determination: -19.31022859148273 RMSE: 1.501930233150167 NRMSE: 0.7747978999784195 MAPE: 4903.9752445558 Predictor: ElasticNet Pearson Correlation: 0.6679188296842761 Spearman Correlation: 0.6411497012152951 Coefficient of Determination: 0.38133924189576085 RMSE: 0.2983883537822338 NRMSE: 0.10811955713538438 MAPE: 1306.2243194165953 Pearson Correlation: 0.18427156834464442 Spearman Correlation: 0.12074714148555468 Coefficient of Determination: -0.03650857288609255 RMSE: 0.33929604947066316 NRMSE: 0.17503200934271343 MAPE: 207.31062127137685 Predictor: RandomForests Pearson Correlation: 0.5778559068798708 Spearman Correlation: 0.5194861179291597 Coefficient of Determination: 0.17681264301289568 RMSE: 0.34419529510994284 NRMSE: 0.12471747775561376 MAPE: 1207.9699808039952 Pearson Correlation: 0.1416267973759037 Spearman Correlation: 0.13953041808501354 Coefficient of Determination: -0.024823473881214086 RMSE: 0.33737809841880095 NRMSE: 0.17404259957224263 MAPE: 135.5848037026012 Protein: CDH3 x_train_column_count: 75 x_train columns: ['TMEM180', 'GOLGA7', 'SLC25A52', 'TRAM1L1', 'ZBTB17', 'LRRC10B', 'LINC00483', 'CBX2', 'OSBP2', 'OXCT1', 'PLSCR4', 'HSPBAP1', 'RND3', 'HIST1H4G', 'LETM2', 'BLNK', 'GOLGA8F', 'UBR2', 'PRAMEF5', 'CKS2', 'C22ORF24', 'MTG1', 'SHMT1', 'NAPEPLD', 'SEC14L4', 'WSCD1', 'DAAM1', 'CBX4', 'DAW1', 'ILF3', 'SREK1IP1', 'SNORA45B', 'AHCYL2', 'GPATCH4', 'RNF145', 'UBAP2L', 'ANAPC2', 'IRGM', 'TAPBP', 'TEX43', 'SLC4A10', 'TTC41P', 'DHX29', 'SLC39A14', 'ADCY10P1', 'TCEAL1', 'PHF2', 'IP6K1', 'NUAK1', 'ZDHHC1', 'STRIP1', 'USP35', 'HELQ', 'TTC16', 'MED10', 'FAM26F', 'BEND3P3', 'ENTHD2', 'NDUFV2', 'ZNF800', 'PROL1', 'SHISA7', 'SLCO6A1', 'MYOCD', 'VAMP2', 'SERTAD4-AS1', 'PDE6G', 'MED12', 'CYB561A3', 'PPCDC', 'TBCCD1', 'BCAP29', 'TMEM37', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.5073894392882282 Spearman Correlation: 0.5211596266352589 Coefficient of Determination: 0.2574440431012226 RMSE: 0.17743618508682904 NRMSE: 0.12645650832192729 MAPE: 447.90408707930726 Pearson Correlation: 0.3272120940459823 Spearman Correlation: 0.2662601778077034 Coefficient of Determination: 0.02648191273221523 RMSE: 0.20502631286774792 NRMSE: 0.18248243308449 MAPE: 364.94545518979027 Predictor: ElasticNet Pearson Correlation: 0.435091913411065 Spearman Correlation: 0.4690819556968827 Coefficient of Determination: 0.17094377070623223 RMSE: 0.18748632298110762 NRMSE: 0.1336191135461234 MAPE: 307.21151760857305 Pearson Correlation: 0.44115605984880196 Spearman Correlation: 0.38307460192770487 Coefficient of Determination: 0.11374639854383228 RMSE: 0.19562150493549535 NRMSE: 0.17411174051257214 MAPE: 427.70783324804603 Predictor: RandomForests Pearson Correlation: 0.5110873459730939 Spearman Correlation: 0.5301540978002568 Coefficient of Determination: 0.20979175045074938 RMSE: 0.1830409992153586 NRMSE: 0.1304509879380237 MAPE: 262.60986791786945 Pearson Correlation: 0.44598591431554285 Spearman Correlation: 0.3422361874836345 Coefficient of Determination: 0.09289585314756221 RMSE: 0.19790928295302648 NRMSE: 0.1761479635375923 MAPE: 690.6540427178801 Protein: PTEN x_train_column_count: 886 x_train columns: ['FAM223B', 'NME2P1', 'ACSL4', 'PMP22', 'HLTF', 'ZMAT3', 'LRRC42', 'GUCY1B3', 'ANKRD37', 'FKTN', 'IL17D', 'MYLK2', 'RD3', 'S100A1', 'GGT3P', 'TNNT3', 'SMOC2', 'S100A9', 'UBE2W', 'BLK', 'LYPLA2', 'SRI', 'PCMTD1', 'OR8D2', 'ZNF705D', 'ZC2HC1B', 'KRBOX4', 'PNMT', 'KRTAP19-3', 'GAGE2B', 'MARCKS', 'NACC2', 'ZNF140', 'GALNT2', 'ABCB8', 'MYL4', 'FOXR2', 'OR51G1', 'SLAMF1', 'CAMK2B', 'MMP10', 'ROBO3', 'NUDT18', 'TMED7', 'TNFAIP8', 'SBNO1', 'RGP1', 'MX2', 'ZNF252P', 'MFAP3L', 'BAGE', 'CDKN3', 'LACC1', 'C10ORF71', 'HSF2BP', 'LINC01587', 'FSIP1', 'PTP4A1', 'PSMC1', 'ACD', 'DNPEP', 'CCDC176', 'PANK3', 'DRAIC', 'OR51F1', 'GJA5', 'TCAF2', 'CNN2', 'KRTAP9-8', 'DMRTB1', 'SNRPD2', 'ATE1', 'RMST', 'MCM3AP-AS1', 'ODF3B', 'RPL23AP64', 'SLC22A2', 'POU2F3', 'GRPEL2', 'EDIL3', 'TP53INP2', 'NNAT', 'ANKRA2', 'DOCK11', 'CCDC185', 'XKR7', 'FAM120AOS', 'ALS2CL', 'EN1', 'ADCY10P1', 'ZSCAN12', 'SNHG20', 'PAEP', 'GPX6', 'SKIDA1', 'DDX56', 'PAX2', 'SMIM11', 'OSBPL7', 'ARPP21', 'ADGRG4', 'RNASEH2C', 'ZNF717', 'PCDHGA10', 'RECQL4', 'GUCY1B2', 'PHKB', 'TSPAN14', 'RSU1', 'REXO1L1P', 'LPCAT3', 'SNORA53', 'PROC', 'OSGIN2', 'ELK4', 'NKAPL', 'SLC6A1', 'NBEAL1', 'CNTFR-AS1', 'HIP1R', 'STOM', 'ZNF668', 'CMTM1', 'LINC00596', 'NLGN4X', 'C1ORF174', 'PGP', 'LBHD1', 'RABGGTA', 'VPS37B', 'XKR3', 'ANO8', 'MFF', 'CALY', 'SMAD1', 'SLC7A5P1', 'AZIN1', 'SYTL3', 'SLC25A51', 'NARS', 'OR6B1', 'MATR3', 'SFTPC', 'FAM60A', 'ZSCAN29', 'FAM138E', 'STUB1', 'FBXL12', 'PSMD5', 'LRRC14', 'VWA5B1', 'LIMK1', 'SUSD2', 'OR6C1', 'KLHL20', 'ARG1', 'CLMP', 'GOLGA8G', 'METTL23', 'OR51B2', 'GLCCI1', 'FAM63A', 'RNFT2', 'VLDLR', 'RNF121', 'ZFAND4', 'SELPLG', 'SEZ6L2', 'ZNF609', 'KCNJ1', 'AEBP2', 'TMEM132B', 'KRT27', 'OR1L8', 'FAM26E', 'ZNF491', 'CFAP43', 'C8ORF46', 'HPRT1', 'ADH7', 'SIPA1L1', 'TMCO5A', 'SLC35A5', 'FBXO41', 'NALCN', 'NAIP', 'TTLL10', 'ZNF137P', 'ZNF182', 'IL17A', 'NEFM', 'HIF1A', 'HACD1', 'LRRTM4', 'KLHL3', 'ELOVL1', 'IL2', 'DAAM2', 'IRF2BPL', 'ZC3H14', 'MLH3', 'TMPRSS5', 'IGSF8', 'KCNE5', 'MAN2B2', 'ADAMTS5', 'SDC3', 'UGT1A6', 'TRAPPC11', 'KIAA1143', 'ANKHD1-EIF4EBP3', 'QTRTD1', 'RSRC1', 'EML6', 'LINC00479', 'PLEKHA8', 'LRTOMT', 'GABRB2', 'MAT2B', 'DOCK10', 'MPLKIP', 'POU3F2', 'EWSAT1', 'SMCO2', 'ZNF33A', 'ZBED9', 'RAB40A', 'GRM5', 'CHAMP1', 'MFAP5', 'ZFYVE28', 'FOXO3B', 'MRPL2', 'BIRC3', 'MRPL9', 'AGA', 'CCR5', 'TBP', 'ARHGAP5-AS1', 'ZPR1', 'TEX13B', 'B9D2', 'GNG13', 'C1ORF168', 'OTOL1', 'NDUFB2-AS1', 'FAM74A1', 'NOTCH3', 'KGFLP1', 'ELK3', 'PITPNM3', 'OR5AR1', 'SNORA54', 'FBXL6', 'EPB41L4A', 'SAMD5', 'MEIS3P1', 'ROBO4', 'SNAP91', 'TDG', 'ZNF641', 'NFIB', 'KCNA2', 'PSG2', 'SDHAF3', 'SACS', 'PAH', 'PIAS3', 'NME1', 'WFDC13', 'SUPT4H1', 'EGFL6', 'SYCE3', 'CACTIN', 'KLF12', 'MDFI', 'OR3A1', 'PARPBP', 'UGT2B7', 'CYP4F8', 'C8ORF74', 'TMEM63A', 'LINC00917', 'ZCCHC14', 'ZNF484', 'MICU3', 'ZNF595', 'LUZP1', 'RPS10', 'KRT26', 'GLYATL1', 'DOCK7', 'HSFX2', 'SFTA3', 'OR5M1', 'PACSIN2', 'CCDC85C', 'APPL2', 'C1ORF226', 'FIRRE', 'GCNT4', 'PIGA', 'CATSPER3', 'LINC01553', 'ZNF77', 'TMEM52B', 'TCHP', 'CHP1', 'LAMA4', 'DEFB131', 'STRADB', 'ITGB5', 'EIF3A', 'BTBD10', 'DTWD2', 'VPS13D', 'TBX19', 'PRDM4', 'RP9P', 'VPS4A', 'TMED10', 'RFK', 'OSTC', 'RPRM', 'FBXW10', 'TMEM205', 'LINGO2', 'ZC3H8', 'USP51', 'NUDT8', 'C1D', 'ABCC13', 'FHL5', 'SLC44A4', 'SYT8', 'DUSP23', 'TSHZ1', 'LINC00092', 'TCAIM', 'FAR2', 'LSMEM2', 'SMARCA4', 'TMEM185A', 'MBNL1', 'XRCC5', 'ZNF75D', 'PRUNE', 'COMMD4', 'PSMG3-AS1', 'FFAR4', 'ZNF763', 'MCM4', 'SOD2', 'OR13A1', 'MXD4', 'ZNF674', 'APOA4', 'NME9', 'TCEAL1', 'LCE1C', 'LNPEP', 'TIMMDC1', 'PGF', 'UNC119B', 'USP27X', 'HAP1', 'FLJ16779', 'SH3BGR', 'SUGCT', 'CTAGE1', 'TBC1D28', 'GPR182', 'NUSAP1', 'MAP3K11', 'XCR1', 'ADIG', 'FERMT3', 'EPDR1', 'SIGLEC9', 'PTX4', 'LINC00961', 'RRAGD', 'UPK3B', 'CST4', 'PTENP1', 'RTN1', 'OR2A12', 'FAM76B', 'TIAM2', 'C4ORF48', 'FBN2', 'PPAPDC1B', 'CCDC67', 'HACD2', 'GML', 'PSMD12', 'FRMD3', 'C20ORF194', 'VWA5B2', 'IL22RA1', 'STAT2', 'RGS9', 'SYT1', 'PDCD6', 'GAGE12D', 'LINC00314', 'ARHGEF19', 'C4ORF22', 'C5ORF52', 'MYNN', 'OR11H12', 'KPTN', 'OR4K17', 'GJD3', 'GMCL1', 'IMMT', 'CCIN', 'LOC100272216', 'RSC1A1', 'CCDC7', 'NDUFV1', 'WDFY1', 'POLB', 'SULT2B1', 'PAX8', 'GMFB', 'C19ORF54', 'RNF111', 'TRIM16', 'SLC14A2', 'ZNF486', 'INSL5', 'SPACA3', 'IGF1', 'ANKHD1', 'FBXL14', 'MBD3L2', 'SPNS2', 'FZD6', 'MIDN', 'MED11', 'ABHD13', 'L2HGDH', 'RSPO1', 'H2BFWT', 'PCDHA9', 'ZIC1', 'HMOX1', 'KIAA1107', 'DCLRE1A', 'LOC100129034', 'OMP', 'FBXL19', 'GALNT6', 'WDR49', 'GPR173', 'NIPA2', 'GHRHR', 'MUC4', 'ACTR1B', 'COLQ', 'RBP3', 'SLC45A3', 'KIF26A', 'CNOT4', 'SLC12A9', 'IMPA1', 'BTNL9', 'LINC01011', 'HCRT', 'RASEF', 'GOLM1', 'SCRN1', 'FAM196B', 'MMEL1', 'ANKRD53', 'THEM6', 'ZYX', 'NCOR1P1', 'ERCC2', 'TMEM206', 'DDIAS', 'ZNF131', 'ADAM29', 'ARHGEF18', 'DAPK2', 'ITPK1', 'WNT8B', 'PDE11A', 'CCNB3', 'NAB1', 'SLC7A2', 'CBWD2', 'GPR162', 'ZEB1-AS1', 'STAC2', 'SSH2', 'GPRASP2', 'AFP', 'LIN7C', 'HFE2', 'USP4', 'UEVLD', 'HHLA3', 'GSK3B', 'FAF1', 'PPIA', 'ATRAID', 'KLHL30', 'LMOD2', 'TMEM14B', 'SETDB2', 'NLRC3', 'RPL13AP17', 'OR5T2', 'PRORSD1P', 'ARRDC5', 'FNDC4', 'SLC25A2', 'NDRG2', 'ACBD6', 'SCRN3', 'BCYRN1', 'SHROOM4', 'TPRN', 'NID2', 'PRB1', 'NUDT13', 'SNAR-I', 'RAB9A', 'SLC22A18AS', 'ALOX5', 'PAX6', 'ZNF766', 'MFSD5', 'WFDC2', 'DOCK9', 'PIGU', 'PTPN12', 'TRPV1', 'GANC', 'SEMA3G', 'TMEM184A', 'PRR22', 'CXORF40B', 'GP9', 'SUFU', 'CDKN1A', 'VOPP1', 'THPO', 'PABPC1L2B', 'PLXNB1', 'CXADRP2', 'MRPL21', 'GCSAM', 'GDPD5', 'APOA5', 'CRISP1', 'GSDMA', 'OR2M7', 'BEX1', 'C8ORF33', 'INTS4P2', 'ZNF180', 'USP47', 'LPAL2', 'EIF2B5', 'LINC00710', 'CADM2', 'PRLR', 'RTN4R', 'SF3A3', 'C1QTNF6', 'TECR', 'BRDT', 'MSTO2P', 'RNASE8', 'CIC', 'GCM2', 'KRTAP1-5', 'ATAD2B', 'MYSM1', 'MYOC', 'SMCR8', 'CKLF', 'C3ORF52', 'PRSS42', 'POTEC', 'ANKRD30BL', 'PCSK1', 'SMPD3', 'CREBZF', 'FGF14', 'ANKRD26P1', 'RFXAP', 'NEURL4', 'HNF1A', 'WDR1', 'TAF7L', 'CYP1A2', 'ISCA1P1', 'SNX7', 'NPY1R', 'AKR1E2', 'CDC40', 'ANKRD22', 'ITPKA', 'HAUS7', 'TRAK2', 'SNORA14A', 'ARHGAP19', 'RILPL2', 'TSPAN8', 'PCDHA7', 'CMSS1', 'NDUFAF2', 'BCAS1', 'GARS', 'RPL26L1', 'SMARCAD1', 'TSC22D4', 'TCP11', 'MRPL16', 'ZEB1', 'STAG3L3', 'MYT1', 'MYOM3', 'ZNF565', 'RCAN2', 'GNL3', 'PAPOLA', 'NFE2L3P2', 'ABCC5', 'PRPS1L1', 'HILPDA', 'ATR', 'ACVR1', 'BCL2', 'MAML1', 'FAF2', 'ARHGEF39', 'DNM1P46', 'LOC100287704', 'PAK4', 'ANGPT1', 'N4BP3', 'POP1', 'ARHGAP22', 'ECM2', 'SNX8', 'TCTEX1D1', 'DLEU2L', 'PKP4', 'LRRC27', 'RAB6C', 'ASAP3', 'PLLP', 'CBLN3', 'PCM1', 'POLR3D', 'DBF4B', 'DST', 'RHPN1', 'TGM5', 'SNORA80A', 'CUBN', 'KLHL33', 'NGLY1', 'CDH16', 'TCEA2', 'RRN3P2', 'AMDHD2', 'CD5', 'CYP24A1', 'CHD7', 'ZNF791', 'DCANP1', 'SCIMP', 'GALNS', 'ZBTB16', 'PSG7', 'TBC1D24', 'NEFL', 'BARD1', 'OR2W3', 'MCM6', 'SLC16A6', 'BAAT', 'RALB', 'MCTS2P', 'HAO1', 'BTBD18', 'GLRX2', 'PDSS1', 'ADAD2', 'VPRBP', 'RNF207', 'TNNC2', 'FAM212A', 'OR5K2', 'SPANXN4', 'PLD4', 'PPAP2B', 'PRAMEF9', 'NDUFB7', 'TRPC4AP', 'GSG2', 'NUDT7', 'SPCS2P4', 'MFSD10', 'SLC18A3', 'ECHDC1', 'SERPINA5', 'TRIM13', 'PBDC1', 'SLC6A4', 'LYPD8', 'PRKCH', 'ADCY5', 'NBEAP1', 'FDX1', 'DCTN4', 'WBSCR27', 'RARRES2', 'CDC14C', 'NUCKS1', 'ALDH1L1', 'FLJ23867', 'OR4C3', 'MDM4', 'RGL4', 'PPAPDC2', 'MOGAT1', 'ADGRB1', 'PLA2G12A', 'CCDC141', 'DUXA', 'TRIM14', 'ATG16L1', 'OR4A47', 'KCTD2', 'ZP2', 'SLC9A3', 'LINC00482', 'YKT6', 'AQP7P1', 'RRM1', 'DKFZP779M0652', 'TCF20', 'TMUB2', 'GJA4', 'SDPR', 'FAM71F1', 'TNRC18', 'GOLT1B', 'CES4A', 'DMBT1', 'MAFA', 'NEURL3', 'CACNA1C', 'PES1', 'DNAJC18', 'DNASE1', 'SPICE1', 'EMP1', 'TMED7-TICAM2', 'MS4A14', 'HCN2', 'NR1H4', 'PDDC1', 'NDUFA5', 'NOS1AP', 'MIMT1', 'RALY', 'APOF', 'NME6', 'TP73', 'PGGT1B', 'CTSV', 'EPB41L4A-AS1', 'C17ORF62', 'TNNI3', 'ASB10', 'UGT2B10', 'ATXN3L', 'SPINK1', 'SYNDIG1', 'SNORD115-7', 'MBD3L5', 'KARS', 'NT5C2', 'MINA', 'TMEM39B', 'MTG1', 'KIF20B', 'RSPH4A', 'ARID2', 'OSBPL1A', 'UCA1', 'HEATR1', 'MESDC1', 'ZG16', 'OR6P1', 'PSME4', 'ARRB1', 'COLEC10', 'YAF2', 'TIMM10', 'TMEM176B', 'BRMS1', 'RNF8', 'UGT8', 'FLG', 'CHMP4A', 'CHD5', 'SLC37A3', 'TBC1D10B', 'GUCY2GP', 'NBR1', 'MNS1', 'TPM4', 'ITLN2', 'RGS17', 'SEMA6A', 'SERF1A', 'IGSF1', 'GDI2', 'C1QTNF8', 'CD14', 'TAS2R38', 'HOXA4', 'MRPS10', 'ALDH8A1', 'BST2', 'RPL22L1', 'LINC00896', 'FAM83H', 'LOC440173', 'ADAM5', 'TMPRSS11D', 'SYK', 'C5ORF38', 'TP73-AS1', 'SCRT2', 'CNBD1', 'FAM222A', 'ASB11', 'NPRL3', 'FAM96B', 'EP400', 'ZNF121', 'PELI1', 'MYEOV2', 'OGFOD3', 'NUDT3', 'BMPR1A', 'CC2D2B', 'CDK1', 'CNDP1', 'HAS2-AS1', 'HOXB9', 'MFSD1', 'KIAA0087', 'MEFV', 'CLK3', 'OR1G1', 'TBPL1', 'A1BG', 'SLC6A20', 'SLC9A8', 'ZNF696', 'ACTL7B', 'PIGK', 'NEK4', 'EDDM3B', 'E2F5', 'SNHG10', 'CASP2', 'ZMIZ1-AS1', 'DYNC1I2', 'MTHFD2L', 'LINC00938', 'LOC730668', 'DDX11L2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.2958388487958737e-15 NRMSE: 4.441037698846862e-16 MAPE: 2.666616763353068e-12 Pearson Correlation: 0.08676889125106359 Spearman Correlation: 0.07897604708288133 Coefficient of Determination: -1.6769511398267527 RMSE: 1.2198584701134156 NRMSE: 0.19073699790687446 MAPE: 1974.9090338176998 Predictor: ElasticNet Pearson Correlation: 0.8200730724327376 Spearman Correlation: 0.7911172987851413 Coefficient of Determination: 0.6354338201464729 RMSE: 0.3391997010160105 NRMSE: 0.06561430304395127 MAPE: 238.53998858136282 Pearson Correlation: 0.35984708792945164 Spearman Correlation: 0.37714934101422715 Coefficient of Determination: 0.1236968037525451 RMSE: 0.6979373204038815 NRMSE: 0.10912943794916448 MAPE: 321.05610206121355 Predictor: RandomForests Pearson Correlation: 0.6009224099788066 Spearman Correlation: 0.5363880396313179 Coefficient of Determination: 0.2871901175826892 RMSE: 0.47430109589997377 NRMSE: 0.09174812285282687 MAPE: 192.64007081578347 Pearson Correlation: 0.44332905639699177 Spearman Correlation: 0.4819866606652965 Coefficient of Determination: 0.15261861508453423 RMSE: 0.6863232059460558 NRMSE: 0.10731345570261211 MAPE: 228.01690843796177 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['ZNF17', 'PITPNM2', 'TPP2', 'WFDC10B', 'WFDC3', 'LIF', 'LYPD3', 'SPACA3', 'CRP', 'PFKP', 'ZNF213', 'RPS9', 'CTNNBIP1', 'SART1', 'DIMT1', 'BAK1', 'CSTA', 'MAGED2', 'UPP1', 'CMTM5', 'GALT', 'RPSAP52', 'ABCC11', 'TRAF7', 'GPR156', 'LOC399815', 'PDZD8', 'FBXO38', 'ACTR3C', 'LINC01020', 'SHROOM4', 'GSPT1', 'DHX37', 'WDR87', 'FBXL12', 'GPR101', 'DNAH12', 'SDHAF1', 'UBR5', 'HOXA13', 'TONSL', 'OR2M2', 'PLEKHG6', 'LINC00950', 'SYCP1', 'DDX19B', 'ADAMTS18', 'SCYL3', 'CMTR2', 'INS-IGF2', 'TGM4', 'HFM1', 'SLC39A3', 'CASKIN1', 'LILRA3', 'TMEM37', 'TEX9', 'TAF4', 'MTUS1', 'ANKDD1A', 'ONECUT2', 'ABCC6P1', 'RPL13P5', 'ASIP', 'OTOP2', 'C2ORF81', 'TMPRSS6', 'PRB1', 'ATG10', 'ZNF700', 'DEFB109P1', 'COL5A3', 'INPP5B', 'DMP1', 'NFKB1', 'BLZF1', 'HIPK3', 'MST1P2', 'ZNF618', 'RGPD1', 'CYLC1', 'CLDN19', 'CRYM', 'TSR1', 'LRRC75B', 'ATG9B', 'SLC43A2', 'BIRC5', 'TMEM173', 'WBP11P1', 'INPP5E', 'CCDC101', 'LRRC8C', 'C1QTNF8', 'RGS14', 'PEA15', 'GGTLC2', 'GPR18', 'FAM160B2', 'SIX2', 'FASTKD2', 'SEMA3F', 'SUV39H2', 'RNF185', 'FOPNL', 'PGLS', 'GATAD2B', 'MANBA', 'DENND2C', 'TNFSF13B', 'RPL7A', 'ZBP1', 'MAGEC1', 'ACMSD', 'LARS', 'ACOT4', 'SDK2', 'OSBP', 'SKIL', 'DBNDD1', 'ARRDC4', 'FLJ23867', 'FGD3', 'RTN3', 'BRSK1', 'GNL1', 'FAM131C', 'LRRN2', 'TRPM7', 'UBAP2L', 'NKX6-3', 'VAPB', 'UGT2A1', 'PDCD6', 'HMBS', 'PSG10P', 'CPNE9', 'APBA3', 'ANXA10', 'RABGGTB', 'KXD1', 'LAIR2', 'NMD3', 'RTP5', 'PGAM4', 'CNTNAP4', 'GSTTP1', 'CREB5', 'NME5', 'KCTD11', 'STAU2', 'S100A6', 'SLC47A1', 'AXIN1', 'LINC00304', 'OR4X2', 'NFE2L3P2', 'NFKB2', 'BAGE', 'CSNK1G3', 'NOL9', 'C3P1', 'CYP3A4', 'KIF21A', 'LEAP2', 'KRT81', 'PRPS1L1', 'PRAMEF2', 'PPARA', 'C1ORF64', 'ITGAL', 'MYLK2', 'PEX26', 'GUCY1B3', 'OXTR', 'ASAP3', 'SORT1', 'MIR7-3HG', 'GDF3', 'DDTL', 'CENPC', 'RNASE13', 'ZBED8', 'ZNF333', 'LY6G6D', 'METAP2', 'SYT5', 'OSBPL10', 'C1QA', 'ZNF492', 'OR12D2', 'PRKY', 'TMCO4', 'CCNA2', 'CAMK1D', 'NINJ1', 'ICAM3', 'BPIFB4', 'NCOA5', 'RNF222', 'PPP1R3A', 'CYSLTR2', 'EPHB6', 'RPS3A', 'STOX1', 'MEN1', 'XPNPEP1', 'PCLO', 'SNHG20', 'NSDHL', 'KRTAP9-4', 'GOLT1B', 'MTHFD2L', 'PTBP1', 'SCX', 'OR1L4', 'PDC', 'NRADDP', 'TMEM45A', 'TMEM105', 'SAMD14', 'ADGRG5', 'TMPRSS11B', 'C11ORF53', 'APOA1', 'RPS2', 'TRAM1', 'LINC00957', 'ELMOD1', 'HMGCS2', 'TLR1', 'TNFRSF17', 'DNAJB9', 'TBXAS1', 'SPON2', 'CBLL1', 'PRDX2', 'C7ORF61', 'TAAR9', 'HSPA7', 'OR4D9', 'MPND', 'SCTR', 'HSD3B2', 'EXOSC3', 'ACHE', 'ZFP42', 'OTUD5', 'COMMD5', 'PTPRK', 'LYRM1', 'UBE2W', 'PPP6R2', 'EGFR', 'TM4SF4', 'DCTPP1', 'MACROD1', 'ZSCAN29', 'SCNN1B', 'PHF1', 'MAML1', 'TMEM220', 'UBE2U', 'LOC100132831', 'C11ORF68', 'NOP14', 'ST6GALNAC6', 'BRINP3', 'MIS18A', 'DROSHA', 'CPE', 'GSS', 'PLCB4', 'TOX3', 'CLEC4M', 'LRP2', 'C10ORF55', 'BCL6', 'MED25', 'RIOK2', 'CNTRL', 'PPIB', 'KRTAP10-10', 'CPOX', 'DNAJB12', 'MYBL2', 'DBNDD2', 'DUXA', 'MAPT-AS1', 'ACTR1B', 'TUBA1C', 'ZNF678', 'MASP1', 'NUP37', 'EDN1', 'AARS2', 'ZBTB34', 'ZNF608', 'HMOX2', 'BREA2', 'C1ORF204', 'FAM84A', 'IGF2BP2-AS1', 'OR1J4', 'C17ORF50', 'SLC20A1', 'C2ORF16', 'EEF1G', 'WFDC10A', 'ST7', 'FAM99A', 'ASPG', 'RBM4B', 'PLCB1', 'SCN4A', 'DDX5', 'MEP1B', 'PCDHGB1', 'AIG1', 'PROM1', 'ZNF211', 'YTHDF1', 'SMARCAL1', 'GRIK5', 'SLC22A17', 'TPCN2', 'GSTK1', 'IRX4', 'LRRC16A', 'SLC16A3', 'KIAA1644', 'FAM157A', 'LSS', 'RBM10', 'IST1', 'MORF4', 'MYH14', 'FZD4', 'UBQLN1', 'HMGB3', 'NRN1L', 'DTX3', 'P2RY1', 'METTL25', 'ZNF556', 'IRF2BPL', 'OR8K3', 'AAGAB', 'ZNF343', 'TMEM254', 'CCT5', 'LMBRD2', 'CDK17', 'SCGB1B2P', 'SUPT16H', 'RPL10L', 'NDUFS2', 'EFHC1', 'FER1L6', 'RPIA', 'HMBOX1', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.8368404594760576 Spearman Correlation: 0.8031489300413878 Coefficient of Determination: 0.7003019546160996 RMSE: 0.10499880843067902 NRMSE: 0.0676429753136924 MAPE: 231.53964225211143 Pearson Correlation: -0.06543986324954536 Spearman Correlation: 0.22869362460878565 Coefficient of Determination: -2861.86797185338 RMSE: 11.134947014738243 NRMSE: 10.817875095683753 MAPE: 1517.2739483331443 Predictor: ElasticNet Pearson Correlation: 0.4796770276888251 Spearman Correlation: 0.42810651264900534 Coefficient of Determination: 0.18325428282399991 RMSE: 0.1733348337260581 NRMSE: 0.11166682797620106 MAPE: 169.7040582190047 Pearson Correlation: 0.20309004700293606 Spearman Correlation: 0.2548036758563075 Coefficient of Determination: 0.033985666446470386 RMSE: 0.2045404843683039 NRMSE: 0.1987161150365817 MAPE: 171.73154155984224 Predictor: RandomForests Pearson Correlation: 0.5880438087240836 Spearman Correlation: 0.47304137991700407 Coefficient of Determination: 0.1975925058005683 RMSE: 0.17180662374519234 NRMSE: 0.11068231518453364 MAPE: 141.39645257808232 Pearson Correlation: 0.18505333629494433 Spearman Correlation: 0.19232908140999266 Coefficient of Determination: 0.02725884750022667 RMSE: 0.2052514054113147 NRMSE: 0.19940679232817587 MAPE: 290.4105544173726 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['PLET1', 'FRAS1', 'LANCL3', 'GIGYF1', 'DGKK', 'MED27', 'RHOU', 'TEX11', 'KIF21A', 'KRTAP5-7', 'CCDC18', 'FAM183CP', 'TRIP12', 'MTUS2', 'CYP46A1', 'ERMP1', 'OR5D13', 'LOC727896', 'GOLT1B', 'GOLGA2', 'RIPPLY3', 'TRIB1', 'CLEC18A', 'LINC01138', 'CA5B', 'MITF', 'DNAAF3', 'SSR2', 'SPATA20', 'CBX7', 'TMC1', 'ALDH5A1', 'CDKN2B-AS1', 'TMED6', 'GNRHR', 'LRTM2', 'APAF1', 'WDR74', 'PEX13', 'ZNF260', 'CCND3', 'PCCB', 'BCL7B', 'RNASET2', 'SNHG11', 'SLC25A32', 'ANKRD20A11P', 'CHD4', 'LINC01558', 'GLIPR1L2', 'DIRC1', 'TRIP6', 'KPNA2', 'RGS14', 'ZFAT-AS1', 'PRIM1', 'MTA3', 'HAS2-AS1', 'PRINS', 'AP5Z1', 'SLAMF6', 'SP1', 'STK24', 'HLA-A', 'PRKACA', 'SCN3A', 'FAM167A', 'HSD17B1', 'FAM21A', 'HTATIP2', 'NBL1', 'SCAMP2', 'GCSAML-AS1', 'ABCB6', 'FAM181B', 'HIST1H2BL', 'KCNC4', 'C7ORF66', 'PREB', 'CYHR1', 'LCK', 'PLEKHN1', 'HMGCS2', 'HYPK', 'ERICH1', 'CA7', 'TMEM104', 'KLC4', 'HAUS6', 'CMTR1', 'WDR63', 'ZNRD1-AS1', 'DDX26B', 'WAPAL', 'CRYBB2', 'WASH2P', 'TSPAN2', 'TSPO2', 'ADAMTSL3', 'EFCAB5', 'GCNT4', 'PIGF', 'HIST1H2BO', 'CTNS', 'PSMD6', 'MAGEB16', 'CCDC74A', 'PSG8', 'SLC19A1', 'JAG1', 'PDZD4', 'CCDC149', 'GTF2E1', 'DHRS11', 'TRAIP', 'JAK3', 'ZNF281', 'GFRA1', 'SCMH1', 'ARMC4', 'CARNS1', 'NOP10', 'PPP1R11', 'CECR5', 'FAM66E', 'ADH7', 'APOE', 'ALS2CR12', 'CSPG4', 'DKFZP434L187', 'CCDC40', 'OR13G1', 'MAPK11', 'EIF3G', 'KCNH4', 'OR11L1', 'FBXL7', 'MND1', 'TSHZ2', 'SPN', 'PPFIA3', 'SEC22B', 'CYP7B1', 'MSRB1', 'SLC9C2', 'AP3D1', 'OR52D1', 'BIN3', 'COL3A1', 'NR0B2', 'FEN1', 'CR1', 'TMEM131', 'TAS1R2', 'PWRN2', 'KLHL41', 'LRRFIP2', 'SLC22A8', 'DICER1-AS1', 'FAM53A', 'KEAP1', 'C20ORF27', 'DEDD', 'SLU7', 'GTF2IRD2B', 'PHKB', 'TMEM88', 'C2ORF72', 'TRIO', 'KDELC1', 'AFF4', 'C4BPA', 'PLRG1', 'TLN2', 'C1QB', 'RNF138P1', 'CYP26B1', 'WIBG', 'BRINP3', 'RPH3A', 'ZNF713', 'VWA5A', 'UGT2B11', 'ABCC12', 'MRPL4', 'MTG2', 'CHST7', 'CENPH', 'ISCA1P1', 'RFNG', 'RANBP6', 'AQP3', 'ZNF501', 'SPAG17', 'ANKRD52', 'ZSCAN25', 'RBM25', 'MYT1', 'NGRN', 'TWSG1', 'VHL', 'PRSS54', 'FAM13A-AS1', 'ATP6V0A1', 'MYLPF', 'GRINA', 'VPREB3', 'FAM180B', 'B3GNT8', 'HDAC9', 'KIAA0226L', 'C6ORF1', 'COBLL1', 'TMEM132A', 'CLDN17', 'PLEKHG1', 'ZNF383', 'FCGR2A', 'HOXD10', 'DNAJC5B', 'XDH', 'VEZT', 'CCDC132', 'AGR2', 'FOXD4L3', 'C22ORF15', 'TPRXL', 'NDUFB6', 'C4ORF27', 'DUSP15', 'TEX29', 'CLK3', 'HABP2', 'LIG1', 'ITSN2', 'RRP7A', 'TBCC', 'HNRNPA1P33', 'FAM96B', 'STON1-GTF2A1L', 'C16ORF13', 'LCAT', 'KLHL12', 'HLA-DOB', 'EP300', 'TRIB3', 'ABCA1', 'SPINK8', 'C15ORF40', 'PCTP', 'HAVCR1', 'STEAP2', 'TRNP1', 'INTS4', 'MTSS1', 'SEC22A', 'SLC23A3', 'MT1E', 'DNTTIP2', 'MAFK', 'HAUS8', 'ERI2', 'APTX', 'AMIGO2', 'HBB', 'CCDC65', 'ARHGAP44', 'FBN3', 'CARD11', 'JSRP1', 'FAM110C', 'GDF2', 'DEPDC5', 'PTGFR', 'DEFB118', 'TMEM132E', 'DENND1B', 'C16ORF82', 'LMBRD1', 'FAM20B', 'SH3GLB2', 'PCSK9', 'SORCS3', 'MDFI', 'CX3CL1', 'KCNU1', 'AREG', 'PRSS58', 'WDFY1', 'ACBD5', 'FOXD4L5', 'CD2AP', 'RBFA', 'SNORA12', 'C9ORF163', 'PSD', 'C3ORF36', 'APOA1BP', 'BCKDHB', 'OR11H6', 'CD209', 'PNLDC1', 'TMEM14B', 'HOOK3', 'HNRNPH1', 'TTC30A', 'GCC1', 'SNORA56', 'GRIN3A', 'RHBDD2', 'LRRC30', 'USP34', 'ANKRD30BP2', 'EIF4A3', 'TRUB1', 'CDCP2', 'IL9', 'FSD2', 'SLC52A2', 'ZNF195', 'LOC145783', 'ZNF821', 'SUOX', 'HADHA', 'SGCG', 'ATP12A', 'LGALS1', 'RPS14', 'CHGB', 'TDRD5', 'CACNA2D2', 'OR5D18', 'RAB4A', 'DHX34', 'LINC00950', 'TRABD2A', 'IKBKE', 'XKR9', 'GSTM2', 'CD320', 'PCAT18', 'SUZ12P1', 'OR2T35', 'TMEM50A', 'RPL23AP7', 'E2F7', 'CASKIN2', 'CYB5D1', 'ST7-OT3', 'KRTAP5-5', 'GNG3', 'GALC', 'EPHB6', 'CAPG', 'RTCA', 'C20ORF24', 'GPHA2', 'ARL14EP', 'LAMTOR3', 'UBE2QL1', 'SCGB1D4', 'ZNF646', 'LINC01550', 'REST', 'FAM182A', 'ADGRF2', 'PLA2G16', 'C21ORF58', 'ITGBL1', 'ZYG11A', 'RSF1', 'CYP4V2', 'FAM86HP', 'TMEM150C', 'RPRD1A', 'CDC27', 'FAM66C', 'IKZF4', 'MGC27382', 'ZNF530', 'SFTPC', 'DNMT1', 'USP17L2', 'ZFP28', 'SMIM7', 'PAN2', 'C19ORF40', 'KIR3DL3', 'FNIP1', 'RAB26', 'FOXI1', 'AIG1', 'HSP90AA1', 'LOC730101', 'IQCA1', 'MAPRE3', 'CYP19A1', 'GBP7', 'CAMKV', 'GPC5', 'ZRANB1', 'CYP2S1', 'AGMO', 'KAT5', 'CDC37L1', 'LHX2', 'NCALD', 'CNGB3', 'KRT38', 'KLHL2', 'RAB25', 'HES4', 'PDE1C', 'RPAP2', 'ZNF692', 'RPA1', 'EFNA4', 'AQP6', 'FAM161A', 'LOC340017', 'BECN1', 'TAS2R4', 'TYMS', 'PCDHB5', 'SLC11A2', 'TDP1', 'PRSS45', 'CDK9', 'ABCB11', 'CYP21A2', 'RAMP3', 'SLC27A4', 'APOC1P1', 'MYO1E', 'WDR90', 'PHLDB3', 'ACRV1', 'MBOAT1', 'TAX1BP1', 'TBC1D26', 'MAGI2', 'BAD', 'CAMK2A', 'PHAX', 'DUSP5', 'IMP3', 'SSTR5', 'LOC100130691', 'COPB2', 'C1QTNF3', 'RBMS2', 'C10ORF105', 'G0S2', 'PPP1R14C', 'FOXO4', 'LAMC3', 'CRYL1', 'GPR32', 'MYO1A', 'KRTCAP3', 'TAGLN2', 'RPS6KA6', 'KRTAP10-1', 'ABCB8', 'KLK1', 'VWC2', 'TMEM214', 'CES4A', 'LOR', 'ARID4B', 'C1QL3', 'LINC01588', 'PRKCI', 'CLDN9', 'RRP1', 'ITGA9', 'ZNF845', 'LRFN4', 'HPS5', 'PLCE1', 'C7ORF60', 'CHCHD4', 'YWHAQ', 'ZNF706', 'CARD6', 'FAM201A', 'TSG1', 'TCEAL1', 'IL23R', 'CNOT3', 'WSCD1', 'MIR99AHG', 'TBL1X', 'C1ORF127', 'SYTL4', 'SSR1', 'C17ORF82', 'SDHC', 'PTRF', 'TMSB15A', 'TEF', 'LINC00479', 'GIMAP2', 'TMEM159', 'TRAM2', 'GNAT1', 'HP', 'FGD4', 'CHST1', 'PMS2P1', 'PRCP', 'AFAP1L1', 'MAST2', 'MSH3', 'ASNA1', 'ZC4H2', 'ENSA', 'PATL1', 'PPWD1', 'DEFB1', 'BRE-AS1', 'ELAVL1', 'SH3RF3', 'SLAMF9', 'NANOG', 'C7ORF57', 'CNIH4', 'LOC391322', 'TCIRG1', 'MAPK4', 'ARGFXP2', 'MAP4K4', 'POM121L8P', 'ACOT11', 'DMRTC1B', 'TAOK1', 'MYPOP', 'AP3M1', 'PLA2G12A', 'LSM1', 'ZNF738', 'ZBTB43', 'HOXD9', 'CIB3', 'ASAP1', 'MMP28', 'GOLGA2P5', 'HMX2', 'KLK8', 'TMEM179B', 'ATP6V1H', 'ARHGAP28', 'CAMSAP1', 'ASPG', 'DPH3', 'LTBR', 'TAF13', 'PRR5L', 'FAM213A', 'RC3H1', 'SOX12', 'ZNF189', 'FBXL5', 'BMS1P5', 'KITLG', 'MIR31HG', 'FAM86EP', 'BRPF3', 'ZDHHC18', 'GMCL1', 'CHN1', 'ANKHD1-EIF4EBP3', 'ACADSB', 'SYT14P1', 'ZBP1', 'CDK12', 'C1QTNF9B-AS1', 'CFHR2', 'DHRS7B', 'ATP5G1', 'PNPLA5', 'B4GALT3', 'KERA', 'CCDC115', 'KRBA1', 'WNT5B', 'SYVN1', 'ATXN3', 'METTL24', 'GTF2I', 'NT5M', 'KIAA1456', 'TBRG4', 'LCE1F', 'UTP14A', 'PEX11B', 'NELFCD', 'PSMA3', 'KIF2A', 'ANO5', 'BRF2', 'TAF1A', 'LINC00442', 'NAA15', 'SLC6A11', 'C2ORF27A', 'PIK3CB', 'SP140', 'SNAR-G1', 'LINS', 'GCHFR', 'FBXO10', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 3.1703413151269876e-15 NRMSE: 7.167042647512122e-16 MAPE: 2.730017999736949e-12 Pearson Correlation: 0.07566151965987082 Spearman Correlation: 0.061818725919275806 Coefficient of Determination: -5.849167791951543 RMSE: 1.6505351557347727 NRMSE: 0.4972989321285847 MAPE: 603.4728113637424 Predictor: ElasticNet Pearson Correlation: 0.8476381828279701 Spearman Correlation: 0.8285502681085363 Coefficient of Determination: 0.6924833100243657 RMSE: 0.3737362788603505 NRMSE: 0.0844888162903471 MAPE: 199.06069611662426 Pearson Correlation: 0.5768373387784748 Spearman Correlation: 0.44546440728687386 Coefficient of Determination: 0.3303421098953955 RMSE: 0.5160982319659019 NRMSE: 0.15549811146908765 MAPE: 194.2597171398112 Predictor: RandomForests Pearson Correlation: 0.6859343864661016 Spearman Correlation: 0.6434138814086893 Coefficient of Determination: 0.460853349819052 RMSE: 0.4948622974872876 NRMSE: 0.1118712100118204 MAPE: 178.65927227245166 Pearson Correlation: 0.5766710702838044 Spearman Correlation: 0.5047918303220739 Coefficient of Determination: 0.31884236153626233 RMSE: 0.5205107361245793 NRMSE: 0.15682757942891815 MAPE: 118.86954760245972 Protein: TP53 x_train_column_count: 1002 x_train columns: ['NR1H3', 'UBA7', 'ZKSCAN3', 'METTL5', 'MMP23A', 'RB1CC1', 'GNAS', 'AMFR', 'APOL4', 'KRTAP10-4', 'SPRR2D', 'HIST3H2A', 'TMEM101', 'LOC155060', 'FHL1', 'LENG9', 'TRIM43', 'OR14J1', 'NPPA', 'CYP26A1', 'OPRM1', 'NEUROG2', 'HDAC4', 'CDRT15', 'PBOV1', 'SNORA24', 'SH3GL3', 'ARAF', 'ICAM2', 'MYOG', 'HSF4', 'GMNN', 'IPPK', 'PCGF6', 'NEMF', 'NACAP1', 'TCP11', 'SMAD3', 'CCBL2', 'GNLY', 'TNFRSF21', 'CCL2', 'COL3A1', 'USP49', 'GNB1', 'DGKH', 'POFUT2', 'SLC10A7', 'SPTBN2', 'OSBPL5', 'NPY', 'ADAMTS12', 'IL21', 'RPS19BP1', 'C6ORF201', 'PAIP2B', 'HDLBP', 'MOAP1', 'SGK223', 'SHISA9', 'TRMT10A', 'MZT1', 'CPT1B', 'LYPD2', 'CFAP43', 'SMUG1', 'RPL22L1', 'ENDOU', 'MCF2L2', 'GPNMB', 'TAS2R7', 'ADAMTSL1', 'MAT1A', 'MYH13', 'TDRD6', 'FAM167B', 'CTSO', 'CIAO1', 'C5ORF45', 'USF2', 'FBXL20', 'ANKRD29', 'ATP6AP1', 'CCDC172', 'RPS6KB1', 'PPP1R2P9', 'POU2F1', 'BTG3', 'CWF19L1', 'HHEX', 'ABCC6P2', 'MTF1', 'SPANXC', 'IL13RA1', 'LELP1', 'PPP1R42', 'SDHAF4', 'ILKAP', 'KATNB1', 'C15ORF27', 'MTERF4', 'FKTN', 'MVB12B', 'TNFAIP3', 'DPM1', 'SFRP2', 'PRRT2', 'RAP1A', 'RHOC', 'FAM153A', 'OCIAD1', 'BACE2', 'LILRA5', 'LRRC59', 'P2RY10', 'MAGED2', 'CSNK1E', 'C11ORF52', 'HSD17B14', 'PLK1', 'RNF212', 'ZNF282', 'CHP2', 'ASB12', 'ZFP37', 'LTK', 'MPP5', 'EML4', 'AWAT1', 'SPAG17', 'RNF170', 'QRFPR', 'TEDDM1', 'SNED1', 'CSMD1', 'USP27X', 'PRKAG2', 'LINC01366', 'KLRB1', 'TTTY8', 'MSLN', 'PLK2', 'OR4K13', 'PCNX', 'CYP51A1', 'POLK', 'OR8K5', 'GFAP', 'LOC728743', 'SPATA21', 'TRAIP', 'DCK', 'GPR143', 'LCOR', 'KCNH3', 'VSX1', 'TNN', 'FSTL3', 'AMELY', 'TTTY10', 'AGBL5', 'TAS2R46', 'TMEM200A', 'EYA4', 'MYO9A', 'MRPS2', 'USP51', 'KRTAP12-1', 'LOC152225', 'PRAC1', 'OCA2', 'RNF217', 'PLET1', 'LRRC23', 'CAP1', 'TP53I11', 'AKT3', 'PECR', 'IL18R1', 'TMEM249', 'ZC3H12B', 'STARD5', 'ICOS', 'TOP2B', 'ATP2B2', 'ACOT1', 'ATP5E', 'SLC22A10', 'SRP14', 'CDH26', 'TMBIM6', 'RPA3', 'CACNG5', 'ARL4C', 'ERCC4', 'UST', 'LOC284788', 'STAG1', 'UCKL1', 'ZMYND11', 'KRTAP9-2', 'PDE6A', 'LOC340017', 'EPB41', 'OR12D2', 'ASB16', 'FDCSP', 'CWC27', 'HAS2-AS1', 'VAPA', 'FN1', 'TRAPPC9', 'LINC00964', 'C17ORF82', 'GOLGA6L10', 'ANKRD1', 'RAB22A', 'MIB2', 'LINC01300', 'SFXN2', 'PIN4', 'NOVA1', 'NPHS1', 'KRTAP12-2', 'RASGRP3', 'GSTA5', 'STK4', 'TRPS1', 'DUSP22', 'DKK4', 'SMIM4', 'MEIS1', 'MT1L', 'NT5C', 'NXPH1', 'CMTM6', 'TPRX1', 'ACAD8', 'CASP6', 'ACTN3', 'TBC1D2B', 'TCEANC', 'TUBA3D', 'TBX15', 'OGFRL1', 'TAX1BP3', 'EOMES', 'MKL1', 'RPL13AP17', 'ACVR1B', 'FAM157A', 'PTPRD', 'DENND4A', 'SLC11A2', 'SLC22A1', 'ZNF343', 'UBR7', 'ADGRE4P', 'NABP1', 'PXMP4', 'PAPD5', 'NFYA', 'PPP3CB', 'TMEM2', 'WNK4', 'ABCC11', 'MTG2', 'JAKMIP1', 'S1PR3', 'MCAM', 'UCP3', 'RND3', 'CIRBP-AS1', 'HNRNPDL', 'TDH', 'NOTCH2NL', 'LRP8', 'PRR5L', 'TTC3', 'NBEAP1', 'ISG15', 'CLN5', 'SLC27A1', 'ITGAM', 'SYCE1L', 'PELI3', 'CTXN2', 'THRSP', 'CXCL3', 'MGAM2', 'MYNN', 'FAM3A', 'LYPLA2P1', 'FBXL8', 'SH3TC2', 'COX10', 'ELOF1', 'NKAIN2', 'DCAF7', 'OR2S2', 'CYSRT1', 'ZNF615', 'RECQL4', 'KIAA1755', 'RNF180', 'RAB29', 'DDIT4L', 'STAT6', 'UTS2R', 'ADCY8', 'TCP11L2', 'HEYL', 'DKK1', 'SPTLC1', 'SPRED2', 'CHRNG', 'RALGPS2', 'MBNL1-AS1', 'TWF2', 'SPTB', 'LAD1', 'WEE1', 'UBE4A', 'ST3GAL6', 'ATP6V1E2', 'IFNLR1', 'CCDC28B', 'EIF3I', 'LOC284578', 'HSPA9', 'PGD', 'SLAMF1', 'IMPG1', 'FN3KRP', 'SMC4', 'MSL3P1', 'CAMK2N2', 'KIAA0040', 'SNORA77', 'DGKG', 'AFM', 'ZFAT-AS1', 'SIGLEC17P', 'HSD3B7', 'AQP12A', 'CSE1L', 'MAFB', 'ZNF121', 'HDAC1', 'RASGEF1B', 'ALK', 'SPINK1', 'ARHGEF7', 'BSG', 'IMPA1', 'SMPD1', 'PPP1R1C', 'RPL27A', 'ADGRF2', 'ADARB1', 'FGF13', 'PKIA', 'GPR141', 'ZSWIM6', 'BCL9', 'ELL2', 'SPATA32', 'AKR7A3', 'BRD8', 'GET4', 'SAMD4A', 'PPP1R18', 'LRRC18', 'ATP10D', 'CEP76', 'CD22', 'FRG2DP', 'MEGF6', 'KRTAP12-4', 'LOC541473', 'VIM', 'SPEM1', 'SEMA4B', 'ETF1', 'RBM26', 'SKP2', 'BLOC1S4', 'CYP4F8', 'ITPR2', 'PMF1', 'ASB3', 'URAHP', 'C12ORF54', 'KRT6A', 'TRPC6', 'FUBP1', 'SCYL2', 'NANOS3', 'HAND2-AS1', 'ACER1', 'GOLGA2P5', 'DNASE1L3', 'TSC1', 'RAG2', 'NAB1', 'KCTD18', 'HMMR', 'ZBTB26', 'PTENP1', 'SPINK9', 'MIR99AHG', 'KLHL3', 'C9', 'RAB8B', 'ZNF430', 'GABRE', 'DPPA3', 'TBC1D15', 'PIRT', 'NPPB', 'NPNT', 'SNRNP70', 'NKAP', 'PRMT7', 'LY96', 'CDC14A', 'TMPO', 'LOC100134868', 'MX1', 'FDXR', 'CUL5', 'HIST1H2AK', 'DRD5', 'SH3BGRL3', 'LY6D', 'RAPGEF2', 'APCS', 'MAPT', 'DUSP7', 'LINGO1', 'OSGEPL1', 'HSPA1B', 'TP73-AS1', 'RHOA', 'DNAJC25', 'TINAGL1', 'DOCK6', 'GGA2', 'EXO5', 'YARS', 'RHBG', 'CEACAM21', 'PHF2', 'ECHDC1', 'GPATCH11', 'HOOK2', 'TRIM7', 'PRRG3', 'TBC1D9B', 'FRS3', 'AGTRAP', 'ACTL9', 'CC2D2A', 'USO1', 'SLC25A31', 'MYOCD', 'SCN1B', 'OCLM', 'YY1AP1', 'PDCD2L', 'NXF1', 'FLJ37201', 'MIR7-3HG', 'RBM10', 'ITGAE', 'APOPT1', 'PREB', 'CBX4', 'P3H2', 'CPED1', 'ZNF43', 'KIAA0430', 'TSGA13', 'CKLF', 'IFI30', 'OLFM3', 'DCSTAMP', 'MGAT5B', 'PIH1D1', 'EDC3', 'ZMAT1', 'TBL1X', 'TEF', 'KIAA1715', 'OR5M1', 'FAM102A', 'CENPQ', 'LINC00092', 'RAI1', 'GABRA1', 'CMPK1', 'KRT9', 'OR6C70', 'ABCA5', 'C8ORF34', 'SGCD', 'TESK1', 'ODF4', 'SLC7A8', 'DAXX', 'ADGRG3', 'MUS81', 'NLGN4X', 'DMRTC2', 'RABL2B', 'SATB2', 'PKD2', 'FHDC1', 'WBSCR16', 'ANKRD20A3', 'LOC344967', 'CLPSL2', 'IGSF1', 'GPD1L', 'HACL1', 'KCNJ5', 'ATP12A', 'UGT2A1', 'PSMG3', 'PGPEP1L', 'QTRT1', 'STUB1', 'PSEN2', 'PHF23', 'CPOX', 'WASF2', 'ING1', 'DDX17', 'LUZP6', 'TMEM106A', 'C21ORF2', 'SMAD6', 'NID2', 'RPS2', 'HEBP1', 'CSF1', 'CD84', 'SLC4A2', 'KATNAL2', 'FMO3', 'CALD1', 'KLK10', 'NDUFB10', 'PIN1P1', 'NLRP12', 'FAM173B', 'USP28', 'HSPA12B', 'TRPM7', 'SAMM50', 'MT2A', 'FOXP1', 'FOLR1', 'GPR135', 'RNASE1', 'RAB2B', 'ZNF143', 'ARSG', 'ZNF490', 'EMILIN1', 'SERPINB8', 'RGS22', 'GOLGA7B', 'KIAA1024', 'XCL1', 'STT3B', 'WDR89', 'POLR3F', 'FAM133A', 'CBX6', 'STAG2', 'DIRAS2', 'LINC00937', 'EXTL3', 'C4ORF46', 'GDF2', 'RNF128', 'TNFRSF8', 'STK38', 'ZNF589', 'C2ORF15', 'COMMD2', 'FAM27C', 'KCNT2', 'BPIFC', 'CDRT4', 'ARL13B', 'BAIAP2-AS1', 'CD19', 'OR52K2', 'B3GALNT1', 'KRTAP10-5', 'CH25H', 'APBA2', 'MCF2L', 'ELL3', 'ZNF35', 'RPS6', 'OR2D2', 'KCTD2', 'PLXND1', 'SCML2', 'HDAC3', 'RAB11FIP3', 'MARS', 'SNORA71E', 'METTL21C', 'TK2', 'LINC01098', 'CCL24', 'APPL2', 'PSMC3', 'AFP', 'ARNT2', 'MIR1-1HG', 'CCDC116', 'KDM4A', 'ASIC4', 'SELT', 'ZBTB45', 'SPG7', 'OR6T1', 'SKA3', 'ZNF485', 'TLX1NB', 'TMEM62', 'LINC00662', 'HOMER2', 'PPIC', 'PRELP', 'C1GALT1C1L', 'DPH5', 'TPTE2P6', 'HIST4H4', 'UNC13B', 'RHOB', 'LSR', 'ARHGAP5', 'TMEM216', 'SLC2A6', 'TAS2R5', 'SLC35A5', 'DEFB136', 'MESP1', 'SECISBP2L', 'TMEM200B', 'ZNF157', 'MRPS15', 'SFTPA1', 'ZNF529', 'GOLGA6C', 'C11ORF70', 'CRTAP', 'SMARCC1', 'THYN1', 'ZP1', 'SFTPA2', 'SLC39A7', 'DCP1A', 'PP7080', 'TMIGD2', 'ZSCAN22', 'CHST13', 'KLF10', 'ISM1', 'RARRES3', 'LAX1', 'ACHE', 'NRAS', 'NR1D2', 'SRPX2', 'GABRA3', 'ADGRA2', 'C1ORF64', 'RGS20', 'CT45A4', 'KLF2', 'RPUSD3', 'CXXC4', 'HSPH1', 'GRIA1', 'SZT2', 'PIKFYVE', 'ELMO1', 'RPS27', 'KCNK18', 'CNOT6', 'F8A1', 'CTU2', 'LIPE', 'SFTPB', 'LINC00596', 'NAA35', 'TMEM9', 'EGFR', 'NUCKS1', 'COLCA1', 'PUS10', 'TMPRSS11D', 'WWOX', 'PAXIP1-AS1', 'C11ORF57', 'ESYT2', 'SPARC', 'ELAVL2', 'METTL9', 'ACAP3', 'RASSF2', 'TRIM24', 'TBP', 'SLC25A40', 'CSF3R', 'CFAP74', 'KRTAP10-12', 'S100A12', 'PELI1', 'ASIC3', 'LINC01588', 'ALX1', 'C21ORF33', 'LINC00162', 'NR3C2', 'MC1R', 'HLA-E', 'ARL6IP6', 'HTR1F', 'TYMS', 'IFT46', 'GPRC6A', 'SERTM1', 'CRIPT', 'MIPEP', 'ASB7', 'LINC01102', 'NEK3', 'FLT3LG', 'PLLP', 'DSCR10', 'KRTAP21-1', 'HGS', 'ETFDH', 'NCBP1', 'OR5AS1', 'PSMA2', 'CECR5-AS1', 'PROKR1', 'NFIA', 'GNGT1', 'DMXL2', 'FAM9A', 'ICA1L', 'LDLRAP1', 'GLYATL3', 'TMEM259', 'PSD', 'DCLRE1B', 'SDHAP2', 'SLC41A3', 'JARID2', 'SLC25A11', 'KIF5A', 'HDX', 'NUAK2', 'EBAG9', 'MESP2', 'SLC15A4', 'XYLT2', 'PKP2', 'ABCD1', 'MR1', 'ST7-OT4', 'BACH2', 'KLHL23', 'LOC644936', 'CD1A', 'PRAME', 'MGAT4C', 'GNA12', 'OSBPL7', 'SMCR8', 'TST', 'SPANXN1', 'FAM167A-AS1', 'MFHAS1', 'HIST1H3J', 'ZNF232', 'CDKN2A-AS1', 'SEC23IP', 'DGKE', 'EPHA1', 'FOLR3', 'GATC', 'ACSF3', 'RPL23', 'FCRL3', 'FBXO42', 'RAD21', 'LOC285074', 'ARHGAP11A', 'C1QTNF4', 'MAGEB2', 'NEUROD2', 'AKR1D1', 'SYT11', 'SOX21', 'TRIM2', 'TPD52L2', 'ASH1L', 'ATIC', 'B3GALNT2', 'HSD17B7P2', 'PIK3CB', 'CYP19A1', 'EME1', 'MOK', 'SLC6A20', 'ZNF443', 'STX6', 'OR10C1', 'UIMC1', 'HPCAL4', 'FZD4', 'ACTC1', 'TRIML1', 'UBASH3B', 'ZYG11B', 'ANP32C', 'CDC34', 'IYD', 'GSTM2', 'SIX6', 'ANKFN1', 'EZH1', 'C11ORF1', 'PKP3', 'SNAR-C4', 'CLPS', 'GUCY1A3', 'ZNF845', 'ARFGEF3', 'NFKB2', 'ZNF71', 'GNAL', 'ARGFX', 'TECTA', 'IKBKB', 'WDR37', 'TCTEX1D4', 'FEZF1', 'FBXO15', 'ZBTB22', 'LRRN3', 'KRTAP2-1', 'OSTM1', 'BNIP2', 'SLC27A6', 'KMT2B', 'ANP32AP1', 'EPYC', 'COL9A2', 'NSMCE4A', 'PIGF', 'HSPD1', 'RGCC', 'PSMA5', 'SOX2', 'MKLN1', 'ZNF264', 'CNTFR-AS1', 'C16ORF58', 'ADGRA3', 'FAM183CP', 'IFRD1', 'TAS2R30', 'JHDM1D-AS1', 'POLE', 'KDELR2', 'ZNF321P', 'MSN', 'DGUOK', 'NIF3L1', 'LVRN', 'IFRD2', 'FAS', 'HIST1H4F', 'IL1R2', 'KLF7', 'CRHBP', 'PLP1', 'ARID3B', 'NIP7', 'TFR2', 'FAM104A', 'LINC00950', 'NSUN7', 'IQCJ', 'B4GALT7', 'GLUD2', 'TBX22', 'FKBP9', 'C9ORF43', 'ZNF138', 'GMIP', 'KLHL15', 'ARAP3', 'JAZF1', 'SALL3', 'SASH3', 'AVPR1B', 'CSRNP1', 'GCSAM', 'POLD4', 'SF3B3', 'ELK3', 'ELAVL4', 'NCSTN', 'UNC5D', 'YIPF6', 'OR51G1', 'CPSF3L', 'RUSC1-AS1', 'C19ORF44', 'CIDEB', 'TMEM160', 'GNG3', 'TGM7', 'SSR3', 'DZIP1', 'RCBTB2', 'SLC26A1', 'PPM1B', 'DERL2', 'PRSS37', 'EXOSC8', 'PRPF38A', 'ELF1', 'SNORD22', 'SNORA5A', 'HSD11B1L', 'NOL8', 'LMBR1L', 'DSG2', 'LYL1', 'PIPSL', 'MACROD2', 'CEP97', 'GAS8', 'TCF7', 'CORO1A', 'PRR16', 'TMX1', 'POLR2M', 'NDUFA13', 'PIP5KL1', 'CD4', 'DNAAF3', 'NUDT6', 'C7ORF73', 'PRR23C', 'H3F3B', 'CCBL1', 'EXOC3L1', 'SETDB2', 'FAM214A', 'OR51F1', 'RHOBTB2', 'SEC23B', 'MAP1LC3B2', 'IL3RA', 'CCL16', 'TFB1M', 'WASF1', 'FAM71F1', 'WDR18', 'PPP1CA', 'B3GAT3', 'CLEC4D', 'CRY2', 'RNLS', 'PCDHA12', 'C17ORF59', 'TEFM', 'ERRFI1', 'ZNF781', 'AJUBA', 'ZNF815P', 'SFMBT1', 'SLC25A6', 'SERP2', 'LOC100192426', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.8778105470658515e-15 NRMSE: 4.512882833611756e-16 MAPE: 5.863338747517405e-12 Pearson Correlation: 0.14172116503534496 Spearman Correlation: 0.15446826020274568 Coefficient of Determination: -1.3259786430570362 RMSE: 0.6585639032269422 NRMSE: 0.20898829119920734 MAPE: 578.4271940304458 Predictor: ElasticNet Pearson Correlation: 0.8476986282509374 Spearman Correlation: 0.7883387558429992 Coefficient of Determination: 0.6816507209691134 RMSE: 0.25396825619526353 NRMSE: 0.06103538961674202 MAPE: 351.2622832620302 Pearson Correlation: 0.5002590793368489 Spearman Correlation: 0.4329305851693912 Coefficient of Determination: 0.24359642996673392 RMSE: 0.37555352817247084 NRMSE: 0.11917794115653428 MAPE: 337.8413128013252 Predictor: RandomForests Pearson Correlation: 0.6739402854854618 Spearman Correlation: 0.5804706499205422 Coefficient of Determination: 0.37722676103740227 RMSE: 0.3552159618627673 NRMSE: 0.08536793123354178 MAPE: 587.9809267444033 Pearson Correlation: 0.5992225845970683 Spearman Correlation: 0.46342971857504467 Coefficient of Determination: 0.28594889577327254 RMSE: 0.3648881074526256 NRMSE: 0.11579338266458035 MAPE: 200.5551444028586 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['SMPDL3B', 'INHBC', 'LIPK', 'TOMM70A', 'GAB3', 'CGNL1', 'ARGFXP2', 'CMTM6', 'TFB2M', 'SPINK13', 'KCNJ1', 'GEM', 'TMEM39B', 'ZNF24', 'ERBB4', 'PZP', 'OLMALINC', 'THBS4', 'PNO1', 'FBXL13', 'MGC16275', 'TSGA10IP', 'EFCAB1', 'EIF2B1', 'DDX31', 'ANTXR1', 'TBX5', 'DLC1', 'STXBP1', 'ATP5G2', 'TCEANC2', 'POLA1', 'PDXDC2P', 'ZFHX4-AS1', 'USP37', 'FKBP2', 'CSNK1G2', 'PRSS3P2', 'DGKI', 'FOLR1', 'TMEM57', 'VENTX', 'USP25', 'SRRD', 'PRDM13', 'EPHB4', 'SPOCK1', 'SGCB', 'ZIM2', 'SLC39A11', 'ZNF224', 'INSRR', 'CARNS1', 'CHD6', 'EPS15', 'LAPTM5', 'XRCC6P5', 'CCNYL1', 'FAM43A', 'PQLC2L', 'DOHH', 'CCT6B', 'TRIM22', 'PLCB3', 'GLYR1', 'SMEK3P', 'MCCC1', 'SFSWAP', 'FGFR1', 'SLC20A1', 'LRRC39', 'PCDH9', 'KBTBD7', 'QSER1', 'ZSCAN20', 'DEFB126', 'ATG3', 'FAM76B', 'THAP2', 'OR52N1', 'MTR', 'SDC1', 'SLC7A8', 'SSMEM1', 'NR5A1', 'UBXN2A', 'KCNIP1', 'ATP8B1', 'PMVK', 'TXNL4B', 'ZDHHC4', 'HOXA4', 'SMAD6', 'CTSC', 'GPR75', 'MTERF3', 'TVP23A', 'ASH2L', 'WNT10B', 'GAS7', 'C18ORF42', 'GPR137C', 'QTRTD1', 'LOC728392', 'GORASP1', 'SOGA3', 'SCYL3', 'RCE1', 'EFEMP2', 'WEE2-AS1', 'ALG5', 'MRC1', 'POLE', 'USP39', 'MS4A8', 'RAB3D', 'BNIP3L', 'SUPT5H', 'PNMAL2', 'CAD', 'ANKRD45', 'PCAT18', 'FOXN4', 'NCDN', 'PMCH', 'C8B', 'TM9SF4', 'NAP1L6', 'NR5A2', 'CEP112', 'ADCK5', 'MND1', 'C9ORF129', 'TMPRSS9', 'OR1M1', 'MOB3B', 'C3ORF67', 'ZNF449', 'GBP7', 'LRR1', 'DYM', 'FBXO43', 'HSD17B10', 'REV3L', 'ZNF256', 'WNK1', 'IQGAP2', 'EGFL7', 'OR9Q1', 'C20ORF195', 'SFRP5', 'AP4S1', 'ZNF322P1', 'KRTAP21-1', 'RBM14', 'PAH', 'SELENBP1', 'PARD6G-AS1', 'CRISP2', 'GOLGA6B', 'CUEDC2', 'CTBP2', 'INSC', 'COMMD5', 'FAM185A', 'CAPN11', 'MRPS16', 'NEUROG3', 'HLA-DOB', 'ARID4A', 'PSMD12', 'ERF', 'LRRC15', 'DEGS2', 'CDK1', 'HJURP', 'CYBA', 'CYTL1', 'ABCC8', 'TMED6', 'WDR55', 'CCDC110', 'TPSAB1', 'KCTD11', 'PLCXD3', 'OR10S1', 'CHRNB3', 'LEFTY2', 'TNFRSF10B', 'LZTFL1', 'MFSD2B', 'FAM58A', 'ZNF853', 'MAP3K14-AS1', 'PI4KAP1', 'NUP155', 'TIMM22', 'TAS2R30', 'TMF1', 'MCEE', 'PRMT1', 'PRG3', 'ZNF493', 'WLS', 'PRR18', 'ASB12', 'MYL6', 'FAM71E2', 'SMC1A', 'VGF', 'JAKMIP3', 'ZSCAN26', 'TRMT44', 'PHPT1', 'GFRAL', 'TMEM181', 'C14ORF93', 'CAMKMT', 'ABT1', 'KCNRG', 'SYNJ2', 'KRTCAP2', 'LOH12CR1', 'AAED1', 'ATP5C1', 'HABP2', 'LMNTD2', 'RNF186', 'MYO1E', 'MBD5', 'LINC00922', 'SNRNP35', 'CD160', 'RPLP1', 'EFNB2', 'OSMR', 'TRIM29', 'NELFB', 'PRSS12', 'PTCHD3', 'LEO1', 'C22ORF34', 'SERPINB1', 'NAV2', 'FXR2', 'ATM', 'PROSER2', 'LHCGR', 'PALMD', 'TRIM60', 'ARHGDIB', 'STARD6', 'KRTAP10-6', 'IFT43', 'POLR3K', 'MAP3K15', 'LINC00189', 'NUDT1', 'NSUN5', 'CLEC1B', 'NAGLU', 'FAM149A', 'IGIP', 'PDLIM3', 'MAPKAPK3', 'C4ORF45', 'L1CAM', 'HIST1H2AA', 'HIST1H1C', 'C9ORF114', 'CAMKK1', 'MEF2BNB-MEF2B', 'VENTXP7', 'NDUFB4', 'IL12A', 'SAMD1', 'KATNAL2', 'GCLC', 'LINC00294', 'ING3', 'G6PC3', 'CFI', 'DHRS7', 'TRIM75P', 'CDH11', 'RELT', 'LOC285847', 'MMP28', 'RPL13P5', 'TOMM7', 'CCNY', 'HAND1', 'CELP', 'RNASE13', 'AMN1', 'KDR', 'CTPS1', 'CPA5', 'MED10', 'MLIP', 'TRABD2A', 'NOP16', 'IVNS1ABP', 'EIF4G3', 'INAFM1', 'NINL', 'RPS3', 'NUTM2A-AS1', 'RABAC1', 'EMX1', 'KLK4', 'KCNG3', 'IFNW1', 'PART1', 'GABRE', 'ADGRD1', 'GGA1', 'SLC26A1', 'MOV10', 'SPTBN4', 'TMEM127', 'SNORA44', 'RNF145', 'TMEM169', 'CT47B1', 'B2M', 'NEK3', 'PAAF1', 'SMG1P3', 'AGRP', 'ZNF561', 'IKBKB', 'C19ORF33', 'CCDC66', 'DDX24', 'ANKRD44', 'F2RL3', 'DMXL1', 'MDN1', 'LOC553137', 'VPS41', 'CEACAM22P', 'AARSD1', 'PRKCDBP', 'DNAJC17', 'AHNAK2', 'KIAA2013', 'ZNF345', 'HHIPL2', 'ITGB1BP1', 'BAIAP2-AS1', 'USP33', 'SEC24C', 'HDAC8', 'OR7G2', 'KCNIP2', 'CRAT', 'SLC2A4RG', 'TMEM140', 'ANKEF1', 'SNX10', 'SLC2A5', 'KIF3B', 'KCNK9', 'CCDC67', 'ALDH1A2', 'RETN', 'RAB2B', 'AGBL3', 'SDR39U1', 'CEP57', 'A2M-AS1', 'BUD13', 'SOX2-OT', 'WFDC9', 'MAML1', 'NTRK1', 'CACHD1', 'ARPC3', 'ZNF429', 'ZNF841', 'TPK1', 'FNDC3A', 'CDH10', 'PNLIPRP2', 'AQP8', 'PROSER1', 'SWI5', 'SLC38A3', 'TWF2', 'GOLGA2P5', 'ABCA13', 'WDFY2', 'FAM71E1', 'ANO8', 'ATP5G1', 'NDUFB1', 'UNC5C', 'MAGI1', 'LINC00602', 'FAM90A7P', 'SLC25A2', 'SAMM50', 'TMEM248', 'TBC1D16', 'HS6ST3', 'MCMBP', 'LILRA6', 'SHISA6', 'LAMTOR3', 'CIPC', 'COPE', 'ARID2', 'TUBA3E', 'KLHL35', 'ASB17', 'SLC45A3', 'ZNF699', 'ARHGEF25', 'CSTF2T', 'ZNF138', 'PTDSS2', 'ZNF101', 'C22ORF15', 'GPR171', 'SEPT2', 'ADAL', 'CCDC169', 'MTVR2', 'LRP12', 'NELL1', 'PARG', 'BRDT', 'SNAPC5', 'PAFAH1B3', 'LRRC32', 'SPANXN1', 'CHST3', 'MARCH5', 'DUSP7', 'CLDN7', 'ATP5L', 'PAX2', 'KRTAP10-9', 'RAD51D', 'SLTM', 'B4GALT6', 'PRAF2', 'GRXCR2', 'ANKRD55', 'FICD', 'VAMP3', 'PRKAR2A', 'PFAS', 'HLA-DRB5', 'PIR', 'ZNF426', 'EPN1', 'WNT7A', 'LY6G6E', 'FEZF2', 'USP3', 'SHROOM2', 'MRPL42', 'NEUROD1', 'CYP4F2', 'OR6C75', 'ZMAT4', 'CCDC171', 'LBX2-AS1', 'BCL2L2', 'KCNN1', 'THAP5', 'DIAPH2', 'PLTP', 'LINC01144', 'KLHDC9', 'PNMAL1', 'AMMECR1L', 'SEPT4', 'PCDH20', 'CBLN4', 'ICMT', 'AGAP3', 'KRTAP27-1', 'TMEM42', 'OR4F17', 'HLA-DQA1', 'TH', 'DCAF11', 'SPHK2', 'CXADRP3', 'FOXO1', 'CELA1', 'SNORA70B', 'MED7', 'SERPINB5', 'ADAMTSL3', 'CGB2', 'CNST', 'HSF2', 'CAPSL', 'C19ORF66', 'TMEM138', 'ANKRD33', 'USP5', 'ABCA2', 'TIMM10', 'EMC8', 'MARCKS', 'SRXN1', 'INPPL1', 'MBLAC1', 'LAS1L', 'SNX2', 'TDH', 'SBNO1', 'RNF13', 'TEX29', 'TTLL5', 'GMPR', 'DHDDS', 'ARHGAP9', 'BAGE2', 'PYROXD1', 'PIGC', 'MPLKIP', 'CECR1', 'C17ORF75', 'ISLR', 'NOMO3', 'S1PR2', 'COG5', 'CNIH2', 'SETD8', 'NR4A1', 'P2RY12', 'PAK2', 'CT47A11', 'PRPS1L1', 'PHLPP2', 'DMGDH', 'HBG2', 'LGI4', 'OR10T2', 'CD1B', 'TAC3', 'SNORA20', 'TRAP1', 'ZBTB41', 'GPD2', 'RRN3P3', 'PTPRK', 'COPA', 'FOXD4L3', 'RAB4A', 'ANKRD34A', 'ADGRG2', 'ZNF346', 'TYW3', 'APOA1', 'ZMYND19', 'TFAP2A', 'NCF4', 'HIST2H2AB', 'TMEM254', 'HAUS4', 'MLYCD', 'TNFRSF1A', 'SMG5', 'MKRN2', 'OVGP1', 'FDCSP', 'POLR2J4', 'MGME1', 'HDAC6', 'HTR4', 'FAM195A', 'SIKE1', 'KRTDAP', 'RAB37', 'UGGT1', 'AOC3', 'ECI2', 'TRIM44', 'CEP170B', 'ITIH6', 'ADRA2A', 'LOC389033', 'EDNRA', 'HNRNPL', 'EI24', 'EMC6', 'NCOA5', 'NAA40', 'PERM1', 'VWA5B2', 'RBP7', 'DENND6B', 'MYL9', 'DXO', 'NOG', 'ZCRB1', 'TLK2', 'LYSMD3', 'MCHR2', 'ENOSF1', 'TPGS1', 'HSD52', 'ANP32A', 'TNFAIP6', 'HIC1', 'KIFC1', 'MS4A5', 'MAOA', 'HHATL', 'OSBPL6', 'SEC11C', 'TBL1XR1', 'POM121L12', 'ARID3A', 'ECHS1', 'FAM90A1', 'ARHGAP32', 'C6ORF106', 'TMEM200B', 'TRIM66', 'PDCD2L', 'NFASC', 'INO80B', 'FAM71B', 'MAP2K1', 'DSPP', 'KLHDC7A', 'SNORA24', 'UBQLN4', 'OTUB1', 'DUS1L', 'LHFPL2', 'SLC7A5', 'STX3', 'RAB3IL1', 'ATG10', 'SEC61A1', 'SLCO4C1', 'ERO1LB', 'RARG', 'KLHL7', 'ZNF252P-AS1', 'MAGT1', 'JAG2', 'HTRA2', 'LYN', 'PCNA', 'COA5', 'RAD18', 'LOC286359', 'PSIP1', 'HCG11', 'NDUFB2-AS1', 'GYPE', 'MFI2', 'CKAP2L', 'SLC7A13', 'NDUFS3', 'WFDC2', 'MFSD7', 'SLC9C1', 'KLHL28', 'ZNF792', 'CXCL9', 'FDX1L', 'PDHA2', 'NR1I3', 'TM9SF3', 'BAD', 'FAS', 'KLHL34', 'TAB2', 'SH3GL3', 'SLC25A3P1', 'CFAP57', 'ZNF572', 'WBSCR22', 'CROT', 'CYP2C9', 'PPP2R1B', 'PJA2', 'LINC00705', 'NUTM2A', 'OXGR1', 'PCDHB10', 'NUMB', 'PLCG2', 'ABCB5', 'NEUROG2', 'TINF2', 'DPY19L2P1', 'SLC35G3', 'HTR3A', 'CLIP4', 'RGS16', 'GDPGP1', 'ZSCAN16', 'LOC400043', 'APRT', 'ADAD2', 'C20ORF85', 'PVT1', 'CSTF2', 'FGR', 'EBF1', 'BET1P1', 'ZNF826P', 'OR51V1', 'GIMAP1', 'UNC119B', 'METRNL', 'SMARCA2', 'USP28', 'RNF44', 'B4GALT1', 'GMFB', 'RDH16', 'SLC5A6', 'DPCD', 'MICU2', 'TRAF3IP3', 'MYBL2', 'TMCO3', 'TCF20', 'KCNK15', 'SYT8', 'RASA4CP', 'CRYZL1', 'ATP8B4', 'AIDA', 'STRN', 'HGS', 'ADGRB1', 'MUC7', 'TERC', 'NKX1-2', 'CKMT2', 'KIAA1804', 'PMS2', 'MADD', 'HSD17B3', 'SLC25A15', 'H2AFX', 'DGCR5', 'DHRSX', 'TMEM14E', 'XYLT1', 'CCNO', 'MEF2C', 'TMEM216', 'SAC3D1', 'CLPSL2', 'PTPDC1', 'NF1P2', 'FOXA3', 'MEF2A', 'CHCHD7', 'NPDC1', 'LINGO3', 'POLD2', 'LGI2', 'OMP', 'KCNB1', 'RBM10', 'BBX', 'OR2A9P', 'SLC25A3', 'SUMO2', 'AR', 'GMPS', 'FGA', 'COL18A1', 'OGFOD1', 'ACSL6', 'SNORA80A', 'ZSWIM4', 'SLC19A1', 'FBXL5', 'SIGLEC15', 'TBC1D8', 'AASDH', 'SSBP2', 'FOXQ1', 'NUBP2', 'SLC22A18', 'GLRX', 'ZNF500', 'CCDC127', 'SPATA45', 'IGSF22', 'CCDC120', 'ST3GAL4', 'DHRS12', 'LOC100287704', 'LLGL2', 'ZDBF2', 'RNF7', 'CLSTN2', 'ATL2', 'PDZD4', 'PBDC1', 'ZNF805', 'CNGB1', 'TMEM200C', 'CYP27B1', 'CINP', 'INO80C', 'SNTB2', 'PORCN', 'OR8B12', 'LOC641367', 'TISP43', 'SNORA15', 'DMP1', 'CASC2', 'DSCR4', 'MARVELD2', 'R3HDM4', 'LOC100130417', 'ZBTB5', 'GPRC5B', 'IFNGR2', 'B3GALT5-AS1', 'KRT31', 'C2ORF81', 'CLCC1', 'ADAM3A', 'CTSL', 'MOGAT3', 'ALPP', 'CNTN6', 'TMEM190', 'LINC00235', 'SNAR-A13', 'CREG1', 'QDPR', 'MRPL32', 'USP6NL', 'MARC2', 'UGT1A1', 'ZFY', 'ARHGAP15', 'PARP10', 'TSHZ1', 'TMEM41B', 'C1RL', 'C9ORF135', 'BST1', 'DEK', 'CDCA3', 'SNX1', 'N4BP2', 'KCNMB1', 'FGF7', 'ZNF707', 'FAM122A', 'FERMT2', 'ZNF286B', 'C12ORF77', 'USP24', 'ELAVL3', 'MCRS1', 'CCDC54', 'MRPL15', 'CCND3', 'SNURF', 'NDUFV3', 'RADIL', 'HYPM', 'NSFL1C', 'STK36', 'OR5L2', 'RAB40AL', 'FUCA1', 'SRP19', 'KIAA0040', 'FCRL1', 'SLC31A1', 'PLP2', 'SP5', 'DEFB128', 'USF1', 'POLR2K', 'RPL39', 'IP6K1', 'P3H1', 'BRAP', 'SLC9A7', 'KNSTRN', 'FAM110B', 'GFM2', 'NXF4', 'LOC143188', 'PCDHA5', 'FIBCD1', 'GLUD2', 'NFAT5', 'SNORD8', 'TMEM37', 'PAIP1', 'C10ORF11', 'GOT2', 'MORC1', 'ARL13A', 'TMEM63B', 'MRPL37', 'LIPI', 'SLC25A53', 'C2CD4D', 'NRM', 'KBTBD13', 'AKR7A2', 'RTN3', 'RPP38', 'AIM1L', 'CHRNB4', 'COLEC10', 'CHIC2', 'FBXO15', 'ACP5', 'CHADL', 'JAG1', 'SERPINA7', 'IWS1', 'HDDC3', 'POLR2H', 'RABGGTA', 'PIK3CB', 'LINC00483', 'AZGP1', 'NOL8', 'MCOLN3', 'CALCB', 'OR5A1', 'IL22RA1', 'BPI', 'TMEM120A', 'ZMYND10', 'RHOV', 'FMNL1', 'FLJ36777', 'OR2V2', 'HMSD', 'OR6C76', 'SIAH2', 'GGT6', 'CCSER1', 'FKBP1B', 'TSIX', 'STXBP5L', 'PWARSN', 'IRAK1BP1', 'YME1L1', 'PLA2G16', 'ASNSD1', 'COMT', 'RIPK4', 'GALP', 'NANOG', 'PPP2CB', 'TTC36', 'SYNPO2L', 'TCEAL3', 'SNORA61', 'HNMT', 'SERPINA10', 'RPL39L', 'SPTBN2', 'NINJ1', 'C12ORF60', 'ACAD8', 'KBTBD12', 'CENPK', 'CYP2S1', 'TRAPPC13', 'PLB1', 'GBP1P1', 'TRPV1', 'GPN3', 'PAPD4', 'EPB41L4B', 'CCT8', 'TCF7', 'PARD3B', 'TAS2R16', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 2.7930450363298065e-15 NRMSE: 6.745833823615609e-16 MAPE: 1.666109375547317e-12 Pearson Correlation: 0.20710485460636976 Spearman Correlation: 0.28436514170999644 Coefficient of Determination: -1.0729294347611584 RMSE: 1.1553472868383854 NRMSE: 0.24290372694440865 MAPE: 781.5932765109486 Predictor: ElasticNet Pearson Correlation: 0.8824939790102487 Spearman Correlation: 0.8736544314301953 Coefficient of Determination: 0.7359051577254865 RMSE: 0.3656033784725809 NRMSE: 0.08830146325779657 MAPE: 253.04207396750024 Pearson Correlation: 0.2967543467181515 Spearman Correlation: 0.3242658886021023 Coefficient of Determination: 0.020111701054762565 RMSE: 0.7943439194634552 NRMSE: 0.16700528119238398 MAPE: 491.0551520319279 Predictor: RandomForests Pearson Correlation: 0.5841613029475643 Spearman Correlation: 0.5736643049004692 Coefficient of Determination: 0.29228762035964473 RMSE: 0.5984923957807516 NRMSE: 0.1445494144963655 MAPE: 522.2372776821732 Pearson Correlation: 0.30324298723854254 Spearman Correlation: 0.23249915834362028 Coefficient of Determination: 0.012892563001911883 RMSE: 0.7972646376894452 NRMSE: 0.16761934187398983 MAPE: 584.7623793779046 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['IFT74', 'GBA', 'ZNF679', 'HNRNPH1', 'KCNMB1', 'KEL', 'OR56A1', 'CCDC43', 'C6ORF201', 'LBX1', 'CECR7', 'GABPA', 'SNHG6', 'EFCAB14', 'BHLHE41', 'BAG2', 'BUD13', 'SPAG8', 'ZNF335', 'TMEM207', 'F2', 'C5ORF15', 'MXRA5', 'MRPL57', 'PCBP3', 'GLMP', 'ADAM6', 'TMPRSS3', 'HEPHL1', 'DIP2B', 'OR10H5', 'DBNDD2', 'SNX25', 'GALNT12', 'C8ORF22', 'EMP1', 'FAN1', 'NAGS', 'NR1I2', 'GPR82', 'FASTKD3', 'VNN1', 'SEC61A2', 'COX8A', 'MAP1A', 'METTL9', 'SSH1', 'FAM72B', 'ATP5E', 'GKN2', 'OR4F21', 'NSUN2', 'IL18RAP', 'GJA8', 'HSPA1B', 'COX4I2', 'LRRC30', 'OR4A15', 'NKX3-1', 'PLXNB2', 'PTS', 'HYAL1', 'GPR153', 'CEP295', 'SNHG3', 'RC3H1', 'RCN2', 'TSHR', 'RRP8', 'CPT1B', 'QPRT', 'ZBTB11-AS1', 'DPPA4', 'ASL', 'PCBD2', 'GCNT3', 'BMP2', 'ANKRD29', 'FAM179B', 'PPP1R8', 'DYNLL2', 'HIST3H3', 'FAM228A', 'NUDT13', 'IGF2-AS', 'CFAP20', 'TRIM37', 'TIGD7', 'IAH1', 'WDR25', 'PTTG2', 'FAM157A', 'GFRAL', 'LOC283332', 'NOX1', 'HIST1H1B', 'NFIA', 'EVI2A', 'CNNM4', 'OTUD7A', 'KCNH8', 'TAPT1', 'C11ORF53', 'TBX21', 'KIF2A', 'GALR2', 'NRSN1', 'C1ORF159', 'TMC8', 'OVCA2', 'ZNF860', 'PDCL3P4', 'NOM1', 'ATP6V1G2', 'USP6NL', 'TPP1', 'TRAPPC6A', 'NDP', 'LINC00934', 'SLC7A5', 'PDP1', 'SERPINI1', 'WSCD1', 'ACADVL', 'RUNDC1', 'HMHB1', 'G0S2', 'LOC340357', 'ARL5A', 'FREM2', 'SHARPIN', 'OIP5-AS1', 'CEP95', 'LMNA', 'FRYL', 'METRNL', 'OR2W1', 'PADI4', 'ACYP2', 'FAM149B1', 'SEC24D', 'HKR1', 'SLC11A2', 'HABP2', 'CPEB4', 'ATP9B', 'TWIST1', 'IL7R', 'MTIF2', 'IFITM4P', 'KLHDC2', 'GNAS', 'CNNM1', 'HGS', 'GYS1', 'TFE3', 'ZNF568', 'BDH2', 'BMP8B', 'GPR31', 'SUMF2', 'TECPR2', 'GPX2', 'NSUN5P1', 'NXT2', 'NTRK2', 'LRRC20', 'PEBP4', 'COL1A2', 'RAB33B', 'DHX9', 'ANAPC7', 'GPRC5B', 'LINC00029', 'SNX4', 'TK1', 'LINC00152', 'ZNF7', 'RPL6', 'RPL13AP3', 'PDE6G', 'PCBP2', 'FLJ13224', 'ARHGAP19', 'FAM8A1', 'FOXN2', 'HSD3B7', 'KBTBD8', 'ZFP41', 'CCDC88C', 'SLC8A3', 'COX19', 'OLFM2', 'GNPDA1', 'ATP10D', 'C1QC', 'THBS3', 'LOC441454', 'TULP1', 'LINC00887', 'STAB1', 'B3GNT8', 'MFNG', 'FAM155A', 'ZBTB48', 'AK9', 'WDPCP', 'RBM12B-AS1', 'SNRNP25', 'CCDC106', 'PTGER1', 'ZNF813', 'INPP1', 'INAFM1', 'CCR9', 'DBT', 'GATA3', 'HIST1H1C', 'PPP6R2', 'CPN2', 'LOH12CR1', 'SLC39A1', 'TDRD10', 'C15ORF62', 'AP1S2', 'GAB4', 'ZNF346', 'SLC41A1', 'NCAPD3', 'RPS26P11', 'LOC644936', 'MAPRE3', 'LSM11', 'WRB', 'PSMD11', 'CYP4F12', 'FAM122C', 'ATP7B', 'PRSS35', 'ZSCAN21', 'MILR1', 'ELOVL2', 'TNFSF13', 'LKAAEAR1', 'KRTAP5-7', 'SUPT20HL2', 'INTS10', 'KLF4', 'PER1', 'DNAJC14', 'FAM86C2P', 'SGMS2', 'PCCB', 'IVD', 'IK', 'EPS8', 'A2M', 'CHRNA4', 'ARHGAP10', 'TCP1', 'PPARGC1B', 'DEFB109P1B', 'SMCO2', 'PPIP5K1', 'ALCAM', 'DNAJC18', 'FBXO34', 'LIN7B', 'GLTSCR1', 'KLC2', 'JAG2', 'RPP25L', 'NUP160', 'C19ORF18', 'NACC1', 'ZNF844', 'TMEM218', 'DEFB104A', 'ZFP37', 'SRSF2', 'CALCOCO2', 'PARL', 'IL6ST', 'CBX5', 'CSNK1G1', 'SYT8', 'ACAA2', 'AP1M2', 'PIR', 'SPEF1', 'TSPAN8', 'GPX6', 'MAGEE1', 'PSMB2', 'CRHR1', 'SSX5', 'AGAP6', 'PXT1', 'CEBPA', 'ARMC6', 'CASQ1', 'RIPK1', 'TMC6', 'FAAH', 'ACBD5', 'OPRL1', 'STAG2', 'KRTAP10-6', 'TMEM136', 'PPIL3', 'GATAD2B', 'SLC9A6', 'DEPDC1', 'LINC00999', 'BPGM', 'GANC', 'MADCAM1', 'TMEM132C', 'SMG1P2', 'GOLGA6L9', 'C9ORF47', 'LMO2', 'CLDN18', 'TIPIN', 'TRMT10A', 'WDR62', 'YJEFN3', 'TRIP6', 'CD63', 'TRIM34', 'DLG1', 'SLC25A30', 'FAM110C', 'UBR4', 'ZDHHC7', 'TEX33', 'TMEM74', 'NR5A1', 'ATP4B', 'IGDCC3', 'OR6B2', 'TCEA2', 'KLHDC7B', 'LINC00094', 'C9ORF78', 'PPIE', 'SCGB1B2P', 'PTCHD4', 'CNIH3', 'OR6Y1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.9488881165962246 Spearman Correlation: 0.847494444752475 Coefficient of Determination: 0.9003886571910118 RMSE: 0.15932263577010014 NRMSE: 0.03844936548739053 MAPE: 39.21984352736088 Pearson Correlation: 0.29463375763291483 Spearman Correlation: 0.3251786181872592 Coefficient of Determination: -9.744933034752648 RMSE: 1.481934035284976 NRMSE: 0.6047229393964646 MAPE: 229.81818345146786 Predictor: ElasticNet Pearson Correlation: 0.8795535933648402 Spearman Correlation: 0.748667274243067 Coefficient of Determination: 0.7661117840978053 RMSE: 0.24413343165872842 NRMSE: 0.05891677285004426 MAPE: 56.65045332826747 Pearson Correlation: 0.7815009480336775 Spearman Correlation: 0.5721343158892256 Coefficient of Determination: 0.6053849947585415 RMSE: 0.28399703998194364 NRMSE: 0.11588877825101758 MAPE: 80.93964757785876 Predictor: RandomForests Pearson Correlation: 0.8578915392547068 Spearman Correlation: 0.7170608720139723 Coefficient of Determination: 0.7308721588674334 RMSE: 0.2618800403007401 NRMSE: 0.06319956567819583 MAPE: 54.94658315076215 Pearson Correlation: 0.8425915313261115 Spearman Correlation: 0.7090996731467817 Coefficient of Determination: 0.7011836593347336 RMSE: 0.24713211583283745 NRMSE: 0.10084555448985452 MAPE: 74.1865998397117 Protein: CCND1 x_train_column_count: 859 x_train columns: ['SIRT6', 'HEATR3', 'FOXO3B', 'CBR1', 'LRIG2', 'SHQ1', 'DERL3', 'PVR', 'SPZ1', 'NUDT2', 'FAF2', 'KIN', 'FGF1', 'DYM', 'PIP5KL1', 'CDCA8', 'TRABD', 'LOC100190986', 'SPATA20', 'SNORA32', 'SNORA66', 'RMRP', 'POLD1', 'PIH1D1', 'ASAP2', 'ZNF549', 'MFSD2B', 'TIGD7', 'DMXL2', 'SH3PXD2A', 'OR7A10', 'PRAMEF11', 'RPS29', 'CLUL1', 'APP', 'WFIKKN2', 'PMM1', 'PODXL2', 'CRNKL1', 'KCMF1', 'TAF1C', 'HDDC2', 'TRIM77', 'BIRC8', 'HIST1H3G', 'PDE1C', 'CCR3', 'GRIP2', 'PCNAP1', 'ZSCAN30', 'FCRLA', 'SEZ6L2', 'XPO5', 'TANK', 'L3MBTL2', 'SPP2', 'GOLPH3L', 'CCNL1', 'QRICH2', 'PCNXL3', 'SEC23IP', 'TOPORS', 'RPL38', 'INPP5A', 'FBXO5', 'HAUS6', 'ZNF446', 'FADS6', 'GTDC1', 'SERPINB11', 'PTPRU', 'SPINK2', 'AEBP1', 'CDHR3', 'ELMOD1', 'TRAPPC2L', 'ENTPD2', 'RNASEH2B', 'ETFDH', 'RPS10', 'RECQL5', 'ZNF292', 'P2RY2', 'COLCA1', 'ATP5H', 'DGCR5', 'SNAP25', 'MSLNL', 'PTP4A1', 'IMPA2', 'TBC1D24', 'PABPC1P2', 'LY9', 'GAL', 'USP13', 'MRPL36', 'HRSP12', 'ZCCHC5', 'TMEM150B', 'RP9', 'MGST2', 'DLD', 'ZNF296', 'RXRB', 'CD59', 'SLC38A9', 'CLDN7', 'TRIM38', 'GSTT1', 'GNG7', 'IL3', 'EIF3J', 'TMED3', 'SRP68', 'C8ORF22', 'DCP2', 'GTSE1-AS1', 'GABRG1', 'RALGAPB', 'PALMD', 'OR5V1', 'MRS2', 'PRKRIP1', 'AQP1', 'GOLM1', 'TOLLIP', 'PPP1CC', 'IKZF1', 'KHDRBS2', 'BNIPL', 'APOL5', 'PLXNA4', 'IFT27', 'RNF167', 'BRICD5', 'PEF1', 'NXPE4', 'SFT2D2', 'CCBL1', 'ITGA3', 'RSPO1', 'KIAA1715', 'KDELR2', 'NDRG3', 'LINC00319', 'DUSP15', 'RHAG', 'SLC41A2', 'SLCO1B7', 'HELT', 'SS18', 'PAPOLG', 'ADRA2A', 'PRB2', 'EHMT1', 'VPS13A', 'CLDN16', 'RSC1A1', 'MT1M', 'LMX1A', 'EIF1AD', 'ZNF667', 'MARK2', 'GALR3', 'SULT1A3', 'CDC7', 'LRRC30', 'CREBL2', 'C7ORF49', 'MAD2L2', 'TSNAX-DISC1', 'NT5C1B', 'MAPK1IP1L', 'GDF6', 'EPHA10', 'LOC284379', 'GGCT', 'ZKSCAN7', 'ANP32A', 'C1ORF21', 'EXOSC2', 'TMEM45B', 'PSPC1', 'SAMD12', 'SLAIN1', 'VENTXP1', 'CCDC18', 'LIPC', 'CLDN4', 'CT62', 'AFF4', 'CACTIN', 'WDR54', 'NEURL1', 'IGSF3', 'CSTB', 'OXA1L', 'RNF217', 'STRN', 'MMP3', 'ZSWIM8', 'CGREF1', 'PCOLCE', 'BIRC6', 'RPE', 'VSTM4', 'CLLU1', 'GEMIN2', 'POT1', 'NUDT5', 'DHRS11', 'CDK11B', 'LIN28A', 'CCDC64B', 'ERP29', 'KRTCAP2', 'LONRF3', 'GLT1D1', 'SH3GLB2', 'NGF', 'SPTLC2', 'CARD16', 'SNORA11B', 'ZFHX4-AS1', 'SORBS2', 'TMEM203', 'GCFC2', 'MTIF3', 'HIGD1B', 'ZNF639', 'ZNHIT6', 'NCOA5', 'SPDYE5', 'NR2E3', 'CTAG1B', 'SLC9A7', 'ZDHHC22', 'RIMKLB', 'OR10X1', 'TIMMDC1', 'ASTL', 'RSPH6A', 'RARS2', 'EVA1C', 'TPM3P9', 'RAB31', 'NCOA6', 'MAEA', 'KIAA1024', 'POLD4', 'FBXO25', 'C10ORF11', 'SEC22A', 'MUSK', 'PPM1D', 'C3ORF14', 'ABHD17A', 'DUSP3', 'GPLD1', 'HYOU1', 'ZSCAN16', 'EMX2', 'OR7G2', 'C10ORF62', 'AUP1', 'NFATC2', 'STON2', 'REST', 'ESF1', 'AXIN2', 'EPOR', 'CHMP5', 'WISP2', 'TFPI2', 'PRB4', 'RBFA', 'TBR1', 'TIA1', 'ZNF816', 'CELF6', 'SHANK1', 'HSP90AA1', 'ABCC5', 'SBF1P1', 'LUZP4', 'ARID5B', 'ISG20L2', 'EIF4B', 'CRYL1', 'PRAMEF4', 'TBC1D10B', 'HECTD1', 'MED29', 'OR4K14', 'SLC3A2', 'ZNF480', 'SPANXN4', 'XRRA1', 'TROAP', 'MEX3A', 'IL1RN', 'ANKLE1', 'C3ORF33', 'DAP', 'CD84', 'SV2C', 'HOMEZ', 'DOC2B', 'EDEM1', 'ID2', 'GGTLC1', 'GPR176', 'TPD52L3', 'DDO', 'LOC441204', 'CHERP', 'MRPL3', 'CLEC17A', 'LY6H', 'ID1', 'INTS4', 'FAM90A7P', 'FASTKD2', 'LSMEM2', 'LOC284632', 'SLC17A1', 'SYNPO', 'AUTS2', 'TMEM19', 'ZMIZ1-AS1', 'FBXO10', 'EPB42', 'C10ORF55', 'CD44', 'MBNL3', 'ACER1', 'PRR23C', 'TM4SF19', 'HMX1', 'RPS10P7', 'PEX14', 'RINT1', 'CDX4', 'ZDHHC4', 'NCOA1', 'LMCD1', 'OR7C1', 'H1F0', 'ACSL5', 'APOE', 'TMEFF2', 'LOC100272216', 'TEX26', 'ZFHX3', 'HSPD1', 'EFCAB5', 'ATXN7L1', 'AKAP1', 'RAD1', 'DYRK1B', 'SIGLEC11', 'GPAM', 'CCL27', 'ZCCHC9', 'HOXA3', 'CCDC159', 'ALMS1', 'DNAJB9', 'TBL1Y', 'TBC1D2', 'DGKZ', 'SREK1IP1', 'NFYC', 'COPS7A', 'LYPLAL1', 'SCN5A', 'TMLHE', 'FAM127A', 'RBBP7', 'CDH11', 'POLH', 'CDC42SE2', 'PTPN3', 'MARVELD2', 'LRMP', 'ABTB1', 'RPS15A', 'OGFR', 'POLK', 'RIOK2', 'BLOC1S3', 'GKN1', 'NECAB2', 'CCDC169', 'ZNF532', 'TUBB4A', 'VTI1B', 'PNKD', 'TRIM37', 'RPL9', 'NKAIN4', 'PRMT5', 'SCN4A', 'OR11H6', 'ADAT1', 'BDP1', 'PRKG2', 'ACVR2B-AS1', 'SIGLEC1', 'ZNF430', 'OR8G2', 'PLOD3', 'HIPK2', 'CHMP2B', 'MATN1', 'COA1', 'CGN', 'CSNK1A1P1', 'H2AFY', 'TDRD9', 'ENOX1', 'PLCB2', 'PPIL6', 'IGF2BP2', 'ZNF699', 'HMGN3', 'UBXN2A', 'PCBP3', 'CRYGS', 'MPND', 'IFNA16', 'C9ORF72', 'ANP32AP1', 'LFNG', 'SERPINA11', 'NEU3', 'RBAK', 'TECTB', 'PPP1R12A', 'PATE2', 'PPP1R7', 'SEMA6C', 'SLC27A1', 'C19ORF60', 'CCL20', 'PM20D1', 'TRIM64', 'ZNF703', 'CYP4F3', 'LRRIQ1', 'SCARNA23', 'RTN4RL2', 'ATP8A1', 'ZDHHC17', 'ZNF595', 'TSEN15', 'EPPK1', 'CRIPAK', 'ZNF709', 'IST1', 'MET', 'LBR', 'UBE2L6', 'BCL2L11', 'SMIM10L2B', 'GPIHBP1', 'ZDHHC13', 'SLC12A9', 'GPR39', 'PGBD5', 'CLIP2', 'ZNF266', 'TBC1D3B', 'DUT', 'NINL', 'GDI2', 'PMS2', 'ST6GALNAC3', 'CCDC181', 'CEP76', 'USP30', 'LUZP2', 'B3GALT5', 'MICALCL', 'NNAT', 'GPR55', 'FAM222B', 'SKP2', 'ZNF350', 'PCSK1N', 'RPL10L', 'ASB7', 'CRB1', 'ACOXL', 'MPHOSPH9', 'TNFSF10', 'SIPA1L1', 'LCE1D', 'TRPC2', 'UCN3', 'ZNF354B', 'TTLL8', 'FAM72A', 'STH', 'SPEN', 'GABRB3', 'NLGN4Y', 'TBX5', 'OR6K6', 'AFAP1', 'BCL2A1', 'ZNF664', 'MMRN1', 'OR4D5', 'PIGR', 'ZAR1L', 'PCBP1', 'GAGE4', 'B4GALT3', 'SNORA11', 'MGAM2', 'C8ORF31', 'DNAJC18', 'PLEKHA8', 'LOC100130331', 'MAN1C1', 'UTP3', 'TRIM51', 'CD93', 'GPD1', 'LOC643923', 'ZNF461', 'KDSR', 'PPOX', 'RALGPS1', 'N4BP1', 'ZNF341', 'STYX', 'TNC', 'SLC1A5', 'BCL2L1', 'PIP', 'RCCD1', 'AADACL4', 'TAS2R39', 'C19ORF66', 'COQ10A', 'PTAFR', 'DUSP4', 'PRR7', 'PEBP1', 'OR11L1', 'OR9I1', 'ERG', 'FOXB2', 'CNP', 'ITGB7', 'NKAPL', 'SOHLH2', 'LARS', 'STAC', 'RPL3L', 'ATP6V1G3', 'TCAIM', 'ZNF442', 'NOP16', 'OR11H12', 'DNHD1', 'NOTCH4', 'SSX5', 'ZNF543', 'ZNF440', 'AAAS', 'KRTAP5-6', 'HMP19', 'SNORA58', 'MGAT5', 'CREG2', 'LCMT2', 'PRPF8', 'SYCE1L', 'GPR89B', 'UNQ6494', 'WDFY3-AS2', 'COL24A1', 'CIAO1', 'DEFB108B', 'AKAP10', 'ARHGAP28', 'SLC17A8', 'CPE', 'KIAA1551', 'ZNF705D', 'ABCA17P', 'RHBG', 'MVP', 'CRX', 'ABHD1', 'KRTAP2-2', 'TMEM236', 'LAMP2', 'SPATA4', 'SYCP3', 'SEPT14', 'PPIF', 'GTF3C4', 'TSC22D2', 'MOB3B', 'WDR18', 'BAZ2A', 'C9ORF106', 'ZNF160', 'UBN2', 'KLHL3', 'GLRA1', 'OR9K2', 'SCN1A', 'ZNF670', 'PSMB5', 'MMP23B', 'SPECC1', 'ZNF679', 'TRIM74', 'ASAH2B', 'ASCC2', 'C20ORF202', 'ANKRD20A20P', 'FLT3', 'MLANA', 'TRIM71', 'TBRG4', 'MKI67', 'SUMF1', 'BACE1', 'SHD', 'C22ORF29', 'ZMYM6', 'LTC4S', 'SPATA5L1', 'PEX12', 'TRIO', 'PTTG2', 'C9ORF129', 'RDH11', 'FAM26F', 'DAW1', 'WNT3A', 'OPALIN', 'GCC2', 'ADAMTSL2', 'ALCAM', 'CGA', 'EIF4A2', 'C3ORF52', 'SCTR', 'ZNF540', 'MRPL35', 'SPATA24', 'HINT2', 'C4BPB', 'GBP4', 'SKP1', 'LOC100128239', 'MYO3B', 'SMCO2', 'FH', 'MMP10', 'CSHL1', 'SNN', 'B3GAT2', 'FXYD4', 'SMPDL3A', 'C1ORF198', 'ACVR1', 'MNS1', 'SDHAF2', 'FAM65C', 'STOX1', 'DCTN4', 'C1ORF68', 'OR11H4', 'SLC35F2', 'OR52A1', 'GOLGA6C', 'NUP210', 'APTX', 'GPC3', 'ASTN2', 'TRIM35', 'MIR17HG', 'TAC4', 'DBN1', 'PLEKHJ1', 'VWCE', 'APC', 'USE1', 'TSPO2', 'MUSTN1', 'EFEMP2', 'ERF', 'UBE2D3', 'TPT1', 'CCM2', 'RNF182', 'C14ORF39', 'SNORA45B', 'AIDA', 'EDC4', 'TTC28-AS1', 'CAPN14', 'PRRX2', 'PTPN9', 'TBPL1', 'MROH6', 'EIF4EBP1', 'XPO4', 'RPL8', 'LCE2B', 'AMIGO2', 'EID3', 'PIP5K1C', 'RPL32P3', 'NFAT5', 'SSUH2', 'ERBB2', 'RRBP1', 'ZNF335', 'SNX11', 'H2BFXP', 'RAB24', 'NR1H2', 'SHC4', 'LOC606724', 'FZD9', 'CWC27', 'CSMD2', 'STPG1', 'GLIS3', 'ETV4', 'LINC00626', 'SVEP1', 'DPH2', 'CDX1', 'PDZD7', 'FBXO47', 'CATSPER2', 'ASPHD2', 'TUBAL3', 'ZNF772', 'MSX2P1', 'VCAM1', 'RAB4A', 'NGLY1', 'LINC01098', 'OR51F2', 'ADCY10', 'AKR7A3', 'MVB12A', 'AKIP1', 'APEX2', 'KCNJ2', 'SGPP2', 'GORASP2', 'INPP5E', 'TMEM254', 'LCE3A', 'COL10A1', 'ELP6', 'TMEM189-UBE2V1', 'OTC', 'ESPNL', 'STAG3L3', 'TXNRD2', 'SECTM1', 'PLXDC1', 'ITGAM', 'VPREB1', 'CHP1', 'LINC01555', 'VWA2', 'OR10A3', 'C1QTNF1', 'FGF21', 'CD300E', 'REG1B', 'NR6A1', 'C2ORF16', 'FAM46A', 'KIF1C', 'POM121C', 'NSUN5', 'UGT1A1', 'SNORD116-19', 'FAM50B', 'LOC154449', 'AMOTL1', 'PUS7', 'STX5', 'CORO2A', 'TBRG1', 'TBXA2R', 'MAF', 'BPIFC', 'OXER1', 'TOX4', 'CEP70', 'CNKSR3', 'FAM183B', 'RUNDC1', 'KIAA1468', 'OLFML3', 'CEP83-AS1', 'SGCD', 'LAMB2P1', 'RBM48', 'CTNNAL1', 'TRIM55', 'PTTG1', 'MMP23A', 'ART3', 'USP53', 'LIN52', 'MT1B', 'FGF9', 'EXO1', 'SETBP1', 'ADAMTS14', 'IFT52', 'POLR3G', 'SERPINE1', 'OR1A2', 'OSER1', 'ADAM29', 'C16ORF96', 'ELFN2', 'PRR21', 'DZANK1', 'EXOC3', 'CBLL1', 'C11ORF73', 'PMS2P2', 'GABARAPL2', 'GOSR1', 'LRFN4', 'SPATA3', 'PLSCR3', 'KRTAP12-3', 'OR6X1', 'AFP', 'ARRB1', 'ZMYND11', 'LINC01312', 'PACRG-AS1', 'FAM206A', 'PPIAL4D', 'NOL3', 'STK35', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 9.89092244809779e-16 NRMSE: 6.3191899209681645e-16 MAPE: 5.394897395813312e-12 Pearson Correlation: 0.2082749245712828 Spearman Correlation: 0.2094814149802367 Coefficient of Determination: -2.2646415118426937 RMSE: 0.4137678496432159 NRMSE: 0.26095348741373353 MAPE: 1391.4709427305008 Predictor: ElasticNet Pearson Correlation: 0.6813578228593107 Spearman Correlation: 0.6719648443600178 Coefficient of Determination: 0.40992882298836875 RMSE: 0.1845945621443828 NRMSE: 0.11793521814465877 MAPE: 411.18752175822266 Pearson Correlation: 0.5045285209821633 Spearman Correlation: 0.3919275801443909 Coefficient of Determination: 0.22702328613762712 RMSE: 0.20133635341887923 NRMSE: 0.1269780230946514 MAPE: 400.2434953198191 Predictor: RandomForests Pearson Correlation: 0.5792641171259173 Spearman Correlation: 0.5450393780943212 Coefficient of Determination: 0.26836572277669835 RMSE: 0.2055482220796345 NRMSE: 0.131322256347117 MAPE: 476.26095443410287 Pearson Correlation: 0.4855254346265723 Spearman Correlation: 0.42566864923502795 Coefficient of Determination: 0.20186934564464132 RMSE: 0.20458603649267962 NRMSE: 0.12902752049235597 MAPE: 493.3254471447986 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['TCEB3C', 'TP53AIP1', 'CLEC3B', 'TMEM2', 'PABPC1P2', 'WDR12', 'SRR', 'KHNYN', 'TMEM209', 'SCEL', 'SERPINA9', 'DHX9', 'ATP2B4', 'OPN5', 'CCL13', 'VAMP7', 'UBAP2', 'TAF6L', 'ADAM21', 'TYMS', 'HDAC5', 'SLC6A19', 'GRSF1', 'TAF2', 'AWAT1', 'CCNB3', 'CWF19L2', 'RNU4ATAC', 'BRAT1', 'ZNF485', 'EDA', 'SCP2', 'LINC01341', 'SBK1', 'UNC5C', 'OR6N1', 'POLD2', 'ID1', 'LRRC66', 'RENBP', 'PIGY', 'IPO8', 'USF1', 'GRIN1', 'C12ORF49', 'NUSAP1', 'PABPC1L2A', 'FAM135A', 'VAMP5', 'COMMD8', 'USP4', 'HTATIP2', 'MRPL52', 'ZRANB1', 'EIF3E', 'PTPN4', 'SLCO3A1', 'RPL19P12', 'UNC79', 'ANKRD36BP1', 'ANGPT2', 'MED25', 'GPR160', 'CACNA1C', 'HSF5', 'DACH2', 'CDKN1C', 'TXNDC11', 'PHF10', 'MYDGF', 'TMEM186', 'URM1', 'SNAP91', 'SLC43A2', 'NUGGC', 'ATP6V0B', 'PRDM5', 'CENPC', 'MORN4', 'INTS8', 'COL15A1', 'SPAM1', 'MFSD3', 'PTAR1', 'ZNF800', 'CD4', 'HIPK4', 'MCF2L', 'DIMT1', 'ZNF207', 'PTGFRN', 'FAM163B', 'SERINC2', 'CASC2', 'KRT33B', 'THEM4', 'C3ORF38', 'MYH14', 'P2RX7', 'COL4A5', 'LRRC4', 'LILRA6', 'ZNF75D', 'SOD2', 'FAM99A', 'KATNA1', 'CLEC10A', 'RCE1', 'ADAL', 'UBE2D4', 'LDOC1', 'ZDHHC9', 'GTPBP10', 'RNF8', 'AAAS', 'POLR3G', 'SELK', 'C9ORF3', 'KLHL8', 'TAF1D', 'RRP15', 'LAS1L', 'ABCF3', 'SF1', 'NPB', 'OR9Q1', 'PRPS1L1', 'FOXL1', 'DDI2', 'FBXO6', 'NMBR', 'AASDHPPT', 'FRY', 'IFI30', 'CNPY3', 'PRR4', 'TSEN2', 'HOXB1', 'CKAP2L', 'NLGN2', 'CCDC77', 'MCF2', 'YIPF3', 'PRR23B', 'CPEB3', 'ANXA2', 'GPR27', 'PMS2P4', 'PRKAR2B', 'POTEE', 'PAGR1', 'CYB5RL', 'ABHD11-AS1', 'ZBTB2', 'CCL1', 'PCLO', 'RPL22L1', 'SPHK2', 'PRPF38B', 'ZNF846', 'OR6C4', 'NXPE4', 'LINC01138', 'LY86', 'MKX', 'CTSD', 'CRYBB2', 'DKFZP434L192', 'RELL1', 'CENPBD1', 'PLLP', 'DCAF8L2', 'PHF13', 'INSIG1', 'MIEN1', 'PPFIA2', 'SLC39A9', 'CDK5', 'METTL25', 'CBX1', 'HIST1H3C', 'FAM72B', 'RALGPS1', 'CABLES1', 'FANCF', 'TTC8', 'ADRBK1', 'TKTL1', 'TCN1', 'GNG5', 'ZNF91', 'DDIAS', 'LINC00442', 'NEURL1', 'UQCC3', 'NLRX1', 'XPO1', 'LINC00238', 'ADAM20', 'RASSF6', 'TRIO', 'SLIRP', 'BRI3BP', 'CDCA3', 'PP2D1', 'TRAPPC11', 'IFNA16', 'RHOXF1', 'NAP1L2', 'C20ORF202', 'LMNTD1', 'TIMM10B', 'ELFN2', 'LOC145845', 'UBE2W', 'WWC3', 'FASN', 'CCDC62', 'UBA7', 'NBEAL1', 'PROM1', 'POLD3', 'BAIAP3', 'TEAD4', 'SERPING1', 'DCLK2', 'LOC146880', 'VBP1', 'TNFSF14', 'ATL2', 'TACC3', 'OR51T1', 'NR2F1', 'FAM179B', 'LINC01001', 'DDX11L2', 'ZNF878', 'STAT4', 'PIN1P1', 'C10ORF91', 'RPL22', 'DDB1', 'KLHL17', 'ACSM4', 'SKOR1', 'LMO3', 'MYO1D', 'B4GALT3', 'PLS3', 'FAM181A', 'MTMR11', 'CYP3A4', 'KANSL1', 'KAZALD1', 'PLP2', 'TXLNB', 'METTL21C', 'HYPK', 'CA5B', 'CBWD1', 'GAS2', 'TUBA4B', 'WIPF1', 'RAD52', 'FBP1', 'NOP9', 'SOWAHD', 'LAG3', 'SPAG11B', 'OR1J1', 'RAB21', 'INE1', 'CT62', 'HOOK2', 'CCDC7', 'ZNF771', 'IDUA', 'DDX59', 'NHLRC4', 'TCEAL4', 'CCNE1', 'MMP10', 'NUP205', 'THOP1', 'KIAA1211L', 'OR51E1', 'RPE', 'RAB11A', 'TMEM69', 'TMEM126B', 'PIAS1', 'LINC00426', 'CELF3', 'SH3BGRL2', 'NOD1', 'CTU1', 'ATP8A1', 'FUT7', 'RPL26L1', 'NCK1', 'GNGT2', 'SLC38A10', 'EIF3B', 'YBX2', 'COX7C', 'TRIP10', 'BEND5', 'UGT1A3', 'LACC1', 'FABP3', 'ERICH5', 'NPM2', 'VPS8', 'PSMA1', 'DEFB119', 'SLC25A41', 'NBPF7', 'STRN', 'PGA3', 'PPP2R5A', 'GOLGA2P3Y', 'DUOX2', 'PRSS33', 'ABHD4', 'PLCH1', 'RAB9B', 'CKS2', 'CDKL4', 'GBX1', 'PDCD5', 'FAM86JP', 'NPVF', 'RIN3', 'LGALS9B', 'NCAPG2', 'RASIP1', 'RRBP1', 'KRTAP15-1', 'DMBT1P1', 'SMS', 'LOC341056', 'GCG', 'TGFBRAP1', 'CDK3', 'PLAC1', 'TAF5L', 'SNORD116-4', 'HSD17B2', 'OR4M1', 'SPATA22', 'TMEM168', 'BOP1', 'ATP13A4', 'GABARAPL2', 'PASD1', 'FETUB', 'CRHBP', 'ALX3', 'KLRAP1', 'IL12B', 'PRLR', 'TPM2', 'RHOD', 'HNRNPU-AS1', 'MAST3', 'TAF9B', 'SYF2', 'TAS2R3', 'DRG1', 'WDR7', 'YPEL2', 'SNRPGP15', 'MATN2', 'TIGAR', 'MAPK9', 'FBXO39', 'GJD4', 'RBBP5', 'FUK', 'AOX2P', 'C11ORF24', 'ALDH1L1', 'AIPL1', 'SOX7', 'PRO0628', 'ISG20', 'DUSP27', 'SLC38A1', 'ZNF354A', 'PHLDA3', 'EGFL7', 'TUBA3FP', 'SH3D21', 'ANKAR', 'CEP76', 'MRPL48', 'TTC27', 'RPL32P3', 'BCDIN3D-AS1', 'GINS4', 'SAMD11', 'RALGAPA2', 'GNAI2', 'PIK3AP1', 'KDR', 'SPTLC1', 'LRRC43', 'ZNF655', 'SLC25A38', 'POLR2F', 'ATPIF1', 'WBSCR22', 'UNK', 'GPR89B', 'CCNI2', 'KLHDC8B', 'CTAGE4', 'ELAVL1', 'LDHD', 'C8ORF4', 'GGT5', 'LCE1C', 'WSCD1', 'CHMP2A', 'LINC00632', 'LDLRAD2', 'UCN2', 'SHMT1', 'LRRC55', 'CYP8B1', 'EHD4', 'MAP4K1', 'TMCO6', 'NUBP1', 'SESN3', 'OPRL1', 'NAA10', 'ACRV1', 'AADAC', 'LRP11', 'H6PD', 'WDFY1', 'ZNF71', 'NUP43', 'PCTP', 'HNRNPK', 'ADGRA2', 'FAM156A', 'HEY2', 'HIST1H1C', 'DNAJB8', 'EML4', 'MROH2B', 'LOC645166', 'DCANP1', 'CLEC1B', 'AQP9', 'KCTD17', 'ARHGDIG', 'B4GALNT1', 'SLC37A4', 'GNAZ', 'PROKR1', 'PCDH9', 'SS18L1', 'OXNAD1', 'AGAP2-AS1', 'RSPH4A', 'SHCBP1', 'ALLC', 'KRT20', 'STX11', 'GSTZ1', 'MED19', 'VAT1L', 'LINC00620', 'HIRA', 'SUCLG1', 'OR10X1', 'PAN3', 'GNG4', 'DBP', 'BRF1', 'PADI4', 'DLX5', 'ACTL7A', 'SNORA65', 'TTYH2', 'LOH12CR2', 'HLA-DQB2', 'FAM21A', 'SLC16A1', 'APOBEC4', 'RNF115', 'PHGDH', 'LOC391322', 'ZNF614', 'PIGW', 'AMN', 'P2RX1', 'LARP1', 'C7ORF62', 'HRAS', 'CDK15', 'TAS2R46', 'MSMB', 'LOC606724', 'MIR4697HG', 'ZNF772', 'OR56A4', 'CLEC4M', 'SPINK2', 'PPP1R16B', 'MTNR1A', 'VIL1', 'CAND2', 'SH2B1', 'SELE', 'C20ORF27', 'ZNF117', 'OR5C1', 'DHFR', 'CACFD1', 'CNKSR2', 'NXF5', 'PSMD5-AS1', 'NRN1L', 'TMPRSS4', 'C3ORF35', 'HMX2', 'WDR3', 'SLC39A1', 'SEZ6', 'XIAP', 'ZYX', 'SST', 'CLEC17A', 'C8ORF82', 'DOLK', 'SNED1', 'GOLGA8F', 'C1RL', 'NODAL', 'PRB1', 'FGF13', 'SPNS1', 'TATDN2', 'MAP2K3', 'OMG', 'FOXJ2', 'ZFPL1', 'LMNTD2', 'TNFRSF1B', 'STRADA', 'UCKL1-AS1', 'NAPEPLD', 'ZNF703', 'B9D1', 'LCA5L', 'ZNF570', 'PNLIP', 'MIA2', 'SERAC1', 'OTUD6B', 'SRP72', 'WBSCR16', 'CRBN', 'ANKEF1', 'PIANP', 'TIMM17B', 'QPRT', 'HOPX', 'CDHR4', 'TUBGCP2', 'DDX49', 'ZNF304', 'PAFAH1B1', 'PKIB', 'ANKRD31', 'C12ORF29', 'C6ORF48', 'RNASE12', 'EFCAB12', 'BAG4', 'PPP5C', 'ST6GAL1', 'CHID1', 'ZNF484', 'RPH3A', 'NDUFS7', 'NAA25', 'LOC728323', 'SMARCAL1', 'YWHAH', 'TP53INP2', 'HMSD', 'ERLIN2', 'PIGA', 'TP53INP1', 'C14ORF166', 'CENPF', 'TMEM132B', 'MAD1L1', 'GREB1L', 'CASC3', 'MUM1L1', 'LOC653786', 'CHI3L1', 'SNCB', 'DNAJC15', 'HES7', 'EPB41L3', 'PDK4', 'COA3', 'CRYBA1', 'MAFB', 'POLB', 'MFF', 'NOB1', 'MAP1A', 'TTC28-AS1', 'VCX3B', 'KPNA5', 'DERA', 'FHL5', 'OR4D5', 'TSEN34', 'IGSF9', 'KLF11', 'PDE7A', 'POLR2J2', 'SERINC4', 'FAM127A', 'CD9', 'YES1', 'RPL3L', 'ZC3H12B', 'MEX3B', 'MYBPHL', 'PAXBP1', 'ECI1', 'LOC285696', 'ISL1', 'C1ORF52', 'LMX1B', 'SPINT3', 'LCN6', 'KCNE2', 'CRIP3', 'TNFRSF11B', 'KCNK1', 'PLAGL2', 'CAMK1D', 'COQ10B', 'AIRE', 'PRIMA1', 'DTNBP1', 'GSC2', 'MVB12B', 'VPS13B', 'TM4SF4', 'CHODL', 'MTERF1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.3437386642511348e-15 NRMSE: 5.696609135477341e-16 MAPE: 3.3669939517063854e-12 Pearson Correlation: 0.37854675388231357 Spearman Correlation: 0.243235256344104 Coefficient of Determination: -1.894801864990833 RMSE: 1.7637957605930181 NRMSE: 0.31760646821641125 MAPE: 666.2053160370174 Predictor: ElasticNet Pearson Correlation: 0.9374814697712779 Spearman Correlation: 0.8631789807172774 Coefficient of Determination: 0.8707805707467751 RMSE: 0.35257817345116915 NRMSE: 0.060067494667729045 MAPE: 349.12770442973755 Pearson Correlation: 0.7959391168405713 Spearman Correlation: 0.5660850709926856 Coefficient of Determination: 0.6233349803470422 RMSE: 0.6362334778272475 NRMSE: 0.11456647780229184 MAPE: 288.9029165395017 Predictor: RandomForests Pearson Correlation: 0.8551658751234906 Spearman Correlation: 0.671352063098044 Coefficient of Determination: 0.7268260412488197 RMSE: 0.5126384329382165 NRMSE: 0.08733639418338528 MAPE: 431.02289972186793 Pearson Correlation: 0.7833004053186203 Spearman Correlation: 0.6828385996386179 Coefficient of Determination: 0.5686330057450988 RMSE: 0.6808670677493726 NRMSE: 0.12260364240814142 MAPE: 203.49689636771112 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['ZP2', 'RNASE7', 'KIF2B', 'VASP', 'MBD3L1', 'PCAT4', 'CXCL12', 'HOMEZ', 'TEP1', 'NIPAL3', 'C2ORF78', 'UBQLNL', 'SERINC5', 'SIGLEC10', 'C2', 'SELP', 'CD209', 'ARHGAP8', 'CYB561A3', 'ALDOA', 'NODAL', 'SMARCE1', 'EPHX2', 'TGFBR2', 'TCEB2', 'CSRNP2', 'TM6SF1', 'SERPINE3', 'ARPC4', 'CCDC66', 'HSFY1P1', 'RBM39', 'ORAI1', 'PARK7', 'EIF4EBP3', 'FAM129B', 'CPEB1', 'LOC100128239', 'TGFB3', 'SLC26A9', 'AGAP4', 'ARSK', 'C20ORF202', 'TTLL3', 'CDKN1B', 'NOP14', 'PON2', 'REG1A', 'RPE', 'CLRN3', 'PSG3', 'PDF', 'EPC2', 'SLC44A3', 'INGX', 'C1ORF52', 'FAM86C2P', 'DCHS2', 'CENPBD1P1', 'SHMT2', 'LIN37', 'ZC2HC1C', 'SERPINA7', 'CCDC91', 'MUC20', 'VGLL4', 'TPM3', 'SUCLG1', 'TSPAN7', 'KIAA1161', 'NUCB2', 'CPEB2', 'B3GAT1', 'ARHGDIA', 'ATPAF1', 'NDUFA6', 'NAPSB', 'KRT75', 'SLC23A3', 'ZNF454', 'EGFL7', 'FAM90A7P', 'GLB1L2', 'OR1G1', 'IFNW1', 'RASGEF1C', 'RAD52', 'PPID', 'CAST', 'CPEB4', 'ZNF542P', 'OPLAH', 'OR6C2', 'FAM104B', 'NFU1', 'ZNF175', 'SNORA22', 'CIDECP', 'CCDC60', 'OR6M1', 'TPP2', 'POSTN', 'NDUFB3', 'GBP1', 'NUMBL', 'SAA3P', 'MMEL1', 'ADRBK2', 'ABHD6', 'REXO1L6P', 'PAX1', 'RPL36', 'ZNF480', 'EXD3', 'RNMTL1', 'PDGFB', 'KIAA0895', 'PCDH7', 'PTPRJ', 'MYO1B', 'GPR63', 'PF4', 'NDST4', 'FTH1', 'PIGL', 'PARVG', 'BCL2L2', 'MRPL41', 'PRR15L', 'DNPH1', 'ZNF732', 'PROKR1', 'CKB', 'PSRC1', 'JMJD1C', 'REEP1', 'DHFR', 'TCIRG1', 'EML1', 'UGDH', 'SPANXN4', 'TRPV2', 'HMG20B', 'YIF1A', 'PSMD11', 'TRIM64', 'NCEH1', 'B3GALT4', 'ACTR3BP2', 'LINC00174', 'KRT33A', 'SMG1P3', 'COL6A5', 'FERMT2', 'HIST2H2BE', 'THUMPD2', 'CENPO', 'GTPBP10', 'C12ORF66', 'LINC00200', 'RABEPK', 'CATSPERG', 'SLC2A12', 'NXF4', 'OR2A1', 'PDSS2', 'GOLGA6D', 'LOC100240735', 'SNORA54', 'SDC3', 'PPP2CB', 'CELA2A', 'NLRP10', 'CADM2', 'PHF11', 'ZNF417', 'ARFRP1', 'BTN2A1', 'LYSMD2', 'ZNF775', 'KLF14', 'NEUROD2', 'ODF2', 'NTHL1', 'C2ORF50', 'GLIDR', 'SPTLC2', 'CD40', 'MRGPRX2', 'CCDC137', 'OR5H15', 'GUSBP5', 'LAMP2', 'PLCB2', 'CYP3A5', 'LINC00526', 'GTF2B', 'RPS27L', 'LOXL3', 'C12ORF49', 'GLTSCR1L', 'KYNU', 'KLHL24', 'KCNMB3', 'EIF4G1', 'LAT2', 'RAD51B', 'CXORF66', 'TCHHL1', 'CR1L', 'CSRP1', 'YBEY', 'VIMP', 'OLFM3', 'OR2C1', 'TPTE', 'SLC35D2', 'BTG4', 'LGALS7', 'PPP2R1A', 'TAGAP', 'ATP6V1D', 'SLC6A11', 'CLTA', 'ISM2', 'SNX7', 'GJA5', 'CCER1', 'LINC01600', 'TOMM6', 'SULT4A1', 'LECT2', 'PRDX1', 'SSU72', 'SAFB2', 'SNORD116-28', 'MMP16', 'ERAP2', 'SLC9B2', 'SLC25A21', 'LOC152225', 'SZT2', 'PRSS23', 'LINC00523', 'SOWAHA', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.7543369661196221 Spearman Correlation: 0.7339826731282288 Coefficient of Determination: 0.569024258454556 RMSE: 0.3136144445763201 NRMSE: 0.08575284428107921 MAPE: 184.8040085376702 Pearson Correlation: 0.2790329561307432 Spearman Correlation: 0.24889337772291428 Coefficient of Determination: -0.8971541595473373 RMSE: 0.5297109251805089 NRMSE: 0.26072685287497915 MAPE: 414.3023120621003 Predictor: ElasticNet Pearson Correlation: 0.6516125987713035 Spearman Correlation: 0.6641070520796999 Coefficient of Determination: 0.402899926376726 RMSE: 0.36914178415890503 NRMSE: 0.10093590547904403 MAPE: 192.66672778138803 Pearson Correlation: 0.3505381711189864 Spearman Correlation: 0.33894936345839727 Coefficient of Determination: 0.03493061288737698 RMSE: 0.3778042933311115 NRMSE: 0.18595750950258233 MAPE: 231.43861246914375 Predictor: RandomForests Pearson Correlation: 0.5867672701788745 Spearman Correlation: 0.5856769238590165 Coefficient of Determination: 0.3173245942799138 RMSE: 0.3947087673455734 NRMSE: 0.10792678732731234 MAPE: 228.76443519937717 Pearson Correlation: 0.4103125706293373 Spearman Correlation: 0.36061591867248155 Coefficient of Determination: 0.15735435542430476 RMSE: 0.35302877789011206 NRMSE: 0.17376285414959716 MAPE: 228.55462564521525 Fold: 5 Protein: RB1 x_train_column_count: 371 x_train columns: ['TINCR', 'OR4C15', 'TEX9', 'PCGF5', 'LINC00520', 'PEX1', 'GUSBP4', 'RAG1', 'CEACAM20', 'IGSF10', 'TMSB4XP8', 'C16ORF93', 'PKP1', 'RAD21L1', 'SMOC2', 'GINS4', 'ZBED5', 'RBAK', 'SNAR-B2', 'RGL2', 'PCDHA9', 'CAP2', 'ZPLD1', 'COLEC12', 'FAM110D', 'NIT2', 'CD209', 'HCG18', 'FCRL3', 'MAP3K19', 'TOPBP1', 'HIST1H3F', 'BMS1', 'ATAD2B', 'AREG', 'PIN4', 'SLC26A10', 'ENC1', 'DSN1', 'LRRC17', 'TEX36-AS1', 'ALX3', 'TTK', 'PELI3', 'TPTE2P3', 'GOLGA6L1', 'AGTR1', 'CBLL1', 'CDS1', 'CDK14', 'C16ORF70', 'CTAGE4', 'MARVELD2', 'ZRANB2', 'SF3A3', 'ERG', 'CTSG', 'NR4A3', 'KCNJ16', 'SUPT20HL1', 'POU2F2', 'OXTR', 'A4GNT', 'CCDC91', 'PEMT', 'DNAAF5', 'BLID', 'MTUS2', 'NDP', 'ASCL2', 'C1R', 'DSEL', 'RAB40AL', 'BHLHE40', 'VTI1A', 'GGH', 'TCEA1', 'GRIK1-AS1', 'IGF2BP1', 'SERBP1', 'INTS12', 'SNRPB', 'FAM178A', 'COL15A1', 'AMPD1', 'PAK6', 'NPW', 'ZNF676', 'SYNE2', 'IL17D', 'AXIN1', 'NCAPD3', 'POLD3', 'ARHGEF7', 'CCDC39', 'OR9Q2', 'PDP1', 'ULK3', 'IZUMO4', 'CLIP4', 'SOX21', 'KDM6A', 'DNMT3L', 'FXYD6', 'ZC3H12B', 'TM7SF3', 'ASTE1', 'ARFIP2', 'TMEM79', 'QSER1', 'SRXN1', 'PES1', 'TMEM45B', 'RSPH10B2', 'TENM4', 'DHCR7', 'SLC5A9', 'CDC6', 'TAT', 'CHST3', 'EXOSC1', 'SDHAF4', 'PLCE1', 'GKN1', 'HOXB2', 'KRTAP10-11', 'THOC5', 'ERBB2', 'PIFO', 'FRMD3', 'SEMA6C', 'DNAJC5B', 'TRPC5', 'TFAP2C', 'FAM120A', 'PITPNB', 'SLC4A5', 'CCPG1', 'FAM72B', 'RABGAP1L', 'NDUFAF7', 'ABCG2', 'KLRC2', 'ADAMTSL2', 'MORN2', 'PCDHGA11', 'DNAJC18', 'LOC154449', 'IFNE', 'TMEM27', 'SDHAF2', 'TOB2', 'CEP76', 'CFAP221', 'LY6G5C', 'MED25', 'FAM138F', 'NUTM1', 'RGS19', 'SHARPIN', 'RGS2', 'TEX10', 'KLF14', 'ADAMTS16', 'TRIB3', 'CMTR1', 'RPS27L', 'FAM90A1', 'GMEB2', 'PFN2', 'NBR2', 'CCNC', 'ACSM6', 'ARRDC2', 'CFC1B', 'DDX46', 'ADAM28', 'DRG1', 'DDX1', 'YWHAE', 'LRRCC1', 'LSG1', 'PNPT1', 'CRKL', 'B3GALNT2', 'BAIAP2-AS1', 'CDH23', 'COLEC10', 'FBL', 'ADGRF3', 'USP5', 'CEACAM22P', 'NME6', 'BEST2', 'IGFBP3', 'LAMA5', 'ILF3', 'ZNF319', 'CDHR1', 'TXLNB', 'AGAP5', 'DDX20', 'ZCCHC10', 'ACOX2', 'CES3', 'PLA2G2C', 'C10ORF128', 'MYL7', 'PDCD6', 'TNIK', 'LOC286359', 'CCDC168', 'EPM2AIP1', 'STXBP5L', 'HDLBP', 'ABCG1', 'PLXNB3', 'GPR89A', 'DPY19L2P4', 'DUSP12', 'LOC654342', 'ZNF384', 'HIST1H2AE', 'TMEM200B', 'PIK3IP1', 'APOA4', 'GPR4', 'POLR3E', 'NAT8', 'GANC', 'ADIG', 'PREPL', 'RPS3A', 'MORC4', 'PLP2', 'OR2AG2', 'OR5B12', 'LCNL1', 'S1PR3', 'BPIFC', 'BPHL', 'CEP290', 'ANKRD34B', 'ZNF320', 'CASP2', 'SMR3B', 'NLRP3', 'CXADRP2', 'KRT14', 'UBN2', 'EIF3J', 'TBC1D2B', 'KLRC1', 'PDSS2', 'NBPF10', 'LGI3', 'GTF2E1', 'LINC00479', 'MYNN', 'ID2B', 'NUP214', 'C9ORF69', 'USP22', 'FAM65C', 'QRFP', 'WWTR1', 'TRAF3', 'RIMS1', 'CALCB', 'STK19', 'ARL9', 'FBLL1', 'DSG3', 'LONRF3', 'HEATR5B', 'MIPEP', 'SFXN5', 'TIAL1', 'LCE6A', 'MOV10', 'FUT2', 'LYL1', 'SOWAHA', 'ZNF583', 'SCARNA8', 'SHC1', 'SH2D1A', 'UQCR11', 'ROPN1L', 'ADCY10', 'CERS5', 'PAPSS1', 'ZNF81', 'SLC44A1', 'MRPL23', 'CAMK2B', 'LYPD6', 'HHIPL1', 'ADGRG2', 'PSORS1C2', 'XAGE3', 'SEPT7P9', 'AQP1', 'PRR35', 'CAPNS1', 'PCDH18', 'ANKRD34C', 'CRHR1-IT1', 'UGT8', 'TRMT112', 'PDIA2', 'ABCA5', 'MED29', 'HTRA2', 'PLOD1', 'KRBA2', 'TRAF3IP3', 'PDIA3', 'LOC283332', 'STATH', 'EFHC2', 'PIGX', 'C17ORF78', 'IFITM1', 'APOM', 'PRSS38', 'DUS3L', 'ZNF469', 'P2RX3', 'KDR', 'ST8SIA6', 'HOXA2', 'PTBP3', 'C2ORF88', 'SPAG17', 'ABCC4', 'ATP13A4', 'PSMD11', 'TMEM63C', 'TMED8', 'ARMC2', 'TNFRSF14', 'METTL4', 'KCNV2', 'XRCC5', 'GTPBP8', 'GFOD2', 'ARPP19', 'OR4F29', 'ANKRD2', 'RER1', 'TXLNG', 'C11ORF58', 'TTC17', 'CCDC94', 'SNORA21', 'HIST1H2BC', 'RPS12', 'ABCC5', 'KRTAP24-1', 'ECEL1', 'FAM122C', 'NAP1L2', 'ERAP1', 'RAB31', 'TUBB6', 'QSOX1', 'RPS2', 'ZNF593', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.8072269574921241 Spearman Correlation: 0.723076627873146 Coefficient of Determination: 0.6516153609019917 RMSE: 0.13806039855096833 NRMSE: 0.0682039089189313 MAPE: 270.35322331124536 Pearson Correlation: 0.15703230213886524 Spearman Correlation: 0.13368994625868152 Coefficient of Determination: -8.619256814906084 RMSE: 0.7455042877940261 NRMSE: 0.3758870418258406 MAPE: 1307.7902704226742 Predictor: ElasticNet Pearson Correlation: 0.5272279672457215 Spearman Correlation: 0.4551973154642732 Coefficient of Determination: 0.24769755080050704 RMSE: 0.20287842359304784 NRMSE: 0.10022498609004303 MAPE: 174.0604789577516 Pearson Correlation: 0.13625807796735934 Spearman Correlation: 0.20539657601715733 Coefficient of Determination: -0.10230813574978481 RMSE: 0.2523660278982322 NRMSE: 0.12724423083427394 MAPE: 425.6857967531668 Predictor: RandomForests Pearson Correlation: 0.5873866251104243 Spearman Correlation: 0.4807483957052762 Coefficient of Determination: 0.2036647921200787 RMSE: 0.20873130217485547 NRMSE: 0.10311639595048756 MAPE: 139.21232581404018 Pearson Correlation: 0.23815103338124563 Spearman Correlation: 0.159291262983329 Coefficient of Determination: -0.0617310262503854 RMSE: 0.24767754834855546 NRMSE: 0.12488027567339384 MAPE: 203.39808786319082 Protein: CDH1 x_train_column_count: 836 x_train columns: ['RASD2', 'SAMD15', 'NDP', 'SNX29', 'ERCC6', 'GOLGA2', 'TBC1D22B', 'SAXO2', 'PARP4', 'RUNX3', 'ASF1B', 'VSTM1', 'PAG1', 'TBX10', 'MAD1L1', 'SHC1', 'OMG', 'CDH2', 'CASP10', 'ATP6V1E1', 'TAF1B', 'SYNGAP1', 'CREB3', 'SEC1P', 'GLIPR1L2', 'DSCR10', 'MRPL34', 'TMEM132D', 'SARAF', 'NAA15', 'SERPINB11', 'IGFL2', 'CTNNA3', 'ZNF716', 'NUP35', 'AARS', 'ADGRG1', 'C8ORF37', 'OR7C2', 'NHEJ1', 'SLC30A10', 'SLC26A11', 'SF3A2', 'PRAMEF2', 'LHX9', 'SIGLEC9', 'CHML', 'CFHR1', 'MIF', 'TWISTNB', 'CST13P', 'NTMT1', 'NUDT6', 'PSMD7', 'ZNF354A', 'CROCCP3', 'TMEM215', 'GMPPA', 'RAB34', 'RAD52', 'NXN', 'RNF125', 'RHOBTB1', 'CDPF1', 'CSF3', 'DYX1C1', 'PBX3', 'HIST1H2AC', 'OTOR', 'SERPINB12', 'MRPL54', 'GALNT1', 'SIKE1', 'CFAP221', 'FAM177B', 'GALNTL5', 'RPS20', 'CCT8', 'HILS1', 'FILIP1', 'LOC729609', 'FLJ23867', 'ZNF552', 'PALM', 'UGT2B10', 'STEAP1B', 'STK35', 'KCNT1', 'OR4N2', 'ARPC5L', 'IRF4', 'PCDHGA12', 'MYH8', 'AQP12B', 'C9', 'ATP8B2', 'EDA', 'METRNL', 'NRM', 'RASL11B', 'DDX51', 'RABIF', 'BTG4', 'DNAH1', 'SLMO1', 'RPL18A', 'RNF182', 'TTC22', 'RNFT2', 'FBXW10', 'FBXO22-AS1', 'DEFB135', 'ANAPC15', 'SYT16', 'NKG7', 'CRADD', 'ITGAM', 'CCDC30', 'METTL17', 'UMPS', 'GLTSCR1', 'GNPDA1', 'RNH1', 'MEG3', 'MADCAM1', 'APOM', 'SSUH2', 'SH3BP2', 'GAPDHS', 'PPP1R7', 'STPG2', 'CNKSR3', 'GLMN', 'TRIM8', 'ZFP36', 'RPEL1', 'PRPF19', 'RFX2', 'QRFP', 'ADIRF', 'ANKRD36BP2', 'AKIRIN2', 'KDELR3', 'TMEM56', 'TMPRSS15', 'AMY2A', 'GAS2', 'OR10H3', 'PPP1R21', 'SLC22A13', 'TEX26', 'MLXIP', 'CEP104', 'C20ORF194', 'DHPS', 'ZNF486', 'C11ORF24', 'RAD54B', 'HAUS7', 'SALL3', 'PROK1', 'NFIX', 'EMILIN2', 'EIF4E', 'MSRB2', 'STAM2', 'LINC00264', 'LINC00293', 'NPTX1', 'IFT80', 'SYNPO', 'NDOR1', 'DCLK2', 'ZFPM1', 'ZNF513', 'C20ORF24', 'GIMAP8', 'NPPC', 'IFT140', 'KHDC3L', 'PXDN', 'LRRC37A2', 'TMEM116', 'TYW3', 'AHCY', 'SLC5A12', 'NOSTRIN', 'GNB2', 'BUD13', 'CSF2', 'NNAT', 'TNK1', 'CHST8', 'CNGA2', 'ANKRD23', 'NKAIN2', 'BBS7', 'CCL7', 'AMN', 'YTHDC1', 'ALG1L', 'CDK5RAP3', 'MDC1', 'KRBA2', 'ZFP91-CNTF', 'URM1', 'C9ORF69', 'ARFGAP3', 'OR4F5', 'NRXN2', 'TCERG1', 'APOL2', 'MCM2', 'FLAD1', 'GRIPAP1', 'DNAI2', 'UCKL1', 'SCGN', 'SUPT20HL2', 'HNRNPCL1', 'SNORA49', 'GPR65', 'PDGFB', 'PCYOX1L', 'RPL7', 'KCNA3', 'CDC42BPG', 'TMEM150A', 'UBQLN3', 'CNDP1', 'ELMOD2', 'SPATA3', 'RAD51', 'OR12D3', 'PTH2R', 'SRSF9', 'HCG18', 'TCEAL1', 'DDX53', 'XRCC3', 'TSPAN2', 'FAM208A', 'LGALS4', 'LRRC7', 'FOXS1', 'ZNF251', 'DEFB115', 'WNT11', 'C17ORF77', 'NKX1-2', 'SNORA12', 'DEFB119', 'FMO9P', 'SYS1', 'ME2', 'NFX1', 'PEX2', 'CIAO1', 'PAIP2', 'H2BFM', 'ACSL1', 'TP53BP2', 'C11ORF49', 'APPL2', 'C11ORF71', 'GALNT16', 'LMF1', 'MRO', 'SMPD2', 'PDIA2', 'B3GNT8', 'SSBP3', 'HOOK2', 'HIST1H2BJ', 'SLC17A6', 'RAB3B', 'PDE1A', 'HBP1', 'FRMPD2', 'RNF169', 'FBLIM1', 'TAF6L', 'COL1A2', 'LINC00896', 'SLC4A2', 'LIPI', 'AFF1', 'C17ORF75', 'FBXO21', 'PLLP', 'ADRBK1', 'SRD5A1', 'LOC284441', 'OR52W1', 'SBSN', 'NKRF', 'SAV1', 'CKAP2L', 'CHEK2', 'TRMT1L', 'CSNK2B', 'UGT2B4', 'EML5', 'TUBB4B', 'KLHL7', 'SDSL', 'GOLGA2P6', 'RRAS2', 'ZNF436', 'RFC4', 'OR2C1', 'C15ORF26', 'A1BG-AS1', 'KMT2E', 'RAP1GDS1', 'GPR141', 'ZDHHC16', 'CPSF2', 'LPPR3', 'GCH1', 'TNNT2', 'NAGA', 'FOXK1', 'RAB42', 'GATA1', 'PVALB', 'CLEC2L', 'CYSTM1', 'PSMB7', 'SAMD4A', 'LKAAEAR1', 'PQLC1', 'WASH2P', 'RBMXL3', 'INS', 'DDX3Y', 'PAPOLA', 'TNFSF18', 'USE1', 'SLC5A6', 'SYNE3', 'S100A3', 'DENND4B', 'FAHD1', 'PPP6R2', 'SNORA40', 'SLC25A53', 'TMEM47', 'PIGV', 'GFI1B', 'BARHL2', 'TSPAN12', 'PPP1R13B', 'TMPO-AS1', 'PRPF3', 'SCAMP3', 'DPH2', 'NLGN2', 'NRDE2', 'ZNF487', 'C4ORF32', 'C6ORF89', 'PNN', 'PRRG2', 'TMEM26', 'CECR5', 'POSTN', 'DNAH9', 'FABP6', 'APOBR', 'ABAT', 'KCTD10', 'SCML4', 'PTER', 'SLFN13', 'YME1L1', 'KRTAP24-1', 'CTTNBP2', 'RTF1', 'GTF3C2', 'CHST13', 'HPGDS', 'OR9I1', 'GAPVD1', 'ENAM', 'ITFG2', 'OPRK1', 'PUS3', 'EPPIN', 'SF3B6', 'PCK1', 'PLCG2', 'RPS12', 'PPFIA2', 'MMP1', 'SLC35F6', 'STARD5', 'SFTA2', 'ZNF574', 'MUC21', 'RASGRP2', 'MAP7D1', 'C11ORF16', 'TDRG1', 'SUSD3', 'NDRG1', 'ACTL6B', 'CLEC16A', 'YIF1B', 'CSRNP3', 'LOC100190986', 'MAP3K19', 'SPATA33', 'KISS1R', 'CXCL8', 'VPS36', 'RNF17', 'STEAP3', 'NDUFAF6', 'SNORA5C', 'SLC33A1', 'C15ORF62', 'FAM104A', 'SDS', 'LSM2', 'PELI3', 'PRSS22', 'RAB33B', 'ZNF25', 'WNK3', 'NDUFAF1', 'STK16', 'PTPRC', 'MGC27382', 'PCID2', 'PCDHGC3', 'IHH', 'SCHIP1', 'PGM2L1', 'PABPC1L', 'SNX12', 'NF1', 'GCC2', 'PANX3', 'BIN3', 'XRN2', 'GTF2B', 'RNASEH2B', 'RPL19', 'LINC00696', 'ZNF208', 'TMC3', 'CCDC110', 'CILP2', 'TOR1AIP2', 'MYCNOS', 'SPAG11B', 'RPSAP9', 'INE1', 'TSPYL2', 'HIST1H1D', 'CNNM3', 'BDNF-AS', 'CCT6A', 'NXNL2', 'ZKSCAN2', 'ENC1', 'CD1D', 'ACSS1', 'UNC93A', 'RASAL3', 'COL4A6', 'MPV17L', 'DNM1P46', 'MRS2', 'TBXAS1', 'LPO', 'TMEM81', 'ARF5', 'UST', 'PPP1R1B', 'DSC1', 'WWOX', 'CD99L2', 'SMCR5', 'ADGRF1', 'SNORA71E', 'BTBD6', 'ELK1', 'SMO', 'LRRC57', 'PLAGL2', 'HIVEP2', 'KIAA1551', 'CENPBD1', 'KRTAP19-6', 'IFT88', 'CDKL2', 'RNMT', 'UGCG', 'SCARNA21', 'C6ORF52', 'EHD3', 'GALR1', 'AMH', 'HSPB3', 'COL5A3', 'KLK11', 'CATSPERB', 'NKAP', 'PAPPA2', 'NLN', 'IFNB1', 'LINC00620', 'SFPQ', 'TIMM17A', 'CELA3A', 'CCDC122', 'TMEM252', 'EXT2', 'HS6ST2', 'RMRP', 'NKD2', 'CEACAM4', 'LINC-PINT', 'SMIM10L2A', 'FOXI3', 'IFITM5', 'SREK1', 'MON1A', 'U2AF1', 'CLMN', 'ECHDC3', 'ELK3', 'HMOX2', 'RABGGTA', 'GCLC', 'MOV10', 'CCDC178', 'SERINC2', 'LINC01106', 'KIAA0556', 'CFAP69', 'CTTNBP2NL', 'FBRS', 'FMNL2', 'GFPT1', 'COMMD2', 'OR2Y1', 'GPLD1', 'MEPE', 'ASB16', 'MRAP2', 'TGM7', 'WFDC8', 'EHMT1', 'ADAM2', 'EBP', 'PUS7', 'ADCY1', 'COMT', 'ARRDC2', 'CTSW', 'NOP58', 'FCAMR', 'PPIP5K1', 'MDP1', 'NEGR1', 'DCAF12L2', 'XRCC1', 'INPP5D', 'MTMR4', 'ABT1', 'PHF2P1', 'APOPT1', 'CCDC159', 'NCAPG2', 'ZZZ3', 'DAD1P1', 'CIT', 'SCARNA15', 'TAAR1', 'DLEU2L', 'ZNF768', 'TTC31', 'CCL8', 'TAS1R3', 'MS4A15', 'TMEM225', 'PTPRF', 'LINC01366', 'DTD2', 'C1QTNF9B-AS1', 'PDCD1', 'COL6A4P1', 'ACTA2', 'SPATA31A5', 'OR4K15', 'EIF4G3', 'SLURP1', 'GRSF1', 'SAP30BP', 'GCNT4', 'OR1E2', 'TIGD2', 'SLC6A17', 'CCDC148', 'LINC00936', 'LINC00238', 'MLF1', 'SCG5', 'ITGB3BP', 'PLBD2', 'ABCB7', 'NCR3LG1', 'CCL18', 'CHIA', 'SLC6A12', 'FHL5', 'GPR52', 'RAD1', 'CCDC85C', 'CWC27', 'NUBP1', 'SCARNA18', 'UQCRH', 'CCNC', 'ZC3H7A', 'CANT1', 'MTERF4', 'TGM5', 'FAM195B', 'LINC01020', 'TMBIM6', 'MME', 'IL17RB', 'EIF2AK4', 'SYT17', 'REG1B', 'PTGFR', 'RPN2', 'CAPS2', 'NR2F6', 'C2CD4D', 'LRP12', 'KRT12', 'KIAA1324L', 'CLMP', 'KLF2', 'ZNF286B', 'HGD', 'USP17L9P', 'PLCL1', 'REM1', 'TCF7L1', 'NAALAD2', 'AXIN2', 'CFD', 'HOMEZ', 'GNB1L', 'TH', 'FANCE', 'STAG1', 'UROC1', 'MOB3C', 'OR8B12', 'P2RY4', 'PEX5L', 'STARD7', 'EGOT', 'DNAJC30', 'SNAR-B2', 'TRIT1', 'TIMP3', 'HAND2-AS1', 'RHBDD2', 'COL10A1', 'FAT1', 'C1QTNF9B', 'DEPDC1', 'ONECUT3', 'ANKRD39', 'AK7', 'MARVELD3', 'YLPM1', 'DDX60L', 'GRIN2B', 'RELB', 'SMYD2', 'ANAPC4', 'TRADD', 'STAG3L2', 'OOEP', 'RACGAP1', 'LOC221122', 'GUCY2F', 'TPSB2', 'NXF2B', 'ACAP1', 'OR11H1', 'JADE1', 'MARK2', 'SUPT20HL1', 'RIMBP2', 'KRTAP9-8', 'ZNF578', 'PRDX1', 'IRF2BP1', 'ANTXR1', 'COL8A1', 'PLK5', 'HABP2', 'COQ10A', 'SORCS1', 'XIRP1', 'THBS3', 'NLGN1', 'BPGM', 'ZNF17', 'TPD52L2', 'FAM58A', 'ASIP', 'DVL2', 'ZNF548', 'OR5W2', 'MT1DP', 'DDX39A', 'FAM212A', 'PDIA3', 'DEAF1', 'ADGRG3', 'DEGS2', 'DNALI1', 'SULT2B1', 'SREBF2', 'MMRN1', 'PYCR1', 'ANK3', 'CHRAC1', 'RBX1', 'CLDN9', 'IMPA1', 'SERPINB5', 'PGAM2', 'UBE2N', 'TXNL1', 'RAD9A', 'ZAR1L', 'COL11A2', 'SCAF4', 'OR2B2', 'LETM1', 'GRPR', 'MLEC', 'GALNT11', 'FRMD7', 'RSU1P2', 'ZNF367', 'GRAMD4', 'NUBPL', 'HSPB8', 'MPZ', 'HES4', 'TTC16', 'SFMBT2', 'FLJ42393', 'AP5Z1', 'LRRC3', 'WAS', 'PRMT2', 'TUBA1B', 'TSSC4', 'C5ORF58', 'OR52D1', 'TMEM141', 'MAPK10', 'CXORF56', 'ICAM1', 'ARF4', 'BTBD9', 'C5ORF60', 'OR2M1P', 'GLT6D1', 'RPS9', 'RAB19', 'GYPE', 'ATG12', 'NYX', 'ZNRD1', 'TMF1', 'GAS7', 'C1ORF68', 'SYDE2', 'DDX56', 'EEF2K', 'KRT18P55', 'NDNL2', 'WWC2-AS2', 'RNU4ATAC', 'CSMD1', 'IKZF4', 'CFAP36', 'NDUFS8', 'CETP', 'AXL', 'CYTL1', 'CYP8B1', 'RXFP4', 'LCA5L', 'SHMT1', 'CDH24', 'LTBP2', 'PRR26', 'ATG4B', 'ZMAT1', 'SPECC1', 'ZNF326', 'FAS', 'ARL4C', 'SGPL1', 'SLK', 'C22ORF34', 'CHCHD3', 'CTSA', 'LILRA5', 'GCA', 'AKR1B10', 'CES2', 'FAM160A2', 'MRPL10', 'SLC35A1', 'DNAJA2', 'RBP5', 'ABCD4', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.135368235690525e-15 NRMSE: 6.584771560922462e-16 MAPE: 2.401034847814673e-12 Pearson Correlation: 0.3519034494296374 Spearman Correlation: 0.3508846743724984 Coefficient of Determination: -1.5231755408468586 RMSE: 1.8453790466590134 NRMSE: 0.36289926386089033 MAPE: 4129.982154367578 Predictor: ElasticNet Pearson Correlation: 0.9017130158090165 Spearman Correlation: 0.8576003311166799 Coefficient of Determination: 0.7908398021664518 RMSE: 0.5149985270717555 NRMSE: 0.08200352330686211 MAPE: 181.01918493609082 Pearson Correlation: 0.47809285869789436 Spearman Correlation: 0.444347186373895 Coefficient of Determination: 0.14038980121796307 RMSE: 1.0771163836386297 NRMSE: 0.21181813211905956 MAPE: 1851.5195868546566 Predictor: RandomForests Pearson Correlation: 0.7861199562656148 Spearman Correlation: 0.7139730542574436 Coefficient of Determination: 0.613215061688841 RMSE: 0.7003275994803025 NRMSE: 0.11151358228723647 MAPE: 139.39846160889098 Pearson Correlation: 0.6509899837678113 Spearman Correlation: 0.6223743438197484 Coefficient of Determination: 0.4165440599249466 RMSE: 0.8873927678244982 NRMSE: 0.17450842025220709 MAPE: 465.1488416287213 Protein: CDH2 x_train_column_count: 474 x_train columns: ['C19ORF12', 'CHTOP', 'DUPD1', 'MT1B', 'SNORD22', 'TMSB4XP8', 'ACOX2', 'TMEM80', 'CCL26', 'LCE1F', 'XPNPEP1', 'CRX', 'NOL6', 'CMTM8', 'ADAM33', 'ABCA8', 'CLPP', 'ZC3H13', 'IL27RA', 'IL1F10', 'SLCO2A1', 'NUP62CL', 'TCP10L', 'KIFC2', 'GPRC5D', 'RNF44', 'CCDC105', 'ZNF444', 'ATP2B2', 'MOBP', 'PSAT1', 'EED', 'VPS26B', 'AACSP1', 'CCRL2', 'RASSF9', 'DUSP28', 'FADS2', 'TAF1D', 'ZKSCAN3', 'C5AR1', 'MPLKIP', 'RFWD3', 'PTRH2', 'OR52B4', 'SLC25A47', 'ANKRD29', 'PPP2R3A', 'KIAA0513', 'EPS15', 'GFPT2', 'COTL1', 'SRSF4', 'MAGEF1', 'SEMA4B', 'TECPR1', 'REXO1', 'ITM2C', 'OR1I1', 'ZIK1', 'PCM1', 'UBL3', 'MEDAG', 'TTYH2', 'MTCH2', 'ANTXR1', 'KCNK12', 'ZNF527', 'ZNF764', 'SLC25A11', 'MSR1', 'FUBP3', 'TLN2', 'UGT1A4', 'ASUN', 'LOC494141', 'MTG1', 'CLEC14A', 'SNX1', 'PRX', 'CHMP1A', 'TRPM7', 'PARP9', 'DCAF13', 'IL18R1', 'KRTAP13-1', 'SAR1A', 'GLT8D2', 'GHRHR', 'CHST6', 'SLC35G2', 'ADIPOQ', 'IQCF6', 'ZNF649', 'TGFBR2', 'PDCD2', 'ITGB7', 'ARG1', 'FSHB', 'SETD8', 'C7ORF72', 'FOXD4L1', 'SSH2', 'CASP6', 'ZNF648', 'OR1S2', 'SLC1A7', 'FUT6', 'PTGER2', 'ACP6', 'C6ORF141', 'ZBTB24', 'AGPAT3', 'GRM7', 'SEMA3E', 'NR6A1', 'AFTPH', 'OR5L1', 'ST3GAL2', 'MED19', 'IDH3G', 'MAP2K3', 'TMEM102', 'KIAA0930', 'SP3', 'ANKLE2', 'KIAA0754', 'RAP2A', 'RBMXL2', 'SNRPD3', 'LINC00847', 'OR10Z1', 'LINC01550', 'CLEC17A', 'FAM179B', 'STAP1', 'TXNDC16', 'PTCHD3', 'RPIA', 'CFAP20', 'TTC17', 'GFAP', 'WHAMM', 'OR2T2', 'CRYGC', 'SRCAP', 'ADGRG4', 'SLC29A4', 'CTSF', 'MUM1L1', 'CETP', 'SAA4', 'ELAC1', 'OR5K2', 'SPC25', 'PDX1', 'ECI2', 'MBOAT7', 'C5ORF51', 'MMRN2', 'OSBPL5', 'CCDC132', 'CAB39L', 'CCNI', 'BTBD10', 'PLA2G5', 'MGAT4A', 'ISG15', 'SAV1', 'PFDN6', 'IRX1', 'GZMH', 'MUC12', 'CYR61', 'R3HDML', 'ZMPSTE24', 'MFSD6L', 'RBM25', 'OTOL1', 'CRY2', 'CITED4', 'SNORD15A', 'UMODL1', 'SOX10', 'AGAP2', 'KRT25', 'FADS1', 'GSK3B', 'DYNC1H1', 'ACSL4', 'PHF11', 'GJB6', 'ABI1', 'BAAT', 'RTKN', 'USP32P2', 'LIMK2', 'C22ORF42', 'DFNA5', 'SCD5', 'RINL', 'APOB', 'SLED1', 'DNASE2B', 'RBM38', 'HELZ', 'CLTCL1', 'FBXO8', 'AAAS', 'OR4C11', 'WWP2', 'CRB3', 'ELMOD1', 'NTM', 'TDP2', 'FNDC5', 'NPNT', 'UBA3', 'RAD9B', 'RPS23', 'DHX29', 'CD248', 'ATF5', 'SNX12', 'CDH13', 'TMEM251', 'TDO2', 'DKK1', 'FER1L5', 'BRMS1L', 'MYH7', 'WBP1', 'HNRNPAB', 'C12ORF54', 'NKAIN4', 'TYW5', 'LRRC41', 'C8ORF34', 'ICOSLG', 'GFM2', 'SPDYE3', 'ZNF589', 'GLTSCR2', 'CT47A7', 'DYNC1I1', 'STK3', 'TTC30A', 'RARS', 'JSRP1', 'RIPK1', 'PXDC1', 'ZRANB3', 'ZBTB48', 'GEMIN8', 'CACTIN', 'RPE', 'SPATA9', 'TSHZ1', 'RGPD8', 'RCHY1', 'MYSM1', 'HOXB13', 'ERP29', 'NTNG1', 'SLC44A5', 'FEZ1', 'ADGRG5', 'PPP1R12B', 'CRACR2B', 'CNDP2', 'PRH2', 'RANBP3L', 'FLJ16779', 'PRR26', 'OR2V2', 'ATP6V1G3', 'FLNC', 'TMEM169', 'CCDC47', 'GPR35', 'TCHHL1', 'SAMD12', 'RBMXL3', 'SCML2', 'MGST3', 'LCE1B', 'TIMM17B', 'AARS2', 'RAPGEF3', 'ATXN1', 'ZBTB32', 'TCP10L2', 'HIST1H4K', 'ANKS3', 'LSM3', 'FAM20A', 'CCDC88A', 'GPC3', 'CNIH3', 'RGS19', 'DNAJA1', 'RPL8', 'SLC25A46', 'PREB', 'DDR1', 'MT3', 'PPP2CA', 'RASSF10', 'SBF1', 'KLHL23', 'LANCL3', 'FAM69B', 'HBM', 'CENPV', 'KHDRBS1', 'RBSN', 'GGTLC2', 'LOC391003', 'KRTAP13-2', 'ST7-AS1', 'TMED5', 'PSMC1', 'THBS4', 'SYNJ1', 'GRN', 'WDR5B', 'SLC22A16', 'PRUNE2', 'CCDC74A', 'PCDHB9', 'OR4C15', 'CLK3', 'GSTA1', 'STKLD1', 'CCDC103', 'PVALB', 'ZNF300', 'BAG2', 'NINJ1', 'FAM161B', 'DNAH3', 'GCM1', 'C17ORF99', 'SP4', 'WNT8B', 'ATP5EP2', 'CDC42BPG', 'WDR38', 'SDHB', 'ZNF526', 'IL25', 'SEMA6A', 'ACOT7', 'SAPCD2', 'PYGM', 'CST9L', 'PGA5', 'UCP2', 'LOC401052', 'SIRT3', 'GNAI3', 'MAN2A1', 'KIF7', 'AP3S1', 'PTPRS', 'TSPAN19', 'PLOD3', 'H2AFJ', 'UVRAG', 'STH', 'FAM216B', 'CRAMP1L', 'BTBD6', 'MN1', 'INSL3', 'TATDN3', 'MYL7', 'RASSF5', 'DRD2', 'RPL17', 'TRIP10', 'CDO1', 'CBLB', 'ARHGAP12', 'RFNG', 'BCL7A', 'SUSD6', 'ASB16', 'CRTC2', 'NME4', 'GTF2H3', 'RPL32P3', 'ANP32E', 'HAR1B', 'CNR2', 'SCUBE2', 'IFNK', 'HMBS', 'UBE3C', 'ZNF687', 'ADAM28', 'ITGA9', 'OR9A4', 'VPS37D', 'TMEM45B', 'PLIN5', 'ERMARD', 'SETX', 'CELF6', 'CYP2C19', 'ZNF304', 'TMEM74B', 'LCNL1', 'SLC35C1', 'LINC00111', 'KLHL15', 'LETM2', 'AFAP1-AS1', 'KIR2DL1', 'NGLY1', 'ZC3H10', 'KHK', 'CREBRF', 'WNT9A', 'BPIFA4P', 'ENC1', 'RPS6KA3', 'TUBB7P', 'CA9', 'GRM5', 'TAF5', 'EXOSC7', 'BCHE', 'OR5T1', 'CCR5', 'OR9Q2', 'OR5AR1', 'NADK2', 'FAM134C', 'PDILT', 'TRPC6', 'ARL17A', 'LHB', 'IGF2', 'DNAJC5', 'OR2M5', 'UBXN11', 'BHLHE40', 'FAM90A1', 'TLN1', 'ROS1', 'DMGDH', 'GPR158', 'SRGAP2', 'PGM2', 'SECISBP2', 'TRIM34', 'LOC646214', 'GREB1L', 'IQCF5', 'TTN', 'NETO1', 'TMEM107', 'RPL23AP64', 'TRIM32', 'PRSS55', 'OR5D16', 'TEX14', 'POLR2L', 'UGT8', 'PCDHA2', 'CMSS1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.942393938948859 Spearman Correlation: 0.9273494081003998 Coefficient of Determination: 0.8881063361675458 RMSE: 0.12013296065249808 NRMSE: 0.05900150319360447 MAPE: 482.9411717625006 Pearson Correlation: 0.16520076904349246 Spearman Correlation: 0.11860013042582124 Coefficient of Determination: -39.05426334069705 RMSE: 2.6397074050675147 NRMSE: 0.9871201709206718 MAPE: 3038.481559017486 Predictor: ElasticNet Pearson Correlation: 0.632867691592558 Spearman Correlation: 0.6366323733918674 Coefficient of Determination: 0.3401897194843815 RMSE: 0.29172185871988876 NRMSE: 0.14327481887917526 MAPE: 915.7908343680583 Pearson Correlation: 0.1231648091083539 Spearman Correlation: 0.13339833838130344 Coefficient of Determination: -0.046322434055246386 RMSE: 0.42664256811977536 NRMSE: 0.15954324481415602 MAPE: 3003.1401338486808 Predictor: RandomForests Pearson Correlation: 0.5992609507568184 Spearman Correlation: 0.5529132843850679 Coefficient of Determination: 0.17894380541334554 RMSE: 0.3254212238476438 NRMSE: 0.1598257570097951 MAPE: 375.9080670655329 Pearson Correlation: 0.12351913487133935 Spearman Correlation: 0.1613912410271221 Coefficient of Determination: 0.000574854036710648 RMSE: 0.41697167330544777 NRMSE: 0.15592680788491586 MAPE: 3673.5987493652547 Protein: CDH3 x_train_column_count: 75 x_train columns: ['TMEM180', 'GOLGA7', 'SLC25A52', 'TRAM1L1', 'ZBTB17', 'LRRC10B', 'LINC00483', 'CBX2', 'OSBP2', 'OXCT1', 'PLSCR4', 'HSPBAP1', 'RND3', 'HIST1H4G', 'LETM2', 'BLNK', 'GOLGA8F', 'UBR2', 'PRAMEF5', 'CKS2', 'C22ORF24', 'MTG1', 'SHMT1', 'NAPEPLD', 'SEC14L4', 'WSCD1', 'DAAM1', 'CBX4', 'DAW1', 'ILF3', 'SREK1IP1', 'SNORA45B', 'AHCYL2', 'GPATCH4', 'RNF145', 'UBAP2L', 'ANAPC2', 'IRGM', 'TAPBP', 'TEX43', 'SLC4A10', 'TTC41P', 'DHX29', 'SLC39A14', 'ADCY10P1', 'TCEAL1', 'PHF2', 'IP6K1', 'NUAK1', 'ZDHHC1', 'STRIP1', 'USP35', 'HELQ', 'TTC16', 'MED10', 'FAM26F', 'BEND3P3', 'ENTHD2', 'NDUFV2', 'ZNF800', 'PROL1', 'SHISA7', 'SLCO6A1', 'MYOCD', 'VAMP2', 'SERTAD4-AS1', 'PDE6G', 'MED12', 'CYB561A3', 'PPCDC', 'TBCCD1', 'BCAP29', 'TMEM37', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.528038421983622 Spearman Correlation: 0.5371118688413269 Coefficient of Determination: 0.2788245750909537 RMSE: 0.17304377989957626 NRMSE: 0.12140356113513516 MAPE: 586.6466618709305 Pearson Correlation: 0.29425499785400056 Spearman Correlation: 0.2759959600493772 Coefficient of Determination: 0.01012137595631124 RMSE: 0.22225874968523512 NRMSE: 0.20052395788958322 MAPE: 360.0383937784701 Predictor: ElasticNet Pearson Correlation: 0.45944732535421245 Spearman Correlation: 0.48494488494248067 Coefficient of Determination: 0.1938290178399571 RMSE: 0.18295703540942487 NRMSE: 0.1283584746375827 MAPE: 479.271404588659 Pearson Correlation: 0.35318830132479645 Spearman Correlation: 0.3304804299305478 Coefficient of Determination: 0.10521975909389991 RMSE: 0.21131293712448054 NRMSE: 0.19064854169063286 MAPE: 206.0254130634713 Predictor: RandomForests Pearson Correlation: 0.5402315713284047 Spearman Correlation: 0.5456410441357205 Coefficient of Determination: 0.23209631148164567 RMSE: 0.17856194603113795 NRMSE: 0.1252749803776856 MAPE: 438.24712339177427 Pearson Correlation: 0.3839360675688193 Spearman Correlation: 0.35005673387448727 Coefficient of Determination: 0.12481701719092142 RMSE: 0.2089860637910114 NRMSE: 0.1885492144380691 MAPE: 134.8238632063734 Protein: PTEN x_train_column_count: 886 x_train columns: ['FAM223B', 'NME2P1', 'ACSL4', 'PMP22', 'HLTF', 'ZMAT3', 'LRRC42', 'GUCY1B3', 'ANKRD37', 'FKTN', 'IL17D', 'MYLK2', 'RD3', 'S100A1', 'GGT3P', 'TNNT3', 'SMOC2', 'S100A9', 'UBE2W', 'BLK', 'LYPLA2', 'SRI', 'PCMTD1', 'OR8D2', 'ZNF705D', 'ZC2HC1B', 'KRBOX4', 'PNMT', 'KRTAP19-3', 'GAGE2B', 'MARCKS', 'NACC2', 'ZNF140', 'GALNT2', 'ABCB8', 'MYL4', 'FOXR2', 'OR51G1', 'SLAMF1', 'CAMK2B', 'MMP10', 'ROBO3', 'NUDT18', 'TMED7', 'TNFAIP8', 'SBNO1', 'RGP1', 'MX2', 'ZNF252P', 'MFAP3L', 'BAGE', 'CDKN3', 'LACC1', 'C10ORF71', 'HSF2BP', 'LINC01587', 'FSIP1', 'PTP4A1', 'PSMC1', 'ACD', 'DNPEP', 'CCDC176', 'PANK3', 'DRAIC', 'OR51F1', 'GJA5', 'TCAF2', 'CNN2', 'KRTAP9-8', 'DMRTB1', 'SNRPD2', 'ATE1', 'RMST', 'MCM3AP-AS1', 'ODF3B', 'RPL23AP64', 'SLC22A2', 'POU2F3', 'GRPEL2', 'EDIL3', 'TP53INP2', 'NNAT', 'ANKRA2', 'DOCK11', 'CCDC185', 'XKR7', 'FAM120AOS', 'ALS2CL', 'EN1', 'ADCY10P1', 'ZSCAN12', 'SNHG20', 'PAEP', 'GPX6', 'SKIDA1', 'DDX56', 'PAX2', 'SMIM11', 'OSBPL7', 'ARPP21', 'ADGRG4', 'RNASEH2C', 'ZNF717', 'PCDHGA10', 'RECQL4', 'GUCY1B2', 'PHKB', 'TSPAN14', 'RSU1', 'REXO1L1P', 'LPCAT3', 'SNORA53', 'PROC', 'OSGIN2', 'ELK4', 'NKAPL', 'SLC6A1', 'NBEAL1', 'CNTFR-AS1', 'HIP1R', 'STOM', 'ZNF668', 'CMTM1', 'LINC00596', 'NLGN4X', 'C1ORF174', 'PGP', 'LBHD1', 'RABGGTA', 'VPS37B', 'XKR3', 'ANO8', 'MFF', 'CALY', 'SMAD1', 'SLC7A5P1', 'AZIN1', 'SYTL3', 'SLC25A51', 'NARS', 'OR6B1', 'MATR3', 'SFTPC', 'FAM60A', 'ZSCAN29', 'FAM138E', 'STUB1', 'FBXL12', 'PSMD5', 'LRRC14', 'VWA5B1', 'LIMK1', 'SUSD2', 'OR6C1', 'KLHL20', 'ARG1', 'CLMP', 'GOLGA8G', 'METTL23', 'OR51B2', 'GLCCI1', 'FAM63A', 'RNFT2', 'VLDLR', 'RNF121', 'ZFAND4', 'SELPLG', 'SEZ6L2', 'ZNF609', 'KCNJ1', 'AEBP2', 'TMEM132B', 'KRT27', 'OR1L8', 'FAM26E', 'ZNF491', 'CFAP43', 'C8ORF46', 'HPRT1', 'ADH7', 'SIPA1L1', 'TMCO5A', 'SLC35A5', 'FBXO41', 'NALCN', 'NAIP', 'TTLL10', 'ZNF137P', 'ZNF182', 'IL17A', 'NEFM', 'HIF1A', 'HACD1', 'LRRTM4', 'KLHL3', 'ELOVL1', 'IL2', 'DAAM2', 'IRF2BPL', 'ZC3H14', 'MLH3', 'TMPRSS5', 'IGSF8', 'KCNE5', 'MAN2B2', 'ADAMTS5', 'SDC3', 'UGT1A6', 'TRAPPC11', 'KIAA1143', 'ANKHD1-EIF4EBP3', 'QTRTD1', 'RSRC1', 'EML6', 'LINC00479', 'PLEKHA8', 'LRTOMT', 'GABRB2', 'MAT2B', 'DOCK10', 'MPLKIP', 'POU3F2', 'EWSAT1', 'SMCO2', 'ZNF33A', 'ZBED9', 'RAB40A', 'GRM5', 'CHAMP1', 'MFAP5', 'ZFYVE28', 'FOXO3B', 'MRPL2', 'BIRC3', 'MRPL9', 'AGA', 'CCR5', 'TBP', 'ARHGAP5-AS1', 'ZPR1', 'TEX13B', 'B9D2', 'GNG13', 'C1ORF168', 'OTOL1', 'NDUFB2-AS1', 'FAM74A1', 'NOTCH3', 'KGFLP1', 'ELK3', 'PITPNM3', 'OR5AR1', 'SNORA54', 'FBXL6', 'EPB41L4A', 'SAMD5', 'MEIS3P1', 'ROBO4', 'SNAP91', 'TDG', 'ZNF641', 'NFIB', 'KCNA2', 'PSG2', 'SDHAF3', 'SACS', 'PAH', 'PIAS3', 'NME1', 'WFDC13', 'SUPT4H1', 'EGFL6', 'SYCE3', 'CACTIN', 'KLF12', 'MDFI', 'OR3A1', 'PARPBP', 'UGT2B7', 'CYP4F8', 'C8ORF74', 'TMEM63A', 'LINC00917', 'ZCCHC14', 'ZNF484', 'MICU3', 'ZNF595', 'LUZP1', 'RPS10', 'KRT26', 'GLYATL1', 'DOCK7', 'HSFX2', 'SFTA3', 'OR5M1', 'PACSIN2', 'CCDC85C', 'APPL2', 'C1ORF226', 'FIRRE', 'GCNT4', 'PIGA', 'CATSPER3', 'LINC01553', 'ZNF77', 'TMEM52B', 'TCHP', 'CHP1', 'LAMA4', 'DEFB131', 'STRADB', 'ITGB5', 'EIF3A', 'BTBD10', 'DTWD2', 'VPS13D', 'TBX19', 'PRDM4', 'RP9P', 'VPS4A', 'TMED10', 'RFK', 'OSTC', 'RPRM', 'FBXW10', 'TMEM205', 'LINGO2', 'ZC3H8', 'USP51', 'NUDT8', 'C1D', 'ABCC13', 'FHL5', 'SLC44A4', 'SYT8', 'DUSP23', 'TSHZ1', 'LINC00092', 'TCAIM', 'FAR2', 'LSMEM2', 'SMARCA4', 'TMEM185A', 'MBNL1', 'XRCC5', 'ZNF75D', 'PRUNE', 'COMMD4', 'PSMG3-AS1', 'FFAR4', 'ZNF763', 'MCM4', 'SOD2', 'OR13A1', 'MXD4', 'ZNF674', 'APOA4', 'NME9', 'TCEAL1', 'LCE1C', 'LNPEP', 'TIMMDC1', 'PGF', 'UNC119B', 'USP27X', 'HAP1', 'FLJ16779', 'SH3BGR', 'SUGCT', 'CTAGE1', 'TBC1D28', 'GPR182', 'NUSAP1', 'MAP3K11', 'XCR1', 'ADIG', 'FERMT3', 'EPDR1', 'SIGLEC9', 'PTX4', 'LINC00961', 'RRAGD', 'UPK3B', 'CST4', 'PTENP1', 'RTN1', 'OR2A12', 'FAM76B', 'TIAM2', 'C4ORF48', 'FBN2', 'PPAPDC1B', 'CCDC67', 'HACD2', 'GML', 'PSMD12', 'FRMD3', 'C20ORF194', 'VWA5B2', 'IL22RA1', 'STAT2', 'RGS9', 'SYT1', 'PDCD6', 'GAGE12D', 'LINC00314', 'ARHGEF19', 'C4ORF22', 'C5ORF52', 'MYNN', 'OR11H12', 'KPTN', 'OR4K17', 'GJD3', 'GMCL1', 'IMMT', 'CCIN', 'LOC100272216', 'RSC1A1', 'CCDC7', 'NDUFV1', 'WDFY1', 'POLB', 'SULT2B1', 'PAX8', 'GMFB', 'C19ORF54', 'RNF111', 'TRIM16', 'SLC14A2', 'ZNF486', 'INSL5', 'SPACA3', 'IGF1', 'ANKHD1', 'FBXL14', 'MBD3L2', 'SPNS2', 'FZD6', 'MIDN', 'MED11', 'ABHD13', 'L2HGDH', 'RSPO1', 'H2BFWT', 'PCDHA9', 'ZIC1', 'HMOX1', 'KIAA1107', 'DCLRE1A', 'LOC100129034', 'OMP', 'FBXL19', 'GALNT6', 'WDR49', 'GPR173', 'NIPA2', 'GHRHR', 'MUC4', 'ACTR1B', 'COLQ', 'RBP3', 'SLC45A3', 'KIF26A', 'CNOT4', 'SLC12A9', 'IMPA1', 'BTNL9', 'LINC01011', 'HCRT', 'RASEF', 'GOLM1', 'SCRN1', 'FAM196B', 'MMEL1', 'ANKRD53', 'THEM6', 'ZYX', 'NCOR1P1', 'ERCC2', 'TMEM206', 'DDIAS', 'ZNF131', 'ADAM29', 'ARHGEF18', 'DAPK2', 'ITPK1', 'WNT8B', 'PDE11A', 'CCNB3', 'NAB1', 'SLC7A2', 'CBWD2', 'GPR162', 'ZEB1-AS1', 'STAC2', 'SSH2', 'GPRASP2', 'AFP', 'LIN7C', 'HFE2', 'USP4', 'UEVLD', 'HHLA3', 'GSK3B', 'FAF1', 'PPIA', 'ATRAID', 'KLHL30', 'LMOD2', 'TMEM14B', 'SETDB2', 'NLRC3', 'RPL13AP17', 'OR5T2', 'PRORSD1P', 'ARRDC5', 'FNDC4', 'SLC25A2', 'NDRG2', 'ACBD6', 'SCRN3', 'BCYRN1', 'SHROOM4', 'TPRN', 'NID2', 'PRB1', 'NUDT13', 'SNAR-I', 'RAB9A', 'SLC22A18AS', 'ALOX5', 'PAX6', 'ZNF766', 'MFSD5', 'WFDC2', 'DOCK9', 'PIGU', 'PTPN12', 'TRPV1', 'GANC', 'SEMA3G', 'TMEM184A', 'PRR22', 'CXORF40B', 'GP9', 'SUFU', 'CDKN1A', 'VOPP1', 'THPO', 'PABPC1L2B', 'PLXNB1', 'CXADRP2', 'MRPL21', 'GCSAM', 'GDPD5', 'APOA5', 'CRISP1', 'GSDMA', 'OR2M7', 'BEX1', 'C8ORF33', 'INTS4P2', 'ZNF180', 'USP47', 'LPAL2', 'EIF2B5', 'LINC00710', 'CADM2', 'PRLR', 'RTN4R', 'SF3A3', 'C1QTNF6', 'TECR', 'BRDT', 'MSTO2P', 'RNASE8', 'CIC', 'GCM2', 'KRTAP1-5', 'ATAD2B', 'MYSM1', 'MYOC', 'SMCR8', 'CKLF', 'C3ORF52', 'PRSS42', 'POTEC', 'ANKRD30BL', 'PCSK1', 'SMPD3', 'CREBZF', 'FGF14', 'ANKRD26P1', 'RFXAP', 'NEURL4', 'HNF1A', 'WDR1', 'TAF7L', 'CYP1A2', 'ISCA1P1', 'SNX7', 'NPY1R', 'AKR1E2', 'CDC40', 'ANKRD22', 'ITPKA', 'HAUS7', 'TRAK2', 'SNORA14A', 'ARHGAP19', 'RILPL2', 'TSPAN8', 'PCDHA7', 'CMSS1', 'NDUFAF2', 'BCAS1', 'GARS', 'RPL26L1', 'SMARCAD1', 'TSC22D4', 'TCP11', 'MRPL16', 'ZEB1', 'STAG3L3', 'MYT1', 'MYOM3', 'ZNF565', 'RCAN2', 'GNL3', 'PAPOLA', 'NFE2L3P2', 'ABCC5', 'PRPS1L1', 'HILPDA', 'ATR', 'ACVR1', 'BCL2', 'MAML1', 'FAF2', 'ARHGEF39', 'DNM1P46', 'LOC100287704', 'PAK4', 'ANGPT1', 'N4BP3', 'POP1', 'ARHGAP22', 'ECM2', 'SNX8', 'TCTEX1D1', 'DLEU2L', 'PKP4', 'LRRC27', 'RAB6C', 'ASAP3', 'PLLP', 'CBLN3', 'PCM1', 'POLR3D', 'DBF4B', 'DST', 'RHPN1', 'TGM5', 'SNORA80A', 'CUBN', 'KLHL33', 'NGLY1', 'CDH16', 'TCEA2', 'RRN3P2', 'AMDHD2', 'CD5', 'CYP24A1', 'CHD7', 'ZNF791', 'DCANP1', 'SCIMP', 'GALNS', 'ZBTB16', 'PSG7', 'TBC1D24', 'NEFL', 'BARD1', 'OR2W3', 'MCM6', 'SLC16A6', 'BAAT', 'RALB', 'MCTS2P', 'HAO1', 'BTBD18', 'GLRX2', 'PDSS1', 'ADAD2', 'VPRBP', 'RNF207', 'TNNC2', 'FAM212A', 'OR5K2', 'SPANXN4', 'PLD4', 'PPAP2B', 'PRAMEF9', 'NDUFB7', 'TRPC4AP', 'GSG2', 'NUDT7', 'SPCS2P4', 'MFSD10', 'SLC18A3', 'ECHDC1', 'SERPINA5', 'TRIM13', 'PBDC1', 'SLC6A4', 'LYPD8', 'PRKCH', 'ADCY5', 'NBEAP1', 'FDX1', 'DCTN4', 'WBSCR27', 'RARRES2', 'CDC14C', 'NUCKS1', 'ALDH1L1', 'FLJ23867', 'OR4C3', 'MDM4', 'RGL4', 'PPAPDC2', 'MOGAT1', 'ADGRB1', 'PLA2G12A', 'CCDC141', 'DUXA', 'TRIM14', 'ATG16L1', 'OR4A47', 'KCTD2', 'ZP2', 'SLC9A3', 'LINC00482', 'YKT6', 'AQP7P1', 'RRM1', 'DKFZP779M0652', 'TCF20', 'TMUB2', 'GJA4', 'SDPR', 'FAM71F1', 'TNRC18', 'GOLT1B', 'CES4A', 'DMBT1', 'MAFA', 'NEURL3', 'CACNA1C', 'PES1', 'DNAJC18', 'DNASE1', 'SPICE1', 'EMP1', 'TMED7-TICAM2', 'MS4A14', 'HCN2', 'NR1H4', 'PDDC1', 'NDUFA5', 'NOS1AP', 'MIMT1', 'RALY', 'APOF', 'NME6', 'TP73', 'PGGT1B', 'CTSV', 'EPB41L4A-AS1', 'C17ORF62', 'TNNI3', 'ASB10', 'UGT2B10', 'ATXN3L', 'SPINK1', 'SYNDIG1', 'SNORD115-7', 'MBD3L5', 'KARS', 'NT5C2', 'MINA', 'TMEM39B', 'MTG1', 'KIF20B', 'RSPH4A', 'ARID2', 'OSBPL1A', 'UCA1', 'HEATR1', 'MESDC1', 'ZG16', 'OR6P1', 'PSME4', 'ARRB1', 'COLEC10', 'YAF2', 'TIMM10', 'TMEM176B', 'BRMS1', 'RNF8', 'UGT8', 'FLG', 'CHMP4A', 'CHD5', 'SLC37A3', 'TBC1D10B', 'GUCY2GP', 'NBR1', 'MNS1', 'TPM4', 'ITLN2', 'RGS17', 'SEMA6A', 'SERF1A', 'IGSF1', 'GDI2', 'C1QTNF8', 'CD14', 'TAS2R38', 'HOXA4', 'MRPS10', 'ALDH8A1', 'BST2', 'RPL22L1', 'LINC00896', 'FAM83H', 'LOC440173', 'ADAM5', 'TMPRSS11D', 'SYK', 'C5ORF38', 'TP73-AS1', 'SCRT2', 'CNBD1', 'FAM222A', 'ASB11', 'NPRL3', 'FAM96B', 'EP400', 'ZNF121', 'PELI1', 'MYEOV2', 'OGFOD3', 'NUDT3', 'BMPR1A', 'CC2D2B', 'CDK1', 'CNDP1', 'HAS2-AS1', 'HOXB9', 'MFSD1', 'KIAA0087', 'MEFV', 'CLK3', 'OR1G1', 'TBPL1', 'A1BG', 'SLC6A20', 'SLC9A8', 'ZNF696', 'ACTL7B', 'PIGK', 'NEK4', 'EDDM3B', 'E2F5', 'SNHG10', 'CASP2', 'ZMIZ1-AS1', 'DYNC1I2', 'MTHFD2L', 'LINC00938', 'LOC730668', 'DDX11L2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.1400133232741345e-15 NRMSE: 3.3461235607444837e-16 MAPE: 3.3385318486878457e-12 Pearson Correlation: 0.09767401996654532 Spearman Correlation: 0.10663225227247225 Coefficient of Determination: -1.6765680005429369 RMSE: 1.1807245039048135 NRMSE: 0.22839765241117563 MAPE: 1280.2353097960156 Predictor: ElasticNet Pearson Correlation: 0.837808145619889 Spearman Correlation: 0.7911448096431645 Coefficient of Determination: 0.6594902468124507 RMSE: 0.3320458763050848 NRMSE: 0.051918673489967135 MAPE: 513.8937022334078 Pearson Correlation: 0.3971132798435597 Spearman Correlation: 0.43644185089589643 Coefficient of Determination: 0.13821642442440507 RMSE: 0.6699749145769441 NRMSE: 0.12959898533289696 MAPE: 596.4199718926939 Predictor: RandomForests Pearson Correlation: 0.6014369745270085 Spearman Correlation: 0.5402008120830709 Coefficient of Determination: 0.3062963640385469 RMSE: 0.47393665449169153 NRMSE: 0.07410470713653218 MAPE: 254.48591301757705 Pearson Correlation: 0.40730554379417466 Spearman Correlation: 0.4095607654049889 Coefficient of Determination: 0.14268232879839937 RMSE: 0.668236699566287 NRMSE: 0.12926274751746497 MAPE: 318.4646045747505 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['ZNF17', 'PITPNM2', 'TPP2', 'WFDC10B', 'WFDC3', 'LIF', 'LYPD3', 'SPACA3', 'CRP', 'PFKP', 'ZNF213', 'RPS9', 'CTNNBIP1', 'SART1', 'DIMT1', 'BAK1', 'CSTA', 'MAGED2', 'UPP1', 'CMTM5', 'GALT', 'RPSAP52', 'ABCC11', 'TRAF7', 'GPR156', 'LOC399815', 'PDZD8', 'FBXO38', 'ACTR3C', 'LINC01020', 'SHROOM4', 'GSPT1', 'DHX37', 'WDR87', 'FBXL12', 'GPR101', 'DNAH12', 'SDHAF1', 'UBR5', 'HOXA13', 'TONSL', 'OR2M2', 'PLEKHG6', 'LINC00950', 'SYCP1', 'DDX19B', 'ADAMTS18', 'SCYL3', 'CMTR2', 'INS-IGF2', 'TGM4', 'HFM1', 'SLC39A3', 'CASKIN1', 'LILRA3', 'TMEM37', 'TEX9', 'TAF4', 'MTUS1', 'ANKDD1A', 'ONECUT2', 'ABCC6P1', 'RPL13P5', 'ASIP', 'OTOP2', 'C2ORF81', 'TMPRSS6', 'PRB1', 'ATG10', 'ZNF700', 'DEFB109P1', 'COL5A3', 'INPP5B', 'DMP1', 'NFKB1', 'BLZF1', 'HIPK3', 'MST1P2', 'ZNF618', 'RGPD1', 'CYLC1', 'CLDN19', 'CRYM', 'TSR1', 'LRRC75B', 'ATG9B', 'SLC43A2', 'BIRC5', 'TMEM173', 'WBP11P1', 'INPP5E', 'CCDC101', 'LRRC8C', 'C1QTNF8', 'RGS14', 'PEA15', 'GGTLC2', 'GPR18', 'FAM160B2', 'SIX2', 'FASTKD2', 'SEMA3F', 'SUV39H2', 'RNF185', 'FOPNL', 'PGLS', 'GATAD2B', 'MANBA', 'DENND2C', 'TNFSF13B', 'RPL7A', 'ZBP1', 'MAGEC1', 'ACMSD', 'LARS', 'ACOT4', 'SDK2', 'OSBP', 'SKIL', 'DBNDD1', 'ARRDC4', 'FLJ23867', 'FGD3', 'RTN3', 'BRSK1', 'GNL1', 'FAM131C', 'LRRN2', 'TRPM7', 'UBAP2L', 'NKX6-3', 'VAPB', 'UGT2A1', 'PDCD6', 'HMBS', 'PSG10P', 'CPNE9', 'APBA3', 'ANXA10', 'RABGGTB', 'KXD1', 'LAIR2', 'NMD3', 'RTP5', 'PGAM4', 'CNTNAP4', 'GSTTP1', 'CREB5', 'NME5', 'KCTD11', 'STAU2', 'S100A6', 'SLC47A1', 'AXIN1', 'LINC00304', 'OR4X2', 'NFE2L3P2', 'NFKB2', 'BAGE', 'CSNK1G3', 'NOL9', 'C3P1', 'CYP3A4', 'KIF21A', 'LEAP2', 'KRT81', 'PRPS1L1', 'PRAMEF2', 'PPARA', 'C1ORF64', 'ITGAL', 'MYLK2', 'PEX26', 'GUCY1B3', 'OXTR', 'ASAP3', 'SORT1', 'MIR7-3HG', 'GDF3', 'DDTL', 'CENPC', 'RNASE13', 'ZBED8', 'ZNF333', 'LY6G6D', 'METAP2', 'SYT5', 'OSBPL10', 'C1QA', 'ZNF492', 'OR12D2', 'PRKY', 'TMCO4', 'CCNA2', 'CAMK1D', 'NINJ1', 'ICAM3', 'BPIFB4', 'NCOA5', 'RNF222', 'PPP1R3A', 'CYSLTR2', 'EPHB6', 'RPS3A', 'STOX1', 'MEN1', 'XPNPEP1', 'PCLO', 'SNHG20', 'NSDHL', 'KRTAP9-4', 'GOLT1B', 'MTHFD2L', 'PTBP1', 'SCX', 'OR1L4', 'PDC', 'NRADDP', 'TMEM45A', 'TMEM105', 'SAMD14', 'ADGRG5', 'TMPRSS11B', 'C11ORF53', 'APOA1', 'RPS2', 'TRAM1', 'LINC00957', 'ELMOD1', 'HMGCS2', 'TLR1', 'TNFRSF17', 'DNAJB9', 'TBXAS1', 'SPON2', 'CBLL1', 'PRDX2', 'C7ORF61', 'TAAR9', 'HSPA7', 'OR4D9', 'MPND', 'SCTR', 'HSD3B2', 'EXOSC3', 'ACHE', 'ZFP42', 'OTUD5', 'COMMD5', 'PTPRK', 'LYRM1', 'UBE2W', 'PPP6R2', 'EGFR', 'TM4SF4', 'DCTPP1', 'MACROD1', 'ZSCAN29', 'SCNN1B', 'PHF1', 'MAML1', 'TMEM220', 'UBE2U', 'LOC100132831', 'C11ORF68', 'NOP14', 'ST6GALNAC6', 'BRINP3', 'MIS18A', 'DROSHA', 'CPE', 'GSS', 'PLCB4', 'TOX3', 'CLEC4M', 'LRP2', 'C10ORF55', 'BCL6', 'MED25', 'RIOK2', 'CNTRL', 'PPIB', 'KRTAP10-10', 'CPOX', 'DNAJB12', 'MYBL2', 'DBNDD2', 'DUXA', 'MAPT-AS1', 'ACTR1B', 'TUBA1C', 'ZNF678', 'MASP1', 'NUP37', 'EDN1', 'AARS2', 'ZBTB34', 'ZNF608', 'HMOX2', 'BREA2', 'C1ORF204', 'FAM84A', 'IGF2BP2-AS1', 'OR1J4', 'C17ORF50', 'SLC20A1', 'C2ORF16', 'EEF1G', 'WFDC10A', 'ST7', 'FAM99A', 'ASPG', 'RBM4B', 'PLCB1', 'SCN4A', 'DDX5', 'MEP1B', 'PCDHGB1', 'AIG1', 'PROM1', 'ZNF211', 'YTHDF1', 'SMARCAL1', 'GRIK5', 'SLC22A17', 'TPCN2', 'GSTK1', 'IRX4', 'LRRC16A', 'SLC16A3', 'KIAA1644', 'FAM157A', 'LSS', 'RBM10', 'IST1', 'MORF4', 'MYH14', 'FZD4', 'UBQLN1', 'HMGB3', 'NRN1L', 'DTX3', 'P2RY1', 'METTL25', 'ZNF556', 'IRF2BPL', 'OR8K3', 'AAGAB', 'ZNF343', 'TMEM254', 'CCT5', 'LMBRD2', 'CDK17', 'SCGB1B2P', 'SUPT16H', 'RPL10L', 'NDUFS2', 'EFHC1', 'FER1L6', 'RPIA', 'HMBOX1', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.8638851780335838 Spearman Correlation: 0.8197886009941109 Coefficient of Determination: 0.7462976008261164 RMSE: 0.10097358591391795 NRMSE: 0.06504982181602058 MAPE: 226.66595463007252 Pearson Correlation: 0.049195484421651066 Spearman Correlation: 0.16116161049389646 Coefficient of Determination: -31.364670900252825 RMSE: 0.9448713674881023 NRMSE: 1.235691319542408 MAPE: 1254.2506769616173 Predictor: ElasticNet Pearson Correlation: 0.5377018111010908 Spearman Correlation: 0.49032977816459417 Coefficient of Determination: 0.2307057827146769 RMSE: 0.17582949414135338 NRMSE: 0.1132739533846696 MAPE: 162.2788323693345 Pearson Correlation: 0.09746889750188409 Spearman Correlation: 0.14049801119714714 Coefficient of Determination: -0.1434807400075182 RMSE: 0.17760349919657742 NRMSE: 0.23226770312767595 MAPE: 207.92574271653055 Predictor: RandomForests Pearson Correlation: 0.5964247591938259 Spearman Correlation: 0.540884992809805 Coefficient of Determination: 0.19497417617929302 RMSE: 0.17986654756102038 NRMSE: 0.11587472865905646 MAPE: 161.06229150062262 Pearson Correlation: 0.11965652474416646 Spearman Correlation: 0.14352049277422413 Coefficient of Determination: -0.07033892030162003 RMSE: 0.17182950935071062 NRMSE: 0.22471654920644818 MAPE: 154.0084272191394 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['PLET1', 'FRAS1', 'LANCL3', 'GIGYF1', 'DGKK', 'MED27', 'RHOU', 'TEX11', 'KIF21A', 'KRTAP5-7', 'CCDC18', 'FAM183CP', 'TRIP12', 'MTUS2', 'CYP46A1', 'ERMP1', 'OR5D13', 'LOC727896', 'GOLT1B', 'GOLGA2', 'RIPPLY3', 'TRIB1', 'CLEC18A', 'LINC01138', 'CA5B', 'MITF', 'DNAAF3', 'SSR2', 'SPATA20', 'CBX7', 'TMC1', 'ALDH5A1', 'CDKN2B-AS1', 'TMED6', 'GNRHR', 'LRTM2', 'APAF1', 'WDR74', 'PEX13', 'ZNF260', 'CCND3', 'PCCB', 'BCL7B', 'RNASET2', 'SNHG11', 'SLC25A32', 'ANKRD20A11P', 'CHD4', 'LINC01558', 'GLIPR1L2', 'DIRC1', 'TRIP6', 'KPNA2', 'RGS14', 'ZFAT-AS1', 'PRIM1', 'MTA3', 'HAS2-AS1', 'PRINS', 'AP5Z1', 'SLAMF6', 'SP1', 'STK24', 'HLA-A', 'PRKACA', 'SCN3A', 'FAM167A', 'HSD17B1', 'FAM21A', 'HTATIP2', 'NBL1', 'SCAMP2', 'GCSAML-AS1', 'ABCB6', 'FAM181B', 'HIST1H2BL', 'KCNC4', 'C7ORF66', 'PREB', 'CYHR1', 'LCK', 'PLEKHN1', 'HMGCS2', 'HYPK', 'ERICH1', 'CA7', 'TMEM104', 'KLC4', 'HAUS6', 'CMTR1', 'WDR63', 'ZNRD1-AS1', 'DDX26B', 'WAPAL', 'CRYBB2', 'WASH2P', 'TSPAN2', 'TSPO2', 'ADAMTSL3', 'EFCAB5', 'GCNT4', 'PIGF', 'HIST1H2BO', 'CTNS', 'PSMD6', 'MAGEB16', 'CCDC74A', 'PSG8', 'SLC19A1', 'JAG1', 'PDZD4', 'CCDC149', 'GTF2E1', 'DHRS11', 'TRAIP', 'JAK3', 'ZNF281', 'GFRA1', 'SCMH1', 'ARMC4', 'CARNS1', 'NOP10', 'PPP1R11', 'CECR5', 'FAM66E', 'ADH7', 'APOE', 'ALS2CR12', 'CSPG4', 'DKFZP434L187', 'CCDC40', 'OR13G1', 'MAPK11', 'EIF3G', 'KCNH4', 'OR11L1', 'FBXL7', 'MND1', 'TSHZ2', 'SPN', 'PPFIA3', 'SEC22B', 'CYP7B1', 'MSRB1', 'SLC9C2', 'AP3D1', 'OR52D1', 'BIN3', 'COL3A1', 'NR0B2', 'FEN1', 'CR1', 'TMEM131', 'TAS1R2', 'PWRN2', 'KLHL41', 'LRRFIP2', 'SLC22A8', 'DICER1-AS1', 'FAM53A', 'KEAP1', 'C20ORF27', 'DEDD', 'SLU7', 'GTF2IRD2B', 'PHKB', 'TMEM88', 'C2ORF72', 'TRIO', 'KDELC1', 'AFF4', 'C4BPA', 'PLRG1', 'TLN2', 'C1QB', 'RNF138P1', 'CYP26B1', 'WIBG', 'BRINP3', 'RPH3A', 'ZNF713', 'VWA5A', 'UGT2B11', 'ABCC12', 'MRPL4', 'MTG2', 'CHST7', 'CENPH', 'ISCA1P1', 'RFNG', 'RANBP6', 'AQP3', 'ZNF501', 'SPAG17', 'ANKRD52', 'ZSCAN25', 'RBM25', 'MYT1', 'NGRN', 'TWSG1', 'VHL', 'PRSS54', 'FAM13A-AS1', 'ATP6V0A1', 'MYLPF', 'GRINA', 'VPREB3', 'FAM180B', 'B3GNT8', 'HDAC9', 'KIAA0226L', 'C6ORF1', 'COBLL1', 'TMEM132A', 'CLDN17', 'PLEKHG1', 'ZNF383', 'FCGR2A', 'HOXD10', 'DNAJC5B', 'XDH', 'VEZT', 'CCDC132', 'AGR2', 'FOXD4L3', 'C22ORF15', 'TPRXL', 'NDUFB6', 'C4ORF27', 'DUSP15', 'TEX29', 'CLK3', 'HABP2', 'LIG1', 'ITSN2', 'RRP7A', 'TBCC', 'HNRNPA1P33', 'FAM96B', 'STON1-GTF2A1L', 'C16ORF13', 'LCAT', 'KLHL12', 'HLA-DOB', 'EP300', 'TRIB3', 'ABCA1', 'SPINK8', 'C15ORF40', 'PCTP', 'HAVCR1', 'STEAP2', 'TRNP1', 'INTS4', 'MTSS1', 'SEC22A', 'SLC23A3', 'MT1E', 'DNTTIP2', 'MAFK', 'HAUS8', 'ERI2', 'APTX', 'AMIGO2', 'HBB', 'CCDC65', 'ARHGAP44', 'FBN3', 'CARD11', 'JSRP1', 'FAM110C', 'GDF2', 'DEPDC5', 'PTGFR', 'DEFB118', 'TMEM132E', 'DENND1B', 'C16ORF82', 'LMBRD1', 'FAM20B', 'SH3GLB2', 'PCSK9', 'SORCS3', 'MDFI', 'CX3CL1', 'KCNU1', 'AREG', 'PRSS58', 'WDFY1', 'ACBD5', 'FOXD4L5', 'CD2AP', 'RBFA', 'SNORA12', 'C9ORF163', 'PSD', 'C3ORF36', 'APOA1BP', 'BCKDHB', 'OR11H6', 'CD209', 'PNLDC1', 'TMEM14B', 'HOOK3', 'HNRNPH1', 'TTC30A', 'GCC1', 'SNORA56', 'GRIN3A', 'RHBDD2', 'LRRC30', 'USP34', 'ANKRD30BP2', 'EIF4A3', 'TRUB1', 'CDCP2', 'IL9', 'FSD2', 'SLC52A2', 'ZNF195', 'LOC145783', 'ZNF821', 'SUOX', 'HADHA', 'SGCG', 'ATP12A', 'LGALS1', 'RPS14', 'CHGB', 'TDRD5', 'CACNA2D2', 'OR5D18', 'RAB4A', 'DHX34', 'LINC00950', 'TRABD2A', 'IKBKE', 'XKR9', 'GSTM2', 'CD320', 'PCAT18', 'SUZ12P1', 'OR2T35', 'TMEM50A', 'RPL23AP7', 'E2F7', 'CASKIN2', 'CYB5D1', 'ST7-OT3', 'KRTAP5-5', 'GNG3', 'GALC', 'EPHB6', 'CAPG', 'RTCA', 'C20ORF24', 'GPHA2', 'ARL14EP', 'LAMTOR3', 'UBE2QL1', 'SCGB1D4', 'ZNF646', 'LINC01550', 'REST', 'FAM182A', 'ADGRF2', 'PLA2G16', 'C21ORF58', 'ITGBL1', 'ZYG11A', 'RSF1', 'CYP4V2', 'FAM86HP', 'TMEM150C', 'RPRD1A', 'CDC27', 'FAM66C', 'IKZF4', 'MGC27382', 'ZNF530', 'SFTPC', 'DNMT1', 'USP17L2', 'ZFP28', 'SMIM7', 'PAN2', 'C19ORF40', 'KIR3DL3', 'FNIP1', 'RAB26', 'FOXI1', 'AIG1', 'HSP90AA1', 'LOC730101', 'IQCA1', 'MAPRE3', 'CYP19A1', 'GBP7', 'CAMKV', 'GPC5', 'ZRANB1', 'CYP2S1', 'AGMO', 'KAT5', 'CDC37L1', 'LHX2', 'NCALD', 'CNGB3', 'KRT38', 'KLHL2', 'RAB25', 'HES4', 'PDE1C', 'RPAP2', 'ZNF692', 'RPA1', 'EFNA4', 'AQP6', 'FAM161A', 'LOC340017', 'BECN1', 'TAS2R4', 'TYMS', 'PCDHB5', 'SLC11A2', 'TDP1', 'PRSS45', 'CDK9', 'ABCB11', 'CYP21A2', 'RAMP3', 'SLC27A4', 'APOC1P1', 'MYO1E', 'WDR90', 'PHLDB3', 'ACRV1', 'MBOAT1', 'TAX1BP1', 'TBC1D26', 'MAGI2', 'BAD', 'CAMK2A', 'PHAX', 'DUSP5', 'IMP3', 'SSTR5', 'LOC100130691', 'COPB2', 'C1QTNF3', 'RBMS2', 'C10ORF105', 'G0S2', 'PPP1R14C', 'FOXO4', 'LAMC3', 'CRYL1', 'GPR32', 'MYO1A', 'KRTCAP3', 'TAGLN2', 'RPS6KA6', 'KRTAP10-1', 'ABCB8', 'KLK1', 'VWC2', 'TMEM214', 'CES4A', 'LOR', 'ARID4B', 'C1QL3', 'LINC01588', 'PRKCI', 'CLDN9', 'RRP1', 'ITGA9', 'ZNF845', 'LRFN4', 'HPS5', 'PLCE1', 'C7ORF60', 'CHCHD4', 'YWHAQ', 'ZNF706', 'CARD6', 'FAM201A', 'TSG1', 'TCEAL1', 'IL23R', 'CNOT3', 'WSCD1', 'MIR99AHG', 'TBL1X', 'C1ORF127', 'SYTL4', 'SSR1', 'C17ORF82', 'SDHC', 'PTRF', 'TMSB15A', 'TEF', 'LINC00479', 'GIMAP2', 'TMEM159', 'TRAM2', 'GNAT1', 'HP', 'FGD4', 'CHST1', 'PMS2P1', 'PRCP', 'AFAP1L1', 'MAST2', 'MSH3', 'ASNA1', 'ZC4H2', 'ENSA', 'PATL1', 'PPWD1', 'DEFB1', 'BRE-AS1', 'ELAVL1', 'SH3RF3', 'SLAMF9', 'NANOG', 'C7ORF57', 'CNIH4', 'LOC391322', 'TCIRG1', 'MAPK4', 'ARGFXP2', 'MAP4K4', 'POM121L8P', 'ACOT11', 'DMRTC1B', 'TAOK1', 'MYPOP', 'AP3M1', 'PLA2G12A', 'LSM1', 'ZNF738', 'ZBTB43', 'HOXD9', 'CIB3', 'ASAP1', 'MMP28', 'GOLGA2P5', 'HMX2', 'KLK8', 'TMEM179B', 'ATP6V1H', 'ARHGAP28', 'CAMSAP1', 'ASPG', 'DPH3', 'LTBR', 'TAF13', 'PRR5L', 'FAM213A', 'RC3H1', 'SOX12', 'ZNF189', 'FBXL5', 'BMS1P5', 'KITLG', 'MIR31HG', 'FAM86EP', 'BRPF3', 'ZDHHC18', 'GMCL1', 'CHN1', 'ANKHD1-EIF4EBP3', 'ACADSB', 'SYT14P1', 'ZBP1', 'CDK12', 'C1QTNF9B-AS1', 'CFHR2', 'DHRS7B', 'ATP5G1', 'PNPLA5', 'B4GALT3', 'KERA', 'CCDC115', 'KRBA1', 'WNT5B', 'SYVN1', 'ATXN3', 'METTL24', 'GTF2I', 'NT5M', 'KIAA1456', 'TBRG4', 'LCE1F', 'UTP14A', 'PEX11B', 'NELFCD', 'PSMA3', 'KIF2A', 'ANO5', 'BRF2', 'TAF1A', 'LINC00442', 'NAA15', 'SLC6A11', 'C2ORF27A', 'PIK3CB', 'SP140', 'SNAR-G1', 'LINS', 'GCHFR', 'FBXO10', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.3115960618728445e-15 NRMSE: 8.432675668744989e-16 MAPE: 3.135269928758871e-12 Pearson Correlation: 0.2322092854855594 Spearman Correlation: 0.21388545991845287 Coefficient of Determination: -12.08211060136564 RMSE: 2.1916708159135347 NRMSE: 0.5514885926155695 MAPE: 1685.9142787028663 Predictor: ElasticNet Pearson Correlation: 0.8548837873809988 Spearman Correlation: 0.8388548794147845 Coefficient of Determination: 0.7094830050501332 RMSE: 0.3663490186837758 NRMSE: 0.09328741786146923 MAPE: 212.42042850545437 Pearson Correlation: 0.39442628234925986 Spearman Correlation: 0.3790246761181561 Coefficient of Determination: 0.08466479239154379 RMSE: 0.5797309680507143 NRMSE: 0.14587729751408227 MAPE: 407.32772441998037 Predictor: RandomForests Pearson Correlation: 0.7116577319940902 Spearman Correlation: 0.6628609993776119 Coefficient of Determination: 0.5011535656010946 RMSE: 0.4800568787719239 NRMSE: 0.1222420816307005 MAPE: 163.29987209275137 Pearson Correlation: 0.3741932206566869 Spearman Correlation: 0.372302977359159 Coefficient of Determination: -0.06807575061840487 RMSE: 0.6262351548992211 NRMSE: 0.15757911348461817 MAPE: 522.8838306805643 Protein: TP53 x_train_column_count: 1002 x_train columns: ['NR1H3', 'UBA7', 'ZKSCAN3', 'METTL5', 'MMP23A', 'RB1CC1', 'GNAS', 'AMFR', 'APOL4', 'KRTAP10-4', 'SPRR2D', 'HIST3H2A', 'TMEM101', 'LOC155060', 'FHL1', 'LENG9', 'TRIM43', 'OR14J1', 'NPPA', 'CYP26A1', 'OPRM1', 'NEUROG2', 'HDAC4', 'CDRT15', 'PBOV1', 'SNORA24', 'SH3GL3', 'ARAF', 'ICAM2', 'MYOG', 'HSF4', 'GMNN', 'IPPK', 'PCGF6', 'NEMF', 'NACAP1', 'TCP11', 'SMAD3', 'CCBL2', 'GNLY', 'TNFRSF21', 'CCL2', 'COL3A1', 'USP49', 'GNB1', 'DGKH', 'POFUT2', 'SLC10A7', 'SPTBN2', 'OSBPL5', 'NPY', 'ADAMTS12', 'IL21', 'RPS19BP1', 'C6ORF201', 'PAIP2B', 'HDLBP', 'MOAP1', 'SGK223', 'SHISA9', 'TRMT10A', 'MZT1', 'CPT1B', 'LYPD2', 'CFAP43', 'SMUG1', 'RPL22L1', 'ENDOU', 'MCF2L2', 'GPNMB', 'TAS2R7', 'ADAMTSL1', 'MAT1A', 'MYH13', 'TDRD6', 'FAM167B', 'CTSO', 'CIAO1', 'C5ORF45', 'USF2', 'FBXL20', 'ANKRD29', 'ATP6AP1', 'CCDC172', 'RPS6KB1', 'PPP1R2P9', 'POU2F1', 'BTG3', 'CWF19L1', 'HHEX', 'ABCC6P2', 'MTF1', 'SPANXC', 'IL13RA1', 'LELP1', 'PPP1R42', 'SDHAF4', 'ILKAP', 'KATNB1', 'C15ORF27', 'MTERF4', 'FKTN', 'MVB12B', 'TNFAIP3', 'DPM1', 'SFRP2', 'PRRT2', 'RAP1A', 'RHOC', 'FAM153A', 'OCIAD1', 'BACE2', 'LILRA5', 'LRRC59', 'P2RY10', 'MAGED2', 'CSNK1E', 'C11ORF52', 'HSD17B14', 'PLK1', 'RNF212', 'ZNF282', 'CHP2', 'ASB12', 'ZFP37', 'LTK', 'MPP5', 'EML4', 'AWAT1', 'SPAG17', 'RNF170', 'QRFPR', 'TEDDM1', 'SNED1', 'CSMD1', 'USP27X', 'PRKAG2', 'LINC01366', 'KLRB1', 'TTTY8', 'MSLN', 'PLK2', 'OR4K13', 'PCNX', 'CYP51A1', 'POLK', 'OR8K5', 'GFAP', 'LOC728743', 'SPATA21', 'TRAIP', 'DCK', 'GPR143', 'LCOR', 'KCNH3', 'VSX1', 'TNN', 'FSTL3', 'AMELY', 'TTTY10', 'AGBL5', 'TAS2R46', 'TMEM200A', 'EYA4', 'MYO9A', 'MRPS2', 'USP51', 'KRTAP12-1', 'LOC152225', 'PRAC1', 'OCA2', 'RNF217', 'PLET1', 'LRRC23', 'CAP1', 'TP53I11', 'AKT3', 'PECR', 'IL18R1', 'TMEM249', 'ZC3H12B', 'STARD5', 'ICOS', 'TOP2B', 'ATP2B2', 'ACOT1', 'ATP5E', 'SLC22A10', 'SRP14', 'CDH26', 'TMBIM6', 'RPA3', 'CACNG5', 'ARL4C', 'ERCC4', 'UST', 'LOC284788', 'STAG1', 'UCKL1', 'ZMYND11', 'KRTAP9-2', 'PDE6A', 'LOC340017', 'EPB41', 'OR12D2', 'ASB16', 'FDCSP', 'CWC27', 'HAS2-AS1', 'VAPA', 'FN1', 'TRAPPC9', 'LINC00964', 'C17ORF82', 'GOLGA6L10', 'ANKRD1', 'RAB22A', 'MIB2', 'LINC01300', 'SFXN2', 'PIN4', 'NOVA1', 'NPHS1', 'KRTAP12-2', 'RASGRP3', 'GSTA5', 'STK4', 'TRPS1', 'DUSP22', 'DKK4', 'SMIM4', 'MEIS1', 'MT1L', 'NT5C', 'NXPH1', 'CMTM6', 'TPRX1', 'ACAD8', 'CASP6', 'ACTN3', 'TBC1D2B', 'TCEANC', 'TUBA3D', 'TBX15', 'OGFRL1', 'TAX1BP3', 'EOMES', 'MKL1', 'RPL13AP17', 'ACVR1B', 'FAM157A', 'PTPRD', 'DENND4A', 'SLC11A2', 'SLC22A1', 'ZNF343', 'UBR7', 'ADGRE4P', 'NABP1', 'PXMP4', 'PAPD5', 'NFYA', 'PPP3CB', 'TMEM2', 'WNK4', 'ABCC11', 'MTG2', 'JAKMIP1', 'S1PR3', 'MCAM', 'UCP3', 'RND3', 'CIRBP-AS1', 'HNRNPDL', 'TDH', 'NOTCH2NL', 'LRP8', 'PRR5L', 'TTC3', 'NBEAP1', 'ISG15', 'CLN5', 'SLC27A1', 'ITGAM', 'SYCE1L', 'PELI3', 'CTXN2', 'THRSP', 'CXCL3', 'MGAM2', 'MYNN', 'FAM3A', 'LYPLA2P1', 'FBXL8', 'SH3TC2', 'COX10', 'ELOF1', 'NKAIN2', 'DCAF7', 'OR2S2', 'CYSRT1', 'ZNF615', 'RECQL4', 'KIAA1755', 'RNF180', 'RAB29', 'DDIT4L', 'STAT6', 'UTS2R', 'ADCY8', 'TCP11L2', 'HEYL', 'DKK1', 'SPTLC1', 'SPRED2', 'CHRNG', 'RALGPS2', 'MBNL1-AS1', 'TWF2', 'SPTB', 'LAD1', 'WEE1', 'UBE4A', 'ST3GAL6', 'ATP6V1E2', 'IFNLR1', 'CCDC28B', 'EIF3I', 'LOC284578', 'HSPA9', 'PGD', 'SLAMF1', 'IMPG1', 'FN3KRP', 'SMC4', 'MSL3P1', 'CAMK2N2', 'KIAA0040', 'SNORA77', 'DGKG', 'AFM', 'ZFAT-AS1', 'SIGLEC17P', 'HSD3B7', 'AQP12A', 'CSE1L', 'MAFB', 'ZNF121', 'HDAC1', 'RASGEF1B', 'ALK', 'SPINK1', 'ARHGEF7', 'BSG', 'IMPA1', 'SMPD1', 'PPP1R1C', 'RPL27A', 'ADGRF2', 'ADARB1', 'FGF13', 'PKIA', 'GPR141', 'ZSWIM6', 'BCL9', 'ELL2', 'SPATA32', 'AKR7A3', 'BRD8', 'GET4', 'SAMD4A', 'PPP1R18', 'LRRC18', 'ATP10D', 'CEP76', 'CD22', 'FRG2DP', 'MEGF6', 'KRTAP12-4', 'LOC541473', 'VIM', 'SPEM1', 'SEMA4B', 'ETF1', 'RBM26', 'SKP2', 'BLOC1S4', 'CYP4F8', 'ITPR2', 'PMF1', 'ASB3', 'URAHP', 'C12ORF54', 'KRT6A', 'TRPC6', 'FUBP1', 'SCYL2', 'NANOS3', 'HAND2-AS1', 'ACER1', 'GOLGA2P5', 'DNASE1L3', 'TSC1', 'RAG2', 'NAB1', 'KCTD18', 'HMMR', 'ZBTB26', 'PTENP1', 'SPINK9', 'MIR99AHG', 'KLHL3', 'C9', 'RAB8B', 'ZNF430', 'GABRE', 'DPPA3', 'TBC1D15', 'PIRT', 'NPPB', 'NPNT', 'SNRNP70', 'NKAP', 'PRMT7', 'LY96', 'CDC14A', 'TMPO', 'LOC100134868', 'MX1', 'FDXR', 'CUL5', 'HIST1H2AK', 'DRD5', 'SH3BGRL3', 'LY6D', 'RAPGEF2', 'APCS', 'MAPT', 'DUSP7', 'LINGO1', 'OSGEPL1', 'HSPA1B', 'TP73-AS1', 'RHOA', 'DNAJC25', 'TINAGL1', 'DOCK6', 'GGA2', 'EXO5', 'YARS', 'RHBG', 'CEACAM21', 'PHF2', 'ECHDC1', 'GPATCH11', 'HOOK2', 'TRIM7', 'PRRG3', 'TBC1D9B', 'FRS3', 'AGTRAP', 'ACTL9', 'CC2D2A', 'USO1', 'SLC25A31', 'MYOCD', 'SCN1B', 'OCLM', 'YY1AP1', 'PDCD2L', 'NXF1', 'FLJ37201', 'MIR7-3HG', 'RBM10', 'ITGAE', 'APOPT1', 'PREB', 'CBX4', 'P3H2', 'CPED1', 'ZNF43', 'KIAA0430', 'TSGA13', 'CKLF', 'IFI30', 'OLFM3', 'DCSTAMP', 'MGAT5B', 'PIH1D1', 'EDC3', 'ZMAT1', 'TBL1X', 'TEF', 'KIAA1715', 'OR5M1', 'FAM102A', 'CENPQ', 'LINC00092', 'RAI1', 'GABRA1', 'CMPK1', 'KRT9', 'OR6C70', 'ABCA5', 'C8ORF34', 'SGCD', 'TESK1', 'ODF4', 'SLC7A8', 'DAXX', 'ADGRG3', 'MUS81', 'NLGN4X', 'DMRTC2', 'RABL2B', 'SATB2', 'PKD2', 'FHDC1', 'WBSCR16', 'ANKRD20A3', 'LOC344967', 'CLPSL2', 'IGSF1', 'GPD1L', 'HACL1', 'KCNJ5', 'ATP12A', 'UGT2A1', 'PSMG3', 'PGPEP1L', 'QTRT1', 'STUB1', 'PSEN2', 'PHF23', 'CPOX', 'WASF2', 'ING1', 'DDX17', 'LUZP6', 'TMEM106A', 'C21ORF2', 'SMAD6', 'NID2', 'RPS2', 'HEBP1', 'CSF1', 'CD84', 'SLC4A2', 'KATNAL2', 'FMO3', 'CALD1', 'KLK10', 'NDUFB10', 'PIN1P1', 'NLRP12', 'FAM173B', 'USP28', 'HSPA12B', 'TRPM7', 'SAMM50', 'MT2A', 'FOXP1', 'FOLR1', 'GPR135', 'RNASE1', 'RAB2B', 'ZNF143', 'ARSG', 'ZNF490', 'EMILIN1', 'SERPINB8', 'RGS22', 'GOLGA7B', 'KIAA1024', 'XCL1', 'STT3B', 'WDR89', 'POLR3F', 'FAM133A', 'CBX6', 'STAG2', 'DIRAS2', 'LINC00937', 'EXTL3', 'C4ORF46', 'GDF2', 'RNF128', 'TNFRSF8', 'STK38', 'ZNF589', 'C2ORF15', 'COMMD2', 'FAM27C', 'KCNT2', 'BPIFC', 'CDRT4', 'ARL13B', 'BAIAP2-AS1', 'CD19', 'OR52K2', 'B3GALNT1', 'KRTAP10-5', 'CH25H', 'APBA2', 'MCF2L', 'ELL3', 'ZNF35', 'RPS6', 'OR2D2', 'KCTD2', 'PLXND1', 'SCML2', 'HDAC3', 'RAB11FIP3', 'MARS', 'SNORA71E', 'METTL21C', 'TK2', 'LINC01098', 'CCL24', 'APPL2', 'PSMC3', 'AFP', 'ARNT2', 'MIR1-1HG', 'CCDC116', 'KDM4A', 'ASIC4', 'SELT', 'ZBTB45', 'SPG7', 'OR6T1', 'SKA3', 'ZNF485', 'TLX1NB', 'TMEM62', 'LINC00662', 'HOMER2', 'PPIC', 'PRELP', 'C1GALT1C1L', 'DPH5', 'TPTE2P6', 'HIST4H4', 'UNC13B', 'RHOB', 'LSR', 'ARHGAP5', 'TMEM216', 'SLC2A6', 'TAS2R5', 'SLC35A5', 'DEFB136', 'MESP1', 'SECISBP2L', 'TMEM200B', 'ZNF157', 'MRPS15', 'SFTPA1', 'ZNF529', 'GOLGA6C', 'C11ORF70', 'CRTAP', 'SMARCC1', 'THYN1', 'ZP1', 'SFTPA2', 'SLC39A7', 'DCP1A', 'PP7080', 'TMIGD2', 'ZSCAN22', 'CHST13', 'KLF10', 'ISM1', 'RARRES3', 'LAX1', 'ACHE', 'NRAS', 'NR1D2', 'SRPX2', 'GABRA3', 'ADGRA2', 'C1ORF64', 'RGS20', 'CT45A4', 'KLF2', 'RPUSD3', 'CXXC4', 'HSPH1', 'GRIA1', 'SZT2', 'PIKFYVE', 'ELMO1', 'RPS27', 'KCNK18', 'CNOT6', 'F8A1', 'CTU2', 'LIPE', 'SFTPB', 'LINC00596', 'NAA35', 'TMEM9', 'EGFR', 'NUCKS1', 'COLCA1', 'PUS10', 'TMPRSS11D', 'WWOX', 'PAXIP1-AS1', 'C11ORF57', 'ESYT2', 'SPARC', 'ELAVL2', 'METTL9', 'ACAP3', 'RASSF2', 'TRIM24', 'TBP', 'SLC25A40', 'CSF3R', 'CFAP74', 'KRTAP10-12', 'S100A12', 'PELI1', 'ASIC3', 'LINC01588', 'ALX1', 'C21ORF33', 'LINC00162', 'NR3C2', 'MC1R', 'HLA-E', 'ARL6IP6', 'HTR1F', 'TYMS', 'IFT46', 'GPRC6A', 'SERTM1', 'CRIPT', 'MIPEP', 'ASB7', 'LINC01102', 'NEK3', 'FLT3LG', 'PLLP', 'DSCR10', 'KRTAP21-1', 'HGS', 'ETFDH', 'NCBP1', 'OR5AS1', 'PSMA2', 'CECR5-AS1', 'PROKR1', 'NFIA', 'GNGT1', 'DMXL2', 'FAM9A', 'ICA1L', 'LDLRAP1', 'GLYATL3', 'TMEM259', 'PSD', 'DCLRE1B', 'SDHAP2', 'SLC41A3', 'JARID2', 'SLC25A11', 'KIF5A', 'HDX', 'NUAK2', 'EBAG9', 'MESP2', 'SLC15A4', 'XYLT2', 'PKP2', 'ABCD1', 'MR1', 'ST7-OT4', 'BACH2', 'KLHL23', 'LOC644936', 'CD1A', 'PRAME', 'MGAT4C', 'GNA12', 'OSBPL7', 'SMCR8', 'TST', 'SPANXN1', 'FAM167A-AS1', 'MFHAS1', 'HIST1H3J', 'ZNF232', 'CDKN2A-AS1', 'SEC23IP', 'DGKE', 'EPHA1', 'FOLR3', 'GATC', 'ACSF3', 'RPL23', 'FCRL3', 'FBXO42', 'RAD21', 'LOC285074', 'ARHGAP11A', 'C1QTNF4', 'MAGEB2', 'NEUROD2', 'AKR1D1', 'SYT11', 'SOX21', 'TRIM2', 'TPD52L2', 'ASH1L', 'ATIC', 'B3GALNT2', 'HSD17B7P2', 'PIK3CB', 'CYP19A1', 'EME1', 'MOK', 'SLC6A20', 'ZNF443', 'STX6', 'OR10C1', 'UIMC1', 'HPCAL4', 'FZD4', 'ACTC1', 'TRIML1', 'UBASH3B', 'ZYG11B', 'ANP32C', 'CDC34', 'IYD', 'GSTM2', 'SIX6', 'ANKFN1', 'EZH1', 'C11ORF1', 'PKP3', 'SNAR-C4', 'CLPS', 'GUCY1A3', 'ZNF845', 'ARFGEF3', 'NFKB2', 'ZNF71', 'GNAL', 'ARGFX', 'TECTA', 'IKBKB', 'WDR37', 'TCTEX1D4', 'FEZF1', 'FBXO15', 'ZBTB22', 'LRRN3', 'KRTAP2-1', 'OSTM1', 'BNIP2', 'SLC27A6', 'KMT2B', 'ANP32AP1', 'EPYC', 'COL9A2', 'NSMCE4A', 'PIGF', 'HSPD1', 'RGCC', 'PSMA5', 'SOX2', 'MKLN1', 'ZNF264', 'CNTFR-AS1', 'C16ORF58', 'ADGRA3', 'FAM183CP', 'IFRD1', 'TAS2R30', 'JHDM1D-AS1', 'POLE', 'KDELR2', 'ZNF321P', 'MSN', 'DGUOK', 'NIF3L1', 'LVRN', 'IFRD2', 'FAS', 'HIST1H4F', 'IL1R2', 'KLF7', 'CRHBP', 'PLP1', 'ARID3B', 'NIP7', 'TFR2', 'FAM104A', 'LINC00950', 'NSUN7', 'IQCJ', 'B4GALT7', 'GLUD2', 'TBX22', 'FKBP9', 'C9ORF43', 'ZNF138', 'GMIP', 'KLHL15', 'ARAP3', 'JAZF1', 'SALL3', 'SASH3', 'AVPR1B', 'CSRNP1', 'GCSAM', 'POLD4', 'SF3B3', 'ELK3', 'ELAVL4', 'NCSTN', 'UNC5D', 'YIPF6', 'OR51G1', 'CPSF3L', 'RUSC1-AS1', 'C19ORF44', 'CIDEB', 'TMEM160', 'GNG3', 'TGM7', 'SSR3', 'DZIP1', 'RCBTB2', 'SLC26A1', 'PPM1B', 'DERL2', 'PRSS37', 'EXOSC8', 'PRPF38A', 'ELF1', 'SNORD22', 'SNORA5A', 'HSD11B1L', 'NOL8', 'LMBR1L', 'DSG2', 'LYL1', 'PIPSL', 'MACROD2', 'CEP97', 'GAS8', 'TCF7', 'CORO1A', 'PRR16', 'TMX1', 'POLR2M', 'NDUFA13', 'PIP5KL1', 'CD4', 'DNAAF3', 'NUDT6', 'C7ORF73', 'PRR23C', 'H3F3B', 'CCBL1', 'EXOC3L1', 'SETDB2', 'FAM214A', 'OR51F1', 'RHOBTB2', 'SEC23B', 'MAP1LC3B2', 'IL3RA', 'CCL16', 'TFB1M', 'WASF1', 'FAM71F1', 'WDR18', 'PPP1CA', 'B3GAT3', 'CLEC4D', 'CRY2', 'RNLS', 'PCDHA12', 'C17ORF59', 'TEFM', 'ERRFI1', 'ZNF781', 'AJUBA', 'ZNF815P', 'SFMBT1', 'SLC25A6', 'SERP2', 'LOC100192426', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.5611971584937692e-15 NRMSE: 3.9705922289319907e-16 MAPE: 3.905405308132864e-12 Pearson Correlation: 0.310166090555308 Spearman Correlation: 0.20775072008379158 Coefficient of Determination: -0.7573615330810652 RMSE: 0.7001391785281127 NRMSE: 0.18752890813663123 MAPE: 432.00275670081004 Predictor: ElasticNet Pearson Correlation: 0.8261251770210795 Spearman Correlation: 0.7635896414144603 Coefficient of Determination: 0.6456591075685192 RMSE: 0.2522692691735913 NRMSE: 0.06415963508064583 MAPE: 435.8184938544958 Pearson Correlation: 0.5415584087939384 Spearman Correlation: 0.42840683799049867 Coefficient of Determination: 0.27980233908359753 RMSE: 0.44820807436557625 NRMSE: 0.12005037481333233 MAPE: 184.40923882552022 Predictor: RandomForests Pearson Correlation: 0.6569589679112537 Spearman Correlation: 0.5775406552404516 Coefficient of Determination: 0.3645826765007977 RMSE: 0.33781835062473564 NRMSE: 0.08591733020288808 MAPE: 729.0590125273629 Pearson Correlation: 0.5433669438987535 Spearman Correlation: 0.4512998915198444 Coefficient of Determination: 0.2408075230772433 RMSE: 0.46018215195900664 NRMSE: 0.12325757384733002 MAPE: 168.92432368594328 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['SMPDL3B', 'INHBC', 'LIPK', 'TOMM70A', 'GAB3', 'CGNL1', 'ARGFXP2', 'CMTM6', 'TFB2M', 'SPINK13', 'KCNJ1', 'GEM', 'TMEM39B', 'ZNF24', 'ERBB4', 'PZP', 'OLMALINC', 'THBS4', 'PNO1', 'FBXL13', 'MGC16275', 'TSGA10IP', 'EFCAB1', 'EIF2B1', 'DDX31', 'ANTXR1', 'TBX5', 'DLC1', 'STXBP1', 'ATP5G2', 'TCEANC2', 'POLA1', 'PDXDC2P', 'ZFHX4-AS1', 'USP37', 'FKBP2', 'CSNK1G2', 'PRSS3P2', 'DGKI', 'FOLR1', 'TMEM57', 'VENTX', 'USP25', 'SRRD', 'PRDM13', 'EPHB4', 'SPOCK1', 'SGCB', 'ZIM2', 'SLC39A11', 'ZNF224', 'INSRR', 'CARNS1', 'CHD6', 'EPS15', 'LAPTM5', 'XRCC6P5', 'CCNYL1', 'FAM43A', 'PQLC2L', 'DOHH', 'CCT6B', 'TRIM22', 'PLCB3', 'GLYR1', 'SMEK3P', 'MCCC1', 'SFSWAP', 'FGFR1', 'SLC20A1', 'LRRC39', 'PCDH9', 'KBTBD7', 'QSER1', 'ZSCAN20', 'DEFB126', 'ATG3', 'FAM76B', 'THAP2', 'OR52N1', 'MTR', 'SDC1', 'SLC7A8', 'SSMEM1', 'NR5A1', 'UBXN2A', 'KCNIP1', 'ATP8B1', 'PMVK', 'TXNL4B', 'ZDHHC4', 'HOXA4', 'SMAD6', 'CTSC', 'GPR75', 'MTERF3', 'TVP23A', 'ASH2L', 'WNT10B', 'GAS7', 'C18ORF42', 'GPR137C', 'QTRTD1', 'LOC728392', 'GORASP1', 'SOGA3', 'SCYL3', 'RCE1', 'EFEMP2', 'WEE2-AS1', 'ALG5', 'MRC1', 'POLE', 'USP39', 'MS4A8', 'RAB3D', 'BNIP3L', 'SUPT5H', 'PNMAL2', 'CAD', 'ANKRD45', 'PCAT18', 'FOXN4', 'NCDN', 'PMCH', 'C8B', 'TM9SF4', 'NAP1L6', 'NR5A2', 'CEP112', 'ADCK5', 'MND1', 'C9ORF129', 'TMPRSS9', 'OR1M1', 'MOB3B', 'C3ORF67', 'ZNF449', 'GBP7', 'LRR1', 'DYM', 'FBXO43', 'HSD17B10', 'REV3L', 'ZNF256', 'WNK1', 'IQGAP2', 'EGFL7', 'OR9Q1', 'C20ORF195', 'SFRP5', 'AP4S1', 'ZNF322P1', 'KRTAP21-1', 'RBM14', 'PAH', 'SELENBP1', 'PARD6G-AS1', 'CRISP2', 'GOLGA6B', 'CUEDC2', 'CTBP2', 'INSC', 'COMMD5', 'FAM185A', 'CAPN11', 'MRPS16', 'NEUROG3', 'HLA-DOB', 'ARID4A', 'PSMD12', 'ERF', 'LRRC15', 'DEGS2', 'CDK1', 'HJURP', 'CYBA', 'CYTL1', 'ABCC8', 'TMED6', 'WDR55', 'CCDC110', 'TPSAB1', 'KCTD11', 'PLCXD3', 'OR10S1', 'CHRNB3', 'LEFTY2', 'TNFRSF10B', 'LZTFL1', 'MFSD2B', 'FAM58A', 'ZNF853', 'MAP3K14-AS1', 'PI4KAP1', 'NUP155', 'TIMM22', 'TAS2R30', 'TMF1', 'MCEE', 'PRMT1', 'PRG3', 'ZNF493', 'WLS', 'PRR18', 'ASB12', 'MYL6', 'FAM71E2', 'SMC1A', 'VGF', 'JAKMIP3', 'ZSCAN26', 'TRMT44', 'PHPT1', 'GFRAL', 'TMEM181', 'C14ORF93', 'CAMKMT', 'ABT1', 'KCNRG', 'SYNJ2', 'KRTCAP2', 'LOH12CR1', 'AAED1', 'ATP5C1', 'HABP2', 'LMNTD2', 'RNF186', 'MYO1E', 'MBD5', 'LINC00922', 'SNRNP35', 'CD160', 'RPLP1', 'EFNB2', 'OSMR', 'TRIM29', 'NELFB', 'PRSS12', 'PTCHD3', 'LEO1', 'C22ORF34', 'SERPINB1', 'NAV2', 'FXR2', 'ATM', 'PROSER2', 'LHCGR', 'PALMD', 'TRIM60', 'ARHGDIB', 'STARD6', 'KRTAP10-6', 'IFT43', 'POLR3K', 'MAP3K15', 'LINC00189', 'NUDT1', 'NSUN5', 'CLEC1B', 'NAGLU', 'FAM149A', 'IGIP', 'PDLIM3', 'MAPKAPK3', 'C4ORF45', 'L1CAM', 'HIST1H2AA', 'HIST1H1C', 'C9ORF114', 'CAMKK1', 'MEF2BNB-MEF2B', 'VENTXP7', 'NDUFB4', 'IL12A', 'SAMD1', 'KATNAL2', 'GCLC', 'LINC00294', 'ING3', 'G6PC3', 'CFI', 'DHRS7', 'TRIM75P', 'CDH11', 'RELT', 'LOC285847', 'MMP28', 'RPL13P5', 'TOMM7', 'CCNY', 'HAND1', 'CELP', 'RNASE13', 'AMN1', 'KDR', 'CTPS1', 'CPA5', 'MED10', 'MLIP', 'TRABD2A', 'NOP16', 'IVNS1ABP', 'EIF4G3', 'INAFM1', 'NINL', 'RPS3', 'NUTM2A-AS1', 'RABAC1', 'EMX1', 'KLK4', 'KCNG3', 'IFNW1', 'PART1', 'GABRE', 'ADGRD1', 'GGA1', 'SLC26A1', 'MOV10', 'SPTBN4', 'TMEM127', 'SNORA44', 'RNF145', 'TMEM169', 'CT47B1', 'B2M', 'NEK3', 'PAAF1', 'SMG1P3', 'AGRP', 'ZNF561', 'IKBKB', 'C19ORF33', 'CCDC66', 'DDX24', 'ANKRD44', 'F2RL3', 'DMXL1', 'MDN1', 'LOC553137', 'VPS41', 'CEACAM22P', 'AARSD1', 'PRKCDBP', 'DNAJC17', 'AHNAK2', 'KIAA2013', 'ZNF345', 'HHIPL2', 'ITGB1BP1', 'BAIAP2-AS1', 'USP33', 'SEC24C', 'HDAC8', 'OR7G2', 'KCNIP2', 'CRAT', 'SLC2A4RG', 'TMEM140', 'ANKEF1', 'SNX10', 'SLC2A5', 'KIF3B', 'KCNK9', 'CCDC67', 'ALDH1A2', 'RETN', 'RAB2B', 'AGBL3', 'SDR39U1', 'CEP57', 'A2M-AS1', 'BUD13', 'SOX2-OT', 'WFDC9', 'MAML1', 'NTRK1', 'CACHD1', 'ARPC3', 'ZNF429', 'ZNF841', 'TPK1', 'FNDC3A', 'CDH10', 'PNLIPRP2', 'AQP8', 'PROSER1', 'SWI5', 'SLC38A3', 'TWF2', 'GOLGA2P5', 'ABCA13', 'WDFY2', 'FAM71E1', 'ANO8', 'ATP5G1', 'NDUFB1', 'UNC5C', 'MAGI1', 'LINC00602', 'FAM90A7P', 'SLC25A2', 'SAMM50', 'TMEM248', 'TBC1D16', 'HS6ST3', 'MCMBP', 'LILRA6', 'SHISA6', 'LAMTOR3', 'CIPC', 'COPE', 'ARID2', 'TUBA3E', 'KLHL35', 'ASB17', 'SLC45A3', 'ZNF699', 'ARHGEF25', 'CSTF2T', 'ZNF138', 'PTDSS2', 'ZNF101', 'C22ORF15', 'GPR171', 'SEPT2', 'ADAL', 'CCDC169', 'MTVR2', 'LRP12', 'NELL1', 'PARG', 'BRDT', 'SNAPC5', 'PAFAH1B3', 'LRRC32', 'SPANXN1', 'CHST3', 'MARCH5', 'DUSP7', 'CLDN7', 'ATP5L', 'PAX2', 'KRTAP10-9', 'RAD51D', 'SLTM', 'B4GALT6', 'PRAF2', 'GRXCR2', 'ANKRD55', 'FICD', 'VAMP3', 'PRKAR2A', 'PFAS', 'HLA-DRB5', 'PIR', 'ZNF426', 'EPN1', 'WNT7A', 'LY6G6E', 'FEZF2', 'USP3', 'SHROOM2', 'MRPL42', 'NEUROD1', 'CYP4F2', 'OR6C75', 'ZMAT4', 'CCDC171', 'LBX2-AS1', 'BCL2L2', 'KCNN1', 'THAP5', 'DIAPH2', 'PLTP', 'LINC01144', 'KLHDC9', 'PNMAL1', 'AMMECR1L', 'SEPT4', 'PCDH20', 'CBLN4', 'ICMT', 'AGAP3', 'KRTAP27-1', 'TMEM42', 'OR4F17', 'HLA-DQA1', 'TH', 'DCAF11', 'SPHK2', 'CXADRP3', 'FOXO1', 'CELA1', 'SNORA70B', 'MED7', 'SERPINB5', 'ADAMTSL3', 'CGB2', 'CNST', 'HSF2', 'CAPSL', 'C19ORF66', 'TMEM138', 'ANKRD33', 'USP5', 'ABCA2', 'TIMM10', 'EMC8', 'MARCKS', 'SRXN1', 'INPPL1', 'MBLAC1', 'LAS1L', 'SNX2', 'TDH', 'SBNO1', 'RNF13', 'TEX29', 'TTLL5', 'GMPR', 'DHDDS', 'ARHGAP9', 'BAGE2', 'PYROXD1', 'PIGC', 'MPLKIP', 'CECR1', 'C17ORF75', 'ISLR', 'NOMO3', 'S1PR2', 'COG5', 'CNIH2', 'SETD8', 'NR4A1', 'P2RY12', 'PAK2', 'CT47A11', 'PRPS1L1', 'PHLPP2', 'DMGDH', 'HBG2', 'LGI4', 'OR10T2', 'CD1B', 'TAC3', 'SNORA20', 'TRAP1', 'ZBTB41', 'GPD2', 'RRN3P3', 'PTPRK', 'COPA', 'FOXD4L3', 'RAB4A', 'ANKRD34A', 'ADGRG2', 'ZNF346', 'TYW3', 'APOA1', 'ZMYND19', 'TFAP2A', 'NCF4', 'HIST2H2AB', 'TMEM254', 'HAUS4', 'MLYCD', 'TNFRSF1A', 'SMG5', 'MKRN2', 'OVGP1', 'FDCSP', 'POLR2J4', 'MGME1', 'HDAC6', 'HTR4', 'FAM195A', 'SIKE1', 'KRTDAP', 'RAB37', 'UGGT1', 'AOC3', 'ECI2', 'TRIM44', 'CEP170B', 'ITIH6', 'ADRA2A', 'LOC389033', 'EDNRA', 'HNRNPL', 'EI24', 'EMC6', 'NCOA5', 'NAA40', 'PERM1', 'VWA5B2', 'RBP7', 'DENND6B', 'MYL9', 'DXO', 'NOG', 'ZCRB1', 'TLK2', 'LYSMD3', 'MCHR2', 'ENOSF1', 'TPGS1', 'HSD52', 'ANP32A', 'TNFAIP6', 'HIC1', 'KIFC1', 'MS4A5', 'MAOA', 'HHATL', 'OSBPL6', 'SEC11C', 'TBL1XR1', 'POM121L12', 'ARID3A', 'ECHS1', 'FAM90A1', 'ARHGAP32', 'C6ORF106', 'TMEM200B', 'TRIM66', 'PDCD2L', 'NFASC', 'INO80B', 'FAM71B', 'MAP2K1', 'DSPP', 'KLHDC7A', 'SNORA24', 'UBQLN4', 'OTUB1', 'DUS1L', 'LHFPL2', 'SLC7A5', 'STX3', 'RAB3IL1', 'ATG10', 'SEC61A1', 'SLCO4C1', 'ERO1LB', 'RARG', 'KLHL7', 'ZNF252P-AS1', 'MAGT1', 'JAG2', 'HTRA2', 'LYN', 'PCNA', 'COA5', 'RAD18', 'LOC286359', 'PSIP1', 'HCG11', 'NDUFB2-AS1', 'GYPE', 'MFI2', 'CKAP2L', 'SLC7A13', 'NDUFS3', 'WFDC2', 'MFSD7', 'SLC9C1', 'KLHL28', 'ZNF792', 'CXCL9', 'FDX1L', 'PDHA2', 'NR1I3', 'TM9SF3', 'BAD', 'FAS', 'KLHL34', 'TAB2', 'SH3GL3', 'SLC25A3P1', 'CFAP57', 'ZNF572', 'WBSCR22', 'CROT', 'CYP2C9', 'PPP2R1B', 'PJA2', 'LINC00705', 'NUTM2A', 'OXGR1', 'PCDHB10', 'NUMB', 'PLCG2', 'ABCB5', 'NEUROG2', 'TINF2', 'DPY19L2P1', 'SLC35G3', 'HTR3A', 'CLIP4', 'RGS16', 'GDPGP1', 'ZSCAN16', 'LOC400043', 'APRT', 'ADAD2', 'C20ORF85', 'PVT1', 'CSTF2', 'FGR', 'EBF1', 'BET1P1', 'ZNF826P', 'OR51V1', 'GIMAP1', 'UNC119B', 'METRNL', 'SMARCA2', 'USP28', 'RNF44', 'B4GALT1', 'GMFB', 'RDH16', 'SLC5A6', 'DPCD', 'MICU2', 'TRAF3IP3', 'MYBL2', 'TMCO3', 'TCF20', 'KCNK15', 'SYT8', 'RASA4CP', 'CRYZL1', 'ATP8B4', 'AIDA', 'STRN', 'HGS', 'ADGRB1', 'MUC7', 'TERC', 'NKX1-2', 'CKMT2', 'KIAA1804', 'PMS2', 'MADD', 'HSD17B3', 'SLC25A15', 'H2AFX', 'DGCR5', 'DHRSX', 'TMEM14E', 'XYLT1', 'CCNO', 'MEF2C', 'TMEM216', 'SAC3D1', 'CLPSL2', 'PTPDC1', 'NF1P2', 'FOXA3', 'MEF2A', 'CHCHD7', 'NPDC1', 'LINGO3', 'POLD2', 'LGI2', 'OMP', 'KCNB1', 'RBM10', 'BBX', 'OR2A9P', 'SLC25A3', 'SUMO2', 'AR', 'GMPS', 'FGA', 'COL18A1', 'OGFOD1', 'ACSL6', 'SNORA80A', 'ZSWIM4', 'SLC19A1', 'FBXL5', 'SIGLEC15', 'TBC1D8', 'AASDH', 'SSBP2', 'FOXQ1', 'NUBP2', 'SLC22A18', 'GLRX', 'ZNF500', 'CCDC127', 'SPATA45', 'IGSF22', 'CCDC120', 'ST3GAL4', 'DHRS12', 'LOC100287704', 'LLGL2', 'ZDBF2', 'RNF7', 'CLSTN2', 'ATL2', 'PDZD4', 'PBDC1', 'ZNF805', 'CNGB1', 'TMEM200C', 'CYP27B1', 'CINP', 'INO80C', 'SNTB2', 'PORCN', 'OR8B12', 'LOC641367', 'TISP43', 'SNORA15', 'DMP1', 'CASC2', 'DSCR4', 'MARVELD2', 'R3HDM4', 'LOC100130417', 'ZBTB5', 'GPRC5B', 'IFNGR2', 'B3GALT5-AS1', 'KRT31', 'C2ORF81', 'CLCC1', 'ADAM3A', 'CTSL', 'MOGAT3', 'ALPP', 'CNTN6', 'TMEM190', 'LINC00235', 'SNAR-A13', 'CREG1', 'QDPR', 'MRPL32', 'USP6NL', 'MARC2', 'UGT1A1', 'ZFY', 'ARHGAP15', 'PARP10', 'TSHZ1', 'TMEM41B', 'C1RL', 'C9ORF135', 'BST1', 'DEK', 'CDCA3', 'SNX1', 'N4BP2', 'KCNMB1', 'FGF7', 'ZNF707', 'FAM122A', 'FERMT2', 'ZNF286B', 'C12ORF77', 'USP24', 'ELAVL3', 'MCRS1', 'CCDC54', 'MRPL15', 'CCND3', 'SNURF', 'NDUFV3', 'RADIL', 'HYPM', 'NSFL1C', 'STK36', 'OR5L2', 'RAB40AL', 'FUCA1', 'SRP19', 'KIAA0040', 'FCRL1', 'SLC31A1', 'PLP2', 'SP5', 'DEFB128', 'USF1', 'POLR2K', 'RPL39', 'IP6K1', 'P3H1', 'BRAP', 'SLC9A7', 'KNSTRN', 'FAM110B', 'GFM2', 'NXF4', 'LOC143188', 'PCDHA5', 'FIBCD1', 'GLUD2', 'NFAT5', 'SNORD8', 'TMEM37', 'PAIP1', 'C10ORF11', 'GOT2', 'MORC1', 'ARL13A', 'TMEM63B', 'MRPL37', 'LIPI', 'SLC25A53', 'C2CD4D', 'NRM', 'KBTBD13', 'AKR7A2', 'RTN3', 'RPP38', 'AIM1L', 'CHRNB4', 'COLEC10', 'CHIC2', 'FBXO15', 'ACP5', 'CHADL', 'JAG1', 'SERPINA7', 'IWS1', 'HDDC3', 'POLR2H', 'RABGGTA', 'PIK3CB', 'LINC00483', 'AZGP1', 'NOL8', 'MCOLN3', 'CALCB', 'OR5A1', 'IL22RA1', 'BPI', 'TMEM120A', 'ZMYND10', 'RHOV', 'FMNL1', 'FLJ36777', 'OR2V2', 'HMSD', 'OR6C76', 'SIAH2', 'GGT6', 'CCSER1', 'FKBP1B', 'TSIX', 'STXBP5L', 'PWARSN', 'IRAK1BP1', 'YME1L1', 'PLA2G16', 'ASNSD1', 'COMT', 'RIPK4', 'GALP', 'NANOG', 'PPP2CB', 'TTC36', 'SYNPO2L', 'TCEAL3', 'SNORA61', 'HNMT', 'SERPINA10', 'RPL39L', 'SPTBN2', 'NINJ1', 'C12ORF60', 'ACAD8', 'KBTBD12', 'CENPK', 'CYP2S1', 'TRAPPC13', 'PLB1', 'GBP1P1', 'TRPV1', 'GPN3', 'PAPD4', 'EPB41L4B', 'CCT8', 'TCF7', 'PARD3B', 'TAS2R16', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 2.8211922729788602e-15 NRMSE: 5.549158680131512e-16 MAPE: 4.632428338004504e-12 Pearson Correlation: 0.2537068228470372 Spearman Correlation: 0.2780707988877667 Coefficient of Determination: -2.252333557119979 RMSE: 1.2221033587288783 NRMSE: 0.3913999720498971 MAPE: 445.27540209165613 Predictor: ElasticNet Pearson Correlation: 0.8885501022232626 Spearman Correlation: 0.8694678103195599 Coefficient of Determination: 0.743765575531178 RMSE: 0.3826744795683082 NRMSE: 0.07527035396701579 MAPE: 263.4942553435204 Pearson Correlation: 0.47232361268564554 Spearman Correlation: 0.4339829673686705 Coefficient of Determination: 0.09408926409611773 RMSE: 0.6449901774952551 NRMSE: 0.20656938354762058 MAPE: 259.2127234099881 Predictor: RandomForests Pearson Correlation: 0.5933008157829469 Spearman Correlation: 0.5578059126193073 Coefficient of Determination: 0.2827718756353218 RMSE: 0.6402350083574289 NRMSE: 0.12593135490901433 MAPE: 544.1217845367421 Pearson Correlation: 0.4545343626744005 Spearman Correlation: 0.42989812840559116 Coefficient of Determination: 0.19566449614391324 RMSE: 0.6077556671071161 NRMSE: 0.19464438046083804 MAPE: 230.58928998639976 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['IFT74', 'GBA', 'ZNF679', 'HNRNPH1', 'KCNMB1', 'KEL', 'OR56A1', 'CCDC43', 'C6ORF201', 'LBX1', 'CECR7', 'GABPA', 'SNHG6', 'EFCAB14', 'BHLHE41', 'BAG2', 'BUD13', 'SPAG8', 'ZNF335', 'TMEM207', 'F2', 'C5ORF15', 'MXRA5', 'MRPL57', 'PCBP3', 'GLMP', 'ADAM6', 'TMPRSS3', 'HEPHL1', 'DIP2B', 'OR10H5', 'DBNDD2', 'SNX25', 'GALNT12', 'C8ORF22', 'EMP1', 'FAN1', 'NAGS', 'NR1I2', 'GPR82', 'FASTKD3', 'VNN1', 'SEC61A2', 'COX8A', 'MAP1A', 'METTL9', 'SSH1', 'FAM72B', 'ATP5E', 'GKN2', 'OR4F21', 'NSUN2', 'IL18RAP', 'GJA8', 'HSPA1B', 'COX4I2', 'LRRC30', 'OR4A15', 'NKX3-1', 'PLXNB2', 'PTS', 'HYAL1', 'GPR153', 'CEP295', 'SNHG3', 'RC3H1', 'RCN2', 'TSHR', 'RRP8', 'CPT1B', 'QPRT', 'ZBTB11-AS1', 'DPPA4', 'ASL', 'PCBD2', 'GCNT3', 'BMP2', 'ANKRD29', 'FAM179B', 'PPP1R8', 'DYNLL2', 'HIST3H3', 'FAM228A', 'NUDT13', 'IGF2-AS', 'CFAP20', 'TRIM37', 'TIGD7', 'IAH1', 'WDR25', 'PTTG2', 'FAM157A', 'GFRAL', 'LOC283332', 'NOX1', 'HIST1H1B', 'NFIA', 'EVI2A', 'CNNM4', 'OTUD7A', 'KCNH8', 'TAPT1', 'C11ORF53', 'TBX21', 'KIF2A', 'GALR2', 'NRSN1', 'C1ORF159', 'TMC8', 'OVCA2', 'ZNF860', 'PDCL3P4', 'NOM1', 'ATP6V1G2', 'USP6NL', 'TPP1', 'TRAPPC6A', 'NDP', 'LINC00934', 'SLC7A5', 'PDP1', 'SERPINI1', 'WSCD1', 'ACADVL', 'RUNDC1', 'HMHB1', 'G0S2', 'LOC340357', 'ARL5A', 'FREM2', 'SHARPIN', 'OIP5-AS1', 'CEP95', 'LMNA', 'FRYL', 'METRNL', 'OR2W1', 'PADI4', 'ACYP2', 'FAM149B1', 'SEC24D', 'HKR1', 'SLC11A2', 'HABP2', 'CPEB4', 'ATP9B', 'TWIST1', 'IL7R', 'MTIF2', 'IFITM4P', 'KLHDC2', 'GNAS', 'CNNM1', 'HGS', 'GYS1', 'TFE3', 'ZNF568', 'BDH2', 'BMP8B', 'GPR31', 'SUMF2', 'TECPR2', 'GPX2', 'NSUN5P1', 'NXT2', 'NTRK2', 'LRRC20', 'PEBP4', 'COL1A2', 'RAB33B', 'DHX9', 'ANAPC7', 'GPRC5B', 'LINC00029', 'SNX4', 'TK1', 'LINC00152', 'ZNF7', 'RPL6', 'RPL13AP3', 'PDE6G', 'PCBP2', 'FLJ13224', 'ARHGAP19', 'FAM8A1', 'FOXN2', 'HSD3B7', 'KBTBD8', 'ZFP41', 'CCDC88C', 'SLC8A3', 'COX19', 'OLFM2', 'GNPDA1', 'ATP10D', 'C1QC', 'THBS3', 'LOC441454', 'TULP1', 'LINC00887', 'STAB1', 'B3GNT8', 'MFNG', 'FAM155A', 'ZBTB48', 'AK9', 'WDPCP', 'RBM12B-AS1', 'SNRNP25', 'CCDC106', 'PTGER1', 'ZNF813', 'INPP1', 'INAFM1', 'CCR9', 'DBT', 'GATA3', 'HIST1H1C', 'PPP6R2', 'CPN2', 'LOH12CR1', 'SLC39A1', 'TDRD10', 'C15ORF62', 'AP1S2', 'GAB4', 'ZNF346', 'SLC41A1', 'NCAPD3', 'RPS26P11', 'LOC644936', 'MAPRE3', 'LSM11', 'WRB', 'PSMD11', 'CYP4F12', 'FAM122C', 'ATP7B', 'PRSS35', 'ZSCAN21', 'MILR1', 'ELOVL2', 'TNFSF13', 'LKAAEAR1', 'KRTAP5-7', 'SUPT20HL2', 'INTS10', 'KLF4', 'PER1', 'DNAJC14', 'FAM86C2P', 'SGMS2', 'PCCB', 'IVD', 'IK', 'EPS8', 'A2M', 'CHRNA4', 'ARHGAP10', 'TCP1', 'PPARGC1B', 'DEFB109P1B', 'SMCO2', 'PPIP5K1', 'ALCAM', 'DNAJC18', 'FBXO34', 'LIN7B', 'GLTSCR1', 'KLC2', 'JAG2', 'RPP25L', 'NUP160', 'C19ORF18', 'NACC1', 'ZNF844', 'TMEM218', 'DEFB104A', 'ZFP37', 'SRSF2', 'CALCOCO2', 'PARL', 'IL6ST', 'CBX5', 'CSNK1G1', 'SYT8', 'ACAA2', 'AP1M2', 'PIR', 'SPEF1', 'TSPAN8', 'GPX6', 'MAGEE1', 'PSMB2', 'CRHR1', 'SSX5', 'AGAP6', 'PXT1', 'CEBPA', 'ARMC6', 'CASQ1', 'RIPK1', 'TMC6', 'FAAH', 'ACBD5', 'OPRL1', 'STAG2', 'KRTAP10-6', 'TMEM136', 'PPIL3', 'GATAD2B', 'SLC9A6', 'DEPDC1', 'LINC00999', 'BPGM', 'GANC', 'MADCAM1', 'TMEM132C', 'SMG1P2', 'GOLGA6L9', 'C9ORF47', 'LMO2', 'CLDN18', 'TIPIN', 'TRMT10A', 'WDR62', 'YJEFN3', 'TRIP6', 'CD63', 'TRIM34', 'DLG1', 'SLC25A30', 'FAM110C', 'UBR4', 'ZDHHC7', 'TEX33', 'TMEM74', 'NR5A1', 'ATP4B', 'IGDCC3', 'OR6B2', 'TCEA2', 'KLHDC7B', 'LINC00094', 'C9ORF78', 'PPIE', 'SCGB1B2P', 'PTCHD4', 'CNIH3', 'OR6Y1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.9560912877393092 Spearman Correlation: 0.8721880668636444 Coefficient of Determination: 0.9141105485283324 RMSE: 0.13152735201730778 NRMSE: 0.04684856705870268 MAPE: 25.406856638205717 Pearson Correlation: -0.017018717302933833 Spearman Correlation: 0.2339405728250976 Coefficient of Determination: -1.0488380075388211e+26 RMSE: 6637333166296.704 NRMSE: 1601789020994.933 MAPE: 79954576610077.48 Predictor: ElasticNet Pearson Correlation: 0.8687659922187823 Spearman Correlation: 0.7456958991250011 Coefficient of Determination: 0.7416895985663198 RMSE: 0.2280957058764352 NRMSE: 0.08124513121155305 MAPE: 50.02389135840436 Pearson Correlation: 0.8363111841961985 Spearman Correlation: 0.6419955361039416 Coefficient of Determination: 0.6959610006718633 RMSE: 0.3573584508347347 NRMSE: 0.08624139074612899 MAPE: 89.25582342781382 Predictor: RandomForests Pearson Correlation: 0.8624102658716828 Spearman Correlation: 0.712311194776484 Coefficient of Determination: 0.7409440769548095 RMSE: 0.22842462750817646 NRMSE: 0.08136228940629615 MAPE: 54.59435970842218 Pearson Correlation: 0.7856148115439451 Spearman Correlation: 0.7336212892345406 Coefficient of Determination: 0.5826498273345266 RMSE: 0.4186872234677671 NRMSE: 0.10104187645528565 MAPE: 77.43433467081502 Protein: CCND1 x_train_column_count: 859 x_train columns: ['SIRT6', 'HEATR3', 'FOXO3B', 'CBR1', 'LRIG2', 'SHQ1', 'DERL3', 'PVR', 'SPZ1', 'NUDT2', 'FAF2', 'KIN', 'FGF1', 'DYM', 'PIP5KL1', 'CDCA8', 'TRABD', 'LOC100190986', 'SPATA20', 'SNORA32', 'SNORA66', 'RMRP', 'POLD1', 'PIH1D1', 'ASAP2', 'ZNF549', 'MFSD2B', 'TIGD7', 'DMXL2', 'SH3PXD2A', 'OR7A10', 'PRAMEF11', 'RPS29', 'CLUL1', 'APP', 'WFIKKN2', 'PMM1', 'PODXL2', 'CRNKL1', 'KCMF1', 'TAF1C', 'HDDC2', 'TRIM77', 'BIRC8', 'HIST1H3G', 'PDE1C', 'CCR3', 'GRIP2', 'PCNAP1', 'ZSCAN30', 'FCRLA', 'SEZ6L2', 'XPO5', 'TANK', 'L3MBTL2', 'SPP2', 'GOLPH3L', 'CCNL1', 'QRICH2', 'PCNXL3', 'SEC23IP', 'TOPORS', 'RPL38', 'INPP5A', 'FBXO5', 'HAUS6', 'ZNF446', 'FADS6', 'GTDC1', 'SERPINB11', 'PTPRU', 'SPINK2', 'AEBP1', 'CDHR3', 'ELMOD1', 'TRAPPC2L', 'ENTPD2', 'RNASEH2B', 'ETFDH', 'RPS10', 'RECQL5', 'ZNF292', 'P2RY2', 'COLCA1', 'ATP5H', 'DGCR5', 'SNAP25', 'MSLNL', 'PTP4A1', 'IMPA2', 'TBC1D24', 'PABPC1P2', 'LY9', 'GAL', 'USP13', 'MRPL36', 'HRSP12', 'ZCCHC5', 'TMEM150B', 'RP9', 'MGST2', 'DLD', 'ZNF296', 'RXRB', 'CD59', 'SLC38A9', 'CLDN7', 'TRIM38', 'GSTT1', 'GNG7', 'IL3', 'EIF3J', 'TMED3', 'SRP68', 'C8ORF22', 'DCP2', 'GTSE1-AS1', 'GABRG1', 'RALGAPB', 'PALMD', 'OR5V1', 'MRS2', 'PRKRIP1', 'AQP1', 'GOLM1', 'TOLLIP', 'PPP1CC', 'IKZF1', 'KHDRBS2', 'BNIPL', 'APOL5', 'PLXNA4', 'IFT27', 'RNF167', 'BRICD5', 'PEF1', 'NXPE4', 'SFT2D2', 'CCBL1', 'ITGA3', 'RSPO1', 'KIAA1715', 'KDELR2', 'NDRG3', 'LINC00319', 'DUSP15', 'RHAG', 'SLC41A2', 'SLCO1B7', 'HELT', 'SS18', 'PAPOLG', 'ADRA2A', 'PRB2', 'EHMT1', 'VPS13A', 'CLDN16', 'RSC1A1', 'MT1M', 'LMX1A', 'EIF1AD', 'ZNF667', 'MARK2', 'GALR3', 'SULT1A3', 'CDC7', 'LRRC30', 'CREBL2', 'C7ORF49', 'MAD2L2', 'TSNAX-DISC1', 'NT5C1B', 'MAPK1IP1L', 'GDF6', 'EPHA10', 'LOC284379', 'GGCT', 'ZKSCAN7', 'ANP32A', 'C1ORF21', 'EXOSC2', 'TMEM45B', 'PSPC1', 'SAMD12', 'SLAIN1', 'VENTXP1', 'CCDC18', 'LIPC', 'CLDN4', 'CT62', 'AFF4', 'CACTIN', 'WDR54', 'NEURL1', 'IGSF3', 'CSTB', 'OXA1L', 'RNF217', 'STRN', 'MMP3', 'ZSWIM8', 'CGREF1', 'PCOLCE', 'BIRC6', 'RPE', 'VSTM4', 'CLLU1', 'GEMIN2', 'POT1', 'NUDT5', 'DHRS11', 'CDK11B', 'LIN28A', 'CCDC64B', 'ERP29', 'KRTCAP2', 'LONRF3', 'GLT1D1', 'SH3GLB2', 'NGF', 'SPTLC2', 'CARD16', 'SNORA11B', 'ZFHX4-AS1', 'SORBS2', 'TMEM203', 'GCFC2', 'MTIF3', 'HIGD1B', 'ZNF639', 'ZNHIT6', 'NCOA5', 'SPDYE5', 'NR2E3', 'CTAG1B', 'SLC9A7', 'ZDHHC22', 'RIMKLB', 'OR10X1', 'TIMMDC1', 'ASTL', 'RSPH6A', 'RARS2', 'EVA1C', 'TPM3P9', 'RAB31', 'NCOA6', 'MAEA', 'KIAA1024', 'POLD4', 'FBXO25', 'C10ORF11', 'SEC22A', 'MUSK', 'PPM1D', 'C3ORF14', 'ABHD17A', 'DUSP3', 'GPLD1', 'HYOU1', 'ZSCAN16', 'EMX2', 'OR7G2', 'C10ORF62', 'AUP1', 'NFATC2', 'STON2', 'REST', 'ESF1', 'AXIN2', 'EPOR', 'CHMP5', 'WISP2', 'TFPI2', 'PRB4', 'RBFA', 'TBR1', 'TIA1', 'ZNF816', 'CELF6', 'SHANK1', 'HSP90AA1', 'ABCC5', 'SBF1P1', 'LUZP4', 'ARID5B', 'ISG20L2', 'EIF4B', 'CRYL1', 'PRAMEF4', 'TBC1D10B', 'HECTD1', 'MED29', 'OR4K14', 'SLC3A2', 'ZNF480', 'SPANXN4', 'XRRA1', 'TROAP', 'MEX3A', 'IL1RN', 'ANKLE1', 'C3ORF33', 'DAP', 'CD84', 'SV2C', 'HOMEZ', 'DOC2B', 'EDEM1', 'ID2', 'GGTLC1', 'GPR176', 'TPD52L3', 'DDO', 'LOC441204', 'CHERP', 'MRPL3', 'CLEC17A', 'LY6H', 'ID1', 'INTS4', 'FAM90A7P', 'FASTKD2', 'LSMEM2', 'LOC284632', 'SLC17A1', 'SYNPO', 'AUTS2', 'TMEM19', 'ZMIZ1-AS1', 'FBXO10', 'EPB42', 'C10ORF55', 'CD44', 'MBNL3', 'ACER1', 'PRR23C', 'TM4SF19', 'HMX1', 'RPS10P7', 'PEX14', 'RINT1', 'CDX4', 'ZDHHC4', 'NCOA1', 'LMCD1', 'OR7C1', 'H1F0', 'ACSL5', 'APOE', 'TMEFF2', 'LOC100272216', 'TEX26', 'ZFHX3', 'HSPD1', 'EFCAB5', 'ATXN7L1', 'AKAP1', 'RAD1', 'DYRK1B', 'SIGLEC11', 'GPAM', 'CCL27', 'ZCCHC9', 'HOXA3', 'CCDC159', 'ALMS1', 'DNAJB9', 'TBL1Y', 'TBC1D2', 'DGKZ', 'SREK1IP1', 'NFYC', 'COPS7A', 'LYPLAL1', 'SCN5A', 'TMLHE', 'FAM127A', 'RBBP7', 'CDH11', 'POLH', 'CDC42SE2', 'PTPN3', 'MARVELD2', 'LRMP', 'ABTB1', 'RPS15A', 'OGFR', 'POLK', 'RIOK2', 'BLOC1S3', 'GKN1', 'NECAB2', 'CCDC169', 'ZNF532', 'TUBB4A', 'VTI1B', 'PNKD', 'TRIM37', 'RPL9', 'NKAIN4', 'PRMT5', 'SCN4A', 'OR11H6', 'ADAT1', 'BDP1', 'PRKG2', 'ACVR2B-AS1', 'SIGLEC1', 'ZNF430', 'OR8G2', 'PLOD3', 'HIPK2', 'CHMP2B', 'MATN1', 'COA1', 'CGN', 'CSNK1A1P1', 'H2AFY', 'TDRD9', 'ENOX1', 'PLCB2', 'PPIL6', 'IGF2BP2', 'ZNF699', 'HMGN3', 'UBXN2A', 'PCBP3', 'CRYGS', 'MPND', 'IFNA16', 'C9ORF72', 'ANP32AP1', 'LFNG', 'SERPINA11', 'NEU3', 'RBAK', 'TECTB', 'PPP1R12A', 'PATE2', 'PPP1R7', 'SEMA6C', 'SLC27A1', 'C19ORF60', 'CCL20', 'PM20D1', 'TRIM64', 'ZNF703', 'CYP4F3', 'LRRIQ1', 'SCARNA23', 'RTN4RL2', 'ATP8A1', 'ZDHHC17', 'ZNF595', 'TSEN15', 'EPPK1', 'CRIPAK', 'ZNF709', 'IST1', 'MET', 'LBR', 'UBE2L6', 'BCL2L11', 'SMIM10L2B', 'GPIHBP1', 'ZDHHC13', 'SLC12A9', 'GPR39', 'PGBD5', 'CLIP2', 'ZNF266', 'TBC1D3B', 'DUT', 'NINL', 'GDI2', 'PMS2', 'ST6GALNAC3', 'CCDC181', 'CEP76', 'USP30', 'LUZP2', 'B3GALT5', 'MICALCL', 'NNAT', 'GPR55', 'FAM222B', 'SKP2', 'ZNF350', 'PCSK1N', 'RPL10L', 'ASB7', 'CRB1', 'ACOXL', 'MPHOSPH9', 'TNFSF10', 'SIPA1L1', 'LCE1D', 'TRPC2', 'UCN3', 'ZNF354B', 'TTLL8', 'FAM72A', 'STH', 'SPEN', 'GABRB3', 'NLGN4Y', 'TBX5', 'OR6K6', 'AFAP1', 'BCL2A1', 'ZNF664', 'MMRN1', 'OR4D5', 'PIGR', 'ZAR1L', 'PCBP1', 'GAGE4', 'B4GALT3', 'SNORA11', 'MGAM2', 'C8ORF31', 'DNAJC18', 'PLEKHA8', 'LOC100130331', 'MAN1C1', 'UTP3', 'TRIM51', 'CD93', 'GPD1', 'LOC643923', 'ZNF461', 'KDSR', 'PPOX', 'RALGPS1', 'N4BP1', 'ZNF341', 'STYX', 'TNC', 'SLC1A5', 'BCL2L1', 'PIP', 'RCCD1', 'AADACL4', 'TAS2R39', 'C19ORF66', 'COQ10A', 'PTAFR', 'DUSP4', 'PRR7', 'PEBP1', 'OR11L1', 'OR9I1', 'ERG', 'FOXB2', 'CNP', 'ITGB7', 'NKAPL', 'SOHLH2', 'LARS', 'STAC', 'RPL3L', 'ATP6V1G3', 'TCAIM', 'ZNF442', 'NOP16', 'OR11H12', 'DNHD1', 'NOTCH4', 'SSX5', 'ZNF543', 'ZNF440', 'AAAS', 'KRTAP5-6', 'HMP19', 'SNORA58', 'MGAT5', 'CREG2', 'LCMT2', 'PRPF8', 'SYCE1L', 'GPR89B', 'UNQ6494', 'WDFY3-AS2', 'COL24A1', 'CIAO1', 'DEFB108B', 'AKAP10', 'ARHGAP28', 'SLC17A8', 'CPE', 'KIAA1551', 'ZNF705D', 'ABCA17P', 'RHBG', 'MVP', 'CRX', 'ABHD1', 'KRTAP2-2', 'TMEM236', 'LAMP2', 'SPATA4', 'SYCP3', 'SEPT14', 'PPIF', 'GTF3C4', 'TSC22D2', 'MOB3B', 'WDR18', 'BAZ2A', 'C9ORF106', 'ZNF160', 'UBN2', 'KLHL3', 'GLRA1', 'OR9K2', 'SCN1A', 'ZNF670', 'PSMB5', 'MMP23B', 'SPECC1', 'ZNF679', 'TRIM74', 'ASAH2B', 'ASCC2', 'C20ORF202', 'ANKRD20A20P', 'FLT3', 'MLANA', 'TRIM71', 'TBRG4', 'MKI67', 'SUMF1', 'BACE1', 'SHD', 'C22ORF29', 'ZMYM6', 'LTC4S', 'SPATA5L1', 'PEX12', 'TRIO', 'PTTG2', 'C9ORF129', 'RDH11', 'FAM26F', 'DAW1', 'WNT3A', 'OPALIN', 'GCC2', 'ADAMTSL2', 'ALCAM', 'CGA', 'EIF4A2', 'C3ORF52', 'SCTR', 'ZNF540', 'MRPL35', 'SPATA24', 'HINT2', 'C4BPB', 'GBP4', 'SKP1', 'LOC100128239', 'MYO3B', 'SMCO2', 'FH', 'MMP10', 'CSHL1', 'SNN', 'B3GAT2', 'FXYD4', 'SMPDL3A', 'C1ORF198', 'ACVR1', 'MNS1', 'SDHAF2', 'FAM65C', 'STOX1', 'DCTN4', 'C1ORF68', 'OR11H4', 'SLC35F2', 'OR52A1', 'GOLGA6C', 'NUP210', 'APTX', 'GPC3', 'ASTN2', 'TRIM35', 'MIR17HG', 'TAC4', 'DBN1', 'PLEKHJ1', 'VWCE', 'APC', 'USE1', 'TSPO2', 'MUSTN1', 'EFEMP2', 'ERF', 'UBE2D3', 'TPT1', 'CCM2', 'RNF182', 'C14ORF39', 'SNORA45B', 'AIDA', 'EDC4', 'TTC28-AS1', 'CAPN14', 'PRRX2', 'PTPN9', 'TBPL1', 'MROH6', 'EIF4EBP1', 'XPO4', 'RPL8', 'LCE2B', 'AMIGO2', 'EID3', 'PIP5K1C', 'RPL32P3', 'NFAT5', 'SSUH2', 'ERBB2', 'RRBP1', 'ZNF335', 'SNX11', 'H2BFXP', 'RAB24', 'NR1H2', 'SHC4', 'LOC606724', 'FZD9', 'CWC27', 'CSMD2', 'STPG1', 'GLIS3', 'ETV4', 'LINC00626', 'SVEP1', 'DPH2', 'CDX1', 'PDZD7', 'FBXO47', 'CATSPER2', 'ASPHD2', 'TUBAL3', 'ZNF772', 'MSX2P1', 'VCAM1', 'RAB4A', 'NGLY1', 'LINC01098', 'OR51F2', 'ADCY10', 'AKR7A3', 'MVB12A', 'AKIP1', 'APEX2', 'KCNJ2', 'SGPP2', 'GORASP2', 'INPP5E', 'TMEM254', 'LCE3A', 'COL10A1', 'ELP6', 'TMEM189-UBE2V1', 'OTC', 'ESPNL', 'STAG3L3', 'TXNRD2', 'SECTM1', 'PLXDC1', 'ITGAM', 'VPREB1', 'CHP1', 'LINC01555', 'VWA2', 'OR10A3', 'C1QTNF1', 'FGF21', 'CD300E', 'REG1B', 'NR6A1', 'C2ORF16', 'FAM46A', 'KIF1C', 'POM121C', 'NSUN5', 'UGT1A1', 'SNORD116-19', 'FAM50B', 'LOC154449', 'AMOTL1', 'PUS7', 'STX5', 'CORO2A', 'TBRG1', 'TBXA2R', 'MAF', 'BPIFC', 'OXER1', 'TOX4', 'CEP70', 'CNKSR3', 'FAM183B', 'RUNDC1', 'KIAA1468', 'OLFML3', 'CEP83-AS1', 'SGCD', 'LAMB2P1', 'RBM48', 'CTNNAL1', 'TRIM55', 'PTTG1', 'MMP23A', 'ART3', 'USP53', 'LIN52', 'MT1B', 'FGF9', 'EXO1', 'SETBP1', 'ADAMTS14', 'IFT52', 'POLR3G', 'SERPINE1', 'OR1A2', 'OSER1', 'ADAM29', 'C16ORF96', 'ELFN2', 'PRR21', 'DZANK1', 'EXOC3', 'CBLL1', 'C11ORF73', 'PMS2P2', 'GABARAPL2', 'GOSR1', 'LRFN4', 'SPATA3', 'PLSCR3', 'KRTAP12-3', 'OR6X1', 'AFP', 'ARRB1', 'ZMYND11', 'LINC01312', 'PACRG-AS1', 'FAM206A', 'PPIAL4D', 'NOL3', 'STK35', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 9.140431857919392e-16 NRMSE: 5.757099577949833e-16 MAPE: 3.917052408252238e-12 Pearson Correlation: 0.1993805068817087 Spearman Correlation: 0.15978004713275729 Coefficient of Determination: -1.4621877614247687 RMSE: 0.4330171117973915 NRMSE: 0.27664936034384396 MAPE: 591.6033324261165 Predictor: ElasticNet Pearson Correlation: 0.6831897064921565 Spearman Correlation: 0.6891921898908846 Coefficient of Determination: 0.41257940475446764 RMSE: 0.1744546919457937 NRMSE: 0.10988026047175356 MAPE: 486.6178652820564 Pearson Correlation: 0.3639076349208462 Spearman Correlation: 0.2677464806294343 Coefficient of Determination: 0.13189418032960576 RMSE: 0.25711700977176266 NRMSE: 0.1642689269059702 MAPE: 243.5327605560785 Predictor: RandomForests Pearson Correlation: 0.5739991988500821 Spearman Correlation: 0.5822857662249812 Coefficient of Determination: 0.29018779674704553 RMSE: 0.1917696168439463 NRMSE: 0.12078606321421591 MAPE: 500.9780554163753 Pearson Correlation: 0.32061564396720804 Spearman Correlation: 0.28320802005012535 Coefficient of Determination: 0.10137213884276541 RMSE: 0.26159799709517767 NRMSE: 0.16713177514673827 MAPE: 239.578011892933 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['TCEB3C', 'TP53AIP1', 'CLEC3B', 'TMEM2', 'PABPC1P2', 'WDR12', 'SRR', 'KHNYN', 'TMEM209', 'SCEL', 'SERPINA9', 'DHX9', 'ATP2B4', 'OPN5', 'CCL13', 'VAMP7', 'UBAP2', 'TAF6L', 'ADAM21', 'TYMS', 'HDAC5', 'SLC6A19', 'GRSF1', 'TAF2', 'AWAT1', 'CCNB3', 'CWF19L2', 'RNU4ATAC', 'BRAT1', 'ZNF485', 'EDA', 'SCP2', 'LINC01341', 'SBK1', 'UNC5C', 'OR6N1', 'POLD2', 'ID1', 'LRRC66', 'RENBP', 'PIGY', 'IPO8', 'USF1', 'GRIN1', 'C12ORF49', 'NUSAP1', 'PABPC1L2A', 'FAM135A', 'VAMP5', 'COMMD8', 'USP4', 'HTATIP2', 'MRPL52', 'ZRANB1', 'EIF3E', 'PTPN4', 'SLCO3A1', 'RPL19P12', 'UNC79', 'ANKRD36BP1', 'ANGPT2', 'MED25', 'GPR160', 'CACNA1C', 'HSF5', 'DACH2', 'CDKN1C', 'TXNDC11', 'PHF10', 'MYDGF', 'TMEM186', 'URM1', 'SNAP91', 'SLC43A2', 'NUGGC', 'ATP6V0B', 'PRDM5', 'CENPC', 'MORN4', 'INTS8', 'COL15A1', 'SPAM1', 'MFSD3', 'PTAR1', 'ZNF800', 'CD4', 'HIPK4', 'MCF2L', 'DIMT1', 'ZNF207', 'PTGFRN', 'FAM163B', 'SERINC2', 'CASC2', 'KRT33B', 'THEM4', 'C3ORF38', 'MYH14', 'P2RX7', 'COL4A5', 'LRRC4', 'LILRA6', 'ZNF75D', 'SOD2', 'FAM99A', 'KATNA1', 'CLEC10A', 'RCE1', 'ADAL', 'UBE2D4', 'LDOC1', 'ZDHHC9', 'GTPBP10', 'RNF8', 'AAAS', 'POLR3G', 'SELK', 'C9ORF3', 'KLHL8', 'TAF1D', 'RRP15', 'LAS1L', 'ABCF3', 'SF1', 'NPB', 'OR9Q1', 'PRPS1L1', 'FOXL1', 'DDI2', 'FBXO6', 'NMBR', 'AASDHPPT', 'FRY', 'IFI30', 'CNPY3', 'PRR4', 'TSEN2', 'HOXB1', 'CKAP2L', 'NLGN2', 'CCDC77', 'MCF2', 'YIPF3', 'PRR23B', 'CPEB3', 'ANXA2', 'GPR27', 'PMS2P4', 'PRKAR2B', 'POTEE', 'PAGR1', 'CYB5RL', 'ABHD11-AS1', 'ZBTB2', 'CCL1', 'PCLO', 'RPL22L1', 'SPHK2', 'PRPF38B', 'ZNF846', 'OR6C4', 'NXPE4', 'LINC01138', 'LY86', 'MKX', 'CTSD', 'CRYBB2', 'DKFZP434L192', 'RELL1', 'CENPBD1', 'PLLP', 'DCAF8L2', 'PHF13', 'INSIG1', 'MIEN1', 'PPFIA2', 'SLC39A9', 'CDK5', 'METTL25', 'CBX1', 'HIST1H3C', 'FAM72B', 'RALGPS1', 'CABLES1', 'FANCF', 'TTC8', 'ADRBK1', 'TKTL1', 'TCN1', 'GNG5', 'ZNF91', 'DDIAS', 'LINC00442', 'NEURL1', 'UQCC3', 'NLRX1', 'XPO1', 'LINC00238', 'ADAM20', 'RASSF6', 'TRIO', 'SLIRP', 'BRI3BP', 'CDCA3', 'PP2D1', 'TRAPPC11', 'IFNA16', 'RHOXF1', 'NAP1L2', 'C20ORF202', 'LMNTD1', 'TIMM10B', 'ELFN2', 'LOC145845', 'UBE2W', 'WWC3', 'FASN', 'CCDC62', 'UBA7', 'NBEAL1', 'PROM1', 'POLD3', 'BAIAP3', 'TEAD4', 'SERPING1', 'DCLK2', 'LOC146880', 'VBP1', 'TNFSF14', 'ATL2', 'TACC3', 'OR51T1', 'NR2F1', 'FAM179B', 'LINC01001', 'DDX11L2', 'ZNF878', 'STAT4', 'PIN1P1', 'C10ORF91', 'RPL22', 'DDB1', 'KLHL17', 'ACSM4', 'SKOR1', 'LMO3', 'MYO1D', 'B4GALT3', 'PLS3', 'FAM181A', 'MTMR11', 'CYP3A4', 'KANSL1', 'KAZALD1', 'PLP2', 'TXLNB', 'METTL21C', 'HYPK', 'CA5B', 'CBWD1', 'GAS2', 'TUBA4B', 'WIPF1', 'RAD52', 'FBP1', 'NOP9', 'SOWAHD', 'LAG3', 'SPAG11B', 'OR1J1', 'RAB21', 'INE1', 'CT62', 'HOOK2', 'CCDC7', 'ZNF771', 'IDUA', 'DDX59', 'NHLRC4', 'TCEAL4', 'CCNE1', 'MMP10', 'NUP205', 'THOP1', 'KIAA1211L', 'OR51E1', 'RPE', 'RAB11A', 'TMEM69', 'TMEM126B', 'PIAS1', 'LINC00426', 'CELF3', 'SH3BGRL2', 'NOD1', 'CTU1', 'ATP8A1', 'FUT7', 'RPL26L1', 'NCK1', 'GNGT2', 'SLC38A10', 'EIF3B', 'YBX2', 'COX7C', 'TRIP10', 'BEND5', 'UGT1A3', 'LACC1', 'FABP3', 'ERICH5', 'NPM2', 'VPS8', 'PSMA1', 'DEFB119', 'SLC25A41', 'NBPF7', 'STRN', 'PGA3', 'PPP2R5A', 'GOLGA2P3Y', 'DUOX2', 'PRSS33', 'ABHD4', 'PLCH1', 'RAB9B', 'CKS2', 'CDKL4', 'GBX1', 'PDCD5', 'FAM86JP', 'NPVF', 'RIN3', 'LGALS9B', 'NCAPG2', 'RASIP1', 'RRBP1', 'KRTAP15-1', 'DMBT1P1', 'SMS', 'LOC341056', 'GCG', 'TGFBRAP1', 'CDK3', 'PLAC1', 'TAF5L', 'SNORD116-4', 'HSD17B2', 'OR4M1', 'SPATA22', 'TMEM168', 'BOP1', 'ATP13A4', 'GABARAPL2', 'PASD1', 'FETUB', 'CRHBP', 'ALX3', 'KLRAP1', 'IL12B', 'PRLR', 'TPM2', 'RHOD', 'HNRNPU-AS1', 'MAST3', 'TAF9B', 'SYF2', 'TAS2R3', 'DRG1', 'WDR7', 'YPEL2', 'SNRPGP15', 'MATN2', 'TIGAR', 'MAPK9', 'FBXO39', 'GJD4', 'RBBP5', 'FUK', 'AOX2P', 'C11ORF24', 'ALDH1L1', 'AIPL1', 'SOX7', 'PRO0628', 'ISG20', 'DUSP27', 'SLC38A1', 'ZNF354A', 'PHLDA3', 'EGFL7', 'TUBA3FP', 'SH3D21', 'ANKAR', 'CEP76', 'MRPL48', 'TTC27', 'RPL32P3', 'BCDIN3D-AS1', 'GINS4', 'SAMD11', 'RALGAPA2', 'GNAI2', 'PIK3AP1', 'KDR', 'SPTLC1', 'LRRC43', 'ZNF655', 'SLC25A38', 'POLR2F', 'ATPIF1', 'WBSCR22', 'UNK', 'GPR89B', 'CCNI2', 'KLHDC8B', 'CTAGE4', 'ELAVL1', 'LDHD', 'C8ORF4', 'GGT5', 'LCE1C', 'WSCD1', 'CHMP2A', 'LINC00632', 'LDLRAD2', 'UCN2', 'SHMT1', 'LRRC55', 'CYP8B1', 'EHD4', 'MAP4K1', 'TMCO6', 'NUBP1', 'SESN3', 'OPRL1', 'NAA10', 'ACRV1', 'AADAC', 'LRP11', 'H6PD', 'WDFY1', 'ZNF71', 'NUP43', 'PCTP', 'HNRNPK', 'ADGRA2', 'FAM156A', 'HEY2', 'HIST1H1C', 'DNAJB8', 'EML4', 'MROH2B', 'LOC645166', 'DCANP1', 'CLEC1B', 'AQP9', 'KCTD17', 'ARHGDIG', 'B4GALNT1', 'SLC37A4', 'GNAZ', 'PROKR1', 'PCDH9', 'SS18L1', 'OXNAD1', 'AGAP2-AS1', 'RSPH4A', 'SHCBP1', 'ALLC', 'KRT20', 'STX11', 'GSTZ1', 'MED19', 'VAT1L', 'LINC00620', 'HIRA', 'SUCLG1', 'OR10X1', 'PAN3', 'GNG4', 'DBP', 'BRF1', 'PADI4', 'DLX5', 'ACTL7A', 'SNORA65', 'TTYH2', 'LOH12CR2', 'HLA-DQB2', 'FAM21A', 'SLC16A1', 'APOBEC4', 'RNF115', 'PHGDH', 'LOC391322', 'ZNF614', 'PIGW', 'AMN', 'P2RX1', 'LARP1', 'C7ORF62', 'HRAS', 'CDK15', 'TAS2R46', 'MSMB', 'LOC606724', 'MIR4697HG', 'ZNF772', 'OR56A4', 'CLEC4M', 'SPINK2', 'PPP1R16B', 'MTNR1A', 'VIL1', 'CAND2', 'SH2B1', 'SELE', 'C20ORF27', 'ZNF117', 'OR5C1', 'DHFR', 'CACFD1', 'CNKSR2', 'NXF5', 'PSMD5-AS1', 'NRN1L', 'TMPRSS4', 'C3ORF35', 'HMX2', 'WDR3', 'SLC39A1', 'SEZ6', 'XIAP', 'ZYX', 'SST', 'CLEC17A', 'C8ORF82', 'DOLK', 'SNED1', 'GOLGA8F', 'C1RL', 'NODAL', 'PRB1', 'FGF13', 'SPNS1', 'TATDN2', 'MAP2K3', 'OMG', 'FOXJ2', 'ZFPL1', 'LMNTD2', 'TNFRSF1B', 'STRADA', 'UCKL1-AS1', 'NAPEPLD', 'ZNF703', 'B9D1', 'LCA5L', 'ZNF570', 'PNLIP', 'MIA2', 'SERAC1', 'OTUD6B', 'SRP72', 'WBSCR16', 'CRBN', 'ANKEF1', 'PIANP', 'TIMM17B', 'QPRT', 'HOPX', 'CDHR4', 'TUBGCP2', 'DDX49', 'ZNF304', 'PAFAH1B1', 'PKIB', 'ANKRD31', 'C12ORF29', 'C6ORF48', 'RNASE12', 'EFCAB12', 'BAG4', 'PPP5C', 'ST6GAL1', 'CHID1', 'ZNF484', 'RPH3A', 'NDUFS7', 'NAA25', 'LOC728323', 'SMARCAL1', 'YWHAH', 'TP53INP2', 'HMSD', 'ERLIN2', 'PIGA', 'TP53INP1', 'C14ORF166', 'CENPF', 'TMEM132B', 'MAD1L1', 'GREB1L', 'CASC3', 'MUM1L1', 'LOC653786', 'CHI3L1', 'SNCB', 'DNAJC15', 'HES7', 'EPB41L3', 'PDK4', 'COA3', 'CRYBA1', 'MAFB', 'POLB', 'MFF', 'NOB1', 'MAP1A', 'TTC28-AS1', 'VCX3B', 'KPNA5', 'DERA', 'FHL5', 'OR4D5', 'TSEN34', 'IGSF9', 'KLF11', 'PDE7A', 'POLR2J2', 'SERINC4', 'FAM127A', 'CD9', 'YES1', 'RPL3L', 'ZC3H12B', 'MEX3B', 'MYBPHL', 'PAXBP1', 'ECI1', 'LOC285696', 'ISL1', 'C1ORF52', 'LMX1B', 'SPINT3', 'LCN6', 'KCNE2', 'CRIP3', 'TNFRSF11B', 'KCNK1', 'PLAGL2', 'CAMK1D', 'COQ10B', 'AIRE', 'PRIMA1', 'DTNBP1', 'GSC2', 'MVB12B', 'VPS13B', 'TM4SF4', 'CHODL', 'MTERF1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 2.975544864251737e-15 NRMSE: 5.069330398916022e-16 MAPE: 2.6870013004218505e-12 Pearson Correlation: 0.416929980956298 Spearman Correlation: 0.354505667152957 Coefficient of Determination: -2.1788023798237957 RMSE: 1.547075513468797 NRMSE: 0.3423112099720759 MAPE: 1664.9458958393218 Predictor: ElasticNet Pearson Correlation: 0.9378954206783621 Spearman Correlation: 0.8553912884129047 Coefficient of Determination: 0.8724694479147329 RMSE: 0.36708494804368025 NRMSE: 0.06253896247571089 MAPE: 324.88643691632547 Pearson Correlation: 0.801015407645758 Spearman Correlation: 0.6653025598822929 Coefficient of Determination: 0.6408996137581546 RMSE: 0.5199812500203211 NRMSE: 0.11505282664461139 MAPE: 590.2565012024558 Predictor: RandomForests Pearson Correlation: 0.852736623749312 Spearman Correlation: 0.6913361376574496 Coefficient of Determination: 0.7225732337164382 RMSE: 0.5414191803226832 NRMSE: 0.09223966818111372 MAPE: 541.6697567488911 Pearson Correlation: 0.7959800440396992 Spearman Correlation: 0.6199020724956276 Coefficient of Determination: 0.621490895800872 RMSE: 0.5338483595977779 NRMSE: 0.11812111065334172 MAPE: 264.3356938407306 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['ZP2', 'RNASE7', 'KIF2B', 'VASP', 'MBD3L1', 'PCAT4', 'CXCL12', 'HOMEZ', 'TEP1', 'NIPAL3', 'C2ORF78', 'UBQLNL', 'SERINC5', 'SIGLEC10', 'C2', 'SELP', 'CD209', 'ARHGAP8', 'CYB561A3', 'ALDOA', 'NODAL', 'SMARCE1', 'EPHX2', 'TGFBR2', 'TCEB2', 'CSRNP2', 'TM6SF1', 'SERPINE3', 'ARPC4', 'CCDC66', 'HSFY1P1', 'RBM39', 'ORAI1', 'PARK7', 'EIF4EBP3', 'FAM129B', 'CPEB1', 'LOC100128239', 'TGFB3', 'SLC26A9', 'AGAP4', 'ARSK', 'C20ORF202', 'TTLL3', 'CDKN1B', 'NOP14', 'PON2', 'REG1A', 'RPE', 'CLRN3', 'PSG3', 'PDF', 'EPC2', 'SLC44A3', 'INGX', 'C1ORF52', 'FAM86C2P', 'DCHS2', 'CENPBD1P1', 'SHMT2', 'LIN37', 'ZC2HC1C', 'SERPINA7', 'CCDC91', 'MUC20', 'VGLL4', 'TPM3', 'SUCLG1', 'TSPAN7', 'KIAA1161', 'NUCB2', 'CPEB2', 'B3GAT1', 'ARHGDIA', 'ATPAF1', 'NDUFA6', 'NAPSB', 'KRT75', 'SLC23A3', 'ZNF454', 'EGFL7', 'FAM90A7P', 'GLB1L2', 'OR1G1', 'IFNW1', 'RASGEF1C', 'RAD52', 'PPID', 'CAST', 'CPEB4', 'ZNF542P', 'OPLAH', 'OR6C2', 'FAM104B', 'NFU1', 'ZNF175', 'SNORA22', 'CIDECP', 'CCDC60', 'OR6M1', 'TPP2', 'POSTN', 'NDUFB3', 'GBP1', 'NUMBL', 'SAA3P', 'MMEL1', 'ADRBK2', 'ABHD6', 'REXO1L6P', 'PAX1', 'RPL36', 'ZNF480', 'EXD3', 'RNMTL1', 'PDGFB', 'KIAA0895', 'PCDH7', 'PTPRJ', 'MYO1B', 'GPR63', 'PF4', 'NDST4', 'FTH1', 'PIGL', 'PARVG', 'BCL2L2', 'MRPL41', 'PRR15L', 'DNPH1', 'ZNF732', 'PROKR1', 'CKB', 'PSRC1', 'JMJD1C', 'REEP1', 'DHFR', 'TCIRG1', 'EML1', 'UGDH', 'SPANXN4', 'TRPV2', 'HMG20B', 'YIF1A', 'PSMD11', 'TRIM64', 'NCEH1', 'B3GALT4', 'ACTR3BP2', 'LINC00174', 'KRT33A', 'SMG1P3', 'COL6A5', 'FERMT2', 'HIST2H2BE', 'THUMPD2', 'CENPO', 'GTPBP10', 'C12ORF66', 'LINC00200', 'RABEPK', 'CATSPERG', 'SLC2A12', 'NXF4', 'OR2A1', 'PDSS2', 'GOLGA6D', 'LOC100240735', 'SNORA54', 'SDC3', 'PPP2CB', 'CELA2A', 'NLRP10', 'CADM2', 'PHF11', 'ZNF417', 'ARFRP1', 'BTN2A1', 'LYSMD2', 'ZNF775', 'KLF14', 'NEUROD2', 'ODF2', 'NTHL1', 'C2ORF50', 'GLIDR', 'SPTLC2', 'CD40', 'MRGPRX2', 'CCDC137', 'OR5H15', 'GUSBP5', 'LAMP2', 'PLCB2', 'CYP3A5', 'LINC00526', 'GTF2B', 'RPS27L', 'LOXL3', 'C12ORF49', 'GLTSCR1L', 'KYNU', 'KLHL24', 'KCNMB3', 'EIF4G1', 'LAT2', 'RAD51B', 'CXORF66', 'TCHHL1', 'CR1L', 'CSRP1', 'YBEY', 'VIMP', 'OLFM3', 'OR2C1', 'TPTE', 'SLC35D2', 'BTG4', 'LGALS7', 'PPP2R1A', 'TAGAP', 'ATP6V1D', 'SLC6A11', 'CLTA', 'ISM2', 'SNX7', 'GJA5', 'CCER1', 'LINC01600', 'TOMM6', 'SULT4A1', 'LECT2', 'PRDX1', 'SSU72', 'SAFB2', 'SNORD116-28', 'MMP16', 'ERAP2', 'SLC9B2', 'SLC25A21', 'LOC152225', 'SZT2', 'PRSS23', 'LINC00523', 'SOWAHA', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.7526080097821596 Spearman Correlation: 0.7322328344130922 Coefficient of Determination: 0.5664181206369185 RMSE: 0.3087629995638983 NRMSE: 0.08332627158333444 MAPE: 182.22927456208865 Pearson Correlation: -0.000323310550237278 Spearman Correlation: 0.20054863526976646 Coefficient of Determination: -2.0018322233186808e+27 RMSE: 18655980308833.426 NRMSE: 9026330199160.76 MAPE: 1176373163290059.2 Predictor: ElasticNet Pearson Correlation: 0.636538044115336 Spearman Correlation: 0.6375454668560024 Coefficient of Determination: 0.37852164519778864 RMSE: 0.36966019928067084 NRMSE: 0.09976067793847226 MAPE: 190.93584758305911 Pearson Correlation: 0.5182095449418149 Spearman Correlation: 0.5138492998665819 Coefficient of Determination: 0.238439619685606 RMSE: 0.3638785101120492 NRMSE: 0.17605548088485282 MAPE: 222.12385206600592 Predictor: RandomForests Pearson Correlation: 0.5521708355158066 Spearman Correlation: 0.5334351377694883 Coefficient of Determination: 0.2749957921527384 RMSE: 0.3992638159404493 NRMSE: 0.10774984440312546 MAPE: 244.43423267726504 Pearson Correlation: 0.5137842111640327 Spearman Correlation: 0.509860496667371 Coefficient of Determination: 0.21689747139000082 RMSE: 0.3689891108158838 NRMSE: 0.17852814480844373 MAPE: 225.33352651657515
Min-Max
random_genes.clear()
scenario = Scenario.NRandomGenes_Mutations
normalizeTechnique = NormalizeTechnique.MinMax
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.266811 | 0.102965 | 0.232299 | 0.000000 | 0.0 | 0.00000 | 0.165596 | 0.256402 | 0.0 | 0.00000 | ... | 0.362558 | 0.154626 | 0.343226 | 0.136973 | 0.283236 | 0.203583 | 0.106969 | 0.050188 | 0.019658 | 0.021305 |
| TCGA-A1-A0SH-01 | 0.074647 | 0.046655 | 0.060467 | 0.000000 | 0.0 | 0.00000 | 0.019946 | 0.108076 | 0.0 | 0.00000 | ... | 0.437102 | 0.171136 | 0.196632 | 0.028737 | 0.498917 | 0.208787 | 0.168174 | 0.119445 | 0.172767 | 0.000000 |
| TCGA-A1-A0SJ-01 | 0.122769 | 0.097168 | 0.035285 | 0.088368 | 0.0 | 0.00000 | 0.020200 | 0.129369 | 0.0 | 0.29443 | ... | 0.415293 | 0.914898 | 0.215818 | 0.074090 | 0.379839 | 0.104565 | 0.110857 | 0.079787 | 0.016343 | 0.000000 |
| TCGA-A1-A0SK-01 | 0.716855 | 1.000000 | 0.116251 | 0.076144 | 0.0 | 0.01449 | 0.000000 | 0.094313 | 0.0 | 0.00000 | ... | 0.334733 | 0.181185 | 0.763246 | 0.229344 | 0.511470 | 0.000000 | 0.246798 | 0.166438 | 0.018601 | 0.000000 |
| TCGA-A1-A0SQ-01 | 0.025757 | 0.011574 | 0.044865 | 0.000000 | 0.0 | 0.00000 | 0.022276 | 0.153652 | 0.0 | 0.00000 | ... | 0.537294 | 0.183640 | 0.239462 | 0.036770 | 0.323545 | 0.099038 | 0.071604 | 0.075950 | 0.006561 | 0.000000 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 371 x_train columns: ['PRAMEF4', 'INS-IGF2', 'DNAH17', 'RGSL1', 'FAM153B', 'B4GALT5', 'OPN4', 'HIST1H1A', 'PYGO2', 'DDX46', 'CUL3', 'AMPD2', 'ACAD9', 'HKR1', 'TMEM50B', 'PLIN5', 'CYLC2', 'KLRC2', 'MMP7', 'GPN2', 'CYB5D2', 'VPS35', 'B4GALT1', 'SNORD116-25', 'NCR3', 'LOC493754', 'STRN3', 'ENG', 'PAQR3', 'HES2', 'ZNF208', 'LINC00599', 'HYAL1', 'ITGA2', 'RASSF4', 'CD55', 'WDR86', 'FAM99A', 'GTF2IRD1', 'A1CF', 'CPSF2', 'BNIPL', 'LOC100129935', 'SSBP4', 'PPAP2B', 'GYG1', 'HRG', 'NEUROG2', 'DAPP1', 'MCTS1', 'VBP1', 'ZMYND15', 'SCARNA15', 'KLF15', 'SNORD115-25', 'LEPROT', 'ZNHIT1', 'GGTLC1', 'BTBD16', 'TAS2R10', 'RNASE2', 'CT45A2', 'KDM3A', 'OR2D2', 'TARBP1', 'MSANTD1', 'PIGG', 'ADGRG5', 'SAPCD1', 'METTL6', 'SYNGR3', 'KIAA1715', 'ANGPTL7', 'RPL15', 'FSD2', 'GNS', 'GALNT3', 'FYN', 'DUXA', 'CYP46A1', 'C16ORF92', 'GRIK1-AS1', 'NLRP4', 'PRDM1', 'CAB39L', 'TEX13A', 'SDK1', 'SAMM50', 'SLC6A8', 'RASL10B', 'RNF103', 'DAD1P1', 'CEBPZ', 'SIGLEC10', 'SSFA2', 'BNC1', 'SUCLA2', 'OR5D18', 'PBDC1', 'IL12RB1', 'C19ORF80', 'OR13G1', 'ALOX5', 'PAK6', 'IFI30', 'KLHL4', 'SOST', 'WIPI1', 'SLC18B1', 'SNORA81', 'A2ML1', 'OR2B11', 'CCDC91', 'ALDH1L2', 'ABCC9', 'RDH14', 'SNORD116-23', 'SYT12', 'OR3A1', 'TGM7', 'KCNK13', 'USP45', 'RXFP1', 'FTHL17', 'ASCL3', 'TVP23B', 'TM2D2', 'LRRC37A', 'POLL', 'MRPL50', 'ABCA12', 'SOX8', 'MXRA5', 'ZNF337', 'HNRNPA3', 'PCED1A', 'SLC6A2', 'HPYR1', 'NEFH', 'MED29', 'RAB3C', 'DNAH11', 'UHMK1', 'EFNA2', 'XKRX', 'POTEM', 'PCDHB17P', 'PAQR9', 'LOC285847', 'ZNF845', 'BRSK2', 'RPL32', 'IARS2', 'TRIML2', 'BOP1', 'ZNF221', 'PRSS3', 'TMCO4', 'HIST1H2AJ', 'LAMA5', 'INTS12', 'PKHD1L1', 'SGOL2', 'RNY4', 'ZNF609', 'CYP1B1', 'WDR90', 'EBAG9', 'FIBP', 'ZSWIM6', 'CMTM5', 'SH3PXD2A', 'ATXN10', 'BCAR3', 'MAP3K10', 'KIAA0556', 'ARSH', 'CKLF', 'OR9A2', 'ATP13A5', 'HBA2', 'C17ORF89', 'AKAP14', 'TMED6', 'SPCS2', 'FAH', 'KRT14', 'FBXO16', 'PSMB6', 'CCL4L1', 'KRT222', 'PER1', 'FOXA1', 'SORCS1', 'DAZ4', 'OR4F17', 'MUC13', 'MRPS18B', 'PCNXL3', 'CLDN18', 'GPR37', 'CCL19', 'RFPL3S', 'LRRC3', 'FOXE1', 'DHCR7', 'UGT2B28', 'PLOD3', 'TAS2R7', 'RP1', 'RTN4RL2', 'ANPEP', 'KLHDC4', 'CAPRIN1', 'TIFA', 'SCARNA9L', 'VTI1A', 'FAM157B', 'MYO1C', 'RABL2B', 'ERICH3', 'DDX27', 'NKIRAS1', 'PHKB', 'CECR5', 'TWISTNB', 'DNM1L', 'XRCC6BP1', 'LRRC57', 'PPP1R36', 'CYBRD1', 'SSX2IP', 'HIST1H2BH', 'RBBP8NL', 'CCDC50', 'CABIN1', 'NUP133', 'UFSP2', 'RASA2', 'MAL', 'COL23A1', 'NOL4', 'TMEM235', 'GPR143', 'CCDC69', 'PHLDA2', 'MIER1', 'GFOD2', 'CDC20B', 'NDUFB6', 'THBS2', 'USP43', 'ANKRD28', 'PNPT1', 'CT45A5', 'SAV1', 'GP5', 'SPTSSB', 'TBCE', 'TAF1C', 'CACNB2', 'FAM169B', 'CYP1B1-AS1', 'ZNF584', 'C4ORF33', 'NEK1', 'SNRPD2', 'RPL8', 'DUSP9', 'PMS2P5', 'HPD', 'PIK3CG', 'SLC28A2', 'SYPL2', 'HMMR', 'TRIT1', 'GEMIN7', 'OR6A2', 'ADTRP', 'B4GALT2', 'MFSD4', 'REC114', 'SLC25A12', 'DMWD', 'C18ORF8', 'ANKAR', 'WASH2P', 'RANBP10', 'BEND3', 'TTC29', 'CXORF40B', 'SYNGR1', 'HSPA5', 'PTPN5', 'TMEM176B', 'EVI5', 'ZNF385D', 'VWCE', 'KAT2B', 'PLK1', 'ZNF34', 'VPS33B', 'MAL2', 'ODF4', 'UBXN1', 'C16ORF52', 'ATAD3C', 'FGF20', 'ARHGAP44', 'GCC2', 'DNAJC6', 'KCNIP4', 'SPP1', 'TXLNB', 'DDX28', 'CYP21A2', 'ASF1B', 'EXOC3L4', 'ZW10', 'CLSTN2', 'INF2', 'ZMAT5', 'LYZL4', 'OR4B1', 'CALCA', 'ZNF79', 'ADCY9', 'SLC5A7', 'INO80C', 'SLC5A6', 'XKR8', 'ZNF570', 'TBC1D14', 'DOCK2', 'HAVCR2', 'PLCB3', 'NUDT16L1', 'SLCO2B1', 'HIST1H4J', 'UBA2', 'HK2', 'MLH1', 'MAATS1', 'DUSP16', 'CACNA1S', 'ARHGEF9', 'IRF2', 'MYO1D', 'BPIFA4P', 'EPHB3', 'HIST1H4K', 'LRRC3B', 'NHLH2', 'TGOLN2', 'ISG15', 'C1RL-AS1', 'XKR4', 'SAA3P', 'HDHD1', 'NBN', 'MAPRE1', 'LPGAT1', 'AMER2', 'ATP8A1', 'FLJ25758', 'GRXCR1', 'IPO5', 'ZNF502', 'NCL', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.8215042063016406 Spearman Correlation: 0.7344015266650279 Coefficient of Determination: 0.6748666043841947 RMSE: 0.1277839745212333 NRMSE: 0.04839385514911316 MAPE: 465.0501675175742 Pearson Correlation: 0.012607948216521043 Spearman Correlation: 0.1126524241537411 Coefficient of Determination: -19.752366852290567 RMSE: 1.2776574374446943 NRMSE: 0.6311819494053018 MAPE: 905.3886350107338 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: RandomForests Pearson Correlation: 0.5860324521694004 Spearman Correlation: 0.4876681471874702 Coefficient of Determination: 0.1755180747877797 RMSE: 0.2034867670189241 NRMSE: 0.07706372543795648 MAPE: 211.33550376667526 Pearson Correlation: 0.16632649398469643 Spearman Correlation: 0.29238610867232473 Coefficient of Determination: 0.002654210803174184 RMSE: 0.2800937954387884 NRMSE: 0.13837053864372545 MAPE: 124.3619242621769 Protein: CDH1 x_train_column_count: 836 x_train columns: ['TM9SF1', 'PPP1R3E', 'SNX4', 'ARHGAP5-AS1', 'LEMD2', 'PROCR', 'BRAF', 'PTGER3', 'ZFY', 'SNORD38A', 'CYP1B1', 'FMN1', 'IGLL1', 'ATP1B1', 'VILL', 'E2F5', 'GLOD5', 'HGSNAT', 'LYRM1', 'VWF', 'EIF2B2', 'SOX17', 'RPUSD4', 'GBF1', 'FCHSD2', 'HIST1H3D', 'C3ORF79', 'E2F6', 'CYBB', 'BRINP2', 'DLK2', 'C20ORF195', 'TAT', 'SRSF5', 'TRIP11', 'TAGLN2', 'CYP2B7P', 'RAP1B', 'ADGRG5', 'COLQ', 'C9ORF78', 'OR2A25', 'MEFV', 'ARX', 'MYLK', 'CLCA3P', 'ATF7IP', 'CSGALNACT2', 'C16ORF54', 'GALE', 'ABHD12B', 'CCNT1', 'TMEM50A', 'CCDC74B', 'ASTN1', 'LINS', 'CAP1', 'CCL20', 'MYO1D', 'C7ORF73', 'TAP2', 'PEBP1', 'SV2C', 'GEN1', 'ADA', 'NCF1', 'ASIC4', 'AIFM2', 'DGCR11', 'TAF6', 'MRPL28', 'NPTX2', 'PRR23C', 'C17ORF82', 'BPIFB6', 'SULT2B1', 'C17ORF97', 'FAM155A', 'GIPC1', 'LINC01098', 'VWA5B1', 'ZNF446', 'ZNF280B', 'LGALS9C', 'FGF16', 'SPTLC3', 'PHF12', 'USH2A', 'ARMC1', 'SLC26A3', 'C2ORF48', 'ZFYVE16', 'SUMO1P1', 'RAB2B', 'SIGLECL1', 'LINC00602', 'COL27A1', 'ANPEP', 'DGKQ', 'AQP3', 'GP1BA', 'SNORD116-23', 'CCDC54', 'EPHA4', 'PARD6G', 'SLC16A14', 'CYB5B', 'DOC2B', 'TCEAL3', 'GSPT1', 'OR51G2', 'FAM98C', 'ANKS4B', 'RGS10', 'GPR141', 'ASB16-AS1', 'TMEM163', 'PCNA', 'PRSS48', 'SNHG12', 'GABRB2', 'PMS2CL', 'BZRAP1', 'SI', 'LPCAT2', 'PRRC1', 'HECW2', 'RHBDD1', 'TYROBP', 'PRKAR1B', 'ZNF462', 'TP73', 'TXNL4B', 'GPER1', 'TIMD4', 'NEUROD2', 'CEP162', 'SNORD68', 'OSBPL10', 'PRDX3', 'BTLA', 'GRK6', 'GHRLOS', 'CD209', 'HGH1', 'RNPS1', 'LCN12', 'NBEAL2', 'ZNF594', 'SPACA1', 'IL2RB', 'RBP7', 'ZNF571', 'WASH7P', 'PTPN11', 'HAR1A', 'THUMPD3-AS1', 'SEMA4C', 'CCDC121', 'LBP', 'CNFN', 'PPP3CC', 'CRSP8P', 'SKIV2L', 'GNE', 'ANAPC4', 'TBX15', 'TOMM40L', 'PSORS1C1', 'SPATA2', 'CPEB2', 'THAP10', 'OR6C70', 'CALB2', 'LOC399815', 'EXOSC8', 'CNTNAP3', 'KLC4', 'IDH3B', 'SNTB1', 'RBMY1A3P', 'PPP2R3B', 'TMEM248', 'PTGR1', 'KRT37', 'LDOC1', 'BIRC3', 'SCFD1', 'LRWD1', 'NIPA2', 'NXNL2', 'SSBP1', 'WDR91', 'TNNI3K', 'KCNJ8', 'TRANK1', 'ARHGEF26', 'AGPAT9', 'ALDH16A1', 'ZCCHC10', 'NUP54', 'TMEM200C', 'SELK', 'SNORA52', 'GLRX3', 'SENP3', 'NDUFB9', 'PIAS1', 'PPAT', 'ZNF280A', 'SBSN', 'EPG5', 'MTERF4', 'RNF165', 'CST13P', 'SCRN2', 'TSPAN18', 'TBCK', 'KRTAP17-1', 'OR8I2', 'SGCZ', 'POLR1C', 'ENAH', 'LOC100132287', 'SNORD45B', 'DHX57', 'LOC100129935', 'ATP6V1G1', 'SLC44A5', 'RPS26', 'FAM179B', 'AGMAT', 'ZNF350', 'INSL5', 'GYS1', 'PPP2R5E', 'SUSD6', 'OR4C13', 'FAM102B', 'CEL', 'NUP85', 'KIAA1919', 'KIAA0020', 'IL21', 'ZNF207', 'COL11A1', 'ZNF638', 'MEIS2', 'ABCB5', 'C12ORF57', 'FOXL2NB', 'PURA', 'TAS2R46', 'VGF', 'TMEM55A', 'CRLF1', 'NUTM2A-AS1', 'LY86', 'COL6A4P1', 'LIN52', 'EPHB3', 'DHRS4-AS1', 'CHD1', 'DHH', 'ENO3', 'SAMM50', 'GAD2', 'SRP54', 'ZBTB1', 'IQSEC3', 'RPS6KA6', 'OIP5-AS1', 'BCO1', 'CAPN5', 'DUSP21', 'MRPL3', 'DPH7', 'DTHD1', 'PCDH17', 'DNAH5', 'PRIMPOL', 'ACAA2', 'RASSF2', 'CUL5', 'PCGEM1', 'TTTY11', 'BAZ2B', 'NCLN', 'ARHGEF18', 'DENND1B', 'AGT', 'ALDOA', 'GGT8P', 'KCMF1', 'CXXC5', 'SLC10A5', 'USP34', 'MARCH4', 'MAB21L3', 'STEAP1B', 'MTMR6', 'NEK2', 'SSTR4', 'NCBP1', 'ZBTB34', 'LRAT', 'DAW1', 'ZNF160', 'DLX6-AS1', 'PKIA', 'PAX6', 'PHGR1', 'ARHGAP11A', 'ATG7', 'LRRC37BP1', 'LEAP2', 'C9ORF142', 'ZNF415', 'RPRM', 'PAQR4', 'WDR93', 'ZNF280C', 'STEAP2', 'EPS15', 'SH3BP2', 'IFI6', 'PKLR', 'CDH19', 'SNORA65', 'KRT73', 'STAT6', 'KDM5A', 'SLC32A1', 'THAP5', 'MXRA7', 'FAM86JP', 'ALDH9A1', 'TGS1', 'FAM74A1', 'ZNF530', 'SPATA8', 'NPLOC4', 'GPR87', 'CHN1', 'TIMM8B', 'DOK5', 'BBS7', 'EIF6', 'TTL', 'SLC36A4', 'PRF1', 'ABRA', 'UBXN2A', 'EIF1AX', 'EIF2B4', 'MRPL1', 'GTF2H1', 'ABCG5', 'IGF2BP2', 'SEPT9', 'CSDE1', 'RFPL4B', 'AQP12B', 'MED25', 'AQP2', 'USP38', 'SDHAF3', 'ADD1', 'KIF26B', 'ATAT1', 'STAT3', 'ASB11', 'SEC23B', 'HERC1', 'IFNA13', 'HTN1', 'ZNF680', 'CYTIP', 'PIGO', 'BCL10', 'LDB1', 'MXRA8', 'METTL7A', 'GRM7', 'TCF19', 'PTGFR', 'ARSB', 'RAB15', 'ROS1', 'OIP5', 'ALPPL2', 'MAGI2', 'JMJD1C', 'FCHO2', 'SLC25A42', 'SERINC4', 'DICER1-AS1', 'BCL9L', 'COPS5', 'KRT80', 'CAV3', 'GGT3P', 'FHDC1', 'SH2D7', 'BCORP1', 'PDLIM5', 'ARSG', 'H1FX', 'DYTN', 'ZFP30', 'LOC100130331', 'NOL4', 'ATP5G1', 'LTBP2', 'CLDN7', 'ZNF587', 'ASB6', 'MAVS', 'DDT', 'COL1A2', 'HHIPL2', 'WFDC2', 'ZBBX', 'SCN1A', 'NIPAL4', 'SEPT2', 'RFT1', 'PFN4', 'OR52K2', 'RAB3A', 'H2AFX', 'LINC01128', 'COMMD5', 'EML4', 'MAGEA6', 'C2ORF50', 'COX19', 'EXOC5', 'TRIM13', 'CAPNS2', 'CNTN6', 'SNAP23', 'TCTA', 'HRASLS', 'UNC93A', 'REEP5', 'TDRD1', 'SNORD121A', 'HES5', 'MAP3K13', 'GNPDA1', 'VDAC3', 'FBXO6', 'TRAF4', 'RASSF8', 'TRIM66', 'C7ORF69', 'AOX1', 'GATS', 'THRSP', 'ARNT', 'AKAP3', 'CCNA2', 'SLC2A11', 'GSKIP', 'GSTM2P1', 'AMBRA1', 'SNORD123', 'FARP2', 'PTK6', 'SNX6', 'SVIL', 'TPD52', 'SH2D1A', 'MATN1', 'PLD5', 'SPAG11A', 'PTPN9', 'LDAH', 'MFN1', 'ADCK2', 'SNORD49A', 'MEOX2', 'TMEM167B', 'EVA1A', 'GPR52', 'SNORD1A', 'TTTY17B', 'CX3CL1', 'DOCK10', 'MTA3', 'SDF2', 'EMB', 'SFT2D3', 'SESN1', 'SMYD1', 'CLCN4', 'LRP12', 'WFDC11', 'SOX5', 'SLC25A14', 'ARHGAP1', 'SPATA25', 'ZNF781', 'STC2', 'PXDN', 'KIAA0226L', 'SYN3', 'TBCE', 'LILRA5', 'ABCA2', 'RNF19A', 'RSPH3', 'AATBC', 'ARID2', 'TPM1', 'ABHD2', 'C10ORF105', 'SNORD115-17', 'TRIP12', 'GSS', 'LOC344967', 'ZNF527', 'SLC26A11', 'KIF3C', 'HEG1', 'CLTCL1', 'RASGRF1', 'CLU', 'CCDC38', 'SLC26A4', 'CKM', 'THNSL1', 'XYLT2', 'CD3E', 'IKZF5', 'PCSK6', 'IGFBP2', 'ACOT1', 'SPPL3', 'SNX25', 'UNC13D', 'GSTO1', 'MRPS22', 'TBC1D3P2', 'KANSL2', 'ARRDC4', 'C16ORF46', 'KANSL1', 'APBA2', 'DIO3', 'GSTT1', 'LOC284578', 'ARHGAP35', 'PLN', 'CNOT3', 'DPY19L2P2', 'C1QTNF8', 'PHAX', 'NPAP1', 'CRELD2', 'KDM4A', 'SCN1B', 'ZNF770', 'WNT8A', 'AEN', 'HTT', 'KLHL33', 'SNAP29', 'MTCH2', 'AMDHD2', 'LMO3', 'AHCYL2', 'REXO1L6P', 'TTC21B', 'SNORA71C', 'XBP1', 'ATP6V1C1', 'RAB35', 'TMEM2', 'KLHL25', 'GPR3', 'SDF4', 'FCMR', 'FERD3L', 'KRTAP4-11', 'TMEM263', 'SETMAR', 'MRC2', 'ABLIM3', 'EDEM1', 'GPR160', 'TRNT1', 'HRASLS2', 'EMCN', 'NR1I2', 'PLIN3', 'TCEA2', 'KRT74', 'C10ORF32', 'NEIL3', 'TRAPPC11', 'DENND6A', 'ZNF830', 'C18ORF8', 'TRAPPC3', 'TSHZ3', 'GTPBP4', 'DCAF12', 'ZNF697', 'C1QTNF9B-AS1', 'KLHL40', 'HLA-J', 'NIPAL2', 'CYP26B1', 'SNORD45A', 'CTDSPL2', 'PRR19', 'PSMD5', 'AMER1', 'CCDC168', 'PNRC1', 'C2ORF54', 'CALHM1', 'CATSPERG', 'KCNMB3', 'FAM73A', 'SNORD79', 'PHOSPHO1', 'NXPH3', 'IFT27', 'SMCO1', 'VNN1', 'FBN3', 'GNA12', 'GNPTAB', 'RAVER2', 'TFCP2', 'HMP19', 'TMEM261', 'RNASE6', 'KCNN2', 'REST', 'GTSE1', 'SAYSD1', 'CCDC66', 'UBE2C', 'C8ORF82', 'POLR3GL', 'C6ORF1', 'TARS', 'CDHR5', 'FCRL2', 'EED', 'MAN2C1', 'ISX', 'SCD5', 'AGFG1', 'TRPT1', 'ULK1', 'TLE4', 'RRP1', 'LANCL3', 'SCARNA20', 'UBE2DNL', 'TNFRSF10D', 'TMEM201', 'ZC3H12C', 'GNPAT', 'LINC01551', 'CSN3', 'ZNF675', 'EMBP1', 'OR6C6', 'CD24', 'COL11A2', 'TMEM177', 'CAD', 'GNAS-AS1', 'A2M-AS1', 'ACTN1', 'TRIM10', 'C1R', 'MTHFR', 'LOC100128288', 'ILDR2', 'OMG', 'GLP2R', 'TSEN54', 'VPS36', 'RPSAP9', 'UNC5D', 'MED12', 'ABCC10', 'AWAT2', 'SNORD113-7', 'CBX2', 'LOC647859', 'SPEF1', 'LINC00298', 'OR51F1', 'SLC25A1', 'RPL31P11', 'XPO6', 'NANS', 'TBC1D2B', 'APMAP', 'LYSMD3', 'ZNF804B', 'ANGPTL5', 'UBE2V2', 'ABCA9', 'SLC7A2', 'FBRSL1', 'PRPF3', 'DCDC2', 'TIMM21', 'LRRK1', 'PLCD3', 'GNAI3', 'TEX10', 'PRMT6', 'ERMP1', 'SERPINA7', 'E2F7', 'TSR2', 'POR', 'DIRC1', 'POU6F2', 'GCNT1', 'ELL3', 'SYTL5', 'MBOAT2', 'MCPH1', 'PHLPP1', 'SNCG', 'MMP7', 'ARFGAP3', 'CALCOCO1', 'SORBS1', 'SDHD', 'PEA15', 'G3BP2', 'MLH1', 'RBMY1A1', 'C10ORF107', 'METTL7B', 'FDX1L', 'DHODH', 'HIRIP3', 'RBMXL3', 'SCNN1G', 'MGAM2', 'SEC14L3', 'HHIPL1', 'HOXB13', 'FASTKD5', 'C17ORF105', 'CLTC', 'HEPHL1', 'CSN1S1', 'KRT81', 'TSPAN17', 'JAM2', 'ANKRD34C', 'C9ORF116', 'RASSF4', 'FER', 'RAB6C', 'CLEC1A', 'NT5C3A', 'CEP131', 'RFPL1S', 'RTP4', 'TBC1D3H', 'NEDD9', 'MYO9B', 'FAM46A', 'CSRP1', 'ACER1', 'PIFO', 'FGD3', 'TTTY9B', 'BACE1', 'COQ3', 'PZP', 'CCL27', 'MBTPS2', 'CEP350', 'SAP30L', 'PIGA', 'LOC340017', 'CTRB2', 'RPS6KA2', 'CHRNA9', 'RXFP2', 'BCL3', 'TRADD', 'OR4K17', 'UBALD1', 'HYPM', 'MAP3K4', 'LINC00879', 'DNAH7', 'ATG5', 'SNORD18B', 'CYP2B6', 'SFTPA2', 'PQBP1', 'GPR156', 'MED14', 'UPF3B', 'ATG101', 'ZNF628', 'SUSD5', 'PLEKHG7', 'C7ORF31', 'DCST1', 'SERPINB1', 'CHAC1', 'SLC6A1', 'PDIA6', 'SELV', 'CD19', 'RBM41', 'TAF8', 'CYB5D2', 'TUSC5', 'RFESD', 'ATP13A2', 'HOXB1', 'ECHDC1', 'CADM4', 'INTS8', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 4.707560885598955e-15 NRMSE: 7.912797952026212e-16 MAPE: 6.305122566849051e-12 Pearson Correlation: 0.34426827143632915 Spearman Correlation: 0.35586772022241736 Coefficient of Determination: -1.7902965265375368 RMSE: 1.93819496036581 NRMSE: 0.3139183959647906 MAPE: 853.2072823861743 Predictor: ElasticNet Pearson Correlation: 0.6636745820305083 Spearman Correlation: 0.637674563569765 Coefficient of Determination: 0.336767064961486 RMSE: 0.9189846210690533 NRMSE: 0.1544693696853501 MAPE: 406.374879139073 Pearson Correlation: 0.6967901894242848 Spearman Correlation: 0.6568383572334406 Coefficient of Determination: 0.3703716417624179 RMSE: 0.9206921088815038 NRMSE: 0.14911925575483526 MAPE: 244.14549887660607 Predictor: RandomForests Pearson Correlation: 0.7526977440056655 Spearman Correlation: 0.6961781276239131 Coefficient of Determination: 0.5605708364426705 RMSE: 0.7480310745585702 NRMSE: 0.12573430059983026 MAPE: 249.25302049160365 Pearson Correlation: 0.7713020571027094 Spearman Correlation: 0.7247228620662666 Coefficient of Determination: 0.5895574127169503 RMSE: 0.7433588034443037 NRMSE: 0.1203975905290246 MAPE: 141.24744887711108 Protein: CDH2 x_train_column_count: 474 x_train columns: ['ZDHHC18', 'KIR2DL3', 'NQO2', 'GRK7', 'DNAH10', 'ATP6V1C2', 'ZBTB6', 'BAIAP2L1', 'ADCK3', 'SNORD114-16', 'UNC79', 'METTL12', 'FGL2', 'MUTYH', 'CMTR2', 'KPNA7', 'PNPLA6', 'RBM7', 'ERMARD', 'ASCC3', 'WNT16', 'MOGAT1', 'GCM1', 'PLA2G4F', 'ZPR1', 'FAM177B', 'LRIT3', 'SLC25A19', 'TLL1', 'SYT17', 'C4ORF32', 'RPL27', 'TTTY21', 'ACSM4', 'MGAT5', 'MRPL27', 'BTN1A1', 'KLK10', 'HAVCR1P1', 'EIF4E2', 'TSTD1', 'LOC646813', 'FILIP1L', 'SNHG10', 'DSCAM', 'LINC00928', 'RAET1E', 'PPAT', 'ZPBP', 'HAPLN2', 'CUX1', 'CIB2', 'NINJ1', 'H3F3AP5', 'UNKL', 'BAZ2B', 'NAB1', 'SSTR5-AS1', 'PRSS58', 'GPR85', 'RABGGTA', 'FJX1', 'TMED7-TICAM2', 'GBA3', 'LMBRD2', 'C5ORF63', 'KGFLP1', 'AKAP6', 'NXF2B', 'RORB', 'KIF3B', 'DACH2', 'RCC2', 'MMP12', 'LINC01341', 'CXCL13', 'AUNIP', 'ORMDL2', 'PRSS41', 'PLAG1', 'TEX15', 'MLIP', 'TLR9', 'ZFP69B', 'AMZ2P1', 'COCH', 'ZNF624', 'LYZL4', 'CRABP2', 'TMX3', 'PGAM1', 'SNORA15', 'C19ORF48', 'PRNT', 'CHCHD6', 'LINGO2', 'FLVCR2', 'AVPI1', 'STRA13', 'SELM', 'RPAP2', 'CLYBL', 'CHCHD10', 'PCDHA7', 'RPL14', 'MOCS1', 'ZNF619', 'FLJ13224', 'UBE2L3', 'FKBP3', 'KIAA2022', 'IRGC', 'CHRFAM7A', 'SEPT10', 'LRR1', 'TRIM3', 'CSTF3', 'SSTR2', 'SNCG', 'C20ORF195', 'FAM169A', 'SSX2IP', 'MICAL3', 'MRPS31', 'STAC3', 'DNAJC15', 'C11ORF84', 'CDC42SE2', 'NKIRAS2', 'PTPRVP', 'RBM12B', 'CMPK2', 'ABCC5', 'NVL', 'CACNB2', 'TACSTD2', 'NLRP8', 'HIST2H2AC', 'DNAJB6', 'INHBA-AS1', 'SNORD119', 'ZNF382', 'MS4A13', 'C1ORF116', 'MIB2', 'OPN5', 'LOC148709', 'TAX1BP1', 'LAMTOR1', 'ZNF564', 'CD300LG', 'GNB1L', 'PPDPF', 'OR2J2', 'LDLRAD2', 'S1PR5', 'PCDH7', 'NKTR', 'CTHRC1', 'PRSS33', 'RAB8B', 'LRRC57', 'FBXL22', 'RBP3', 'HHLA3', 'PDIA5', 'ECT2L', 'ARNTL', 'SNORD116-1', 'ITSN1', 'USP16', 'C9ORF171', 'EPM2AIP1', 'SMARCE1', 'BCL2L1', 'CDKN2D', 'APOC2', 'LINC00620', 'TUBB6', 'BPIFA1', 'MAD2L2', 'RPS23', 'OPHN1', 'NTM', 'SAP30L', 'MIS18A', 'MAPT-AS1', 'CPT1A', 'SLC26A2', 'ELF4', 'INSL5', 'PRKRIR', 'GSTZ1', 'CDC37', 'LYPLA1', 'UBE2D4', 'FAM71A', 'MRPL20', 'TPX2', 'C17ORF85', 'LINC00189', 'TCEAL1', 'SNORA70', 'C1QBP', 'MIR155HG', 'FAM84A', 'TEAD1', 'C6ORF163', 'MYOM2', 'ITGB3', 'CERCAM', 'TAF4B', 'TRA2A', 'RAB43', 'RNF17', 'GFRA1', 'EPC1', 'LINC00652', 'AQP8', 'RTCB', 'MYH7', 'ZNF784', 'DCANP1', 'RPS27L', 'TICRR', 'EHBP1L1', 'FAM228A', 'POMP', 'ELMSAN1', 'MTCL1', 'ARHGEF16', 'OR51G1', 'GOLGA6L6', 'ITGA3', 'RPL23AP53', 'PSME3', 'CMTM5', 'FAM179B', 'DRAIC', 'BDP1', 'LOC728554', 'ZNF565', 'USH1C', 'C5ORF28', 'DHCR7', 'TRIM50', 'HDX', 'FAM126A', 'RAD9B', 'GINS4', 'PCYT1A', 'RRAGA', 'PRDX5', 'RBM24', 'PCDHGA5', 'TNFSF4', 'GPD1L', 'GOLGA3', 'DLX3', 'SOSTDC1', 'FCN2', 'HSPB11', 'SPRY2', 'MBD5', 'TTTY1B', 'OR6C75', 'SMTNL1', 'PGPEP1L', 'SOD2', 'COL24A1', 'SNX24', 'MORF4L2', 'IL17RC', 'TNFRSF4', 'TAS2R13', 'IRF4', 'DKK2', 'SLC10A6', 'PITPNA', 'S100G', 'WDR72', 'ATP7B', 'HNRNPUL1', 'ADARB2', 'CAMKMT', 'SNORD29', 'HIF1A', 'CCDC113', 'POLD1', 'HSBP1', 'BPY2', 'BTNL9', 'OR4N4', 'FAM178B', 'PHLPP1', 'TAAR8', 'GID8', 'CDH11', 'PXT1', 'TM4SF1', 'CTNNA2', 'ANXA2R', 'PLAC1', 'TCP10L2', 'IL24', 'LINC01599', 'CGA', 'FOXN2', 'MESTIT1', 'SRD5A3', 'NCL', 'PITX3', 'CTAG2', 'PAX2', 'BCRP3', 'FAM201A', 'CAAP1', 'SNRPD3', 'ADAD1', 'SCAND2P', 'LIN52', 'CACFD1', 'FAM120B', 'LOH12CR1', 'C1ORF189', 'RBBP9', 'CYB561A3', 'TOB2P1', 'DNAJC10', 'SLC45A2', 'P4HB', 'OTUD5', 'LINC01558', 'PPRC1', 'PRG2', 'SNORD35A', 'LOC400043', 'MIPEP', 'GNB1', 'TULP2', 'TIMM9', 'FAM222A', 'DAPK3', 'PRR23C', 'DTNA', 'ARL10', 'CDHR1', 'SMC6', 'NLGN2', 'COA7', 'DNAI1', 'KCTD2', 'RNF169', 'RAD18', 'PURB', 'ADAR', 'IL17C', 'TSPEAR-AS2', 'PNPLA8', 'ADPRM', 'WFDC8', 'CD27-AS1', 'CMIP', 'ESCO2', 'TMEM141', 'CLCF1', 'CA5B', 'SNORD111B', 'STRADA', 'DPP4', 'COQ5', 'SLC22A9', 'SPOCK2', 'DYNLT3', 'ELMOD3', 'DCP2', 'UBE4A', 'ING2', 'PTGDS', 'SLC6A1', 'ERCC6L', 'OR6C2', 'FAM196A', 'PTPRU', 'HMGN3', 'LRRC47', 'RPL6', 'MAD2L1BP', 'GSR', 'KIF22', 'LINC00113', 'DKKL1', 'TRMT5', 'PPP3R2', 'RNF168', 'GLDC', 'TACR3', 'SRFBP1', 'SPATA2', 'ATG4B', 'DDX28', 'EFNB3', 'RBM28', 'XAGE5', 'SPATA20', 'TMEM241', 'ZNF735', 'C15ORF61', 'PSG11', 'FAM110B', 'RAD51D', 'LINC00298', 'SNORA8', 'CERS4', 'NPIPB5', 'KRT36', 'JADE2', 'PPP3CB', 'JRK', 'CDNF', 'SAP30', 'CCK', 'PDIK1L', 'MPP7', 'OR4L1', 'PAG1', 'SLC7A6OS', 'FMNL1', 'SAP30BP', 'STARD5', 'PNPLA7', 'PNLDC1', 'CYP2S1', 'LOC113230', 'DBR1', 'ZNF562', 'TMF1', 'HMGN2P46', 'HIST2H2BA', 'CIDEB', 'FAM58BP', 'LOC284441', 'CCDC150', 'SNAPC1', 'P2RY13', 'PALM2-AKAP2', 'TSSC2', 'KIAA1324L', 'TM9SF2', 'CHRNA3', 'AES', 'ZMYM4', 'COL19A1', 'NECAB1', 'LEPR', 'TCP11L2', 'LRRTM1', 'C10ORF131', 'HEPHL1', 'RTP5', 'CEACAM22P', 'LCN15', 'SPATA41', 'EFEMP1', 'GOLGA7', 'MCTS2P', 'S100A7L2', 'BASP1', 'FABP3', 'FOXD1', 'MTG1', 'SOBP', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.9066293571501927 Spearman Correlation: 0.8812299043662577 Coefficient of Determination: 0.8177090414598698 RMSE: 0.15848349980675125 NRMSE: 0.05854861881314997 MAPE: 2200.0499744888507 Pearson Correlation: -0.15821170437285154 Spearman Correlation: -0.10605306799336651 Coefficient of Determination: -13.877385060363013 RMSE: 1.4468640356738336 NRMSE: 0.7466914567135436 MAPE: 755.2134758107478 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: RandomForests Pearson Correlation: 0.5437228229850538 Spearman Correlation: 0.4634904034294969 Coefficient of Determination: 0.1919425374885647 RMSE: 0.33367418747744665 NRMSE: 0.12326938030915657 MAPE: 846.3405500864695 Pearson Correlation: 0.07706416743044166 Spearman Correlation: 0.12677299775631648 Coefficient of Determination: -0.007299295986484378 RMSE: 0.3764815388548647 NRMSE: 0.19429299626096128 MAPE: 115.84663493548584 Protein: CDH3 x_train_column_count: 75 x_train columns: ['DEK', 'NCSTN', 'PTGFRN', 'ARID5A', 'C11ORF54', 'ERP44', 'C10ORF95', 'NCK1', 'COL4A4', 'FIG4', 'PGBD2', 'ZBTB9', 'MYL9', 'OR4N5', 'SMPDL3A', 'MPP3', 'NRG4', 'ARHGEF10L', 'KRT24', 'ABCA11P', 'EVPL', 'KRTAP19-7', 'ZNF443', 'PRIMPOL', 'CHERP', 'TNFRSF11B', 'SH2D5', 'OR8G2', 'FGF21', 'TMEM155', 'FUT9', 'CTSS', 'ABCF1', 'SESN2', 'EEF2K', 'JAK3', 'LOC728323', 'TMEM194B', 'MYH9', 'ATP6V1C2', 'ITGA4', 'LOC646813', 'ZC3H11A', 'DCTN2', 'DIAPH3', 'HPN-AS1', 'DYTN', 'GLTSCR1L', 'OR5B17', 'ISLR2', 'IQCF3', 'MMGT1', 'KRTAP5-7', 'FRMPD1', 'EMP2', 'CELSR3', 'TCTEX1D1', 'NCAPH2', 'MTX1', 'COQ9', 'KLF2', 'GPR27', 'DDX11L2', 'PRRT4', 'FRA10AC1', 'LINC00202-1', 'CCR2', 'ADRA1D', 'CRHR1', 'MTMR8', 'CHRNB1', 'FBLN7', 'OR2T33', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.5322044836281461 Spearman Correlation: 0.5081431971496849 Coefficient of Determination: 0.2832410088327435 RMSE: 0.17677327021934544 NRMSE: 0.12402008630756121 MAPE: 729.9045760722189 Pearson Correlation: 0.5012440464520126 Spearman Correlation: 0.5320993073846454 Coefficient of Determination: 0.20635130977212224 RMSE: 0.18225350720356906 NRMSE: 0.1394964502403878 MAPE: 398.3367919146368 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: RandomForests Pearson Correlation: 0.565900991710726 Spearman Correlation: 0.5382276615011882 Coefficient of Determination: 0.24695189591505706 RMSE: 0.18119298563106537 NRMSE: 0.12712085762969733 MAPE: 341.90493904186275 Pearson Correlation: 0.4261019099256333 Spearman Correlation: 0.4586333040678958 Coefficient of Determination: 0.1627836385035495 RMSE: 0.1871891171584088 NRMSE: 0.1432741556960213 MAPE: 201.31782106500626 Protein: PTEN x_train_column_count: 886 x_train columns: ['MYCT1', 'CACNG6', 'ERCC1', 'UNC13D', 'LOC91450', 'WBSCR27', 'AADAC', 'EGFL8', 'ACBD4', 'LGALS12', 'EHF', 'ZNF155', 'KCNK16', 'CARD9', 'ATP5SL', 'PCDH20', 'OR51D1', 'KDELR2', 'LIPF', 'PIWIL4', 'ZRANB3', 'BAHD1', 'GRIK1', 'RINL', 'JADE3', 'IER2', 'SNORD116-3', 'FZD5', 'GNG7', 'TCEANC', 'KRTAP23-1', 'OR4C46', 'CLDN11', 'TMEM63C', 'PLK4', 'RAB34', 'TSG1', 'MPP5', 'NOX3', 'TNIP1', 'VCPIP1', 'RALBP1', 'IMP3', 'SYNDIG1', 'PRCC', 'PDHB', 'KPNA6', 'GOLGA7', 'SLC25A3P1', 'SUN5', 'R3HDML', 'HK2', 'PHF6', 'PIP4K2A', 'CROCCP2', 'SLC6A9', 'LINC00032', 'XPO6', 'FAM161B', 'HSBP1', 'ZNF676', 'SENP8', 'POLR3B', 'RFNG', 'GALNT13', 'MSX2P1', 'DMBT1', 'FAM98C', 'ADGRG3', 'CYP21A2', 'RP2', 'UNC5CL', 'YIPF5', 'SCGB1B2P', 'PADI1', 'TCAIM', 'RLN1', 'PGAP2', 'DGKD', 'SMAD6', 'CHIC1', 'TCEAL3', 'ST6GALNAC5', 'ISM1', 'PTBP3', 'PCDHGA2', 'CORO6', 'IER5', 'CENPP', 'KRT32', 'ZNF791', 'FER1L5', 'SMCR5', 'RPS2P32', 'GID8', 'ZDHHC13', 'GTPBP1', 'AARD', 'PCDHA4', 'SPRR2C', 'ZNF581', 'TMEM263', 'SPPL2A', 'SNAR-H', 'CARNS1', 'ARMT1', 'CAB39L', 'FAM179B', 'WNK1', 'XRCC4', 'PRR35', 'SH2D1B', 'LMOD3', 'REXO2', 'MRPL3', 'SIRT7', 'TTLL11', 'PRMT5', 'SLC8A3', 'XKR6', 'BCL2', 'PAX1', 'MMP1', 'GPIHBP1', 'DACT1', 'SYNRG', 'FOXM1', 'G6PC2', 'IQGAP3', 'GDPD5', 'DDC', 'MYO15A', 'MIA2', 'TMEM136', 'MPDZ', 'SLC6A1', 'COG3', 'LINC01591', 'ADGRF5', 'NKG7', 'ERGIC2', 'COX11', 'COX7B', 'SNORD114-20', 'PTGS2', 'SCCPDH', 'ST8SIA2', 'FAM162B', 'SMIM15', 'HS3ST1', 'ZBED2', 'TMEM59L', 'PRKCE', 'TMEM219', 'LOC645166', 'PDE3B', 'JAKMIP3', 'MIB1', 'RAB11FIP2', 'LAT2', 'DPH3', 'ZNF835', 'GPR19', 'SNX29', 'ZNF883', 'ESCO2', 'MRPS23', 'FFAR2', 'EEF2', 'ZDHHC17', 'SLCO6A1', 'IDH3A', 'GNB1', 'SEC63', 'ARFGAP1', 'VN1R4', 'WARS', 'SRSF8', 'CTSO', 'SLC32A1', 'SQRDL', 'TAF9', 'LINC00667', 'STARD3NL', 'CTDSP2', 'RPUSD4', 'TUBG2', 'LOC728392', 'ACPP', 'CACNG1', 'PSMA8', 'CDK5RAP3', 'GBA2', 'VPS51', 'XG', 'KLHL24', 'WDR60', 'SKAP1', 'DOCK2', 'MIR17HG', 'TMEM179', 'SNORD116-23', 'TBC1D3H', 'C9ORF64', 'C9ORF153', 'MAZ', 'NEU2', 'NT5C1A', 'FAM69B', 'ARMCX5', 'IL2', 'ZNF774', 'PDZD7', 'MS4A8', 'CEP290', 'ATXN7L3', 'IFI44L', 'MUL1', 'CCSER2', 'RUVBL1', 'CDH24', 'ZCCHC13', 'CRLF2', 'RHOBTB2', 'SLCO4A1', 'CSPG4', 'DYNC1LI1', 'TTTY17A', 'CPPED1', 'PRDX3', 'MORC1', 'TMCC3', 'GPR89A', 'C20ORF85', 'KDM3A', 'EXPH5', 'DNM3', 'MED1', 'TMEM156', 'KRT72', 'GSTZ1', 'HSFY1P1', 'C17ORF98', 'PEX11A', 'HLX', 'CIB1', 'LOC613037', 'TTC33', 'SPATA33', 'ZNF184', 'ARL14', 'LINC00298', 'EFHC2', 'PCDHB19P', 'OR10A4', 'POU4F1', 'FAM35A', 'DDX17', 'SLC25A20', 'AKNAD1', 'PPP1R1A', 'NELL2', 'VPS35', 'FBXO44', 'COX4I2', 'RPAIN', 'SLIRP', 'DNAJC1', 'STRADA', 'KCNQ3', 'BBC3', 'TFIP11', 'CLNS1A', 'ZNF514', 'MATR3', 'NHS', 'LINC00893', 'B4GALT7', 'PNISR', 'RBP3', 'MMAA', 'POC1B', 'HABP2', 'MGAM2', 'PVRL3', 'TFAMP1', 'SPNS2', 'DUSP4', 'PTDSS2', 'C1ORF95', 'SNF8', 'MOCS3', 'POLR2J', 'CCNB2', 'COA3', 'GIMAP4', 'SPAG4', 'BAK1', 'PAPOLG', 'TRAPPC2', 'GPR132', 'RCN3', 'ERLIN2', 'IQCJ', 'ISOC2', 'FDXR', 'RNF213', 'DCAF4L2', 'SMG1P3', 'MYBL2', 'WNK3', 'MB21D1', 'TRIM74', 'PLAA', 'PRL', 'FOXI1', 'GJB1', 'PIK3CD', 'TBCEL', 'C10ORF10', 'GALNT8', 'TTC31', 'RDH8', 'MEF2C', 'BAG3', 'SYT13', 'TMPRSS11D', 'MARCKSL1', 'C9ORF116', 'TCHH', 'MRPL21', 'TRAPPC1', 'ABCC10', 'MAGEA3', 'SNORD102', 'SPOP', 'BAG4', 'ZNF131', 'CARS', 'SPATA32', 'LINC01465', 'PCDH10', 'MEIS3P1', 'PTCD3', 'SCAND1', 'LOC202181', 'TCIRG1', 'ADRBK2', 'RSPRY1', 'PIK3R5', 'MGAT1', 'C3ORF79', 'TSC2', 'IZUMO4', 'OR2T2', 'SYCE1', 'ZNF772', 'TP63', 'NOC4L', 'GLRA4', 'SFRP4', 'F13B', 'GSTA5', 'NLN', 'IQUB', 'WARS2', 'OR4E2', 'IMP4', 'SNAR-A2', 'STXBP1', 'NUDT4', 'LURAP1', 'MDH2', 'FIBP', 'CCNT1', 'FGFBP2', 'APPBP2', 'NDNL2', 'FASTKD1', 'RAB4B', 'ZNF816', 'PITX3', 'CHRNB1', 'MYLK', 'SESN3', 'PIP5K1B', 'ASH2L', 'PLOD1', 'ARHGEF25', 'PCBD1', 'VTN', 'SEC13', 'TRIM53AP', 'GKN2', 'NPW', 'YEATS4', 'PPM1E', 'SULT1A1', 'DUX4L6', 'OSR2', 'INPP5E', 'CCDC13', 'FAM3C', 'CHRNA10', 'ECEL1', 'TMEM14E', 'TYRP1', 'CRP', 'SUOX', 'CHID1', 'TNC', 'NINL', 'RHBDD2', 'ARL6IP5', 'CATSPERB', 'C16ORF71', 'RBFA', 'MMADHC', 'CCDC102A', 'MMGT1', 'MYT1', 'REC114', 'TTTY17B', 'SLC25A51', 'WDR27', 'DNAJB14', 'GAS2L1P2', 'SNORA53', 'TMIGD1', 'EXOSC8', 'SSR1', 'TMEM126B', 'ILKAP', 'CDHR5', 'ISCA2', 'TLR1', 'RAB24', 'OR6W1P', 'YARS2', 'XRCC2', 'KRT10', 'CARD11', 'PSMA4', 'DNAJC5G', 'C11ORF86', 'MFSD12', 'KDF1', 'TIMM22', 'TMPRSS9', 'TBL2', 'MNX1', 'CDC34', 'NUDCD2', 'OR10K1', 'QSOX2', 'RASSF7', 'AADACP1', 'GPC5', 'NUDT5', 'GMPR', 'CCDC153', 'ASIC5', 'EPB41L4A-AS2', 'ACER2', 'GCG', 'MAGEB3', 'MIR100HG', 'PKIA', 'TMEM92', 'GOT2', 'AFAP1', 'UBASH3B', 'LAMA1', 'PRR15L', 'JMY', 'FAM65A', 'TMEM170A', 'ZNF70', 'RPF2', 'ATP5L', 'DUSP7', 'TMPRSS6', 'OR2T3', 'SLC4A4', 'ST13', 'TPPP3', 'ZNF718', 'C8ORF74', 'B3GALNT1', 'OSTF1', 'ABI1', 'ACOX3', 'CEP44', 'GPD1', 'ZNF517', 'CGRRF1', 'ATP1A1', 'DUSP5P1', 'SNORD67', 'TCF4', 'CT47A9', 'RUNX1', 'FAM171A2', 'HIST1H2AB', 'TMEM79', 'ROCK1', 'GTDC1', 'CD248', 'CENPO', 'NPR1', 'VPS72', 'DYNAP', 'COA7', 'TNFAIP2', 'ZBTB47', 'IKZF1', 'MRAS', 'FANCL', 'MRGPRF', 'TMX1', 'POMK', 'SNORD115-39', 'PRTG', 'OTOR', 'SEPHS1P1', 'KRT73', 'CSDE1', 'UBN1', 'TSPY2', 'EVI2B', 'ERAS', 'PMS2P5', 'SNORD82', 'RFXAP', 'BSN', 'ATXN1L', 'DDIT3', 'MUS81', 'GTF2H1', 'BNIP2', 'BTN1A1', 'COG6', 'LOXL1', 'LINC00696', 'C1ORF204', 'ATP1A1-AS1', 'ATHL1', 'LYRM4', 'ECE1', 'TUBB4B', 'PTTG1IP', 'LIN52', 'NUTM2A-AS1', 'ZWINT', 'AUNIP', 'SPRED1', 'METRNL', 'GPD1L', 'BMS1P20', 'GYS2', 'GSTA2', 'ZSWIM2', 'YBEY', 'SLAMF7', 'GDA', 'TRIAP1', 'TOMM22', 'MYH10', 'CWC25', 'SNORD113-9', 'ANAPC1', 'IL23A', 'MORN5', 'GAGE2D', 'OR4F21', 'TUBA1C', 'FAM133CP', 'CST1', 'ADCY10', 'AZIN2', 'OR6B3', 'RAB5B', 'OPALIN', 'HTR2A', 'DCTN5', 'C1QTNF4', 'HAMP', 'FIGNL1', 'WDR36', 'SLC2A10', 'FRMPD1', 'NHLRC1', 'IQCC', 'ATXN2L', 'SC5D', 'LANCL1', 'CELA2A', 'RPA4', 'LBH', 'CAPRIN1', 'UGT2B10', 'LDB1', 'EPHA7', 'ZMYM5', 'HNF1B', 'ISLR', 'ENTHD2', 'DPP7', 'C1ORF140', 'GTF3C2', 'TP73-AS1', 'FADD', 'ACSM3', 'OR2AE1', 'NT5DC2', 'TNFAIP3', 'DCLK1', 'SLX1B', 'TMEM161A', 'GALNT11', 'PSG7', 'ADAMTS19', 'MAK16', 'KLHDC1', 'FGF12', 'TREML3P', 'ACOT7', 'SPAG11A', 'TDRD3', 'ZNF398', 'KRTAP4-4', 'SP5', 'ZNF286A', 'SLC26A1', 'OR1S2', 'TAAR6', 'LILRA2', 'REM1', 'CDR2L', 'SERTM1', 'C11ORF49', 'TMEM223', 'FER', 'SNORD46', 'TCTA', 'NIPSNAP3A', 'PPIL1', 'HLA-DQB1', 'CD320', 'C14ORF37', 'CDKAL1', 'SHKBP1', 'LBHD1', 'DNM1L', 'LRRC74A', 'FAM110C', 'ALG9', 'SUGP2', 'CFAP52', 'INO80B', 'CHKB', 'SFT2D2', 'TEX2', 'DEFB113', 'ST6GALNAC1', 'BTBD1', 'FRY', 'OR52B6', 'EXOSC5', 'MSTN', 'ULBP2', 'PAF1', 'ANKRD30BL', 'HSP90AB1', 'PSG5', 'C14ORF177', 'MCPH1', 'COX7A2', 'C5ORF24', 'RPN2', 'THSD1', 'ZSCAN4', 'TUBA3E', 'NTRK1', 'KLHL12', 'RNF168', 'LECT2', 'DDX10', 'HTR1A', 'LOC100128573', 'ENPP5', 'TM9SF3', 'TAC4', 'CANX', 'PKIG', 'SRP68', 'CCBL1', 'VIM', 'C8ORF76', 'GBA3', 'TMEM39A', 'TMEM150C', 'INTS4', 'PADI3', 'TIMM17A', 'EEF1E1', 'BMP5', 'ACOT2', 'UBXN1', 'COASY', 'GAGE12F', 'CCT4', 'ACTG2', 'PPP3CB', 'KIAA1045', 'CLDN23', 'DLGAP2', 'LOC644936', 'ASB1', 'SH3BGRL3', 'SNORA70B', 'SLC22A5', 'C21ORF58', 'ZBTB1', 'PXYLP1', 'CDK8', 'MAGEA2', 'USPL1', 'CENPC', 'HIST1H2BF', 'ATP5O', 'RAX', 'CFAP44', 'PWAR5', 'TAF7', 'ANKRD31', 'SEMG2', 'ADAM15', 'LMNTD2', 'HIST1H3C', 'RNF41', 'ARL6IP4', 'HOXA5', 'CLEC16A', 'KIF18A', 'HBD', 'SAP30BP', 'FAM103A1', 'MRPL36', 'FAM8A1', 'ZNF236', 'NUDT7', 'CTXN2', 'PRAMEF10', 'PTK2B', 'CRYM-AS1', 'ATP11A', 'SNORD33', 'SLC25A24', 'STAM2', 'ZRANB2', 'SEBOX', 'HDHD2', 'COL7A1', 'TMED10', 'ZG16B', 'CELF1', 'PRSS38', 'GSAP', 'DDX26B', 'KRT8P41', 'LAP3', 'PTMA', 'BGN', 'APLNR', 'FOXH1', 'CLK1', 'INPP5F', 'NCS1', 'ZNF704', 'SETDB2', 'BHLHE40', 'SUPT4H1', 'C8A', 'SPDYA', 'WDR44', 'PMP22', 'GAS2L1', 'RAB8A', 'MTERF4', 'BTN3A3', 'ACSS3', 'BCRP3', 'PRELP', 'STUB1', 'C1ORF52', 'FAM26D', 'SLC9A7', 'SMAD1', 'CLEC3A', 'PFN1P2', 'KATNBL1', 'C9ORF91', 'GPR82', 'RASL11B', 'NUDT19', 'TMEM86B', 'CHD2', 'CYP2A6', 'WDR49', 'UBAC1', 'PSMB5', 'PAEP', 'MARCH11', 'MDK', 'CLEC1B', 'PRKCH', 'HYKK', 'PRDX5', 'TSC22D3', 'TMEM53', 'ZMYND8', 'INPP5B', 'ZNF512', 'NRSN1', 'ME2', 'PLP1', 'SKOR1', 'C4ORF32', 'TTC39C', 'SCARNA8', 'PCDHGA12', 'WFDC8', 'SF3B5', 'CDK12', 'MCM7', 'STAP2', 'PSMA5', 'ADPGK', 'BEST1', 'NUCB2', 'CUX2', 'POGK', 'GLT8D2', 'PHLDB1', 'LRRN4CL', 'SPAM1', 'SUSD1', 'TCTN2', 'C20ORF203', 'SPAG8', 'PTGFRN', 'NFS1', 'ALOXE3', 'LOC400043', 'GRAMD2', 'SYN1', 'HGC6.3', 'OR4C45', 'ZNF582', 'CHAC1', 'FAM169B', 'SNORD115-16', 'ARFGEF3', 'NAPA', 'THNSL1', 'L3MBTL3', 'PDRG1', 'FANCD2OS', 'ANKRD34A', 'RAET1G', 'PLAG1', 'RARB', 'FAM46C', 'KLF4', 'HSD17B1', 'ADIRF', 'KRTAP19-5', 'PDSS1', 'GLYCTK', 'ZNF771', 'RPL27A', 'NOP14-AS1', 'CHST2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 2.911754014066937e-15 NRMSE: 4.552816846324661e-16 MAPE: 6.7210461019423446e-12 Pearson Correlation: 0.13101480171081462 Spearman Correlation: 0.17623158716222811 Coefficient of Determination: -3.881763621062613 RMSE: 1.0973700456967364 NRMSE: 0.3616670113033868 MAPE: 816.4281410768989 Predictor: ElasticNet Pearson Correlation: 0.4505204276012525 Spearman Correlation: 0.4486188814602818 Coefficient of Determination: 0.082130461746862 RMSE: 0.6001967170695838 NRMSE: 0.09384672301924536 MAPE: 389.20560073325066 Pearson Correlation: 0.20212657726973168 Spearman Correlation: 0.25994537118329925 Coefficient of Determination: 0.030707907726839734 RMSE: 0.48898108831903897 NRMSE: 0.16115651187101673 MAPE: 155.21207026492277 Predictor: RandomForests Pearson Correlation: 0.6082013988213127 Spearman Correlation: 0.5654429620732799 Coefficient of Determination: 0.3065305111649408 RMSE: 0.5216951701283464 NRMSE: 0.08157222580382244 MAPE: 286.27379352818906 Pearson Correlation: 0.35722744716908617 Spearman Correlation: 0.3593524982537908 Coefficient of Determination: 0.12207599297607474 RMSE: 0.46536443585664644 NRMSE: 0.15337302612110157 MAPE: 185.16489302191695 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['CDCA7', 'PTGR2', 'CNNM1', 'GLRA3', 'KRTAP10-11', 'DIRC2', 'GPR17', 'OR4D6', 'FARSB', 'CEACAM6', 'SEPSECS', 'ANKRD36', 'NELL2', 'BAP1', 'COL6A4P1', 'OR6S1', 'HNRNPCL3', 'CELA3A', 'DEFB131', 'TRAPPC9', 'SULT4A1', 'SRBD1', 'GPR158-AS1', 'YY1AP1', 'UGT1A10', 'YPEL2', 'MAP4', 'LOR', 'NAB2', 'RAF1', 'ANKFN1', 'TBC1D3', 'PELO', 'ARHGEF18', 'KRTAP5-4', 'TMLHE', 'GRAMD1A', 'PIN1P1', 'MAD2L1', 'MARK2', 'MCUR1', 'PPBPP2', 'IRF7', 'PHAX', 'SLC8A2', 'ASH1L', 'MARCH1', 'SUV420H1', 'ZNF519', 'EHD1', 'CCDC124', 'BSPH1', 'ITGAV', 'SLC6A17', 'RRM1', 'ZNF134', 'MXRA8', 'NME8', 'HCG18', 'DDX21', 'DAB2', 'SCUBE2', 'CALCOCO2', 'C16ORF71', 'KIR3DL2', 'PPWD1', 'GNAT3', 'SLC25A32', 'FATE1', 'WNT11', 'MANSC1', 'CRHR2', 'NDUFS5', 'BCAS1', 'HSD17B4', 'SAFB2', 'CCDC91', 'PUM1', 'BRINP1', 'IFNLR1', 'CD8A', 'C12ORF76', 'DNHD1', 'KATNBL1', 'ZFYVE27', 'ZNF512', 'IL5RA', 'C3ORF14', 'ALPI', 'WNT5B', 'TAPBPL', 'SULT1A3', 'KIF26B', 'GK2', 'ZSCAN12', 'CYP2F1', 'STX10', 'ARPC1B', 'DGCR5', 'HERC1', 'GNA15', 'S100A1', 'HMGA2', 'GSS', 'ATF7IP2', 'SFXN2', 'SRSF7', 'SKIL', 'ZDHHC2', 'LMF2', 'OACYLP', 'NUPR1', 'MRPS2', 'DNAI2', 'NSMCE4A', 'CTSH', 'ADCY5', 'ABCB6', 'BACE1', 'C2ORF69', 'PEAK1', 'WNT4', 'ASB13', 'FASTKD5', 'ABCC10', 'ZNRF2', 'CISD1', 'SPRYD4', 'PRKAR2A', 'LDLRAP1', 'LAMTOR4', 'ITGA3', 'MIR4697HG', 'LRRC57', 'TMED7', 'NOTUM', 'TMEM102', 'FTHL17', 'PDZK1IP1', 'ADAP2', 'ST7-AS2', 'NXPE2', 'ANP32AP1', 'MTDH', 'HSPB1P1', 'NMUR1', 'ZNF678', 'TVP23C', 'METTL15', 'CREBBP', 'ACTRT1', 'YLPM1', 'IL23R', 'C14ORF28', 'DAPK2', 'BTC', 'FSCN1', 'LPPR5', 'FAM53A', 'CYLD', 'EIF2D', 'MAP1LC3C', 'ERLEC1', 'KIF1BP', 'KIF21B', 'MRPS11', 'DLEC1', 'GSTK1', 'LRRC75A-AS1', 'TACO1', 'RLTPR', 'MAGI2', 'RHEBL1', 'ITGB5', 'C8ORF74', 'ITPRIPL2', 'NOL4', 'MYO1H', 'AFAP1L1', 'UBR5', 'IDI2', 'FBXO4', 'AASDH', 'AADACP1', 'C1ORF146', 'MARCH11', 'LINC00240', 'MFAP4', 'FGD5', 'MMAB', 'GPR62', 'ITPRIP', 'BRS3', 'NELL1', 'PNPLA5', 'ZNF267', 'FAM192A', 'C9ORF171', 'HSPBAP1', 'TSN', 'TBC1D16', 'PCDHA10', 'LETM1', 'DPYS', 'XKR3', 'TTC21A', 'KRT33A', 'PLVAP', 'MYO9A', 'BAGE2', 'SNORD116-8', 'RBBP7', 'NTSR1', 'OR51M1', 'TCHP', 'IFNAR2', 'UBE2Q2P2', 'HIST2H3C', 'RPRD2', 'TBL1X', 'TAS2R3', 'ZNF792', 'HIST1H2AK', 'GNB5', 'SNORD116-11', 'PACSIN2', 'YWHAEP7', 'LINC00523', 'ANP32E', 'LL22NC03-63E9.3', 'SOD2', 'TOR1AIP2', 'LSM5', 'ZNF704', 'ATOH7', 'ZNF45', 'MST1R', 'NNAT', 'RNF34', 'SNORD35B', 'SNORD2', 'VPRBP', 'DDA1', 'PSORS1C2', 'CX3CL1', 'THUMPD3-AS1', 'OCM', 'SUPV3L1', 'IFNA5', 'CLPTM1', 'C3ORF35', 'LINC00654', 'PRDX2', 'ZNF836', 'GSTCD', 'SLC37A1', 'CEP250', 'HTR3E', 'CELA1', 'CCT2', 'DCT', 'FAM157A', 'UGT3A1', 'L2HGDH', 'SLC36A1', 'ACBD6', 'DNAJB5', 'KIAA1324L', 'PDE6G', 'DHODH', 'UPK1B', 'APOBEC4', 'MRPS14', 'CBR3', 'LOC256880', 'TMEM155', 'ATAD5', 'MTX2', 'RBM33', 'CTNNBIP1', 'POLR3F', 'SUSD3', 'PAGE5', 'CEP83-AS1', 'RHBDD3', 'PCSK2', 'ZDHHC12', 'FOXE1', 'PSMA4', 'LCOR', 'ZMYND11', 'CCDC37', 'GNAL', 'ERP29', 'OBFC1', 'NCAPG', 'SNORD114-29', 'TPH2', 'CAPN9', 'MEGF6', 'UNC5CL', 'CLPX', 'CXORF36', 'SLC6A11', 'GCA', 'CYTH2', 'ZNF540', 'SNHG7', 'HOOK2', 'GFER', 'RNF151', 'PGPEP1', 'CATSPERB', 'FAT1', 'CHRNA4', 'FBLL1', 'SRMS', 'POMT2', 'CARD16', 'DSN1', 'POU2F1', 'C12ORF45', 'SLC35D1', 'USP3', 'EIF5AL1', 'GINS1', 'POU6F1', 'ATP6V1G2', 'OSGIN1', 'KLHL34', 'COQ4', 'COBL', 'EEF1E1', 'SERPINB1', 'SOHLH2', 'EIF3D', 'ETFB', 'TM4SF4', 'ATP6V1C1', 'CSF2', 'TIPARP', 'PLAG1', 'SLX1B', 'MBLAC2', 'C11ORF74', 'KLK14', 'CYP2D7', 'GRHL1', 'SLC13A3', 'EPX', 'S100A7L2', 'MAGT1', 'ARHGAP21', 'RECQL', 'BNIP3', 'ZNF223', 'SNX12', 'FKRP', 'TCEANC', 'ZC4H2', 'ALG1L2', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.8542916931010961 Spearman Correlation: 0.8263215138277644 Coefficient of Determination: 0.7298142968080403 RMSE: 0.10271711118553102 NRMSE: 0.06644658066418112 MAPE: 338.67233601722864 Pearson Correlation: 0.05143381487649849 Spearman Correlation: 0.2566411284768375 Coefficient of Determination: -590.8623492625989 RMSE: 4.494265848103521 NRMSE: 4.497864139415054 MAPE: 955.555688292442 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: RandomForests Pearson Correlation: 0.5787194974059392 Spearman Correlation: 0.5226294220952626 Coefficient of Determination: 0.18704837445432276 RMSE: 0.17817385080642434 NRMSE: 0.11525872382131909 MAPE: 166.22483727485144 Pearson Correlation: 0.27561101950389905 Spearman Correlation: 0.29955406735227047 Coefficient of Determination: 0.06281926516290437 RMSE: 0.17883811265488095 NRMSE: 0.1789812976930354 MAPE: 131.70353004626415 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['MMP12', 'ZHX3', 'CHP2', 'IRS1', 'FAM195A', 'UBXN2A', 'IL7R', 'ACOX2', 'PLAU', 'LRRC36', 'RBM22', 'IPO5', 'AGO2', 'KRT13', 'POLR3A', 'SGCD', 'MRPL17', 'SENP3', 'ZNF676', 'PRPS1L1', 'WDR49', 'SMC2', 'IQUB', 'CD1D', 'RPP38', 'SNORD115-4', 'SLC4A3', 'ECE2', 'APOA2', 'DDA1', 'CARD17', 'TMEM132C', 'PAGE5', 'TMEM201', 'MROH8', 'ZNF337', 'DST', 'TXNDC5', 'FGF2', 'FBXO48', 'WDR93', 'CAPZB', 'C11ORF95', 'ZNF503-AS2', 'CD40LG', 'MCM5', 'ASH2L', 'AFAP1-AS1', 'PEX11B', 'SCN3B', 'SH3BP1', 'LY86', 'RNF115', 'ZDHHC5', 'ARHGEF25', 'SYT16', 'STYXL1', 'OLFML3', 'KLHDC7A', 'NKX1-2', 'CHST7', 'NDUFS5', 'GTF2F1', 'HSFX2', 'ZFHX4', 'RAMP3', 'UBE2Z', 'USP32', 'RBCK1', 'PPP1R14C', 'PRAMEF4', 'LOC341056', 'KRTAP5-5', 'WSCD1', 'KRTAP6-3', 'NUP50', 'C2ORF78', 'CCDC74B', 'FAM215A', 'EBF1', 'CASC3', 'COL26A1', 'OR10W1', 'FAM41C', 'THNSL1', 'NUP107', 'REC114', 'GXYLT1', 'PRICKLE2', 'PIP4K2B', 'VSTM2B', 'DLEU2L', 'ASAH1', 'CEBPG', 'UQCRC1', 'TAF15', 'TMEM80', 'NPM1', 'ADTRP', 'BOLA3', 'CSMD1', 'TUBA4A', 'UPF2', 'KRTAP21-1', 'FMNL2', 'SNX21', 'TMEM87B', 'NANOS3', 'ASB6', 'HMGCS1', 'SAC3D1', 'C7ORF25', 'UIMC1', 'MFSD9', 'SPAG17', 'PPAP2B', 'PFKFB3', 'SNORD32B', 'SNORD111', 'FMO3', 'EDEM3', 'LRSAM1', 'PASD1', 'ACTRT2', 'IAH1', 'PRR18', 'ADAMTS16', 'CXCL11', 'ZNF620', 'GATA4', 'RIN1', 'OR51F2', 'CENPV', 'IPO7', 'NDUFB10', 'EFHD2', 'ZNF205', 'PATL1', 'EN1', 'PRR26', 'ZFHX3', 'FAM69C', 'KRTAP21-2', 'AGL', 'C19ORF48', 'ELMSAN1', 'PPP2R4', 'TNR', 'C8ORF48', 'HMP19', 'FAM9B', 'KRTAP10-7', 'DDX12P', 'CHST4', 'FAM162B', 'C1QTNF1', 'RNF135', 'GOLGA7', 'ZNF33A', 'GLMN', 'OR3A1', 'ODF2', 'FCGR1C', 'TMEM71', 'CPSF7', 'SCGB1C1', 'CA9', 'ITGA11', 'MLEC', 'BRD2', 'CREG1', 'ESAM', 'KCNMB2', 'S100G', 'CDCA8', 'MOB1A', 'SAMD12', 'LOC344967', 'VPS28', 'SPINT1', 'IFNA2', 'LRRTM3', 'MSRB1', 'OAZ3', 'SLC17A2', 'NANOS1', 'PRAMEF14', 'OTUD7A', 'TMEM44', 'ASCC1', 'RFX2', 'BRDTP1', 'STK33', 'KIAA0408', 'SPANXN1', 'SNHG9', 'RPL31P11', 'CWC27', 'AGO1', 'EFCAB12', 'RRAGC', 'PSG2', 'NKX2-4', 'ASAH2B', 'SRA1', 'CCDC53', 'GTPBP10', 'ATP5H', 'SNORD114-10', 'APH1B', 'CD48', 'TUFM', 'SNORD59B', 'SP100', 'SLC39A2', 'CD27-AS1', 'SLC37A3', 'CEACAM21', 'TMEM99', 'CEBPB', 'PCDHB17P', 'AQP7P1', 'DSEL', 'C14ORF1', 'RPS2P32', 'MROH6', 'GAPDHS', 'MYH9', 'GMPR', 'SIDT1', 'PLEKHF1', 'ZGLP1', 'FAM213A', 'ST6GAL1', 'NFKB2', 'ITPRIPL2', 'SNORD115-5', 'OR52E8', 'HNRNPUL2', 'PCNT', 'DEFB135', 'FAM71E1', 'TAF1', 'GMCL1', 'ASL', 'SERP1', 'TIGD2', 'MAGEC1', 'DEFB132', 'DCUN1D2', 'ARAF', 'OPN1SW', 'RANBP3', 'PDE1C', 'CCDC144B', 'PDS5A', 'PAM', 'PALLD', 'SRF', 'FANCM', 'CILP', 'CCDC59', 'EDRF1', 'CSN1S1', 'SLC1A3', 'WNT1', 'GJA5', 'HERC5', 'FCHO1', 'MTMR7', 'GOLGA8B', 'NXPE1', 'AMELX', 'CHIC1', 'LRRC4C', 'BHLHA15', 'LINC00634', 'DCAF13', 'HSPA13', 'PRRC2B', 'UBTD2', 'SYNGR1', 'VPS53', 'DPH2', 'KIAA1324L', 'PQLC3', 'SNORA53', 'FXYD5', 'TMEM175', 'TCTN2', 'RILP', 'SNX13', 'FAM206A', 'SRFBP1', 'WFIKKN1', 'SLC6A12', 'GNRH2', 'PLG', 'KRT35', 'RPS4Y1', 'TENM3', 'PGC', 'SNORA26', 'SERPINB12', 'MUC1', 'CCDC25', 'CALHM1', 'AASDH', 'DNAH6', 'ZP4', 'VGLL2', 'FGL2', 'SH3GL1', 'GLRX', 'ZNF221', 'SNORD115-37', 'NKD2', 'TULP4', 'OR4Q3', 'CRYGC', 'MME', 'PMS2P4', 'C9ORF85', 'OR2S2', 'TTTY13', 'CACNB2', 'SBF1', 'QTRT1', 'CD109', 'GABPA', 'CFHR3', 'SNORD90', 'QRICH1', 'TMEM180', 'SLC43A2', 'WHAMMP3', 'GATS', 'FAM134C', 'IL27RA', 'OR51V1', 'UBE3C', 'DARS', 'SCG2', 'ZNF20', 'RADIL', 'TMEM139', 'CDC20', 'PPIEL', 'SPIDR', 'DUSP3', 'RASSF1', 'TMEM260', 'COL9A3', 'SUMF1', 'REN', 'MOB3B', 'TBK1', 'MORN2', 'ARFIP2', 'OR51L1', 'CLDN17', 'ZC3H10', 'TCF15', 'USP39', 'SLC2A10', 'HSPA9', 'NMS', 'CADM2', 'CDR2', 'TMEM206', 'BCAS2', 'MYO3B', 'OR1B1', 'HIST1H1B', 'STAM2', 'ZNF320', 'WDYHV1', 'MEIOB', 'TMEM160', 'TANGO6', 'SERGEF', 'EPB41L4A-AS2', 'SLC45A4', 'ENTPD8', 'PP14571', 'CRLS1', 'EPS15', 'PABPC1L2A', 'SFRP2', 'TLR1', 'MIR1-1HG', 'TRAPPC8', 'MFI2', 'LMNA', 'PBX2', 'NXPE2', 'SUCNR1', 'PMS2P1', 'SPATA13', 'SETD6', 'FCGR3A', 'KCNN3', 'USP12', 'KRT36', 'OR2J2', 'RNF207', 'HIST1H3A', 'SEC61B', 'KLRAP1', 'MAPK11', 'LRRC24', 'RPGRIP1L', 'COL4A4', 'FRZB', 'INTU', 'TNNC2', 'LSM3', 'SMPD3', 'PDE7A', 'CRTAP', 'UTP3', 'NBPF7', 'SPECC1L', 'PROSER3', 'CASC10', 'DYX1C1', 'WIBG', 'ARL14', 'EIF2B2', 'ATXN7L2', 'PRDX5', 'MRM1', 'HSPA5', 'PDLIM2', 'SRR', 'RNF24', 'CIZ1', 'TRIML1', 'SCARNA8', 'DPF1', 'SF1', 'HERC1', 'MYEF2', 'GNL3L', 'SLC4A10', 'SNORD117', 'CSTB', 'JUND', 'FAM71D', 'C8ORF74', 'PM20D1', 'CCER1', 'RCN1', 'SIGLEC7', 'HAVCR1', 'PUS10', 'ERAP1', 'PCGF6', 'NKAIN1', 'HGD', 'PCBD2', 'KYNU', 'PPP1R18', 'MYF6', 'MBOAT7', 'PID1', 'NUTM1', 'PRMT2', 'ZNF137P', 'DNAJC1', 'BBS12', 'MYO15B', 'FLI1', 'ATP5E', 'CCDC90B', 'MAPK8IP2', 'SNORA79', 'GFM2', 'LINC00893', 'FAU', 'RHOU', 'CPLX3', 'PSMB4', 'SCG3', 'YIPF1', 'CLK2P1', 'COX20', 'GLI2', 'MS4A4A', 'HAS1', 'SCG5', 'ZMYM2', 'VDAC2', 'ZNF222', 'IL17RB', 'NUCB2', 'GOLGA8EP', 'INO80E', 'GRAMD1A', 'EPB41L4A-AS1', 'SULT6B1', 'SGK3', 'FTLP10', 'DHX33', 'SNORD113-7', 'TTC30B', 'CUX2', 'SYCE1L', 'RGS8', 'MAGEF1', 'ZUFSP', 'RPL39', 'KDSR', 'SLC4A5', 'PRKCG', 'C2ORF83', 'FGFR4', 'HES6', 'PIGZ', 'NASP', 'TRIM49', 'CCDC63', 'IFIH1', 'EIF5', 'TMEM254', 'PLA2G2E', 'LINC00598', 'SLC22A16', 'EPM2AIP1', 'SPARC', 'SNORD115-26', 'LAMB2P1', 'HAVCR2', 'CYSTM1', 'PHB2', 'RHBDD3', 'TTF2', 'MAP3K11', 'ZEB2', 'OR9G4', 'SLC36A2', 'IGFN1', 'DNPH1', 'LRIG1', 'THAP11', 'AEN', 'HIF1A', 'TRA2A', 'MYO1G', 'ZIC4', 'EXOSC8', 'ZSCAN20', 'ATG4B', 'OR52I1', 'RAB9B', 'CEP164', 'C12ORF71', 'ACTR1B', 'SLC20A1', 'NUGGC', 'MUC20', 'SNORD119', 'SNORD116-25', 'HTR1D', 'ELOVL2', 'SORBS1', 'RUSC2', 'TMEM116', 'LILRA4', 'RHOJ', 'TARM1', 'RASD2', 'BOD1', 'TOMM40L', 'CXCR2', 'HELQ', 'CXORF36', 'WEE1', 'SNORA4', 'TMEM25', 'PSMD1', 'DNMBP', 'PCDH7', 'SUSD1', 'TYR', 'B3GALNT2', 'HEPHL1', 'GCNT2', 'LOXL4', 'SH3BP5', 'TTTY20', 'FARP2', 'UBL4B', 'HECW2', 'MPPE1', 'HHATL', 'FES', 'LMAN1', 'TOM1L2', 'GAPT', 'STAG3L3', 'BNIPL', 'GDI1', 'NWD1', 'INHBE', 'DRG2', 'WDR63', 'MIA3', 'MON1B', 'CDH23', 'CD1C', 'KCNAB1', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 3.7481403074294756e-15 NRMSE: 8.473245862844976e-16 MAPE: 3.3041068458849246e-12 Pearson Correlation: 0.17176474524365715 Spearman Correlation: 0.11744220076090141 Coefficient of Determination: -6.418875409498985 RMSE: 2.034281691239585 NRMSE: 0.5493604351173603 MAPE: 1887.3038527924405 Predictor: ElasticNet Pearson Correlation: 0.46400254270631414 Spearman Correlation: 0.33878220200131853 Coefficient of Determination: 0.10535347184167054 RMSE: 0.6079165945356452 NRMSE: 0.1374288673077077 MAPE: 172.25389889572102 Pearson Correlation: 0.5652514812005297 Spearman Correlation: 0.3659642961662277 Coefficient of Determination: 0.11846307869576556 RMSE: 0.7012329338454203 NRMSE: 0.18936887222398605 MAPE: 357.1067124421177 Predictor: RandomForests Pearson Correlation: 0.6530142098109878 Spearman Correlation: 0.6017475293315654 Coefficient of Determination: 0.4178939444213339 RMSE: 0.490364833043595 NRMSE: 0.11085448921523566 MAPE: 172.23623502802934 Pearson Correlation: 0.6917907953174051 Spearman Correlation: 0.5742914002868316 Coefficient of Determination: 0.43670103907466684 RMSE: 0.5605463469193755 NRMSE: 0.15137627516051191 MAPE: 375.5333477763829 Protein: TP53 x_train_column_count: 1002 x_train columns: ['MARVELD2', 'OR56B1', 'OR2A7', 'OR1L1', 'MMEL1', 'ABCD3', 'SNX2', 'GRXCR1', 'GABRA6', 'TDRP', 'TRAF2', 'MOV10', 'LOC654342', 'ACAP1', 'IARS', 'AFP', 'FBLIM1', 'LCE2A', 'PRKG1', 'PAIP2B', 'C8B', 'SGK494', 'MRPL19', 'TMTC1', 'MC4R', 'RQCD1', 'PREX2', 'FGF12', 'FRMD6', 'EIF2S2', 'LINC01139', 'DNM2', 'IL13', 'RUVBL1', 'WDR74', 'GLE1', 'HMOX2', 'ANP32E', 'CYLC2', 'RNY4', 'DDX41', 'LRTM2', 'CSAG3', 'STRN3', 'C1ORF146', 'TMEM182', 'SLC40A1', 'TGDS', 'AURKB', 'KLHDC8A', 'TARBP2', 'MLLT4-AS1', 'SLU7', 'SYNGAP1', 'KISS1', 'ITGB2', 'C21ORF2', 'ATP9A', 'CYP26C1', 'TYK2', 'ZNF286B', 'ITFG3', 'TBX3', 'TMEM217', 'CGB', 'CNNM3', 'PTPRT', 'ARGFXP2', 'AGAP7P', 'RPL39', 'SLC27A3', 'LAMP1', 'EFCAB13', 'MXRA7', 'SAP30L', 'C7ORF31', 'SPANXC', 'C20ORF85', 'PDGFRL', 'OR2J3', 'FITM1', 'MBD3L1', 'KLHL22', 'JAK2', 'LRP5L', 'DUSP9', 'PAH', 'NPR3', 'SFMBT1', 'POU4F3', 'THSD7A', 'IL13RA1', 'TRAPPC9', 'LAMA3', 'MAPK12', 'FAM183CP', 'AKAP9', 'SPATA31A5', 'OR4F29', 'TCEB1', 'CDK11A', 'NLRP7', 'RETSAT', 'CCDC120', 'CCDC157', 'LINC00930', 'NKX2-2', 'TBC1D31', 'DOC2B', 'UTP11L', 'C17ORF74', 'ZACN', 'GTF3C3', 'WWP2', 'COMMD3', 'IRF2BP2', 'TATDN2', 'IQSEC3', 'NFKBIB', 'MCTS1', 'CREBBP', 'MASTL', 'NCF1', 'NOC3L', 'GPR108', 'TBC1D3B', 'ZNF580', 'LOC154449', 'IFT88', 'ZNF295-AS1', 'ARFGEF3', 'HELZ', 'C3ORF58', 'DEGS1', 'UBE2Q2', 'GNAO1', 'LINC01101', 'SNORA1', 'ARFGAP1', 'COMMD7', 'PIP4K2B', 'TSSC4', 'SF3A2', 'UXT', 'NXN', 'HEXB', 'GPR158-AS1', 'SART1', 'ZNF837', 'TRPV2', 'TADA3', 'KANK4', 'SEC24B', 'ANAPC16', 'LGI1', 'B4GALNT1', 'FAM58A', 'LPCAT2', 'CRACR2A', 'LOC642929', 'UQCRFS1', 'RIC3', 'PUS3', 'MPP2', 'BUB1B', 'C8ORF59', 'DEFB107A', 'SMTNL1', 'KCNAB2', 'NT5DC3', 'PPWD1', 'CHRNA4', 'MRPS22', 'ERICH6', 'KIF9', 'YBX1', 'SPATA3', 'HSD11B2', 'CD6', 'DRC1', 'CBX3', 'DUSP26', 'MRGPRX2', 'TMEM252', 'ATXN2', 'TEX9', 'HSPA1B', 'CRYBB1', 'VPRBP', 'WNT9A', 'MRPL3', 'ATP7B', 'GYPA', 'ARAP1', 'KRT84', 'MMP23A', 'CSNK1E', 'SNORD1C', 'MED8', 'TOP1P2', 'TRERF1', 'RCE1', 'RPL23AP64', 'TRMT10B', 'ZNF117', 'C10ORF99', 'VAV3', 'DKKL1', 'POLB', 'TMED10P1', 'SLC36A1', 'TRIQK', 'ROPN1L', 'RLN2', 'CASP9', 'DNAJB9', 'ADAM18', 'SHISA4', 'CFL1', 'PDE8B', 'GPR180', 'UBR1', 'THRA', 'IL12B', 'ZNF607', 'CLP1', 'IL1F10', 'CPN1', 'NANOS2', 'BTBD6', 'CUL2', 'SESN2', 'GJA5', 'RPP25', 'LAMB1', 'UGT2B4', 'SNORA61', 'MRPL42P5', 'KSR1', 'CLDN25', 'PRSS38', 'MMP2', 'RBM24', 'ITFG1', 'CYP1B1', 'MS4A7', 'CHURC1', 'PVRIG', 'RUNX1T1', 'KRTCAP2', 'SIKE1', 'HSPA2', 'TF', 'C16ORF62', 'PLAGL1', 'SARS', 'PPP1R35', 'MDS2', 'CCDC62', 'FAM156A', 'CCS', 'SLC5A11', 'RIN1', 'CYTH4', 'SNORD123', 'C7ORF61', 'CEL', 'LINC00115', 'KRTAP10-8', 'TOX', 'DENND2D', 'SLC4A1AP', 'ITPK1-AS1', 'C14ORF132', 'KCNMB4', 'UNK', 'SH3GL1', 'PHACTR3', 'HSD3B1', 'ANGEL1', 'SP5', 'PRR26', 'DCHS2', 'DSC2', 'ANKFN1', 'MC5R', 'ZNF133', 'EIF6', 'DCAF4', 'HIATL2', 'LSP1', 'COL23A1', 'MOAP1', 'P4HTM', 'ARHGAP10', 'CHAT', 'NAA11', 'FKBP8', 'PRSS50', 'P2RY4', 'ARL3', 'MAGEA6', 'EXOC3L1', 'OVGP1', 'TMEM47', 'TROVE2', 'HS6ST3', 'WDR20', 'CASQ1', 'PIGV', 'WFDC1', 'PNKD', 'SASH1', 'C20ORF27', 'FAM228B', 'LINC00469', 'MED25', 'DIDO1', 'MAPK6', 'CST11', 'HEBP1', 'MAD2L2', 'GLTSCR1L', 'GIF', 'ASH1L-AS1', 'DPRXP4', 'NUP188', 'PDXK', 'DDX3X', 'LINC01184', 'TTF2', 'SLC15A4', 'CXCL6', 'CROCCP3', 'RBM15', 'APCDD1', 'NOL4L', 'IGFN1', 'HNRNPA1L2', 'RASSF9', 'RNF7', 'CALCOCO2', 'OR12D3', 'MRPL57', 'SLC25A44', 'FOXL1', 'CD1B', 'MAN1B1-AS1', 'HIST1H2BJ', 'SURF2', 'NUP37', 'C17ORF67', 'IDUA', 'PRSS57', 'ZNF526', 'A4GALT', 'SPAG4', 'NHLRC4', 'FN1', 'PMS2P4', 'SLC33A1', 'SEC11C', 'NBPF1', 'PPIG', 'TRNP1', 'MYO18B', 'PNCK', 'S100A12', 'NOS2', 'DHRS7', 'VPS13D', 'PELI2', 'SPP1', 'IL17RE', 'ANKRD20A20P', 'NPB', 'DSG1', 'PEX2', 'LPAR4', 'SPEN', 'ROR1', 'NBPF3', 'CCDC83', 'ZNHIT1', 'CCDC12', 'LINC01420', 'GTF2B', 'RFC1', 'FLJ37201', 'DNAH10', 'GATS', 'C2ORF15', 'TRHDE', 'C5ORF49', 'CLDN23', 'SCUBE3', 'SHKBP1', 'NOC2L', 'DUSP10', 'RBP2', 'IVL', 'KLHL42', 'PRUNE', 'ZDHHC5', 'TDRD7', 'PLEKHD1', 'YOD1', 'PAFAH1B2', 'C9ORF170', 'FAM127C', 'TIE1', 'PRKAR1B', 'DALRD3', 'CYB5D2', 'NRG2', 'PRKD3', 'HERC2P2', 'NALCN', 'MRGBP', 'BTC', 'CHML', 'FLT1', 'CEACAM21', 'ZNF556', 'STRN', 'TTL', 'SLC51B', 'GPR88', 'HGFAC', 'DNAJB3', 'BEND2', 'ALCAM', 'KIF20A', 'CD4', 'PPFIBP2', 'LCN8', 'BLCAP', 'PQLC3', 'CLSTN2', 'ADAM11', 'COL24A1', 'RPL37', 'OR52E6', 'C2CD4A', 'PRKCD', 'CCDC112', 'OR51B4', 'CBX6', 'HAND2-AS1', 'PARD3B', 'ZNF497', 'PDIA3P1', 'TNFRSF10C', 'HINT2', 'SNORD6', 'PKD1L1', 'C5ORF38', 'ZWINT', 'MRAP', 'BMP1', 'PTH2', 'ACTR3C', 'C14ORF177', 'KCNC2', 'PP12613', 'NIT1', 'EPB41L5', 'YBX2', 'SNORD26', 'CLK4', 'ZFAT-AS1', 'SLC36A4', 'POU6F2', 'FAAH2', 'GPR161', 'GRAMD3', 'HIST1H2AM', 'ITPKC', 'RIMS1', 'CEP63', 'DKFZP779M0652', 'DNAJC30', 'CHST2', 'NDUFA3', 'HNRNPU', 'FUT10', 'RHOG', 'TWF2', 'ZFPM2', 'KIAA1586', 'CENPBD1', 'FXYD7', 'CACTIN', 'CD3EAP', 'MPO', 'NECAB1', 'DCT', 'GABARAPL3', 'PRDM14', 'STMN1', 'OR52W1', 'FMNL2', 'LYSMD3', 'TCOF1', 'PARVG', 'CX3CR1', 'LRRK1', 'PPP6C', 'ILDR1', 'LOC100132111', 'ZNF34', 'CCDC51', 'FAM174A', 'ZCCHC16', 'CDRT15', 'FAM19A1', 'LSM8', 'ZNF106', 'FBXO33', 'SULF1', 'IL22', 'ZNF655', 'TMSB4XP8', 'LOC728024', 'BOP1', 'SMARCD2', 'RAB6C', 'GFPT1', 'HDGFL1', 'ADPRHL1', 'POMC', 'JDP2', 'FNIP1', 'SRP14', 'OR2T11', 'CANX', 'CGB7', 'INSM2', 'TNNI1', 'TISP43', 'NOA1', 'FCGR3A', 'HAPLN2', 'VWA2', 'PRB4', 'FAM109B', 'RPL26', 'ATP6V1A', 'ACTR3BP2', 'RAB40AL', 'ATP1B1', 'ANKEF1', 'NANOG', 'PDLIM2', 'ATP5C1', 'TAB2', 'MYO1G', 'KALRN', 'NOG', 'CD276', 'SNORD81', 'ALX4', 'KIF21A', 'TJP3', 'ATP2B4', 'UNC45B', 'DNMBP', 'HMGXB3', 'SYNPO', 'OR52A5', 'IGF2R', 'LINC00452', 'SELL', 'CTDP1', 'RAC1', 'NAA15', 'MED1', 'CCDC82', 'TBL1XR1', 'TMEM229B', 'HMGB3P1', 'MYCNOS', 'WDR36', 'NAV1', 'TBRG4', 'SPATA18', 'PRPF19', 'OCEL1', 'ESM1', 'PRH2', 'LOC729609', 'PBOV1', 'ANXA11', 'MAFG-AS1', 'SNORD24', 'C17ORF47', 'CSF3R', 'KDM3A', 'FREM1', 'RPRD1B', 'RGS10', 'SMURF1', 'RANBP3L', 'OSGEPL1', 'MSGN1', 'LIMK1', 'CYP39A1', 'CCDC124', 'TNK2', 'CACNB2', 'HIST1H3G', 'ADRA1D', 'SSX4', 'SLC4A4', 'BCL2L10', 'TMEM41A', 'ZEB1', 'MDM4', 'MSN', 'ADGRG1', 'ART3', 'MORN1', 'GOLGA8B', 'FAM184B', 'IQCF5', 'SERPINA11', 'OR3A3', 'MRPS23', 'SCARNA1', 'TIMP4', 'AP3D1', 'FZD7', 'CACNG5', 'HLA-DRB1', 'BOK', 'GGT5', 'AOC2', 'CAPN9', 'EIF2S3', 'NABP2', 'SYNE2', 'SPRTN', 'IFNA8', 'SLC35A5', 'OR2T33', 'ELOVL2', 'GYG1', 'FLJ13224', 'PSTPIP1', 'GOLGA2P5', 'FBXL8', 'DSE', 'IRF2', 'ZFP69', 'FSTL1', 'SNAR-G2', 'CSTL1', 'ZNF224', 'SCAF1', 'RNF157', 'CNNM2', 'ESPN', 'ZNF584', 'LOC644669', 'OLMALINC', 'DOCK6', 'CNBD2', 'GUF1', 'KRT33B', 'ALDOB', 'OR2M4', 'PRG3', 'OR5K2', 'NDUFAF4', 'MRPL33', 'PEX7', 'NIPSNAP3B', 'FZD9', 'P2RX1', 'APMAP', 'PEX11B', 'C17ORF89', 'ALPL', 'FOXJ2', 'AFAP1L2', 'CNOT3', 'TEX28', 'APPL2', 'NXT1', 'VTRNA1-3', 'CXADR', 'ADGRB2', 'DHRS2', 'DNER', 'TMEM257', 'KCNG4', 'POU3F3', 'TSPYL5', 'SIGLEC9', 'SNORA8', 'KIAA1328', 'LINC01134', 'DACT3', 'SON', 'ZMAT1', 'TRAM2', 'ZNF418', 'PHLDA2', 'DTX1', 'SKA3', 'MSRB1', 'UNC119', 'TAF7', 'LCLAT1', 'NFKBIZ', 'SLC22A4', 'NUP210L', 'ZNF195', 'LCORL', 'LRRC75B', 'RBP7', 'CYP46A1', 'C19ORF45', 'SCARB1', 'SFMBT2', 'MTR', 'CD44', 'ZNF484', 'HLF', 'DCBLD1', 'CDCA7L', 'CD68', 'PON3', 'NDNF', 'TRIM29', 'USP29', 'TNFAIP2', 'C14ORF105', 'SEPT7P2', 'KIF1A', 'LINC00113', 'TDH', 'PLA2G16', 'PSORS1C1', 'CROT', 'SPATA6', 'IFT122', 'LINC00883', 'JSRP1', 'GDF5', 'SHISA9', 'SYCP3', 'IDE', 'DEFB109P1B', 'HES7', 'SMIM10L2A', 'ANKRD46', 'MEX3A', 'SDC1', 'WIPF2', 'MAGEA4', 'TBX20', 'SPINK14', 'ECSIT', 'EHD1', 'TRIP6', 'LINC00202-1', 'LPAR6', 'IRGQ', 'AKAP8', 'KIF4A', 'ABHD8', 'MIEF2', 'CLDN3', 'GNG12', 'ZNF337', 'PCDH7', 'NUCB2', 'LINC00893', 'SCN10A', 'CTSC', 'NAA25', 'SEMA4C', 'GSTM2P1', 'RBP1', 'KCTD12', 'PDCD6IP', 'PSMG3-AS1', 'HEATR3', 'PRICKLE1', 'STYXL1', 'ATP5A1', 'RPS3A', 'HDAC2', 'ATP6V1G2', 'ATP1B4', 'ZNF146', 'SNAI1', 'TBX2', 'DTD2', 'INO80', 'KHDC3L', 'NLRC4', 'ARPP19', 'DHFRL1', 'NYAP1', 'UXS1', 'LRRC31', 'XKR3', 'SAXO2', 'SNORD88B', 'CRYBA1', 'ZBTB42', 'LYAR', 'CYSTM1', 'KRTCAP3', 'CYHR1', 'LINC00482', 'TATDN1', 'FUT1', 'TVP23B', 'RGS12', 'R3HDM4', 'CGNL1', 'RMST', 'RPLP0', 'RFNG', 'DOCK8', 'ITPR2', 'DUOX1', 'LINC00905', 'TRPV5', 'TEKT5', 'ENO3', 'SERPINC1', 'HCFC1R1', 'SIGLEC10', 'PHF1', 'PCM1', 'CCDC66', 'CDK3', 'PP7080', 'ZNF749', 'TNS3', 'LRRN3', 'TBC1D13', 'MED12L', 'XAGE3', 'IGF2-AS', 'GYS1', 'HYKK', 'RPP25L', 'RPIA', 'METTL13', 'MED13', 'PLSCR1', 'RCAN1', 'TNFRSF12A', 'GPR32', 'SLC35G1', 'FAM188B', 'TSPAN18', 'CRYAB', 'MCAT', 'PTPRA', 'FAM20B', 'MSRB3', 'LRP4', 'FOXN3', 'TYMP', 'PLA2G10', 'ZNF330', 'TNFRSF6B', 'ZNF223', 'CSHL1', 'SHC1', 'SMOC2', 'RALA', 'RBL2', 'ST7-OT4', 'PROX1', 'MUCL1', 'FAM134B', 'SLC35G6', 'LARP1B', 'ATP2B1', 'ARNTL', 'CXCR1', 'ZNF321P', 'HK3', 'F7', 'UBE2NL', 'ZNF230', 'NHLH1', 'SOX3', 'OGFOD2', 'ATG7', 'SLC45A2', 'KRT18P55', 'KRT35', 'H2BFM', 'BMP3', 'GYPC', 'PTPN6', 'CDK20', 'AFF3', 'LINC00471', 'GJD4', 'SNORD116-3', 'INHBA', 'CNFN', 'SPATA31D5P', 'SLC7A9', 'ARID4A', 'FSHB', 'ARSD', 'BGN', 'AP1G2', 'CBWD6', 'PDLIM1', 'ZNF473', 'PYGL', 'TMEM41B', 'DKK3', 'ZNF213', 'ZNF69', 'BNIP2', 'KDM8', 'PGM5', 'ACIN1', 'CSNK1G3', 'PTBP2', 'TRIM24', 'FABP5', 'PDCL3', 'ATIC', 'RPL23AP53', 'CYBRD1', 'RPS11', 'PSMA3', 'P2RY10', 'EML6', 'ZSWIM5', 'METTL6', 'PROCA1', 'WDFY1', 'DFNB31', 'FCHSD2', 'C12ORF50', 'RPSA', 'SNORA75', 'C17ORF98', 'WDR41', 'RORC', 'ATP8B1', 'HSPBP1', 'STRIP1', 'ZNF566', 'OR4N3P', 'TMTC3', 'FAM76A', 'OGDH', 'ZNF92', 'COG1', 'CYP2R1', 'SAMHD1', 'RPLP1', 'LRRTM1', 'TTC37', 'PIGN', 'OR8B12', 'WIPI1', 'CNKSR1', 'SRXN1', 'LIN7B', 'ACOT12', 'MCUR1', 'MAGEB16', 'KIAA1551', 'IL1B', 'CELSR2', 'ZNF470', 'CPPED1', 'HDC', 'DNAJC24', 'TMEM178A', 'SEC16A', 'MSL3P1', 'APBB1', 'F2R', 'LOC441601', 'MRPL34', 'NUTM2F', 'MOSPD2', 'ZNF512B', 'TNFSF11', 'RPS6KA6', 'NMUR1', 'GLO1', 'GMNN', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.5969782233642264e-15 NRMSE: 3.8379673716996554e-16 MAPE: 3.135266852295039e-12 Pearson Correlation: 0.24985809096718256 Spearman Correlation: 0.3259779533704029 Coefficient of Determination: -1.2849193872437636 RMSE: 0.6358336661553998 NRMSE: 0.22864312494350744 MAPE: 1412.5309867557964 Predictor: ElasticNet Pearson Correlation: 0.42988938866705095 Spearman Correlation: 0.42491706021738096 Coefficient of Determination: 0.14217759622430293 RMSE: 0.4193956102347873 NRMSE: 0.10079202360845646 MAPE: 545.2079020976295 Pearson Correlation: 0.5165485870968765 Spearman Correlation: 0.5025460930640914 Coefficient of Determination: 0.1945093395971984 RMSE: 0.3775185815082827 NRMSE: 0.1357541017326343 MAPE: 581.5134729759353 Predictor: RandomForests Pearson Correlation: 0.6492666040561388 Spearman Correlation: 0.5387082764904185 Coefficient of Determination: 0.36521509657417606 RMSE: 0.360776701044253 NRMSE: 0.08670432613416319 MAPE: 647.2647689663653 Pearson Correlation: 0.510706204226661 Spearman Correlation: 0.5277832989264715 Coefficient of Determination: 0.2554782116461981 RMSE: 0.3629499858908628 NRMSE: 0.130515295728312 MAPE: 347.89688417547234 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['RCCD1', 'LOC100129534', 'SEMA6A', 'PLA2G4E', 'SLC12A8', 'HEATR3', 'EAF2', 'PPBPP1', 'DEFB115', 'HHAT', 'ESAM', 'TNFRSF6B', 'TMEM106B', 'TNNT3', 'DNAJB6', 'TCN2', 'AGRN', 'MITF', 'PUSL1', 'RFX5', 'USP46', 'TRAPPC1', 'HTR1B', 'SNORD116-23', 'EDARADD', 'ZHX1', 'MICAL3', 'DNAJC17', 'CEACAM8', 'ATRN', 'KCNE5', 'KLHL18', 'MRPL45', 'GAL', 'TCP1', 'ZKSCAN8', 'FOXP1', 'CTBP1-AS2', 'OR10H5', 'MSMO1', 'CD53', 'PAN3', 'KLK1', 'FLT3LG', 'TEX36', 'AOC3', 'SSX5', 'ASTL', 'TRHDE', 'TAS2R40', 'CFC1B', 'ANKRD13B', 'PRAMEF17', 'LPAR5', 'PLEKHG1', 'PPP2R1B', 'MCM10', 'DRG2', 'LVRN', 'CDC26', 'INO80B', 'HBBP1', 'AJAP1', 'SELP', 'SNORD63', 'ARHGAP6', 'LTBP2', 'OR51E1', 'HOOK1', 'SCN5A', 'OR2C1', 'SIPA1L1', 'CLEC14A', 'FOXB2', 'ITPK1-AS1', 'LINC00896', 'MSRA', 'SLC44A3', 'MTHFD2', 'LRRTM2', 'SNORD98', 'SMARCE1', 'SSH2', 'ITGA3', 'SNRNP25', 'RPS18', 'CDV3', 'C19ORF71', 'CHD5', 'IL1A', 'RUNX1T1', 'CIB2', 'SEPT2', 'HCRTR1', 'SNTG2', 'RSPH9', 'DCAF8L2', 'WDR31', 'UGT2A3', 'OR10T2', 'ANKRD54', 'PAGE4', 'TOMM5', 'CPXM2', 'LINC00282', 'ZKSCAN4', 'SCAF8', 'CLCA3P', 'PQLC3', 'ZNF281', 'EXO1', 'NUTM1', 'PCDHA6', 'MYL12B', 'RAB21', 'CCDC173', 'DLG5', 'CDC14A', 'DET1', 'MAP4K5', 'IGFL2', 'RCHY1', 'OR5AN1', 'ATAD1', 'TCEB3B', 'DAPK1', 'PLEKHG3', 'RC3H1', 'GPR18', 'SNX19', 'ZBTB3', 'NUDCD1', 'SMNDC1', 'LYRM4', 'RNF186', 'TMEFF2', 'ANLN', 'CDHR2', 'FAM3D', 'OR3A3', 'USP3', 'C2CD2L', 'GID8', 'RBM26', 'TMEM101', 'C10ORF131', 'SNORA6', 'RXFP4', 'KLF10', 'KLLN', 'TMCO3', 'DMRT2', 'OR56A5', 'SOX3', 'BLOC1S2', 'FAM189B', 'TRIML1', 'ITCH', 'SDHD', 'GRAPL', 'TRPC2', 'PAK7', 'LBP', 'BTD', 'CCNI2', 'CREBRF', 'C8A', 'ACOT6', 'PGBD5', 'IGIP', 'LYN', 'POM121L12', 'RNF146', 'SMTNL2', 'FAM229B', 'DAP3', 'HSPH1', 'FKBP10', 'ECE2', 'HS6ST1', 'GNAT1', 'THAP8', 'CELF6', 'AP3S1', 'CDH9', 'C2CD4B', 'KRTAP5-4', 'LINC00200', 'PPM1N', 'LINC01018', 'TMEM59', 'NMNAT3', 'NFKBIA', 'MSX2P1', 'C22ORF46', 'NOTCH2', 'TMOD1', 'PAF1', 'SNORA40', 'RSPRY1', 'ADGRF2', 'ENOX2', 'POP5', 'MMS19', 'POLM', 'BAMBI', 'TGFB3', 'TMEM56', 'ZYG11B', 'BTBD6', 'DBNDD1', 'CEP41', 'KANK4', 'TUBB', 'COMMD3', 'GYG1', 'LRR1', 'CX3CR1', 'ZNF132', 'CORO7', 'CTSD', 'EYA1', 'KLHL26', 'SUN5', 'TTC41P', 'ZNF232', 'TKT', 'ZMIZ1', 'SMIM10', 'FAM173A', 'ATP5G1', 'SURF4', 'RPL8', 'RRAGB', 'PLET1', 'AMDHD1', 'SIDT1', 'AHSA1', 'STRBP', 'LACTB2', 'JOSD1', 'PPP1R3F', 'YIF1B', 'NR3C1', 'SATB2', 'PFDN4', 'CLUH', 'ZNF682', 'LIN54', 'ACTR3C', 'SIRPB1', 'FOXR2', 'FAM53C', 'FZD7', 'NTSR1', 'SCOC', 'CRMP1', 'PLK2', 'HNRNPCL3', 'TMSB15A', 'KALRN', 'IGSF11', 'ASIP', 'CCDC141', 'BLOC1S4', 'P2RY11', 'C10ORF111', 'OR7E24', 'UQCRB', 'ZNF837', 'CCDC64', 'LRRC18', 'MSS51', 'LCN9', 'PF4V1', 'BRD7P3', 'OTOS', 'SPAG16', 'KLHL15', 'DHRS11', 'CELA3B', 'LAX1', 'SEC14L3', 'LTF', 'PFDN5', 'KRTAP20-1', 'SLC28A2', 'SNORD115-26', 'LENG8', 'ATP5G2', 'MCEE', 'LOC100270746', 'CDK10', 'LRRC39', 'OR2A14', 'CPSF1', 'CNTN6', 'NLRP2', 'PEX12', 'TCTEX1D4', 'IFNA1', 'INTS12', 'LILRA4', 'LINGO4', 'LCORL', 'RPL28', 'KIAA1549L', 'GJB3', 'SIRPD', 'PPP2R2D', 'ZNF480', 'TRIM46', 'EIF1', 'OR4K14', 'ZNF497', 'DUSP3', 'SLC36A4', 'ANKRD12', 'CPSF6', 'AKAP7', 'KNG1', 'SPOCK3', 'CCBE1', 'HTATSF1', 'ELAVL3', 'GPR174', 'CAMK1G', 'KCTD21', 'QSOX1', 'PADI1', 'KRT38', 'TMEM55B', 'SLC7A2', 'HMX3', 'RBM4B', 'APCDD1', 'ERMARD', 'CDK19', 'VCX', 'SLC16A13', 'TAS2R14', 'SPINK9', 'INTS4P1', 'ANXA11', 'LINGO3', 'HMP19', 'ARL13A', 'RBM6', 'DGCR8', 'OBFC1', 'CTGF', 'CCL17', 'DIP2A', 'KPNA7', 'PDYN', 'ZNF280D', 'ADGRA3', 'RALGPS1', 'AKT1', 'NWD2', 'ABCA4', 'HGF', 'TP53AIP1', 'SEPT8', 'LINC00319', 'ERAP2', 'ABCA9', 'C11ORF45', 'PPP1R1A', 'SNCB', 'CSDC2', 'ROPN1', 'PROM1', 'CRYGB', 'AQP4-AS1', 'FCGR1A', 'DKFZP434L187', 'TSNAX-DISC1', 'PKIG', 'DAXX', 'MYO5C', 'PITPNB', 'HIST1H2BK', 'OR9A2', 'KCNH8', 'R3HDM1', 'BMS1P20', 'KIF1B', 'ZNF37A', 'SETD6', 'C14ORF169', 'KRTAP6-3', 'PRDX6', 'GUK1', 'ATP6V1A', 'FOLR2', 'SNAR-A2', 'WIZ', 'SNW1', 'DRICH1', 'MPLKIP', 'PAPSS2', 'CMC2', 'PLXND1', 'LGALS7B', 'SNORA45A', 'C17ORF67', 'FAM214B', 'IP6K3', 'NDUFAF5', 'MKRN3', 'BBS12', 'UNC93A', 'PKHD1L1', 'LRRC66', 'LOC283922', 'GAGE12J', 'FLJ37201', 'LOC654342', 'STAB1', 'ARL16', 'VPREB1', 'ZBTB42', 'SNORD114-6', 'PRNP', 'HSD3B7', 'TOB2P1', 'AKR7A3', 'MAMSTR', 'RANBP1', 'FCRL3', 'CNTD2', 'SLFN11', 'CAPG', 'MLF2', 'CD207', 'SYP', 'ATRX', 'MTMR2', 'SLC52A1', 'DCDC2', 'EXD1', 'COX18', 'INSL3', 'RNF13', 'CENPM', 'GSTT2', 'ASCL3', 'KCTD4', 'LINC00894', 'ANXA2P2', 'TNFRSF11B', 'TCERG1', 'NOTUM', 'BCL10', 'NUPR1L', 'USH1C', 'HSFX2', 'SLC44A5', 'CCDC28B', 'TOR1A', 'SRRM4', 'PPM1L', 'ATP6V1C1', 'FBXL16', 'C12ORF42', 'DCST1', 'ZNF225', 'C14ORF132', 'FAM122C', 'GPR37', 'GCNT1', 'SPRY2', 'GOLGA6L6', 'ANAPC13', 'UBE2V2', 'SOCS7', 'FAM160B2', 'SPIN4', 'OR2V2', 'NRXN1', 'SLC25A18', 'POLG', 'MYOF', 'ADGRA2', 'RD3', 'HAND2', 'NOL10', 'CLEC11A', 'CERS6', 'TYMSOS', 'MRGPRE', 'AIPL1', 'PCBD1', 'SH3RF3', 'AMICA1', 'ISX', 'OTOA', 'CHRNA7', 'ATP6V1B2', 'CYP2B6', 'C10ORF25', 'LYST', 'SSX9', 'TMEM79', 'WDR78', 'MDP1', 'ZNF473', 'SLC2A4RG', 'RPPH1', 'TRIQK', 'NRG2', 'GIMAP4', 'TRAF6', 'EPS15', 'XDH', 'TBXA2R', 'ATP10A', 'P2RY4', 'SLC22A24', 'KRTAP9-2', 'S1PR4', 'C6ORF141', 'LINC00895', 'HDAC10', 'ZBTB10', 'WARS2', 'PIWIL4', 'SECISBP2', 'MED9', 'C11ORF95', 'TBL3', 'G6PC2', 'HOXB5', 'FIP1L1', 'KRT12', 'BID', 'PTH', 'C11ORF84', 'PRDM13', 'SH2D3C', 'SGPP1', 'RBBP8', 'MCM2', 'BCL7B', 'PDGFRA', 'CENPP', 'SNORD91A', 'ZFHX3', 'ADAM10', 'IFI27', 'AARSD1', 'TNFRSF14', 'TBC1D3B', 'GJC1', 'MEOX1', 'PITPNM1', 'FAM89B', 'NYAP1', 'CDH23', 'SLC39A2', 'SREK1', 'BPIFA2', 'NUBPL', 'KMT2E-AS1', 'FAM120C', 'RAPGEF5', 'DMTN', 'WDPCP', 'SNORA70B', 'NRIP2', 'LYZL2', 'MXD4', 'CYFIP2', 'C8ORF46', 'SSR1', 'MYO5B', 'ZNF175', 'C14ORF79', 'OR10S1', 'LDLRAD4', 'TBC1D13', 'ZNF142', 'EVC2', 'SLC6A15', 'ARGLU1', 'CMTM6', 'GNA11', 'DENND1A', 'KRT83', 'BTN2A3P', 'PPWD1', 'RNF112', 'SYNM', 'RGR', 'EMC3', 'CCDC74A', 'HEPN1', 'EGOT', 'FLJ33360', 'TCEAL6', 'ANGPTL2', 'BCS1L', 'PPP6R2', 'VPS28', 'B3GNT8', 'LDLRAD2', 'ZNF177', 'KRT81', 'CACNA1C', 'DHX15', 'UTP20', 'GTPBP3', 'IQCC', 'DNAJC19', 'ZNF768', 'IGFBP7', 'DIS3L2', 'GAGE2D', 'ABRA', 'GPR141', 'CACNB3', 'COQ10A', 'MNDA', 'FBLN5', 'ALOX15', 'RHBDD3', 'ALOX12', 'ZNF585A', 'NUGGC', 'GRIN3B', 'GPR157', 'MT1X', 'TNC', 'ANP32A-IT1', 'XYLB', 'CTXN2', 'MMP23A', 'TMEM256', 'AHCTF1', 'LGMN', 'STBD1', 'RPS4Y1', 'RAB8B', 'RDH12', 'XIRP2', 'DDX5', 'SARS2', 'NPAS4', 'HIST1H4C', 'FAR2', 'ZNF436', 'HNRNPK', 'KANSL1', 'SLC24A2', 'PLEKHO2', 'PRSS53', 'MRAP2', 'SPPL2A', 'OR2A4', 'CHRNE', 'HENMT1', 'SENP3', 'ZDHHC23', 'HPS3', 'SPSB1', 'UBN2', 'HLA-DRB1', 'GPRIN3', 'TMEM134', 'GNG13', 'CD63', 'GARS', 'SDPR', 'KLRK1', 'GOLGA6L1', 'ZNF335', 'SPON1', 'SIRPG', 'SNORD114-31', 'SPOCK2', 'KCNH7', 'SENP6', 'CPO', 'PTDSS1', 'RHPN2', 'LYG1', 'MRGPRX1', 'GORASP1', 'CEACAM3', 'ZNF331', 'NKIRAS2', 'TADA1', 'NT5DC3', 'SDR42E1', 'GNRHR2', 'PLEC', 'ATP2B4', 'HAR1A', 'UBE2J1', 'LINC00883', 'PTER', 'UTP6', 'AOAH', 'RNF180', 'PARP8', 'BRIP1', 'ATP13A1', 'DCX', 'GRIK1-AS1', 'GSTTP1', 'C1ORF122', 'DNAJC3', 'FOXA1', 'PCID2', 'SARAF', 'PUS1', 'ZNRF3', 'ADAM7', 'CCL13', 'PLK4', 'NGRN', 'SLC2A3', 'RAD21L1', 'ZCCHC14', 'CT47A2', 'CYP2B7P', 'FRG1B', 'NXPH1', 'STX16', 'FTL', 'ZNF311', 'ARRDC2', 'FBP2', 'POU3F1', 'TUSC7', 'CRSP8P', 'BIRC6', 'KIAA1522', 'RABL2A', 'TFIP11', 'SPI1', 'VASH1', 'PFDN6', 'JUN', 'SNORD48', 'TLDC2', 'ARHGAP44', 'SLC5A12', 'PLA2G3', 'SKA3', 'KIAA1024', 'DCD', 'SIPA1L3', 'CASP8AP2', 'LOC148696', 'CEP68', 'ASPH', 'PHOX2B', 'BASP1', 'CHCHD5', 'CHIT1', 'GNS', 'GUCA1A', 'PSME2', 'CHD4', 'ST3GAL5', 'CDK2', 'SUPT5H', 'LAMTOR3', 'CEP44', 'FAM47E', 'HINFP', 'SNORA7B', 'LOC100130691', 'SAMD5', 'NDUFS5', 'PDE4C', 'C14ORF177', 'TCEAL2', 'ATL2', 'IFNW1', 'SNORD114-9', 'NFATC4', 'LOXL2', 'BMPR1A', 'TMA7', 'KCNMB2', 'DUS4L', 'LINC00174', 'TCTN3', 'TAS2R46', 'FGF8', 'LRRC56', 'SYT15', 'SNAI2', 'KATNA1', 'LOC113230', 'CCDC106', 'LINC00899', 'METTL1', 'PIK3R3', 'PRAMEF9', 'KIAA1324', 'ZNF428', 'NXF2', 'SLC38A8', 'RDH16', 'CRTAM', 'SNORD115-22', 'BRD3', 'MED30', 'MED1', 'DNAAF1', 'NUDT16P1', 'FAM170A', 'CACNA1S', 'LTB', 'POU5F1B', 'OSBP2', 'PRR12', 'GTSF1', 'PCBP4', 'FGG', 'C19ORF53', 'ERICH3', 'TEAD3', 'C16ORF58', 'POLR2A', 'HYAL3', 'PPP1R32', 'C1QTNF4', 'PDCL2', 'MT2A', 'CYP4F11', 'SMCHD1', 'MAGEA1', 'GOLGA2P10', 'OSM', 'HSP90B1', 'RHOU', 'ZNF687', 'TMEM205', 'PCDH8', 'OLAH', 'TMEM2', 'TMED6', 'PEX11B', 'PRUNE2', 'ASIC5', 'CTU1', 'SRSF11', 'ENTPD5', 'CWC15', 'MAEL', 'OTULIN', 'RAB5C', 'PPP2R5B', 'HCFC1R1', 'EIF5A', 'ACOX3', 'LBX1', 'ZSCAN20', 'SRD5A2', 'ST3GAL3', 'MYOD1', 'NADK', 'CEP128', 'C10ORF53', 'GPHB5', 'CENPF', 'PER3', 'VHL', 'KIF13B', 'KCNIP4', 'CUEDC2', 'SMCO4', 'WRN', 'WDR47', 'TUBB1', 'GNAL', 'CTTNBP2', 'SPATA33', 'TAX1BP1', 'PRORSD1P', 'SSNA1', 'TBL1Y', 'RABEP2', 'COPE', 'ASF1A', 'CTDP1', 'NLE1', 'VPS52', 'LRRC17', 'NHEG1', 'FRMD4B', 'BLNK', 'PRKG1', 'C1ORF194', 'WDR27', 'MOB3B', 'KIR2DL4', 'RPL38', 'NEK2', 'RGS3', 'C1ORF186', 'HCRTR2', 'FGFRL1', 'FBXW7', 'JUNB', 'LHX2', 'HMGN1', 'F10', 'PKD1', 'PRR27', 'CCM2', 'ARHGAP42', 'DSCAML1', 'RBM28', 'ENAH', 'SCLT1', 'CD55', 'RGS16', 'CHST6', 'RSPH3', 'SNORD4A', 'COX19', 'NXPH4', 'UBLCP1', 'SEC22C', 'NPAS2', 'ZDHHC16', 'MAGEE1', 'CST9L', 'PRAME', 'ZNF804A', 'ZNF236', 'SMS', 'PDF', 'SMYD4', 'NTN4', 'IL13RA2', 'CLEC19A', 'FOXN3', 'TENM2', 'FOXM1', 'FBXL19-AS1', 'SENP2', 'SRPX2', 'TMEM87A', 'CLIC2', 'PDCD1LG2', 'SPRR4', 'DMWD', 'PRB3', 'EIF4ENIF1', 'RNF7', 'ZNF678', 'PLA2G10', 'TACR2', 'C3ORF30', 'TIE1', 'CCDC80', 'LCE3D', 'LOC151174', 'CD3EAP', 'NR1H3', 'TPCN2', 'HPRT1', 'CFHR5', 'ZNF57', 'MEGF6', 'SCARNA16', 'SLC50A1', 'CCDC27', 'ZNF544', 'KCND1', 'KCNK2', 'SLC30A9', 'PRELID2', 'HOTAIR', 'ATP5G3', 'DUSP4', 'TM9SF1', 'KRTAP10-5', 'NAGLU', 'C9ORF41', 'MYL2', 'SNORD114-20', 'KRT80', 'KLF4', 'TCAM1P', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 3.1588842615628062e-15 NRMSE: 6.366536190343646e-16 MAPE: 2.998415405554569e-12 Pearson Correlation: 0.15584166185073778 Spearman Correlation: 0.20706272558774755 Coefficient of Determination: -2.0261410766611636 RMSE: 1.3063516520403722 NRMSE: 0.32410848311426893 MAPE: 486.16529258918877 Predictor: ElasticNet Pearson Correlation: 0.5062829090970252 Spearman Correlation: 0.5060846077901974 Coefficient of Determination: 0.1346474850601248 RMSE: 0.685808041195059 NRMSE: 0.13822037632163553 MAPE: 678.9944237646383 Pearson Correlation: 0.4721419756437557 Spearman Correlation: 0.40327772900204867 Coefficient of Determination: 0.11254988214582518 RMSE: 0.7074365420758059 NRMSE: 0.17551643479278667 MAPE: 321.02709841361843 Predictor: RandomForests Pearson Correlation: 0.6065227659604455 Spearman Correlation: 0.6084813532894451 Coefficient of Determination: 0.2767891123609013 RMSE: 0.6269581044284198 NRMSE: 0.12635953492319565 MAPE: 601.2769288794725 Pearson Correlation: 0.47893107265512985 Spearman Correlation: 0.45377036386693986 Coefficient of Determination: 0.18997021910154288 RMSE: 0.6758744147680683 NRMSE: 0.1676858072664289 MAPE: 281.3143183873251 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['TRMU', 'TULP4', 'MRPS35', 'IPPK', 'ARHGEF9', 'TRIM63', 'CBR3', 'EIF2S2', 'TSPY3', 'NF1', 'GPR34', 'HCAR3', 'DOCK5', 'FAM118B', 'SOX17', 'DZIP1L', 'TBPL2', 'OAS3', 'PFDN1', 'FBXO44', 'NUDT12', 'HEXIM2', 'KLHL6', 'ISCA1P1', 'TNR', 'CNNM2', 'PALB2', 'KMO', 'TLR7', 'SNAR-D', 'ZBTB45', 'GOSR1', 'CES1P1', 'RNF138P1', 'NR2C2AP', 'CHL1', 'C17ORF49', 'ASL', 'PSAT1', 'GALNT4', 'OC90', 'SNORD114-18', 'RBBP7', 'CD22', 'OR2AE1', 'METAP2', 'KRT73', 'ARMCX2', 'RPL11', 'UBE2QL1', 'SLC6A18', 'FGD3', 'TMED5', 'HNRNPH1', 'ROCK2', 'HGH1', 'ZNF843', 'LINC00282', 'NCAM2', 'B4GALT2', 'GULP1', 'CRLF2', 'FXYD4', 'CCR10', 'ZNF521', 'CD8A', 'TOPBP1', 'SIX5', 'CAV1', 'DEFB105A', 'MOGAT2', 'OR10S1', 'LYPD8', 'RAB42', 'SMCO4', 'INTS4', 'TMEM249', 'KMT2E-AS1', 'SOX18', 'LUC7L3', 'SUPT5H', 'STAT5A', 'GLIS3', 'OR13G1', 'PLA2G4C', 'SOX3', 'FOXQ1', 'KCTD20', 'EMCN', 'ERBB4', 'DRAM2', 'MYOM1', 'SMG1', 'DCUN1D4', 'UBTD1', 'ROR2', 'UCP3', 'RNF144A', 'FGF4', 'CIDEB', 'CKLF', 'INO80C', 'CSGALNACT1', 'ODF3B', 'TSN', 'CALML4', 'SSMEM1', 'MRPS23', 'PRKAB2', 'DOCK2', 'CAPN5', 'MTMR9LP', 'IFT27', 'CNTN1', 'NISCH', 'IGSF21', 'MROH2B', 'RBP7', 'C1ORF95', 'OOEP', 'PAX8', 'CLDND1', 'SLC39A8', 'SLC35F4', 'SNORD51', 'DCUN1D5', 'NUP35', 'USP11', 'LMLN', 'PDILT', 'HRASLS5', 'PARP12', 'NXPE1', 'RPLP1', 'GUSBP2', 'NUDCD3', 'SLC35A5', 'SPR', 'RNASEH2C', 'SH3GL2', 'DGCR9', 'DMTF1', 'PRR15', 'ARHGAP36', 'UGT3A1', 'SBSPON', 'TCF19', 'SNRPA', 'OR7G2', 'FDPS', 'RGCC', 'KLF14', 'BACH2', 'SLC4A10', 'KRTAP22-1', 'PCBP1', 'VTI1B', 'DCAF6', 'STK3', 'PTPRR', 'CDH20', 'ABLIM3', 'OR4D2', 'S100A7', 'ACTRT3', 'WHAMMP3', 'TRIM52', 'AGT', 'EME1', 'LINC01548', 'TPTE2P3', 'ZNF599', 'LYPLAL1', 'BNC1', 'MIEF1', 'SWAP70', 'WNK3', 'RRBP1', 'ATP10A', 'GOT1', 'PEX3', 'VAT1L', 'NDUFAF7', 'ATP13A3', 'ABCA8', 'SURF4', 'LLGL1', 'POLL', 'PDIA2', 'TTLL3', 'MXRA7', 'OR2A2', 'AQP7P3', 'OSER1', 'TOB2P1', 'MT3', 'PEX7', 'SLFN11', 'DZANK1', 'CBX3', 'CD6', 'TMEM108', 'EFNA5', 'RNF123', 'TOLLIP', 'EIF3A', 'KMT2E', 'PCDHB4', 'PRKAR2A', 'POLR3D', 'ADGRG1', 'KLRD1', 'KRT9', 'ZCCHC9', 'MCMBP', 'NPFF', 'HSF2', 'HMGA1', 'CRB1', 'SIPA1L2', 'OR52N2', 'CAV3', 'ARMC10', 'PAXIP1-AS1', 'SLC2A7', 'BEND7', 'RPL7A', 'SLC22A2', 'NPIPB5', 'MRPS28', 'CNTRL', 'ZBED9', 'BCL2L10', 'SPTBN1', 'DNAJB7', 'TMEM205', 'RPL36', 'PPOX', 'SYT2', 'ZNF321P', 'KGFLP2', 'AMPD2', 'CMTR2', 'RHOU', 'TSPAN10', 'SNORA49', 'FSHB', 'HILS1', 'ASAP1-IT1', 'RUFY3', 'ATP6V0A4', 'CLPSL2', 'SOAT1', 'PLIN1', 'YWHAB', 'GUCY1A3', 'IFIT2', 'UCKL1', 'GAGE12F', 'CHN2', 'GAL3ST1', 'EDF1', 'TAC1', 'CPNE2', 'HINT2', 'SNORA71D', 'CIC', 'RAD1', 'FKRP', 'STEAP2', 'VAPA', 'ATP6V1F', 'PRR18', 'DAB2', 'MROH8', 'TSC22D3', 'CATSPER3', 'CNBD1', 'DNASE1L1', 'C6ORF201', 'QRICH1', 'PCDHGA5', 'IFT122', 'PPP2R4', 'TAF7', 'AP3D1', 'LAIR2', 'THEMIS', 'DCST1', 'DNMT3A', 'CNTNAP3', 'PRL', 'LDLRAD1', 'ARHGAP19', 'JAKMIP1', 'PRSS50', 'HAGH', 'ARPC1B', 'RPP25L', 'HEPACAM', 'RUNDC3A', 'EDN2', 'METRN', 'GSAP', 'CEP135', 'CPT1A', 'BCO2', 'CD48', 'CDK19', 'LRRC47', 'CDC14B', 'CAMKK1', 'RPSAP58', 'ZNF346', 'HECTD4', 'TMEM161A', 'RABAC1', 'LOX', 'ASB9', 'LGALS1', 'PPP1R9A', 'FAM127C', 'ZNF354B', 'TGFBR2', 'MAPK8IP1', 'DBX2', 'TIMELESS', 'BCL2A1', 'COPB1', 'LOC284661', 'SPRR2A', 'KRTAP27-1', 'BRWD3', 'ZNF436-AS1', 'MBOAT1', 'RBSN', 'APCS', 'OR10A5', 'ANKDD1A', 'CDKN2D', 'PRR27', 'OGG1', 'PRAMEF1', 'CLCA3P', 'KIDINS220', 'PRKD1', 'TTC30B', 'LOC400940', 'CCNG2', 'BPIFB6', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.9505119621686422 Spearman Correlation: 0.8603165919089654 Coefficient of Determination: 0.903472988911254 RMSE: 0.15027080813758395 NRMSE: 0.036264886004677935 MAPE: 36.30627947410643 Pearson Correlation: 0.4369834981421149 Spearman Correlation: 0.44868793288459674 Coefficient of Determination: -1.8410226098061977 RMSE: 0.9051988526218446 NRMSE: 0.3224216750211379 MAPE: 115.01394724084581 Predictor: ElasticNet Pearson Correlation: 0.6622711999267251 Spearman Correlation: 0.5932802728977391 Coefficient of Determination: 0.1973294271253352 RMSE: 0.4333301062565732 NRMSE: 0.10457564646489205 MAPE: 104.26666296568354 Pearson Correlation: 0.7478152347951299 Spearman Correlation: 0.5834211296458882 Coefficient of Determination: 0.19634312726932102 RMSE: 0.4814397904113692 NRMSE: 0.1714834516158038 MAPE: 73.90486351820041 Predictor: RandomForests Pearson Correlation: 0.8578735677728657 Spearman Correlation: 0.7209812464872909 Coefficient of Determination: 0.729685441446481 RMSE: 0.2514692641136332 NRMSE: 0.060687130852531114 MAPE: 54.30359345865029 Pearson Correlation: 0.8455812549030316 Spearman Correlation: 0.7080036928664069 Coefficient of Determination: 0.7109375076248055 RMSE: 0.28873705416555273 NRMSE: 0.10284489907944888 MAPE: 42.76343502515354 Protein: CCND1 x_train_column_count: 859 x_train columns: ['ZNF385D', 'CASS4', 'ARL5C', 'MBD1', 'CCK', 'ZDHHC16', 'GMIP', 'LINC00961', 'BLMH', 'AKAP12', 'WRAP53', 'RIBC1', 'MROH5', 'TMEM232', 'MEF2B', 'EFTUD2', 'TFAP2C', 'SHANK1', 'MAP2', 'C3ORF52', 'PAXBP1', 'AGAP2-AS1', 'MYPOP', 'TBRG4', 'FLOT2', 'LCE6A', 'EIF6', 'DNAJB4', 'KRT17P5', 'ZNF77', 'SCLT1', 'SLC35F5', 'NEIL2', 'FAM58BP', 'RANBP1', 'GRIK1-AS1', 'IGSF9', 'ZBTB8B', 'RPL23', 'MAPRE2', 'MICALCL', 'DIO3OS', 'RFX4', 'SLIT3', 'AFMID', 'ZFAND3', 'DIDO1', 'RAB11A', 'PIWIL3', 'TECTA', 'SLBP', 'MTUS1', 'POPDC2', 'LINC00889', 'FBN3', 'ENTPD8', 'SHISA9', 'DCTN6', 'ARHGAP42', 'UBXN10', 'RAB41', 'GINS2', 'ZMPSTE24', 'TNFRSF13B', 'NDRG4', 'SCARNA14', 'C21ORF62', 'RAB40AL', 'OR52K1', 'GUCY2EP', 'DRP2', 'NOXO1', 'MYH10', 'MORN1', 'MAPK15', 'LRRC2', 'AKAP2', 'CACNA2D4', 'NAGA', 'SMG1P3', 'CMTM6', 'HLA-J', 'XK', 'GUCY2C', 'NBN', 'PSMD11', 'ZMYM5', 'SLC35E2', 'SAYSD1', 'PLGLA', 'CLEC4D', 'PGA4', 'KREMEN1', 'COMP', 'HINFP', 'LY75', 'CPA1', 'ZNF546', 'FAM83D', 'AOX2P', 'LINC01558', 'SPATA31D4', 'EGFLAM', 'SNORD113-7', 'ZCCHC17', 'TPPP', 'SLC25A37', 'DDHD1', 'CDK5RAP2', 'MTRF1L', 'AGO3', 'JAK1', 'COX7B2', 'CLCN1', 'DEPDC4', 'LRRC25', 'TTLL6', 'NUMA1', 'MS4A10', 'AKAP8', 'CDK16', 'SEMG2', 'CCDC142', 'JADE1', 'SGCZ', 'ZRANB3', 'GPATCH1', 'CDS2', 'ST20', 'PLSCR2', 'STYX', 'ASIC5', 'C16ORF74', 'OR2V2', 'FAM169A', 'KRTAP10-2', 'XPA', 'MGST2', 'SLC22A24', 'SSPO', 'ZNF705D', 'ZEB1', 'ZNF429', 'CLCA2', 'OR2S2', 'SNX4', 'ZNF469', 'CSTA', 'NLRP14', 'NRBP1', 'TM4SF4', 'RIPPLY1', 'AP1G1', 'DCP2', 'SPINK5', 'PNLIPRP3', 'CLEC3A', 'UQCRBP1', 'STRADB', 'KLHL4', 'PRPF40B', 'DEFB106A', 'FBXO11', 'ERCC3', 'KCTD3', 'OR2L2', 'SYT17', 'DDTL', 'CR2', 'XKRY', 'FLRT3', 'CIDEA', 'NRSN1', 'TNK2', 'JCHAIN', 'SEPHS2', 'ZNF625', 'TMIGD1', 'GRASP', 'CLMP', 'DCUN1D2', 'SYNJ2BP', 'BTBD11', 'SH3D19', 'OR6C2', 'GTPBP10', 'POLM', 'RNF208', 'TOMM7', 'GJD3', 'DIRC2', 'HIVEP1', 'C1ORF109', 'BARHL2', 'ZNF296', 'FBXO34', 'B4GALT3', 'APMAP', 'NXF3', 'ZNF117', 'KIAA0355', 'MEPCE', 'IFNA10', 'SRP9', 'ASTN1', 'LRRC45', 'DUSP23', 'FAM105A', 'RNF2', 'EEF1DP3', 'UQCRB', 'RBL2', 'EIF3A', 'PRKCQ', 'FXR2', 'LBX1', 'SNORD70', 'COX4I2', 'KIAA0040', 'KIF3B', 'RPS16', 'SLC5A6', 'FAM9C', 'IRAK1BP1', 'OR4C46', 'DKKL1', 'IL20RA', 'IFIT1', 'FSCB', 'INPP5A', 'C1ORF159', 'SLC35F3', 'TPT1', 'CLN6', 'GREM1', 'AQP7', 'DENND4B', 'EIF2S3', 'HEYL', 'DDX18', 'HNRNPA3', 'CXCL8', 'GNA14', 'PREX1', 'KATNBL1', 'VWA3A', 'KRBA2', 'RAB11B', 'LINC00552', 'TUG1', 'EPHA1', 'MED27', 'VARS', 'BAHCC1', 'H1FX-AS1', 'ZIC2', 'PDE6H', 'CABP5', 'SUCNR1', 'NUP98', 'GCSAM', 'ZNF833P', 'IGFL1', 'KBTBD8', 'KDM4B', 'ITPA', 'TBC1D3', 'FGG', 'SNORD26', 'OR10H2', 'WDR83', 'RFC1', 'RAD50', 'ALMS1', 'XKRY2', 'UBE4B', 'CNST', 'TTC19', 'NUBPL', 'LOC284009', 'STH', 'ANP32E', 'SFXN5', 'PRKAR2B', 'FSTL1', 'TSTD2', 'MSRB3', 'CCDC174', 'SLC16A13', 'ANXA8L1', 'NOX3', 'ARHGEF7', 'FBXO10', 'UG0898H09', 'LOH12CR1', 'HIF3A', 'CYP4F11', 'FAM214B', 'CAMKV', 'C1ORF158', 'USP15', 'NIP7', 'HIST3H2BB', 'CES4A', 'SORBS1', 'ASB12', 'TMEM104', 'NET1', 'SRGAP1', 'ATP2A2', 'SV2C', 'WBSCR22', 'IFNL3', 'KCMF1', 'FAM151B', 'IFNA14', 'MCTS2P', 'TAB3', 'EPCAM', 'COQ10B', 'MSMO1', 'RBMS3', 'ANKRD13A', 'FSHB', 'CREBBP', 'XIRP2', 'SOD1', 'RHBDD2', 'NHSL1', 'C22ORF46', 'MYOF', 'PTRHD1', 'KLF9', 'DNAJC13', 'RGN', 'COL4A6', 'FAM86JP', 'SPRTN', 'C17ORF85', 'PRDM10', 'FTH1', 'FAM225A', 'DDHD2', 'CX3CR1', 'JMJD6', 'SERF1A', 'MELK', 'NEDD8', 'PCNP', 'FLJ37201', 'KCTD5', 'PTPRU', 'WDR72', 'RPLP0', 'C16ORF90', 'SLC35F1', 'APOL5', 'SNORD116-15', 'RAD23A', 'XKRX', 'MYOM2', 'OR9K2', 'MYOM1', 'GLIS3', 'KCTD1', 'RASSF3', 'ARHGAP1', 'RNF39', 'FUT9', 'PTP4A1', 'CDK1', 'IGF2R', 'SNORD78', 'ZDHHC14', 'PICK1', 'FAM71E2', 'SLC44A3', 'CNTF', 'RAD51AP2', 'PADI6', 'SNORD114-19', 'KRT25', 'PKD1', 'NDUFB8', 'DCTN2', 'CCDC144CP', 'MED26', 'TOMM22', 'TCL1A', 'POLR1D', 'GGCX', 'CDH24', 'DNAJC21', 'ADGRF4', 'ZAR1L', 'EHF', 'DUSP15', 'HP', 'TMEM52B', 'RTEL1', 'TICRR', 'MAPK8', 'ECM2', 'SH3BP5L', 'HEBP2', 'NFATC3', 'CDC27', 'LOC647859', 'PCDH11Y', 'LRRC73', 'SEMA7A', 'LINC01096', 'RSU1', 'C1ORF54', 'FAM217A', 'ARFGAP1', 'SCIMP', 'MAZ', 'HNRNPH1', 'CHAC1', 'PCK1', 'TECRL', 'SLC22A16', 'ZP4', 'TTC39A', 'MDH1B', 'SND1-IT1', 'KCNV1', 'ZDHHC15', 'NDUFB5', 'KLHL38', 'DHX33', 'GPT2', 'RNASEK', 'NDUFAF2', 'SPRR2C', 'PLD2', 'FLCN', 'PIP5K1C', 'GPR180', 'SLC45A3', 'CIAPIN1', 'GTF3C5', 'SNRNP200', 'CYP11A1', 'CCDC102A', 'RNASE2', 'KHDC3L', 'SMIM3', 'FAM83F', 'KRT81', 'NFAM1', 'USP28', 'SIAH3', 'EXOC3L1', 'PCDH20', 'SRPK1', 'PEX2', 'ZIC4', 'SLC30A5', 'RAD18', 'ARPC5L', 'ERCC8', 'GHRLOS', 'ETV1', 'WDR43', 'CETN1', 'PAFAH1B3', 'KIF17', 'MTOR', 'CXCR4', 'PCDH11X', 'MRPS23', 'PM20D2', 'SLC4A1AP', 'CIZ1', 'SYAP1', 'KCP', 'GPR39', 'FAM181A-AS1', 'CD1B', 'ARG2', 'CTPS2', 'SPEF2', 'DHDH', 'TMEM74', 'TACC1', 'ITCH', 'CRYM-AS1', 'OR5K2', 'ATP5D', 'PLEKHG3', 'PI4KB', 'FBXO6', 'CUTC', 'MRFAP1', 'RAB4A', 'CKMT1B', 'SNORA30', 'ATP6V1F', 'IFIT3', 'HNRNPU', 'LSM7', 'TTYH3', 'UBE2V2', 'CHKA', 'DAPK3', 'DLG2', 'NAA35', 'MYH9', 'CEACAM7', 'MBD5', 'NAV2', 'DUS3L', 'MBL1P', 'C1QTNF1', 'LOC389033', 'SPAG1', 'CDH3', 'MPV17L2', 'EXOSC4', 'RIPPLY3', 'RASAL3', 'MCM3AP', 'WDR93', 'ARHGAP27', 'LINC00852', 'OPRL1', 'CCT4', 'WDR7', 'ZNF17', 'FAM74A3', 'ZFP30', 'POLI', 'FGL2', 'SLC7A1', 'LSG1', 'GPHA2', 'EGFL7', 'HPS5', 'HDAC9', 'MAT2A', 'SH2B1', 'ZNF394', 'FREM2', 'PLA2G6', 'PCDHB10', 'TTTY6B', 'THBS3', 'HSPB2', 'RELL1', 'FAM175A', 'SLTM', 'CCDC173', 'C10ORF88', 'PSKH2', 'DERL1', 'SASH1', 'DYDC1', 'CT47A9', 'PTBP1', 'IRS1', 'ARHGAP12', 'PRKCG', 'SPATA31D5P', 'CCDC117', 'BBS9', 'THOC5', 'SAMD4B', 'ZNF284', 'SNORD58A', 'INTU', 'KIF20B', 'TOP3A', 'SLC12A3', 'RBM24', 'ADH7', 'PNPLA4', 'CYP24A1', 'BTG3', 'KIF6', 'KATNAL2', 'PKIG', 'NTHL1', 'TRIM62', 'C8ORF59', 'SUCO', 'C10ORF82', 'C3ORF62', 'UMODL1', 'TAF1A', 'ZNF222', 'DTNBP1', 'GRAMD2', 'EFCAB7', 'MS4A7', 'MTDH', 'PDZD4', 'DNAJB3', 'JOSD2', 'ARHGEF6', 'OR4C15', 'NOX5', 'MC2R', 'ZC4H2', 'RASA4', 'SCAMP3', 'WDR49', 'PARP14', 'SPATC1L', 'ZNF738', 'SOX1', 'CBWD6', 'ARL4A', 'CTXN2', 'DNAAF2', 'AGRP', 'FAXC', 'IL1RAPL1', 'HEPACAM', 'SGOL2', 'MYEOV2', 'VPS18', 'CHRNA3', 'DDB2', 'C2ORF76', 'PAFAH2', 'CRYBB1', 'DSN1', 'CDK5R1', 'SASH3', 'SLX4', 'HECA', 'SNORD114-9', 'LGALS1', 'TTC41P', 'RPL12', 'TSTD1', 'SDHAF3', 'BMP7', 'SCARNA6', 'ZNF829', 'IL26', 'LRRC3B', 'TMEM95', 'KIF18B', 'ZNF579', 'MASP2', 'GALNT2', 'LOC644936', 'VSX2', 'SIAE', 'GBP4', 'SRSF8', 'OR11H1', 'VILL', 'CLUH', 'ZNF271P', 'N4BP2L2', 'ZFAND1', 'N6AMT2', 'MSH3', 'LOC100272217', 'KLHDC8B', 'PRODH', 'LOC100128573', 'C11ORF54', 'PDE3A', 'CRB3', 'MXRA7', 'SGCB', 'WDR83OS', 'SKIV2L', 'SLC25A14', 'DYM', 'RRP7A', 'RELN', 'WTIP', 'FKBP6', 'PHACTR2', 'PADI3', 'ZBTB8OS', 'SEPW1', 'MYEOV', 'C16ORF72', 'SLC22A1', 'ACOT12', 'LPGAT1', 'TPM4', 'ARL13A', 'ADRBK2', 'ECT2L', 'NOM1', 'SNORD54', 'MTERF3', 'NDUFA11', 'LOC285740', 'ZBED8', 'RDM1', 'C11ORF65', 'HIST1H1E', 'ZSCAN21', 'KLHDC1', 'SLC25A24', 'C1ORF189', 'ARL9', 'TINF2', 'CDS1', 'TCHP', 'MDN1', 'TMEM59L', 'HCAR3', 'CCDC70', 'TMSB15A', 'SNORD114-14', 'WDR88', 'USP31', 'ANO1', 'PIGG', 'EBNA1BP2', 'DDC', 'ABCB6', 'PKNOX1', 'OR4F5', 'SNORD115-33', 'ZNF423', 'AP3M2', 'PAM', 'CAPN3', 'SCFD2', 'TAOK1', 'NICN1', 'LINC00909', 'COL1A1', 'BTBD7', 'C4ORF50', 'COG2', 'RPS6KL1', 'ANKRD30BL', 'SAA2', 'NFKBIB', 'PSAPL1', 'ZNF879', 'PEX12', 'SNRNP25', 'MED25', 'BCO2', 'GLRA2', 'STOX2', 'GLT1D1', 'C15ORF26', 'LTBP4', 'FCER1G', 'CDK11B', 'PRELP', 'WFIKKN1', 'RTN4', 'SPATA6L', 'TMEM35', 'FAM210A', 'FBXO7', 'WBP1L', 'POMK', 'PRR14L', 'CDSN', 'SPSB1', 'DNAJA3', 'RRP15', 'ADGRB3', 'TSACC', 'OR5AP2', 'HRC', 'SEC13', 'ICE2', 'IFNGR2', 'C10ORF11', 'COQ10A', 'KHNYN', 'DYNLRB2', 'NR5A2', 'SLC34A1', 'BRCC3', 'UBE2A', 'TMEM256', 'MICU2', 'SLC10A2', 'INAFM1', 'CXORF40A', 'SRXN1', 'IER2', 'E2F4', 'ZNF322P1', 'FOXE3', 'SRSF11', 'SEPT3', 'SCGB1D2', 'PAPL', 'LGALS9C', 'TPCN1', 'KLRB1', 'SS18L1', 'SPANXN4', 'CNKSR1', 'METTL12', 'PTK2B', 'SLC27A1', 'ZNF594', 'CDH15', 'PSMB4', 'CCSER1', 'C5AR2', 'LRFN1', 'TBC1D22B', 'PRICKLE2', 'ADAMTS14', 'ALPP', 'EYA1', 'MRPS31', 'ZBTB3', 'ZNF473', 'TOB2P1', 'TIGD6', 'FAM227A', 'LCE1F', 'WDR66', 'PLIN4', 'GPM6B', 'BCKDHB', 'APOPT1', 'KRTAP5-8', 'SLC35A4', 'C9ORF129', 'PRKAB2', 'NFIX', 'SLC36A3', 'HIP1', 'TBC1D2B', 'BEND3P3', 'MAP2K6', 'MTCH2', 'POC5', 'RUSC1', 'FGD3', 'BEGAIN', 'SBF2', 'PLEKHA8P1', 'SLC5A11', 'HOXA11-AS', 'PRAMEF6', 'TMEM249', 'RASSF5', 'EPPIN', 'SERINC4', 'KLHDC3', 'ZNF260', 'STC1', 'BLCAP', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.1200147655058351e-15 NRMSE: 6.73320487613372e-16 MAPE: 2.904262781621447e-12 Pearson Correlation: 0.06257352875663946 Spearman Correlation: 0.08777192469027413 Coefficient of Determination: -2.3692527692651377 RMSE: 0.43125812699104454 NRMSE: 0.3071464068935136 MAPE: 2942.4614611104994 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: RandomForests Pearson Correlation: 0.5587262704676333 Spearman Correlation: 0.5344183219025055 Coefficient of Determination: 0.25337364884678815 RMSE: 0.20642244173445168 NRMSE: 0.12409520249513153 MAPE: 334.0750513310874 Pearson Correlation: 0.5033448491958938 Spearman Correlation: 0.4925080479953176 Coefficient of Determination: 0.2274389713409668 RMSE: 0.2065080062125112 NRMSE: 0.14707709404913624 MAPE: 1001.4719048385122 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['PSD', 'NFYC', 'TMIGD1', 'KHNYN', 'C1ORF131', 'FAM205BP', 'CLEC18B', 'CEL', 'KDM4A', 'HTR1B', 'HNRNPAB', 'KLHDC1', 'SGCA', 'CCDC54', 'NCOA5', 'RBSN', 'SNHG5', 'NUDC', 'RAD9A', 'TBC1D3P1-DHX40P1', 'SH2B3', 'ITGB2', 'AHNAK2', 'PARP15', 'IL15RA', 'IKZF1', 'ANKRD55', 'OPN4', 'FETUB', 'THRB', 'LGALS9C', 'SUN2', 'SOX10', 'HSP90AB2P', 'MGC16275', 'DEFB104A', 'VCPKMT', 'SNORD62A', 'FKBP6', 'STC2', 'CTNND2', 'OR6M1', 'VNN3', 'CYP2A7', 'CXORF38', 'SPTLC2', 'ACVR1', 'TTTY23', 'TMPRSS3', 'RFPL1S', 'RND2', 'SPAG6', 'TMEM59L', 'IGSF8', 'HPS3', 'ABO', 'ZFHX4-AS1', 'LOXL2', 'ANGPTL3', 'HLA-DRB1', 'PAICS', 'MICAL1', 'GGTA1P', 'PRIM2', 'PSRC1', 'GNPDA1', 'OR6V1', 'ADD1', 'MCU', 'ABCF3', 'SCN1B', 'ARMC12', 'EML2', 'CAV3', 'PDXK', 'RRP1B', 'PPIG', 'CLDN11', 'ODF3', 'GTF2IRD1', 'SNORA44', 'HCRTR2', 'KLRF1', 'EMC6', 'CPNE1', 'CMPK1', 'DLL1', 'FAM201A', 'CGB', 'OR6S1', 'PSKH1', 'MYT1', 'HIST2H3C', 'PGK1', 'NQO1', 'HDAC10', 'TRA2B', 'PSMA6', 'ABHD15', 'ZXDB', 'PRAP1', 'CNNM2', 'TRIM8', 'TSPAN32', 'CCDC71', 'CHSY1', 'PLEKHG3', 'NR1I3', 'RNF10', 'PTGS1', 'TFEB', 'DTWD2', 'GRB2', 'EVA1B', 'ARL17A', 'NHLRC1', 'RPS3', 'TMTC2', 'LINC00301', 'ETFA', 'TBC1D3P2', 'HPGDS', 'ZNF44', 'RIIAD1', 'SLC1A3', 'SLC35F1', 'GSTM2', 'ZRANB2', 'TMOD3', 'SULT6B1', 'DHODH', 'ZNF805', 'EME1', 'XKR8', 'USP5', 'CLIP2', 'THAP8', 'RSPH3', 'SNORA16B', 'SNORD91A', 'RC3H2', 'CFHR4', 'GPBAR1', 'IQSEC3', 'USP3', 'DOK5', 'LRBA', 'PARK2', 'IARS', 'TNFRSF10A', 'RAB10', 'MPZ', 'C14ORF132', 'LRCH3', 'ASB16', 'HYAL1', 'PARVA', 'APITD1', 'CHGA', 'ANAPC16', 'CUL5', 'TSHR', 'FAM167A', 'OR8D4', 'ADSL', 'TTTY10', 'RNF214', 'STAM', 'TARP', 'MANEAL', 'CBL', 'MAN1A2', 'KIAA1522', 'LOC153910', 'TRIM69', 'OR5B12', 'SLAMF9', 'HNRNPH2', 'DSCAM', 'AKR1D1', 'FBXO43', 'TMEM102', 'CACNA1E', 'TRDN', 'ZNF793', 'PUS7L', 'LNX2', 'CACTIN', 'SNORD114-3', 'DOC2B', 'METAP2', 'MROH1', 'IL36G', 'LINC00265', 'RASSF4', 'KCTD17', 'PADI1', 'INPP5A', 'DSCC1', 'AK2', 'ENTPD8', 'PMPCA', 'POU2AF1', 'KRT28', 'MCM3', 'SH3PXD2A', 'PHACTR3', 'ARMC8', 'DMP1', 'SCFD1', 'CYMP', 'SPAG7', 'DLG5-AS1', 'DYNLL2', 'CCAR1', 'ZDHHC12', 'SLC22A9', 'ZNF32', 'GMDS', 'ARHGAP33', 'URAHP', 'MATK', 'FAM173A', 'ZNF511', 'ZNF320', 'ANKRD18DP', 'PLRG1', 'MASP1', 'MSGN1', 'LOC729603', 'VAMP1', 'ZNF331', 'RNF112', 'C9ORF91', 'SLCO2A1', 'OSGIN1', 'IFT22', 'ZBED4', 'C1ORF226', 'MKRN1', 'PGBD4', 'TRIM67', 'PLCG2', 'PRKRIR', 'LINC00635', 'CYP26C1', 'FAM120AOS', 'WDR34', 'ALOX15', 'HOMER3', 'ELOVL1', 'KDM5B', 'TMTC4', 'ERBB3', 'C3ORF67', 'SP9', 'WIPF3', 'TMEM248', 'IFNB1', 'FAM81A', 'ADAD1', 'MAX', 'GRIA1', 'TTC21A', 'ATP1A1-AS1', 'VWA5B1', 'CDH1', 'HS3ST2', 'BIRC7', 'NME3', 'LOC728554', 'RSRC2', 'TRIP12', 'HMGB4', 'ZNF74', 'ATG16L1', 'C1ORF228', 'TBC1D14', 'CCDC186', 'MUL1', 'ZSWIM1', 'NEIL3', 'CDCA7L', 'MEAF6', 'KIF1C', 'PHF2P1', 'C12ORF50', 'KAT2B', 'VILL', 'ZFYVE9', 'SBK1', 'PAPD7', 'SCARNA4', 'FAU', 'CSRP2BP', 'MAPT-IT1', 'SYBU', 'PRDM8', 'TSNAXIP1', 'VASH1', 'XCL2', 'IL10RB', 'CYP3A43', 'OR1J1', 'GALNT4', 'DFNA5', 'CLCN7', 'TAAR5', 'NHLRC4', 'DPM2', 'ZIM2', 'RBM19', 'FUS', 'NRGN', 'PLAC9', 'TMEM263', 'UBE2MP1', 'ALDH3B2', 'PABPC5', 'MMD', 'KCNK13', 'WIPI1', 'MCM3AP', 'MRPL30', 'EIF3G', 'CHRNA10', 'MTSS1', 'HCG27', 'SNORD69', 'PSMA5', 'ACAP2', 'RHOV', 'THEM4', 'HEG1', 'XKR4', 'CLEC17A', 'POLE4', 'ADGRF3', 'EFTUD2', 'CTSF', 'NCAPD3', 'ADAM11', 'MC4R', 'TIGD4', 'HLA-DQB1', 'FOXQ1', 'RAB11FIP5', 'RPL18', 'RNF215', 'LOC606724', 'CNKSR3', 'MFSD8', 'FAM103A1', 'ARGFXP2', 'SGCB', 'FAM3B', 'UGT2A1', 'UCMA', 'CEACAM1', 'SLC38A8', 'HIST1H3D', 'IMMP2L', 'B4GALNT4', 'LSMEM2', 'USP27X', 'CYP2E1', 'HSD17B10', 'SSR2', 'DSC2', 'C11ORF58', 'DPY19L2P2', 'SPAG16', 'TXNDC9', 'SLC10A1', 'PARN', 'DNAJB6', 'S100A14', 'ANXA4', 'SNORD18A', 'SNCAIP', 'CRLF1', 'NIM1K', 'EBF4', 'MEX3A', 'MFGE8', 'MLXIP', 'DLG4', 'RSPO4', 'STAP2', 'GLI2', 'IL11', 'PAPSS2', 'SLC13A5', 'NKAP', 'TET1', 'ARNT2', 'KATNAL1', 'RNF141', 'PCSK7', 'CCDC18', 'TPCN1', 'MYOF', 'EVX2', 'XPA', 'KANK2', 'DBP', 'CRIPAK', 'ABHD16A', 'CNTNAP1', 'TOMM70A', 'MSH5', 'NLRC4', 'NMNAT1', 'LINC01312', 'SERP2', 'RPS5', 'RASSF6', 'CCL3L1', 'UBXN4', 'NTF4', 'SSX3', 'SETX', 'ATP11A', 'APMAP', 'GPR17', 'BRD8', 'TIAL1', 'OR8B3', 'GPR18', 'SSX4', 'ZSCAN32', 'TMC1', 'CST1', 'PRSS21', 'DNAJC3', 'LOC100240735', 'SMR3A', 'SHANK3', 'SMN2', 'CCDC170', 'OLIG3', 'RNF121', 'BAZ1B', 'NTRK2', 'INSRR', 'TLN2', 'VPS13A', 'SNORD88A', 'CCR10', 'PPP1R1A', 'CA14', 'NAA60', 'PPFIBP1', 'SERPINB6', 'EMX1', 'MAFG-AS1', 'MAGEA6', 'RAP1GAP', 'ARL8A', 'GUCA2A', 'MICALL2', 'PRLH', 'C14ORF166', 'POM121L2', 'DNAJC5G', 'RENBP', 'RNF207', 'C7', 'ZNF596', 'AFMID', 'RASSF2', 'KRTAP5-4', 'MLLT6', 'LRP1', 'TMEM138', 'CTAGE6', 'CNTN6', 'DCUN1D5', 'FBP2', 'DUSP11', 'PLET1', 'SOX14', 'PHLDB1', 'TRIM16', 'SNORA45B', 'DEFB116', 'PLCD1', 'ESRG', 'RTN4', 'SPAST', 'FAM155B', 'SGK2', 'PCDHGA7', 'MBLAC1', 'CLK3', 'ZFYVE27', 'RPS12', 'CGA', 'SDC2', 'MAP3K14', 'OR5AP2', 'HOMER1', 'MAST1', 'TFF1', 'DDOST', 'LINC00667', 'ZSWIM6', 'THAP7-AS1', 'ENPP5', 'PTGDS', 'CLASP2', 'NOX5', 'IL24', 'FAM196B', 'NTM', 'ACBD7', 'MYLK', 'ITFG3', 'HINT3', 'P2RY1', 'SLC27A1', 'CRELD1', 'DNAH5', 'MGAM2', 'ALDH3A1', 'SIX3', 'SDHAF1', 'NYAP1', 'HAL', 'SDHAF4', 'ESRRA', 'KCTD14', 'SPATA31E1', 'TOPAZ1', 'H2AFJ', 'SIX6', 'GZMH', 'C14ORF93', 'LILRB4', 'DALRD3', 'PHF10', 'TADA3', 'PDE1B', 'TCF4', 'SNORA81', 'C7ORF50', 'NECAB1', 'HRCT1', 'SLC26A10', 'EIF2AK1', 'SNORA5B', 'GRK7', 'KIAA1324', 'TXLNB', 'ZPLD1', 'ZP4', 'ZFAND6', 'FRG2B', 'TNK1', 'CLTC', 'VDR', 'ALDH1A3', 'SP6', 'RASAL2-AS1', 'SOX21', 'ZNF213', 'CLIC1', 'WAS', 'TTC39B', 'PDE5A', 'IGFBP3', 'OR52M1', 'SNORD50A', 'RPP40', 'MAP3K9', 'ZNF212', 'CDH12', 'PINX1', 'RPL34-AS1', 'FSD1L', 'PID1', 'KLHL5', 'UBTFL1', 'C1ORF123', 'RSBN1L', 'ATPAF1', 'ALKBH5', 'CYB561D2', 'OLFM1', 'CASQ1', 'FCGR1C', 'HIST2H3D', 'MXRA8', 'ZNF252P-AS1', 'HIGD1A', 'ZDHHC13', 'FAM169B', 'HBA1', 'HIPK4', 'NETO1', 'CBFA2T2', 'RSRP1', 'C20ORF27', 'CCL28', 'CYB5A', 'TINF2', 'SLC27A4', 'SNORA37', 'CDRT1', 'CAMK1G', 'TNC', 'ZNF648', 'SMAD2', 'DMRT1', 'ASMTL-AS1', 'CTU2', 'OR14A16', 'SNORA57', 'LGALS9', 'LUZP2', 'LOC652276', 'NPIPB5', 'LRRC47', 'ZNF639', 'MLLT4-AS1', 'MRPL11', 'MRPL53', 'MYEOV2', 'SMCO2', 'ALS2CR12', 'LOC388242', 'FOXL1', 'CCNG2', 'C19ORF54', 'COG7', 'MYO19', 'NOP58', 'ZNF311', 'EIF1', 'PGBD2', 'LINC00473', 'DPH6', 'ZNF502', 'HCP5', 'BPIFC', 'ZNF536', 'RUNDC3A', 'KIRREL3', 'ATP6V1E1', 'GAPDH', 'EMG1', 'CHIC1', 'SPG7', 'C12ORF71', 'UBE2U', 'FKBP4', 'PRR5-ARHGAP8', 'KIAA1107', 'SMPDL3A', 'OR52L1', 'ADAM12', 'SSH2', 'LINC00244', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 3.783665139349576e-15 NRMSE: 6.4460962900141e-16 MAPE: 4.262933198017836e-12 Pearson Correlation: 0.3899726917692673 Spearman Correlation: 0.29117647058823537 Coefficient of Determination: -1.635274282842857 RMSE: 1.4724467033475566 NRMSE: 0.2730292422302163 MAPE: 1761.9065354930947 Predictor: ElasticNet Pearson Correlation: 0.7522348820392689 Spearman Correlation: 0.600796274623498 Coefficient of Determination: 0.28297673450407146 RMSE: 0.8629770136560101 NRMSE: 0.14702233736920287 MAPE: 806.489584575551 Pearson Correlation: 0.6354894087963381 Spearman Correlation: 0.5573553799629305 Coefficient of Determination: 0.20888595975650703 RMSE: 0.8067634568778099 NRMSE: 0.14959455903538105 MAPE: 514.8568522603571 Predictor: RandomForests Pearson Correlation: 0.8502048762798957 Spearman Correlation: 0.6831897259017116 Coefficient of Determination: 0.7181855099559076 RMSE: 0.5410211757659517 NRMSE: 0.09217186155441533 MAPE: 415.3146392473677 Pearson Correlation: 0.8035531638974533 Spearman Correlation: 0.7477660716027705 Coefficient of Determination: 0.6350721621517914 RMSE: 0.5479364215216529 NRMSE: 0.10160141322485683 MAPE: 289.25434174434525 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['ST3GAL2', 'CXCL16', 'OR51I1', 'EIF1AY', 'IARS2', 'SCARNA22', 'LIPH', 'PWRN1', 'MT2A', 'SLC1A1', 'OPN1SW', 'XXYLT1', 'SMAP1', 'MDC1', 'MARK2', 'SPATA31A5', 'PSMD10', 'TTC36', 'PRR14', 'SNAI2', 'CDC73', 'ZNF71', 'KIFAP3', 'CLVS1', 'HSBP1L1', 'LINC00663', 'P3H1', 'ATP5H', 'BPIFB1', 'DEFB109P1', 'MAP1LC3B', 'DOCK6', 'AGFG1', 'DOCK2', 'PPP1R14D', 'SUPV3L1', 'ATP6V1C1', 'UNC5CL', 'COL5A1', 'TMIE', 'DTX2P1-UPK3BP1-PMS2P11', 'KCNQ2', 'SUSD5', 'MFI2', 'PHYHIP', 'PILRA', 'OPN4', 'SAAL1', 'ICAM3', 'ERCC8', 'TRMT10A', 'IGF2-AS', 'ASB14', 'SNORD115-41', 'LPL', 'FAM210B', 'BOC', 'PCP4', 'STEAP2', 'FER1L4', 'RPS27A', 'NKIRAS1', 'APLNR', 'WDR86', 'TMEM169', 'DDX46', 'GAGE12J', 'TAGLN3', 'SUPT7L', 'PRNP', 'UCKL1-AS1', 'HKDC1', 'CNNM2', 'NLRP11', 'AICDA', 'MAP10', 'LINC01098', 'YWHAH', 'ELMOD1', 'YWHAG', 'PRKCDBP', 'FGF8', 'GAD2', 'ZG16', 'SLC26A8', 'KEL', 'ZMAT4', 'HSD17B7P2', 'HYAL3', 'SRR', 'TAF4B', 'METTL24', 'MCM4', 'MED30', 'WHAMM', 'FAM155B', 'RAB41', 'NEFL', 'FOXD3', 'CYP4Z1', 'CHN2', 'KIAA1614', 'BBS7', 'NME2', 'RYBP', 'TMEM126B', 'GXYLT2', 'BATF', 'SNPH', 'SCN4B', 'PLCD3', 'SLC12A9', 'AXIN2', 'ZNF526', 'CYP2B7P', 'GYS1', 'RBP2', 'PTDSS2', 'PYCARD', 'LOC284661', 'HDX', 'ANXA4', 'AGPAT5', 'CSF2RB', 'SLC1A4', 'CAPN11', 'NBPF1', 'RNF31', 'ADAM12', 'SOX11', 'IPO8', 'SALL1', 'ACSBG1', 'LCE4A', 'COMMD3', 'AMTN', 'ZNF646', 'SYNE1', 'MRPS12', 'STK38L', 'NUP88', 'NXF1', 'DEF8', 'ABHD16B', 'ODAM', 'NMB', 'PYCRL', 'MFSD6', 'C14ORF1', 'MRC1', 'VSIG10', 'PIP5K1B', 'FUOM', 'LDB1', 'ABCG1', 'STAU2', 'SCAND1', 'POLD4', 'NAALAD2', 'KLK6', 'CD19', 'SLC35B4', 'ZNF814', 'STEAP1', 'LIMD1', 'ZNHIT1', 'LYAR', 'LINC00320', 'RBM48', 'CACNA1H', 'CLUH', 'NLGN1', 'MMAB', 'SNORD94', 'PATE1', 'ZNF43', 'DDX6', 'SLC35F2', 'IDH1', 'NRIP3', 'ACPT', 'NYAP1', 'CDS2', 'DEFB128', 'TMEM43', 'MEGF9', 'LRRC17', 'TDRD7', 'PARP3', 'NCOR2', 'CABP4', 'SLC22A23', 'TMEM2', 'TMSB15A', 'LOC100133669', 'HHLA1', 'BTNL3', 'SLC4A1AP', 'FAM171A1', 'MROH6', 'ZNF282', 'CCAR2', 'RBFOX2', 'COPS5', 'HELZ2', 'ADCY3', 'HADHA', 'SHB', 'PSMD9', 'NIPSNAP3A', 'PRM3', 'MCU', 'LINC00473', 'ALPI', 'GNGT1', 'MIB1', 'ELFN1', 'CDC26', 'SDCBP', 'PTPRC', 'PRDX1', 'WHSC1L1', 'ZSCAN5A', 'SNHG4', 'GPR63', 'METTL22', 'ATP6V0C', 'CTSL3P', 'ZNF644', 'DSCR4', 'TRIM37', 'USP38', 'CYP2E1', 'SYT3', 'ALKBH8', 'ANKZF1', 'UNK', 'DEDD', 'KHDRBS2', 'GALNT14', 'SCCPDH', 'ZNF738', 'CLEC3B', 'SCARNA14', 'KHSRP', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.7763023727434774 Spearman Correlation: 0.7603428812541089 Coefficient of Determination: 0.6026446572712783 RMSE: 0.28942289731445503 NRMSE: 0.07810693307851771 MAPE: 172.46502137343396 Pearson Correlation: -0.025701384918579234 Spearman Correlation: 0.06505714693345356 Coefficient of Determination: -12.874619971969262 RMSE: 1.7339957693162973 NRMSE: 0.6957802746678773 MAPE: 1453.7664258733835 Predictor: ElasticNet Pearson Correlation: 0.4161153731591662 Spearman Correlation: 0.456369315510307 Coefficient of Determination: 0.04941930122587457 RMSE: 0.4476492428906764 NRMSE: 0.12080768239674762 MAPE: 211.52489208217582 Pearson Correlation: 0.4287724333845521 Spearman Correlation: 0.4603093116642185 Coefficient of Determination: 0.04581854502567928 RMSE: 0.45472933415180267 NRMSE: 0.18246394057837484 MAPE: 243.26745770182376 Predictor: RandomForests Pearson Correlation: 0.5729350374239277 Spearman Correlation: 0.56396548068972 Coefficient of Determination: 0.30180810930936164 RMSE: 0.38364607424611397 NRMSE: 0.10353506417434602 MAPE: 237.91572688109594 Pearson Correlation: 0.39643665266463685 Spearman Correlation: 0.440211493114395 Coefficient of Determination: 0.14857723985170523 RMSE: 0.42954642908950363 NRMSE: 0.17235908974122993 MAPE: 296.9405795854865 Fold: 2 Protein: RB1 x_train_column_count: 371 x_train columns: ['PRAMEF4', 'INS-IGF2', 'DNAH17', 'RGSL1', 'FAM153B', 'B4GALT5', 'OPN4', 'HIST1H1A', 'PYGO2', 'DDX46', 'CUL3', 'AMPD2', 'ACAD9', 'HKR1', 'TMEM50B', 'PLIN5', 'CYLC2', 'KLRC2', 'MMP7', 'GPN2', 'CYB5D2', 'VPS35', 'B4GALT1', 'SNORD116-25', 'NCR3', 'LOC493754', 'STRN3', 'ENG', 'PAQR3', 'HES2', 'ZNF208', 'LINC00599', 'HYAL1', 'ITGA2', 'RASSF4', 'CD55', 'WDR86', 'FAM99A', 'GTF2IRD1', 'A1CF', 'CPSF2', 'BNIPL', 'LOC100129935', 'SSBP4', 'PPAP2B', 'GYG1', 'HRG', 'NEUROG2', 'DAPP1', 'MCTS1', 'VBP1', 'ZMYND15', 'SCARNA15', 'KLF15', 'SNORD115-25', 'LEPROT', 'ZNHIT1', 'GGTLC1', 'BTBD16', 'TAS2R10', 'RNASE2', 'CT45A2', 'KDM3A', 'OR2D2', 'TARBP1', 'MSANTD1', 'PIGG', 'ADGRG5', 'SAPCD1', 'METTL6', 'SYNGR3', 'KIAA1715', 'ANGPTL7', 'RPL15', 'FSD2', 'GNS', 'GALNT3', 'FYN', 'DUXA', 'CYP46A1', 'C16ORF92', 'GRIK1-AS1', 'NLRP4', 'PRDM1', 'CAB39L', 'TEX13A', 'SDK1', 'SAMM50', 'SLC6A8', 'RASL10B', 'RNF103', 'DAD1P1', 'CEBPZ', 'SIGLEC10', 'SSFA2', 'BNC1', 'SUCLA2', 'OR5D18', 'PBDC1', 'IL12RB1', 'C19ORF80', 'OR13G1', 'ALOX5', 'PAK6', 'IFI30', 'KLHL4', 'SOST', 'WIPI1', 'SLC18B1', 'SNORA81', 'A2ML1', 'OR2B11', 'CCDC91', 'ALDH1L2', 'ABCC9', 'RDH14', 'SNORD116-23', 'SYT12', 'OR3A1', 'TGM7', 'KCNK13', 'USP45', 'RXFP1', 'FTHL17', 'ASCL3', 'TVP23B', 'TM2D2', 'LRRC37A', 'POLL', 'MRPL50', 'ABCA12', 'SOX8', 'MXRA5', 'ZNF337', 'HNRNPA3', 'PCED1A', 'SLC6A2', 'HPYR1', 'NEFH', 'MED29', 'RAB3C', 'DNAH11', 'UHMK1', 'EFNA2', 'XKRX', 'POTEM', 'PCDHB17P', 'PAQR9', 'LOC285847', 'ZNF845', 'BRSK2', 'RPL32', 'IARS2', 'TRIML2', 'BOP1', 'ZNF221', 'PRSS3', 'TMCO4', 'HIST1H2AJ', 'LAMA5', 'INTS12', 'PKHD1L1', 'SGOL2', 'RNY4', 'ZNF609', 'CYP1B1', 'WDR90', 'EBAG9', 'FIBP', 'ZSWIM6', 'CMTM5', 'SH3PXD2A', 'ATXN10', 'BCAR3', 'MAP3K10', 'KIAA0556', 'ARSH', 'CKLF', 'OR9A2', 'ATP13A5', 'HBA2', 'C17ORF89', 'AKAP14', 'TMED6', 'SPCS2', 'FAH', 'KRT14', 'FBXO16', 'PSMB6', 'CCL4L1', 'KRT222', 'PER1', 'FOXA1', 'SORCS1', 'DAZ4', 'OR4F17', 'MUC13', 'MRPS18B', 'PCNXL3', 'CLDN18', 'GPR37', 'CCL19', 'RFPL3S', 'LRRC3', 'FOXE1', 'DHCR7', 'UGT2B28', 'PLOD3', 'TAS2R7', 'RP1', 'RTN4RL2', 'ANPEP', 'KLHDC4', 'CAPRIN1', 'TIFA', 'SCARNA9L', 'VTI1A', 'FAM157B', 'MYO1C', 'RABL2B', 'ERICH3', 'DDX27', 'NKIRAS1', 'PHKB', 'CECR5', 'TWISTNB', 'DNM1L', 'XRCC6BP1', 'LRRC57', 'PPP1R36', 'CYBRD1', 'SSX2IP', 'HIST1H2BH', 'RBBP8NL', 'CCDC50', 'CABIN1', 'NUP133', 'UFSP2', 'RASA2', 'MAL', 'COL23A1', 'NOL4', 'TMEM235', 'GPR143', 'CCDC69', 'PHLDA2', 'MIER1', 'GFOD2', 'CDC20B', 'NDUFB6', 'THBS2', 'USP43', 'ANKRD28', 'PNPT1', 'CT45A5', 'SAV1', 'GP5', 'SPTSSB', 'TBCE', 'TAF1C', 'CACNB2', 'FAM169B', 'CYP1B1-AS1', 'ZNF584', 'C4ORF33', 'NEK1', 'SNRPD2', 'RPL8', 'DUSP9', 'PMS2P5', 'HPD', 'PIK3CG', 'SLC28A2', 'SYPL2', 'HMMR', 'TRIT1', 'GEMIN7', 'OR6A2', 'ADTRP', 'B4GALT2', 'MFSD4', 'REC114', 'SLC25A12', 'DMWD', 'C18ORF8', 'ANKAR', 'WASH2P', 'RANBP10', 'BEND3', 'TTC29', 'CXORF40B', 'SYNGR1', 'HSPA5', 'PTPN5', 'TMEM176B', 'EVI5', 'ZNF385D', 'VWCE', 'KAT2B', 'PLK1', 'ZNF34', 'VPS33B', 'MAL2', 'ODF4', 'UBXN1', 'C16ORF52', 'ATAD3C', 'FGF20', 'ARHGAP44', 'GCC2', 'DNAJC6', 'KCNIP4', 'SPP1', 'TXLNB', 'DDX28', 'CYP21A2', 'ASF1B', 'EXOC3L4', 'ZW10', 'CLSTN2', 'INF2', 'ZMAT5', 'LYZL4', 'OR4B1', 'CALCA', 'ZNF79', 'ADCY9', 'SLC5A7', 'INO80C', 'SLC5A6', 'XKR8', 'ZNF570', 'TBC1D14', 'DOCK2', 'HAVCR2', 'PLCB3', 'NUDT16L1', 'SLCO2B1', 'HIST1H4J', 'UBA2', 'HK2', 'MLH1', 'MAATS1', 'DUSP16', 'CACNA1S', 'ARHGEF9', 'IRF2', 'MYO1D', 'BPIFA4P', 'EPHB3', 'HIST1H4K', 'LRRC3B', 'NHLH2', 'TGOLN2', 'ISG15', 'C1RL-AS1', 'XKR4', 'SAA3P', 'HDHD1', 'NBN', 'MAPRE1', 'LPGAT1', 'AMER2', 'ATP8A1', 'FLJ25758', 'GRXCR1', 'IPO5', 'ZNF502', 'NCL', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.8506073338946587 Spearman Correlation: 0.7835507050736225 Coefficient of Determination: 0.7235328363771822 RMSE: 0.12358497084547064 NRMSE: 0.04519637611376194 MAPE: 426.5496296286314 Pearson Correlation: -0.015175040847173998 Spearman Correlation: -0.00876987610964784 Coefficient of Determination: -2.895333373960946 RMSE: 0.483357275783609 NRMSE: 0.2769289201359037 MAPE: 1488.6977182206583 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: RandomForests Pearson Correlation: 0.6081886337641774 Spearman Correlation: 0.49685199143529185 Coefficient of Determination: 0.20691121089984676 RMSE: 0.20931713723641976 NRMSE: 0.07654956745041683 MAPE: 145.01320038936413 Pearson Correlation: 0.00014585190221932161 Spearman Correlation: 0.11241342308067506 Coefficient of Determination: -0.05136179961557774 RMSE: 0.2511146446913771 NRMSE: 0.1438706126269764 MAPE: 246.8083245370908 Protein: CDH1 x_train_column_count: 836 x_train columns: ['TM9SF1', 'PPP1R3E', 'SNX4', 'ARHGAP5-AS1', 'LEMD2', 'PROCR', 'BRAF', 'PTGER3', 'ZFY', 'SNORD38A', 'CYP1B1', 'FMN1', 'IGLL1', 'ATP1B1', 'VILL', 'E2F5', 'GLOD5', 'HGSNAT', 'LYRM1', 'VWF', 'EIF2B2', 'SOX17', 'RPUSD4', 'GBF1', 'FCHSD2', 'HIST1H3D', 'C3ORF79', 'E2F6', 'CYBB', 'BRINP2', 'DLK2', 'C20ORF195', 'TAT', 'SRSF5', 'TRIP11', 'TAGLN2', 'CYP2B7P', 'RAP1B', 'ADGRG5', 'COLQ', 'C9ORF78', 'OR2A25', 'MEFV', 'ARX', 'MYLK', 'CLCA3P', 'ATF7IP', 'CSGALNACT2', 'C16ORF54', 'GALE', 'ABHD12B', 'CCNT1', 'TMEM50A', 'CCDC74B', 'ASTN1', 'LINS', 'CAP1', 'CCL20', 'MYO1D', 'C7ORF73', 'TAP2', 'PEBP1', 'SV2C', 'GEN1', 'ADA', 'NCF1', 'ASIC4', 'AIFM2', 'DGCR11', 'TAF6', 'MRPL28', 'NPTX2', 'PRR23C', 'C17ORF82', 'BPIFB6', 'SULT2B1', 'C17ORF97', 'FAM155A', 'GIPC1', 'LINC01098', 'VWA5B1', 'ZNF446', 'ZNF280B', 'LGALS9C', 'FGF16', 'SPTLC3', 'PHF12', 'USH2A', 'ARMC1', 'SLC26A3', 'C2ORF48', 'ZFYVE16', 'SUMO1P1', 'RAB2B', 'SIGLECL1', 'LINC00602', 'COL27A1', 'ANPEP', 'DGKQ', 'AQP3', 'GP1BA', 'SNORD116-23', 'CCDC54', 'EPHA4', 'PARD6G', 'SLC16A14', 'CYB5B', 'DOC2B', 'TCEAL3', 'GSPT1', 'OR51G2', 'FAM98C', 'ANKS4B', 'RGS10', 'GPR141', 'ASB16-AS1', 'TMEM163', 'PCNA', 'PRSS48', 'SNHG12', 'GABRB2', 'PMS2CL', 'BZRAP1', 'SI', 'LPCAT2', 'PRRC1', 'HECW2', 'RHBDD1', 'TYROBP', 'PRKAR1B', 'ZNF462', 'TP73', 'TXNL4B', 'GPER1', 'TIMD4', 'NEUROD2', 'CEP162', 'SNORD68', 'OSBPL10', 'PRDX3', 'BTLA', 'GRK6', 'GHRLOS', 'CD209', 'HGH1', 'RNPS1', 'LCN12', 'NBEAL2', 'ZNF594', 'SPACA1', 'IL2RB', 'RBP7', 'ZNF571', 'WASH7P', 'PTPN11', 'HAR1A', 'THUMPD3-AS1', 'SEMA4C', 'CCDC121', 'LBP', 'CNFN', 'PPP3CC', 'CRSP8P', 'SKIV2L', 'GNE', 'ANAPC4', 'TBX15', 'TOMM40L', 'PSORS1C1', 'SPATA2', 'CPEB2', 'THAP10', 'OR6C70', 'CALB2', 'LOC399815', 'EXOSC8', 'CNTNAP3', 'KLC4', 'IDH3B', 'SNTB1', 'RBMY1A3P', 'PPP2R3B', 'TMEM248', 'PTGR1', 'KRT37', 'LDOC1', 'BIRC3', 'SCFD1', 'LRWD1', 'NIPA2', 'NXNL2', 'SSBP1', 'WDR91', 'TNNI3K', 'KCNJ8', 'TRANK1', 'ARHGEF26', 'AGPAT9', 'ALDH16A1', 'ZCCHC10', 'NUP54', 'TMEM200C', 'SELK', 'SNORA52', 'GLRX3', 'SENP3', 'NDUFB9', 'PIAS1', 'PPAT', 'ZNF280A', 'SBSN', 'EPG5', 'MTERF4', 'RNF165', 'CST13P', 'SCRN2', 'TSPAN18', 'TBCK', 'KRTAP17-1', 'OR8I2', 'SGCZ', 'POLR1C', 'ENAH', 'LOC100132287', 'SNORD45B', 'DHX57', 'LOC100129935', 'ATP6V1G1', 'SLC44A5', 'RPS26', 'FAM179B', 'AGMAT', 'ZNF350', 'INSL5', 'GYS1', 'PPP2R5E', 'SUSD6', 'OR4C13', 'FAM102B', 'CEL', 'NUP85', 'KIAA1919', 'KIAA0020', 'IL21', 'ZNF207', 'COL11A1', 'ZNF638', 'MEIS2', 'ABCB5', 'C12ORF57', 'FOXL2NB', 'PURA', 'TAS2R46', 'VGF', 'TMEM55A', 'CRLF1', 'NUTM2A-AS1', 'LY86', 'COL6A4P1', 'LIN52', 'EPHB3', 'DHRS4-AS1', 'CHD1', 'DHH', 'ENO3', 'SAMM50', 'GAD2', 'SRP54', 'ZBTB1', 'IQSEC3', 'RPS6KA6', 'OIP5-AS1', 'BCO1', 'CAPN5', 'DUSP21', 'MRPL3', 'DPH7', 'DTHD1', 'PCDH17', 'DNAH5', 'PRIMPOL', 'ACAA2', 'RASSF2', 'CUL5', 'PCGEM1', 'TTTY11', 'BAZ2B', 'NCLN', 'ARHGEF18', 'DENND1B', 'AGT', 'ALDOA', 'GGT8P', 'KCMF1', 'CXXC5', 'SLC10A5', 'USP34', 'MARCH4', 'MAB21L3', 'STEAP1B', 'MTMR6', 'NEK2', 'SSTR4', 'NCBP1', 'ZBTB34', 'LRAT', 'DAW1', 'ZNF160', 'DLX6-AS1', 'PKIA', 'PAX6', 'PHGR1', 'ARHGAP11A', 'ATG7', 'LRRC37BP1', 'LEAP2', 'C9ORF142', 'ZNF415', 'RPRM', 'PAQR4', 'WDR93', 'ZNF280C', 'STEAP2', 'EPS15', 'SH3BP2', 'IFI6', 'PKLR', 'CDH19', 'SNORA65', 'KRT73', 'STAT6', 'KDM5A', 'SLC32A1', 'THAP5', 'MXRA7', 'FAM86JP', 'ALDH9A1', 'TGS1', 'FAM74A1', 'ZNF530', 'SPATA8', 'NPLOC4', 'GPR87', 'CHN1', 'TIMM8B', 'DOK5', 'BBS7', 'EIF6', 'TTL', 'SLC36A4', 'PRF1', 'ABRA', 'UBXN2A', 'EIF1AX', 'EIF2B4', 'MRPL1', 'GTF2H1', 'ABCG5', 'IGF2BP2', 'SEPT9', 'CSDE1', 'RFPL4B', 'AQP12B', 'MED25', 'AQP2', 'USP38', 'SDHAF3', 'ADD1', 'KIF26B', 'ATAT1', 'STAT3', 'ASB11', 'SEC23B', 'HERC1', 'IFNA13', 'HTN1', 'ZNF680', 'CYTIP', 'PIGO', 'BCL10', 'LDB1', 'MXRA8', 'METTL7A', 'GRM7', 'TCF19', 'PTGFR', 'ARSB', 'RAB15', 'ROS1', 'OIP5', 'ALPPL2', 'MAGI2', 'JMJD1C', 'FCHO2', 'SLC25A42', 'SERINC4', 'DICER1-AS1', 'BCL9L', 'COPS5', 'KRT80', 'CAV3', 'GGT3P', 'FHDC1', 'SH2D7', 'BCORP1', 'PDLIM5', 'ARSG', 'H1FX', 'DYTN', 'ZFP30', 'LOC100130331', 'NOL4', 'ATP5G1', 'LTBP2', 'CLDN7', 'ZNF587', 'ASB6', 'MAVS', 'DDT', 'COL1A2', 'HHIPL2', 'WFDC2', 'ZBBX', 'SCN1A', 'NIPAL4', 'SEPT2', 'RFT1', 'PFN4', 'OR52K2', 'RAB3A', 'H2AFX', 'LINC01128', 'COMMD5', 'EML4', 'MAGEA6', 'C2ORF50', 'COX19', 'EXOC5', 'TRIM13', 'CAPNS2', 'CNTN6', 'SNAP23', 'TCTA', 'HRASLS', 'UNC93A', 'REEP5', 'TDRD1', 'SNORD121A', 'HES5', 'MAP3K13', 'GNPDA1', 'VDAC3', 'FBXO6', 'TRAF4', 'RASSF8', 'TRIM66', 'C7ORF69', 'AOX1', 'GATS', 'THRSP', 'ARNT', 'AKAP3', 'CCNA2', 'SLC2A11', 'GSKIP', 'GSTM2P1', 'AMBRA1', 'SNORD123', 'FARP2', 'PTK6', 'SNX6', 'SVIL', 'TPD52', 'SH2D1A', 'MATN1', 'PLD5', 'SPAG11A', 'PTPN9', 'LDAH', 'MFN1', 'ADCK2', 'SNORD49A', 'MEOX2', 'TMEM167B', 'EVA1A', 'GPR52', 'SNORD1A', 'TTTY17B', 'CX3CL1', 'DOCK10', 'MTA3', 'SDF2', 'EMB', 'SFT2D3', 'SESN1', 'SMYD1', 'CLCN4', 'LRP12', 'WFDC11', 'SOX5', 'SLC25A14', 'ARHGAP1', 'SPATA25', 'ZNF781', 'STC2', 'PXDN', 'KIAA0226L', 'SYN3', 'TBCE', 'LILRA5', 'ABCA2', 'RNF19A', 'RSPH3', 'AATBC', 'ARID2', 'TPM1', 'ABHD2', 'C10ORF105', 'SNORD115-17', 'TRIP12', 'GSS', 'LOC344967', 'ZNF527', 'SLC26A11', 'KIF3C', 'HEG1', 'CLTCL1', 'RASGRF1', 'CLU', 'CCDC38', 'SLC26A4', 'CKM', 'THNSL1', 'XYLT2', 'CD3E', 'IKZF5', 'PCSK6', 'IGFBP2', 'ACOT1', 'SPPL3', 'SNX25', 'UNC13D', 'GSTO1', 'MRPS22', 'TBC1D3P2', 'KANSL2', 'ARRDC4', 'C16ORF46', 'KANSL1', 'APBA2', 'DIO3', 'GSTT1', 'LOC284578', 'ARHGAP35', 'PLN', 'CNOT3', 'DPY19L2P2', 'C1QTNF8', 'PHAX', 'NPAP1', 'CRELD2', 'KDM4A', 'SCN1B', 'ZNF770', 'WNT8A', 'AEN', 'HTT', 'KLHL33', 'SNAP29', 'MTCH2', 'AMDHD2', 'LMO3', 'AHCYL2', 'REXO1L6P', 'TTC21B', 'SNORA71C', 'XBP1', 'ATP6V1C1', 'RAB35', 'TMEM2', 'KLHL25', 'GPR3', 'SDF4', 'FCMR', 'FERD3L', 'KRTAP4-11', 'TMEM263', 'SETMAR', 'MRC2', 'ABLIM3', 'EDEM1', 'GPR160', 'TRNT1', 'HRASLS2', 'EMCN', 'NR1I2', 'PLIN3', 'TCEA2', 'KRT74', 'C10ORF32', 'NEIL3', 'TRAPPC11', 'DENND6A', 'ZNF830', 'C18ORF8', 'TRAPPC3', 'TSHZ3', 'GTPBP4', 'DCAF12', 'ZNF697', 'C1QTNF9B-AS1', 'KLHL40', 'HLA-J', 'NIPAL2', 'CYP26B1', 'SNORD45A', 'CTDSPL2', 'PRR19', 'PSMD5', 'AMER1', 'CCDC168', 'PNRC1', 'C2ORF54', 'CALHM1', 'CATSPERG', 'KCNMB3', 'FAM73A', 'SNORD79', 'PHOSPHO1', 'NXPH3', 'IFT27', 'SMCO1', 'VNN1', 'FBN3', 'GNA12', 'GNPTAB', 'RAVER2', 'TFCP2', 'HMP19', 'TMEM261', 'RNASE6', 'KCNN2', 'REST', 'GTSE1', 'SAYSD1', 'CCDC66', 'UBE2C', 'C8ORF82', 'POLR3GL', 'C6ORF1', 'TARS', 'CDHR5', 'FCRL2', 'EED', 'MAN2C1', 'ISX', 'SCD5', 'AGFG1', 'TRPT1', 'ULK1', 'TLE4', 'RRP1', 'LANCL3', 'SCARNA20', 'UBE2DNL', 'TNFRSF10D', 'TMEM201', 'ZC3H12C', 'GNPAT', 'LINC01551', 'CSN3', 'ZNF675', 'EMBP1', 'OR6C6', 'CD24', 'COL11A2', 'TMEM177', 'CAD', 'GNAS-AS1', 'A2M-AS1', 'ACTN1', 'TRIM10', 'C1R', 'MTHFR', 'LOC100128288', 'ILDR2', 'OMG', 'GLP2R', 'TSEN54', 'VPS36', 'RPSAP9', 'UNC5D', 'MED12', 'ABCC10', 'AWAT2', 'SNORD113-7', 'CBX2', 'LOC647859', 'SPEF1', 'LINC00298', 'OR51F1', 'SLC25A1', 'RPL31P11', 'XPO6', 'NANS', 'TBC1D2B', 'APMAP', 'LYSMD3', 'ZNF804B', 'ANGPTL5', 'UBE2V2', 'ABCA9', 'SLC7A2', 'FBRSL1', 'PRPF3', 'DCDC2', 'TIMM21', 'LRRK1', 'PLCD3', 'GNAI3', 'TEX10', 'PRMT6', 'ERMP1', 'SERPINA7', 'E2F7', 'TSR2', 'POR', 'DIRC1', 'POU6F2', 'GCNT1', 'ELL3', 'SYTL5', 'MBOAT2', 'MCPH1', 'PHLPP1', 'SNCG', 'MMP7', 'ARFGAP3', 'CALCOCO1', 'SORBS1', 'SDHD', 'PEA15', 'G3BP2', 'MLH1', 'RBMY1A1', 'C10ORF107', 'METTL7B', 'FDX1L', 'DHODH', 'HIRIP3', 'RBMXL3', 'SCNN1G', 'MGAM2', 'SEC14L3', 'HHIPL1', 'HOXB13', 'FASTKD5', 'C17ORF105', 'CLTC', 'HEPHL1', 'CSN1S1', 'KRT81', 'TSPAN17', 'JAM2', 'ANKRD34C', 'C9ORF116', 'RASSF4', 'FER', 'RAB6C', 'CLEC1A', 'NT5C3A', 'CEP131', 'RFPL1S', 'RTP4', 'TBC1D3H', 'NEDD9', 'MYO9B', 'FAM46A', 'CSRP1', 'ACER1', 'PIFO', 'FGD3', 'TTTY9B', 'BACE1', 'COQ3', 'PZP', 'CCL27', 'MBTPS2', 'CEP350', 'SAP30L', 'PIGA', 'LOC340017', 'CTRB2', 'RPS6KA2', 'CHRNA9', 'RXFP2', 'BCL3', 'TRADD', 'OR4K17', 'UBALD1', 'HYPM', 'MAP3K4', 'LINC00879', 'DNAH7', 'ATG5', 'SNORD18B', 'CYP2B6', 'SFTPA2', 'PQBP1', 'GPR156', 'MED14', 'UPF3B', 'ATG101', 'ZNF628', 'SUSD5', 'PLEKHG7', 'C7ORF31', 'DCST1', 'SERPINB1', 'CHAC1', 'SLC6A1', 'PDIA6', 'SELV', 'CD19', 'RBM41', 'TAF8', 'CYB5D2', 'TUSC5', 'RFESD', 'ATP13A2', 'HOXB1', 'ECHDC1', 'CADM4', 'INTS8', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 4.339526402147567e-15 NRMSE: 6.961620922671961e-16 MAPE: 4.382156847493696e-12 Pearson Correlation: 0.3861981382057209 Spearman Correlation: 0.35731635937957273 Coefficient of Determination: -1.6731958041345658 RMSE: 1.8812533014835626 NRMSE: 0.3340886701267204 MAPE: 859.09526864772 Predictor: ElasticNet Pearson Correlation: 0.6703168575877264 Spearman Correlation: 0.6191511343202989 Coefficient of Determination: 0.33766992966725484 RMSE: 0.9119831635420546 NRMSE: 0.14630354753221378 MAPE: 364.2440989328511 Pearson Correlation: 0.6562417318833197 Spearman Correlation: 0.7024582967515365 Coefficient of Determination: 0.3155642957029813 RMSE: 0.9519151047461749 NRMSE: 0.16904903298635676 MAPE: 157.00577411788632 Predictor: RandomForests Pearson Correlation: 0.7797140142963653 Spearman Correlation: 0.6689483531155636 Coefficient of Determination: 0.6039846682199814 RMSE: 0.7051890893980006 NRMSE: 0.11312891463832528 MAPE: 229.79442461409732 Pearson Correlation: 0.6590685923922166 Spearman Correlation: 0.7025514221293946 Coefficient of Determination: 0.39593828564916456 RMSE: 0.8942779964354648 NRMSE: 0.15881335401091543 MAPE: 252.2832798517613 Protein: CDH2 x_train_column_count: 474 x_train columns: ['ZDHHC18', 'KIR2DL3', 'NQO2', 'GRK7', 'DNAH10', 'ATP6V1C2', 'ZBTB6', 'BAIAP2L1', 'ADCK3', 'SNORD114-16', 'UNC79', 'METTL12', 'FGL2', 'MUTYH', 'CMTR2', 'KPNA7', 'PNPLA6', 'RBM7', 'ERMARD', 'ASCC3', 'WNT16', 'MOGAT1', 'GCM1', 'PLA2G4F', 'ZPR1', 'FAM177B', 'LRIT3', 'SLC25A19', 'TLL1', 'SYT17', 'C4ORF32', 'RPL27', 'TTTY21', 'ACSM4', 'MGAT5', 'MRPL27', 'BTN1A1', 'KLK10', 'HAVCR1P1', 'EIF4E2', 'TSTD1', 'LOC646813', 'FILIP1L', 'SNHG10', 'DSCAM', 'LINC00928', 'RAET1E', 'PPAT', 'ZPBP', 'HAPLN2', 'CUX1', 'CIB2', 'NINJ1', 'H3F3AP5', 'UNKL', 'BAZ2B', 'NAB1', 'SSTR5-AS1', 'PRSS58', 'GPR85', 'RABGGTA', 'FJX1', 'TMED7-TICAM2', 'GBA3', 'LMBRD2', 'C5ORF63', 'KGFLP1', 'AKAP6', 'NXF2B', 'RORB', 'KIF3B', 'DACH2', 'RCC2', 'MMP12', 'LINC01341', 'CXCL13', 'AUNIP', 'ORMDL2', 'PRSS41', 'PLAG1', 'TEX15', 'MLIP', 'TLR9', 'ZFP69B', 'AMZ2P1', 'COCH', 'ZNF624', 'LYZL4', 'CRABP2', 'TMX3', 'PGAM1', 'SNORA15', 'C19ORF48', 'PRNT', 'CHCHD6', 'LINGO2', 'FLVCR2', 'AVPI1', 'STRA13', 'SELM', 'RPAP2', 'CLYBL', 'CHCHD10', 'PCDHA7', 'RPL14', 'MOCS1', 'ZNF619', 'FLJ13224', 'UBE2L3', 'FKBP3', 'KIAA2022', 'IRGC', 'CHRFAM7A', 'SEPT10', 'LRR1', 'TRIM3', 'CSTF3', 'SSTR2', 'SNCG', 'C20ORF195', 'FAM169A', 'SSX2IP', 'MICAL3', 'MRPS31', 'STAC3', 'DNAJC15', 'C11ORF84', 'CDC42SE2', 'NKIRAS2', 'PTPRVP', 'RBM12B', 'CMPK2', 'ABCC5', 'NVL', 'CACNB2', 'TACSTD2', 'NLRP8', 'HIST2H2AC', 'DNAJB6', 'INHBA-AS1', 'SNORD119', 'ZNF382', 'MS4A13', 'C1ORF116', 'MIB2', 'OPN5', 'LOC148709', 'TAX1BP1', 'LAMTOR1', 'ZNF564', 'CD300LG', 'GNB1L', 'PPDPF', 'OR2J2', 'LDLRAD2', 'S1PR5', 'PCDH7', 'NKTR', 'CTHRC1', 'PRSS33', 'RAB8B', 'LRRC57', 'FBXL22', 'RBP3', 'HHLA3', 'PDIA5', 'ECT2L', 'ARNTL', 'SNORD116-1', 'ITSN1', 'USP16', 'C9ORF171', 'EPM2AIP1', 'SMARCE1', 'BCL2L1', 'CDKN2D', 'APOC2', 'LINC00620', 'TUBB6', 'BPIFA1', 'MAD2L2', 'RPS23', 'OPHN1', 'NTM', 'SAP30L', 'MIS18A', 'MAPT-AS1', 'CPT1A', 'SLC26A2', 'ELF4', 'INSL5', 'PRKRIR', 'GSTZ1', 'CDC37', 'LYPLA1', 'UBE2D4', 'FAM71A', 'MRPL20', 'TPX2', 'C17ORF85', 'LINC00189', 'TCEAL1', 'SNORA70', 'C1QBP', 'MIR155HG', 'FAM84A', 'TEAD1', 'C6ORF163', 'MYOM2', 'ITGB3', 'CERCAM', 'TAF4B', 'TRA2A', 'RAB43', 'RNF17', 'GFRA1', 'EPC1', 'LINC00652', 'AQP8', 'RTCB', 'MYH7', 'ZNF784', 'DCANP1', 'RPS27L', 'TICRR', 'EHBP1L1', 'FAM228A', 'POMP', 'ELMSAN1', 'MTCL1', 'ARHGEF16', 'OR51G1', 'GOLGA6L6', 'ITGA3', 'RPL23AP53', 'PSME3', 'CMTM5', 'FAM179B', 'DRAIC', 'BDP1', 'LOC728554', 'ZNF565', 'USH1C', 'C5ORF28', 'DHCR7', 'TRIM50', 'HDX', 'FAM126A', 'RAD9B', 'GINS4', 'PCYT1A', 'RRAGA', 'PRDX5', 'RBM24', 'PCDHGA5', 'TNFSF4', 'GPD1L', 'GOLGA3', 'DLX3', 'SOSTDC1', 'FCN2', 'HSPB11', 'SPRY2', 'MBD5', 'TTTY1B', 'OR6C75', 'SMTNL1', 'PGPEP1L', 'SOD2', 'COL24A1', 'SNX24', 'MORF4L2', 'IL17RC', 'TNFRSF4', 'TAS2R13', 'IRF4', 'DKK2', 'SLC10A6', 'PITPNA', 'S100G', 'WDR72', 'ATP7B', 'HNRNPUL1', 'ADARB2', 'CAMKMT', 'SNORD29', 'HIF1A', 'CCDC113', 'POLD1', 'HSBP1', 'BPY2', 'BTNL9', 'OR4N4', 'FAM178B', 'PHLPP1', 'TAAR8', 'GID8', 'CDH11', 'PXT1', 'TM4SF1', 'CTNNA2', 'ANXA2R', 'PLAC1', 'TCP10L2', 'IL24', 'LINC01599', 'CGA', 'FOXN2', 'MESTIT1', 'SRD5A3', 'NCL', 'PITX3', 'CTAG2', 'PAX2', 'BCRP3', 'FAM201A', 'CAAP1', 'SNRPD3', 'ADAD1', 'SCAND2P', 'LIN52', 'CACFD1', 'FAM120B', 'LOH12CR1', 'C1ORF189', 'RBBP9', 'CYB561A3', 'TOB2P1', 'DNAJC10', 'SLC45A2', 'P4HB', 'OTUD5', 'LINC01558', 'PPRC1', 'PRG2', 'SNORD35A', 'LOC400043', 'MIPEP', 'GNB1', 'TULP2', 'TIMM9', 'FAM222A', 'DAPK3', 'PRR23C', 'DTNA', 'ARL10', 'CDHR1', 'SMC6', 'NLGN2', 'COA7', 'DNAI1', 'KCTD2', 'RNF169', 'RAD18', 'PURB', 'ADAR', 'IL17C', 'TSPEAR-AS2', 'PNPLA8', 'ADPRM', 'WFDC8', 'CD27-AS1', 'CMIP', 'ESCO2', 'TMEM141', 'CLCF1', 'CA5B', 'SNORD111B', 'STRADA', 'DPP4', 'COQ5', 'SLC22A9', 'SPOCK2', 'DYNLT3', 'ELMOD3', 'DCP2', 'UBE4A', 'ING2', 'PTGDS', 'SLC6A1', 'ERCC6L', 'OR6C2', 'FAM196A', 'PTPRU', 'HMGN3', 'LRRC47', 'RPL6', 'MAD2L1BP', 'GSR', 'KIF22', 'LINC00113', 'DKKL1', 'TRMT5', 'PPP3R2', 'RNF168', 'GLDC', 'TACR3', 'SRFBP1', 'SPATA2', 'ATG4B', 'DDX28', 'EFNB3', 'RBM28', 'XAGE5', 'SPATA20', 'TMEM241', 'ZNF735', 'C15ORF61', 'PSG11', 'FAM110B', 'RAD51D', 'LINC00298', 'SNORA8', 'CERS4', 'NPIPB5', 'KRT36', 'JADE2', 'PPP3CB', 'JRK', 'CDNF', 'SAP30', 'CCK', 'PDIK1L', 'MPP7', 'OR4L1', 'PAG1', 'SLC7A6OS', 'FMNL1', 'SAP30BP', 'STARD5', 'PNPLA7', 'PNLDC1', 'CYP2S1', 'LOC113230', 'DBR1', 'ZNF562', 'TMF1', 'HMGN2P46', 'HIST2H2BA', 'CIDEB', 'FAM58BP', 'LOC284441', 'CCDC150', 'SNAPC1', 'P2RY13', 'PALM2-AKAP2', 'TSSC2', 'KIAA1324L', 'TM9SF2', 'CHRNA3', 'AES', 'ZMYM4', 'COL19A1', 'NECAB1', 'LEPR', 'TCP11L2', 'LRRTM1', 'C10ORF131', 'HEPHL1', 'RTP5', 'CEACAM22P', 'LCN15', 'SPATA41', 'EFEMP1', 'GOLGA7', 'MCTS2P', 'S100A7L2', 'BASP1', 'FABP3', 'FOXD1', 'MTG1', 'SOBP', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.9361322340050814 Spearman Correlation: 0.9062091093646449 Coefficient of Determination: 0.8761599704902472 RMSE: 0.12953714436452793 NRMSE: 0.04693714920085801 MAPE: 438.6703158417156 Pearson Correlation: -0.06287265467896212 Spearman Correlation: -0.012350014632718759 Coefficient of Determination: -4.114175566063454e+25 RMSE: 2482804741312.2993 NRMSE: 1307999147237.7603 MAPE: 68802179544287.35 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: RandomForests Pearson Correlation: 0.5638996109262415 Spearman Correlation: 0.4992510926932866 Coefficient of Determination: 0.1838971645272519 RMSE: 0.332534139648615 NRMSE: 0.12049211524335642 MAPE: 760.5596013968187 Pearson Correlation: 0.10841704779685117 Spearman Correlation: 0.14414203492342212 Coefficient of Determination: 0.011330346706823313 RMSE: 0.38488125296750375 NRMSE: 0.20276437461739663 MAPE: 188.22021940241945 Protein: CDH3 x_train_column_count: 75 x_train columns: ['DEK', 'NCSTN', 'PTGFRN', 'ARID5A', 'C11ORF54', 'ERP44', 'C10ORF95', 'NCK1', 'COL4A4', 'FIG4', 'PGBD2', 'ZBTB9', 'MYL9', 'OR4N5', 'SMPDL3A', 'MPP3', 'NRG4', 'ARHGEF10L', 'KRT24', 'ABCA11P', 'EVPL', 'KRTAP19-7', 'ZNF443', 'PRIMPOL', 'CHERP', 'TNFRSF11B', 'SH2D5', 'OR8G2', 'FGF21', 'TMEM155', 'FUT9', 'CTSS', 'ABCF1', 'SESN2', 'EEF2K', 'JAK3', 'LOC728323', 'TMEM194B', 'MYH9', 'ATP6V1C2', 'ITGA4', 'LOC646813', 'ZC3H11A', 'DCTN2', 'DIAPH3', 'HPN-AS1', 'DYTN', 'GLTSCR1L', 'OR5B17', 'ISLR2', 'IQCF3', 'MMGT1', 'KRTAP5-7', 'FRMPD1', 'EMP2', 'CELSR3', 'TCTEX1D1', 'NCAPH2', 'MTX1', 'COQ9', 'KLF2', 'GPR27', 'DDX11L2', 'PRRT4', 'FRA10AC1', 'LINC00202-1', 'CCR2', 'ADRA1D', 'CRHR1', 'MTMR8', 'CHRNB1', 'FBLN7', 'OR2T33', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.6086415577847937 Spearman Correlation: 0.5842095382858692 Coefficient of Determination: 0.3704445458544797 RMSE: 0.164803911447143 NRMSE: 0.1240311511346496 MAPE: 309.4084693476281 Pearson Correlation: 0.244643482651475 Spearman Correlation: 0.26466198419666376 Coefficient of Determination: -0.41040262465418254 RMSE: 0.2350594327670845 NRMSE: 0.19341679648406526 MAPE: 2348.346200527559 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: RandomForests Pearson Correlation: 0.5391373247481023 Spearman Correlation: 0.5630670155330569 Coefficient of Determination: 0.2664700887771513 RMSE: 0.17789323526809755 NRMSE: 0.1338821545897944 MAPE: 323.1243629384628 Pearson Correlation: 0.13695844076873312 Spearman Correlation: 0.3214885395189927 Coefficient of Determination: -0.20156367357335303 RMSE: 0.21695992649899296 NRMSE: 0.17852376079897392 MAPE: 1761.9785405525854 Protein: PTEN x_train_column_count: 886 x_train columns: ['MYCT1', 'CACNG6', 'ERCC1', 'UNC13D', 'LOC91450', 'WBSCR27', 'AADAC', 'EGFL8', 'ACBD4', 'LGALS12', 'EHF', 'ZNF155', 'KCNK16', 'CARD9', 'ATP5SL', 'PCDH20', 'OR51D1', 'KDELR2', 'LIPF', 'PIWIL4', 'ZRANB3', 'BAHD1', 'GRIK1', 'RINL', 'JADE3', 'IER2', 'SNORD116-3', 'FZD5', 'GNG7', 'TCEANC', 'KRTAP23-1', 'OR4C46', 'CLDN11', 'TMEM63C', 'PLK4', 'RAB34', 'TSG1', 'MPP5', 'NOX3', 'TNIP1', 'VCPIP1', 'RALBP1', 'IMP3', 'SYNDIG1', 'PRCC', 'PDHB', 'KPNA6', 'GOLGA7', 'SLC25A3P1', 'SUN5', 'R3HDML', 'HK2', 'PHF6', 'PIP4K2A', 'CROCCP2', 'SLC6A9', 'LINC00032', 'XPO6', 'FAM161B', 'HSBP1', 'ZNF676', 'SENP8', 'POLR3B', 'RFNG', 'GALNT13', 'MSX2P1', 'DMBT1', 'FAM98C', 'ADGRG3', 'CYP21A2', 'RP2', 'UNC5CL', 'YIPF5', 'SCGB1B2P', 'PADI1', 'TCAIM', 'RLN1', 'PGAP2', 'DGKD', 'SMAD6', 'CHIC1', 'TCEAL3', 'ST6GALNAC5', 'ISM1', 'PTBP3', 'PCDHGA2', 'CORO6', 'IER5', 'CENPP', 'KRT32', 'ZNF791', 'FER1L5', 'SMCR5', 'RPS2P32', 'GID8', 'ZDHHC13', 'GTPBP1', 'AARD', 'PCDHA4', 'SPRR2C', 'ZNF581', 'TMEM263', 'SPPL2A', 'SNAR-H', 'CARNS1', 'ARMT1', 'CAB39L', 'FAM179B', 'WNK1', 'XRCC4', 'PRR35', 'SH2D1B', 'LMOD3', 'REXO2', 'MRPL3', 'SIRT7', 'TTLL11', 'PRMT5', 'SLC8A3', 'XKR6', 'BCL2', 'PAX1', 'MMP1', 'GPIHBP1', 'DACT1', 'SYNRG', 'FOXM1', 'G6PC2', 'IQGAP3', 'GDPD5', 'DDC', 'MYO15A', 'MIA2', 'TMEM136', 'MPDZ', 'SLC6A1', 'COG3', 'LINC01591', 'ADGRF5', 'NKG7', 'ERGIC2', 'COX11', 'COX7B', 'SNORD114-20', 'PTGS2', 'SCCPDH', 'ST8SIA2', 'FAM162B', 'SMIM15', 'HS3ST1', 'ZBED2', 'TMEM59L', 'PRKCE', 'TMEM219', 'LOC645166', 'PDE3B', 'JAKMIP3', 'MIB1', 'RAB11FIP2', 'LAT2', 'DPH3', 'ZNF835', 'GPR19', 'SNX29', 'ZNF883', 'ESCO2', 'MRPS23', 'FFAR2', 'EEF2', 'ZDHHC17', 'SLCO6A1', 'IDH3A', 'GNB1', 'SEC63', 'ARFGAP1', 'VN1R4', 'WARS', 'SRSF8', 'CTSO', 'SLC32A1', 'SQRDL', 'TAF9', 'LINC00667', 'STARD3NL', 'CTDSP2', 'RPUSD4', 'TUBG2', 'LOC728392', 'ACPP', 'CACNG1', 'PSMA8', 'CDK5RAP3', 'GBA2', 'VPS51', 'XG', 'KLHL24', 'WDR60', 'SKAP1', 'DOCK2', 'MIR17HG', 'TMEM179', 'SNORD116-23', 'TBC1D3H', 'C9ORF64', 'C9ORF153', 'MAZ', 'NEU2', 'NT5C1A', 'FAM69B', 'ARMCX5', 'IL2', 'ZNF774', 'PDZD7', 'MS4A8', 'CEP290', 'ATXN7L3', 'IFI44L', 'MUL1', 'CCSER2', 'RUVBL1', 'CDH24', 'ZCCHC13', 'CRLF2', 'RHOBTB2', 'SLCO4A1', 'CSPG4', 'DYNC1LI1', 'TTTY17A', 'CPPED1', 'PRDX3', 'MORC1', 'TMCC3', 'GPR89A', 'C20ORF85', 'KDM3A', 'EXPH5', 'DNM3', 'MED1', 'TMEM156', 'KRT72', 'GSTZ1', 'HSFY1P1', 'C17ORF98', 'PEX11A', 'HLX', 'CIB1', 'LOC613037', 'TTC33', 'SPATA33', 'ZNF184', 'ARL14', 'LINC00298', 'EFHC2', 'PCDHB19P', 'OR10A4', 'POU4F1', 'FAM35A', 'DDX17', 'SLC25A20', 'AKNAD1', 'PPP1R1A', 'NELL2', 'VPS35', 'FBXO44', 'COX4I2', 'RPAIN', 'SLIRP', 'DNAJC1', 'STRADA', 'KCNQ3', 'BBC3', 'TFIP11', 'CLNS1A', 'ZNF514', 'MATR3', 'NHS', 'LINC00893', 'B4GALT7', 'PNISR', 'RBP3', 'MMAA', 'POC1B', 'HABP2', 'MGAM2', 'PVRL3', 'TFAMP1', 'SPNS2', 'DUSP4', 'PTDSS2', 'C1ORF95', 'SNF8', 'MOCS3', 'POLR2J', 'CCNB2', 'COA3', 'GIMAP4', 'SPAG4', 'BAK1', 'PAPOLG', 'TRAPPC2', 'GPR132', 'RCN3', 'ERLIN2', 'IQCJ', 'ISOC2', 'FDXR', 'RNF213', 'DCAF4L2', 'SMG1P3', 'MYBL2', 'WNK3', 'MB21D1', 'TRIM74', 'PLAA', 'PRL', 'FOXI1', 'GJB1', 'PIK3CD', 'TBCEL', 'C10ORF10', 'GALNT8', 'TTC31', 'RDH8', 'MEF2C', 'BAG3', 'SYT13', 'TMPRSS11D', 'MARCKSL1', 'C9ORF116', 'TCHH', 'MRPL21', 'TRAPPC1', 'ABCC10', 'MAGEA3', 'SNORD102', 'SPOP', 'BAG4', 'ZNF131', 'CARS', 'SPATA32', 'LINC01465', 'PCDH10', 'MEIS3P1', 'PTCD3', 'SCAND1', 'LOC202181', 'TCIRG1', 'ADRBK2', 'RSPRY1', 'PIK3R5', 'MGAT1', 'C3ORF79', 'TSC2', 'IZUMO4', 'OR2T2', 'SYCE1', 'ZNF772', 'TP63', 'NOC4L', 'GLRA4', 'SFRP4', 'F13B', 'GSTA5', 'NLN', 'IQUB', 'WARS2', 'OR4E2', 'IMP4', 'SNAR-A2', 'STXBP1', 'NUDT4', 'LURAP1', 'MDH2', 'FIBP', 'CCNT1', 'FGFBP2', 'APPBP2', 'NDNL2', 'FASTKD1', 'RAB4B', 'ZNF816', 'PITX3', 'CHRNB1', 'MYLK', 'SESN3', 'PIP5K1B', 'ASH2L', 'PLOD1', 'ARHGEF25', 'PCBD1', 'VTN', 'SEC13', 'TRIM53AP', 'GKN2', 'NPW', 'YEATS4', 'PPM1E', 'SULT1A1', 'DUX4L6', 'OSR2', 'INPP5E', 'CCDC13', 'FAM3C', 'CHRNA10', 'ECEL1', 'TMEM14E', 'TYRP1', 'CRP', 'SUOX', 'CHID1', 'TNC', 'NINL', 'RHBDD2', 'ARL6IP5', 'CATSPERB', 'C16ORF71', 'RBFA', 'MMADHC', 'CCDC102A', 'MMGT1', 'MYT1', 'REC114', 'TTTY17B', 'SLC25A51', 'WDR27', 'DNAJB14', 'GAS2L1P2', 'SNORA53', 'TMIGD1', 'EXOSC8', 'SSR1', 'TMEM126B', 'ILKAP', 'CDHR5', 'ISCA2', 'TLR1', 'RAB24', 'OR6W1P', 'YARS2', 'XRCC2', 'KRT10', 'CARD11', 'PSMA4', 'DNAJC5G', 'C11ORF86', 'MFSD12', 'KDF1', 'TIMM22', 'TMPRSS9', 'TBL2', 'MNX1', 'CDC34', 'NUDCD2', 'OR10K1', 'QSOX2', 'RASSF7', 'AADACP1', 'GPC5', 'NUDT5', 'GMPR', 'CCDC153', 'ASIC5', 'EPB41L4A-AS2', 'ACER2', 'GCG', 'MAGEB3', 'MIR100HG', 'PKIA', 'TMEM92', 'GOT2', 'AFAP1', 'UBASH3B', 'LAMA1', 'PRR15L', 'JMY', 'FAM65A', 'TMEM170A', 'ZNF70', 'RPF2', 'ATP5L', 'DUSP7', 'TMPRSS6', 'OR2T3', 'SLC4A4', 'ST13', 'TPPP3', 'ZNF718', 'C8ORF74', 'B3GALNT1', 'OSTF1', 'ABI1', 'ACOX3', 'CEP44', 'GPD1', 'ZNF517', 'CGRRF1', 'ATP1A1', 'DUSP5P1', 'SNORD67', 'TCF4', 'CT47A9', 'RUNX1', 'FAM171A2', 'HIST1H2AB', 'TMEM79', 'ROCK1', 'GTDC1', 'CD248', 'CENPO', 'NPR1', 'VPS72', 'DYNAP', 'COA7', 'TNFAIP2', 'ZBTB47', 'IKZF1', 'MRAS', 'FANCL', 'MRGPRF', 'TMX1', 'POMK', 'SNORD115-39', 'PRTG', 'OTOR', 'SEPHS1P1', 'KRT73', 'CSDE1', 'UBN1', 'TSPY2', 'EVI2B', 'ERAS', 'PMS2P5', 'SNORD82', 'RFXAP', 'BSN', 'ATXN1L', 'DDIT3', 'MUS81', 'GTF2H1', 'BNIP2', 'BTN1A1', 'COG6', 'LOXL1', 'LINC00696', 'C1ORF204', 'ATP1A1-AS1', 'ATHL1', 'LYRM4', 'ECE1', 'TUBB4B', 'PTTG1IP', 'LIN52', 'NUTM2A-AS1', 'ZWINT', 'AUNIP', 'SPRED1', 'METRNL', 'GPD1L', 'BMS1P20', 'GYS2', 'GSTA2', 'ZSWIM2', 'YBEY', 'SLAMF7', 'GDA', 'TRIAP1', 'TOMM22', 'MYH10', 'CWC25', 'SNORD113-9', 'ANAPC1', 'IL23A', 'MORN5', 'GAGE2D', 'OR4F21', 'TUBA1C', 'FAM133CP', 'CST1', 'ADCY10', 'AZIN2', 'OR6B3', 'RAB5B', 'OPALIN', 'HTR2A', 'DCTN5', 'C1QTNF4', 'HAMP', 'FIGNL1', 'WDR36', 'SLC2A10', 'FRMPD1', 'NHLRC1', 'IQCC', 'ATXN2L', 'SC5D', 'LANCL1', 'CELA2A', 'RPA4', 'LBH', 'CAPRIN1', 'UGT2B10', 'LDB1', 'EPHA7', 'ZMYM5', 'HNF1B', 'ISLR', 'ENTHD2', 'DPP7', 'C1ORF140', 'GTF3C2', 'TP73-AS1', 'FADD', 'ACSM3', 'OR2AE1', 'NT5DC2', 'TNFAIP3', 'DCLK1', 'SLX1B', 'TMEM161A', 'GALNT11', 'PSG7', 'ADAMTS19', 'MAK16', 'KLHDC1', 'FGF12', 'TREML3P', 'ACOT7', 'SPAG11A', 'TDRD3', 'ZNF398', 'KRTAP4-4', 'SP5', 'ZNF286A', 'SLC26A1', 'OR1S2', 'TAAR6', 'LILRA2', 'REM1', 'CDR2L', 'SERTM1', 'C11ORF49', 'TMEM223', 'FER', 'SNORD46', 'TCTA', 'NIPSNAP3A', 'PPIL1', 'HLA-DQB1', 'CD320', 'C14ORF37', 'CDKAL1', 'SHKBP1', 'LBHD1', 'DNM1L', 'LRRC74A', 'FAM110C', 'ALG9', 'SUGP2', 'CFAP52', 'INO80B', 'CHKB', 'SFT2D2', 'TEX2', 'DEFB113', 'ST6GALNAC1', 'BTBD1', 'FRY', 'OR52B6', 'EXOSC5', 'MSTN', 'ULBP2', 'PAF1', 'ANKRD30BL', 'HSP90AB1', 'PSG5', 'C14ORF177', 'MCPH1', 'COX7A2', 'C5ORF24', 'RPN2', 'THSD1', 'ZSCAN4', 'TUBA3E', 'NTRK1', 'KLHL12', 'RNF168', 'LECT2', 'DDX10', 'HTR1A', 'LOC100128573', 'ENPP5', 'TM9SF3', 'TAC4', 'CANX', 'PKIG', 'SRP68', 'CCBL1', 'VIM', 'C8ORF76', 'GBA3', 'TMEM39A', 'TMEM150C', 'INTS4', 'PADI3', 'TIMM17A', 'EEF1E1', 'BMP5', 'ACOT2', 'UBXN1', 'COASY', 'GAGE12F', 'CCT4', 'ACTG2', 'PPP3CB', 'KIAA1045', 'CLDN23', 'DLGAP2', 'LOC644936', 'ASB1', 'SH3BGRL3', 'SNORA70B', 'SLC22A5', 'C21ORF58', 'ZBTB1', 'PXYLP1', 'CDK8', 'MAGEA2', 'USPL1', 'CENPC', 'HIST1H2BF', 'ATP5O', 'RAX', 'CFAP44', 'PWAR5', 'TAF7', 'ANKRD31', 'SEMG2', 'ADAM15', 'LMNTD2', 'HIST1H3C', 'RNF41', 'ARL6IP4', 'HOXA5', 'CLEC16A', 'KIF18A', 'HBD', 'SAP30BP', 'FAM103A1', 'MRPL36', 'FAM8A1', 'ZNF236', 'NUDT7', 'CTXN2', 'PRAMEF10', 'PTK2B', 'CRYM-AS1', 'ATP11A', 'SNORD33', 'SLC25A24', 'STAM2', 'ZRANB2', 'SEBOX', 'HDHD2', 'COL7A1', 'TMED10', 'ZG16B', 'CELF1', 'PRSS38', 'GSAP', 'DDX26B', 'KRT8P41', 'LAP3', 'PTMA', 'BGN', 'APLNR', 'FOXH1', 'CLK1', 'INPP5F', 'NCS1', 'ZNF704', 'SETDB2', 'BHLHE40', 'SUPT4H1', 'C8A', 'SPDYA', 'WDR44', 'PMP22', 'GAS2L1', 'RAB8A', 'MTERF4', 'BTN3A3', 'ACSS3', 'BCRP3', 'PRELP', 'STUB1', 'C1ORF52', 'FAM26D', 'SLC9A7', 'SMAD1', 'CLEC3A', 'PFN1P2', 'KATNBL1', 'C9ORF91', 'GPR82', 'RASL11B', 'NUDT19', 'TMEM86B', 'CHD2', 'CYP2A6', 'WDR49', 'UBAC1', 'PSMB5', 'PAEP', 'MARCH11', 'MDK', 'CLEC1B', 'PRKCH', 'HYKK', 'PRDX5', 'TSC22D3', 'TMEM53', 'ZMYND8', 'INPP5B', 'ZNF512', 'NRSN1', 'ME2', 'PLP1', 'SKOR1', 'C4ORF32', 'TTC39C', 'SCARNA8', 'PCDHGA12', 'WFDC8', 'SF3B5', 'CDK12', 'MCM7', 'STAP2', 'PSMA5', 'ADPGK', 'BEST1', 'NUCB2', 'CUX2', 'POGK', 'GLT8D2', 'PHLDB1', 'LRRN4CL', 'SPAM1', 'SUSD1', 'TCTN2', 'C20ORF203', 'SPAG8', 'PTGFRN', 'NFS1', 'ALOXE3', 'LOC400043', 'GRAMD2', 'SYN1', 'HGC6.3', 'OR4C45', 'ZNF582', 'CHAC1', 'FAM169B', 'SNORD115-16', 'ARFGEF3', 'NAPA', 'THNSL1', 'L3MBTL3', 'PDRG1', 'FANCD2OS', 'ANKRD34A', 'RAET1G', 'PLAG1', 'RARB', 'FAM46C', 'KLF4', 'HSD17B1', 'ADIRF', 'KRTAP19-5', 'PDSS1', 'GLYCTK', 'ZNF771', 'RPL27A', 'NOP14-AS1', 'CHST2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 4.194281967390661e-15 NRMSE: 6.558176792104856e-16 MAPE: 8.47643627820607e-12 Pearson Correlation: 0.016065361710051553 Spearman Correlation: 0.042347088088966936 Coefficient of Determination: -3.8696448033768736 RMSE: 1.1290281870752474 NRMSE: 0.378665208973453 MAPE: 3153.659610608849 Predictor: ElasticNet Pearson Correlation: 0.4203494487243473 Spearman Correlation: 0.4316151584086999 Coefficient of Determination: 0.06911197637629873 RMSE: 0.6018094685768953 NRMSE: 0.0940988927491041 MAPE: 291.9894509029854 Pearson Correlation: 0.31696220171353284 Spearman Correlation: 0.30869183494293245 Coefficient of Determination: 0.05859444543540582 RMSE: 0.49641457087929675 NRMSE: 0.16649267872259751 MAPE: 457.25627830171413 Predictor: RandomForests Pearson Correlation: 0.6111849732880306 Spearman Correlation: 0.537549603867192 Coefficient of Determination: 0.3190026233973715 RMSE: 0.5147341879085734 NRMSE: 0.08048380703753785 MAPE: 232.94729866940335 Pearson Correlation: 0.23237910053275315 Spearman Correlation: 0.2782012558349119 Coefficient of Determination: 0.017948163803994888 RMSE: 0.5070179655736051 NRMSE: 0.17004895545130305 MAPE: 484.13476760623536 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['CDCA7', 'PTGR2', 'CNNM1', 'GLRA3', 'KRTAP10-11', 'DIRC2', 'GPR17', 'OR4D6', 'FARSB', 'CEACAM6', 'SEPSECS', 'ANKRD36', 'NELL2', 'BAP1', 'COL6A4P1', 'OR6S1', 'HNRNPCL3', 'CELA3A', 'DEFB131', 'TRAPPC9', 'SULT4A1', 'SRBD1', 'GPR158-AS1', 'YY1AP1', 'UGT1A10', 'YPEL2', 'MAP4', 'LOR', 'NAB2', 'RAF1', 'ANKFN1', 'TBC1D3', 'PELO', 'ARHGEF18', 'KRTAP5-4', 'TMLHE', 'GRAMD1A', 'PIN1P1', 'MAD2L1', 'MARK2', 'MCUR1', 'PPBPP2', 'IRF7', 'PHAX', 'SLC8A2', 'ASH1L', 'MARCH1', 'SUV420H1', 'ZNF519', 'EHD1', 'CCDC124', 'BSPH1', 'ITGAV', 'SLC6A17', 'RRM1', 'ZNF134', 'MXRA8', 'NME8', 'HCG18', 'DDX21', 'DAB2', 'SCUBE2', 'CALCOCO2', 'C16ORF71', 'KIR3DL2', 'PPWD1', 'GNAT3', 'SLC25A32', 'FATE1', 'WNT11', 'MANSC1', 'CRHR2', 'NDUFS5', 'BCAS1', 'HSD17B4', 'SAFB2', 'CCDC91', 'PUM1', 'BRINP1', 'IFNLR1', 'CD8A', 'C12ORF76', 'DNHD1', 'KATNBL1', 'ZFYVE27', 'ZNF512', 'IL5RA', 'C3ORF14', 'ALPI', 'WNT5B', 'TAPBPL', 'SULT1A3', 'KIF26B', 'GK2', 'ZSCAN12', 'CYP2F1', 'STX10', 'ARPC1B', 'DGCR5', 'HERC1', 'GNA15', 'S100A1', 'HMGA2', 'GSS', 'ATF7IP2', 'SFXN2', 'SRSF7', 'SKIL', 'ZDHHC2', 'LMF2', 'OACYLP', 'NUPR1', 'MRPS2', 'DNAI2', 'NSMCE4A', 'CTSH', 'ADCY5', 'ABCB6', 'BACE1', 'C2ORF69', 'PEAK1', 'WNT4', 'ASB13', 'FASTKD5', 'ABCC10', 'ZNRF2', 'CISD1', 'SPRYD4', 'PRKAR2A', 'LDLRAP1', 'LAMTOR4', 'ITGA3', 'MIR4697HG', 'LRRC57', 'TMED7', 'NOTUM', 'TMEM102', 'FTHL17', 'PDZK1IP1', 'ADAP2', 'ST7-AS2', 'NXPE2', 'ANP32AP1', 'MTDH', 'HSPB1P1', 'NMUR1', 'ZNF678', 'TVP23C', 'METTL15', 'CREBBP', 'ACTRT1', 'YLPM1', 'IL23R', 'C14ORF28', 'DAPK2', 'BTC', 'FSCN1', 'LPPR5', 'FAM53A', 'CYLD', 'EIF2D', 'MAP1LC3C', 'ERLEC1', 'KIF1BP', 'KIF21B', 'MRPS11', 'DLEC1', 'GSTK1', 'LRRC75A-AS1', 'TACO1', 'RLTPR', 'MAGI2', 'RHEBL1', 'ITGB5', 'C8ORF74', 'ITPRIPL2', 'NOL4', 'MYO1H', 'AFAP1L1', 'UBR5', 'IDI2', 'FBXO4', 'AASDH', 'AADACP1', 'C1ORF146', 'MARCH11', 'LINC00240', 'MFAP4', 'FGD5', 'MMAB', 'GPR62', 'ITPRIP', 'BRS3', 'NELL1', 'PNPLA5', 'ZNF267', 'FAM192A', 'C9ORF171', 'HSPBAP1', 'TSN', 'TBC1D16', 'PCDHA10', 'LETM1', 'DPYS', 'XKR3', 'TTC21A', 'KRT33A', 'PLVAP', 'MYO9A', 'BAGE2', 'SNORD116-8', 'RBBP7', 'NTSR1', 'OR51M1', 'TCHP', 'IFNAR2', 'UBE2Q2P2', 'HIST2H3C', 'RPRD2', 'TBL1X', 'TAS2R3', 'ZNF792', 'HIST1H2AK', 'GNB5', 'SNORD116-11', 'PACSIN2', 'YWHAEP7', 'LINC00523', 'ANP32E', 'LL22NC03-63E9.3', 'SOD2', 'TOR1AIP2', 'LSM5', 'ZNF704', 'ATOH7', 'ZNF45', 'MST1R', 'NNAT', 'RNF34', 'SNORD35B', 'SNORD2', 'VPRBP', 'DDA1', 'PSORS1C2', 'CX3CL1', 'THUMPD3-AS1', 'OCM', 'SUPV3L1', 'IFNA5', 'CLPTM1', 'C3ORF35', 'LINC00654', 'PRDX2', 'ZNF836', 'GSTCD', 'SLC37A1', 'CEP250', 'HTR3E', 'CELA1', 'CCT2', 'DCT', 'FAM157A', 'UGT3A1', 'L2HGDH', 'SLC36A1', 'ACBD6', 'DNAJB5', 'KIAA1324L', 'PDE6G', 'DHODH', 'UPK1B', 'APOBEC4', 'MRPS14', 'CBR3', 'LOC256880', 'TMEM155', 'ATAD5', 'MTX2', 'RBM33', 'CTNNBIP1', 'POLR3F', 'SUSD3', 'PAGE5', 'CEP83-AS1', 'RHBDD3', 'PCSK2', 'ZDHHC12', 'FOXE1', 'PSMA4', 'LCOR', 'ZMYND11', 'CCDC37', 'GNAL', 'ERP29', 'OBFC1', 'NCAPG', 'SNORD114-29', 'TPH2', 'CAPN9', 'MEGF6', 'UNC5CL', 'CLPX', 'CXORF36', 'SLC6A11', 'GCA', 'CYTH2', 'ZNF540', 'SNHG7', 'HOOK2', 'GFER', 'RNF151', 'PGPEP1', 'CATSPERB', 'FAT1', 'CHRNA4', 'FBLL1', 'SRMS', 'POMT2', 'CARD16', 'DSN1', 'POU2F1', 'C12ORF45', 'SLC35D1', 'USP3', 'EIF5AL1', 'GINS1', 'POU6F1', 'ATP6V1G2', 'OSGIN1', 'KLHL34', 'COQ4', 'COBL', 'EEF1E1', 'SERPINB1', 'SOHLH2', 'EIF3D', 'ETFB', 'TM4SF4', 'ATP6V1C1', 'CSF2', 'TIPARP', 'PLAG1', 'SLX1B', 'MBLAC2', 'C11ORF74', 'KLK14', 'CYP2D7', 'GRHL1', 'SLC13A3', 'EPX', 'S100A7L2', 'MAGT1', 'ARHGAP21', 'RECQL', 'BNIP3', 'ZNF223', 'SNX12', 'FKRP', 'TCEANC', 'ZC4H2', 'ALG1L2', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.8396843768932033 Spearman Correlation: 0.8070780063988717 Coefficient of Determination: 0.7050698522617196 RMSE: 0.10607574068630686 NRMSE: 0.06833676320586689 MAPE: 335.92578126572454 Pearson Correlation: 0.18346788115936538 Spearman Correlation: 0.23132377329041073 Coefficient of Determination: -2.1196267537884683 RMSE: 0.3412171986375966 NRMSE: 0.23096884151651736 MAPE: 585.8165755609278 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: RandomForests Pearson Correlation: 0.5890242607631974 Spearman Correlation: 0.5249011834429131 Coefficient of Determination: 0.1873058994047192 RMSE: 0.17608405963848184 NRMSE: 0.11343795112802825 MAPE: 158.35112961642392 Pearson Correlation: 0.2557361326118538 Spearman Correlation: 0.27556823724514684 Coefficient of Determination: 0.04550921453423329 RMSE: 0.18874065814146565 NRMSE: 0.12775795397200737 MAPE: 116.41297992864081 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['MMP12', 'ZHX3', 'CHP2', 'IRS1', 'FAM195A', 'UBXN2A', 'IL7R', 'ACOX2', 'PLAU', 'LRRC36', 'RBM22', 'IPO5', 'AGO2', 'KRT13', 'POLR3A', 'SGCD', 'MRPL17', 'SENP3', 'ZNF676', 'PRPS1L1', 'WDR49', 'SMC2', 'IQUB', 'CD1D', 'RPP38', 'SNORD115-4', 'SLC4A3', 'ECE2', 'APOA2', 'DDA1', 'CARD17', 'TMEM132C', 'PAGE5', 'TMEM201', 'MROH8', 'ZNF337', 'DST', 'TXNDC5', 'FGF2', 'FBXO48', 'WDR93', 'CAPZB', 'C11ORF95', 'ZNF503-AS2', 'CD40LG', 'MCM5', 'ASH2L', 'AFAP1-AS1', 'PEX11B', 'SCN3B', 'SH3BP1', 'LY86', 'RNF115', 'ZDHHC5', 'ARHGEF25', 'SYT16', 'STYXL1', 'OLFML3', 'KLHDC7A', 'NKX1-2', 'CHST7', 'NDUFS5', 'GTF2F1', 'HSFX2', 'ZFHX4', 'RAMP3', 'UBE2Z', 'USP32', 'RBCK1', 'PPP1R14C', 'PRAMEF4', 'LOC341056', 'KRTAP5-5', 'WSCD1', 'KRTAP6-3', 'NUP50', 'C2ORF78', 'CCDC74B', 'FAM215A', 'EBF1', 'CASC3', 'COL26A1', 'OR10W1', 'FAM41C', 'THNSL1', 'NUP107', 'REC114', 'GXYLT1', 'PRICKLE2', 'PIP4K2B', 'VSTM2B', 'DLEU2L', 'ASAH1', 'CEBPG', 'UQCRC1', 'TAF15', 'TMEM80', 'NPM1', 'ADTRP', 'BOLA3', 'CSMD1', 'TUBA4A', 'UPF2', 'KRTAP21-1', 'FMNL2', 'SNX21', 'TMEM87B', 'NANOS3', 'ASB6', 'HMGCS1', 'SAC3D1', 'C7ORF25', 'UIMC1', 'MFSD9', 'SPAG17', 'PPAP2B', 'PFKFB3', 'SNORD32B', 'SNORD111', 'FMO3', 'EDEM3', 'LRSAM1', 'PASD1', 'ACTRT2', 'IAH1', 'PRR18', 'ADAMTS16', 'CXCL11', 'ZNF620', 'GATA4', 'RIN1', 'OR51F2', 'CENPV', 'IPO7', 'NDUFB10', 'EFHD2', 'ZNF205', 'PATL1', 'EN1', 'PRR26', 'ZFHX3', 'FAM69C', 'KRTAP21-2', 'AGL', 'C19ORF48', 'ELMSAN1', 'PPP2R4', 'TNR', 'C8ORF48', 'HMP19', 'FAM9B', 'KRTAP10-7', 'DDX12P', 'CHST4', 'FAM162B', 'C1QTNF1', 'RNF135', 'GOLGA7', 'ZNF33A', 'GLMN', 'OR3A1', 'ODF2', 'FCGR1C', 'TMEM71', 'CPSF7', 'SCGB1C1', 'CA9', 'ITGA11', 'MLEC', 'BRD2', 'CREG1', 'ESAM', 'KCNMB2', 'S100G', 'CDCA8', 'MOB1A', 'SAMD12', 'LOC344967', 'VPS28', 'SPINT1', 'IFNA2', 'LRRTM3', 'MSRB1', 'OAZ3', 'SLC17A2', 'NANOS1', 'PRAMEF14', 'OTUD7A', 'TMEM44', 'ASCC1', 'RFX2', 'BRDTP1', 'STK33', 'KIAA0408', 'SPANXN1', 'SNHG9', 'RPL31P11', 'CWC27', 'AGO1', 'EFCAB12', 'RRAGC', 'PSG2', 'NKX2-4', 'ASAH2B', 'SRA1', 'CCDC53', 'GTPBP10', 'ATP5H', 'SNORD114-10', 'APH1B', 'CD48', 'TUFM', 'SNORD59B', 'SP100', 'SLC39A2', 'CD27-AS1', 'SLC37A3', 'CEACAM21', 'TMEM99', 'CEBPB', 'PCDHB17P', 'AQP7P1', 'DSEL', 'C14ORF1', 'RPS2P32', 'MROH6', 'GAPDHS', 'MYH9', 'GMPR', 'SIDT1', 'PLEKHF1', 'ZGLP1', 'FAM213A', 'ST6GAL1', 'NFKB2', 'ITPRIPL2', 'SNORD115-5', 'OR52E8', 'HNRNPUL2', 'PCNT', 'DEFB135', 'FAM71E1', 'TAF1', 'GMCL1', 'ASL', 'SERP1', 'TIGD2', 'MAGEC1', 'DEFB132', 'DCUN1D2', 'ARAF', 'OPN1SW', 'RANBP3', 'PDE1C', 'CCDC144B', 'PDS5A', 'PAM', 'PALLD', 'SRF', 'FANCM', 'CILP', 'CCDC59', 'EDRF1', 'CSN1S1', 'SLC1A3', 'WNT1', 'GJA5', 'HERC5', 'FCHO1', 'MTMR7', 'GOLGA8B', 'NXPE1', 'AMELX', 'CHIC1', 'LRRC4C', 'BHLHA15', 'LINC00634', 'DCAF13', 'HSPA13', 'PRRC2B', 'UBTD2', 'SYNGR1', 'VPS53', 'DPH2', 'KIAA1324L', 'PQLC3', 'SNORA53', 'FXYD5', 'TMEM175', 'TCTN2', 'RILP', 'SNX13', 'FAM206A', 'SRFBP1', 'WFIKKN1', 'SLC6A12', 'GNRH2', 'PLG', 'KRT35', 'RPS4Y1', 'TENM3', 'PGC', 'SNORA26', 'SERPINB12', 'MUC1', 'CCDC25', 'CALHM1', 'AASDH', 'DNAH6', 'ZP4', 'VGLL2', 'FGL2', 'SH3GL1', 'GLRX', 'ZNF221', 'SNORD115-37', 'NKD2', 'TULP4', 'OR4Q3', 'CRYGC', 'MME', 'PMS2P4', 'C9ORF85', 'OR2S2', 'TTTY13', 'CACNB2', 'SBF1', 'QTRT1', 'CD109', 'GABPA', 'CFHR3', 'SNORD90', 'QRICH1', 'TMEM180', 'SLC43A2', 'WHAMMP3', 'GATS', 'FAM134C', 'IL27RA', 'OR51V1', 'UBE3C', 'DARS', 'SCG2', 'ZNF20', 'RADIL', 'TMEM139', 'CDC20', 'PPIEL', 'SPIDR', 'DUSP3', 'RASSF1', 'TMEM260', 'COL9A3', 'SUMF1', 'REN', 'MOB3B', 'TBK1', 'MORN2', 'ARFIP2', 'OR51L1', 'CLDN17', 'ZC3H10', 'TCF15', 'USP39', 'SLC2A10', 'HSPA9', 'NMS', 'CADM2', 'CDR2', 'TMEM206', 'BCAS2', 'MYO3B', 'OR1B1', 'HIST1H1B', 'STAM2', 'ZNF320', 'WDYHV1', 'MEIOB', 'TMEM160', 'TANGO6', 'SERGEF', 'EPB41L4A-AS2', 'SLC45A4', 'ENTPD8', 'PP14571', 'CRLS1', 'EPS15', 'PABPC1L2A', 'SFRP2', 'TLR1', 'MIR1-1HG', 'TRAPPC8', 'MFI2', 'LMNA', 'PBX2', 'NXPE2', 'SUCNR1', 'PMS2P1', 'SPATA13', 'SETD6', 'FCGR3A', 'KCNN3', 'USP12', 'KRT36', 'OR2J2', 'RNF207', 'HIST1H3A', 'SEC61B', 'KLRAP1', 'MAPK11', 'LRRC24', 'RPGRIP1L', 'COL4A4', 'FRZB', 'INTU', 'TNNC2', 'LSM3', 'SMPD3', 'PDE7A', 'CRTAP', 'UTP3', 'NBPF7', 'SPECC1L', 'PROSER3', 'CASC10', 'DYX1C1', 'WIBG', 'ARL14', 'EIF2B2', 'ATXN7L2', 'PRDX5', 'MRM1', 'HSPA5', 'PDLIM2', 'SRR', 'RNF24', 'CIZ1', 'TRIML1', 'SCARNA8', 'DPF1', 'SF1', 'HERC1', 'MYEF2', 'GNL3L', 'SLC4A10', 'SNORD117', 'CSTB', 'JUND', 'FAM71D', 'C8ORF74', 'PM20D1', 'CCER1', 'RCN1', 'SIGLEC7', 'HAVCR1', 'PUS10', 'ERAP1', 'PCGF6', 'NKAIN1', 'HGD', 'PCBD2', 'KYNU', 'PPP1R18', 'MYF6', 'MBOAT7', 'PID1', 'NUTM1', 'PRMT2', 'ZNF137P', 'DNAJC1', 'BBS12', 'MYO15B', 'FLI1', 'ATP5E', 'CCDC90B', 'MAPK8IP2', 'SNORA79', 'GFM2', 'LINC00893', 'FAU', 'RHOU', 'CPLX3', 'PSMB4', 'SCG3', 'YIPF1', 'CLK2P1', 'COX20', 'GLI2', 'MS4A4A', 'HAS1', 'SCG5', 'ZMYM2', 'VDAC2', 'ZNF222', 'IL17RB', 'NUCB2', 'GOLGA8EP', 'INO80E', 'GRAMD1A', 'EPB41L4A-AS1', 'SULT6B1', 'SGK3', 'FTLP10', 'DHX33', 'SNORD113-7', 'TTC30B', 'CUX2', 'SYCE1L', 'RGS8', 'MAGEF1', 'ZUFSP', 'RPL39', 'KDSR', 'SLC4A5', 'PRKCG', 'C2ORF83', 'FGFR4', 'HES6', 'PIGZ', 'NASP', 'TRIM49', 'CCDC63', 'IFIH1', 'EIF5', 'TMEM254', 'PLA2G2E', 'LINC00598', 'SLC22A16', 'EPM2AIP1', 'SPARC', 'SNORD115-26', 'LAMB2P1', 'HAVCR2', 'CYSTM1', 'PHB2', 'RHBDD3', 'TTF2', 'MAP3K11', 'ZEB2', 'OR9G4', 'SLC36A2', 'IGFN1', 'DNPH1', 'LRIG1', 'THAP11', 'AEN', 'HIF1A', 'TRA2A', 'MYO1G', 'ZIC4', 'EXOSC8', 'ZSCAN20', 'ATG4B', 'OR52I1', 'RAB9B', 'CEP164', 'C12ORF71', 'ACTR1B', 'SLC20A1', 'NUGGC', 'MUC20', 'SNORD119', 'SNORD116-25', 'HTR1D', 'ELOVL2', 'SORBS1', 'RUSC2', 'TMEM116', 'LILRA4', 'RHOJ', 'TARM1', 'RASD2', 'BOD1', 'TOMM40L', 'CXCR2', 'HELQ', 'CXORF36', 'WEE1', 'SNORA4', 'TMEM25', 'PSMD1', 'DNMBP', 'PCDH7', 'SUSD1', 'TYR', 'B3GALNT2', 'HEPHL1', 'GCNT2', 'LOXL4', 'SH3BP5', 'TTTY20', 'FARP2', 'UBL4B', 'HECW2', 'MPPE1', 'HHATL', 'FES', 'LMAN1', 'TOM1L2', 'GAPT', 'STAG3L3', 'BNIPL', 'GDI1', 'NWD1', 'INHBE', 'DRG2', 'WDR63', 'MIA3', 'MON1B', 'CDH23', 'CD1C', 'KCNAB1', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 4.5915183660885535e-15 NRMSE: 1.0379831278599645e-15 MAPE: 4.052164324499649e-12 Pearson Correlation: -0.003978484480641903 Spearman Correlation: -0.01170617500731636 Coefficient of Determination: -12.002620069954553 RMSE: 2.4283394021282994 NRMSE: 0.6560242603545222 MAPE: 1428.7291474673784 Predictor: ElasticNet Pearson Correlation: 0.49562982598635474 Spearman Correlation: 0.3391324617179104 Coefficient of Determination: 0.1326632423973254 RMSE: 0.6177792801528454 NRMSE: 0.13965847861486275 MAPE: 240.60460599516418 Pearson Correlation: 0.5034383707473542 Spearman Correlation: 0.4042727538776706 Coefficient of Determination: 0.12600752098488122 RMSE: 0.6295754695067205 NRMSE: 0.17008198333334787 MAPE: 173.4683034304492 Predictor: RandomForests Pearson Correlation: 0.6630671315741985 Spearman Correlation: 0.6132233243965728 Coefficient of Determination: 0.4242743862153645 RMSE: 0.5033235348209141 NRMSE: 0.11378400244623353 MAPE: 170.41304670271617 Pearson Correlation: 0.6848281373356484 Spearman Correlation: 0.551473027021754 Coefficient of Determination: 0.4291037710140648 RMSE: 0.5088297991949396 NRMSE: 0.1374621242692186 MAPE: 122.52976923919165 Protein: TP53 x_train_column_count: 1002 x_train columns: ['MARVELD2', 'OR56B1', 'OR2A7', 'OR1L1', 'MMEL1', 'ABCD3', 'SNX2', 'GRXCR1', 'GABRA6', 'TDRP', 'TRAF2', 'MOV10', 'LOC654342', 'ACAP1', 'IARS', 'AFP', 'FBLIM1', 'LCE2A', 'PRKG1', 'PAIP2B', 'C8B', 'SGK494', 'MRPL19', 'TMTC1', 'MC4R', 'RQCD1', 'PREX2', 'FGF12', 'FRMD6', 'EIF2S2', 'LINC01139', 'DNM2', 'IL13', 'RUVBL1', 'WDR74', 'GLE1', 'HMOX2', 'ANP32E', 'CYLC2', 'RNY4', 'DDX41', 'LRTM2', 'CSAG3', 'STRN3', 'C1ORF146', 'TMEM182', 'SLC40A1', 'TGDS', 'AURKB', 'KLHDC8A', 'TARBP2', 'MLLT4-AS1', 'SLU7', 'SYNGAP1', 'KISS1', 'ITGB2', 'C21ORF2', 'ATP9A', 'CYP26C1', 'TYK2', 'ZNF286B', 'ITFG3', 'TBX3', 'TMEM217', 'CGB', 'CNNM3', 'PTPRT', 'ARGFXP2', 'AGAP7P', 'RPL39', 'SLC27A3', 'LAMP1', 'EFCAB13', 'MXRA7', 'SAP30L', 'C7ORF31', 'SPANXC', 'C20ORF85', 'PDGFRL', 'OR2J3', 'FITM1', 'MBD3L1', 'KLHL22', 'JAK2', 'LRP5L', 'DUSP9', 'PAH', 'NPR3', 'SFMBT1', 'POU4F3', 'THSD7A', 'IL13RA1', 'TRAPPC9', 'LAMA3', 'MAPK12', 'FAM183CP', 'AKAP9', 'SPATA31A5', 'OR4F29', 'TCEB1', 'CDK11A', 'NLRP7', 'RETSAT', 'CCDC120', 'CCDC157', 'LINC00930', 'NKX2-2', 'TBC1D31', 'DOC2B', 'UTP11L', 'C17ORF74', 'ZACN', 'GTF3C3', 'WWP2', 'COMMD3', 'IRF2BP2', 'TATDN2', 'IQSEC3', 'NFKBIB', 'MCTS1', 'CREBBP', 'MASTL', 'NCF1', 'NOC3L', 'GPR108', 'TBC1D3B', 'ZNF580', 'LOC154449', 'IFT88', 'ZNF295-AS1', 'ARFGEF3', 'HELZ', 'C3ORF58', 'DEGS1', 'UBE2Q2', 'GNAO1', 'LINC01101', 'SNORA1', 'ARFGAP1', 'COMMD7', 'PIP4K2B', 'TSSC4', 'SF3A2', 'UXT', 'NXN', 'HEXB', 'GPR158-AS1', 'SART1', 'ZNF837', 'TRPV2', 'TADA3', 'KANK4', 'SEC24B', 'ANAPC16', 'LGI1', 'B4GALNT1', 'FAM58A', 'LPCAT2', 'CRACR2A', 'LOC642929', 'UQCRFS1', 'RIC3', 'PUS3', 'MPP2', 'BUB1B', 'C8ORF59', 'DEFB107A', 'SMTNL1', 'KCNAB2', 'NT5DC3', 'PPWD1', 'CHRNA4', 'MRPS22', 'ERICH6', 'KIF9', 'YBX1', 'SPATA3', 'HSD11B2', 'CD6', 'DRC1', 'CBX3', 'DUSP26', 'MRGPRX2', 'TMEM252', 'ATXN2', 'TEX9', 'HSPA1B', 'CRYBB1', 'VPRBP', 'WNT9A', 'MRPL3', 'ATP7B', 'GYPA', 'ARAP1', 'KRT84', 'MMP23A', 'CSNK1E', 'SNORD1C', 'MED8', 'TOP1P2', 'TRERF1', 'RCE1', 'RPL23AP64', 'TRMT10B', 'ZNF117', 'C10ORF99', 'VAV3', 'DKKL1', 'POLB', 'TMED10P1', 'SLC36A1', 'TRIQK', 'ROPN1L', 'RLN2', 'CASP9', 'DNAJB9', 'ADAM18', 'SHISA4', 'CFL1', 'PDE8B', 'GPR180', 'UBR1', 'THRA', 'IL12B', 'ZNF607', 'CLP1', 'IL1F10', 'CPN1', 'NANOS2', 'BTBD6', 'CUL2', 'SESN2', 'GJA5', 'RPP25', 'LAMB1', 'UGT2B4', 'SNORA61', 'MRPL42P5', 'KSR1', 'CLDN25', 'PRSS38', 'MMP2', 'RBM24', 'ITFG1', 'CYP1B1', 'MS4A7', 'CHURC1', 'PVRIG', 'RUNX1T1', 'KRTCAP2', 'SIKE1', 'HSPA2', 'TF', 'C16ORF62', 'PLAGL1', 'SARS', 'PPP1R35', 'MDS2', 'CCDC62', 'FAM156A', 'CCS', 'SLC5A11', 'RIN1', 'CYTH4', 'SNORD123', 'C7ORF61', 'CEL', 'LINC00115', 'KRTAP10-8', 'TOX', 'DENND2D', 'SLC4A1AP', 'ITPK1-AS1', 'C14ORF132', 'KCNMB4', 'UNK', 'SH3GL1', 'PHACTR3', 'HSD3B1', 'ANGEL1', 'SP5', 'PRR26', 'DCHS2', 'DSC2', 'ANKFN1', 'MC5R', 'ZNF133', 'EIF6', 'DCAF4', 'HIATL2', 'LSP1', 'COL23A1', 'MOAP1', 'P4HTM', 'ARHGAP10', 'CHAT', 'NAA11', 'FKBP8', 'PRSS50', 'P2RY4', 'ARL3', 'MAGEA6', 'EXOC3L1', 'OVGP1', 'TMEM47', 'TROVE2', 'HS6ST3', 'WDR20', 'CASQ1', 'PIGV', 'WFDC1', 'PNKD', 'SASH1', 'C20ORF27', 'FAM228B', 'LINC00469', 'MED25', 'DIDO1', 'MAPK6', 'CST11', 'HEBP1', 'MAD2L2', 'GLTSCR1L', 'GIF', 'ASH1L-AS1', 'DPRXP4', 'NUP188', 'PDXK', 'DDX3X', 'LINC01184', 'TTF2', 'SLC15A4', 'CXCL6', 'CROCCP3', 'RBM15', 'APCDD1', 'NOL4L', 'IGFN1', 'HNRNPA1L2', 'RASSF9', 'RNF7', 'CALCOCO2', 'OR12D3', 'MRPL57', 'SLC25A44', 'FOXL1', 'CD1B', 'MAN1B1-AS1', 'HIST1H2BJ', 'SURF2', 'NUP37', 'C17ORF67', 'IDUA', 'PRSS57', 'ZNF526', 'A4GALT', 'SPAG4', 'NHLRC4', 'FN1', 'PMS2P4', 'SLC33A1', 'SEC11C', 'NBPF1', 'PPIG', 'TRNP1', 'MYO18B', 'PNCK', 'S100A12', 'NOS2', 'DHRS7', 'VPS13D', 'PELI2', 'SPP1', 'IL17RE', 'ANKRD20A20P', 'NPB', 'DSG1', 'PEX2', 'LPAR4', 'SPEN', 'ROR1', 'NBPF3', 'CCDC83', 'ZNHIT1', 'CCDC12', 'LINC01420', 'GTF2B', 'RFC1', 'FLJ37201', 'DNAH10', 'GATS', 'C2ORF15', 'TRHDE', 'C5ORF49', 'CLDN23', 'SCUBE3', 'SHKBP1', 'NOC2L', 'DUSP10', 'RBP2', 'IVL', 'KLHL42', 'PRUNE', 'ZDHHC5', 'TDRD7', 'PLEKHD1', 'YOD1', 'PAFAH1B2', 'C9ORF170', 'FAM127C', 'TIE1', 'PRKAR1B', 'DALRD3', 'CYB5D2', 'NRG2', 'PRKD3', 'HERC2P2', 'NALCN', 'MRGBP', 'BTC', 'CHML', 'FLT1', 'CEACAM21', 'ZNF556', 'STRN', 'TTL', 'SLC51B', 'GPR88', 'HGFAC', 'DNAJB3', 'BEND2', 'ALCAM', 'KIF20A', 'CD4', 'PPFIBP2', 'LCN8', 'BLCAP', 'PQLC3', 'CLSTN2', 'ADAM11', 'COL24A1', 'RPL37', 'OR52E6', 'C2CD4A', 'PRKCD', 'CCDC112', 'OR51B4', 'CBX6', 'HAND2-AS1', 'PARD3B', 'ZNF497', 'PDIA3P1', 'TNFRSF10C', 'HINT2', 'SNORD6', 'PKD1L1', 'C5ORF38', 'ZWINT', 'MRAP', 'BMP1', 'PTH2', 'ACTR3C', 'C14ORF177', 'KCNC2', 'PP12613', 'NIT1', 'EPB41L5', 'YBX2', 'SNORD26', 'CLK4', 'ZFAT-AS1', 'SLC36A4', 'POU6F2', 'FAAH2', 'GPR161', 'GRAMD3', 'HIST1H2AM', 'ITPKC', 'RIMS1', 'CEP63', 'DKFZP779M0652', 'DNAJC30', 'CHST2', 'NDUFA3', 'HNRNPU', 'FUT10', 'RHOG', 'TWF2', 'ZFPM2', 'KIAA1586', 'CENPBD1', 'FXYD7', 'CACTIN', 'CD3EAP', 'MPO', 'NECAB1', 'DCT', 'GABARAPL3', 'PRDM14', 'STMN1', 'OR52W1', 'FMNL2', 'LYSMD3', 'TCOF1', 'PARVG', 'CX3CR1', 'LRRK1', 'PPP6C', 'ILDR1', 'LOC100132111', 'ZNF34', 'CCDC51', 'FAM174A', 'ZCCHC16', 'CDRT15', 'FAM19A1', 'LSM8', 'ZNF106', 'FBXO33', 'SULF1', 'IL22', 'ZNF655', 'TMSB4XP8', 'LOC728024', 'BOP1', 'SMARCD2', 'RAB6C', 'GFPT1', 'HDGFL1', 'ADPRHL1', 'POMC', 'JDP2', 'FNIP1', 'SRP14', 'OR2T11', 'CANX', 'CGB7', 'INSM2', 'TNNI1', 'TISP43', 'NOA1', 'FCGR3A', 'HAPLN2', 'VWA2', 'PRB4', 'FAM109B', 'RPL26', 'ATP6V1A', 'ACTR3BP2', 'RAB40AL', 'ATP1B1', 'ANKEF1', 'NANOG', 'PDLIM2', 'ATP5C1', 'TAB2', 'MYO1G', 'KALRN', 'NOG', 'CD276', 'SNORD81', 'ALX4', 'KIF21A', 'TJP3', 'ATP2B4', 'UNC45B', 'DNMBP', 'HMGXB3', 'SYNPO', 'OR52A5', 'IGF2R', 'LINC00452', 'SELL', 'CTDP1', 'RAC1', 'NAA15', 'MED1', 'CCDC82', 'TBL1XR1', 'TMEM229B', 'HMGB3P1', 'MYCNOS', 'WDR36', 'NAV1', 'TBRG4', 'SPATA18', 'PRPF19', 'OCEL1', 'ESM1', 'PRH2', 'LOC729609', 'PBOV1', 'ANXA11', 'MAFG-AS1', 'SNORD24', 'C17ORF47', 'CSF3R', 'KDM3A', 'FREM1', 'RPRD1B', 'RGS10', 'SMURF1', 'RANBP3L', 'OSGEPL1', 'MSGN1', 'LIMK1', 'CYP39A1', 'CCDC124', 'TNK2', 'CACNB2', 'HIST1H3G', 'ADRA1D', 'SSX4', 'SLC4A4', 'BCL2L10', 'TMEM41A', 'ZEB1', 'MDM4', 'MSN', 'ADGRG1', 'ART3', 'MORN1', 'GOLGA8B', 'FAM184B', 'IQCF5', 'SERPINA11', 'OR3A3', 'MRPS23', 'SCARNA1', 'TIMP4', 'AP3D1', 'FZD7', 'CACNG5', 'HLA-DRB1', 'BOK', 'GGT5', 'AOC2', 'CAPN9', 'EIF2S3', 'NABP2', 'SYNE2', 'SPRTN', 'IFNA8', 'SLC35A5', 'OR2T33', 'ELOVL2', 'GYG1', 'FLJ13224', 'PSTPIP1', 'GOLGA2P5', 'FBXL8', 'DSE', 'IRF2', 'ZFP69', 'FSTL1', 'SNAR-G2', 'CSTL1', 'ZNF224', 'SCAF1', 'RNF157', 'CNNM2', 'ESPN', 'ZNF584', 'LOC644669', 'OLMALINC', 'DOCK6', 'CNBD2', 'GUF1', 'KRT33B', 'ALDOB', 'OR2M4', 'PRG3', 'OR5K2', 'NDUFAF4', 'MRPL33', 'PEX7', 'NIPSNAP3B', 'FZD9', 'P2RX1', 'APMAP', 'PEX11B', 'C17ORF89', 'ALPL', 'FOXJ2', 'AFAP1L2', 'CNOT3', 'TEX28', 'APPL2', 'NXT1', 'VTRNA1-3', 'CXADR', 'ADGRB2', 'DHRS2', 'DNER', 'TMEM257', 'KCNG4', 'POU3F3', 'TSPYL5', 'SIGLEC9', 'SNORA8', 'KIAA1328', 'LINC01134', 'DACT3', 'SON', 'ZMAT1', 'TRAM2', 'ZNF418', 'PHLDA2', 'DTX1', 'SKA3', 'MSRB1', 'UNC119', 'TAF7', 'LCLAT1', 'NFKBIZ', 'SLC22A4', 'NUP210L', 'ZNF195', 'LCORL', 'LRRC75B', 'RBP7', 'CYP46A1', 'C19ORF45', 'SCARB1', 'SFMBT2', 'MTR', 'CD44', 'ZNF484', 'HLF', 'DCBLD1', 'CDCA7L', 'CD68', 'PON3', 'NDNF', 'TRIM29', 'USP29', 'TNFAIP2', 'C14ORF105', 'SEPT7P2', 'KIF1A', 'LINC00113', 'TDH', 'PLA2G16', 'PSORS1C1', 'CROT', 'SPATA6', 'IFT122', 'LINC00883', 'JSRP1', 'GDF5', 'SHISA9', 'SYCP3', 'IDE', 'DEFB109P1B', 'HES7', 'SMIM10L2A', 'ANKRD46', 'MEX3A', 'SDC1', 'WIPF2', 'MAGEA4', 'TBX20', 'SPINK14', 'ECSIT', 'EHD1', 'TRIP6', 'LINC00202-1', 'LPAR6', 'IRGQ', 'AKAP8', 'KIF4A', 'ABHD8', 'MIEF2', 'CLDN3', 'GNG12', 'ZNF337', 'PCDH7', 'NUCB2', 'LINC00893', 'SCN10A', 'CTSC', 'NAA25', 'SEMA4C', 'GSTM2P1', 'RBP1', 'KCTD12', 'PDCD6IP', 'PSMG3-AS1', 'HEATR3', 'PRICKLE1', 'STYXL1', 'ATP5A1', 'RPS3A', 'HDAC2', 'ATP6V1G2', 'ATP1B4', 'ZNF146', 'SNAI1', 'TBX2', 'DTD2', 'INO80', 'KHDC3L', 'NLRC4', 'ARPP19', 'DHFRL1', 'NYAP1', 'UXS1', 'LRRC31', 'XKR3', 'SAXO2', 'SNORD88B', 'CRYBA1', 'ZBTB42', 'LYAR', 'CYSTM1', 'KRTCAP3', 'CYHR1', 'LINC00482', 'TATDN1', 'FUT1', 'TVP23B', 'RGS12', 'R3HDM4', 'CGNL1', 'RMST', 'RPLP0', 'RFNG', 'DOCK8', 'ITPR2', 'DUOX1', 'LINC00905', 'TRPV5', 'TEKT5', 'ENO3', 'SERPINC1', 'HCFC1R1', 'SIGLEC10', 'PHF1', 'PCM1', 'CCDC66', 'CDK3', 'PP7080', 'ZNF749', 'TNS3', 'LRRN3', 'TBC1D13', 'MED12L', 'XAGE3', 'IGF2-AS', 'GYS1', 'HYKK', 'RPP25L', 'RPIA', 'METTL13', 'MED13', 'PLSCR1', 'RCAN1', 'TNFRSF12A', 'GPR32', 'SLC35G1', 'FAM188B', 'TSPAN18', 'CRYAB', 'MCAT', 'PTPRA', 'FAM20B', 'MSRB3', 'LRP4', 'FOXN3', 'TYMP', 'PLA2G10', 'ZNF330', 'TNFRSF6B', 'ZNF223', 'CSHL1', 'SHC1', 'SMOC2', 'RALA', 'RBL2', 'ST7-OT4', 'PROX1', 'MUCL1', 'FAM134B', 'SLC35G6', 'LARP1B', 'ATP2B1', 'ARNTL', 'CXCR1', 'ZNF321P', 'HK3', 'F7', 'UBE2NL', 'ZNF230', 'NHLH1', 'SOX3', 'OGFOD2', 'ATG7', 'SLC45A2', 'KRT18P55', 'KRT35', 'H2BFM', 'BMP3', 'GYPC', 'PTPN6', 'CDK20', 'AFF3', 'LINC00471', 'GJD4', 'SNORD116-3', 'INHBA', 'CNFN', 'SPATA31D5P', 'SLC7A9', 'ARID4A', 'FSHB', 'ARSD', 'BGN', 'AP1G2', 'CBWD6', 'PDLIM1', 'ZNF473', 'PYGL', 'TMEM41B', 'DKK3', 'ZNF213', 'ZNF69', 'BNIP2', 'KDM8', 'PGM5', 'ACIN1', 'CSNK1G3', 'PTBP2', 'TRIM24', 'FABP5', 'PDCL3', 'ATIC', 'RPL23AP53', 'CYBRD1', 'RPS11', 'PSMA3', 'P2RY10', 'EML6', 'ZSWIM5', 'METTL6', 'PROCA1', 'WDFY1', 'DFNB31', 'FCHSD2', 'C12ORF50', 'RPSA', 'SNORA75', 'C17ORF98', 'WDR41', 'RORC', 'ATP8B1', 'HSPBP1', 'STRIP1', 'ZNF566', 'OR4N3P', 'TMTC3', 'FAM76A', 'OGDH', 'ZNF92', 'COG1', 'CYP2R1', 'SAMHD1', 'RPLP1', 'LRRTM1', 'TTC37', 'PIGN', 'OR8B12', 'WIPI1', 'CNKSR1', 'SRXN1', 'LIN7B', 'ACOT12', 'MCUR1', 'MAGEB16', 'KIAA1551', 'IL1B', 'CELSR2', 'ZNF470', 'CPPED1', 'HDC', 'DNAJC24', 'TMEM178A', 'SEC16A', 'MSL3P1', 'APBB1', 'F2R', 'LOC441601', 'MRPL34', 'NUTM2F', 'MOSPD2', 'ZNF512B', 'TNFSF11', 'RPS6KA6', 'NMUR1', 'GLO1', 'GMNN', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.855753926380987e-15 NRMSE: 4.970547546219331e-16 MAPE: 2.58623228212652e-12 Pearson Correlation: 0.19548522271464516 Spearman Correlation: 0.19623451370597994 Coefficient of Determination: -1.5358226262028296 RMSE: 0.6519131709582071 NRMSE: 0.21469230066135586 MAPE: 1128.0037729240757 Predictor: ElasticNet Pearson Correlation: 0.4446043149117802 Spearman Correlation: 0.4708609543388568 Coefficient of Determination: 0.15950344606402567 RMSE: 0.4174331201315619 NRMSE: 0.11180745148829836 MAPE: 330.222836517484 Pearson Correlation: 0.3966465919166772 Spearman Correlation: 0.43786947614866845 Coefficient of Determination: 0.13430243741165937 RMSE: 0.3809021433895212 NRMSE: 0.1254411801052268 MAPE: 1641.7323026041672 Predictor: RandomForests Pearson Correlation: 0.6742512535994648 Spearman Correlation: 0.5789621756619535 Coefficient of Determination: 0.38413806424990626 RMSE: 0.35732270813147277 NRMSE: 0.0957071670366875 MAPE: 295.391109905147 Pearson Correlation: 0.6011948332670984 Spearman Correlation: 0.48537031188494756 Coefficient of Determination: 0.32318076149839847 RMSE: 0.3367957996981321 NRMSE: 0.1109157911075686 MAPE: 2093.49598342693 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['RCCD1', 'LOC100129534', 'SEMA6A', 'PLA2G4E', 'SLC12A8', 'HEATR3', 'EAF2', 'PPBPP1', 'DEFB115', 'HHAT', 'ESAM', 'TNFRSF6B', 'TMEM106B', 'TNNT3', 'DNAJB6', 'TCN2', 'AGRN', 'MITF', 'PUSL1', 'RFX5', 'USP46', 'TRAPPC1', 'HTR1B', 'SNORD116-23', 'EDARADD', 'ZHX1', 'MICAL3', 'DNAJC17', 'CEACAM8', 'ATRN', 'KCNE5', 'KLHL18', 'MRPL45', 'GAL', 'TCP1', 'ZKSCAN8', 'FOXP1', 'CTBP1-AS2', 'OR10H5', 'MSMO1', 'CD53', 'PAN3', 'KLK1', 'FLT3LG', 'TEX36', 'AOC3', 'SSX5', 'ASTL', 'TRHDE', 'TAS2R40', 'CFC1B', 'ANKRD13B', 'PRAMEF17', 'LPAR5', 'PLEKHG1', 'PPP2R1B', 'MCM10', 'DRG2', 'LVRN', 'CDC26', 'INO80B', 'HBBP1', 'AJAP1', 'SELP', 'SNORD63', 'ARHGAP6', 'LTBP2', 'OR51E1', 'HOOK1', 'SCN5A', 'OR2C1', 'SIPA1L1', 'CLEC14A', 'FOXB2', 'ITPK1-AS1', 'LINC00896', 'MSRA', 'SLC44A3', 'MTHFD2', 'LRRTM2', 'SNORD98', 'SMARCE1', 'SSH2', 'ITGA3', 'SNRNP25', 'RPS18', 'CDV3', 'C19ORF71', 'CHD5', 'IL1A', 'RUNX1T1', 'CIB2', 'SEPT2', 'HCRTR1', 'SNTG2', 'RSPH9', 'DCAF8L2', 'WDR31', 'UGT2A3', 'OR10T2', 'ANKRD54', 'PAGE4', 'TOMM5', 'CPXM2', 'LINC00282', 'ZKSCAN4', 'SCAF8', 'CLCA3P', 'PQLC3', 'ZNF281', 'EXO1', 'NUTM1', 'PCDHA6', 'MYL12B', 'RAB21', 'CCDC173', 'DLG5', 'CDC14A', 'DET1', 'MAP4K5', 'IGFL2', 'RCHY1', 'OR5AN1', 'ATAD1', 'TCEB3B', 'DAPK1', 'PLEKHG3', 'RC3H1', 'GPR18', 'SNX19', 'ZBTB3', 'NUDCD1', 'SMNDC1', 'LYRM4', 'RNF186', 'TMEFF2', 'ANLN', 'CDHR2', 'FAM3D', 'OR3A3', 'USP3', 'C2CD2L', 'GID8', 'RBM26', 'TMEM101', 'C10ORF131', 'SNORA6', 'RXFP4', 'KLF10', 'KLLN', 'TMCO3', 'DMRT2', 'OR56A5', 'SOX3', 'BLOC1S2', 'FAM189B', 'TRIML1', 'ITCH', 'SDHD', 'GRAPL', 'TRPC2', 'PAK7', 'LBP', 'BTD', 'CCNI2', 'CREBRF', 'C8A', 'ACOT6', 'PGBD5', 'IGIP', 'LYN', 'POM121L12', 'RNF146', 'SMTNL2', 'FAM229B', 'DAP3', 'HSPH1', 'FKBP10', 'ECE2', 'HS6ST1', 'GNAT1', 'THAP8', 'CELF6', 'AP3S1', 'CDH9', 'C2CD4B', 'KRTAP5-4', 'LINC00200', 'PPM1N', 'LINC01018', 'TMEM59', 'NMNAT3', 'NFKBIA', 'MSX2P1', 'C22ORF46', 'NOTCH2', 'TMOD1', 'PAF1', 'SNORA40', 'RSPRY1', 'ADGRF2', 'ENOX2', 'POP5', 'MMS19', 'POLM', 'BAMBI', 'TGFB3', 'TMEM56', 'ZYG11B', 'BTBD6', 'DBNDD1', 'CEP41', 'KANK4', 'TUBB', 'COMMD3', 'GYG1', 'LRR1', 'CX3CR1', 'ZNF132', 'CORO7', 'CTSD', 'EYA1', 'KLHL26', 'SUN5', 'TTC41P', 'ZNF232', 'TKT', 'ZMIZ1', 'SMIM10', 'FAM173A', 'ATP5G1', 'SURF4', 'RPL8', 'RRAGB', 'PLET1', 'AMDHD1', 'SIDT1', 'AHSA1', 'STRBP', 'LACTB2', 'JOSD1', 'PPP1R3F', 'YIF1B', 'NR3C1', 'SATB2', 'PFDN4', 'CLUH', 'ZNF682', 'LIN54', 'ACTR3C', 'SIRPB1', 'FOXR2', 'FAM53C', 'FZD7', 'NTSR1', 'SCOC', 'CRMP1', 'PLK2', 'HNRNPCL3', 'TMSB15A', 'KALRN', 'IGSF11', 'ASIP', 'CCDC141', 'BLOC1S4', 'P2RY11', 'C10ORF111', 'OR7E24', 'UQCRB', 'ZNF837', 'CCDC64', 'LRRC18', 'MSS51', 'LCN9', 'PF4V1', 'BRD7P3', 'OTOS', 'SPAG16', 'KLHL15', 'DHRS11', 'CELA3B', 'LAX1', 'SEC14L3', 'LTF', 'PFDN5', 'KRTAP20-1', 'SLC28A2', 'SNORD115-26', 'LENG8', 'ATP5G2', 'MCEE', 'LOC100270746', 'CDK10', 'LRRC39', 'OR2A14', 'CPSF1', 'CNTN6', 'NLRP2', 'PEX12', 'TCTEX1D4', 'IFNA1', 'INTS12', 'LILRA4', 'LINGO4', 'LCORL', 'RPL28', 'KIAA1549L', 'GJB3', 'SIRPD', 'PPP2R2D', 'ZNF480', 'TRIM46', 'EIF1', 'OR4K14', 'ZNF497', 'DUSP3', 'SLC36A4', 'ANKRD12', 'CPSF6', 'AKAP7', 'KNG1', 'SPOCK3', 'CCBE1', 'HTATSF1', 'ELAVL3', 'GPR174', 'CAMK1G', 'KCTD21', 'QSOX1', 'PADI1', 'KRT38', 'TMEM55B', 'SLC7A2', 'HMX3', 'RBM4B', 'APCDD1', 'ERMARD', 'CDK19', 'VCX', 'SLC16A13', 'TAS2R14', 'SPINK9', 'INTS4P1', 'ANXA11', 'LINGO3', 'HMP19', 'ARL13A', 'RBM6', 'DGCR8', 'OBFC1', 'CTGF', 'CCL17', 'DIP2A', 'KPNA7', 'PDYN', 'ZNF280D', 'ADGRA3', 'RALGPS1', 'AKT1', 'NWD2', 'ABCA4', 'HGF', 'TP53AIP1', 'SEPT8', 'LINC00319', 'ERAP2', 'ABCA9', 'C11ORF45', 'PPP1R1A', 'SNCB', 'CSDC2', 'ROPN1', 'PROM1', 'CRYGB', 'AQP4-AS1', 'FCGR1A', 'DKFZP434L187', 'TSNAX-DISC1', 'PKIG', 'DAXX', 'MYO5C', 'PITPNB', 'HIST1H2BK', 'OR9A2', 'KCNH8', 'R3HDM1', 'BMS1P20', 'KIF1B', 'ZNF37A', 'SETD6', 'C14ORF169', 'KRTAP6-3', 'PRDX6', 'GUK1', 'ATP6V1A', 'FOLR2', 'SNAR-A2', 'WIZ', 'SNW1', 'DRICH1', 'MPLKIP', 'PAPSS2', 'CMC2', 'PLXND1', 'LGALS7B', 'SNORA45A', 'C17ORF67', 'FAM214B', 'IP6K3', 'NDUFAF5', 'MKRN3', 'BBS12', 'UNC93A', 'PKHD1L1', 'LRRC66', 'LOC283922', 'GAGE12J', 'FLJ37201', 'LOC654342', 'STAB1', 'ARL16', 'VPREB1', 'ZBTB42', 'SNORD114-6', 'PRNP', 'HSD3B7', 'TOB2P1', 'AKR7A3', 'MAMSTR', 'RANBP1', 'FCRL3', 'CNTD2', 'SLFN11', 'CAPG', 'MLF2', 'CD207', 'SYP', 'ATRX', 'MTMR2', 'SLC52A1', 'DCDC2', 'EXD1', 'COX18', 'INSL3', 'RNF13', 'CENPM', 'GSTT2', 'ASCL3', 'KCTD4', 'LINC00894', 'ANXA2P2', 'TNFRSF11B', 'TCERG1', 'NOTUM', 'BCL10', 'NUPR1L', 'USH1C', 'HSFX2', 'SLC44A5', 'CCDC28B', 'TOR1A', 'SRRM4', 'PPM1L', 'ATP6V1C1', 'FBXL16', 'C12ORF42', 'DCST1', 'ZNF225', 'C14ORF132', 'FAM122C', 'GPR37', 'GCNT1', 'SPRY2', 'GOLGA6L6', 'ANAPC13', 'UBE2V2', 'SOCS7', 'FAM160B2', 'SPIN4', 'OR2V2', 'NRXN1', 'SLC25A18', 'POLG', 'MYOF', 'ADGRA2', 'RD3', 'HAND2', 'NOL10', 'CLEC11A', 'CERS6', 'TYMSOS', 'MRGPRE', 'AIPL1', 'PCBD1', 'SH3RF3', 'AMICA1', 'ISX', 'OTOA', 'CHRNA7', 'ATP6V1B2', 'CYP2B6', 'C10ORF25', 'LYST', 'SSX9', 'TMEM79', 'WDR78', 'MDP1', 'ZNF473', 'SLC2A4RG', 'RPPH1', 'TRIQK', 'NRG2', 'GIMAP4', 'TRAF6', 'EPS15', 'XDH', 'TBXA2R', 'ATP10A', 'P2RY4', 'SLC22A24', 'KRTAP9-2', 'S1PR4', 'C6ORF141', 'LINC00895', 'HDAC10', 'ZBTB10', 'WARS2', 'PIWIL4', 'SECISBP2', 'MED9', 'C11ORF95', 'TBL3', 'G6PC2', 'HOXB5', 'FIP1L1', 'KRT12', 'BID', 'PTH', 'C11ORF84', 'PRDM13', 'SH2D3C', 'SGPP1', 'RBBP8', 'MCM2', 'BCL7B', 'PDGFRA', 'CENPP', 'SNORD91A', 'ZFHX3', 'ADAM10', 'IFI27', 'AARSD1', 'TNFRSF14', 'TBC1D3B', 'GJC1', 'MEOX1', 'PITPNM1', 'FAM89B', 'NYAP1', 'CDH23', 'SLC39A2', 'SREK1', 'BPIFA2', 'NUBPL', 'KMT2E-AS1', 'FAM120C', 'RAPGEF5', 'DMTN', 'WDPCP', 'SNORA70B', 'NRIP2', 'LYZL2', 'MXD4', 'CYFIP2', 'C8ORF46', 'SSR1', 'MYO5B', 'ZNF175', 'C14ORF79', 'OR10S1', 'LDLRAD4', 'TBC1D13', 'ZNF142', 'EVC2', 'SLC6A15', 'ARGLU1', 'CMTM6', 'GNA11', 'DENND1A', 'KRT83', 'BTN2A3P', 'PPWD1', 'RNF112', 'SYNM', 'RGR', 'EMC3', 'CCDC74A', 'HEPN1', 'EGOT', 'FLJ33360', 'TCEAL6', 'ANGPTL2', 'BCS1L', 'PPP6R2', 'VPS28', 'B3GNT8', 'LDLRAD2', 'ZNF177', 'KRT81', 'CACNA1C', 'DHX15', 'UTP20', 'GTPBP3', 'IQCC', 'DNAJC19', 'ZNF768', 'IGFBP7', 'DIS3L2', 'GAGE2D', 'ABRA', 'GPR141', 'CACNB3', 'COQ10A', 'MNDA', 'FBLN5', 'ALOX15', 'RHBDD3', 'ALOX12', 'ZNF585A', 'NUGGC', 'GRIN3B', 'GPR157', 'MT1X', 'TNC', 'ANP32A-IT1', 'XYLB', 'CTXN2', 'MMP23A', 'TMEM256', 'AHCTF1', 'LGMN', 'STBD1', 'RPS4Y1', 'RAB8B', 'RDH12', 'XIRP2', 'DDX5', 'SARS2', 'NPAS4', 'HIST1H4C', 'FAR2', 'ZNF436', 'HNRNPK', 'KANSL1', 'SLC24A2', 'PLEKHO2', 'PRSS53', 'MRAP2', 'SPPL2A', 'OR2A4', 'CHRNE', 'HENMT1', 'SENP3', 'ZDHHC23', 'HPS3', 'SPSB1', 'UBN2', 'HLA-DRB1', 'GPRIN3', 'TMEM134', 'GNG13', 'CD63', 'GARS', 'SDPR', 'KLRK1', 'GOLGA6L1', 'ZNF335', 'SPON1', 'SIRPG', 'SNORD114-31', 'SPOCK2', 'KCNH7', 'SENP6', 'CPO', 'PTDSS1', 'RHPN2', 'LYG1', 'MRGPRX1', 'GORASP1', 'CEACAM3', 'ZNF331', 'NKIRAS2', 'TADA1', 'NT5DC3', 'SDR42E1', 'GNRHR2', 'PLEC', 'ATP2B4', 'HAR1A', 'UBE2J1', 'LINC00883', 'PTER', 'UTP6', 'AOAH', 'RNF180', 'PARP8', 'BRIP1', 'ATP13A1', 'DCX', 'GRIK1-AS1', 'GSTTP1', 'C1ORF122', 'DNAJC3', 'FOXA1', 'PCID2', 'SARAF', 'PUS1', 'ZNRF3', 'ADAM7', 'CCL13', 'PLK4', 'NGRN', 'SLC2A3', 'RAD21L1', 'ZCCHC14', 'CT47A2', 'CYP2B7P', 'FRG1B', 'NXPH1', 'STX16', 'FTL', 'ZNF311', 'ARRDC2', 'FBP2', 'POU3F1', 'TUSC7', 'CRSP8P', 'BIRC6', 'KIAA1522', 'RABL2A', 'TFIP11', 'SPI1', 'VASH1', 'PFDN6', 'JUN', 'SNORD48', 'TLDC2', 'ARHGAP44', 'SLC5A12', 'PLA2G3', 'SKA3', 'KIAA1024', 'DCD', 'SIPA1L3', 'CASP8AP2', 'LOC148696', 'CEP68', 'ASPH', 'PHOX2B', 'BASP1', 'CHCHD5', 'CHIT1', 'GNS', 'GUCA1A', 'PSME2', 'CHD4', 'ST3GAL5', 'CDK2', 'SUPT5H', 'LAMTOR3', 'CEP44', 'FAM47E', 'HINFP', 'SNORA7B', 'LOC100130691', 'SAMD5', 'NDUFS5', 'PDE4C', 'C14ORF177', 'TCEAL2', 'ATL2', 'IFNW1', 'SNORD114-9', 'NFATC4', 'LOXL2', 'BMPR1A', 'TMA7', 'KCNMB2', 'DUS4L', 'LINC00174', 'TCTN3', 'TAS2R46', 'FGF8', 'LRRC56', 'SYT15', 'SNAI2', 'KATNA1', 'LOC113230', 'CCDC106', 'LINC00899', 'METTL1', 'PIK3R3', 'PRAMEF9', 'KIAA1324', 'ZNF428', 'NXF2', 'SLC38A8', 'RDH16', 'CRTAM', 'SNORD115-22', 'BRD3', 'MED30', 'MED1', 'DNAAF1', 'NUDT16P1', 'FAM170A', 'CACNA1S', 'LTB', 'POU5F1B', 'OSBP2', 'PRR12', 'GTSF1', 'PCBP4', 'FGG', 'C19ORF53', 'ERICH3', 'TEAD3', 'C16ORF58', 'POLR2A', 'HYAL3', 'PPP1R32', 'C1QTNF4', 'PDCL2', 'MT2A', 'CYP4F11', 'SMCHD1', 'MAGEA1', 'GOLGA2P10', 'OSM', 'HSP90B1', 'RHOU', 'ZNF687', 'TMEM205', 'PCDH8', 'OLAH', 'TMEM2', 'TMED6', 'PEX11B', 'PRUNE2', 'ASIC5', 'CTU1', 'SRSF11', 'ENTPD5', 'CWC15', 'MAEL', 'OTULIN', 'RAB5C', 'PPP2R5B', 'HCFC1R1', 'EIF5A', 'ACOX3', 'LBX1', 'ZSCAN20', 'SRD5A2', 'ST3GAL3', 'MYOD1', 'NADK', 'CEP128', 'C10ORF53', 'GPHB5', 'CENPF', 'PER3', 'VHL', 'KIF13B', 'KCNIP4', 'CUEDC2', 'SMCO4', 'WRN', 'WDR47', 'TUBB1', 'GNAL', 'CTTNBP2', 'SPATA33', 'TAX1BP1', 'PRORSD1P', 'SSNA1', 'TBL1Y', 'RABEP2', 'COPE', 'ASF1A', 'CTDP1', 'NLE1', 'VPS52', 'LRRC17', 'NHEG1', 'FRMD4B', 'BLNK', 'PRKG1', 'C1ORF194', 'WDR27', 'MOB3B', 'KIR2DL4', 'RPL38', 'NEK2', 'RGS3', 'C1ORF186', 'HCRTR2', 'FGFRL1', 'FBXW7', 'JUNB', 'LHX2', 'HMGN1', 'F10', 'PKD1', 'PRR27', 'CCM2', 'ARHGAP42', 'DSCAML1', 'RBM28', 'ENAH', 'SCLT1', 'CD55', 'RGS16', 'CHST6', 'RSPH3', 'SNORD4A', 'COX19', 'NXPH4', 'UBLCP1', 'SEC22C', 'NPAS2', 'ZDHHC16', 'MAGEE1', 'CST9L', 'PRAME', 'ZNF804A', 'ZNF236', 'SMS', 'PDF', 'SMYD4', 'NTN4', 'IL13RA2', 'CLEC19A', 'FOXN3', 'TENM2', 'FOXM1', 'FBXL19-AS1', 'SENP2', 'SRPX2', 'TMEM87A', 'CLIC2', 'PDCD1LG2', 'SPRR4', 'DMWD', 'PRB3', 'EIF4ENIF1', 'RNF7', 'ZNF678', 'PLA2G10', 'TACR2', 'C3ORF30', 'TIE1', 'CCDC80', 'LCE3D', 'LOC151174', 'CD3EAP', 'NR1H3', 'TPCN2', 'HPRT1', 'CFHR5', 'ZNF57', 'MEGF6', 'SCARNA16', 'SLC50A1', 'CCDC27', 'ZNF544', 'KCND1', 'KCNK2', 'SLC30A9', 'PRELID2', 'HOTAIR', 'ATP5G3', 'DUSP4', 'TM9SF1', 'KRTAP10-5', 'NAGLU', 'C9ORF41', 'MYL2', 'SNORD114-20', 'KRT80', 'KLF4', 'TCAM1P', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 3.065093543514695e-15 NRMSE: 6.028901541138267e-16 MAPE: 3.5127325506315237e-12 Pearson Correlation: 0.11294694019605143 Spearman Correlation: 0.170924787825578 Coefficient of Determination: -1.285392720657828 RMSE: 1.1588092556942557 NRMSE: 0.28839731606835467 MAPE: 255.64079151996313 Predictor: ElasticNet Pearson Correlation: 0.49769445746652813 Spearman Correlation: 0.47366573773125037 Coefficient of Determination: 0.14031779881479967 RMSE: 0.6721978857001765 NRMSE: 0.1322183095397672 MAPE: 641.0918895394703 Pearson Correlation: 0.4251098865741581 Spearman Correlation: 0.44749292751926645 Coefficient of Determination: -0.002154102327568408 RMSE: 0.7673593510238708 NRMSE: 0.1909756728363831 MAPE: 251.72927971141218 Predictor: RandomForests Pearson Correlation: 0.6159245108216087 Spearman Correlation: 0.5809162714563062 Coefficient of Determination: 0.2795943375634814 RMSE: 0.6153422474388993 NRMSE: 0.12103506047185275 MAPE: 516.635706823953 Pearson Correlation: 0.43980922357891883 Spearman Correlation: 0.4426592527558288 Coefficient of Determination: 0.06052721250058046 RMSE: 0.7429740374001202 NRMSE: 0.18490680605264187 MAPE: 245.272853018271 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['TRMU', 'TULP4', 'MRPS35', 'IPPK', 'ARHGEF9', 'TRIM63', 'CBR3', 'EIF2S2', 'TSPY3', 'NF1', 'GPR34', 'HCAR3', 'DOCK5', 'FAM118B', 'SOX17', 'DZIP1L', 'TBPL2', 'OAS3', 'PFDN1', 'FBXO44', 'NUDT12', 'HEXIM2', 'KLHL6', 'ISCA1P1', 'TNR', 'CNNM2', 'PALB2', 'KMO', 'TLR7', 'SNAR-D', 'ZBTB45', 'GOSR1', 'CES1P1', 'RNF138P1', 'NR2C2AP', 'CHL1', 'C17ORF49', 'ASL', 'PSAT1', 'GALNT4', 'OC90', 'SNORD114-18', 'RBBP7', 'CD22', 'OR2AE1', 'METAP2', 'KRT73', 'ARMCX2', 'RPL11', 'UBE2QL1', 'SLC6A18', 'FGD3', 'TMED5', 'HNRNPH1', 'ROCK2', 'HGH1', 'ZNF843', 'LINC00282', 'NCAM2', 'B4GALT2', 'GULP1', 'CRLF2', 'FXYD4', 'CCR10', 'ZNF521', 'CD8A', 'TOPBP1', 'SIX5', 'CAV1', 'DEFB105A', 'MOGAT2', 'OR10S1', 'LYPD8', 'RAB42', 'SMCO4', 'INTS4', 'TMEM249', 'KMT2E-AS1', 'SOX18', 'LUC7L3', 'SUPT5H', 'STAT5A', 'GLIS3', 'OR13G1', 'PLA2G4C', 'SOX3', 'FOXQ1', 'KCTD20', 'EMCN', 'ERBB4', 'DRAM2', 'MYOM1', 'SMG1', 'DCUN1D4', 'UBTD1', 'ROR2', 'UCP3', 'RNF144A', 'FGF4', 'CIDEB', 'CKLF', 'INO80C', 'CSGALNACT1', 'ODF3B', 'TSN', 'CALML4', 'SSMEM1', 'MRPS23', 'PRKAB2', 'DOCK2', 'CAPN5', 'MTMR9LP', 'IFT27', 'CNTN1', 'NISCH', 'IGSF21', 'MROH2B', 'RBP7', 'C1ORF95', 'OOEP', 'PAX8', 'CLDND1', 'SLC39A8', 'SLC35F4', 'SNORD51', 'DCUN1D5', 'NUP35', 'USP11', 'LMLN', 'PDILT', 'HRASLS5', 'PARP12', 'NXPE1', 'RPLP1', 'GUSBP2', 'NUDCD3', 'SLC35A5', 'SPR', 'RNASEH2C', 'SH3GL2', 'DGCR9', 'DMTF1', 'PRR15', 'ARHGAP36', 'UGT3A1', 'SBSPON', 'TCF19', 'SNRPA', 'OR7G2', 'FDPS', 'RGCC', 'KLF14', 'BACH2', 'SLC4A10', 'KRTAP22-1', 'PCBP1', 'VTI1B', 'DCAF6', 'STK3', 'PTPRR', 'CDH20', 'ABLIM3', 'OR4D2', 'S100A7', 'ACTRT3', 'WHAMMP3', 'TRIM52', 'AGT', 'EME1', 'LINC01548', 'TPTE2P3', 'ZNF599', 'LYPLAL1', 'BNC1', 'MIEF1', 'SWAP70', 'WNK3', 'RRBP1', 'ATP10A', 'GOT1', 'PEX3', 'VAT1L', 'NDUFAF7', 'ATP13A3', 'ABCA8', 'SURF4', 'LLGL1', 'POLL', 'PDIA2', 'TTLL3', 'MXRA7', 'OR2A2', 'AQP7P3', 'OSER1', 'TOB2P1', 'MT3', 'PEX7', 'SLFN11', 'DZANK1', 'CBX3', 'CD6', 'TMEM108', 'EFNA5', 'RNF123', 'TOLLIP', 'EIF3A', 'KMT2E', 'PCDHB4', 'PRKAR2A', 'POLR3D', 'ADGRG1', 'KLRD1', 'KRT9', 'ZCCHC9', 'MCMBP', 'NPFF', 'HSF2', 'HMGA1', 'CRB1', 'SIPA1L2', 'OR52N2', 'CAV3', 'ARMC10', 'PAXIP1-AS1', 'SLC2A7', 'BEND7', 'RPL7A', 'SLC22A2', 'NPIPB5', 'MRPS28', 'CNTRL', 'ZBED9', 'BCL2L10', 'SPTBN1', 'DNAJB7', 'TMEM205', 'RPL36', 'PPOX', 'SYT2', 'ZNF321P', 'KGFLP2', 'AMPD2', 'CMTR2', 'RHOU', 'TSPAN10', 'SNORA49', 'FSHB', 'HILS1', 'ASAP1-IT1', 'RUFY3', 'ATP6V0A4', 'CLPSL2', 'SOAT1', 'PLIN1', 'YWHAB', 'GUCY1A3', 'IFIT2', 'UCKL1', 'GAGE12F', 'CHN2', 'GAL3ST1', 'EDF1', 'TAC1', 'CPNE2', 'HINT2', 'SNORA71D', 'CIC', 'RAD1', 'FKRP', 'STEAP2', 'VAPA', 'ATP6V1F', 'PRR18', 'DAB2', 'MROH8', 'TSC22D3', 'CATSPER3', 'CNBD1', 'DNASE1L1', 'C6ORF201', 'QRICH1', 'PCDHGA5', 'IFT122', 'PPP2R4', 'TAF7', 'AP3D1', 'LAIR2', 'THEMIS', 'DCST1', 'DNMT3A', 'CNTNAP3', 'PRL', 'LDLRAD1', 'ARHGAP19', 'JAKMIP1', 'PRSS50', 'HAGH', 'ARPC1B', 'RPP25L', 'HEPACAM', 'RUNDC3A', 'EDN2', 'METRN', 'GSAP', 'CEP135', 'CPT1A', 'BCO2', 'CD48', 'CDK19', 'LRRC47', 'CDC14B', 'CAMKK1', 'RPSAP58', 'ZNF346', 'HECTD4', 'TMEM161A', 'RABAC1', 'LOX', 'ASB9', 'LGALS1', 'PPP1R9A', 'FAM127C', 'ZNF354B', 'TGFBR2', 'MAPK8IP1', 'DBX2', 'TIMELESS', 'BCL2A1', 'COPB1', 'LOC284661', 'SPRR2A', 'KRTAP27-1', 'BRWD3', 'ZNF436-AS1', 'MBOAT1', 'RBSN', 'APCS', 'OR10A5', 'ANKDD1A', 'CDKN2D', 'PRR27', 'OGG1', 'PRAMEF1', 'CLCA3P', 'KIDINS220', 'PRKD1', 'TTC30B', 'LOC400940', 'CCNG2', 'BPIFB6', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.9552987694419578 Spearman Correlation: 0.8726091783212059 Coefficient of Determination: 0.9125956889656522 RMSE: 0.15160439959335356 NRMSE: 0.03658672191359258 MAPE: 38.267665899951886 Pearson Correlation: 0.5555334093615032 Spearman Correlation: 0.4560774558579651 Coefficient of Determination: -1.0266603156542913 RMSE: 0.5954573368120969 NRMSE: 0.3236198766363388 MAPE: 90.27991225214862 Predictor: ElasticNet Pearson Correlation: 0.6720952620816316 Spearman Correlation: 0.577057197884043 Coefficient of Determination: 0.22261590650765717 RMSE: 0.45212987335143767 NRMSE: 0.10911259824587631 MAPE: 100.86734885846624 Pearson Correlation: 0.7016410127557164 Spearman Correlation: 0.6378841088674276 Coefficient of Determination: 0.26590222251113194 RMSE: 0.35837451938382703 NRMSE: 0.194769819066314 MAPE: 68.4398513907274 Predictor: RandomForests Pearson Correlation: 0.8596366725867389 Spearman Correlation: 0.7111908076609232 Coefficient of Determination: 0.734454102769179 RMSE: 0.26425010941127014 NRMSE: 0.06377153495940105 MAPE: 67.75773471253586 Pearson Correlation: 0.8346258678121429 Spearman Correlation: 0.7370146166029437 Coefficient of Determination: 0.6936956094557645 RMSE: 0.23149242260143713 NRMSE: 0.12581178299960172 MAPE: 40.63217946717462 Protein: CCND1 x_train_column_count: 859 x_train columns: ['ZNF385D', 'CASS4', 'ARL5C', 'MBD1', 'CCK', 'ZDHHC16', 'GMIP', 'LINC00961', 'BLMH', 'AKAP12', 'WRAP53', 'RIBC1', 'MROH5', 'TMEM232', 'MEF2B', 'EFTUD2', 'TFAP2C', 'SHANK1', 'MAP2', 'C3ORF52', 'PAXBP1', 'AGAP2-AS1', 'MYPOP', 'TBRG4', 'FLOT2', 'LCE6A', 'EIF6', 'DNAJB4', 'KRT17P5', 'ZNF77', 'SCLT1', 'SLC35F5', 'NEIL2', 'FAM58BP', 'RANBP1', 'GRIK1-AS1', 'IGSF9', 'ZBTB8B', 'RPL23', 'MAPRE2', 'MICALCL', 'DIO3OS', 'RFX4', 'SLIT3', 'AFMID', 'ZFAND3', 'DIDO1', 'RAB11A', 'PIWIL3', 'TECTA', 'SLBP', 'MTUS1', 'POPDC2', 'LINC00889', 'FBN3', 'ENTPD8', 'SHISA9', 'DCTN6', 'ARHGAP42', 'UBXN10', 'RAB41', 'GINS2', 'ZMPSTE24', 'TNFRSF13B', 'NDRG4', 'SCARNA14', 'C21ORF62', 'RAB40AL', 'OR52K1', 'GUCY2EP', 'DRP2', 'NOXO1', 'MYH10', 'MORN1', 'MAPK15', 'LRRC2', 'AKAP2', 'CACNA2D4', 'NAGA', 'SMG1P3', 'CMTM6', 'HLA-J', 'XK', 'GUCY2C', 'NBN', 'PSMD11', 'ZMYM5', 'SLC35E2', 'SAYSD1', 'PLGLA', 'CLEC4D', 'PGA4', 'KREMEN1', 'COMP', 'HINFP', 'LY75', 'CPA1', 'ZNF546', 'FAM83D', 'AOX2P', 'LINC01558', 'SPATA31D4', 'EGFLAM', 'SNORD113-7', 'ZCCHC17', 'TPPP', 'SLC25A37', 'DDHD1', 'CDK5RAP2', 'MTRF1L', 'AGO3', 'JAK1', 'COX7B2', 'CLCN1', 'DEPDC4', 'LRRC25', 'TTLL6', 'NUMA1', 'MS4A10', 'AKAP8', 'CDK16', 'SEMG2', 'CCDC142', 'JADE1', 'SGCZ', 'ZRANB3', 'GPATCH1', 'CDS2', 'ST20', 'PLSCR2', 'STYX', 'ASIC5', 'C16ORF74', 'OR2V2', 'FAM169A', 'KRTAP10-2', 'XPA', 'MGST2', 'SLC22A24', 'SSPO', 'ZNF705D', 'ZEB1', 'ZNF429', 'CLCA2', 'OR2S2', 'SNX4', 'ZNF469', 'CSTA', 'NLRP14', 'NRBP1', 'TM4SF4', 'RIPPLY1', 'AP1G1', 'DCP2', 'SPINK5', 'PNLIPRP3', 'CLEC3A', 'UQCRBP1', 'STRADB', 'KLHL4', 'PRPF40B', 'DEFB106A', 'FBXO11', 'ERCC3', 'KCTD3', 'OR2L2', 'SYT17', 'DDTL', 'CR2', 'XKRY', 'FLRT3', 'CIDEA', 'NRSN1', 'TNK2', 'JCHAIN', 'SEPHS2', 'ZNF625', 'TMIGD1', 'GRASP', 'CLMP', 'DCUN1D2', 'SYNJ2BP', 'BTBD11', 'SH3D19', 'OR6C2', 'GTPBP10', 'POLM', 'RNF208', 'TOMM7', 'GJD3', 'DIRC2', 'HIVEP1', 'C1ORF109', 'BARHL2', 'ZNF296', 'FBXO34', 'B4GALT3', 'APMAP', 'NXF3', 'ZNF117', 'KIAA0355', 'MEPCE', 'IFNA10', 'SRP9', 'ASTN1', 'LRRC45', 'DUSP23', 'FAM105A', 'RNF2', 'EEF1DP3', 'UQCRB', 'RBL2', 'EIF3A', 'PRKCQ', 'FXR2', 'LBX1', 'SNORD70', 'COX4I2', 'KIAA0040', 'KIF3B', 'RPS16', 'SLC5A6', 'FAM9C', 'IRAK1BP1', 'OR4C46', 'DKKL1', 'IL20RA', 'IFIT1', 'FSCB', 'INPP5A', 'C1ORF159', 'SLC35F3', 'TPT1', 'CLN6', 'GREM1', 'AQP7', 'DENND4B', 'EIF2S3', 'HEYL', 'DDX18', 'HNRNPA3', 'CXCL8', 'GNA14', 'PREX1', 'KATNBL1', 'VWA3A', 'KRBA2', 'RAB11B', 'LINC00552', 'TUG1', 'EPHA1', 'MED27', 'VARS', 'BAHCC1', 'H1FX-AS1', 'ZIC2', 'PDE6H', 'CABP5', 'SUCNR1', 'NUP98', 'GCSAM', 'ZNF833P', 'IGFL1', 'KBTBD8', 'KDM4B', 'ITPA', 'TBC1D3', 'FGG', 'SNORD26', 'OR10H2', 'WDR83', 'RFC1', 'RAD50', 'ALMS1', 'XKRY2', 'UBE4B', 'CNST', 'TTC19', 'NUBPL', 'LOC284009', 'STH', 'ANP32E', 'SFXN5', 'PRKAR2B', 'FSTL1', 'TSTD2', 'MSRB3', 'CCDC174', 'SLC16A13', 'ANXA8L1', 'NOX3', 'ARHGEF7', 'FBXO10', 'UG0898H09', 'LOH12CR1', 'HIF3A', 'CYP4F11', 'FAM214B', 'CAMKV', 'C1ORF158', 'USP15', 'NIP7', 'HIST3H2BB', 'CES4A', 'SORBS1', 'ASB12', 'TMEM104', 'NET1', 'SRGAP1', 'ATP2A2', 'SV2C', 'WBSCR22', 'IFNL3', 'KCMF1', 'FAM151B', 'IFNA14', 'MCTS2P', 'TAB3', 'EPCAM', 'COQ10B', 'MSMO1', 'RBMS3', 'ANKRD13A', 'FSHB', 'CREBBP', 'XIRP2', 'SOD1', 'RHBDD2', 'NHSL1', 'C22ORF46', 'MYOF', 'PTRHD1', 'KLF9', 'DNAJC13', 'RGN', 'COL4A6', 'FAM86JP', 'SPRTN', 'C17ORF85', 'PRDM10', 'FTH1', 'FAM225A', 'DDHD2', 'CX3CR1', 'JMJD6', 'SERF1A', 'MELK', 'NEDD8', 'PCNP', 'FLJ37201', 'KCTD5', 'PTPRU', 'WDR72', 'RPLP0', 'C16ORF90', 'SLC35F1', 'APOL5', 'SNORD116-15', 'RAD23A', 'XKRX', 'MYOM2', 'OR9K2', 'MYOM1', 'GLIS3', 'KCTD1', 'RASSF3', 'ARHGAP1', 'RNF39', 'FUT9', 'PTP4A1', 'CDK1', 'IGF2R', 'SNORD78', 'ZDHHC14', 'PICK1', 'FAM71E2', 'SLC44A3', 'CNTF', 'RAD51AP2', 'PADI6', 'SNORD114-19', 'KRT25', 'PKD1', 'NDUFB8', 'DCTN2', 'CCDC144CP', 'MED26', 'TOMM22', 'TCL1A', 'POLR1D', 'GGCX', 'CDH24', 'DNAJC21', 'ADGRF4', 'ZAR1L', 'EHF', 'DUSP15', 'HP', 'TMEM52B', 'RTEL1', 'TICRR', 'MAPK8', 'ECM2', 'SH3BP5L', 'HEBP2', 'NFATC3', 'CDC27', 'LOC647859', 'PCDH11Y', 'LRRC73', 'SEMA7A', 'LINC01096', 'RSU1', 'C1ORF54', 'FAM217A', 'ARFGAP1', 'SCIMP', 'MAZ', 'HNRNPH1', 'CHAC1', 'PCK1', 'TECRL', 'SLC22A16', 'ZP4', 'TTC39A', 'MDH1B', 'SND1-IT1', 'KCNV1', 'ZDHHC15', 'NDUFB5', 'KLHL38', 'DHX33', 'GPT2', 'RNASEK', 'NDUFAF2', 'SPRR2C', 'PLD2', 'FLCN', 'PIP5K1C', 'GPR180', 'SLC45A3', 'CIAPIN1', 'GTF3C5', 'SNRNP200', 'CYP11A1', 'CCDC102A', 'RNASE2', 'KHDC3L', 'SMIM3', 'FAM83F', 'KRT81', 'NFAM1', 'USP28', 'SIAH3', 'EXOC3L1', 'PCDH20', 'SRPK1', 'PEX2', 'ZIC4', 'SLC30A5', 'RAD18', 'ARPC5L', 'ERCC8', 'GHRLOS', 'ETV1', 'WDR43', 'CETN1', 'PAFAH1B3', 'KIF17', 'MTOR', 'CXCR4', 'PCDH11X', 'MRPS23', 'PM20D2', 'SLC4A1AP', 'CIZ1', 'SYAP1', 'KCP', 'GPR39', 'FAM181A-AS1', 'CD1B', 'ARG2', 'CTPS2', 'SPEF2', 'DHDH', 'TMEM74', 'TACC1', 'ITCH', 'CRYM-AS1', 'OR5K2', 'ATP5D', 'PLEKHG3', 'PI4KB', 'FBXO6', 'CUTC', 'MRFAP1', 'RAB4A', 'CKMT1B', 'SNORA30', 'ATP6V1F', 'IFIT3', 'HNRNPU', 'LSM7', 'TTYH3', 'UBE2V2', 'CHKA', 'DAPK3', 'DLG2', 'NAA35', 'MYH9', 'CEACAM7', 'MBD5', 'NAV2', 'DUS3L', 'MBL1P', 'C1QTNF1', 'LOC389033', 'SPAG1', 'CDH3', 'MPV17L2', 'EXOSC4', 'RIPPLY3', 'RASAL3', 'MCM3AP', 'WDR93', 'ARHGAP27', 'LINC00852', 'OPRL1', 'CCT4', 'WDR7', 'ZNF17', 'FAM74A3', 'ZFP30', 'POLI', 'FGL2', 'SLC7A1', 'LSG1', 'GPHA2', 'EGFL7', 'HPS5', 'HDAC9', 'MAT2A', 'SH2B1', 'ZNF394', 'FREM2', 'PLA2G6', 'PCDHB10', 'TTTY6B', 'THBS3', 'HSPB2', 'RELL1', 'FAM175A', 'SLTM', 'CCDC173', 'C10ORF88', 'PSKH2', 'DERL1', 'SASH1', 'DYDC1', 'CT47A9', 'PTBP1', 'IRS1', 'ARHGAP12', 'PRKCG', 'SPATA31D5P', 'CCDC117', 'BBS9', 'THOC5', 'SAMD4B', 'ZNF284', 'SNORD58A', 'INTU', 'KIF20B', 'TOP3A', 'SLC12A3', 'RBM24', 'ADH7', 'PNPLA4', 'CYP24A1', 'BTG3', 'KIF6', 'KATNAL2', 'PKIG', 'NTHL1', 'TRIM62', 'C8ORF59', 'SUCO', 'C10ORF82', 'C3ORF62', 'UMODL1', 'TAF1A', 'ZNF222', 'DTNBP1', 'GRAMD2', 'EFCAB7', 'MS4A7', 'MTDH', 'PDZD4', 'DNAJB3', 'JOSD2', 'ARHGEF6', 'OR4C15', 'NOX5', 'MC2R', 'ZC4H2', 'RASA4', 'SCAMP3', 'WDR49', 'PARP14', 'SPATC1L', 'ZNF738', 'SOX1', 'CBWD6', 'ARL4A', 'CTXN2', 'DNAAF2', 'AGRP', 'FAXC', 'IL1RAPL1', 'HEPACAM', 'SGOL2', 'MYEOV2', 'VPS18', 'CHRNA3', 'DDB2', 'C2ORF76', 'PAFAH2', 'CRYBB1', 'DSN1', 'CDK5R1', 'SASH3', 'SLX4', 'HECA', 'SNORD114-9', 'LGALS1', 'TTC41P', 'RPL12', 'TSTD1', 'SDHAF3', 'BMP7', 'SCARNA6', 'ZNF829', 'IL26', 'LRRC3B', 'TMEM95', 'KIF18B', 'ZNF579', 'MASP2', 'GALNT2', 'LOC644936', 'VSX2', 'SIAE', 'GBP4', 'SRSF8', 'OR11H1', 'VILL', 'CLUH', 'ZNF271P', 'N4BP2L2', 'ZFAND1', 'N6AMT2', 'MSH3', 'LOC100272217', 'KLHDC8B', 'PRODH', 'LOC100128573', 'C11ORF54', 'PDE3A', 'CRB3', 'MXRA7', 'SGCB', 'WDR83OS', 'SKIV2L', 'SLC25A14', 'DYM', 'RRP7A', 'RELN', 'WTIP', 'FKBP6', 'PHACTR2', 'PADI3', 'ZBTB8OS', 'SEPW1', 'MYEOV', 'C16ORF72', 'SLC22A1', 'ACOT12', 'LPGAT1', 'TPM4', 'ARL13A', 'ADRBK2', 'ECT2L', 'NOM1', 'SNORD54', 'MTERF3', 'NDUFA11', 'LOC285740', 'ZBED8', 'RDM1', 'C11ORF65', 'HIST1H1E', 'ZSCAN21', 'KLHDC1', 'SLC25A24', 'C1ORF189', 'ARL9', 'TINF2', 'CDS1', 'TCHP', 'MDN1', 'TMEM59L', 'HCAR3', 'CCDC70', 'TMSB15A', 'SNORD114-14', 'WDR88', 'USP31', 'ANO1', 'PIGG', 'EBNA1BP2', 'DDC', 'ABCB6', 'PKNOX1', 'OR4F5', 'SNORD115-33', 'ZNF423', 'AP3M2', 'PAM', 'CAPN3', 'SCFD2', 'TAOK1', 'NICN1', 'LINC00909', 'COL1A1', 'BTBD7', 'C4ORF50', 'COG2', 'RPS6KL1', 'ANKRD30BL', 'SAA2', 'NFKBIB', 'PSAPL1', 'ZNF879', 'PEX12', 'SNRNP25', 'MED25', 'BCO2', 'GLRA2', 'STOX2', 'GLT1D1', 'C15ORF26', 'LTBP4', 'FCER1G', 'CDK11B', 'PRELP', 'WFIKKN1', 'RTN4', 'SPATA6L', 'TMEM35', 'FAM210A', 'FBXO7', 'WBP1L', 'POMK', 'PRR14L', 'CDSN', 'SPSB1', 'DNAJA3', 'RRP15', 'ADGRB3', 'TSACC', 'OR5AP2', 'HRC', 'SEC13', 'ICE2', 'IFNGR2', 'C10ORF11', 'COQ10A', 'KHNYN', 'DYNLRB2', 'NR5A2', 'SLC34A1', 'BRCC3', 'UBE2A', 'TMEM256', 'MICU2', 'SLC10A2', 'INAFM1', 'CXORF40A', 'SRXN1', 'IER2', 'E2F4', 'ZNF322P1', 'FOXE3', 'SRSF11', 'SEPT3', 'SCGB1D2', 'PAPL', 'LGALS9C', 'TPCN1', 'KLRB1', 'SS18L1', 'SPANXN4', 'CNKSR1', 'METTL12', 'PTK2B', 'SLC27A1', 'ZNF594', 'CDH15', 'PSMB4', 'CCSER1', 'C5AR2', 'LRFN1', 'TBC1D22B', 'PRICKLE2', 'ADAMTS14', 'ALPP', 'EYA1', 'MRPS31', 'ZBTB3', 'ZNF473', 'TOB2P1', 'TIGD6', 'FAM227A', 'LCE1F', 'WDR66', 'PLIN4', 'GPM6B', 'BCKDHB', 'APOPT1', 'KRTAP5-8', 'SLC35A4', 'C9ORF129', 'PRKAB2', 'NFIX', 'SLC36A3', 'HIP1', 'TBC1D2B', 'BEND3P3', 'MAP2K6', 'MTCH2', 'POC5', 'RUSC1', 'FGD3', 'BEGAIN', 'SBF2', 'PLEKHA8P1', 'SLC5A11', 'HOXA11-AS', 'PRAMEF6', 'TMEM249', 'RASSF5', 'EPPIN', 'SERINC4', 'KLHDC3', 'ZNF260', 'STC1', 'BLCAP', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.2072802580815156e-15 NRMSE: 7.257819781423307e-16 MAPE: 3.038324946557231e-12 Pearson Correlation: 0.1982457625844694 Spearman Correlation: 0.22213930348258712 Coefficient of Determination: -1.8179951770375888 RMSE: 0.3952130029389139 NRMSE: 0.30575988962904155 MAPE: 536.8983059422159 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: RandomForests Pearson Correlation: 0.5820844080530901 Spearman Correlation: 0.5764318054968172 Coefficient of Determination: 0.302723820419728 RMSE: 0.19935856197950705 NRMSE: 0.1198486022649163 MAPE: 483.0095189632728 Pearson Correlation: 0.2574070562106629 Spearman Correlation: 0.4398400156082334 Coefficient of Determination: 0.04815337308574463 RMSE: 0.22969132327835662 NRMSE: 0.17770263916441528 MAPE: 307.0111505387295 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['PSD', 'NFYC', 'TMIGD1', 'KHNYN', 'C1ORF131', 'FAM205BP', 'CLEC18B', 'CEL', 'KDM4A', 'HTR1B', 'HNRNPAB', 'KLHDC1', 'SGCA', 'CCDC54', 'NCOA5', 'RBSN', 'SNHG5', 'NUDC', 'RAD9A', 'TBC1D3P1-DHX40P1', 'SH2B3', 'ITGB2', 'AHNAK2', 'PARP15', 'IL15RA', 'IKZF1', 'ANKRD55', 'OPN4', 'FETUB', 'THRB', 'LGALS9C', 'SUN2', 'SOX10', 'HSP90AB2P', 'MGC16275', 'DEFB104A', 'VCPKMT', 'SNORD62A', 'FKBP6', 'STC2', 'CTNND2', 'OR6M1', 'VNN3', 'CYP2A7', 'CXORF38', 'SPTLC2', 'ACVR1', 'TTTY23', 'TMPRSS3', 'RFPL1S', 'RND2', 'SPAG6', 'TMEM59L', 'IGSF8', 'HPS3', 'ABO', 'ZFHX4-AS1', 'LOXL2', 'ANGPTL3', 'HLA-DRB1', 'PAICS', 'MICAL1', 'GGTA1P', 'PRIM2', 'PSRC1', 'GNPDA1', 'OR6V1', 'ADD1', 'MCU', 'ABCF3', 'SCN1B', 'ARMC12', 'EML2', 'CAV3', 'PDXK', 'RRP1B', 'PPIG', 'CLDN11', 'ODF3', 'GTF2IRD1', 'SNORA44', 'HCRTR2', 'KLRF1', 'EMC6', 'CPNE1', 'CMPK1', 'DLL1', 'FAM201A', 'CGB', 'OR6S1', 'PSKH1', 'MYT1', 'HIST2H3C', 'PGK1', 'NQO1', 'HDAC10', 'TRA2B', 'PSMA6', 'ABHD15', 'ZXDB', 'PRAP1', 'CNNM2', 'TRIM8', 'TSPAN32', 'CCDC71', 'CHSY1', 'PLEKHG3', 'NR1I3', 'RNF10', 'PTGS1', 'TFEB', 'DTWD2', 'GRB2', 'EVA1B', 'ARL17A', 'NHLRC1', 'RPS3', 'TMTC2', 'LINC00301', 'ETFA', 'TBC1D3P2', 'HPGDS', 'ZNF44', 'RIIAD1', 'SLC1A3', 'SLC35F1', 'GSTM2', 'ZRANB2', 'TMOD3', 'SULT6B1', 'DHODH', 'ZNF805', 'EME1', 'XKR8', 'USP5', 'CLIP2', 'THAP8', 'RSPH3', 'SNORA16B', 'SNORD91A', 'RC3H2', 'CFHR4', 'GPBAR1', 'IQSEC3', 'USP3', 'DOK5', 'LRBA', 'PARK2', 'IARS', 'TNFRSF10A', 'RAB10', 'MPZ', 'C14ORF132', 'LRCH3', 'ASB16', 'HYAL1', 'PARVA', 'APITD1', 'CHGA', 'ANAPC16', 'CUL5', 'TSHR', 'FAM167A', 'OR8D4', 'ADSL', 'TTTY10', 'RNF214', 'STAM', 'TARP', 'MANEAL', 'CBL', 'MAN1A2', 'KIAA1522', 'LOC153910', 'TRIM69', 'OR5B12', 'SLAMF9', 'HNRNPH2', 'DSCAM', 'AKR1D1', 'FBXO43', 'TMEM102', 'CACNA1E', 'TRDN', 'ZNF793', 'PUS7L', 'LNX2', 'CACTIN', 'SNORD114-3', 'DOC2B', 'METAP2', 'MROH1', 'IL36G', 'LINC00265', 'RASSF4', 'KCTD17', 'PADI1', 'INPP5A', 'DSCC1', 'AK2', 'ENTPD8', 'PMPCA', 'POU2AF1', 'KRT28', 'MCM3', 'SH3PXD2A', 'PHACTR3', 'ARMC8', 'DMP1', 'SCFD1', 'CYMP', 'SPAG7', 'DLG5-AS1', 'DYNLL2', 'CCAR1', 'ZDHHC12', 'SLC22A9', 'ZNF32', 'GMDS', 'ARHGAP33', 'URAHP', 'MATK', 'FAM173A', 'ZNF511', 'ZNF320', 'ANKRD18DP', 'PLRG1', 'MASP1', 'MSGN1', 'LOC729603', 'VAMP1', 'ZNF331', 'RNF112', 'C9ORF91', 'SLCO2A1', 'OSGIN1', 'IFT22', 'ZBED4', 'C1ORF226', 'MKRN1', 'PGBD4', 'TRIM67', 'PLCG2', 'PRKRIR', 'LINC00635', 'CYP26C1', 'FAM120AOS', 'WDR34', 'ALOX15', 'HOMER3', 'ELOVL1', 'KDM5B', 'TMTC4', 'ERBB3', 'C3ORF67', 'SP9', 'WIPF3', 'TMEM248', 'IFNB1', 'FAM81A', 'ADAD1', 'MAX', 'GRIA1', 'TTC21A', 'ATP1A1-AS1', 'VWA5B1', 'CDH1', 'HS3ST2', 'BIRC7', 'NME3', 'LOC728554', 'RSRC2', 'TRIP12', 'HMGB4', 'ZNF74', 'ATG16L1', 'C1ORF228', 'TBC1D14', 'CCDC186', 'MUL1', 'ZSWIM1', 'NEIL3', 'CDCA7L', 'MEAF6', 'KIF1C', 'PHF2P1', 'C12ORF50', 'KAT2B', 'VILL', 'ZFYVE9', 'SBK1', 'PAPD7', 'SCARNA4', 'FAU', 'CSRP2BP', 'MAPT-IT1', 'SYBU', 'PRDM8', 'TSNAXIP1', 'VASH1', 'XCL2', 'IL10RB', 'CYP3A43', 'OR1J1', 'GALNT4', 'DFNA5', 'CLCN7', 'TAAR5', 'NHLRC4', 'DPM2', 'ZIM2', 'RBM19', 'FUS', 'NRGN', 'PLAC9', 'TMEM263', 'UBE2MP1', 'ALDH3B2', 'PABPC5', 'MMD', 'KCNK13', 'WIPI1', 'MCM3AP', 'MRPL30', 'EIF3G', 'CHRNA10', 'MTSS1', 'HCG27', 'SNORD69', 'PSMA5', 'ACAP2', 'RHOV', 'THEM4', 'HEG1', 'XKR4', 'CLEC17A', 'POLE4', 'ADGRF3', 'EFTUD2', 'CTSF', 'NCAPD3', 'ADAM11', 'MC4R', 'TIGD4', 'HLA-DQB1', 'FOXQ1', 'RAB11FIP5', 'RPL18', 'RNF215', 'LOC606724', 'CNKSR3', 'MFSD8', 'FAM103A1', 'ARGFXP2', 'SGCB', 'FAM3B', 'UGT2A1', 'UCMA', 'CEACAM1', 'SLC38A8', 'HIST1H3D', 'IMMP2L', 'B4GALNT4', 'LSMEM2', 'USP27X', 'CYP2E1', 'HSD17B10', 'SSR2', 'DSC2', 'C11ORF58', 'DPY19L2P2', 'SPAG16', 'TXNDC9', 'SLC10A1', 'PARN', 'DNAJB6', 'S100A14', 'ANXA4', 'SNORD18A', 'SNCAIP', 'CRLF1', 'NIM1K', 'EBF4', 'MEX3A', 'MFGE8', 'MLXIP', 'DLG4', 'RSPO4', 'STAP2', 'GLI2', 'IL11', 'PAPSS2', 'SLC13A5', 'NKAP', 'TET1', 'ARNT2', 'KATNAL1', 'RNF141', 'PCSK7', 'CCDC18', 'TPCN1', 'MYOF', 'EVX2', 'XPA', 'KANK2', 'DBP', 'CRIPAK', 'ABHD16A', 'CNTNAP1', 'TOMM70A', 'MSH5', 'NLRC4', 'NMNAT1', 'LINC01312', 'SERP2', 'RPS5', 'RASSF6', 'CCL3L1', 'UBXN4', 'NTF4', 'SSX3', 'SETX', 'ATP11A', 'APMAP', 'GPR17', 'BRD8', 'TIAL1', 'OR8B3', 'GPR18', 'SSX4', 'ZSCAN32', 'TMC1', 'CST1', 'PRSS21', 'DNAJC3', 'LOC100240735', 'SMR3A', 'SHANK3', 'SMN2', 'CCDC170', 'OLIG3', 'RNF121', 'BAZ1B', 'NTRK2', 'INSRR', 'TLN2', 'VPS13A', 'SNORD88A', 'CCR10', 'PPP1R1A', 'CA14', 'NAA60', 'PPFIBP1', 'SERPINB6', 'EMX1', 'MAFG-AS1', 'MAGEA6', 'RAP1GAP', 'ARL8A', 'GUCA2A', 'MICALL2', 'PRLH', 'C14ORF166', 'POM121L2', 'DNAJC5G', 'RENBP', 'RNF207', 'C7', 'ZNF596', 'AFMID', 'RASSF2', 'KRTAP5-4', 'MLLT6', 'LRP1', 'TMEM138', 'CTAGE6', 'CNTN6', 'DCUN1D5', 'FBP2', 'DUSP11', 'PLET1', 'SOX14', 'PHLDB1', 'TRIM16', 'SNORA45B', 'DEFB116', 'PLCD1', 'ESRG', 'RTN4', 'SPAST', 'FAM155B', 'SGK2', 'PCDHGA7', 'MBLAC1', 'CLK3', 'ZFYVE27', 'RPS12', 'CGA', 'SDC2', 'MAP3K14', 'OR5AP2', 'HOMER1', 'MAST1', 'TFF1', 'DDOST', 'LINC00667', 'ZSWIM6', 'THAP7-AS1', 'ENPP5', 'PTGDS', 'CLASP2', 'NOX5', 'IL24', 'FAM196B', 'NTM', 'ACBD7', 'MYLK', 'ITFG3', 'HINT3', 'P2RY1', 'SLC27A1', 'CRELD1', 'DNAH5', 'MGAM2', 'ALDH3A1', 'SIX3', 'SDHAF1', 'NYAP1', 'HAL', 'SDHAF4', 'ESRRA', 'KCTD14', 'SPATA31E1', 'TOPAZ1', 'H2AFJ', 'SIX6', 'GZMH', 'C14ORF93', 'LILRB4', 'DALRD3', 'PHF10', 'TADA3', 'PDE1B', 'TCF4', 'SNORA81', 'C7ORF50', 'NECAB1', 'HRCT1', 'SLC26A10', 'EIF2AK1', 'SNORA5B', 'GRK7', 'KIAA1324', 'TXLNB', 'ZPLD1', 'ZP4', 'ZFAND6', 'FRG2B', 'TNK1', 'CLTC', 'VDR', 'ALDH1A3', 'SP6', 'RASAL2-AS1', 'SOX21', 'ZNF213', 'CLIC1', 'WAS', 'TTC39B', 'PDE5A', 'IGFBP3', 'OR52M1', 'SNORD50A', 'RPP40', 'MAP3K9', 'ZNF212', 'CDH12', 'PINX1', 'RPL34-AS1', 'FSD1L', 'PID1', 'KLHL5', 'UBTFL1', 'C1ORF123', 'RSBN1L', 'ATPAF1', 'ALKBH5', 'CYB561D2', 'OLFM1', 'CASQ1', 'FCGR1C', 'HIST2H3D', 'MXRA8', 'ZNF252P-AS1', 'HIGD1A', 'ZDHHC13', 'FAM169B', 'HBA1', 'HIPK4', 'NETO1', 'CBFA2T2', 'RSRP1', 'C20ORF27', 'CCL28', 'CYB5A', 'TINF2', 'SLC27A4', 'SNORA37', 'CDRT1', 'CAMK1G', 'TNC', 'ZNF648', 'SMAD2', 'DMRT1', 'ASMTL-AS1', 'CTU2', 'OR14A16', 'SNORA57', 'LGALS9', 'LUZP2', 'LOC652276', 'NPIPB5', 'LRRC47', 'ZNF639', 'MLLT4-AS1', 'MRPL11', 'MRPL53', 'MYEOV2', 'SMCO2', 'ALS2CR12', 'LOC388242', 'FOXL1', 'CCNG2', 'C19ORF54', 'COG7', 'MYO19', 'NOP58', 'ZNF311', 'EIF1', 'PGBD2', 'LINC00473', 'DPH6', 'ZNF502', 'HCP5', 'BPIFC', 'ZNF536', 'RUNDC3A', 'KIRREL3', 'ATP6V1E1', 'GAPDH', 'EMG1', 'CHIC1', 'SPG7', 'C12ORF71', 'UBE2U', 'FKBP4', 'PRR5-ARHGAP8', 'KIAA1107', 'SMPDL3A', 'OR52L1', 'ADAM12', 'SSH2', 'LINC00244', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 3.7968617089190645e-15 NRMSE: 6.813814239935151e-16 MAPE: 3.0004188924120885e-12 Pearson Correlation: 0.5659994053261773 Spearman Correlation: 0.3556921275973076 Coefficient of Determination: -0.8010630077358871 RMSE: 1.4188035439287228 NRMSE: 0.2417165347340959 MAPE: 7543.465293212436 Predictor: ElasticNet Pearson Correlation: 0.7431738943365711 Spearman Correlation: 0.6123517419907445 Coefficient of Determination: 0.2685851074933451 RMSE: 0.8406965631476824 NRMSE: 0.15087065720576465 MAPE: 371.1547805116471 Pearson Correlation: 0.6747214315573921 Spearman Correlation: 0.4727441225246318 Coefficient of Determination: 0.21427026408317007 RMSE: 0.9371182725242986 NRMSE: 0.15965352105291558 MAPE: 2199.375382116275 Predictor: RandomForests Pearson Correlation: 0.8496912996533781 Spearman Correlation: 0.6823590142072664 Coefficient of Determination: 0.7186309178089647 RMSE: 0.5214294539882203 NRMSE: 0.09357526586655784 MAPE: 275.48269524432374 Pearson Correlation: 0.7966174488104577 Spearman Correlation: 0.5185483392884032 Coefficient of Determination: 0.611759347624431 RMSE: 0.6587313239654206 NRMSE: 0.1122257226034415 MAPE: 1421.1570282508299 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['ST3GAL2', 'CXCL16', 'OR51I1', 'EIF1AY', 'IARS2', 'SCARNA22', 'LIPH', 'PWRN1', 'MT2A', 'SLC1A1', 'OPN1SW', 'XXYLT1', 'SMAP1', 'MDC1', 'MARK2', 'SPATA31A5', 'PSMD10', 'TTC36', 'PRR14', 'SNAI2', 'CDC73', 'ZNF71', 'KIFAP3', 'CLVS1', 'HSBP1L1', 'LINC00663', 'P3H1', 'ATP5H', 'BPIFB1', 'DEFB109P1', 'MAP1LC3B', 'DOCK6', 'AGFG1', 'DOCK2', 'PPP1R14D', 'SUPV3L1', 'ATP6V1C1', 'UNC5CL', 'COL5A1', 'TMIE', 'DTX2P1-UPK3BP1-PMS2P11', 'KCNQ2', 'SUSD5', 'MFI2', 'PHYHIP', 'PILRA', 'OPN4', 'SAAL1', 'ICAM3', 'ERCC8', 'TRMT10A', 'IGF2-AS', 'ASB14', 'SNORD115-41', 'LPL', 'FAM210B', 'BOC', 'PCP4', 'STEAP2', 'FER1L4', 'RPS27A', 'NKIRAS1', 'APLNR', 'WDR86', 'TMEM169', 'DDX46', 'GAGE12J', 'TAGLN3', 'SUPT7L', 'PRNP', 'UCKL1-AS1', 'HKDC1', 'CNNM2', 'NLRP11', 'AICDA', 'MAP10', 'LINC01098', 'YWHAH', 'ELMOD1', 'YWHAG', 'PRKCDBP', 'FGF8', 'GAD2', 'ZG16', 'SLC26A8', 'KEL', 'ZMAT4', 'HSD17B7P2', 'HYAL3', 'SRR', 'TAF4B', 'METTL24', 'MCM4', 'MED30', 'WHAMM', 'FAM155B', 'RAB41', 'NEFL', 'FOXD3', 'CYP4Z1', 'CHN2', 'KIAA1614', 'BBS7', 'NME2', 'RYBP', 'TMEM126B', 'GXYLT2', 'BATF', 'SNPH', 'SCN4B', 'PLCD3', 'SLC12A9', 'AXIN2', 'ZNF526', 'CYP2B7P', 'GYS1', 'RBP2', 'PTDSS2', 'PYCARD', 'LOC284661', 'HDX', 'ANXA4', 'AGPAT5', 'CSF2RB', 'SLC1A4', 'CAPN11', 'NBPF1', 'RNF31', 'ADAM12', 'SOX11', 'IPO8', 'SALL1', 'ACSBG1', 'LCE4A', 'COMMD3', 'AMTN', 'ZNF646', 'SYNE1', 'MRPS12', 'STK38L', 'NUP88', 'NXF1', 'DEF8', 'ABHD16B', 'ODAM', 'NMB', 'PYCRL', 'MFSD6', 'C14ORF1', 'MRC1', 'VSIG10', 'PIP5K1B', 'FUOM', 'LDB1', 'ABCG1', 'STAU2', 'SCAND1', 'POLD4', 'NAALAD2', 'KLK6', 'CD19', 'SLC35B4', 'ZNF814', 'STEAP1', 'LIMD1', 'ZNHIT1', 'LYAR', 'LINC00320', 'RBM48', 'CACNA1H', 'CLUH', 'NLGN1', 'MMAB', 'SNORD94', 'PATE1', 'ZNF43', 'DDX6', 'SLC35F2', 'IDH1', 'NRIP3', 'ACPT', 'NYAP1', 'CDS2', 'DEFB128', 'TMEM43', 'MEGF9', 'LRRC17', 'TDRD7', 'PARP3', 'NCOR2', 'CABP4', 'SLC22A23', 'TMEM2', 'TMSB15A', 'LOC100133669', 'HHLA1', 'BTNL3', 'SLC4A1AP', 'FAM171A1', 'MROH6', 'ZNF282', 'CCAR2', 'RBFOX2', 'COPS5', 'HELZ2', 'ADCY3', 'HADHA', 'SHB', 'PSMD9', 'NIPSNAP3A', 'PRM3', 'MCU', 'LINC00473', 'ALPI', 'GNGT1', 'MIB1', 'ELFN1', 'CDC26', 'SDCBP', 'PTPRC', 'PRDX1', 'WHSC1L1', 'ZSCAN5A', 'SNHG4', 'GPR63', 'METTL22', 'ATP6V0C', 'CTSL3P', 'ZNF644', 'DSCR4', 'TRIM37', 'USP38', 'CYP2E1', 'SYT3', 'ALKBH8', 'ANKZF1', 'UNK', 'DEDD', 'KHDRBS2', 'GALNT14', 'SCCPDH', 'ZNF738', 'CLEC3B', 'SCARNA14', 'KHSRP', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.7565774429073765 Spearman Correlation: 0.7453153085905839 Coefficient of Determination: 0.5715678971854685 RMSE: 0.2913606195523348 NRMSE: 0.07862986869474986 MAPE: 188.27846964326142 Pearson Correlation: 0.11193051705634666 Spearman Correlation: 0.14076675446297923 Coefficient of Determination: -0.5824444466042156 RMSE: 0.6513369582469839 NRMSE: 0.2403821088234692 MAPE: 466.7617930852834 Predictor: ElasticNet Pearson Correlation: 0.4400847001587005 Spearman Correlation: 0.4712666028528487 Coefficient of Determination: 0.05279672811427605 RMSE: 0.4332229386811564 NRMSE: 0.11691443694893129 MAPE: 208.26793786110264 Pearson Correlation: 0.3687895957514408 Spearman Correlation: 0.4302214418105551 Coefficient of Determination: 0.041762706025310514 RMSE: 0.5068483301645115 NRMSE: 0.18705720428718423 MAPE: 284.6391271841487 Predictor: RandomForests Pearson Correlation: 0.5809108474124952 Spearman Correlation: 0.5725043762005265 Coefficient of Determination: 0.310582493710552 RMSE: 0.3695991832250479 NRMSE: 0.09974421145631943 MAPE: 200.17538267293938 Pearson Correlation: 0.4265819676927463 Spearman Correlation: 0.4941066581486213 Coefficient of Determination: 0.17077135635604035 RMSE: 0.4714966734715608 NRMSE: 0.17401033863852494 MAPE: 352.01156324708876 Fold: 3 Protein: RB1 x_train_column_count: 371 x_train columns: ['PRAMEF4', 'INS-IGF2', 'DNAH17', 'RGSL1', 'FAM153B', 'B4GALT5', 'OPN4', 'HIST1H1A', 'PYGO2', 'DDX46', 'CUL3', 'AMPD2', 'ACAD9', 'HKR1', 'TMEM50B', 'PLIN5', 'CYLC2', 'KLRC2', 'MMP7', 'GPN2', 'CYB5D2', 'VPS35', 'B4GALT1', 'SNORD116-25', 'NCR3', 'LOC493754', 'STRN3', 'ENG', 'PAQR3', 'HES2', 'ZNF208', 'LINC00599', 'HYAL1', 'ITGA2', 'RASSF4', 'CD55', 'WDR86', 'FAM99A', 'GTF2IRD1', 'A1CF', 'CPSF2', 'BNIPL', 'LOC100129935', 'SSBP4', 'PPAP2B', 'GYG1', 'HRG', 'NEUROG2', 'DAPP1', 'MCTS1', 'VBP1', 'ZMYND15', 'SCARNA15', 'KLF15', 'SNORD115-25', 'LEPROT', 'ZNHIT1', 'GGTLC1', 'BTBD16', 'TAS2R10', 'RNASE2', 'CT45A2', 'KDM3A', 'OR2D2', 'TARBP1', 'MSANTD1', 'PIGG', 'ADGRG5', 'SAPCD1', 'METTL6', 'SYNGR3', 'KIAA1715', 'ANGPTL7', 'RPL15', 'FSD2', 'GNS', 'GALNT3', 'FYN', 'DUXA', 'CYP46A1', 'C16ORF92', 'GRIK1-AS1', 'NLRP4', 'PRDM1', 'CAB39L', 'TEX13A', 'SDK1', 'SAMM50', 'SLC6A8', 'RASL10B', 'RNF103', 'DAD1P1', 'CEBPZ', 'SIGLEC10', 'SSFA2', 'BNC1', 'SUCLA2', 'OR5D18', 'PBDC1', 'IL12RB1', 'C19ORF80', 'OR13G1', 'ALOX5', 'PAK6', 'IFI30', 'KLHL4', 'SOST', 'WIPI1', 'SLC18B1', 'SNORA81', 'A2ML1', 'OR2B11', 'CCDC91', 'ALDH1L2', 'ABCC9', 'RDH14', 'SNORD116-23', 'SYT12', 'OR3A1', 'TGM7', 'KCNK13', 'USP45', 'RXFP1', 'FTHL17', 'ASCL3', 'TVP23B', 'TM2D2', 'LRRC37A', 'POLL', 'MRPL50', 'ABCA12', 'SOX8', 'MXRA5', 'ZNF337', 'HNRNPA3', 'PCED1A', 'SLC6A2', 'HPYR1', 'NEFH', 'MED29', 'RAB3C', 'DNAH11', 'UHMK1', 'EFNA2', 'XKRX', 'POTEM', 'PCDHB17P', 'PAQR9', 'LOC285847', 'ZNF845', 'BRSK2', 'RPL32', 'IARS2', 'TRIML2', 'BOP1', 'ZNF221', 'PRSS3', 'TMCO4', 'HIST1H2AJ', 'LAMA5', 'INTS12', 'PKHD1L1', 'SGOL2', 'RNY4', 'ZNF609', 'CYP1B1', 'WDR90', 'EBAG9', 'FIBP', 'ZSWIM6', 'CMTM5', 'SH3PXD2A', 'ATXN10', 'BCAR3', 'MAP3K10', 'KIAA0556', 'ARSH', 'CKLF', 'OR9A2', 'ATP13A5', 'HBA2', 'C17ORF89', 'AKAP14', 'TMED6', 'SPCS2', 'FAH', 'KRT14', 'FBXO16', 'PSMB6', 'CCL4L1', 'KRT222', 'PER1', 'FOXA1', 'SORCS1', 'DAZ4', 'OR4F17', 'MUC13', 'MRPS18B', 'PCNXL3', 'CLDN18', 'GPR37', 'CCL19', 'RFPL3S', 'LRRC3', 'FOXE1', 'DHCR7', 'UGT2B28', 'PLOD3', 'TAS2R7', 'RP1', 'RTN4RL2', 'ANPEP', 'KLHDC4', 'CAPRIN1', 'TIFA', 'SCARNA9L', 'VTI1A', 'FAM157B', 'MYO1C', 'RABL2B', 'ERICH3', 'DDX27', 'NKIRAS1', 'PHKB', 'CECR5', 'TWISTNB', 'DNM1L', 'XRCC6BP1', 'LRRC57', 'PPP1R36', 'CYBRD1', 'SSX2IP', 'HIST1H2BH', 'RBBP8NL', 'CCDC50', 'CABIN1', 'NUP133', 'UFSP2', 'RASA2', 'MAL', 'COL23A1', 'NOL4', 'TMEM235', 'GPR143', 'CCDC69', 'PHLDA2', 'MIER1', 'GFOD2', 'CDC20B', 'NDUFB6', 'THBS2', 'USP43', 'ANKRD28', 'PNPT1', 'CT45A5', 'SAV1', 'GP5', 'SPTSSB', 'TBCE', 'TAF1C', 'CACNB2', 'FAM169B', 'CYP1B1-AS1', 'ZNF584', 'C4ORF33', 'NEK1', 'SNRPD2', 'RPL8', 'DUSP9', 'PMS2P5', 'HPD', 'PIK3CG', 'SLC28A2', 'SYPL2', 'HMMR', 'TRIT1', 'GEMIN7', 'OR6A2', 'ADTRP', 'B4GALT2', 'MFSD4', 'REC114', 'SLC25A12', 'DMWD', 'C18ORF8', 'ANKAR', 'WASH2P', 'RANBP10', 'BEND3', 'TTC29', 'CXORF40B', 'SYNGR1', 'HSPA5', 'PTPN5', 'TMEM176B', 'EVI5', 'ZNF385D', 'VWCE', 'KAT2B', 'PLK1', 'ZNF34', 'VPS33B', 'MAL2', 'ODF4', 'UBXN1', 'C16ORF52', 'ATAD3C', 'FGF20', 'ARHGAP44', 'GCC2', 'DNAJC6', 'KCNIP4', 'SPP1', 'TXLNB', 'DDX28', 'CYP21A2', 'ASF1B', 'EXOC3L4', 'ZW10', 'CLSTN2', 'INF2', 'ZMAT5', 'LYZL4', 'OR4B1', 'CALCA', 'ZNF79', 'ADCY9', 'SLC5A7', 'INO80C', 'SLC5A6', 'XKR8', 'ZNF570', 'TBC1D14', 'DOCK2', 'HAVCR2', 'PLCB3', 'NUDT16L1', 'SLCO2B1', 'HIST1H4J', 'UBA2', 'HK2', 'MLH1', 'MAATS1', 'DUSP16', 'CACNA1S', 'ARHGEF9', 'IRF2', 'MYO1D', 'BPIFA4P', 'EPHB3', 'HIST1H4K', 'LRRC3B', 'NHLH2', 'TGOLN2', 'ISG15', 'C1RL-AS1', 'XKR4', 'SAA3P', 'HDHD1', 'NBN', 'MAPRE1', 'LPGAT1', 'AMER2', 'ATP8A1', 'FLJ25758', 'GRXCR1', 'IPO5', 'ZNF502', 'NCL', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.8286243478510258 Spearman Correlation: 0.7519691936956672 Coefficient of Determination: 0.6866183049539722 RMSE: 0.1346785402615293 NRMSE: 0.04925341583584308 MAPE: 398.4984104520418 Pearson Correlation: -0.004581507368760401 Spearman Correlation: -0.018356837367049468 Coefficient of Determination: -2.5943342113650294 RMSE: 0.42024881106253814 NRMSE: 0.2948824754498071 MAPE: 1472.922864500227 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: RandomForests Pearson Correlation: 0.6264160222948542 Spearman Correlation: 0.4953277970749792 Coefficient of Determination: 0.18054099061043016 RMSE: 0.21778361635417073 NRMSE: 0.07964585150459726 MAPE: 173.77090666250686 Pearson Correlation: 0.32436728377144824 Spearman Correlation: 0.32567238993004904 Coefficient of Determination: 0.029794110355617076 RMSE: 0.21833794504484103 NRMSE: 0.15320455888182286 MAPE: 154.14500571181964 Protein: CDH1 x_train_column_count: 836 x_train columns: ['TM9SF1', 'PPP1R3E', 'SNX4', 'ARHGAP5-AS1', 'LEMD2', 'PROCR', 'BRAF', 'PTGER3', 'ZFY', 'SNORD38A', 'CYP1B1', 'FMN1', 'IGLL1', 'ATP1B1', 'VILL', 'E2F5', 'GLOD5', 'HGSNAT', 'LYRM1', 'VWF', 'EIF2B2', 'SOX17', 'RPUSD4', 'GBF1', 'FCHSD2', 'HIST1H3D', 'C3ORF79', 'E2F6', 'CYBB', 'BRINP2', 'DLK2', 'C20ORF195', 'TAT', 'SRSF5', 'TRIP11', 'TAGLN2', 'CYP2B7P', 'RAP1B', 'ADGRG5', 'COLQ', 'C9ORF78', 'OR2A25', 'MEFV', 'ARX', 'MYLK', 'CLCA3P', 'ATF7IP', 'CSGALNACT2', 'C16ORF54', 'GALE', 'ABHD12B', 'CCNT1', 'TMEM50A', 'CCDC74B', 'ASTN1', 'LINS', 'CAP1', 'CCL20', 'MYO1D', 'C7ORF73', 'TAP2', 'PEBP1', 'SV2C', 'GEN1', 'ADA', 'NCF1', 'ASIC4', 'AIFM2', 'DGCR11', 'TAF6', 'MRPL28', 'NPTX2', 'PRR23C', 'C17ORF82', 'BPIFB6', 'SULT2B1', 'C17ORF97', 'FAM155A', 'GIPC1', 'LINC01098', 'VWA5B1', 'ZNF446', 'ZNF280B', 'LGALS9C', 'FGF16', 'SPTLC3', 'PHF12', 'USH2A', 'ARMC1', 'SLC26A3', 'C2ORF48', 'ZFYVE16', 'SUMO1P1', 'RAB2B', 'SIGLECL1', 'LINC00602', 'COL27A1', 'ANPEP', 'DGKQ', 'AQP3', 'GP1BA', 'SNORD116-23', 'CCDC54', 'EPHA4', 'PARD6G', 'SLC16A14', 'CYB5B', 'DOC2B', 'TCEAL3', 'GSPT1', 'OR51G2', 'FAM98C', 'ANKS4B', 'RGS10', 'GPR141', 'ASB16-AS1', 'TMEM163', 'PCNA', 'PRSS48', 'SNHG12', 'GABRB2', 'PMS2CL', 'BZRAP1', 'SI', 'LPCAT2', 'PRRC1', 'HECW2', 'RHBDD1', 'TYROBP', 'PRKAR1B', 'ZNF462', 'TP73', 'TXNL4B', 'GPER1', 'TIMD4', 'NEUROD2', 'CEP162', 'SNORD68', 'OSBPL10', 'PRDX3', 'BTLA', 'GRK6', 'GHRLOS', 'CD209', 'HGH1', 'RNPS1', 'LCN12', 'NBEAL2', 'ZNF594', 'SPACA1', 'IL2RB', 'RBP7', 'ZNF571', 'WASH7P', 'PTPN11', 'HAR1A', 'THUMPD3-AS1', 'SEMA4C', 'CCDC121', 'LBP', 'CNFN', 'PPP3CC', 'CRSP8P', 'SKIV2L', 'GNE', 'ANAPC4', 'TBX15', 'TOMM40L', 'PSORS1C1', 'SPATA2', 'CPEB2', 'THAP10', 'OR6C70', 'CALB2', 'LOC399815', 'EXOSC8', 'CNTNAP3', 'KLC4', 'IDH3B', 'SNTB1', 'RBMY1A3P', 'PPP2R3B', 'TMEM248', 'PTGR1', 'KRT37', 'LDOC1', 'BIRC3', 'SCFD1', 'LRWD1', 'NIPA2', 'NXNL2', 'SSBP1', 'WDR91', 'TNNI3K', 'KCNJ8', 'TRANK1', 'ARHGEF26', 'AGPAT9', 'ALDH16A1', 'ZCCHC10', 'NUP54', 'TMEM200C', 'SELK', 'SNORA52', 'GLRX3', 'SENP3', 'NDUFB9', 'PIAS1', 'PPAT', 'ZNF280A', 'SBSN', 'EPG5', 'MTERF4', 'RNF165', 'CST13P', 'SCRN2', 'TSPAN18', 'TBCK', 'KRTAP17-1', 'OR8I2', 'SGCZ', 'POLR1C', 'ENAH', 'LOC100132287', 'SNORD45B', 'DHX57', 'LOC100129935', 'ATP6V1G1', 'SLC44A5', 'RPS26', 'FAM179B', 'AGMAT', 'ZNF350', 'INSL5', 'GYS1', 'PPP2R5E', 'SUSD6', 'OR4C13', 'FAM102B', 'CEL', 'NUP85', 'KIAA1919', 'KIAA0020', 'IL21', 'ZNF207', 'COL11A1', 'ZNF638', 'MEIS2', 'ABCB5', 'C12ORF57', 'FOXL2NB', 'PURA', 'TAS2R46', 'VGF', 'TMEM55A', 'CRLF1', 'NUTM2A-AS1', 'LY86', 'COL6A4P1', 'LIN52', 'EPHB3', 'DHRS4-AS1', 'CHD1', 'DHH', 'ENO3', 'SAMM50', 'GAD2', 'SRP54', 'ZBTB1', 'IQSEC3', 'RPS6KA6', 'OIP5-AS1', 'BCO1', 'CAPN5', 'DUSP21', 'MRPL3', 'DPH7', 'DTHD1', 'PCDH17', 'DNAH5', 'PRIMPOL', 'ACAA2', 'RASSF2', 'CUL5', 'PCGEM1', 'TTTY11', 'BAZ2B', 'NCLN', 'ARHGEF18', 'DENND1B', 'AGT', 'ALDOA', 'GGT8P', 'KCMF1', 'CXXC5', 'SLC10A5', 'USP34', 'MARCH4', 'MAB21L3', 'STEAP1B', 'MTMR6', 'NEK2', 'SSTR4', 'NCBP1', 'ZBTB34', 'LRAT', 'DAW1', 'ZNF160', 'DLX6-AS1', 'PKIA', 'PAX6', 'PHGR1', 'ARHGAP11A', 'ATG7', 'LRRC37BP1', 'LEAP2', 'C9ORF142', 'ZNF415', 'RPRM', 'PAQR4', 'WDR93', 'ZNF280C', 'STEAP2', 'EPS15', 'SH3BP2', 'IFI6', 'PKLR', 'CDH19', 'SNORA65', 'KRT73', 'STAT6', 'KDM5A', 'SLC32A1', 'THAP5', 'MXRA7', 'FAM86JP', 'ALDH9A1', 'TGS1', 'FAM74A1', 'ZNF530', 'SPATA8', 'NPLOC4', 'GPR87', 'CHN1', 'TIMM8B', 'DOK5', 'BBS7', 'EIF6', 'TTL', 'SLC36A4', 'PRF1', 'ABRA', 'UBXN2A', 'EIF1AX', 'EIF2B4', 'MRPL1', 'GTF2H1', 'ABCG5', 'IGF2BP2', 'SEPT9', 'CSDE1', 'RFPL4B', 'AQP12B', 'MED25', 'AQP2', 'USP38', 'SDHAF3', 'ADD1', 'KIF26B', 'ATAT1', 'STAT3', 'ASB11', 'SEC23B', 'HERC1', 'IFNA13', 'HTN1', 'ZNF680', 'CYTIP', 'PIGO', 'BCL10', 'LDB1', 'MXRA8', 'METTL7A', 'GRM7', 'TCF19', 'PTGFR', 'ARSB', 'RAB15', 'ROS1', 'OIP5', 'ALPPL2', 'MAGI2', 'JMJD1C', 'FCHO2', 'SLC25A42', 'SERINC4', 'DICER1-AS1', 'BCL9L', 'COPS5', 'KRT80', 'CAV3', 'GGT3P', 'FHDC1', 'SH2D7', 'BCORP1', 'PDLIM5', 'ARSG', 'H1FX', 'DYTN', 'ZFP30', 'LOC100130331', 'NOL4', 'ATP5G1', 'LTBP2', 'CLDN7', 'ZNF587', 'ASB6', 'MAVS', 'DDT', 'COL1A2', 'HHIPL2', 'WFDC2', 'ZBBX', 'SCN1A', 'NIPAL4', 'SEPT2', 'RFT1', 'PFN4', 'OR52K2', 'RAB3A', 'H2AFX', 'LINC01128', 'COMMD5', 'EML4', 'MAGEA6', 'C2ORF50', 'COX19', 'EXOC5', 'TRIM13', 'CAPNS2', 'CNTN6', 'SNAP23', 'TCTA', 'HRASLS', 'UNC93A', 'REEP5', 'TDRD1', 'SNORD121A', 'HES5', 'MAP3K13', 'GNPDA1', 'VDAC3', 'FBXO6', 'TRAF4', 'RASSF8', 'TRIM66', 'C7ORF69', 'AOX1', 'GATS', 'THRSP', 'ARNT', 'AKAP3', 'CCNA2', 'SLC2A11', 'GSKIP', 'GSTM2P1', 'AMBRA1', 'SNORD123', 'FARP2', 'PTK6', 'SNX6', 'SVIL', 'TPD52', 'SH2D1A', 'MATN1', 'PLD5', 'SPAG11A', 'PTPN9', 'LDAH', 'MFN1', 'ADCK2', 'SNORD49A', 'MEOX2', 'TMEM167B', 'EVA1A', 'GPR52', 'SNORD1A', 'TTTY17B', 'CX3CL1', 'DOCK10', 'MTA3', 'SDF2', 'EMB', 'SFT2D3', 'SESN1', 'SMYD1', 'CLCN4', 'LRP12', 'WFDC11', 'SOX5', 'SLC25A14', 'ARHGAP1', 'SPATA25', 'ZNF781', 'STC2', 'PXDN', 'KIAA0226L', 'SYN3', 'TBCE', 'LILRA5', 'ABCA2', 'RNF19A', 'RSPH3', 'AATBC', 'ARID2', 'TPM1', 'ABHD2', 'C10ORF105', 'SNORD115-17', 'TRIP12', 'GSS', 'LOC344967', 'ZNF527', 'SLC26A11', 'KIF3C', 'HEG1', 'CLTCL1', 'RASGRF1', 'CLU', 'CCDC38', 'SLC26A4', 'CKM', 'THNSL1', 'XYLT2', 'CD3E', 'IKZF5', 'PCSK6', 'IGFBP2', 'ACOT1', 'SPPL3', 'SNX25', 'UNC13D', 'GSTO1', 'MRPS22', 'TBC1D3P2', 'KANSL2', 'ARRDC4', 'C16ORF46', 'KANSL1', 'APBA2', 'DIO3', 'GSTT1', 'LOC284578', 'ARHGAP35', 'PLN', 'CNOT3', 'DPY19L2P2', 'C1QTNF8', 'PHAX', 'NPAP1', 'CRELD2', 'KDM4A', 'SCN1B', 'ZNF770', 'WNT8A', 'AEN', 'HTT', 'KLHL33', 'SNAP29', 'MTCH2', 'AMDHD2', 'LMO3', 'AHCYL2', 'REXO1L6P', 'TTC21B', 'SNORA71C', 'XBP1', 'ATP6V1C1', 'RAB35', 'TMEM2', 'KLHL25', 'GPR3', 'SDF4', 'FCMR', 'FERD3L', 'KRTAP4-11', 'TMEM263', 'SETMAR', 'MRC2', 'ABLIM3', 'EDEM1', 'GPR160', 'TRNT1', 'HRASLS2', 'EMCN', 'NR1I2', 'PLIN3', 'TCEA2', 'KRT74', 'C10ORF32', 'NEIL3', 'TRAPPC11', 'DENND6A', 'ZNF830', 'C18ORF8', 'TRAPPC3', 'TSHZ3', 'GTPBP4', 'DCAF12', 'ZNF697', 'C1QTNF9B-AS1', 'KLHL40', 'HLA-J', 'NIPAL2', 'CYP26B1', 'SNORD45A', 'CTDSPL2', 'PRR19', 'PSMD5', 'AMER1', 'CCDC168', 'PNRC1', 'C2ORF54', 'CALHM1', 'CATSPERG', 'KCNMB3', 'FAM73A', 'SNORD79', 'PHOSPHO1', 'NXPH3', 'IFT27', 'SMCO1', 'VNN1', 'FBN3', 'GNA12', 'GNPTAB', 'RAVER2', 'TFCP2', 'HMP19', 'TMEM261', 'RNASE6', 'KCNN2', 'REST', 'GTSE1', 'SAYSD1', 'CCDC66', 'UBE2C', 'C8ORF82', 'POLR3GL', 'C6ORF1', 'TARS', 'CDHR5', 'FCRL2', 'EED', 'MAN2C1', 'ISX', 'SCD5', 'AGFG1', 'TRPT1', 'ULK1', 'TLE4', 'RRP1', 'LANCL3', 'SCARNA20', 'UBE2DNL', 'TNFRSF10D', 'TMEM201', 'ZC3H12C', 'GNPAT', 'LINC01551', 'CSN3', 'ZNF675', 'EMBP1', 'OR6C6', 'CD24', 'COL11A2', 'TMEM177', 'CAD', 'GNAS-AS1', 'A2M-AS1', 'ACTN1', 'TRIM10', 'C1R', 'MTHFR', 'LOC100128288', 'ILDR2', 'OMG', 'GLP2R', 'TSEN54', 'VPS36', 'RPSAP9', 'UNC5D', 'MED12', 'ABCC10', 'AWAT2', 'SNORD113-7', 'CBX2', 'LOC647859', 'SPEF1', 'LINC00298', 'OR51F1', 'SLC25A1', 'RPL31P11', 'XPO6', 'NANS', 'TBC1D2B', 'APMAP', 'LYSMD3', 'ZNF804B', 'ANGPTL5', 'UBE2V2', 'ABCA9', 'SLC7A2', 'FBRSL1', 'PRPF3', 'DCDC2', 'TIMM21', 'LRRK1', 'PLCD3', 'GNAI3', 'TEX10', 'PRMT6', 'ERMP1', 'SERPINA7', 'E2F7', 'TSR2', 'POR', 'DIRC1', 'POU6F2', 'GCNT1', 'ELL3', 'SYTL5', 'MBOAT2', 'MCPH1', 'PHLPP1', 'SNCG', 'MMP7', 'ARFGAP3', 'CALCOCO1', 'SORBS1', 'SDHD', 'PEA15', 'G3BP2', 'MLH1', 'RBMY1A1', 'C10ORF107', 'METTL7B', 'FDX1L', 'DHODH', 'HIRIP3', 'RBMXL3', 'SCNN1G', 'MGAM2', 'SEC14L3', 'HHIPL1', 'HOXB13', 'FASTKD5', 'C17ORF105', 'CLTC', 'HEPHL1', 'CSN1S1', 'KRT81', 'TSPAN17', 'JAM2', 'ANKRD34C', 'C9ORF116', 'RASSF4', 'FER', 'RAB6C', 'CLEC1A', 'NT5C3A', 'CEP131', 'RFPL1S', 'RTP4', 'TBC1D3H', 'NEDD9', 'MYO9B', 'FAM46A', 'CSRP1', 'ACER1', 'PIFO', 'FGD3', 'TTTY9B', 'BACE1', 'COQ3', 'PZP', 'CCL27', 'MBTPS2', 'CEP350', 'SAP30L', 'PIGA', 'LOC340017', 'CTRB2', 'RPS6KA2', 'CHRNA9', 'RXFP2', 'BCL3', 'TRADD', 'OR4K17', 'UBALD1', 'HYPM', 'MAP3K4', 'LINC00879', 'DNAH7', 'ATG5', 'SNORD18B', 'CYP2B6', 'SFTPA2', 'PQBP1', 'GPR156', 'MED14', 'UPF3B', 'ATG101', 'ZNF628', 'SUSD5', 'PLEKHG7', 'C7ORF31', 'DCST1', 'SERPINB1', 'CHAC1', 'SLC6A1', 'PDIA6', 'SELV', 'CD19', 'RBM41', 'TAF8', 'CYB5D2', 'TUSC5', 'RFESD', 'ATP13A2', 'HOXB1', 'ECHDC1', 'CADM4', 'INTS8', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.867459249621905e-15 NRMSE: 7.750484458491616e-16 MAPE: 2.948102045021769e-12 Pearson Correlation: 0.15395181143719075 Spearman Correlation: 0.11096148331026573 Coefficient of Determination: -2.681759863429846 RMSE: 1.8066184762988744 NRMSE: 0.3551721142411187 MAPE: 800.4303847371799 Predictor: ElasticNet Pearson Correlation: 0.6797569518757197 Spearman Correlation: 0.6670879475508958 Coefficient of Determination: 0.3701854262144396 RMSE: 0.9322586727620734 NRMSE: 0.1484441057230778 MAPE: 433.4750877443933 Pearson Correlation: 0.6036113562695267 Spearman Correlation: 0.46502574845072886 Coefficient of Determination: 0.27920563819006694 RMSE: 0.7993636738995512 NRMSE: 0.1571508815121203 MAPE: 210.1147449271065 Predictor: RandomForests Pearson Correlation: 0.7691338405349734 Spearman Correlation: 0.7209100410227555 Coefficient of Determination: 0.5864650139138662 RMSE: 0.7554160506632182 NRMSE: 0.12028534929830548 MAPE: 263.83842096453225 Pearson Correlation: 0.7040611980036603 Spearman Correlation: 0.4340219978658449 Coefficient of Determination: 0.48346918684011875 RMSE: 0.6766854446314507 NRMSE: 0.1330329580921344 MAPE: 153.552032390482 Protein: CDH2 x_train_column_count: 474 x_train columns: ['ZDHHC18', 'KIR2DL3', 'NQO2', 'GRK7', 'DNAH10', 'ATP6V1C2', 'ZBTB6', 'BAIAP2L1', 'ADCK3', 'SNORD114-16', 'UNC79', 'METTL12', 'FGL2', 'MUTYH', 'CMTR2', 'KPNA7', 'PNPLA6', 'RBM7', 'ERMARD', 'ASCC3', 'WNT16', 'MOGAT1', 'GCM1', 'PLA2G4F', 'ZPR1', 'FAM177B', 'LRIT3', 'SLC25A19', 'TLL1', 'SYT17', 'C4ORF32', 'RPL27', 'TTTY21', 'ACSM4', 'MGAT5', 'MRPL27', 'BTN1A1', 'KLK10', 'HAVCR1P1', 'EIF4E2', 'TSTD1', 'LOC646813', 'FILIP1L', 'SNHG10', 'DSCAM', 'LINC00928', 'RAET1E', 'PPAT', 'ZPBP', 'HAPLN2', 'CUX1', 'CIB2', 'NINJ1', 'H3F3AP5', 'UNKL', 'BAZ2B', 'NAB1', 'SSTR5-AS1', 'PRSS58', 'GPR85', 'RABGGTA', 'FJX1', 'TMED7-TICAM2', 'GBA3', 'LMBRD2', 'C5ORF63', 'KGFLP1', 'AKAP6', 'NXF2B', 'RORB', 'KIF3B', 'DACH2', 'RCC2', 'MMP12', 'LINC01341', 'CXCL13', 'AUNIP', 'ORMDL2', 'PRSS41', 'PLAG1', 'TEX15', 'MLIP', 'TLR9', 'ZFP69B', 'AMZ2P1', 'COCH', 'ZNF624', 'LYZL4', 'CRABP2', 'TMX3', 'PGAM1', 'SNORA15', 'C19ORF48', 'PRNT', 'CHCHD6', 'LINGO2', 'FLVCR2', 'AVPI1', 'STRA13', 'SELM', 'RPAP2', 'CLYBL', 'CHCHD10', 'PCDHA7', 'RPL14', 'MOCS1', 'ZNF619', 'FLJ13224', 'UBE2L3', 'FKBP3', 'KIAA2022', 'IRGC', 'CHRFAM7A', 'SEPT10', 'LRR1', 'TRIM3', 'CSTF3', 'SSTR2', 'SNCG', 'C20ORF195', 'FAM169A', 'SSX2IP', 'MICAL3', 'MRPS31', 'STAC3', 'DNAJC15', 'C11ORF84', 'CDC42SE2', 'NKIRAS2', 'PTPRVP', 'RBM12B', 'CMPK2', 'ABCC5', 'NVL', 'CACNB2', 'TACSTD2', 'NLRP8', 'HIST2H2AC', 'DNAJB6', 'INHBA-AS1', 'SNORD119', 'ZNF382', 'MS4A13', 'C1ORF116', 'MIB2', 'OPN5', 'LOC148709', 'TAX1BP1', 'LAMTOR1', 'ZNF564', 'CD300LG', 'GNB1L', 'PPDPF', 'OR2J2', 'LDLRAD2', 'S1PR5', 'PCDH7', 'NKTR', 'CTHRC1', 'PRSS33', 'RAB8B', 'LRRC57', 'FBXL22', 'RBP3', 'HHLA3', 'PDIA5', 'ECT2L', 'ARNTL', 'SNORD116-1', 'ITSN1', 'USP16', 'C9ORF171', 'EPM2AIP1', 'SMARCE1', 'BCL2L1', 'CDKN2D', 'APOC2', 'LINC00620', 'TUBB6', 'BPIFA1', 'MAD2L2', 'RPS23', 'OPHN1', 'NTM', 'SAP30L', 'MIS18A', 'MAPT-AS1', 'CPT1A', 'SLC26A2', 'ELF4', 'INSL5', 'PRKRIR', 'GSTZ1', 'CDC37', 'LYPLA1', 'UBE2D4', 'FAM71A', 'MRPL20', 'TPX2', 'C17ORF85', 'LINC00189', 'TCEAL1', 'SNORA70', 'C1QBP', 'MIR155HG', 'FAM84A', 'TEAD1', 'C6ORF163', 'MYOM2', 'ITGB3', 'CERCAM', 'TAF4B', 'TRA2A', 'RAB43', 'RNF17', 'GFRA1', 'EPC1', 'LINC00652', 'AQP8', 'RTCB', 'MYH7', 'ZNF784', 'DCANP1', 'RPS27L', 'TICRR', 'EHBP1L1', 'FAM228A', 'POMP', 'ELMSAN1', 'MTCL1', 'ARHGEF16', 'OR51G1', 'GOLGA6L6', 'ITGA3', 'RPL23AP53', 'PSME3', 'CMTM5', 'FAM179B', 'DRAIC', 'BDP1', 'LOC728554', 'ZNF565', 'USH1C', 'C5ORF28', 'DHCR7', 'TRIM50', 'HDX', 'FAM126A', 'RAD9B', 'GINS4', 'PCYT1A', 'RRAGA', 'PRDX5', 'RBM24', 'PCDHGA5', 'TNFSF4', 'GPD1L', 'GOLGA3', 'DLX3', 'SOSTDC1', 'FCN2', 'HSPB11', 'SPRY2', 'MBD5', 'TTTY1B', 'OR6C75', 'SMTNL1', 'PGPEP1L', 'SOD2', 'COL24A1', 'SNX24', 'MORF4L2', 'IL17RC', 'TNFRSF4', 'TAS2R13', 'IRF4', 'DKK2', 'SLC10A6', 'PITPNA', 'S100G', 'WDR72', 'ATP7B', 'HNRNPUL1', 'ADARB2', 'CAMKMT', 'SNORD29', 'HIF1A', 'CCDC113', 'POLD1', 'HSBP1', 'BPY2', 'BTNL9', 'OR4N4', 'FAM178B', 'PHLPP1', 'TAAR8', 'GID8', 'CDH11', 'PXT1', 'TM4SF1', 'CTNNA2', 'ANXA2R', 'PLAC1', 'TCP10L2', 'IL24', 'LINC01599', 'CGA', 'FOXN2', 'MESTIT1', 'SRD5A3', 'NCL', 'PITX3', 'CTAG2', 'PAX2', 'BCRP3', 'FAM201A', 'CAAP1', 'SNRPD3', 'ADAD1', 'SCAND2P', 'LIN52', 'CACFD1', 'FAM120B', 'LOH12CR1', 'C1ORF189', 'RBBP9', 'CYB561A3', 'TOB2P1', 'DNAJC10', 'SLC45A2', 'P4HB', 'OTUD5', 'LINC01558', 'PPRC1', 'PRG2', 'SNORD35A', 'LOC400043', 'MIPEP', 'GNB1', 'TULP2', 'TIMM9', 'FAM222A', 'DAPK3', 'PRR23C', 'DTNA', 'ARL10', 'CDHR1', 'SMC6', 'NLGN2', 'COA7', 'DNAI1', 'KCTD2', 'RNF169', 'RAD18', 'PURB', 'ADAR', 'IL17C', 'TSPEAR-AS2', 'PNPLA8', 'ADPRM', 'WFDC8', 'CD27-AS1', 'CMIP', 'ESCO2', 'TMEM141', 'CLCF1', 'CA5B', 'SNORD111B', 'STRADA', 'DPP4', 'COQ5', 'SLC22A9', 'SPOCK2', 'DYNLT3', 'ELMOD3', 'DCP2', 'UBE4A', 'ING2', 'PTGDS', 'SLC6A1', 'ERCC6L', 'OR6C2', 'FAM196A', 'PTPRU', 'HMGN3', 'LRRC47', 'RPL6', 'MAD2L1BP', 'GSR', 'KIF22', 'LINC00113', 'DKKL1', 'TRMT5', 'PPP3R2', 'RNF168', 'GLDC', 'TACR3', 'SRFBP1', 'SPATA2', 'ATG4B', 'DDX28', 'EFNB3', 'RBM28', 'XAGE5', 'SPATA20', 'TMEM241', 'ZNF735', 'C15ORF61', 'PSG11', 'FAM110B', 'RAD51D', 'LINC00298', 'SNORA8', 'CERS4', 'NPIPB5', 'KRT36', 'JADE2', 'PPP3CB', 'JRK', 'CDNF', 'SAP30', 'CCK', 'PDIK1L', 'MPP7', 'OR4L1', 'PAG1', 'SLC7A6OS', 'FMNL1', 'SAP30BP', 'STARD5', 'PNPLA7', 'PNLDC1', 'CYP2S1', 'LOC113230', 'DBR1', 'ZNF562', 'TMF1', 'HMGN2P46', 'HIST2H2BA', 'CIDEB', 'FAM58BP', 'LOC284441', 'CCDC150', 'SNAPC1', 'P2RY13', 'PALM2-AKAP2', 'TSSC2', 'KIAA1324L', 'TM9SF2', 'CHRNA3', 'AES', 'ZMYM4', 'COL19A1', 'NECAB1', 'LEPR', 'TCP11L2', 'LRRTM1', 'C10ORF131', 'HEPHL1', 'RTP5', 'CEACAM22P', 'LCN15', 'SPATA41', 'EFEMP1', 'GOLGA7', 'MCTS2P', 'S100A7L2', 'BASP1', 'FABP3', 'FOXD1', 'MTG1', 'SOBP', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.8604888005811551 Spearman Correlation: 0.8209658407603668 Coefficient of Determination: 0.7087563012510781 RMSE: 0.2057426899248069 NRMSE: 0.07454985503471517 MAPE: 2475.646517830296 Pearson Correlation: -0.018922317385579587 Spearman Correlation: 0.022646167657950852 Coefficient of Determination: -13.569163002739986 RMSE: 1.267147522724746 NRMSE: 0.6676647220713354 MAPE: 14617.708103542418 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: RandomForests Pearson Correlation: 0.5453998176975716 Spearman Correlation: 0.4711508594747192 Coefficient of Determination: 0.20176780678823258 RMSE: 0.34061264299506044 NRMSE: 0.12341932132584262 MAPE: 290.6208511769089 Pearson Correlation: -0.04620679232047091 Spearman Correlation: 0.012566241474332598 Coefficient of Determination: -0.06151786804178028 RMSE: 0.34203734932913876 NRMSE: 0.18022074595292578 MAPE: 2961.4443204707177 Protein: CDH3 x_train_column_count: 75 x_train columns: ['DEK', 'NCSTN', 'PTGFRN', 'ARID5A', 'C11ORF54', 'ERP44', 'C10ORF95', 'NCK1', 'COL4A4', 'FIG4', 'PGBD2', 'ZBTB9', 'MYL9', 'OR4N5', 'SMPDL3A', 'MPP3', 'NRG4', 'ARHGEF10L', 'KRT24', 'ABCA11P', 'EVPL', 'KRTAP19-7', 'ZNF443', 'PRIMPOL', 'CHERP', 'TNFRSF11B', 'SH2D5', 'OR8G2', 'FGF21', 'TMEM155', 'FUT9', 'CTSS', 'ABCF1', 'SESN2', 'EEF2K', 'JAK3', 'LOC728323', 'TMEM194B', 'MYH9', 'ATP6V1C2', 'ITGA4', 'LOC646813', 'ZC3H11A', 'DCTN2', 'DIAPH3', 'HPN-AS1', 'DYTN', 'GLTSCR1L', 'OR5B17', 'ISLR2', 'IQCF3', 'MMGT1', 'KRTAP5-7', 'FRMPD1', 'EMP2', 'CELSR3', 'TCTEX1D1', 'NCAPH2', 'MTX1', 'COQ9', 'KLF2', 'GPR27', 'DDX11L2', 'PRRT4', 'FRA10AC1', 'LINC00202-1', 'CCR2', 'ADRA1D', 'CRHR1', 'MTMR8', 'CHRNB1', 'FBLN7', 'OR2T33', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.569765305996376 Spearman Correlation: 0.549200684349932 Coefficient of Determination: 0.3245173725068018 RMSE: 0.17465776583121198 NRMSE: 0.1225358967778049 MAPE: 593.5676636187113 Pearson Correlation: 0.1942570454427098 Spearman Correlation: 0.2213967755208918 Coefficient of Determination: -0.11834638366540284 RMSE: 0.19916072014718375 NRMSE: 0.17323294523400953 MAPE: 310.7677567897378 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: RandomForests Pearson Correlation: 0.5578146102317249 Spearman Correlation: 0.5695772744583486 Coefficient of Determination: 0.2585090782680668 RMSE: 0.182992684207046 NRMSE: 0.1283834850192555 MAPE: 497.439438256013 Pearson Correlation: 0.3383568542369483 Spearman Correlation: 0.30570206611055 Coefficient of Determination: 0.10984225675016723 RMSE: 0.177684279715875 NRMSE: 0.15455241914277576 MAPE: 182.42963661476892 Protein: PTEN x_train_column_count: 886 x_train columns: ['MYCT1', 'CACNG6', 'ERCC1', 'UNC13D', 'LOC91450', 'WBSCR27', 'AADAC', 'EGFL8', 'ACBD4', 'LGALS12', 'EHF', 'ZNF155', 'KCNK16', 'CARD9', 'ATP5SL', 'PCDH20', 'OR51D1', 'KDELR2', 'LIPF', 'PIWIL4', 'ZRANB3', 'BAHD1', 'GRIK1', 'RINL', 'JADE3', 'IER2', 'SNORD116-3', 'FZD5', 'GNG7', 'TCEANC', 'KRTAP23-1', 'OR4C46', 'CLDN11', 'TMEM63C', 'PLK4', 'RAB34', 'TSG1', 'MPP5', 'NOX3', 'TNIP1', 'VCPIP1', 'RALBP1', 'IMP3', 'SYNDIG1', 'PRCC', 'PDHB', 'KPNA6', 'GOLGA7', 'SLC25A3P1', 'SUN5', 'R3HDML', 'HK2', 'PHF6', 'PIP4K2A', 'CROCCP2', 'SLC6A9', 'LINC00032', 'XPO6', 'FAM161B', 'HSBP1', 'ZNF676', 'SENP8', 'POLR3B', 'RFNG', 'GALNT13', 'MSX2P1', 'DMBT1', 'FAM98C', 'ADGRG3', 'CYP21A2', 'RP2', 'UNC5CL', 'YIPF5', 'SCGB1B2P', 'PADI1', 'TCAIM', 'RLN1', 'PGAP2', 'DGKD', 'SMAD6', 'CHIC1', 'TCEAL3', 'ST6GALNAC5', 'ISM1', 'PTBP3', 'PCDHGA2', 'CORO6', 'IER5', 'CENPP', 'KRT32', 'ZNF791', 'FER1L5', 'SMCR5', 'RPS2P32', 'GID8', 'ZDHHC13', 'GTPBP1', 'AARD', 'PCDHA4', 'SPRR2C', 'ZNF581', 'TMEM263', 'SPPL2A', 'SNAR-H', 'CARNS1', 'ARMT1', 'CAB39L', 'FAM179B', 'WNK1', 'XRCC4', 'PRR35', 'SH2D1B', 'LMOD3', 'REXO2', 'MRPL3', 'SIRT7', 'TTLL11', 'PRMT5', 'SLC8A3', 'XKR6', 'BCL2', 'PAX1', 'MMP1', 'GPIHBP1', 'DACT1', 'SYNRG', 'FOXM1', 'G6PC2', 'IQGAP3', 'GDPD5', 'DDC', 'MYO15A', 'MIA2', 'TMEM136', 'MPDZ', 'SLC6A1', 'COG3', 'LINC01591', 'ADGRF5', 'NKG7', 'ERGIC2', 'COX11', 'COX7B', 'SNORD114-20', 'PTGS2', 'SCCPDH', 'ST8SIA2', 'FAM162B', 'SMIM15', 'HS3ST1', 'ZBED2', 'TMEM59L', 'PRKCE', 'TMEM219', 'LOC645166', 'PDE3B', 'JAKMIP3', 'MIB1', 'RAB11FIP2', 'LAT2', 'DPH3', 'ZNF835', 'GPR19', 'SNX29', 'ZNF883', 'ESCO2', 'MRPS23', 'FFAR2', 'EEF2', 'ZDHHC17', 'SLCO6A1', 'IDH3A', 'GNB1', 'SEC63', 'ARFGAP1', 'VN1R4', 'WARS', 'SRSF8', 'CTSO', 'SLC32A1', 'SQRDL', 'TAF9', 'LINC00667', 'STARD3NL', 'CTDSP2', 'RPUSD4', 'TUBG2', 'LOC728392', 'ACPP', 'CACNG1', 'PSMA8', 'CDK5RAP3', 'GBA2', 'VPS51', 'XG', 'KLHL24', 'WDR60', 'SKAP1', 'DOCK2', 'MIR17HG', 'TMEM179', 'SNORD116-23', 'TBC1D3H', 'C9ORF64', 'C9ORF153', 'MAZ', 'NEU2', 'NT5C1A', 'FAM69B', 'ARMCX5', 'IL2', 'ZNF774', 'PDZD7', 'MS4A8', 'CEP290', 'ATXN7L3', 'IFI44L', 'MUL1', 'CCSER2', 'RUVBL1', 'CDH24', 'ZCCHC13', 'CRLF2', 'RHOBTB2', 'SLCO4A1', 'CSPG4', 'DYNC1LI1', 'TTTY17A', 'CPPED1', 'PRDX3', 'MORC1', 'TMCC3', 'GPR89A', 'C20ORF85', 'KDM3A', 'EXPH5', 'DNM3', 'MED1', 'TMEM156', 'KRT72', 'GSTZ1', 'HSFY1P1', 'C17ORF98', 'PEX11A', 'HLX', 'CIB1', 'LOC613037', 'TTC33', 'SPATA33', 'ZNF184', 'ARL14', 'LINC00298', 'EFHC2', 'PCDHB19P', 'OR10A4', 'POU4F1', 'FAM35A', 'DDX17', 'SLC25A20', 'AKNAD1', 'PPP1R1A', 'NELL2', 'VPS35', 'FBXO44', 'COX4I2', 'RPAIN', 'SLIRP', 'DNAJC1', 'STRADA', 'KCNQ3', 'BBC3', 'TFIP11', 'CLNS1A', 'ZNF514', 'MATR3', 'NHS', 'LINC00893', 'B4GALT7', 'PNISR', 'RBP3', 'MMAA', 'POC1B', 'HABP2', 'MGAM2', 'PVRL3', 'TFAMP1', 'SPNS2', 'DUSP4', 'PTDSS2', 'C1ORF95', 'SNF8', 'MOCS3', 'POLR2J', 'CCNB2', 'COA3', 'GIMAP4', 'SPAG4', 'BAK1', 'PAPOLG', 'TRAPPC2', 'GPR132', 'RCN3', 'ERLIN2', 'IQCJ', 'ISOC2', 'FDXR', 'RNF213', 'DCAF4L2', 'SMG1P3', 'MYBL2', 'WNK3', 'MB21D1', 'TRIM74', 'PLAA', 'PRL', 'FOXI1', 'GJB1', 'PIK3CD', 'TBCEL', 'C10ORF10', 'GALNT8', 'TTC31', 'RDH8', 'MEF2C', 'BAG3', 'SYT13', 'TMPRSS11D', 'MARCKSL1', 'C9ORF116', 'TCHH', 'MRPL21', 'TRAPPC1', 'ABCC10', 'MAGEA3', 'SNORD102', 'SPOP', 'BAG4', 'ZNF131', 'CARS', 'SPATA32', 'LINC01465', 'PCDH10', 'MEIS3P1', 'PTCD3', 'SCAND1', 'LOC202181', 'TCIRG1', 'ADRBK2', 'RSPRY1', 'PIK3R5', 'MGAT1', 'C3ORF79', 'TSC2', 'IZUMO4', 'OR2T2', 'SYCE1', 'ZNF772', 'TP63', 'NOC4L', 'GLRA4', 'SFRP4', 'F13B', 'GSTA5', 'NLN', 'IQUB', 'WARS2', 'OR4E2', 'IMP4', 'SNAR-A2', 'STXBP1', 'NUDT4', 'LURAP1', 'MDH2', 'FIBP', 'CCNT1', 'FGFBP2', 'APPBP2', 'NDNL2', 'FASTKD1', 'RAB4B', 'ZNF816', 'PITX3', 'CHRNB1', 'MYLK', 'SESN3', 'PIP5K1B', 'ASH2L', 'PLOD1', 'ARHGEF25', 'PCBD1', 'VTN', 'SEC13', 'TRIM53AP', 'GKN2', 'NPW', 'YEATS4', 'PPM1E', 'SULT1A1', 'DUX4L6', 'OSR2', 'INPP5E', 'CCDC13', 'FAM3C', 'CHRNA10', 'ECEL1', 'TMEM14E', 'TYRP1', 'CRP', 'SUOX', 'CHID1', 'TNC', 'NINL', 'RHBDD2', 'ARL6IP5', 'CATSPERB', 'C16ORF71', 'RBFA', 'MMADHC', 'CCDC102A', 'MMGT1', 'MYT1', 'REC114', 'TTTY17B', 'SLC25A51', 'WDR27', 'DNAJB14', 'GAS2L1P2', 'SNORA53', 'TMIGD1', 'EXOSC8', 'SSR1', 'TMEM126B', 'ILKAP', 'CDHR5', 'ISCA2', 'TLR1', 'RAB24', 'OR6W1P', 'YARS2', 'XRCC2', 'KRT10', 'CARD11', 'PSMA4', 'DNAJC5G', 'C11ORF86', 'MFSD12', 'KDF1', 'TIMM22', 'TMPRSS9', 'TBL2', 'MNX1', 'CDC34', 'NUDCD2', 'OR10K1', 'QSOX2', 'RASSF7', 'AADACP1', 'GPC5', 'NUDT5', 'GMPR', 'CCDC153', 'ASIC5', 'EPB41L4A-AS2', 'ACER2', 'GCG', 'MAGEB3', 'MIR100HG', 'PKIA', 'TMEM92', 'GOT2', 'AFAP1', 'UBASH3B', 'LAMA1', 'PRR15L', 'JMY', 'FAM65A', 'TMEM170A', 'ZNF70', 'RPF2', 'ATP5L', 'DUSP7', 'TMPRSS6', 'OR2T3', 'SLC4A4', 'ST13', 'TPPP3', 'ZNF718', 'C8ORF74', 'B3GALNT1', 'OSTF1', 'ABI1', 'ACOX3', 'CEP44', 'GPD1', 'ZNF517', 'CGRRF1', 'ATP1A1', 'DUSP5P1', 'SNORD67', 'TCF4', 'CT47A9', 'RUNX1', 'FAM171A2', 'HIST1H2AB', 'TMEM79', 'ROCK1', 'GTDC1', 'CD248', 'CENPO', 'NPR1', 'VPS72', 'DYNAP', 'COA7', 'TNFAIP2', 'ZBTB47', 'IKZF1', 'MRAS', 'FANCL', 'MRGPRF', 'TMX1', 'POMK', 'SNORD115-39', 'PRTG', 'OTOR', 'SEPHS1P1', 'KRT73', 'CSDE1', 'UBN1', 'TSPY2', 'EVI2B', 'ERAS', 'PMS2P5', 'SNORD82', 'RFXAP', 'BSN', 'ATXN1L', 'DDIT3', 'MUS81', 'GTF2H1', 'BNIP2', 'BTN1A1', 'COG6', 'LOXL1', 'LINC00696', 'C1ORF204', 'ATP1A1-AS1', 'ATHL1', 'LYRM4', 'ECE1', 'TUBB4B', 'PTTG1IP', 'LIN52', 'NUTM2A-AS1', 'ZWINT', 'AUNIP', 'SPRED1', 'METRNL', 'GPD1L', 'BMS1P20', 'GYS2', 'GSTA2', 'ZSWIM2', 'YBEY', 'SLAMF7', 'GDA', 'TRIAP1', 'TOMM22', 'MYH10', 'CWC25', 'SNORD113-9', 'ANAPC1', 'IL23A', 'MORN5', 'GAGE2D', 'OR4F21', 'TUBA1C', 'FAM133CP', 'CST1', 'ADCY10', 'AZIN2', 'OR6B3', 'RAB5B', 'OPALIN', 'HTR2A', 'DCTN5', 'C1QTNF4', 'HAMP', 'FIGNL1', 'WDR36', 'SLC2A10', 'FRMPD1', 'NHLRC1', 'IQCC', 'ATXN2L', 'SC5D', 'LANCL1', 'CELA2A', 'RPA4', 'LBH', 'CAPRIN1', 'UGT2B10', 'LDB1', 'EPHA7', 'ZMYM5', 'HNF1B', 'ISLR', 'ENTHD2', 'DPP7', 'C1ORF140', 'GTF3C2', 'TP73-AS1', 'FADD', 'ACSM3', 'OR2AE1', 'NT5DC2', 'TNFAIP3', 'DCLK1', 'SLX1B', 'TMEM161A', 'GALNT11', 'PSG7', 'ADAMTS19', 'MAK16', 'KLHDC1', 'FGF12', 'TREML3P', 'ACOT7', 'SPAG11A', 'TDRD3', 'ZNF398', 'KRTAP4-4', 'SP5', 'ZNF286A', 'SLC26A1', 'OR1S2', 'TAAR6', 'LILRA2', 'REM1', 'CDR2L', 'SERTM1', 'C11ORF49', 'TMEM223', 'FER', 'SNORD46', 'TCTA', 'NIPSNAP3A', 'PPIL1', 'HLA-DQB1', 'CD320', 'C14ORF37', 'CDKAL1', 'SHKBP1', 'LBHD1', 'DNM1L', 'LRRC74A', 'FAM110C', 'ALG9', 'SUGP2', 'CFAP52', 'INO80B', 'CHKB', 'SFT2D2', 'TEX2', 'DEFB113', 'ST6GALNAC1', 'BTBD1', 'FRY', 'OR52B6', 'EXOSC5', 'MSTN', 'ULBP2', 'PAF1', 'ANKRD30BL', 'HSP90AB1', 'PSG5', 'C14ORF177', 'MCPH1', 'COX7A2', 'C5ORF24', 'RPN2', 'THSD1', 'ZSCAN4', 'TUBA3E', 'NTRK1', 'KLHL12', 'RNF168', 'LECT2', 'DDX10', 'HTR1A', 'LOC100128573', 'ENPP5', 'TM9SF3', 'TAC4', 'CANX', 'PKIG', 'SRP68', 'CCBL1', 'VIM', 'C8ORF76', 'GBA3', 'TMEM39A', 'TMEM150C', 'INTS4', 'PADI3', 'TIMM17A', 'EEF1E1', 'BMP5', 'ACOT2', 'UBXN1', 'COASY', 'GAGE12F', 'CCT4', 'ACTG2', 'PPP3CB', 'KIAA1045', 'CLDN23', 'DLGAP2', 'LOC644936', 'ASB1', 'SH3BGRL3', 'SNORA70B', 'SLC22A5', 'C21ORF58', 'ZBTB1', 'PXYLP1', 'CDK8', 'MAGEA2', 'USPL1', 'CENPC', 'HIST1H2BF', 'ATP5O', 'RAX', 'CFAP44', 'PWAR5', 'TAF7', 'ANKRD31', 'SEMG2', 'ADAM15', 'LMNTD2', 'HIST1H3C', 'RNF41', 'ARL6IP4', 'HOXA5', 'CLEC16A', 'KIF18A', 'HBD', 'SAP30BP', 'FAM103A1', 'MRPL36', 'FAM8A1', 'ZNF236', 'NUDT7', 'CTXN2', 'PRAMEF10', 'PTK2B', 'CRYM-AS1', 'ATP11A', 'SNORD33', 'SLC25A24', 'STAM2', 'ZRANB2', 'SEBOX', 'HDHD2', 'COL7A1', 'TMED10', 'ZG16B', 'CELF1', 'PRSS38', 'GSAP', 'DDX26B', 'KRT8P41', 'LAP3', 'PTMA', 'BGN', 'APLNR', 'FOXH1', 'CLK1', 'INPP5F', 'NCS1', 'ZNF704', 'SETDB2', 'BHLHE40', 'SUPT4H1', 'C8A', 'SPDYA', 'WDR44', 'PMP22', 'GAS2L1', 'RAB8A', 'MTERF4', 'BTN3A3', 'ACSS3', 'BCRP3', 'PRELP', 'STUB1', 'C1ORF52', 'FAM26D', 'SLC9A7', 'SMAD1', 'CLEC3A', 'PFN1P2', 'KATNBL1', 'C9ORF91', 'GPR82', 'RASL11B', 'NUDT19', 'TMEM86B', 'CHD2', 'CYP2A6', 'WDR49', 'UBAC1', 'PSMB5', 'PAEP', 'MARCH11', 'MDK', 'CLEC1B', 'PRKCH', 'HYKK', 'PRDX5', 'TSC22D3', 'TMEM53', 'ZMYND8', 'INPP5B', 'ZNF512', 'NRSN1', 'ME2', 'PLP1', 'SKOR1', 'C4ORF32', 'TTC39C', 'SCARNA8', 'PCDHGA12', 'WFDC8', 'SF3B5', 'CDK12', 'MCM7', 'STAP2', 'PSMA5', 'ADPGK', 'BEST1', 'NUCB2', 'CUX2', 'POGK', 'GLT8D2', 'PHLDB1', 'LRRN4CL', 'SPAM1', 'SUSD1', 'TCTN2', 'C20ORF203', 'SPAG8', 'PTGFRN', 'NFS1', 'ALOXE3', 'LOC400043', 'GRAMD2', 'SYN1', 'HGC6.3', 'OR4C45', 'ZNF582', 'CHAC1', 'FAM169B', 'SNORD115-16', 'ARFGEF3', 'NAPA', 'THNSL1', 'L3MBTL3', 'PDRG1', 'FANCD2OS', 'ANKRD34A', 'RAET1G', 'PLAG1', 'RARB', 'FAM46C', 'KLF4', 'HSD17B1', 'ADIRF', 'KRTAP19-5', 'PDSS1', 'GLYCTK', 'ZNF771', 'RPL27A', 'NOP14-AS1', 'CHST2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.144284889161751e-15 NRMSE: 4.916401984460559e-16 MAPE: 9.435726475063416e-12 Pearson Correlation: 0.03242048566970334 Spearman Correlation: 0.09090637040362101 Coefficient of Determination: -3.875651903677637 RMSE: 1.0399175436012869 NRMSE: 0.24862945144199466 MAPE: 369.73347215037484 Predictor: ElasticNet Pearson Correlation: 0.4258685299903022 Spearman Correlation: 0.4345392041093361 Coefficient of Determination: 0.07301010165736921 RMSE: 0.6058865498739783 NRMSE: 0.09473638493846896 MAPE: 336.5134995887785 Pearson Correlation: 0.31769435118501493 Spearman Correlation: 0.29993640818464073 Coefficient of Determination: 0.006033268483404464 RMSE: 0.4695355540375007 NRMSE: 0.11225925358329764 MAPE: 93.3593779233007 Predictor: RandomForests Pearson Correlation: 0.6168717222753733 Spearman Correlation: 0.5227283765433064 Coefficient of Determination: 0.304003083814843 RMSE: 0.5249977819436478 NRMSE: 0.08208862199103241 MAPE: 282.8538989332964 Pearson Correlation: 0.4009322818174667 Spearman Correlation: 0.4193892691928827 Coefficient of Determination: 0.14776930002848843 RMSE: 0.43477157891397533 NRMSE: 0.10394768299956375 MAPE: 112.12175898126742 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['CDCA7', 'PTGR2', 'CNNM1', 'GLRA3', 'KRTAP10-11', 'DIRC2', 'GPR17', 'OR4D6', 'FARSB', 'CEACAM6', 'SEPSECS', 'ANKRD36', 'NELL2', 'BAP1', 'COL6A4P1', 'OR6S1', 'HNRNPCL3', 'CELA3A', 'DEFB131', 'TRAPPC9', 'SULT4A1', 'SRBD1', 'GPR158-AS1', 'YY1AP1', 'UGT1A10', 'YPEL2', 'MAP4', 'LOR', 'NAB2', 'RAF1', 'ANKFN1', 'TBC1D3', 'PELO', 'ARHGEF18', 'KRTAP5-4', 'TMLHE', 'GRAMD1A', 'PIN1P1', 'MAD2L1', 'MARK2', 'MCUR1', 'PPBPP2', 'IRF7', 'PHAX', 'SLC8A2', 'ASH1L', 'MARCH1', 'SUV420H1', 'ZNF519', 'EHD1', 'CCDC124', 'BSPH1', 'ITGAV', 'SLC6A17', 'RRM1', 'ZNF134', 'MXRA8', 'NME8', 'HCG18', 'DDX21', 'DAB2', 'SCUBE2', 'CALCOCO2', 'C16ORF71', 'KIR3DL2', 'PPWD1', 'GNAT3', 'SLC25A32', 'FATE1', 'WNT11', 'MANSC1', 'CRHR2', 'NDUFS5', 'BCAS1', 'HSD17B4', 'SAFB2', 'CCDC91', 'PUM1', 'BRINP1', 'IFNLR1', 'CD8A', 'C12ORF76', 'DNHD1', 'KATNBL1', 'ZFYVE27', 'ZNF512', 'IL5RA', 'C3ORF14', 'ALPI', 'WNT5B', 'TAPBPL', 'SULT1A3', 'KIF26B', 'GK2', 'ZSCAN12', 'CYP2F1', 'STX10', 'ARPC1B', 'DGCR5', 'HERC1', 'GNA15', 'S100A1', 'HMGA2', 'GSS', 'ATF7IP2', 'SFXN2', 'SRSF7', 'SKIL', 'ZDHHC2', 'LMF2', 'OACYLP', 'NUPR1', 'MRPS2', 'DNAI2', 'NSMCE4A', 'CTSH', 'ADCY5', 'ABCB6', 'BACE1', 'C2ORF69', 'PEAK1', 'WNT4', 'ASB13', 'FASTKD5', 'ABCC10', 'ZNRF2', 'CISD1', 'SPRYD4', 'PRKAR2A', 'LDLRAP1', 'LAMTOR4', 'ITGA3', 'MIR4697HG', 'LRRC57', 'TMED7', 'NOTUM', 'TMEM102', 'FTHL17', 'PDZK1IP1', 'ADAP2', 'ST7-AS2', 'NXPE2', 'ANP32AP1', 'MTDH', 'HSPB1P1', 'NMUR1', 'ZNF678', 'TVP23C', 'METTL15', 'CREBBP', 'ACTRT1', 'YLPM1', 'IL23R', 'C14ORF28', 'DAPK2', 'BTC', 'FSCN1', 'LPPR5', 'FAM53A', 'CYLD', 'EIF2D', 'MAP1LC3C', 'ERLEC1', 'KIF1BP', 'KIF21B', 'MRPS11', 'DLEC1', 'GSTK1', 'LRRC75A-AS1', 'TACO1', 'RLTPR', 'MAGI2', 'RHEBL1', 'ITGB5', 'C8ORF74', 'ITPRIPL2', 'NOL4', 'MYO1H', 'AFAP1L1', 'UBR5', 'IDI2', 'FBXO4', 'AASDH', 'AADACP1', 'C1ORF146', 'MARCH11', 'LINC00240', 'MFAP4', 'FGD5', 'MMAB', 'GPR62', 'ITPRIP', 'BRS3', 'NELL1', 'PNPLA5', 'ZNF267', 'FAM192A', 'C9ORF171', 'HSPBAP1', 'TSN', 'TBC1D16', 'PCDHA10', 'LETM1', 'DPYS', 'XKR3', 'TTC21A', 'KRT33A', 'PLVAP', 'MYO9A', 'BAGE2', 'SNORD116-8', 'RBBP7', 'NTSR1', 'OR51M1', 'TCHP', 'IFNAR2', 'UBE2Q2P2', 'HIST2H3C', 'RPRD2', 'TBL1X', 'TAS2R3', 'ZNF792', 'HIST1H2AK', 'GNB5', 'SNORD116-11', 'PACSIN2', 'YWHAEP7', 'LINC00523', 'ANP32E', 'LL22NC03-63E9.3', 'SOD2', 'TOR1AIP2', 'LSM5', 'ZNF704', 'ATOH7', 'ZNF45', 'MST1R', 'NNAT', 'RNF34', 'SNORD35B', 'SNORD2', 'VPRBP', 'DDA1', 'PSORS1C2', 'CX3CL1', 'THUMPD3-AS1', 'OCM', 'SUPV3L1', 'IFNA5', 'CLPTM1', 'C3ORF35', 'LINC00654', 'PRDX2', 'ZNF836', 'GSTCD', 'SLC37A1', 'CEP250', 'HTR3E', 'CELA1', 'CCT2', 'DCT', 'FAM157A', 'UGT3A1', 'L2HGDH', 'SLC36A1', 'ACBD6', 'DNAJB5', 'KIAA1324L', 'PDE6G', 'DHODH', 'UPK1B', 'APOBEC4', 'MRPS14', 'CBR3', 'LOC256880', 'TMEM155', 'ATAD5', 'MTX2', 'RBM33', 'CTNNBIP1', 'POLR3F', 'SUSD3', 'PAGE5', 'CEP83-AS1', 'RHBDD3', 'PCSK2', 'ZDHHC12', 'FOXE1', 'PSMA4', 'LCOR', 'ZMYND11', 'CCDC37', 'GNAL', 'ERP29', 'OBFC1', 'NCAPG', 'SNORD114-29', 'TPH2', 'CAPN9', 'MEGF6', 'UNC5CL', 'CLPX', 'CXORF36', 'SLC6A11', 'GCA', 'CYTH2', 'ZNF540', 'SNHG7', 'HOOK2', 'GFER', 'RNF151', 'PGPEP1', 'CATSPERB', 'FAT1', 'CHRNA4', 'FBLL1', 'SRMS', 'POMT2', 'CARD16', 'DSN1', 'POU2F1', 'C12ORF45', 'SLC35D1', 'USP3', 'EIF5AL1', 'GINS1', 'POU6F1', 'ATP6V1G2', 'OSGIN1', 'KLHL34', 'COQ4', 'COBL', 'EEF1E1', 'SERPINB1', 'SOHLH2', 'EIF3D', 'ETFB', 'TM4SF4', 'ATP6V1C1', 'CSF2', 'TIPARP', 'PLAG1', 'SLX1B', 'MBLAC2', 'C11ORF74', 'KLK14', 'CYP2D7', 'GRHL1', 'SLC13A3', 'EPX', 'S100A7L2', 'MAGT1', 'ARHGAP21', 'RECQL', 'BNIP3', 'ZNF223', 'SNX12', 'FKRP', 'TCEANC', 'ZC4H2', 'ALG1L2', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.8403428406390435 Spearman Correlation: 0.8104770367552789 Coefficient of Determination: 0.7061760897831997 RMSE: 0.10301768378332576 NRMSE: 0.069432024764326 MAPE: 237.61779525922145 Pearson Correlation: 0.08445268388952036 Spearman Correlation: 0.0718737141360865 Coefficient of Determination: -2.1728043231762166 RMSE: 0.3814187511816495 NRMSE: 0.2623436100266523 MAPE: 752.6625637239908 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: RandomForests Pearson Correlation: 0.5851771228650248 Spearman Correlation: 0.5404118722380297 Coefficient of Determination: 0.2149706885202347 RMSE: 0.16838800456223943 NRMSE: 0.11349041905631753 MAPE: 165.4532171230215 Pearson Correlation: 0.1714967894928984 Spearman Correlation: 0.20829935535355806 Coefficient of Determination: 0.028253988632005456 RMSE: 0.21108471133781057 NRMSE: 0.14518616355969885 MAPE: 176.05609906296223 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['MMP12', 'ZHX3', 'CHP2', 'IRS1', 'FAM195A', 'UBXN2A', 'IL7R', 'ACOX2', 'PLAU', 'LRRC36', 'RBM22', 'IPO5', 'AGO2', 'KRT13', 'POLR3A', 'SGCD', 'MRPL17', 'SENP3', 'ZNF676', 'PRPS1L1', 'WDR49', 'SMC2', 'IQUB', 'CD1D', 'RPP38', 'SNORD115-4', 'SLC4A3', 'ECE2', 'APOA2', 'DDA1', 'CARD17', 'TMEM132C', 'PAGE5', 'TMEM201', 'MROH8', 'ZNF337', 'DST', 'TXNDC5', 'FGF2', 'FBXO48', 'WDR93', 'CAPZB', 'C11ORF95', 'ZNF503-AS2', 'CD40LG', 'MCM5', 'ASH2L', 'AFAP1-AS1', 'PEX11B', 'SCN3B', 'SH3BP1', 'LY86', 'RNF115', 'ZDHHC5', 'ARHGEF25', 'SYT16', 'STYXL1', 'OLFML3', 'KLHDC7A', 'NKX1-2', 'CHST7', 'NDUFS5', 'GTF2F1', 'HSFX2', 'ZFHX4', 'RAMP3', 'UBE2Z', 'USP32', 'RBCK1', 'PPP1R14C', 'PRAMEF4', 'LOC341056', 'KRTAP5-5', 'WSCD1', 'KRTAP6-3', 'NUP50', 'C2ORF78', 'CCDC74B', 'FAM215A', 'EBF1', 'CASC3', 'COL26A1', 'OR10W1', 'FAM41C', 'THNSL1', 'NUP107', 'REC114', 'GXYLT1', 'PRICKLE2', 'PIP4K2B', 'VSTM2B', 'DLEU2L', 'ASAH1', 'CEBPG', 'UQCRC1', 'TAF15', 'TMEM80', 'NPM1', 'ADTRP', 'BOLA3', 'CSMD1', 'TUBA4A', 'UPF2', 'KRTAP21-1', 'FMNL2', 'SNX21', 'TMEM87B', 'NANOS3', 'ASB6', 'HMGCS1', 'SAC3D1', 'C7ORF25', 'UIMC1', 'MFSD9', 'SPAG17', 'PPAP2B', 'PFKFB3', 'SNORD32B', 'SNORD111', 'FMO3', 'EDEM3', 'LRSAM1', 'PASD1', 'ACTRT2', 'IAH1', 'PRR18', 'ADAMTS16', 'CXCL11', 'ZNF620', 'GATA4', 'RIN1', 'OR51F2', 'CENPV', 'IPO7', 'NDUFB10', 'EFHD2', 'ZNF205', 'PATL1', 'EN1', 'PRR26', 'ZFHX3', 'FAM69C', 'KRTAP21-2', 'AGL', 'C19ORF48', 'ELMSAN1', 'PPP2R4', 'TNR', 'C8ORF48', 'HMP19', 'FAM9B', 'KRTAP10-7', 'DDX12P', 'CHST4', 'FAM162B', 'C1QTNF1', 'RNF135', 'GOLGA7', 'ZNF33A', 'GLMN', 'OR3A1', 'ODF2', 'FCGR1C', 'TMEM71', 'CPSF7', 'SCGB1C1', 'CA9', 'ITGA11', 'MLEC', 'BRD2', 'CREG1', 'ESAM', 'KCNMB2', 'S100G', 'CDCA8', 'MOB1A', 'SAMD12', 'LOC344967', 'VPS28', 'SPINT1', 'IFNA2', 'LRRTM3', 'MSRB1', 'OAZ3', 'SLC17A2', 'NANOS1', 'PRAMEF14', 'OTUD7A', 'TMEM44', 'ASCC1', 'RFX2', 'BRDTP1', 'STK33', 'KIAA0408', 'SPANXN1', 'SNHG9', 'RPL31P11', 'CWC27', 'AGO1', 'EFCAB12', 'RRAGC', 'PSG2', 'NKX2-4', 'ASAH2B', 'SRA1', 'CCDC53', 'GTPBP10', 'ATP5H', 'SNORD114-10', 'APH1B', 'CD48', 'TUFM', 'SNORD59B', 'SP100', 'SLC39A2', 'CD27-AS1', 'SLC37A3', 'CEACAM21', 'TMEM99', 'CEBPB', 'PCDHB17P', 'AQP7P1', 'DSEL', 'C14ORF1', 'RPS2P32', 'MROH6', 'GAPDHS', 'MYH9', 'GMPR', 'SIDT1', 'PLEKHF1', 'ZGLP1', 'FAM213A', 'ST6GAL1', 'NFKB2', 'ITPRIPL2', 'SNORD115-5', 'OR52E8', 'HNRNPUL2', 'PCNT', 'DEFB135', 'FAM71E1', 'TAF1', 'GMCL1', 'ASL', 'SERP1', 'TIGD2', 'MAGEC1', 'DEFB132', 'DCUN1D2', 'ARAF', 'OPN1SW', 'RANBP3', 'PDE1C', 'CCDC144B', 'PDS5A', 'PAM', 'PALLD', 'SRF', 'FANCM', 'CILP', 'CCDC59', 'EDRF1', 'CSN1S1', 'SLC1A3', 'WNT1', 'GJA5', 'HERC5', 'FCHO1', 'MTMR7', 'GOLGA8B', 'NXPE1', 'AMELX', 'CHIC1', 'LRRC4C', 'BHLHA15', 'LINC00634', 'DCAF13', 'HSPA13', 'PRRC2B', 'UBTD2', 'SYNGR1', 'VPS53', 'DPH2', 'KIAA1324L', 'PQLC3', 'SNORA53', 'FXYD5', 'TMEM175', 'TCTN2', 'RILP', 'SNX13', 'FAM206A', 'SRFBP1', 'WFIKKN1', 'SLC6A12', 'GNRH2', 'PLG', 'KRT35', 'RPS4Y1', 'TENM3', 'PGC', 'SNORA26', 'SERPINB12', 'MUC1', 'CCDC25', 'CALHM1', 'AASDH', 'DNAH6', 'ZP4', 'VGLL2', 'FGL2', 'SH3GL1', 'GLRX', 'ZNF221', 'SNORD115-37', 'NKD2', 'TULP4', 'OR4Q3', 'CRYGC', 'MME', 'PMS2P4', 'C9ORF85', 'OR2S2', 'TTTY13', 'CACNB2', 'SBF1', 'QTRT1', 'CD109', 'GABPA', 'CFHR3', 'SNORD90', 'QRICH1', 'TMEM180', 'SLC43A2', 'WHAMMP3', 'GATS', 'FAM134C', 'IL27RA', 'OR51V1', 'UBE3C', 'DARS', 'SCG2', 'ZNF20', 'RADIL', 'TMEM139', 'CDC20', 'PPIEL', 'SPIDR', 'DUSP3', 'RASSF1', 'TMEM260', 'COL9A3', 'SUMF1', 'REN', 'MOB3B', 'TBK1', 'MORN2', 'ARFIP2', 'OR51L1', 'CLDN17', 'ZC3H10', 'TCF15', 'USP39', 'SLC2A10', 'HSPA9', 'NMS', 'CADM2', 'CDR2', 'TMEM206', 'BCAS2', 'MYO3B', 'OR1B1', 'HIST1H1B', 'STAM2', 'ZNF320', 'WDYHV1', 'MEIOB', 'TMEM160', 'TANGO6', 'SERGEF', 'EPB41L4A-AS2', 'SLC45A4', 'ENTPD8', 'PP14571', 'CRLS1', 'EPS15', 'PABPC1L2A', 'SFRP2', 'TLR1', 'MIR1-1HG', 'TRAPPC8', 'MFI2', 'LMNA', 'PBX2', 'NXPE2', 'SUCNR1', 'PMS2P1', 'SPATA13', 'SETD6', 'FCGR3A', 'KCNN3', 'USP12', 'KRT36', 'OR2J2', 'RNF207', 'HIST1H3A', 'SEC61B', 'KLRAP1', 'MAPK11', 'LRRC24', 'RPGRIP1L', 'COL4A4', 'FRZB', 'INTU', 'TNNC2', 'LSM3', 'SMPD3', 'PDE7A', 'CRTAP', 'UTP3', 'NBPF7', 'SPECC1L', 'PROSER3', 'CASC10', 'DYX1C1', 'WIBG', 'ARL14', 'EIF2B2', 'ATXN7L2', 'PRDX5', 'MRM1', 'HSPA5', 'PDLIM2', 'SRR', 'RNF24', 'CIZ1', 'TRIML1', 'SCARNA8', 'DPF1', 'SF1', 'HERC1', 'MYEF2', 'GNL3L', 'SLC4A10', 'SNORD117', 'CSTB', 'JUND', 'FAM71D', 'C8ORF74', 'PM20D1', 'CCER1', 'RCN1', 'SIGLEC7', 'HAVCR1', 'PUS10', 'ERAP1', 'PCGF6', 'NKAIN1', 'HGD', 'PCBD2', 'KYNU', 'PPP1R18', 'MYF6', 'MBOAT7', 'PID1', 'NUTM1', 'PRMT2', 'ZNF137P', 'DNAJC1', 'BBS12', 'MYO15B', 'FLI1', 'ATP5E', 'CCDC90B', 'MAPK8IP2', 'SNORA79', 'GFM2', 'LINC00893', 'FAU', 'RHOU', 'CPLX3', 'PSMB4', 'SCG3', 'YIPF1', 'CLK2P1', 'COX20', 'GLI2', 'MS4A4A', 'HAS1', 'SCG5', 'ZMYM2', 'VDAC2', 'ZNF222', 'IL17RB', 'NUCB2', 'GOLGA8EP', 'INO80E', 'GRAMD1A', 'EPB41L4A-AS1', 'SULT6B1', 'SGK3', 'FTLP10', 'DHX33', 'SNORD113-7', 'TTC30B', 'CUX2', 'SYCE1L', 'RGS8', 'MAGEF1', 'ZUFSP', 'RPL39', 'KDSR', 'SLC4A5', 'PRKCG', 'C2ORF83', 'FGFR4', 'HES6', 'PIGZ', 'NASP', 'TRIM49', 'CCDC63', 'IFIH1', 'EIF5', 'TMEM254', 'PLA2G2E', 'LINC00598', 'SLC22A16', 'EPM2AIP1', 'SPARC', 'SNORD115-26', 'LAMB2P1', 'HAVCR2', 'CYSTM1', 'PHB2', 'RHBDD3', 'TTF2', 'MAP3K11', 'ZEB2', 'OR9G4', 'SLC36A2', 'IGFN1', 'DNPH1', 'LRIG1', 'THAP11', 'AEN', 'HIF1A', 'TRA2A', 'MYO1G', 'ZIC4', 'EXOSC8', 'ZSCAN20', 'ATG4B', 'OR52I1', 'RAB9B', 'CEP164', 'C12ORF71', 'ACTR1B', 'SLC20A1', 'NUGGC', 'MUC20', 'SNORD119', 'SNORD116-25', 'HTR1D', 'ELOVL2', 'SORBS1', 'RUSC2', 'TMEM116', 'LILRA4', 'RHOJ', 'TARM1', 'RASD2', 'BOD1', 'TOMM40L', 'CXCR2', 'HELQ', 'CXORF36', 'WEE1', 'SNORA4', 'TMEM25', 'PSMD1', 'DNMBP', 'PCDH7', 'SUSD1', 'TYR', 'B3GALNT2', 'HEPHL1', 'GCNT2', 'LOXL4', 'SH3BP5', 'TTTY20', 'FARP2', 'UBL4B', 'HECW2', 'MPPE1', 'HHATL', 'FES', 'LMAN1', 'TOM1L2', 'GAPT', 'STAG3L3', 'BNIPL', 'GDI1', 'NWD1', 'INHBE', 'DRG2', 'WDR63', 'MIA3', 'MON1B', 'CDH23', 'CD1C', 'KCNAB1', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 4.558674781432122e-15 NRMSE: 1.0643151805734317e-15 MAPE: 6.4426836085882954e-12 Pearson Correlation: 0.08831351245984549 Spearman Correlation: 0.08916570032045287 Coefficient of Determination: -7.290363216094802 RMSE: 1.8903785150078405 NRMSE: 0.5836122734734465 MAPE: 804.0179893880827 Predictor: ElasticNet Pearson Correlation: 0.5283050112231676 Spearman Correlation: 0.3671972158857022 Coefficient of Determination: 0.16669763408947214 RMSE: 0.6094104127995613 NRMSE: 0.14227923347020016 MAPE: 230.82220174615261 Pearson Correlation: 0.35459689838533803 Spearman Correlation: 0.2970485916283246 Coefficient of Determination: 0.08831010152295105 RMSE: 0.6268816609816096 NRMSE: 0.19353575406181026 MAPE: 148.8462209926586 Predictor: RandomForests Pearson Correlation: 0.6769455642090978 Spearman Correlation: 0.6348906073014079 Coefficient of Determination: 0.44688798472736524 RMSE: 0.4964952632795186 NRMSE: 0.11591689934617076 MAPE: 153.2464225995324 Pearson Correlation: 0.6092226739080268 Spearman Correlation: 0.598832649411225 Coefficient of Determination: 0.3660497771004724 RMSE: 0.5227446214564988 NRMSE: 0.16138576192661505 MAPE: 105.87139061472539 Protein: TP53 x_train_column_count: 1002 x_train columns: ['MARVELD2', 'OR56B1', 'OR2A7', 'OR1L1', 'MMEL1', 'ABCD3', 'SNX2', 'GRXCR1', 'GABRA6', 'TDRP', 'TRAF2', 'MOV10', 'LOC654342', 'ACAP1', 'IARS', 'AFP', 'FBLIM1', 'LCE2A', 'PRKG1', 'PAIP2B', 'C8B', 'SGK494', 'MRPL19', 'TMTC1', 'MC4R', 'RQCD1', 'PREX2', 'FGF12', 'FRMD6', 'EIF2S2', 'LINC01139', 'DNM2', 'IL13', 'RUVBL1', 'WDR74', 'GLE1', 'HMOX2', 'ANP32E', 'CYLC2', 'RNY4', 'DDX41', 'LRTM2', 'CSAG3', 'STRN3', 'C1ORF146', 'TMEM182', 'SLC40A1', 'TGDS', 'AURKB', 'KLHDC8A', 'TARBP2', 'MLLT4-AS1', 'SLU7', 'SYNGAP1', 'KISS1', 'ITGB2', 'C21ORF2', 'ATP9A', 'CYP26C1', 'TYK2', 'ZNF286B', 'ITFG3', 'TBX3', 'TMEM217', 'CGB', 'CNNM3', 'PTPRT', 'ARGFXP2', 'AGAP7P', 'RPL39', 'SLC27A3', 'LAMP1', 'EFCAB13', 'MXRA7', 'SAP30L', 'C7ORF31', 'SPANXC', 'C20ORF85', 'PDGFRL', 'OR2J3', 'FITM1', 'MBD3L1', 'KLHL22', 'JAK2', 'LRP5L', 'DUSP9', 'PAH', 'NPR3', 'SFMBT1', 'POU4F3', 'THSD7A', 'IL13RA1', 'TRAPPC9', 'LAMA3', 'MAPK12', 'FAM183CP', 'AKAP9', 'SPATA31A5', 'OR4F29', 'TCEB1', 'CDK11A', 'NLRP7', 'RETSAT', 'CCDC120', 'CCDC157', 'LINC00930', 'NKX2-2', 'TBC1D31', 'DOC2B', 'UTP11L', 'C17ORF74', 'ZACN', 'GTF3C3', 'WWP2', 'COMMD3', 'IRF2BP2', 'TATDN2', 'IQSEC3', 'NFKBIB', 'MCTS1', 'CREBBP', 'MASTL', 'NCF1', 'NOC3L', 'GPR108', 'TBC1D3B', 'ZNF580', 'LOC154449', 'IFT88', 'ZNF295-AS1', 'ARFGEF3', 'HELZ', 'C3ORF58', 'DEGS1', 'UBE2Q2', 'GNAO1', 'LINC01101', 'SNORA1', 'ARFGAP1', 'COMMD7', 'PIP4K2B', 'TSSC4', 'SF3A2', 'UXT', 'NXN', 'HEXB', 'GPR158-AS1', 'SART1', 'ZNF837', 'TRPV2', 'TADA3', 'KANK4', 'SEC24B', 'ANAPC16', 'LGI1', 'B4GALNT1', 'FAM58A', 'LPCAT2', 'CRACR2A', 'LOC642929', 'UQCRFS1', 'RIC3', 'PUS3', 'MPP2', 'BUB1B', 'C8ORF59', 'DEFB107A', 'SMTNL1', 'KCNAB2', 'NT5DC3', 'PPWD1', 'CHRNA4', 'MRPS22', 'ERICH6', 'KIF9', 'YBX1', 'SPATA3', 'HSD11B2', 'CD6', 'DRC1', 'CBX3', 'DUSP26', 'MRGPRX2', 'TMEM252', 'ATXN2', 'TEX9', 'HSPA1B', 'CRYBB1', 'VPRBP', 'WNT9A', 'MRPL3', 'ATP7B', 'GYPA', 'ARAP1', 'KRT84', 'MMP23A', 'CSNK1E', 'SNORD1C', 'MED8', 'TOP1P2', 'TRERF1', 'RCE1', 'RPL23AP64', 'TRMT10B', 'ZNF117', 'C10ORF99', 'VAV3', 'DKKL1', 'POLB', 'TMED10P1', 'SLC36A1', 'TRIQK', 'ROPN1L', 'RLN2', 'CASP9', 'DNAJB9', 'ADAM18', 'SHISA4', 'CFL1', 'PDE8B', 'GPR180', 'UBR1', 'THRA', 'IL12B', 'ZNF607', 'CLP1', 'IL1F10', 'CPN1', 'NANOS2', 'BTBD6', 'CUL2', 'SESN2', 'GJA5', 'RPP25', 'LAMB1', 'UGT2B4', 'SNORA61', 'MRPL42P5', 'KSR1', 'CLDN25', 'PRSS38', 'MMP2', 'RBM24', 'ITFG1', 'CYP1B1', 'MS4A7', 'CHURC1', 'PVRIG', 'RUNX1T1', 'KRTCAP2', 'SIKE1', 'HSPA2', 'TF', 'C16ORF62', 'PLAGL1', 'SARS', 'PPP1R35', 'MDS2', 'CCDC62', 'FAM156A', 'CCS', 'SLC5A11', 'RIN1', 'CYTH4', 'SNORD123', 'C7ORF61', 'CEL', 'LINC00115', 'KRTAP10-8', 'TOX', 'DENND2D', 'SLC4A1AP', 'ITPK1-AS1', 'C14ORF132', 'KCNMB4', 'UNK', 'SH3GL1', 'PHACTR3', 'HSD3B1', 'ANGEL1', 'SP5', 'PRR26', 'DCHS2', 'DSC2', 'ANKFN1', 'MC5R', 'ZNF133', 'EIF6', 'DCAF4', 'HIATL2', 'LSP1', 'COL23A1', 'MOAP1', 'P4HTM', 'ARHGAP10', 'CHAT', 'NAA11', 'FKBP8', 'PRSS50', 'P2RY4', 'ARL3', 'MAGEA6', 'EXOC3L1', 'OVGP1', 'TMEM47', 'TROVE2', 'HS6ST3', 'WDR20', 'CASQ1', 'PIGV', 'WFDC1', 'PNKD', 'SASH1', 'C20ORF27', 'FAM228B', 'LINC00469', 'MED25', 'DIDO1', 'MAPK6', 'CST11', 'HEBP1', 'MAD2L2', 'GLTSCR1L', 'GIF', 'ASH1L-AS1', 'DPRXP4', 'NUP188', 'PDXK', 'DDX3X', 'LINC01184', 'TTF2', 'SLC15A4', 'CXCL6', 'CROCCP3', 'RBM15', 'APCDD1', 'NOL4L', 'IGFN1', 'HNRNPA1L2', 'RASSF9', 'RNF7', 'CALCOCO2', 'OR12D3', 'MRPL57', 'SLC25A44', 'FOXL1', 'CD1B', 'MAN1B1-AS1', 'HIST1H2BJ', 'SURF2', 'NUP37', 'C17ORF67', 'IDUA', 'PRSS57', 'ZNF526', 'A4GALT', 'SPAG4', 'NHLRC4', 'FN1', 'PMS2P4', 'SLC33A1', 'SEC11C', 'NBPF1', 'PPIG', 'TRNP1', 'MYO18B', 'PNCK', 'S100A12', 'NOS2', 'DHRS7', 'VPS13D', 'PELI2', 'SPP1', 'IL17RE', 'ANKRD20A20P', 'NPB', 'DSG1', 'PEX2', 'LPAR4', 'SPEN', 'ROR1', 'NBPF3', 'CCDC83', 'ZNHIT1', 'CCDC12', 'LINC01420', 'GTF2B', 'RFC1', 'FLJ37201', 'DNAH10', 'GATS', 'C2ORF15', 'TRHDE', 'C5ORF49', 'CLDN23', 'SCUBE3', 'SHKBP1', 'NOC2L', 'DUSP10', 'RBP2', 'IVL', 'KLHL42', 'PRUNE', 'ZDHHC5', 'TDRD7', 'PLEKHD1', 'YOD1', 'PAFAH1B2', 'C9ORF170', 'FAM127C', 'TIE1', 'PRKAR1B', 'DALRD3', 'CYB5D2', 'NRG2', 'PRKD3', 'HERC2P2', 'NALCN', 'MRGBP', 'BTC', 'CHML', 'FLT1', 'CEACAM21', 'ZNF556', 'STRN', 'TTL', 'SLC51B', 'GPR88', 'HGFAC', 'DNAJB3', 'BEND2', 'ALCAM', 'KIF20A', 'CD4', 'PPFIBP2', 'LCN8', 'BLCAP', 'PQLC3', 'CLSTN2', 'ADAM11', 'COL24A1', 'RPL37', 'OR52E6', 'C2CD4A', 'PRKCD', 'CCDC112', 'OR51B4', 'CBX6', 'HAND2-AS1', 'PARD3B', 'ZNF497', 'PDIA3P1', 'TNFRSF10C', 'HINT2', 'SNORD6', 'PKD1L1', 'C5ORF38', 'ZWINT', 'MRAP', 'BMP1', 'PTH2', 'ACTR3C', 'C14ORF177', 'KCNC2', 'PP12613', 'NIT1', 'EPB41L5', 'YBX2', 'SNORD26', 'CLK4', 'ZFAT-AS1', 'SLC36A4', 'POU6F2', 'FAAH2', 'GPR161', 'GRAMD3', 'HIST1H2AM', 'ITPKC', 'RIMS1', 'CEP63', 'DKFZP779M0652', 'DNAJC30', 'CHST2', 'NDUFA3', 'HNRNPU', 'FUT10', 'RHOG', 'TWF2', 'ZFPM2', 'KIAA1586', 'CENPBD1', 'FXYD7', 'CACTIN', 'CD3EAP', 'MPO', 'NECAB1', 'DCT', 'GABARAPL3', 'PRDM14', 'STMN1', 'OR52W1', 'FMNL2', 'LYSMD3', 'TCOF1', 'PARVG', 'CX3CR1', 'LRRK1', 'PPP6C', 'ILDR1', 'LOC100132111', 'ZNF34', 'CCDC51', 'FAM174A', 'ZCCHC16', 'CDRT15', 'FAM19A1', 'LSM8', 'ZNF106', 'FBXO33', 'SULF1', 'IL22', 'ZNF655', 'TMSB4XP8', 'LOC728024', 'BOP1', 'SMARCD2', 'RAB6C', 'GFPT1', 'HDGFL1', 'ADPRHL1', 'POMC', 'JDP2', 'FNIP1', 'SRP14', 'OR2T11', 'CANX', 'CGB7', 'INSM2', 'TNNI1', 'TISP43', 'NOA1', 'FCGR3A', 'HAPLN2', 'VWA2', 'PRB4', 'FAM109B', 'RPL26', 'ATP6V1A', 'ACTR3BP2', 'RAB40AL', 'ATP1B1', 'ANKEF1', 'NANOG', 'PDLIM2', 'ATP5C1', 'TAB2', 'MYO1G', 'KALRN', 'NOG', 'CD276', 'SNORD81', 'ALX4', 'KIF21A', 'TJP3', 'ATP2B4', 'UNC45B', 'DNMBP', 'HMGXB3', 'SYNPO', 'OR52A5', 'IGF2R', 'LINC00452', 'SELL', 'CTDP1', 'RAC1', 'NAA15', 'MED1', 'CCDC82', 'TBL1XR1', 'TMEM229B', 'HMGB3P1', 'MYCNOS', 'WDR36', 'NAV1', 'TBRG4', 'SPATA18', 'PRPF19', 'OCEL1', 'ESM1', 'PRH2', 'LOC729609', 'PBOV1', 'ANXA11', 'MAFG-AS1', 'SNORD24', 'C17ORF47', 'CSF3R', 'KDM3A', 'FREM1', 'RPRD1B', 'RGS10', 'SMURF1', 'RANBP3L', 'OSGEPL1', 'MSGN1', 'LIMK1', 'CYP39A1', 'CCDC124', 'TNK2', 'CACNB2', 'HIST1H3G', 'ADRA1D', 'SSX4', 'SLC4A4', 'BCL2L10', 'TMEM41A', 'ZEB1', 'MDM4', 'MSN', 'ADGRG1', 'ART3', 'MORN1', 'GOLGA8B', 'FAM184B', 'IQCF5', 'SERPINA11', 'OR3A3', 'MRPS23', 'SCARNA1', 'TIMP4', 'AP3D1', 'FZD7', 'CACNG5', 'HLA-DRB1', 'BOK', 'GGT5', 'AOC2', 'CAPN9', 'EIF2S3', 'NABP2', 'SYNE2', 'SPRTN', 'IFNA8', 'SLC35A5', 'OR2T33', 'ELOVL2', 'GYG1', 'FLJ13224', 'PSTPIP1', 'GOLGA2P5', 'FBXL8', 'DSE', 'IRF2', 'ZFP69', 'FSTL1', 'SNAR-G2', 'CSTL1', 'ZNF224', 'SCAF1', 'RNF157', 'CNNM2', 'ESPN', 'ZNF584', 'LOC644669', 'OLMALINC', 'DOCK6', 'CNBD2', 'GUF1', 'KRT33B', 'ALDOB', 'OR2M4', 'PRG3', 'OR5K2', 'NDUFAF4', 'MRPL33', 'PEX7', 'NIPSNAP3B', 'FZD9', 'P2RX1', 'APMAP', 'PEX11B', 'C17ORF89', 'ALPL', 'FOXJ2', 'AFAP1L2', 'CNOT3', 'TEX28', 'APPL2', 'NXT1', 'VTRNA1-3', 'CXADR', 'ADGRB2', 'DHRS2', 'DNER', 'TMEM257', 'KCNG4', 'POU3F3', 'TSPYL5', 'SIGLEC9', 'SNORA8', 'KIAA1328', 'LINC01134', 'DACT3', 'SON', 'ZMAT1', 'TRAM2', 'ZNF418', 'PHLDA2', 'DTX1', 'SKA3', 'MSRB1', 'UNC119', 'TAF7', 'LCLAT1', 'NFKBIZ', 'SLC22A4', 'NUP210L', 'ZNF195', 'LCORL', 'LRRC75B', 'RBP7', 'CYP46A1', 'C19ORF45', 'SCARB1', 'SFMBT2', 'MTR', 'CD44', 'ZNF484', 'HLF', 'DCBLD1', 'CDCA7L', 'CD68', 'PON3', 'NDNF', 'TRIM29', 'USP29', 'TNFAIP2', 'C14ORF105', 'SEPT7P2', 'KIF1A', 'LINC00113', 'TDH', 'PLA2G16', 'PSORS1C1', 'CROT', 'SPATA6', 'IFT122', 'LINC00883', 'JSRP1', 'GDF5', 'SHISA9', 'SYCP3', 'IDE', 'DEFB109P1B', 'HES7', 'SMIM10L2A', 'ANKRD46', 'MEX3A', 'SDC1', 'WIPF2', 'MAGEA4', 'TBX20', 'SPINK14', 'ECSIT', 'EHD1', 'TRIP6', 'LINC00202-1', 'LPAR6', 'IRGQ', 'AKAP8', 'KIF4A', 'ABHD8', 'MIEF2', 'CLDN3', 'GNG12', 'ZNF337', 'PCDH7', 'NUCB2', 'LINC00893', 'SCN10A', 'CTSC', 'NAA25', 'SEMA4C', 'GSTM2P1', 'RBP1', 'KCTD12', 'PDCD6IP', 'PSMG3-AS1', 'HEATR3', 'PRICKLE1', 'STYXL1', 'ATP5A1', 'RPS3A', 'HDAC2', 'ATP6V1G2', 'ATP1B4', 'ZNF146', 'SNAI1', 'TBX2', 'DTD2', 'INO80', 'KHDC3L', 'NLRC4', 'ARPP19', 'DHFRL1', 'NYAP1', 'UXS1', 'LRRC31', 'XKR3', 'SAXO2', 'SNORD88B', 'CRYBA1', 'ZBTB42', 'LYAR', 'CYSTM1', 'KRTCAP3', 'CYHR1', 'LINC00482', 'TATDN1', 'FUT1', 'TVP23B', 'RGS12', 'R3HDM4', 'CGNL1', 'RMST', 'RPLP0', 'RFNG', 'DOCK8', 'ITPR2', 'DUOX1', 'LINC00905', 'TRPV5', 'TEKT5', 'ENO3', 'SERPINC1', 'HCFC1R1', 'SIGLEC10', 'PHF1', 'PCM1', 'CCDC66', 'CDK3', 'PP7080', 'ZNF749', 'TNS3', 'LRRN3', 'TBC1D13', 'MED12L', 'XAGE3', 'IGF2-AS', 'GYS1', 'HYKK', 'RPP25L', 'RPIA', 'METTL13', 'MED13', 'PLSCR1', 'RCAN1', 'TNFRSF12A', 'GPR32', 'SLC35G1', 'FAM188B', 'TSPAN18', 'CRYAB', 'MCAT', 'PTPRA', 'FAM20B', 'MSRB3', 'LRP4', 'FOXN3', 'TYMP', 'PLA2G10', 'ZNF330', 'TNFRSF6B', 'ZNF223', 'CSHL1', 'SHC1', 'SMOC2', 'RALA', 'RBL2', 'ST7-OT4', 'PROX1', 'MUCL1', 'FAM134B', 'SLC35G6', 'LARP1B', 'ATP2B1', 'ARNTL', 'CXCR1', 'ZNF321P', 'HK3', 'F7', 'UBE2NL', 'ZNF230', 'NHLH1', 'SOX3', 'OGFOD2', 'ATG7', 'SLC45A2', 'KRT18P55', 'KRT35', 'H2BFM', 'BMP3', 'GYPC', 'PTPN6', 'CDK20', 'AFF3', 'LINC00471', 'GJD4', 'SNORD116-3', 'INHBA', 'CNFN', 'SPATA31D5P', 'SLC7A9', 'ARID4A', 'FSHB', 'ARSD', 'BGN', 'AP1G2', 'CBWD6', 'PDLIM1', 'ZNF473', 'PYGL', 'TMEM41B', 'DKK3', 'ZNF213', 'ZNF69', 'BNIP2', 'KDM8', 'PGM5', 'ACIN1', 'CSNK1G3', 'PTBP2', 'TRIM24', 'FABP5', 'PDCL3', 'ATIC', 'RPL23AP53', 'CYBRD1', 'RPS11', 'PSMA3', 'P2RY10', 'EML6', 'ZSWIM5', 'METTL6', 'PROCA1', 'WDFY1', 'DFNB31', 'FCHSD2', 'C12ORF50', 'RPSA', 'SNORA75', 'C17ORF98', 'WDR41', 'RORC', 'ATP8B1', 'HSPBP1', 'STRIP1', 'ZNF566', 'OR4N3P', 'TMTC3', 'FAM76A', 'OGDH', 'ZNF92', 'COG1', 'CYP2R1', 'SAMHD1', 'RPLP1', 'LRRTM1', 'TTC37', 'PIGN', 'OR8B12', 'WIPI1', 'CNKSR1', 'SRXN1', 'LIN7B', 'ACOT12', 'MCUR1', 'MAGEB16', 'KIAA1551', 'IL1B', 'CELSR2', 'ZNF470', 'CPPED1', 'HDC', 'DNAJC24', 'TMEM178A', 'SEC16A', 'MSL3P1', 'APBB1', 'F2R', 'LOC441601', 'MRPL34', 'NUTM2F', 'MOSPD2', 'ZNF512B', 'TNFSF11', 'RPS6KA6', 'NMUR1', 'GLO1', 'GMNN', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.213177060142185e-15 NRMSE: 5.3188585920264e-16 MAPE: 4.40144824886777e-12 Pearson Correlation: 0.36794155679561835 Spearman Correlation: 0.3786506066160426 Coefficient of Determination: -1.3111503190098643 RMSE: 0.6543877055063593 NRMSE: 0.24402063829389647 MAPE: 1357.1525066724607 Predictor: ElasticNet Pearson Correlation: 0.4563715909579608 Spearman Correlation: 0.4572435222236294 Coefficient of Determination: 0.1661435262588029 RMSE: 0.4110238485463736 NRMSE: 0.09878006453890258 MAPE: 594.9232180856626 Pearson Correlation: 0.3793780526598623 Spearman Correlation: 0.44249180164341206 Coefficient of Determination: 0.11447183409951966 RMSE: 0.40506267305228594 NRMSE: 0.15104753832556556 MAPE: 301.44235877910546 Predictor: RandomForests Pearson Correlation: 0.6732509318900304 Spearman Correlation: 0.5676360771366868 Coefficient of Determination: 0.37900952738946503 RMSE: 0.35470216358391243 NRMSE: 0.08524445171447068 MAPE: 586.3102509292356 Pearson Correlation: 0.4977100973232137 Spearman Correlation: 0.43438197483759156 Coefficient of Determination: 0.22709953710438213 RMSE: 0.37842761301911715 NRMSE: 0.14111534629995157 MAPE: 390.1009915734149 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['RCCD1', 'LOC100129534', 'SEMA6A', 'PLA2G4E', 'SLC12A8', 'HEATR3', 'EAF2', 'PPBPP1', 'DEFB115', 'HHAT', 'ESAM', 'TNFRSF6B', 'TMEM106B', 'TNNT3', 'DNAJB6', 'TCN2', 'AGRN', 'MITF', 'PUSL1', 'RFX5', 'USP46', 'TRAPPC1', 'HTR1B', 'SNORD116-23', 'EDARADD', 'ZHX1', 'MICAL3', 'DNAJC17', 'CEACAM8', 'ATRN', 'KCNE5', 'KLHL18', 'MRPL45', 'GAL', 'TCP1', 'ZKSCAN8', 'FOXP1', 'CTBP1-AS2', 'OR10H5', 'MSMO1', 'CD53', 'PAN3', 'KLK1', 'FLT3LG', 'TEX36', 'AOC3', 'SSX5', 'ASTL', 'TRHDE', 'TAS2R40', 'CFC1B', 'ANKRD13B', 'PRAMEF17', 'LPAR5', 'PLEKHG1', 'PPP2R1B', 'MCM10', 'DRG2', 'LVRN', 'CDC26', 'INO80B', 'HBBP1', 'AJAP1', 'SELP', 'SNORD63', 'ARHGAP6', 'LTBP2', 'OR51E1', 'HOOK1', 'SCN5A', 'OR2C1', 'SIPA1L1', 'CLEC14A', 'FOXB2', 'ITPK1-AS1', 'LINC00896', 'MSRA', 'SLC44A3', 'MTHFD2', 'LRRTM2', 'SNORD98', 'SMARCE1', 'SSH2', 'ITGA3', 'SNRNP25', 'RPS18', 'CDV3', 'C19ORF71', 'CHD5', 'IL1A', 'RUNX1T1', 'CIB2', 'SEPT2', 'HCRTR1', 'SNTG2', 'RSPH9', 'DCAF8L2', 'WDR31', 'UGT2A3', 'OR10T2', 'ANKRD54', 'PAGE4', 'TOMM5', 'CPXM2', 'LINC00282', 'ZKSCAN4', 'SCAF8', 'CLCA3P', 'PQLC3', 'ZNF281', 'EXO1', 'NUTM1', 'PCDHA6', 'MYL12B', 'RAB21', 'CCDC173', 'DLG5', 'CDC14A', 'DET1', 'MAP4K5', 'IGFL2', 'RCHY1', 'OR5AN1', 'ATAD1', 'TCEB3B', 'DAPK1', 'PLEKHG3', 'RC3H1', 'GPR18', 'SNX19', 'ZBTB3', 'NUDCD1', 'SMNDC1', 'LYRM4', 'RNF186', 'TMEFF2', 'ANLN', 'CDHR2', 'FAM3D', 'OR3A3', 'USP3', 'C2CD2L', 'GID8', 'RBM26', 'TMEM101', 'C10ORF131', 'SNORA6', 'RXFP4', 'KLF10', 'KLLN', 'TMCO3', 'DMRT2', 'OR56A5', 'SOX3', 'BLOC1S2', 'FAM189B', 'TRIML1', 'ITCH', 'SDHD', 'GRAPL', 'TRPC2', 'PAK7', 'LBP', 'BTD', 'CCNI2', 'CREBRF', 'C8A', 'ACOT6', 'PGBD5', 'IGIP', 'LYN', 'POM121L12', 'RNF146', 'SMTNL2', 'FAM229B', 'DAP3', 'HSPH1', 'FKBP10', 'ECE2', 'HS6ST1', 'GNAT1', 'THAP8', 'CELF6', 'AP3S1', 'CDH9', 'C2CD4B', 'KRTAP5-4', 'LINC00200', 'PPM1N', 'LINC01018', 'TMEM59', 'NMNAT3', 'NFKBIA', 'MSX2P1', 'C22ORF46', 'NOTCH2', 'TMOD1', 'PAF1', 'SNORA40', 'RSPRY1', 'ADGRF2', 'ENOX2', 'POP5', 'MMS19', 'POLM', 'BAMBI', 'TGFB3', 'TMEM56', 'ZYG11B', 'BTBD6', 'DBNDD1', 'CEP41', 'KANK4', 'TUBB', 'COMMD3', 'GYG1', 'LRR1', 'CX3CR1', 'ZNF132', 'CORO7', 'CTSD', 'EYA1', 'KLHL26', 'SUN5', 'TTC41P', 'ZNF232', 'TKT', 'ZMIZ1', 'SMIM10', 'FAM173A', 'ATP5G1', 'SURF4', 'RPL8', 'RRAGB', 'PLET1', 'AMDHD1', 'SIDT1', 'AHSA1', 'STRBP', 'LACTB2', 'JOSD1', 'PPP1R3F', 'YIF1B', 'NR3C1', 'SATB2', 'PFDN4', 'CLUH', 'ZNF682', 'LIN54', 'ACTR3C', 'SIRPB1', 'FOXR2', 'FAM53C', 'FZD7', 'NTSR1', 'SCOC', 'CRMP1', 'PLK2', 'HNRNPCL3', 'TMSB15A', 'KALRN', 'IGSF11', 'ASIP', 'CCDC141', 'BLOC1S4', 'P2RY11', 'C10ORF111', 'OR7E24', 'UQCRB', 'ZNF837', 'CCDC64', 'LRRC18', 'MSS51', 'LCN9', 'PF4V1', 'BRD7P3', 'OTOS', 'SPAG16', 'KLHL15', 'DHRS11', 'CELA3B', 'LAX1', 'SEC14L3', 'LTF', 'PFDN5', 'KRTAP20-1', 'SLC28A2', 'SNORD115-26', 'LENG8', 'ATP5G2', 'MCEE', 'LOC100270746', 'CDK10', 'LRRC39', 'OR2A14', 'CPSF1', 'CNTN6', 'NLRP2', 'PEX12', 'TCTEX1D4', 'IFNA1', 'INTS12', 'LILRA4', 'LINGO4', 'LCORL', 'RPL28', 'KIAA1549L', 'GJB3', 'SIRPD', 'PPP2R2D', 'ZNF480', 'TRIM46', 'EIF1', 'OR4K14', 'ZNF497', 'DUSP3', 'SLC36A4', 'ANKRD12', 'CPSF6', 'AKAP7', 'KNG1', 'SPOCK3', 'CCBE1', 'HTATSF1', 'ELAVL3', 'GPR174', 'CAMK1G', 'KCTD21', 'QSOX1', 'PADI1', 'KRT38', 'TMEM55B', 'SLC7A2', 'HMX3', 'RBM4B', 'APCDD1', 'ERMARD', 'CDK19', 'VCX', 'SLC16A13', 'TAS2R14', 'SPINK9', 'INTS4P1', 'ANXA11', 'LINGO3', 'HMP19', 'ARL13A', 'RBM6', 'DGCR8', 'OBFC1', 'CTGF', 'CCL17', 'DIP2A', 'KPNA7', 'PDYN', 'ZNF280D', 'ADGRA3', 'RALGPS1', 'AKT1', 'NWD2', 'ABCA4', 'HGF', 'TP53AIP1', 'SEPT8', 'LINC00319', 'ERAP2', 'ABCA9', 'C11ORF45', 'PPP1R1A', 'SNCB', 'CSDC2', 'ROPN1', 'PROM1', 'CRYGB', 'AQP4-AS1', 'FCGR1A', 'DKFZP434L187', 'TSNAX-DISC1', 'PKIG', 'DAXX', 'MYO5C', 'PITPNB', 'HIST1H2BK', 'OR9A2', 'KCNH8', 'R3HDM1', 'BMS1P20', 'KIF1B', 'ZNF37A', 'SETD6', 'C14ORF169', 'KRTAP6-3', 'PRDX6', 'GUK1', 'ATP6V1A', 'FOLR2', 'SNAR-A2', 'WIZ', 'SNW1', 'DRICH1', 'MPLKIP', 'PAPSS2', 'CMC2', 'PLXND1', 'LGALS7B', 'SNORA45A', 'C17ORF67', 'FAM214B', 'IP6K3', 'NDUFAF5', 'MKRN3', 'BBS12', 'UNC93A', 'PKHD1L1', 'LRRC66', 'LOC283922', 'GAGE12J', 'FLJ37201', 'LOC654342', 'STAB1', 'ARL16', 'VPREB1', 'ZBTB42', 'SNORD114-6', 'PRNP', 'HSD3B7', 'TOB2P1', 'AKR7A3', 'MAMSTR', 'RANBP1', 'FCRL3', 'CNTD2', 'SLFN11', 'CAPG', 'MLF2', 'CD207', 'SYP', 'ATRX', 'MTMR2', 'SLC52A1', 'DCDC2', 'EXD1', 'COX18', 'INSL3', 'RNF13', 'CENPM', 'GSTT2', 'ASCL3', 'KCTD4', 'LINC00894', 'ANXA2P2', 'TNFRSF11B', 'TCERG1', 'NOTUM', 'BCL10', 'NUPR1L', 'USH1C', 'HSFX2', 'SLC44A5', 'CCDC28B', 'TOR1A', 'SRRM4', 'PPM1L', 'ATP6V1C1', 'FBXL16', 'C12ORF42', 'DCST1', 'ZNF225', 'C14ORF132', 'FAM122C', 'GPR37', 'GCNT1', 'SPRY2', 'GOLGA6L6', 'ANAPC13', 'UBE2V2', 'SOCS7', 'FAM160B2', 'SPIN4', 'OR2V2', 'NRXN1', 'SLC25A18', 'POLG', 'MYOF', 'ADGRA2', 'RD3', 'HAND2', 'NOL10', 'CLEC11A', 'CERS6', 'TYMSOS', 'MRGPRE', 'AIPL1', 'PCBD1', 'SH3RF3', 'AMICA1', 'ISX', 'OTOA', 'CHRNA7', 'ATP6V1B2', 'CYP2B6', 'C10ORF25', 'LYST', 'SSX9', 'TMEM79', 'WDR78', 'MDP1', 'ZNF473', 'SLC2A4RG', 'RPPH1', 'TRIQK', 'NRG2', 'GIMAP4', 'TRAF6', 'EPS15', 'XDH', 'TBXA2R', 'ATP10A', 'P2RY4', 'SLC22A24', 'KRTAP9-2', 'S1PR4', 'C6ORF141', 'LINC00895', 'HDAC10', 'ZBTB10', 'WARS2', 'PIWIL4', 'SECISBP2', 'MED9', 'C11ORF95', 'TBL3', 'G6PC2', 'HOXB5', 'FIP1L1', 'KRT12', 'BID', 'PTH', 'C11ORF84', 'PRDM13', 'SH2D3C', 'SGPP1', 'RBBP8', 'MCM2', 'BCL7B', 'PDGFRA', 'CENPP', 'SNORD91A', 'ZFHX3', 'ADAM10', 'IFI27', 'AARSD1', 'TNFRSF14', 'TBC1D3B', 'GJC1', 'MEOX1', 'PITPNM1', 'FAM89B', 'NYAP1', 'CDH23', 'SLC39A2', 'SREK1', 'BPIFA2', 'NUBPL', 'KMT2E-AS1', 'FAM120C', 'RAPGEF5', 'DMTN', 'WDPCP', 'SNORA70B', 'NRIP2', 'LYZL2', 'MXD4', 'CYFIP2', 'C8ORF46', 'SSR1', 'MYO5B', 'ZNF175', 'C14ORF79', 'OR10S1', 'LDLRAD4', 'TBC1D13', 'ZNF142', 'EVC2', 'SLC6A15', 'ARGLU1', 'CMTM6', 'GNA11', 'DENND1A', 'KRT83', 'BTN2A3P', 'PPWD1', 'RNF112', 'SYNM', 'RGR', 'EMC3', 'CCDC74A', 'HEPN1', 'EGOT', 'FLJ33360', 'TCEAL6', 'ANGPTL2', 'BCS1L', 'PPP6R2', 'VPS28', 'B3GNT8', 'LDLRAD2', 'ZNF177', 'KRT81', 'CACNA1C', 'DHX15', 'UTP20', 'GTPBP3', 'IQCC', 'DNAJC19', 'ZNF768', 'IGFBP7', 'DIS3L2', 'GAGE2D', 'ABRA', 'GPR141', 'CACNB3', 'COQ10A', 'MNDA', 'FBLN5', 'ALOX15', 'RHBDD3', 'ALOX12', 'ZNF585A', 'NUGGC', 'GRIN3B', 'GPR157', 'MT1X', 'TNC', 'ANP32A-IT1', 'XYLB', 'CTXN2', 'MMP23A', 'TMEM256', 'AHCTF1', 'LGMN', 'STBD1', 'RPS4Y1', 'RAB8B', 'RDH12', 'XIRP2', 'DDX5', 'SARS2', 'NPAS4', 'HIST1H4C', 'FAR2', 'ZNF436', 'HNRNPK', 'KANSL1', 'SLC24A2', 'PLEKHO2', 'PRSS53', 'MRAP2', 'SPPL2A', 'OR2A4', 'CHRNE', 'HENMT1', 'SENP3', 'ZDHHC23', 'HPS3', 'SPSB1', 'UBN2', 'HLA-DRB1', 'GPRIN3', 'TMEM134', 'GNG13', 'CD63', 'GARS', 'SDPR', 'KLRK1', 'GOLGA6L1', 'ZNF335', 'SPON1', 'SIRPG', 'SNORD114-31', 'SPOCK2', 'KCNH7', 'SENP6', 'CPO', 'PTDSS1', 'RHPN2', 'LYG1', 'MRGPRX1', 'GORASP1', 'CEACAM3', 'ZNF331', 'NKIRAS2', 'TADA1', 'NT5DC3', 'SDR42E1', 'GNRHR2', 'PLEC', 'ATP2B4', 'HAR1A', 'UBE2J1', 'LINC00883', 'PTER', 'UTP6', 'AOAH', 'RNF180', 'PARP8', 'BRIP1', 'ATP13A1', 'DCX', 'GRIK1-AS1', 'GSTTP1', 'C1ORF122', 'DNAJC3', 'FOXA1', 'PCID2', 'SARAF', 'PUS1', 'ZNRF3', 'ADAM7', 'CCL13', 'PLK4', 'NGRN', 'SLC2A3', 'RAD21L1', 'ZCCHC14', 'CT47A2', 'CYP2B7P', 'FRG1B', 'NXPH1', 'STX16', 'FTL', 'ZNF311', 'ARRDC2', 'FBP2', 'POU3F1', 'TUSC7', 'CRSP8P', 'BIRC6', 'KIAA1522', 'RABL2A', 'TFIP11', 'SPI1', 'VASH1', 'PFDN6', 'JUN', 'SNORD48', 'TLDC2', 'ARHGAP44', 'SLC5A12', 'PLA2G3', 'SKA3', 'KIAA1024', 'DCD', 'SIPA1L3', 'CASP8AP2', 'LOC148696', 'CEP68', 'ASPH', 'PHOX2B', 'BASP1', 'CHCHD5', 'CHIT1', 'GNS', 'GUCA1A', 'PSME2', 'CHD4', 'ST3GAL5', 'CDK2', 'SUPT5H', 'LAMTOR3', 'CEP44', 'FAM47E', 'HINFP', 'SNORA7B', 'LOC100130691', 'SAMD5', 'NDUFS5', 'PDE4C', 'C14ORF177', 'TCEAL2', 'ATL2', 'IFNW1', 'SNORD114-9', 'NFATC4', 'LOXL2', 'BMPR1A', 'TMA7', 'KCNMB2', 'DUS4L', 'LINC00174', 'TCTN3', 'TAS2R46', 'FGF8', 'LRRC56', 'SYT15', 'SNAI2', 'KATNA1', 'LOC113230', 'CCDC106', 'LINC00899', 'METTL1', 'PIK3R3', 'PRAMEF9', 'KIAA1324', 'ZNF428', 'NXF2', 'SLC38A8', 'RDH16', 'CRTAM', 'SNORD115-22', 'BRD3', 'MED30', 'MED1', 'DNAAF1', 'NUDT16P1', 'FAM170A', 'CACNA1S', 'LTB', 'POU5F1B', 'OSBP2', 'PRR12', 'GTSF1', 'PCBP4', 'FGG', 'C19ORF53', 'ERICH3', 'TEAD3', 'C16ORF58', 'POLR2A', 'HYAL3', 'PPP1R32', 'C1QTNF4', 'PDCL2', 'MT2A', 'CYP4F11', 'SMCHD1', 'MAGEA1', 'GOLGA2P10', 'OSM', 'HSP90B1', 'RHOU', 'ZNF687', 'TMEM205', 'PCDH8', 'OLAH', 'TMEM2', 'TMED6', 'PEX11B', 'PRUNE2', 'ASIC5', 'CTU1', 'SRSF11', 'ENTPD5', 'CWC15', 'MAEL', 'OTULIN', 'RAB5C', 'PPP2R5B', 'HCFC1R1', 'EIF5A', 'ACOX3', 'LBX1', 'ZSCAN20', 'SRD5A2', 'ST3GAL3', 'MYOD1', 'NADK', 'CEP128', 'C10ORF53', 'GPHB5', 'CENPF', 'PER3', 'VHL', 'KIF13B', 'KCNIP4', 'CUEDC2', 'SMCO4', 'WRN', 'WDR47', 'TUBB1', 'GNAL', 'CTTNBP2', 'SPATA33', 'TAX1BP1', 'PRORSD1P', 'SSNA1', 'TBL1Y', 'RABEP2', 'COPE', 'ASF1A', 'CTDP1', 'NLE1', 'VPS52', 'LRRC17', 'NHEG1', 'FRMD4B', 'BLNK', 'PRKG1', 'C1ORF194', 'WDR27', 'MOB3B', 'KIR2DL4', 'RPL38', 'NEK2', 'RGS3', 'C1ORF186', 'HCRTR2', 'FGFRL1', 'FBXW7', 'JUNB', 'LHX2', 'HMGN1', 'F10', 'PKD1', 'PRR27', 'CCM2', 'ARHGAP42', 'DSCAML1', 'RBM28', 'ENAH', 'SCLT1', 'CD55', 'RGS16', 'CHST6', 'RSPH3', 'SNORD4A', 'COX19', 'NXPH4', 'UBLCP1', 'SEC22C', 'NPAS2', 'ZDHHC16', 'MAGEE1', 'CST9L', 'PRAME', 'ZNF804A', 'ZNF236', 'SMS', 'PDF', 'SMYD4', 'NTN4', 'IL13RA2', 'CLEC19A', 'FOXN3', 'TENM2', 'FOXM1', 'FBXL19-AS1', 'SENP2', 'SRPX2', 'TMEM87A', 'CLIC2', 'PDCD1LG2', 'SPRR4', 'DMWD', 'PRB3', 'EIF4ENIF1', 'RNF7', 'ZNF678', 'PLA2G10', 'TACR2', 'C3ORF30', 'TIE1', 'CCDC80', 'LCE3D', 'LOC151174', 'CD3EAP', 'NR1H3', 'TPCN2', 'HPRT1', 'CFHR5', 'ZNF57', 'MEGF6', 'SCARNA16', 'SLC50A1', 'CCDC27', 'ZNF544', 'KCND1', 'KCNK2', 'SLC30A9', 'PRELID2', 'HOTAIR', 'ATP5G3', 'DUSP4', 'TM9SF1', 'KRTAP10-5', 'NAGLU', 'C9ORF41', 'MYL2', 'SNORD114-20', 'KRT80', 'KLF4', 'TCAM1P', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.1885569887525506e-15 NRMSE: 6.271748601008164e-16 MAPE: 1.7479773928597674e-12 Pearson Correlation: 0.17017395666406285 Spearman Correlation: 0.15953565505804312 Coefficient of Determination: -2.5095851263681834 RMSE: 1.1483317514769655 NRMSE: 0.3754067643522068 MAPE: 1349.4205658668975 Predictor: ElasticNet Pearson Correlation: 0.5200323326074713 Spearman Correlation: 0.5108513385612702 Coefficient of Determination: 0.1700862126441971 RMSE: 0.7007358231304044 NRMSE: 0.1378315938494108 MAPE: 382.60412585105394 Pearson Correlation: 0.24042841912935262 Spearman Correlation: 0.22105263157894736 Coefficient of Determination: 0.04985020941451512 RMSE: 0.5974967142090671 NRMSE: 0.19533058099613163 MAPE: 1782.15153477069 Predictor: RandomForests Pearson Correlation: 0.6335400794982822 Spearman Correlation: 0.6141457909079158 Coefficient of Determination: 0.3222520043576357 RMSE: 0.633245265268094 NRMSE: 0.12455650378994769 MAPE: 308.23441713049124 Pearson Correlation: 0.15216320189545027 Spearman Correlation: 0.14522624970386167 Coefficient of Determination: -0.04521037268509076 RMSE: 0.6266735118004818 NRMSE: 0.2048689109812291 MAPE: 1605.7190323368773 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['TRMU', 'TULP4', 'MRPS35', 'IPPK', 'ARHGEF9', 'TRIM63', 'CBR3', 'EIF2S2', 'TSPY3', 'NF1', 'GPR34', 'HCAR3', 'DOCK5', 'FAM118B', 'SOX17', 'DZIP1L', 'TBPL2', 'OAS3', 'PFDN1', 'FBXO44', 'NUDT12', 'HEXIM2', 'KLHL6', 'ISCA1P1', 'TNR', 'CNNM2', 'PALB2', 'KMO', 'TLR7', 'SNAR-D', 'ZBTB45', 'GOSR1', 'CES1P1', 'RNF138P1', 'NR2C2AP', 'CHL1', 'C17ORF49', 'ASL', 'PSAT1', 'GALNT4', 'OC90', 'SNORD114-18', 'RBBP7', 'CD22', 'OR2AE1', 'METAP2', 'KRT73', 'ARMCX2', 'RPL11', 'UBE2QL1', 'SLC6A18', 'FGD3', 'TMED5', 'HNRNPH1', 'ROCK2', 'HGH1', 'ZNF843', 'LINC00282', 'NCAM2', 'B4GALT2', 'GULP1', 'CRLF2', 'FXYD4', 'CCR10', 'ZNF521', 'CD8A', 'TOPBP1', 'SIX5', 'CAV1', 'DEFB105A', 'MOGAT2', 'OR10S1', 'LYPD8', 'RAB42', 'SMCO4', 'INTS4', 'TMEM249', 'KMT2E-AS1', 'SOX18', 'LUC7L3', 'SUPT5H', 'STAT5A', 'GLIS3', 'OR13G1', 'PLA2G4C', 'SOX3', 'FOXQ1', 'KCTD20', 'EMCN', 'ERBB4', 'DRAM2', 'MYOM1', 'SMG1', 'DCUN1D4', 'UBTD1', 'ROR2', 'UCP3', 'RNF144A', 'FGF4', 'CIDEB', 'CKLF', 'INO80C', 'CSGALNACT1', 'ODF3B', 'TSN', 'CALML4', 'SSMEM1', 'MRPS23', 'PRKAB2', 'DOCK2', 'CAPN5', 'MTMR9LP', 'IFT27', 'CNTN1', 'NISCH', 'IGSF21', 'MROH2B', 'RBP7', 'C1ORF95', 'OOEP', 'PAX8', 'CLDND1', 'SLC39A8', 'SLC35F4', 'SNORD51', 'DCUN1D5', 'NUP35', 'USP11', 'LMLN', 'PDILT', 'HRASLS5', 'PARP12', 'NXPE1', 'RPLP1', 'GUSBP2', 'NUDCD3', 'SLC35A5', 'SPR', 'RNASEH2C', 'SH3GL2', 'DGCR9', 'DMTF1', 'PRR15', 'ARHGAP36', 'UGT3A1', 'SBSPON', 'TCF19', 'SNRPA', 'OR7G2', 'FDPS', 'RGCC', 'KLF14', 'BACH2', 'SLC4A10', 'KRTAP22-1', 'PCBP1', 'VTI1B', 'DCAF6', 'STK3', 'PTPRR', 'CDH20', 'ABLIM3', 'OR4D2', 'S100A7', 'ACTRT3', 'WHAMMP3', 'TRIM52', 'AGT', 'EME1', 'LINC01548', 'TPTE2P3', 'ZNF599', 'LYPLAL1', 'BNC1', 'MIEF1', 'SWAP70', 'WNK3', 'RRBP1', 'ATP10A', 'GOT1', 'PEX3', 'VAT1L', 'NDUFAF7', 'ATP13A3', 'ABCA8', 'SURF4', 'LLGL1', 'POLL', 'PDIA2', 'TTLL3', 'MXRA7', 'OR2A2', 'AQP7P3', 'OSER1', 'TOB2P1', 'MT3', 'PEX7', 'SLFN11', 'DZANK1', 'CBX3', 'CD6', 'TMEM108', 'EFNA5', 'RNF123', 'TOLLIP', 'EIF3A', 'KMT2E', 'PCDHB4', 'PRKAR2A', 'POLR3D', 'ADGRG1', 'KLRD1', 'KRT9', 'ZCCHC9', 'MCMBP', 'NPFF', 'HSF2', 'HMGA1', 'CRB1', 'SIPA1L2', 'OR52N2', 'CAV3', 'ARMC10', 'PAXIP1-AS1', 'SLC2A7', 'BEND7', 'RPL7A', 'SLC22A2', 'NPIPB5', 'MRPS28', 'CNTRL', 'ZBED9', 'BCL2L10', 'SPTBN1', 'DNAJB7', 'TMEM205', 'RPL36', 'PPOX', 'SYT2', 'ZNF321P', 'KGFLP2', 'AMPD2', 'CMTR2', 'RHOU', 'TSPAN10', 'SNORA49', 'FSHB', 'HILS1', 'ASAP1-IT1', 'RUFY3', 'ATP6V0A4', 'CLPSL2', 'SOAT1', 'PLIN1', 'YWHAB', 'GUCY1A3', 'IFIT2', 'UCKL1', 'GAGE12F', 'CHN2', 'GAL3ST1', 'EDF1', 'TAC1', 'CPNE2', 'HINT2', 'SNORA71D', 'CIC', 'RAD1', 'FKRP', 'STEAP2', 'VAPA', 'ATP6V1F', 'PRR18', 'DAB2', 'MROH8', 'TSC22D3', 'CATSPER3', 'CNBD1', 'DNASE1L1', 'C6ORF201', 'QRICH1', 'PCDHGA5', 'IFT122', 'PPP2R4', 'TAF7', 'AP3D1', 'LAIR2', 'THEMIS', 'DCST1', 'DNMT3A', 'CNTNAP3', 'PRL', 'LDLRAD1', 'ARHGAP19', 'JAKMIP1', 'PRSS50', 'HAGH', 'ARPC1B', 'RPP25L', 'HEPACAM', 'RUNDC3A', 'EDN2', 'METRN', 'GSAP', 'CEP135', 'CPT1A', 'BCO2', 'CD48', 'CDK19', 'LRRC47', 'CDC14B', 'CAMKK1', 'RPSAP58', 'ZNF346', 'HECTD4', 'TMEM161A', 'RABAC1', 'LOX', 'ASB9', 'LGALS1', 'PPP1R9A', 'FAM127C', 'ZNF354B', 'TGFBR2', 'MAPK8IP1', 'DBX2', 'TIMELESS', 'BCL2A1', 'COPB1', 'LOC284661', 'SPRR2A', 'KRTAP27-1', 'BRWD3', 'ZNF436-AS1', 'MBOAT1', 'RBSN', 'APCS', 'OR10A5', 'ANKDD1A', 'CDKN2D', 'PRR27', 'OGG1', 'PRAMEF1', 'CLCA3P', 'KIDINS220', 'PRKD1', 'TTC30B', 'LOC400940', 'CCNG2', 'BPIFB6', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.9568117085505569 Spearman Correlation: 0.8724265041537834 Coefficient of Determination: 0.9154886426676558 RMSE: 0.15187273400162796 NRMSE: 0.03665147911326302 MAPE: 28.034967392407196 Pearson Correlation: 0.050496769175236086 Spearman Correlation: 0.27382635693711893 Coefficient of Determination: -7.586360453018619 RMSE: 1.0692146281224066 NRMSE: 0.4657466690431705 MAPE: 176.12921109307646 Predictor: ElasticNet Pearson Correlation: 0.6943377656091068 Spearman Correlation: 0.6014626953239652 Coefficient of Determination: 0.2619830426966042 RMSE: 0.4488026814361564 NRMSE: 0.10830964631516675 MAPE: 86.78156397947917 Pearson Correlation: 0.5442398807218517 Spearman Correlation: 0.489195625880622 Coefficient of Determination: 0.21502389553812573 RMSE: 0.32328723141822696 NRMSE: 0.14082294351101057 MAPE: 106.59777837602407 Predictor: RandomForests Pearson Correlation: 0.863618775223123 Spearman Correlation: 0.7273080964359747 Coefficient of Determination: 0.7418047087270185 RMSE: 0.2654583750095184 NRMSE: 0.06406312595253479 MAPE: 55.51003435096603 Pearson Correlation: 0.7782683873527656 Spearman Correlation: 0.6680766738663713 Coefficient of Determination: 0.5536864779934367 RMSE: 0.2437700554951242 NRMSE: 0.10618550137000662 MAPE: 77.632130528253 Protein: CCND1 x_train_column_count: 859 x_train columns: ['ZNF385D', 'CASS4', 'ARL5C', 'MBD1', 'CCK', 'ZDHHC16', 'GMIP', 'LINC00961', 'BLMH', 'AKAP12', 'WRAP53', 'RIBC1', 'MROH5', 'TMEM232', 'MEF2B', 'EFTUD2', 'TFAP2C', 'SHANK1', 'MAP2', 'C3ORF52', 'PAXBP1', 'AGAP2-AS1', 'MYPOP', 'TBRG4', 'FLOT2', 'LCE6A', 'EIF6', 'DNAJB4', 'KRT17P5', 'ZNF77', 'SCLT1', 'SLC35F5', 'NEIL2', 'FAM58BP', 'RANBP1', 'GRIK1-AS1', 'IGSF9', 'ZBTB8B', 'RPL23', 'MAPRE2', 'MICALCL', 'DIO3OS', 'RFX4', 'SLIT3', 'AFMID', 'ZFAND3', 'DIDO1', 'RAB11A', 'PIWIL3', 'TECTA', 'SLBP', 'MTUS1', 'POPDC2', 'LINC00889', 'FBN3', 'ENTPD8', 'SHISA9', 'DCTN6', 'ARHGAP42', 'UBXN10', 'RAB41', 'GINS2', 'ZMPSTE24', 'TNFRSF13B', 'NDRG4', 'SCARNA14', 'C21ORF62', 'RAB40AL', 'OR52K1', 'GUCY2EP', 'DRP2', 'NOXO1', 'MYH10', 'MORN1', 'MAPK15', 'LRRC2', 'AKAP2', 'CACNA2D4', 'NAGA', 'SMG1P3', 'CMTM6', 'HLA-J', 'XK', 'GUCY2C', 'NBN', 'PSMD11', 'ZMYM5', 'SLC35E2', 'SAYSD1', 'PLGLA', 'CLEC4D', 'PGA4', 'KREMEN1', 'COMP', 'HINFP', 'LY75', 'CPA1', 'ZNF546', 'FAM83D', 'AOX2P', 'LINC01558', 'SPATA31D4', 'EGFLAM', 'SNORD113-7', 'ZCCHC17', 'TPPP', 'SLC25A37', 'DDHD1', 'CDK5RAP2', 'MTRF1L', 'AGO3', 'JAK1', 'COX7B2', 'CLCN1', 'DEPDC4', 'LRRC25', 'TTLL6', 'NUMA1', 'MS4A10', 'AKAP8', 'CDK16', 'SEMG2', 'CCDC142', 'JADE1', 'SGCZ', 'ZRANB3', 'GPATCH1', 'CDS2', 'ST20', 'PLSCR2', 'STYX', 'ASIC5', 'C16ORF74', 'OR2V2', 'FAM169A', 'KRTAP10-2', 'XPA', 'MGST2', 'SLC22A24', 'SSPO', 'ZNF705D', 'ZEB1', 'ZNF429', 'CLCA2', 'OR2S2', 'SNX4', 'ZNF469', 'CSTA', 'NLRP14', 'NRBP1', 'TM4SF4', 'RIPPLY1', 'AP1G1', 'DCP2', 'SPINK5', 'PNLIPRP3', 'CLEC3A', 'UQCRBP1', 'STRADB', 'KLHL4', 'PRPF40B', 'DEFB106A', 'FBXO11', 'ERCC3', 'KCTD3', 'OR2L2', 'SYT17', 'DDTL', 'CR2', 'XKRY', 'FLRT3', 'CIDEA', 'NRSN1', 'TNK2', 'JCHAIN', 'SEPHS2', 'ZNF625', 'TMIGD1', 'GRASP', 'CLMP', 'DCUN1D2', 'SYNJ2BP', 'BTBD11', 'SH3D19', 'OR6C2', 'GTPBP10', 'POLM', 'RNF208', 'TOMM7', 'GJD3', 'DIRC2', 'HIVEP1', 'C1ORF109', 'BARHL2', 'ZNF296', 'FBXO34', 'B4GALT3', 'APMAP', 'NXF3', 'ZNF117', 'KIAA0355', 'MEPCE', 'IFNA10', 'SRP9', 'ASTN1', 'LRRC45', 'DUSP23', 'FAM105A', 'RNF2', 'EEF1DP3', 'UQCRB', 'RBL2', 'EIF3A', 'PRKCQ', 'FXR2', 'LBX1', 'SNORD70', 'COX4I2', 'KIAA0040', 'KIF3B', 'RPS16', 'SLC5A6', 'FAM9C', 'IRAK1BP1', 'OR4C46', 'DKKL1', 'IL20RA', 'IFIT1', 'FSCB', 'INPP5A', 'C1ORF159', 'SLC35F3', 'TPT1', 'CLN6', 'GREM1', 'AQP7', 'DENND4B', 'EIF2S3', 'HEYL', 'DDX18', 'HNRNPA3', 'CXCL8', 'GNA14', 'PREX1', 'KATNBL1', 'VWA3A', 'KRBA2', 'RAB11B', 'LINC00552', 'TUG1', 'EPHA1', 'MED27', 'VARS', 'BAHCC1', 'H1FX-AS1', 'ZIC2', 'PDE6H', 'CABP5', 'SUCNR1', 'NUP98', 'GCSAM', 'ZNF833P', 'IGFL1', 'KBTBD8', 'KDM4B', 'ITPA', 'TBC1D3', 'FGG', 'SNORD26', 'OR10H2', 'WDR83', 'RFC1', 'RAD50', 'ALMS1', 'XKRY2', 'UBE4B', 'CNST', 'TTC19', 'NUBPL', 'LOC284009', 'STH', 'ANP32E', 'SFXN5', 'PRKAR2B', 'FSTL1', 'TSTD2', 'MSRB3', 'CCDC174', 'SLC16A13', 'ANXA8L1', 'NOX3', 'ARHGEF7', 'FBXO10', 'UG0898H09', 'LOH12CR1', 'HIF3A', 'CYP4F11', 'FAM214B', 'CAMKV', 'C1ORF158', 'USP15', 'NIP7', 'HIST3H2BB', 'CES4A', 'SORBS1', 'ASB12', 'TMEM104', 'NET1', 'SRGAP1', 'ATP2A2', 'SV2C', 'WBSCR22', 'IFNL3', 'KCMF1', 'FAM151B', 'IFNA14', 'MCTS2P', 'TAB3', 'EPCAM', 'COQ10B', 'MSMO1', 'RBMS3', 'ANKRD13A', 'FSHB', 'CREBBP', 'XIRP2', 'SOD1', 'RHBDD2', 'NHSL1', 'C22ORF46', 'MYOF', 'PTRHD1', 'KLF9', 'DNAJC13', 'RGN', 'COL4A6', 'FAM86JP', 'SPRTN', 'C17ORF85', 'PRDM10', 'FTH1', 'FAM225A', 'DDHD2', 'CX3CR1', 'JMJD6', 'SERF1A', 'MELK', 'NEDD8', 'PCNP', 'FLJ37201', 'KCTD5', 'PTPRU', 'WDR72', 'RPLP0', 'C16ORF90', 'SLC35F1', 'APOL5', 'SNORD116-15', 'RAD23A', 'XKRX', 'MYOM2', 'OR9K2', 'MYOM1', 'GLIS3', 'KCTD1', 'RASSF3', 'ARHGAP1', 'RNF39', 'FUT9', 'PTP4A1', 'CDK1', 'IGF2R', 'SNORD78', 'ZDHHC14', 'PICK1', 'FAM71E2', 'SLC44A3', 'CNTF', 'RAD51AP2', 'PADI6', 'SNORD114-19', 'KRT25', 'PKD1', 'NDUFB8', 'DCTN2', 'CCDC144CP', 'MED26', 'TOMM22', 'TCL1A', 'POLR1D', 'GGCX', 'CDH24', 'DNAJC21', 'ADGRF4', 'ZAR1L', 'EHF', 'DUSP15', 'HP', 'TMEM52B', 'RTEL1', 'TICRR', 'MAPK8', 'ECM2', 'SH3BP5L', 'HEBP2', 'NFATC3', 'CDC27', 'LOC647859', 'PCDH11Y', 'LRRC73', 'SEMA7A', 'LINC01096', 'RSU1', 'C1ORF54', 'FAM217A', 'ARFGAP1', 'SCIMP', 'MAZ', 'HNRNPH1', 'CHAC1', 'PCK1', 'TECRL', 'SLC22A16', 'ZP4', 'TTC39A', 'MDH1B', 'SND1-IT1', 'KCNV1', 'ZDHHC15', 'NDUFB5', 'KLHL38', 'DHX33', 'GPT2', 'RNASEK', 'NDUFAF2', 'SPRR2C', 'PLD2', 'FLCN', 'PIP5K1C', 'GPR180', 'SLC45A3', 'CIAPIN1', 'GTF3C5', 'SNRNP200', 'CYP11A1', 'CCDC102A', 'RNASE2', 'KHDC3L', 'SMIM3', 'FAM83F', 'KRT81', 'NFAM1', 'USP28', 'SIAH3', 'EXOC3L1', 'PCDH20', 'SRPK1', 'PEX2', 'ZIC4', 'SLC30A5', 'RAD18', 'ARPC5L', 'ERCC8', 'GHRLOS', 'ETV1', 'WDR43', 'CETN1', 'PAFAH1B3', 'KIF17', 'MTOR', 'CXCR4', 'PCDH11X', 'MRPS23', 'PM20D2', 'SLC4A1AP', 'CIZ1', 'SYAP1', 'KCP', 'GPR39', 'FAM181A-AS1', 'CD1B', 'ARG2', 'CTPS2', 'SPEF2', 'DHDH', 'TMEM74', 'TACC1', 'ITCH', 'CRYM-AS1', 'OR5K2', 'ATP5D', 'PLEKHG3', 'PI4KB', 'FBXO6', 'CUTC', 'MRFAP1', 'RAB4A', 'CKMT1B', 'SNORA30', 'ATP6V1F', 'IFIT3', 'HNRNPU', 'LSM7', 'TTYH3', 'UBE2V2', 'CHKA', 'DAPK3', 'DLG2', 'NAA35', 'MYH9', 'CEACAM7', 'MBD5', 'NAV2', 'DUS3L', 'MBL1P', 'C1QTNF1', 'LOC389033', 'SPAG1', 'CDH3', 'MPV17L2', 'EXOSC4', 'RIPPLY3', 'RASAL3', 'MCM3AP', 'WDR93', 'ARHGAP27', 'LINC00852', 'OPRL1', 'CCT4', 'WDR7', 'ZNF17', 'FAM74A3', 'ZFP30', 'POLI', 'FGL2', 'SLC7A1', 'LSG1', 'GPHA2', 'EGFL7', 'HPS5', 'HDAC9', 'MAT2A', 'SH2B1', 'ZNF394', 'FREM2', 'PLA2G6', 'PCDHB10', 'TTTY6B', 'THBS3', 'HSPB2', 'RELL1', 'FAM175A', 'SLTM', 'CCDC173', 'C10ORF88', 'PSKH2', 'DERL1', 'SASH1', 'DYDC1', 'CT47A9', 'PTBP1', 'IRS1', 'ARHGAP12', 'PRKCG', 'SPATA31D5P', 'CCDC117', 'BBS9', 'THOC5', 'SAMD4B', 'ZNF284', 'SNORD58A', 'INTU', 'KIF20B', 'TOP3A', 'SLC12A3', 'RBM24', 'ADH7', 'PNPLA4', 'CYP24A1', 'BTG3', 'KIF6', 'KATNAL2', 'PKIG', 'NTHL1', 'TRIM62', 'C8ORF59', 'SUCO', 'C10ORF82', 'C3ORF62', 'UMODL1', 'TAF1A', 'ZNF222', 'DTNBP1', 'GRAMD2', 'EFCAB7', 'MS4A7', 'MTDH', 'PDZD4', 'DNAJB3', 'JOSD2', 'ARHGEF6', 'OR4C15', 'NOX5', 'MC2R', 'ZC4H2', 'RASA4', 'SCAMP3', 'WDR49', 'PARP14', 'SPATC1L', 'ZNF738', 'SOX1', 'CBWD6', 'ARL4A', 'CTXN2', 'DNAAF2', 'AGRP', 'FAXC', 'IL1RAPL1', 'HEPACAM', 'SGOL2', 'MYEOV2', 'VPS18', 'CHRNA3', 'DDB2', 'C2ORF76', 'PAFAH2', 'CRYBB1', 'DSN1', 'CDK5R1', 'SASH3', 'SLX4', 'HECA', 'SNORD114-9', 'LGALS1', 'TTC41P', 'RPL12', 'TSTD1', 'SDHAF3', 'BMP7', 'SCARNA6', 'ZNF829', 'IL26', 'LRRC3B', 'TMEM95', 'KIF18B', 'ZNF579', 'MASP2', 'GALNT2', 'LOC644936', 'VSX2', 'SIAE', 'GBP4', 'SRSF8', 'OR11H1', 'VILL', 'CLUH', 'ZNF271P', 'N4BP2L2', 'ZFAND1', 'N6AMT2', 'MSH3', 'LOC100272217', 'KLHDC8B', 'PRODH', 'LOC100128573', 'C11ORF54', 'PDE3A', 'CRB3', 'MXRA7', 'SGCB', 'WDR83OS', 'SKIV2L', 'SLC25A14', 'DYM', 'RRP7A', 'RELN', 'WTIP', 'FKBP6', 'PHACTR2', 'PADI3', 'ZBTB8OS', 'SEPW1', 'MYEOV', 'C16ORF72', 'SLC22A1', 'ACOT12', 'LPGAT1', 'TPM4', 'ARL13A', 'ADRBK2', 'ECT2L', 'NOM1', 'SNORD54', 'MTERF3', 'NDUFA11', 'LOC285740', 'ZBED8', 'RDM1', 'C11ORF65', 'HIST1H1E', 'ZSCAN21', 'KLHDC1', 'SLC25A24', 'C1ORF189', 'ARL9', 'TINF2', 'CDS1', 'TCHP', 'MDN1', 'TMEM59L', 'HCAR3', 'CCDC70', 'TMSB15A', 'SNORD114-14', 'WDR88', 'USP31', 'ANO1', 'PIGG', 'EBNA1BP2', 'DDC', 'ABCB6', 'PKNOX1', 'OR4F5', 'SNORD115-33', 'ZNF423', 'AP3M2', 'PAM', 'CAPN3', 'SCFD2', 'TAOK1', 'NICN1', 'LINC00909', 'COL1A1', 'BTBD7', 'C4ORF50', 'COG2', 'RPS6KL1', 'ANKRD30BL', 'SAA2', 'NFKBIB', 'PSAPL1', 'ZNF879', 'PEX12', 'SNRNP25', 'MED25', 'BCO2', 'GLRA2', 'STOX2', 'GLT1D1', 'C15ORF26', 'LTBP4', 'FCER1G', 'CDK11B', 'PRELP', 'WFIKKN1', 'RTN4', 'SPATA6L', 'TMEM35', 'FAM210A', 'FBXO7', 'WBP1L', 'POMK', 'PRR14L', 'CDSN', 'SPSB1', 'DNAJA3', 'RRP15', 'ADGRB3', 'TSACC', 'OR5AP2', 'HRC', 'SEC13', 'ICE2', 'IFNGR2', 'C10ORF11', 'COQ10A', 'KHNYN', 'DYNLRB2', 'NR5A2', 'SLC34A1', 'BRCC3', 'UBE2A', 'TMEM256', 'MICU2', 'SLC10A2', 'INAFM1', 'CXORF40A', 'SRXN1', 'IER2', 'E2F4', 'ZNF322P1', 'FOXE3', 'SRSF11', 'SEPT3', 'SCGB1D2', 'PAPL', 'LGALS9C', 'TPCN1', 'KLRB1', 'SS18L1', 'SPANXN4', 'CNKSR1', 'METTL12', 'PTK2B', 'SLC27A1', 'ZNF594', 'CDH15', 'PSMB4', 'CCSER1', 'C5AR2', 'LRFN1', 'TBC1D22B', 'PRICKLE2', 'ADAMTS14', 'ALPP', 'EYA1', 'MRPS31', 'ZBTB3', 'ZNF473', 'TOB2P1', 'TIGD6', 'FAM227A', 'LCE1F', 'WDR66', 'PLIN4', 'GPM6B', 'BCKDHB', 'APOPT1', 'KRTAP5-8', 'SLC35A4', 'C9ORF129', 'PRKAB2', 'NFIX', 'SLC36A3', 'HIP1', 'TBC1D2B', 'BEND3P3', 'MAP2K6', 'MTCH2', 'POC5', 'RUSC1', 'FGD3', 'BEGAIN', 'SBF2', 'PLEKHA8P1', 'SLC5A11', 'HOXA11-AS', 'PRAMEF6', 'TMEM249', 'RASSF5', 'EPPIN', 'SERINC4', 'KLHDC3', 'ZNF260', 'STC1', 'BLCAP', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 9.749177390992002e-16 NRMSE: 5.860923513599694e-16 MAPE: 3.706081122693271e-12 Pearson Correlation: 0.1534970905886185 Spearman Correlation: 0.13715632364493324 Coefficient of Determination: -1.9952719134039243 RMSE: 0.3629932448346244 NRMSE: 0.3439618364252171 MAPE: 514.685506804378 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: RandomForests Pearson Correlation: 0.587572363350653 Spearman Correlation: 0.5508847524861735 Coefficient of Determination: 0.2906170446876153 RMSE: 0.20606151562243882 NRMSE: 0.12387822415411552 MAPE: 487.4772521286992 Pearson Correlation: 0.3605455159385547 Spearman Correlation: 0.3380865098068555 Coefficient of Determination: 0.12261916395314598 RMSE: 0.196460157594834 NRMSE: 0.186159928737773 MAPE: 336.8711500572955 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['PSD', 'NFYC', 'TMIGD1', 'KHNYN', 'C1ORF131', 'FAM205BP', 'CLEC18B', 'CEL', 'KDM4A', 'HTR1B', 'HNRNPAB', 'KLHDC1', 'SGCA', 'CCDC54', 'NCOA5', 'RBSN', 'SNHG5', 'NUDC', 'RAD9A', 'TBC1D3P1-DHX40P1', 'SH2B3', 'ITGB2', 'AHNAK2', 'PARP15', 'IL15RA', 'IKZF1', 'ANKRD55', 'OPN4', 'FETUB', 'THRB', 'LGALS9C', 'SUN2', 'SOX10', 'HSP90AB2P', 'MGC16275', 'DEFB104A', 'VCPKMT', 'SNORD62A', 'FKBP6', 'STC2', 'CTNND2', 'OR6M1', 'VNN3', 'CYP2A7', 'CXORF38', 'SPTLC2', 'ACVR1', 'TTTY23', 'TMPRSS3', 'RFPL1S', 'RND2', 'SPAG6', 'TMEM59L', 'IGSF8', 'HPS3', 'ABO', 'ZFHX4-AS1', 'LOXL2', 'ANGPTL3', 'HLA-DRB1', 'PAICS', 'MICAL1', 'GGTA1P', 'PRIM2', 'PSRC1', 'GNPDA1', 'OR6V1', 'ADD1', 'MCU', 'ABCF3', 'SCN1B', 'ARMC12', 'EML2', 'CAV3', 'PDXK', 'RRP1B', 'PPIG', 'CLDN11', 'ODF3', 'GTF2IRD1', 'SNORA44', 'HCRTR2', 'KLRF1', 'EMC6', 'CPNE1', 'CMPK1', 'DLL1', 'FAM201A', 'CGB', 'OR6S1', 'PSKH1', 'MYT1', 'HIST2H3C', 'PGK1', 'NQO1', 'HDAC10', 'TRA2B', 'PSMA6', 'ABHD15', 'ZXDB', 'PRAP1', 'CNNM2', 'TRIM8', 'TSPAN32', 'CCDC71', 'CHSY1', 'PLEKHG3', 'NR1I3', 'RNF10', 'PTGS1', 'TFEB', 'DTWD2', 'GRB2', 'EVA1B', 'ARL17A', 'NHLRC1', 'RPS3', 'TMTC2', 'LINC00301', 'ETFA', 'TBC1D3P2', 'HPGDS', 'ZNF44', 'RIIAD1', 'SLC1A3', 'SLC35F1', 'GSTM2', 'ZRANB2', 'TMOD3', 'SULT6B1', 'DHODH', 'ZNF805', 'EME1', 'XKR8', 'USP5', 'CLIP2', 'THAP8', 'RSPH3', 'SNORA16B', 'SNORD91A', 'RC3H2', 'CFHR4', 'GPBAR1', 'IQSEC3', 'USP3', 'DOK5', 'LRBA', 'PARK2', 'IARS', 'TNFRSF10A', 'RAB10', 'MPZ', 'C14ORF132', 'LRCH3', 'ASB16', 'HYAL1', 'PARVA', 'APITD1', 'CHGA', 'ANAPC16', 'CUL5', 'TSHR', 'FAM167A', 'OR8D4', 'ADSL', 'TTTY10', 'RNF214', 'STAM', 'TARP', 'MANEAL', 'CBL', 'MAN1A2', 'KIAA1522', 'LOC153910', 'TRIM69', 'OR5B12', 'SLAMF9', 'HNRNPH2', 'DSCAM', 'AKR1D1', 'FBXO43', 'TMEM102', 'CACNA1E', 'TRDN', 'ZNF793', 'PUS7L', 'LNX2', 'CACTIN', 'SNORD114-3', 'DOC2B', 'METAP2', 'MROH1', 'IL36G', 'LINC00265', 'RASSF4', 'KCTD17', 'PADI1', 'INPP5A', 'DSCC1', 'AK2', 'ENTPD8', 'PMPCA', 'POU2AF1', 'KRT28', 'MCM3', 'SH3PXD2A', 'PHACTR3', 'ARMC8', 'DMP1', 'SCFD1', 'CYMP', 'SPAG7', 'DLG5-AS1', 'DYNLL2', 'CCAR1', 'ZDHHC12', 'SLC22A9', 'ZNF32', 'GMDS', 'ARHGAP33', 'URAHP', 'MATK', 'FAM173A', 'ZNF511', 'ZNF320', 'ANKRD18DP', 'PLRG1', 'MASP1', 'MSGN1', 'LOC729603', 'VAMP1', 'ZNF331', 'RNF112', 'C9ORF91', 'SLCO2A1', 'OSGIN1', 'IFT22', 'ZBED4', 'C1ORF226', 'MKRN1', 'PGBD4', 'TRIM67', 'PLCG2', 'PRKRIR', 'LINC00635', 'CYP26C1', 'FAM120AOS', 'WDR34', 'ALOX15', 'HOMER3', 'ELOVL1', 'KDM5B', 'TMTC4', 'ERBB3', 'C3ORF67', 'SP9', 'WIPF3', 'TMEM248', 'IFNB1', 'FAM81A', 'ADAD1', 'MAX', 'GRIA1', 'TTC21A', 'ATP1A1-AS1', 'VWA5B1', 'CDH1', 'HS3ST2', 'BIRC7', 'NME3', 'LOC728554', 'RSRC2', 'TRIP12', 'HMGB4', 'ZNF74', 'ATG16L1', 'C1ORF228', 'TBC1D14', 'CCDC186', 'MUL1', 'ZSWIM1', 'NEIL3', 'CDCA7L', 'MEAF6', 'KIF1C', 'PHF2P1', 'C12ORF50', 'KAT2B', 'VILL', 'ZFYVE9', 'SBK1', 'PAPD7', 'SCARNA4', 'FAU', 'CSRP2BP', 'MAPT-IT1', 'SYBU', 'PRDM8', 'TSNAXIP1', 'VASH1', 'XCL2', 'IL10RB', 'CYP3A43', 'OR1J1', 'GALNT4', 'DFNA5', 'CLCN7', 'TAAR5', 'NHLRC4', 'DPM2', 'ZIM2', 'RBM19', 'FUS', 'NRGN', 'PLAC9', 'TMEM263', 'UBE2MP1', 'ALDH3B2', 'PABPC5', 'MMD', 'KCNK13', 'WIPI1', 'MCM3AP', 'MRPL30', 'EIF3G', 'CHRNA10', 'MTSS1', 'HCG27', 'SNORD69', 'PSMA5', 'ACAP2', 'RHOV', 'THEM4', 'HEG1', 'XKR4', 'CLEC17A', 'POLE4', 'ADGRF3', 'EFTUD2', 'CTSF', 'NCAPD3', 'ADAM11', 'MC4R', 'TIGD4', 'HLA-DQB1', 'FOXQ1', 'RAB11FIP5', 'RPL18', 'RNF215', 'LOC606724', 'CNKSR3', 'MFSD8', 'FAM103A1', 'ARGFXP2', 'SGCB', 'FAM3B', 'UGT2A1', 'UCMA', 'CEACAM1', 'SLC38A8', 'HIST1H3D', 'IMMP2L', 'B4GALNT4', 'LSMEM2', 'USP27X', 'CYP2E1', 'HSD17B10', 'SSR2', 'DSC2', 'C11ORF58', 'DPY19L2P2', 'SPAG16', 'TXNDC9', 'SLC10A1', 'PARN', 'DNAJB6', 'S100A14', 'ANXA4', 'SNORD18A', 'SNCAIP', 'CRLF1', 'NIM1K', 'EBF4', 'MEX3A', 'MFGE8', 'MLXIP', 'DLG4', 'RSPO4', 'STAP2', 'GLI2', 'IL11', 'PAPSS2', 'SLC13A5', 'NKAP', 'TET1', 'ARNT2', 'KATNAL1', 'RNF141', 'PCSK7', 'CCDC18', 'TPCN1', 'MYOF', 'EVX2', 'XPA', 'KANK2', 'DBP', 'CRIPAK', 'ABHD16A', 'CNTNAP1', 'TOMM70A', 'MSH5', 'NLRC4', 'NMNAT1', 'LINC01312', 'SERP2', 'RPS5', 'RASSF6', 'CCL3L1', 'UBXN4', 'NTF4', 'SSX3', 'SETX', 'ATP11A', 'APMAP', 'GPR17', 'BRD8', 'TIAL1', 'OR8B3', 'GPR18', 'SSX4', 'ZSCAN32', 'TMC1', 'CST1', 'PRSS21', 'DNAJC3', 'LOC100240735', 'SMR3A', 'SHANK3', 'SMN2', 'CCDC170', 'OLIG3', 'RNF121', 'BAZ1B', 'NTRK2', 'INSRR', 'TLN2', 'VPS13A', 'SNORD88A', 'CCR10', 'PPP1R1A', 'CA14', 'NAA60', 'PPFIBP1', 'SERPINB6', 'EMX1', 'MAFG-AS1', 'MAGEA6', 'RAP1GAP', 'ARL8A', 'GUCA2A', 'MICALL2', 'PRLH', 'C14ORF166', 'POM121L2', 'DNAJC5G', 'RENBP', 'RNF207', 'C7', 'ZNF596', 'AFMID', 'RASSF2', 'KRTAP5-4', 'MLLT6', 'LRP1', 'TMEM138', 'CTAGE6', 'CNTN6', 'DCUN1D5', 'FBP2', 'DUSP11', 'PLET1', 'SOX14', 'PHLDB1', 'TRIM16', 'SNORA45B', 'DEFB116', 'PLCD1', 'ESRG', 'RTN4', 'SPAST', 'FAM155B', 'SGK2', 'PCDHGA7', 'MBLAC1', 'CLK3', 'ZFYVE27', 'RPS12', 'CGA', 'SDC2', 'MAP3K14', 'OR5AP2', 'HOMER1', 'MAST1', 'TFF1', 'DDOST', 'LINC00667', 'ZSWIM6', 'THAP7-AS1', 'ENPP5', 'PTGDS', 'CLASP2', 'NOX5', 'IL24', 'FAM196B', 'NTM', 'ACBD7', 'MYLK', 'ITFG3', 'HINT3', 'P2RY1', 'SLC27A1', 'CRELD1', 'DNAH5', 'MGAM2', 'ALDH3A1', 'SIX3', 'SDHAF1', 'NYAP1', 'HAL', 'SDHAF4', 'ESRRA', 'KCTD14', 'SPATA31E1', 'TOPAZ1', 'H2AFJ', 'SIX6', 'GZMH', 'C14ORF93', 'LILRB4', 'DALRD3', 'PHF10', 'TADA3', 'PDE1B', 'TCF4', 'SNORA81', 'C7ORF50', 'NECAB1', 'HRCT1', 'SLC26A10', 'EIF2AK1', 'SNORA5B', 'GRK7', 'KIAA1324', 'TXLNB', 'ZPLD1', 'ZP4', 'ZFAND6', 'FRG2B', 'TNK1', 'CLTC', 'VDR', 'ALDH1A3', 'SP6', 'RASAL2-AS1', 'SOX21', 'ZNF213', 'CLIC1', 'WAS', 'TTC39B', 'PDE5A', 'IGFBP3', 'OR52M1', 'SNORD50A', 'RPP40', 'MAP3K9', 'ZNF212', 'CDH12', 'PINX1', 'RPL34-AS1', 'FSD1L', 'PID1', 'KLHL5', 'UBTFL1', 'C1ORF123', 'RSBN1L', 'ATPAF1', 'ALKBH5', 'CYB561D2', 'OLFM1', 'CASQ1', 'FCGR1C', 'HIST2H3D', 'MXRA8', 'ZNF252P-AS1', 'HIGD1A', 'ZDHHC13', 'FAM169B', 'HBA1', 'HIPK4', 'NETO1', 'CBFA2T2', 'RSRP1', 'C20ORF27', 'CCL28', 'CYB5A', 'TINF2', 'SLC27A4', 'SNORA37', 'CDRT1', 'CAMK1G', 'TNC', 'ZNF648', 'SMAD2', 'DMRT1', 'ASMTL-AS1', 'CTU2', 'OR14A16', 'SNORA57', 'LGALS9', 'LUZP2', 'LOC652276', 'NPIPB5', 'LRRC47', 'ZNF639', 'MLLT4-AS1', 'MRPL11', 'MRPL53', 'MYEOV2', 'SMCO2', 'ALS2CR12', 'LOC388242', 'FOXL1', 'CCNG2', 'C19ORF54', 'COG7', 'MYO19', 'NOP58', 'ZNF311', 'EIF1', 'PGBD2', 'LINC00473', 'DPH6', 'ZNF502', 'HCP5', 'BPIFC', 'ZNF536', 'RUNDC3A', 'KIRREL3', 'ATP6V1E1', 'GAPDH', 'EMG1', 'CHIC1', 'SPG7', 'C12ORF71', 'UBE2U', 'FKBP4', 'PRR5-ARHGAP8', 'KIAA1107', 'SMPDL3A', 'OR52L1', 'ADAM12', 'SSH2', 'LINC00244', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.887302024354192e-15 NRMSE: 6.62265878043885e-16 MAPE: 5.626444998876113e-12 Pearson Correlation: 0.5512638117064137 Spearman Correlation: 0.46745030168779306 Coefficient of Determination: -0.5403528144434322 RMSE: 1.323694353768854 NRMSE: 0.2387788357328909 MAPE: 619.7181960074855 Predictor: ElasticNet Pearson Correlation: 0.7306598506253799 Spearman Correlation: 0.5965248930120418 Coefficient of Determination: 0.2503062557477561 RMSE: 0.8496009364938016 NRMSE: 0.14474350247777598 MAPE: 815.2008792975483 Pearson Correlation: 0.7417440427480896 Spearman Correlation: 0.5719305377010864 Coefficient of Determination: 0.23098383328935634 RMSE: 0.9352879695082156 NRMSE: 0.16871490899563743 MAPE: 226.9087624763236 Predictor: RandomForests Pearson Correlation: 0.8384464678835429 Spearman Correlation: 0.6560190131451531 Coefficient of Determination: 0.6955023140270674 RMSE: 0.5414583272745895 NRMSE: 0.09224633750866135 MAPE: 527.5987503918269 Pearson Correlation: 0.8579351485590446 Spearman Correlation: 0.7071263180709705 Coefficient of Determination: 0.7311647768556416 RMSE: 0.5529943551389238 NRMSE: 0.09975365378795797 MAPE: 192.01085585913327 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['ST3GAL2', 'CXCL16', 'OR51I1', 'EIF1AY', 'IARS2', 'SCARNA22', 'LIPH', 'PWRN1', 'MT2A', 'SLC1A1', 'OPN1SW', 'XXYLT1', 'SMAP1', 'MDC1', 'MARK2', 'SPATA31A5', 'PSMD10', 'TTC36', 'PRR14', 'SNAI2', 'CDC73', 'ZNF71', 'KIFAP3', 'CLVS1', 'HSBP1L1', 'LINC00663', 'P3H1', 'ATP5H', 'BPIFB1', 'DEFB109P1', 'MAP1LC3B', 'DOCK6', 'AGFG1', 'DOCK2', 'PPP1R14D', 'SUPV3L1', 'ATP6V1C1', 'UNC5CL', 'COL5A1', 'TMIE', 'DTX2P1-UPK3BP1-PMS2P11', 'KCNQ2', 'SUSD5', 'MFI2', 'PHYHIP', 'PILRA', 'OPN4', 'SAAL1', 'ICAM3', 'ERCC8', 'TRMT10A', 'IGF2-AS', 'ASB14', 'SNORD115-41', 'LPL', 'FAM210B', 'BOC', 'PCP4', 'STEAP2', 'FER1L4', 'RPS27A', 'NKIRAS1', 'APLNR', 'WDR86', 'TMEM169', 'DDX46', 'GAGE12J', 'TAGLN3', 'SUPT7L', 'PRNP', 'UCKL1-AS1', 'HKDC1', 'CNNM2', 'NLRP11', 'AICDA', 'MAP10', 'LINC01098', 'YWHAH', 'ELMOD1', 'YWHAG', 'PRKCDBP', 'FGF8', 'GAD2', 'ZG16', 'SLC26A8', 'KEL', 'ZMAT4', 'HSD17B7P2', 'HYAL3', 'SRR', 'TAF4B', 'METTL24', 'MCM4', 'MED30', 'WHAMM', 'FAM155B', 'RAB41', 'NEFL', 'FOXD3', 'CYP4Z1', 'CHN2', 'KIAA1614', 'BBS7', 'NME2', 'RYBP', 'TMEM126B', 'GXYLT2', 'BATF', 'SNPH', 'SCN4B', 'PLCD3', 'SLC12A9', 'AXIN2', 'ZNF526', 'CYP2B7P', 'GYS1', 'RBP2', 'PTDSS2', 'PYCARD', 'LOC284661', 'HDX', 'ANXA4', 'AGPAT5', 'CSF2RB', 'SLC1A4', 'CAPN11', 'NBPF1', 'RNF31', 'ADAM12', 'SOX11', 'IPO8', 'SALL1', 'ACSBG1', 'LCE4A', 'COMMD3', 'AMTN', 'ZNF646', 'SYNE1', 'MRPS12', 'STK38L', 'NUP88', 'NXF1', 'DEF8', 'ABHD16B', 'ODAM', 'NMB', 'PYCRL', 'MFSD6', 'C14ORF1', 'MRC1', 'VSIG10', 'PIP5K1B', 'FUOM', 'LDB1', 'ABCG1', 'STAU2', 'SCAND1', 'POLD4', 'NAALAD2', 'KLK6', 'CD19', 'SLC35B4', 'ZNF814', 'STEAP1', 'LIMD1', 'ZNHIT1', 'LYAR', 'LINC00320', 'RBM48', 'CACNA1H', 'CLUH', 'NLGN1', 'MMAB', 'SNORD94', 'PATE1', 'ZNF43', 'DDX6', 'SLC35F2', 'IDH1', 'NRIP3', 'ACPT', 'NYAP1', 'CDS2', 'DEFB128', 'TMEM43', 'MEGF9', 'LRRC17', 'TDRD7', 'PARP3', 'NCOR2', 'CABP4', 'SLC22A23', 'TMEM2', 'TMSB15A', 'LOC100133669', 'HHLA1', 'BTNL3', 'SLC4A1AP', 'FAM171A1', 'MROH6', 'ZNF282', 'CCAR2', 'RBFOX2', 'COPS5', 'HELZ2', 'ADCY3', 'HADHA', 'SHB', 'PSMD9', 'NIPSNAP3A', 'PRM3', 'MCU', 'LINC00473', 'ALPI', 'GNGT1', 'MIB1', 'ELFN1', 'CDC26', 'SDCBP', 'PTPRC', 'PRDX1', 'WHSC1L1', 'ZSCAN5A', 'SNHG4', 'GPR63', 'METTL22', 'ATP6V0C', 'CTSL3P', 'ZNF644', 'DSCR4', 'TRIM37', 'USP38', 'CYP2E1', 'SYT3', 'ALKBH8', 'ANKZF1', 'UNK', 'DEDD', 'KHDRBS2', 'GALNT14', 'SCCPDH', 'ZNF738', 'CLEC3B', 'SCARNA14', 'KHSRP', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.7614561855122278 Spearman Correlation: 0.7657651298370135 Coefficient of Determination: 0.5798154879865105 RMSE: 0.29234844387785336 NRMSE: 0.10600515755922264 MAPE: 197.76116859719613 Pearson Correlation: 0.24579762269571492 Spearman Correlation: 0.2661903515006422 Coefficient of Determination: -0.56117559469821 RMSE: 0.618140050903146 NRMSE: 0.17186072173577424 MAPE: 306.2723980959034 Predictor: ElasticNet Pearson Correlation: 0.443101412686057 Spearman Correlation: 0.47268306339681765 Coefficient of Determination: 0.058882658868042226 RMSE: 0.4375247791767548 NRMSE: 0.15864590396819095 MAPE: 228.04972368577543 Pearson Correlation: 0.39103261148401763 Spearman Correlation: 0.424571378695495 Coefficient of Determination: 0.028413134948031105 RMSE: 0.48764280898733164 NRMSE: 0.13557873329737447 MAPE: 153.2453099738206 Predictor: RandomForests Pearson Correlation: 0.5789385919280957 Spearman Correlation: 0.6047336407177734 Coefficient of Determination: 0.31530649881589456 RMSE: 0.3731890301591325 NRMSE: 0.13531784680174647 MAPE: 227.96402196768577 Pearson Correlation: 0.3800535928673885 Spearman Correlation: 0.37558323669871196 Coefficient of Determination: 0.12129112806772313 RMSE: 0.46374956203813067 NRMSE: 0.12893572309394055 MAPE: 156.20438036251002 Fold: 4 Protein: RB1 x_train_column_count: 371 x_train columns: ['PRAMEF4', 'INS-IGF2', 'DNAH17', 'RGSL1', 'FAM153B', 'B4GALT5', 'OPN4', 'HIST1H1A', 'PYGO2', 'DDX46', 'CUL3', 'AMPD2', 'ACAD9', 'HKR1', 'TMEM50B', 'PLIN5', 'CYLC2', 'KLRC2', 'MMP7', 'GPN2', 'CYB5D2', 'VPS35', 'B4GALT1', 'SNORD116-25', 'NCR3', 'LOC493754', 'STRN3', 'ENG', 'PAQR3', 'HES2', 'ZNF208', 'LINC00599', 'HYAL1', 'ITGA2', 'RASSF4', 'CD55', 'WDR86', 'FAM99A', 'GTF2IRD1', 'A1CF', 'CPSF2', 'BNIPL', 'LOC100129935', 'SSBP4', 'PPAP2B', 'GYG1', 'HRG', 'NEUROG2', 'DAPP1', 'MCTS1', 'VBP1', 'ZMYND15', 'SCARNA15', 'KLF15', 'SNORD115-25', 'LEPROT', 'ZNHIT1', 'GGTLC1', 'BTBD16', 'TAS2R10', 'RNASE2', 'CT45A2', 'KDM3A', 'OR2D2', 'TARBP1', 'MSANTD1', 'PIGG', 'ADGRG5', 'SAPCD1', 'METTL6', 'SYNGR3', 'KIAA1715', 'ANGPTL7', 'RPL15', 'FSD2', 'GNS', 'GALNT3', 'FYN', 'DUXA', 'CYP46A1', 'C16ORF92', 'GRIK1-AS1', 'NLRP4', 'PRDM1', 'CAB39L', 'TEX13A', 'SDK1', 'SAMM50', 'SLC6A8', 'RASL10B', 'RNF103', 'DAD1P1', 'CEBPZ', 'SIGLEC10', 'SSFA2', 'BNC1', 'SUCLA2', 'OR5D18', 'PBDC1', 'IL12RB1', 'C19ORF80', 'OR13G1', 'ALOX5', 'PAK6', 'IFI30', 'KLHL4', 'SOST', 'WIPI1', 'SLC18B1', 'SNORA81', 'A2ML1', 'OR2B11', 'CCDC91', 'ALDH1L2', 'ABCC9', 'RDH14', 'SNORD116-23', 'SYT12', 'OR3A1', 'TGM7', 'KCNK13', 'USP45', 'RXFP1', 'FTHL17', 'ASCL3', 'TVP23B', 'TM2D2', 'LRRC37A', 'POLL', 'MRPL50', 'ABCA12', 'SOX8', 'MXRA5', 'ZNF337', 'HNRNPA3', 'PCED1A', 'SLC6A2', 'HPYR1', 'NEFH', 'MED29', 'RAB3C', 'DNAH11', 'UHMK1', 'EFNA2', 'XKRX', 'POTEM', 'PCDHB17P', 'PAQR9', 'LOC285847', 'ZNF845', 'BRSK2', 'RPL32', 'IARS2', 'TRIML2', 'BOP1', 'ZNF221', 'PRSS3', 'TMCO4', 'HIST1H2AJ', 'LAMA5', 'INTS12', 'PKHD1L1', 'SGOL2', 'RNY4', 'ZNF609', 'CYP1B1', 'WDR90', 'EBAG9', 'FIBP', 'ZSWIM6', 'CMTM5', 'SH3PXD2A', 'ATXN10', 'BCAR3', 'MAP3K10', 'KIAA0556', 'ARSH', 'CKLF', 'OR9A2', 'ATP13A5', 'HBA2', 'C17ORF89', 'AKAP14', 'TMED6', 'SPCS2', 'FAH', 'KRT14', 'FBXO16', 'PSMB6', 'CCL4L1', 'KRT222', 'PER1', 'FOXA1', 'SORCS1', 'DAZ4', 'OR4F17', 'MUC13', 'MRPS18B', 'PCNXL3', 'CLDN18', 'GPR37', 'CCL19', 'RFPL3S', 'LRRC3', 'FOXE1', 'DHCR7', 'UGT2B28', 'PLOD3', 'TAS2R7', 'RP1', 'RTN4RL2', 'ANPEP', 'KLHDC4', 'CAPRIN1', 'TIFA', 'SCARNA9L', 'VTI1A', 'FAM157B', 'MYO1C', 'RABL2B', 'ERICH3', 'DDX27', 'NKIRAS1', 'PHKB', 'CECR5', 'TWISTNB', 'DNM1L', 'XRCC6BP1', 'LRRC57', 'PPP1R36', 'CYBRD1', 'SSX2IP', 'HIST1H2BH', 'RBBP8NL', 'CCDC50', 'CABIN1', 'NUP133', 'UFSP2', 'RASA2', 'MAL', 'COL23A1', 'NOL4', 'TMEM235', 'GPR143', 'CCDC69', 'PHLDA2', 'MIER1', 'GFOD2', 'CDC20B', 'NDUFB6', 'THBS2', 'USP43', 'ANKRD28', 'PNPT1', 'CT45A5', 'SAV1', 'GP5', 'SPTSSB', 'TBCE', 'TAF1C', 'CACNB2', 'FAM169B', 'CYP1B1-AS1', 'ZNF584', 'C4ORF33', 'NEK1', 'SNRPD2', 'RPL8', 'DUSP9', 'PMS2P5', 'HPD', 'PIK3CG', 'SLC28A2', 'SYPL2', 'HMMR', 'TRIT1', 'GEMIN7', 'OR6A2', 'ADTRP', 'B4GALT2', 'MFSD4', 'REC114', 'SLC25A12', 'DMWD', 'C18ORF8', 'ANKAR', 'WASH2P', 'RANBP10', 'BEND3', 'TTC29', 'CXORF40B', 'SYNGR1', 'HSPA5', 'PTPN5', 'TMEM176B', 'EVI5', 'ZNF385D', 'VWCE', 'KAT2B', 'PLK1', 'ZNF34', 'VPS33B', 'MAL2', 'ODF4', 'UBXN1', 'C16ORF52', 'ATAD3C', 'FGF20', 'ARHGAP44', 'GCC2', 'DNAJC6', 'KCNIP4', 'SPP1', 'TXLNB', 'DDX28', 'CYP21A2', 'ASF1B', 'EXOC3L4', 'ZW10', 'CLSTN2', 'INF2', 'ZMAT5', 'LYZL4', 'OR4B1', 'CALCA', 'ZNF79', 'ADCY9', 'SLC5A7', 'INO80C', 'SLC5A6', 'XKR8', 'ZNF570', 'TBC1D14', 'DOCK2', 'HAVCR2', 'PLCB3', 'NUDT16L1', 'SLCO2B1', 'HIST1H4J', 'UBA2', 'HK2', 'MLH1', 'MAATS1', 'DUSP16', 'CACNA1S', 'ARHGEF9', 'IRF2', 'MYO1D', 'BPIFA4P', 'EPHB3', 'HIST1H4K', 'LRRC3B', 'NHLH2', 'TGOLN2', 'ISG15', 'C1RL-AS1', 'XKR4', 'SAA3P', 'HDHD1', 'NBN', 'MAPRE1', 'LPGAT1', 'AMER2', 'ATP8A1', 'FLJ25758', 'GRXCR1', 'IPO5', 'ZNF502', 'NCL', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.8497345857928936 Spearman Correlation: 0.77938896534861 Coefficient of Determination: 0.7220488600397008 RMSE: 0.13259920943566902 NRMSE: 0.048492981800639635 MAPE: 515.0477122921576 Pearson Correlation: -0.02117990463538697 Spearman Correlation: 0.09460716467786381 Coefficient of Determination: -18.367957915018852 RMSE: 0.725631425454088 NRMSE: 0.6952357197850841 MAPE: 530.2814740328989 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: RandomForests Pearson Correlation: 0.6129212724753924 Spearman Correlation: 0.476920335914512 Coefficient of Determination: 0.18356652588176814 RMSE: 0.22725691473185022 NRMSE: 0.08311034037882176 MAPE: 154.7826051935556 Pearson Correlation: 0.10282976864281752 Spearman Correlation: 0.16021396775520894 Coefficient of Determination: -0.0790411688421846 RMSE: 0.17127468353767877 NRMSE: 0.16410022183888281 MAPE: 95.01364834025748 Protein: CDH1 x_train_column_count: 836 x_train columns: ['TM9SF1', 'PPP1R3E', 'SNX4', 'ARHGAP5-AS1', 'LEMD2', 'PROCR', 'BRAF', 'PTGER3', 'ZFY', 'SNORD38A', 'CYP1B1', 'FMN1', 'IGLL1', 'ATP1B1', 'VILL', 'E2F5', 'GLOD5', 'HGSNAT', 'LYRM1', 'VWF', 'EIF2B2', 'SOX17', 'RPUSD4', 'GBF1', 'FCHSD2', 'HIST1H3D', 'C3ORF79', 'E2F6', 'CYBB', 'BRINP2', 'DLK2', 'C20ORF195', 'TAT', 'SRSF5', 'TRIP11', 'TAGLN2', 'CYP2B7P', 'RAP1B', 'ADGRG5', 'COLQ', 'C9ORF78', 'OR2A25', 'MEFV', 'ARX', 'MYLK', 'CLCA3P', 'ATF7IP', 'CSGALNACT2', 'C16ORF54', 'GALE', 'ABHD12B', 'CCNT1', 'TMEM50A', 'CCDC74B', 'ASTN1', 'LINS', 'CAP1', 'CCL20', 'MYO1D', 'C7ORF73', 'TAP2', 'PEBP1', 'SV2C', 'GEN1', 'ADA', 'NCF1', 'ASIC4', 'AIFM2', 'DGCR11', 'TAF6', 'MRPL28', 'NPTX2', 'PRR23C', 'C17ORF82', 'BPIFB6', 'SULT2B1', 'C17ORF97', 'FAM155A', 'GIPC1', 'LINC01098', 'VWA5B1', 'ZNF446', 'ZNF280B', 'LGALS9C', 'FGF16', 'SPTLC3', 'PHF12', 'USH2A', 'ARMC1', 'SLC26A3', 'C2ORF48', 'ZFYVE16', 'SUMO1P1', 'RAB2B', 'SIGLECL1', 'LINC00602', 'COL27A1', 'ANPEP', 'DGKQ', 'AQP3', 'GP1BA', 'SNORD116-23', 'CCDC54', 'EPHA4', 'PARD6G', 'SLC16A14', 'CYB5B', 'DOC2B', 'TCEAL3', 'GSPT1', 'OR51G2', 'FAM98C', 'ANKS4B', 'RGS10', 'GPR141', 'ASB16-AS1', 'TMEM163', 'PCNA', 'PRSS48', 'SNHG12', 'GABRB2', 'PMS2CL', 'BZRAP1', 'SI', 'LPCAT2', 'PRRC1', 'HECW2', 'RHBDD1', 'TYROBP', 'PRKAR1B', 'ZNF462', 'TP73', 'TXNL4B', 'GPER1', 'TIMD4', 'NEUROD2', 'CEP162', 'SNORD68', 'OSBPL10', 'PRDX3', 'BTLA', 'GRK6', 'GHRLOS', 'CD209', 'HGH1', 'RNPS1', 'LCN12', 'NBEAL2', 'ZNF594', 'SPACA1', 'IL2RB', 'RBP7', 'ZNF571', 'WASH7P', 'PTPN11', 'HAR1A', 'THUMPD3-AS1', 'SEMA4C', 'CCDC121', 'LBP', 'CNFN', 'PPP3CC', 'CRSP8P', 'SKIV2L', 'GNE', 'ANAPC4', 'TBX15', 'TOMM40L', 'PSORS1C1', 'SPATA2', 'CPEB2', 'THAP10', 'OR6C70', 'CALB2', 'LOC399815', 'EXOSC8', 'CNTNAP3', 'KLC4', 'IDH3B', 'SNTB1', 'RBMY1A3P', 'PPP2R3B', 'TMEM248', 'PTGR1', 'KRT37', 'LDOC1', 'BIRC3', 'SCFD1', 'LRWD1', 'NIPA2', 'NXNL2', 'SSBP1', 'WDR91', 'TNNI3K', 'KCNJ8', 'TRANK1', 'ARHGEF26', 'AGPAT9', 'ALDH16A1', 'ZCCHC10', 'NUP54', 'TMEM200C', 'SELK', 'SNORA52', 'GLRX3', 'SENP3', 'NDUFB9', 'PIAS1', 'PPAT', 'ZNF280A', 'SBSN', 'EPG5', 'MTERF4', 'RNF165', 'CST13P', 'SCRN2', 'TSPAN18', 'TBCK', 'KRTAP17-1', 'OR8I2', 'SGCZ', 'POLR1C', 'ENAH', 'LOC100132287', 'SNORD45B', 'DHX57', 'LOC100129935', 'ATP6V1G1', 'SLC44A5', 'RPS26', 'FAM179B', 'AGMAT', 'ZNF350', 'INSL5', 'GYS1', 'PPP2R5E', 'SUSD6', 'OR4C13', 'FAM102B', 'CEL', 'NUP85', 'KIAA1919', 'KIAA0020', 'IL21', 'ZNF207', 'COL11A1', 'ZNF638', 'MEIS2', 'ABCB5', 'C12ORF57', 'FOXL2NB', 'PURA', 'TAS2R46', 'VGF', 'TMEM55A', 'CRLF1', 'NUTM2A-AS1', 'LY86', 'COL6A4P1', 'LIN52', 'EPHB3', 'DHRS4-AS1', 'CHD1', 'DHH', 'ENO3', 'SAMM50', 'GAD2', 'SRP54', 'ZBTB1', 'IQSEC3', 'RPS6KA6', 'OIP5-AS1', 'BCO1', 'CAPN5', 'DUSP21', 'MRPL3', 'DPH7', 'DTHD1', 'PCDH17', 'DNAH5', 'PRIMPOL', 'ACAA2', 'RASSF2', 'CUL5', 'PCGEM1', 'TTTY11', 'BAZ2B', 'NCLN', 'ARHGEF18', 'DENND1B', 'AGT', 'ALDOA', 'GGT8P', 'KCMF1', 'CXXC5', 'SLC10A5', 'USP34', 'MARCH4', 'MAB21L3', 'STEAP1B', 'MTMR6', 'NEK2', 'SSTR4', 'NCBP1', 'ZBTB34', 'LRAT', 'DAW1', 'ZNF160', 'DLX6-AS1', 'PKIA', 'PAX6', 'PHGR1', 'ARHGAP11A', 'ATG7', 'LRRC37BP1', 'LEAP2', 'C9ORF142', 'ZNF415', 'RPRM', 'PAQR4', 'WDR93', 'ZNF280C', 'STEAP2', 'EPS15', 'SH3BP2', 'IFI6', 'PKLR', 'CDH19', 'SNORA65', 'KRT73', 'STAT6', 'KDM5A', 'SLC32A1', 'THAP5', 'MXRA7', 'FAM86JP', 'ALDH9A1', 'TGS1', 'FAM74A1', 'ZNF530', 'SPATA8', 'NPLOC4', 'GPR87', 'CHN1', 'TIMM8B', 'DOK5', 'BBS7', 'EIF6', 'TTL', 'SLC36A4', 'PRF1', 'ABRA', 'UBXN2A', 'EIF1AX', 'EIF2B4', 'MRPL1', 'GTF2H1', 'ABCG5', 'IGF2BP2', 'SEPT9', 'CSDE1', 'RFPL4B', 'AQP12B', 'MED25', 'AQP2', 'USP38', 'SDHAF3', 'ADD1', 'KIF26B', 'ATAT1', 'STAT3', 'ASB11', 'SEC23B', 'HERC1', 'IFNA13', 'HTN1', 'ZNF680', 'CYTIP', 'PIGO', 'BCL10', 'LDB1', 'MXRA8', 'METTL7A', 'GRM7', 'TCF19', 'PTGFR', 'ARSB', 'RAB15', 'ROS1', 'OIP5', 'ALPPL2', 'MAGI2', 'JMJD1C', 'FCHO2', 'SLC25A42', 'SERINC4', 'DICER1-AS1', 'BCL9L', 'COPS5', 'KRT80', 'CAV3', 'GGT3P', 'FHDC1', 'SH2D7', 'BCORP1', 'PDLIM5', 'ARSG', 'H1FX', 'DYTN', 'ZFP30', 'LOC100130331', 'NOL4', 'ATP5G1', 'LTBP2', 'CLDN7', 'ZNF587', 'ASB6', 'MAVS', 'DDT', 'COL1A2', 'HHIPL2', 'WFDC2', 'ZBBX', 'SCN1A', 'NIPAL4', 'SEPT2', 'RFT1', 'PFN4', 'OR52K2', 'RAB3A', 'H2AFX', 'LINC01128', 'COMMD5', 'EML4', 'MAGEA6', 'C2ORF50', 'COX19', 'EXOC5', 'TRIM13', 'CAPNS2', 'CNTN6', 'SNAP23', 'TCTA', 'HRASLS', 'UNC93A', 'REEP5', 'TDRD1', 'SNORD121A', 'HES5', 'MAP3K13', 'GNPDA1', 'VDAC3', 'FBXO6', 'TRAF4', 'RASSF8', 'TRIM66', 'C7ORF69', 'AOX1', 'GATS', 'THRSP', 'ARNT', 'AKAP3', 'CCNA2', 'SLC2A11', 'GSKIP', 'GSTM2P1', 'AMBRA1', 'SNORD123', 'FARP2', 'PTK6', 'SNX6', 'SVIL', 'TPD52', 'SH2D1A', 'MATN1', 'PLD5', 'SPAG11A', 'PTPN9', 'LDAH', 'MFN1', 'ADCK2', 'SNORD49A', 'MEOX2', 'TMEM167B', 'EVA1A', 'GPR52', 'SNORD1A', 'TTTY17B', 'CX3CL1', 'DOCK10', 'MTA3', 'SDF2', 'EMB', 'SFT2D3', 'SESN1', 'SMYD1', 'CLCN4', 'LRP12', 'WFDC11', 'SOX5', 'SLC25A14', 'ARHGAP1', 'SPATA25', 'ZNF781', 'STC2', 'PXDN', 'KIAA0226L', 'SYN3', 'TBCE', 'LILRA5', 'ABCA2', 'RNF19A', 'RSPH3', 'AATBC', 'ARID2', 'TPM1', 'ABHD2', 'C10ORF105', 'SNORD115-17', 'TRIP12', 'GSS', 'LOC344967', 'ZNF527', 'SLC26A11', 'KIF3C', 'HEG1', 'CLTCL1', 'RASGRF1', 'CLU', 'CCDC38', 'SLC26A4', 'CKM', 'THNSL1', 'XYLT2', 'CD3E', 'IKZF5', 'PCSK6', 'IGFBP2', 'ACOT1', 'SPPL3', 'SNX25', 'UNC13D', 'GSTO1', 'MRPS22', 'TBC1D3P2', 'KANSL2', 'ARRDC4', 'C16ORF46', 'KANSL1', 'APBA2', 'DIO3', 'GSTT1', 'LOC284578', 'ARHGAP35', 'PLN', 'CNOT3', 'DPY19L2P2', 'C1QTNF8', 'PHAX', 'NPAP1', 'CRELD2', 'KDM4A', 'SCN1B', 'ZNF770', 'WNT8A', 'AEN', 'HTT', 'KLHL33', 'SNAP29', 'MTCH2', 'AMDHD2', 'LMO3', 'AHCYL2', 'REXO1L6P', 'TTC21B', 'SNORA71C', 'XBP1', 'ATP6V1C1', 'RAB35', 'TMEM2', 'KLHL25', 'GPR3', 'SDF4', 'FCMR', 'FERD3L', 'KRTAP4-11', 'TMEM263', 'SETMAR', 'MRC2', 'ABLIM3', 'EDEM1', 'GPR160', 'TRNT1', 'HRASLS2', 'EMCN', 'NR1I2', 'PLIN3', 'TCEA2', 'KRT74', 'C10ORF32', 'NEIL3', 'TRAPPC11', 'DENND6A', 'ZNF830', 'C18ORF8', 'TRAPPC3', 'TSHZ3', 'GTPBP4', 'DCAF12', 'ZNF697', 'C1QTNF9B-AS1', 'KLHL40', 'HLA-J', 'NIPAL2', 'CYP26B1', 'SNORD45A', 'CTDSPL2', 'PRR19', 'PSMD5', 'AMER1', 'CCDC168', 'PNRC1', 'C2ORF54', 'CALHM1', 'CATSPERG', 'KCNMB3', 'FAM73A', 'SNORD79', 'PHOSPHO1', 'NXPH3', 'IFT27', 'SMCO1', 'VNN1', 'FBN3', 'GNA12', 'GNPTAB', 'RAVER2', 'TFCP2', 'HMP19', 'TMEM261', 'RNASE6', 'KCNN2', 'REST', 'GTSE1', 'SAYSD1', 'CCDC66', 'UBE2C', 'C8ORF82', 'POLR3GL', 'C6ORF1', 'TARS', 'CDHR5', 'FCRL2', 'EED', 'MAN2C1', 'ISX', 'SCD5', 'AGFG1', 'TRPT1', 'ULK1', 'TLE4', 'RRP1', 'LANCL3', 'SCARNA20', 'UBE2DNL', 'TNFRSF10D', 'TMEM201', 'ZC3H12C', 'GNPAT', 'LINC01551', 'CSN3', 'ZNF675', 'EMBP1', 'OR6C6', 'CD24', 'COL11A2', 'TMEM177', 'CAD', 'GNAS-AS1', 'A2M-AS1', 'ACTN1', 'TRIM10', 'C1R', 'MTHFR', 'LOC100128288', 'ILDR2', 'OMG', 'GLP2R', 'TSEN54', 'VPS36', 'RPSAP9', 'UNC5D', 'MED12', 'ABCC10', 'AWAT2', 'SNORD113-7', 'CBX2', 'LOC647859', 'SPEF1', 'LINC00298', 'OR51F1', 'SLC25A1', 'RPL31P11', 'XPO6', 'NANS', 'TBC1D2B', 'APMAP', 'LYSMD3', 'ZNF804B', 'ANGPTL5', 'UBE2V2', 'ABCA9', 'SLC7A2', 'FBRSL1', 'PRPF3', 'DCDC2', 'TIMM21', 'LRRK1', 'PLCD3', 'GNAI3', 'TEX10', 'PRMT6', 'ERMP1', 'SERPINA7', 'E2F7', 'TSR2', 'POR', 'DIRC1', 'POU6F2', 'GCNT1', 'ELL3', 'SYTL5', 'MBOAT2', 'MCPH1', 'PHLPP1', 'SNCG', 'MMP7', 'ARFGAP3', 'CALCOCO1', 'SORBS1', 'SDHD', 'PEA15', 'G3BP2', 'MLH1', 'RBMY1A1', 'C10ORF107', 'METTL7B', 'FDX1L', 'DHODH', 'HIRIP3', 'RBMXL3', 'SCNN1G', 'MGAM2', 'SEC14L3', 'HHIPL1', 'HOXB13', 'FASTKD5', 'C17ORF105', 'CLTC', 'HEPHL1', 'CSN1S1', 'KRT81', 'TSPAN17', 'JAM2', 'ANKRD34C', 'C9ORF116', 'RASSF4', 'FER', 'RAB6C', 'CLEC1A', 'NT5C3A', 'CEP131', 'RFPL1S', 'RTP4', 'TBC1D3H', 'NEDD9', 'MYO9B', 'FAM46A', 'CSRP1', 'ACER1', 'PIFO', 'FGD3', 'TTTY9B', 'BACE1', 'COQ3', 'PZP', 'CCL27', 'MBTPS2', 'CEP350', 'SAP30L', 'PIGA', 'LOC340017', 'CTRB2', 'RPS6KA2', 'CHRNA9', 'RXFP2', 'BCL3', 'TRADD', 'OR4K17', 'UBALD1', 'HYPM', 'MAP3K4', 'LINC00879', 'DNAH7', 'ATG5', 'SNORD18B', 'CYP2B6', 'SFTPA2', 'PQBP1', 'GPR156', 'MED14', 'UPF3B', 'ATG101', 'ZNF628', 'SUSD5', 'PLEKHG7', 'C7ORF31', 'DCST1', 'SERPINB1', 'CHAC1', 'SLC6A1', 'PDIA6', 'SELV', 'CD19', 'RBM41', 'TAF8', 'CYB5D2', 'TUSC5', 'RFESD', 'ATP13A2', 'HOXB1', 'ECHDC1', 'CADM4', 'INTS8', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.16653721711603e-15 NRMSE: 6.634402116359399e-16 MAPE: 4.108255176655656e-12 Pearson Correlation: 0.3442957506210036 Spearman Correlation: 0.36968790134540336 Coefficient of Determination: -1.936021725689347 RMSE: 1.998686543859518 NRMSE: 0.3625932556618987 MAPE: 1205.952525415562 Predictor: ElasticNet Pearson Correlation: 0.6665067734765757 Spearman Correlation: 0.6583198440866431 Coefficient of Determination: 0.3491007065727112 RMSE: 0.902799632563904 NRMSE: 0.14375332514313302 MAPE: 438.70966443766395 Pearson Correlation: 0.6702329755571393 Spearman Correlation: 0.46245713786954956 Coefficient of Determination: 0.2853513773589328 RMSE: 0.986078152385534 NRMSE: 0.17889012597248538 MAPE: 264.0535879983287 Predictor: RandomForests Pearson Correlation: 0.7542353343021418 Spearman Correlation: 0.7065713923139662 Coefficient of Determination: 0.5639349527593356 RMSE: 0.7389415925213422 NRMSE: 0.1176621114807398 MAPE: 243.94127361843556 Pearson Correlation: 0.770205054508901 Spearman Correlation: 0.514126181760191 Coefficient of Determination: 0.5286082096226414 RMSE: 0.8008590054940639 NRMSE: 0.145288452068877 MAPE: 195.03862837423637 Protein: CDH2 x_train_column_count: 474 x_train columns: ['ZDHHC18', 'KIR2DL3', 'NQO2', 'GRK7', 'DNAH10', 'ATP6V1C2', 'ZBTB6', 'BAIAP2L1', 'ADCK3', 'SNORD114-16', 'UNC79', 'METTL12', 'FGL2', 'MUTYH', 'CMTR2', 'KPNA7', 'PNPLA6', 'RBM7', 'ERMARD', 'ASCC3', 'WNT16', 'MOGAT1', 'GCM1', 'PLA2G4F', 'ZPR1', 'FAM177B', 'LRIT3', 'SLC25A19', 'TLL1', 'SYT17', 'C4ORF32', 'RPL27', 'TTTY21', 'ACSM4', 'MGAT5', 'MRPL27', 'BTN1A1', 'KLK10', 'HAVCR1P1', 'EIF4E2', 'TSTD1', 'LOC646813', 'FILIP1L', 'SNHG10', 'DSCAM', 'LINC00928', 'RAET1E', 'PPAT', 'ZPBP', 'HAPLN2', 'CUX1', 'CIB2', 'NINJ1', 'H3F3AP5', 'UNKL', 'BAZ2B', 'NAB1', 'SSTR5-AS1', 'PRSS58', 'GPR85', 'RABGGTA', 'FJX1', 'TMED7-TICAM2', 'GBA3', 'LMBRD2', 'C5ORF63', 'KGFLP1', 'AKAP6', 'NXF2B', 'RORB', 'KIF3B', 'DACH2', 'RCC2', 'MMP12', 'LINC01341', 'CXCL13', 'AUNIP', 'ORMDL2', 'PRSS41', 'PLAG1', 'TEX15', 'MLIP', 'TLR9', 'ZFP69B', 'AMZ2P1', 'COCH', 'ZNF624', 'LYZL4', 'CRABP2', 'TMX3', 'PGAM1', 'SNORA15', 'C19ORF48', 'PRNT', 'CHCHD6', 'LINGO2', 'FLVCR2', 'AVPI1', 'STRA13', 'SELM', 'RPAP2', 'CLYBL', 'CHCHD10', 'PCDHA7', 'RPL14', 'MOCS1', 'ZNF619', 'FLJ13224', 'UBE2L3', 'FKBP3', 'KIAA2022', 'IRGC', 'CHRFAM7A', 'SEPT10', 'LRR1', 'TRIM3', 'CSTF3', 'SSTR2', 'SNCG', 'C20ORF195', 'FAM169A', 'SSX2IP', 'MICAL3', 'MRPS31', 'STAC3', 'DNAJC15', 'C11ORF84', 'CDC42SE2', 'NKIRAS2', 'PTPRVP', 'RBM12B', 'CMPK2', 'ABCC5', 'NVL', 'CACNB2', 'TACSTD2', 'NLRP8', 'HIST2H2AC', 'DNAJB6', 'INHBA-AS1', 'SNORD119', 'ZNF382', 'MS4A13', 'C1ORF116', 'MIB2', 'OPN5', 'LOC148709', 'TAX1BP1', 'LAMTOR1', 'ZNF564', 'CD300LG', 'GNB1L', 'PPDPF', 'OR2J2', 'LDLRAD2', 'S1PR5', 'PCDH7', 'NKTR', 'CTHRC1', 'PRSS33', 'RAB8B', 'LRRC57', 'FBXL22', 'RBP3', 'HHLA3', 'PDIA5', 'ECT2L', 'ARNTL', 'SNORD116-1', 'ITSN1', 'USP16', 'C9ORF171', 'EPM2AIP1', 'SMARCE1', 'BCL2L1', 'CDKN2D', 'APOC2', 'LINC00620', 'TUBB6', 'BPIFA1', 'MAD2L2', 'RPS23', 'OPHN1', 'NTM', 'SAP30L', 'MIS18A', 'MAPT-AS1', 'CPT1A', 'SLC26A2', 'ELF4', 'INSL5', 'PRKRIR', 'GSTZ1', 'CDC37', 'LYPLA1', 'UBE2D4', 'FAM71A', 'MRPL20', 'TPX2', 'C17ORF85', 'LINC00189', 'TCEAL1', 'SNORA70', 'C1QBP', 'MIR155HG', 'FAM84A', 'TEAD1', 'C6ORF163', 'MYOM2', 'ITGB3', 'CERCAM', 'TAF4B', 'TRA2A', 'RAB43', 'RNF17', 'GFRA1', 'EPC1', 'LINC00652', 'AQP8', 'RTCB', 'MYH7', 'ZNF784', 'DCANP1', 'RPS27L', 'TICRR', 'EHBP1L1', 'FAM228A', 'POMP', 'ELMSAN1', 'MTCL1', 'ARHGEF16', 'OR51G1', 'GOLGA6L6', 'ITGA3', 'RPL23AP53', 'PSME3', 'CMTM5', 'FAM179B', 'DRAIC', 'BDP1', 'LOC728554', 'ZNF565', 'USH1C', 'C5ORF28', 'DHCR7', 'TRIM50', 'HDX', 'FAM126A', 'RAD9B', 'GINS4', 'PCYT1A', 'RRAGA', 'PRDX5', 'RBM24', 'PCDHGA5', 'TNFSF4', 'GPD1L', 'GOLGA3', 'DLX3', 'SOSTDC1', 'FCN2', 'HSPB11', 'SPRY2', 'MBD5', 'TTTY1B', 'OR6C75', 'SMTNL1', 'PGPEP1L', 'SOD2', 'COL24A1', 'SNX24', 'MORF4L2', 'IL17RC', 'TNFRSF4', 'TAS2R13', 'IRF4', 'DKK2', 'SLC10A6', 'PITPNA', 'S100G', 'WDR72', 'ATP7B', 'HNRNPUL1', 'ADARB2', 'CAMKMT', 'SNORD29', 'HIF1A', 'CCDC113', 'POLD1', 'HSBP1', 'BPY2', 'BTNL9', 'OR4N4', 'FAM178B', 'PHLPP1', 'TAAR8', 'GID8', 'CDH11', 'PXT1', 'TM4SF1', 'CTNNA2', 'ANXA2R', 'PLAC1', 'TCP10L2', 'IL24', 'LINC01599', 'CGA', 'FOXN2', 'MESTIT1', 'SRD5A3', 'NCL', 'PITX3', 'CTAG2', 'PAX2', 'BCRP3', 'FAM201A', 'CAAP1', 'SNRPD3', 'ADAD1', 'SCAND2P', 'LIN52', 'CACFD1', 'FAM120B', 'LOH12CR1', 'C1ORF189', 'RBBP9', 'CYB561A3', 'TOB2P1', 'DNAJC10', 'SLC45A2', 'P4HB', 'OTUD5', 'LINC01558', 'PPRC1', 'PRG2', 'SNORD35A', 'LOC400043', 'MIPEP', 'GNB1', 'TULP2', 'TIMM9', 'FAM222A', 'DAPK3', 'PRR23C', 'DTNA', 'ARL10', 'CDHR1', 'SMC6', 'NLGN2', 'COA7', 'DNAI1', 'KCTD2', 'RNF169', 'RAD18', 'PURB', 'ADAR', 'IL17C', 'TSPEAR-AS2', 'PNPLA8', 'ADPRM', 'WFDC8', 'CD27-AS1', 'CMIP', 'ESCO2', 'TMEM141', 'CLCF1', 'CA5B', 'SNORD111B', 'STRADA', 'DPP4', 'COQ5', 'SLC22A9', 'SPOCK2', 'DYNLT3', 'ELMOD3', 'DCP2', 'UBE4A', 'ING2', 'PTGDS', 'SLC6A1', 'ERCC6L', 'OR6C2', 'FAM196A', 'PTPRU', 'HMGN3', 'LRRC47', 'RPL6', 'MAD2L1BP', 'GSR', 'KIF22', 'LINC00113', 'DKKL1', 'TRMT5', 'PPP3R2', 'RNF168', 'GLDC', 'TACR3', 'SRFBP1', 'SPATA2', 'ATG4B', 'DDX28', 'EFNB3', 'RBM28', 'XAGE5', 'SPATA20', 'TMEM241', 'ZNF735', 'C15ORF61', 'PSG11', 'FAM110B', 'RAD51D', 'LINC00298', 'SNORA8', 'CERS4', 'NPIPB5', 'KRT36', 'JADE2', 'PPP3CB', 'JRK', 'CDNF', 'SAP30', 'CCK', 'PDIK1L', 'MPP7', 'OR4L1', 'PAG1', 'SLC7A6OS', 'FMNL1', 'SAP30BP', 'STARD5', 'PNPLA7', 'PNLDC1', 'CYP2S1', 'LOC113230', 'DBR1', 'ZNF562', 'TMF1', 'HMGN2P46', 'HIST2H2BA', 'CIDEB', 'FAM58BP', 'LOC284441', 'CCDC150', 'SNAPC1', 'P2RY13', 'PALM2-AKAP2', 'TSSC2', 'KIAA1324L', 'TM9SF2', 'CHRNA3', 'AES', 'ZMYM4', 'COL19A1', 'NECAB1', 'LEPR', 'TCP11L2', 'LRRTM1', 'C10ORF131', 'HEPHL1', 'RTP5', 'CEACAM22P', 'LCN15', 'SPATA41', 'EFEMP1', 'GOLGA7', 'MCTS2P', 'S100A7L2', 'BASP1', 'FABP3', 'FOXD1', 'MTG1', 'SOBP', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.9345803155500924 Spearman Correlation: 0.9143781294206099 Coefficient of Determination: 0.8734205294335077 RMSE: 0.13496999169379503 NRMSE: 0.048905714795925447 MAPE: 2593.6941091747017 Pearson Correlation: -0.011339821696640436 Spearman Correlation: 0.1199591017344356 Coefficient of Determination: -116.47888465329478 RMSE: 3.6122039329980686 NRMSE: 1.8634207899994162 MAPE: 2603.234522203429 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: RandomForests Pearson Correlation: 0.5401107096222652 Spearman Correlation: 0.4901312975090961 Coefficient of Determination: 0.17750205196522295 RMSE: 0.3440511353274133 NRMSE: 0.12466524216516173 MAPE: 819.7506995313666 Pearson Correlation: 0.11267855985203902 Spearman Correlation: 0.11941545405803064 Coefficient of Determination: -0.027972760853781198 RMSE: 0.33789608296048523 NRMSE: 0.17430981127506356 MAPE: 144.17262702330785 Protein: CDH3 x_train_column_count: 75 x_train columns: ['DEK', 'NCSTN', 'PTGFRN', 'ARID5A', 'C11ORF54', 'ERP44', 'C10ORF95', 'NCK1', 'COL4A4', 'FIG4', 'PGBD2', 'ZBTB9', 'MYL9', 'OR4N5', 'SMPDL3A', 'MPP3', 'NRG4', 'ARHGEF10L', 'KRT24', 'ABCA11P', 'EVPL', 'KRTAP19-7', 'ZNF443', 'PRIMPOL', 'CHERP', 'TNFRSF11B', 'SH2D5', 'OR8G2', 'FGF21', 'TMEM155', 'FUT9', 'CTSS', 'ABCF1', 'SESN2', 'EEF2K', 'JAK3', 'LOC728323', 'TMEM194B', 'MYH9', 'ATP6V1C2', 'ITGA4', 'LOC646813', 'ZC3H11A', 'DCTN2', 'DIAPH3', 'HPN-AS1', 'DYTN', 'GLTSCR1L', 'OR5B17', 'ISLR2', 'IQCF3', 'MMGT1', 'KRTAP5-7', 'FRMPD1', 'EMP2', 'CELSR3', 'TCTEX1D1', 'NCAPH2', 'MTX1', 'COQ9', 'KLF2', 'GPR27', 'DDX11L2', 'PRRT4', 'FRA10AC1', 'LINC00202-1', 'CCR2', 'ADRA1D', 'CRHR1', 'MTMR8', 'CHRNB1', 'FBLN7', 'OR2T33', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.5556142116268171 Spearman Correlation: 0.5492786144144268 Coefficient of Determination: 0.30870641730065607 RMSE: 0.171202010683267 NRMSE: 0.12201349165676054 MAPE: 464.243934618791 Pearson Correlation: 0.22089913446530296 Spearman Correlation: 0.332834573997182 Coefficient of Determination: -0.18160088338132208 RMSE: 0.22587751055212388 NRMSE: 0.20104091581263137 MAPE: 736.2405051697227 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: RandomForests Pearson Correlation: 0.5531505604608413 Spearman Correlation: 0.5524297636979038 Coefficient of Determination: 0.23786963364234948 RMSE: 0.1797596572307162 NRMSE: 0.12811241731453468 MAPE: 386.2369377145887 Pearson Correlation: 0.4497677818371236 Spearman Correlation: 0.37440616466539484 Coefficient of Determination: 0.09943276643398002 RMSE: 0.19719489144391994 NRMSE: 0.1755121236839987 MAPE: 479.0213796241532 Protein: PTEN x_train_column_count: 886 x_train columns: ['MYCT1', 'CACNG6', 'ERCC1', 'UNC13D', 'LOC91450', 'WBSCR27', 'AADAC', 'EGFL8', 'ACBD4', 'LGALS12', 'EHF', 'ZNF155', 'KCNK16', 'CARD9', 'ATP5SL', 'PCDH20', 'OR51D1', 'KDELR2', 'LIPF', 'PIWIL4', 'ZRANB3', 'BAHD1', 'GRIK1', 'RINL', 'JADE3', 'IER2', 'SNORD116-3', 'FZD5', 'GNG7', 'TCEANC', 'KRTAP23-1', 'OR4C46', 'CLDN11', 'TMEM63C', 'PLK4', 'RAB34', 'TSG1', 'MPP5', 'NOX3', 'TNIP1', 'VCPIP1', 'RALBP1', 'IMP3', 'SYNDIG1', 'PRCC', 'PDHB', 'KPNA6', 'GOLGA7', 'SLC25A3P1', 'SUN5', 'R3HDML', 'HK2', 'PHF6', 'PIP4K2A', 'CROCCP2', 'SLC6A9', 'LINC00032', 'XPO6', 'FAM161B', 'HSBP1', 'ZNF676', 'SENP8', 'POLR3B', 'RFNG', 'GALNT13', 'MSX2P1', 'DMBT1', 'FAM98C', 'ADGRG3', 'CYP21A2', 'RP2', 'UNC5CL', 'YIPF5', 'SCGB1B2P', 'PADI1', 'TCAIM', 'RLN1', 'PGAP2', 'DGKD', 'SMAD6', 'CHIC1', 'TCEAL3', 'ST6GALNAC5', 'ISM1', 'PTBP3', 'PCDHGA2', 'CORO6', 'IER5', 'CENPP', 'KRT32', 'ZNF791', 'FER1L5', 'SMCR5', 'RPS2P32', 'GID8', 'ZDHHC13', 'GTPBP1', 'AARD', 'PCDHA4', 'SPRR2C', 'ZNF581', 'TMEM263', 'SPPL2A', 'SNAR-H', 'CARNS1', 'ARMT1', 'CAB39L', 'FAM179B', 'WNK1', 'XRCC4', 'PRR35', 'SH2D1B', 'LMOD3', 'REXO2', 'MRPL3', 'SIRT7', 'TTLL11', 'PRMT5', 'SLC8A3', 'XKR6', 'BCL2', 'PAX1', 'MMP1', 'GPIHBP1', 'DACT1', 'SYNRG', 'FOXM1', 'G6PC2', 'IQGAP3', 'GDPD5', 'DDC', 'MYO15A', 'MIA2', 'TMEM136', 'MPDZ', 'SLC6A1', 'COG3', 'LINC01591', 'ADGRF5', 'NKG7', 'ERGIC2', 'COX11', 'COX7B', 'SNORD114-20', 'PTGS2', 'SCCPDH', 'ST8SIA2', 'FAM162B', 'SMIM15', 'HS3ST1', 'ZBED2', 'TMEM59L', 'PRKCE', 'TMEM219', 'LOC645166', 'PDE3B', 'JAKMIP3', 'MIB1', 'RAB11FIP2', 'LAT2', 'DPH3', 'ZNF835', 'GPR19', 'SNX29', 'ZNF883', 'ESCO2', 'MRPS23', 'FFAR2', 'EEF2', 'ZDHHC17', 'SLCO6A1', 'IDH3A', 'GNB1', 'SEC63', 'ARFGAP1', 'VN1R4', 'WARS', 'SRSF8', 'CTSO', 'SLC32A1', 'SQRDL', 'TAF9', 'LINC00667', 'STARD3NL', 'CTDSP2', 'RPUSD4', 'TUBG2', 'LOC728392', 'ACPP', 'CACNG1', 'PSMA8', 'CDK5RAP3', 'GBA2', 'VPS51', 'XG', 'KLHL24', 'WDR60', 'SKAP1', 'DOCK2', 'MIR17HG', 'TMEM179', 'SNORD116-23', 'TBC1D3H', 'C9ORF64', 'C9ORF153', 'MAZ', 'NEU2', 'NT5C1A', 'FAM69B', 'ARMCX5', 'IL2', 'ZNF774', 'PDZD7', 'MS4A8', 'CEP290', 'ATXN7L3', 'IFI44L', 'MUL1', 'CCSER2', 'RUVBL1', 'CDH24', 'ZCCHC13', 'CRLF2', 'RHOBTB2', 'SLCO4A1', 'CSPG4', 'DYNC1LI1', 'TTTY17A', 'CPPED1', 'PRDX3', 'MORC1', 'TMCC3', 'GPR89A', 'C20ORF85', 'KDM3A', 'EXPH5', 'DNM3', 'MED1', 'TMEM156', 'KRT72', 'GSTZ1', 'HSFY1P1', 'C17ORF98', 'PEX11A', 'HLX', 'CIB1', 'LOC613037', 'TTC33', 'SPATA33', 'ZNF184', 'ARL14', 'LINC00298', 'EFHC2', 'PCDHB19P', 'OR10A4', 'POU4F1', 'FAM35A', 'DDX17', 'SLC25A20', 'AKNAD1', 'PPP1R1A', 'NELL2', 'VPS35', 'FBXO44', 'COX4I2', 'RPAIN', 'SLIRP', 'DNAJC1', 'STRADA', 'KCNQ3', 'BBC3', 'TFIP11', 'CLNS1A', 'ZNF514', 'MATR3', 'NHS', 'LINC00893', 'B4GALT7', 'PNISR', 'RBP3', 'MMAA', 'POC1B', 'HABP2', 'MGAM2', 'PVRL3', 'TFAMP1', 'SPNS2', 'DUSP4', 'PTDSS2', 'C1ORF95', 'SNF8', 'MOCS3', 'POLR2J', 'CCNB2', 'COA3', 'GIMAP4', 'SPAG4', 'BAK1', 'PAPOLG', 'TRAPPC2', 'GPR132', 'RCN3', 'ERLIN2', 'IQCJ', 'ISOC2', 'FDXR', 'RNF213', 'DCAF4L2', 'SMG1P3', 'MYBL2', 'WNK3', 'MB21D1', 'TRIM74', 'PLAA', 'PRL', 'FOXI1', 'GJB1', 'PIK3CD', 'TBCEL', 'C10ORF10', 'GALNT8', 'TTC31', 'RDH8', 'MEF2C', 'BAG3', 'SYT13', 'TMPRSS11D', 'MARCKSL1', 'C9ORF116', 'TCHH', 'MRPL21', 'TRAPPC1', 'ABCC10', 'MAGEA3', 'SNORD102', 'SPOP', 'BAG4', 'ZNF131', 'CARS', 'SPATA32', 'LINC01465', 'PCDH10', 'MEIS3P1', 'PTCD3', 'SCAND1', 'LOC202181', 'TCIRG1', 'ADRBK2', 'RSPRY1', 'PIK3R5', 'MGAT1', 'C3ORF79', 'TSC2', 'IZUMO4', 'OR2T2', 'SYCE1', 'ZNF772', 'TP63', 'NOC4L', 'GLRA4', 'SFRP4', 'F13B', 'GSTA5', 'NLN', 'IQUB', 'WARS2', 'OR4E2', 'IMP4', 'SNAR-A2', 'STXBP1', 'NUDT4', 'LURAP1', 'MDH2', 'FIBP', 'CCNT1', 'FGFBP2', 'APPBP2', 'NDNL2', 'FASTKD1', 'RAB4B', 'ZNF816', 'PITX3', 'CHRNB1', 'MYLK', 'SESN3', 'PIP5K1B', 'ASH2L', 'PLOD1', 'ARHGEF25', 'PCBD1', 'VTN', 'SEC13', 'TRIM53AP', 'GKN2', 'NPW', 'YEATS4', 'PPM1E', 'SULT1A1', 'DUX4L6', 'OSR2', 'INPP5E', 'CCDC13', 'FAM3C', 'CHRNA10', 'ECEL1', 'TMEM14E', 'TYRP1', 'CRP', 'SUOX', 'CHID1', 'TNC', 'NINL', 'RHBDD2', 'ARL6IP5', 'CATSPERB', 'C16ORF71', 'RBFA', 'MMADHC', 'CCDC102A', 'MMGT1', 'MYT1', 'REC114', 'TTTY17B', 'SLC25A51', 'WDR27', 'DNAJB14', 'GAS2L1P2', 'SNORA53', 'TMIGD1', 'EXOSC8', 'SSR1', 'TMEM126B', 'ILKAP', 'CDHR5', 'ISCA2', 'TLR1', 'RAB24', 'OR6W1P', 'YARS2', 'XRCC2', 'KRT10', 'CARD11', 'PSMA4', 'DNAJC5G', 'C11ORF86', 'MFSD12', 'KDF1', 'TIMM22', 'TMPRSS9', 'TBL2', 'MNX1', 'CDC34', 'NUDCD2', 'OR10K1', 'QSOX2', 'RASSF7', 'AADACP1', 'GPC5', 'NUDT5', 'GMPR', 'CCDC153', 'ASIC5', 'EPB41L4A-AS2', 'ACER2', 'GCG', 'MAGEB3', 'MIR100HG', 'PKIA', 'TMEM92', 'GOT2', 'AFAP1', 'UBASH3B', 'LAMA1', 'PRR15L', 'JMY', 'FAM65A', 'TMEM170A', 'ZNF70', 'RPF2', 'ATP5L', 'DUSP7', 'TMPRSS6', 'OR2T3', 'SLC4A4', 'ST13', 'TPPP3', 'ZNF718', 'C8ORF74', 'B3GALNT1', 'OSTF1', 'ABI1', 'ACOX3', 'CEP44', 'GPD1', 'ZNF517', 'CGRRF1', 'ATP1A1', 'DUSP5P1', 'SNORD67', 'TCF4', 'CT47A9', 'RUNX1', 'FAM171A2', 'HIST1H2AB', 'TMEM79', 'ROCK1', 'GTDC1', 'CD248', 'CENPO', 'NPR1', 'VPS72', 'DYNAP', 'COA7', 'TNFAIP2', 'ZBTB47', 'IKZF1', 'MRAS', 'FANCL', 'MRGPRF', 'TMX1', 'POMK', 'SNORD115-39', 'PRTG', 'OTOR', 'SEPHS1P1', 'KRT73', 'CSDE1', 'UBN1', 'TSPY2', 'EVI2B', 'ERAS', 'PMS2P5', 'SNORD82', 'RFXAP', 'BSN', 'ATXN1L', 'DDIT3', 'MUS81', 'GTF2H1', 'BNIP2', 'BTN1A1', 'COG6', 'LOXL1', 'LINC00696', 'C1ORF204', 'ATP1A1-AS1', 'ATHL1', 'LYRM4', 'ECE1', 'TUBB4B', 'PTTG1IP', 'LIN52', 'NUTM2A-AS1', 'ZWINT', 'AUNIP', 'SPRED1', 'METRNL', 'GPD1L', 'BMS1P20', 'GYS2', 'GSTA2', 'ZSWIM2', 'YBEY', 'SLAMF7', 'GDA', 'TRIAP1', 'TOMM22', 'MYH10', 'CWC25', 'SNORD113-9', 'ANAPC1', 'IL23A', 'MORN5', 'GAGE2D', 'OR4F21', 'TUBA1C', 'FAM133CP', 'CST1', 'ADCY10', 'AZIN2', 'OR6B3', 'RAB5B', 'OPALIN', 'HTR2A', 'DCTN5', 'C1QTNF4', 'HAMP', 'FIGNL1', 'WDR36', 'SLC2A10', 'FRMPD1', 'NHLRC1', 'IQCC', 'ATXN2L', 'SC5D', 'LANCL1', 'CELA2A', 'RPA4', 'LBH', 'CAPRIN1', 'UGT2B10', 'LDB1', 'EPHA7', 'ZMYM5', 'HNF1B', 'ISLR', 'ENTHD2', 'DPP7', 'C1ORF140', 'GTF3C2', 'TP73-AS1', 'FADD', 'ACSM3', 'OR2AE1', 'NT5DC2', 'TNFAIP3', 'DCLK1', 'SLX1B', 'TMEM161A', 'GALNT11', 'PSG7', 'ADAMTS19', 'MAK16', 'KLHDC1', 'FGF12', 'TREML3P', 'ACOT7', 'SPAG11A', 'TDRD3', 'ZNF398', 'KRTAP4-4', 'SP5', 'ZNF286A', 'SLC26A1', 'OR1S2', 'TAAR6', 'LILRA2', 'REM1', 'CDR2L', 'SERTM1', 'C11ORF49', 'TMEM223', 'FER', 'SNORD46', 'TCTA', 'NIPSNAP3A', 'PPIL1', 'HLA-DQB1', 'CD320', 'C14ORF37', 'CDKAL1', 'SHKBP1', 'LBHD1', 'DNM1L', 'LRRC74A', 'FAM110C', 'ALG9', 'SUGP2', 'CFAP52', 'INO80B', 'CHKB', 'SFT2D2', 'TEX2', 'DEFB113', 'ST6GALNAC1', 'BTBD1', 'FRY', 'OR52B6', 'EXOSC5', 'MSTN', 'ULBP2', 'PAF1', 'ANKRD30BL', 'HSP90AB1', 'PSG5', 'C14ORF177', 'MCPH1', 'COX7A2', 'C5ORF24', 'RPN2', 'THSD1', 'ZSCAN4', 'TUBA3E', 'NTRK1', 'KLHL12', 'RNF168', 'LECT2', 'DDX10', 'HTR1A', 'LOC100128573', 'ENPP5', 'TM9SF3', 'TAC4', 'CANX', 'PKIG', 'SRP68', 'CCBL1', 'VIM', 'C8ORF76', 'GBA3', 'TMEM39A', 'TMEM150C', 'INTS4', 'PADI3', 'TIMM17A', 'EEF1E1', 'BMP5', 'ACOT2', 'UBXN1', 'COASY', 'GAGE12F', 'CCT4', 'ACTG2', 'PPP3CB', 'KIAA1045', 'CLDN23', 'DLGAP2', 'LOC644936', 'ASB1', 'SH3BGRL3', 'SNORA70B', 'SLC22A5', 'C21ORF58', 'ZBTB1', 'PXYLP1', 'CDK8', 'MAGEA2', 'USPL1', 'CENPC', 'HIST1H2BF', 'ATP5O', 'RAX', 'CFAP44', 'PWAR5', 'TAF7', 'ANKRD31', 'SEMG2', 'ADAM15', 'LMNTD2', 'HIST1H3C', 'RNF41', 'ARL6IP4', 'HOXA5', 'CLEC16A', 'KIF18A', 'HBD', 'SAP30BP', 'FAM103A1', 'MRPL36', 'FAM8A1', 'ZNF236', 'NUDT7', 'CTXN2', 'PRAMEF10', 'PTK2B', 'CRYM-AS1', 'ATP11A', 'SNORD33', 'SLC25A24', 'STAM2', 'ZRANB2', 'SEBOX', 'HDHD2', 'COL7A1', 'TMED10', 'ZG16B', 'CELF1', 'PRSS38', 'GSAP', 'DDX26B', 'KRT8P41', 'LAP3', 'PTMA', 'BGN', 'APLNR', 'FOXH1', 'CLK1', 'INPP5F', 'NCS1', 'ZNF704', 'SETDB2', 'BHLHE40', 'SUPT4H1', 'C8A', 'SPDYA', 'WDR44', 'PMP22', 'GAS2L1', 'RAB8A', 'MTERF4', 'BTN3A3', 'ACSS3', 'BCRP3', 'PRELP', 'STUB1', 'C1ORF52', 'FAM26D', 'SLC9A7', 'SMAD1', 'CLEC3A', 'PFN1P2', 'KATNBL1', 'C9ORF91', 'GPR82', 'RASL11B', 'NUDT19', 'TMEM86B', 'CHD2', 'CYP2A6', 'WDR49', 'UBAC1', 'PSMB5', 'PAEP', 'MARCH11', 'MDK', 'CLEC1B', 'PRKCH', 'HYKK', 'PRDX5', 'TSC22D3', 'TMEM53', 'ZMYND8', 'INPP5B', 'ZNF512', 'NRSN1', 'ME2', 'PLP1', 'SKOR1', 'C4ORF32', 'TTC39C', 'SCARNA8', 'PCDHGA12', 'WFDC8', 'SF3B5', 'CDK12', 'MCM7', 'STAP2', 'PSMA5', 'ADPGK', 'BEST1', 'NUCB2', 'CUX2', 'POGK', 'GLT8D2', 'PHLDB1', 'LRRN4CL', 'SPAM1', 'SUSD1', 'TCTN2', 'C20ORF203', 'SPAG8', 'PTGFRN', 'NFS1', 'ALOXE3', 'LOC400043', 'GRAMD2', 'SYN1', 'HGC6.3', 'OR4C45', 'ZNF582', 'CHAC1', 'FAM169B', 'SNORD115-16', 'ARFGEF3', 'NAPA', 'THNSL1', 'L3MBTL3', 'PDRG1', 'FANCD2OS', 'ANKRD34A', 'RAET1G', 'PLAG1', 'RARB', 'FAM46C', 'KLF4', 'HSD17B1', 'ADIRF', 'KRTAP19-5', 'PDSS1', 'GLYCTK', 'ZNF771', 'RPL27A', 'NOP14-AS1', 'CHST2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.836180148993898e-15 NRMSE: 5.486266150173898e-16 MAPE: 4.954644167442671e-12 Pearson Correlation: 0.08364931039387462 Spearman Correlation: 0.18332148779909974 Coefficient of Determination: -1.67503868241333 RMSE: 1.2194226488989386 NRMSE: 0.1906688529276739 MAPE: 913.3000452927135 Predictor: ElasticNet Pearson Correlation: 0.40632588562021016 Spearman Correlation: 0.4020787805399903 Coefficient of Determination: 0.055722742228523026 RMSE: 0.5459049560626383 NRMSE: 0.10559907073325564 MAPE: 257.7496845503933 Pearson Correlation: 0.38683202478477147 Spearman Correlation: 0.3624758413446552 Coefficient of Determination: 0.03271388003754361 RMSE: 0.7332747015501859 NRMSE: 0.11465478876556734 MAPE: 551.6631879167849 Predictor: RandomForests Pearson Correlation: 0.6000406931170501 Spearman Correlation: 0.5580884683760174 Coefficient of Determination: 0.28226801821095293 RMSE: 0.47593585215733275 NRMSE: 0.09206434775559671 MAPE: 175.73316056882078 Pearson Correlation: 0.43265816305219407 Spearman Correlation: 0.4594446314791955 Coefficient of Determination: 0.15062080048241078 RMSE: 0.6871317788821023 NRMSE: 0.10743988411884955 MAPE: 197.78192248307195 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['CDCA7', 'PTGR2', 'CNNM1', 'GLRA3', 'KRTAP10-11', 'DIRC2', 'GPR17', 'OR4D6', 'FARSB', 'CEACAM6', 'SEPSECS', 'ANKRD36', 'NELL2', 'BAP1', 'COL6A4P1', 'OR6S1', 'HNRNPCL3', 'CELA3A', 'DEFB131', 'TRAPPC9', 'SULT4A1', 'SRBD1', 'GPR158-AS1', 'YY1AP1', 'UGT1A10', 'YPEL2', 'MAP4', 'LOR', 'NAB2', 'RAF1', 'ANKFN1', 'TBC1D3', 'PELO', 'ARHGEF18', 'KRTAP5-4', 'TMLHE', 'GRAMD1A', 'PIN1P1', 'MAD2L1', 'MARK2', 'MCUR1', 'PPBPP2', 'IRF7', 'PHAX', 'SLC8A2', 'ASH1L', 'MARCH1', 'SUV420H1', 'ZNF519', 'EHD1', 'CCDC124', 'BSPH1', 'ITGAV', 'SLC6A17', 'RRM1', 'ZNF134', 'MXRA8', 'NME8', 'HCG18', 'DDX21', 'DAB2', 'SCUBE2', 'CALCOCO2', 'C16ORF71', 'KIR3DL2', 'PPWD1', 'GNAT3', 'SLC25A32', 'FATE1', 'WNT11', 'MANSC1', 'CRHR2', 'NDUFS5', 'BCAS1', 'HSD17B4', 'SAFB2', 'CCDC91', 'PUM1', 'BRINP1', 'IFNLR1', 'CD8A', 'C12ORF76', 'DNHD1', 'KATNBL1', 'ZFYVE27', 'ZNF512', 'IL5RA', 'C3ORF14', 'ALPI', 'WNT5B', 'TAPBPL', 'SULT1A3', 'KIF26B', 'GK2', 'ZSCAN12', 'CYP2F1', 'STX10', 'ARPC1B', 'DGCR5', 'HERC1', 'GNA15', 'S100A1', 'HMGA2', 'GSS', 'ATF7IP2', 'SFXN2', 'SRSF7', 'SKIL', 'ZDHHC2', 'LMF2', 'OACYLP', 'NUPR1', 'MRPS2', 'DNAI2', 'NSMCE4A', 'CTSH', 'ADCY5', 'ABCB6', 'BACE1', 'C2ORF69', 'PEAK1', 'WNT4', 'ASB13', 'FASTKD5', 'ABCC10', 'ZNRF2', 'CISD1', 'SPRYD4', 'PRKAR2A', 'LDLRAP1', 'LAMTOR4', 'ITGA3', 'MIR4697HG', 'LRRC57', 'TMED7', 'NOTUM', 'TMEM102', 'FTHL17', 'PDZK1IP1', 'ADAP2', 'ST7-AS2', 'NXPE2', 'ANP32AP1', 'MTDH', 'HSPB1P1', 'NMUR1', 'ZNF678', 'TVP23C', 'METTL15', 'CREBBP', 'ACTRT1', 'YLPM1', 'IL23R', 'C14ORF28', 'DAPK2', 'BTC', 'FSCN1', 'LPPR5', 'FAM53A', 'CYLD', 'EIF2D', 'MAP1LC3C', 'ERLEC1', 'KIF1BP', 'KIF21B', 'MRPS11', 'DLEC1', 'GSTK1', 'LRRC75A-AS1', 'TACO1', 'RLTPR', 'MAGI2', 'RHEBL1', 'ITGB5', 'C8ORF74', 'ITPRIPL2', 'NOL4', 'MYO1H', 'AFAP1L1', 'UBR5', 'IDI2', 'FBXO4', 'AASDH', 'AADACP1', 'C1ORF146', 'MARCH11', 'LINC00240', 'MFAP4', 'FGD5', 'MMAB', 'GPR62', 'ITPRIP', 'BRS3', 'NELL1', 'PNPLA5', 'ZNF267', 'FAM192A', 'C9ORF171', 'HSPBAP1', 'TSN', 'TBC1D16', 'PCDHA10', 'LETM1', 'DPYS', 'XKR3', 'TTC21A', 'KRT33A', 'PLVAP', 'MYO9A', 'BAGE2', 'SNORD116-8', 'RBBP7', 'NTSR1', 'OR51M1', 'TCHP', 'IFNAR2', 'UBE2Q2P2', 'HIST2H3C', 'RPRD2', 'TBL1X', 'TAS2R3', 'ZNF792', 'HIST1H2AK', 'GNB5', 'SNORD116-11', 'PACSIN2', 'YWHAEP7', 'LINC00523', 'ANP32E', 'LL22NC03-63E9.3', 'SOD2', 'TOR1AIP2', 'LSM5', 'ZNF704', 'ATOH7', 'ZNF45', 'MST1R', 'NNAT', 'RNF34', 'SNORD35B', 'SNORD2', 'VPRBP', 'DDA1', 'PSORS1C2', 'CX3CL1', 'THUMPD3-AS1', 'OCM', 'SUPV3L1', 'IFNA5', 'CLPTM1', 'C3ORF35', 'LINC00654', 'PRDX2', 'ZNF836', 'GSTCD', 'SLC37A1', 'CEP250', 'HTR3E', 'CELA1', 'CCT2', 'DCT', 'FAM157A', 'UGT3A1', 'L2HGDH', 'SLC36A1', 'ACBD6', 'DNAJB5', 'KIAA1324L', 'PDE6G', 'DHODH', 'UPK1B', 'APOBEC4', 'MRPS14', 'CBR3', 'LOC256880', 'TMEM155', 'ATAD5', 'MTX2', 'RBM33', 'CTNNBIP1', 'POLR3F', 'SUSD3', 'PAGE5', 'CEP83-AS1', 'RHBDD3', 'PCSK2', 'ZDHHC12', 'FOXE1', 'PSMA4', 'LCOR', 'ZMYND11', 'CCDC37', 'GNAL', 'ERP29', 'OBFC1', 'NCAPG', 'SNORD114-29', 'TPH2', 'CAPN9', 'MEGF6', 'UNC5CL', 'CLPX', 'CXORF36', 'SLC6A11', 'GCA', 'CYTH2', 'ZNF540', 'SNHG7', 'HOOK2', 'GFER', 'RNF151', 'PGPEP1', 'CATSPERB', 'FAT1', 'CHRNA4', 'FBLL1', 'SRMS', 'POMT2', 'CARD16', 'DSN1', 'POU2F1', 'C12ORF45', 'SLC35D1', 'USP3', 'EIF5AL1', 'GINS1', 'POU6F1', 'ATP6V1G2', 'OSGIN1', 'KLHL34', 'COQ4', 'COBL', 'EEF1E1', 'SERPINB1', 'SOHLH2', 'EIF3D', 'ETFB', 'TM4SF4', 'ATP6V1C1', 'CSF2', 'TIPARP', 'PLAG1', 'SLX1B', 'MBLAC2', 'C11ORF74', 'KLK14', 'CYP2D7', 'GRHL1', 'SLC13A3', 'EPX', 'S100A7L2', 'MAGT1', 'ARHGAP21', 'RECQL', 'BNIP3', 'ZNF223', 'SNX12', 'FKRP', 'TCEANC', 'ZC4H2', 'ALG1L2', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.8302492524154615 Spearman Correlation: 0.8092018201709111 Coefficient of Determination: 0.6893129848899302 RMSE: 0.10690646434903182 NRMSE: 0.06887193709069533 MAPE: 195.21083300545718 Pearson Correlation: -0.06272595123448815 Spearman Correlation: 0.13697677028391878 Coefficient of Determination: -48.90678491340439 RMSE: 1.4701691023056171 NRMSE: 1.4283054690089645 MAPE: 624.9068485354211 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: RandomForests Pearson Correlation: 0.5466910075609521 Spearman Correlation: 0.4607244133492108 Coefficient of Determination: 0.1756330042336769 RMSE: 0.17414167335428035 NRMSE: 0.11218661514207141 MAPE: 141.17143359167125 Pearson Correlation: 0.21883273040799162 Spearman Correlation: 0.30197134627613814 Coefficient of Determination: 0.043116211815805605 RMSE: 0.2035715545926243 NRMSE: 0.1977747759106822 MAPE: 171.7373754487929 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['MMP12', 'ZHX3', 'CHP2', 'IRS1', 'FAM195A', 'UBXN2A', 'IL7R', 'ACOX2', 'PLAU', 'LRRC36', 'RBM22', 'IPO5', 'AGO2', 'KRT13', 'POLR3A', 'SGCD', 'MRPL17', 'SENP3', 'ZNF676', 'PRPS1L1', 'WDR49', 'SMC2', 'IQUB', 'CD1D', 'RPP38', 'SNORD115-4', 'SLC4A3', 'ECE2', 'APOA2', 'DDA1', 'CARD17', 'TMEM132C', 'PAGE5', 'TMEM201', 'MROH8', 'ZNF337', 'DST', 'TXNDC5', 'FGF2', 'FBXO48', 'WDR93', 'CAPZB', 'C11ORF95', 'ZNF503-AS2', 'CD40LG', 'MCM5', 'ASH2L', 'AFAP1-AS1', 'PEX11B', 'SCN3B', 'SH3BP1', 'LY86', 'RNF115', 'ZDHHC5', 'ARHGEF25', 'SYT16', 'STYXL1', 'OLFML3', 'KLHDC7A', 'NKX1-2', 'CHST7', 'NDUFS5', 'GTF2F1', 'HSFX2', 'ZFHX4', 'RAMP3', 'UBE2Z', 'USP32', 'RBCK1', 'PPP1R14C', 'PRAMEF4', 'LOC341056', 'KRTAP5-5', 'WSCD1', 'KRTAP6-3', 'NUP50', 'C2ORF78', 'CCDC74B', 'FAM215A', 'EBF1', 'CASC3', 'COL26A1', 'OR10W1', 'FAM41C', 'THNSL1', 'NUP107', 'REC114', 'GXYLT1', 'PRICKLE2', 'PIP4K2B', 'VSTM2B', 'DLEU2L', 'ASAH1', 'CEBPG', 'UQCRC1', 'TAF15', 'TMEM80', 'NPM1', 'ADTRP', 'BOLA3', 'CSMD1', 'TUBA4A', 'UPF2', 'KRTAP21-1', 'FMNL2', 'SNX21', 'TMEM87B', 'NANOS3', 'ASB6', 'HMGCS1', 'SAC3D1', 'C7ORF25', 'UIMC1', 'MFSD9', 'SPAG17', 'PPAP2B', 'PFKFB3', 'SNORD32B', 'SNORD111', 'FMO3', 'EDEM3', 'LRSAM1', 'PASD1', 'ACTRT2', 'IAH1', 'PRR18', 'ADAMTS16', 'CXCL11', 'ZNF620', 'GATA4', 'RIN1', 'OR51F2', 'CENPV', 'IPO7', 'NDUFB10', 'EFHD2', 'ZNF205', 'PATL1', 'EN1', 'PRR26', 'ZFHX3', 'FAM69C', 'KRTAP21-2', 'AGL', 'C19ORF48', 'ELMSAN1', 'PPP2R4', 'TNR', 'C8ORF48', 'HMP19', 'FAM9B', 'KRTAP10-7', 'DDX12P', 'CHST4', 'FAM162B', 'C1QTNF1', 'RNF135', 'GOLGA7', 'ZNF33A', 'GLMN', 'OR3A1', 'ODF2', 'FCGR1C', 'TMEM71', 'CPSF7', 'SCGB1C1', 'CA9', 'ITGA11', 'MLEC', 'BRD2', 'CREG1', 'ESAM', 'KCNMB2', 'S100G', 'CDCA8', 'MOB1A', 'SAMD12', 'LOC344967', 'VPS28', 'SPINT1', 'IFNA2', 'LRRTM3', 'MSRB1', 'OAZ3', 'SLC17A2', 'NANOS1', 'PRAMEF14', 'OTUD7A', 'TMEM44', 'ASCC1', 'RFX2', 'BRDTP1', 'STK33', 'KIAA0408', 'SPANXN1', 'SNHG9', 'RPL31P11', 'CWC27', 'AGO1', 'EFCAB12', 'RRAGC', 'PSG2', 'NKX2-4', 'ASAH2B', 'SRA1', 'CCDC53', 'GTPBP10', 'ATP5H', 'SNORD114-10', 'APH1B', 'CD48', 'TUFM', 'SNORD59B', 'SP100', 'SLC39A2', 'CD27-AS1', 'SLC37A3', 'CEACAM21', 'TMEM99', 'CEBPB', 'PCDHB17P', 'AQP7P1', 'DSEL', 'C14ORF1', 'RPS2P32', 'MROH6', 'GAPDHS', 'MYH9', 'GMPR', 'SIDT1', 'PLEKHF1', 'ZGLP1', 'FAM213A', 'ST6GAL1', 'NFKB2', 'ITPRIPL2', 'SNORD115-5', 'OR52E8', 'HNRNPUL2', 'PCNT', 'DEFB135', 'FAM71E1', 'TAF1', 'GMCL1', 'ASL', 'SERP1', 'TIGD2', 'MAGEC1', 'DEFB132', 'DCUN1D2', 'ARAF', 'OPN1SW', 'RANBP3', 'PDE1C', 'CCDC144B', 'PDS5A', 'PAM', 'PALLD', 'SRF', 'FANCM', 'CILP', 'CCDC59', 'EDRF1', 'CSN1S1', 'SLC1A3', 'WNT1', 'GJA5', 'HERC5', 'FCHO1', 'MTMR7', 'GOLGA8B', 'NXPE1', 'AMELX', 'CHIC1', 'LRRC4C', 'BHLHA15', 'LINC00634', 'DCAF13', 'HSPA13', 'PRRC2B', 'UBTD2', 'SYNGR1', 'VPS53', 'DPH2', 'KIAA1324L', 'PQLC3', 'SNORA53', 'FXYD5', 'TMEM175', 'TCTN2', 'RILP', 'SNX13', 'FAM206A', 'SRFBP1', 'WFIKKN1', 'SLC6A12', 'GNRH2', 'PLG', 'KRT35', 'RPS4Y1', 'TENM3', 'PGC', 'SNORA26', 'SERPINB12', 'MUC1', 'CCDC25', 'CALHM1', 'AASDH', 'DNAH6', 'ZP4', 'VGLL2', 'FGL2', 'SH3GL1', 'GLRX', 'ZNF221', 'SNORD115-37', 'NKD2', 'TULP4', 'OR4Q3', 'CRYGC', 'MME', 'PMS2P4', 'C9ORF85', 'OR2S2', 'TTTY13', 'CACNB2', 'SBF1', 'QTRT1', 'CD109', 'GABPA', 'CFHR3', 'SNORD90', 'QRICH1', 'TMEM180', 'SLC43A2', 'WHAMMP3', 'GATS', 'FAM134C', 'IL27RA', 'OR51V1', 'UBE3C', 'DARS', 'SCG2', 'ZNF20', 'RADIL', 'TMEM139', 'CDC20', 'PPIEL', 'SPIDR', 'DUSP3', 'RASSF1', 'TMEM260', 'COL9A3', 'SUMF1', 'REN', 'MOB3B', 'TBK1', 'MORN2', 'ARFIP2', 'OR51L1', 'CLDN17', 'ZC3H10', 'TCF15', 'USP39', 'SLC2A10', 'HSPA9', 'NMS', 'CADM2', 'CDR2', 'TMEM206', 'BCAS2', 'MYO3B', 'OR1B1', 'HIST1H1B', 'STAM2', 'ZNF320', 'WDYHV1', 'MEIOB', 'TMEM160', 'TANGO6', 'SERGEF', 'EPB41L4A-AS2', 'SLC45A4', 'ENTPD8', 'PP14571', 'CRLS1', 'EPS15', 'PABPC1L2A', 'SFRP2', 'TLR1', 'MIR1-1HG', 'TRAPPC8', 'MFI2', 'LMNA', 'PBX2', 'NXPE2', 'SUCNR1', 'PMS2P1', 'SPATA13', 'SETD6', 'FCGR3A', 'KCNN3', 'USP12', 'KRT36', 'OR2J2', 'RNF207', 'HIST1H3A', 'SEC61B', 'KLRAP1', 'MAPK11', 'LRRC24', 'RPGRIP1L', 'COL4A4', 'FRZB', 'INTU', 'TNNC2', 'LSM3', 'SMPD3', 'PDE7A', 'CRTAP', 'UTP3', 'NBPF7', 'SPECC1L', 'PROSER3', 'CASC10', 'DYX1C1', 'WIBG', 'ARL14', 'EIF2B2', 'ATXN7L2', 'PRDX5', 'MRM1', 'HSPA5', 'PDLIM2', 'SRR', 'RNF24', 'CIZ1', 'TRIML1', 'SCARNA8', 'DPF1', 'SF1', 'HERC1', 'MYEF2', 'GNL3L', 'SLC4A10', 'SNORD117', 'CSTB', 'JUND', 'FAM71D', 'C8ORF74', 'PM20D1', 'CCER1', 'RCN1', 'SIGLEC7', 'HAVCR1', 'PUS10', 'ERAP1', 'PCGF6', 'NKAIN1', 'HGD', 'PCBD2', 'KYNU', 'PPP1R18', 'MYF6', 'MBOAT7', 'PID1', 'NUTM1', 'PRMT2', 'ZNF137P', 'DNAJC1', 'BBS12', 'MYO15B', 'FLI1', 'ATP5E', 'CCDC90B', 'MAPK8IP2', 'SNORA79', 'GFM2', 'LINC00893', 'FAU', 'RHOU', 'CPLX3', 'PSMB4', 'SCG3', 'YIPF1', 'CLK2P1', 'COX20', 'GLI2', 'MS4A4A', 'HAS1', 'SCG5', 'ZMYM2', 'VDAC2', 'ZNF222', 'IL17RB', 'NUCB2', 'GOLGA8EP', 'INO80E', 'GRAMD1A', 'EPB41L4A-AS1', 'SULT6B1', 'SGK3', 'FTLP10', 'DHX33', 'SNORD113-7', 'TTC30B', 'CUX2', 'SYCE1L', 'RGS8', 'MAGEF1', 'ZUFSP', 'RPL39', 'KDSR', 'SLC4A5', 'PRKCG', 'C2ORF83', 'FGFR4', 'HES6', 'PIGZ', 'NASP', 'TRIM49', 'CCDC63', 'IFIH1', 'EIF5', 'TMEM254', 'PLA2G2E', 'LINC00598', 'SLC22A16', 'EPM2AIP1', 'SPARC', 'SNORD115-26', 'LAMB2P1', 'HAVCR2', 'CYSTM1', 'PHB2', 'RHBDD3', 'TTF2', 'MAP3K11', 'ZEB2', 'OR9G4', 'SLC36A2', 'IGFN1', 'DNPH1', 'LRIG1', 'THAP11', 'AEN', 'HIF1A', 'TRA2A', 'MYO1G', 'ZIC4', 'EXOSC8', 'ZSCAN20', 'ATG4B', 'OR52I1', 'RAB9B', 'CEP164', 'C12ORF71', 'ACTR1B', 'SLC20A1', 'NUGGC', 'MUC20', 'SNORD119', 'SNORD116-25', 'HTR1D', 'ELOVL2', 'SORBS1', 'RUSC2', 'TMEM116', 'LILRA4', 'RHOJ', 'TARM1', 'RASD2', 'BOD1', 'TOMM40L', 'CXCR2', 'HELQ', 'CXORF36', 'WEE1', 'SNORA4', 'TMEM25', 'PSMD1', 'DNMBP', 'PCDH7', 'SUSD1', 'TYR', 'B3GALNT2', 'HEPHL1', 'GCNT2', 'LOXL4', 'SH3BP5', 'TTTY20', 'FARP2', 'UBL4B', 'HECW2', 'MPPE1', 'HHATL', 'FES', 'LMAN1', 'TOM1L2', 'GAPT', 'STAG3L3', 'BNIPL', 'GDI1', 'NWD1', 'INHBE', 'DRG2', 'WDR63', 'MIA3', 'MON1B', 'CDH23', 'CD1C', 'KCNAB1', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 4.404601283950148e-15 NRMSE: 9.957276554651628e-16 MAPE: 3.1870064163885923e-12 Pearson Correlation: 0.059196800700703996 Spearman Correlation: 0.04558909712091174 Coefficient of Determination: -7.4810693753918205 RMSE: 1.8366702188312933 NRMSE: 0.5533806022390158 MAPE: 806.3567248019913 Predictor: ElasticNet Pearson Correlation: 0.5008933917081961 Spearman Correlation: 0.37820968926658655 Coefficient of Determination: 0.14440261771333263 RMSE: 0.6233983307917652 NRMSE: 0.14092875116802647 MAPE: 212.37947758868373 Pearson Correlation: 0.4853474040551039 Spearman Correlation: 0.2661504507537501 Coefficient of Determination: 0.1263961075755602 RMSE: 0.5894719667658664 NRMSE: 0.17760529278875156 MAPE: 145.60341064373702 Predictor: RandomForests Pearson Correlation: 0.6781033057716838 Spearman Correlation: 0.607588238727901 Coefficient of Determination: 0.45119197409686607 RMSE: 0.4992765153618826 NRMSE: 0.11286911164505087 MAPE: 202.51878141787665 Pearson Correlation: 0.5945822490289079 Spearman Correlation: 0.49496871503319256 Coefficient of Determination: 0.33468003617116315 RMSE: 0.514423919203117 NRMSE: 0.15499364844926697 MAPE: 129.0316663500276 Protein: TP53 x_train_column_count: 1002 x_train columns: ['MARVELD2', 'OR56B1', 'OR2A7', 'OR1L1', 'MMEL1', 'ABCD3', 'SNX2', 'GRXCR1', 'GABRA6', 'TDRP', 'TRAF2', 'MOV10', 'LOC654342', 'ACAP1', 'IARS', 'AFP', 'FBLIM1', 'LCE2A', 'PRKG1', 'PAIP2B', 'C8B', 'SGK494', 'MRPL19', 'TMTC1', 'MC4R', 'RQCD1', 'PREX2', 'FGF12', 'FRMD6', 'EIF2S2', 'LINC01139', 'DNM2', 'IL13', 'RUVBL1', 'WDR74', 'GLE1', 'HMOX2', 'ANP32E', 'CYLC2', 'RNY4', 'DDX41', 'LRTM2', 'CSAG3', 'STRN3', 'C1ORF146', 'TMEM182', 'SLC40A1', 'TGDS', 'AURKB', 'KLHDC8A', 'TARBP2', 'MLLT4-AS1', 'SLU7', 'SYNGAP1', 'KISS1', 'ITGB2', 'C21ORF2', 'ATP9A', 'CYP26C1', 'TYK2', 'ZNF286B', 'ITFG3', 'TBX3', 'TMEM217', 'CGB', 'CNNM3', 'PTPRT', 'ARGFXP2', 'AGAP7P', 'RPL39', 'SLC27A3', 'LAMP1', 'EFCAB13', 'MXRA7', 'SAP30L', 'C7ORF31', 'SPANXC', 'C20ORF85', 'PDGFRL', 'OR2J3', 'FITM1', 'MBD3L1', 'KLHL22', 'JAK2', 'LRP5L', 'DUSP9', 'PAH', 'NPR3', 'SFMBT1', 'POU4F3', 'THSD7A', 'IL13RA1', 'TRAPPC9', 'LAMA3', 'MAPK12', 'FAM183CP', 'AKAP9', 'SPATA31A5', 'OR4F29', 'TCEB1', 'CDK11A', 'NLRP7', 'RETSAT', 'CCDC120', 'CCDC157', 'LINC00930', 'NKX2-2', 'TBC1D31', 'DOC2B', 'UTP11L', 'C17ORF74', 'ZACN', 'GTF3C3', 'WWP2', 'COMMD3', 'IRF2BP2', 'TATDN2', 'IQSEC3', 'NFKBIB', 'MCTS1', 'CREBBP', 'MASTL', 'NCF1', 'NOC3L', 'GPR108', 'TBC1D3B', 'ZNF580', 'LOC154449', 'IFT88', 'ZNF295-AS1', 'ARFGEF3', 'HELZ', 'C3ORF58', 'DEGS1', 'UBE2Q2', 'GNAO1', 'LINC01101', 'SNORA1', 'ARFGAP1', 'COMMD7', 'PIP4K2B', 'TSSC4', 'SF3A2', 'UXT', 'NXN', 'HEXB', 'GPR158-AS1', 'SART1', 'ZNF837', 'TRPV2', 'TADA3', 'KANK4', 'SEC24B', 'ANAPC16', 'LGI1', 'B4GALNT1', 'FAM58A', 'LPCAT2', 'CRACR2A', 'LOC642929', 'UQCRFS1', 'RIC3', 'PUS3', 'MPP2', 'BUB1B', 'C8ORF59', 'DEFB107A', 'SMTNL1', 'KCNAB2', 'NT5DC3', 'PPWD1', 'CHRNA4', 'MRPS22', 'ERICH6', 'KIF9', 'YBX1', 'SPATA3', 'HSD11B2', 'CD6', 'DRC1', 'CBX3', 'DUSP26', 'MRGPRX2', 'TMEM252', 'ATXN2', 'TEX9', 'HSPA1B', 'CRYBB1', 'VPRBP', 'WNT9A', 'MRPL3', 'ATP7B', 'GYPA', 'ARAP1', 'KRT84', 'MMP23A', 'CSNK1E', 'SNORD1C', 'MED8', 'TOP1P2', 'TRERF1', 'RCE1', 'RPL23AP64', 'TRMT10B', 'ZNF117', 'C10ORF99', 'VAV3', 'DKKL1', 'POLB', 'TMED10P1', 'SLC36A1', 'TRIQK', 'ROPN1L', 'RLN2', 'CASP9', 'DNAJB9', 'ADAM18', 'SHISA4', 'CFL1', 'PDE8B', 'GPR180', 'UBR1', 'THRA', 'IL12B', 'ZNF607', 'CLP1', 'IL1F10', 'CPN1', 'NANOS2', 'BTBD6', 'CUL2', 'SESN2', 'GJA5', 'RPP25', 'LAMB1', 'UGT2B4', 'SNORA61', 'MRPL42P5', 'KSR1', 'CLDN25', 'PRSS38', 'MMP2', 'RBM24', 'ITFG1', 'CYP1B1', 'MS4A7', 'CHURC1', 'PVRIG', 'RUNX1T1', 'KRTCAP2', 'SIKE1', 'HSPA2', 'TF', 'C16ORF62', 'PLAGL1', 'SARS', 'PPP1R35', 'MDS2', 'CCDC62', 'FAM156A', 'CCS', 'SLC5A11', 'RIN1', 'CYTH4', 'SNORD123', 'C7ORF61', 'CEL', 'LINC00115', 'KRTAP10-8', 'TOX', 'DENND2D', 'SLC4A1AP', 'ITPK1-AS1', 'C14ORF132', 'KCNMB4', 'UNK', 'SH3GL1', 'PHACTR3', 'HSD3B1', 'ANGEL1', 'SP5', 'PRR26', 'DCHS2', 'DSC2', 'ANKFN1', 'MC5R', 'ZNF133', 'EIF6', 'DCAF4', 'HIATL2', 'LSP1', 'COL23A1', 'MOAP1', 'P4HTM', 'ARHGAP10', 'CHAT', 'NAA11', 'FKBP8', 'PRSS50', 'P2RY4', 'ARL3', 'MAGEA6', 'EXOC3L1', 'OVGP1', 'TMEM47', 'TROVE2', 'HS6ST3', 'WDR20', 'CASQ1', 'PIGV', 'WFDC1', 'PNKD', 'SASH1', 'C20ORF27', 'FAM228B', 'LINC00469', 'MED25', 'DIDO1', 'MAPK6', 'CST11', 'HEBP1', 'MAD2L2', 'GLTSCR1L', 'GIF', 'ASH1L-AS1', 'DPRXP4', 'NUP188', 'PDXK', 'DDX3X', 'LINC01184', 'TTF2', 'SLC15A4', 'CXCL6', 'CROCCP3', 'RBM15', 'APCDD1', 'NOL4L', 'IGFN1', 'HNRNPA1L2', 'RASSF9', 'RNF7', 'CALCOCO2', 'OR12D3', 'MRPL57', 'SLC25A44', 'FOXL1', 'CD1B', 'MAN1B1-AS1', 'HIST1H2BJ', 'SURF2', 'NUP37', 'C17ORF67', 'IDUA', 'PRSS57', 'ZNF526', 'A4GALT', 'SPAG4', 'NHLRC4', 'FN1', 'PMS2P4', 'SLC33A1', 'SEC11C', 'NBPF1', 'PPIG', 'TRNP1', 'MYO18B', 'PNCK', 'S100A12', 'NOS2', 'DHRS7', 'VPS13D', 'PELI2', 'SPP1', 'IL17RE', 'ANKRD20A20P', 'NPB', 'DSG1', 'PEX2', 'LPAR4', 'SPEN', 'ROR1', 'NBPF3', 'CCDC83', 'ZNHIT1', 'CCDC12', 'LINC01420', 'GTF2B', 'RFC1', 'FLJ37201', 'DNAH10', 'GATS', 'C2ORF15', 'TRHDE', 'C5ORF49', 'CLDN23', 'SCUBE3', 'SHKBP1', 'NOC2L', 'DUSP10', 'RBP2', 'IVL', 'KLHL42', 'PRUNE', 'ZDHHC5', 'TDRD7', 'PLEKHD1', 'YOD1', 'PAFAH1B2', 'C9ORF170', 'FAM127C', 'TIE1', 'PRKAR1B', 'DALRD3', 'CYB5D2', 'NRG2', 'PRKD3', 'HERC2P2', 'NALCN', 'MRGBP', 'BTC', 'CHML', 'FLT1', 'CEACAM21', 'ZNF556', 'STRN', 'TTL', 'SLC51B', 'GPR88', 'HGFAC', 'DNAJB3', 'BEND2', 'ALCAM', 'KIF20A', 'CD4', 'PPFIBP2', 'LCN8', 'BLCAP', 'PQLC3', 'CLSTN2', 'ADAM11', 'COL24A1', 'RPL37', 'OR52E6', 'C2CD4A', 'PRKCD', 'CCDC112', 'OR51B4', 'CBX6', 'HAND2-AS1', 'PARD3B', 'ZNF497', 'PDIA3P1', 'TNFRSF10C', 'HINT2', 'SNORD6', 'PKD1L1', 'C5ORF38', 'ZWINT', 'MRAP', 'BMP1', 'PTH2', 'ACTR3C', 'C14ORF177', 'KCNC2', 'PP12613', 'NIT1', 'EPB41L5', 'YBX2', 'SNORD26', 'CLK4', 'ZFAT-AS1', 'SLC36A4', 'POU6F2', 'FAAH2', 'GPR161', 'GRAMD3', 'HIST1H2AM', 'ITPKC', 'RIMS1', 'CEP63', 'DKFZP779M0652', 'DNAJC30', 'CHST2', 'NDUFA3', 'HNRNPU', 'FUT10', 'RHOG', 'TWF2', 'ZFPM2', 'KIAA1586', 'CENPBD1', 'FXYD7', 'CACTIN', 'CD3EAP', 'MPO', 'NECAB1', 'DCT', 'GABARAPL3', 'PRDM14', 'STMN1', 'OR52W1', 'FMNL2', 'LYSMD3', 'TCOF1', 'PARVG', 'CX3CR1', 'LRRK1', 'PPP6C', 'ILDR1', 'LOC100132111', 'ZNF34', 'CCDC51', 'FAM174A', 'ZCCHC16', 'CDRT15', 'FAM19A1', 'LSM8', 'ZNF106', 'FBXO33', 'SULF1', 'IL22', 'ZNF655', 'TMSB4XP8', 'LOC728024', 'BOP1', 'SMARCD2', 'RAB6C', 'GFPT1', 'HDGFL1', 'ADPRHL1', 'POMC', 'JDP2', 'FNIP1', 'SRP14', 'OR2T11', 'CANX', 'CGB7', 'INSM2', 'TNNI1', 'TISP43', 'NOA1', 'FCGR3A', 'HAPLN2', 'VWA2', 'PRB4', 'FAM109B', 'RPL26', 'ATP6V1A', 'ACTR3BP2', 'RAB40AL', 'ATP1B1', 'ANKEF1', 'NANOG', 'PDLIM2', 'ATP5C1', 'TAB2', 'MYO1G', 'KALRN', 'NOG', 'CD276', 'SNORD81', 'ALX4', 'KIF21A', 'TJP3', 'ATP2B4', 'UNC45B', 'DNMBP', 'HMGXB3', 'SYNPO', 'OR52A5', 'IGF2R', 'LINC00452', 'SELL', 'CTDP1', 'RAC1', 'NAA15', 'MED1', 'CCDC82', 'TBL1XR1', 'TMEM229B', 'HMGB3P1', 'MYCNOS', 'WDR36', 'NAV1', 'TBRG4', 'SPATA18', 'PRPF19', 'OCEL1', 'ESM1', 'PRH2', 'LOC729609', 'PBOV1', 'ANXA11', 'MAFG-AS1', 'SNORD24', 'C17ORF47', 'CSF3R', 'KDM3A', 'FREM1', 'RPRD1B', 'RGS10', 'SMURF1', 'RANBP3L', 'OSGEPL1', 'MSGN1', 'LIMK1', 'CYP39A1', 'CCDC124', 'TNK2', 'CACNB2', 'HIST1H3G', 'ADRA1D', 'SSX4', 'SLC4A4', 'BCL2L10', 'TMEM41A', 'ZEB1', 'MDM4', 'MSN', 'ADGRG1', 'ART3', 'MORN1', 'GOLGA8B', 'FAM184B', 'IQCF5', 'SERPINA11', 'OR3A3', 'MRPS23', 'SCARNA1', 'TIMP4', 'AP3D1', 'FZD7', 'CACNG5', 'HLA-DRB1', 'BOK', 'GGT5', 'AOC2', 'CAPN9', 'EIF2S3', 'NABP2', 'SYNE2', 'SPRTN', 'IFNA8', 'SLC35A5', 'OR2T33', 'ELOVL2', 'GYG1', 'FLJ13224', 'PSTPIP1', 'GOLGA2P5', 'FBXL8', 'DSE', 'IRF2', 'ZFP69', 'FSTL1', 'SNAR-G2', 'CSTL1', 'ZNF224', 'SCAF1', 'RNF157', 'CNNM2', 'ESPN', 'ZNF584', 'LOC644669', 'OLMALINC', 'DOCK6', 'CNBD2', 'GUF1', 'KRT33B', 'ALDOB', 'OR2M4', 'PRG3', 'OR5K2', 'NDUFAF4', 'MRPL33', 'PEX7', 'NIPSNAP3B', 'FZD9', 'P2RX1', 'APMAP', 'PEX11B', 'C17ORF89', 'ALPL', 'FOXJ2', 'AFAP1L2', 'CNOT3', 'TEX28', 'APPL2', 'NXT1', 'VTRNA1-3', 'CXADR', 'ADGRB2', 'DHRS2', 'DNER', 'TMEM257', 'KCNG4', 'POU3F3', 'TSPYL5', 'SIGLEC9', 'SNORA8', 'KIAA1328', 'LINC01134', 'DACT3', 'SON', 'ZMAT1', 'TRAM2', 'ZNF418', 'PHLDA2', 'DTX1', 'SKA3', 'MSRB1', 'UNC119', 'TAF7', 'LCLAT1', 'NFKBIZ', 'SLC22A4', 'NUP210L', 'ZNF195', 'LCORL', 'LRRC75B', 'RBP7', 'CYP46A1', 'C19ORF45', 'SCARB1', 'SFMBT2', 'MTR', 'CD44', 'ZNF484', 'HLF', 'DCBLD1', 'CDCA7L', 'CD68', 'PON3', 'NDNF', 'TRIM29', 'USP29', 'TNFAIP2', 'C14ORF105', 'SEPT7P2', 'KIF1A', 'LINC00113', 'TDH', 'PLA2G16', 'PSORS1C1', 'CROT', 'SPATA6', 'IFT122', 'LINC00883', 'JSRP1', 'GDF5', 'SHISA9', 'SYCP3', 'IDE', 'DEFB109P1B', 'HES7', 'SMIM10L2A', 'ANKRD46', 'MEX3A', 'SDC1', 'WIPF2', 'MAGEA4', 'TBX20', 'SPINK14', 'ECSIT', 'EHD1', 'TRIP6', 'LINC00202-1', 'LPAR6', 'IRGQ', 'AKAP8', 'KIF4A', 'ABHD8', 'MIEF2', 'CLDN3', 'GNG12', 'ZNF337', 'PCDH7', 'NUCB2', 'LINC00893', 'SCN10A', 'CTSC', 'NAA25', 'SEMA4C', 'GSTM2P1', 'RBP1', 'KCTD12', 'PDCD6IP', 'PSMG3-AS1', 'HEATR3', 'PRICKLE1', 'STYXL1', 'ATP5A1', 'RPS3A', 'HDAC2', 'ATP6V1G2', 'ATP1B4', 'ZNF146', 'SNAI1', 'TBX2', 'DTD2', 'INO80', 'KHDC3L', 'NLRC4', 'ARPP19', 'DHFRL1', 'NYAP1', 'UXS1', 'LRRC31', 'XKR3', 'SAXO2', 'SNORD88B', 'CRYBA1', 'ZBTB42', 'LYAR', 'CYSTM1', 'KRTCAP3', 'CYHR1', 'LINC00482', 'TATDN1', 'FUT1', 'TVP23B', 'RGS12', 'R3HDM4', 'CGNL1', 'RMST', 'RPLP0', 'RFNG', 'DOCK8', 'ITPR2', 'DUOX1', 'LINC00905', 'TRPV5', 'TEKT5', 'ENO3', 'SERPINC1', 'HCFC1R1', 'SIGLEC10', 'PHF1', 'PCM1', 'CCDC66', 'CDK3', 'PP7080', 'ZNF749', 'TNS3', 'LRRN3', 'TBC1D13', 'MED12L', 'XAGE3', 'IGF2-AS', 'GYS1', 'HYKK', 'RPP25L', 'RPIA', 'METTL13', 'MED13', 'PLSCR1', 'RCAN1', 'TNFRSF12A', 'GPR32', 'SLC35G1', 'FAM188B', 'TSPAN18', 'CRYAB', 'MCAT', 'PTPRA', 'FAM20B', 'MSRB3', 'LRP4', 'FOXN3', 'TYMP', 'PLA2G10', 'ZNF330', 'TNFRSF6B', 'ZNF223', 'CSHL1', 'SHC1', 'SMOC2', 'RALA', 'RBL2', 'ST7-OT4', 'PROX1', 'MUCL1', 'FAM134B', 'SLC35G6', 'LARP1B', 'ATP2B1', 'ARNTL', 'CXCR1', 'ZNF321P', 'HK3', 'F7', 'UBE2NL', 'ZNF230', 'NHLH1', 'SOX3', 'OGFOD2', 'ATG7', 'SLC45A2', 'KRT18P55', 'KRT35', 'H2BFM', 'BMP3', 'GYPC', 'PTPN6', 'CDK20', 'AFF3', 'LINC00471', 'GJD4', 'SNORD116-3', 'INHBA', 'CNFN', 'SPATA31D5P', 'SLC7A9', 'ARID4A', 'FSHB', 'ARSD', 'BGN', 'AP1G2', 'CBWD6', 'PDLIM1', 'ZNF473', 'PYGL', 'TMEM41B', 'DKK3', 'ZNF213', 'ZNF69', 'BNIP2', 'KDM8', 'PGM5', 'ACIN1', 'CSNK1G3', 'PTBP2', 'TRIM24', 'FABP5', 'PDCL3', 'ATIC', 'RPL23AP53', 'CYBRD1', 'RPS11', 'PSMA3', 'P2RY10', 'EML6', 'ZSWIM5', 'METTL6', 'PROCA1', 'WDFY1', 'DFNB31', 'FCHSD2', 'C12ORF50', 'RPSA', 'SNORA75', 'C17ORF98', 'WDR41', 'RORC', 'ATP8B1', 'HSPBP1', 'STRIP1', 'ZNF566', 'OR4N3P', 'TMTC3', 'FAM76A', 'OGDH', 'ZNF92', 'COG1', 'CYP2R1', 'SAMHD1', 'RPLP1', 'LRRTM1', 'TTC37', 'PIGN', 'OR8B12', 'WIPI1', 'CNKSR1', 'SRXN1', 'LIN7B', 'ACOT12', 'MCUR1', 'MAGEB16', 'KIAA1551', 'IL1B', 'CELSR2', 'ZNF470', 'CPPED1', 'HDC', 'DNAJC24', 'TMEM178A', 'SEC16A', 'MSL3P1', 'APBB1', 'F2R', 'LOC441601', 'MRPL34', 'NUTM2F', 'MOSPD2', 'ZNF512B', 'TNFSF11', 'RPS6KA6', 'NMUR1', 'GLO1', 'GMNN', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.7717918148406996e-15 NRMSE: 4.2580913598670985e-16 MAPE: 5.401360350619252e-12 Pearson Correlation: 0.2749352783351277 Spearman Correlation: 0.22397037369543263 Coefficient of Determination: -1.2344657734829587 RMSE: 0.6454786986494291 NRMSE: 0.2048358398862113 MAPE: 822.3941315176031 Predictor: ElasticNet Pearson Correlation: 0.45459541947713805 Spearman Correlation: 0.493931958056267 Coefficient of Determination: 0.16191456219305245 RMSE: 0.4120706180007882 NRMSE: 0.09903163133880996 MAPE: 629.369740953355 Pearson Correlation: 0.4325011045585547 Spearman Correlation: 0.38481028441751153 Coefficient of Determination: 0.1520596582290068 RMSE: 0.3976286880862141 NRMSE: 0.12618325973794556 MAPE: 193.73015472197585 Predictor: RandomForests Pearson Correlation: 0.6728827096302201 Spearman Correlation: 0.5873065476594703 Coefficient of Determination: 0.36837781360074007 RMSE: 0.3577306815976565 NRMSE: 0.08597228589225102 MAPE: 675.950884268542 Pearson Correlation: 0.5483661632983822 Spearman Correlation: 0.4469257721417973 Coefficient of Determination: 0.25238189873924144 RMSE: 0.3733661704774792 NRMSE: 0.11848380632060142 MAPE: 173.59930464076965 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['RCCD1', 'LOC100129534', 'SEMA6A', 'PLA2G4E', 'SLC12A8', 'HEATR3', 'EAF2', 'PPBPP1', 'DEFB115', 'HHAT', 'ESAM', 'TNFRSF6B', 'TMEM106B', 'TNNT3', 'DNAJB6', 'TCN2', 'AGRN', 'MITF', 'PUSL1', 'RFX5', 'USP46', 'TRAPPC1', 'HTR1B', 'SNORD116-23', 'EDARADD', 'ZHX1', 'MICAL3', 'DNAJC17', 'CEACAM8', 'ATRN', 'KCNE5', 'KLHL18', 'MRPL45', 'GAL', 'TCP1', 'ZKSCAN8', 'FOXP1', 'CTBP1-AS2', 'OR10H5', 'MSMO1', 'CD53', 'PAN3', 'KLK1', 'FLT3LG', 'TEX36', 'AOC3', 'SSX5', 'ASTL', 'TRHDE', 'TAS2R40', 'CFC1B', 'ANKRD13B', 'PRAMEF17', 'LPAR5', 'PLEKHG1', 'PPP2R1B', 'MCM10', 'DRG2', 'LVRN', 'CDC26', 'INO80B', 'HBBP1', 'AJAP1', 'SELP', 'SNORD63', 'ARHGAP6', 'LTBP2', 'OR51E1', 'HOOK1', 'SCN5A', 'OR2C1', 'SIPA1L1', 'CLEC14A', 'FOXB2', 'ITPK1-AS1', 'LINC00896', 'MSRA', 'SLC44A3', 'MTHFD2', 'LRRTM2', 'SNORD98', 'SMARCE1', 'SSH2', 'ITGA3', 'SNRNP25', 'RPS18', 'CDV3', 'C19ORF71', 'CHD5', 'IL1A', 'RUNX1T1', 'CIB2', 'SEPT2', 'HCRTR1', 'SNTG2', 'RSPH9', 'DCAF8L2', 'WDR31', 'UGT2A3', 'OR10T2', 'ANKRD54', 'PAGE4', 'TOMM5', 'CPXM2', 'LINC00282', 'ZKSCAN4', 'SCAF8', 'CLCA3P', 'PQLC3', 'ZNF281', 'EXO1', 'NUTM1', 'PCDHA6', 'MYL12B', 'RAB21', 'CCDC173', 'DLG5', 'CDC14A', 'DET1', 'MAP4K5', 'IGFL2', 'RCHY1', 'OR5AN1', 'ATAD1', 'TCEB3B', 'DAPK1', 'PLEKHG3', 'RC3H1', 'GPR18', 'SNX19', 'ZBTB3', 'NUDCD1', 'SMNDC1', 'LYRM4', 'RNF186', 'TMEFF2', 'ANLN', 'CDHR2', 'FAM3D', 'OR3A3', 'USP3', 'C2CD2L', 'GID8', 'RBM26', 'TMEM101', 'C10ORF131', 'SNORA6', 'RXFP4', 'KLF10', 'KLLN', 'TMCO3', 'DMRT2', 'OR56A5', 'SOX3', 'BLOC1S2', 'FAM189B', 'TRIML1', 'ITCH', 'SDHD', 'GRAPL', 'TRPC2', 'PAK7', 'LBP', 'BTD', 'CCNI2', 'CREBRF', 'C8A', 'ACOT6', 'PGBD5', 'IGIP', 'LYN', 'POM121L12', 'RNF146', 'SMTNL2', 'FAM229B', 'DAP3', 'HSPH1', 'FKBP10', 'ECE2', 'HS6ST1', 'GNAT1', 'THAP8', 'CELF6', 'AP3S1', 'CDH9', 'C2CD4B', 'KRTAP5-4', 'LINC00200', 'PPM1N', 'LINC01018', 'TMEM59', 'NMNAT3', 'NFKBIA', 'MSX2P1', 'C22ORF46', 'NOTCH2', 'TMOD1', 'PAF1', 'SNORA40', 'RSPRY1', 'ADGRF2', 'ENOX2', 'POP5', 'MMS19', 'POLM', 'BAMBI', 'TGFB3', 'TMEM56', 'ZYG11B', 'BTBD6', 'DBNDD1', 'CEP41', 'KANK4', 'TUBB', 'COMMD3', 'GYG1', 'LRR1', 'CX3CR1', 'ZNF132', 'CORO7', 'CTSD', 'EYA1', 'KLHL26', 'SUN5', 'TTC41P', 'ZNF232', 'TKT', 'ZMIZ1', 'SMIM10', 'FAM173A', 'ATP5G1', 'SURF4', 'RPL8', 'RRAGB', 'PLET1', 'AMDHD1', 'SIDT1', 'AHSA1', 'STRBP', 'LACTB2', 'JOSD1', 'PPP1R3F', 'YIF1B', 'NR3C1', 'SATB2', 'PFDN4', 'CLUH', 'ZNF682', 'LIN54', 'ACTR3C', 'SIRPB1', 'FOXR2', 'FAM53C', 'FZD7', 'NTSR1', 'SCOC', 'CRMP1', 'PLK2', 'HNRNPCL3', 'TMSB15A', 'KALRN', 'IGSF11', 'ASIP', 'CCDC141', 'BLOC1S4', 'P2RY11', 'C10ORF111', 'OR7E24', 'UQCRB', 'ZNF837', 'CCDC64', 'LRRC18', 'MSS51', 'LCN9', 'PF4V1', 'BRD7P3', 'OTOS', 'SPAG16', 'KLHL15', 'DHRS11', 'CELA3B', 'LAX1', 'SEC14L3', 'LTF', 'PFDN5', 'KRTAP20-1', 'SLC28A2', 'SNORD115-26', 'LENG8', 'ATP5G2', 'MCEE', 'LOC100270746', 'CDK10', 'LRRC39', 'OR2A14', 'CPSF1', 'CNTN6', 'NLRP2', 'PEX12', 'TCTEX1D4', 'IFNA1', 'INTS12', 'LILRA4', 'LINGO4', 'LCORL', 'RPL28', 'KIAA1549L', 'GJB3', 'SIRPD', 'PPP2R2D', 'ZNF480', 'TRIM46', 'EIF1', 'OR4K14', 'ZNF497', 'DUSP3', 'SLC36A4', 'ANKRD12', 'CPSF6', 'AKAP7', 'KNG1', 'SPOCK3', 'CCBE1', 'HTATSF1', 'ELAVL3', 'GPR174', 'CAMK1G', 'KCTD21', 'QSOX1', 'PADI1', 'KRT38', 'TMEM55B', 'SLC7A2', 'HMX3', 'RBM4B', 'APCDD1', 'ERMARD', 'CDK19', 'VCX', 'SLC16A13', 'TAS2R14', 'SPINK9', 'INTS4P1', 'ANXA11', 'LINGO3', 'HMP19', 'ARL13A', 'RBM6', 'DGCR8', 'OBFC1', 'CTGF', 'CCL17', 'DIP2A', 'KPNA7', 'PDYN', 'ZNF280D', 'ADGRA3', 'RALGPS1', 'AKT1', 'NWD2', 'ABCA4', 'HGF', 'TP53AIP1', 'SEPT8', 'LINC00319', 'ERAP2', 'ABCA9', 'C11ORF45', 'PPP1R1A', 'SNCB', 'CSDC2', 'ROPN1', 'PROM1', 'CRYGB', 'AQP4-AS1', 'FCGR1A', 'DKFZP434L187', 'TSNAX-DISC1', 'PKIG', 'DAXX', 'MYO5C', 'PITPNB', 'HIST1H2BK', 'OR9A2', 'KCNH8', 'R3HDM1', 'BMS1P20', 'KIF1B', 'ZNF37A', 'SETD6', 'C14ORF169', 'KRTAP6-3', 'PRDX6', 'GUK1', 'ATP6V1A', 'FOLR2', 'SNAR-A2', 'WIZ', 'SNW1', 'DRICH1', 'MPLKIP', 'PAPSS2', 'CMC2', 'PLXND1', 'LGALS7B', 'SNORA45A', 'C17ORF67', 'FAM214B', 'IP6K3', 'NDUFAF5', 'MKRN3', 'BBS12', 'UNC93A', 'PKHD1L1', 'LRRC66', 'LOC283922', 'GAGE12J', 'FLJ37201', 'LOC654342', 'STAB1', 'ARL16', 'VPREB1', 'ZBTB42', 'SNORD114-6', 'PRNP', 'HSD3B7', 'TOB2P1', 'AKR7A3', 'MAMSTR', 'RANBP1', 'FCRL3', 'CNTD2', 'SLFN11', 'CAPG', 'MLF2', 'CD207', 'SYP', 'ATRX', 'MTMR2', 'SLC52A1', 'DCDC2', 'EXD1', 'COX18', 'INSL3', 'RNF13', 'CENPM', 'GSTT2', 'ASCL3', 'KCTD4', 'LINC00894', 'ANXA2P2', 'TNFRSF11B', 'TCERG1', 'NOTUM', 'BCL10', 'NUPR1L', 'USH1C', 'HSFX2', 'SLC44A5', 'CCDC28B', 'TOR1A', 'SRRM4', 'PPM1L', 'ATP6V1C1', 'FBXL16', 'C12ORF42', 'DCST1', 'ZNF225', 'C14ORF132', 'FAM122C', 'GPR37', 'GCNT1', 'SPRY2', 'GOLGA6L6', 'ANAPC13', 'UBE2V2', 'SOCS7', 'FAM160B2', 'SPIN4', 'OR2V2', 'NRXN1', 'SLC25A18', 'POLG', 'MYOF', 'ADGRA2', 'RD3', 'HAND2', 'NOL10', 'CLEC11A', 'CERS6', 'TYMSOS', 'MRGPRE', 'AIPL1', 'PCBD1', 'SH3RF3', 'AMICA1', 'ISX', 'OTOA', 'CHRNA7', 'ATP6V1B2', 'CYP2B6', 'C10ORF25', 'LYST', 'SSX9', 'TMEM79', 'WDR78', 'MDP1', 'ZNF473', 'SLC2A4RG', 'RPPH1', 'TRIQK', 'NRG2', 'GIMAP4', 'TRAF6', 'EPS15', 'XDH', 'TBXA2R', 'ATP10A', 'P2RY4', 'SLC22A24', 'KRTAP9-2', 'S1PR4', 'C6ORF141', 'LINC00895', 'HDAC10', 'ZBTB10', 'WARS2', 'PIWIL4', 'SECISBP2', 'MED9', 'C11ORF95', 'TBL3', 'G6PC2', 'HOXB5', 'FIP1L1', 'KRT12', 'BID', 'PTH', 'C11ORF84', 'PRDM13', 'SH2D3C', 'SGPP1', 'RBBP8', 'MCM2', 'BCL7B', 'PDGFRA', 'CENPP', 'SNORD91A', 'ZFHX3', 'ADAM10', 'IFI27', 'AARSD1', 'TNFRSF14', 'TBC1D3B', 'GJC1', 'MEOX1', 'PITPNM1', 'FAM89B', 'NYAP1', 'CDH23', 'SLC39A2', 'SREK1', 'BPIFA2', 'NUBPL', 'KMT2E-AS1', 'FAM120C', 'RAPGEF5', 'DMTN', 'WDPCP', 'SNORA70B', 'NRIP2', 'LYZL2', 'MXD4', 'CYFIP2', 'C8ORF46', 'SSR1', 'MYO5B', 'ZNF175', 'C14ORF79', 'OR10S1', 'LDLRAD4', 'TBC1D13', 'ZNF142', 'EVC2', 'SLC6A15', 'ARGLU1', 'CMTM6', 'GNA11', 'DENND1A', 'KRT83', 'BTN2A3P', 'PPWD1', 'RNF112', 'SYNM', 'RGR', 'EMC3', 'CCDC74A', 'HEPN1', 'EGOT', 'FLJ33360', 'TCEAL6', 'ANGPTL2', 'BCS1L', 'PPP6R2', 'VPS28', 'B3GNT8', 'LDLRAD2', 'ZNF177', 'KRT81', 'CACNA1C', 'DHX15', 'UTP20', 'GTPBP3', 'IQCC', 'DNAJC19', 'ZNF768', 'IGFBP7', 'DIS3L2', 'GAGE2D', 'ABRA', 'GPR141', 'CACNB3', 'COQ10A', 'MNDA', 'FBLN5', 'ALOX15', 'RHBDD3', 'ALOX12', 'ZNF585A', 'NUGGC', 'GRIN3B', 'GPR157', 'MT1X', 'TNC', 'ANP32A-IT1', 'XYLB', 'CTXN2', 'MMP23A', 'TMEM256', 'AHCTF1', 'LGMN', 'STBD1', 'RPS4Y1', 'RAB8B', 'RDH12', 'XIRP2', 'DDX5', 'SARS2', 'NPAS4', 'HIST1H4C', 'FAR2', 'ZNF436', 'HNRNPK', 'KANSL1', 'SLC24A2', 'PLEKHO2', 'PRSS53', 'MRAP2', 'SPPL2A', 'OR2A4', 'CHRNE', 'HENMT1', 'SENP3', 'ZDHHC23', 'HPS3', 'SPSB1', 'UBN2', 'HLA-DRB1', 'GPRIN3', 'TMEM134', 'GNG13', 'CD63', 'GARS', 'SDPR', 'KLRK1', 'GOLGA6L1', 'ZNF335', 'SPON1', 'SIRPG', 'SNORD114-31', 'SPOCK2', 'KCNH7', 'SENP6', 'CPO', 'PTDSS1', 'RHPN2', 'LYG1', 'MRGPRX1', 'GORASP1', 'CEACAM3', 'ZNF331', 'NKIRAS2', 'TADA1', 'NT5DC3', 'SDR42E1', 'GNRHR2', 'PLEC', 'ATP2B4', 'HAR1A', 'UBE2J1', 'LINC00883', 'PTER', 'UTP6', 'AOAH', 'RNF180', 'PARP8', 'BRIP1', 'ATP13A1', 'DCX', 'GRIK1-AS1', 'GSTTP1', 'C1ORF122', 'DNAJC3', 'FOXA1', 'PCID2', 'SARAF', 'PUS1', 'ZNRF3', 'ADAM7', 'CCL13', 'PLK4', 'NGRN', 'SLC2A3', 'RAD21L1', 'ZCCHC14', 'CT47A2', 'CYP2B7P', 'FRG1B', 'NXPH1', 'STX16', 'FTL', 'ZNF311', 'ARRDC2', 'FBP2', 'POU3F1', 'TUSC7', 'CRSP8P', 'BIRC6', 'KIAA1522', 'RABL2A', 'TFIP11', 'SPI1', 'VASH1', 'PFDN6', 'JUN', 'SNORD48', 'TLDC2', 'ARHGAP44', 'SLC5A12', 'PLA2G3', 'SKA3', 'KIAA1024', 'DCD', 'SIPA1L3', 'CASP8AP2', 'LOC148696', 'CEP68', 'ASPH', 'PHOX2B', 'BASP1', 'CHCHD5', 'CHIT1', 'GNS', 'GUCA1A', 'PSME2', 'CHD4', 'ST3GAL5', 'CDK2', 'SUPT5H', 'LAMTOR3', 'CEP44', 'FAM47E', 'HINFP', 'SNORA7B', 'LOC100130691', 'SAMD5', 'NDUFS5', 'PDE4C', 'C14ORF177', 'TCEAL2', 'ATL2', 'IFNW1', 'SNORD114-9', 'NFATC4', 'LOXL2', 'BMPR1A', 'TMA7', 'KCNMB2', 'DUS4L', 'LINC00174', 'TCTN3', 'TAS2R46', 'FGF8', 'LRRC56', 'SYT15', 'SNAI2', 'KATNA1', 'LOC113230', 'CCDC106', 'LINC00899', 'METTL1', 'PIK3R3', 'PRAMEF9', 'KIAA1324', 'ZNF428', 'NXF2', 'SLC38A8', 'RDH16', 'CRTAM', 'SNORD115-22', 'BRD3', 'MED30', 'MED1', 'DNAAF1', 'NUDT16P1', 'FAM170A', 'CACNA1S', 'LTB', 'POU5F1B', 'OSBP2', 'PRR12', 'GTSF1', 'PCBP4', 'FGG', 'C19ORF53', 'ERICH3', 'TEAD3', 'C16ORF58', 'POLR2A', 'HYAL3', 'PPP1R32', 'C1QTNF4', 'PDCL2', 'MT2A', 'CYP4F11', 'SMCHD1', 'MAGEA1', 'GOLGA2P10', 'OSM', 'HSP90B1', 'RHOU', 'ZNF687', 'TMEM205', 'PCDH8', 'OLAH', 'TMEM2', 'TMED6', 'PEX11B', 'PRUNE2', 'ASIC5', 'CTU1', 'SRSF11', 'ENTPD5', 'CWC15', 'MAEL', 'OTULIN', 'RAB5C', 'PPP2R5B', 'HCFC1R1', 'EIF5A', 'ACOX3', 'LBX1', 'ZSCAN20', 'SRD5A2', 'ST3GAL3', 'MYOD1', 'NADK', 'CEP128', 'C10ORF53', 'GPHB5', 'CENPF', 'PER3', 'VHL', 'KIF13B', 'KCNIP4', 'CUEDC2', 'SMCO4', 'WRN', 'WDR47', 'TUBB1', 'GNAL', 'CTTNBP2', 'SPATA33', 'TAX1BP1', 'PRORSD1P', 'SSNA1', 'TBL1Y', 'RABEP2', 'COPE', 'ASF1A', 'CTDP1', 'NLE1', 'VPS52', 'LRRC17', 'NHEG1', 'FRMD4B', 'BLNK', 'PRKG1', 'C1ORF194', 'WDR27', 'MOB3B', 'KIR2DL4', 'RPL38', 'NEK2', 'RGS3', 'C1ORF186', 'HCRTR2', 'FGFRL1', 'FBXW7', 'JUNB', 'LHX2', 'HMGN1', 'F10', 'PKD1', 'PRR27', 'CCM2', 'ARHGAP42', 'DSCAML1', 'RBM28', 'ENAH', 'SCLT1', 'CD55', 'RGS16', 'CHST6', 'RSPH3', 'SNORD4A', 'COX19', 'NXPH4', 'UBLCP1', 'SEC22C', 'NPAS2', 'ZDHHC16', 'MAGEE1', 'CST9L', 'PRAME', 'ZNF804A', 'ZNF236', 'SMS', 'PDF', 'SMYD4', 'NTN4', 'IL13RA2', 'CLEC19A', 'FOXN3', 'TENM2', 'FOXM1', 'FBXL19-AS1', 'SENP2', 'SRPX2', 'TMEM87A', 'CLIC2', 'PDCD1LG2', 'SPRR4', 'DMWD', 'PRB3', 'EIF4ENIF1', 'RNF7', 'ZNF678', 'PLA2G10', 'TACR2', 'C3ORF30', 'TIE1', 'CCDC80', 'LCE3D', 'LOC151174', 'CD3EAP', 'NR1H3', 'TPCN2', 'HPRT1', 'CFHR5', 'ZNF57', 'MEGF6', 'SCARNA16', 'SLC50A1', 'CCDC27', 'ZNF544', 'KCND1', 'KCNK2', 'SLC30A9', 'PRELID2', 'HOTAIR', 'ATP5G3', 'DUSP4', 'TM9SF1', 'KRTAP10-5', 'NAGLU', 'C9ORF41', 'MYL2', 'SNORD114-20', 'KRT80', 'KLF4', 'TCAM1P', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 2.8874673468680136e-15 NRMSE: 6.973885003545584e-16 MAPE: 2.235042788341478e-12 Pearson Correlation: 0.10617458303829022 Spearman Correlation: 0.09136522899288022 Coefficient of Determination: -1.5084847621817903 RMSE: 1.2709428529061253 NRMSE: 0.2672068902754447 MAPE: 1073.7401451122403 Predictor: ElasticNet Pearson Correlation: 0.48728982041039753 Spearman Correlation: 0.46940527513027036 Coefficient of Determination: 0.1360316682076932 RMSE: 0.6612705056706139 NRMSE: 0.1597117441963612 MAPE: 662.7102372033751 Pearson Correlation: 0.35578248638540794 Spearman Correlation: 0.31570717839374557 Coefficient of Determination: -0.03244821665443576 RMSE: 0.8153694376499457 NRMSE: 0.17142575007357366 MAPE: 779.7409685501393 Predictor: RandomForests Pearson Correlation: 0.60814867604505 Spearman Correlation: 0.5853710618700555 Coefficient of Determination: 0.2872319763192914 RMSE: 0.6006262993773901 NRMSE: 0.1450648003519926 MAPE: 554.9617986839266 Pearson Correlation: 0.3438523080356167 Spearman Correlation: 0.3040611478946122 Coefficient of Determination: 0.01972749445012767 RMSE: 0.7944996322475191 NRMSE: 0.1670380187216212 MAPE: 654.9579710903018 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['TRMU', 'TULP4', 'MRPS35', 'IPPK', 'ARHGEF9', 'TRIM63', 'CBR3', 'EIF2S2', 'TSPY3', 'NF1', 'GPR34', 'HCAR3', 'DOCK5', 'FAM118B', 'SOX17', 'DZIP1L', 'TBPL2', 'OAS3', 'PFDN1', 'FBXO44', 'NUDT12', 'HEXIM2', 'KLHL6', 'ISCA1P1', 'TNR', 'CNNM2', 'PALB2', 'KMO', 'TLR7', 'SNAR-D', 'ZBTB45', 'GOSR1', 'CES1P1', 'RNF138P1', 'NR2C2AP', 'CHL1', 'C17ORF49', 'ASL', 'PSAT1', 'GALNT4', 'OC90', 'SNORD114-18', 'RBBP7', 'CD22', 'OR2AE1', 'METAP2', 'KRT73', 'ARMCX2', 'RPL11', 'UBE2QL1', 'SLC6A18', 'FGD3', 'TMED5', 'HNRNPH1', 'ROCK2', 'HGH1', 'ZNF843', 'LINC00282', 'NCAM2', 'B4GALT2', 'GULP1', 'CRLF2', 'FXYD4', 'CCR10', 'ZNF521', 'CD8A', 'TOPBP1', 'SIX5', 'CAV1', 'DEFB105A', 'MOGAT2', 'OR10S1', 'LYPD8', 'RAB42', 'SMCO4', 'INTS4', 'TMEM249', 'KMT2E-AS1', 'SOX18', 'LUC7L3', 'SUPT5H', 'STAT5A', 'GLIS3', 'OR13G1', 'PLA2G4C', 'SOX3', 'FOXQ1', 'KCTD20', 'EMCN', 'ERBB4', 'DRAM2', 'MYOM1', 'SMG1', 'DCUN1D4', 'UBTD1', 'ROR2', 'UCP3', 'RNF144A', 'FGF4', 'CIDEB', 'CKLF', 'INO80C', 'CSGALNACT1', 'ODF3B', 'TSN', 'CALML4', 'SSMEM1', 'MRPS23', 'PRKAB2', 'DOCK2', 'CAPN5', 'MTMR9LP', 'IFT27', 'CNTN1', 'NISCH', 'IGSF21', 'MROH2B', 'RBP7', 'C1ORF95', 'OOEP', 'PAX8', 'CLDND1', 'SLC39A8', 'SLC35F4', 'SNORD51', 'DCUN1D5', 'NUP35', 'USP11', 'LMLN', 'PDILT', 'HRASLS5', 'PARP12', 'NXPE1', 'RPLP1', 'GUSBP2', 'NUDCD3', 'SLC35A5', 'SPR', 'RNASEH2C', 'SH3GL2', 'DGCR9', 'DMTF1', 'PRR15', 'ARHGAP36', 'UGT3A1', 'SBSPON', 'TCF19', 'SNRPA', 'OR7G2', 'FDPS', 'RGCC', 'KLF14', 'BACH2', 'SLC4A10', 'KRTAP22-1', 'PCBP1', 'VTI1B', 'DCAF6', 'STK3', 'PTPRR', 'CDH20', 'ABLIM3', 'OR4D2', 'S100A7', 'ACTRT3', 'WHAMMP3', 'TRIM52', 'AGT', 'EME1', 'LINC01548', 'TPTE2P3', 'ZNF599', 'LYPLAL1', 'BNC1', 'MIEF1', 'SWAP70', 'WNK3', 'RRBP1', 'ATP10A', 'GOT1', 'PEX3', 'VAT1L', 'NDUFAF7', 'ATP13A3', 'ABCA8', 'SURF4', 'LLGL1', 'POLL', 'PDIA2', 'TTLL3', 'MXRA7', 'OR2A2', 'AQP7P3', 'OSER1', 'TOB2P1', 'MT3', 'PEX7', 'SLFN11', 'DZANK1', 'CBX3', 'CD6', 'TMEM108', 'EFNA5', 'RNF123', 'TOLLIP', 'EIF3A', 'KMT2E', 'PCDHB4', 'PRKAR2A', 'POLR3D', 'ADGRG1', 'KLRD1', 'KRT9', 'ZCCHC9', 'MCMBP', 'NPFF', 'HSF2', 'HMGA1', 'CRB1', 'SIPA1L2', 'OR52N2', 'CAV3', 'ARMC10', 'PAXIP1-AS1', 'SLC2A7', 'BEND7', 'RPL7A', 'SLC22A2', 'NPIPB5', 'MRPS28', 'CNTRL', 'ZBED9', 'BCL2L10', 'SPTBN1', 'DNAJB7', 'TMEM205', 'RPL36', 'PPOX', 'SYT2', 'ZNF321P', 'KGFLP2', 'AMPD2', 'CMTR2', 'RHOU', 'TSPAN10', 'SNORA49', 'FSHB', 'HILS1', 'ASAP1-IT1', 'RUFY3', 'ATP6V0A4', 'CLPSL2', 'SOAT1', 'PLIN1', 'YWHAB', 'GUCY1A3', 'IFIT2', 'UCKL1', 'GAGE12F', 'CHN2', 'GAL3ST1', 'EDF1', 'TAC1', 'CPNE2', 'HINT2', 'SNORA71D', 'CIC', 'RAD1', 'FKRP', 'STEAP2', 'VAPA', 'ATP6V1F', 'PRR18', 'DAB2', 'MROH8', 'TSC22D3', 'CATSPER3', 'CNBD1', 'DNASE1L1', 'C6ORF201', 'QRICH1', 'PCDHGA5', 'IFT122', 'PPP2R4', 'TAF7', 'AP3D1', 'LAIR2', 'THEMIS', 'DCST1', 'DNMT3A', 'CNTNAP3', 'PRL', 'LDLRAD1', 'ARHGAP19', 'JAKMIP1', 'PRSS50', 'HAGH', 'ARPC1B', 'RPP25L', 'HEPACAM', 'RUNDC3A', 'EDN2', 'METRN', 'GSAP', 'CEP135', 'CPT1A', 'BCO2', 'CD48', 'CDK19', 'LRRC47', 'CDC14B', 'CAMKK1', 'RPSAP58', 'ZNF346', 'HECTD4', 'TMEM161A', 'RABAC1', 'LOX', 'ASB9', 'LGALS1', 'PPP1R9A', 'FAM127C', 'ZNF354B', 'TGFBR2', 'MAPK8IP1', 'DBX2', 'TIMELESS', 'BCL2A1', 'COPB1', 'LOC284661', 'SPRR2A', 'KRTAP27-1', 'BRWD3', 'ZNF436-AS1', 'MBOAT1', 'RBSN', 'APCS', 'OR10A5', 'ANKDD1A', 'CDKN2D', 'PRR27', 'OGG1', 'PRAMEF1', 'CLCA3P', 'KIDINS220', 'PRKD1', 'TTC30B', 'LOC400940', 'CCNG2', 'BPIFB6', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.9588949206727514 Spearman Correlation: 0.863366899791006 Coefficient of Determination: 0.9194794688304913 RMSE: 0.14324398711232145 NRMSE: 0.03456910179605702 MAPE: 28.00361031300882 Pearson Correlation: 0.2697334325025768 Spearman Correlation: 0.32111871719098745 Coefficient of Determination: -2.458066760269394 RMSE: 0.8407051398450364 NRMSE: 0.3430609401146807 MAPE: 308.0206476149451 Predictor: ElasticNet Pearson Correlation: 0.678134555364446 Spearman Correlation: 0.5932820180054327 Coefficient of Determination: 0.2324587492726491 RMSE: 0.4422562183407432 NRMSE: 0.10672978698765431 MAPE: 86.90848415206689 Pearson Correlation: 0.6228066375034126 Spearman Correlation: 0.4973403658399731 Coefficient of Determination: 0.21622445661553769 RMSE: 0.4002421933184274 NRMSE: 0.16332416278398248 MAPE: 117.35985777763294 Predictor: RandomForests Pearson Correlation: 0.8569416758834841 Spearman Correlation: 0.716275994028315 Coefficient of Determination: 0.7293012170646727 RMSE: 0.2626432458045595 NRMSE: 0.06338375022433079 MAPE: 55.17381160960636 Pearson Correlation: 0.842360633973387 Spearman Correlation: 0.7085663612722716 Coefficient of Determination: 0.7010935049755074 RMSE: 0.24716939350856926 NRMSE: 0.10086076614240157 MAPE: 71.11894130935372 Protein: CCND1 x_train_column_count: 859 x_train columns: ['ZNF385D', 'CASS4', 'ARL5C', 'MBD1', 'CCK', 'ZDHHC16', 'GMIP', 'LINC00961', 'BLMH', 'AKAP12', 'WRAP53', 'RIBC1', 'MROH5', 'TMEM232', 'MEF2B', 'EFTUD2', 'TFAP2C', 'SHANK1', 'MAP2', 'C3ORF52', 'PAXBP1', 'AGAP2-AS1', 'MYPOP', 'TBRG4', 'FLOT2', 'LCE6A', 'EIF6', 'DNAJB4', 'KRT17P5', 'ZNF77', 'SCLT1', 'SLC35F5', 'NEIL2', 'FAM58BP', 'RANBP1', 'GRIK1-AS1', 'IGSF9', 'ZBTB8B', 'RPL23', 'MAPRE2', 'MICALCL', 'DIO3OS', 'RFX4', 'SLIT3', 'AFMID', 'ZFAND3', 'DIDO1', 'RAB11A', 'PIWIL3', 'TECTA', 'SLBP', 'MTUS1', 'POPDC2', 'LINC00889', 'FBN3', 'ENTPD8', 'SHISA9', 'DCTN6', 'ARHGAP42', 'UBXN10', 'RAB41', 'GINS2', 'ZMPSTE24', 'TNFRSF13B', 'NDRG4', 'SCARNA14', 'C21ORF62', 'RAB40AL', 'OR52K1', 'GUCY2EP', 'DRP2', 'NOXO1', 'MYH10', 'MORN1', 'MAPK15', 'LRRC2', 'AKAP2', 'CACNA2D4', 'NAGA', 'SMG1P3', 'CMTM6', 'HLA-J', 'XK', 'GUCY2C', 'NBN', 'PSMD11', 'ZMYM5', 'SLC35E2', 'SAYSD1', 'PLGLA', 'CLEC4D', 'PGA4', 'KREMEN1', 'COMP', 'HINFP', 'LY75', 'CPA1', 'ZNF546', 'FAM83D', 'AOX2P', 'LINC01558', 'SPATA31D4', 'EGFLAM', 'SNORD113-7', 'ZCCHC17', 'TPPP', 'SLC25A37', 'DDHD1', 'CDK5RAP2', 'MTRF1L', 'AGO3', 'JAK1', 'COX7B2', 'CLCN1', 'DEPDC4', 'LRRC25', 'TTLL6', 'NUMA1', 'MS4A10', 'AKAP8', 'CDK16', 'SEMG2', 'CCDC142', 'JADE1', 'SGCZ', 'ZRANB3', 'GPATCH1', 'CDS2', 'ST20', 'PLSCR2', 'STYX', 'ASIC5', 'C16ORF74', 'OR2V2', 'FAM169A', 'KRTAP10-2', 'XPA', 'MGST2', 'SLC22A24', 'SSPO', 'ZNF705D', 'ZEB1', 'ZNF429', 'CLCA2', 'OR2S2', 'SNX4', 'ZNF469', 'CSTA', 'NLRP14', 'NRBP1', 'TM4SF4', 'RIPPLY1', 'AP1G1', 'DCP2', 'SPINK5', 'PNLIPRP3', 'CLEC3A', 'UQCRBP1', 'STRADB', 'KLHL4', 'PRPF40B', 'DEFB106A', 'FBXO11', 'ERCC3', 'KCTD3', 'OR2L2', 'SYT17', 'DDTL', 'CR2', 'XKRY', 'FLRT3', 'CIDEA', 'NRSN1', 'TNK2', 'JCHAIN', 'SEPHS2', 'ZNF625', 'TMIGD1', 'GRASP', 'CLMP', 'DCUN1D2', 'SYNJ2BP', 'BTBD11', 'SH3D19', 'OR6C2', 'GTPBP10', 'POLM', 'RNF208', 'TOMM7', 'GJD3', 'DIRC2', 'HIVEP1', 'C1ORF109', 'BARHL2', 'ZNF296', 'FBXO34', 'B4GALT3', 'APMAP', 'NXF3', 'ZNF117', 'KIAA0355', 'MEPCE', 'IFNA10', 'SRP9', 'ASTN1', 'LRRC45', 'DUSP23', 'FAM105A', 'RNF2', 'EEF1DP3', 'UQCRB', 'RBL2', 'EIF3A', 'PRKCQ', 'FXR2', 'LBX1', 'SNORD70', 'COX4I2', 'KIAA0040', 'KIF3B', 'RPS16', 'SLC5A6', 'FAM9C', 'IRAK1BP1', 'OR4C46', 'DKKL1', 'IL20RA', 'IFIT1', 'FSCB', 'INPP5A', 'C1ORF159', 'SLC35F3', 'TPT1', 'CLN6', 'GREM1', 'AQP7', 'DENND4B', 'EIF2S3', 'HEYL', 'DDX18', 'HNRNPA3', 'CXCL8', 'GNA14', 'PREX1', 'KATNBL1', 'VWA3A', 'KRBA2', 'RAB11B', 'LINC00552', 'TUG1', 'EPHA1', 'MED27', 'VARS', 'BAHCC1', 'H1FX-AS1', 'ZIC2', 'PDE6H', 'CABP5', 'SUCNR1', 'NUP98', 'GCSAM', 'ZNF833P', 'IGFL1', 'KBTBD8', 'KDM4B', 'ITPA', 'TBC1D3', 'FGG', 'SNORD26', 'OR10H2', 'WDR83', 'RFC1', 'RAD50', 'ALMS1', 'XKRY2', 'UBE4B', 'CNST', 'TTC19', 'NUBPL', 'LOC284009', 'STH', 'ANP32E', 'SFXN5', 'PRKAR2B', 'FSTL1', 'TSTD2', 'MSRB3', 'CCDC174', 'SLC16A13', 'ANXA8L1', 'NOX3', 'ARHGEF7', 'FBXO10', 'UG0898H09', 'LOH12CR1', 'HIF3A', 'CYP4F11', 'FAM214B', 'CAMKV', 'C1ORF158', 'USP15', 'NIP7', 'HIST3H2BB', 'CES4A', 'SORBS1', 'ASB12', 'TMEM104', 'NET1', 'SRGAP1', 'ATP2A2', 'SV2C', 'WBSCR22', 'IFNL3', 'KCMF1', 'FAM151B', 'IFNA14', 'MCTS2P', 'TAB3', 'EPCAM', 'COQ10B', 'MSMO1', 'RBMS3', 'ANKRD13A', 'FSHB', 'CREBBP', 'XIRP2', 'SOD1', 'RHBDD2', 'NHSL1', 'C22ORF46', 'MYOF', 'PTRHD1', 'KLF9', 'DNAJC13', 'RGN', 'COL4A6', 'FAM86JP', 'SPRTN', 'C17ORF85', 'PRDM10', 'FTH1', 'FAM225A', 'DDHD2', 'CX3CR1', 'JMJD6', 'SERF1A', 'MELK', 'NEDD8', 'PCNP', 'FLJ37201', 'KCTD5', 'PTPRU', 'WDR72', 'RPLP0', 'C16ORF90', 'SLC35F1', 'APOL5', 'SNORD116-15', 'RAD23A', 'XKRX', 'MYOM2', 'OR9K2', 'MYOM1', 'GLIS3', 'KCTD1', 'RASSF3', 'ARHGAP1', 'RNF39', 'FUT9', 'PTP4A1', 'CDK1', 'IGF2R', 'SNORD78', 'ZDHHC14', 'PICK1', 'FAM71E2', 'SLC44A3', 'CNTF', 'RAD51AP2', 'PADI6', 'SNORD114-19', 'KRT25', 'PKD1', 'NDUFB8', 'DCTN2', 'CCDC144CP', 'MED26', 'TOMM22', 'TCL1A', 'POLR1D', 'GGCX', 'CDH24', 'DNAJC21', 'ADGRF4', 'ZAR1L', 'EHF', 'DUSP15', 'HP', 'TMEM52B', 'RTEL1', 'TICRR', 'MAPK8', 'ECM2', 'SH3BP5L', 'HEBP2', 'NFATC3', 'CDC27', 'LOC647859', 'PCDH11Y', 'LRRC73', 'SEMA7A', 'LINC01096', 'RSU1', 'C1ORF54', 'FAM217A', 'ARFGAP1', 'SCIMP', 'MAZ', 'HNRNPH1', 'CHAC1', 'PCK1', 'TECRL', 'SLC22A16', 'ZP4', 'TTC39A', 'MDH1B', 'SND1-IT1', 'KCNV1', 'ZDHHC15', 'NDUFB5', 'KLHL38', 'DHX33', 'GPT2', 'RNASEK', 'NDUFAF2', 'SPRR2C', 'PLD2', 'FLCN', 'PIP5K1C', 'GPR180', 'SLC45A3', 'CIAPIN1', 'GTF3C5', 'SNRNP200', 'CYP11A1', 'CCDC102A', 'RNASE2', 'KHDC3L', 'SMIM3', 'FAM83F', 'KRT81', 'NFAM1', 'USP28', 'SIAH3', 'EXOC3L1', 'PCDH20', 'SRPK1', 'PEX2', 'ZIC4', 'SLC30A5', 'RAD18', 'ARPC5L', 'ERCC8', 'GHRLOS', 'ETV1', 'WDR43', 'CETN1', 'PAFAH1B3', 'KIF17', 'MTOR', 'CXCR4', 'PCDH11X', 'MRPS23', 'PM20D2', 'SLC4A1AP', 'CIZ1', 'SYAP1', 'KCP', 'GPR39', 'FAM181A-AS1', 'CD1B', 'ARG2', 'CTPS2', 'SPEF2', 'DHDH', 'TMEM74', 'TACC1', 'ITCH', 'CRYM-AS1', 'OR5K2', 'ATP5D', 'PLEKHG3', 'PI4KB', 'FBXO6', 'CUTC', 'MRFAP1', 'RAB4A', 'CKMT1B', 'SNORA30', 'ATP6V1F', 'IFIT3', 'HNRNPU', 'LSM7', 'TTYH3', 'UBE2V2', 'CHKA', 'DAPK3', 'DLG2', 'NAA35', 'MYH9', 'CEACAM7', 'MBD5', 'NAV2', 'DUS3L', 'MBL1P', 'C1QTNF1', 'LOC389033', 'SPAG1', 'CDH3', 'MPV17L2', 'EXOSC4', 'RIPPLY3', 'RASAL3', 'MCM3AP', 'WDR93', 'ARHGAP27', 'LINC00852', 'OPRL1', 'CCT4', 'WDR7', 'ZNF17', 'FAM74A3', 'ZFP30', 'POLI', 'FGL2', 'SLC7A1', 'LSG1', 'GPHA2', 'EGFL7', 'HPS5', 'HDAC9', 'MAT2A', 'SH2B1', 'ZNF394', 'FREM2', 'PLA2G6', 'PCDHB10', 'TTTY6B', 'THBS3', 'HSPB2', 'RELL1', 'FAM175A', 'SLTM', 'CCDC173', 'C10ORF88', 'PSKH2', 'DERL1', 'SASH1', 'DYDC1', 'CT47A9', 'PTBP1', 'IRS1', 'ARHGAP12', 'PRKCG', 'SPATA31D5P', 'CCDC117', 'BBS9', 'THOC5', 'SAMD4B', 'ZNF284', 'SNORD58A', 'INTU', 'KIF20B', 'TOP3A', 'SLC12A3', 'RBM24', 'ADH7', 'PNPLA4', 'CYP24A1', 'BTG3', 'KIF6', 'KATNAL2', 'PKIG', 'NTHL1', 'TRIM62', 'C8ORF59', 'SUCO', 'C10ORF82', 'C3ORF62', 'UMODL1', 'TAF1A', 'ZNF222', 'DTNBP1', 'GRAMD2', 'EFCAB7', 'MS4A7', 'MTDH', 'PDZD4', 'DNAJB3', 'JOSD2', 'ARHGEF6', 'OR4C15', 'NOX5', 'MC2R', 'ZC4H2', 'RASA4', 'SCAMP3', 'WDR49', 'PARP14', 'SPATC1L', 'ZNF738', 'SOX1', 'CBWD6', 'ARL4A', 'CTXN2', 'DNAAF2', 'AGRP', 'FAXC', 'IL1RAPL1', 'HEPACAM', 'SGOL2', 'MYEOV2', 'VPS18', 'CHRNA3', 'DDB2', 'C2ORF76', 'PAFAH2', 'CRYBB1', 'DSN1', 'CDK5R1', 'SASH3', 'SLX4', 'HECA', 'SNORD114-9', 'LGALS1', 'TTC41P', 'RPL12', 'TSTD1', 'SDHAF3', 'BMP7', 'SCARNA6', 'ZNF829', 'IL26', 'LRRC3B', 'TMEM95', 'KIF18B', 'ZNF579', 'MASP2', 'GALNT2', 'LOC644936', 'VSX2', 'SIAE', 'GBP4', 'SRSF8', 'OR11H1', 'VILL', 'CLUH', 'ZNF271P', 'N4BP2L2', 'ZFAND1', 'N6AMT2', 'MSH3', 'LOC100272217', 'KLHDC8B', 'PRODH', 'LOC100128573', 'C11ORF54', 'PDE3A', 'CRB3', 'MXRA7', 'SGCB', 'WDR83OS', 'SKIV2L', 'SLC25A14', 'DYM', 'RRP7A', 'RELN', 'WTIP', 'FKBP6', 'PHACTR2', 'PADI3', 'ZBTB8OS', 'SEPW1', 'MYEOV', 'C16ORF72', 'SLC22A1', 'ACOT12', 'LPGAT1', 'TPM4', 'ARL13A', 'ADRBK2', 'ECT2L', 'NOM1', 'SNORD54', 'MTERF3', 'NDUFA11', 'LOC285740', 'ZBED8', 'RDM1', 'C11ORF65', 'HIST1H1E', 'ZSCAN21', 'KLHDC1', 'SLC25A24', 'C1ORF189', 'ARL9', 'TINF2', 'CDS1', 'TCHP', 'MDN1', 'TMEM59L', 'HCAR3', 'CCDC70', 'TMSB15A', 'SNORD114-14', 'WDR88', 'USP31', 'ANO1', 'PIGG', 'EBNA1BP2', 'DDC', 'ABCB6', 'PKNOX1', 'OR4F5', 'SNORD115-33', 'ZNF423', 'AP3M2', 'PAM', 'CAPN3', 'SCFD2', 'TAOK1', 'NICN1', 'LINC00909', 'COL1A1', 'BTBD7', 'C4ORF50', 'COG2', 'RPS6KL1', 'ANKRD30BL', 'SAA2', 'NFKBIB', 'PSAPL1', 'ZNF879', 'PEX12', 'SNRNP25', 'MED25', 'BCO2', 'GLRA2', 'STOX2', 'GLT1D1', 'C15ORF26', 'LTBP4', 'FCER1G', 'CDK11B', 'PRELP', 'WFIKKN1', 'RTN4', 'SPATA6L', 'TMEM35', 'FAM210A', 'FBXO7', 'WBP1L', 'POMK', 'PRR14L', 'CDSN', 'SPSB1', 'DNAJA3', 'RRP15', 'ADGRB3', 'TSACC', 'OR5AP2', 'HRC', 'SEC13', 'ICE2', 'IFNGR2', 'C10ORF11', 'COQ10A', 'KHNYN', 'DYNLRB2', 'NR5A2', 'SLC34A1', 'BRCC3', 'UBE2A', 'TMEM256', 'MICU2', 'SLC10A2', 'INAFM1', 'CXORF40A', 'SRXN1', 'IER2', 'E2F4', 'ZNF322P1', 'FOXE3', 'SRSF11', 'SEPT3', 'SCGB1D2', 'PAPL', 'LGALS9C', 'TPCN1', 'KLRB1', 'SS18L1', 'SPANXN4', 'CNKSR1', 'METTL12', 'PTK2B', 'SLC27A1', 'ZNF594', 'CDH15', 'PSMB4', 'CCSER1', 'C5AR2', 'LRFN1', 'TBC1D22B', 'PRICKLE2', 'ADAMTS14', 'ALPP', 'EYA1', 'MRPS31', 'ZBTB3', 'ZNF473', 'TOB2P1', 'TIGD6', 'FAM227A', 'LCE1F', 'WDR66', 'PLIN4', 'GPM6B', 'BCKDHB', 'APOPT1', 'KRTAP5-8', 'SLC35A4', 'C9ORF129', 'PRKAB2', 'NFIX', 'SLC36A3', 'HIP1', 'TBC1D2B', 'BEND3P3', 'MAP2K6', 'MTCH2', 'POC5', 'RUSC1', 'FGD3', 'BEGAIN', 'SBF2', 'PLEKHA8P1', 'SLC5A11', 'HOXA11-AS', 'PRAMEF6', 'TMEM249', 'RASSF5', 'EPPIN', 'SERINC4', 'KLHDC3', 'ZNF260', 'STC1', 'BLCAP', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.0316075461152524e-15 NRMSE: 6.590815004377993e-16 MAPE: 3.798593388968877e-12 Pearson Correlation: 0.1149238050256128 Spearman Correlation: 0.03504532475467275 Coefficient of Determination: -2.8919386310191992 RMSE: 0.451774781798707 NRMSE: 0.28492355057940655 MAPE: 892.8992746747497 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: RandomForests Pearson Correlation: 0.5790261756075896 Spearman Correlation: 0.5347727420106868 Coefficient of Determination: 0.26971924017889326 RMSE: 0.20535800280178954 NRMSE: 0.13120072756659737 MAPE: 477.36764847949394 Pearson Correlation: 0.5043271824831076 Spearman Correlation: 0.44530979189266706 Coefficient of Determination: 0.21394617993869003 RMSE: 0.20303229994612335 NRMSE: 0.1280476160104209 MAPE: 485.0992102005152 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['PSD', 'NFYC', 'TMIGD1', 'KHNYN', 'C1ORF131', 'FAM205BP', 'CLEC18B', 'CEL', 'KDM4A', 'HTR1B', 'HNRNPAB', 'KLHDC1', 'SGCA', 'CCDC54', 'NCOA5', 'RBSN', 'SNHG5', 'NUDC', 'RAD9A', 'TBC1D3P1-DHX40P1', 'SH2B3', 'ITGB2', 'AHNAK2', 'PARP15', 'IL15RA', 'IKZF1', 'ANKRD55', 'OPN4', 'FETUB', 'THRB', 'LGALS9C', 'SUN2', 'SOX10', 'HSP90AB2P', 'MGC16275', 'DEFB104A', 'VCPKMT', 'SNORD62A', 'FKBP6', 'STC2', 'CTNND2', 'OR6M1', 'VNN3', 'CYP2A7', 'CXORF38', 'SPTLC2', 'ACVR1', 'TTTY23', 'TMPRSS3', 'RFPL1S', 'RND2', 'SPAG6', 'TMEM59L', 'IGSF8', 'HPS3', 'ABO', 'ZFHX4-AS1', 'LOXL2', 'ANGPTL3', 'HLA-DRB1', 'PAICS', 'MICAL1', 'GGTA1P', 'PRIM2', 'PSRC1', 'GNPDA1', 'OR6V1', 'ADD1', 'MCU', 'ABCF3', 'SCN1B', 'ARMC12', 'EML2', 'CAV3', 'PDXK', 'RRP1B', 'PPIG', 'CLDN11', 'ODF3', 'GTF2IRD1', 'SNORA44', 'HCRTR2', 'KLRF1', 'EMC6', 'CPNE1', 'CMPK1', 'DLL1', 'FAM201A', 'CGB', 'OR6S1', 'PSKH1', 'MYT1', 'HIST2H3C', 'PGK1', 'NQO1', 'HDAC10', 'TRA2B', 'PSMA6', 'ABHD15', 'ZXDB', 'PRAP1', 'CNNM2', 'TRIM8', 'TSPAN32', 'CCDC71', 'CHSY1', 'PLEKHG3', 'NR1I3', 'RNF10', 'PTGS1', 'TFEB', 'DTWD2', 'GRB2', 'EVA1B', 'ARL17A', 'NHLRC1', 'RPS3', 'TMTC2', 'LINC00301', 'ETFA', 'TBC1D3P2', 'HPGDS', 'ZNF44', 'RIIAD1', 'SLC1A3', 'SLC35F1', 'GSTM2', 'ZRANB2', 'TMOD3', 'SULT6B1', 'DHODH', 'ZNF805', 'EME1', 'XKR8', 'USP5', 'CLIP2', 'THAP8', 'RSPH3', 'SNORA16B', 'SNORD91A', 'RC3H2', 'CFHR4', 'GPBAR1', 'IQSEC3', 'USP3', 'DOK5', 'LRBA', 'PARK2', 'IARS', 'TNFRSF10A', 'RAB10', 'MPZ', 'C14ORF132', 'LRCH3', 'ASB16', 'HYAL1', 'PARVA', 'APITD1', 'CHGA', 'ANAPC16', 'CUL5', 'TSHR', 'FAM167A', 'OR8D4', 'ADSL', 'TTTY10', 'RNF214', 'STAM', 'TARP', 'MANEAL', 'CBL', 'MAN1A2', 'KIAA1522', 'LOC153910', 'TRIM69', 'OR5B12', 'SLAMF9', 'HNRNPH2', 'DSCAM', 'AKR1D1', 'FBXO43', 'TMEM102', 'CACNA1E', 'TRDN', 'ZNF793', 'PUS7L', 'LNX2', 'CACTIN', 'SNORD114-3', 'DOC2B', 'METAP2', 'MROH1', 'IL36G', 'LINC00265', 'RASSF4', 'KCTD17', 'PADI1', 'INPP5A', 'DSCC1', 'AK2', 'ENTPD8', 'PMPCA', 'POU2AF1', 'KRT28', 'MCM3', 'SH3PXD2A', 'PHACTR3', 'ARMC8', 'DMP1', 'SCFD1', 'CYMP', 'SPAG7', 'DLG5-AS1', 'DYNLL2', 'CCAR1', 'ZDHHC12', 'SLC22A9', 'ZNF32', 'GMDS', 'ARHGAP33', 'URAHP', 'MATK', 'FAM173A', 'ZNF511', 'ZNF320', 'ANKRD18DP', 'PLRG1', 'MASP1', 'MSGN1', 'LOC729603', 'VAMP1', 'ZNF331', 'RNF112', 'C9ORF91', 'SLCO2A1', 'OSGIN1', 'IFT22', 'ZBED4', 'C1ORF226', 'MKRN1', 'PGBD4', 'TRIM67', 'PLCG2', 'PRKRIR', 'LINC00635', 'CYP26C1', 'FAM120AOS', 'WDR34', 'ALOX15', 'HOMER3', 'ELOVL1', 'KDM5B', 'TMTC4', 'ERBB3', 'C3ORF67', 'SP9', 'WIPF3', 'TMEM248', 'IFNB1', 'FAM81A', 'ADAD1', 'MAX', 'GRIA1', 'TTC21A', 'ATP1A1-AS1', 'VWA5B1', 'CDH1', 'HS3ST2', 'BIRC7', 'NME3', 'LOC728554', 'RSRC2', 'TRIP12', 'HMGB4', 'ZNF74', 'ATG16L1', 'C1ORF228', 'TBC1D14', 'CCDC186', 'MUL1', 'ZSWIM1', 'NEIL3', 'CDCA7L', 'MEAF6', 'KIF1C', 'PHF2P1', 'C12ORF50', 'KAT2B', 'VILL', 'ZFYVE9', 'SBK1', 'PAPD7', 'SCARNA4', 'FAU', 'CSRP2BP', 'MAPT-IT1', 'SYBU', 'PRDM8', 'TSNAXIP1', 'VASH1', 'XCL2', 'IL10RB', 'CYP3A43', 'OR1J1', 'GALNT4', 'DFNA5', 'CLCN7', 'TAAR5', 'NHLRC4', 'DPM2', 'ZIM2', 'RBM19', 'FUS', 'NRGN', 'PLAC9', 'TMEM263', 'UBE2MP1', 'ALDH3B2', 'PABPC5', 'MMD', 'KCNK13', 'WIPI1', 'MCM3AP', 'MRPL30', 'EIF3G', 'CHRNA10', 'MTSS1', 'HCG27', 'SNORD69', 'PSMA5', 'ACAP2', 'RHOV', 'THEM4', 'HEG1', 'XKR4', 'CLEC17A', 'POLE4', 'ADGRF3', 'EFTUD2', 'CTSF', 'NCAPD3', 'ADAM11', 'MC4R', 'TIGD4', 'HLA-DQB1', 'FOXQ1', 'RAB11FIP5', 'RPL18', 'RNF215', 'LOC606724', 'CNKSR3', 'MFSD8', 'FAM103A1', 'ARGFXP2', 'SGCB', 'FAM3B', 'UGT2A1', 'UCMA', 'CEACAM1', 'SLC38A8', 'HIST1H3D', 'IMMP2L', 'B4GALNT4', 'LSMEM2', 'USP27X', 'CYP2E1', 'HSD17B10', 'SSR2', 'DSC2', 'C11ORF58', 'DPY19L2P2', 'SPAG16', 'TXNDC9', 'SLC10A1', 'PARN', 'DNAJB6', 'S100A14', 'ANXA4', 'SNORD18A', 'SNCAIP', 'CRLF1', 'NIM1K', 'EBF4', 'MEX3A', 'MFGE8', 'MLXIP', 'DLG4', 'RSPO4', 'STAP2', 'GLI2', 'IL11', 'PAPSS2', 'SLC13A5', 'NKAP', 'TET1', 'ARNT2', 'KATNAL1', 'RNF141', 'PCSK7', 'CCDC18', 'TPCN1', 'MYOF', 'EVX2', 'XPA', 'KANK2', 'DBP', 'CRIPAK', 'ABHD16A', 'CNTNAP1', 'TOMM70A', 'MSH5', 'NLRC4', 'NMNAT1', 'LINC01312', 'SERP2', 'RPS5', 'RASSF6', 'CCL3L1', 'UBXN4', 'NTF4', 'SSX3', 'SETX', 'ATP11A', 'APMAP', 'GPR17', 'BRD8', 'TIAL1', 'OR8B3', 'GPR18', 'SSX4', 'ZSCAN32', 'TMC1', 'CST1', 'PRSS21', 'DNAJC3', 'LOC100240735', 'SMR3A', 'SHANK3', 'SMN2', 'CCDC170', 'OLIG3', 'RNF121', 'BAZ1B', 'NTRK2', 'INSRR', 'TLN2', 'VPS13A', 'SNORD88A', 'CCR10', 'PPP1R1A', 'CA14', 'NAA60', 'PPFIBP1', 'SERPINB6', 'EMX1', 'MAFG-AS1', 'MAGEA6', 'RAP1GAP', 'ARL8A', 'GUCA2A', 'MICALL2', 'PRLH', 'C14ORF166', 'POM121L2', 'DNAJC5G', 'RENBP', 'RNF207', 'C7', 'ZNF596', 'AFMID', 'RASSF2', 'KRTAP5-4', 'MLLT6', 'LRP1', 'TMEM138', 'CTAGE6', 'CNTN6', 'DCUN1D5', 'FBP2', 'DUSP11', 'PLET1', 'SOX14', 'PHLDB1', 'TRIM16', 'SNORA45B', 'DEFB116', 'PLCD1', 'ESRG', 'RTN4', 'SPAST', 'FAM155B', 'SGK2', 'PCDHGA7', 'MBLAC1', 'CLK3', 'ZFYVE27', 'RPS12', 'CGA', 'SDC2', 'MAP3K14', 'OR5AP2', 'HOMER1', 'MAST1', 'TFF1', 'DDOST', 'LINC00667', 'ZSWIM6', 'THAP7-AS1', 'ENPP5', 'PTGDS', 'CLASP2', 'NOX5', 'IL24', 'FAM196B', 'NTM', 'ACBD7', 'MYLK', 'ITFG3', 'HINT3', 'P2RY1', 'SLC27A1', 'CRELD1', 'DNAH5', 'MGAM2', 'ALDH3A1', 'SIX3', 'SDHAF1', 'NYAP1', 'HAL', 'SDHAF4', 'ESRRA', 'KCTD14', 'SPATA31E1', 'TOPAZ1', 'H2AFJ', 'SIX6', 'GZMH', 'C14ORF93', 'LILRB4', 'DALRD3', 'PHF10', 'TADA3', 'PDE1B', 'TCF4', 'SNORA81', 'C7ORF50', 'NECAB1', 'HRCT1', 'SLC26A10', 'EIF2AK1', 'SNORA5B', 'GRK7', 'KIAA1324', 'TXLNB', 'ZPLD1', 'ZP4', 'ZFAND6', 'FRG2B', 'TNK1', 'CLTC', 'VDR', 'ALDH1A3', 'SP6', 'RASAL2-AS1', 'SOX21', 'ZNF213', 'CLIC1', 'WAS', 'TTC39B', 'PDE5A', 'IGFBP3', 'OR52M1', 'SNORD50A', 'RPP40', 'MAP3K9', 'ZNF212', 'CDH12', 'PINX1', 'RPL34-AS1', 'FSD1L', 'PID1', 'KLHL5', 'UBTFL1', 'C1ORF123', 'RSBN1L', 'ATPAF1', 'ALKBH5', 'CYB561D2', 'OLFM1', 'CASQ1', 'FCGR1C', 'HIST2H3D', 'MXRA8', 'ZNF252P-AS1', 'HIGD1A', 'ZDHHC13', 'FAM169B', 'HBA1', 'HIPK4', 'NETO1', 'CBFA2T2', 'RSRP1', 'C20ORF27', 'CCL28', 'CYB5A', 'TINF2', 'SLC27A4', 'SNORA37', 'CDRT1', 'CAMK1G', 'TNC', 'ZNF648', 'SMAD2', 'DMRT1', 'ASMTL-AS1', 'CTU2', 'OR14A16', 'SNORA57', 'LGALS9', 'LUZP2', 'LOC652276', 'NPIPB5', 'LRRC47', 'ZNF639', 'MLLT4-AS1', 'MRPL11', 'MRPL53', 'MYEOV2', 'SMCO2', 'ALS2CR12', 'LOC388242', 'FOXL1', 'CCNG2', 'C19ORF54', 'COG7', 'MYO19', 'NOP58', 'ZNF311', 'EIF1', 'PGBD2', 'LINC00473', 'DPH6', 'ZNF502', 'HCP5', 'BPIFC', 'ZNF536', 'RUNDC3A', 'KIRREL3', 'ATP6V1E1', 'GAPDH', 'EMG1', 'CHIC1', 'SPG7', 'C12ORF71', 'UBE2U', 'FKBP4', 'PRR5-ARHGAP8', 'KIAA1107', 'SMPDL3A', 'OR52L1', 'ADAM12', 'SSH2', 'LINC00244', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 4.234355631793254e-15 NRMSE: 7.213921719667537e-16 MAPE: 6.341058643713129e-12 Pearson Correlation: 0.44646586256145493 Spearman Correlation: 0.24369411550551434 Coefficient of Determination: -1.038957721153455 RMSE: 1.480276971120767 NRMSE: 0.26655327747339774 MAPE: 1018.6779769370717 Predictor: ElasticNet Pearson Correlation: 0.742789914327062 Spearman Correlation: 0.6066017276819509 Coefficient of Determination: 0.25478290943665527 RMSE: 0.8467065461794697 NRMSE: 0.14425039545112522 MAPE: 709.1128917595045 Pearson Correlation: 0.7385455966867146 Spearman Correlation: 0.5340946072830587 Coefficient of Determination: 0.17322095845927998 RMSE: 0.9426133841416395 NRMSE: 0.16973626681702011 MAPE: 236.44493850730592 Predictor: RandomForests Pearson Correlation: 0.8500225274830667 Spearman Correlation: 0.6601618045863458 Coefficient of Determination: 0.7192540812158996 RMSE: 0.5196946429688092 NRMSE: 0.08853853569497745 MAPE: 416.8623756307595 Pearson Correlation: 0.7758268224724381 Spearman Correlation: 0.6799678293014872 Coefficient of Determination: 0.5491517880944379 RMSE: 0.6960718141114705 NRMSE: 0.1253415590649819 MAPE: 212.90332022907202 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['ST3GAL2', 'CXCL16', 'OR51I1', 'EIF1AY', 'IARS2', 'SCARNA22', 'LIPH', 'PWRN1', 'MT2A', 'SLC1A1', 'OPN1SW', 'XXYLT1', 'SMAP1', 'MDC1', 'MARK2', 'SPATA31A5', 'PSMD10', 'TTC36', 'PRR14', 'SNAI2', 'CDC73', 'ZNF71', 'KIFAP3', 'CLVS1', 'HSBP1L1', 'LINC00663', 'P3H1', 'ATP5H', 'BPIFB1', 'DEFB109P1', 'MAP1LC3B', 'DOCK6', 'AGFG1', 'DOCK2', 'PPP1R14D', 'SUPV3L1', 'ATP6V1C1', 'UNC5CL', 'COL5A1', 'TMIE', 'DTX2P1-UPK3BP1-PMS2P11', 'KCNQ2', 'SUSD5', 'MFI2', 'PHYHIP', 'PILRA', 'OPN4', 'SAAL1', 'ICAM3', 'ERCC8', 'TRMT10A', 'IGF2-AS', 'ASB14', 'SNORD115-41', 'LPL', 'FAM210B', 'BOC', 'PCP4', 'STEAP2', 'FER1L4', 'RPS27A', 'NKIRAS1', 'APLNR', 'WDR86', 'TMEM169', 'DDX46', 'GAGE12J', 'TAGLN3', 'SUPT7L', 'PRNP', 'UCKL1-AS1', 'HKDC1', 'CNNM2', 'NLRP11', 'AICDA', 'MAP10', 'LINC01098', 'YWHAH', 'ELMOD1', 'YWHAG', 'PRKCDBP', 'FGF8', 'GAD2', 'ZG16', 'SLC26A8', 'KEL', 'ZMAT4', 'HSD17B7P2', 'HYAL3', 'SRR', 'TAF4B', 'METTL24', 'MCM4', 'MED30', 'WHAMM', 'FAM155B', 'RAB41', 'NEFL', 'FOXD3', 'CYP4Z1', 'CHN2', 'KIAA1614', 'BBS7', 'NME2', 'RYBP', 'TMEM126B', 'GXYLT2', 'BATF', 'SNPH', 'SCN4B', 'PLCD3', 'SLC12A9', 'AXIN2', 'ZNF526', 'CYP2B7P', 'GYS1', 'RBP2', 'PTDSS2', 'PYCARD', 'LOC284661', 'HDX', 'ANXA4', 'AGPAT5', 'CSF2RB', 'SLC1A4', 'CAPN11', 'NBPF1', 'RNF31', 'ADAM12', 'SOX11', 'IPO8', 'SALL1', 'ACSBG1', 'LCE4A', 'COMMD3', 'AMTN', 'ZNF646', 'SYNE1', 'MRPS12', 'STK38L', 'NUP88', 'NXF1', 'DEF8', 'ABHD16B', 'ODAM', 'NMB', 'PYCRL', 'MFSD6', 'C14ORF1', 'MRC1', 'VSIG10', 'PIP5K1B', 'FUOM', 'LDB1', 'ABCG1', 'STAU2', 'SCAND1', 'POLD4', 'NAALAD2', 'KLK6', 'CD19', 'SLC35B4', 'ZNF814', 'STEAP1', 'LIMD1', 'ZNHIT1', 'LYAR', 'LINC00320', 'RBM48', 'CACNA1H', 'CLUH', 'NLGN1', 'MMAB', 'SNORD94', 'PATE1', 'ZNF43', 'DDX6', 'SLC35F2', 'IDH1', 'NRIP3', 'ACPT', 'NYAP1', 'CDS2', 'DEFB128', 'TMEM43', 'MEGF9', 'LRRC17', 'TDRD7', 'PARP3', 'NCOR2', 'CABP4', 'SLC22A23', 'TMEM2', 'TMSB15A', 'LOC100133669', 'HHLA1', 'BTNL3', 'SLC4A1AP', 'FAM171A1', 'MROH6', 'ZNF282', 'CCAR2', 'RBFOX2', 'COPS5', 'HELZ2', 'ADCY3', 'HADHA', 'SHB', 'PSMD9', 'NIPSNAP3A', 'PRM3', 'MCU', 'LINC00473', 'ALPI', 'GNGT1', 'MIB1', 'ELFN1', 'CDC26', 'SDCBP', 'PTPRC', 'PRDX1', 'WHSC1L1', 'ZSCAN5A', 'SNHG4', 'GPR63', 'METTL22', 'ATP6V0C', 'CTSL3P', 'ZNF644', 'DSCR4', 'TRIM37', 'USP38', 'CYP2E1', 'SYT3', 'ALKBH8', 'ANKZF1', 'UNK', 'DEDD', 'KHDRBS2', 'GALNT14', 'SCCPDH', 'ZNF738', 'CLEC3B', 'SCARNA14', 'KHSRP', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.7435115680407217 Spearman Correlation: 0.7294579842210606 Coefficient of Determination: 0.5528094245789671 RMSE: 0.3194596162818574 NRMSE: 0.08735111281663173 MAPE: 193.08951913711294 Pearson Correlation: 0.020876825276142014 Spearman Correlation: 0.2916520156111672 Coefficient of Determination: -17.169929462538256 RMSE: 1.6393218962805622 NRMSE: 0.8068839409355664 MAPE: 371.1264443288507 Predictor: ElasticNet Pearson Correlation: 0.4531828096423113 Spearman Correlation: 0.4908307438029352 Coefficient of Determination: 0.0629009261382526 RMSE: 0.46244746052691266 NRMSE: 0.1264488474831531 MAPE: 228.5098315323929 Pearson Correlation: 0.33429485670096426 Spearman Correlation: 0.33671990922580086 Coefficient of Determination: 0.05214491204984051 RMSE: 0.3744196146039549 NRMSE: 0.18429155059825408 MAPE: 211.0623010658152 Predictor: RandomForests Pearson Correlation: 0.586194760602116 Spearman Correlation: 0.6135700606642649 Coefficient of Determination: 0.31347045367593396 RMSE: 0.39582139128616844 NRMSE: 0.10823101651436443 MAPE: 231.83450159613437 Pearson Correlation: 0.4318186091607276 Spearman Correlation: 0.3870601716485405 Coefficient of Determination: 0.17502199360900828 RMSE: 0.3493082189518804 NRMSE: 0.17193157301721262 MAPE: 219.73184763634546 Fold: 5 Protein: RB1 x_train_column_count: 371 x_train columns: ['PRAMEF4', 'INS-IGF2', 'DNAH17', 'RGSL1', 'FAM153B', 'B4GALT5', 'OPN4', 'HIST1H1A', 'PYGO2', 'DDX46', 'CUL3', 'AMPD2', 'ACAD9', 'HKR1', 'TMEM50B', 'PLIN5', 'CYLC2', 'KLRC2', 'MMP7', 'GPN2', 'CYB5D2', 'VPS35', 'B4GALT1', 'SNORD116-25', 'NCR3', 'LOC493754', 'STRN3', 'ENG', 'PAQR3', 'HES2', 'ZNF208', 'LINC00599', 'HYAL1', 'ITGA2', 'RASSF4', 'CD55', 'WDR86', 'FAM99A', 'GTF2IRD1', 'A1CF', 'CPSF2', 'BNIPL', 'LOC100129935', 'SSBP4', 'PPAP2B', 'GYG1', 'HRG', 'NEUROG2', 'DAPP1', 'MCTS1', 'VBP1', 'ZMYND15', 'SCARNA15', 'KLF15', 'SNORD115-25', 'LEPROT', 'ZNHIT1', 'GGTLC1', 'BTBD16', 'TAS2R10', 'RNASE2', 'CT45A2', 'KDM3A', 'OR2D2', 'TARBP1', 'MSANTD1', 'PIGG', 'ADGRG5', 'SAPCD1', 'METTL6', 'SYNGR3', 'KIAA1715', 'ANGPTL7', 'RPL15', 'FSD2', 'GNS', 'GALNT3', 'FYN', 'DUXA', 'CYP46A1', 'C16ORF92', 'GRIK1-AS1', 'NLRP4', 'PRDM1', 'CAB39L', 'TEX13A', 'SDK1', 'SAMM50', 'SLC6A8', 'RASL10B', 'RNF103', 'DAD1P1', 'CEBPZ', 'SIGLEC10', 'SSFA2', 'BNC1', 'SUCLA2', 'OR5D18', 'PBDC1', 'IL12RB1', 'C19ORF80', 'OR13G1', 'ALOX5', 'PAK6', 'IFI30', 'KLHL4', 'SOST', 'WIPI1', 'SLC18B1', 'SNORA81', 'A2ML1', 'OR2B11', 'CCDC91', 'ALDH1L2', 'ABCC9', 'RDH14', 'SNORD116-23', 'SYT12', 'OR3A1', 'TGM7', 'KCNK13', 'USP45', 'RXFP1', 'FTHL17', 'ASCL3', 'TVP23B', 'TM2D2', 'LRRC37A', 'POLL', 'MRPL50', 'ABCA12', 'SOX8', 'MXRA5', 'ZNF337', 'HNRNPA3', 'PCED1A', 'SLC6A2', 'HPYR1', 'NEFH', 'MED29', 'RAB3C', 'DNAH11', 'UHMK1', 'EFNA2', 'XKRX', 'POTEM', 'PCDHB17P', 'PAQR9', 'LOC285847', 'ZNF845', 'BRSK2', 'RPL32', 'IARS2', 'TRIML2', 'BOP1', 'ZNF221', 'PRSS3', 'TMCO4', 'HIST1H2AJ', 'LAMA5', 'INTS12', 'PKHD1L1', 'SGOL2', 'RNY4', 'ZNF609', 'CYP1B1', 'WDR90', 'EBAG9', 'FIBP', 'ZSWIM6', 'CMTM5', 'SH3PXD2A', 'ATXN10', 'BCAR3', 'MAP3K10', 'KIAA0556', 'ARSH', 'CKLF', 'OR9A2', 'ATP13A5', 'HBA2', 'C17ORF89', 'AKAP14', 'TMED6', 'SPCS2', 'FAH', 'KRT14', 'FBXO16', 'PSMB6', 'CCL4L1', 'KRT222', 'PER1', 'FOXA1', 'SORCS1', 'DAZ4', 'OR4F17', 'MUC13', 'MRPS18B', 'PCNXL3', 'CLDN18', 'GPR37', 'CCL19', 'RFPL3S', 'LRRC3', 'FOXE1', 'DHCR7', 'UGT2B28', 'PLOD3', 'TAS2R7', 'RP1', 'RTN4RL2', 'ANPEP', 'KLHDC4', 'CAPRIN1', 'TIFA', 'SCARNA9L', 'VTI1A', 'FAM157B', 'MYO1C', 'RABL2B', 'ERICH3', 'DDX27', 'NKIRAS1', 'PHKB', 'CECR5', 'TWISTNB', 'DNM1L', 'XRCC6BP1', 'LRRC57', 'PPP1R36', 'CYBRD1', 'SSX2IP', 'HIST1H2BH', 'RBBP8NL', 'CCDC50', 'CABIN1', 'NUP133', 'UFSP2', 'RASA2', 'MAL', 'COL23A1', 'NOL4', 'TMEM235', 'GPR143', 'CCDC69', 'PHLDA2', 'MIER1', 'GFOD2', 'CDC20B', 'NDUFB6', 'THBS2', 'USP43', 'ANKRD28', 'PNPT1', 'CT45A5', 'SAV1', 'GP5', 'SPTSSB', 'TBCE', 'TAF1C', 'CACNB2', 'FAM169B', 'CYP1B1-AS1', 'ZNF584', 'C4ORF33', 'NEK1', 'SNRPD2', 'RPL8', 'DUSP9', 'PMS2P5', 'HPD', 'PIK3CG', 'SLC28A2', 'SYPL2', 'HMMR', 'TRIT1', 'GEMIN7', 'OR6A2', 'ADTRP', 'B4GALT2', 'MFSD4', 'REC114', 'SLC25A12', 'DMWD', 'C18ORF8', 'ANKAR', 'WASH2P', 'RANBP10', 'BEND3', 'TTC29', 'CXORF40B', 'SYNGR1', 'HSPA5', 'PTPN5', 'TMEM176B', 'EVI5', 'ZNF385D', 'VWCE', 'KAT2B', 'PLK1', 'ZNF34', 'VPS33B', 'MAL2', 'ODF4', 'UBXN1', 'C16ORF52', 'ATAD3C', 'FGF20', 'ARHGAP44', 'GCC2', 'DNAJC6', 'KCNIP4', 'SPP1', 'TXLNB', 'DDX28', 'CYP21A2', 'ASF1B', 'EXOC3L4', 'ZW10', 'CLSTN2', 'INF2', 'ZMAT5', 'LYZL4', 'OR4B1', 'CALCA', 'ZNF79', 'ADCY9', 'SLC5A7', 'INO80C', 'SLC5A6', 'XKR8', 'ZNF570', 'TBC1D14', 'DOCK2', 'HAVCR2', 'PLCB3', 'NUDT16L1', 'SLCO2B1', 'HIST1H4J', 'UBA2', 'HK2', 'MLH1', 'MAATS1', 'DUSP16', 'CACNA1S', 'ARHGEF9', 'IRF2', 'MYO1D', 'BPIFA4P', 'EPHB3', 'HIST1H4K', 'LRRC3B', 'NHLH2', 'TGOLN2', 'ISG15', 'C1RL-AS1', 'XKR4', 'SAA3P', 'HDHD1', 'NBN', 'MAPRE1', 'LPGAT1', 'AMER2', 'ATP8A1', 'FLJ25758', 'GRXCR1', 'IPO5', 'ZNF502', 'NCL', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.8223172807626401 Spearman Correlation: 0.7397956004897857 Coefficient of Determination: 0.6762056816275566 RMSE: 0.13309882936005554 NRMSE: 0.065752819274517 MAPE: 325.7460526261341 Pearson Correlation: 0.06556175642122532 Spearman Correlation: 0.03767378645619023 Coefficient of Determination: -10.657020409523362 RMSE: 0.8206787045435672 NRMSE: 0.41379036390676605 MAPE: 3426.3385108043835 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: RandomForests Pearson Correlation: 0.6354498426378916 Spearman Correlation: 0.5027670567416069 Coefficient of Determination: 0.19501415863403315 RMSE: 0.20986196969337625 NRMSE: 0.1036749626738939 MAPE: 129.88730510890508 Pearson Correlation: -0.018963877647583442 Spearman Correlation: 0.046870908614820635 Coefficient of Determination: -0.134431484460531 RMSE: 0.25601683328599006 NRMSE: 0.1290849854214096 MAPE: 328.4230668986771 Protein: CDH1 x_train_column_count: 836 x_train columns: ['TM9SF1', 'PPP1R3E', 'SNX4', 'ARHGAP5-AS1', 'LEMD2', 'PROCR', 'BRAF', 'PTGER3', 'ZFY', 'SNORD38A', 'CYP1B1', 'FMN1', 'IGLL1', 'ATP1B1', 'VILL', 'E2F5', 'GLOD5', 'HGSNAT', 'LYRM1', 'VWF', 'EIF2B2', 'SOX17', 'RPUSD4', 'GBF1', 'FCHSD2', 'HIST1H3D', 'C3ORF79', 'E2F6', 'CYBB', 'BRINP2', 'DLK2', 'C20ORF195', 'TAT', 'SRSF5', 'TRIP11', 'TAGLN2', 'CYP2B7P', 'RAP1B', 'ADGRG5', 'COLQ', 'C9ORF78', 'OR2A25', 'MEFV', 'ARX', 'MYLK', 'CLCA3P', 'ATF7IP', 'CSGALNACT2', 'C16ORF54', 'GALE', 'ABHD12B', 'CCNT1', 'TMEM50A', 'CCDC74B', 'ASTN1', 'LINS', 'CAP1', 'CCL20', 'MYO1D', 'C7ORF73', 'TAP2', 'PEBP1', 'SV2C', 'GEN1', 'ADA', 'NCF1', 'ASIC4', 'AIFM2', 'DGCR11', 'TAF6', 'MRPL28', 'NPTX2', 'PRR23C', 'C17ORF82', 'BPIFB6', 'SULT2B1', 'C17ORF97', 'FAM155A', 'GIPC1', 'LINC01098', 'VWA5B1', 'ZNF446', 'ZNF280B', 'LGALS9C', 'FGF16', 'SPTLC3', 'PHF12', 'USH2A', 'ARMC1', 'SLC26A3', 'C2ORF48', 'ZFYVE16', 'SUMO1P1', 'RAB2B', 'SIGLECL1', 'LINC00602', 'COL27A1', 'ANPEP', 'DGKQ', 'AQP3', 'GP1BA', 'SNORD116-23', 'CCDC54', 'EPHA4', 'PARD6G', 'SLC16A14', 'CYB5B', 'DOC2B', 'TCEAL3', 'GSPT1', 'OR51G2', 'FAM98C', 'ANKS4B', 'RGS10', 'GPR141', 'ASB16-AS1', 'TMEM163', 'PCNA', 'PRSS48', 'SNHG12', 'GABRB2', 'PMS2CL', 'BZRAP1', 'SI', 'LPCAT2', 'PRRC1', 'HECW2', 'RHBDD1', 'TYROBP', 'PRKAR1B', 'ZNF462', 'TP73', 'TXNL4B', 'GPER1', 'TIMD4', 'NEUROD2', 'CEP162', 'SNORD68', 'OSBPL10', 'PRDX3', 'BTLA', 'GRK6', 'GHRLOS', 'CD209', 'HGH1', 'RNPS1', 'LCN12', 'NBEAL2', 'ZNF594', 'SPACA1', 'IL2RB', 'RBP7', 'ZNF571', 'WASH7P', 'PTPN11', 'HAR1A', 'THUMPD3-AS1', 'SEMA4C', 'CCDC121', 'LBP', 'CNFN', 'PPP3CC', 'CRSP8P', 'SKIV2L', 'GNE', 'ANAPC4', 'TBX15', 'TOMM40L', 'PSORS1C1', 'SPATA2', 'CPEB2', 'THAP10', 'OR6C70', 'CALB2', 'LOC399815', 'EXOSC8', 'CNTNAP3', 'KLC4', 'IDH3B', 'SNTB1', 'RBMY1A3P', 'PPP2R3B', 'TMEM248', 'PTGR1', 'KRT37', 'LDOC1', 'BIRC3', 'SCFD1', 'LRWD1', 'NIPA2', 'NXNL2', 'SSBP1', 'WDR91', 'TNNI3K', 'KCNJ8', 'TRANK1', 'ARHGEF26', 'AGPAT9', 'ALDH16A1', 'ZCCHC10', 'NUP54', 'TMEM200C', 'SELK', 'SNORA52', 'GLRX3', 'SENP3', 'NDUFB9', 'PIAS1', 'PPAT', 'ZNF280A', 'SBSN', 'EPG5', 'MTERF4', 'RNF165', 'CST13P', 'SCRN2', 'TSPAN18', 'TBCK', 'KRTAP17-1', 'OR8I2', 'SGCZ', 'POLR1C', 'ENAH', 'LOC100132287', 'SNORD45B', 'DHX57', 'LOC100129935', 'ATP6V1G1', 'SLC44A5', 'RPS26', 'FAM179B', 'AGMAT', 'ZNF350', 'INSL5', 'GYS1', 'PPP2R5E', 'SUSD6', 'OR4C13', 'FAM102B', 'CEL', 'NUP85', 'KIAA1919', 'KIAA0020', 'IL21', 'ZNF207', 'COL11A1', 'ZNF638', 'MEIS2', 'ABCB5', 'C12ORF57', 'FOXL2NB', 'PURA', 'TAS2R46', 'VGF', 'TMEM55A', 'CRLF1', 'NUTM2A-AS1', 'LY86', 'COL6A4P1', 'LIN52', 'EPHB3', 'DHRS4-AS1', 'CHD1', 'DHH', 'ENO3', 'SAMM50', 'GAD2', 'SRP54', 'ZBTB1', 'IQSEC3', 'RPS6KA6', 'OIP5-AS1', 'BCO1', 'CAPN5', 'DUSP21', 'MRPL3', 'DPH7', 'DTHD1', 'PCDH17', 'DNAH5', 'PRIMPOL', 'ACAA2', 'RASSF2', 'CUL5', 'PCGEM1', 'TTTY11', 'BAZ2B', 'NCLN', 'ARHGEF18', 'DENND1B', 'AGT', 'ALDOA', 'GGT8P', 'KCMF1', 'CXXC5', 'SLC10A5', 'USP34', 'MARCH4', 'MAB21L3', 'STEAP1B', 'MTMR6', 'NEK2', 'SSTR4', 'NCBP1', 'ZBTB34', 'LRAT', 'DAW1', 'ZNF160', 'DLX6-AS1', 'PKIA', 'PAX6', 'PHGR1', 'ARHGAP11A', 'ATG7', 'LRRC37BP1', 'LEAP2', 'C9ORF142', 'ZNF415', 'RPRM', 'PAQR4', 'WDR93', 'ZNF280C', 'STEAP2', 'EPS15', 'SH3BP2', 'IFI6', 'PKLR', 'CDH19', 'SNORA65', 'KRT73', 'STAT6', 'KDM5A', 'SLC32A1', 'THAP5', 'MXRA7', 'FAM86JP', 'ALDH9A1', 'TGS1', 'FAM74A1', 'ZNF530', 'SPATA8', 'NPLOC4', 'GPR87', 'CHN1', 'TIMM8B', 'DOK5', 'BBS7', 'EIF6', 'TTL', 'SLC36A4', 'PRF1', 'ABRA', 'UBXN2A', 'EIF1AX', 'EIF2B4', 'MRPL1', 'GTF2H1', 'ABCG5', 'IGF2BP2', 'SEPT9', 'CSDE1', 'RFPL4B', 'AQP12B', 'MED25', 'AQP2', 'USP38', 'SDHAF3', 'ADD1', 'KIF26B', 'ATAT1', 'STAT3', 'ASB11', 'SEC23B', 'HERC1', 'IFNA13', 'HTN1', 'ZNF680', 'CYTIP', 'PIGO', 'BCL10', 'LDB1', 'MXRA8', 'METTL7A', 'GRM7', 'TCF19', 'PTGFR', 'ARSB', 'RAB15', 'ROS1', 'OIP5', 'ALPPL2', 'MAGI2', 'JMJD1C', 'FCHO2', 'SLC25A42', 'SERINC4', 'DICER1-AS1', 'BCL9L', 'COPS5', 'KRT80', 'CAV3', 'GGT3P', 'FHDC1', 'SH2D7', 'BCORP1', 'PDLIM5', 'ARSG', 'H1FX', 'DYTN', 'ZFP30', 'LOC100130331', 'NOL4', 'ATP5G1', 'LTBP2', 'CLDN7', 'ZNF587', 'ASB6', 'MAVS', 'DDT', 'COL1A2', 'HHIPL2', 'WFDC2', 'ZBBX', 'SCN1A', 'NIPAL4', 'SEPT2', 'RFT1', 'PFN4', 'OR52K2', 'RAB3A', 'H2AFX', 'LINC01128', 'COMMD5', 'EML4', 'MAGEA6', 'C2ORF50', 'COX19', 'EXOC5', 'TRIM13', 'CAPNS2', 'CNTN6', 'SNAP23', 'TCTA', 'HRASLS', 'UNC93A', 'REEP5', 'TDRD1', 'SNORD121A', 'HES5', 'MAP3K13', 'GNPDA1', 'VDAC3', 'FBXO6', 'TRAF4', 'RASSF8', 'TRIM66', 'C7ORF69', 'AOX1', 'GATS', 'THRSP', 'ARNT', 'AKAP3', 'CCNA2', 'SLC2A11', 'GSKIP', 'GSTM2P1', 'AMBRA1', 'SNORD123', 'FARP2', 'PTK6', 'SNX6', 'SVIL', 'TPD52', 'SH2D1A', 'MATN1', 'PLD5', 'SPAG11A', 'PTPN9', 'LDAH', 'MFN1', 'ADCK2', 'SNORD49A', 'MEOX2', 'TMEM167B', 'EVA1A', 'GPR52', 'SNORD1A', 'TTTY17B', 'CX3CL1', 'DOCK10', 'MTA3', 'SDF2', 'EMB', 'SFT2D3', 'SESN1', 'SMYD1', 'CLCN4', 'LRP12', 'WFDC11', 'SOX5', 'SLC25A14', 'ARHGAP1', 'SPATA25', 'ZNF781', 'STC2', 'PXDN', 'KIAA0226L', 'SYN3', 'TBCE', 'LILRA5', 'ABCA2', 'RNF19A', 'RSPH3', 'AATBC', 'ARID2', 'TPM1', 'ABHD2', 'C10ORF105', 'SNORD115-17', 'TRIP12', 'GSS', 'LOC344967', 'ZNF527', 'SLC26A11', 'KIF3C', 'HEG1', 'CLTCL1', 'RASGRF1', 'CLU', 'CCDC38', 'SLC26A4', 'CKM', 'THNSL1', 'XYLT2', 'CD3E', 'IKZF5', 'PCSK6', 'IGFBP2', 'ACOT1', 'SPPL3', 'SNX25', 'UNC13D', 'GSTO1', 'MRPS22', 'TBC1D3P2', 'KANSL2', 'ARRDC4', 'C16ORF46', 'KANSL1', 'APBA2', 'DIO3', 'GSTT1', 'LOC284578', 'ARHGAP35', 'PLN', 'CNOT3', 'DPY19L2P2', 'C1QTNF8', 'PHAX', 'NPAP1', 'CRELD2', 'KDM4A', 'SCN1B', 'ZNF770', 'WNT8A', 'AEN', 'HTT', 'KLHL33', 'SNAP29', 'MTCH2', 'AMDHD2', 'LMO3', 'AHCYL2', 'REXO1L6P', 'TTC21B', 'SNORA71C', 'XBP1', 'ATP6V1C1', 'RAB35', 'TMEM2', 'KLHL25', 'GPR3', 'SDF4', 'FCMR', 'FERD3L', 'KRTAP4-11', 'TMEM263', 'SETMAR', 'MRC2', 'ABLIM3', 'EDEM1', 'GPR160', 'TRNT1', 'HRASLS2', 'EMCN', 'NR1I2', 'PLIN3', 'TCEA2', 'KRT74', 'C10ORF32', 'NEIL3', 'TRAPPC11', 'DENND6A', 'ZNF830', 'C18ORF8', 'TRAPPC3', 'TSHZ3', 'GTPBP4', 'DCAF12', 'ZNF697', 'C1QTNF9B-AS1', 'KLHL40', 'HLA-J', 'NIPAL2', 'CYP26B1', 'SNORD45A', 'CTDSPL2', 'PRR19', 'PSMD5', 'AMER1', 'CCDC168', 'PNRC1', 'C2ORF54', 'CALHM1', 'CATSPERG', 'KCNMB3', 'FAM73A', 'SNORD79', 'PHOSPHO1', 'NXPH3', 'IFT27', 'SMCO1', 'VNN1', 'FBN3', 'GNA12', 'GNPTAB', 'RAVER2', 'TFCP2', 'HMP19', 'TMEM261', 'RNASE6', 'KCNN2', 'REST', 'GTSE1', 'SAYSD1', 'CCDC66', 'UBE2C', 'C8ORF82', 'POLR3GL', 'C6ORF1', 'TARS', 'CDHR5', 'FCRL2', 'EED', 'MAN2C1', 'ISX', 'SCD5', 'AGFG1', 'TRPT1', 'ULK1', 'TLE4', 'RRP1', 'LANCL3', 'SCARNA20', 'UBE2DNL', 'TNFRSF10D', 'TMEM201', 'ZC3H12C', 'GNPAT', 'LINC01551', 'CSN3', 'ZNF675', 'EMBP1', 'OR6C6', 'CD24', 'COL11A2', 'TMEM177', 'CAD', 'GNAS-AS1', 'A2M-AS1', 'ACTN1', 'TRIM10', 'C1R', 'MTHFR', 'LOC100128288', 'ILDR2', 'OMG', 'GLP2R', 'TSEN54', 'VPS36', 'RPSAP9', 'UNC5D', 'MED12', 'ABCC10', 'AWAT2', 'SNORD113-7', 'CBX2', 'LOC647859', 'SPEF1', 'LINC00298', 'OR51F1', 'SLC25A1', 'RPL31P11', 'XPO6', 'NANS', 'TBC1D2B', 'APMAP', 'LYSMD3', 'ZNF804B', 'ANGPTL5', 'UBE2V2', 'ABCA9', 'SLC7A2', 'FBRSL1', 'PRPF3', 'DCDC2', 'TIMM21', 'LRRK1', 'PLCD3', 'GNAI3', 'TEX10', 'PRMT6', 'ERMP1', 'SERPINA7', 'E2F7', 'TSR2', 'POR', 'DIRC1', 'POU6F2', 'GCNT1', 'ELL3', 'SYTL5', 'MBOAT2', 'MCPH1', 'PHLPP1', 'SNCG', 'MMP7', 'ARFGAP3', 'CALCOCO1', 'SORBS1', 'SDHD', 'PEA15', 'G3BP2', 'MLH1', 'RBMY1A1', 'C10ORF107', 'METTL7B', 'FDX1L', 'DHODH', 'HIRIP3', 'RBMXL3', 'SCNN1G', 'MGAM2', 'SEC14L3', 'HHIPL1', 'HOXB13', 'FASTKD5', 'C17ORF105', 'CLTC', 'HEPHL1', 'CSN1S1', 'KRT81', 'TSPAN17', 'JAM2', 'ANKRD34C', 'C9ORF116', 'RASSF4', 'FER', 'RAB6C', 'CLEC1A', 'NT5C3A', 'CEP131', 'RFPL1S', 'RTP4', 'TBC1D3H', 'NEDD9', 'MYO9B', 'FAM46A', 'CSRP1', 'ACER1', 'PIFO', 'FGD3', 'TTTY9B', 'BACE1', 'COQ3', 'PZP', 'CCL27', 'MBTPS2', 'CEP350', 'SAP30L', 'PIGA', 'LOC340017', 'CTRB2', 'RPS6KA2', 'CHRNA9', 'RXFP2', 'BCL3', 'TRADD', 'OR4K17', 'UBALD1', 'HYPM', 'MAP3K4', 'LINC00879', 'DNAH7', 'ATG5', 'SNORD18B', 'CYP2B6', 'SFTPA2', 'PQBP1', 'GPR156', 'MED14', 'UPF3B', 'ATG101', 'ZNF628', 'SUSD5', 'PLEKHG7', 'C7ORF31', 'DCST1', 'SERPINB1', 'CHAC1', 'SLC6A1', 'PDIA6', 'SELV', 'CD19', 'RBM41', 'TAF8', 'CYB5D2', 'TUSC5', 'RFESD', 'ATP13A2', 'HOXB1', 'ECHDC1', 'CADM4', 'INTS8', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.314621540550138e-15 NRMSE: 6.870197669740036e-16 MAPE: 2.122304120708151e-12 Pearson Correlation: 0.26040563798463656 Spearman Correlation: 0.281941171336301 Coefficient of Determination: -1.6253882439926408 RMSE: 1.8823857227209686 NRMSE: 0.37017673648914845 MAPE: 5864.765063080474 Predictor: ElasticNet Pearson Correlation: 0.6994180170872926 Spearman Correlation: 0.6496150078897209 Coefficient of Determination: 0.3832094460028782 RMSE: 0.8843726882377537 NRMSE: 0.14081919178334346 MAPE: 193.7794275799436 Pearson Correlation: 0.5286424702561695 Spearman Correlation: 0.590194391451265 Coefficient of Determination: 0.23293741521621347 RMSE: 1.0174832109973457 NRMSE: 0.2000910918167481 MAPE: 916.7587167085732 Predictor: RandomForests Pearson Correlation: 0.7852746165343615 Spearman Correlation: 0.7032310128095981 Coefficient of Determination: 0.6115177825334365 RMSE: 0.7018624967452063 NRMSE: 0.11175798489621448 MAPE: 135.5617131178665 Pearson Correlation: 0.6491492111367486 Spearman Correlation: 0.6068462285647039 Coefficient of Determination: 0.41412266043988644 RMSE: 0.889232244891276 NRMSE: 0.17487015887421603 MAPE: 465.45900371717073 Protein: CDH2 x_train_column_count: 474 x_train columns: ['ZDHHC18', 'KIR2DL3', 'NQO2', 'GRK7', 'DNAH10', 'ATP6V1C2', 'ZBTB6', 'BAIAP2L1', 'ADCK3', 'SNORD114-16', 'UNC79', 'METTL12', 'FGL2', 'MUTYH', 'CMTR2', 'KPNA7', 'PNPLA6', 'RBM7', 'ERMARD', 'ASCC3', 'WNT16', 'MOGAT1', 'GCM1', 'PLA2G4F', 'ZPR1', 'FAM177B', 'LRIT3', 'SLC25A19', 'TLL1', 'SYT17', 'C4ORF32', 'RPL27', 'TTTY21', 'ACSM4', 'MGAT5', 'MRPL27', 'BTN1A1', 'KLK10', 'HAVCR1P1', 'EIF4E2', 'TSTD1', 'LOC646813', 'FILIP1L', 'SNHG10', 'DSCAM', 'LINC00928', 'RAET1E', 'PPAT', 'ZPBP', 'HAPLN2', 'CUX1', 'CIB2', 'NINJ1', 'H3F3AP5', 'UNKL', 'BAZ2B', 'NAB1', 'SSTR5-AS1', 'PRSS58', 'GPR85', 'RABGGTA', 'FJX1', 'TMED7-TICAM2', 'GBA3', 'LMBRD2', 'C5ORF63', 'KGFLP1', 'AKAP6', 'NXF2B', 'RORB', 'KIF3B', 'DACH2', 'RCC2', 'MMP12', 'LINC01341', 'CXCL13', 'AUNIP', 'ORMDL2', 'PRSS41', 'PLAG1', 'TEX15', 'MLIP', 'TLR9', 'ZFP69B', 'AMZ2P1', 'COCH', 'ZNF624', 'LYZL4', 'CRABP2', 'TMX3', 'PGAM1', 'SNORA15', 'C19ORF48', 'PRNT', 'CHCHD6', 'LINGO2', 'FLVCR2', 'AVPI1', 'STRA13', 'SELM', 'RPAP2', 'CLYBL', 'CHCHD10', 'PCDHA7', 'RPL14', 'MOCS1', 'ZNF619', 'FLJ13224', 'UBE2L3', 'FKBP3', 'KIAA2022', 'IRGC', 'CHRFAM7A', 'SEPT10', 'LRR1', 'TRIM3', 'CSTF3', 'SSTR2', 'SNCG', 'C20ORF195', 'FAM169A', 'SSX2IP', 'MICAL3', 'MRPS31', 'STAC3', 'DNAJC15', 'C11ORF84', 'CDC42SE2', 'NKIRAS2', 'PTPRVP', 'RBM12B', 'CMPK2', 'ABCC5', 'NVL', 'CACNB2', 'TACSTD2', 'NLRP8', 'HIST2H2AC', 'DNAJB6', 'INHBA-AS1', 'SNORD119', 'ZNF382', 'MS4A13', 'C1ORF116', 'MIB2', 'OPN5', 'LOC148709', 'TAX1BP1', 'LAMTOR1', 'ZNF564', 'CD300LG', 'GNB1L', 'PPDPF', 'OR2J2', 'LDLRAD2', 'S1PR5', 'PCDH7', 'NKTR', 'CTHRC1', 'PRSS33', 'RAB8B', 'LRRC57', 'FBXL22', 'RBP3', 'HHLA3', 'PDIA5', 'ECT2L', 'ARNTL', 'SNORD116-1', 'ITSN1', 'USP16', 'C9ORF171', 'EPM2AIP1', 'SMARCE1', 'BCL2L1', 'CDKN2D', 'APOC2', 'LINC00620', 'TUBB6', 'BPIFA1', 'MAD2L2', 'RPS23', 'OPHN1', 'NTM', 'SAP30L', 'MIS18A', 'MAPT-AS1', 'CPT1A', 'SLC26A2', 'ELF4', 'INSL5', 'PRKRIR', 'GSTZ1', 'CDC37', 'LYPLA1', 'UBE2D4', 'FAM71A', 'MRPL20', 'TPX2', 'C17ORF85', 'LINC00189', 'TCEAL1', 'SNORA70', 'C1QBP', 'MIR155HG', 'FAM84A', 'TEAD1', 'C6ORF163', 'MYOM2', 'ITGB3', 'CERCAM', 'TAF4B', 'TRA2A', 'RAB43', 'RNF17', 'GFRA1', 'EPC1', 'LINC00652', 'AQP8', 'RTCB', 'MYH7', 'ZNF784', 'DCANP1', 'RPS27L', 'TICRR', 'EHBP1L1', 'FAM228A', 'POMP', 'ELMSAN1', 'MTCL1', 'ARHGEF16', 'OR51G1', 'GOLGA6L6', 'ITGA3', 'RPL23AP53', 'PSME3', 'CMTM5', 'FAM179B', 'DRAIC', 'BDP1', 'LOC728554', 'ZNF565', 'USH1C', 'C5ORF28', 'DHCR7', 'TRIM50', 'HDX', 'FAM126A', 'RAD9B', 'GINS4', 'PCYT1A', 'RRAGA', 'PRDX5', 'RBM24', 'PCDHGA5', 'TNFSF4', 'GPD1L', 'GOLGA3', 'DLX3', 'SOSTDC1', 'FCN2', 'HSPB11', 'SPRY2', 'MBD5', 'TTTY1B', 'OR6C75', 'SMTNL1', 'PGPEP1L', 'SOD2', 'COL24A1', 'SNX24', 'MORF4L2', 'IL17RC', 'TNFRSF4', 'TAS2R13', 'IRF4', 'DKK2', 'SLC10A6', 'PITPNA', 'S100G', 'WDR72', 'ATP7B', 'HNRNPUL1', 'ADARB2', 'CAMKMT', 'SNORD29', 'HIF1A', 'CCDC113', 'POLD1', 'HSBP1', 'BPY2', 'BTNL9', 'OR4N4', 'FAM178B', 'PHLPP1', 'TAAR8', 'GID8', 'CDH11', 'PXT1', 'TM4SF1', 'CTNNA2', 'ANXA2R', 'PLAC1', 'TCP10L2', 'IL24', 'LINC01599', 'CGA', 'FOXN2', 'MESTIT1', 'SRD5A3', 'NCL', 'PITX3', 'CTAG2', 'PAX2', 'BCRP3', 'FAM201A', 'CAAP1', 'SNRPD3', 'ADAD1', 'SCAND2P', 'LIN52', 'CACFD1', 'FAM120B', 'LOH12CR1', 'C1ORF189', 'RBBP9', 'CYB561A3', 'TOB2P1', 'DNAJC10', 'SLC45A2', 'P4HB', 'OTUD5', 'LINC01558', 'PPRC1', 'PRG2', 'SNORD35A', 'LOC400043', 'MIPEP', 'GNB1', 'TULP2', 'TIMM9', 'FAM222A', 'DAPK3', 'PRR23C', 'DTNA', 'ARL10', 'CDHR1', 'SMC6', 'NLGN2', 'COA7', 'DNAI1', 'KCTD2', 'RNF169', 'RAD18', 'PURB', 'ADAR', 'IL17C', 'TSPEAR-AS2', 'PNPLA8', 'ADPRM', 'WFDC8', 'CD27-AS1', 'CMIP', 'ESCO2', 'TMEM141', 'CLCF1', 'CA5B', 'SNORD111B', 'STRADA', 'DPP4', 'COQ5', 'SLC22A9', 'SPOCK2', 'DYNLT3', 'ELMOD3', 'DCP2', 'UBE4A', 'ING2', 'PTGDS', 'SLC6A1', 'ERCC6L', 'OR6C2', 'FAM196A', 'PTPRU', 'HMGN3', 'LRRC47', 'RPL6', 'MAD2L1BP', 'GSR', 'KIF22', 'LINC00113', 'DKKL1', 'TRMT5', 'PPP3R2', 'RNF168', 'GLDC', 'TACR3', 'SRFBP1', 'SPATA2', 'ATG4B', 'DDX28', 'EFNB3', 'RBM28', 'XAGE5', 'SPATA20', 'TMEM241', 'ZNF735', 'C15ORF61', 'PSG11', 'FAM110B', 'RAD51D', 'LINC00298', 'SNORA8', 'CERS4', 'NPIPB5', 'KRT36', 'JADE2', 'PPP3CB', 'JRK', 'CDNF', 'SAP30', 'CCK', 'PDIK1L', 'MPP7', 'OR4L1', 'PAG1', 'SLC7A6OS', 'FMNL1', 'SAP30BP', 'STARD5', 'PNPLA7', 'PNLDC1', 'CYP2S1', 'LOC113230', 'DBR1', 'ZNF562', 'TMF1', 'HMGN2P46', 'HIST2H2BA', 'CIDEB', 'FAM58BP', 'LOC284441', 'CCDC150', 'SNAPC1', 'P2RY13', 'PALM2-AKAP2', 'TSSC2', 'KIAA1324L', 'TM9SF2', 'CHRNA3', 'AES', 'ZMYM4', 'COL19A1', 'NECAB1', 'LEPR', 'TCP11L2', 'LRRTM1', 'C10ORF131', 'HEPHL1', 'RTP5', 'CEACAM22P', 'LCN15', 'SPATA41', 'EFEMP1', 'GOLGA7', 'MCTS2P', 'S100A7L2', 'BASP1', 'FABP3', 'FOXD1', 'MTG1', 'SOBP', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.9336299595279511 Spearman Correlation: 0.9113818203619511 Coefficient of Determination: 0.8715938340203349 RMSE: 0.12869224361232845 NRMSE: 0.0632052667414805 MAPE: 875.5030312333774 Pearson Correlation: -0.008353228911423701 Spearman Correlation: 0.015626149485852975 Coefficient of Determination: -997.55111146076 RMSE: 13.180035075593306 NRMSE: 4.928682039374495 MAPE: 14938.781913526273 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: RandomForests Pearson Correlation: 0.5910517757036677 Spearman Correlation: 0.5175768188723572 Coefficient of Determination: 0.1797189864107257 RMSE: 0.3252675681538648 NRMSE: 0.1597502913186311 MAPE: 628.6773596359567 Pearson Correlation: 0.11823203034165486 Spearman Correlation: 0.1701943542867871 Coefficient of Determination: -0.0012319915762135647 RMSE: 0.4173484214953725 NRMSE: 0.15606769309701118 MAPE: 1302.8736219012735 Protein: CDH3 x_train_column_count: 75 x_train columns: ['DEK', 'NCSTN', 'PTGFRN', 'ARID5A', 'C11ORF54', 'ERP44', 'C10ORF95', 'NCK1', 'COL4A4', 'FIG4', 'PGBD2', 'ZBTB9', 'MYL9', 'OR4N5', 'SMPDL3A', 'MPP3', 'NRG4', 'ARHGEF10L', 'KRT24', 'ABCA11P', 'EVPL', 'KRTAP19-7', 'ZNF443', 'PRIMPOL', 'CHERP', 'TNFRSF11B', 'SH2D5', 'OR8G2', 'FGF21', 'TMEM155', 'FUT9', 'CTSS', 'ABCF1', 'SESN2', 'EEF2K', 'JAK3', 'LOC728323', 'TMEM194B', 'MYH9', 'ATP6V1C2', 'ITGA4', 'LOC646813', 'ZC3H11A', 'DCTN2', 'DIAPH3', 'HPN-AS1', 'DYTN', 'GLTSCR1L', 'OR5B17', 'ISLR2', 'IQCF3', 'MMGT1', 'KRTAP5-7', 'FRMPD1', 'EMP2', 'CELSR3', 'TCTEX1D1', 'NCAPH2', 'MTX1', 'COQ9', 'KLF2', 'GPR27', 'DDX11L2', 'PRRT4', 'FRA10AC1', 'LINC00202-1', 'CCR2', 'ADRA1D', 'CRHR1', 'MTMR8', 'CHRNB1', 'FBLN7', 'OR2T33', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.5437023159712256 Spearman Correlation: 0.5302649016331722 Coefficient of Determination: 0.2956122059492273 RMSE: 0.17101785083662893 NRMSE: 0.11998221560632327 MAPE: 651.4116190339645 Pearson Correlation: 0.4629603599113014 Spearman Correlation: 0.43547924537712446 Coefficient of Determination: 0.14822300577771086 RMSE: 0.20617255211791247 NRMSE: 0.186010837447029 MAPE: 280.4641053766576 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: RandomForests Pearson Correlation: 0.540428375476059 Spearman Correlation: 0.5421829600400734 Coefficient of Determination: 0.23601754399655406 RMSE: 0.17810545710923772 NRMSE: 0.12495471818294167 MAPE: 405.7129323526431 Pearson Correlation: 0.4270866747572358 Spearman Correlation: 0.43402785570892416 Coefficient of Determination: 0.15253113520323036 RMSE: 0.20565049998210788 NRMSE: 0.18553983704481986 MAPE: 132.24651062832817 Protein: PTEN x_train_column_count: 886 x_train columns: ['MYCT1', 'CACNG6', 'ERCC1', 'UNC13D', 'LOC91450', 'WBSCR27', 'AADAC', 'EGFL8', 'ACBD4', 'LGALS12', 'EHF', 'ZNF155', 'KCNK16', 'CARD9', 'ATP5SL', 'PCDH20', 'OR51D1', 'KDELR2', 'LIPF', 'PIWIL4', 'ZRANB3', 'BAHD1', 'GRIK1', 'RINL', 'JADE3', 'IER2', 'SNORD116-3', 'FZD5', 'GNG7', 'TCEANC', 'KRTAP23-1', 'OR4C46', 'CLDN11', 'TMEM63C', 'PLK4', 'RAB34', 'TSG1', 'MPP5', 'NOX3', 'TNIP1', 'VCPIP1', 'RALBP1', 'IMP3', 'SYNDIG1', 'PRCC', 'PDHB', 'KPNA6', 'GOLGA7', 'SLC25A3P1', 'SUN5', 'R3HDML', 'HK2', 'PHF6', 'PIP4K2A', 'CROCCP2', 'SLC6A9', 'LINC00032', 'XPO6', 'FAM161B', 'HSBP1', 'ZNF676', 'SENP8', 'POLR3B', 'RFNG', 'GALNT13', 'MSX2P1', 'DMBT1', 'FAM98C', 'ADGRG3', 'CYP21A2', 'RP2', 'UNC5CL', 'YIPF5', 'SCGB1B2P', 'PADI1', 'TCAIM', 'RLN1', 'PGAP2', 'DGKD', 'SMAD6', 'CHIC1', 'TCEAL3', 'ST6GALNAC5', 'ISM1', 'PTBP3', 'PCDHGA2', 'CORO6', 'IER5', 'CENPP', 'KRT32', 'ZNF791', 'FER1L5', 'SMCR5', 'RPS2P32', 'GID8', 'ZDHHC13', 'GTPBP1', 'AARD', 'PCDHA4', 'SPRR2C', 'ZNF581', 'TMEM263', 'SPPL2A', 'SNAR-H', 'CARNS1', 'ARMT1', 'CAB39L', 'FAM179B', 'WNK1', 'XRCC4', 'PRR35', 'SH2D1B', 'LMOD3', 'REXO2', 'MRPL3', 'SIRT7', 'TTLL11', 'PRMT5', 'SLC8A3', 'XKR6', 'BCL2', 'PAX1', 'MMP1', 'GPIHBP1', 'DACT1', 'SYNRG', 'FOXM1', 'G6PC2', 'IQGAP3', 'GDPD5', 'DDC', 'MYO15A', 'MIA2', 'TMEM136', 'MPDZ', 'SLC6A1', 'COG3', 'LINC01591', 'ADGRF5', 'NKG7', 'ERGIC2', 'COX11', 'COX7B', 'SNORD114-20', 'PTGS2', 'SCCPDH', 'ST8SIA2', 'FAM162B', 'SMIM15', 'HS3ST1', 'ZBED2', 'TMEM59L', 'PRKCE', 'TMEM219', 'LOC645166', 'PDE3B', 'JAKMIP3', 'MIB1', 'RAB11FIP2', 'LAT2', 'DPH3', 'ZNF835', 'GPR19', 'SNX29', 'ZNF883', 'ESCO2', 'MRPS23', 'FFAR2', 'EEF2', 'ZDHHC17', 'SLCO6A1', 'IDH3A', 'GNB1', 'SEC63', 'ARFGAP1', 'VN1R4', 'WARS', 'SRSF8', 'CTSO', 'SLC32A1', 'SQRDL', 'TAF9', 'LINC00667', 'STARD3NL', 'CTDSP2', 'RPUSD4', 'TUBG2', 'LOC728392', 'ACPP', 'CACNG1', 'PSMA8', 'CDK5RAP3', 'GBA2', 'VPS51', 'XG', 'KLHL24', 'WDR60', 'SKAP1', 'DOCK2', 'MIR17HG', 'TMEM179', 'SNORD116-23', 'TBC1D3H', 'C9ORF64', 'C9ORF153', 'MAZ', 'NEU2', 'NT5C1A', 'FAM69B', 'ARMCX5', 'IL2', 'ZNF774', 'PDZD7', 'MS4A8', 'CEP290', 'ATXN7L3', 'IFI44L', 'MUL1', 'CCSER2', 'RUVBL1', 'CDH24', 'ZCCHC13', 'CRLF2', 'RHOBTB2', 'SLCO4A1', 'CSPG4', 'DYNC1LI1', 'TTTY17A', 'CPPED1', 'PRDX3', 'MORC1', 'TMCC3', 'GPR89A', 'C20ORF85', 'KDM3A', 'EXPH5', 'DNM3', 'MED1', 'TMEM156', 'KRT72', 'GSTZ1', 'HSFY1P1', 'C17ORF98', 'PEX11A', 'HLX', 'CIB1', 'LOC613037', 'TTC33', 'SPATA33', 'ZNF184', 'ARL14', 'LINC00298', 'EFHC2', 'PCDHB19P', 'OR10A4', 'POU4F1', 'FAM35A', 'DDX17', 'SLC25A20', 'AKNAD1', 'PPP1R1A', 'NELL2', 'VPS35', 'FBXO44', 'COX4I2', 'RPAIN', 'SLIRP', 'DNAJC1', 'STRADA', 'KCNQ3', 'BBC3', 'TFIP11', 'CLNS1A', 'ZNF514', 'MATR3', 'NHS', 'LINC00893', 'B4GALT7', 'PNISR', 'RBP3', 'MMAA', 'POC1B', 'HABP2', 'MGAM2', 'PVRL3', 'TFAMP1', 'SPNS2', 'DUSP4', 'PTDSS2', 'C1ORF95', 'SNF8', 'MOCS3', 'POLR2J', 'CCNB2', 'COA3', 'GIMAP4', 'SPAG4', 'BAK1', 'PAPOLG', 'TRAPPC2', 'GPR132', 'RCN3', 'ERLIN2', 'IQCJ', 'ISOC2', 'FDXR', 'RNF213', 'DCAF4L2', 'SMG1P3', 'MYBL2', 'WNK3', 'MB21D1', 'TRIM74', 'PLAA', 'PRL', 'FOXI1', 'GJB1', 'PIK3CD', 'TBCEL', 'C10ORF10', 'GALNT8', 'TTC31', 'RDH8', 'MEF2C', 'BAG3', 'SYT13', 'TMPRSS11D', 'MARCKSL1', 'C9ORF116', 'TCHH', 'MRPL21', 'TRAPPC1', 'ABCC10', 'MAGEA3', 'SNORD102', 'SPOP', 'BAG4', 'ZNF131', 'CARS', 'SPATA32', 'LINC01465', 'PCDH10', 'MEIS3P1', 'PTCD3', 'SCAND1', 'LOC202181', 'TCIRG1', 'ADRBK2', 'RSPRY1', 'PIK3R5', 'MGAT1', 'C3ORF79', 'TSC2', 'IZUMO4', 'OR2T2', 'SYCE1', 'ZNF772', 'TP63', 'NOC4L', 'GLRA4', 'SFRP4', 'F13B', 'GSTA5', 'NLN', 'IQUB', 'WARS2', 'OR4E2', 'IMP4', 'SNAR-A2', 'STXBP1', 'NUDT4', 'LURAP1', 'MDH2', 'FIBP', 'CCNT1', 'FGFBP2', 'APPBP2', 'NDNL2', 'FASTKD1', 'RAB4B', 'ZNF816', 'PITX3', 'CHRNB1', 'MYLK', 'SESN3', 'PIP5K1B', 'ASH2L', 'PLOD1', 'ARHGEF25', 'PCBD1', 'VTN', 'SEC13', 'TRIM53AP', 'GKN2', 'NPW', 'YEATS4', 'PPM1E', 'SULT1A1', 'DUX4L6', 'OSR2', 'INPP5E', 'CCDC13', 'FAM3C', 'CHRNA10', 'ECEL1', 'TMEM14E', 'TYRP1', 'CRP', 'SUOX', 'CHID1', 'TNC', 'NINL', 'RHBDD2', 'ARL6IP5', 'CATSPERB', 'C16ORF71', 'RBFA', 'MMADHC', 'CCDC102A', 'MMGT1', 'MYT1', 'REC114', 'TTTY17B', 'SLC25A51', 'WDR27', 'DNAJB14', 'GAS2L1P2', 'SNORA53', 'TMIGD1', 'EXOSC8', 'SSR1', 'TMEM126B', 'ILKAP', 'CDHR5', 'ISCA2', 'TLR1', 'RAB24', 'OR6W1P', 'YARS2', 'XRCC2', 'KRT10', 'CARD11', 'PSMA4', 'DNAJC5G', 'C11ORF86', 'MFSD12', 'KDF1', 'TIMM22', 'TMPRSS9', 'TBL2', 'MNX1', 'CDC34', 'NUDCD2', 'OR10K1', 'QSOX2', 'RASSF7', 'AADACP1', 'GPC5', 'NUDT5', 'GMPR', 'CCDC153', 'ASIC5', 'EPB41L4A-AS2', 'ACER2', 'GCG', 'MAGEB3', 'MIR100HG', 'PKIA', 'TMEM92', 'GOT2', 'AFAP1', 'UBASH3B', 'LAMA1', 'PRR15L', 'JMY', 'FAM65A', 'TMEM170A', 'ZNF70', 'RPF2', 'ATP5L', 'DUSP7', 'TMPRSS6', 'OR2T3', 'SLC4A4', 'ST13', 'TPPP3', 'ZNF718', 'C8ORF74', 'B3GALNT1', 'OSTF1', 'ABI1', 'ACOX3', 'CEP44', 'GPD1', 'ZNF517', 'CGRRF1', 'ATP1A1', 'DUSP5P1', 'SNORD67', 'TCF4', 'CT47A9', 'RUNX1', 'FAM171A2', 'HIST1H2AB', 'TMEM79', 'ROCK1', 'GTDC1', 'CD248', 'CENPO', 'NPR1', 'VPS72', 'DYNAP', 'COA7', 'TNFAIP2', 'ZBTB47', 'IKZF1', 'MRAS', 'FANCL', 'MRGPRF', 'TMX1', 'POMK', 'SNORD115-39', 'PRTG', 'OTOR', 'SEPHS1P1', 'KRT73', 'CSDE1', 'UBN1', 'TSPY2', 'EVI2B', 'ERAS', 'PMS2P5', 'SNORD82', 'RFXAP', 'BSN', 'ATXN1L', 'DDIT3', 'MUS81', 'GTF2H1', 'BNIP2', 'BTN1A1', 'COG6', 'LOXL1', 'LINC00696', 'C1ORF204', 'ATP1A1-AS1', 'ATHL1', 'LYRM4', 'ECE1', 'TUBB4B', 'PTTG1IP', 'LIN52', 'NUTM2A-AS1', 'ZWINT', 'AUNIP', 'SPRED1', 'METRNL', 'GPD1L', 'BMS1P20', 'GYS2', 'GSTA2', 'ZSWIM2', 'YBEY', 'SLAMF7', 'GDA', 'TRIAP1', 'TOMM22', 'MYH10', 'CWC25', 'SNORD113-9', 'ANAPC1', 'IL23A', 'MORN5', 'GAGE2D', 'OR4F21', 'TUBA1C', 'FAM133CP', 'CST1', 'ADCY10', 'AZIN2', 'OR6B3', 'RAB5B', 'OPALIN', 'HTR2A', 'DCTN5', 'C1QTNF4', 'HAMP', 'FIGNL1', 'WDR36', 'SLC2A10', 'FRMPD1', 'NHLRC1', 'IQCC', 'ATXN2L', 'SC5D', 'LANCL1', 'CELA2A', 'RPA4', 'LBH', 'CAPRIN1', 'UGT2B10', 'LDB1', 'EPHA7', 'ZMYM5', 'HNF1B', 'ISLR', 'ENTHD2', 'DPP7', 'C1ORF140', 'GTF3C2', 'TP73-AS1', 'FADD', 'ACSM3', 'OR2AE1', 'NT5DC2', 'TNFAIP3', 'DCLK1', 'SLX1B', 'TMEM161A', 'GALNT11', 'PSG7', 'ADAMTS19', 'MAK16', 'KLHDC1', 'FGF12', 'TREML3P', 'ACOT7', 'SPAG11A', 'TDRD3', 'ZNF398', 'KRTAP4-4', 'SP5', 'ZNF286A', 'SLC26A1', 'OR1S2', 'TAAR6', 'LILRA2', 'REM1', 'CDR2L', 'SERTM1', 'C11ORF49', 'TMEM223', 'FER', 'SNORD46', 'TCTA', 'NIPSNAP3A', 'PPIL1', 'HLA-DQB1', 'CD320', 'C14ORF37', 'CDKAL1', 'SHKBP1', 'LBHD1', 'DNM1L', 'LRRC74A', 'FAM110C', 'ALG9', 'SUGP2', 'CFAP52', 'INO80B', 'CHKB', 'SFT2D2', 'TEX2', 'DEFB113', 'ST6GALNAC1', 'BTBD1', 'FRY', 'OR52B6', 'EXOSC5', 'MSTN', 'ULBP2', 'PAF1', 'ANKRD30BL', 'HSP90AB1', 'PSG5', 'C14ORF177', 'MCPH1', 'COX7A2', 'C5ORF24', 'RPN2', 'THSD1', 'ZSCAN4', 'TUBA3E', 'NTRK1', 'KLHL12', 'RNF168', 'LECT2', 'DDX10', 'HTR1A', 'LOC100128573', 'ENPP5', 'TM9SF3', 'TAC4', 'CANX', 'PKIG', 'SRP68', 'CCBL1', 'VIM', 'C8ORF76', 'GBA3', 'TMEM39A', 'TMEM150C', 'INTS4', 'PADI3', 'TIMM17A', 'EEF1E1', 'BMP5', 'ACOT2', 'UBXN1', 'COASY', 'GAGE12F', 'CCT4', 'ACTG2', 'PPP3CB', 'KIAA1045', 'CLDN23', 'DLGAP2', 'LOC644936', 'ASB1', 'SH3BGRL3', 'SNORA70B', 'SLC22A5', 'C21ORF58', 'ZBTB1', 'PXYLP1', 'CDK8', 'MAGEA2', 'USPL1', 'CENPC', 'HIST1H2BF', 'ATP5O', 'RAX', 'CFAP44', 'PWAR5', 'TAF7', 'ANKRD31', 'SEMG2', 'ADAM15', 'LMNTD2', 'HIST1H3C', 'RNF41', 'ARL6IP4', 'HOXA5', 'CLEC16A', 'KIF18A', 'HBD', 'SAP30BP', 'FAM103A1', 'MRPL36', 'FAM8A1', 'ZNF236', 'NUDT7', 'CTXN2', 'PRAMEF10', 'PTK2B', 'CRYM-AS1', 'ATP11A', 'SNORD33', 'SLC25A24', 'STAM2', 'ZRANB2', 'SEBOX', 'HDHD2', 'COL7A1', 'TMED10', 'ZG16B', 'CELF1', 'PRSS38', 'GSAP', 'DDX26B', 'KRT8P41', 'LAP3', 'PTMA', 'BGN', 'APLNR', 'FOXH1', 'CLK1', 'INPP5F', 'NCS1', 'ZNF704', 'SETDB2', 'BHLHE40', 'SUPT4H1', 'C8A', 'SPDYA', 'WDR44', 'PMP22', 'GAS2L1', 'RAB8A', 'MTERF4', 'BTN3A3', 'ACSS3', 'BCRP3', 'PRELP', 'STUB1', 'C1ORF52', 'FAM26D', 'SLC9A7', 'SMAD1', 'CLEC3A', 'PFN1P2', 'KATNBL1', 'C9ORF91', 'GPR82', 'RASL11B', 'NUDT19', 'TMEM86B', 'CHD2', 'CYP2A6', 'WDR49', 'UBAC1', 'PSMB5', 'PAEP', 'MARCH11', 'MDK', 'CLEC1B', 'PRKCH', 'HYKK', 'PRDX5', 'TSC22D3', 'TMEM53', 'ZMYND8', 'INPP5B', 'ZNF512', 'NRSN1', 'ME2', 'PLP1', 'SKOR1', 'C4ORF32', 'TTC39C', 'SCARNA8', 'PCDHGA12', 'WFDC8', 'SF3B5', 'CDK12', 'MCM7', 'STAP2', 'PSMA5', 'ADPGK', 'BEST1', 'NUCB2', 'CUX2', 'POGK', 'GLT8D2', 'PHLDB1', 'LRRN4CL', 'SPAM1', 'SUSD1', 'TCTN2', 'C20ORF203', 'SPAG8', 'PTGFRN', 'NFS1', 'ALOXE3', 'LOC400043', 'GRAMD2', 'SYN1', 'HGC6.3', 'OR4C45', 'ZNF582', 'CHAC1', 'FAM169B', 'SNORD115-16', 'ARFGEF3', 'NAPA', 'THNSL1', 'L3MBTL3', 'PDRG1', 'FANCD2OS', 'ANKRD34A', 'RAET1G', 'PLAG1', 'RARB', 'FAM46C', 'KLF4', 'HSD17B1', 'ADIRF', 'KRTAP19-5', 'PDSS1', 'GLYCTK', 'ZNF771', 'RPL27A', 'NOP14-AS1', 'CHST2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.8220072517645055e-15 NRMSE: 4.412488862113213e-16 MAPE: 4.110503368956365e-12 Pearson Correlation: 0.19820047085961368 Spearman Correlation: 0.2485691841544159 Coefficient of Determination: -1.1980627083119337 RMSE: 1.0699893985704245 NRMSE: 0.20697721266063612 MAPE: 1800.8835561296041 Predictor: ElasticNet Pearson Correlation: 0.41500637342855484 Spearman Correlation: 0.40978390143961535 Coefficient of Determination: 0.05389771702168389 RMSE: 0.5534805430384835 NRMSE: 0.08654218482346704 MAPE: 322.8322824306388 Pearson Correlation: 0.30556628952245946 Spearman Correlation: 0.3632738562824973 Coefficient of Determination: 0.025277786554966153 RMSE: 0.7125246071886084 NRMSE: 0.13782973676659865 MAPE: 422.08973238614294 Predictor: RandomForests Pearson Correlation: 0.5821998032570118 Spearman Correlation: 0.5555754695039973 Coefficient of Determination: 0.29541445576872194 RMSE: 0.47763943667449604 NRMSE: 0.0746836739386281 MAPE: 258.63270297689553 Pearson Correlation: 0.3796139375648535 Spearman Correlation: 0.43403696070190095 Coefficient of Determination: 0.13076743931439616 RMSE: 0.6728642102757946 NRMSE: 0.1301578865436 MAPE: 400.83720543043506 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['CDCA7', 'PTGR2', 'CNNM1', 'GLRA3', 'KRTAP10-11', 'DIRC2', 'GPR17', 'OR4D6', 'FARSB', 'CEACAM6', 'SEPSECS', 'ANKRD36', 'NELL2', 'BAP1', 'COL6A4P1', 'OR6S1', 'HNRNPCL3', 'CELA3A', 'DEFB131', 'TRAPPC9', 'SULT4A1', 'SRBD1', 'GPR158-AS1', 'YY1AP1', 'UGT1A10', 'YPEL2', 'MAP4', 'LOR', 'NAB2', 'RAF1', 'ANKFN1', 'TBC1D3', 'PELO', 'ARHGEF18', 'KRTAP5-4', 'TMLHE', 'GRAMD1A', 'PIN1P1', 'MAD2L1', 'MARK2', 'MCUR1', 'PPBPP2', 'IRF7', 'PHAX', 'SLC8A2', 'ASH1L', 'MARCH1', 'SUV420H1', 'ZNF519', 'EHD1', 'CCDC124', 'BSPH1', 'ITGAV', 'SLC6A17', 'RRM1', 'ZNF134', 'MXRA8', 'NME8', 'HCG18', 'DDX21', 'DAB2', 'SCUBE2', 'CALCOCO2', 'C16ORF71', 'KIR3DL2', 'PPWD1', 'GNAT3', 'SLC25A32', 'FATE1', 'WNT11', 'MANSC1', 'CRHR2', 'NDUFS5', 'BCAS1', 'HSD17B4', 'SAFB2', 'CCDC91', 'PUM1', 'BRINP1', 'IFNLR1', 'CD8A', 'C12ORF76', 'DNHD1', 'KATNBL1', 'ZFYVE27', 'ZNF512', 'IL5RA', 'C3ORF14', 'ALPI', 'WNT5B', 'TAPBPL', 'SULT1A3', 'KIF26B', 'GK2', 'ZSCAN12', 'CYP2F1', 'STX10', 'ARPC1B', 'DGCR5', 'HERC1', 'GNA15', 'S100A1', 'HMGA2', 'GSS', 'ATF7IP2', 'SFXN2', 'SRSF7', 'SKIL', 'ZDHHC2', 'LMF2', 'OACYLP', 'NUPR1', 'MRPS2', 'DNAI2', 'NSMCE4A', 'CTSH', 'ADCY5', 'ABCB6', 'BACE1', 'C2ORF69', 'PEAK1', 'WNT4', 'ASB13', 'FASTKD5', 'ABCC10', 'ZNRF2', 'CISD1', 'SPRYD4', 'PRKAR2A', 'LDLRAP1', 'LAMTOR4', 'ITGA3', 'MIR4697HG', 'LRRC57', 'TMED7', 'NOTUM', 'TMEM102', 'FTHL17', 'PDZK1IP1', 'ADAP2', 'ST7-AS2', 'NXPE2', 'ANP32AP1', 'MTDH', 'HSPB1P1', 'NMUR1', 'ZNF678', 'TVP23C', 'METTL15', 'CREBBP', 'ACTRT1', 'YLPM1', 'IL23R', 'C14ORF28', 'DAPK2', 'BTC', 'FSCN1', 'LPPR5', 'FAM53A', 'CYLD', 'EIF2D', 'MAP1LC3C', 'ERLEC1', 'KIF1BP', 'KIF21B', 'MRPS11', 'DLEC1', 'GSTK1', 'LRRC75A-AS1', 'TACO1', 'RLTPR', 'MAGI2', 'RHEBL1', 'ITGB5', 'C8ORF74', 'ITPRIPL2', 'NOL4', 'MYO1H', 'AFAP1L1', 'UBR5', 'IDI2', 'FBXO4', 'AASDH', 'AADACP1', 'C1ORF146', 'MARCH11', 'LINC00240', 'MFAP4', 'FGD5', 'MMAB', 'GPR62', 'ITPRIP', 'BRS3', 'NELL1', 'PNPLA5', 'ZNF267', 'FAM192A', 'C9ORF171', 'HSPBAP1', 'TSN', 'TBC1D16', 'PCDHA10', 'LETM1', 'DPYS', 'XKR3', 'TTC21A', 'KRT33A', 'PLVAP', 'MYO9A', 'BAGE2', 'SNORD116-8', 'RBBP7', 'NTSR1', 'OR51M1', 'TCHP', 'IFNAR2', 'UBE2Q2P2', 'HIST2H3C', 'RPRD2', 'TBL1X', 'TAS2R3', 'ZNF792', 'HIST1H2AK', 'GNB5', 'SNORD116-11', 'PACSIN2', 'YWHAEP7', 'LINC00523', 'ANP32E', 'LL22NC03-63E9.3', 'SOD2', 'TOR1AIP2', 'LSM5', 'ZNF704', 'ATOH7', 'ZNF45', 'MST1R', 'NNAT', 'RNF34', 'SNORD35B', 'SNORD2', 'VPRBP', 'DDA1', 'PSORS1C2', 'CX3CL1', 'THUMPD3-AS1', 'OCM', 'SUPV3L1', 'IFNA5', 'CLPTM1', 'C3ORF35', 'LINC00654', 'PRDX2', 'ZNF836', 'GSTCD', 'SLC37A1', 'CEP250', 'HTR3E', 'CELA1', 'CCT2', 'DCT', 'FAM157A', 'UGT3A1', 'L2HGDH', 'SLC36A1', 'ACBD6', 'DNAJB5', 'KIAA1324L', 'PDE6G', 'DHODH', 'UPK1B', 'APOBEC4', 'MRPS14', 'CBR3', 'LOC256880', 'TMEM155', 'ATAD5', 'MTX2', 'RBM33', 'CTNNBIP1', 'POLR3F', 'SUSD3', 'PAGE5', 'CEP83-AS1', 'RHBDD3', 'PCSK2', 'ZDHHC12', 'FOXE1', 'PSMA4', 'LCOR', 'ZMYND11', 'CCDC37', 'GNAL', 'ERP29', 'OBFC1', 'NCAPG', 'SNORD114-29', 'TPH2', 'CAPN9', 'MEGF6', 'UNC5CL', 'CLPX', 'CXORF36', 'SLC6A11', 'GCA', 'CYTH2', 'ZNF540', 'SNHG7', 'HOOK2', 'GFER', 'RNF151', 'PGPEP1', 'CATSPERB', 'FAT1', 'CHRNA4', 'FBLL1', 'SRMS', 'POMT2', 'CARD16', 'DSN1', 'POU2F1', 'C12ORF45', 'SLC35D1', 'USP3', 'EIF5AL1', 'GINS1', 'POU6F1', 'ATP6V1G2', 'OSGIN1', 'KLHL34', 'COQ4', 'COBL', 'EEF1E1', 'SERPINB1', 'SOHLH2', 'EIF3D', 'ETFB', 'TM4SF4', 'ATP6V1C1', 'CSF2', 'TIPARP', 'PLAG1', 'SLX1B', 'MBLAC2', 'C11ORF74', 'KLK14', 'CYP2D7', 'GRHL1', 'SLC13A3', 'EPX', 'S100A7L2', 'MAGT1', 'ARHGAP21', 'RECQL', 'BNIP3', 'ZNF223', 'SNX12', 'FKRP', 'TCEANC', 'ZC4H2', 'ALG1L2', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.8458094741230286 Spearman Correlation: 0.8324385881672681 Coefficient of Determination: 0.7153936656441249 RMSE: 0.10694679487247864 NRMSE: 0.06889791906746894 MAPE: 325.39894673814564 Pearson Correlation: 0.16440196458623904 Spearman Correlation: 0.13387947480641904 Coefficient of Determination: -5.0978949545925065 RMSE: 0.41013521519749563 NRMSE: 0.5363698622866614 MAPE: 839.3769444240016 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: RandomForests Pearson Correlation: 0.6005599474639998 Spearman Correlation: 0.5404063654738573 Coefficient of Determination: 0.19445515833463456 RMSE: 0.17992452017698649 NRMSE: 0.11591207613270188 MAPE: 147.86710627694083 Pearson Correlation: 0.17562610925851407 Spearman Correlation: 0.14893203157146598 Coefficient of Determination: -0.03920564650306835 RMSE: 0.1693120390434132 NRMSE: 0.22142423205834458 MAPE: 147.84060755894433 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['MMP12', 'ZHX3', 'CHP2', 'IRS1', 'FAM195A', 'UBXN2A', 'IL7R', 'ACOX2', 'PLAU', 'LRRC36', 'RBM22', 'IPO5', 'AGO2', 'KRT13', 'POLR3A', 'SGCD', 'MRPL17', 'SENP3', 'ZNF676', 'PRPS1L1', 'WDR49', 'SMC2', 'IQUB', 'CD1D', 'RPP38', 'SNORD115-4', 'SLC4A3', 'ECE2', 'APOA2', 'DDA1', 'CARD17', 'TMEM132C', 'PAGE5', 'TMEM201', 'MROH8', 'ZNF337', 'DST', 'TXNDC5', 'FGF2', 'FBXO48', 'WDR93', 'CAPZB', 'C11ORF95', 'ZNF503-AS2', 'CD40LG', 'MCM5', 'ASH2L', 'AFAP1-AS1', 'PEX11B', 'SCN3B', 'SH3BP1', 'LY86', 'RNF115', 'ZDHHC5', 'ARHGEF25', 'SYT16', 'STYXL1', 'OLFML3', 'KLHDC7A', 'NKX1-2', 'CHST7', 'NDUFS5', 'GTF2F1', 'HSFX2', 'ZFHX4', 'RAMP3', 'UBE2Z', 'USP32', 'RBCK1', 'PPP1R14C', 'PRAMEF4', 'LOC341056', 'KRTAP5-5', 'WSCD1', 'KRTAP6-3', 'NUP50', 'C2ORF78', 'CCDC74B', 'FAM215A', 'EBF1', 'CASC3', 'COL26A1', 'OR10W1', 'FAM41C', 'THNSL1', 'NUP107', 'REC114', 'GXYLT1', 'PRICKLE2', 'PIP4K2B', 'VSTM2B', 'DLEU2L', 'ASAH1', 'CEBPG', 'UQCRC1', 'TAF15', 'TMEM80', 'NPM1', 'ADTRP', 'BOLA3', 'CSMD1', 'TUBA4A', 'UPF2', 'KRTAP21-1', 'FMNL2', 'SNX21', 'TMEM87B', 'NANOS3', 'ASB6', 'HMGCS1', 'SAC3D1', 'C7ORF25', 'UIMC1', 'MFSD9', 'SPAG17', 'PPAP2B', 'PFKFB3', 'SNORD32B', 'SNORD111', 'FMO3', 'EDEM3', 'LRSAM1', 'PASD1', 'ACTRT2', 'IAH1', 'PRR18', 'ADAMTS16', 'CXCL11', 'ZNF620', 'GATA4', 'RIN1', 'OR51F2', 'CENPV', 'IPO7', 'NDUFB10', 'EFHD2', 'ZNF205', 'PATL1', 'EN1', 'PRR26', 'ZFHX3', 'FAM69C', 'KRTAP21-2', 'AGL', 'C19ORF48', 'ELMSAN1', 'PPP2R4', 'TNR', 'C8ORF48', 'HMP19', 'FAM9B', 'KRTAP10-7', 'DDX12P', 'CHST4', 'FAM162B', 'C1QTNF1', 'RNF135', 'GOLGA7', 'ZNF33A', 'GLMN', 'OR3A1', 'ODF2', 'FCGR1C', 'TMEM71', 'CPSF7', 'SCGB1C1', 'CA9', 'ITGA11', 'MLEC', 'BRD2', 'CREG1', 'ESAM', 'KCNMB2', 'S100G', 'CDCA8', 'MOB1A', 'SAMD12', 'LOC344967', 'VPS28', 'SPINT1', 'IFNA2', 'LRRTM3', 'MSRB1', 'OAZ3', 'SLC17A2', 'NANOS1', 'PRAMEF14', 'OTUD7A', 'TMEM44', 'ASCC1', 'RFX2', 'BRDTP1', 'STK33', 'KIAA0408', 'SPANXN1', 'SNHG9', 'RPL31P11', 'CWC27', 'AGO1', 'EFCAB12', 'RRAGC', 'PSG2', 'NKX2-4', 'ASAH2B', 'SRA1', 'CCDC53', 'GTPBP10', 'ATP5H', 'SNORD114-10', 'APH1B', 'CD48', 'TUFM', 'SNORD59B', 'SP100', 'SLC39A2', 'CD27-AS1', 'SLC37A3', 'CEACAM21', 'TMEM99', 'CEBPB', 'PCDHB17P', 'AQP7P1', 'DSEL', 'C14ORF1', 'RPS2P32', 'MROH6', 'GAPDHS', 'MYH9', 'GMPR', 'SIDT1', 'PLEKHF1', 'ZGLP1', 'FAM213A', 'ST6GAL1', 'NFKB2', 'ITPRIPL2', 'SNORD115-5', 'OR52E8', 'HNRNPUL2', 'PCNT', 'DEFB135', 'FAM71E1', 'TAF1', 'GMCL1', 'ASL', 'SERP1', 'TIGD2', 'MAGEC1', 'DEFB132', 'DCUN1D2', 'ARAF', 'OPN1SW', 'RANBP3', 'PDE1C', 'CCDC144B', 'PDS5A', 'PAM', 'PALLD', 'SRF', 'FANCM', 'CILP', 'CCDC59', 'EDRF1', 'CSN1S1', 'SLC1A3', 'WNT1', 'GJA5', 'HERC5', 'FCHO1', 'MTMR7', 'GOLGA8B', 'NXPE1', 'AMELX', 'CHIC1', 'LRRC4C', 'BHLHA15', 'LINC00634', 'DCAF13', 'HSPA13', 'PRRC2B', 'UBTD2', 'SYNGR1', 'VPS53', 'DPH2', 'KIAA1324L', 'PQLC3', 'SNORA53', 'FXYD5', 'TMEM175', 'TCTN2', 'RILP', 'SNX13', 'FAM206A', 'SRFBP1', 'WFIKKN1', 'SLC6A12', 'GNRH2', 'PLG', 'KRT35', 'RPS4Y1', 'TENM3', 'PGC', 'SNORA26', 'SERPINB12', 'MUC1', 'CCDC25', 'CALHM1', 'AASDH', 'DNAH6', 'ZP4', 'VGLL2', 'FGL2', 'SH3GL1', 'GLRX', 'ZNF221', 'SNORD115-37', 'NKD2', 'TULP4', 'OR4Q3', 'CRYGC', 'MME', 'PMS2P4', 'C9ORF85', 'OR2S2', 'TTTY13', 'CACNB2', 'SBF1', 'QTRT1', 'CD109', 'GABPA', 'CFHR3', 'SNORD90', 'QRICH1', 'TMEM180', 'SLC43A2', 'WHAMMP3', 'GATS', 'FAM134C', 'IL27RA', 'OR51V1', 'UBE3C', 'DARS', 'SCG2', 'ZNF20', 'RADIL', 'TMEM139', 'CDC20', 'PPIEL', 'SPIDR', 'DUSP3', 'RASSF1', 'TMEM260', 'COL9A3', 'SUMF1', 'REN', 'MOB3B', 'TBK1', 'MORN2', 'ARFIP2', 'OR51L1', 'CLDN17', 'ZC3H10', 'TCF15', 'USP39', 'SLC2A10', 'HSPA9', 'NMS', 'CADM2', 'CDR2', 'TMEM206', 'BCAS2', 'MYO3B', 'OR1B1', 'HIST1H1B', 'STAM2', 'ZNF320', 'WDYHV1', 'MEIOB', 'TMEM160', 'TANGO6', 'SERGEF', 'EPB41L4A-AS2', 'SLC45A4', 'ENTPD8', 'PP14571', 'CRLS1', 'EPS15', 'PABPC1L2A', 'SFRP2', 'TLR1', 'MIR1-1HG', 'TRAPPC8', 'MFI2', 'LMNA', 'PBX2', 'NXPE2', 'SUCNR1', 'PMS2P1', 'SPATA13', 'SETD6', 'FCGR3A', 'KCNN3', 'USP12', 'KRT36', 'OR2J2', 'RNF207', 'HIST1H3A', 'SEC61B', 'KLRAP1', 'MAPK11', 'LRRC24', 'RPGRIP1L', 'COL4A4', 'FRZB', 'INTU', 'TNNC2', 'LSM3', 'SMPD3', 'PDE7A', 'CRTAP', 'UTP3', 'NBPF7', 'SPECC1L', 'PROSER3', 'CASC10', 'DYX1C1', 'WIBG', 'ARL14', 'EIF2B2', 'ATXN7L2', 'PRDX5', 'MRM1', 'HSPA5', 'PDLIM2', 'SRR', 'RNF24', 'CIZ1', 'TRIML1', 'SCARNA8', 'DPF1', 'SF1', 'HERC1', 'MYEF2', 'GNL3L', 'SLC4A10', 'SNORD117', 'CSTB', 'JUND', 'FAM71D', 'C8ORF74', 'PM20D1', 'CCER1', 'RCN1', 'SIGLEC7', 'HAVCR1', 'PUS10', 'ERAP1', 'PCGF6', 'NKAIN1', 'HGD', 'PCBD2', 'KYNU', 'PPP1R18', 'MYF6', 'MBOAT7', 'PID1', 'NUTM1', 'PRMT2', 'ZNF137P', 'DNAJC1', 'BBS12', 'MYO15B', 'FLI1', 'ATP5E', 'CCDC90B', 'MAPK8IP2', 'SNORA79', 'GFM2', 'LINC00893', 'FAU', 'RHOU', 'CPLX3', 'PSMB4', 'SCG3', 'YIPF1', 'CLK2P1', 'COX20', 'GLI2', 'MS4A4A', 'HAS1', 'SCG5', 'ZMYM2', 'VDAC2', 'ZNF222', 'IL17RB', 'NUCB2', 'GOLGA8EP', 'INO80E', 'GRAMD1A', 'EPB41L4A-AS1', 'SULT6B1', 'SGK3', 'FTLP10', 'DHX33', 'SNORD113-7', 'TTC30B', 'CUX2', 'SYCE1L', 'RGS8', 'MAGEF1', 'ZUFSP', 'RPL39', 'KDSR', 'SLC4A5', 'PRKCG', 'C2ORF83', 'FGFR4', 'HES6', 'PIGZ', 'NASP', 'TRIM49', 'CCDC63', 'IFIH1', 'EIF5', 'TMEM254', 'PLA2G2E', 'LINC00598', 'SLC22A16', 'EPM2AIP1', 'SPARC', 'SNORD115-26', 'LAMB2P1', 'HAVCR2', 'CYSTM1', 'PHB2', 'RHBDD3', 'TTF2', 'MAP3K11', 'ZEB2', 'OR9G4', 'SLC36A2', 'IGFN1', 'DNPH1', 'LRIG1', 'THAP11', 'AEN', 'HIF1A', 'TRA2A', 'MYO1G', 'ZIC4', 'EXOSC8', 'ZSCAN20', 'ATG4B', 'OR52I1', 'RAB9B', 'CEP164', 'C12ORF71', 'ACTR1B', 'SLC20A1', 'NUGGC', 'MUC20', 'SNORD119', 'SNORD116-25', 'HTR1D', 'ELOVL2', 'SORBS1', 'RUSC2', 'TMEM116', 'LILRA4', 'RHOJ', 'TARM1', 'RASD2', 'BOD1', 'TOMM40L', 'CXCR2', 'HELQ', 'CXORF36', 'WEE1', 'SNORA4', 'TMEM25', 'PSMD1', 'DNMBP', 'PCDH7', 'SUSD1', 'TYR', 'B3GALNT2', 'HEPHL1', 'GCNT2', 'LOXL4', 'SH3BP5', 'TTTY20', 'FARP2', 'UBL4B', 'HECW2', 'MPPE1', 'HHATL', 'FES', 'LMAN1', 'TOM1L2', 'GAPT', 'STAG3L3', 'BNIPL', 'GDI1', 'NWD1', 'INHBE', 'DRG2', 'WDR63', 'MIA3', 'MON1B', 'CDH23', 'CD1C', 'KCNAB1', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 5.456958606081729e-15 NRMSE: 1.389564463874546e-15 MAPE: 4.321376125350057e-12 Pearson Correlation: 0.1382479725261115 Spearman Correlation: 0.23551665232733576 Coefficient of Determination: -17.924539013483326 RMSE: 2.6360222457539972 NRMSE: 0.6633004317339768 MAPE: 1926.6652608492386 Predictor: ElasticNet Pearson Correlation: 0.5464055124160967 Spearman Correlation: 0.3892949394778462 Coefficient of Determination: 0.17376585202348827 RMSE: 0.6178183895423179 NRMSE: 0.15732178695279417 MAPE: 196.6708621440933 Pearson Correlation: 0.32989931804324096 Spearman Correlation: 0.24409531290913855 Coefficient of Determination: 0.09129885893498657 RMSE: 0.5776262922102718 NRMSE: 0.14534769940622325 MAPE: 258.79968127246855 Predictor: RandomForests Pearson Correlation: 0.7047513355986945 Spearman Correlation: 0.6437282539643426 Coefficient of Determination: 0.49273763699371154 RMSE: 0.48408940899578323 NRMSE: 0.12326892847031735 MAPE: 191.361048658018 Pearson Correlation: 0.3778708392720772 Spearman Correlation: 0.3360694473368207 Coefficient of Determination: -0.060972295569506674 RMSE: 0.6241492287507694 NRMSE: 0.1570542333486247 MAPE: 495.50960394909805 Protein: TP53 x_train_column_count: 1002 x_train columns: ['MARVELD2', 'OR56B1', 'OR2A7', 'OR1L1', 'MMEL1', 'ABCD3', 'SNX2', 'GRXCR1', 'GABRA6', 'TDRP', 'TRAF2', 'MOV10', 'LOC654342', 'ACAP1', 'IARS', 'AFP', 'FBLIM1', 'LCE2A', 'PRKG1', 'PAIP2B', 'C8B', 'SGK494', 'MRPL19', 'TMTC1', 'MC4R', 'RQCD1', 'PREX2', 'FGF12', 'FRMD6', 'EIF2S2', 'LINC01139', 'DNM2', 'IL13', 'RUVBL1', 'WDR74', 'GLE1', 'HMOX2', 'ANP32E', 'CYLC2', 'RNY4', 'DDX41', 'LRTM2', 'CSAG3', 'STRN3', 'C1ORF146', 'TMEM182', 'SLC40A1', 'TGDS', 'AURKB', 'KLHDC8A', 'TARBP2', 'MLLT4-AS1', 'SLU7', 'SYNGAP1', 'KISS1', 'ITGB2', 'C21ORF2', 'ATP9A', 'CYP26C1', 'TYK2', 'ZNF286B', 'ITFG3', 'TBX3', 'TMEM217', 'CGB', 'CNNM3', 'PTPRT', 'ARGFXP2', 'AGAP7P', 'RPL39', 'SLC27A3', 'LAMP1', 'EFCAB13', 'MXRA7', 'SAP30L', 'C7ORF31', 'SPANXC', 'C20ORF85', 'PDGFRL', 'OR2J3', 'FITM1', 'MBD3L1', 'KLHL22', 'JAK2', 'LRP5L', 'DUSP9', 'PAH', 'NPR3', 'SFMBT1', 'POU4F3', 'THSD7A', 'IL13RA1', 'TRAPPC9', 'LAMA3', 'MAPK12', 'FAM183CP', 'AKAP9', 'SPATA31A5', 'OR4F29', 'TCEB1', 'CDK11A', 'NLRP7', 'RETSAT', 'CCDC120', 'CCDC157', 'LINC00930', 'NKX2-2', 'TBC1D31', 'DOC2B', 'UTP11L', 'C17ORF74', 'ZACN', 'GTF3C3', 'WWP2', 'COMMD3', 'IRF2BP2', 'TATDN2', 'IQSEC3', 'NFKBIB', 'MCTS1', 'CREBBP', 'MASTL', 'NCF1', 'NOC3L', 'GPR108', 'TBC1D3B', 'ZNF580', 'LOC154449', 'IFT88', 'ZNF295-AS1', 'ARFGEF3', 'HELZ', 'C3ORF58', 'DEGS1', 'UBE2Q2', 'GNAO1', 'LINC01101', 'SNORA1', 'ARFGAP1', 'COMMD7', 'PIP4K2B', 'TSSC4', 'SF3A2', 'UXT', 'NXN', 'HEXB', 'GPR158-AS1', 'SART1', 'ZNF837', 'TRPV2', 'TADA3', 'KANK4', 'SEC24B', 'ANAPC16', 'LGI1', 'B4GALNT1', 'FAM58A', 'LPCAT2', 'CRACR2A', 'LOC642929', 'UQCRFS1', 'RIC3', 'PUS3', 'MPP2', 'BUB1B', 'C8ORF59', 'DEFB107A', 'SMTNL1', 'KCNAB2', 'NT5DC3', 'PPWD1', 'CHRNA4', 'MRPS22', 'ERICH6', 'KIF9', 'YBX1', 'SPATA3', 'HSD11B2', 'CD6', 'DRC1', 'CBX3', 'DUSP26', 'MRGPRX2', 'TMEM252', 'ATXN2', 'TEX9', 'HSPA1B', 'CRYBB1', 'VPRBP', 'WNT9A', 'MRPL3', 'ATP7B', 'GYPA', 'ARAP1', 'KRT84', 'MMP23A', 'CSNK1E', 'SNORD1C', 'MED8', 'TOP1P2', 'TRERF1', 'RCE1', 'RPL23AP64', 'TRMT10B', 'ZNF117', 'C10ORF99', 'VAV3', 'DKKL1', 'POLB', 'TMED10P1', 'SLC36A1', 'TRIQK', 'ROPN1L', 'RLN2', 'CASP9', 'DNAJB9', 'ADAM18', 'SHISA4', 'CFL1', 'PDE8B', 'GPR180', 'UBR1', 'THRA', 'IL12B', 'ZNF607', 'CLP1', 'IL1F10', 'CPN1', 'NANOS2', 'BTBD6', 'CUL2', 'SESN2', 'GJA5', 'RPP25', 'LAMB1', 'UGT2B4', 'SNORA61', 'MRPL42P5', 'KSR1', 'CLDN25', 'PRSS38', 'MMP2', 'RBM24', 'ITFG1', 'CYP1B1', 'MS4A7', 'CHURC1', 'PVRIG', 'RUNX1T1', 'KRTCAP2', 'SIKE1', 'HSPA2', 'TF', 'C16ORF62', 'PLAGL1', 'SARS', 'PPP1R35', 'MDS2', 'CCDC62', 'FAM156A', 'CCS', 'SLC5A11', 'RIN1', 'CYTH4', 'SNORD123', 'C7ORF61', 'CEL', 'LINC00115', 'KRTAP10-8', 'TOX', 'DENND2D', 'SLC4A1AP', 'ITPK1-AS1', 'C14ORF132', 'KCNMB4', 'UNK', 'SH3GL1', 'PHACTR3', 'HSD3B1', 'ANGEL1', 'SP5', 'PRR26', 'DCHS2', 'DSC2', 'ANKFN1', 'MC5R', 'ZNF133', 'EIF6', 'DCAF4', 'HIATL2', 'LSP1', 'COL23A1', 'MOAP1', 'P4HTM', 'ARHGAP10', 'CHAT', 'NAA11', 'FKBP8', 'PRSS50', 'P2RY4', 'ARL3', 'MAGEA6', 'EXOC3L1', 'OVGP1', 'TMEM47', 'TROVE2', 'HS6ST3', 'WDR20', 'CASQ1', 'PIGV', 'WFDC1', 'PNKD', 'SASH1', 'C20ORF27', 'FAM228B', 'LINC00469', 'MED25', 'DIDO1', 'MAPK6', 'CST11', 'HEBP1', 'MAD2L2', 'GLTSCR1L', 'GIF', 'ASH1L-AS1', 'DPRXP4', 'NUP188', 'PDXK', 'DDX3X', 'LINC01184', 'TTF2', 'SLC15A4', 'CXCL6', 'CROCCP3', 'RBM15', 'APCDD1', 'NOL4L', 'IGFN1', 'HNRNPA1L2', 'RASSF9', 'RNF7', 'CALCOCO2', 'OR12D3', 'MRPL57', 'SLC25A44', 'FOXL1', 'CD1B', 'MAN1B1-AS1', 'HIST1H2BJ', 'SURF2', 'NUP37', 'C17ORF67', 'IDUA', 'PRSS57', 'ZNF526', 'A4GALT', 'SPAG4', 'NHLRC4', 'FN1', 'PMS2P4', 'SLC33A1', 'SEC11C', 'NBPF1', 'PPIG', 'TRNP1', 'MYO18B', 'PNCK', 'S100A12', 'NOS2', 'DHRS7', 'VPS13D', 'PELI2', 'SPP1', 'IL17RE', 'ANKRD20A20P', 'NPB', 'DSG1', 'PEX2', 'LPAR4', 'SPEN', 'ROR1', 'NBPF3', 'CCDC83', 'ZNHIT1', 'CCDC12', 'LINC01420', 'GTF2B', 'RFC1', 'FLJ37201', 'DNAH10', 'GATS', 'C2ORF15', 'TRHDE', 'C5ORF49', 'CLDN23', 'SCUBE3', 'SHKBP1', 'NOC2L', 'DUSP10', 'RBP2', 'IVL', 'KLHL42', 'PRUNE', 'ZDHHC5', 'TDRD7', 'PLEKHD1', 'YOD1', 'PAFAH1B2', 'C9ORF170', 'FAM127C', 'TIE1', 'PRKAR1B', 'DALRD3', 'CYB5D2', 'NRG2', 'PRKD3', 'HERC2P2', 'NALCN', 'MRGBP', 'BTC', 'CHML', 'FLT1', 'CEACAM21', 'ZNF556', 'STRN', 'TTL', 'SLC51B', 'GPR88', 'HGFAC', 'DNAJB3', 'BEND2', 'ALCAM', 'KIF20A', 'CD4', 'PPFIBP2', 'LCN8', 'BLCAP', 'PQLC3', 'CLSTN2', 'ADAM11', 'COL24A1', 'RPL37', 'OR52E6', 'C2CD4A', 'PRKCD', 'CCDC112', 'OR51B4', 'CBX6', 'HAND2-AS1', 'PARD3B', 'ZNF497', 'PDIA3P1', 'TNFRSF10C', 'HINT2', 'SNORD6', 'PKD1L1', 'C5ORF38', 'ZWINT', 'MRAP', 'BMP1', 'PTH2', 'ACTR3C', 'C14ORF177', 'KCNC2', 'PP12613', 'NIT1', 'EPB41L5', 'YBX2', 'SNORD26', 'CLK4', 'ZFAT-AS1', 'SLC36A4', 'POU6F2', 'FAAH2', 'GPR161', 'GRAMD3', 'HIST1H2AM', 'ITPKC', 'RIMS1', 'CEP63', 'DKFZP779M0652', 'DNAJC30', 'CHST2', 'NDUFA3', 'HNRNPU', 'FUT10', 'RHOG', 'TWF2', 'ZFPM2', 'KIAA1586', 'CENPBD1', 'FXYD7', 'CACTIN', 'CD3EAP', 'MPO', 'NECAB1', 'DCT', 'GABARAPL3', 'PRDM14', 'STMN1', 'OR52W1', 'FMNL2', 'LYSMD3', 'TCOF1', 'PARVG', 'CX3CR1', 'LRRK1', 'PPP6C', 'ILDR1', 'LOC100132111', 'ZNF34', 'CCDC51', 'FAM174A', 'ZCCHC16', 'CDRT15', 'FAM19A1', 'LSM8', 'ZNF106', 'FBXO33', 'SULF1', 'IL22', 'ZNF655', 'TMSB4XP8', 'LOC728024', 'BOP1', 'SMARCD2', 'RAB6C', 'GFPT1', 'HDGFL1', 'ADPRHL1', 'POMC', 'JDP2', 'FNIP1', 'SRP14', 'OR2T11', 'CANX', 'CGB7', 'INSM2', 'TNNI1', 'TISP43', 'NOA1', 'FCGR3A', 'HAPLN2', 'VWA2', 'PRB4', 'FAM109B', 'RPL26', 'ATP6V1A', 'ACTR3BP2', 'RAB40AL', 'ATP1B1', 'ANKEF1', 'NANOG', 'PDLIM2', 'ATP5C1', 'TAB2', 'MYO1G', 'KALRN', 'NOG', 'CD276', 'SNORD81', 'ALX4', 'KIF21A', 'TJP3', 'ATP2B4', 'UNC45B', 'DNMBP', 'HMGXB3', 'SYNPO', 'OR52A5', 'IGF2R', 'LINC00452', 'SELL', 'CTDP1', 'RAC1', 'NAA15', 'MED1', 'CCDC82', 'TBL1XR1', 'TMEM229B', 'HMGB3P1', 'MYCNOS', 'WDR36', 'NAV1', 'TBRG4', 'SPATA18', 'PRPF19', 'OCEL1', 'ESM1', 'PRH2', 'LOC729609', 'PBOV1', 'ANXA11', 'MAFG-AS1', 'SNORD24', 'C17ORF47', 'CSF3R', 'KDM3A', 'FREM1', 'RPRD1B', 'RGS10', 'SMURF1', 'RANBP3L', 'OSGEPL1', 'MSGN1', 'LIMK1', 'CYP39A1', 'CCDC124', 'TNK2', 'CACNB2', 'HIST1H3G', 'ADRA1D', 'SSX4', 'SLC4A4', 'BCL2L10', 'TMEM41A', 'ZEB1', 'MDM4', 'MSN', 'ADGRG1', 'ART3', 'MORN1', 'GOLGA8B', 'FAM184B', 'IQCF5', 'SERPINA11', 'OR3A3', 'MRPS23', 'SCARNA1', 'TIMP4', 'AP3D1', 'FZD7', 'CACNG5', 'HLA-DRB1', 'BOK', 'GGT5', 'AOC2', 'CAPN9', 'EIF2S3', 'NABP2', 'SYNE2', 'SPRTN', 'IFNA8', 'SLC35A5', 'OR2T33', 'ELOVL2', 'GYG1', 'FLJ13224', 'PSTPIP1', 'GOLGA2P5', 'FBXL8', 'DSE', 'IRF2', 'ZFP69', 'FSTL1', 'SNAR-G2', 'CSTL1', 'ZNF224', 'SCAF1', 'RNF157', 'CNNM2', 'ESPN', 'ZNF584', 'LOC644669', 'OLMALINC', 'DOCK6', 'CNBD2', 'GUF1', 'KRT33B', 'ALDOB', 'OR2M4', 'PRG3', 'OR5K2', 'NDUFAF4', 'MRPL33', 'PEX7', 'NIPSNAP3B', 'FZD9', 'P2RX1', 'APMAP', 'PEX11B', 'C17ORF89', 'ALPL', 'FOXJ2', 'AFAP1L2', 'CNOT3', 'TEX28', 'APPL2', 'NXT1', 'VTRNA1-3', 'CXADR', 'ADGRB2', 'DHRS2', 'DNER', 'TMEM257', 'KCNG4', 'POU3F3', 'TSPYL5', 'SIGLEC9', 'SNORA8', 'KIAA1328', 'LINC01134', 'DACT3', 'SON', 'ZMAT1', 'TRAM2', 'ZNF418', 'PHLDA2', 'DTX1', 'SKA3', 'MSRB1', 'UNC119', 'TAF7', 'LCLAT1', 'NFKBIZ', 'SLC22A4', 'NUP210L', 'ZNF195', 'LCORL', 'LRRC75B', 'RBP7', 'CYP46A1', 'C19ORF45', 'SCARB1', 'SFMBT2', 'MTR', 'CD44', 'ZNF484', 'HLF', 'DCBLD1', 'CDCA7L', 'CD68', 'PON3', 'NDNF', 'TRIM29', 'USP29', 'TNFAIP2', 'C14ORF105', 'SEPT7P2', 'KIF1A', 'LINC00113', 'TDH', 'PLA2G16', 'PSORS1C1', 'CROT', 'SPATA6', 'IFT122', 'LINC00883', 'JSRP1', 'GDF5', 'SHISA9', 'SYCP3', 'IDE', 'DEFB109P1B', 'HES7', 'SMIM10L2A', 'ANKRD46', 'MEX3A', 'SDC1', 'WIPF2', 'MAGEA4', 'TBX20', 'SPINK14', 'ECSIT', 'EHD1', 'TRIP6', 'LINC00202-1', 'LPAR6', 'IRGQ', 'AKAP8', 'KIF4A', 'ABHD8', 'MIEF2', 'CLDN3', 'GNG12', 'ZNF337', 'PCDH7', 'NUCB2', 'LINC00893', 'SCN10A', 'CTSC', 'NAA25', 'SEMA4C', 'GSTM2P1', 'RBP1', 'KCTD12', 'PDCD6IP', 'PSMG3-AS1', 'HEATR3', 'PRICKLE1', 'STYXL1', 'ATP5A1', 'RPS3A', 'HDAC2', 'ATP6V1G2', 'ATP1B4', 'ZNF146', 'SNAI1', 'TBX2', 'DTD2', 'INO80', 'KHDC3L', 'NLRC4', 'ARPP19', 'DHFRL1', 'NYAP1', 'UXS1', 'LRRC31', 'XKR3', 'SAXO2', 'SNORD88B', 'CRYBA1', 'ZBTB42', 'LYAR', 'CYSTM1', 'KRTCAP3', 'CYHR1', 'LINC00482', 'TATDN1', 'FUT1', 'TVP23B', 'RGS12', 'R3HDM4', 'CGNL1', 'RMST', 'RPLP0', 'RFNG', 'DOCK8', 'ITPR2', 'DUOX1', 'LINC00905', 'TRPV5', 'TEKT5', 'ENO3', 'SERPINC1', 'HCFC1R1', 'SIGLEC10', 'PHF1', 'PCM1', 'CCDC66', 'CDK3', 'PP7080', 'ZNF749', 'TNS3', 'LRRN3', 'TBC1D13', 'MED12L', 'XAGE3', 'IGF2-AS', 'GYS1', 'HYKK', 'RPP25L', 'RPIA', 'METTL13', 'MED13', 'PLSCR1', 'RCAN1', 'TNFRSF12A', 'GPR32', 'SLC35G1', 'FAM188B', 'TSPAN18', 'CRYAB', 'MCAT', 'PTPRA', 'FAM20B', 'MSRB3', 'LRP4', 'FOXN3', 'TYMP', 'PLA2G10', 'ZNF330', 'TNFRSF6B', 'ZNF223', 'CSHL1', 'SHC1', 'SMOC2', 'RALA', 'RBL2', 'ST7-OT4', 'PROX1', 'MUCL1', 'FAM134B', 'SLC35G6', 'LARP1B', 'ATP2B1', 'ARNTL', 'CXCR1', 'ZNF321P', 'HK3', 'F7', 'UBE2NL', 'ZNF230', 'NHLH1', 'SOX3', 'OGFOD2', 'ATG7', 'SLC45A2', 'KRT18P55', 'KRT35', 'H2BFM', 'BMP3', 'GYPC', 'PTPN6', 'CDK20', 'AFF3', 'LINC00471', 'GJD4', 'SNORD116-3', 'INHBA', 'CNFN', 'SPATA31D5P', 'SLC7A9', 'ARID4A', 'FSHB', 'ARSD', 'BGN', 'AP1G2', 'CBWD6', 'PDLIM1', 'ZNF473', 'PYGL', 'TMEM41B', 'DKK3', 'ZNF213', 'ZNF69', 'BNIP2', 'KDM8', 'PGM5', 'ACIN1', 'CSNK1G3', 'PTBP2', 'TRIM24', 'FABP5', 'PDCL3', 'ATIC', 'RPL23AP53', 'CYBRD1', 'RPS11', 'PSMA3', 'P2RY10', 'EML6', 'ZSWIM5', 'METTL6', 'PROCA1', 'WDFY1', 'DFNB31', 'FCHSD2', 'C12ORF50', 'RPSA', 'SNORA75', 'C17ORF98', 'WDR41', 'RORC', 'ATP8B1', 'HSPBP1', 'STRIP1', 'ZNF566', 'OR4N3P', 'TMTC3', 'FAM76A', 'OGDH', 'ZNF92', 'COG1', 'CYP2R1', 'SAMHD1', 'RPLP1', 'LRRTM1', 'TTC37', 'PIGN', 'OR8B12', 'WIPI1', 'CNKSR1', 'SRXN1', 'LIN7B', 'ACOT12', 'MCUR1', 'MAGEB16', 'KIAA1551', 'IL1B', 'CELSR2', 'ZNF470', 'CPPED1', 'HDC', 'DNAJC24', 'TMEM178A', 'SEC16A', 'MSL3P1', 'APBB1', 'F2R', 'LOC441601', 'MRPL34', 'NUTM2F', 'MOSPD2', 'ZNF512B', 'TNFSF11', 'RPS6KA6', 'NMUR1', 'GLO1', 'GMNN', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.826814614065426e-15 NRMSE: 4.646137017893197e-16 MAPE: 6.140551189466964e-12 Pearson Correlation: 0.22191318181457031 Spearman Correlation: 0.223157395977506 Coefficient of Determination: -0.9323695828718424 RMSE: 0.7341738625962578 NRMSE: 0.19664493440371175 MAPE: 535.9516524020285 Predictor: ElasticNet Pearson Correlation: 0.4410787924347068 Spearman Correlation: 0.458958057462168 Coefficient of Determination: 0.1517053767398021 RMSE: 0.3903256295866068 NRMSE: 0.09927150476528061 MAPE: 640.509260080489 Pearson Correlation: 0.45121684723584904 Spearman Correlation: 0.43182333944313517 Coefficient of Determination: 0.13072375016405913 RMSE: 0.492416650611301 NRMSE: 0.13189142911779858 MAPE: 164.1153531419841 Predictor: RandomForests Pearson Correlation: 0.6734345236301865 Spearman Correlation: 0.5861609441449053 Coefficient of Determination: 0.3733145022177705 RMSE: 0.33548919234455304 NRMSE: 0.08532495545272084 MAPE: 742.5305643383498 Pearson Correlation: 0.5476254232057216 Spearman Correlation: 0.47778899986284123 Coefficient of Determination: 0.23685356705322813 RMSE: 0.4613789347949702 NRMSE: 0.12357812636801131 MAPE: 178.35949114078352 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['RCCD1', 'LOC100129534', 'SEMA6A', 'PLA2G4E', 'SLC12A8', 'HEATR3', 'EAF2', 'PPBPP1', 'DEFB115', 'HHAT', 'ESAM', 'TNFRSF6B', 'TMEM106B', 'TNNT3', 'DNAJB6', 'TCN2', 'AGRN', 'MITF', 'PUSL1', 'RFX5', 'USP46', 'TRAPPC1', 'HTR1B', 'SNORD116-23', 'EDARADD', 'ZHX1', 'MICAL3', 'DNAJC17', 'CEACAM8', 'ATRN', 'KCNE5', 'KLHL18', 'MRPL45', 'GAL', 'TCP1', 'ZKSCAN8', 'FOXP1', 'CTBP1-AS2', 'OR10H5', 'MSMO1', 'CD53', 'PAN3', 'KLK1', 'FLT3LG', 'TEX36', 'AOC3', 'SSX5', 'ASTL', 'TRHDE', 'TAS2R40', 'CFC1B', 'ANKRD13B', 'PRAMEF17', 'LPAR5', 'PLEKHG1', 'PPP2R1B', 'MCM10', 'DRG2', 'LVRN', 'CDC26', 'INO80B', 'HBBP1', 'AJAP1', 'SELP', 'SNORD63', 'ARHGAP6', 'LTBP2', 'OR51E1', 'HOOK1', 'SCN5A', 'OR2C1', 'SIPA1L1', 'CLEC14A', 'FOXB2', 'ITPK1-AS1', 'LINC00896', 'MSRA', 'SLC44A3', 'MTHFD2', 'LRRTM2', 'SNORD98', 'SMARCE1', 'SSH2', 'ITGA3', 'SNRNP25', 'RPS18', 'CDV3', 'C19ORF71', 'CHD5', 'IL1A', 'RUNX1T1', 'CIB2', 'SEPT2', 'HCRTR1', 'SNTG2', 'RSPH9', 'DCAF8L2', 'WDR31', 'UGT2A3', 'OR10T2', 'ANKRD54', 'PAGE4', 'TOMM5', 'CPXM2', 'LINC00282', 'ZKSCAN4', 'SCAF8', 'CLCA3P', 'PQLC3', 'ZNF281', 'EXO1', 'NUTM1', 'PCDHA6', 'MYL12B', 'RAB21', 'CCDC173', 'DLG5', 'CDC14A', 'DET1', 'MAP4K5', 'IGFL2', 'RCHY1', 'OR5AN1', 'ATAD1', 'TCEB3B', 'DAPK1', 'PLEKHG3', 'RC3H1', 'GPR18', 'SNX19', 'ZBTB3', 'NUDCD1', 'SMNDC1', 'LYRM4', 'RNF186', 'TMEFF2', 'ANLN', 'CDHR2', 'FAM3D', 'OR3A3', 'USP3', 'C2CD2L', 'GID8', 'RBM26', 'TMEM101', 'C10ORF131', 'SNORA6', 'RXFP4', 'KLF10', 'KLLN', 'TMCO3', 'DMRT2', 'OR56A5', 'SOX3', 'BLOC1S2', 'FAM189B', 'TRIML1', 'ITCH', 'SDHD', 'GRAPL', 'TRPC2', 'PAK7', 'LBP', 'BTD', 'CCNI2', 'CREBRF', 'C8A', 'ACOT6', 'PGBD5', 'IGIP', 'LYN', 'POM121L12', 'RNF146', 'SMTNL2', 'FAM229B', 'DAP3', 'HSPH1', 'FKBP10', 'ECE2', 'HS6ST1', 'GNAT1', 'THAP8', 'CELF6', 'AP3S1', 'CDH9', 'C2CD4B', 'KRTAP5-4', 'LINC00200', 'PPM1N', 'LINC01018', 'TMEM59', 'NMNAT3', 'NFKBIA', 'MSX2P1', 'C22ORF46', 'NOTCH2', 'TMOD1', 'PAF1', 'SNORA40', 'RSPRY1', 'ADGRF2', 'ENOX2', 'POP5', 'MMS19', 'POLM', 'BAMBI', 'TGFB3', 'TMEM56', 'ZYG11B', 'BTBD6', 'DBNDD1', 'CEP41', 'KANK4', 'TUBB', 'COMMD3', 'GYG1', 'LRR1', 'CX3CR1', 'ZNF132', 'CORO7', 'CTSD', 'EYA1', 'KLHL26', 'SUN5', 'TTC41P', 'ZNF232', 'TKT', 'ZMIZ1', 'SMIM10', 'FAM173A', 'ATP5G1', 'SURF4', 'RPL8', 'RRAGB', 'PLET1', 'AMDHD1', 'SIDT1', 'AHSA1', 'STRBP', 'LACTB2', 'JOSD1', 'PPP1R3F', 'YIF1B', 'NR3C1', 'SATB2', 'PFDN4', 'CLUH', 'ZNF682', 'LIN54', 'ACTR3C', 'SIRPB1', 'FOXR2', 'FAM53C', 'FZD7', 'NTSR1', 'SCOC', 'CRMP1', 'PLK2', 'HNRNPCL3', 'TMSB15A', 'KALRN', 'IGSF11', 'ASIP', 'CCDC141', 'BLOC1S4', 'P2RY11', 'C10ORF111', 'OR7E24', 'UQCRB', 'ZNF837', 'CCDC64', 'LRRC18', 'MSS51', 'LCN9', 'PF4V1', 'BRD7P3', 'OTOS', 'SPAG16', 'KLHL15', 'DHRS11', 'CELA3B', 'LAX1', 'SEC14L3', 'LTF', 'PFDN5', 'KRTAP20-1', 'SLC28A2', 'SNORD115-26', 'LENG8', 'ATP5G2', 'MCEE', 'LOC100270746', 'CDK10', 'LRRC39', 'OR2A14', 'CPSF1', 'CNTN6', 'NLRP2', 'PEX12', 'TCTEX1D4', 'IFNA1', 'INTS12', 'LILRA4', 'LINGO4', 'LCORL', 'RPL28', 'KIAA1549L', 'GJB3', 'SIRPD', 'PPP2R2D', 'ZNF480', 'TRIM46', 'EIF1', 'OR4K14', 'ZNF497', 'DUSP3', 'SLC36A4', 'ANKRD12', 'CPSF6', 'AKAP7', 'KNG1', 'SPOCK3', 'CCBE1', 'HTATSF1', 'ELAVL3', 'GPR174', 'CAMK1G', 'KCTD21', 'QSOX1', 'PADI1', 'KRT38', 'TMEM55B', 'SLC7A2', 'HMX3', 'RBM4B', 'APCDD1', 'ERMARD', 'CDK19', 'VCX', 'SLC16A13', 'TAS2R14', 'SPINK9', 'INTS4P1', 'ANXA11', 'LINGO3', 'HMP19', 'ARL13A', 'RBM6', 'DGCR8', 'OBFC1', 'CTGF', 'CCL17', 'DIP2A', 'KPNA7', 'PDYN', 'ZNF280D', 'ADGRA3', 'RALGPS1', 'AKT1', 'NWD2', 'ABCA4', 'HGF', 'TP53AIP1', 'SEPT8', 'LINC00319', 'ERAP2', 'ABCA9', 'C11ORF45', 'PPP1R1A', 'SNCB', 'CSDC2', 'ROPN1', 'PROM1', 'CRYGB', 'AQP4-AS1', 'FCGR1A', 'DKFZP434L187', 'TSNAX-DISC1', 'PKIG', 'DAXX', 'MYO5C', 'PITPNB', 'HIST1H2BK', 'OR9A2', 'KCNH8', 'R3HDM1', 'BMS1P20', 'KIF1B', 'ZNF37A', 'SETD6', 'C14ORF169', 'KRTAP6-3', 'PRDX6', 'GUK1', 'ATP6V1A', 'FOLR2', 'SNAR-A2', 'WIZ', 'SNW1', 'DRICH1', 'MPLKIP', 'PAPSS2', 'CMC2', 'PLXND1', 'LGALS7B', 'SNORA45A', 'C17ORF67', 'FAM214B', 'IP6K3', 'NDUFAF5', 'MKRN3', 'BBS12', 'UNC93A', 'PKHD1L1', 'LRRC66', 'LOC283922', 'GAGE12J', 'FLJ37201', 'LOC654342', 'STAB1', 'ARL16', 'VPREB1', 'ZBTB42', 'SNORD114-6', 'PRNP', 'HSD3B7', 'TOB2P1', 'AKR7A3', 'MAMSTR', 'RANBP1', 'FCRL3', 'CNTD2', 'SLFN11', 'CAPG', 'MLF2', 'CD207', 'SYP', 'ATRX', 'MTMR2', 'SLC52A1', 'DCDC2', 'EXD1', 'COX18', 'INSL3', 'RNF13', 'CENPM', 'GSTT2', 'ASCL3', 'KCTD4', 'LINC00894', 'ANXA2P2', 'TNFRSF11B', 'TCERG1', 'NOTUM', 'BCL10', 'NUPR1L', 'USH1C', 'HSFX2', 'SLC44A5', 'CCDC28B', 'TOR1A', 'SRRM4', 'PPM1L', 'ATP6V1C1', 'FBXL16', 'C12ORF42', 'DCST1', 'ZNF225', 'C14ORF132', 'FAM122C', 'GPR37', 'GCNT1', 'SPRY2', 'GOLGA6L6', 'ANAPC13', 'UBE2V2', 'SOCS7', 'FAM160B2', 'SPIN4', 'OR2V2', 'NRXN1', 'SLC25A18', 'POLG', 'MYOF', 'ADGRA2', 'RD3', 'HAND2', 'NOL10', 'CLEC11A', 'CERS6', 'TYMSOS', 'MRGPRE', 'AIPL1', 'PCBD1', 'SH3RF3', 'AMICA1', 'ISX', 'OTOA', 'CHRNA7', 'ATP6V1B2', 'CYP2B6', 'C10ORF25', 'LYST', 'SSX9', 'TMEM79', 'WDR78', 'MDP1', 'ZNF473', 'SLC2A4RG', 'RPPH1', 'TRIQK', 'NRG2', 'GIMAP4', 'TRAF6', 'EPS15', 'XDH', 'TBXA2R', 'ATP10A', 'P2RY4', 'SLC22A24', 'KRTAP9-2', 'S1PR4', 'C6ORF141', 'LINC00895', 'HDAC10', 'ZBTB10', 'WARS2', 'PIWIL4', 'SECISBP2', 'MED9', 'C11ORF95', 'TBL3', 'G6PC2', 'HOXB5', 'FIP1L1', 'KRT12', 'BID', 'PTH', 'C11ORF84', 'PRDM13', 'SH2D3C', 'SGPP1', 'RBBP8', 'MCM2', 'BCL7B', 'PDGFRA', 'CENPP', 'SNORD91A', 'ZFHX3', 'ADAM10', 'IFI27', 'AARSD1', 'TNFRSF14', 'TBC1D3B', 'GJC1', 'MEOX1', 'PITPNM1', 'FAM89B', 'NYAP1', 'CDH23', 'SLC39A2', 'SREK1', 'BPIFA2', 'NUBPL', 'KMT2E-AS1', 'FAM120C', 'RAPGEF5', 'DMTN', 'WDPCP', 'SNORA70B', 'NRIP2', 'LYZL2', 'MXD4', 'CYFIP2', 'C8ORF46', 'SSR1', 'MYO5B', 'ZNF175', 'C14ORF79', 'OR10S1', 'LDLRAD4', 'TBC1D13', 'ZNF142', 'EVC2', 'SLC6A15', 'ARGLU1', 'CMTM6', 'GNA11', 'DENND1A', 'KRT83', 'BTN2A3P', 'PPWD1', 'RNF112', 'SYNM', 'RGR', 'EMC3', 'CCDC74A', 'HEPN1', 'EGOT', 'FLJ33360', 'TCEAL6', 'ANGPTL2', 'BCS1L', 'PPP6R2', 'VPS28', 'B3GNT8', 'LDLRAD2', 'ZNF177', 'KRT81', 'CACNA1C', 'DHX15', 'UTP20', 'GTPBP3', 'IQCC', 'DNAJC19', 'ZNF768', 'IGFBP7', 'DIS3L2', 'GAGE2D', 'ABRA', 'GPR141', 'CACNB3', 'COQ10A', 'MNDA', 'FBLN5', 'ALOX15', 'RHBDD3', 'ALOX12', 'ZNF585A', 'NUGGC', 'GRIN3B', 'GPR157', 'MT1X', 'TNC', 'ANP32A-IT1', 'XYLB', 'CTXN2', 'MMP23A', 'TMEM256', 'AHCTF1', 'LGMN', 'STBD1', 'RPS4Y1', 'RAB8B', 'RDH12', 'XIRP2', 'DDX5', 'SARS2', 'NPAS4', 'HIST1H4C', 'FAR2', 'ZNF436', 'HNRNPK', 'KANSL1', 'SLC24A2', 'PLEKHO2', 'PRSS53', 'MRAP2', 'SPPL2A', 'OR2A4', 'CHRNE', 'HENMT1', 'SENP3', 'ZDHHC23', 'HPS3', 'SPSB1', 'UBN2', 'HLA-DRB1', 'GPRIN3', 'TMEM134', 'GNG13', 'CD63', 'GARS', 'SDPR', 'KLRK1', 'GOLGA6L1', 'ZNF335', 'SPON1', 'SIRPG', 'SNORD114-31', 'SPOCK2', 'KCNH7', 'SENP6', 'CPO', 'PTDSS1', 'RHPN2', 'LYG1', 'MRGPRX1', 'GORASP1', 'CEACAM3', 'ZNF331', 'NKIRAS2', 'TADA1', 'NT5DC3', 'SDR42E1', 'GNRHR2', 'PLEC', 'ATP2B4', 'HAR1A', 'UBE2J1', 'LINC00883', 'PTER', 'UTP6', 'AOAH', 'RNF180', 'PARP8', 'BRIP1', 'ATP13A1', 'DCX', 'GRIK1-AS1', 'GSTTP1', 'C1ORF122', 'DNAJC3', 'FOXA1', 'PCID2', 'SARAF', 'PUS1', 'ZNRF3', 'ADAM7', 'CCL13', 'PLK4', 'NGRN', 'SLC2A3', 'RAD21L1', 'ZCCHC14', 'CT47A2', 'CYP2B7P', 'FRG1B', 'NXPH1', 'STX16', 'FTL', 'ZNF311', 'ARRDC2', 'FBP2', 'POU3F1', 'TUSC7', 'CRSP8P', 'BIRC6', 'KIAA1522', 'RABL2A', 'TFIP11', 'SPI1', 'VASH1', 'PFDN6', 'JUN', 'SNORD48', 'TLDC2', 'ARHGAP44', 'SLC5A12', 'PLA2G3', 'SKA3', 'KIAA1024', 'DCD', 'SIPA1L3', 'CASP8AP2', 'LOC148696', 'CEP68', 'ASPH', 'PHOX2B', 'BASP1', 'CHCHD5', 'CHIT1', 'GNS', 'GUCA1A', 'PSME2', 'CHD4', 'ST3GAL5', 'CDK2', 'SUPT5H', 'LAMTOR3', 'CEP44', 'FAM47E', 'HINFP', 'SNORA7B', 'LOC100130691', 'SAMD5', 'NDUFS5', 'PDE4C', 'C14ORF177', 'TCEAL2', 'ATL2', 'IFNW1', 'SNORD114-9', 'NFATC4', 'LOXL2', 'BMPR1A', 'TMA7', 'KCNMB2', 'DUS4L', 'LINC00174', 'TCTN3', 'TAS2R46', 'FGF8', 'LRRC56', 'SYT15', 'SNAI2', 'KATNA1', 'LOC113230', 'CCDC106', 'LINC00899', 'METTL1', 'PIK3R3', 'PRAMEF9', 'KIAA1324', 'ZNF428', 'NXF2', 'SLC38A8', 'RDH16', 'CRTAM', 'SNORD115-22', 'BRD3', 'MED30', 'MED1', 'DNAAF1', 'NUDT16P1', 'FAM170A', 'CACNA1S', 'LTB', 'POU5F1B', 'OSBP2', 'PRR12', 'GTSF1', 'PCBP4', 'FGG', 'C19ORF53', 'ERICH3', 'TEAD3', 'C16ORF58', 'POLR2A', 'HYAL3', 'PPP1R32', 'C1QTNF4', 'PDCL2', 'MT2A', 'CYP4F11', 'SMCHD1', 'MAGEA1', 'GOLGA2P10', 'OSM', 'HSP90B1', 'RHOU', 'ZNF687', 'TMEM205', 'PCDH8', 'OLAH', 'TMEM2', 'TMED6', 'PEX11B', 'PRUNE2', 'ASIC5', 'CTU1', 'SRSF11', 'ENTPD5', 'CWC15', 'MAEL', 'OTULIN', 'RAB5C', 'PPP2R5B', 'HCFC1R1', 'EIF5A', 'ACOX3', 'LBX1', 'ZSCAN20', 'SRD5A2', 'ST3GAL3', 'MYOD1', 'NADK', 'CEP128', 'C10ORF53', 'GPHB5', 'CENPF', 'PER3', 'VHL', 'KIF13B', 'KCNIP4', 'CUEDC2', 'SMCO4', 'WRN', 'WDR47', 'TUBB1', 'GNAL', 'CTTNBP2', 'SPATA33', 'TAX1BP1', 'PRORSD1P', 'SSNA1', 'TBL1Y', 'RABEP2', 'COPE', 'ASF1A', 'CTDP1', 'NLE1', 'VPS52', 'LRRC17', 'NHEG1', 'FRMD4B', 'BLNK', 'PRKG1', 'C1ORF194', 'WDR27', 'MOB3B', 'KIR2DL4', 'RPL38', 'NEK2', 'RGS3', 'C1ORF186', 'HCRTR2', 'FGFRL1', 'FBXW7', 'JUNB', 'LHX2', 'HMGN1', 'F10', 'PKD1', 'PRR27', 'CCM2', 'ARHGAP42', 'DSCAML1', 'RBM28', 'ENAH', 'SCLT1', 'CD55', 'RGS16', 'CHST6', 'RSPH3', 'SNORD4A', 'COX19', 'NXPH4', 'UBLCP1', 'SEC22C', 'NPAS2', 'ZDHHC16', 'MAGEE1', 'CST9L', 'PRAME', 'ZNF804A', 'ZNF236', 'SMS', 'PDF', 'SMYD4', 'NTN4', 'IL13RA2', 'CLEC19A', 'FOXN3', 'TENM2', 'FOXM1', 'FBXL19-AS1', 'SENP2', 'SRPX2', 'TMEM87A', 'CLIC2', 'PDCD1LG2', 'SPRR4', 'DMWD', 'PRB3', 'EIF4ENIF1', 'RNF7', 'ZNF678', 'PLA2G10', 'TACR2', 'C3ORF30', 'TIE1', 'CCDC80', 'LCE3D', 'LOC151174', 'CD3EAP', 'NR1H3', 'TPCN2', 'HPRT1', 'CFHR5', 'ZNF57', 'MEGF6', 'SCARNA16', 'SLC50A1', 'CCDC27', 'ZNF544', 'KCND1', 'KCNK2', 'SLC30A9', 'PRELID2', 'HOTAIR', 'ATP5G3', 'DUSP4', 'TM9SF1', 'KRTAP10-5', 'NAGLU', 'C9ORF41', 'MYL2', 'SNORD114-20', 'KRT80', 'KLF4', 'TCAM1P', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999614693844 Coefficient of Determination: 1.0 RMSE: 3.041973221601349e-15 NRMSE: 5.983424904802024e-16 MAPE: 2.186729877848559e-12 Pearson Correlation: 0.2771209195935018 Spearman Correlation: 0.25271886183119496 Coefficient of Determination: -1.9384564717562442 RMSE: 1.1616359085168086 NRMSE: 0.37203421370066153 MAPE: 499.28722864919496 Predictor: ElasticNet Pearson Correlation: 0.4724920816597243 Spearman Correlation: 0.4536482954296437 Coefficient of Determination: 0.12386709828422982 RMSE: 0.7076129255242904 NRMSE: 0.13918428904883762 MAPE: 766.7418316173917 Pearson Correlation: 0.5249273790897075 Spearman Correlation: 0.5061883564632976 Coefficient of Determination: 0.15802610480186807 RMSE: 0.6218128762025456 NRMSE: 0.1991464474977647 MAPE: 257.7846611776414 Predictor: RandomForests Pearson Correlation: 0.6180353674800748 Spearman Correlation: 0.5801801402610748 Coefficient of Determination: 0.2828796913576168 RMSE: 0.6401868855971716 NRMSE: 0.12592188937788584 MAPE: 634.5459340113146 Pearson Correlation: 0.5036827465158542 Spearman Correlation: 0.4780483547176399 Coefficient of Determination: 0.21810105308048866 RMSE: 0.5992191879450519 NRMSE: 0.1919104237283145 MAPE: 238.26454367796157 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['TRMU', 'TULP4', 'MRPS35', 'IPPK', 'ARHGEF9', 'TRIM63', 'CBR3', 'EIF2S2', 'TSPY3', 'NF1', 'GPR34', 'HCAR3', 'DOCK5', 'FAM118B', 'SOX17', 'DZIP1L', 'TBPL2', 'OAS3', 'PFDN1', 'FBXO44', 'NUDT12', 'HEXIM2', 'KLHL6', 'ISCA1P1', 'TNR', 'CNNM2', 'PALB2', 'KMO', 'TLR7', 'SNAR-D', 'ZBTB45', 'GOSR1', 'CES1P1', 'RNF138P1', 'NR2C2AP', 'CHL1', 'C17ORF49', 'ASL', 'PSAT1', 'GALNT4', 'OC90', 'SNORD114-18', 'RBBP7', 'CD22', 'OR2AE1', 'METAP2', 'KRT73', 'ARMCX2', 'RPL11', 'UBE2QL1', 'SLC6A18', 'FGD3', 'TMED5', 'HNRNPH1', 'ROCK2', 'HGH1', 'ZNF843', 'LINC00282', 'NCAM2', 'B4GALT2', 'GULP1', 'CRLF2', 'FXYD4', 'CCR10', 'ZNF521', 'CD8A', 'TOPBP1', 'SIX5', 'CAV1', 'DEFB105A', 'MOGAT2', 'OR10S1', 'LYPD8', 'RAB42', 'SMCO4', 'INTS4', 'TMEM249', 'KMT2E-AS1', 'SOX18', 'LUC7L3', 'SUPT5H', 'STAT5A', 'GLIS3', 'OR13G1', 'PLA2G4C', 'SOX3', 'FOXQ1', 'KCTD20', 'EMCN', 'ERBB4', 'DRAM2', 'MYOM1', 'SMG1', 'DCUN1D4', 'UBTD1', 'ROR2', 'UCP3', 'RNF144A', 'FGF4', 'CIDEB', 'CKLF', 'INO80C', 'CSGALNACT1', 'ODF3B', 'TSN', 'CALML4', 'SSMEM1', 'MRPS23', 'PRKAB2', 'DOCK2', 'CAPN5', 'MTMR9LP', 'IFT27', 'CNTN1', 'NISCH', 'IGSF21', 'MROH2B', 'RBP7', 'C1ORF95', 'OOEP', 'PAX8', 'CLDND1', 'SLC39A8', 'SLC35F4', 'SNORD51', 'DCUN1D5', 'NUP35', 'USP11', 'LMLN', 'PDILT', 'HRASLS5', 'PARP12', 'NXPE1', 'RPLP1', 'GUSBP2', 'NUDCD3', 'SLC35A5', 'SPR', 'RNASEH2C', 'SH3GL2', 'DGCR9', 'DMTF1', 'PRR15', 'ARHGAP36', 'UGT3A1', 'SBSPON', 'TCF19', 'SNRPA', 'OR7G2', 'FDPS', 'RGCC', 'KLF14', 'BACH2', 'SLC4A10', 'KRTAP22-1', 'PCBP1', 'VTI1B', 'DCAF6', 'STK3', 'PTPRR', 'CDH20', 'ABLIM3', 'OR4D2', 'S100A7', 'ACTRT3', 'WHAMMP3', 'TRIM52', 'AGT', 'EME1', 'LINC01548', 'TPTE2P3', 'ZNF599', 'LYPLAL1', 'BNC1', 'MIEF1', 'SWAP70', 'WNK3', 'RRBP1', 'ATP10A', 'GOT1', 'PEX3', 'VAT1L', 'NDUFAF7', 'ATP13A3', 'ABCA8', 'SURF4', 'LLGL1', 'POLL', 'PDIA2', 'TTLL3', 'MXRA7', 'OR2A2', 'AQP7P3', 'OSER1', 'TOB2P1', 'MT3', 'PEX7', 'SLFN11', 'DZANK1', 'CBX3', 'CD6', 'TMEM108', 'EFNA5', 'RNF123', 'TOLLIP', 'EIF3A', 'KMT2E', 'PCDHB4', 'PRKAR2A', 'POLR3D', 'ADGRG1', 'KLRD1', 'KRT9', 'ZCCHC9', 'MCMBP', 'NPFF', 'HSF2', 'HMGA1', 'CRB1', 'SIPA1L2', 'OR52N2', 'CAV3', 'ARMC10', 'PAXIP1-AS1', 'SLC2A7', 'BEND7', 'RPL7A', 'SLC22A2', 'NPIPB5', 'MRPS28', 'CNTRL', 'ZBED9', 'BCL2L10', 'SPTBN1', 'DNAJB7', 'TMEM205', 'RPL36', 'PPOX', 'SYT2', 'ZNF321P', 'KGFLP2', 'AMPD2', 'CMTR2', 'RHOU', 'TSPAN10', 'SNORA49', 'FSHB', 'HILS1', 'ASAP1-IT1', 'RUFY3', 'ATP6V0A4', 'CLPSL2', 'SOAT1', 'PLIN1', 'YWHAB', 'GUCY1A3', 'IFIT2', 'UCKL1', 'GAGE12F', 'CHN2', 'GAL3ST1', 'EDF1', 'TAC1', 'CPNE2', 'HINT2', 'SNORA71D', 'CIC', 'RAD1', 'FKRP', 'STEAP2', 'VAPA', 'ATP6V1F', 'PRR18', 'DAB2', 'MROH8', 'TSC22D3', 'CATSPER3', 'CNBD1', 'DNASE1L1', 'C6ORF201', 'QRICH1', 'PCDHGA5', 'IFT122', 'PPP2R4', 'TAF7', 'AP3D1', 'LAIR2', 'THEMIS', 'DCST1', 'DNMT3A', 'CNTNAP3', 'PRL', 'LDLRAD1', 'ARHGAP19', 'JAKMIP1', 'PRSS50', 'HAGH', 'ARPC1B', 'RPP25L', 'HEPACAM', 'RUNDC3A', 'EDN2', 'METRN', 'GSAP', 'CEP135', 'CPT1A', 'BCO2', 'CD48', 'CDK19', 'LRRC47', 'CDC14B', 'CAMKK1', 'RPSAP58', 'ZNF346', 'HECTD4', 'TMEM161A', 'RABAC1', 'LOX', 'ASB9', 'LGALS1', 'PPP1R9A', 'FAM127C', 'ZNF354B', 'TGFBR2', 'MAPK8IP1', 'DBX2', 'TIMELESS', 'BCL2A1', 'COPB1', 'LOC284661', 'SPRR2A', 'KRTAP27-1', 'BRWD3', 'ZNF436-AS1', 'MBOAT1', 'RBSN', 'APCS', 'OR10A5', 'ANKDD1A', 'CDKN2D', 'PRR27', 'OGG1', 'PRAMEF1', 'CLCA3P', 'KIDINS220', 'PRKD1', 'TTC30B', 'LOC400940', 'CCNG2', 'BPIFB6', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.9561496330033633 Spearman Correlation: 0.8800922253387502 Coefficient of Determination: 0.9142221166480251 RMSE: 0.1314418989868878 NRMSE: 0.04681812964804552 MAPE: 30.916879914532007 Pearson Correlation: 0.6514297295570093 Spearman Correlation: 0.3783762889811594 Coefficient of Determination: 0.1294908377673939 RMSE: 0.6046806660607713 NRMSE: 0.14592771341090602 MAPE: 106.97991583521245 Predictor: ElasticNet Pearson Correlation: 0.6820703284006435 Spearman Correlation: 0.5708929023062427 Coefficient of Determination: 0.22548614331256445 RMSE: 0.39496695171722057 NRMSE: 0.1406827966935781 MAPE: 94.4374717654781 Pearson Correlation: 0.5833385018312378 Spearman Correlation: 0.6070325066397337 Coefficient of Determination: 0.13190563943316513 RMSE: 0.6038413883188266 NRMSE: 0.14572517033540716 MAPE: 107.59944660345218 Predictor: RandomForests Pearson Correlation: 0.8636829625366281 Spearman Correlation: 0.712457026649643 Coefficient of Determination: 0.742921578016613 RMSE: 0.22755111866305391 NRMSE: 0.08105115535638607 MAPE: 54.07460623234086 Pearson Correlation: 0.7799485866561141 Spearman Correlation: 0.7329741408810184 Coefficient of Determination: 0.5777147171714084 RMSE: 0.42115540872607354 NRMSE: 0.10163752412724704 MAPE: 76.11008377698171 Protein: CCND1 x_train_column_count: 859 x_train columns: ['ZNF385D', 'CASS4', 'ARL5C', 'MBD1', 'CCK', 'ZDHHC16', 'GMIP', 'LINC00961', 'BLMH', 'AKAP12', 'WRAP53', 'RIBC1', 'MROH5', 'TMEM232', 'MEF2B', 'EFTUD2', 'TFAP2C', 'SHANK1', 'MAP2', 'C3ORF52', 'PAXBP1', 'AGAP2-AS1', 'MYPOP', 'TBRG4', 'FLOT2', 'LCE6A', 'EIF6', 'DNAJB4', 'KRT17P5', 'ZNF77', 'SCLT1', 'SLC35F5', 'NEIL2', 'FAM58BP', 'RANBP1', 'GRIK1-AS1', 'IGSF9', 'ZBTB8B', 'RPL23', 'MAPRE2', 'MICALCL', 'DIO3OS', 'RFX4', 'SLIT3', 'AFMID', 'ZFAND3', 'DIDO1', 'RAB11A', 'PIWIL3', 'TECTA', 'SLBP', 'MTUS1', 'POPDC2', 'LINC00889', 'FBN3', 'ENTPD8', 'SHISA9', 'DCTN6', 'ARHGAP42', 'UBXN10', 'RAB41', 'GINS2', 'ZMPSTE24', 'TNFRSF13B', 'NDRG4', 'SCARNA14', 'C21ORF62', 'RAB40AL', 'OR52K1', 'GUCY2EP', 'DRP2', 'NOXO1', 'MYH10', 'MORN1', 'MAPK15', 'LRRC2', 'AKAP2', 'CACNA2D4', 'NAGA', 'SMG1P3', 'CMTM6', 'HLA-J', 'XK', 'GUCY2C', 'NBN', 'PSMD11', 'ZMYM5', 'SLC35E2', 'SAYSD1', 'PLGLA', 'CLEC4D', 'PGA4', 'KREMEN1', 'COMP', 'HINFP', 'LY75', 'CPA1', 'ZNF546', 'FAM83D', 'AOX2P', 'LINC01558', 'SPATA31D4', 'EGFLAM', 'SNORD113-7', 'ZCCHC17', 'TPPP', 'SLC25A37', 'DDHD1', 'CDK5RAP2', 'MTRF1L', 'AGO3', 'JAK1', 'COX7B2', 'CLCN1', 'DEPDC4', 'LRRC25', 'TTLL6', 'NUMA1', 'MS4A10', 'AKAP8', 'CDK16', 'SEMG2', 'CCDC142', 'JADE1', 'SGCZ', 'ZRANB3', 'GPATCH1', 'CDS2', 'ST20', 'PLSCR2', 'STYX', 'ASIC5', 'C16ORF74', 'OR2V2', 'FAM169A', 'KRTAP10-2', 'XPA', 'MGST2', 'SLC22A24', 'SSPO', 'ZNF705D', 'ZEB1', 'ZNF429', 'CLCA2', 'OR2S2', 'SNX4', 'ZNF469', 'CSTA', 'NLRP14', 'NRBP1', 'TM4SF4', 'RIPPLY1', 'AP1G1', 'DCP2', 'SPINK5', 'PNLIPRP3', 'CLEC3A', 'UQCRBP1', 'STRADB', 'KLHL4', 'PRPF40B', 'DEFB106A', 'FBXO11', 'ERCC3', 'KCTD3', 'OR2L2', 'SYT17', 'DDTL', 'CR2', 'XKRY', 'FLRT3', 'CIDEA', 'NRSN1', 'TNK2', 'JCHAIN', 'SEPHS2', 'ZNF625', 'TMIGD1', 'GRASP', 'CLMP', 'DCUN1D2', 'SYNJ2BP', 'BTBD11', 'SH3D19', 'OR6C2', 'GTPBP10', 'POLM', 'RNF208', 'TOMM7', 'GJD3', 'DIRC2', 'HIVEP1', 'C1ORF109', 'BARHL2', 'ZNF296', 'FBXO34', 'B4GALT3', 'APMAP', 'NXF3', 'ZNF117', 'KIAA0355', 'MEPCE', 'IFNA10', 'SRP9', 'ASTN1', 'LRRC45', 'DUSP23', 'FAM105A', 'RNF2', 'EEF1DP3', 'UQCRB', 'RBL2', 'EIF3A', 'PRKCQ', 'FXR2', 'LBX1', 'SNORD70', 'COX4I2', 'KIAA0040', 'KIF3B', 'RPS16', 'SLC5A6', 'FAM9C', 'IRAK1BP1', 'OR4C46', 'DKKL1', 'IL20RA', 'IFIT1', 'FSCB', 'INPP5A', 'C1ORF159', 'SLC35F3', 'TPT1', 'CLN6', 'GREM1', 'AQP7', 'DENND4B', 'EIF2S3', 'HEYL', 'DDX18', 'HNRNPA3', 'CXCL8', 'GNA14', 'PREX1', 'KATNBL1', 'VWA3A', 'KRBA2', 'RAB11B', 'LINC00552', 'TUG1', 'EPHA1', 'MED27', 'VARS', 'BAHCC1', 'H1FX-AS1', 'ZIC2', 'PDE6H', 'CABP5', 'SUCNR1', 'NUP98', 'GCSAM', 'ZNF833P', 'IGFL1', 'KBTBD8', 'KDM4B', 'ITPA', 'TBC1D3', 'FGG', 'SNORD26', 'OR10H2', 'WDR83', 'RFC1', 'RAD50', 'ALMS1', 'XKRY2', 'UBE4B', 'CNST', 'TTC19', 'NUBPL', 'LOC284009', 'STH', 'ANP32E', 'SFXN5', 'PRKAR2B', 'FSTL1', 'TSTD2', 'MSRB3', 'CCDC174', 'SLC16A13', 'ANXA8L1', 'NOX3', 'ARHGEF7', 'FBXO10', 'UG0898H09', 'LOH12CR1', 'HIF3A', 'CYP4F11', 'FAM214B', 'CAMKV', 'C1ORF158', 'USP15', 'NIP7', 'HIST3H2BB', 'CES4A', 'SORBS1', 'ASB12', 'TMEM104', 'NET1', 'SRGAP1', 'ATP2A2', 'SV2C', 'WBSCR22', 'IFNL3', 'KCMF1', 'FAM151B', 'IFNA14', 'MCTS2P', 'TAB3', 'EPCAM', 'COQ10B', 'MSMO1', 'RBMS3', 'ANKRD13A', 'FSHB', 'CREBBP', 'XIRP2', 'SOD1', 'RHBDD2', 'NHSL1', 'C22ORF46', 'MYOF', 'PTRHD1', 'KLF9', 'DNAJC13', 'RGN', 'COL4A6', 'FAM86JP', 'SPRTN', 'C17ORF85', 'PRDM10', 'FTH1', 'FAM225A', 'DDHD2', 'CX3CR1', 'JMJD6', 'SERF1A', 'MELK', 'NEDD8', 'PCNP', 'FLJ37201', 'KCTD5', 'PTPRU', 'WDR72', 'RPLP0', 'C16ORF90', 'SLC35F1', 'APOL5', 'SNORD116-15', 'RAD23A', 'XKRX', 'MYOM2', 'OR9K2', 'MYOM1', 'GLIS3', 'KCTD1', 'RASSF3', 'ARHGAP1', 'RNF39', 'FUT9', 'PTP4A1', 'CDK1', 'IGF2R', 'SNORD78', 'ZDHHC14', 'PICK1', 'FAM71E2', 'SLC44A3', 'CNTF', 'RAD51AP2', 'PADI6', 'SNORD114-19', 'KRT25', 'PKD1', 'NDUFB8', 'DCTN2', 'CCDC144CP', 'MED26', 'TOMM22', 'TCL1A', 'POLR1D', 'GGCX', 'CDH24', 'DNAJC21', 'ADGRF4', 'ZAR1L', 'EHF', 'DUSP15', 'HP', 'TMEM52B', 'RTEL1', 'TICRR', 'MAPK8', 'ECM2', 'SH3BP5L', 'HEBP2', 'NFATC3', 'CDC27', 'LOC647859', 'PCDH11Y', 'LRRC73', 'SEMA7A', 'LINC01096', 'RSU1', 'C1ORF54', 'FAM217A', 'ARFGAP1', 'SCIMP', 'MAZ', 'HNRNPH1', 'CHAC1', 'PCK1', 'TECRL', 'SLC22A16', 'ZP4', 'TTC39A', 'MDH1B', 'SND1-IT1', 'KCNV1', 'ZDHHC15', 'NDUFB5', 'KLHL38', 'DHX33', 'GPT2', 'RNASEK', 'NDUFAF2', 'SPRR2C', 'PLD2', 'FLCN', 'PIP5K1C', 'GPR180', 'SLC45A3', 'CIAPIN1', 'GTF3C5', 'SNRNP200', 'CYP11A1', 'CCDC102A', 'RNASE2', 'KHDC3L', 'SMIM3', 'FAM83F', 'KRT81', 'NFAM1', 'USP28', 'SIAH3', 'EXOC3L1', 'PCDH20', 'SRPK1', 'PEX2', 'ZIC4', 'SLC30A5', 'RAD18', 'ARPC5L', 'ERCC8', 'GHRLOS', 'ETV1', 'WDR43', 'CETN1', 'PAFAH1B3', 'KIF17', 'MTOR', 'CXCR4', 'PCDH11X', 'MRPS23', 'PM20D2', 'SLC4A1AP', 'CIZ1', 'SYAP1', 'KCP', 'GPR39', 'FAM181A-AS1', 'CD1B', 'ARG2', 'CTPS2', 'SPEF2', 'DHDH', 'TMEM74', 'TACC1', 'ITCH', 'CRYM-AS1', 'OR5K2', 'ATP5D', 'PLEKHG3', 'PI4KB', 'FBXO6', 'CUTC', 'MRFAP1', 'RAB4A', 'CKMT1B', 'SNORA30', 'ATP6V1F', 'IFIT3', 'HNRNPU', 'LSM7', 'TTYH3', 'UBE2V2', 'CHKA', 'DAPK3', 'DLG2', 'NAA35', 'MYH9', 'CEACAM7', 'MBD5', 'NAV2', 'DUS3L', 'MBL1P', 'C1QTNF1', 'LOC389033', 'SPAG1', 'CDH3', 'MPV17L2', 'EXOSC4', 'RIPPLY3', 'RASAL3', 'MCM3AP', 'WDR93', 'ARHGAP27', 'LINC00852', 'OPRL1', 'CCT4', 'WDR7', 'ZNF17', 'FAM74A3', 'ZFP30', 'POLI', 'FGL2', 'SLC7A1', 'LSG1', 'GPHA2', 'EGFL7', 'HPS5', 'HDAC9', 'MAT2A', 'SH2B1', 'ZNF394', 'FREM2', 'PLA2G6', 'PCDHB10', 'TTTY6B', 'THBS3', 'HSPB2', 'RELL1', 'FAM175A', 'SLTM', 'CCDC173', 'C10ORF88', 'PSKH2', 'DERL1', 'SASH1', 'DYDC1', 'CT47A9', 'PTBP1', 'IRS1', 'ARHGAP12', 'PRKCG', 'SPATA31D5P', 'CCDC117', 'BBS9', 'THOC5', 'SAMD4B', 'ZNF284', 'SNORD58A', 'INTU', 'KIF20B', 'TOP3A', 'SLC12A3', 'RBM24', 'ADH7', 'PNPLA4', 'CYP24A1', 'BTG3', 'KIF6', 'KATNAL2', 'PKIG', 'NTHL1', 'TRIM62', 'C8ORF59', 'SUCO', 'C10ORF82', 'C3ORF62', 'UMODL1', 'TAF1A', 'ZNF222', 'DTNBP1', 'GRAMD2', 'EFCAB7', 'MS4A7', 'MTDH', 'PDZD4', 'DNAJB3', 'JOSD2', 'ARHGEF6', 'OR4C15', 'NOX5', 'MC2R', 'ZC4H2', 'RASA4', 'SCAMP3', 'WDR49', 'PARP14', 'SPATC1L', 'ZNF738', 'SOX1', 'CBWD6', 'ARL4A', 'CTXN2', 'DNAAF2', 'AGRP', 'FAXC', 'IL1RAPL1', 'HEPACAM', 'SGOL2', 'MYEOV2', 'VPS18', 'CHRNA3', 'DDB2', 'C2ORF76', 'PAFAH2', 'CRYBB1', 'DSN1', 'CDK5R1', 'SASH3', 'SLX4', 'HECA', 'SNORD114-9', 'LGALS1', 'TTC41P', 'RPL12', 'TSTD1', 'SDHAF3', 'BMP7', 'SCARNA6', 'ZNF829', 'IL26', 'LRRC3B', 'TMEM95', 'KIF18B', 'ZNF579', 'MASP2', 'GALNT2', 'LOC644936', 'VSX2', 'SIAE', 'GBP4', 'SRSF8', 'OR11H1', 'VILL', 'CLUH', 'ZNF271P', 'N4BP2L2', 'ZFAND1', 'N6AMT2', 'MSH3', 'LOC100272217', 'KLHDC8B', 'PRODH', 'LOC100128573', 'C11ORF54', 'PDE3A', 'CRB3', 'MXRA7', 'SGCB', 'WDR83OS', 'SKIV2L', 'SLC25A14', 'DYM', 'RRP7A', 'RELN', 'WTIP', 'FKBP6', 'PHACTR2', 'PADI3', 'ZBTB8OS', 'SEPW1', 'MYEOV', 'C16ORF72', 'SLC22A1', 'ACOT12', 'LPGAT1', 'TPM4', 'ARL13A', 'ADRBK2', 'ECT2L', 'NOM1', 'SNORD54', 'MTERF3', 'NDUFA11', 'LOC285740', 'ZBED8', 'RDM1', 'C11ORF65', 'HIST1H1E', 'ZSCAN21', 'KLHDC1', 'SLC25A24', 'C1ORF189', 'ARL9', 'TINF2', 'CDS1', 'TCHP', 'MDN1', 'TMEM59L', 'HCAR3', 'CCDC70', 'TMSB15A', 'SNORD114-14', 'WDR88', 'USP31', 'ANO1', 'PIGG', 'EBNA1BP2', 'DDC', 'ABCB6', 'PKNOX1', 'OR4F5', 'SNORD115-33', 'ZNF423', 'AP3M2', 'PAM', 'CAPN3', 'SCFD2', 'TAOK1', 'NICN1', 'LINC00909', 'COL1A1', 'BTBD7', 'C4ORF50', 'COG2', 'RPS6KL1', 'ANKRD30BL', 'SAA2', 'NFKBIB', 'PSAPL1', 'ZNF879', 'PEX12', 'SNRNP25', 'MED25', 'BCO2', 'GLRA2', 'STOX2', 'GLT1D1', 'C15ORF26', 'LTBP4', 'FCER1G', 'CDK11B', 'PRELP', 'WFIKKN1', 'RTN4', 'SPATA6L', 'TMEM35', 'FAM210A', 'FBXO7', 'WBP1L', 'POMK', 'PRR14L', 'CDSN', 'SPSB1', 'DNAJA3', 'RRP15', 'ADGRB3', 'TSACC', 'OR5AP2', 'HRC', 'SEC13', 'ICE2', 'IFNGR2', 'C10ORF11', 'COQ10A', 'KHNYN', 'DYNLRB2', 'NR5A2', 'SLC34A1', 'BRCC3', 'UBE2A', 'TMEM256', 'MICU2', 'SLC10A2', 'INAFM1', 'CXORF40A', 'SRXN1', 'IER2', 'E2F4', 'ZNF322P1', 'FOXE3', 'SRSF11', 'SEPT3', 'SCGB1D2', 'PAPL', 'LGALS9C', 'TPCN1', 'KLRB1', 'SS18L1', 'SPANXN4', 'CNKSR1', 'METTL12', 'PTK2B', 'SLC27A1', 'ZNF594', 'CDH15', 'PSMB4', 'CCSER1', 'C5AR2', 'LRFN1', 'TBC1D22B', 'PRICKLE2', 'ADAMTS14', 'ALPP', 'EYA1', 'MRPS31', 'ZBTB3', 'ZNF473', 'TOB2P1', 'TIGD6', 'FAM227A', 'LCE1F', 'WDR66', 'PLIN4', 'GPM6B', 'BCKDHB', 'APOPT1', 'KRTAP5-8', 'SLC35A4', 'C9ORF129', 'PRKAB2', 'NFIX', 'SLC36A3', 'HIP1', 'TBC1D2B', 'BEND3P3', 'MAP2K6', 'MTCH2', 'POC5', 'RUSC1', 'FGD3', 'BEGAIN', 'SBF2', 'PLEKHA8P1', 'SLC5A11', 'HOXA11-AS', 'PRAMEF6', 'TMEM249', 'RASSF5', 'EPPIN', 'SERINC4', 'KLHDC3', 'ZNF260', 'STC1', 'BLCAP', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.045101595477498e-15 NRMSE: 6.582570766637471e-16 MAPE: 3.594973614221472e-12 Pearson Correlation: 0.20261850415007224 Spearman Correlation: 0.1406127258444619 Coefficient of Determination: -1.6530337398163173 RMSE: 0.44948568117968474 NRMSE: 0.28717092880213946 MAPE: 436.4203712525033 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: RandomForests Pearson Correlation: 0.566719699936318 Spearman Correlation: 0.590115032761232 Coefficient of Determination: 0.28504754652284114 RMSE: 0.1924627337189768 NRMSE: 0.12122262276968708 MAPE: 503.740308761076 Pearson Correlation: 0.3463528782785573 Spearman Correlation: 0.29941271088168186 Coefficient of Determination: 0.11641510094042573 RMSE: 0.2593991910030719 NRMSE: 0.1657269847069881 MAPE: 239.867265738016 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['PSD', 'NFYC', 'TMIGD1', 'KHNYN', 'C1ORF131', 'FAM205BP', 'CLEC18B', 'CEL', 'KDM4A', 'HTR1B', 'HNRNPAB', 'KLHDC1', 'SGCA', 'CCDC54', 'NCOA5', 'RBSN', 'SNHG5', 'NUDC', 'RAD9A', 'TBC1D3P1-DHX40P1', 'SH2B3', 'ITGB2', 'AHNAK2', 'PARP15', 'IL15RA', 'IKZF1', 'ANKRD55', 'OPN4', 'FETUB', 'THRB', 'LGALS9C', 'SUN2', 'SOX10', 'HSP90AB2P', 'MGC16275', 'DEFB104A', 'VCPKMT', 'SNORD62A', 'FKBP6', 'STC2', 'CTNND2', 'OR6M1', 'VNN3', 'CYP2A7', 'CXORF38', 'SPTLC2', 'ACVR1', 'TTTY23', 'TMPRSS3', 'RFPL1S', 'RND2', 'SPAG6', 'TMEM59L', 'IGSF8', 'HPS3', 'ABO', 'ZFHX4-AS1', 'LOXL2', 'ANGPTL3', 'HLA-DRB1', 'PAICS', 'MICAL1', 'GGTA1P', 'PRIM2', 'PSRC1', 'GNPDA1', 'OR6V1', 'ADD1', 'MCU', 'ABCF3', 'SCN1B', 'ARMC12', 'EML2', 'CAV3', 'PDXK', 'RRP1B', 'PPIG', 'CLDN11', 'ODF3', 'GTF2IRD1', 'SNORA44', 'HCRTR2', 'KLRF1', 'EMC6', 'CPNE1', 'CMPK1', 'DLL1', 'FAM201A', 'CGB', 'OR6S1', 'PSKH1', 'MYT1', 'HIST2H3C', 'PGK1', 'NQO1', 'HDAC10', 'TRA2B', 'PSMA6', 'ABHD15', 'ZXDB', 'PRAP1', 'CNNM2', 'TRIM8', 'TSPAN32', 'CCDC71', 'CHSY1', 'PLEKHG3', 'NR1I3', 'RNF10', 'PTGS1', 'TFEB', 'DTWD2', 'GRB2', 'EVA1B', 'ARL17A', 'NHLRC1', 'RPS3', 'TMTC2', 'LINC00301', 'ETFA', 'TBC1D3P2', 'HPGDS', 'ZNF44', 'RIIAD1', 'SLC1A3', 'SLC35F1', 'GSTM2', 'ZRANB2', 'TMOD3', 'SULT6B1', 'DHODH', 'ZNF805', 'EME1', 'XKR8', 'USP5', 'CLIP2', 'THAP8', 'RSPH3', 'SNORA16B', 'SNORD91A', 'RC3H2', 'CFHR4', 'GPBAR1', 'IQSEC3', 'USP3', 'DOK5', 'LRBA', 'PARK2', 'IARS', 'TNFRSF10A', 'RAB10', 'MPZ', 'C14ORF132', 'LRCH3', 'ASB16', 'HYAL1', 'PARVA', 'APITD1', 'CHGA', 'ANAPC16', 'CUL5', 'TSHR', 'FAM167A', 'OR8D4', 'ADSL', 'TTTY10', 'RNF214', 'STAM', 'TARP', 'MANEAL', 'CBL', 'MAN1A2', 'KIAA1522', 'LOC153910', 'TRIM69', 'OR5B12', 'SLAMF9', 'HNRNPH2', 'DSCAM', 'AKR1D1', 'FBXO43', 'TMEM102', 'CACNA1E', 'TRDN', 'ZNF793', 'PUS7L', 'LNX2', 'CACTIN', 'SNORD114-3', 'DOC2B', 'METAP2', 'MROH1', 'IL36G', 'LINC00265', 'RASSF4', 'KCTD17', 'PADI1', 'INPP5A', 'DSCC1', 'AK2', 'ENTPD8', 'PMPCA', 'POU2AF1', 'KRT28', 'MCM3', 'SH3PXD2A', 'PHACTR3', 'ARMC8', 'DMP1', 'SCFD1', 'CYMP', 'SPAG7', 'DLG5-AS1', 'DYNLL2', 'CCAR1', 'ZDHHC12', 'SLC22A9', 'ZNF32', 'GMDS', 'ARHGAP33', 'URAHP', 'MATK', 'FAM173A', 'ZNF511', 'ZNF320', 'ANKRD18DP', 'PLRG1', 'MASP1', 'MSGN1', 'LOC729603', 'VAMP1', 'ZNF331', 'RNF112', 'C9ORF91', 'SLCO2A1', 'OSGIN1', 'IFT22', 'ZBED4', 'C1ORF226', 'MKRN1', 'PGBD4', 'TRIM67', 'PLCG2', 'PRKRIR', 'LINC00635', 'CYP26C1', 'FAM120AOS', 'WDR34', 'ALOX15', 'HOMER3', 'ELOVL1', 'KDM5B', 'TMTC4', 'ERBB3', 'C3ORF67', 'SP9', 'WIPF3', 'TMEM248', 'IFNB1', 'FAM81A', 'ADAD1', 'MAX', 'GRIA1', 'TTC21A', 'ATP1A1-AS1', 'VWA5B1', 'CDH1', 'HS3ST2', 'BIRC7', 'NME3', 'LOC728554', 'RSRC2', 'TRIP12', 'HMGB4', 'ZNF74', 'ATG16L1', 'C1ORF228', 'TBC1D14', 'CCDC186', 'MUL1', 'ZSWIM1', 'NEIL3', 'CDCA7L', 'MEAF6', 'KIF1C', 'PHF2P1', 'C12ORF50', 'KAT2B', 'VILL', 'ZFYVE9', 'SBK1', 'PAPD7', 'SCARNA4', 'FAU', 'CSRP2BP', 'MAPT-IT1', 'SYBU', 'PRDM8', 'TSNAXIP1', 'VASH1', 'XCL2', 'IL10RB', 'CYP3A43', 'OR1J1', 'GALNT4', 'DFNA5', 'CLCN7', 'TAAR5', 'NHLRC4', 'DPM2', 'ZIM2', 'RBM19', 'FUS', 'NRGN', 'PLAC9', 'TMEM263', 'UBE2MP1', 'ALDH3B2', 'PABPC5', 'MMD', 'KCNK13', 'WIPI1', 'MCM3AP', 'MRPL30', 'EIF3G', 'CHRNA10', 'MTSS1', 'HCG27', 'SNORD69', 'PSMA5', 'ACAP2', 'RHOV', 'THEM4', 'HEG1', 'XKR4', 'CLEC17A', 'POLE4', 'ADGRF3', 'EFTUD2', 'CTSF', 'NCAPD3', 'ADAM11', 'MC4R', 'TIGD4', 'HLA-DQB1', 'FOXQ1', 'RAB11FIP5', 'RPL18', 'RNF215', 'LOC606724', 'CNKSR3', 'MFSD8', 'FAM103A1', 'ARGFXP2', 'SGCB', 'FAM3B', 'UGT2A1', 'UCMA', 'CEACAM1', 'SLC38A8', 'HIST1H3D', 'IMMP2L', 'B4GALNT4', 'LSMEM2', 'USP27X', 'CYP2E1', 'HSD17B10', 'SSR2', 'DSC2', 'C11ORF58', 'DPY19L2P2', 'SPAG16', 'TXNDC9', 'SLC10A1', 'PARN', 'DNAJB6', 'S100A14', 'ANXA4', 'SNORD18A', 'SNCAIP', 'CRLF1', 'NIM1K', 'EBF4', 'MEX3A', 'MFGE8', 'MLXIP', 'DLG4', 'RSPO4', 'STAP2', 'GLI2', 'IL11', 'PAPSS2', 'SLC13A5', 'NKAP', 'TET1', 'ARNT2', 'KATNAL1', 'RNF141', 'PCSK7', 'CCDC18', 'TPCN1', 'MYOF', 'EVX2', 'XPA', 'KANK2', 'DBP', 'CRIPAK', 'ABHD16A', 'CNTNAP1', 'TOMM70A', 'MSH5', 'NLRC4', 'NMNAT1', 'LINC01312', 'SERP2', 'RPS5', 'RASSF6', 'CCL3L1', 'UBXN4', 'NTF4', 'SSX3', 'SETX', 'ATP11A', 'APMAP', 'GPR17', 'BRD8', 'TIAL1', 'OR8B3', 'GPR18', 'SSX4', 'ZSCAN32', 'TMC1', 'CST1', 'PRSS21', 'DNAJC3', 'LOC100240735', 'SMR3A', 'SHANK3', 'SMN2', 'CCDC170', 'OLIG3', 'RNF121', 'BAZ1B', 'NTRK2', 'INSRR', 'TLN2', 'VPS13A', 'SNORD88A', 'CCR10', 'PPP1R1A', 'CA14', 'NAA60', 'PPFIBP1', 'SERPINB6', 'EMX1', 'MAFG-AS1', 'MAGEA6', 'RAP1GAP', 'ARL8A', 'GUCA2A', 'MICALL2', 'PRLH', 'C14ORF166', 'POM121L2', 'DNAJC5G', 'RENBP', 'RNF207', 'C7', 'ZNF596', 'AFMID', 'RASSF2', 'KRTAP5-4', 'MLLT6', 'LRP1', 'TMEM138', 'CTAGE6', 'CNTN6', 'DCUN1D5', 'FBP2', 'DUSP11', 'PLET1', 'SOX14', 'PHLDB1', 'TRIM16', 'SNORA45B', 'DEFB116', 'PLCD1', 'ESRG', 'RTN4', 'SPAST', 'FAM155B', 'SGK2', 'PCDHGA7', 'MBLAC1', 'CLK3', 'ZFYVE27', 'RPS12', 'CGA', 'SDC2', 'MAP3K14', 'OR5AP2', 'HOMER1', 'MAST1', 'TFF1', 'DDOST', 'LINC00667', 'ZSWIM6', 'THAP7-AS1', 'ENPP5', 'PTGDS', 'CLASP2', 'NOX5', 'IL24', 'FAM196B', 'NTM', 'ACBD7', 'MYLK', 'ITFG3', 'HINT3', 'P2RY1', 'SLC27A1', 'CRELD1', 'DNAH5', 'MGAM2', 'ALDH3A1', 'SIX3', 'SDHAF1', 'NYAP1', 'HAL', 'SDHAF4', 'ESRRA', 'KCTD14', 'SPATA31E1', 'TOPAZ1', 'H2AFJ', 'SIX6', 'GZMH', 'C14ORF93', 'LILRB4', 'DALRD3', 'PHF10', 'TADA3', 'PDE1B', 'TCF4', 'SNORA81', 'C7ORF50', 'NECAB1', 'HRCT1', 'SLC26A10', 'EIF2AK1', 'SNORA5B', 'GRK7', 'KIAA1324', 'TXLNB', 'ZPLD1', 'ZP4', 'ZFAND6', 'FRG2B', 'TNK1', 'CLTC', 'VDR', 'ALDH1A3', 'SP6', 'RASAL2-AS1', 'SOX21', 'ZNF213', 'CLIC1', 'WAS', 'TTC39B', 'PDE5A', 'IGFBP3', 'OR52M1', 'SNORD50A', 'RPP40', 'MAP3K9', 'ZNF212', 'CDH12', 'PINX1', 'RPL34-AS1', 'FSD1L', 'PID1', 'KLHL5', 'UBTFL1', 'C1ORF123', 'RSBN1L', 'ATPAF1', 'ALKBH5', 'CYB561D2', 'OLFM1', 'CASQ1', 'FCGR1C', 'HIST2H3D', 'MXRA8', 'ZNF252P-AS1', 'HIGD1A', 'ZDHHC13', 'FAM169B', 'HBA1', 'HIPK4', 'NETO1', 'CBFA2T2', 'RSRP1', 'C20ORF27', 'CCL28', 'CYB5A', 'TINF2', 'SLC27A4', 'SNORA37', 'CDRT1', 'CAMK1G', 'TNC', 'ZNF648', 'SMAD2', 'DMRT1', 'ASMTL-AS1', 'CTU2', 'OR14A16', 'SNORA57', 'LGALS9', 'LUZP2', 'LOC652276', 'NPIPB5', 'LRRC47', 'ZNF639', 'MLLT4-AS1', 'MRPL11', 'MRPL53', 'MYEOV2', 'SMCO2', 'ALS2CR12', 'LOC388242', 'FOXL1', 'CCNG2', 'C19ORF54', 'COG7', 'MYO19', 'NOP58', 'ZNF311', 'EIF1', 'PGBD2', 'LINC00473', 'DPH6', 'ZNF502', 'HCP5', 'BPIFC', 'ZNF536', 'RUNDC3A', 'KIRREL3', 'ATP6V1E1', 'GAPDH', 'EMG1', 'CHIC1', 'SPG7', 'C12ORF71', 'UBE2U', 'FKBP4', 'PRR5-ARHGAP8', 'KIAA1107', 'SMPDL3A', 'OR52L1', 'ADAM12', 'SSH2', 'LINC00244', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 4.275971871431733e-15 NRMSE: 7.284821833197154e-16 MAPE: 4.460831360801263e-12 Pearson Correlation: 0.48463250783601924 Spearman Correlation: 0.31611616104938967 Coefficient of Determination: -2.3039409902629657 RMSE: 1.577233121637994 NRMSE: 0.348983985316516 MAPE: 1150.9221173070782 Predictor: ElasticNet Pearson Correlation: 0.7695672491145261 Spearman Correlation: 0.597438800668337 Coefficient of Determination: 0.28399981553280607 RMSE: 0.8697932324765124 NRMSE: 0.14818359242832044 MAPE: 800.189511510286 Pearson Correlation: 0.6656618123804133 Spearman Correlation: 0.5610568710333047 Coefficient of Determination: 0.23159284941558345 RMSE: 0.7606334958131703 NRMSE: 0.16830036415824104 MAPE: 499.4819979681201 Predictor: RandomForests Pearson Correlation: 0.8503845678322306 Spearman Correlation: 0.6822306929144959 Coefficient of Determination: 0.7188159206842208 RMSE: 0.5450731893212755 NRMSE: 0.09286218875262373 MAPE: 532.0551893509788 Pearson Correlation: 0.7927173152546398 Spearman Correlation: 0.6214098153658123 Coefficient of Determination: 0.6085687883780717 RMSE: 0.5428845393051064 NRMSE: 0.12012048662575647 MAPE: 278.60838004916695 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['ST3GAL2', 'CXCL16', 'OR51I1', 'EIF1AY', 'IARS2', 'SCARNA22', 'LIPH', 'PWRN1', 'MT2A', 'SLC1A1', 'OPN1SW', 'XXYLT1', 'SMAP1', 'MDC1', 'MARK2', 'SPATA31A5', 'PSMD10', 'TTC36', 'PRR14', 'SNAI2', 'CDC73', 'ZNF71', 'KIFAP3', 'CLVS1', 'HSBP1L1', 'LINC00663', 'P3H1', 'ATP5H', 'BPIFB1', 'DEFB109P1', 'MAP1LC3B', 'DOCK6', 'AGFG1', 'DOCK2', 'PPP1R14D', 'SUPV3L1', 'ATP6V1C1', 'UNC5CL', 'COL5A1', 'TMIE', 'DTX2P1-UPK3BP1-PMS2P11', 'KCNQ2', 'SUSD5', 'MFI2', 'PHYHIP', 'PILRA', 'OPN4', 'SAAL1', 'ICAM3', 'ERCC8', 'TRMT10A', 'IGF2-AS', 'ASB14', 'SNORD115-41', 'LPL', 'FAM210B', 'BOC', 'PCP4', 'STEAP2', 'FER1L4', 'RPS27A', 'NKIRAS1', 'APLNR', 'WDR86', 'TMEM169', 'DDX46', 'GAGE12J', 'TAGLN3', 'SUPT7L', 'PRNP', 'UCKL1-AS1', 'HKDC1', 'CNNM2', 'NLRP11', 'AICDA', 'MAP10', 'LINC01098', 'YWHAH', 'ELMOD1', 'YWHAG', 'PRKCDBP', 'FGF8', 'GAD2', 'ZG16', 'SLC26A8', 'KEL', 'ZMAT4', 'HSD17B7P2', 'HYAL3', 'SRR', 'TAF4B', 'METTL24', 'MCM4', 'MED30', 'WHAMM', 'FAM155B', 'RAB41', 'NEFL', 'FOXD3', 'CYP4Z1', 'CHN2', 'KIAA1614', 'BBS7', 'NME2', 'RYBP', 'TMEM126B', 'GXYLT2', 'BATF', 'SNPH', 'SCN4B', 'PLCD3', 'SLC12A9', 'AXIN2', 'ZNF526', 'CYP2B7P', 'GYS1', 'RBP2', 'PTDSS2', 'PYCARD', 'LOC284661', 'HDX', 'ANXA4', 'AGPAT5', 'CSF2RB', 'SLC1A4', 'CAPN11', 'NBPF1', 'RNF31', 'ADAM12', 'SOX11', 'IPO8', 'SALL1', 'ACSBG1', 'LCE4A', 'COMMD3', 'AMTN', 'ZNF646', 'SYNE1', 'MRPS12', 'STK38L', 'NUP88', 'NXF1', 'DEF8', 'ABHD16B', 'ODAM', 'NMB', 'PYCRL', 'MFSD6', 'C14ORF1', 'MRC1', 'VSIG10', 'PIP5K1B', 'FUOM', 'LDB1', 'ABCG1', 'STAU2', 'SCAND1', 'POLD4', 'NAALAD2', 'KLK6', 'CD19', 'SLC35B4', 'ZNF814', 'STEAP1', 'LIMD1', 'ZNHIT1', 'LYAR', 'LINC00320', 'RBM48', 'CACNA1H', 'CLUH', 'NLGN1', 'MMAB', 'SNORD94', 'PATE1', 'ZNF43', 'DDX6', 'SLC35F2', 'IDH1', 'NRIP3', 'ACPT', 'NYAP1', 'CDS2', 'DEFB128', 'TMEM43', 'MEGF9', 'LRRC17', 'TDRD7', 'PARP3', 'NCOR2', 'CABP4', 'SLC22A23', 'TMEM2', 'TMSB15A', 'LOC100133669', 'HHLA1', 'BTNL3', 'SLC4A1AP', 'FAM171A1', 'MROH6', 'ZNF282', 'CCAR2', 'RBFOX2', 'COPS5', 'HELZ2', 'ADCY3', 'HADHA', 'SHB', 'PSMD9', 'NIPSNAP3A', 'PRM3', 'MCU', 'LINC00473', 'ALPI', 'GNGT1', 'MIB1', 'ELFN1', 'CDC26', 'SDCBP', 'PTPRC', 'PRDX1', 'WHSC1L1', 'ZSCAN5A', 'SNHG4', 'GPR63', 'METTL22', 'ATP6V0C', 'CTSL3P', 'ZNF644', 'DSCR4', 'TRIM37', 'USP38', 'CYP2E1', 'SYT3', 'ALKBH8', 'ANKZF1', 'UNK', 'DEDD', 'KHDRBS2', 'GALNT14', 'SCCPDH', 'ZNF738', 'CLEC3B', 'SCARNA14', 'KHSRP', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.7515086701985346 Spearman Correlation: 0.7469364832527687 Coefficient of Determination: 0.5647652751835596 RMSE: 0.30935095319873057 NRMSE: 0.08348494339415258 MAPE: 229.44316175425982 Pearson Correlation: 0.2310236344419644 Spearman Correlation: 0.20766593099664588 Coefficient of Determination: -0.9575248223586617 RMSE: 0.5833885159062409 NRMSE: 0.28226109225012136 MAPE: 368.13362939892465 Predictor: ElasticNet Pearson Correlation: 0.3919505271440876 Spearman Correlation: 0.42206674131718686 Coefficient of Determination: 0.04532572670691004 RMSE: 0.4581601362435445 NRMSE: 0.12364427083299676 MAPE: 240.9789385160921 Pearson Correlation: 0.543531284713805 Spearman Correlation: 0.5694110899138394 Coefficient of Determination: 0.014308022121228059 RMSE: 0.4139756987066008 NRMSE: 0.2002940231012564 MAPE: 230.47196553963286 Predictor: RandomForests Pearson Correlation: 0.5542523491778176 Spearman Correlation: 0.5753568405911594 Coefficient of Determination: 0.2764271990876589 RMSE: 0.3988694793584602 NRMSE: 0.10764342427774619 MAPE: 246.2387419365189 Pearson Correlation: 0.5500555911186751 Spearman Correlation: 0.5587059174132667 Coefficient of Determination: 0.2561578938028293 RMSE: 0.35962064536855526 NRMSE: 0.1739953965321724 MAPE: 222.41288128008003
TMM
random_genes.clear()
scenario = Scenario.NRandomGenes_Mutations
normalizeTechnique = NormalizeTechnique.TMM
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12.2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 6.676054 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SH-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SJ-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SK-01 | 6.676054 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SQ-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 371 x_train columns: ['FAM189A1', 'IPO7', 'DLL3', 'ABRACL', 'HIRIP3', 'CAGE1', 'GDAP1', 'UTRN', 'EFCAB10', 'TMEM223', 'SSMEM1', 'CCM2', 'GLT8D1', 'PLEKHG7', 'PATE3', 'MAPT.IT1', 'IGF2.AS', 'ZBED4', 'DDX3X', 'DENND2C', 'BTBD2', 'SEC11A', 'GMDS', 'OR8K3', 'ZNF541', 'CCDC102A', 'SPR', 'EPOR', 'ZNF30', 'NANS', 'FLJ30679', 'ACE2', 'TNFAIP8L3', 'MYLPF', 'COL15A1', 'MIAT', 'MLEC', 'UBR3', 'EMC2', 'TMEM196', 'MAP4K2', 'YIF1A', 'IKBKG', 'PTPN20', 'PCP4', 'DOCK9', 'ANTXR2', 'C11ORF68', 'GCNT3', 'PFKFB1', 'FHL3', 'TRA2B', 'SGSM1', 'PRIMA1', 'EDF1', 'SLC4A2', 'GCK', 'POLR3B', 'ZBTB11.AS1', 'ETNPPL', 'LY6E', 'CELP', 'GAK', 'HOMEZ', 'PARVB', 'UGT3A1', 'TUBD1', 'HIPK1', 'CDHR5', 'FGR', 'YJEFN3', 'OR2W1', 'IGFBP3', 'MGARP', 'BRWD1', 'DIS3L2', 'CAMTA1', 'PPIL3', 'C19ORF66', 'IGFBPL1', 'BDNF', 'LINC00917', 'TSPAN14', 'QKI', 'TPBG', 'GP5', 'PITPNA', 'ACVR1C', 'GDF2', 'FAM83C', 'KIAA0101', 'TCL6', 'GLT1D1', 'CLK1', 'KIR2DL1', 'DEFB113', 'GAA', 'CCSAP', 'NABP2', 'ANKRD34B', 'RINT1', 'LCE1A', 'TOE1', 'CD72', 'KIFC3', 'RELL1', 'CPB1', 'LOH12CR2', 'FAM26D', 'GLUD2', 'SMAD2', 'BTG1', 'PSG4', 'BEND2', 'MTHFD2', 'TNPO1', 'EHF', 'ZNF234', 'TRRAP', 'MCAM', 'POLE2', 'GABRA3', 'JADE2', 'EME2', 'MS4A1', 'KLF4', 'SENP2', 'INF2', 'LDAH', 'ZNF468', 'DDX17', 'CNR2', 'GPR155', 'PLIN4', 'CCDC14', 'NLRP1', 'MKS1', 'PPP3CC', 'HAAO', 'RRP8', 'TMEM204', 'SH2D1B', 'CDH7', 'PPIL1', 'ZNF284', 'PDGFRL', 'MPP6', 'TNKS', 'MYL1', 'NR2C2', 'EPHA4', 'TPMT', 'DUSP16', 'NOL11', 'SPRY2', 'SLC22A8', 'PALLD', 'CFAP70', 'SNAPC3', 'KLHDC1', 'EIF2A', 'GTDC1', 'TRIM36', 'CNIH1', 'DCD', 'NDUFAF2', 'C17ORF74', 'PIF1', 'G6PC', 'DUX4L2', 'TMEM87B', 'C3P1', 'GALNT12', 'GPR37', 'SH2B3', 'CCDC186', 'P3H1', 'NDUFS4', 'NPC1L1', 'RAI2', 'SPRR2A', 'SERINC4', 'NFYB', 'RBM38', 'RAB11B', 'EMX2OS', 'TROVE2', 'TAF5', 'OR11A1', 'CPXCR1', 'C12ORF4', 'CXORF40A', 'ANKRD20A9P', 'BRCA1', 'C1QTNF9', 'FGF23', 'TTC4', 'CSPP1', 'STX1A', 'ZFAS1', 'OR2G2', 'SPAG17', 'EIF2S1', 'KRTCAP3', 'C3ORF79', 'FUZ', 'AP3D1', 'CNBP', 'POM121L12', 'SLCO1C1', 'SGIP1', 'LINC01001', 'PNPO', 'GPR26', 'COMTD1', 'GFM1', 'OR5I1', 'LINC01550', 'CSTF1', 'ZNHIT2', 'ARHGEF16', 'RAB27A', 'CTNNA2', 'MRPL54', 'MS4A13', 'PQBP1', 'ISOC2', 'FGF14', 'HPN.AS1', 'CDK15', 'ARHGAP39', 'TUSC3', 'CFAP97', 'EGR3', 'C3ORF62', 'DNAL1', 'ABCG5', 'NFIC', 'MNDA', 'SDHAP2', 'ZNF510', 'PARP9', 'IL36A', 'MRPS10', 'ZNF764', 'ARHGAP9', 'ZNF586', 'STON1.GTF2A1L', 'SH2D6', 'FLNA', 'DDX4', 'YWHAE', 'MRPL3', 'ARHGAP29', 'SLC6A11', 'MARVELD2', 'ATOH8', 'VEGFA', 'C6ORF120', 'MBIP', 'PREX2', 'PGS1', 'MYO3B', 'PRKCA', 'PRR35', 'PWAR4', 'HSP90B3P', 'KCNS2', 'RBP5', 'STK32B', 'LOC100130987', 'PTENP1', 'SNX14', 'PVRL4', 'FAM86C2P', 'INPP5F', 'USP22', 'CEACAM22P', 'HDDC3', 'STON2', 'DHRS2', 'ERCC6L', 'RHOXF1', 'TADA2A', 'INE2', 'HDAC3', 'NOS3', 'BCL6B', 'GKN2', 'CHRM3', 'MOB3A', 'CCDC53', 'TNXB', 'MAPKAP1', 'TUBGCP2', 'PGBD1', 'TAS2R5', 'ZRANB2', 'ARHGEF38', 'METRNL', 'KIF18A', 'PCGF5', 'SPTY2D1', 'PCGF6', 'BTBD17', 'SPNS2', 'CPEB1', 'COL6A1', 'ZNF180', 'PON1', 'LINC01106', 'TMIE', 'SLC25A52', 'MYOCD', 'DHRS3', 'NAPB', 'ADNP', 'GGT6', 'ANP32AP1', 'GOLGA7', 'NDUFC1', 'B3GALT2', 'L3MBTL3', 'GLIS2', 'RBMY1A3P', 'KCTD13', 'PCDHGB7', 'DOCK10', 'OR13C3', 'WDR92', 'TRANK1', 'SFTA1P', 'SNORD88A', 'CSF3R', 'LARGE', 'MTG2', 'OBSL1', 'ENAM', 'KIF1A', 'KLRC1', 'FAM50A', 'COL9A3', 'KIAA2013', 'MOB1A', 'GPR65', 'ITGA4', 'OR9A4', 'RAB11FIP1', 'WDR38', 'CNGA3', 'CDH11', 'CPN2', 'ESF1', 'ATP4A', 'ANKRD26P1', 'MACF1', 'GLDC', 'RAB11FIP5', 'TAAR9', 'GBP3', 'ASIC2', 'GAST', 'OR51T1', 'NEU3', 'GTPBP10', 'TREML3P', 'KCTD17', 'MPHOSPH10', 'APOBEC3F', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.48989936511568216 Spearman Correlation: 0.44837142355094495 Coefficient of Determination: 0.21896794226270277 RMSE: 0.1980523647241076 NRMSE: 0.07500562951111818 MAPE: 800.1653032919958 Pearson Correlation: -0.09762512111156195 Spearman Correlation: 0.06316757975020182 Coefficient of Determination: -1.8736420465327494e+25 RMSE: 1214014632414.29 NRMSE: 599741448557.8665 MAPE: 79633784909191.88 Predictor: ElasticNet Pearson Correlation: 0.30889733879411374 Spearman Correlation: 0.30421028665995425 Coefficient of Determination: 0.055133444622776584 RMSE: 0.21783659535943928 NRMSE: 0.08249823721243675 MAPE: 234.55609929300758 Pearson Correlation: 0.2273573562890274 Spearman Correlation: 0.21254018050269763 Coefficient of Determination: -0.00940763351252727 RMSE: 0.2817824246014046 NRMSE: 0.13920474679330144 MAPE: 133.4031882891612 Predictor: RandomForests Pearson Correlation: 0.4669121531915981 Spearman Correlation: 0.385888001601312 Coefficient of Determination: 0.09880654058380822 RMSE: 0.2127426759961948 NRMSE: 0.08056908767134816 MAPE: 216.08828351975023 Pearson Correlation: 0.2119352916906011 Spearman Correlation: 0.19228147532142298 Coefficient of Determination: -0.010582034886085667 RMSE: 0.2819462976776042 NRMSE: 0.13928570255238001 MAPE: 140.93807026263033 Protein: CDH1 x_train_column_count: 836 x_train columns: ['CHID1', 'ZFHX4.AS1', 'AMBN', 'NUDT5', 'CETN2', 'PBX4', 'PM20D1', 'CCDC71', 'BSG', 'SLC17A8', 'TNFRSF10B', 'PPIE', 'HNRNPH3', 'NMRAL1', 'ARL4D', 'WIBG', 'PGBD5', 'DUSP5', 'TATDN1', 'SNX8', 'SF1', 'SORD', 'SIRPB1', 'KDM5B', 'MRPS16', 'NKX2.4', 'GPR18', 'FBXO15', 'CYHR1', 'SUPT16H', 'TBC1D29', 'ZNF23', 'JUN', 'HSPA9', 'AQP4.AS1', 'TMEM169', 'TSPAN8', 'RPS27', 'HS3ST6', 'RMDN1', 'ABCF1', 'USH1G', 'SFT2D1', 'ZNF202', 'SEPHS1P1', 'TBX15', 'TMEM176A', 'STARD8', 'ELSPBP1', 'RTP4', 'SLC39A5', 'GCLC', 'CAPN15', 'LRRC28', 'SEMA5B', 'SAMSN1', 'CDH4', 'FAM197Y2', 'CPO', 'PI4KAP2', 'PLEKHO2', 'PUM2', 'SCG5', 'OR9G4', 'CORO6', 'MED30', 'C1ORF185', 'LINC01106', 'CXCR3', 'MAN2B1', 'FAM168A', 'SYNJ2', 'LINC01559', 'RAC2', 'FAM47A', 'RABEP2', 'LOXHD1', 'CAMSAP2', 'CDK2AP2', 'TRIM58', 'BNIP1', 'IQSEC1', 'CKMT1B', 'CATSPER1', 'SLC10A7', 'RHOBTB3', 'SOGA3', 'SNCG', 'ERI2', 'KRTAP12.3', 'IMPDH2', 'OR2D2', 'LPCAT1', 'MEP1A', 'FAM134B', 'ZNF227', 'ZDHHC23', 'ELF5', 'NLRP5', 'ATF5', 'OR13C3', 'MAN2A2', 'ARMCX2', 'YWHAE', 'ACER1', 'FRMPD4', 'PCDHGB2', 'DIO1', 'PEAR1', 'MALSU1', 'ANGEL2', 'LAMP1', 'METTL17', 'CLDN10', 'NCF4', 'YTHDC1', 'MYOF', 'CHRNA3', 'RBM17', 'TARDBP', 'CNIH2', 'IBA57', 'MPST', 'MRPL42P5', 'NAALAD2', 'SNORD114.22', 'UFL1', 'TTLL6', 'RPLP1', 'GRIN2D', 'TBC1D10A', 'PROS1', 'ITPKC', 'LINC00326', 'TYMP', 'NKAIN4', 'GALT', 'ADAMTS18', 'CNBD2', 'DNAI1', 'MMS22L', 'FAM118B', 'ATP1A2', 'ZNF25', 'RASA1', 'C9ORF64', 'STX12', 'C10ORF55', 'SLC26A3', 'B3GNT9', 'KLHL5', 'KLF13', 'COMMD4', 'PRSS23', 'GRK4', 'CNPPD1', 'TBL3', 'HGC6.3', 'LDLRAD2', 'MTCP1', 'RGS13', 'TEDDM1', 'MYO1F', 'F2R', 'WNT10A', 'C5ORF46', 'DSC2', 'P3H3', 'CGN', 'MYT1', 'PTP4A2', 'MOCOS', 'SSX2', 'MAP3K14', 'DOCK9', 'MIR143HG', 'SLC15A4', 'C2CD3', 'NXPE3', 'E2F1', 'C20ORF24', 'PCDHGA11', 'OR8G2', 'C2CD2', 'CRYBB2', 'AMBP', 'PER4', 'CCDC9', 'WIPI1', 'ANK2', 'NOS2', 'ZNF831', 'VMAC', 'LOC154449', 'MMP16', 'HSPA1L', 'SLC38A3', 'ANKRD20A4', 'C5ORF47', 'SRBD1', 'CAPN1', 'FAM210A', 'GULP1', 'HLA.DRA', 'PLA2G2D', 'DEFB118', 'VHL', 'SMU1', 'OR10G9', 'ACOT6', 'FAM138D', 'KLK10', 'EXT2', 'AP2B1', 'ABCD1', 'MRPS34', 'YBX1', 'N4BP2L2.IT2', 'PRRT1', 'SNORD115.1', 'SLC6A17', 'HSD17B10', 'PMCHL1', 'TNIP2', 'C1QBP', 'HYALP1', 'PRB1', 'GOT1', 'TMEM181', 'WDR63', 'PPBPP1', 'FAM195A', 'SNAI3.AS1', 'MZF1', 'SNORD70', 'CAPS2', 'CARD8', 'ZNF557', 'SIDT2', 'ENDOG', 'SMO', 'MOSPD2', 'MAPKAPK5', 'CEP135', 'ZBTB40', 'ARID3B', 'EIF5', 'HMOX2', 'SYTL1', 'ABCB11', 'BOD1L1', 'PRKCB', 'SNORA14B', 'ULK4P3', 'SEC16B', 'SLITRK1', 'KRT222', 'SPAG17', 'HENMT1', 'PLEKHA4', 'LINC01098', 'MCF2L2', 'TCEAL4', 'SON', 'SCMH1', 'TMEM211', 'GZF1', 'GALR3', 'TERT', 'S100A16', 'CBWD1', 'ATF6', 'EOMES', 'RASSF8', 'MTMR11', 'PKP4', 'FHL1', 'FAM20B', 'KLHDC8A', 'AADACL4', 'ITGA8', 'GNGT1', 'ZBTB8OS', 'MSTO2P', 'MBP', 'CMTM8', 'SRRD', 'STYX', 'CRYGB', 'AGTPBP1', 'YWHAB', 'COX16', 'APMAP', 'CHKB.CPT1B', 'VPS72', 'PPP1R14B', 'METTL7B', 'ZNF823', 'TTC27', 'SNORA9', 'TM7SF3', 'RWDD2A', 'BTBD1', 'TMEM38A', 'AMOTL1', 'PTF1A', 'LRTOMT', 'CREB3L1', 'TXK', 'HMG20B', 'AGER', 'SLED1', 'ARHGEF11', 'VPS26B', 'TEAD4', 'WARS', 'KIAA0922', 'CXORF21', 'HERC5', 'TEX12', 'CCDC81', 'LMNTD2', 'CENPL', 'RAB3IL1', 'TAF1L', 'TAS2R10', 'ARPP21', 'CEP44', 'MFSD11', 'DDX21', 'ITIH5', 'DCAF7', 'WNT2B', 'TTLL7', 'SEMA7A', 'ZNF773', 'ARL16', 'FCF1', 'LINC00298', 'FARP1', 'TNFAIP8L3', 'RNF41', 'DLEU7', 'MYBPC2', 'CACNA1C', 'CDKL4', 'CAPZB', 'STX10', 'TPRN', 'LINC00597', 'LMOD2', 'POU4F3', 'MRPL17', 'ADAMTS6', 'UBE2Q1', 'BMP8B', 'FCGR3A', 'OBP2A', 'NNMT', 'TMEM132C', 'TREML1', 'SMOX', 'NEK4', 'ZNF706', 'ASPRV1', 'VTRNA1.3', 'EHF', 'CHD1', 'CRCP', 'SAMD1', 'SLC6A19', 'C19ORF52', 'SLC48A1', 'PCSK1N', 'PSMD12', 'P2RX4', 'AIF1L', 'ZNF493', 'OR3A2', 'NEDD4', 'SPZ1', 'GRIA3', 'AS3MT', 'MS4A15', 'FAM114A2', 'MVB12A', 'ZNF567', 'FKBP7', 'RAB26', 'CTDSP2', 'ACOT4', 'TDRD3', 'GATAD1', 'TRIM16L', 'ARHGAP10', 'KRT76', 'LINC00304', 'SNORD45A', 'ZNF839', 'BHMT', 'AGPAT1', 'ANKFN1', 'ZNF252P', 'EGLN1', 'EVX2', 'GNAL', 'CCDC108', 'SV2B', 'WFDC9', 'SGSH', 'PRRG2', 'HACE1', 'FBXW8', 'C19ORF80', 'ODF3', 'KRT72', 'IL20RA', 'FUBP3', 'TMEM189.UBE2V1', 'ASAP1', 'KCNQ5', 'HIST1H1T', 'ASB17', 'H1FNT', 'MAP3K1', 'FAM19A1', 'SNHG3', 'PGAM1', 'AGMAT', 'APOL5', 'TUBB4A', 'DYNLT1', 'CCM2', 'FRRS1L', 'UTP3', 'ITGB1BP2', 'GRTP1', 'AFMID', 'FYTTD1', 'NCALD', 'PLAGL2', 'BHLHA15', 'CTSG', 'CHRNB3', 'EMC4', 'CISH', 'STXBP2', 'FZD2', 'STK19', 'MCM2', 'NAT2', 'KIAA1429', 'SPATA6L', 'CNIH3', 'RSPH3', 'SNORD116.13', 'TRIM61', 'NGRN', 'NDP', 'FAM110D', 'TENM1', 'CXCL8', 'USP51', 'ZNF559', 'SIAH3', 'DOC2A', 'ERCC2', 'KRBA1', 'CHRD', 'ZDHHC8P1', 'NDUFAF2', 'TMEM260', 'ALS2', 'RMI2', 'CDH6', 'OXCT2', 'SERPINA4', 'LPAR3', 'MKRN1', 'TMPRSS9', 'TRPC3', 'TWF2', 'PKP1', 'HCG4B', 'CUL9', 'ATG9B', 'ARHGDIG', 'ATP5G2', 'SPIB', 'ASCC2', 'IGFBP2', 'YWHAQ', 'FAM167A.AS1', 'ARHGEF33', 'ARID5A', 'CELF5', 'MYCBP2', 'MYLPF', 'DHRS4', 'HEPACAM2', 'HIST1H2BK', 'SNORD65', 'CLP1', 'ADGRE4P', 'AOC2', 'UBL5', 'PSME3', 'ICOSLG', 'KIF4A', 'SOX1', 'DIDO1', 'RAPSN', 'USH1C', 'SLC4A4', 'DNAJC14', 'ABL1', 'WDFY3.AS2', 'SLC45A3', 'NUP188', 'HOXD10', 'CORIN', 'KLRB1', 'OR14C36', 'AKR1B15', 'SMPD1', 'UBR7', 'TDGF1P3', 'SLC26A2', 'FAM3A', 'FAM105A', 'LRRC8A', 'ARHGAP11A', 'SLC6A9', 'SFRP1', 'RBSN', 'OMA1', 'VEGFB', 'TCTA', 'KRT9', 'ZNF271P', 'XPO4', 'LMOD1', 'ZP2', 'FBXL3', 'THOC6', 'ARHGEF15', 'OGFRL1', 'RGS22', 'FAF2', 'OLFML3', 'AK4', 'HCN4', 'SNRNP25', 'KCNMB3', 'LINC00301', 'WEE2.AS1', 'GPM6B', 'HFM1', 'CRP', 'ARHGEF2', 'IGF1', 'FAM150A', 'OTOA', 'WDR4', 'STUB1', 'MRPL3', 'NCK1', 'SERINC4', 'OCEL1', 'IFNW1', 'CEP68', 'OR5R1', 'FDCSP', 'NMNAT2', 'PNPLA5', 'SLC2A3', 'DAPK2', 'GFI1', 'HIST1H2BM', 'IFT80', 'BCORP1', 'OR6C4', 'GNL3', 'CRAMP1L', 'MAGEA10', 'ARPP19', 'KLHL10', 'PRAM1', 'PPP1R3D', 'LILRA6', 'FRG1B', 'HAUS7', 'ALPL', 'SRP14', 'CCDC66', 'FGF17', 'C2ORF47', 'NME1', 'GPR149', 'KCNU1', 'GPX7', 'CPTP', 'LGALS1', 'PCDHGC4', 'KIF6', 'KIF22', 'HMHA1', 'C6ORF201', 'DNAJC3', 'RGAG1', 'MGC16275', 'COMMD8', 'LINC00238', 'PMS2', 'SPATA7', 'CACNA1H', 'CLNS1A', 'KRTAP9.8', 'KCND2', 'NECAB2', 'RFX7', 'TRPC6', 'GDI1', 'TCF21', 'SLC46A1', 'FAM182B', 'ATP6AP1L', 'KCNJ4', 'ZNF738', 'PHYHD1', 'PIGU', 'DRAXIN', 'SNRPE', 'ECEL1', 'LINC00475', 'PPIP5K2', 'MIF', 'ANKMY2', 'TSTD1', 'DLEU1', 'SPATC1L', 'ZFAND5', 'SF3B5', 'KHK', 'RNF181', 'ALG9', 'NEXN', 'DPP8', 'MEMO1', 'ASXL2', 'CHRNA1', 'GAS2L2', 'PGLYRP3', 'TBRG1', 'CDH8', 'TMEM41B', 'SAMD8', 'RGR', 'KLRC4', 'LINC00923', 'FAM76A', 'SF3A2', 'ROBO1', 'ASMT', 'OR6N2', 'TMEM185B', 'GPR88', 'ISOC1', 'ZFAND2B', 'MAP3K2', 'DPY19L2P2', 'IL21', 'TNFAIP2', 'ST13P4', 'OR7C2', 'MPI', 'FBLIM1', 'MCF2', 'PDCD10', 'ERCC6L', 'SIGLEC16', 'IL17RC', 'OR8G5', 'TRIM37', 'TEX40', 'KDELC2', 'THAP9', 'FAM50B', 'MSH2', 'CX3CL1', 'MYL6B', 'CD27.AS1', 'TRMT10C', 'CYTH1', 'STMN4', 'ASIC4', 'OR5W2', 'GIPC2', 'SUSD5', 'SHROOM2', 'SPANXN4', 'KIAA1549L', 'DNM2', 'TTTY22', 'ZNRD1.AS1', 'SNORD91A', 'GUCA2B', 'INO80C', 'TIGD7', 'STON1', 'FTHL17', 'IRAK1BP1', 'SARS2', 'PIDD1', 'SCNN1D', 'LCN1', 'DIRAS3', 'OR8S1', 'FANCG', 'GTSE1.AS1', 'NFATC1', 'DCX', 'SMARCD2', 'MUC5B', 'RIPK4', 'TMCO3', 'SLX1B', 'SLC35B3', 'EPN2', 'TPX2', 'EAF1', 'ERGIC1', 'NLRC4', 'LRRC29', 'C12ORF49', 'WDR13', 'DEPDC5', 'HEPHL1', 'CDC42SE1', 'KLHL6', 'UBP1', 'DUSP9', 'RPS6KA1', 'OLAH', 'IL1B', 'EVI2A', 'SKAP1', 'C8ORF44', 'ATF3', 'CELA2A', 'LOC642929', 'CYP2U1', 'CCDC25', 'TPP1', 'RAVER2', 'AP3S2', 'CLPSL2', 'FAM69B', 'SPSB2', 'CAMKK1', 'FAM89A', 'NXF4', 'SNORD115.8', 'ZNF322', 'STYXL1', 'CST1', 'C17ORF104', 'SSX1', 'METTL22', 'SYCE1', 'ZIC3', 'UAP1', 'LOC100190986', 'KRTAP5.11', 'PLOD3', 'ZNF641', 'MTHFS', 'ADAMTSL2', 'PYGO1', 'ING1', 'LOC100133050', 'ATP1B1', 'ZCCHC13', 'PDHX', 'ZNF207', 'WDR7', 'TRANK1', 'KIAA1147', 'BORA', 'LRP2BP', 'SNORD121A', 'ZNF112', 'GNB3', 'KRTAP23.1', 'ANKHD1', 'MPV17L2', 'ACTRT2', 'JPH2', 'DDX1', 'KRTAP10.4', 'GPR176', 'CES5A', 'GOLGA8A', 'CD46', 'ABHD6', 'TBX2', 'TTPAL', 'MRTO4', 'GPR3', 'ITPR1', 'C1S', 'MBOAT7', 'TMEM161B', 'PER3', 'LRIT3', 'C5ORF58', 'NF1', 'PLCZ1', 'POLA1', 'C9ORF173', 'LRRC43', 'DEFB132', 'OPLAH', 'SUPT20HL1', 'NME1.NME2', 'CDV3', 'GALNT14', 'DKFZP434H168', 'ZNF503', 'RSG1', 'NUDT1', 'SNAI2', 'ZBED8', 'IL27RA', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 0.8352419152965339 Spearman Correlation: 0.7943703843284873 Coefficient of Determination: 0.5540700441383403 RMSE: 0.7535438422139584 NRMSE: 0.1266609251868217 MAPE: 481.33151790845386 Pearson Correlation: -0.02157832756053998 Spearman Correlation: 0.4005874099500064 Coefficient of Determination: -9.836377288579638e+25 RMSE: 11507735465011.03 NRMSE: 1863842354476.86 MAPE: 380866981279766.9 Predictor: ElasticNet Pearson Correlation: 0.7173685130162253 Spearman Correlation: 0.6875410904192252 Coefficient of Determination: 0.4826636685152529 RMSE: 0.8116367272577509 NRMSE: 0.13642558406161245 MAPE: 461.19958627905123 Pearson Correlation: 0.6250552391346729 Spearman Correlation: 0.5568627450980393 Coefficient of Determination: 0.37553229530472787 RMSE: 0.9169111887454476 NRMSE: 0.14850688166004464 MAPE: 313.13481315019527 Predictor: RandomForests Pearson Correlation: 0.6131412756858923 Spearman Correlation: 0.5285090946941782 Coefficient of Determination: 0.373222604431542 RMSE: 0.8933710279450148 NRMSE: 0.15016405761098192 MAPE: 235.80393411487148 Pearson Correlation: 0.6323499853637722 Spearman Correlation: 0.47663387296378595 Coefficient of Determination: 0.3920825687326627 RMSE: 0.9046791451108696 NRMSE: 0.14652572723767768 MAPE: 161.7757653609928 Protein: CDH2 x_train_column_count: 474 x_train columns: ['PSMG1', 'SMR3B', 'LY6K', 'CEBPB', 'CHST8', 'NANS', 'NDUFB6', 'TMEM159', 'CLTCL1', 'GLT6D1', 'VCP', 'SLC9A3R2', 'FBXL3', 'CDH12', 'USB1', 'PSMD5', 'PHF20L1', 'IFIT1B', 'KRBA1', 'OGN', 'PROM1', 'ASPM', 'SCMH1', 'DEFB105A', 'NCF1', 'C10ORF10', 'CDKL4', 'VLDLR', 'RAB40A', 'TM6SF2', 'ZNF567', 'SKP1', 'ZNF839', 'ADD2', 'SNORD57', 'C9ORF163', 'RASA1', 'PTBP2', 'ANAPC15', 'TMEM145', 'RAB22A', 'KIF20B', 'KIF3C', 'GDF6', 'DNHD1', 'RNY5', 'SNX5', 'ZNF366', 'DCAF5', 'GLMN', 'GSTK1', 'DFNA5', 'GIMAP7', 'SEBOX', 'NPPC', 'SLC22A10', 'SQSTM1', 'PRDM14', 'C9ORF142', 'JAG1', 'FLG2', 'SLC34A3', 'CYMP', 'R3HDM1', 'FAM98C', 'SLC12A6', 'SEC1P', 'UBXN4', 'HYLS1', 'CYP1B1.AS1', 'CD177', 'DNAI1', 'TMEM140', 'DEFB115', 'ARL10', 'MED28', 'TIGD7', 'LURAP1L', 'C10ORF88', 'SCARNA12', 'SNAPIN', 'CST4', 'CPEB3', 'OLIG1', 'SNORD58C', 'HIST2H4A', 'ORC6', 'PROSER2', 'UBE2A', 'GUCY1B3', 'PGAP2', 'TEDDM1', 'FOXO1', 'GNMT', 'SNORA26', 'ARL13B', 'C2CD2', 'GTF2H4', 'SLC38A8', 'CLSTN3', 'PTPRU', 'GCKR', 'GDF10', 'E2F4', 'SLC7A6OS', 'NAP1L6', 'AKAP3', 'GFPT1', 'ZCCHC24', 'SNORD78', 'RBFA', 'TAF13', 'TMEM97', 'ADPRHL2', 'FTH1P3', 'OLR1', 'NAPSA', 'AP4S1', 'ALDH1A2', 'SMUG1', 'MRPL40', 'CFH', 'NUDT7', 'MRPS36', 'FAM81A', 'TM4SF1', 'SCAMP4', 'KIAA0125', 'KLK5', 'MT1M', 'FAM66C', 'MT1B', 'MEFV', 'CTHRC1', 'PHYHD1', 'LYPD3', 'AK2', 'NLN', 'MBTPS2', 'LYPD6B', 'SMAP1', 'UGT1A8', 'DUSP5P1', 'DPH3', 'MRPS15', 'ZNF98', 'C6ORF10', 'ATP13A5', 'CDC42BPG', 'BICC1', 'TMPRSS12', 'SASS6', 'TOR1B', 'PAQR8', 'KANK4', 'FOXQ1', 'POLE', 'LRRC14B', 'CEP170B', 'HIST1H2AA', 'PCDH15', 'LCE3A', 'OR4A16', 'HLA.DQA1', 'EIF4E', 'GPR20', 'CTAGE9', 'PRRT3', 'TUBB', 'KRCC1', 'TBC1D2', 'TRIM42', 'AGPAT4', 'CA4', 'EXOSC5', 'NOS1AP', 'JRK', 'DDIT3', 'HSPBAP1', 'MYOC', 'RBCK1', 'EGLN2', 'FBXL15', 'DEPTOR', 'CHP2', 'IL6ST', 'CDC42SE1', 'CDRT4', 'GLIPR1L1', 'MAP3K15', 'KRT39', 'SOCS5', 'MMADHC', 'PAAF1', 'PLCG2', 'SLC6A18', 'OR6C65', 'SBK2', 'SLC22A5', 'ADRA2C', 'VDAC3', 'SNORD116.1', 'SMIM15', 'CXCL8', 'KIT', 'ZFYVE9', 'LOC493754', 'MIF4GD', 'SFT2D3', 'MYOM3', 'GPR101', 'NAT8', 'OR8K5', 'ADAM15', 'PPP5C', 'GPR119', 'ACAD9', 'NPHS2', 'STAT1', 'LOC646214', 'TUBGCP2', 'OR2T6', 'RASGRF2', 'RTCA', 'TGIF2', 'FABP4', 'PCSK1N', 'ATP5J', 'OR2B3', 'VSIG1', 'LOC90246', 'FIBIN', 'CACTIN', 'CCT6P1', 'ZCWPW1', 'NUBPL', 'MEP1A', 'SMAGP', 'CDC16', 'RELT', 'ASAP1.IT1', 'CCDC28B', 'FAM184B', 'YBEY', 'SNORA78', 'TBC1D3P2', 'COLQ', 'ABCC2', 'ACTR3C', 'CYR61', 'GUSBP1', 'INPP4A', 'CERS4', 'MRE11A', 'LHX9', 'NPAS2', 'ASMTL.AS1', 'PIN1P1', 'COPRS', 'ZRANB3', 'KCNT2', 'SEMG2', 'DUSP27', 'FIGNL2', 'SBSN', 'DDX43', 'PSMG2', 'OR1A2', 'PATE3', 'CDC25B', 'NOLC1', 'HERPUD1', 'SNORD115.48', 'PPP1R3G', 'DVL2', 'VPS37A', 'ATP12A', 'DSTN', 'OGFRL1', 'ZCCHC3', 'CEACAM19', 'CSN1S1', 'GALNT1', 'SPSB4', 'OR6B3', 'SYCE2', 'CAPRIN2', 'PRIMPOL', 'GLYCTK', 'TBX4', 'ARSG', 'THUMPD1', 'NT5DC3', 'N4BP2L1', 'TAF10', 'NADSYN1', 'LZTR1', 'OSGIN1', 'STAM', 'WFDC11', 'GTF3C5', 'HIGD2A', 'SNORD51', 'COL6A6', 'ATG101', 'RPL31P11', 'SLC11A1', 'CYP4Z2P', 'KRI1', 'ABCB9', 'INADL', 'SH2B1', 'HEATR6', 'TMEFF2', 'FAM224B', 'PTGER1', 'ZNF826P', 'WDR54', 'SHH', 'COL18A1', 'SLC9A3R1', 'ACPT', 'GLTSCR2', 'ZNF814', 'GALK1', 'CRYM', 'KRTAP4.8', 'DKFZP434A062', 'MCTP2', 'APBA1', 'GOLGA6L9', 'VGLL4', 'RPS6KA4', 'MTG1', 'TMEM161B', 'RXFP1', 'SLC7A2', 'EIF4A2', 'VWA8', 'DCD', 'WWP2', 'LMTK3', 'IL20RB', 'DMRTC2', 'ANO8', 'NPY5R', 'HOXD10', 'EOGT', 'RAB3IL1', 'GOLM1', 'PRKX', 'NCAPH', 'TMEM45B', 'MSH2', 'PCDHGB2', 'NUP107', 'ATP1B3', 'IFNAR1', 'KCNMB2', 'AARS', 'THNSL2', 'SMYD3', 'HNRNPA2B1', 'ABCC10', 'PPP1R14D', 'PAPSS2', 'ANP32B', 'CENPU', 'KRTAP27.1', 'WDR60', 'GATS', 'DNAJC21', 'ARSA', 'SLC2A2', 'CA2', 'ARL8A', 'TIE1', 'FITM1', 'SNORA81', 'PSMD1', 'UBE2W', 'PIGQ', 'METTL10', 'CALCR', 'DAND5', 'DIP2A', 'AIMP2', 'CDH3', 'ATG5', 'NPDC1', 'ZGPAT', 'LILRA1', 'DMRTC1B', 'RSBN1L', 'UBL4A', 'RAD51AP1', 'TAB2', 'IL11', 'ZNF354A', 'IL9R', 'COL15A1', 'HIST1H4C', 'FANK1', 'OTOS', 'ETF1', 'ARL15', 'RPL22', 'CYP2B7P', 'CNOT7', 'CELSR2', 'SLC36A4', 'CLEC12A', 'NUTM2F', 'STXBP2', 'TUBA3C', 'OR5AC2', 'C7ORF49', 'PIK3IP1', 'CPLX1', 'HOXA6', 'CDIPT', 'SMCHD1', 'HCG18', 'TPPP3', 'TFIP11', 'SNORD111', 'GHDC', 'SUMF2', 'VAMP3', 'C5ORF38', 'CORT', 'SSFA2', 'GAGE1', 'ACSM4', 'MAPK4', 'CNPPD1', 'AP1B1', 'PMPCB', 'SNX4', 'TUBA1B', 'ABHD14A', 'LRIT2', 'SNORA21', 'GATA1', 'PLCH2', 'JUP', 'PDRG1', 'PDCD1LG2', 'HIST1H2BK', 'DHX34', 'FBXO22', 'RFXANK', 'RHEBL1', 'SKIDA1', 'CDHR5', 'PHYHIP', 'NUMA1', 'C10ORF95', 'NPTX1', 'DUS3L', 'BDP1', 'PCDHGA3', 'ZNF334', 'FOXD1', 'AATK.AS1', 'TCP10L2', 'CRYBA1', 'PLD1', 'PAH', 'OR13C4', 'MS4A7', 'RCCD1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.5973287929418666 Spearman Correlation: 0.5687549353553839 Coefficient of Determination: 0.3333552504105334 RMSE: 0.303074027594748 NRMSE: 0.11196475175931907 MAPE: 3014.883187117586 Pearson Correlation: -0.08407708874212327 Spearman Correlation: 0.03083924268755894 Coefficient of Determination: -1.3986736605417407e+25 RMSE: 1402886764847.1414 NRMSE: 723995853252.3824 MAPE: 32383766097866.57 Predictor: ElasticNet Pearson Correlation: 0.4268226557242471 Spearman Correlation: 0.40964896902849746 Coefficient of Determination: 0.1521662936645788 RMSE: 0.34178801358976874 NRMSE: 0.1262668741349857 MAPE: 574.8527277429175 Pearson Correlation: 0.06078759344276298 Spearman Correlation: 0.11345722368549412 Coefficient of Determination: -0.030570730371565213 RMSE: 0.3808055958879762 NRMSE: 0.19652453728026845 MAPE: 126.08723647430907 Predictor: RandomForests Pearson Correlation: 0.4413758592781592 Spearman Correlation: 0.37064737179656765 Coefficient of Determination: 0.14140517666415642 RMSE: 0.34395024390284334 NRMSE: 0.12706566769103922 MAPE: 915.5283846185035 Pearson Correlation: 0.06014524296491498 Spearman Correlation: 0.18801580333625992 Coefficient of Determination: -0.01979826458654732 RMSE: 0.37881010370481344 NRMSE: 0.1954947121354252 MAPE: 124.5015394080945 Protein: CDH3 x_train_column_count: 75 x_train columns: ['ADIG', 'KIAA2018', 'TCAF1', 'ORAOV1', 'TEX2', 'P2RY8', 'ACKR1', 'EFHC2', 'TNXB', 'ITPR3', 'RNF17', 'VPS52', 'NEUROG2', 'FAM186A', 'DNAJB14', 'C12ORF10', 'WTAP', 'CLRN1.AS1', 'ABCA10', 'AP4M1', 'SMC2', 'PFDN2', 'NFIA', 'KCNE1', 'RNF168', 'HSFY2', 'SIVA1', 'ACBD6', 'TMEM19', 'SNORD77', 'MEIS1', 'RNF214', 'GPR1', 'PCDH10', 'GMCL1P1', 'PALB2', 'INE1', 'TMEM135', 'MYT1', 'YDJC', 'NKX1.2', 'SNORD114.8', 'TPGS2', 'SLC39A8', 'SLC5A4', 'DIMT1', 'ATAT1', 'RTN4RL1', 'SPRR1B', 'NINJ2', 'ARMT1', 'S1PR5', 'KARS', 'NGLY1', 'PERP', 'ECEL1', 'SH2B3', 'GPR6', 'CDC14B', 'SNORD30', 'WNT9A', 'TM6SF2', 'SGCE', 'LTF', 'ZNF69', 'NID2', 'CEBPA', 'MTRF1L', 'KRTAP10.6', 'FZD8', 'NBPF6', 'HNRNPR', 'FANCI', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.42200497453714836 Spearman Correlation: 0.4339311379995469 Coefficient of Determination: 0.17808819853409918 RMSE: 0.1892965198276135 NRMSE: 0.1328061120191485 MAPE: 623.5373531222076 Pearson Correlation: 0.24175539729121784 Spearman Correlation: 0.26516305337668195 Coefficient of Determination: 0.03591063808085315 RMSE: 0.20087245521316935 NRMSE: 0.15374735379994744 MAPE: 302.0519907219741 Predictor: ElasticNet Pearson Correlation: 0.3601290770794183 Spearman Correlation: 0.3680393035093479 Coefficient of Determination: 0.1013357118237691 RMSE: 0.19793781110819855 NRMSE: 0.13886864448854924 MAPE: 279.618333970036 Pearson Correlation: 0.2977447920412892 Spearman Correlation: 0.3193161352408469 Coefficient of Determination: 0.07737450579067784 RMSE: 0.19650539033053507 NRMSE: 0.15040481154414054 MAPE: 263.4565461657972 Predictor: RandomForests Pearson Correlation: 0.3874568780271777 Spearman Correlation: 0.38805441382847194 Coefficient of Determination: 0.12005560841866325 RMSE: 0.1958653600689431 NRMSE: 0.13741466020439966 MAPE: 279.0553622304692 Pearson Correlation: 0.2446724387934824 Spearman Correlation: 0.24469133575459984 Coefficient of Determination: 0.05764847909119253 RMSE: 0.19859495440547617 NRMSE: 0.15200415948249624 MAPE: 279.1598814215721 Protein: PTEN x_train_column_count: 886 x_train columns: ['CYP27C1', 'ZP3', 'HBS1L', 'VLDLR', 'HOXA13', 'CD38', 'GSTA3', 'SPSB1', 'ERMAP', 'TMEM116', 'CTAGE10P', 'FAM161A', 'GPX3', 'SNAP23', 'ZNF177', 'LRRC74A', 'NUP153', 'PIFO', 'METTL21A', 'HIST1H2BM', 'SAP30BP', 'TELO2', 'VASH2', 'ZMAT3', 'LMBR1', 'SRPK2', 'ZNF831', 'ZNF770', 'EEF1B2', 'ZNF320', 'C20ORF141', 'RNU6ATAC', 'ZMYM2', 'SLC7A10', 'WNT5B', 'SNTA1', 'LOC401463', 'GRAMD1B', 'IGLL1', 'PPP1R10', 'KCNMB1', 'BLNK', 'SART3', 'LINC00628', 'IFT122', 'IFNGR1', 'FAM27L', 'EMILIN2', 'CNTNAP5', 'CACNG4', 'PLEKHB2', 'C1ORF53', 'TRNT1', 'SLC22A12', 'VPS33A', 'R3HDM2', 'AIFM1', 'GUCY1A3', 'CPNE8', 'DUX4L6', 'GAS7', 'CNNM2', 'PWWP2A', 'RHOT2', 'SERPINB3', 'C9ORF16', 'AKNA', 'PCSK2', 'COL6A3', 'FOXQ1', 'CDH11', 'LAMB2', 'TMEM91', 'POMK', 'ANKRD13A', 'CYSTM1', 'CCDC25', 'ANAPC10', 'LINC00518', 'GBGT1', 'TCP10L', 'RASA3', 'PLCZ1', 'SPEG', 'POLB', 'RNF115', 'ATAD3C', 'FAM173A', 'C12ORF74', 'BMS1P6', 'ARF3', 'TARM1', 'ACTL8', 'CFL2', 'ZRSR2', 'RBFOX2', 'BRI3', 'HMGB3P1', 'PNPLA1', 'DLGAP2', 'FRAT2', 'CARD11', 'TCF3', 'FAM189B', 'SPON1', 'CACNG5', 'RFX3', 'VCX3B', 'LINC00893', 'ZNF700', 'OR4K14', 'UBE2D4', 'TEKT5', 'HIST1H3F', 'PRKCD', 'ZNF311', 'RNF5', 'OR5H15', 'DDX3X', 'E2F3', 'MTL5', 'BTN3A2', 'CRIPT', 'RPL7A', 'SYT4', 'TLE6', 'GLT1D1', 'SLC30A8', 'SUSD2', 'FUT5', 'IHH', 'TENM4', 'OR1M1', 'C20ORF202', 'TMEM50B', 'LCE1B', 'BTBD6', 'SPX', 'PTRHD1', 'SUGCT', 'TJP3', 'ZNRD1.AS1', 'XKRY', 'HGSNAT', 'ARL17A', 'ANAPC7', 'ALDH16A1', 'DIP2A', 'PROSER2', 'C19ORF54', 'TAAR1', 'BRWD1', 'BCL2L1', 'CTSS', 'ARF5', 'TRIM33', 'ACTR2', 'GULP1', 'SLC22A24', 'PTPRA', 'PTCHD3', 'FBF1', 'KIAA0930', 'TMPRSS4', 'NOMO2', 'HES5', 'CLDN16', 'C19ORF66', 'DSCR9', 'RNF4', 'RNF144B', 'CEP162', 'TACSTD2', 'FAHD1', 'PIWIL2', 'ITPR2', 'SYT1', 'SNORD56B', 'DEC1', 'C21ORF91', 'DHX35', 'SNORA15', 'ZNF512', 'CDON', 'DDX24', 'SUPT20H', 'HACD2', 'AATBC', 'EVA1B', 'SLC25A53', 'PLCXD3', 'NRSN2', 'SWSAP1', 'NHLH2', 'EXOSC7', 'DUSP9', 'ABCA9', 'RASA4CP', 'RNF130', 'ZNF90', 'RPP21', 'OR8U1', 'FAR2', 'DTX1', 'GK', 'TK2', 'LINC01548', 'DHRS7', 'AKAP8L', 'SH2D5', 'TIMM13', 'CCDC24', 'CABIN1', 'SV2B', 'AFP', 'MAP1A', 'TTC37', 'AMT', 'FAM53A', 'TRDN', 'CEP44', 'OR2W3', 'TERT', 'MTMR14', 'RMDN3', 'TNNT3', 'MPC1', 'DPP7', 'OLIG1', 'MRPL46', 'ZNHIT6', 'PPP1R27', 'LOC646471', 'DSC1', 'C2ORF73', 'NEGR1', 'B3GNT2', 'CENPA', 'RCCD1', 'CCKAR', 'CXORF66', 'NFYB', 'HPYR1', 'SUFU', 'RDH13', 'CMAHP', 'KRTAP11.1', 'DSCR8', 'KLK6', 'CXORF40A', 'TMEM14C', 'COX19', 'EP400', 'GNG5', 'C2ORF44', 'SPACA6P', 'OTOR', 'SCN2B', 'LIN9', 'MSX2', 'SPATA33', 'SMCR5', 'PIEZO1', 'SGOL2', 'TIMM10B', 'MBLAC2', 'NKX2.5', 'STATH', 'HTR1D', 'INTU', 'BCAR3', 'GINS1', 'TTC23L', 'TSGA10', 'IL13RA1', 'RANBP3', 'OGDH', 'USH2A', 'NFIB', 'GSTK1', 'POLE2', 'ROPN1L', 'ADAMTS2', 'ADIPOR1', 'MPDZ', 'TMEM17', 'SLC25A48', 'METTL2B', 'RPL19', 'LCE1E', 'USP17L2', 'MYCL', 'SNAR.I', 'CAPNS1', 'SNORA74A', 'PAXIP1.AS2', 'TMEM79', 'CMC2', 'KCTD2', 'MYADM', 'UBE2Z', 'DUSP3', 'RPS6KA6', 'FAM102A', 'DNAJB6', 'UGDH', 'PDILT', 'SNORD113.2', 'SIAE', 'DEFB121', 'CCDC112', 'LINC00982', 'CNOT1', 'OR10Q1', 'OR5B21', 'ZNF592', 'FOXL1', 'PCDHGB8P', 'CHP2', 'EPB41', 'PCF11', 'SNORD115.9', 'PCP4', 'SSR4', 'TNFRSF10A', 'FRG1', 'DNAH3', 'NAT8B', 'FAM183CP', 'CALHM2', 'ARID1A', 'CDH20', 'ICOS', 'TRMT13', 'ATG7', 'AP2M1', 'RFPL1S', 'BOLL', 'HOXC9', 'KCNH6', 'DNAJC22', 'PRAMEF11', 'SC5D', 'TMEM47', 'CHN1', 'DUX4L1', 'DEF8', 'HORMAD1', 'ANKRD30BL', 'SHISA3', 'PSMD3', 'ARL10', 'MAN2B2', 'TFAMP1', 'AP1S3', 'TCP10', 'NR4A2', 'LOC220729', 'HLA.DMB', 'DMTF1', 'ZNF765', 'PGAP2', 'CFH', 'BLOC1S5', 'TAAR2', 'CASD1', 'PQBP1', 'C1QB', 'C3ORF79', 'PLEKHH1', 'TMTC1', 'RLF', 'COLGALT2', 'EAF2', 'FGD4', 'ANKS4B', 'DYDC2', 'PTX4', 'RAB6A', 'ARHGAP33', 'ERH', 'ADAMTS15', 'C1ORF186', 'DTX2P1.UPK3BP1.PMS2P11', 'ADI1', 'ARMC10', 'HBZ', 'SLC16A11', 'LACTB', 'UGP2', 'SNORD116.10', 'DNA2', 'ZG16', 'ZBTB7B', 'BREA2', 'C6ORF10', 'LRRC40', 'IP6K3', 'SSX3', 'HOMER3', 'CRCT1', 'UBE2Q2P1', 'BACH1', 'LILRA4', 'FNDC5', 'IRF8', 'MRPS7', 'RPTOR', 'TNFSF4', 'PCBP2', 'ISCA1', 'FBXO41', 'TBC1D23', 'TEAD1', 'APBB2', 'SNORA11', 'SELO', 'DLG1', 'RNF148', 'JAKMIP2', 'TMEM25', 'ACOT4', 'ZNF532', 'T', 'DSCAM', 'AP2A1', 'SLC43A3', 'DYNLRB1', 'CETN1', 'CYP46A1', 'EN1', 'ZFP64', 'TSPAN3', 'LAMA1', 'ZP4', 'CCDC57', 'SLC7A8', 'TMLHE', 'CCM2', 'PCDHB7', 'PRR32', 'SNAI2', 'TTTY17A', 'AURKAIP1', 'UG0898H09', 'LRRFIP2', 'REG4', 'INTS10', 'PUS7L', 'HOXB6', 'APOL4', 'KCTD18', 'NR1I2', 'SLC26A4.AS1', 'KLRD1', 'CEP41', 'LINC00669', 'WDR63', 'LAX1', 'CCR4', 'SSTR4', 'LINC00152', 'TUBAL3', 'SERPINE1', 'STRN', 'RXFP2', 'SOWAHD', 'ADCK4', 'SLC2A9', 'EXPH5', 'OR4X2', 'CRMP1', 'BOD1L1', 'MARVELD1', 'ZSCAN23', 'ABCG2', 'MKRN3', 'PNMA5', 'HIGD2A', 'ANKRD32', 'SNORD115.45', 'MAGEB18', 'TSPAN2', 'ASB12', 'EIF3C', 'TM6SF1', 'USP48', 'MBP', 'MSR1', 'CACNA2D4', 'SMNDC1', 'DAPK2', 'SOCS2', 'PTPN11', 'ALG3', 'PABPN1', 'PAK1', 'HIST1H3E', 'PRDX3', 'C7ORF49', 'C15ORF57', 'STAU2', 'ACTL9', 'HLA.DQA1', 'TPM2', 'OR10G9', 'SLC30A7', 'SMIM7', 'MEG8', 'TRPS1', 'AGPAT2', 'IGFL1', 'MANEAL', 'HMBOX1', 'CSRNP2', 'NT5C1A', 'UGGT2', 'OCLM', 'AARS', 'SNX15', 'MT1L', 'MAU2', 'GALNT15', 'CRIP3', 'OTC', 'SLC45A4', 'CDK10', 'TARBP2', 'RASA2', 'LOC727896', 'PRPF38A', 'CENPP', 'PIK3C3', 'SLC22A25', 'TGFBRAP1', 'SEL1L2', 'PPRC1', 'NLRP5', 'DPP4', 'KIF1A', 'NUFIP1', 'DACT2', 'NDUFS2', 'DNMT3L', 'ZZZ3', 'C7ORF66', 'LINC00523', 'PPP1R11', 'TSPO', 'FKBP6', 'EEF1A1', 'RHOBTB3', 'FAM214A', 'ARHGEF2', 'STRBP', 'SPATA31D5P', 'SNORD62A', 'CMTR2', 'WSB1', 'KRTAP9.8', 'KCTD20', 'SUN1', 'TMEM59', 'THEM4', 'KCNA7', 'ZNF576', 'IRX2', 'ERCC6', 'ZP2', 'UBA6', 'A1CF', 'TRAT1', 'TP53', 'C9ORF85', 'ZNF518B', 'SLC43A2', 'BTBD8', 'MROH5', 'TSSC4', 'RNASE11', 'PYGM', 'WFDC10A', 'C7ORF61', 'ZNF92', 'PRDX6', 'F2', 'TACO1', 'OR7E156P', 'TMEM183A', 'QSOX2', 'MUC2', 'SMAD6', 'CRIP2', 'UCHL5', 'VWCE', 'RPS9', 'C9ORF153', 'ATP13A3', 'CPSF3L', 'ACTRT2', 'DCLK1', 'ADAM18', 'GALNT13', 'ZNF853', 'C15ORF61', 'PADI2', 'FGB', 'HOXB13', 'KRTAP19.6', 'TDRD5', 'TMEM18', 'IGF2', 'PDCL', 'CAV3', 'CHM', 'UNK', 'OR10X1', 'SFSWAP', 'GPR183', 'TRAM2', 'SNORD88A', 'COTL1', 'BTN2A2', 'TSHB', 'PCAT4', 'SPEF1', 'DNHD1', 'PRPF31', 'PFAS', 'MEX3D', 'XRCC6BP1', 'MAX', 'POM121', 'MAGEA6', 'NUMB', 'PTK6', 'IARS2', 'FBRSL1', 'POR', 'C6ORF48', 'ZNF687', 'MAGEB10', 'SMIM11', 'RNF113B', 'PDPK1', 'ANKDD1A', 'OOEP', 'SPACA3', 'CSN1S1', 'ATP1B1', 'GATA3', 'IDO1', 'TRAP1', 'EPHA6', 'CCBL1', 'GLS', 'PRSS55', 'EFHD2', 'GBP7', 'IFI27', 'MED11', 'FUT10', 'LRFN2', 'NDUFA10', 'OSGEP', 'QTRT1', 'MMP8', 'BACE2', 'CMTM8', 'FUNDC2', 'TRAPPC6B', 'RGN', 'NCAPD3', 'IFRD1', 'NUFIP2', 'LYN', 'BRD8', 'SHFM1', 'ARX', 'DCAF16', 'FCER1G', 'GYPB', 'OR2G3', 'LARS2', 'NUTM2F', 'DFFA', 'ITPKC', 'OR51S1', 'LUC7L3', 'MAP3K15', 'PIM1', 'TLN1', 'C1ORF123', 'DENND5B', 'XYLT2', 'SFRP5', 'CYP4Z1', 'MCTP1', 'HELT', 'GTF2E2', 'ZNF385B', 'LMF1', 'KLHL32', 'OPALIN', 'KRTCAP2', 'CELF4', 'DPM2', 'NEUROD6', 'CAMK2A', 'MUT', 'CACNB4', 'RAB3B', 'HPGDS', 'PDXDC2P', 'RPL35', 'SLC25A5', 'PCSK7', 'SNORD19B', 'GRB10', 'LPA', 'MPZL1', 'SPAG6', 'ARGFX', 'OR2Y1', 'CEMIP', 'EZH1', 'CD9', 'GAGE2B', 'NFATC2IP', 'C2ORF69', 'OR5AU1', 'PPIAL4E', 'TCAF2', 'PCYT2', 'WNK1', 'GOLGA8CP', 'SDHAF2', 'F8', 'MAGEA3', 'RABEP1', 'CT47A9', 'MSI1', 'NEURL1B', 'TRIM47', 'PRPF4B', 'DOCK3', 'ISM2', 'ZNF704', 'ZNF746', 'FKBP1A', 'RPL19P12', 'GPR107', 'OLFML2B', 'UTP18', 'ITPK1.AS1', 'SDHAP1', 'PTPN5', 'SLC7A3', 'CYP4B1', 'CECR5', 'CYP7B1', 'RRN3P1', 'IFT88', 'MIA3', 'KCNQ1OT1', 'CD3D', 'TMED10P1', 'MFSD7', 'PTGDR', 'LRIF1', 'TBC1D13', 'ICAM3', 'PIH1D2', 'ALG14', 'SNORD59B', 'LIMS3', 'IKZF2', 'TMC6', 'FABP6', 'LIG3', 'CSF3R', 'TCEB3C', 'TANK', 'LHX9', 'ANKRD50', 'TIMM17A', 'NKX6.3', 'SPRYD4', 'TXNDC15', 'LINC00471', 'MYO9A', 'CLDN20', 'LRRC71', 'SUDS3', 'SDHAF3', 'WTIP', 'TIAM1', 'B3GNT3', 'PGBD4', 'PTER', 'ARFGEF1', 'GBP6', 'CD248', 'CAB39', 'RER1', 'DEPDC7', 'GJA10', 'APOBR', 'SUZ12P1', 'GRPEL2', 'SEPT8', 'RFX7', 'TTC9C', 'WASH3P', 'SNORD46', 'CSTF1', 'OR4E2', 'DNAJB7', 'CLDN2', 'KLHDC8A', 'PPP1R9B', 'MCHR2', 'PPIL4', 'ZMAT2', 'UTP20', 'CYP21A2', 'SH3BGRL', 'OR52H1', 'GRAMD2', 'SRRM2', 'ZNF542P', 'SH3YL1', 'CTU1', 'ERBB2', 'CCNL2', 'ST3GAL3', 'MRPS35', 'RAB35', 'DMC1', 'SBDS', 'HERC3', 'RFC3', 'LRMP', 'OXTR', 'CTLA4', 'ULK2', 'PTCD1', 'KDM2B', 'COL8A1', 'CASK', 'TEX28', 'MAGED1', 'SPATA2', 'EVA1C', 'DHX38', 'GGT5', 'TMEM233', 'POTEE', 'KRTAP19.8', 'TMSB10', 'SOD3', 'NES', 'DAGLB', 'RPLP0P2', 'TTTY2', 'KLF14', 'CRLS1', 'SNX24', 'ODC1', 'C22ORF31', 'RPL9', 'WNK4', 'RNMTL1', 'FGFR2', 'TDGF1P3', 'ZNF432', 'FRY', 'LOC100129550', 'HNRNPL', 'C6ORF106', 'REL', 'OR1I1', 'ZPLD1', 'IQSEC3', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 0.8550054032644235 Spearman Correlation: 0.805721031054441 Coefficient of Determination: 0.7266337036164561 RMSE: 0.32754850501404936 NRMSE: 0.05121546478212014 MAPE: 484.40339897425633 Pearson Correlation: -0.08844376367891273 Spearman Correlation: 0.03110545835459339 Coefficient of Determination: -4.936483936781605e+23 RMSE: 348958347845.7838 NRMSE: 115008354045.80574 MAPE: 28986054389927.754 Predictor: ElasticNet Pearson Correlation: 0.5835750327262522 Spearman Correlation: 0.5446340755775441 Coefficient of Determination: 0.29515845796608786 RMSE: 0.5259553576972854 NRMSE: 0.08223834847897513 MAPE: 733.2039159009123 Pearson Correlation: 0.16502120724590028 Spearman Correlation: 0.19087406106721294 Coefficient of Determination: -0.07200819281229087 RMSE: 0.5142375431819535 NRMSE: 0.16948043740753854 MAPE: 232.171234139656 Predictor: RandomForests Pearson Correlation: 0.5453275125299292 Spearman Correlation: 0.47441657974965773 Coefficient of Determination: 0.16116887730185414 RMSE: 0.5737733924438632 NRMSE: 0.08971517355075649 MAPE: 486.73952414796196 Pearson Correlation: 0.19212223220557337 Spearman Correlation: 0.21826185571147283 Coefficient of Determination: 0.031858959341578674 RMSE: 0.488690665199204 NRMSE: 0.16106079533293916 MAPE: 183.5304077111956 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['FAM71E1', 'TRAF3', 'MUC5B', 'SNORA28', 'LYRM7', 'TBATA', 'MRGPRE', 'AADACL2', 'EIF1AX', 'TTC19', 'TINAGL1', 'NFXL1', 'PABPC1L2B', 'SNORA34', 'CCDC60', 'INTS7', 'TAF1L', 'OR1A2', 'FANCA', 'DUSP2', 'SEMA3B', 'C4ORF29', 'AGO1', 'C14ORF37', 'HIST2H3D', 'CDC42EP4', 'MTHFD1L', 'ZSCAN12P1', 'CDKN3', 'CFAP126', 'CD200', 'TTC39A', 'GOLGA3', 'C2ORF40', 'DSG3', 'MAPK11', 'SUOX', 'TOB2P1', 'RPS14', 'TMEM223', 'PIK3AP1', 'NF1', 'DHX15', 'STYK1', 'DNAL4', 'FAM167A', 'TMEM125', 'PCBP4', 'INTS4P1', 'CORO1C', 'IGSF11', 'CDC73', 'WRNIP1', 'CD244', 'LOC399815', 'KIAA0408', 'KLHDC8B', 'MGAT5', 'KRT12', 'SLC4A3', 'P2RX6', 'SNAR.E', 'ETAA1', 'DNAJA4', 'USP22', 'GDF7', 'PPP1R3F', 'ICA1L', 'BMI1', 'SERPINA3', 'LINC01001', 'RTN4RL1', 'DYSF', 'COG2', 'SMPDL3A', 'CCL7', 'TTC38', 'COL5A1', 'SNX13', 'ACYP2', 'FAF2', 'DNAAF3', 'SSX9', 'IGFL4', 'BCAS3', 'TCF15', 'RASA4', 'FAM41C', 'SNORD114.18', 'ZAR1L', 'IL4', 'NDRG2', 'CHGA', 'ADCY7', 'DEFB110', 'SNORD115.48', 'RBBP5', 'PTGER3', 'LOC100133331', 'ZNF48', 'ALG3', 'RPS26P11', 'C14ORF1', 'LINC00488', 'LINC00176', 'SAV1', 'ENKD1', 'OXSM', 'ITFG1', 'GAB3', 'MITF', 'MC1R', 'XPNPEP2', 'PWP2', 'ZNF257', 'WTIP', 'MSANTD3', 'PRAMEF22', 'GALR1', 'METTL23', 'EIF1AD', 'TKTL2', 'RBMY1B', 'EPHA8', 'RAD54B', 'TLR3', 'MFSD8', 'ARHGAP21', 'CES4A', 'NCR2', 'MAPK8IP1', 'CPLX2', 'PPP4R2', 'FURIN', 'SMIM7', 'SNORD45A', 'FLNB', 'TPBG', 'SLC6A17', 'RMI1', 'PRAMEF8', 'SLC35G2', 'CCDC85A', 'AASDHPPT', 'OR51B5', 'SH2B2', 'DUSP14', 'GPR19', 'OCM2', 'BTF3P11', 'CD300A', 'F2', 'SUGT1', 'GDAP2', 'CCDC181', 'LRRC1', 'SCN4A', 'MTCP1', 'TMEM218', 'POMGNT2', 'PRDM11', 'EGR1', 'ZNF83', 'KRT8P41', 'EGF', 'CUL2', 'ADGRF4', 'AMICA1', 'SLC30A2', 'ITIH2', 'BAG5', 'STAM2', 'SI', 'TARSL2', 'P2RY4', 'SEPT7P2', 'CT47B1', 'FAM43A', 'NDUFA13', 'CYBRD1', 'TPM1', 'DBI', 'SNORA38', 'TCAP', 'GPAM', 'ADAMDEC1', 'ST3GAL1', 'HIBCH', 'TPI1', 'SNORD59A', 'KRT222', 'TREML4', 'UBQLNL', 'DYNC1LI1', 'CARD16', 'MAF', 'RBBP4', 'CLN8', 'ZNF263', 'UTP6', 'ZNF285', 'SLFN13', 'SNORD9', 'LINC00998', 'C9ORF156', 'ABCA12', 'GEMIN5', 'CLDN1', 'LTA4H', 'CX3CR1', 'HCFC1R1', 'HMCES', 'FGD5', 'ALS2CR11', 'BCCIP', 'SCARA3', 'SMNDC1', 'CPEB3', 'PCOLCE', 'MAGEE1', 'TMEM207', 'PEX10', 'ATP6V1C1', 'UBAC1', 'CUEDC2', 'SMOC1', 'GAGE1', 'LOC100133920', 'GUSBP2', 'SLC35A5', 'PCDHGC4', 'LRIT1', 'CMTM4', 'SCGB1A1', 'IL22', 'BACH1', 'FOXO3', 'METTL11B', 'PDP2', 'CRYZL1', 'FAM212A', 'ROM1', 'NPHP1', 'G2E3', 'UNC93B1', 'ZNF687', 'DOK5', 'TTI2', 'SLC39A13', 'TSPAN6', 'CD68', 'PAK1', 'YBX2', 'NUPL1', 'RFPL3', 'TBPL2', 'DISC2', 'NINL', 'MRPL23', 'FOXL2NB', 'ZBTB10', 'LOC148696', 'ZNF236', 'STEAP1B', 'USP14', 'TIMM44', 'ITM2B', 'GAL', 'TINAG', 'OR1K1', 'PITHD1', 'SKINTL', 'WNT9A', 'CIAPIN1', 'SH3RF1', 'RANBP10', 'TPP2', 'MTFMT', 'METTL1', 'EYA1', 'ACSL1', 'ADM', 'NRIP1', 'COA3', 'LHX5', 'ELN', 'ZNF90', 'CRNN', 'STX10', 'PADI1', 'CYFIP2', 'PCIF1', 'NXF2', 'RPL12', 'CNTN4', 'PIGM', 'SPINK14', 'PLOD1', 'CNTRL', 'MARCH6', 'MCM2', 'SCOC', 'CDCA5', 'BCORP1', 'CP', 'LINC00917', 'YAF2', 'C8ORF82', 'CRELD1', 'PCDH15', 'TMX3', 'WNT8A', 'CCNH', 'MFSD4', 'FAM65A', 'RBM4', 'MPV17L', 'HIAT1', 'HPSE', 'C9ORF47', 'MGC16275', 'TEAD4', 'C9ORF171', 'DCBLD1', 'OSCAR', 'GPM6B', 'IL1RL1', 'NLRP6', 'HSCB', 'SLC2A14', 'SLC12A8', 'PDE9A', 'SLC4A2', 'NTN4', 'FIZ1', 'OR13C2', 'KLHL42', 'ZNF600', 'WDR37', 'FAM58BP', 'RSU1P2', 'SIRT6', 'NDUFB1', 'DDX20', 'ATG9B', 'MARCH9', 'NOL4L', 'TOPAZ1', 'SFPQ', 'KANK2', 'MED22', 'TMEM88', 'WNT2', 'PCDHA11', 'TMED5', 'CKS1B', 'GAB2', 'ZNF324', 'UGT3A1', 'BSPRY', 'ATG16L2', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.4946033730064043 Spearman Correlation: 0.45098332510615324 Coefficient of Determination: 0.2010312165011212 RMSE: 0.17663490135007132 NRMSE: 0.11426319417675036 MAPE: 274.2735298672722 Pearson Correlation: -0.03283523002000133 Spearman Correlation: 0.10552886771625812 Coefficient of Determination: -4.548168885503126e+24 RMSE: 393973211937.11273 NRMSE: 394288642851.3939 MAPE: 50044742534512.43 Predictor: ElasticNet Pearson Correlation: 0.24199965493350942 Spearman Correlation: 0.2419198023720649 Coefficient of Determination: 0.035059860967655676 RMSE: 0.19411620875456617 NRMSE: 0.12557166156997798 MAPE: 115.28043805508048 Pearson Correlation: 0.07821900350683182 Spearman Correlation: 0.06481447634063436 Coefficient of Determination: 0.0009395882828613367 RMSE: 0.1846478591963852 NRMSE: 0.18479569575298763 MAPE: 104.2722950810371 Predictor: RandomForests Pearson Correlation: 0.41374049022699066 Spearman Correlation: 0.36067140707970063 Coefficient of Determination: 0.08857935869319855 RMSE: 0.18865618350029562 NRMSE: 0.12203963069119818 MAPE: 116.9365535643861 Pearson Correlation: 0.015537394609885218 Spearman Correlation: 0.1374623664306534 Coefficient of Determination: -0.02062363989553151 RMSE: 0.18662989571830635 NRMSE: 0.1867793191736453 MAPE: 114.78691939385254 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['GPR87', 'C20ORF195', 'TRPS1', 'ALDH5A1', 'PDCL', 'COPS4', 'LUZP1', 'SIAH3', 'SIL1', 'ALAD', 'BCL9', 'ABCA8', 'C4ORF33', 'ALX1', 'C11ORF80', 'GTF2H3', 'PVR', 'SIN3A', 'C16ORF82', 'KCNQ3', 'EHD1', 'GRM6', 'GTF3A', 'VBP1', 'SRCIN1', 'RFNG', 'GPANK1', 'CALCRL', 'CACNG3', 'PLA2G5', 'OR2W1', 'SYT6', 'GRM3', 'SLC9A1', 'MKI67', 'ARSJ', 'SLC25A5.AS1', 'FGD2', 'GOLGA6L5P', 'ZNF99', 'DMRT2', 'GNAS.AS1', 'PQLC2', 'USP2', 'NPHS1', 'OR51B6', 'GJA1', 'MYH2', 'SOX13', 'HDAC10', 'ATP6V1G2', 'MYO18B', 'ZBTB42', 'MS4A2', 'SH3D19', 'EIF4E1B', 'ETV3', 'LRRFIP1', 'DIP2B', 'NCSTN', 'MTMR8', 'DMRT3', 'RPL18A', 'KLHL2', 'TUBD1', 'FTHL17', 'ACVR2B.AS1', 'PTGES2', 'CAPN12', 'USP18', 'SLC27A4', 'TAS2R30', 'S100A16', 'ZNF740', 'SLC2A7', 'TLE6', 'RPLP0P2', 'RIPK4', 'OR2D2', 'IL6', 'COL1A1', 'JAM2', 'LOC100270804', 'SHC1', 'MYOT', 'TRUB1', 'ORMDL2', 'CLLU1', 'ICAM3', 'MYCNOS', 'ZMYM6', 'VN1R1', 'TDO2', 'PTCH2', 'WWC1', 'PARP14', 'CCDC129', 'MS4A6A', 'EYA3', 'DNAH8', 'NF1P2', 'NSUN6', 'DUOX1', 'HCG9', 'KBTBD6', 'GRIP2', 'LRIG3', 'BPNT1', 'KCNN4', 'COL7A1', 'WIBG', 'TRMT112', 'TMEM181', 'METTL21C', 'OR2C1', 'SEC63', 'KIAA1671', 'CDRT15', 'LSM14A', 'PDE1C', 'APOC3', 'NIPSNAP1', 'FANCL', 'ZNF578', 'TAF9B', 'PAFAH1B3', 'ZFYVE21', 'BRD7P3', 'TCAF1', 'RRM2', 'TRIM29', 'FAM72A', 'LMNB1', 'CTAGE10P', 'ZZZ3', 'TFCP2', 'SOS1', 'BCAS1', 'SCARB2', 'LINC00593', 'ALG1L2', 'SLC47A2', 'BCRP3', 'SQRDL', 'EXOC1', 'TRPC4AP', 'MANF', 'CYLC1', 'NDRG2', 'MRPL11', 'FAM167A', 'STK24', 'ATL2', 'EIF4EBP1', 'AGR3', 'CIB1', 'LINC00623', 'C16ORF90', 'MACROD1', 'AKR7L', 'CYP3A5', 'CCDC186', 'SNORD4A', 'PPOX', 'ZC3H12B', 'PIP5K1P1', 'XPR1', 'NPR3', 'PLGLA', 'FBXW8', 'TAS2R5', 'STX1B', 'TOP1P1', 'ARHGAP25', 'SMG8', 'ACOT1', 'COMMD4', 'TAP1', 'SMC2', 'PLP2', 'CYB561A3', 'SPDYE4', 'SMAGP', 'PPBP', 'CLDN23', 'PSAPL1', 'POTEC', 'OR6A2', 'ALG11', 'RAB3IP', 'CD163L1', 'TAS2R43', 'MSH5', 'ARL16', 'TTTY18', 'FSCB', 'UCP1', 'LEP', 'FMNL3', 'PRDM15', 'SLC27A6', 'TMEM170B', 'FARP2', 'PPP3CA', 'CAMK2N1', 'LINC01341', 'FCRL3', 'FRRS1', 'ZBTB16', 'BCLAF1', 'SNORD116.1', 'ZSWIM7', 'DNAJC22', 'TIGIT', 'C4ORF19', 'ZNF84', 'LRRC20', 'SEC23B', 'ELK3', 'C17ORF98', 'BACE2', 'USP32', 'TRAPPC2', 'HMP19', 'DNAJC21', 'CEP41', 'OR8J1', 'PNO1', 'ZSWIM8', 'C15ORF56', 'MAGEA3', 'LIG4', 'EXOC4', 'CMAS', 'ZNF569', 'ATP6V0E2.AS1', 'OR5AK2', 'CDC42EP5', 'LCE3E', 'NAT6', 'ALG12', 'TAS2R60', 'UBALD1', 'TTTY9B', 'C21ORF2', 'ZFP64', 'RDH16', 'WNT8A', 'ZNF433', 'ZIM3', 'LOC440461', 'LIN28B', 'AGK', 'SLK', 'OR2T10', 'ZMAT3', 'ZNF416', 'EDA', 'PRSS41', 'OCRL', 'VCP', 'CCDC137', 'SAMD1', 'UGT2B7', 'WDR24', 'LINC00483', 'NADSYN1', 'HOXD8', 'SSB', 'HPDL', 'PRR20B', 'RPL13AP17', 'RFTN2', 'CIAPIN1', 'LINC00471', 'LINC01102', 'MAGEC1', 'ZNF560', 'NCBP2.AS2', 'GLE1', 'TMEM30C', 'MCM6', 'SLC9A8', 'GATB', 'PCOLCE2', 'SSX4', 'LOC400043', 'TFG', 'GNB1', 'EPB41L2', 'HIST2H3C', 'RHOA', 'TXLNGY', 'SSH2', 'SNORD17', 'SYCP2L', 'RNF150', 'MS4A14', 'CAND1', 'TRIM14', 'C2CD4B', 'DUSP6', 'UBE3B', 'ABCC10', 'ARMC5', 'ADAM6', 'STAU2', 'PPP2R1A', 'OR2A14', 'MMEL1', 'CBX3', 'YAF2', 'PTAR1', 'SORBS1', 'DHFR', 'LEF1', 'TIMM21', 'XG', 'GRK5', 'GZF1', 'HAUS6', 'FUNDC1', 'FERD3L', 'MIEN1', 'WDFY4', 'SFT2D1', 'SNORD45B', 'PPP4R1', 'YWHAH', 'CEP72', 'DOPEY1', 'VWF', 'ACTL7A', 'BTG4', 'TYW1', 'OR10R2', 'TACC2', 'FCMR', 'ELP5', 'LINC00319', 'PCDHB7', 'C2ORF48', 'PLCB2', 'ASTL', 'DCTN1', 'GPR176', 'SNORD36A', 'PPBPP2', 'OGG1', 'CD163', 'ACMSD', 'TAMM41', 'MKNK2', 'KLK9', 'SERPINB7', 'SRSF2', 'TMEM187', 'OR5AN1', 'ZNRD1.AS1', 'TRANK1', 'ZNF689', 'IRGQ', 'SMIM14', 'PRICKLE3', 'XAF1', 'KIAA0408', 'LOC256880', 'ZNF788', 'SRP54', 'GTF2IRD1P1', 'RPL23AP53', 'DDT', 'VGLL4', 'TRIM37', 'ITGA11', 'TANGO2', 'RARA', 'HAS1', 'STK38L', 'HSPE1', 'SGPP1', 'LRRC4C', 'ATMIN', 'DOCK1', 'C14ORF28', 'PSMD11', 'CHST10', 'ACER2', 'DICER1.AS1', 'HRH1', 'ITGAL', 'PMP2', 'CD63', 'IL10', 'ZDHHC4', 'FXN', 'MBOAT2', 'AGTPBP1', 'EPO', 'CALML5', 'CETN4P', 'MBNL3', 'FBRS', 'SCGB1D1', 'DNM1P46', 'CASC5', 'CCDC153', 'RNF168', 'ACVR1', 'CYFIP2', 'ARHGEF15', 'PIK3C3', 'TMEM5', 'GGH', 'NCKAP1', 'OST4', 'BTN3A2', 'VCX', 'AATK', 'NDP', 'TPCN2', 'PEBP4', 'PGM5', 'CABLES1', 'BPIFB3', 'CLDN19', 'KLLN', 'EMILIN3', 'ZNF347', 'SRRT', 'NELFB', 'ADGRE4P', 'SMAP2', 'ILKAP', 'JDP2', 'PDE7B', 'RBM25', 'CPT1C', 'CHURC1', 'BRK1', 'SYNDIG1', 'CFL1P1', 'TSC22D3', 'SUV420H1', 'BCAR4', 'IGIP', 'ZAK', 'CASC2', 'IZUMO2', 'SPAM1', 'FBXO24', 'C11ORF49', 'MYCN', 'C5AR2', 'VPS26A', 'SEPT9', 'COG4', 'BRF2', 'ANKRD33', 'ARHGEF10L', 'OR10A4', 'MOV10L1', 'C9ORF57', 'HFE', 'NPAS1', 'PKD1', 'OSTC', 'KLHL36', 'CXCL8', 'CITED1', 'STRA8', 'EPHX2', 'SPTAN1', 'PHF21B', 'KRTAP10.4', 'ETFA', 'OR5B12', 'KLHDC9', 'LEUTX', 'UHRF1BP1', 'ZSCAN5B', 'COL4A6', 'IFITM1', 'CCR6', 'YWHAB', 'MTIF3', 'SNORD115.9', 'MTIF2', 'SDE2', 'BDH1', 'CDC20B', 'SS18', 'JRKL', 'INSL4', 'DCHS1', 'TXNIP', 'NRBP1', 'RGSL1', 'ANXA8', 'DYNLRB1', 'UBL3', 'TMBIM6', 'TREML5P', 'KIAA1467', 'HNRNPUL1', 'PAGR1', 'NPY', 'DBH', 'SNORD113.1', 'CYS1', 'EFNB2', 'PARD6A', 'PGAM5', 'RASAL2', 'VPRBP', 'CNGB1', 'MRPS35', 'MYO10', 'CCL28', 'HEXIM2', 'GPRASP1', 'HMGCL', 'IQCF6', 'HSPA13', 'ADGRE1', 'FETUB', 'EIF3B', 'IFRD2', 'PTMS', 'RHBG', 'KLF3.AS1', 'PIGO', 'RNF157', 'TNFRSF1A', 'KCNN3', 'GPHN', 'TRDN', 'DPY19L2P1', 'CAPZA2', 'ARID3A', 'CNN3', 'ROGDI', 'SULT2A1', 'CTSH', 'C17ORF89', 'STIM1', 'ADAT1', 'PSMA7', 'FBXW7', 'PPEF1', 'CCT3', 'OARD1', 'LSMEM2', 'RPS13', 'OR9A4', 'UCP2', 'CCDC51', 'CHDH', 'ABHD11', 'C9ORF163', 'SNORD113.7', 'TMEM59', 'EMILIN1', 'GPSM1', 'SUPT20HL2', 'VPREB1', 'ANKRD9', 'SPCS2P4', 'MED13L', 'NDN', 'C5ORF24', 'USP22', 'ACVR2B', 'PTPN1', 'CAND2', 'GDI1', 'ZFP92', 'GRM5', 'KCNC3', 'ADAMTS7', 'METRNL', 'ERGIC1', 'INTU', 'OSBPL2', 'NFU1', 'PDCD2L', 'IFNG', 'LINC01465', 'HADH', 'HIVEP3', 'SNX16', 'PI4KB', 'COX5B', 'KREMEN1', 'APOM', 'UBTFL1', 'PCBP2', 'ADHFE1', 'EPB41L1', 'UBC', 'C1QL4', 'RHNO1', 'DHCR24', 'COL11A2', 'FADS2', 'MYO3A', 'FOPNL', 'VCY', 'LRFN4', 'UCHL5', 'DOK6', 'PHIP', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 0.7506139992938413 Spearman Correlation: 0.6934261070190201 Coefficient of Determination: 0.5236408875333176 RMSE: 0.44359383004622555 NRMSE: 0.1002811868534476 MAPE: 217.75624545216488 Pearson Correlation: 0.060416751581507826 Spearman Correlation: 0.27164982015643235 Coefficient of Determination: -1.5890351882880745e+23 RMSE: 297720547388.98364 NRMSE: 80399823761.54028 MAPE: 3259217652083.313 Predictor: ElasticNet Pearson Correlation: 0.5749370585066257 Spearman Correlation: 0.5050979340081656 Coefficient of Determination: 0.29875408643105905 RMSE: 0.538212066109333 NRMSE: 0.12167108988568621 MAPE: 195.27032521372843 Pearson Correlation: 0.44546619919878333 Spearman Correlation: 0.34216174031801777 Coefficient of Determination: 0.18280267773266057 RMSE: 0.6751581569990323 NRMSE: 0.1823273445852099 MAPE: 930.9918591553924 Predictor: RandomForests Pearson Correlation: 0.4932510319200493 Spearman Correlation: 0.38470602740426113 Coefficient of Determination: 0.18086098934522765 RMSE: 0.5816973198723014 NRMSE: 0.13150159825303523 MAPE: 162.10742459888073 Pearson Correlation: 0.42038248174851317 Spearman Correlation: 0.31541672306592033 Coefficient of Determination: 0.13417897660133227 RMSE: 0.6949540896760651 NRMSE: 0.18767326213234273 MAPE: 887.8114194857371 Protein: TP53 x_train_column_count: 1002 x_train columns: ['SBDSP1', 'TXNDC15', 'NOP56', 'CCDC69', 'ZNF433', 'IDE', 'FAM204A', 'FGF7', 'TBC1D2B', 'RPP21', 'ANGPTL1', 'SS18L1', 'TMEM161B', 'WBP2NL', 'APOL6', 'WNT6', 'CBX1', 'OR2T35', 'ITGA6', 'PALD1', 'DCUN1D5', 'RNASEH2A', 'METTL24', 'KATNAL2', 'HNRNPC', 'TSC22D4', 'ERAS', 'CEP97', 'GIMAP2', 'TMIGD2', 'ATP6V1C2', 'QPCT', 'LOC283332', 'NID2', 'TCF12', 'FAM126A', 'FUS', 'SLC22A20', 'LRRC75A', 'TM6SF1', 'DNAJB1', 'HOXA11', 'MS4A14', 'NUTF2', 'ZG16B', 'EXOSC7', 'MAD2L1BP', 'PINK1', 'DNAH3', 'PRAMEF4', 'UBE2F', 'C16ORF54', 'ZNF525', 'ZNF101', 'TGFB1I1', 'ARRB2', 'ITGB1', 'TAF15', 'TNRC18', 'CCDC183', 'PTPRN2', 'MBLAC2', 'TEKT1', 'ASXL3', 'GALR1', 'TOMM7', 'NSA2', 'WTAP', 'ZFX', 'CEP44', 'C1ORF111', 'FAM169B', 'GPR52', 'BPIFA2', 'ANKRD66', 'MPP4', 'GSDMB', 'CHCHD10', 'KC6', 'CCBL1', 'KCTD16', 'PSMB2', 'CDKN2AIP', 'KAT6A', 'MARCH6', 'EXOSC1', 'UGT1A6', 'LINC01588', 'HAGH', 'SYS1.DBNDD2', 'FABP5', 'PDE7B', 'OTUD7B', 'GJA3', 'KRTAP19.7', 'CDC16', 'MAP3K5', 'DIRAS1', 'ESYT3', 'LUZP2', 'CELF6', 'GNMT', 'SPIN3', 'ZDHHC5', 'LOC400736', 'ACTA1', 'MESDC2', 'UBN1', 'TMEM86B', 'MT1E', 'BATF2', 'SPAG4', 'GCNT7', 'ARHGEF15', 'GIT1', 'IQCC', 'NOX4', 'CDC42SE2', 'C9ORF173', 'CHRFAM7A', 'IKBKG', 'LOC493754', 'CPOX', 'BEST2', 'RNF185', 'GC', 'NRM', 'MYL6B', 'ARSJ', 'TCEB2', 'IL27RA', 'HSPA6', 'SCARNA23', 'GUCY1A2', 'RAX2', 'YPEL4', 'FAM47C', 'TMEM69', 'GOLGA8F', 'IRGM', 'KIAA0754', 'PP7080', 'AKIRIN2', 'UGT2B11', 'MRGPRD', 'EPHA1', 'PLEC', 'S100A9', 'OR4X1', 'UQCRHL', 'CABYR', 'ARL15', 'MTMR2', 'SLC8A1', 'ADAM9', 'NME4', 'ZFAND5', 'NUCB1', 'OR4C16', 'NR2F6', 'SNORD116.8', 'GGT1', 'OSR1', 'ZNF16', 'HHIP', 'DEDD2', 'ABCD2', 'HEXIM1', 'PPM1A', 'SLC12A2', 'ZNF805', 'SLC16A4', 'PIGP', 'LRRN4', 'ADH4', 'EFHC1', 'ZSWIM3', 'AURKB', 'ZKSCAN1', 'CSN1S2AP', 'RASL12', 'NFE2L3P2', 'TFAP4', 'RBMY1E', 'FABP9', 'C17ORF50', 'SOX8', 'QSOX1', 'STK17A', 'MYCL', 'ZNF608', 'APH1A', 'STEAP1B', 'YIPF4', 'TMEM189', 'SMG6', 'KLC4', 'KCNS3', 'MMS19', 'WASF2', 'THAP1', 'KRT37', 'C3ORF35', 'ZADH2', 'PPIF', 'RASGRP3', 'MAGEA5', 'CTSZ', 'GIP', 'CIRBP', 'HES4', 'FIG4', 'PCDH9', 'ZNF154', 'DHX57', 'AP3S2', 'GJD4', 'TMED8', 'MAGEA4', 'RASGEF1C', 'TKTL2', 'GLIDR', 'TOP1MT', 'MEP1A', 'WIPF1', 'STRN3', 'SNORA36C', 'HLF', 'TTYH1', 'SLC35E3', 'SHE', 'PPAPDC3', 'KIF1BP', 'VPS54', 'ZNF879', 'FAM183CP', 'SNORD32B', 'NFE2L3', 'FOXP1', 'NIPAL4', 'TAS2R46', 'TOP2B', 'SYNPO', 'GIPR', 'SCG5', 'LRRC37B', 'SLC10A1', 'ARL14EP', 'SMIM19', 'MTAP', 'ZNF561', 'PRSS42', 'TIMM21', 'SZT2', 'NAP1L6', 'LRRTM2', 'LINC00469', 'RNF19A', 'TACC3', 'SV2C', 'CAV1', 'DYX1C1', 'OR6S1', 'FAM124A', 'NARF', 'CADPS', 'IFNG', 'SYPL2', 'RAB8B', 'CATSPER3', 'FAM173A', 'LOC284661', 'EIF2B5', 'ARIH2', 'PRAMEF14', 'CTSW', 'OR52B6', 'LBH', 'SNORD29', 'OCIAD1', 'AUP1', 'BEX5', 'EFNB2', 'PI4KB', 'CYP2A6', 'MAFG.AS1', 'LOC152225', 'HERC2P2', 'ALG9', 'CCDC142', 'OR1N2', 'TMEM38A', 'DTX3L', 'VCP', 'C1ORF189', 'SLC6A20', 'MYLK4', 'TBL1X', 'SPTBN5', 'NOP10', 'ZSCAN22', 'EGR3', 'LMO3', 'FOS', 'IL21', 'WDR87', 'NPTX2', 'DCLRE1B', 'N4BP2L2', 'HSDL1', 'KCTD9', 'GSTA2', 'NOSIP', 'ZPLD1', 'MLF1', 'FAM182A', 'FRA10AC1', 'CEP112', 'GAS2L1', 'CCDC42', 'OR2B6', 'PIGN', 'SRXN1', 'NDUFB11', 'PDE3A', 'C1ORF116', 'MED18', 'SLC1A2', 'NKX6.1', 'PAGE2', 'RYK', 'AADAC', 'ALDH18A1', 'OAZ3', 'POF1B', 'TREML2', 'PTCHD2', 'ZNF580', 'BUB1', 'DYRK4', 'NT5M', 'INTS3', 'GRAP', 'CEBPD', 'IP6K2', 'GDF3', 'PCDHB7', 'LOC100132287', 'LCE2B', 'RHOG', 'PRTN3', 'DHFR', 'AMHR2', 'WBSCR28', 'CELF3', 'LTBR', 'RCAN3', 'LRRTM3', 'KCNV1', 'A2M.AS1', 'MRPL44', 'ZIC3', 'DPH5', 'ELN', 'PSIP1', 'HMBOX1', 'KDM8', 'DNAJC27', 'ENOX2', 'SPATA31D5P', 'ZBTB9', 'GPR62', 'TRIP10', 'HLA.DRB5', 'NUDCD2', 'NFKBIB', 'TMEM181', 'FAM84A', 'PDIA5', 'MS4A4A', 'OR1L1', 'PAX5', 'RNF220', 'TTTY23', 'EIF4EBP3', 'SRGN', 'TST', 'NEU1', 'REEP1', 'LINC00476', 'HOXB8', 'CACNG6', 'TTC33', 'TBCD', 'SPP1', 'HIGD2B', 'C17ORF53', 'PPM1G', 'COL26A1', 'TMEM176A', 'CKAP2L', 'SLC16A2', 'TAAR6', 'OR4D6', 'SMARCAD1', 'FAM83G', 'PTPMT1', 'MKKS', 'RPAP1', 'RNF222', 'CEP126', 'ZNF140', 'NIPBL', 'SP5', 'LOC340017', 'ST6GAL2', 'NF1P2', 'SP140L', 'ABL2', 'BCAS4', 'FOXO3', 'BRINP1', 'ATXN3', 'PVRIG', 'SKOR1', 'ITGA5', 'MUSTN1', 'WDFY4', 'GAS1', 'TMCO3', 'CLCN1', 'SH3PXD2A', 'INSC', 'TRAPPC6A', 'IGFBPL1', 'EMD', 'ALPK3', 'FHL3', 'RAB8A', 'G6PD', 'BLMH', 'DTHD1', 'PTDSS1', 'SETD8', 'SPATA24', 'FBXL19.AS1', 'BAP1', 'AZIN2', 'TFAP2C', 'CATSPERD', 'PTPN7', 'VRTN', 'RAPGEF3', 'NCF1C', 'DNASE1', 'SNORD114.21', 'LANCL1', 'TAF10', 'PRR34.AS1', 'DRAM2', 'OR10R2', 'NKTR', 'PDE6C', 'SLC9A4', 'CCDC88C', 'LOC647859', 'TMEM8B', 'SLC45A2', 'SNORD115.3', 'CA7', 'TMED3', 'HSPB7', 'YTHDC2', 'PTP4A3', 'ACLY', 'LGALS13', 'FAM183B', 'ZNF223', 'CCDC85C', 'WWC2', 'NCOA1', 'HIST1H2AH', 'ABHD4', 'ZBTB33', 'MYL2', 'GALNT11', 'IFNA13', 'USP44', 'TMEM52', 'PSMD5.AS1', 'TAPBPL', 'RNF43', 'SHISA6', 'PSMA8', 'SPG20', 'ABCD3', 'IQCF3', 'CBX6', 'TDRP', 'TACSTD2', 'DAZL', 'GALNT16', 'SNORA28', 'SEZ6L2', 'PCDHB15', 'USP17L6P', 'MAPK8', 'NPNT', 'MSI1', 'CHRDL1', 'STEAP2', 'TRAPPC2B', 'HAO2', 'LINC00598', 'LINC00470', 'APBB2', 'PAFAH2', 'HAPLN1', 'APLF', 'MIR155HG', 'NPM3', 'SESN2', 'PRG1', 'NPEPPS', 'MAPK8IP1', 'RPS6KA4', 'CDHR2', 'KRTAP19.2', 'IFNB1', 'HARS', 'ADORA2A.AS1', 'TMEM114', 'C8ORF76', 'TTTY17B', 'UTF1', 'OR2L1P', 'PTGER2', 'CNTN6', 'SPNS1', 'MPO', 'MRPL36', 'DCD', 'DAD1P1', 'HRG', 'OPALIN', 'FGF11', 'CHKA', 'EIF3B', 'C10ORF105', 'PTRH2', 'LGALS8', 'SNORA31', 'TIMM44', 'PUM1', 'SYN2', 'UBASH3B', 'GALNT4', 'QSOX2', 'TNFRSF21', 'STK16', 'FTHL17', 'RIPK2', 'ANKLE1', 'ZXDB', 'PALLD', 'SLC46A3', 'MRPL23', 'PCDH17', 'MICAL1', 'GREB1L', 'PF4', 'PCYT1B', 'SFMBT1', 'ZNRF2', 'C11ORF68', 'LINC00312', 'CTNND2', 'SCO2', 'TNFSF12.TNFSF13', 'C6ORF141', 'DR1', 'RRAGC', 'TMEM30A', 'CBLN4', 'OR56A3', 'ATG5', 'SNORD115.48', 'ZNF808', 'SYNGR2', 'BLVRA', 'PCDHA6', 'SHROOM1', 'GRIN3A', 'UNCX', 'TMEM200B', 'SLC5A9', 'EBP', 'MFSD8', 'PPP2R2D', 'BAALC', 'GAB2', 'R3HDML', 'SENP1', 'KCMF1', 'SLC25A36', 'SH2D6', 'PSD3', 'DNMBP.AS1', 'LINC01465', 'NUTM2G', 'DUSP15', 'FOXD4L1', 'LINC01105', 'NME7', 'CTCFL', 'CPQ', 'KYNU', 'TUSC7', 'LYPLA2', 'TMEM143', 'ZNF138', 'PHF2', 'MDH1B', 'LINC00589', 'HENMT1', 'C19ORF57', 'RYBP', 'LINC00167', 'PRSS36', 'TRA2A', 'LYRM2', 'NRK', 'LRRK1', 'OR4D5', 'SGK3', 'C12ORF57', 'MTFP1', 'LDHC', 'AXIN1', 'KRTCAP3', 'GYG2', 'CDK5R1', 'GNPTAB', 'ASAP1.IT1', 'TTK', 'ALG8', 'KLHDC4', 'EHMT2', 'SERHL2', 'NKX3.1', 'NUFIP2', 'GRAMD1A', 'MT3', 'VDAC1', 'HPCAL1', 'FAM86C2P', 'MTHFD2', 'DPYSL2', 'LAS1L', 'HTR2A', 'H1FX.AS1', 'IHH', 'PRODH2', 'FAM155A', 'C3ORF17', 'METTL4', 'PES1', 'KIAA0753', 'MMP10', 'OR7G2', 'ZNF552', 'PXYLP1', 'CDHR5', 'FAM21A', 'TECPR2', 'SVEP1', 'GPATCH3', 'MUT', 'TMEM236', 'RIOK1', 'POLD1', 'MTO1', 'CYP2C9', 'HDAC6', 'UBR5', 'TLE1', 'C14ORF166', 'FBXO36', 'GALK1', 'OR4D11', 'FOXK1', 'RPS6KA5', 'WFDC10B', 'MRPS15', 'BAX', 'RLN1', 'TOPORS', 'SLC6A11', 'STT3B', 'CCDC103', 'PCDH11X', 'UBL4A', 'LY86', 'MECR', 'SLC6A4', 'GPRIN2', 'FERD3L', 'CAPN15', 'PA2G4P4', 'TUBD1', 'GP1BA', 'MTMR12', 'ATP6V0C', 'STARD13', 'TXLNGY', 'ATAD5', 'SLC2A3', 'TTC31', 'DNAJB8', 'SNX27', 'GOLGA6L5P', 'OR5H6', 'TBC1D3B', 'RHOBTB2', 'EDA', 'EIF3CL', 'PRICKLE4', 'BMS1P5', 'FAM129A', 'MAGEB18', 'TECR', 'CTNS', 'OR10X1', 'MASTL', 'IL36B', 'MTHFSD', 'PREX1', 'LINC00111', 'DDB1', 'HNMT', 'GPR150', 'LOC100190940', 'PLSCR2', 'ULK1', 'CYTH2', 'BVES', 'PPIAL4G', 'GEMIN5', 'FN3KRP', 'TPM2', 'GPR19', 'PDZD8', 'FCGR1B', 'TMCO4', 'ATF6B', 'CCDC121', 'MYO15A', 'GRB2', 'TEX15', 'FOXJ1', 'PIPOX', 'TCP10L', 'PRKCG', 'BRMS1L', 'ZNF19', 'SNORA41', 'ANKRD34C', 'ZCCHC6', 'LSM2', 'OR5A1', 'PPT1', 'ARRDC3', 'OR2T2', 'JADE3', 'LINC01366', 'MOSPD1', 'ERI1', 'APIP', 'RPS6KC1', 'RAB7A', 'AMELY', 'TLE3', 'IL3', 'LOC285074', 'OR6F1', 'VLDLR.AS1', 'PNPLA3', 'SLC28A1', 'TRIM47', 'CAAP1', 'CRTAP', 'KIAA1324', 'UPF3A', 'YIF1A', 'VAMP8', 'NR5A1', 'LRRC75B', 'SLC25A20', 'MAN2C1', 'LINC01600', 'C1ORF210', 'MUS81', 'FAM214B', 'GTPBP6', 'CFP', 'C20ORF27', 'TRIM26', 'ZNF579', 'SGPL1', 'KRTAP26.1', 'KIF16B', 'PAIP2', 'LOC401127', 'CHTF18', 'CNBD1', 'LRRC37A6P', 'CH25H', 'OS9', 'LOC389705', 'ZNF773', 'PAK2', 'SERF2', 'LPAR6', 'FLJ42627', 'YRDC', 'TMEM198', 'CHRM4', 'RPL11', 'TLL2', 'F2R', 'ASB13', 'CLASRP', 'RHOBTB1', 'NRADDP', 'PLEKHA7', 'TCEAL5', 'SSB', 'GRASP', 'CES1', 'CYP4F12', 'KRTAP15.1', 'RGAG1', 'DENND5B', 'HNF1A', 'AGBL5', 'KRTAP5.1', 'KCNK10', 'DXO', 'WNT8A', 'TSPAN33', 'KCNA1', 'SNORD115.27', 'TIGD2', 'SLC25A19', 'SYAP1', 'KHDRBS2', 'CXORF51A', 'PHF7', 'ZNF709', 'LGALS14', 'BCL2A1', 'DNM1P35', 'CT45A2', 'TGM3', 'TXNRD1', 'FASTKD5', 'DICER1', 'C16ORF52', 'C9ORF117', 'FIGLA', 'DLX4', 'RPN2', 'SLAMF6', 'C19ORF60', 'YME1L1', 'PITPNC1', 'WDR12', 'SOX13', 'GJB7', 'SOS2', 'VCPKMT', 'RPS13', 'ANKRD6', 'ZNF765', 'CILP', 'LSM3', 'CERKL', 'SNORD115.5', 'ZNF157', 'MEX3A', 'GJC3', 'DCAF12', 'C1ORF64', 'PYGO1', 'VPS45', 'GAGE8', 'TEX2', 'PODXL', 'BRD2', 'SLC19A2', 'CEACAM1', 'DDX28', 'KRT71', 'GXYLT1', 'STS', 'PNISR', 'DNAJC17', 'AKAP9', 'C11ORF52', 'FAM83A.AS1', 'CLCC1', 'ZNF79', 'LAIR2', 'TDRKH', 'BUD13', 'C6ORF132', 'CCDC84', 'BET1', 'TBC1D2', 'SDPR', 'MAP3K12', 'LOC441204', 'GOLPH3', 'PGLYRP4', 'DSCR10', 'SERPINB1', 'LETM1', 'FAM138E', 'KCND1', 'ALX3', 'DNAH6', 'OR1E2', 'OR7D2', 'UCP1', 'FAM207A', 'PSMC6', 'SCARNA5', 'ULK4', 'OR51B6', 'NANOGNB', 'AJUBA', 'DCHS1', 'MESTIT1', 'TIPIN', 'RPRM', 'PPM1N', 'TGFA', 'RALGAPA2', 'LAPTM4A', 'OR52J3', 'MTCH1', 'ARMCX3', 'ZMYM4', 'CHST5', 'BBS9', 'POU6F2', 'ATP5B', 'CD37', 'SEMA7A', 'UXT.AS1', 'PPP1R2P3', 'ZFP1', 'ZNF131', 'MUCL1', 'OR51D1', 'PI4K2B', 'MRRF', 'FIGNL2', 'SLC26A6', 'LOC100130691', 'SNORD116.20', 'ORC3', 'LGMN', 'HDAC11', 'SNORA70C', 'ZC3H12D', 'CD226', 'BCL3', 'KIR2DS4', 'VNN1', 'C19ORF53', 'FAM101B', 'C11ORF63', 'PRR15', 'PACS1', 'IZUMO1R', 'DPY19L3', 'USH1C', 'SMIM10', 'PITX3', 'KIAA1033', 'UNC79', 'RAET1G', 'SPOP', 'EPHX3', 'DNM2', 'MORN5', 'ZNF396', 'WDHD1', 'GTPBP2', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.8999534796539688 Spearman Correlation: 0.8386482092119079 Coefficient of Determination: 0.8098951370935983 RMSE: 0.19743393496681774 NRMSE: 0.047448674589477956 MAPE: 305.5208807501417 Pearson Correlation: -0.034358243621823194 Spearman Correlation: 0.10930246454067559 Coefficient of Determination: -3.061156917433051e+22 RMSE: 73595434582.45708 NRMSE: 26464610227.788513 MAPE: 4712472986557.732 Predictor: ElasticNet Pearson Correlation: 0.5518957836887852 Spearman Correlation: 0.518571407177952 Coefficient of Determination: 0.2767788522062582 RMSE: 0.3850886749148284 NRMSE: 0.09254714609825244 MAPE: 731.034317737318 Pearson Correlation: 0.4782458922575012 Spearman Correlation: 0.4591015510681885 Coefficient of Determination: 0.22700703751703222 RMSE: 0.3698246440607252 NRMSE: 0.13298739403097026 MAPE: 751.073645198047 Predictor: RandomForests Pearson Correlation: 0.47937208825300054 Spearman Correlation: 0.4930585894929243 Coefficient of Determination: 0.21238736582605244 RMSE: 0.4018662415978787 NRMSE: 0.0965792457577214 MAPE: 642.5754331472508 Pearson Correlation: 0.4769228754117753 Spearman Correlation: 0.4673924050917754 Coefficient of Determination: 0.21511218415289168 RMSE: 0.3726592208595591 NRMSE: 0.1340066959831562 MAPE: 798.8194785609955 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['FCGBP', 'ALOX12P2', 'ANXA9', 'IL1RL2', 'CRAMP1L', 'CENPB', 'HOXA9', 'NKD1', 'MAGOH', 'XIRP2', 'NKAIN4', 'ATG4C', 'FBLN7', 'OR2M4', 'CALCOCO2', 'PSAT1', 'MYLK2', 'MPV17L', 'CDK1', 'CLK4', 'OR4M1', 'RASGEF1B', 'NRXN1', 'MAP2K1', 'WBP1', 'FERMT2', 'VPRBP', 'A2M.AS1', 'GDF6', 'PLEKHH1', 'PWWP2A', 'DOK1', 'GJB2', 'JAKMIP1', 'ZNF678', 'SLC35G3', 'MAGEA12', 'OLFM3', 'OR4K15', 'PIGR', 'MVP', 'NR2E3', 'FSTL1', 'ZNF341', 'CD5L', 'CASC8', 'TRNT1', 'RTP2', 'FCER2', 'OR6V1', 'OR52W1', 'LHPP', 'PTK6', 'LRRC25', 'MYO1C', 'SNHG5', 'RBM15B', 'CCDC185', 'SNORD113.6', 'PFKFB4', 'RPP25L', 'CHI3L2', 'UCN2', 'DEFB114', 'TEKT4', 'BMP6', 'MRPL52', 'ELOVL1', 'TTC7B', 'SACM1L', 'DMRT1', 'ALG9', 'SNORD6', 'SLC30A8', 'SOX18', 'EVA1B', 'PLK5', 'SMIM20', 'ZNF778', 'UBE2M', 'METTL21B', 'ANP32AP1', 'SRFBP1', 'RAB38', 'CTNNA1', 'ARMC1', 'PNLDC1', 'LRP2', 'FJX1', 'NME1', 'GCSAML.AS1', 'NDUFA7', 'TEAD3', 'PRICKLE4', 'ARID2', 'TMPRSS13', 'H2BFWT', 'FYB', 'C16ORF91', 'FAM106CP', 'RSPH14', 'FRMD1', 'TMPRSS11D', 'KCNF1', 'SNORD79', 'BST2', 'FUT2', 'PNPLA1', 'ACBD7', 'LINC00893', 'FAM92A1P2', 'TMEFF1', 'LINC00592', 'AARS2', 'MAGEB3', 'SULF2', 'OPN3', 'FAM95B1', 'GTPBP8', 'ACOT13', 'ITGAX', 'TMEM170B', 'SLC39A3', 'FAM195A', 'ITPR2', 'UPP1', 'HSPB11', 'LOC441666', 'USP48', 'GPHN', 'HGFAC', 'CCDC73', 'RHOA', 'USP42', 'TMEM217', 'NAGLU', 'DNAJC25.GNG10', 'L2HGDH', 'PGGT1B', 'BDH1', 'CHAF1A', 'ZNF382', 'STX17', 'FRMD6', 'AFAP1.AS1', 'LDLRAD3', 'SMARCA5', 'MPHOSPH9', 'AIP', 'RGS16', 'SLC11A1', 'MYH10', 'ZYX', 'PARP15', 'DENR', 'CSNK2A3', 'PNISR', 'DOK2', 'LINC01547', 'AADACL3', 'SLC35A1', 'CHAC2', 'ZNF334', 'RDH5', 'TIMD4', 'SIPA1L3', 'SH3BP2', 'THOC5', 'CCL18', 'TXNDC9', 'SLC7A5P1', 'SLC1A6', 'SLC30A7', 'GNAI2', 'ATP6V0D2', 'PPAPDC1B', 'ZNHIT2', 'C21ORF91', 'SLC24A5', 'PEX12', 'AOX1', 'TNNT2', 'SNX17', 'MEA1', 'LGSN', 'FAM47E', 'STOML2', 'RHBDD2', 'APOA2', 'LBR', 'MTRF1L', 'KISS1R', 'SFXN2', 'PRPF4', 'PLEKHD1', 'LRRC45', 'DKK2', 'SLC2A4', 'FAM204A', 'CFHR4', 'TFPT', 'RGPD8', 'DACT2', 'LIN7B', 'OR4N2', 'RPL11', 'NEK4', 'HEATR5A', 'BTF3L4', 'LDOC1', 'LOC388242', 'ACAN', 'MYH3', 'DCDC2', 'TROVE2', 'CRYBA2', 'DGAT2', 'ASIC4', 'CDK19', 'C3ORF84', 'SULT1C3', 'COX7B2', 'IL11', 'GIGYF1', 'EDEM2', 'NCAM1', 'CORO7', 'C17ORF97', 'CNNM4', 'KATNB1', 'NAA20', 'SLC39A11', 'TTC29', 'OR2F2', 'RNF219', 'ZNF653', 'OR2A9P', 'IL13', 'C4ORF50', 'CNTROB', 'PROSER3', 'DSTN', 'TTC39B', 'PAX7', 'AATBC', 'ERCC1', 'TYK2', 'MFRP', 'OR1N1', 'CXORF36', 'PBXIP1', 'PHYHIP', 'SLC15A2', 'HCG18', 'ZNF813', 'ITGB7', 'IL1RAPL2', 'CPTP', 'NAT16', 'LSM3', 'RPL3L', 'SOX3', 'RAB22A', 'MSGN1', 'ENG', 'IPW', 'FMO1', 'FBXL22', 'TNFAIP8L2', 'NLRP1', 'TCL1A', 'DPP9', 'LRFN1', 'DEGS1', 'FIGF', 'TMPRSS11B', 'SPDYE5', 'CBX4', 'IHH', 'ARCN1', 'RNF141', 'DACT3', 'CNGB3', 'API5', 'AJUBA', 'ZNF626', 'DNASE1L3', 'SLC25A18', 'FSCB', 'ASB13', 'GOLGA2P6', 'PDIA5', 'SLC2A13', 'SPATA45', 'REPS2', 'BCL11A', 'EPHA5', 'PSG6', 'CXORF40A', 'PRDM12', 'XKR4', 'SNRPF', 'SLC6A17', 'UPRT', 'METAP1D', 'CCKAR', 'DZIP1L', 'PCDHB5', 'HPCAL4', 'FREM1', 'TSPYL4', 'HSPB7', 'PITRM1', 'NUDT18', 'CLEC2D', 'ACACA', 'ZNF213', 'SNORD19B', 'C1GALT1', 'SFR1', 'DHX37', 'EWSR1', 'PTGES2.AS1', 'RPE', 'TRIM28', 'MAP6', 'GDPD5', 'TRIM37', 'EFR3B', 'SCLT1', 'ACTBL2', 'PCBD2', 'C4ORF22', 'TLR8', 'PAX4', 'PRKD3', 'PTP4A2', 'ZNF611', 'C1ORF100', 'PROS1', 'WISP2', 'PRRC2C', 'FBXO44', 'MRPL46', 'NME1.NME2', 'ELL3', 'STRAP', 'AKR7A3', 'NBPF9', 'TBC1D5', 'NPS', 'CD40', 'TNFRSF14', 'CHD4', 'NT5DC3', 'P2RY12', 'CDK17', 'ST3GAL1', 'ARHGEF19', 'DPH3P1', 'GOLGA2P7', 'NBPF22P', 'AADAT', 'GDE1', 'RAB3C', 'UBQLNL', 'TAS2R19', 'PPP2R1B', 'CADM3', 'MOSPD1', 'SIX1', 'LCMT1', 'INTS4P2', 'PDE1B', 'SMPDL3B', 'PDZRN3', 'FBXO48', 'RPUSD2', 'MAP4', 'SLX4', 'LIN28B', 'PCDHB2', 'MAGEB2', 'SLCO6A1', 'FOXC2', 'ZDHHC21', 'ZCCHC12', 'OR2A2', 'TRIM35', 'PARK2', 'DPH1', 'OR5W2', 'PRAMEF10', 'ESPNL', 'HIST2H2BF', 'EDEM3', 'TPPP3', 'PLA2G2F', 'COL6A4P2', 'ETAA1', 'F3', 'ZNF677', 'TRIM17', 'ABCF1', 'SVIP', 'RAB9B', 'POLR1B', 'TIMM9', 'TEX14', 'APOA1', 'C17ORF75', 'MCM7', 'ECI2', 'TRAF3IP2', 'GJA9', 'OSTN', 'FRMD4B', 'R3HDML', 'EEF1E1', 'OR52B6', 'FAM162B', 'RBM34', 'MMD2', 'HEATR4', 'FOXA2', 'KRTAP5.4', 'ZBTB22', 'SERTAD4', 'TBP', 'JHDM1D.AS1', 'SLAIN2', 'SRSF2', 'PPP6R3', 'PRMT2', 'TMEM155', 'AGAP11', 'SMAD9', 'DKFZP434J0226', 'RAX', 'FAM160B2', 'INSL3', 'GPR173', 'CRBN', 'SFMBT1', 'MCPH1', 'TPM3', 'MMP13', 'C11ORF96', 'OR51G1', 'OR13C4', 'ATF7IP', 'HIST2H2BA', 'C16ORF82', 'HMG20B', 'SPA17', 'OTUD6B', 'OR8G2', 'PSKH1', 'UNC119', 'RAB11FIP5', 'KLF3.AS1', 'CHMP1B', 'RAB8A', 'SVIL', 'ART5', 'HILS1', 'SMAD5.AS1', 'DGKQ', 'OR5B12', 'RSRP1', 'STRC', 'GTF2H4', 'ASF1B', 'LIPM', 'PHKB', 'MGC2889', 'LMX1A', 'INTS7', 'IMMT', 'DLD', 'LANCL2', 'C11ORF52', 'C1ORF68', 'TM2D3', 'RHPN2', 'ADAT3', 'PIK3C2B', 'OPN1SW', 'C7ORF72', 'BASP1', 'ZNF184', 'BTN2A1', 'ARF4', 'ZNF667', 'PAIP1', 'SDR42E1', 'CCDC103', 'MCTP2', 'IFT57', 'TTLL2', 'FAM200A', 'FBXL14', 'DDHD2', 'RAP1GAP2', 'RREB1', 'PCDHB8', 'PDRG1', 'USP53', 'DUSP21', 'VRK3', 'FAM136A', 'CSK', 'LBP', 'AKR1D1', 'ARL6', 'SNORD116.29', 'FTLP10', 'MRPL38', 'C1ORF61', 'TXLNGY', 'ORC1', 'PRSS30P', 'SLC8B1', 'METTL7A', 'ZC3H12D', 'SNORA55', 'SPNS1', 'CYP4F22', 'LPCAT4', 'C20ORF27', 'PNO1', 'RNF182', 'FAM217A', 'NUP37', 'XPC', 'RHOH', 'DPYSL5', 'URB1.AS1', 'TMEM154', 'C6ORF15', 'EVA1A', 'SRPR', 'TIMM13', 'CLEC4M', 'OR51V1', 'HNMT', 'LINC00160', 'TPD52', 'OR5M8', 'TBL2', 'PTGDR', 'EMILIN2', 'CCDC54', 'ZNF426', 'PHF5A', 'C5ORF64', 'DPRXP4', 'FLRT1', 'ANKMY2', 'TPTE2P3', 'SNORA70C', 'DNAJC13', 'LCE1C', 'APOBEC2', 'PCDH7', 'COMP', 'ADIG', 'DENND1C', 'LINC01565', 'MINPP1', 'CDKN2B', 'IDNK', 'DTNA', 'SLITRK1', 'PRKRIR', 'MED1', 'EVI5', 'GLP2R', 'C2CD2L', 'F2RL1', 'GSTZ1', 'GPR82', 'SLIT3', 'STK26', 'ATAD5', 'LAMA5', 'OR2T11', 'KIAA1671', 'ST13', 'COX6A2', 'ZNF41', 'GPC4', 'GMPPB', 'METAP2', 'PCYT2', 'SLAMF7', 'CHRNA7', 'POC1A', 'OR2C1', 'GFAP', 'RASA4', 'ASPHD2', 'FIGLA', 'LACC1', 'SUPT7L', 'PTAR1', 'MIXL1', 'FDXR', 'C7ORF73', 'SIGMAR1', 'ATPIF1', 'KIZ', 'OR51M1', 'CCDC102B', 'PPP2R3A', 'SH2D1A', 'RPGR', 'CENPP', 'SLC52A1', 'OR6T1', 'FHL5', 'DEFB135', 'SLC35E3', 'KRT6C', 'MYO5C', 'RBMY1F', 'IRF2BP1', 'PCYOX1', 'C2ORF57', 'SEL1L', 'BAZ1A', 'ADCY8', 'MEPCE', 'PRR14', 'SMAD3', 'HIGD1B', 'RANGRF', 'ZNF511', 'DTNBP1', 'NFKB2', 'MED29', 'SLC6A15', 'BRICD5', 'SLC17A2', 'GSDMD', 'VSX1', 'MMP23B', 'GPIHBP1', 'PLBD2', 'ZNF226', 'CTAGE5', 'CISD2', 'PGLYRP3', 'ACTRT3', 'CAPN5', 'KCNK2', 'TNFRSF4', 'HDX', 'CCDC78', 'MRPS23', 'ZAK', 'TNS2', 'TPPP', 'AMD1', 'CXORF56', 'EIF4E3', 'ANGPTL6', 'DUSP6', 'IL18RAP', 'SERPINB8', 'PLBD1', 'BLOC1S3', 'PDE12', 'C10ORF10', 'ANKRD22', 'TMEM156', 'SPRR3', 'CAPN7', 'PANK4', 'GDAP1', 'NCBP1', 'CCL7', 'CAMTA1', 'DUSP15', 'TFAP2B', 'APOPT1', 'NFKBID', 'CEP68', 'CARKD', 'SLC35F3', 'SCN1A', 'SEC61G', 'ETFA', 'PRAMEF16', 'UGT2B15', 'HAUS7', 'GABRB2', 'IRGQ', 'C2CD2', 'CD300E', 'GUSBP5', 'LOC284379', 'TSPO', 'PHOX2B', 'ZNF781', 'METTL21A', 'TRPV5', 'DTYMK', 'LRRC56', 'NMS', 'HOXB5', 'MRPL44', 'SERPINE3', 'RPPH1', 'SNORD25', 'KMT2D', 'SLC16A5', 'SNORD115.7', 'ZNF416', 'SNORA81', 'ATP5D', 'TRAPPC2', 'ZNF578', 'MAPKAPK5.AS1', 'UGT3A2', 'OS9', 'TRPS1', 'ZCCHC7', 'SOX2', 'NCF2', 'BEST2', 'PRG3', 'GPR65', 'ZP2', 'TM6SF1', 'SULT1A1', 'POLR2G', 'OSBPL9', 'DRC7', 'TAS2R46', 'LRRC7', 'PHKA1', 'ARHGAP30', 'HMGN3', 'TIFAB', 'TTF2', 'NFYC.AS1', 'CTBP2', 'RDH11', 'APBA1', 'FZD5', 'PTCD1', 'OR51T1', 'KCNS2', 'KRT82', 'OR1J1', 'PIWIL1', 'PCBP3', 'ABR', 'POLA2', 'PRX', 'EGR4', 'DLEC1', 'MANBA', 'PSEN2', 'CSMD3', 'NEUROD2', 'ZNF777', 'ANO9', 'SLC25A51P1', 'SNORD4A', 'SERPINB4', 'LPPR3', 'MAGEC1', 'TMEM231', 'SLC16A11', 'COPS3', 'NDST2', 'RGMB', 'RAB15', 'LARS', 'THYN1', 'TRIML2', 'THAP10', 'SIRT5', 'IL15RA', 'KIF18A', 'ZNF33A', 'EEF2', 'MAGEL2', 'ZSCAN25', 'KANSL3', 'HGF', 'RTN4', 'FEZF2', 'YWHAQ', 'PSTK', 'HOXB6', 'ZNF322', 'FOXRED2', 'PMS2P4', 'KDM4D', 'ENO2', 'OR4D5', 'ABCA11P', 'SEPT7P2', 'TOR1B', 'UNC5A', 'TMEM119', 'TREML5P', 'FIS1', 'SPINK9', 'CD164L2', 'SLC13A2', 'OR2C3', 'HHATL', 'C8ORF33', 'TMOD2', 'MCOLN1', 'NUGGC', 'ZNHIT6', 'SLC26A8', 'PSMC3', 'TSPAN5', 'SERINC3', 'ALG14', 'SLFNL1', 'MCMBP', 'OR2AK2', 'NAP1L5', 'BIVM', 'LRRC69', 'ZBBX', 'ANO2', 'TCIRG1', 'APBB1', 'CRLF1', 'DSCR3', 'LRRC52', 'ZNF19', 'FOXC1', 'FAM3B', 'MDM2', 'RAC3', 'EFCAB6', 'ATP1B1', 'STAB2', 'SNORD116.23', 'MIIP', 'PAX1', 'ZC3H8', 'TOR3A', 'MVK', 'C8ORF34', 'FMO4', 'RNF39', 'SMUG1', 'FAM138F', 'OR7C2', 'MMP17', 'SDC3', 'IFNK', 'ERICH5', 'CXADRP3', 'C12ORF77', 'PSAP', 'ANXA3', 'SUSD1', 'OCRL', 'P2RY6', 'LCN10', 'IL1RAPL1', 'WIPI2', 'TJAP1', 'TMEM9', 'FAM196B', 'RFFL', 'MORF4L2', 'LRP2BP', 'ITGA8', 'KATNBL1', 'ZDHHC14', 'NOXA1', 'FAM209A', 'C9ORF171', 'CBLN3', 'TPTE', 'SCAND2P', 'LINC00341', 'ASB16', 'MFSD7', 'KLK1', 'RAPGEF2', 'ATRNL1', 'ZDHHC22', 'ICOSLG', 'SATB2.AS1', 'REV1', 'TNPO1', 'ATL2', 'LINC01554', 'UQCRHL', 'SNORA8', 'PAIP2', 'EPHA4', 'ARFGAP1', 'FEN1', 'ALOX5AP', 'CCDC82', 'MOGAT3', 'SIKE1', 'ZNF571', 'ANGPTL3', 'KLHL12', 'C14ORF166', 'PER1', 'CABP7', 'SHB', 'RET', 'MYO1E', 'MTHFD1', 'RB1CC1', 'NLE1', 'CEACAM21', 'KRT17P5', 'FSD1', 'RAPGEFL1', 'TSG101', 'WDR81', 'LRRC61', 'ARL6IP5', 'C5ORF15', 'DUT', 'ERRFI1', 'LINC00661', 'CNOT11', 'POGK', 'SLC6A11', 'MAP1LC3B', 'TRIM49D2', 'ARL14', 'OR2AG2', 'C2CD4C', 'SMARCD3', 'FAM109B', 'G6PC3', 'MSMP', 'OR52E8', 'LOC344967', 'MIEF2', 'CCDC177', 'CTR9', 'FOXJ2', 'SNORA66', 'DNAJC30', 'PSENEN', 'VRK2', 'LYPLAL1', 'GPR17', 'SDK1', 'HSPA1B', 'DEFB110', 'TSG1', 'SUB1', 'SIM2', 'DBX2', 'PRKCA', 'RAB42', 'AGGF1', 'ZFP62', 'RPL23', 'SKAP1', 'FOSL2', 'CYP4V2', 'ZMIZ1.AS1', 'ROGDI', 'LOC388955', 'MGC57346', 'C9ORF50', 'SCARNA9L', 'ZNF430', 'MTMR3', 'TBC1D22B', 'HYAL3', 'OR52A5', 'HLCS', 'ZNF222', 'SLC22A1', 'CHD8', 'NFE2L3P2', 'MAX', 'AVPR1A', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 0.8962389405868062 Spearman Correlation: 0.8896482405470743 Coefficient of Determination: 0.8029989910669187 RMSE: 0.32722032230226833 NRMSE: 0.06594923560518942 MAPE: 293.00145784798707 Pearson Correlation: -0.08396039230669851 Spearman Correlation: 0.13788007194720195 Coefficient of Determination: -1.8436517279530144e+23 RMSE: 322444486920.135 NRMSE: 79999128397.79066 MAPE: 24716452846790.934 Predictor: ElasticNet Pearson Correlation: 0.6351051880162676 Spearman Correlation: 0.6236574538302829 Coefficient of Determination: 0.3696875968777742 RMSE: 0.5853073387407441 NRMSE: 0.11796508026296314 MAPE: 419.2904088200419 Pearson Correlation: 0.3854236494277478 Spearman Correlation: 0.36604721490586284 Coefficient of Determination: 0.139321073102452 RMSE: 0.6966844197678346 NRMSE: 0.17284881153372567 MAPE: 246.86920421662157 Predictor: RandomForests Pearson Correlation: 0.4751907734786614 Spearman Correlation: 0.4717225939055101 Coefficient of Determination: 0.16289702084324797 RMSE: 0.6745210177827223 NRMSE: 0.13594554644229243 MAPE: 600.5320518734235 Pearson Correlation: 0.4447741976788496 Spearman Correlation: 0.36966149643937185 Coefficient of Determination: 0.12723260440728412 RMSE: 0.7015599207355059 NRMSE: 0.17405843317012504 MAPE: 279.9986158150654 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['MOS', 'TTTY5', 'FAM111B', 'ASB1', 'CST13P', 'PLA2G4D', 'KIR2DL4', 'MSANTD2', 'C2ORF69', 'MED21', 'POLR1C', 'TCAF1', 'PHF14', 'GPHN', 'CCDC97', 'BLOC1S3', 'ZNF304', 'USP40', 'TACC1', 'SLAIN2', 'FAM78A', 'PTP4A3', 'SPIRE1', 'MVB12A', 'KMT2B', 'FXYD7', 'TGFBI', 'PDE6D', 'WFDC10B', 'ZUFSP', 'TTF2', 'AMZ2P1', 'ANLN', 'AFF1', 'ZYG11B', 'TBCEL', 'LOC645752', 'LINC01566', 'HS3ST1', 'DNAJC1', 'PROKR2', 'WFDC5', 'GOLPH3L', 'VENTXP7', 'OGT', 'SKA3', 'OGFOD3', 'CAGE1', 'PRSS16', 'IRF9', 'LINC00606', 'AFAP1.AS1', 'FRAS1', 'PLEKHN1', 'UBE2E2', 'ARL15', 'LRRC71', 'ZNF398', 'GPR32', 'MFF', 'LTK', 'FTH1P3', 'FN3K', 'SLC34A1', 'TAS2R60', 'CFTR', 'HERC5', 'SH3BP5L', 'ENTPD7', 'MPLKIP', 'FBXL8', 'FAM45A', 'MAPT.IT1', 'VWA1', 'GPR19', 'STK32C', 'NR5A2', 'SULT1E1', 'PMM1', 'CCDC64', 'MAPK10', 'MBD3', 'CTXN2', 'PDZD4', 'CDC123', 'SPATA32', 'GABRB1', 'SLC7A13', 'ARHGEF11', 'LGALS13', 'FGF12', 'P4HTM', 'ZGRF1', 'DKK1', 'SNORD53', 'UQCC2', 'ANKRD29', 'ARPC2', 'MT1IP', 'DHRS2', 'LPP', 'ADIPOR2', 'SLC2A8', 'LOC115110', 'POF1B', 'ZNF184', 'SLC23A3', 'PRSS30P', 'CCDC106', 'LIN9', 'VRK2', 'HMG20A', 'VAPB', 'DNAJC2', 'GTPBP6', 'PAGE2B', 'TOP3B', 'FUT2', 'GRXCR2', 'SNORA46', 'MYL6B', 'PINK1', 'MAGEA12', 'FAM21C', 'KMT2A', 'GPR183', 'NBL1', 'PCDHAC2', 'OR2T2', 'POMZP3', 'CXORF57', 'CLN6', 'NLRX1', 'NFKBIZ', 'NOMO3', 'CACNG6', 'TRIM74', 'SIDT2', 'UBL3', 'HRH1', 'MSTN', 'NEK7', 'ADCY7', 'CDH15', 'CRELD1', 'SMIM12', 'FAM208B', 'UNC93A', 'MYBPHL', 'TMEM130', 'OSBPL11', 'RAB11FIP2', 'PPIE', 'NOP58', 'CYSLTR2', 'CPA2', 'GPAA1', 'KIAA1257', 'KLK3', 'ACOX2', 'OR4C45', 'PRAP1', 'PAOX', 'STK10', 'CT45A2', 'HMCN1', 'LENG8', 'ADD2', 'NCOR2', 'DHX15', 'OR2F2', 'ACOT7', 'REEP2', 'XPO5', 'EVI2A', 'PKIB', 'LOC441666', 'MAP1A', 'ZNF397', 'C2ORF15', 'COQ4', 'VAX2', 'ANXA10', 'TUBB8', 'C8ORF82', 'CHRAC1', 'POM121L10P', 'C2CD4C', 'RNASEH2A', 'IFNA7', 'DDX1', 'SAPCD2', 'PAX5', 'CSDC2', 'SUPT4H1', 'KCNH2', 'CYP4F30P', 'ADAMTS16', 'PTK7', 'RALGPS2', 'GATC', 'C20ORF202', 'TATDN2', 'TIAM1', 'MPZ', 'LINC00899', 'HRASLS2', 'FAM83B', 'LGALS8', 'LINC00482', 'SCHIP1', 'TDGF1', 'E2F2', 'LAP3', 'UBE2Q2', 'VANGL2', 'IFNK', 'FAM167A.AS1', 'C2CD2L', 'COMTD1', 'REC114', 'PAQR4', 'DCAF15', 'KRTAP19.7', 'TMED2', 'ZNF524', 'ANK2', 'TMEM168', 'CNTNAP2', 'CWC25', 'SBDSP1', 'GJA5', 'PGA3', 'IMPDH2', 'KIAA1467', 'MPZL1', 'NLRP12', 'PIDD1', 'CATSPERG', 'NDUFA3', 'ZNF688', 'INSM2', 'ABCA8', 'CHCHD2', 'MARCKS', 'CACTIN', 'ZMAT1', 'MEPCE', 'IL13RA1', 'SNORD15A', 'SRFBP1', 'EIF1AD', 'RANBP6', 'TRIM17', 'METTL5', 'UG0898H09', 'ACTR10', 'CXADRP3', 'ZNF19', 'RBMXL3', 'PKD1L3', 'ZAR1L', 'OR5M3', 'XPR1', 'NAP1L5', 'SNORD62A', 'PROP1', 'SLC35B3', 'NEO1', 'OR5AC2', 'VPS41', 'IL1RAP', 'ELP4', 'SERINC4', 'PCDHGB4', 'CKB', 'FBXO2', 'TERF2', 'WDR31', 'SGK223', 'DCAF12L2', 'LY86', 'ERICH1', 'ERICH4', 'BRWD3', 'HECTD2', 'ZP3', 'ABCA1', 'B2M', 'PIK3C2A', 'ADRA1D', 'LCE1C', 'SGCE', 'PCNP', 'TRAF2', 'AP2M1', 'RAB11FIP5', 'MYO1B', 'METTL21C', 'ELOVL3', 'RBM33', 'GPATCH2L', 'NKX2.1', 'MYRF', 'RMI2', 'NAB2', 'ENTPD2', 'LRRN1', 'GKN1', 'ADGRD1', 'TNRC6B', 'PRO0611', 'NRXN2', 'ZNF614', 'PHLDB3', 'C2ORF78', 'PRR23C', 'SAXO1', 'ASAP1.IT1', 'C11ORF70', 'LAMP3', 'FAM9B', 'SLC17A9', 'NCR2', 'RGL2', 'SNORD73A', 'ATP4B', 'ATP2A3', 'NAT10', 'OSBPL10', 'SEC11A', 'MRVI1', 'HCFC1', 'SHARPIN', 'PIEZO2', 'TMEM244', 'SFTA3', 'KLHL28', 'ITGAE', 'SPPL2B', 'OR1C1', 'PTPRE', 'CDH10', 'SNCAIP', 'HIC1', 'PLG', 'SH2D3A', 'CASP4', 'SON', 'WRB', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.5210408978318133 Spearman Correlation: 0.431165640147048 Coefficient of Determination: 0.018885674368924188 RMSE: 0.4790821624583755 NRMSE: 0.11561699989342267 MAPE: 113.7043389605567 Pearson Correlation: -0.01691327088329989 Spearman Correlation: 0.3003571017137838 Coefficient of Determination: -2.5062646293326614e+23 RMSE: 268856234823.17258 NRMSE: 95763574291.42389 MAPE: 7784884110840.408 Predictor: ElasticNet Pearson Correlation: 0.5964081598569564 Spearman Correlation: 0.5218741493982612 Coefficient of Determination: 0.33418615735381063 RMSE: 0.3946631725779331 NRMSE: 0.09524414715783795 MAPE: 91.26387933546006 Pearson Correlation: 0.647278394977802 Spearman Correlation: 0.5323041654472734 Coefficient of Determination: 0.35058046566114254 RMSE: 0.43278213372755553 NRMSE: 0.15415214024133767 MAPE: 61.73151422874981 Predictor: RandomForests Pearson Correlation: 0.5980547520190452 Spearman Correlation: 0.4915775519609692 Coefficient of Determination: 0.27681834198624056 RMSE: 0.41131438074800386 NRMSE: 0.09926258675772953 MAPE: 100.12341093269764 Pearson Correlation: 0.6132235374406412 Spearman Correlation: 0.458690025283624 Coefficient of Determination: 0.26079205786801074 RMSE: 0.4617319871496959 NRMSE: 0.1644637532144954 MAPE: 68.99835687438369 Protein: CCND1 x_train_column_count: 859 x_train columns: ['SNORD88A', 'HSD11B1', 'SDC4P', 'IFNA17', 'LINC00461', 'HCN3', 'GORAB', 'RUFY3', 'HLA.H', 'CLK4', 'GFI1', 'ZNF85', 'KCNK4', 'TNPO2', 'ARHGDIA', 'ZBTB21', 'OR4F15', 'RYR2', 'KHDC1', 'ZSWIM5', 'RIPK3', 'IFT46', 'FAM212A', 'ASZ1', 'LRRC28', 'ZC2HC1C', 'RNF185', 'C1ORF177', 'SMIM4', 'FKBP3', 'POLR3B', 'MACF1', 'LOC400736', 'NRSN2', 'ZNF182', 'PCID2', 'KDSR', 'DNAJC12', 'USP20', 'CENPL', 'BNIP3', 'WWP1', 'NMUR1', 'SLC35A4', 'GRXCR2', 'COL13A1', 'ADI1', 'TTYH1', 'CEACAM22P', 'ZNF136', 'C5ORF56', 'MRPL52', 'ZNF578', 'PDAP1', 'IRAK2', 'SQLE', 'THEM4', 'UTP15', 'RPS28', 'NSUN6', 'SAA4', 'CALN1', 'ASB6', 'TNN', 'FAM95B1', 'PHLDB2', 'KCNH2', 'PCYOX1', 'ATXN1', 'C2ORF27A', 'UMODL1', 'IZUMO1', 'ANKRD30A', 'OGFOD3', 'SERPINB7', 'DDX23', 'TRMT10C', 'ARHGAP19', 'SLC28A3', 'ANKRD19P', 'GINS4', 'EXTL1', 'LRRC19', 'CCDC53', 'PARP4', 'BSND', 'PSMB5', 'POPDC2', 'TMEM109', 'PFN1P2', 'MRM1', 'GRAMD4', 'ADARB1', 'SPHKAP', 'BICD1', 'MEOX1', 'PWP1', 'ERGIC2', 'LCMT2', 'SLCO1B3', 'RNF17', 'N4BP2L2.IT2', 'PANX1', 'ACTA2', 'PLGLB2', 'TMEM219', 'CEP162', 'UBQLN4', 'LUC7L3', 'LINC00239', 'SHOX', 'UBAP2L', 'B9D2', 'RTN4IP1', 'SNTB1', 'SNORD55', 'TGM2', 'GPER1', 'NPFFR1', 'HYLS1', 'SLC51B', 'F12', 'ATXN3', 'CSRP2', 'NDUFAF3', 'SLC5A7', 'AMHR2', 'GFRA4', 'AOC4P', 'ATCAY', 'KRTAP19.3', 'PRX', 'WDSUB1', 'ISL2', 'JTB', 'DDTL', 'PM20D2', 'SIRPB2', 'SEMA3C', 'ESYT1', 'ZNF793', 'GFRAL', 'MAP3K10', 'EVX2', 'SLC38A10', 'COG1', 'FRMPD2B', 'POLR2A', 'ZNF528', 'ARL10', 'SNURF', 'TMEM127', 'FAM192A', 'HIST2H4A', 'SUGP1', 'ZIC1', 'RALB', 'GPA33', 'PRR26', 'LTBP4', 'LINC01001', 'LINC00887', 'DPM2', 'ZNF556', 'SPRY3', 'SLAMF1', 'IFI30', 'MGEA5', 'RAD51AP1', 'EBI3', 'IQSEC3', 'SLC38A4', 'SCARNA9', 'ANKS1A', 'TAS2R1', 'EFCAB8', 'CDS2', 'XAB2', 'TUBB2A', 'RNF214', 'XIRP1', 'TEX14', 'DISP2', 'FAM117A', 'NIPAL1', 'EPX', 'MEF2BNB.MEF2B', 'PTDSS1', 'SLC5A4', 'TTLL6', 'DKFZP434H168', 'CCNE1', 'HBA2', 'A2M', 'C19ORF52', 'HPRT1', 'CD209', 'S100A13', 'TGIF2LY', 'GAS2L2', 'TTC13', 'URB1.AS1', 'TAGLN2', 'RASL12', 'CFAP52', 'ZMYND8', 'PLEKHA5', 'ARHGAP26', 'LINC00152', 'CRYGD', 'STK24', 'TMEM229B', 'NLGN4X', 'LOH12CR1', 'CAND1', 'PPP1CC', 'DNAAF3', 'DNAJC3', 'PTRF', 'C15ORF56', 'CYP46A1', 'RGS20', 'STK26', 'TOMM40', 'MAPKBP1', 'BMF', 'INTS4P2', 'FRMPD1', 'TBCCD1', 'ZNF33B', 'PSMA7', 'TRIM25', 'PPWD1', 'SNORD116.1', 'SOCS7', 'SNAR.H', 'VPS13C', 'KIF13A', 'KIN', 'WAS', 'ITPRIP', 'MCUR1', 'NAGLU', 'GPAA1', 'LSM5', 'H2BFWT', 'FOXS1', 'KRTAP1.1', 'USP39', 'TTC5', 'IMP4', 'RNF31', 'IL27', 'RBL1', 'C9ORF43', 'ZIC3', 'RBM15B', 'QSOX2', 'CD24', 'SCN5A', 'RCN2', 'SPATA7', 'SEC24A', 'TAPT1', 'EMILIN2', 'SNORD116.11', 'SNORD116.27', 'FBXO31', 'ACVR1C', 'TMEM184B', 'ASH1L', 'SLC17A7', 'GDE1', 'CUL7', 'IFNL1', 'VN1R1', 'ABT1', 'IGLL1', 'DDX11', 'ACBD5', 'TMEM60', 'METTL7B', 'TIMM10', 'BRPF1', 'MMP15', 'CNR2', 'MAP7D2', 'SNRNP40', 'ARMC8', 'IFNA8', 'PLIN5', 'PCDHGB5', 'GAD1', 'JADE2', 'PRDM2', 'TRMT2B', 'FAM13C', 'CANX', 'MYLPF', 'FAM150A', 'STX16', 'OR52E2', 'CCDC54', 'MGMT', 'CYLC1', 'GJC3', 'TSC2', 'POU1F1', 'OR4D5', 'CYHR1', 'SLC9A4', 'DBIL5P', 'FBLN7', 'NTN4', 'LDHAL6B', 'CCDC40', 'CCL2', 'SNORD77', 'INE1', 'ATP1A1.AS1', 'CP', 'NUAK1', 'GPR161', 'F2R', 'UBXN6', 'GYPA', 'IFNA16', 'SMYD1', 'SNORD126', 'SRBD1', 'TFCP2L1', 'ALG11', 'MFSD6L', 'AK8', 'VSIG10L', 'SCARNA15', 'CRYGS', 'IGSF9B', 'CCNH', 'EPB41L4A.AS1', 'LINC00303', 'ABCB6', 'CEP104', 'TMEM199', 'TMEM141', 'CDH20', 'RXRG', 'USP6NL', 'LILRB2', 'WDR90', 'GPRASP1', 'NUP107', 'TOLLIP', 'CTDSP2', 'SPRR2F', 'CGB2', 'CPN1', 'SF3B5', 'DOC2A', 'ATP7B', 'RBM4B', 'XRN2', 'RPA3', 'LPPR1', 'CWH43', 'NAA40', 'MMS22L', 'LRRC6', 'PWP2', 'TMUB2', 'OR9Q1', 'RELB', 'KIF14', 'ZSCAN18', 'UVSSA', 'SPINT3', 'CDH11', 'SPAG5', 'H1FX', 'RPN2', 'PIK3R2', 'COA4', 'CHM', 'KLF1', 'RAMP2.AS1', 'ITFG1', 'CLSPN', 'CHODL', 'NACAD', 'CDS1', 'TLR2', 'DANCR', 'TTC14', 'MIXL1', 'C3ORF35', 'ZSCAN12', 'WIPF1', 'KIAA1804', 'KCNQ1OT1', 'SNAP25', 'LLGL2', 'TMEM121', 'SORBS3', 'SUPT20H', 'C12ORF75', 'SIX1', 'SNORA81', 'ADAD1', 'SLC11A2', 'SYTL1', 'SFTPB', 'SCNN1A', 'MRPS22', 'GNB2', 'RAB37', 'KLHL15', 'SAMD8', 'CDH22', 'GTPBP2', 'DDX12P', 'AMZ1', 'CECR5', 'IPO4', 'DZIP1L', 'CRISPLD1', 'ALDH3B2', 'CATSPER1', 'ZNF287', 'LRCH3', 'C17ORF102', 'PDE4DIP', 'DAP', 'SNORD116.12', 'ARSD', 'CITED1', 'SORBS1', 'PROC', 'PRRG4', 'DAB2', 'HNRNPA1P33', 'GOLGA6L6', 'KLKP1', 'COL20A1', 'HIST1H3J', 'GP2', 'MRE11A', 'GSTM2', 'SNRNP70', 'AGAP4', 'PABPC1L2B', 'HNF4G', 'ZSCAN31', 'BCL10', 'BPIFB2', 'C7ORF61', 'RADIL', 'PDE6G', 'RFPL3S', 'LINC00634', 'FOXI3', 'SERP2', 'KCNT1', 'NAPRT', 'TMLHE', 'IFIT5', 'GNPNAT1', 'C7', 'NUDCD3', 'CTAGE6', 'PIGQ', 'RPL3L', 'NAALADL1', 'COX17', 'NSA2', 'CCRL2', 'PRSS3P2', 'SNORD71', 'CDC42BPB', 'DNAH5', 'SQRDL', 'SOAT1', 'KLF4', 'PPP1R3A', 'SYNC', 'INTS4P1', 'IL10', 'ABHD3', 'RNF13', 'GAL3ST1', 'FAM201A', 'FBF1', 'NCKAP1L', 'SNORA71A', 'LCN8', 'IGFBP4', 'SNAR.C3', 'LARP6', 'ZNF416', 'RENBP', 'IBSP', 'TMEM179B', 'DIXDC1', 'UNC5B', 'DTX2', 'RPRD1A', 'IFITM5', 'C1ORF123', 'TACC2', 'TXNDC12', 'PSD2', 'STARD5', 'MTOR', 'WBP4', 'ANKS6', 'HYI', 'LOC100128573', 'ZBTB25', 'SIRPG', 'MESTIT1', 'SUPT5H', 'YLPM1', 'NKAPP1', 'TUBE1', 'CCHCR1', 'ANKRD10', 'PAX9', 'HMMR', 'RHOBTB1', 'CLK1', 'LOC284023', 'LINC00597', 'PIGY', 'ARHGAP33', 'EIF4A1', 'KRT80', 'OR4F6', 'HIRIP3', 'DIRAS2', 'MTTP', 'LIPT1', 'ABCC1', 'THOC6', 'TAMM41', 'CDC42SE1', 'RAB1A', 'HOXB7', 'OIP5', 'DGAT2', 'LY6G5C', 'LILRA5', 'PI4KB', 'MMRN1', 'PCDHA13', 'ATF3', 'DYRK2', 'DLEC1', 'PSG11', 'AGAP2', 'RAB3C', 'C8ORF22', 'FNDC5', 'HIST1H3I', 'HPCA', 'OR14J1', 'SNORD4A', 'LSR', 'SDHAF1', 'ZNF177', 'CAPS2', 'SNORD90', 'SPTSSA', 'RSBN1L', 'STOML1', 'CANT1', 'FOS', 'OR8J3', 'PCDH18', 'PAXIP1.AS2', 'OLFM1', 'DOK6', 'CYTH4', 'CTRB2', 'ADGRF1', 'CCDC96', 'LIMD2', 'GNAI2', 'COMMD2', 'NUDT8', 'OR5A1', 'OR6C4', 'OSGIN1', 'PTGR1', 'HOMER2', 'MAGEB10', 'HTR2C', 'HIP1R', 'ANGPTL1', 'TMEM89', 'HCG9', 'GOSR2', 'SLC13A1', 'ZNF804B', 'OSBPL8', 'ERO1LB', 'SLC17A9', 'DPYSL3', 'OR5K4', 'ARID4A', 'PRADC1', 'ADGRD1', 'MS4A10', 'WBP1', 'GDF15', 'GSG1L', 'NUTM2F', 'THEG', 'CROT', 'ANP32A', 'C11ORF86', 'FAM168B', 'BHLHE22', 'VHL', 'NSUN2', 'SNX17', 'RAB33B', 'SLC10A5', 'ELF1', 'ZNF324B', 'TMEM207', 'POLR3A', 'BIN2', 'TFR2', 'VSIG10', 'CAPN6', 'PCDH1', 'UBE2D1', 'OR4K15', 'INSR', 'ASGR2', 'UCN3', 'OR2Y1', 'SNAPC5', 'METTL5', 'TCHP', 'CCDC88A', 'DHODH', 'FAM83F', 'CPD', 'NAA11', 'CXORF65', 'TXLNGY', 'AKNAD1', 'PQLC3', 'FAM183CP', 'ATXN8OS', 'LINC00593', 'GABRA4', 'NPHS1', 'RBBP6', 'KRT40', 'POMC', 'GAR1', 'CEP41', 'GALNT18', 'ORC3', 'CNOT8', 'GBP3', 'SBNO2', 'PMCHL1', 'KRTAP13.4', 'BSG', 'SRP72', 'HCG4B', 'AGO3', 'ZNF44', 'SUN5', 'ADCY8', 'RAB22A', 'NDC1', 'COLEC11', 'SELENBP1', 'SMAD5.AS1', 'ADPRHL1', 'CCNB1', 'KIF22', 'DNASE1L1', 'SNX32', 'THBS2', 'MSN', 'PPFIA3', 'IER5L', 'HNRNPL', 'RARS', 'CFAP126', 'PTP4A3', 'ZNF653', 'CTPS2', 'C21ORF91', 'KRTAP19.1', 'SUMF1', 'SSPO', 'RNY5', 'PPM1G', 'ISY1', 'BCKDHA', 'MDC1', 'SLC11A1', 'DOK7', 'OR5T3', 'RIT2', 'RNF125', 'ARHGEF39', 'C9ORF40', 'LINC00470', 'KRT1', 'CACNG2', 'EN2', 'NPEPPS', 'PALM2.AKAP2', 'TOM1L2', 'MOXD1', 'SNORD114.4', 'CACTIN', 'PACRG', 'TCTE1', 'CYFIP1', 'SPESP1', 'SLC25A42', 'MYL10', 'SH3RF1', 'CLDN25', 'PRR7', 'RBM11', 'TCEAL6', 'LAIR1', 'GAB1', 'VN1R2', 'MAP6', 'SOX30', 'RAB5B', 'SNORD116.24', 'ACADL', 'CHI3L1', 'DBF4B', 'TEN1', 'BMP15', 'BIN1', 'SNORD80', 'LINC00202.1', 'PRPF18', 'KLF7', 'MAPK10', 'VEPH1', 'SNAR.G2', 'VTI1A', 'NTAN1', 'ADRA2B', 'ZNF492', 'WDR35', 'PLAUR', 'ARHGEF5', 'RAET1G', 'PCGF1', 'ATAT1', 'ZNF879', 'PSKH1', 'SNORD38A', 'AP3M1', 'MLXIP', 'INSRR', 'GRM3', 'MGAT4A', 'KHDC1L', 'BDP1', 'LOC646762', 'LRGUK', 'ESRP2', 'GPX6', 'LGALS3BP', 'MKKS', 'APOF', 'GOLT1A', 'KCTD2', 'CEP57', 'TRIM42', 'SLC25A51P1', 'ADAMTS10', 'FAM171A2', 'OR4K1', 'IGFBP6', 'EID2B', 'MBNL1.AS1', 'ATP6V0C', 'PNPLA6', 'LIMK1', 'FBXL15', 'NAGK', 'EPC2', 'RNASE6', 'WDR11', 'EFS', 'DLL1', 'OR2T33', 'PTPRVP', 'BCL7C', 'MYO15A', 'UBFD1', 'CPA1', 'NRP2', 'BPHL', 'C12ORF76', 'C10ORF67', 'PLEKHG1', 'CATSPERB', 'LRFN4', 'IMP3', 'CBLN1', 'P2RY11', 'PRPF38A', 'PRAMEF10', 'RNF4', 'ADAM23', 'TRA2A', 'GREB1', 'DEAF1', 'BNC2', 'BCLAF1', 'ARHGEF40', 'ZBTB40', 'PPBPP1', 'SYNPO2', 'G2E3', 'GPM6A', 'NUPR1L', 'CHD3', 'ERC2.IT1', 'SCARB2', 'ANKEF1', 'RELL2', 'RWDD4', 'FBLN2', 'IKZF3', 'DOCK7', 'HHLA3', 'TRPM7', 'ZNF660', 'CD52', 'TCEAL4', 'TOPORS', 'FZD8', 'PREX2', 'RIMKLA', 'SERTAD1', 'UGT2A3', 'NRXN2', 'SSR3', 'SNHG12', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 0.8065724481290373 Spearman Correlation: 0.7577960336986739 Coefficient of Determination: 0.6505409590338298 RMSE: 0.14122233712057353 NRMSE: 0.08489878510573008 MAPE: 217.57696812687314 Pearson Correlation: -0.15594505937734807 Spearman Correlation: -0.017686165672660258 Coefficient of Determination: -2.4177692759862097e+21 RMSE: 11552551749.030056 NRMSE: 8227844388.517788 MAPE: 84194373447904.39 Predictor: ElasticNet Pearson Correlation: 0.4308703431360797 Spearman Correlation: 0.4232159439508848 Coefficient of Determination: 0.1270165040521839 RMSE: 0.22320723659499705 NRMSE: 0.13418573577027876 MAPE: 377.1696839435771 Pearson Correlation: 0.319748342484195 Spearman Correlation: 0.36981757877280264 Coefficient of Determination: 0.08686761804484944 RMSE: 0.22451086724628153 NRMSE: 0.1598989140549552 MAPE: 1329.1841119238115 Predictor: RandomForests Pearson Correlation: 0.44998455825834627 Spearman Correlation: 0.3953737645798852 Coefficient of Determination: 0.11560677602423464 RMSE: 0.22466113949378858 NRMSE: 0.13505978014800146 MAPE: 393.4510216192622 Pearson Correlation: 0.26801602806714236 Spearman Correlation: 0.37010535557506585 Coefficient of Determination: 0.05299831989477943 RMSE: 0.2286366615503009 NRMSE: 0.1628373465545417 MAPE: 1265.4816832119504 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['PABPC4L', 'OSR1', 'LRRC2', 'SUSD5', 'UBE2V2', 'SMAD1', 'STK32C', 'CYP19A1', 'MYO18B', 'C10ORF25', 'KCNE5', 'DMXL2', 'MS4A3', 'FAM27C', 'CD200', 'C2ORF49', 'ASGR1', 'CCT3', 'ATMIN', 'RECK', 'TRA2A', 'FAM43B', 'CDC42BPA', 'FUOM', 'TNFRSF17', 'CDH15', 'SPTLC1', 'C9ORF40', 'SYNE1', 'ENG', 'RPS25', 'NQO2', 'SYNM', 'OR10A4', 'SNRNP70', 'THRSP', 'FAM186A', 'CDK15', 'TMEM170B', 'SLFN14', 'EPB41L4A.AS2', 'ALOX5AP', 'IFNGR1', 'CCNB1IP1', 'PIEZO2', 'GSTZ1', 'GDNF', 'SRP9', 'ZNF484', 'JMY', 'RNF115', 'AKAP6', 'RHOU', 'ARMC7', 'LPAR6', 'ANGPTL5', 'ACAN', 'AGAP2.AS1', 'PAXIP1', 'NKAIN2', 'MICALCL', 'FLT3LG', 'MCEMP1', 'BPIFB3', 'AKAP3', 'LIPA', 'EPB41L2', 'EPHB3', 'NCOR1', 'SPA17', 'TAF2', 'ZC3H12D', 'ZNF10', 'ATP6V1C2', 'ERC2', 'SPIN2B', 'RASGEF1A', 'GRIK1.AS1', 'DENND1B', 'PPCDC', 'VPS28', 'TCEB3B', 'MAGEB18', 'ACBD5', 'SNORD115.38', 'TXNDC11', 'NDNF', 'DYNLT3', 'SLC39A2', 'ZNF529', 'SNHG5', 'ZC3H12A', 'SLC26A4.AS1', 'ZEB1', 'LBX1', 'P4HA1', 'ATXN10', 'SGSM2', 'HERPUD2', 'ADORA2B', 'MOS', 'KIAA1429', 'DDX53', 'WSB2', 'LDHA', 'ZNF429', 'OTOA', 'VPS26B', 'GGACT', 'CCDC64', 'DPCD', 'NPS', 'OR6C2', 'LPA', 'TOX2', 'VDAC2', 'FAM27B', 'PPIP5K2', 'CNOT7', 'LGALS3BP', 'CLCA4', 'TTYH3', 'CMA1', 'KLHL12', 'TP53I11', 'TAS2R39', 'BSND', 'TOM1', 'PON2', 'KLRC1', 'DKFZP434A062', 'MSX2P1', 'MFI2', 'TEX26', 'NUP153', 'ZNF273', 'TMEM119', 'ZSCAN4', 'C10ORF128', 'CCL15.CCL14', 'MALAT1', 'MAGI2', 'SLC22A18', 'UTF1', 'GKN2', 'TNFRSF11B', 'TTLL9', 'SNORD114.10', 'LINC00608', 'PEPD', 'CLRN1.AS1', 'CD8B', 'C20ORF24', 'MGAT4C', 'LOC727896', 'LINC00661', 'GTF2A1L', 'PCDHA2', 'BID', 'AOC2', 'ACY1', 'GUCA1C', 'GLI2', 'CDC6', 'C10ORF95', 'ACTA2', 'DCLRE1C', 'MAPK8IP1', 'FGF20', 'ABI2', 'CCDC113', 'HSPA5', 'VPS4A', 'CLEC10A', 'FAM200A', 'SNORD15A', 'ANP32C', 'RXFP4', 'NOVA2', 'SLC7A10', 'HOXA9', 'OR4C16', 'SLITRK5', 'ZSWIM5', 'SNORD116.10', 'LEUTX', 'CDKL4', 'PTPN2', 'LIX1', 'LEFTY1', 'UIMC1', 'ZFAND3', 'RCCD1', 'RPL41', 'TK2', 'ATP6V1D', 'MFSD4', 'ALG10', 'MYCN', 'NDUFV1', 'NFYC.AS1', 'FAM155A', 'PIP5K1A', 'CNTF', 'CFLAR', 'LINC00493', 'ZNF561', 'OR5M1', 'ERN1', 'C14ORF39', 'CADM4', 'ID2', 'LYN', 'EPHX2', 'ATP11C', 'BRPF1', 'USP7', 'PRR15', 'AIF1L', 'APRT', 'ADAM12', 'SLC46A1', 'EHD4', 'GBP7', 'IL13RA1', 'TRIM32', 'ADAMTSL2', 'TMPRSS4', 'ORM1', 'MPPE1', 'CALHM3', 'NID2', 'GPX6', 'UBALD2', 'MYO1F', 'PSMB5', 'CCR7', 'PRMT5', 'GPRASP2', 'COX4I1', 'TPTE2P6', 'OR13C2', 'LRGUK', 'TM9SF2', 'ZCCHC10', 'TNFAIP8L2', 'DDC', 'RAD51D', 'ST8SIA6', 'MAOB', 'GTF2IP1', 'USP18', 'TMEM69', 'CALCA', 'NBEAL1', 'GLA', 'COMP', 'AGAP2', 'HRSP12', 'RBM42', 'PYDC1', 'INCA1', 'CARD11', 'MXD4', 'TARP', 'FUBP1', 'RXFP2', 'NLRP8', 'HIATL2', 'SNAP23', 'FAM225A', 'SMPD3', 'BMP15', 'CENPU', 'TMEM106C', 'CHKA', 'MBTPS2', 'RPIA', 'KANSL2', 'CT83', 'UBE2F', 'BUD13', 'GIPC1', 'SNORD114.27', 'TP53I3', 'PMCHL1', 'TCHHL1', 'IZUMO2', 'TFF1', 'MYLIP', 'MORN2', 'NDUFS5', 'IMMT', 'KAT7', 'RAB11FIP1', 'SLC25A12', 'FAM49A', 'CPSF1', 'GRB2', 'CCDC130', 'TSPAN12', 'GPATCH4', 'C14ORF119', 'KPNA7', 'TTL', 'PLEK', 'PHYHIP', 'ABCB5', 'PACRGL', 'KRT78', 'CST6', 'TSPAN18', 'FLJ36777', 'C9ORF114', 'SORT1', 'DZIP1', 'C4ORF3', 'CCDC167', 'SIX6', 'GVINP1', 'FUT8', 'ABHD16A', 'POSTN', 'PEX11G', 'PDHB', 'CHRNA10', 'ZNF778', 'DNASE2', 'KLK3', 'ACTR3B', 'SCAF4', 'SNORD90', 'OR10A7', 'WDR90', 'SNORD50A', 'AES', 'SNORD65', 'TMTC3', 'DNAJB13', 'GNLY', 'HNRNPA3', 'OR8I2', 'PADI3', 'HSPBAP1', 'TRIOBP', 'KHSRP', 'NAALADL1', 'HNRNPD', 'IL18RAP', 'TIMP2', 'NBEAP1', 'DIMT1', 'ATPIF1', 'KIAA0753', 'TAS2R46', 'OR5B17', 'CCT7', 'TPRG1', 'PARD3', 'CALM2', 'REXO2', 'OR6P1', 'MDM2', 'LINC00160', 'PADI6', 'PCDH8', 'IQCF5', 'ADAM18', 'LPCAT3', 'RABL2B', 'B9D2', 'ATG12', 'RTP1', 'C3ORF33', 'WWOX', 'TPM3P9', 'SYS1', 'NCMAP', 'KIAA1919', 'OR6C76', 'KCNG3', 'CPSF4', 'LOC340017', 'TYMSOS', 'LIN28A', 'OR6M1', 'PIK3C2B', 'GNAQ', 'UBE2I', 'MFSD2B', 'CARD9', 'HMSD', 'CAP2', 'DUSP5', 'ARID5A', 'LINC00052', 'OR6V1', 'PCSK1', 'IL16', 'PAX7', 'RAB3C', 'PRY2', 'LINC00598', 'HSDL1', 'RPL24', 'MRPS12', 'COPS6', 'L3MBTL3', 'FGF7', 'CHCHD6', 'ZNF613', 'TUBA3FP', 'R3HDM4', 'ATP5O', 'ADAMTS7', 'MIR7.3HG', 'SPDYE3', 'PTPN5', 'PARG', 'RQCD1', 'PRMT7', 'CAPN5', 'ZDHHC8P1', 'TXNDC5', 'MIAT', 'PLCB2', 'SLC5A1', 'TMEM123', 'ZNF461', 'WDR18', 'SYNJ1', 'ARL5A', 'GLMN', 'ARGFXP2', 'FMR1', 'TP53INP1', 'NET1', 'PDPK1', 'KHDRBS1', 'ICA1', 'SNAR.H', 'ADAM5', 'MTHFD1L', 'FSTL1', 'BTK', 'OR51I2', 'HES5', 'MEPE', 'SDR16C6P', 'PDGFD', 'ETS1', 'NDRG3', 'RHBDD1', 'SNORD116.13', 'TERF2', 'ODF4', 'PIK3C2G', 'PCGEM1', 'CYB561', 'MRGPRX4', 'DGKA', 'GPATCH2', 'PRG2', 'THBS3', 'DEFA6', 'GFER', 'KRTAP12.4', 'IL4I1', 'PAXIP1.AS2', 'LURAP1L', 'ATP2A1', 'LINC00634', 'CYP27B1', 'PCDH1', 'S1PR4', 'ZNF800', 'PHLDB1', 'LMO2', 'PRAMEF6', 'CCKBR', 'SNORA41', 'MRAP', 'GABRA2', 'MAPT.AS1', 'CSF3', 'CXCL2', 'CFL1P1', 'UGT1A9', 'FAM181B', 'SESN3', 'CIPC', 'UBE2E3', 'SPTAN1', 'ZNF676', 'FBLIM1', 'FAM170B', 'KIAA0586', 'PDE4DIP', 'PRR30', 'C3AR1', 'ZBTB9', 'CFAP57', 'CRIP3', 'LIMCH1', 'KIAA0195', 'CPLX3', 'METTL13', 'GPR65', 'THEG', 'AKR1C8P', 'ACOT9', 'RGPD6', 'SCAF8', 'SFXN2', 'DPP4', 'C12ORF43', 'KPRP', 'IFFO1', 'DNAH3', 'PCID2', 'CAB39L', 'HPN.AS1', 'LYZ', 'CITED4', 'LAMA5', 'MYO6', 'PMEPA1', 'TUBA1A', 'TRIM40', 'BCCIP', 'MED13', 'OMP', 'MEIG1', 'ZNF133', 'SGK494', 'FAM99A', 'CPEB1', 'SCGB1C1', 'GNMT', 'NEUROD4', 'OR10C1', 'PPP1CB', 'CTRB2', 'CLDN5', 'SLC30A9', 'GCN1L1', 'ZNF347', 'PTPRH', 'FAT2', 'EPB41L3', 'WDR72', 'EAF1', 'TNF', 'DCUN1D2', 'TEAD1', 'POLA2', 'MZT2B', 'SLC1A4', 'LSS', 'SNORA61', 'FAM95B1', 'HGS', 'PHGDH', 'KIAA1456', 'ANXA7', 'TRIM60', 'ROBO1', 'KIAA0895', 'PRR20D', 'NAT8L', 'CYFIP1', 'ACER1', 'TAAR2', 'IRX1', 'PSG8', 'TMCO1', 'OR2J2', 'PGM1', 'ABCA4', 'LCE3A', 'FAM92A1', 'RNF7', 'SLC4A11', 'CA7', 'SNORD11', 'P2RX7', 'HIST1H2AL', 'LEPROT', 'SMYD2', 'TAS2R8', 'BICD2', 'ZNF644', 'KRTAP13.4', 'SIN3A', 'BCL2', 'SHC1', 'MAN2B2', 'PUS7', 'TPD52L2', 'ANKRD53', 'CLEC4C', 'CNIH3', 'ROBO4', 'BTBD7', 'GALNT5', 'EFHD1', 'SPAG16', 'NPR2', 'STX4', 'RPN1', 'ZNF295.AS1', 'PCDH11Y', 'USO1', 'SLC22A16', 'RPL35', 'SIRPB2', 'SLC17A8', 'SNORA68', 'CABP5', 'ANXA13', 'DNAJB14', 'PLEKHG4', 'CHRM4', 'ADAMDEC1', 'TAF11', 'OR13C4', 'COL9A3', 'FXYD3', 'CLTA', 'GNGT1', 'RASSF9', 'ASTE1', 'RYK', 'HES1', 'ZXDB', 'OR1A1', 'ZCCHC8', 'TLR2', 'RPL13AP20', 'KRTAP13.2', 'C3ORF22', 'SNORD27', 'CXADR', 'AFG3L2', 'ZNF236', 'C15ORF57', 'RBM41', 'STRADB', 'LINGO3', 'NUB1', 'ZNF350', 'CIB4', 'METTL23', 'CASC8', 'NPY2R', 'ETFB', 'RARA', 'BRCA2', 'SGSH', 'SLC38A5', 'COX10', 'RAB17', 'BEND3P3', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 0.8249599550854979 Spearman Correlation: 0.7073012051525932 Coefficient of Determination: 0.680558124358232 RMSE: 0.5760080165962831 NRMSE: 0.09813244571209484 MAPE: 812.7017657364947 Pearson Correlation: -0.11742612545782107 Spearman Correlation: 0.4097844112769486 Coefficient of Determination: -114086953951.29453 RMSE: 306368.8910350055 NRMSE: 56808.62062581226 MAPE: 2533545.347577721 Predictor: ElasticNet Pearson Correlation: 0.6761049488379925 Spearman Correlation: 0.5933519534998252 Coefficient of Determination: 0.4331465803215805 RMSE: 0.7673049318600814 NRMSE: 0.1307230236400636 MAPE: 1238.0353724596337 Pearson Correlation: 0.499306913835582 Spearman Correlation: 0.5858501609599065 Coefficient of Determination: 0.24401378675511787 RMSE: 0.7886487327899975 NRMSE: 0.14623562632857362 MAPE: 340.1154132267874 Predictor: RandomForests Pearson Correlation: 0.6134064524859059 Spearman Correlation: 0.5291943730016947 Coefficient of Determination: 0.21577958226844152 RMSE: 0.9025092812207341 NRMSE: 0.15375730978086344 MAPE: 779.8842279997331 Pearson Correlation: 0.4037618792179982 Spearman Correlation: 0.44657892715247227 Coefficient of Determination: 0.10849669085199065 RMSE: 0.8564226642555826 NRMSE: 0.15880264495746016 MAPE: 375.19365357474305 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['UROD', 'PLP1', 'NWD1', 'TMC5', 'MDP1', 'AMELX', 'NSMCE1', 'HIST1H2BD', 'RCVRN', 'KRTAP4.4', 'F13A1', 'G0S2', 'LRRTM4', 'IZUMO1', 'GUCY1A2', 'C1ORF174', 'CHN2', 'SLC2A7', 'MDH1', 'RLTPR', 'GPATCH2L', 'SUSD2', 'CCDC130', 'IL12RB1', 'SUGCT', 'KLHL26', 'LEAP2', 'INTS12', 'PCBD1', 'MAPKAPK3', 'PCDHB15', 'SYCE3', 'ROBO2', 'PAX1', 'FAM83G', 'TRAPPC10', 'BPIFA1', 'YIPF1', 'AEBP2', 'CTPS2', 'NT5DC3', 'CENPBD1P1', 'BTG2', 'TP53I13', 'PCED1B', 'NIF3L1', 'GBA2', 'CFAP20', 'PLA2G16', 'FOXI1', 'DVL3', 'OR52L1', 'LOC100133331', 'SNRNP48', 'PLAC8L1', 'SLC46A3', 'DDRGK1', 'CHML', 'ALG8', 'C7ORF57', 'FAM178B', 'GLRX3', 'CDK1', 'RAD1', 'ATG12', 'KRTAP9.4', 'ATXN10', 'ZNF781', 'ZCCHC24', 'LINC00636', 'ANKRD20A3', 'RAB8A', 'GOPC', 'FASTKD2', 'BRD7P3', 'PPFIA2', 'STOML1', 'PEBP1', 'MED6', 'ARHGEF26', 'RWDD3', 'DEPDC4', 'ERP44', 'SLC22A15', 'LCE1F', 'VHL', 'DHX32', 'TTLL9', 'AGBL4', 'KLHDC7B', 'RPL28', 'PRKAA2', 'KRTAP6.3', 'HNRNPDL', 'FILIP1', 'ZFP82', 'FMO2', 'CMSS1', 'PLA2G6', 'MTFR1', 'SEC24A', 'RNASE10', 'RBBP8', 'AP3M2', 'IRX2', 'FKRP', 'LOC221122', 'FAHD2A', 'MAST4', 'ANAPC2', 'RRP7BP', 'COX7C', 'HS6ST3', 'WIBG', 'CPNE6', 'CA13', 'ZC3H3', 'B4GALNT3', 'BOK', 'ELAC1', 'CELSR3', 'CD8B', 'CACNB3', 'GOLGA8B', 'CT45A6', 'LINC00667', 'AUTS2', 'CDH12', 'TMEM87B', 'BIRC8', 'KCNAB3', 'NR2E3', 'ACOX3', 'USP14', 'NARF', 'RFX6', 'SLFN12', 'TRMT2B', 'ZNHIT3', 'ZNF665', 'SYF2', 'PANK4', 'TMEM147', 'TMEM145', 'ICAM2', 'HRK', 'TMEM2', 'C16ORF78', 'FRG2C', 'BEST1', 'EIF2S3', 'CD27', 'CDKN2A.AS1', 'RAB11FIP4', 'C11ORF87', 'POLR1C', 'RC3H2', 'SYCN', 'TMEM207', 'TUBB4A', 'VSIG2', 'TSC2', 'IL16', 'CHTF18', 'PKNOX1', 'CEACAM22P', 'TLR9', 'ATP6V1E2', 'RALB', 'SLC30A9', 'CDIPT', 'DHRS9', 'GPHB5', 'AFF4', 'SMARCD3', 'FGF3', 'ARHGEF35', 'SGMS1', 'SNX16', 'ATP6V0D1', 'LRRC75A.AS1', 'DHRS7', 'HPCAL4', 'FAM217B', 'ALDH1A3', 'MYO5A', 'MYL3', 'BCORP1', 'RGL3', 'VILL', 'EIF4B', 'FAM185A', 'TMEM126A', 'MOGAT3', 'ZNF843', 'EEF1E1', 'KCNAB2', 'ARL13B', 'KLK5', 'SERPINA9', 'MPLKIP', 'RBX1', 'ULK4', 'RGL2', 'SPIRE2', 'SOD3', 'SNORA45A', 'B3GNTL1', 'SLC4A5', 'SEC16B', 'ECHS1', 'WDR45B', 'SNX1', 'CEP162', 'RXRB', 'PCDHB12', 'BRCC3', 'DMRTC1B', 'PRRT1', 'ZNF157', 'EEFSEC', 'GBP4', 'EEF1A2', 'FBXO3', 'PCNX', 'DUSP6', 'TFRC', 'WFDC6', 'ING1', 'FAM188B', 'LOC728392', 'MSMB', 'EYA3', 'ZMYND10', 'SGK1', 'LHX2', 'TBC1D23', 'VNN2', 'USP6NL', 'SLCO4C1', 'EPB41L1', 'C10ORF71', 'DEFA6', 'TLX2', 'FLJ16779', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.49581055418978665 Spearman Correlation: 0.43740088189020365 Coefficient of Determination: 0.029731007081209238 RMSE: 0.45226130834394934 NRMSE: 0.1220523464888258 MAPE: 203.30225728605308 Pearson Correlation: 0.0053660095102270235 Spearman Correlation: 0.10290129936407956 Coefficient of Determination: -1.5473687610100424e+25 RMSE: 1831194172892.6265 NRMSE: 734781945337.6294 MAPE: 890349497506385.5 Predictor: ElasticNet Pearson Correlation: 0.39072475601818163 Spearman Correlation: 0.39428069940924004 Coefficient of Determination: 0.1360347811382565 RMSE: 0.4267676465930862 NRMSE: 0.11517233889171581 MAPE: 197.39757899807373 Pearson Correlation: 0.19494936275823677 Spearman Correlation: 0.24954973740289285 Coefficient of Determination: 0.024637750816882464 RMSE: 0.4597486434662881 NRMSE: 0.184477980332839 MAPE: 259.20401114096643 Predictor: RandomForests Pearson Correlation: 0.43915994712814777 Spearman Correlation: 0.4155332541846914 Coefficient of Determination: 0.137067572983537 RMSE: 0.4265124893615446 NRMSE: 0.1151034792783492 MAPE: 212.28685580843356 Pearson Correlation: 0.17032858678045054 Spearman Correlation: 0.3048717435954027 Coefficient of Determination: 0.02273690205895429 RMSE: 0.4601964192894303 NRMSE: 0.18465765411908958 MAPE: 257.4349258656884 Fold: 2 Protein: RB1 x_train_column_count: 371 x_train columns: ['FAM189A1', 'IPO7', 'DLL3', 'ABRACL', 'HIRIP3', 'CAGE1', 'GDAP1', 'UTRN', 'EFCAB10', 'TMEM223', 'SSMEM1', 'CCM2', 'GLT8D1', 'PLEKHG7', 'PATE3', 'MAPT.IT1', 'IGF2.AS', 'ZBED4', 'DDX3X', 'DENND2C', 'BTBD2', 'SEC11A', 'GMDS', 'OR8K3', 'ZNF541', 'CCDC102A', 'SPR', 'EPOR', 'ZNF30', 'NANS', 'FLJ30679', 'ACE2', 'TNFAIP8L3', 'MYLPF', 'COL15A1', 'MIAT', 'MLEC', 'UBR3', 'EMC2', 'TMEM196', 'MAP4K2', 'YIF1A', 'IKBKG', 'PTPN20', 'PCP4', 'DOCK9', 'ANTXR2', 'C11ORF68', 'GCNT3', 'PFKFB1', 'FHL3', 'TRA2B', 'SGSM1', 'PRIMA1', 'EDF1', 'SLC4A2', 'GCK', 'POLR3B', 'ZBTB11.AS1', 'ETNPPL', 'LY6E', 'CELP', 'GAK', 'HOMEZ', 'PARVB', 'UGT3A1', 'TUBD1', 'HIPK1', 'CDHR5', 'FGR', 'YJEFN3', 'OR2W1', 'IGFBP3', 'MGARP', 'BRWD1', 'DIS3L2', 'CAMTA1', 'PPIL3', 'C19ORF66', 'IGFBPL1', 'BDNF', 'LINC00917', 'TSPAN14', 'QKI', 'TPBG', 'GP5', 'PITPNA', 'ACVR1C', 'GDF2', 'FAM83C', 'KIAA0101', 'TCL6', 'GLT1D1', 'CLK1', 'KIR2DL1', 'DEFB113', 'GAA', 'CCSAP', 'NABP2', 'ANKRD34B', 'RINT1', 'LCE1A', 'TOE1', 'CD72', 'KIFC3', 'RELL1', 'CPB1', 'LOH12CR2', 'FAM26D', 'GLUD2', 'SMAD2', 'BTG1', 'PSG4', 'BEND2', 'MTHFD2', 'TNPO1', 'EHF', 'ZNF234', 'TRRAP', 'MCAM', 'POLE2', 'GABRA3', 'JADE2', 'EME2', 'MS4A1', 'KLF4', 'SENP2', 'INF2', 'LDAH', 'ZNF468', 'DDX17', 'CNR2', 'GPR155', 'PLIN4', 'CCDC14', 'NLRP1', 'MKS1', 'PPP3CC', 'HAAO', 'RRP8', 'TMEM204', 'SH2D1B', 'CDH7', 'PPIL1', 'ZNF284', 'PDGFRL', 'MPP6', 'TNKS', 'MYL1', 'NR2C2', 'EPHA4', 'TPMT', 'DUSP16', 'NOL11', 'SPRY2', 'SLC22A8', 'PALLD', 'CFAP70', 'SNAPC3', 'KLHDC1', 'EIF2A', 'GTDC1', 'TRIM36', 'CNIH1', 'DCD', 'NDUFAF2', 'C17ORF74', 'PIF1', 'G6PC', 'DUX4L2', 'TMEM87B', 'C3P1', 'GALNT12', 'GPR37', 'SH2B3', 'CCDC186', 'P3H1', 'NDUFS4', 'NPC1L1', 'RAI2', 'SPRR2A', 'SERINC4', 'NFYB', 'RBM38', 'RAB11B', 'EMX2OS', 'TROVE2', 'TAF5', 'OR11A1', 'CPXCR1', 'C12ORF4', 'CXORF40A', 'ANKRD20A9P', 'BRCA1', 'C1QTNF9', 'FGF23', 'TTC4', 'CSPP1', 'STX1A', 'ZFAS1', 'OR2G2', 'SPAG17', 'EIF2S1', 'KRTCAP3', 'C3ORF79', 'FUZ', 'AP3D1', 'CNBP', 'POM121L12', 'SLCO1C1', 'SGIP1', 'LINC01001', 'PNPO', 'GPR26', 'COMTD1', 'GFM1', 'OR5I1', 'LINC01550', 'CSTF1', 'ZNHIT2', 'ARHGEF16', 'RAB27A', 'CTNNA2', 'MRPL54', 'MS4A13', 'PQBP1', 'ISOC2', 'FGF14', 'HPN.AS1', 'CDK15', 'ARHGAP39', 'TUSC3', 'CFAP97', 'EGR3', 'C3ORF62', 'DNAL1', 'ABCG5', 'NFIC', 'MNDA', 'SDHAP2', 'ZNF510', 'PARP9', 'IL36A', 'MRPS10', 'ZNF764', 'ARHGAP9', 'ZNF586', 'STON1.GTF2A1L', 'SH2D6', 'FLNA', 'DDX4', 'YWHAE', 'MRPL3', 'ARHGAP29', 'SLC6A11', 'MARVELD2', 'ATOH8', 'VEGFA', 'C6ORF120', 'MBIP', 'PREX2', 'PGS1', 'MYO3B', 'PRKCA', 'PRR35', 'PWAR4', 'HSP90B3P', 'KCNS2', 'RBP5', 'STK32B', 'LOC100130987', 'PTENP1', 'SNX14', 'PVRL4', 'FAM86C2P', 'INPP5F', 'USP22', 'CEACAM22P', 'HDDC3', 'STON2', 'DHRS2', 'ERCC6L', 'RHOXF1', 'TADA2A', 'INE2', 'HDAC3', 'NOS3', 'BCL6B', 'GKN2', 'CHRM3', 'MOB3A', 'CCDC53', 'TNXB', 'MAPKAP1', 'TUBGCP2', 'PGBD1', 'TAS2R5', 'ZRANB2', 'ARHGEF38', 'METRNL', 'KIF18A', 'PCGF5', 'SPTY2D1', 'PCGF6', 'BTBD17', 'SPNS2', 'CPEB1', 'COL6A1', 'ZNF180', 'PON1', 'LINC01106', 'TMIE', 'SLC25A52', 'MYOCD', 'DHRS3', 'NAPB', 'ADNP', 'GGT6', 'ANP32AP1', 'GOLGA7', 'NDUFC1', 'B3GALT2', 'L3MBTL3', 'GLIS2', 'RBMY1A3P', 'KCTD13', 'PCDHGB7', 'DOCK10', 'OR13C3', 'WDR92', 'TRANK1', 'SFTA1P', 'SNORD88A', 'CSF3R', 'LARGE', 'MTG2', 'OBSL1', 'ENAM', 'KIF1A', 'KLRC1', 'FAM50A', 'COL9A3', 'KIAA2013', 'MOB1A', 'GPR65', 'ITGA4', 'OR9A4', 'RAB11FIP1', 'WDR38', 'CNGA3', 'CDH11', 'CPN2', 'ESF1', 'ATP4A', 'ANKRD26P1', 'MACF1', 'GLDC', 'RAB11FIP5', 'TAAR9', 'GBP3', 'ASIC2', 'GAST', 'OR51T1', 'NEU3', 'GTPBP10', 'TREML3P', 'KCTD17', 'MPHOSPH10', 'APOBEC3F', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.4659719384736245 Spearman Correlation: 0.41010981245047595 Coefficient of Determination: 0.10126246665686256 RMSE: 0.222823155706048 NRMSE: 0.08148886618857812 MAPE: 675.0533962665302 Pearson Correlation: 0.06047499607242017 Spearman Correlation: 0.09171501556107527 Coefficient of Determination: -2.1896830591662036e+23 RMSE: 114600516120.10051 NRMSE: 65657845171.99328 MAPE: 21288893095780.863 Predictor: ElasticNet Pearson Correlation: 0.29995306718923076 Spearman Correlation: 0.2820567805462042 Coefficient of Determination: 0.06185878729030836 RMSE: 0.22765541689390234 NRMSE: 0.08325607697992332 MAPE: 188.33979105081585 Pearson Correlation: 0.14448206517665468 Spearman Correlation: 0.16086986741533205 Coefficient of Determination: 0.0005862410012480446 RMSE: 0.24483224022276193 NRMSE: 0.14027124716272413 MAPE: 280.593246185105 Predictor: RandomForests Pearson Correlation: 0.4255751813895309 Spearman Correlation: 0.342166121364239 Coefficient of Determination: 0.10467262011144807 RMSE: 0.2224000158584388 NRMSE: 0.08133411931628101 MAPE: 175.82936581961403 Pearson Correlation: 0.1484716230872721 Spearman Correlation: 0.18286597827735954 Coefficient of Determination: 0.003326506537526197 RMSE: 0.24449636038327247 NRMSE: 0.14007881219607457 MAPE: 339.43443974623915 Protein: CDH1 x_train_column_count: 836 x_train columns: ['CHID1', 'ZFHX4.AS1', 'AMBN', 'NUDT5', 'CETN2', 'PBX4', 'PM20D1', 'CCDC71', 'BSG', 'SLC17A8', 'TNFRSF10B', 'PPIE', 'HNRNPH3', 'NMRAL1', 'ARL4D', 'WIBG', 'PGBD5', 'DUSP5', 'TATDN1', 'SNX8', 'SF1', 'SORD', 'SIRPB1', 'KDM5B', 'MRPS16', 'NKX2.4', 'GPR18', 'FBXO15', 'CYHR1', 'SUPT16H', 'TBC1D29', 'ZNF23', 'JUN', 'HSPA9', 'AQP4.AS1', 'TMEM169', 'TSPAN8', 'RPS27', 'HS3ST6', 'RMDN1', 'ABCF1', 'USH1G', 'SFT2D1', 'ZNF202', 'SEPHS1P1', 'TBX15', 'TMEM176A', 'STARD8', 'ELSPBP1', 'RTP4', 'SLC39A5', 'GCLC', 'CAPN15', 'LRRC28', 'SEMA5B', 'SAMSN1', 'CDH4', 'FAM197Y2', 'CPO', 'PI4KAP2', 'PLEKHO2', 'PUM2', 'SCG5', 'OR9G4', 'CORO6', 'MED30', 'C1ORF185', 'LINC01106', 'CXCR3', 'MAN2B1', 'FAM168A', 'SYNJ2', 'LINC01559', 'RAC2', 'FAM47A', 'RABEP2', 'LOXHD1', 'CAMSAP2', 'CDK2AP2', 'TRIM58', 'BNIP1', 'IQSEC1', 'CKMT1B', 'CATSPER1', 'SLC10A7', 'RHOBTB3', 'SOGA3', 'SNCG', 'ERI2', 'KRTAP12.3', 'IMPDH2', 'OR2D2', 'LPCAT1', 'MEP1A', 'FAM134B', 'ZNF227', 'ZDHHC23', 'ELF5', 'NLRP5', 'ATF5', 'OR13C3', 'MAN2A2', 'ARMCX2', 'YWHAE', 'ACER1', 'FRMPD4', 'PCDHGB2', 'DIO1', 'PEAR1', 'MALSU1', 'ANGEL2', 'LAMP1', 'METTL17', 'CLDN10', 'NCF4', 'YTHDC1', 'MYOF', 'CHRNA3', 'RBM17', 'TARDBP', 'CNIH2', 'IBA57', 'MPST', 'MRPL42P5', 'NAALAD2', 'SNORD114.22', 'UFL1', 'TTLL6', 'RPLP1', 'GRIN2D', 'TBC1D10A', 'PROS1', 'ITPKC', 'LINC00326', 'TYMP', 'NKAIN4', 'GALT', 'ADAMTS18', 'CNBD2', 'DNAI1', 'MMS22L', 'FAM118B', 'ATP1A2', 'ZNF25', 'RASA1', 'C9ORF64', 'STX12', 'C10ORF55', 'SLC26A3', 'B3GNT9', 'KLHL5', 'KLF13', 'COMMD4', 'PRSS23', 'GRK4', 'CNPPD1', 'TBL3', 'HGC6.3', 'LDLRAD2', 'MTCP1', 'RGS13', 'TEDDM1', 'MYO1F', 'F2R', 'WNT10A', 'C5ORF46', 'DSC2', 'P3H3', 'CGN', 'MYT1', 'PTP4A2', 'MOCOS', 'SSX2', 'MAP3K14', 'DOCK9', 'MIR143HG', 'SLC15A4', 'C2CD3', 'NXPE3', 'E2F1', 'C20ORF24', 'PCDHGA11', 'OR8G2', 'C2CD2', 'CRYBB2', 'AMBP', 'PER4', 'CCDC9', 'WIPI1', 'ANK2', 'NOS2', 'ZNF831', 'VMAC', 'LOC154449', 'MMP16', 'HSPA1L', 'SLC38A3', 'ANKRD20A4', 'C5ORF47', 'SRBD1', 'CAPN1', 'FAM210A', 'GULP1', 'HLA.DRA', 'PLA2G2D', 'DEFB118', 'VHL', 'SMU1', 'OR10G9', 'ACOT6', 'FAM138D', 'KLK10', 'EXT2', 'AP2B1', 'ABCD1', 'MRPS34', 'YBX1', 'N4BP2L2.IT2', 'PRRT1', 'SNORD115.1', 'SLC6A17', 'HSD17B10', 'PMCHL1', 'TNIP2', 'C1QBP', 'HYALP1', 'PRB1', 'GOT1', 'TMEM181', 'WDR63', 'PPBPP1', 'FAM195A', 'SNAI3.AS1', 'MZF1', 'SNORD70', 'CAPS2', 'CARD8', 'ZNF557', 'SIDT2', 'ENDOG', 'SMO', 'MOSPD2', 'MAPKAPK5', 'CEP135', 'ZBTB40', 'ARID3B', 'EIF5', 'HMOX2', 'SYTL1', 'ABCB11', 'BOD1L1', 'PRKCB', 'SNORA14B', 'ULK4P3', 'SEC16B', 'SLITRK1', 'KRT222', 'SPAG17', 'HENMT1', 'PLEKHA4', 'LINC01098', 'MCF2L2', 'TCEAL4', 'SON', 'SCMH1', 'TMEM211', 'GZF1', 'GALR3', 'TERT', 'S100A16', 'CBWD1', 'ATF6', 'EOMES', 'RASSF8', 'MTMR11', 'PKP4', 'FHL1', 'FAM20B', 'KLHDC8A', 'AADACL4', 'ITGA8', 'GNGT1', 'ZBTB8OS', 'MSTO2P', 'MBP', 'CMTM8', 'SRRD', 'STYX', 'CRYGB', 'AGTPBP1', 'YWHAB', 'COX16', 'APMAP', 'CHKB.CPT1B', 'VPS72', 'PPP1R14B', 'METTL7B', 'ZNF823', 'TTC27', 'SNORA9', 'TM7SF3', 'RWDD2A', 'BTBD1', 'TMEM38A', 'AMOTL1', 'PTF1A', 'LRTOMT', 'CREB3L1', 'TXK', 'HMG20B', 'AGER', 'SLED1', 'ARHGEF11', 'VPS26B', 'TEAD4', 'WARS', 'KIAA0922', 'CXORF21', 'HERC5', 'TEX12', 'CCDC81', 'LMNTD2', 'CENPL', 'RAB3IL1', 'TAF1L', 'TAS2R10', 'ARPP21', 'CEP44', 'MFSD11', 'DDX21', 'ITIH5', 'DCAF7', 'WNT2B', 'TTLL7', 'SEMA7A', 'ZNF773', 'ARL16', 'FCF1', 'LINC00298', 'FARP1', 'TNFAIP8L3', 'RNF41', 'DLEU7', 'MYBPC2', 'CACNA1C', 'CDKL4', 'CAPZB', 'STX10', 'TPRN', 'LINC00597', 'LMOD2', 'POU4F3', 'MRPL17', 'ADAMTS6', 'UBE2Q1', 'BMP8B', 'FCGR3A', 'OBP2A', 'NNMT', 'TMEM132C', 'TREML1', 'SMOX', 'NEK4', 'ZNF706', 'ASPRV1', 'VTRNA1.3', 'EHF', 'CHD1', 'CRCP', 'SAMD1', 'SLC6A19', 'C19ORF52', 'SLC48A1', 'PCSK1N', 'PSMD12', 'P2RX4', 'AIF1L', 'ZNF493', 'OR3A2', 'NEDD4', 'SPZ1', 'GRIA3', 'AS3MT', 'MS4A15', 'FAM114A2', 'MVB12A', 'ZNF567', 'FKBP7', 'RAB26', 'CTDSP2', 'ACOT4', 'TDRD3', 'GATAD1', 'TRIM16L', 'ARHGAP10', 'KRT76', 'LINC00304', 'SNORD45A', 'ZNF839', 'BHMT', 'AGPAT1', 'ANKFN1', 'ZNF252P', 'EGLN1', 'EVX2', 'GNAL', 'CCDC108', 'SV2B', 'WFDC9', 'SGSH', 'PRRG2', 'HACE1', 'FBXW8', 'C19ORF80', 'ODF3', 'KRT72', 'IL20RA', 'FUBP3', 'TMEM189.UBE2V1', 'ASAP1', 'KCNQ5', 'HIST1H1T', 'ASB17', 'H1FNT', 'MAP3K1', 'FAM19A1', 'SNHG3', 'PGAM1', 'AGMAT', 'APOL5', 'TUBB4A', 'DYNLT1', 'CCM2', 'FRRS1L', 'UTP3', 'ITGB1BP2', 'GRTP1', 'AFMID', 'FYTTD1', 'NCALD', 'PLAGL2', 'BHLHA15', 'CTSG', 'CHRNB3', 'EMC4', 'CISH', 'STXBP2', 'FZD2', 'STK19', 'MCM2', 'NAT2', 'KIAA1429', 'SPATA6L', 'CNIH3', 'RSPH3', 'SNORD116.13', 'TRIM61', 'NGRN', 'NDP', 'FAM110D', 'TENM1', 'CXCL8', 'USP51', 'ZNF559', 'SIAH3', 'DOC2A', 'ERCC2', 'KRBA1', 'CHRD', 'ZDHHC8P1', 'NDUFAF2', 'TMEM260', 'ALS2', 'RMI2', 'CDH6', 'OXCT2', 'SERPINA4', 'LPAR3', 'MKRN1', 'TMPRSS9', 'TRPC3', 'TWF2', 'PKP1', 'HCG4B', 'CUL9', 'ATG9B', 'ARHGDIG', 'ATP5G2', 'SPIB', 'ASCC2', 'IGFBP2', 'YWHAQ', 'FAM167A.AS1', 'ARHGEF33', 'ARID5A', 'CELF5', 'MYCBP2', 'MYLPF', 'DHRS4', 'HEPACAM2', 'HIST1H2BK', 'SNORD65', 'CLP1', 'ADGRE4P', 'AOC2', 'UBL5', 'PSME3', 'ICOSLG', 'KIF4A', 'SOX1', 'DIDO1', 'RAPSN', 'USH1C', 'SLC4A4', 'DNAJC14', 'ABL1', 'WDFY3.AS2', 'SLC45A3', 'NUP188', 'HOXD10', 'CORIN', 'KLRB1', 'OR14C36', 'AKR1B15', 'SMPD1', 'UBR7', 'TDGF1P3', 'SLC26A2', 'FAM3A', 'FAM105A', 'LRRC8A', 'ARHGAP11A', 'SLC6A9', 'SFRP1', 'RBSN', 'OMA1', 'VEGFB', 'TCTA', 'KRT9', 'ZNF271P', 'XPO4', 'LMOD1', 'ZP2', 'FBXL3', 'THOC6', 'ARHGEF15', 'OGFRL1', 'RGS22', 'FAF2', 'OLFML3', 'AK4', 'HCN4', 'SNRNP25', 'KCNMB3', 'LINC00301', 'WEE2.AS1', 'GPM6B', 'HFM1', 'CRP', 'ARHGEF2', 'IGF1', 'FAM150A', 'OTOA', 'WDR4', 'STUB1', 'MRPL3', 'NCK1', 'SERINC4', 'OCEL1', 'IFNW1', 'CEP68', 'OR5R1', 'FDCSP', 'NMNAT2', 'PNPLA5', 'SLC2A3', 'DAPK2', 'GFI1', 'HIST1H2BM', 'IFT80', 'BCORP1', 'OR6C4', 'GNL3', 'CRAMP1L', 'MAGEA10', 'ARPP19', 'KLHL10', 'PRAM1', 'PPP1R3D', 'LILRA6', 'FRG1B', 'HAUS7', 'ALPL', 'SRP14', 'CCDC66', 'FGF17', 'C2ORF47', 'NME1', 'GPR149', 'KCNU1', 'GPX7', 'CPTP', 'LGALS1', 'PCDHGC4', 'KIF6', 'KIF22', 'HMHA1', 'C6ORF201', 'DNAJC3', 'RGAG1', 'MGC16275', 'COMMD8', 'LINC00238', 'PMS2', 'SPATA7', 'CACNA1H', 'CLNS1A', 'KRTAP9.8', 'KCND2', 'NECAB2', 'RFX7', 'TRPC6', 'GDI1', 'TCF21', 'SLC46A1', 'FAM182B', 'ATP6AP1L', 'KCNJ4', 'ZNF738', 'PHYHD1', 'PIGU', 'DRAXIN', 'SNRPE', 'ECEL1', 'LINC00475', 'PPIP5K2', 'MIF', 'ANKMY2', 'TSTD1', 'DLEU1', 'SPATC1L', 'ZFAND5', 'SF3B5', 'KHK', 'RNF181', 'ALG9', 'NEXN', 'DPP8', 'MEMO1', 'ASXL2', 'CHRNA1', 'GAS2L2', 'PGLYRP3', 'TBRG1', 'CDH8', 'TMEM41B', 'SAMD8', 'RGR', 'KLRC4', 'LINC00923', 'FAM76A', 'SF3A2', 'ROBO1', 'ASMT', 'OR6N2', 'TMEM185B', 'GPR88', 'ISOC1', 'ZFAND2B', 'MAP3K2', 'DPY19L2P2', 'IL21', 'TNFAIP2', 'ST13P4', 'OR7C2', 'MPI', 'FBLIM1', 'MCF2', 'PDCD10', 'ERCC6L', 'SIGLEC16', 'IL17RC', 'OR8G5', 'TRIM37', 'TEX40', 'KDELC2', 'THAP9', 'FAM50B', 'MSH2', 'CX3CL1', 'MYL6B', 'CD27.AS1', 'TRMT10C', 'CYTH1', 'STMN4', 'ASIC4', 'OR5W2', 'GIPC2', 'SUSD5', 'SHROOM2', 'SPANXN4', 'KIAA1549L', 'DNM2', 'TTTY22', 'ZNRD1.AS1', 'SNORD91A', 'GUCA2B', 'INO80C', 'TIGD7', 'STON1', 'FTHL17', 'IRAK1BP1', 'SARS2', 'PIDD1', 'SCNN1D', 'LCN1', 'DIRAS3', 'OR8S1', 'FANCG', 'GTSE1.AS1', 'NFATC1', 'DCX', 'SMARCD2', 'MUC5B', 'RIPK4', 'TMCO3', 'SLX1B', 'SLC35B3', 'EPN2', 'TPX2', 'EAF1', 'ERGIC1', 'NLRC4', 'LRRC29', 'C12ORF49', 'WDR13', 'DEPDC5', 'HEPHL1', 'CDC42SE1', 'KLHL6', 'UBP1', 'DUSP9', 'RPS6KA1', 'OLAH', 'IL1B', 'EVI2A', 'SKAP1', 'C8ORF44', 'ATF3', 'CELA2A', 'LOC642929', 'CYP2U1', 'CCDC25', 'TPP1', 'RAVER2', 'AP3S2', 'CLPSL2', 'FAM69B', 'SPSB2', 'CAMKK1', 'FAM89A', 'NXF4', 'SNORD115.8', 'ZNF322', 'STYXL1', 'CST1', 'C17ORF104', 'SSX1', 'METTL22', 'SYCE1', 'ZIC3', 'UAP1', 'LOC100190986', 'KRTAP5.11', 'PLOD3', 'ZNF641', 'MTHFS', 'ADAMTSL2', 'PYGO1', 'ING1', 'LOC100133050', 'ATP1B1', 'ZCCHC13', 'PDHX', 'ZNF207', 'WDR7', 'TRANK1', 'KIAA1147', 'BORA', 'LRP2BP', 'SNORD121A', 'ZNF112', 'GNB3', 'KRTAP23.1', 'ANKHD1', 'MPV17L2', 'ACTRT2', 'JPH2', 'DDX1', 'KRTAP10.4', 'GPR176', 'CES5A', 'GOLGA8A', 'CD46', 'ABHD6', 'TBX2', 'TTPAL', 'MRTO4', 'GPR3', 'ITPR1', 'C1S', 'MBOAT7', 'TMEM161B', 'PER3', 'LRIT3', 'C5ORF58', 'NF1', 'PLCZ1', 'POLA1', 'C9ORF173', 'LRRC43', 'DEFB132', 'OPLAH', 'SUPT20HL1', 'NME1.NME2', 'CDV3', 'GALNT14', 'DKFZP434H168', 'ZNF503', 'RSG1', 'NUDT1', 'SNAI2', 'ZBED8', 'IL27RA', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.8289554776670746 Spearman Correlation: 0.7550990706792627 Coefficient of Determination: 0.45827812822508174 RMSE: 0.8247793320174837 NRMSE: 0.1323140020883105 MAPE: 552.0083318973731 Pearson Correlation: 0.0067966416960634195 Spearman Correlation: 0.4258421604626219 Coefficient of Determination: -1.7451650201307425e+24 RMSE: 1520022929933.3079 NRMSE: 269938364399.45087 MAPE: 54831143283136.34 Predictor: ElasticNet Pearson Correlation: 0.7243583851523233 Spearman Correlation: 0.6845873847724679 Coefficient of Determination: 0.4893918559145083 RMSE: 0.8007435572453299 NRMSE: 0.12845809853939677 MAPE: 506.53528686903496 Pearson Correlation: 0.6054418132480911 Spearman Correlation: 0.5614086430592138 Coefficient of Determination: 0.3166983606428282 RMSE: 0.9511261474422976 NRMSE: 0.1689089233603796 MAPE: 247.4910280376028 Predictor: RandomForests Pearson Correlation: 0.6236302762928378 Spearman Correlation: 0.5177593665475317 Coefficient of Determination: 0.3862027777974296 RMSE: 0.877934354277272 NRMSE: 0.1408413177632585 MAPE: 181.16314081924165 Pearson Correlation: 0.5731179061594709 Spearman Correlation: 0.6054126954994485 Coefficient of Determination: 0.2874206032590081 RMSE: 0.9712891117796973 NRMSE: 0.1724896309322851 MAPE: 180.43121545408755 Protein: CDH2 x_train_column_count: 474 x_train columns: ['PSMG1', 'SMR3B', 'LY6K', 'CEBPB', 'CHST8', 'NANS', 'NDUFB6', 'TMEM159', 'CLTCL1', 'GLT6D1', 'VCP', 'SLC9A3R2', 'FBXL3', 'CDH12', 'USB1', 'PSMD5', 'PHF20L1', 'IFIT1B', 'KRBA1', 'OGN', 'PROM1', 'ASPM', 'SCMH1', 'DEFB105A', 'NCF1', 'C10ORF10', 'CDKL4', 'VLDLR', 'RAB40A', 'TM6SF2', 'ZNF567', 'SKP1', 'ZNF839', 'ADD2', 'SNORD57', 'C9ORF163', 'RASA1', 'PTBP2', 'ANAPC15', 'TMEM145', 'RAB22A', 'KIF20B', 'KIF3C', 'GDF6', 'DNHD1', 'RNY5', 'SNX5', 'ZNF366', 'DCAF5', 'GLMN', 'GSTK1', 'DFNA5', 'GIMAP7', 'SEBOX', 'NPPC', 'SLC22A10', 'SQSTM1', 'PRDM14', 'C9ORF142', 'JAG1', 'FLG2', 'SLC34A3', 'CYMP', 'R3HDM1', 'FAM98C', 'SLC12A6', 'SEC1P', 'UBXN4', 'HYLS1', 'CYP1B1.AS1', 'CD177', 'DNAI1', 'TMEM140', 'DEFB115', 'ARL10', 'MED28', 'TIGD7', 'LURAP1L', 'C10ORF88', 'SCARNA12', 'SNAPIN', 'CST4', 'CPEB3', 'OLIG1', 'SNORD58C', 'HIST2H4A', 'ORC6', 'PROSER2', 'UBE2A', 'GUCY1B3', 'PGAP2', 'TEDDM1', 'FOXO1', 'GNMT', 'SNORA26', 'ARL13B', 'C2CD2', 'GTF2H4', 'SLC38A8', 'CLSTN3', 'PTPRU', 'GCKR', 'GDF10', 'E2F4', 'SLC7A6OS', 'NAP1L6', 'AKAP3', 'GFPT1', 'ZCCHC24', 'SNORD78', 'RBFA', 'TAF13', 'TMEM97', 'ADPRHL2', 'FTH1P3', 'OLR1', 'NAPSA', 'AP4S1', 'ALDH1A2', 'SMUG1', 'MRPL40', 'CFH', 'NUDT7', 'MRPS36', 'FAM81A', 'TM4SF1', 'SCAMP4', 'KIAA0125', 'KLK5', 'MT1M', 'FAM66C', 'MT1B', 'MEFV', 'CTHRC1', 'PHYHD1', 'LYPD3', 'AK2', 'NLN', 'MBTPS2', 'LYPD6B', 'SMAP1', 'UGT1A8', 'DUSP5P1', 'DPH3', 'MRPS15', 'ZNF98', 'C6ORF10', 'ATP13A5', 'CDC42BPG', 'BICC1', 'TMPRSS12', 'SASS6', 'TOR1B', 'PAQR8', 'KANK4', 'FOXQ1', 'POLE', 'LRRC14B', 'CEP170B', 'HIST1H2AA', 'PCDH15', 'LCE3A', 'OR4A16', 'HLA.DQA1', 'EIF4E', 'GPR20', 'CTAGE9', 'PRRT3', 'TUBB', 'KRCC1', 'TBC1D2', 'TRIM42', 'AGPAT4', 'CA4', 'EXOSC5', 'NOS1AP', 'JRK', 'DDIT3', 'HSPBAP1', 'MYOC', 'RBCK1', 'EGLN2', 'FBXL15', 'DEPTOR', 'CHP2', 'IL6ST', 'CDC42SE1', 'CDRT4', 'GLIPR1L1', 'MAP3K15', 'KRT39', 'SOCS5', 'MMADHC', 'PAAF1', 'PLCG2', 'SLC6A18', 'OR6C65', 'SBK2', 'SLC22A5', 'ADRA2C', 'VDAC3', 'SNORD116.1', 'SMIM15', 'CXCL8', 'KIT', 'ZFYVE9', 'LOC493754', 'MIF4GD', 'SFT2D3', 'MYOM3', 'GPR101', 'NAT8', 'OR8K5', 'ADAM15', 'PPP5C', 'GPR119', 'ACAD9', 'NPHS2', 'STAT1', 'LOC646214', 'TUBGCP2', 'OR2T6', 'RASGRF2', 'RTCA', 'TGIF2', 'FABP4', 'PCSK1N', 'ATP5J', 'OR2B3', 'VSIG1', 'LOC90246', 'FIBIN', 'CACTIN', 'CCT6P1', 'ZCWPW1', 'NUBPL', 'MEP1A', 'SMAGP', 'CDC16', 'RELT', 'ASAP1.IT1', 'CCDC28B', 'FAM184B', 'YBEY', 'SNORA78', 'TBC1D3P2', 'COLQ', 'ABCC2', 'ACTR3C', 'CYR61', 'GUSBP1', 'INPP4A', 'CERS4', 'MRE11A', 'LHX9', 'NPAS2', 'ASMTL.AS1', 'PIN1P1', 'COPRS', 'ZRANB3', 'KCNT2', 'SEMG2', 'DUSP27', 'FIGNL2', 'SBSN', 'DDX43', 'PSMG2', 'OR1A2', 'PATE3', 'CDC25B', 'NOLC1', 'HERPUD1', 'SNORD115.48', 'PPP1R3G', 'DVL2', 'VPS37A', 'ATP12A', 'DSTN', 'OGFRL1', 'ZCCHC3', 'CEACAM19', 'CSN1S1', 'GALNT1', 'SPSB4', 'OR6B3', 'SYCE2', 'CAPRIN2', 'PRIMPOL', 'GLYCTK', 'TBX4', 'ARSG', 'THUMPD1', 'NT5DC3', 'N4BP2L1', 'TAF10', 'NADSYN1', 'LZTR1', 'OSGIN1', 'STAM', 'WFDC11', 'GTF3C5', 'HIGD2A', 'SNORD51', 'COL6A6', 'ATG101', 'RPL31P11', 'SLC11A1', 'CYP4Z2P', 'KRI1', 'ABCB9', 'INADL', 'SH2B1', 'HEATR6', 'TMEFF2', 'FAM224B', 'PTGER1', 'ZNF826P', 'WDR54', 'SHH', 'COL18A1', 'SLC9A3R1', 'ACPT', 'GLTSCR2', 'ZNF814', 'GALK1', 'CRYM', 'KRTAP4.8', 'DKFZP434A062', 'MCTP2', 'APBA1', 'GOLGA6L9', 'VGLL4', 'RPS6KA4', 'MTG1', 'TMEM161B', 'RXFP1', 'SLC7A2', 'EIF4A2', 'VWA8', 'DCD', 'WWP2', 'LMTK3', 'IL20RB', 'DMRTC2', 'ANO8', 'NPY5R', 'HOXD10', 'EOGT', 'RAB3IL1', 'GOLM1', 'PRKX', 'NCAPH', 'TMEM45B', 'MSH2', 'PCDHGB2', 'NUP107', 'ATP1B3', 'IFNAR1', 'KCNMB2', 'AARS', 'THNSL2', 'SMYD3', 'HNRNPA2B1', 'ABCC10', 'PPP1R14D', 'PAPSS2', 'ANP32B', 'CENPU', 'KRTAP27.1', 'WDR60', 'GATS', 'DNAJC21', 'ARSA', 'SLC2A2', 'CA2', 'ARL8A', 'TIE1', 'FITM1', 'SNORA81', 'PSMD1', 'UBE2W', 'PIGQ', 'METTL10', 'CALCR', 'DAND5', 'DIP2A', 'AIMP2', 'CDH3', 'ATG5', 'NPDC1', 'ZGPAT', 'LILRA1', 'DMRTC1B', 'RSBN1L', 'UBL4A', 'RAD51AP1', 'TAB2', 'IL11', 'ZNF354A', 'IL9R', 'COL15A1', 'HIST1H4C', 'FANK1', 'OTOS', 'ETF1', 'ARL15', 'RPL22', 'CYP2B7P', 'CNOT7', 'CELSR2', 'SLC36A4', 'CLEC12A', 'NUTM2F', 'STXBP2', 'TUBA3C', 'OR5AC2', 'C7ORF49', 'PIK3IP1', 'CPLX1', 'HOXA6', 'CDIPT', 'SMCHD1', 'HCG18', 'TPPP3', 'TFIP11', 'SNORD111', 'GHDC', 'SUMF2', 'VAMP3', 'C5ORF38', 'CORT', 'SSFA2', 'GAGE1', 'ACSM4', 'MAPK4', 'CNPPD1', 'AP1B1', 'PMPCB', 'SNX4', 'TUBA1B', 'ABHD14A', 'LRIT2', 'SNORA21', 'GATA1', 'PLCH2', 'JUP', 'PDRG1', 'PDCD1LG2', 'HIST1H2BK', 'DHX34', 'FBXO22', 'RFXANK', 'RHEBL1', 'SKIDA1', 'CDHR5', 'PHYHIP', 'NUMA1', 'C10ORF95', 'NPTX1', 'DUS3L', 'BDP1', 'PCDHGA3', 'ZNF334', 'FOXD1', 'AATK.AS1', 'TCP10L2', 'CRYBA1', 'PLD1', 'PAH', 'OR13C4', 'MS4A7', 'RCCD1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.5772251181944806 Spearman Correlation: 0.5198427190262941 Coefficient of Determination: 0.33011441280238407 RMSE: 0.3012757056820839 NRMSE: 0.10916577494096816 MAPE: 4066.3565014989076 Pearson Correlation: 0.07692082071061218 Spearman Correlation: 0.2729942487412926 Coefficient of Determination: -2.594385249415815e+23 RMSE: 197159809109.41205 NRMSE: 103868362216.98375 MAPE: 10104986950209.273 Predictor: ElasticNet Pearson Correlation: 0.33812394274012636 Spearman Correlation: 0.306971171030498 Coefficient of Determination: 0.09124844930883458 RMSE: 0.3509024317631124 NRMSE: 0.12714777583995668 MAPE: 800.9078904375175 Pearson Correlation: 0.30854358621253847 Spearman Correlation: 0.37015413130426306 Coefficient of Determination: 0.07806422136083513 RMSE: 0.3716648505422189 NRMSE: 0.19580166715426908 MAPE: 163.01178958193591 Predictor: RandomForests Pearson Correlation: 0.43877897882821165 Spearman Correlation: 0.3408142180217822 Coefficient of Determination: 0.11467886300058139 RMSE: 0.34634921845331185 NRMSE: 0.1254979413194115 MAPE: 936.5076376491592 Pearson Correlation: 0.26248496261339294 Spearman Correlation: 0.36219393229928787 Coefficient of Determination: 0.04713836524269455 RMSE: 0.37784708525423993 NRMSE: 0.1990586118494339 MAPE: 177.87534727608093 Protein: CDH3 x_train_column_count: 75 x_train columns: ['ADIG', 'KIAA2018', 'TCAF1', 'ORAOV1', 'TEX2', 'P2RY8', 'ACKR1', 'EFHC2', 'TNXB', 'ITPR3', 'RNF17', 'VPS52', 'NEUROG2', 'FAM186A', 'DNAJB14', 'C12ORF10', 'WTAP', 'CLRN1.AS1', 'ABCA10', 'AP4M1', 'SMC2', 'PFDN2', 'NFIA', 'KCNE1', 'RNF168', 'HSFY2', 'SIVA1', 'ACBD6', 'TMEM19', 'SNORD77', 'MEIS1', 'RNF214', 'GPR1', 'PCDH10', 'GMCL1P1', 'PALB2', 'INE1', 'TMEM135', 'MYT1', 'YDJC', 'NKX1.2', 'SNORD114.8', 'TPGS2', 'SLC39A8', 'SLC5A4', 'DIMT1', 'ATAT1', 'RTN4RL1', 'SPRR1B', 'NINJ2', 'ARMT1', 'S1PR5', 'KARS', 'NGLY1', 'PERP', 'ECEL1', 'SH2B3', 'GPR6', 'CDC14B', 'SNORD30', 'WNT9A', 'TM6SF2', 'SGCE', 'LTF', 'ZNF69', 'NID2', 'CEBPA', 'MTRF1L', 'KRTAP10.6', 'FZD8', 'NBPF6', 'HNRNPR', 'FANCI', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.41995114687344975 Spearman Correlation: 0.4261037574588858 Coefficient of Determination: 0.17635896576032584 RMSE: 0.1885035386108906 NRMSE: 0.1418674513338982 MAPE: 374.84499996884904 Pearson Correlation: 0.3071431651089681 Spearman Correlation: 0.3231578536661876 Coefficient of Determination: -0.08885350542089321 RMSE: 0.20653366741515136 NRMSE: 0.16994459591471356 MAPE: 1489.4425797244908 Predictor: ElasticNet Pearson Correlation: 0.3405456313234504 Spearman Correlation: 0.35445415141837444 Coefficient of Determination: 0.09696649333279617 RMSE: 0.19737968524018784 NRMSE: 0.14854762460408646 MAPE: 199.24741487041888 Pearson Correlation: 0.20356186410063842 Spearman Correlation: 0.20004537686643306 Coefficient of Determination: -0.10115695608347042 RMSE: 0.20769724858097358 NRMSE: 0.1709020394807649 MAPE: 877.8429285194026 Predictor: RandomForests Pearson Correlation: 0.3773326930523753 Spearman Correlation: 0.3842977985595683 Coefficient of Determination: 0.11974871591321656 RMSE: 0.19487397919745642 NRMSE: 0.1466618343812937 MAPE: 229.48841385692975 Pearson Correlation: 0.23792931923802668 Spearman Correlation: 0.21974060648580815 Coefficient of Determination: -0.09136808607856484 RMSE: 0.20677201264080483 NRMSE: 0.17014071639990525 MAPE: 1102.29614116975 Protein: PTEN x_train_column_count: 886 x_train columns: ['CYP27C1', 'ZP3', 'HBS1L', 'VLDLR', 'HOXA13', 'CD38', 'GSTA3', 'SPSB1', 'ERMAP', 'TMEM116', 'CTAGE10P', 'FAM161A', 'GPX3', 'SNAP23', 'ZNF177', 'LRRC74A', 'NUP153', 'PIFO', 'METTL21A', 'HIST1H2BM', 'SAP30BP', 'TELO2', 'VASH2', 'ZMAT3', 'LMBR1', 'SRPK2', 'ZNF831', 'ZNF770', 'EEF1B2', 'ZNF320', 'C20ORF141', 'RNU6ATAC', 'ZMYM2', 'SLC7A10', 'WNT5B', 'SNTA1', 'LOC401463', 'GRAMD1B', 'IGLL1', 'PPP1R10', 'KCNMB1', 'BLNK', 'SART3', 'LINC00628', 'IFT122', 'IFNGR1', 'FAM27L', 'EMILIN2', 'CNTNAP5', 'CACNG4', 'PLEKHB2', 'C1ORF53', 'TRNT1', 'SLC22A12', 'VPS33A', 'R3HDM2', 'AIFM1', 'GUCY1A3', 'CPNE8', 'DUX4L6', 'GAS7', 'CNNM2', 'PWWP2A', 'RHOT2', 'SERPINB3', 'C9ORF16', 'AKNA', 'PCSK2', 'COL6A3', 'FOXQ1', 'CDH11', 'LAMB2', 'TMEM91', 'POMK', 'ANKRD13A', 'CYSTM1', 'CCDC25', 'ANAPC10', 'LINC00518', 'GBGT1', 'TCP10L', 'RASA3', 'PLCZ1', 'SPEG', 'POLB', 'RNF115', 'ATAD3C', 'FAM173A', 'C12ORF74', 'BMS1P6', 'ARF3', 'TARM1', 'ACTL8', 'CFL2', 'ZRSR2', 'RBFOX2', 'BRI3', 'HMGB3P1', 'PNPLA1', 'DLGAP2', 'FRAT2', 'CARD11', 'TCF3', 'FAM189B', 'SPON1', 'CACNG5', 'RFX3', 'VCX3B', 'LINC00893', 'ZNF700', 'OR4K14', 'UBE2D4', 'TEKT5', 'HIST1H3F', 'PRKCD', 'ZNF311', 'RNF5', 'OR5H15', 'DDX3X', 'E2F3', 'MTL5', 'BTN3A2', 'CRIPT', 'RPL7A', 'SYT4', 'TLE6', 'GLT1D1', 'SLC30A8', 'SUSD2', 'FUT5', 'IHH', 'TENM4', 'OR1M1', 'C20ORF202', 'TMEM50B', 'LCE1B', 'BTBD6', 'SPX', 'PTRHD1', 'SUGCT', 'TJP3', 'ZNRD1.AS1', 'XKRY', 'HGSNAT', 'ARL17A', 'ANAPC7', 'ALDH16A1', 'DIP2A', 'PROSER2', 'C19ORF54', 'TAAR1', 'BRWD1', 'BCL2L1', 'CTSS', 'ARF5', 'TRIM33', 'ACTR2', 'GULP1', 'SLC22A24', 'PTPRA', 'PTCHD3', 'FBF1', 'KIAA0930', 'TMPRSS4', 'NOMO2', 'HES5', 'CLDN16', 'C19ORF66', 'DSCR9', 'RNF4', 'RNF144B', 'CEP162', 'TACSTD2', 'FAHD1', 'PIWIL2', 'ITPR2', 'SYT1', 'SNORD56B', 'DEC1', 'C21ORF91', 'DHX35', 'SNORA15', 'ZNF512', 'CDON', 'DDX24', 'SUPT20H', 'HACD2', 'AATBC', 'EVA1B', 'SLC25A53', 'PLCXD3', 'NRSN2', 'SWSAP1', 'NHLH2', 'EXOSC7', 'DUSP9', 'ABCA9', 'RASA4CP', 'RNF130', 'ZNF90', 'RPP21', 'OR8U1', 'FAR2', 'DTX1', 'GK', 'TK2', 'LINC01548', 'DHRS7', 'AKAP8L', 'SH2D5', 'TIMM13', 'CCDC24', 'CABIN1', 'SV2B', 'AFP', 'MAP1A', 'TTC37', 'AMT', 'FAM53A', 'TRDN', 'CEP44', 'OR2W3', 'TERT', 'MTMR14', 'RMDN3', 'TNNT3', 'MPC1', 'DPP7', 'OLIG1', 'MRPL46', 'ZNHIT6', 'PPP1R27', 'LOC646471', 'DSC1', 'C2ORF73', 'NEGR1', 'B3GNT2', 'CENPA', 'RCCD1', 'CCKAR', 'CXORF66', 'NFYB', 'HPYR1', 'SUFU', 'RDH13', 'CMAHP', 'KRTAP11.1', 'DSCR8', 'KLK6', 'CXORF40A', 'TMEM14C', 'COX19', 'EP400', 'GNG5', 'C2ORF44', 'SPACA6P', 'OTOR', 'SCN2B', 'LIN9', 'MSX2', 'SPATA33', 'SMCR5', 'PIEZO1', 'SGOL2', 'TIMM10B', 'MBLAC2', 'NKX2.5', 'STATH', 'HTR1D', 'INTU', 'BCAR3', 'GINS1', 'TTC23L', 'TSGA10', 'IL13RA1', 'RANBP3', 'OGDH', 'USH2A', 'NFIB', 'GSTK1', 'POLE2', 'ROPN1L', 'ADAMTS2', 'ADIPOR1', 'MPDZ', 'TMEM17', 'SLC25A48', 'METTL2B', 'RPL19', 'LCE1E', 'USP17L2', 'MYCL', 'SNAR.I', 'CAPNS1', 'SNORA74A', 'PAXIP1.AS2', 'TMEM79', 'CMC2', 'KCTD2', 'MYADM', 'UBE2Z', 'DUSP3', 'RPS6KA6', 'FAM102A', 'DNAJB6', 'UGDH', 'PDILT', 'SNORD113.2', 'SIAE', 'DEFB121', 'CCDC112', 'LINC00982', 'CNOT1', 'OR10Q1', 'OR5B21', 'ZNF592', 'FOXL1', 'PCDHGB8P', 'CHP2', 'EPB41', 'PCF11', 'SNORD115.9', 'PCP4', 'SSR4', 'TNFRSF10A', 'FRG1', 'DNAH3', 'NAT8B', 'FAM183CP', 'CALHM2', 'ARID1A', 'CDH20', 'ICOS', 'TRMT13', 'ATG7', 'AP2M1', 'RFPL1S', 'BOLL', 'HOXC9', 'KCNH6', 'DNAJC22', 'PRAMEF11', 'SC5D', 'TMEM47', 'CHN1', 'DUX4L1', 'DEF8', 'HORMAD1', 'ANKRD30BL', 'SHISA3', 'PSMD3', 'ARL10', 'MAN2B2', 'TFAMP1', 'AP1S3', 'TCP10', 'NR4A2', 'LOC220729', 'HLA.DMB', 'DMTF1', 'ZNF765', 'PGAP2', 'CFH', 'BLOC1S5', 'TAAR2', 'CASD1', 'PQBP1', 'C1QB', 'C3ORF79', 'PLEKHH1', 'TMTC1', 'RLF', 'COLGALT2', 'EAF2', 'FGD4', 'ANKS4B', 'DYDC2', 'PTX4', 'RAB6A', 'ARHGAP33', 'ERH', 'ADAMTS15', 'C1ORF186', 'DTX2P1.UPK3BP1.PMS2P11', 'ADI1', 'ARMC10', 'HBZ', 'SLC16A11', 'LACTB', 'UGP2', 'SNORD116.10', 'DNA2', 'ZG16', 'ZBTB7B', 'BREA2', 'C6ORF10', 'LRRC40', 'IP6K3', 'SSX3', 'HOMER3', 'CRCT1', 'UBE2Q2P1', 'BACH1', 'LILRA4', 'FNDC5', 'IRF8', 'MRPS7', 'RPTOR', 'TNFSF4', 'PCBP2', 'ISCA1', 'FBXO41', 'TBC1D23', 'TEAD1', 'APBB2', 'SNORA11', 'SELO', 'DLG1', 'RNF148', 'JAKMIP2', 'TMEM25', 'ACOT4', 'ZNF532', 'T', 'DSCAM', 'AP2A1', 'SLC43A3', 'DYNLRB1', 'CETN1', 'CYP46A1', 'EN1', 'ZFP64', 'TSPAN3', 'LAMA1', 'ZP4', 'CCDC57', 'SLC7A8', 'TMLHE', 'CCM2', 'PCDHB7', 'PRR32', 'SNAI2', 'TTTY17A', 'AURKAIP1', 'UG0898H09', 'LRRFIP2', 'REG4', 'INTS10', 'PUS7L', 'HOXB6', 'APOL4', 'KCTD18', 'NR1I2', 'SLC26A4.AS1', 'KLRD1', 'CEP41', 'LINC00669', 'WDR63', 'LAX1', 'CCR4', 'SSTR4', 'LINC00152', 'TUBAL3', 'SERPINE1', 'STRN', 'RXFP2', 'SOWAHD', 'ADCK4', 'SLC2A9', 'EXPH5', 'OR4X2', 'CRMP1', 'BOD1L1', 'MARVELD1', 'ZSCAN23', 'ABCG2', 'MKRN3', 'PNMA5', 'HIGD2A', 'ANKRD32', 'SNORD115.45', 'MAGEB18', 'TSPAN2', 'ASB12', 'EIF3C', 'TM6SF1', 'USP48', 'MBP', 'MSR1', 'CACNA2D4', 'SMNDC1', 'DAPK2', 'SOCS2', 'PTPN11', 'ALG3', 'PABPN1', 'PAK1', 'HIST1H3E', 'PRDX3', 'C7ORF49', 'C15ORF57', 'STAU2', 'ACTL9', 'HLA.DQA1', 'TPM2', 'OR10G9', 'SLC30A7', 'SMIM7', 'MEG8', 'TRPS1', 'AGPAT2', 'IGFL1', 'MANEAL', 'HMBOX1', 'CSRNP2', 'NT5C1A', 'UGGT2', 'OCLM', 'AARS', 'SNX15', 'MT1L', 'MAU2', 'GALNT15', 'CRIP3', 'OTC', 'SLC45A4', 'CDK10', 'TARBP2', 'RASA2', 'LOC727896', 'PRPF38A', 'CENPP', 'PIK3C3', 'SLC22A25', 'TGFBRAP1', 'SEL1L2', 'PPRC1', 'NLRP5', 'DPP4', 'KIF1A', 'NUFIP1', 'DACT2', 'NDUFS2', 'DNMT3L', 'ZZZ3', 'C7ORF66', 'LINC00523', 'PPP1R11', 'TSPO', 'FKBP6', 'EEF1A1', 'RHOBTB3', 'FAM214A', 'ARHGEF2', 'STRBP', 'SPATA31D5P', 'SNORD62A', 'CMTR2', 'WSB1', 'KRTAP9.8', 'KCTD20', 'SUN1', 'TMEM59', 'THEM4', 'KCNA7', 'ZNF576', 'IRX2', 'ERCC6', 'ZP2', 'UBA6', 'A1CF', 'TRAT1', 'TP53', 'C9ORF85', 'ZNF518B', 'SLC43A2', 'BTBD8', 'MROH5', 'TSSC4', 'RNASE11', 'PYGM', 'WFDC10A', 'C7ORF61', 'ZNF92', 'PRDX6', 'F2', 'TACO1', 'OR7E156P', 'TMEM183A', 'QSOX2', 'MUC2', 'SMAD6', 'CRIP2', 'UCHL5', 'VWCE', 'RPS9', 'C9ORF153', 'ATP13A3', 'CPSF3L', 'ACTRT2', 'DCLK1', 'ADAM18', 'GALNT13', 'ZNF853', 'C15ORF61', 'PADI2', 'FGB', 'HOXB13', 'KRTAP19.6', 'TDRD5', 'TMEM18', 'IGF2', 'PDCL', 'CAV3', 'CHM', 'UNK', 'OR10X1', 'SFSWAP', 'GPR183', 'TRAM2', 'SNORD88A', 'COTL1', 'BTN2A2', 'TSHB', 'PCAT4', 'SPEF1', 'DNHD1', 'PRPF31', 'PFAS', 'MEX3D', 'XRCC6BP1', 'MAX', 'POM121', 'MAGEA6', 'NUMB', 'PTK6', 'IARS2', 'FBRSL1', 'POR', 'C6ORF48', 'ZNF687', 'MAGEB10', 'SMIM11', 'RNF113B', 'PDPK1', 'ANKDD1A', 'OOEP', 'SPACA3', 'CSN1S1', 'ATP1B1', 'GATA3', 'IDO1', 'TRAP1', 'EPHA6', 'CCBL1', 'GLS', 'PRSS55', 'EFHD2', 'GBP7', 'IFI27', 'MED11', 'FUT10', 'LRFN2', 'NDUFA10', 'OSGEP', 'QTRT1', 'MMP8', 'BACE2', 'CMTM8', 'FUNDC2', 'TRAPPC6B', 'RGN', 'NCAPD3', 'IFRD1', 'NUFIP2', 'LYN', 'BRD8', 'SHFM1', 'ARX', 'DCAF16', 'FCER1G', 'GYPB', 'OR2G3', 'LARS2', 'NUTM2F', 'DFFA', 'ITPKC', 'OR51S1', 'LUC7L3', 'MAP3K15', 'PIM1', 'TLN1', 'C1ORF123', 'DENND5B', 'XYLT2', 'SFRP5', 'CYP4Z1', 'MCTP1', 'HELT', 'GTF2E2', 'ZNF385B', 'LMF1', 'KLHL32', 'OPALIN', 'KRTCAP2', 'CELF4', 'DPM2', 'NEUROD6', 'CAMK2A', 'MUT', 'CACNB4', 'RAB3B', 'HPGDS', 'PDXDC2P', 'RPL35', 'SLC25A5', 'PCSK7', 'SNORD19B', 'GRB10', 'LPA', 'MPZL1', 'SPAG6', 'ARGFX', 'OR2Y1', 'CEMIP', 'EZH1', 'CD9', 'GAGE2B', 'NFATC2IP', 'C2ORF69', 'OR5AU1', 'PPIAL4E', 'TCAF2', 'PCYT2', 'WNK1', 'GOLGA8CP', 'SDHAF2', 'F8', 'MAGEA3', 'RABEP1', 'CT47A9', 'MSI1', 'NEURL1B', 'TRIM47', 'PRPF4B', 'DOCK3', 'ISM2', 'ZNF704', 'ZNF746', 'FKBP1A', 'RPL19P12', 'GPR107', 'OLFML2B', 'UTP18', 'ITPK1.AS1', 'SDHAP1', 'PTPN5', 'SLC7A3', 'CYP4B1', 'CECR5', 'CYP7B1', 'RRN3P1', 'IFT88', 'MIA3', 'KCNQ1OT1', 'CD3D', 'TMED10P1', 'MFSD7', 'PTGDR', 'LRIF1', 'TBC1D13', 'ICAM3', 'PIH1D2', 'ALG14', 'SNORD59B', 'LIMS3', 'IKZF2', 'TMC6', 'FABP6', 'LIG3', 'CSF3R', 'TCEB3C', 'TANK', 'LHX9', 'ANKRD50', 'TIMM17A', 'NKX6.3', 'SPRYD4', 'TXNDC15', 'LINC00471', 'MYO9A', 'CLDN20', 'LRRC71', 'SUDS3', 'SDHAF3', 'WTIP', 'TIAM1', 'B3GNT3', 'PGBD4', 'PTER', 'ARFGEF1', 'GBP6', 'CD248', 'CAB39', 'RER1', 'DEPDC7', 'GJA10', 'APOBR', 'SUZ12P1', 'GRPEL2', 'SEPT8', 'RFX7', 'TTC9C', 'WASH3P', 'SNORD46', 'CSTF1', 'OR4E2', 'DNAJB7', 'CLDN2', 'KLHDC8A', 'PPP1R9B', 'MCHR2', 'PPIL4', 'ZMAT2', 'UTP20', 'CYP21A2', 'SH3BGRL', 'OR52H1', 'GRAMD2', 'SRRM2', 'ZNF542P', 'SH3YL1', 'CTU1', 'ERBB2', 'CCNL2', 'ST3GAL3', 'MRPS35', 'RAB35', 'DMC1', 'SBDS', 'HERC3', 'RFC3', 'LRMP', 'OXTR', 'CTLA4', 'ULK2', 'PTCD1', 'KDM2B', 'COL8A1', 'CASK', 'TEX28', 'MAGED1', 'SPATA2', 'EVA1C', 'DHX38', 'GGT5', 'TMEM233', 'POTEE', 'KRTAP19.8', 'TMSB10', 'SOD3', 'NES', 'DAGLB', 'RPLP0P2', 'TTTY2', 'KLF14', 'CRLS1', 'SNX24', 'ODC1', 'C22ORF31', 'RPL9', 'WNK4', 'RNMTL1', 'FGFR2', 'TDGF1P3', 'ZNF432', 'FRY', 'LOC100129550', 'HNRNPL', 'C6ORF106', 'REL', 'OR1I1', 'ZPLD1', 'IQSEC3', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.8341952875439033 Spearman Correlation: 0.7790943497985173 Coefficient of Determination: 0.690957207836121 RMSE: 0.3467525028306826 NRMSE: 0.05421820073968925 MAPE: 314.13702277575567 Pearson Correlation: -0.1015580876352943 Spearman Correlation: 0.11292964188572918 Coefficient of Determination: -4.95510748638572e+23 RMSE: 360149388844.2855 NRMSE: 120790645574.28412 MAPE: 23108705876821.586 Predictor: ElasticNet Pearson Correlation: 0.5771049294610481 Spearman Correlation: 0.5273302239193433 Coefficient of Determination: 0.2897697929471139 RMSE: 0.5256659720451611 NRMSE: 0.08219310015560333 MAPE: 469.86757675537456 Pearson Correlation: 0.1211111235841137 Spearman Correlation: 0.15468247000292656 Coefficient of Determination: -0.09175428740551395 RMSE: 0.5345872485443333 NRMSE: 0.17929542814070742 MAPE: 1360.008046022442 Predictor: RandomForests Pearson Correlation: 0.5405392826092758 Spearman Correlation: 0.39694659949096206 Coefficient of Determination: 0.1716639085042858 RMSE: 0.5676930628267022 NRMSE: 0.08876445357309079 MAPE: 325.7000909904892 Pearson Correlation: 0.0997898221479645 Spearman Correlation: 0.21560823334308848 Coefficient of Determination: -0.013471408396161344 RMSE: 0.51506482613471 NRMSE: 0.17274779518872757 MAPE: 546.9965483066261 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['FAM71E1', 'TRAF3', 'MUC5B', 'SNORA28', 'LYRM7', 'TBATA', 'MRGPRE', 'AADACL2', 'EIF1AX', 'TTC19', 'TINAGL1', 'NFXL1', 'PABPC1L2B', 'SNORA34', 'CCDC60', 'INTS7', 'TAF1L', 'OR1A2', 'FANCA', 'DUSP2', 'SEMA3B', 'C4ORF29', 'AGO1', 'C14ORF37', 'HIST2H3D', 'CDC42EP4', 'MTHFD1L', 'ZSCAN12P1', 'CDKN3', 'CFAP126', 'CD200', 'TTC39A', 'GOLGA3', 'C2ORF40', 'DSG3', 'MAPK11', 'SUOX', 'TOB2P1', 'RPS14', 'TMEM223', 'PIK3AP1', 'NF1', 'DHX15', 'STYK1', 'DNAL4', 'FAM167A', 'TMEM125', 'PCBP4', 'INTS4P1', 'CORO1C', 'IGSF11', 'CDC73', 'WRNIP1', 'CD244', 'LOC399815', 'KIAA0408', 'KLHDC8B', 'MGAT5', 'KRT12', 'SLC4A3', 'P2RX6', 'SNAR.E', 'ETAA1', 'DNAJA4', 'USP22', 'GDF7', 'PPP1R3F', 'ICA1L', 'BMI1', 'SERPINA3', 'LINC01001', 'RTN4RL1', 'DYSF', 'COG2', 'SMPDL3A', 'CCL7', 'TTC38', 'COL5A1', 'SNX13', 'ACYP2', 'FAF2', 'DNAAF3', 'SSX9', 'IGFL4', 'BCAS3', 'TCF15', 'RASA4', 'FAM41C', 'SNORD114.18', 'ZAR1L', 'IL4', 'NDRG2', 'CHGA', 'ADCY7', 'DEFB110', 'SNORD115.48', 'RBBP5', 'PTGER3', 'LOC100133331', 'ZNF48', 'ALG3', 'RPS26P11', 'C14ORF1', 'LINC00488', 'LINC00176', 'SAV1', 'ENKD1', 'OXSM', 'ITFG1', 'GAB3', 'MITF', 'MC1R', 'XPNPEP2', 'PWP2', 'ZNF257', 'WTIP', 'MSANTD3', 'PRAMEF22', 'GALR1', 'METTL23', 'EIF1AD', 'TKTL2', 'RBMY1B', 'EPHA8', 'RAD54B', 'TLR3', 'MFSD8', 'ARHGAP21', 'CES4A', 'NCR2', 'MAPK8IP1', 'CPLX2', 'PPP4R2', 'FURIN', 'SMIM7', 'SNORD45A', 'FLNB', 'TPBG', 'SLC6A17', 'RMI1', 'PRAMEF8', 'SLC35G2', 'CCDC85A', 'AASDHPPT', 'OR51B5', 'SH2B2', 'DUSP14', 'GPR19', 'OCM2', 'BTF3P11', 'CD300A', 'F2', 'SUGT1', 'GDAP2', 'CCDC181', 'LRRC1', 'SCN4A', 'MTCP1', 'TMEM218', 'POMGNT2', 'PRDM11', 'EGR1', 'ZNF83', 'KRT8P41', 'EGF', 'CUL2', 'ADGRF4', 'AMICA1', 'SLC30A2', 'ITIH2', 'BAG5', 'STAM2', 'SI', 'TARSL2', 'P2RY4', 'SEPT7P2', 'CT47B1', 'FAM43A', 'NDUFA13', 'CYBRD1', 'TPM1', 'DBI', 'SNORA38', 'TCAP', 'GPAM', 'ADAMDEC1', 'ST3GAL1', 'HIBCH', 'TPI1', 'SNORD59A', 'KRT222', 'TREML4', 'UBQLNL', 'DYNC1LI1', 'CARD16', 'MAF', 'RBBP4', 'CLN8', 'ZNF263', 'UTP6', 'ZNF285', 'SLFN13', 'SNORD9', 'LINC00998', 'C9ORF156', 'ABCA12', 'GEMIN5', 'CLDN1', 'LTA4H', 'CX3CR1', 'HCFC1R1', 'HMCES', 'FGD5', 'ALS2CR11', 'BCCIP', 'SCARA3', 'SMNDC1', 'CPEB3', 'PCOLCE', 'MAGEE1', 'TMEM207', 'PEX10', 'ATP6V1C1', 'UBAC1', 'CUEDC2', 'SMOC1', 'GAGE1', 'LOC100133920', 'GUSBP2', 'SLC35A5', 'PCDHGC4', 'LRIT1', 'CMTM4', 'SCGB1A1', 'IL22', 'BACH1', 'FOXO3', 'METTL11B', 'PDP2', 'CRYZL1', 'FAM212A', 'ROM1', 'NPHP1', 'G2E3', 'UNC93B1', 'ZNF687', 'DOK5', 'TTI2', 'SLC39A13', 'TSPAN6', 'CD68', 'PAK1', 'YBX2', 'NUPL1', 'RFPL3', 'TBPL2', 'DISC2', 'NINL', 'MRPL23', 'FOXL2NB', 'ZBTB10', 'LOC148696', 'ZNF236', 'STEAP1B', 'USP14', 'TIMM44', 'ITM2B', 'GAL', 'TINAG', 'OR1K1', 'PITHD1', 'SKINTL', 'WNT9A', 'CIAPIN1', 'SH3RF1', 'RANBP10', 'TPP2', 'MTFMT', 'METTL1', 'EYA1', 'ACSL1', 'ADM', 'NRIP1', 'COA3', 'LHX5', 'ELN', 'ZNF90', 'CRNN', 'STX10', 'PADI1', 'CYFIP2', 'PCIF1', 'NXF2', 'RPL12', 'CNTN4', 'PIGM', 'SPINK14', 'PLOD1', 'CNTRL', 'MARCH6', 'MCM2', 'SCOC', 'CDCA5', 'BCORP1', 'CP', 'LINC00917', 'YAF2', 'C8ORF82', 'CRELD1', 'PCDH15', 'TMX3', 'WNT8A', 'CCNH', 'MFSD4', 'FAM65A', 'RBM4', 'MPV17L', 'HIAT1', 'HPSE', 'C9ORF47', 'MGC16275', 'TEAD4', 'C9ORF171', 'DCBLD1', 'OSCAR', 'GPM6B', 'IL1RL1', 'NLRP6', 'HSCB', 'SLC2A14', 'SLC12A8', 'PDE9A', 'SLC4A2', 'NTN4', 'FIZ1', 'OR13C2', 'KLHL42', 'ZNF600', 'WDR37', 'FAM58BP', 'RSU1P2', 'SIRT6', 'NDUFB1', 'DDX20', 'ATG9B', 'MARCH9', 'NOL4L', 'TOPAZ1', 'SFPQ', 'KANK2', 'MED22', 'TMEM88', 'WNT2', 'PCDHA11', 'TMED5', 'CKS1B', 'GAB2', 'ZNF324', 'UGT3A1', 'BSPRY', 'ATG16L2', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.46306540371638005 Spearman Correlation: 0.41469760737406147 Coefficient of Determination: -0.12211793794107106 RMSE: 0.20690726558367478 NRMSE: 0.13329506560391355 MAPE: 339.6034224450244 Pearson Correlation: 0.0046148616076575645 Spearman Correlation: 0.1018104580621572 Coefficient of Determination: -3.284064675977778e+26 RMSE: 3500946271643.303 NRMSE: 2369779447816.8745 MAPE: 4147332636623750.0 Predictor: ElasticNet Pearson Correlation: 0.3197606445197666 Spearman Correlation: 0.3224717453758727 Coefficient of Determination: 0.054925258804741084 RMSE: 0.1898845224921504 NRMSE: 0.1223285698129492 MAPE: 141.88645612237286 Pearson Correlation: 0.061896936492714424 Spearman Correlation: 0.08117326140773454 Coefficient of Determination: -0.017106365753327024 RMSE: 0.19483311821243357 NRMSE: 0.1318819209062522 MAPE: 143.67347518192912 Predictor: RandomForests Pearson Correlation: 0.4421408464843656 Spearman Correlation: 0.43271970149405903 Coefficient of Determination: 0.09463506570323654 RMSE: 0.18585246417702356 NRMSE: 0.11973101251539608 MAPE: 129.31661265507898 Pearson Correlation: 0.03967731585684438 Spearman Correlation: 0.10089528069311221 Coefficient of Determination: -0.022528309379985956 RMSE: 0.195351731673774 NRMSE: 0.13223296871638293 MAPE: 134.69936098657652 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['GPR87', 'C20ORF195', 'TRPS1', 'ALDH5A1', 'PDCL', 'COPS4', 'LUZP1', 'SIAH3', 'SIL1', 'ALAD', 'BCL9', 'ABCA8', 'C4ORF33', 'ALX1', 'C11ORF80', 'GTF2H3', 'PVR', 'SIN3A', 'C16ORF82', 'KCNQ3', 'EHD1', 'GRM6', 'GTF3A', 'VBP1', 'SRCIN1', 'RFNG', 'GPANK1', 'CALCRL', 'CACNG3', 'PLA2G5', 'OR2W1', 'SYT6', 'GRM3', 'SLC9A1', 'MKI67', 'ARSJ', 'SLC25A5.AS1', 'FGD2', 'GOLGA6L5P', 'ZNF99', 'DMRT2', 'GNAS.AS1', 'PQLC2', 'USP2', 'NPHS1', 'OR51B6', 'GJA1', 'MYH2', 'SOX13', 'HDAC10', 'ATP6V1G2', 'MYO18B', 'ZBTB42', 'MS4A2', 'SH3D19', 'EIF4E1B', 'ETV3', 'LRRFIP1', 'DIP2B', 'NCSTN', 'MTMR8', 'DMRT3', 'RPL18A', 'KLHL2', 'TUBD1', 'FTHL17', 'ACVR2B.AS1', 'PTGES2', 'CAPN12', 'USP18', 'SLC27A4', 'TAS2R30', 'S100A16', 'ZNF740', 'SLC2A7', 'TLE6', 'RPLP0P2', 'RIPK4', 'OR2D2', 'IL6', 'COL1A1', 'JAM2', 'LOC100270804', 'SHC1', 'MYOT', 'TRUB1', 'ORMDL2', 'CLLU1', 'ICAM3', 'MYCNOS', 'ZMYM6', 'VN1R1', 'TDO2', 'PTCH2', 'WWC1', 'PARP14', 'CCDC129', 'MS4A6A', 'EYA3', 'DNAH8', 'NF1P2', 'NSUN6', 'DUOX1', 'HCG9', 'KBTBD6', 'GRIP2', 'LRIG3', 'BPNT1', 'KCNN4', 'COL7A1', 'WIBG', 'TRMT112', 'TMEM181', 'METTL21C', 'OR2C1', 'SEC63', 'KIAA1671', 'CDRT15', 'LSM14A', 'PDE1C', 'APOC3', 'NIPSNAP1', 'FANCL', 'ZNF578', 'TAF9B', 'PAFAH1B3', 'ZFYVE21', 'BRD7P3', 'TCAF1', 'RRM2', 'TRIM29', 'FAM72A', 'LMNB1', 'CTAGE10P', 'ZZZ3', 'TFCP2', 'SOS1', 'BCAS1', 'SCARB2', 'LINC00593', 'ALG1L2', 'SLC47A2', 'BCRP3', 'SQRDL', 'EXOC1', 'TRPC4AP', 'MANF', 'CYLC1', 'NDRG2', 'MRPL11', 'FAM167A', 'STK24', 'ATL2', 'EIF4EBP1', 'AGR3', 'CIB1', 'LINC00623', 'C16ORF90', 'MACROD1', 'AKR7L', 'CYP3A5', 'CCDC186', 'SNORD4A', 'PPOX', 'ZC3H12B', 'PIP5K1P1', 'XPR1', 'NPR3', 'PLGLA', 'FBXW8', 'TAS2R5', 'STX1B', 'TOP1P1', 'ARHGAP25', 'SMG8', 'ACOT1', 'COMMD4', 'TAP1', 'SMC2', 'PLP2', 'CYB561A3', 'SPDYE4', 'SMAGP', 'PPBP', 'CLDN23', 'PSAPL1', 'POTEC', 'OR6A2', 'ALG11', 'RAB3IP', 'CD163L1', 'TAS2R43', 'MSH5', 'ARL16', 'TTTY18', 'FSCB', 'UCP1', 'LEP', 'FMNL3', 'PRDM15', 'SLC27A6', 'TMEM170B', 'FARP2', 'PPP3CA', 'CAMK2N1', 'LINC01341', 'FCRL3', 'FRRS1', 'ZBTB16', 'BCLAF1', 'SNORD116.1', 'ZSWIM7', 'DNAJC22', 'TIGIT', 'C4ORF19', 'ZNF84', 'LRRC20', 'SEC23B', 'ELK3', 'C17ORF98', 'BACE2', 'USP32', 'TRAPPC2', 'HMP19', 'DNAJC21', 'CEP41', 'OR8J1', 'PNO1', 'ZSWIM8', 'C15ORF56', 'MAGEA3', 'LIG4', 'EXOC4', 'CMAS', 'ZNF569', 'ATP6V0E2.AS1', 'OR5AK2', 'CDC42EP5', 'LCE3E', 'NAT6', 'ALG12', 'TAS2R60', 'UBALD1', 'TTTY9B', 'C21ORF2', 'ZFP64', 'RDH16', 'WNT8A', 'ZNF433', 'ZIM3', 'LOC440461', 'LIN28B', 'AGK', 'SLK', 'OR2T10', 'ZMAT3', 'ZNF416', 'EDA', 'PRSS41', 'OCRL', 'VCP', 'CCDC137', 'SAMD1', 'UGT2B7', 'WDR24', 'LINC00483', 'NADSYN1', 'HOXD8', 'SSB', 'HPDL', 'PRR20B', 'RPL13AP17', 'RFTN2', 'CIAPIN1', 'LINC00471', 'LINC01102', 'MAGEC1', 'ZNF560', 'NCBP2.AS2', 'GLE1', 'TMEM30C', 'MCM6', 'SLC9A8', 'GATB', 'PCOLCE2', 'SSX4', 'LOC400043', 'TFG', 'GNB1', 'EPB41L2', 'HIST2H3C', 'RHOA', 'TXLNGY', 'SSH2', 'SNORD17', 'SYCP2L', 'RNF150', 'MS4A14', 'CAND1', 'TRIM14', 'C2CD4B', 'DUSP6', 'UBE3B', 'ABCC10', 'ARMC5', 'ADAM6', 'STAU2', 'PPP2R1A', 'OR2A14', 'MMEL1', 'CBX3', 'YAF2', 'PTAR1', 'SORBS1', 'DHFR', 'LEF1', 'TIMM21', 'XG', 'GRK5', 'GZF1', 'HAUS6', 'FUNDC1', 'FERD3L', 'MIEN1', 'WDFY4', 'SFT2D1', 'SNORD45B', 'PPP4R1', 'YWHAH', 'CEP72', 'DOPEY1', 'VWF', 'ACTL7A', 'BTG4', 'TYW1', 'OR10R2', 'TACC2', 'FCMR', 'ELP5', 'LINC00319', 'PCDHB7', 'C2ORF48', 'PLCB2', 'ASTL', 'DCTN1', 'GPR176', 'SNORD36A', 'PPBPP2', 'OGG1', 'CD163', 'ACMSD', 'TAMM41', 'MKNK2', 'KLK9', 'SERPINB7', 'SRSF2', 'TMEM187', 'OR5AN1', 'ZNRD1.AS1', 'TRANK1', 'ZNF689', 'IRGQ', 'SMIM14', 'PRICKLE3', 'XAF1', 'KIAA0408', 'LOC256880', 'ZNF788', 'SRP54', 'GTF2IRD1P1', 'RPL23AP53', 'DDT', 'VGLL4', 'TRIM37', 'ITGA11', 'TANGO2', 'RARA', 'HAS1', 'STK38L', 'HSPE1', 'SGPP1', 'LRRC4C', 'ATMIN', 'DOCK1', 'C14ORF28', 'PSMD11', 'CHST10', 'ACER2', 'DICER1.AS1', 'HRH1', 'ITGAL', 'PMP2', 'CD63', 'IL10', 'ZDHHC4', 'FXN', 'MBOAT2', 'AGTPBP1', 'EPO', 'CALML5', 'CETN4P', 'MBNL3', 'FBRS', 'SCGB1D1', 'DNM1P46', 'CASC5', 'CCDC153', 'RNF168', 'ACVR1', 'CYFIP2', 'ARHGEF15', 'PIK3C3', 'TMEM5', 'GGH', 'NCKAP1', 'OST4', 'BTN3A2', 'VCX', 'AATK', 'NDP', 'TPCN2', 'PEBP4', 'PGM5', 'CABLES1', 'BPIFB3', 'CLDN19', 'KLLN', 'EMILIN3', 'ZNF347', 'SRRT', 'NELFB', 'ADGRE4P', 'SMAP2', 'ILKAP', 'JDP2', 'PDE7B', 'RBM25', 'CPT1C', 'CHURC1', 'BRK1', 'SYNDIG1', 'CFL1P1', 'TSC22D3', 'SUV420H1', 'BCAR4', 'IGIP', 'ZAK', 'CASC2', 'IZUMO2', 'SPAM1', 'FBXO24', 'C11ORF49', 'MYCN', 'C5AR2', 'VPS26A', 'SEPT9', 'COG4', 'BRF2', 'ANKRD33', 'ARHGEF10L', 'OR10A4', 'MOV10L1', 'C9ORF57', 'HFE', 'NPAS1', 'PKD1', 'OSTC', 'KLHL36', 'CXCL8', 'CITED1', 'STRA8', 'EPHX2', 'SPTAN1', 'PHF21B', 'KRTAP10.4', 'ETFA', 'OR5B12', 'KLHDC9', 'LEUTX', 'UHRF1BP1', 'ZSCAN5B', 'COL4A6', 'IFITM1', 'CCR6', 'YWHAB', 'MTIF3', 'SNORD115.9', 'MTIF2', 'SDE2', 'BDH1', 'CDC20B', 'SS18', 'JRKL', 'INSL4', 'DCHS1', 'TXNIP', 'NRBP1', 'RGSL1', 'ANXA8', 'DYNLRB1', 'UBL3', 'TMBIM6', 'TREML5P', 'KIAA1467', 'HNRNPUL1', 'PAGR1', 'NPY', 'DBH', 'SNORD113.1', 'CYS1', 'EFNB2', 'PARD6A', 'PGAM5', 'RASAL2', 'VPRBP', 'CNGB1', 'MRPS35', 'MYO10', 'CCL28', 'HEXIM2', 'GPRASP1', 'HMGCL', 'IQCF6', 'HSPA13', 'ADGRE1', 'FETUB', 'EIF3B', 'IFRD2', 'PTMS', 'RHBG', 'KLF3.AS1', 'PIGO', 'RNF157', 'TNFRSF1A', 'KCNN3', 'GPHN', 'TRDN', 'DPY19L2P1', 'CAPZA2', 'ARID3A', 'CNN3', 'ROGDI', 'SULT2A1', 'CTSH', 'C17ORF89', 'STIM1', 'ADAT1', 'PSMA7', 'FBXW7', 'PPEF1', 'CCT3', 'OARD1', 'LSMEM2', 'RPS13', 'OR9A4', 'UCP2', 'CCDC51', 'CHDH', 'ABHD11', 'C9ORF163', 'SNORD113.7', 'TMEM59', 'EMILIN1', 'GPSM1', 'SUPT20HL2', 'VPREB1', 'ANKRD9', 'SPCS2P4', 'MED13L', 'NDN', 'C5ORF24', 'USP22', 'ACVR2B', 'PTPN1', 'CAND2', 'GDI1', 'ZFP92', 'GRM5', 'KCNC3', 'ADAMTS7', 'METRNL', 'ERGIC1', 'INTU', 'OSBPL2', 'NFU1', 'PDCD2L', 'IFNG', 'LINC01465', 'HADH', 'HIVEP3', 'SNX16', 'PI4KB', 'COX5B', 'KREMEN1', 'APOM', 'UBTFL1', 'PCBP2', 'ADHFE1', 'EPB41L1', 'UBC', 'C1QL4', 'RHNO1', 'DHCR24', 'COL11A2', 'FADS2', 'MYO3A', 'FOPNL', 'VCY', 'LRFN4', 'UCHL5', 'DOK6', 'PHIP', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.5631397771971682 Spearman Correlation: 0.5258279320273747 Coefficient of Determination: -0.36296084973500853 RMSE: 0.7744281890354915 NRMSE: 0.1750713663468953 MAPE: 719.8941379459443 Pearson Correlation: -0.22984934472047455 Spearman Correlation: 0.10898174016472466 Coefficient of Determination: -1.1630459515537446e+23 RMSE: 229663715874.93787 NRMSE: 62044444530.72668 MAPE: 15876891748132.719 Predictor: ElasticNet Pearson Correlation: 0.586435881181491 Spearman Correlation: 0.516795268119538 Coefficient of Determination: 0.313267215944672 RMSE: 0.5497096394537614 NRMSE: 0.12427029263112045 MAPE: 289.99559269613 Pearson Correlation: 0.3966501442743633 Spearman Correlation: 0.4088674275680422 Coefficient of Determination: 0.15204641895208393 RMSE: 0.6201260703302129 NRMSE: 0.16752919557224252 MAPE: 285.4584355363593 Predictor: RandomForests Pearson Correlation: 0.5201976042955172 Spearman Correlation: 0.4256378160540372 Coefficient of Determination: 0.2073931089800295 RMSE: 0.5905659237973793 NRMSE: 0.1335064821515495 MAPE: 232.17661163001688 Pearson Correlation: 0.3231664359542597 Spearman Correlation: 0.39613792834457956 Coefficient of Determination: 0.09403648648010776 RMSE: 0.6409871216688328 NRMSE: 0.1731648805027104 MAPE: 148.87008550880444 Protein: TP53 x_train_column_count: 1002 x_train columns: ['SBDSP1', 'TXNDC15', 'NOP56', 'CCDC69', 'ZNF433', 'IDE', 'FAM204A', 'FGF7', 'TBC1D2B', 'RPP21', 'ANGPTL1', 'SS18L1', 'TMEM161B', 'WBP2NL', 'APOL6', 'WNT6', 'CBX1', 'OR2T35', 'ITGA6', 'PALD1', 'DCUN1D5', 'RNASEH2A', 'METTL24', 'KATNAL2', 'HNRNPC', 'TSC22D4', 'ERAS', 'CEP97', 'GIMAP2', 'TMIGD2', 'ATP6V1C2', 'QPCT', 'LOC283332', 'NID2', 'TCF12', 'FAM126A', 'FUS', 'SLC22A20', 'LRRC75A', 'TM6SF1', 'DNAJB1', 'HOXA11', 'MS4A14', 'NUTF2', 'ZG16B', 'EXOSC7', 'MAD2L1BP', 'PINK1', 'DNAH3', 'PRAMEF4', 'UBE2F', 'C16ORF54', 'ZNF525', 'ZNF101', 'TGFB1I1', 'ARRB2', 'ITGB1', 'TAF15', 'TNRC18', 'CCDC183', 'PTPRN2', 'MBLAC2', 'TEKT1', 'ASXL3', 'GALR1', 'TOMM7', 'NSA2', 'WTAP', 'ZFX', 'CEP44', 'C1ORF111', 'FAM169B', 'GPR52', 'BPIFA2', 'ANKRD66', 'MPP4', 'GSDMB', 'CHCHD10', 'KC6', 'CCBL1', 'KCTD16', 'PSMB2', 'CDKN2AIP', 'KAT6A', 'MARCH6', 'EXOSC1', 'UGT1A6', 'LINC01588', 'HAGH', 'SYS1.DBNDD2', 'FABP5', 'PDE7B', 'OTUD7B', 'GJA3', 'KRTAP19.7', 'CDC16', 'MAP3K5', 'DIRAS1', 'ESYT3', 'LUZP2', 'CELF6', 'GNMT', 'SPIN3', 'ZDHHC5', 'LOC400736', 'ACTA1', 'MESDC2', 'UBN1', 'TMEM86B', 'MT1E', 'BATF2', 'SPAG4', 'GCNT7', 'ARHGEF15', 'GIT1', 'IQCC', 'NOX4', 'CDC42SE2', 'C9ORF173', 'CHRFAM7A', 'IKBKG', 'LOC493754', 'CPOX', 'BEST2', 'RNF185', 'GC', 'NRM', 'MYL6B', 'ARSJ', 'TCEB2', 'IL27RA', 'HSPA6', 'SCARNA23', 'GUCY1A2', 'RAX2', 'YPEL4', 'FAM47C', 'TMEM69', 'GOLGA8F', 'IRGM', 'KIAA0754', 'PP7080', 'AKIRIN2', 'UGT2B11', 'MRGPRD', 'EPHA1', 'PLEC', 'S100A9', 'OR4X1', 'UQCRHL', 'CABYR', 'ARL15', 'MTMR2', 'SLC8A1', 'ADAM9', 'NME4', 'ZFAND5', 'NUCB1', 'OR4C16', 'NR2F6', 'SNORD116.8', 'GGT1', 'OSR1', 'ZNF16', 'HHIP', 'DEDD2', 'ABCD2', 'HEXIM1', 'PPM1A', 'SLC12A2', 'ZNF805', 'SLC16A4', 'PIGP', 'LRRN4', 'ADH4', 'EFHC1', 'ZSWIM3', 'AURKB', 'ZKSCAN1', 'CSN1S2AP', 'RASL12', 'NFE2L3P2', 'TFAP4', 'RBMY1E', 'FABP9', 'C17ORF50', 'SOX8', 'QSOX1', 'STK17A', 'MYCL', 'ZNF608', 'APH1A', 'STEAP1B', 'YIPF4', 'TMEM189', 'SMG6', 'KLC4', 'KCNS3', 'MMS19', 'WASF2', 'THAP1', 'KRT37', 'C3ORF35', 'ZADH2', 'PPIF', 'RASGRP3', 'MAGEA5', 'CTSZ', 'GIP', 'CIRBP', 'HES4', 'FIG4', 'PCDH9', 'ZNF154', 'DHX57', 'AP3S2', 'GJD4', 'TMED8', 'MAGEA4', 'RASGEF1C', 'TKTL2', 'GLIDR', 'TOP1MT', 'MEP1A', 'WIPF1', 'STRN3', 'SNORA36C', 'HLF', 'TTYH1', 'SLC35E3', 'SHE', 'PPAPDC3', 'KIF1BP', 'VPS54', 'ZNF879', 'FAM183CP', 'SNORD32B', 'NFE2L3', 'FOXP1', 'NIPAL4', 'TAS2R46', 'TOP2B', 'SYNPO', 'GIPR', 'SCG5', 'LRRC37B', 'SLC10A1', 'ARL14EP', 'SMIM19', 'MTAP', 'ZNF561', 'PRSS42', 'TIMM21', 'SZT2', 'NAP1L6', 'LRRTM2', 'LINC00469', 'RNF19A', 'TACC3', 'SV2C', 'CAV1', 'DYX1C1', 'OR6S1', 'FAM124A', 'NARF', 'CADPS', 'IFNG', 'SYPL2', 'RAB8B', 'CATSPER3', 'FAM173A', 'LOC284661', 'EIF2B5', 'ARIH2', 'PRAMEF14', 'CTSW', 'OR52B6', 'LBH', 'SNORD29', 'OCIAD1', 'AUP1', 'BEX5', 'EFNB2', 'PI4KB', 'CYP2A6', 'MAFG.AS1', 'LOC152225', 'HERC2P2', 'ALG9', 'CCDC142', 'OR1N2', 'TMEM38A', 'DTX3L', 'VCP', 'C1ORF189', 'SLC6A20', 'MYLK4', 'TBL1X', 'SPTBN5', 'NOP10', 'ZSCAN22', 'EGR3', 'LMO3', 'FOS', 'IL21', 'WDR87', 'NPTX2', 'DCLRE1B', 'N4BP2L2', 'HSDL1', 'KCTD9', 'GSTA2', 'NOSIP', 'ZPLD1', 'MLF1', 'FAM182A', 'FRA10AC1', 'CEP112', 'GAS2L1', 'CCDC42', 'OR2B6', 'PIGN', 'SRXN1', 'NDUFB11', 'PDE3A', 'C1ORF116', 'MED18', 'SLC1A2', 'NKX6.1', 'PAGE2', 'RYK', 'AADAC', 'ALDH18A1', 'OAZ3', 'POF1B', 'TREML2', 'PTCHD2', 'ZNF580', 'BUB1', 'DYRK4', 'NT5M', 'INTS3', 'GRAP', 'CEBPD', 'IP6K2', 'GDF3', 'PCDHB7', 'LOC100132287', 'LCE2B', 'RHOG', 'PRTN3', 'DHFR', 'AMHR2', 'WBSCR28', 'CELF3', 'LTBR', 'RCAN3', 'LRRTM3', 'KCNV1', 'A2M.AS1', 'MRPL44', 'ZIC3', 'DPH5', 'ELN', 'PSIP1', 'HMBOX1', 'KDM8', 'DNAJC27', 'ENOX2', 'SPATA31D5P', 'ZBTB9', 'GPR62', 'TRIP10', 'HLA.DRB5', 'NUDCD2', 'NFKBIB', 'TMEM181', 'FAM84A', 'PDIA5', 'MS4A4A', 'OR1L1', 'PAX5', 'RNF220', 'TTTY23', 'EIF4EBP3', 'SRGN', 'TST', 'NEU1', 'REEP1', 'LINC00476', 'HOXB8', 'CACNG6', 'TTC33', 'TBCD', 'SPP1', 'HIGD2B', 'C17ORF53', 'PPM1G', 'COL26A1', 'TMEM176A', 'CKAP2L', 'SLC16A2', 'TAAR6', 'OR4D6', 'SMARCAD1', 'FAM83G', 'PTPMT1', 'MKKS', 'RPAP1', 'RNF222', 'CEP126', 'ZNF140', 'NIPBL', 'SP5', 'LOC340017', 'ST6GAL2', 'NF1P2', 'SP140L', 'ABL2', 'BCAS4', 'FOXO3', 'BRINP1', 'ATXN3', 'PVRIG', 'SKOR1', 'ITGA5', 'MUSTN1', 'WDFY4', 'GAS1', 'TMCO3', 'CLCN1', 'SH3PXD2A', 'INSC', 'TRAPPC6A', 'IGFBPL1', 'EMD', 'ALPK3', 'FHL3', 'RAB8A', 'G6PD', 'BLMH', 'DTHD1', 'PTDSS1', 'SETD8', 'SPATA24', 'FBXL19.AS1', 'BAP1', 'AZIN2', 'TFAP2C', 'CATSPERD', 'PTPN7', 'VRTN', 'RAPGEF3', 'NCF1C', 'DNASE1', 'SNORD114.21', 'LANCL1', 'TAF10', 'PRR34.AS1', 'DRAM2', 'OR10R2', 'NKTR', 'PDE6C', 'SLC9A4', 'CCDC88C', 'LOC647859', 'TMEM8B', 'SLC45A2', 'SNORD115.3', 'CA7', 'TMED3', 'HSPB7', 'YTHDC2', 'PTP4A3', 'ACLY', 'LGALS13', 'FAM183B', 'ZNF223', 'CCDC85C', 'WWC2', 'NCOA1', 'HIST1H2AH', 'ABHD4', 'ZBTB33', 'MYL2', 'GALNT11', 'IFNA13', 'USP44', 'TMEM52', 'PSMD5.AS1', 'TAPBPL', 'RNF43', 'SHISA6', 'PSMA8', 'SPG20', 'ABCD3', 'IQCF3', 'CBX6', 'TDRP', 'TACSTD2', 'DAZL', 'GALNT16', 'SNORA28', 'SEZ6L2', 'PCDHB15', 'USP17L6P', 'MAPK8', 'NPNT', 'MSI1', 'CHRDL1', 'STEAP2', 'TRAPPC2B', 'HAO2', 'LINC00598', 'LINC00470', 'APBB2', 'PAFAH2', 'HAPLN1', 'APLF', 'MIR155HG', 'NPM3', 'SESN2', 'PRG1', 'NPEPPS', 'MAPK8IP1', 'RPS6KA4', 'CDHR2', 'KRTAP19.2', 'IFNB1', 'HARS', 'ADORA2A.AS1', 'TMEM114', 'C8ORF76', 'TTTY17B', 'UTF1', 'OR2L1P', 'PTGER2', 'CNTN6', 'SPNS1', 'MPO', 'MRPL36', 'DCD', 'DAD1P1', 'HRG', 'OPALIN', 'FGF11', 'CHKA', 'EIF3B', 'C10ORF105', 'PTRH2', 'LGALS8', 'SNORA31', 'TIMM44', 'PUM1', 'SYN2', 'UBASH3B', 'GALNT4', 'QSOX2', 'TNFRSF21', 'STK16', 'FTHL17', 'RIPK2', 'ANKLE1', 'ZXDB', 'PALLD', 'SLC46A3', 'MRPL23', 'PCDH17', 'MICAL1', 'GREB1L', 'PF4', 'PCYT1B', 'SFMBT1', 'ZNRF2', 'C11ORF68', 'LINC00312', 'CTNND2', 'SCO2', 'TNFSF12.TNFSF13', 'C6ORF141', 'DR1', 'RRAGC', 'TMEM30A', 'CBLN4', 'OR56A3', 'ATG5', 'SNORD115.48', 'ZNF808', 'SYNGR2', 'BLVRA', 'PCDHA6', 'SHROOM1', 'GRIN3A', 'UNCX', 'TMEM200B', 'SLC5A9', 'EBP', 'MFSD8', 'PPP2R2D', 'BAALC', 'GAB2', 'R3HDML', 'SENP1', 'KCMF1', 'SLC25A36', 'SH2D6', 'PSD3', 'DNMBP.AS1', 'LINC01465', 'NUTM2G', 'DUSP15', 'FOXD4L1', 'LINC01105', 'NME7', 'CTCFL', 'CPQ', 'KYNU', 'TUSC7', 'LYPLA2', 'TMEM143', 'ZNF138', 'PHF2', 'MDH1B', 'LINC00589', 'HENMT1', 'C19ORF57', 'RYBP', 'LINC00167', 'PRSS36', 'TRA2A', 'LYRM2', 'NRK', 'LRRK1', 'OR4D5', 'SGK3', 'C12ORF57', 'MTFP1', 'LDHC', 'AXIN1', 'KRTCAP3', 'GYG2', 'CDK5R1', 'GNPTAB', 'ASAP1.IT1', 'TTK', 'ALG8', 'KLHDC4', 'EHMT2', 'SERHL2', 'NKX3.1', 'NUFIP2', 'GRAMD1A', 'MT3', 'VDAC1', 'HPCAL1', 'FAM86C2P', 'MTHFD2', 'DPYSL2', 'LAS1L', 'HTR2A', 'H1FX.AS1', 'IHH', 'PRODH2', 'FAM155A', 'C3ORF17', 'METTL4', 'PES1', 'KIAA0753', 'MMP10', 'OR7G2', 'ZNF552', 'PXYLP1', 'CDHR5', 'FAM21A', 'TECPR2', 'SVEP1', 'GPATCH3', 'MUT', 'TMEM236', 'RIOK1', 'POLD1', 'MTO1', 'CYP2C9', 'HDAC6', 'UBR5', 'TLE1', 'C14ORF166', 'FBXO36', 'GALK1', 'OR4D11', 'FOXK1', 'RPS6KA5', 'WFDC10B', 'MRPS15', 'BAX', 'RLN1', 'TOPORS', 'SLC6A11', 'STT3B', 'CCDC103', 'PCDH11X', 'UBL4A', 'LY86', 'MECR', 'SLC6A4', 'GPRIN2', 'FERD3L', 'CAPN15', 'PA2G4P4', 'TUBD1', 'GP1BA', 'MTMR12', 'ATP6V0C', 'STARD13', 'TXLNGY', 'ATAD5', 'SLC2A3', 'TTC31', 'DNAJB8', 'SNX27', 'GOLGA6L5P', 'OR5H6', 'TBC1D3B', 'RHOBTB2', 'EDA', 'EIF3CL', 'PRICKLE4', 'BMS1P5', 'FAM129A', 'MAGEB18', 'TECR', 'CTNS', 'OR10X1', 'MASTL', 'IL36B', 'MTHFSD', 'PREX1', 'LINC00111', 'DDB1', 'HNMT', 'GPR150', 'LOC100190940', 'PLSCR2', 'ULK1', 'CYTH2', 'BVES', 'PPIAL4G', 'GEMIN5', 'FN3KRP', 'TPM2', 'GPR19', 'PDZD8', 'FCGR1B', 'TMCO4', 'ATF6B', 'CCDC121', 'MYO15A', 'GRB2', 'TEX15', 'FOXJ1', 'PIPOX', 'TCP10L', 'PRKCG', 'BRMS1L', 'ZNF19', 'SNORA41', 'ANKRD34C', 'ZCCHC6', 'LSM2', 'OR5A1', 'PPT1', 'ARRDC3', 'OR2T2', 'JADE3', 'LINC01366', 'MOSPD1', 'ERI1', 'APIP', 'RPS6KC1', 'RAB7A', 'AMELY', 'TLE3', 'IL3', 'LOC285074', 'OR6F1', 'VLDLR.AS1', 'PNPLA3', 'SLC28A1', 'TRIM47', 'CAAP1', 'CRTAP', 'KIAA1324', 'UPF3A', 'YIF1A', 'VAMP8', 'NR5A1', 'LRRC75B', 'SLC25A20', 'MAN2C1', 'LINC01600', 'C1ORF210', 'MUS81', 'FAM214B', 'GTPBP6', 'CFP', 'C20ORF27', 'TRIM26', 'ZNF579', 'SGPL1', 'KRTAP26.1', 'KIF16B', 'PAIP2', 'LOC401127', 'CHTF18', 'CNBD1', 'LRRC37A6P', 'CH25H', 'OS9', 'LOC389705', 'ZNF773', 'PAK2', 'SERF2', 'LPAR6', 'FLJ42627', 'YRDC', 'TMEM198', 'CHRM4', 'RPL11', 'TLL2', 'F2R', 'ASB13', 'CLASRP', 'RHOBTB1', 'NRADDP', 'PLEKHA7', 'TCEAL5', 'SSB', 'GRASP', 'CES1', 'CYP4F12', 'KRTAP15.1', 'RGAG1', 'DENND5B', 'HNF1A', 'AGBL5', 'KRTAP5.1', 'KCNK10', 'DXO', 'WNT8A', 'TSPAN33', 'KCNA1', 'SNORD115.27', 'TIGD2', 'SLC25A19', 'SYAP1', 'KHDRBS2', 'CXORF51A', 'PHF7', 'ZNF709', 'LGALS14', 'BCL2A1', 'DNM1P35', 'CT45A2', 'TGM3', 'TXNRD1', 'FASTKD5', 'DICER1', 'C16ORF52', 'C9ORF117', 'FIGLA', 'DLX4', 'RPN2', 'SLAMF6', 'C19ORF60', 'YME1L1', 'PITPNC1', 'WDR12', 'SOX13', 'GJB7', 'SOS2', 'VCPKMT', 'RPS13', 'ANKRD6', 'ZNF765', 'CILP', 'LSM3', 'CERKL', 'SNORD115.5', 'ZNF157', 'MEX3A', 'GJC3', 'DCAF12', 'C1ORF64', 'PYGO1', 'VPS45', 'GAGE8', 'TEX2', 'PODXL', 'BRD2', 'SLC19A2', 'CEACAM1', 'DDX28', 'KRT71', 'GXYLT1', 'STS', 'PNISR', 'DNAJC17', 'AKAP9', 'C11ORF52', 'FAM83A.AS1', 'CLCC1', 'ZNF79', 'LAIR2', 'TDRKH', 'BUD13', 'C6ORF132', 'CCDC84', 'BET1', 'TBC1D2', 'SDPR', 'MAP3K12', 'LOC441204', 'GOLPH3', 'PGLYRP4', 'DSCR10', 'SERPINB1', 'LETM1', 'FAM138E', 'KCND1', 'ALX3', 'DNAH6', 'OR1E2', 'OR7D2', 'UCP1', 'FAM207A', 'PSMC6', 'SCARNA5', 'ULK4', 'OR51B6', 'NANOGNB', 'AJUBA', 'DCHS1', 'MESTIT1', 'TIPIN', 'RPRM', 'PPM1N', 'TGFA', 'RALGAPA2', 'LAPTM4A', 'OR52J3', 'MTCH1', 'ARMCX3', 'ZMYM4', 'CHST5', 'BBS9', 'POU6F2', 'ATP5B', 'CD37', 'SEMA7A', 'UXT.AS1', 'PPP1R2P3', 'ZFP1', 'ZNF131', 'MUCL1', 'OR51D1', 'PI4K2B', 'MRRF', 'FIGNL2', 'SLC26A6', 'LOC100130691', 'SNORD116.20', 'ORC3', 'LGMN', 'HDAC11', 'SNORA70C', 'ZC3H12D', 'CD226', 'BCL3', 'KIR2DS4', 'VNN1', 'C19ORF53', 'FAM101B', 'C11ORF63', 'PRR15', 'PACS1', 'IZUMO1R', 'DPY19L3', 'USH1C', 'SMIM10', 'PITX3', 'KIAA1033', 'UNC79', 'RAET1G', 'SPOP', 'EPHX3', 'DNM2', 'MORN5', 'ZNF396', 'WDHD1', 'GTPBP2', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 0.8775769260561993 Spearman Correlation: 0.8316128978889308 Coefficient of Determination: 0.7701266192716131 RMSE: 0.2183047960097193 NRMSE: 0.058471888579006114 MAPE: 292.84683637425525 Pearson Correlation: 0.010701883769298752 Spearman Correlation: 0.09039129157075734 Coefficient of Determination: -9.35811870745143e+21 RMSE: 39602681596.35296 NRMSE: 13042213599.984507 MAPE: 36258126686757.125 Predictor: ElasticNet Pearson Correlation: 0.5709894117386809 Spearman Correlation: 0.5417131985160721 Coefficient of Determination: 0.29680699654749587 RMSE: 0.38181783079040055 NRMSE: 0.10226806770869173 MAPE: 322.6451180673232 Pearson Correlation: 0.3918212195745514 Spearman Correlation: 0.3480733586967125 Coefficient of Determination: 0.14080668154115983 RMSE: 0.3794685297846663 NRMSE: 0.12496905311531903 MAPE: 3029.5315056575273 Predictor: RandomForests Pearson Correlation: 0.46375225052985775 Spearman Correlation: 0.47205474356402544 Coefficient of Determination: 0.2085258553986572 RMSE: 0.4050767356804767 NRMSE: 0.10849785340310077 MAPE: 438.68066284879086 Pearson Correlation: 0.37440267441325004 Spearman Correlation: 0.38288262472302476 Coefficient of Determination: 0.12698273261944137 RMSE: 0.3825090686222553 NRMSE: 0.12597038321167636 MAPE: 2171.3151832588023 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['FCGBP', 'ALOX12P2', 'ANXA9', 'IL1RL2', 'CRAMP1L', 'CENPB', 'HOXA9', 'NKD1', 'MAGOH', 'XIRP2', 'NKAIN4', 'ATG4C', 'FBLN7', 'OR2M4', 'CALCOCO2', 'PSAT1', 'MYLK2', 'MPV17L', 'CDK1', 'CLK4', 'OR4M1', 'RASGEF1B', 'NRXN1', 'MAP2K1', 'WBP1', 'FERMT2', 'VPRBP', 'A2M.AS1', 'GDF6', 'PLEKHH1', 'PWWP2A', 'DOK1', 'GJB2', 'JAKMIP1', 'ZNF678', 'SLC35G3', 'MAGEA12', 'OLFM3', 'OR4K15', 'PIGR', 'MVP', 'NR2E3', 'FSTL1', 'ZNF341', 'CD5L', 'CASC8', 'TRNT1', 'RTP2', 'FCER2', 'OR6V1', 'OR52W1', 'LHPP', 'PTK6', 'LRRC25', 'MYO1C', 'SNHG5', 'RBM15B', 'CCDC185', 'SNORD113.6', 'PFKFB4', 'RPP25L', 'CHI3L2', 'UCN2', 'DEFB114', 'TEKT4', 'BMP6', 'MRPL52', 'ELOVL1', 'TTC7B', 'SACM1L', 'DMRT1', 'ALG9', 'SNORD6', 'SLC30A8', 'SOX18', 'EVA1B', 'PLK5', 'SMIM20', 'ZNF778', 'UBE2M', 'METTL21B', 'ANP32AP1', 'SRFBP1', 'RAB38', 'CTNNA1', 'ARMC1', 'PNLDC1', 'LRP2', 'FJX1', 'NME1', 'GCSAML.AS1', 'NDUFA7', 'TEAD3', 'PRICKLE4', 'ARID2', 'TMPRSS13', 'H2BFWT', 'FYB', 'C16ORF91', 'FAM106CP', 'RSPH14', 'FRMD1', 'TMPRSS11D', 'KCNF1', 'SNORD79', 'BST2', 'FUT2', 'PNPLA1', 'ACBD7', 'LINC00893', 'FAM92A1P2', 'TMEFF1', 'LINC00592', 'AARS2', 'MAGEB3', 'SULF2', 'OPN3', 'FAM95B1', 'GTPBP8', 'ACOT13', 'ITGAX', 'TMEM170B', 'SLC39A3', 'FAM195A', 'ITPR2', 'UPP1', 'HSPB11', 'LOC441666', 'USP48', 'GPHN', 'HGFAC', 'CCDC73', 'RHOA', 'USP42', 'TMEM217', 'NAGLU', 'DNAJC25.GNG10', 'L2HGDH', 'PGGT1B', 'BDH1', 'CHAF1A', 'ZNF382', 'STX17', 'FRMD6', 'AFAP1.AS1', 'LDLRAD3', 'SMARCA5', 'MPHOSPH9', 'AIP', 'RGS16', 'SLC11A1', 'MYH10', 'ZYX', 'PARP15', 'DENR', 'CSNK2A3', 'PNISR', 'DOK2', 'LINC01547', 'AADACL3', 'SLC35A1', 'CHAC2', 'ZNF334', 'RDH5', 'TIMD4', 'SIPA1L3', 'SH3BP2', 'THOC5', 'CCL18', 'TXNDC9', 'SLC7A5P1', 'SLC1A6', 'SLC30A7', 'GNAI2', 'ATP6V0D2', 'PPAPDC1B', 'ZNHIT2', 'C21ORF91', 'SLC24A5', 'PEX12', 'AOX1', 'TNNT2', 'SNX17', 'MEA1', 'LGSN', 'FAM47E', 'STOML2', 'RHBDD2', 'APOA2', 'LBR', 'MTRF1L', 'KISS1R', 'SFXN2', 'PRPF4', 'PLEKHD1', 'LRRC45', 'DKK2', 'SLC2A4', 'FAM204A', 'CFHR4', 'TFPT', 'RGPD8', 'DACT2', 'LIN7B', 'OR4N2', 'RPL11', 'NEK4', 'HEATR5A', 'BTF3L4', 'LDOC1', 'LOC388242', 'ACAN', 'MYH3', 'DCDC2', 'TROVE2', 'CRYBA2', 'DGAT2', 'ASIC4', 'CDK19', 'C3ORF84', 'SULT1C3', 'COX7B2', 'IL11', 'GIGYF1', 'EDEM2', 'NCAM1', 'CORO7', 'C17ORF97', 'CNNM4', 'KATNB1', 'NAA20', 'SLC39A11', 'TTC29', 'OR2F2', 'RNF219', 'ZNF653', 'OR2A9P', 'IL13', 'C4ORF50', 'CNTROB', 'PROSER3', 'DSTN', 'TTC39B', 'PAX7', 'AATBC', 'ERCC1', 'TYK2', 'MFRP', 'OR1N1', 'CXORF36', 'PBXIP1', 'PHYHIP', 'SLC15A2', 'HCG18', 'ZNF813', 'ITGB7', 'IL1RAPL2', 'CPTP', 'NAT16', 'LSM3', 'RPL3L', 'SOX3', 'RAB22A', 'MSGN1', 'ENG', 'IPW', 'FMO1', 'FBXL22', 'TNFAIP8L2', 'NLRP1', 'TCL1A', 'DPP9', 'LRFN1', 'DEGS1', 'FIGF', 'TMPRSS11B', 'SPDYE5', 'CBX4', 'IHH', 'ARCN1', 'RNF141', 'DACT3', 'CNGB3', 'API5', 'AJUBA', 'ZNF626', 'DNASE1L3', 'SLC25A18', 'FSCB', 'ASB13', 'GOLGA2P6', 'PDIA5', 'SLC2A13', 'SPATA45', 'REPS2', 'BCL11A', 'EPHA5', 'PSG6', 'CXORF40A', 'PRDM12', 'XKR4', 'SNRPF', 'SLC6A17', 'UPRT', 'METAP1D', 'CCKAR', 'DZIP1L', 'PCDHB5', 'HPCAL4', 'FREM1', 'TSPYL4', 'HSPB7', 'PITRM1', 'NUDT18', 'CLEC2D', 'ACACA', 'ZNF213', 'SNORD19B', 'C1GALT1', 'SFR1', 'DHX37', 'EWSR1', 'PTGES2.AS1', 'RPE', 'TRIM28', 'MAP6', 'GDPD5', 'TRIM37', 'EFR3B', 'SCLT1', 'ACTBL2', 'PCBD2', 'C4ORF22', 'TLR8', 'PAX4', 'PRKD3', 'PTP4A2', 'ZNF611', 'C1ORF100', 'PROS1', 'WISP2', 'PRRC2C', 'FBXO44', 'MRPL46', 'NME1.NME2', 'ELL3', 'STRAP', 'AKR7A3', 'NBPF9', 'TBC1D5', 'NPS', 'CD40', 'TNFRSF14', 'CHD4', 'NT5DC3', 'P2RY12', 'CDK17', 'ST3GAL1', 'ARHGEF19', 'DPH3P1', 'GOLGA2P7', 'NBPF22P', 'AADAT', 'GDE1', 'RAB3C', 'UBQLNL', 'TAS2R19', 'PPP2R1B', 'CADM3', 'MOSPD1', 'SIX1', 'LCMT1', 'INTS4P2', 'PDE1B', 'SMPDL3B', 'PDZRN3', 'FBXO48', 'RPUSD2', 'MAP4', 'SLX4', 'LIN28B', 'PCDHB2', 'MAGEB2', 'SLCO6A1', 'FOXC2', 'ZDHHC21', 'ZCCHC12', 'OR2A2', 'TRIM35', 'PARK2', 'DPH1', 'OR5W2', 'PRAMEF10', 'ESPNL', 'HIST2H2BF', 'EDEM3', 'TPPP3', 'PLA2G2F', 'COL6A4P2', 'ETAA1', 'F3', 'ZNF677', 'TRIM17', 'ABCF1', 'SVIP', 'RAB9B', 'POLR1B', 'TIMM9', 'TEX14', 'APOA1', 'C17ORF75', 'MCM7', 'ECI2', 'TRAF3IP2', 'GJA9', 'OSTN', 'FRMD4B', 'R3HDML', 'EEF1E1', 'OR52B6', 'FAM162B', 'RBM34', 'MMD2', 'HEATR4', 'FOXA2', 'KRTAP5.4', 'ZBTB22', 'SERTAD4', 'TBP', 'JHDM1D.AS1', 'SLAIN2', 'SRSF2', 'PPP6R3', 'PRMT2', 'TMEM155', 'AGAP11', 'SMAD9', 'DKFZP434J0226', 'RAX', 'FAM160B2', 'INSL3', 'GPR173', 'CRBN', 'SFMBT1', 'MCPH1', 'TPM3', 'MMP13', 'C11ORF96', 'OR51G1', 'OR13C4', 'ATF7IP', 'HIST2H2BA', 'C16ORF82', 'HMG20B', 'SPA17', 'OTUD6B', 'OR8G2', 'PSKH1', 'UNC119', 'RAB11FIP5', 'KLF3.AS1', 'CHMP1B', 'RAB8A', 'SVIL', 'ART5', 'HILS1', 'SMAD5.AS1', 'DGKQ', 'OR5B12', 'RSRP1', 'STRC', 'GTF2H4', 'ASF1B', 'LIPM', 'PHKB', 'MGC2889', 'LMX1A', 'INTS7', 'IMMT', 'DLD', 'LANCL2', 'C11ORF52', 'C1ORF68', 'TM2D3', 'RHPN2', 'ADAT3', 'PIK3C2B', 'OPN1SW', 'C7ORF72', 'BASP1', 'ZNF184', 'BTN2A1', 'ARF4', 'ZNF667', 'PAIP1', 'SDR42E1', 'CCDC103', 'MCTP2', 'IFT57', 'TTLL2', 'FAM200A', 'FBXL14', 'DDHD2', 'RAP1GAP2', 'RREB1', 'PCDHB8', 'PDRG1', 'USP53', 'DUSP21', 'VRK3', 'FAM136A', 'CSK', 'LBP', 'AKR1D1', 'ARL6', 'SNORD116.29', 'FTLP10', 'MRPL38', 'C1ORF61', 'TXLNGY', 'ORC1', 'PRSS30P', 'SLC8B1', 'METTL7A', 'ZC3H12D', 'SNORA55', 'SPNS1', 'CYP4F22', 'LPCAT4', 'C20ORF27', 'PNO1', 'RNF182', 'FAM217A', 'NUP37', 'XPC', 'RHOH', 'DPYSL5', 'URB1.AS1', 'TMEM154', 'C6ORF15', 'EVA1A', 'SRPR', 'TIMM13', 'CLEC4M', 'OR51V1', 'HNMT', 'LINC00160', 'TPD52', 'OR5M8', 'TBL2', 'PTGDR', 'EMILIN2', 'CCDC54', 'ZNF426', 'PHF5A', 'C5ORF64', 'DPRXP4', 'FLRT1', 'ANKMY2', 'TPTE2P3', 'SNORA70C', 'DNAJC13', 'LCE1C', 'APOBEC2', 'PCDH7', 'COMP', 'ADIG', 'DENND1C', 'LINC01565', 'MINPP1', 'CDKN2B', 'IDNK', 'DTNA', 'SLITRK1', 'PRKRIR', 'MED1', 'EVI5', 'GLP2R', 'C2CD2L', 'F2RL1', 'GSTZ1', 'GPR82', 'SLIT3', 'STK26', 'ATAD5', 'LAMA5', 'OR2T11', 'KIAA1671', 'ST13', 'COX6A2', 'ZNF41', 'GPC4', 'GMPPB', 'METAP2', 'PCYT2', 'SLAMF7', 'CHRNA7', 'POC1A', 'OR2C1', 'GFAP', 'RASA4', 'ASPHD2', 'FIGLA', 'LACC1', 'SUPT7L', 'PTAR1', 'MIXL1', 'FDXR', 'C7ORF73', 'SIGMAR1', 'ATPIF1', 'KIZ', 'OR51M1', 'CCDC102B', 'PPP2R3A', 'SH2D1A', 'RPGR', 'CENPP', 'SLC52A1', 'OR6T1', 'FHL5', 'DEFB135', 'SLC35E3', 'KRT6C', 'MYO5C', 'RBMY1F', 'IRF2BP1', 'PCYOX1', 'C2ORF57', 'SEL1L', 'BAZ1A', 'ADCY8', 'MEPCE', 'PRR14', 'SMAD3', 'HIGD1B', 'RANGRF', 'ZNF511', 'DTNBP1', 'NFKB2', 'MED29', 'SLC6A15', 'BRICD5', 'SLC17A2', 'GSDMD', 'VSX1', 'MMP23B', 'GPIHBP1', 'PLBD2', 'ZNF226', 'CTAGE5', 'CISD2', 'PGLYRP3', 'ACTRT3', 'CAPN5', 'KCNK2', 'TNFRSF4', 'HDX', 'CCDC78', 'MRPS23', 'ZAK', 'TNS2', 'TPPP', 'AMD1', 'CXORF56', 'EIF4E3', 'ANGPTL6', 'DUSP6', 'IL18RAP', 'SERPINB8', 'PLBD1', 'BLOC1S3', 'PDE12', 'C10ORF10', 'ANKRD22', 'TMEM156', 'SPRR3', 'CAPN7', 'PANK4', 'GDAP1', 'NCBP1', 'CCL7', 'CAMTA1', 'DUSP15', 'TFAP2B', 'APOPT1', 'NFKBID', 'CEP68', 'CARKD', 'SLC35F3', 'SCN1A', 'SEC61G', 'ETFA', 'PRAMEF16', 'UGT2B15', 'HAUS7', 'GABRB2', 'IRGQ', 'C2CD2', 'CD300E', 'GUSBP5', 'LOC284379', 'TSPO', 'PHOX2B', 'ZNF781', 'METTL21A', 'TRPV5', 'DTYMK', 'LRRC56', 'NMS', 'HOXB5', 'MRPL44', 'SERPINE3', 'RPPH1', 'SNORD25', 'KMT2D', 'SLC16A5', 'SNORD115.7', 'ZNF416', 'SNORA81', 'ATP5D', 'TRAPPC2', 'ZNF578', 'MAPKAPK5.AS1', 'UGT3A2', 'OS9', 'TRPS1', 'ZCCHC7', 'SOX2', 'NCF2', 'BEST2', 'PRG3', 'GPR65', 'ZP2', 'TM6SF1', 'SULT1A1', 'POLR2G', 'OSBPL9', 'DRC7', 'TAS2R46', 'LRRC7', 'PHKA1', 'ARHGAP30', 'HMGN3', 'TIFAB', 'TTF2', 'NFYC.AS1', 'CTBP2', 'RDH11', 'APBA1', 'FZD5', 'PTCD1', 'OR51T1', 'KCNS2', 'KRT82', 'OR1J1', 'PIWIL1', 'PCBP3', 'ABR', 'POLA2', 'PRX', 'EGR4', 'DLEC1', 'MANBA', 'PSEN2', 'CSMD3', 'NEUROD2', 'ZNF777', 'ANO9', 'SLC25A51P1', 'SNORD4A', 'SERPINB4', 'LPPR3', 'MAGEC1', 'TMEM231', 'SLC16A11', 'COPS3', 'NDST2', 'RGMB', 'RAB15', 'LARS', 'THYN1', 'TRIML2', 'THAP10', 'SIRT5', 'IL15RA', 'KIF18A', 'ZNF33A', 'EEF2', 'MAGEL2', 'ZSCAN25', 'KANSL3', 'HGF', 'RTN4', 'FEZF2', 'YWHAQ', 'PSTK', 'HOXB6', 'ZNF322', 'FOXRED2', 'PMS2P4', 'KDM4D', 'ENO2', 'OR4D5', 'ABCA11P', 'SEPT7P2', 'TOR1B', 'UNC5A', 'TMEM119', 'TREML5P', 'FIS1', 'SPINK9', 'CD164L2', 'SLC13A2', 'OR2C3', 'HHATL', 'C8ORF33', 'TMOD2', 'MCOLN1', 'NUGGC', 'ZNHIT6', 'SLC26A8', 'PSMC3', 'TSPAN5', 'SERINC3', 'ALG14', 'SLFNL1', 'MCMBP', 'OR2AK2', 'NAP1L5', 'BIVM', 'LRRC69', 'ZBBX', 'ANO2', 'TCIRG1', 'APBB1', 'CRLF1', 'DSCR3', 'LRRC52', 'ZNF19', 'FOXC1', 'FAM3B', 'MDM2', 'RAC3', 'EFCAB6', 'ATP1B1', 'STAB2', 'SNORD116.23', 'MIIP', 'PAX1', 'ZC3H8', 'TOR3A', 'MVK', 'C8ORF34', 'FMO4', 'RNF39', 'SMUG1', 'FAM138F', 'OR7C2', 'MMP17', 'SDC3', 'IFNK', 'ERICH5', 'CXADRP3', 'C12ORF77', 'PSAP', 'ANXA3', 'SUSD1', 'OCRL', 'P2RY6', 'LCN10', 'IL1RAPL1', 'WIPI2', 'TJAP1', 'TMEM9', 'FAM196B', 'RFFL', 'MORF4L2', 'LRP2BP', 'ITGA8', 'KATNBL1', 'ZDHHC14', 'NOXA1', 'FAM209A', 'C9ORF171', 'CBLN3', 'TPTE', 'SCAND2P', 'LINC00341', 'ASB16', 'MFSD7', 'KLK1', 'RAPGEF2', 'ATRNL1', 'ZDHHC22', 'ICOSLG', 'SATB2.AS1', 'REV1', 'TNPO1', 'ATL2', 'LINC01554', 'UQCRHL', 'SNORA8', 'PAIP2', 'EPHA4', 'ARFGAP1', 'FEN1', 'ALOX5AP', 'CCDC82', 'MOGAT3', 'SIKE1', 'ZNF571', 'ANGPTL3', 'KLHL12', 'C14ORF166', 'PER1', 'CABP7', 'SHB', 'RET', 'MYO1E', 'MTHFD1', 'RB1CC1', 'NLE1', 'CEACAM21', 'KRT17P5', 'FSD1', 'RAPGEFL1', 'TSG101', 'WDR81', 'LRRC61', 'ARL6IP5', 'C5ORF15', 'DUT', 'ERRFI1', 'LINC00661', 'CNOT11', 'POGK', 'SLC6A11', 'MAP1LC3B', 'TRIM49D2', 'ARL14', 'OR2AG2', 'C2CD4C', 'SMARCD3', 'FAM109B', 'G6PC3', 'MSMP', 'OR52E8', 'LOC344967', 'MIEF2', 'CCDC177', 'CTR9', 'FOXJ2', 'SNORA66', 'DNAJC30', 'PSENEN', 'VRK2', 'LYPLAL1', 'GPR17', 'SDK1', 'HSPA1B', 'DEFB110', 'TSG1', 'SUB1', 'SIM2', 'DBX2', 'PRKCA', 'RAB42', 'AGGF1', 'ZFP62', 'RPL23', 'SKAP1', 'FOSL2', 'CYP4V2', 'ZMIZ1.AS1', 'ROGDI', 'LOC388955', 'MGC57346', 'C9ORF50', 'SCARNA9L', 'ZNF430', 'MTMR3', 'TBC1D22B', 'HYAL3', 'OR52A5', 'HLCS', 'ZNF222', 'SLC22A1', 'CHD8', 'NFE2L3P2', 'MAX', 'AVPR1A', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.8812957668204874 Spearman Correlation: 0.8523459608670294 Coefficient of Determination: 0.7359574670258704 RMSE: 0.3725333172787202 NRMSE: 0.07327563282429587 MAPE: 495.13059623961306 Pearson Correlation: -0.06282700395598285 Spearman Correlation: 0.25732000982473635 Coefficient of Determination: -3.6283620598443667e+24 RMSE: 1460114265259.0232 NRMSE: 363384252571.86816 MAPE: 83810342381452.3 Predictor: ElasticNet Pearson Correlation: 0.6335684800306854 Spearman Correlation: 0.6101201891926235 Coefficient of Determination: 0.3660025895646317 RMSE: 0.5772606001132655 NRMSE: 0.11354457122605538 MAPE: 240.42662243354482 Pearson Correlation: 0.41477721424961517 Spearman Correlation: 0.44140083894254223 Coefficient of Determination: 0.08623084362770506 RMSE: 0.7327398020289141 NRMSE: 0.18235977253650087 MAPE: 188.40640948730714 Predictor: RandomForests Pearson Correlation: 0.4557244698810871 Spearman Correlation: 0.4502015552095557 Coefficient of Determination: 0.1685204483051016 RMSE: 0.6610799127884727 NRMSE: 0.13003145412833847 MAPE: 525.3004753662802 Pearson Correlation: 0.4270546201227535 Spearman Correlation: 0.41220856501804704 Coefficient of Determination: 0.025283582627656398 RMSE: 0.756781794648554 NRMSE: 0.18834319570158883 MAPE: 231.5197272800251 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['MOS', 'TTTY5', 'FAM111B', 'ASB1', 'CST13P', 'PLA2G4D', 'KIR2DL4', 'MSANTD2', 'C2ORF69', 'MED21', 'POLR1C', 'TCAF1', 'PHF14', 'GPHN', 'CCDC97', 'BLOC1S3', 'ZNF304', 'USP40', 'TACC1', 'SLAIN2', 'FAM78A', 'PTP4A3', 'SPIRE1', 'MVB12A', 'KMT2B', 'FXYD7', 'TGFBI', 'PDE6D', 'WFDC10B', 'ZUFSP', 'TTF2', 'AMZ2P1', 'ANLN', 'AFF1', 'ZYG11B', 'TBCEL', 'LOC645752', 'LINC01566', 'HS3ST1', 'DNAJC1', 'PROKR2', 'WFDC5', 'GOLPH3L', 'VENTXP7', 'OGT', 'SKA3', 'OGFOD3', 'CAGE1', 'PRSS16', 'IRF9', 'LINC00606', 'AFAP1.AS1', 'FRAS1', 'PLEKHN1', 'UBE2E2', 'ARL15', 'LRRC71', 'ZNF398', 'GPR32', 'MFF', 'LTK', 'FTH1P3', 'FN3K', 'SLC34A1', 'TAS2R60', 'CFTR', 'HERC5', 'SH3BP5L', 'ENTPD7', 'MPLKIP', 'FBXL8', 'FAM45A', 'MAPT.IT1', 'VWA1', 'GPR19', 'STK32C', 'NR5A2', 'SULT1E1', 'PMM1', 'CCDC64', 'MAPK10', 'MBD3', 'CTXN2', 'PDZD4', 'CDC123', 'SPATA32', 'GABRB1', 'SLC7A13', 'ARHGEF11', 'LGALS13', 'FGF12', 'P4HTM', 'ZGRF1', 'DKK1', 'SNORD53', 'UQCC2', 'ANKRD29', 'ARPC2', 'MT1IP', 'DHRS2', 'LPP', 'ADIPOR2', 'SLC2A8', 'LOC115110', 'POF1B', 'ZNF184', 'SLC23A3', 'PRSS30P', 'CCDC106', 'LIN9', 'VRK2', 'HMG20A', 'VAPB', 'DNAJC2', 'GTPBP6', 'PAGE2B', 'TOP3B', 'FUT2', 'GRXCR2', 'SNORA46', 'MYL6B', 'PINK1', 'MAGEA12', 'FAM21C', 'KMT2A', 'GPR183', 'NBL1', 'PCDHAC2', 'OR2T2', 'POMZP3', 'CXORF57', 'CLN6', 'NLRX1', 'NFKBIZ', 'NOMO3', 'CACNG6', 'TRIM74', 'SIDT2', 'UBL3', 'HRH1', 'MSTN', 'NEK7', 'ADCY7', 'CDH15', 'CRELD1', 'SMIM12', 'FAM208B', 'UNC93A', 'MYBPHL', 'TMEM130', 'OSBPL11', 'RAB11FIP2', 'PPIE', 'NOP58', 'CYSLTR2', 'CPA2', 'GPAA1', 'KIAA1257', 'KLK3', 'ACOX2', 'OR4C45', 'PRAP1', 'PAOX', 'STK10', 'CT45A2', 'HMCN1', 'LENG8', 'ADD2', 'NCOR2', 'DHX15', 'OR2F2', 'ACOT7', 'REEP2', 'XPO5', 'EVI2A', 'PKIB', 'LOC441666', 'MAP1A', 'ZNF397', 'C2ORF15', 'COQ4', 'VAX2', 'ANXA10', 'TUBB8', 'C8ORF82', 'CHRAC1', 'POM121L10P', 'C2CD4C', 'RNASEH2A', 'IFNA7', 'DDX1', 'SAPCD2', 'PAX5', 'CSDC2', 'SUPT4H1', 'KCNH2', 'CYP4F30P', 'ADAMTS16', 'PTK7', 'RALGPS2', 'GATC', 'C20ORF202', 'TATDN2', 'TIAM1', 'MPZ', 'LINC00899', 'HRASLS2', 'FAM83B', 'LGALS8', 'LINC00482', 'SCHIP1', 'TDGF1', 'E2F2', 'LAP3', 'UBE2Q2', 'VANGL2', 'IFNK', 'FAM167A.AS1', 'C2CD2L', 'COMTD1', 'REC114', 'PAQR4', 'DCAF15', 'KRTAP19.7', 'TMED2', 'ZNF524', 'ANK2', 'TMEM168', 'CNTNAP2', 'CWC25', 'SBDSP1', 'GJA5', 'PGA3', 'IMPDH2', 'KIAA1467', 'MPZL1', 'NLRP12', 'PIDD1', 'CATSPERG', 'NDUFA3', 'ZNF688', 'INSM2', 'ABCA8', 'CHCHD2', 'MARCKS', 'CACTIN', 'ZMAT1', 'MEPCE', 'IL13RA1', 'SNORD15A', 'SRFBP1', 'EIF1AD', 'RANBP6', 'TRIM17', 'METTL5', 'UG0898H09', 'ACTR10', 'CXADRP3', 'ZNF19', 'RBMXL3', 'PKD1L3', 'ZAR1L', 'OR5M3', 'XPR1', 'NAP1L5', 'SNORD62A', 'PROP1', 'SLC35B3', 'NEO1', 'OR5AC2', 'VPS41', 'IL1RAP', 'ELP4', 'SERINC4', 'PCDHGB4', 'CKB', 'FBXO2', 'TERF2', 'WDR31', 'SGK223', 'DCAF12L2', 'LY86', 'ERICH1', 'ERICH4', 'BRWD3', 'HECTD2', 'ZP3', 'ABCA1', 'B2M', 'PIK3C2A', 'ADRA1D', 'LCE1C', 'SGCE', 'PCNP', 'TRAF2', 'AP2M1', 'RAB11FIP5', 'MYO1B', 'METTL21C', 'ELOVL3', 'RBM33', 'GPATCH2L', 'NKX2.1', 'MYRF', 'RMI2', 'NAB2', 'ENTPD2', 'LRRN1', 'GKN1', 'ADGRD1', 'TNRC6B', 'PRO0611', 'NRXN2', 'ZNF614', 'PHLDB3', 'C2ORF78', 'PRR23C', 'SAXO1', 'ASAP1.IT1', 'C11ORF70', 'LAMP3', 'FAM9B', 'SLC17A9', 'NCR2', 'RGL2', 'SNORD73A', 'ATP4B', 'ATP2A3', 'NAT10', 'OSBPL10', 'SEC11A', 'MRVI1', 'HCFC1', 'SHARPIN', 'PIEZO2', 'TMEM244', 'SFTA3', 'KLHL28', 'ITGAE', 'SPPL2B', 'OR1C1', 'PTPRE', 'CDH10', 'SNCAIP', 'HIC1', 'PLG', 'SH2D3A', 'CASP4', 'SON', 'WRB', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.458408712965838 Spearman Correlation: 0.3772632276147361 Coefficient of Determination: -2.708597488160666 RMSE: 0.9875298407078196 NRMSE: 0.23832078594198894 MAPE: 215.7100338766611 Pearson Correlation: 0.029127764162685428 Spearman Correlation: 0.48599267272245195 Coefficient of Determination: -2.2165313996024374e+24 RMSE: 622726163680.9603 NRMSE: 338439971782.9773 MAPE: 11171130894747.145 Predictor: ElasticNet Pearson Correlation: 0.6184322816399282 Spearman Correlation: 0.5316562939994174 Coefficient of Determination: 0.3607211799571124 RMSE: 0.41000630560874457 NRMSE: 0.09894690870689109 MAPE: 87.53606452219783 Pearson Correlation: 0.6302197243995393 Spearman Correlation: 0.5370597990439958 Coefficient of Determination: 0.38593082932404255 RMSE: 0.32776970934169986 NRMSE: 0.17813667973287892 MAPE: 57.598225413975676 Predictor: RandomForests Pearson Correlation: 0.5602102257864632 Spearman Correlation: 0.43406854575618325 Coefficient of Determination: 0.27142880866163965 RMSE: 0.437704866500732 NRMSE: 0.10563140828262953 MAPE: 101.44291980216535 Pearson Correlation: 0.5858844233058556 Spearman Correlation: 0.5132499673492021 Coefficient of Determination: 0.3299555705800037 RMSE: 0.34238282373733486 NRMSE: 0.18607863289329557 MAPE: 63.16942241184974 Protein: CCND1 x_train_column_count: 859 x_train columns: ['SNORD88A', 'HSD11B1', 'SDC4P', 'IFNA17', 'LINC00461', 'HCN3', 'GORAB', 'RUFY3', 'HLA.H', 'CLK4', 'GFI1', 'ZNF85', 'KCNK4', 'TNPO2', 'ARHGDIA', 'ZBTB21', 'OR4F15', 'RYR2', 'KHDC1', 'ZSWIM5', 'RIPK3', 'IFT46', 'FAM212A', 'ASZ1', 'LRRC28', 'ZC2HC1C', 'RNF185', 'C1ORF177', 'SMIM4', 'FKBP3', 'POLR3B', 'MACF1', 'LOC400736', 'NRSN2', 'ZNF182', 'PCID2', 'KDSR', 'DNAJC12', 'USP20', 'CENPL', 'BNIP3', 'WWP1', 'NMUR1', 'SLC35A4', 'GRXCR2', 'COL13A1', 'ADI1', 'TTYH1', 'CEACAM22P', 'ZNF136', 'C5ORF56', 'MRPL52', 'ZNF578', 'PDAP1', 'IRAK2', 'SQLE', 'THEM4', 'UTP15', 'RPS28', 'NSUN6', 'SAA4', 'CALN1', 'ASB6', 'TNN', 'FAM95B1', 'PHLDB2', 'KCNH2', 'PCYOX1', 'ATXN1', 'C2ORF27A', 'UMODL1', 'IZUMO1', 'ANKRD30A', 'OGFOD3', 'SERPINB7', 'DDX23', 'TRMT10C', 'ARHGAP19', 'SLC28A3', 'ANKRD19P', 'GINS4', 'EXTL1', 'LRRC19', 'CCDC53', 'PARP4', 'BSND', 'PSMB5', 'POPDC2', 'TMEM109', 'PFN1P2', 'MRM1', 'GRAMD4', 'ADARB1', 'SPHKAP', 'BICD1', 'MEOX1', 'PWP1', 'ERGIC2', 'LCMT2', 'SLCO1B3', 'RNF17', 'N4BP2L2.IT2', 'PANX1', 'ACTA2', 'PLGLB2', 'TMEM219', 'CEP162', 'UBQLN4', 'LUC7L3', 'LINC00239', 'SHOX', 'UBAP2L', 'B9D2', 'RTN4IP1', 'SNTB1', 'SNORD55', 'TGM2', 'GPER1', 'NPFFR1', 'HYLS1', 'SLC51B', 'F12', 'ATXN3', 'CSRP2', 'NDUFAF3', 'SLC5A7', 'AMHR2', 'GFRA4', 'AOC4P', 'ATCAY', 'KRTAP19.3', 'PRX', 'WDSUB1', 'ISL2', 'JTB', 'DDTL', 'PM20D2', 'SIRPB2', 'SEMA3C', 'ESYT1', 'ZNF793', 'GFRAL', 'MAP3K10', 'EVX2', 'SLC38A10', 'COG1', 'FRMPD2B', 'POLR2A', 'ZNF528', 'ARL10', 'SNURF', 'TMEM127', 'FAM192A', 'HIST2H4A', 'SUGP1', 'ZIC1', 'RALB', 'GPA33', 'PRR26', 'LTBP4', 'LINC01001', 'LINC00887', 'DPM2', 'ZNF556', 'SPRY3', 'SLAMF1', 'IFI30', 'MGEA5', 'RAD51AP1', 'EBI3', 'IQSEC3', 'SLC38A4', 'SCARNA9', 'ANKS1A', 'TAS2R1', 'EFCAB8', 'CDS2', 'XAB2', 'TUBB2A', 'RNF214', 'XIRP1', 'TEX14', 'DISP2', 'FAM117A', 'NIPAL1', 'EPX', 'MEF2BNB.MEF2B', 'PTDSS1', 'SLC5A4', 'TTLL6', 'DKFZP434H168', 'CCNE1', 'HBA2', 'A2M', 'C19ORF52', 'HPRT1', 'CD209', 'S100A13', 'TGIF2LY', 'GAS2L2', 'TTC13', 'URB1.AS1', 'TAGLN2', 'RASL12', 'CFAP52', 'ZMYND8', 'PLEKHA5', 'ARHGAP26', 'LINC00152', 'CRYGD', 'STK24', 'TMEM229B', 'NLGN4X', 'LOH12CR1', 'CAND1', 'PPP1CC', 'DNAAF3', 'DNAJC3', 'PTRF', 'C15ORF56', 'CYP46A1', 'RGS20', 'STK26', 'TOMM40', 'MAPKBP1', 'BMF', 'INTS4P2', 'FRMPD1', 'TBCCD1', 'ZNF33B', 'PSMA7', 'TRIM25', 'PPWD1', 'SNORD116.1', 'SOCS7', 'SNAR.H', 'VPS13C', 'KIF13A', 'KIN', 'WAS', 'ITPRIP', 'MCUR1', 'NAGLU', 'GPAA1', 'LSM5', 'H2BFWT', 'FOXS1', 'KRTAP1.1', 'USP39', 'TTC5', 'IMP4', 'RNF31', 'IL27', 'RBL1', 'C9ORF43', 'ZIC3', 'RBM15B', 'QSOX2', 'CD24', 'SCN5A', 'RCN2', 'SPATA7', 'SEC24A', 'TAPT1', 'EMILIN2', 'SNORD116.11', 'SNORD116.27', 'FBXO31', 'ACVR1C', 'TMEM184B', 'ASH1L', 'SLC17A7', 'GDE1', 'CUL7', 'IFNL1', 'VN1R1', 'ABT1', 'IGLL1', 'DDX11', 'ACBD5', 'TMEM60', 'METTL7B', 'TIMM10', 'BRPF1', 'MMP15', 'CNR2', 'MAP7D2', 'SNRNP40', 'ARMC8', 'IFNA8', 'PLIN5', 'PCDHGB5', 'GAD1', 'JADE2', 'PRDM2', 'TRMT2B', 'FAM13C', 'CANX', 'MYLPF', 'FAM150A', 'STX16', 'OR52E2', 'CCDC54', 'MGMT', 'CYLC1', 'GJC3', 'TSC2', 'POU1F1', 'OR4D5', 'CYHR1', 'SLC9A4', 'DBIL5P', 'FBLN7', 'NTN4', 'LDHAL6B', 'CCDC40', 'CCL2', 'SNORD77', 'INE1', 'ATP1A1.AS1', 'CP', 'NUAK1', 'GPR161', 'F2R', 'UBXN6', 'GYPA', 'IFNA16', 'SMYD1', 'SNORD126', 'SRBD1', 'TFCP2L1', 'ALG11', 'MFSD6L', 'AK8', 'VSIG10L', 'SCARNA15', 'CRYGS', 'IGSF9B', 'CCNH', 'EPB41L4A.AS1', 'LINC00303', 'ABCB6', 'CEP104', 'TMEM199', 'TMEM141', 'CDH20', 'RXRG', 'USP6NL', 'LILRB2', 'WDR90', 'GPRASP1', 'NUP107', 'TOLLIP', 'CTDSP2', 'SPRR2F', 'CGB2', 'CPN1', 'SF3B5', 'DOC2A', 'ATP7B', 'RBM4B', 'XRN2', 'RPA3', 'LPPR1', 'CWH43', 'NAA40', 'MMS22L', 'LRRC6', 'PWP2', 'TMUB2', 'OR9Q1', 'RELB', 'KIF14', 'ZSCAN18', 'UVSSA', 'SPINT3', 'CDH11', 'SPAG5', 'H1FX', 'RPN2', 'PIK3R2', 'COA4', 'CHM', 'KLF1', 'RAMP2.AS1', 'ITFG1', 'CLSPN', 'CHODL', 'NACAD', 'CDS1', 'TLR2', 'DANCR', 'TTC14', 'MIXL1', 'C3ORF35', 'ZSCAN12', 'WIPF1', 'KIAA1804', 'KCNQ1OT1', 'SNAP25', 'LLGL2', 'TMEM121', 'SORBS3', 'SUPT20H', 'C12ORF75', 'SIX1', 'SNORA81', 'ADAD1', 'SLC11A2', 'SYTL1', 'SFTPB', 'SCNN1A', 'MRPS22', 'GNB2', 'RAB37', 'KLHL15', 'SAMD8', 'CDH22', 'GTPBP2', 'DDX12P', 'AMZ1', 'CECR5', 'IPO4', 'DZIP1L', 'CRISPLD1', 'ALDH3B2', 'CATSPER1', 'ZNF287', 'LRCH3', 'C17ORF102', 'PDE4DIP', 'DAP', 'SNORD116.12', 'ARSD', 'CITED1', 'SORBS1', 'PROC', 'PRRG4', 'DAB2', 'HNRNPA1P33', 'GOLGA6L6', 'KLKP1', 'COL20A1', 'HIST1H3J', 'GP2', 'MRE11A', 'GSTM2', 'SNRNP70', 'AGAP4', 'PABPC1L2B', 'HNF4G', 'ZSCAN31', 'BCL10', 'BPIFB2', 'C7ORF61', 'RADIL', 'PDE6G', 'RFPL3S', 'LINC00634', 'FOXI3', 'SERP2', 'KCNT1', 'NAPRT', 'TMLHE', 'IFIT5', 'GNPNAT1', 'C7', 'NUDCD3', 'CTAGE6', 'PIGQ', 'RPL3L', 'NAALADL1', 'COX17', 'NSA2', 'CCRL2', 'PRSS3P2', 'SNORD71', 'CDC42BPB', 'DNAH5', 'SQRDL', 'SOAT1', 'KLF4', 'PPP1R3A', 'SYNC', 'INTS4P1', 'IL10', 'ABHD3', 'RNF13', 'GAL3ST1', 'FAM201A', 'FBF1', 'NCKAP1L', 'SNORA71A', 'LCN8', 'IGFBP4', 'SNAR.C3', 'LARP6', 'ZNF416', 'RENBP', 'IBSP', 'TMEM179B', 'DIXDC1', 'UNC5B', 'DTX2', 'RPRD1A', 'IFITM5', 'C1ORF123', 'TACC2', 'TXNDC12', 'PSD2', 'STARD5', 'MTOR', 'WBP4', 'ANKS6', 'HYI', 'LOC100128573', 'ZBTB25', 'SIRPG', 'MESTIT1', 'SUPT5H', 'YLPM1', 'NKAPP1', 'TUBE1', 'CCHCR1', 'ANKRD10', 'PAX9', 'HMMR', 'RHOBTB1', 'CLK1', 'LOC284023', 'LINC00597', 'PIGY', 'ARHGAP33', 'EIF4A1', 'KRT80', 'OR4F6', 'HIRIP3', 'DIRAS2', 'MTTP', 'LIPT1', 'ABCC1', 'THOC6', 'TAMM41', 'CDC42SE1', 'RAB1A', 'HOXB7', 'OIP5', 'DGAT2', 'LY6G5C', 'LILRA5', 'PI4KB', 'MMRN1', 'PCDHA13', 'ATF3', 'DYRK2', 'DLEC1', 'PSG11', 'AGAP2', 'RAB3C', 'C8ORF22', 'FNDC5', 'HIST1H3I', 'HPCA', 'OR14J1', 'SNORD4A', 'LSR', 'SDHAF1', 'ZNF177', 'CAPS2', 'SNORD90', 'SPTSSA', 'RSBN1L', 'STOML1', 'CANT1', 'FOS', 'OR8J3', 'PCDH18', 'PAXIP1.AS2', 'OLFM1', 'DOK6', 'CYTH4', 'CTRB2', 'ADGRF1', 'CCDC96', 'LIMD2', 'GNAI2', 'COMMD2', 'NUDT8', 'OR5A1', 'OR6C4', 'OSGIN1', 'PTGR1', 'HOMER2', 'MAGEB10', 'HTR2C', 'HIP1R', 'ANGPTL1', 'TMEM89', 'HCG9', 'GOSR2', 'SLC13A1', 'ZNF804B', 'OSBPL8', 'ERO1LB', 'SLC17A9', 'DPYSL3', 'OR5K4', 'ARID4A', 'PRADC1', 'ADGRD1', 'MS4A10', 'WBP1', 'GDF15', 'GSG1L', 'NUTM2F', 'THEG', 'CROT', 'ANP32A', 'C11ORF86', 'FAM168B', 'BHLHE22', 'VHL', 'NSUN2', 'SNX17', 'RAB33B', 'SLC10A5', 'ELF1', 'ZNF324B', 'TMEM207', 'POLR3A', 'BIN2', 'TFR2', 'VSIG10', 'CAPN6', 'PCDH1', 'UBE2D1', 'OR4K15', 'INSR', 'ASGR2', 'UCN3', 'OR2Y1', 'SNAPC5', 'METTL5', 'TCHP', 'CCDC88A', 'DHODH', 'FAM83F', 'CPD', 'NAA11', 'CXORF65', 'TXLNGY', 'AKNAD1', 'PQLC3', 'FAM183CP', 'ATXN8OS', 'LINC00593', 'GABRA4', 'NPHS1', 'RBBP6', 'KRT40', 'POMC', 'GAR1', 'CEP41', 'GALNT18', 'ORC3', 'CNOT8', 'GBP3', 'SBNO2', 'PMCHL1', 'KRTAP13.4', 'BSG', 'SRP72', 'HCG4B', 'AGO3', 'ZNF44', 'SUN5', 'ADCY8', 'RAB22A', 'NDC1', 'COLEC11', 'SELENBP1', 'SMAD5.AS1', 'ADPRHL1', 'CCNB1', 'KIF22', 'DNASE1L1', 'SNX32', 'THBS2', 'MSN', 'PPFIA3', 'IER5L', 'HNRNPL', 'RARS', 'CFAP126', 'PTP4A3', 'ZNF653', 'CTPS2', 'C21ORF91', 'KRTAP19.1', 'SUMF1', 'SSPO', 'RNY5', 'PPM1G', 'ISY1', 'BCKDHA', 'MDC1', 'SLC11A1', 'DOK7', 'OR5T3', 'RIT2', 'RNF125', 'ARHGEF39', 'C9ORF40', 'LINC00470', 'KRT1', 'CACNG2', 'EN2', 'NPEPPS', 'PALM2.AKAP2', 'TOM1L2', 'MOXD1', 'SNORD114.4', 'CACTIN', 'PACRG', 'TCTE1', 'CYFIP1', 'SPESP1', 'SLC25A42', 'MYL10', 'SH3RF1', 'CLDN25', 'PRR7', 'RBM11', 'TCEAL6', 'LAIR1', 'GAB1', 'VN1R2', 'MAP6', 'SOX30', 'RAB5B', 'SNORD116.24', 'ACADL', 'CHI3L1', 'DBF4B', 'TEN1', 'BMP15', 'BIN1', 'SNORD80', 'LINC00202.1', 'PRPF18', 'KLF7', 'MAPK10', 'VEPH1', 'SNAR.G2', 'VTI1A', 'NTAN1', 'ADRA2B', 'ZNF492', 'WDR35', 'PLAUR', 'ARHGEF5', 'RAET1G', 'PCGF1', 'ATAT1', 'ZNF879', 'PSKH1', 'SNORD38A', 'AP3M1', 'MLXIP', 'INSRR', 'GRM3', 'MGAT4A', 'KHDC1L', 'BDP1', 'LOC646762', 'LRGUK', 'ESRP2', 'GPX6', 'LGALS3BP', 'MKKS', 'APOF', 'GOLT1A', 'KCTD2', 'CEP57', 'TRIM42', 'SLC25A51P1', 'ADAMTS10', 'FAM171A2', 'OR4K1', 'IGFBP6', 'EID2B', 'MBNL1.AS1', 'ATP6V0C', 'PNPLA6', 'LIMK1', 'FBXL15', 'NAGK', 'EPC2', 'RNASE6', 'WDR11', 'EFS', 'DLL1', 'OR2T33', 'PTPRVP', 'BCL7C', 'MYO15A', 'UBFD1', 'CPA1', 'NRP2', 'BPHL', 'C12ORF76', 'C10ORF67', 'PLEKHG1', 'CATSPERB', 'LRFN4', 'IMP3', 'CBLN1', 'P2RY11', 'PRPF38A', 'PRAMEF10', 'RNF4', 'ADAM23', 'TRA2A', 'GREB1', 'DEAF1', 'BNC2', 'BCLAF1', 'ARHGEF40', 'ZBTB40', 'PPBPP1', 'SYNPO2', 'G2E3', 'GPM6A', 'NUPR1L', 'CHD3', 'ERC2.IT1', 'SCARB2', 'ANKEF1', 'RELL2', 'RWDD4', 'FBLN2', 'IKZF3', 'DOCK7', 'HHLA3', 'TRPM7', 'ZNF660', 'CD52', 'TCEAL4', 'TOPORS', 'FZD8', 'PREX2', 'RIMKLA', 'SERTAD1', 'UGT2A3', 'NRXN2', 'SSR3', 'SNHG12', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.8282921827289202 Spearman Correlation: 0.7614093431526421 Coefficient of Determination: 0.6860675377022547 RMSE: 0.13376749397647764 NRMSE: 0.08041714899212324 MAPE: 260.98235285634314 Pearson Correlation: 0.10488687557003955 Spearman Correlation: 0.01919331965181967 Coefficient of Determination: -7.387279182512515e+20 RMSE: 6398871049.685972 NRMSE: 4950540825.714839 MAPE: 608607571515.5063 Predictor: ElasticNet Pearson Correlation: 0.4730169157344399 Spearman Correlation: 0.433701623100682 Coefficient of Determination: 0.15852090905993144 RMSE: 0.21900505659202163 NRMSE: 0.13165950667421436 MAPE: 610.4455204870013 Pearson Correlation: 0.14477726754223494 Spearman Correlation: 0.17561213540142426 Coefficient of Determination: 0.015217767650462788 RMSE: 0.23363139619191664 NRMSE: 0.18075090997084595 MAPE: 412.8770786189781 Predictor: RandomForests Pearson Correlation: 0.5569285679722593 Spearman Correlation: 0.4464693145756104 Coefficient of Determination: 0.1397427698300342 RMSE: 0.22143519221144228 NRMSE: 0.13312043393216524 MAPE: 581.1642927283768 Pearson Correlation: 0.1812743349005739 Spearman Correlation: 0.17508535752609503 Coefficient of Determination: 0.02420148031995628 RMSE: 0.23256329910628754 NRMSE: 0.17992456760714207 MAPE: 412.81434987563694 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['PABPC4L', 'OSR1', 'LRRC2', 'SUSD5', 'UBE2V2', 'SMAD1', 'STK32C', 'CYP19A1', 'MYO18B', 'C10ORF25', 'KCNE5', 'DMXL2', 'MS4A3', 'FAM27C', 'CD200', 'C2ORF49', 'ASGR1', 'CCT3', 'ATMIN', 'RECK', 'TRA2A', 'FAM43B', 'CDC42BPA', 'FUOM', 'TNFRSF17', 'CDH15', 'SPTLC1', 'C9ORF40', 'SYNE1', 'ENG', 'RPS25', 'NQO2', 'SYNM', 'OR10A4', 'SNRNP70', 'THRSP', 'FAM186A', 'CDK15', 'TMEM170B', 'SLFN14', 'EPB41L4A.AS2', 'ALOX5AP', 'IFNGR1', 'CCNB1IP1', 'PIEZO2', 'GSTZ1', 'GDNF', 'SRP9', 'ZNF484', 'JMY', 'RNF115', 'AKAP6', 'RHOU', 'ARMC7', 'LPAR6', 'ANGPTL5', 'ACAN', 'AGAP2.AS1', 'PAXIP1', 'NKAIN2', 'MICALCL', 'FLT3LG', 'MCEMP1', 'BPIFB3', 'AKAP3', 'LIPA', 'EPB41L2', 'EPHB3', 'NCOR1', 'SPA17', 'TAF2', 'ZC3H12D', 'ZNF10', 'ATP6V1C2', 'ERC2', 'SPIN2B', 'RASGEF1A', 'GRIK1.AS1', 'DENND1B', 'PPCDC', 'VPS28', 'TCEB3B', 'MAGEB18', 'ACBD5', 'SNORD115.38', 'TXNDC11', 'NDNF', 'DYNLT3', 'SLC39A2', 'ZNF529', 'SNHG5', 'ZC3H12A', 'SLC26A4.AS1', 'ZEB1', 'LBX1', 'P4HA1', 'ATXN10', 'SGSM2', 'HERPUD2', 'ADORA2B', 'MOS', 'KIAA1429', 'DDX53', 'WSB2', 'LDHA', 'ZNF429', 'OTOA', 'VPS26B', 'GGACT', 'CCDC64', 'DPCD', 'NPS', 'OR6C2', 'LPA', 'TOX2', 'VDAC2', 'FAM27B', 'PPIP5K2', 'CNOT7', 'LGALS3BP', 'CLCA4', 'TTYH3', 'CMA1', 'KLHL12', 'TP53I11', 'TAS2R39', 'BSND', 'TOM1', 'PON2', 'KLRC1', 'DKFZP434A062', 'MSX2P1', 'MFI2', 'TEX26', 'NUP153', 'ZNF273', 'TMEM119', 'ZSCAN4', 'C10ORF128', 'CCL15.CCL14', 'MALAT1', 'MAGI2', 'SLC22A18', 'UTF1', 'GKN2', 'TNFRSF11B', 'TTLL9', 'SNORD114.10', 'LINC00608', 'PEPD', 'CLRN1.AS1', 'CD8B', 'C20ORF24', 'MGAT4C', 'LOC727896', 'LINC00661', 'GTF2A1L', 'PCDHA2', 'BID', 'AOC2', 'ACY1', 'GUCA1C', 'GLI2', 'CDC6', 'C10ORF95', 'ACTA2', 'DCLRE1C', 'MAPK8IP1', 'FGF20', 'ABI2', 'CCDC113', 'HSPA5', 'VPS4A', 'CLEC10A', 'FAM200A', 'SNORD15A', 'ANP32C', 'RXFP4', 'NOVA2', 'SLC7A10', 'HOXA9', 'OR4C16', 'SLITRK5', 'ZSWIM5', 'SNORD116.10', 'LEUTX', 'CDKL4', 'PTPN2', 'LIX1', 'LEFTY1', 'UIMC1', 'ZFAND3', 'RCCD1', 'RPL41', 'TK2', 'ATP6V1D', 'MFSD4', 'ALG10', 'MYCN', 'NDUFV1', 'NFYC.AS1', 'FAM155A', 'PIP5K1A', 'CNTF', 'CFLAR', 'LINC00493', 'ZNF561', 'OR5M1', 'ERN1', 'C14ORF39', 'CADM4', 'ID2', 'LYN', 'EPHX2', 'ATP11C', 'BRPF1', 'USP7', 'PRR15', 'AIF1L', 'APRT', 'ADAM12', 'SLC46A1', 'EHD4', 'GBP7', 'IL13RA1', 'TRIM32', 'ADAMTSL2', 'TMPRSS4', 'ORM1', 'MPPE1', 'CALHM3', 'NID2', 'GPX6', 'UBALD2', 'MYO1F', 'PSMB5', 'CCR7', 'PRMT5', 'GPRASP2', 'COX4I1', 'TPTE2P6', 'OR13C2', 'LRGUK', 'TM9SF2', 'ZCCHC10', 'TNFAIP8L2', 'DDC', 'RAD51D', 'ST8SIA6', 'MAOB', 'GTF2IP1', 'USP18', 'TMEM69', 'CALCA', 'NBEAL1', 'GLA', 'COMP', 'AGAP2', 'HRSP12', 'RBM42', 'PYDC1', 'INCA1', 'CARD11', 'MXD4', 'TARP', 'FUBP1', 'RXFP2', 'NLRP8', 'HIATL2', 'SNAP23', 'FAM225A', 'SMPD3', 'BMP15', 'CENPU', 'TMEM106C', 'CHKA', 'MBTPS2', 'RPIA', 'KANSL2', 'CT83', 'UBE2F', 'BUD13', 'GIPC1', 'SNORD114.27', 'TP53I3', 'PMCHL1', 'TCHHL1', 'IZUMO2', 'TFF1', 'MYLIP', 'MORN2', 'NDUFS5', 'IMMT', 'KAT7', 'RAB11FIP1', 'SLC25A12', 'FAM49A', 'CPSF1', 'GRB2', 'CCDC130', 'TSPAN12', 'GPATCH4', 'C14ORF119', 'KPNA7', 'TTL', 'PLEK', 'PHYHIP', 'ABCB5', 'PACRGL', 'KRT78', 'CST6', 'TSPAN18', 'FLJ36777', 'C9ORF114', 'SORT1', 'DZIP1', 'C4ORF3', 'CCDC167', 'SIX6', 'GVINP1', 'FUT8', 'ABHD16A', 'POSTN', 'PEX11G', 'PDHB', 'CHRNA10', 'ZNF778', 'DNASE2', 'KLK3', 'ACTR3B', 'SCAF4', 'SNORD90', 'OR10A7', 'WDR90', 'SNORD50A', 'AES', 'SNORD65', 'TMTC3', 'DNAJB13', 'GNLY', 'HNRNPA3', 'OR8I2', 'PADI3', 'HSPBAP1', 'TRIOBP', 'KHSRP', 'NAALADL1', 'HNRNPD', 'IL18RAP', 'TIMP2', 'NBEAP1', 'DIMT1', 'ATPIF1', 'KIAA0753', 'TAS2R46', 'OR5B17', 'CCT7', 'TPRG1', 'PARD3', 'CALM2', 'REXO2', 'OR6P1', 'MDM2', 'LINC00160', 'PADI6', 'PCDH8', 'IQCF5', 'ADAM18', 'LPCAT3', 'RABL2B', 'B9D2', 'ATG12', 'RTP1', 'C3ORF33', 'WWOX', 'TPM3P9', 'SYS1', 'NCMAP', 'KIAA1919', 'OR6C76', 'KCNG3', 'CPSF4', 'LOC340017', 'TYMSOS', 'LIN28A', 'OR6M1', 'PIK3C2B', 'GNAQ', 'UBE2I', 'MFSD2B', 'CARD9', 'HMSD', 'CAP2', 'DUSP5', 'ARID5A', 'LINC00052', 'OR6V1', 'PCSK1', 'IL16', 'PAX7', 'RAB3C', 'PRY2', 'LINC00598', 'HSDL1', 'RPL24', 'MRPS12', 'COPS6', 'L3MBTL3', 'FGF7', 'CHCHD6', 'ZNF613', 'TUBA3FP', 'R3HDM4', 'ATP5O', 'ADAMTS7', 'MIR7.3HG', 'SPDYE3', 'PTPN5', 'PARG', 'RQCD1', 'PRMT7', 'CAPN5', 'ZDHHC8P1', 'TXNDC5', 'MIAT', 'PLCB2', 'SLC5A1', 'TMEM123', 'ZNF461', 'WDR18', 'SYNJ1', 'ARL5A', 'GLMN', 'ARGFXP2', 'FMR1', 'TP53INP1', 'NET1', 'PDPK1', 'KHDRBS1', 'ICA1', 'SNAR.H', 'ADAM5', 'MTHFD1L', 'FSTL1', 'BTK', 'OR51I2', 'HES5', 'MEPE', 'SDR16C6P', 'PDGFD', 'ETS1', 'NDRG3', 'RHBDD1', 'SNORD116.13', 'TERF2', 'ODF4', 'PIK3C2G', 'PCGEM1', 'CYB561', 'MRGPRX4', 'DGKA', 'GPATCH2', 'PRG2', 'THBS3', 'DEFA6', 'GFER', 'KRTAP12.4', 'IL4I1', 'PAXIP1.AS2', 'LURAP1L', 'ATP2A1', 'LINC00634', 'CYP27B1', 'PCDH1', 'S1PR4', 'ZNF800', 'PHLDB1', 'LMO2', 'PRAMEF6', 'CCKBR', 'SNORA41', 'MRAP', 'GABRA2', 'MAPT.AS1', 'CSF3', 'CXCL2', 'CFL1P1', 'UGT1A9', 'FAM181B', 'SESN3', 'CIPC', 'UBE2E3', 'SPTAN1', 'ZNF676', 'FBLIM1', 'FAM170B', 'KIAA0586', 'PDE4DIP', 'PRR30', 'C3AR1', 'ZBTB9', 'CFAP57', 'CRIP3', 'LIMCH1', 'KIAA0195', 'CPLX3', 'METTL13', 'GPR65', 'THEG', 'AKR1C8P', 'ACOT9', 'RGPD6', 'SCAF8', 'SFXN2', 'DPP4', 'C12ORF43', 'KPRP', 'IFFO1', 'DNAH3', 'PCID2', 'CAB39L', 'HPN.AS1', 'LYZ', 'CITED4', 'LAMA5', 'MYO6', 'PMEPA1', 'TUBA1A', 'TRIM40', 'BCCIP', 'MED13', 'OMP', 'MEIG1', 'ZNF133', 'SGK494', 'FAM99A', 'CPEB1', 'SCGB1C1', 'GNMT', 'NEUROD4', 'OR10C1', 'PPP1CB', 'CTRB2', 'CLDN5', 'SLC30A9', 'GCN1L1', 'ZNF347', 'PTPRH', 'FAT2', 'EPB41L3', 'WDR72', 'EAF1', 'TNF', 'DCUN1D2', 'TEAD1', 'POLA2', 'MZT2B', 'SLC1A4', 'LSS', 'SNORA61', 'FAM95B1', 'HGS', 'PHGDH', 'KIAA1456', 'ANXA7', 'TRIM60', 'ROBO1', 'KIAA0895', 'PRR20D', 'NAT8L', 'CYFIP1', 'ACER1', 'TAAR2', 'IRX1', 'PSG8', 'TMCO1', 'OR2J2', 'PGM1', 'ABCA4', 'LCE3A', 'FAM92A1', 'RNF7', 'SLC4A11', 'CA7', 'SNORD11', 'P2RX7', 'HIST1H2AL', 'LEPROT', 'SMYD2', 'TAS2R8', 'BICD2', 'ZNF644', 'KRTAP13.4', 'SIN3A', 'BCL2', 'SHC1', 'MAN2B2', 'PUS7', 'TPD52L2', 'ANKRD53', 'CLEC4C', 'CNIH3', 'ROBO4', 'BTBD7', 'GALNT5', 'EFHD1', 'SPAG16', 'NPR2', 'STX4', 'RPN1', 'ZNF295.AS1', 'PCDH11Y', 'USO1', 'SLC22A16', 'RPL35', 'SIRPB2', 'SLC17A8', 'SNORA68', 'CABP5', 'ANXA13', 'DNAJB14', 'PLEKHG4', 'CHRM4', 'ADAMDEC1', 'TAF11', 'OR13C4', 'COL9A3', 'FXYD3', 'CLTA', 'GNGT1', 'RASSF9', 'ASTE1', 'RYK', 'HES1', 'ZXDB', 'OR1A1', 'ZCCHC8', 'TLR2', 'RPL13AP20', 'KRTAP13.2', 'C3ORF22', 'SNORD27', 'CXADR', 'AFG3L2', 'ZNF236', 'C15ORF57', 'RBM41', 'STRADB', 'LINGO3', 'NUB1', 'ZNF350', 'CIB4', 'METTL23', 'CASC8', 'NPY2R', 'ETFB', 'RARA', 'BRCA2', 'SGSH', 'SLC38A5', 'COX10', 'RAB17', 'BEND3P3', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.7970718784628698 Spearman Correlation: 0.6914617551897742 Coefficient of Determination: 0.6059929004782427 RMSE: 0.6170344275122748 NRMSE: 0.11073244934986895 MAPE: 572.8042319879906 Pearson Correlation: 0.1058477722753791 Spearman Correlation: 0.29795207525856193 Coefficient of Determination: -9.026963575941959e+24 RMSE: 3176352234089.5156 NRMSE: 541143880281.7036 MAPE: 156820340693981.75 Predictor: ElasticNet Pearson Correlation: 0.6694221401715201 Spearman Correlation: 0.6175781491483124 Coefficient of Determination: 0.42598820940928717 RMSE: 0.7447624623656852 NRMSE: 0.13365440883758684 MAPE: 324.2718492274439 Pearson Correlation: 0.48079518053445297 Spearman Correlation: 0.4400643839625403 Coefficient of Determination: 0.22856481006495855 RMSE: 0.9285547893642214 NRMSE: 0.15819459075663517 MAPE: 5214.626466841223 Predictor: RandomForests Pearson Correlation: 0.5804040933474421 Spearman Correlation: 0.5525096301925532 Coefficient of Determination: 0.22559612869571277 RMSE: 0.8650498401983204 NRMSE: 0.15524107463674253 MAPE: 337.22735393564204 Pearson Correlation: 0.31371721437160316 Spearman Correlation: 0.32529854569911104 Coefficient of Determination: 0.08555829714943064 RMSE: 1.0109643084019275 NRMSE: 0.17223440864131515 MAPE: 2346.0160808932324 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['UROD', 'PLP1', 'NWD1', 'TMC5', 'MDP1', 'AMELX', 'NSMCE1', 'HIST1H2BD', 'RCVRN', 'KRTAP4.4', 'F13A1', 'G0S2', 'LRRTM4', 'IZUMO1', 'GUCY1A2', 'C1ORF174', 'CHN2', 'SLC2A7', 'MDH1', 'RLTPR', 'GPATCH2L', 'SUSD2', 'CCDC130', 'IL12RB1', 'SUGCT', 'KLHL26', 'LEAP2', 'INTS12', 'PCBD1', 'MAPKAPK3', 'PCDHB15', 'SYCE3', 'ROBO2', 'PAX1', 'FAM83G', 'TRAPPC10', 'BPIFA1', 'YIPF1', 'AEBP2', 'CTPS2', 'NT5DC3', 'CENPBD1P1', 'BTG2', 'TP53I13', 'PCED1B', 'NIF3L1', 'GBA2', 'CFAP20', 'PLA2G16', 'FOXI1', 'DVL3', 'OR52L1', 'LOC100133331', 'SNRNP48', 'PLAC8L1', 'SLC46A3', 'DDRGK1', 'CHML', 'ALG8', 'C7ORF57', 'FAM178B', 'GLRX3', 'CDK1', 'RAD1', 'ATG12', 'KRTAP9.4', 'ATXN10', 'ZNF781', 'ZCCHC24', 'LINC00636', 'ANKRD20A3', 'RAB8A', 'GOPC', 'FASTKD2', 'BRD7P3', 'PPFIA2', 'STOML1', 'PEBP1', 'MED6', 'ARHGEF26', 'RWDD3', 'DEPDC4', 'ERP44', 'SLC22A15', 'LCE1F', 'VHL', 'DHX32', 'TTLL9', 'AGBL4', 'KLHDC7B', 'RPL28', 'PRKAA2', 'KRTAP6.3', 'HNRNPDL', 'FILIP1', 'ZFP82', 'FMO2', 'CMSS1', 'PLA2G6', 'MTFR1', 'SEC24A', 'RNASE10', 'RBBP8', 'AP3M2', 'IRX2', 'FKRP', 'LOC221122', 'FAHD2A', 'MAST4', 'ANAPC2', 'RRP7BP', 'COX7C', 'HS6ST3', 'WIBG', 'CPNE6', 'CA13', 'ZC3H3', 'B4GALNT3', 'BOK', 'ELAC1', 'CELSR3', 'CD8B', 'CACNB3', 'GOLGA8B', 'CT45A6', 'LINC00667', 'AUTS2', 'CDH12', 'TMEM87B', 'BIRC8', 'KCNAB3', 'NR2E3', 'ACOX3', 'USP14', 'NARF', 'RFX6', 'SLFN12', 'TRMT2B', 'ZNHIT3', 'ZNF665', 'SYF2', 'PANK4', 'TMEM147', 'TMEM145', 'ICAM2', 'HRK', 'TMEM2', 'C16ORF78', 'FRG2C', 'BEST1', 'EIF2S3', 'CD27', 'CDKN2A.AS1', 'RAB11FIP4', 'C11ORF87', 'POLR1C', 'RC3H2', 'SYCN', 'TMEM207', 'TUBB4A', 'VSIG2', 'TSC2', 'IL16', 'CHTF18', 'PKNOX1', 'CEACAM22P', 'TLR9', 'ATP6V1E2', 'RALB', 'SLC30A9', 'CDIPT', 'DHRS9', 'GPHB5', 'AFF4', 'SMARCD3', 'FGF3', 'ARHGEF35', 'SGMS1', 'SNX16', 'ATP6V0D1', 'LRRC75A.AS1', 'DHRS7', 'HPCAL4', 'FAM217B', 'ALDH1A3', 'MYO5A', 'MYL3', 'BCORP1', 'RGL3', 'VILL', 'EIF4B', 'FAM185A', 'TMEM126A', 'MOGAT3', 'ZNF843', 'EEF1E1', 'KCNAB2', 'ARL13B', 'KLK5', 'SERPINA9', 'MPLKIP', 'RBX1', 'ULK4', 'RGL2', 'SPIRE2', 'SOD3', 'SNORA45A', 'B3GNTL1', 'SLC4A5', 'SEC16B', 'ECHS1', 'WDR45B', 'SNX1', 'CEP162', 'RXRB', 'PCDHB12', 'BRCC3', 'DMRTC1B', 'PRRT1', 'ZNF157', 'EEFSEC', 'GBP4', 'EEF1A2', 'FBXO3', 'PCNX', 'DUSP6', 'TFRC', 'WFDC6', 'ING1', 'FAM188B', 'LOC728392', 'MSMB', 'EYA3', 'ZMYND10', 'SGK1', 'LHX2', 'TBC1D23', 'VNN2', 'USP6NL', 'SLCO4C1', 'EPB41L1', 'C10ORF71', 'DEFA6', 'TLX2', 'FLJ16779', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.5366840338215904 Spearman Correlation: 0.4945831065129854 Coefficient of Determination: 0.2806591543329102 RMSE: 0.377534991277561 NRMSE: 0.10188585827912816 MAPE: 205.3860104767174 Pearson Correlation: -0.027644759327129703 Spearman Correlation: 0.041386391767396655 Coefficient of Determination: -0.3125631811894596 RMSE: 0.5932006171787932 NRMSE: 0.2189263383680901 MAPE: 326.43263056305096 Predictor: ElasticNet Pearson Correlation: 0.41263824343406774 Spearman Correlation: 0.422927606839966 Coefficient of Determination: 0.14573363965128983 RMSE: 0.41142104376368377 NRMSE: 0.11103073126045651 MAPE: 204.64976482923035 Pearson Correlation: 0.22455271256770773 Spearman Correlation: 0.23395766266705692 Coefficient of Determination: 0.05036352838513658 RMSE: 0.504568551155514 NRMSE: 0.18621583012762596 MAPE: 291.35183336653216 Predictor: RandomForests Pearson Correlation: 0.45688910314406705 Spearman Correlation: 0.43302826089360635 Coefficient of Determination: 0.13389588906390948 RMSE: 0.4142618107838994 NRMSE: 0.11179737274459094 MAPE: 208.00504510226477 Pearson Correlation: 0.27077066114729614 Spearman Correlation: 0.30732723878573154 Coefficient of Determination: 0.05627289499277566 RMSE: 0.5029961949426858 NRMSE: 0.18563553708962824 MAPE: 285.10109332574854 Fold: 3 Protein: RB1 x_train_column_count: 371 x_train columns: ['FAM189A1', 'IPO7', 'DLL3', 'ABRACL', 'HIRIP3', 'CAGE1', 'GDAP1', 'UTRN', 'EFCAB10', 'TMEM223', 'SSMEM1', 'CCM2', 'GLT8D1', 'PLEKHG7', 'PATE3', 'MAPT.IT1', 'IGF2.AS', 'ZBED4', 'DDX3X', 'DENND2C', 'BTBD2', 'SEC11A', 'GMDS', 'OR8K3', 'ZNF541', 'CCDC102A', 'SPR', 'EPOR', 'ZNF30', 'NANS', 'FLJ30679', 'ACE2', 'TNFAIP8L3', 'MYLPF', 'COL15A1', 'MIAT', 'MLEC', 'UBR3', 'EMC2', 'TMEM196', 'MAP4K2', 'YIF1A', 'IKBKG', 'PTPN20', 'PCP4', 'DOCK9', 'ANTXR2', 'C11ORF68', 'GCNT3', 'PFKFB1', 'FHL3', 'TRA2B', 'SGSM1', 'PRIMA1', 'EDF1', 'SLC4A2', 'GCK', 'POLR3B', 'ZBTB11.AS1', 'ETNPPL', 'LY6E', 'CELP', 'GAK', 'HOMEZ', 'PARVB', 'UGT3A1', 'TUBD1', 'HIPK1', 'CDHR5', 'FGR', 'YJEFN3', 'OR2W1', 'IGFBP3', 'MGARP', 'BRWD1', 'DIS3L2', 'CAMTA1', 'PPIL3', 'C19ORF66', 'IGFBPL1', 'BDNF', 'LINC00917', 'TSPAN14', 'QKI', 'TPBG', 'GP5', 'PITPNA', 'ACVR1C', 'GDF2', 'FAM83C', 'KIAA0101', 'TCL6', 'GLT1D1', 'CLK1', 'KIR2DL1', 'DEFB113', 'GAA', 'CCSAP', 'NABP2', 'ANKRD34B', 'RINT1', 'LCE1A', 'TOE1', 'CD72', 'KIFC3', 'RELL1', 'CPB1', 'LOH12CR2', 'FAM26D', 'GLUD2', 'SMAD2', 'BTG1', 'PSG4', 'BEND2', 'MTHFD2', 'TNPO1', 'EHF', 'ZNF234', 'TRRAP', 'MCAM', 'POLE2', 'GABRA3', 'JADE2', 'EME2', 'MS4A1', 'KLF4', 'SENP2', 'INF2', 'LDAH', 'ZNF468', 'DDX17', 'CNR2', 'GPR155', 'PLIN4', 'CCDC14', 'NLRP1', 'MKS1', 'PPP3CC', 'HAAO', 'RRP8', 'TMEM204', 'SH2D1B', 'CDH7', 'PPIL1', 'ZNF284', 'PDGFRL', 'MPP6', 'TNKS', 'MYL1', 'NR2C2', 'EPHA4', 'TPMT', 'DUSP16', 'NOL11', 'SPRY2', 'SLC22A8', 'PALLD', 'CFAP70', 'SNAPC3', 'KLHDC1', 'EIF2A', 'GTDC1', 'TRIM36', 'CNIH1', 'DCD', 'NDUFAF2', 'C17ORF74', 'PIF1', 'G6PC', 'DUX4L2', 'TMEM87B', 'C3P1', 'GALNT12', 'GPR37', 'SH2B3', 'CCDC186', 'P3H1', 'NDUFS4', 'NPC1L1', 'RAI2', 'SPRR2A', 'SERINC4', 'NFYB', 'RBM38', 'RAB11B', 'EMX2OS', 'TROVE2', 'TAF5', 'OR11A1', 'CPXCR1', 'C12ORF4', 'CXORF40A', 'ANKRD20A9P', 'BRCA1', 'C1QTNF9', 'FGF23', 'TTC4', 'CSPP1', 'STX1A', 'ZFAS1', 'OR2G2', 'SPAG17', 'EIF2S1', 'KRTCAP3', 'C3ORF79', 'FUZ', 'AP3D1', 'CNBP', 'POM121L12', 'SLCO1C1', 'SGIP1', 'LINC01001', 'PNPO', 'GPR26', 'COMTD1', 'GFM1', 'OR5I1', 'LINC01550', 'CSTF1', 'ZNHIT2', 'ARHGEF16', 'RAB27A', 'CTNNA2', 'MRPL54', 'MS4A13', 'PQBP1', 'ISOC2', 'FGF14', 'HPN.AS1', 'CDK15', 'ARHGAP39', 'TUSC3', 'CFAP97', 'EGR3', 'C3ORF62', 'DNAL1', 'ABCG5', 'NFIC', 'MNDA', 'SDHAP2', 'ZNF510', 'PARP9', 'IL36A', 'MRPS10', 'ZNF764', 'ARHGAP9', 'ZNF586', 'STON1.GTF2A1L', 'SH2D6', 'FLNA', 'DDX4', 'YWHAE', 'MRPL3', 'ARHGAP29', 'SLC6A11', 'MARVELD2', 'ATOH8', 'VEGFA', 'C6ORF120', 'MBIP', 'PREX2', 'PGS1', 'MYO3B', 'PRKCA', 'PRR35', 'PWAR4', 'HSP90B3P', 'KCNS2', 'RBP5', 'STK32B', 'LOC100130987', 'PTENP1', 'SNX14', 'PVRL4', 'FAM86C2P', 'INPP5F', 'USP22', 'CEACAM22P', 'HDDC3', 'STON2', 'DHRS2', 'ERCC6L', 'RHOXF1', 'TADA2A', 'INE2', 'HDAC3', 'NOS3', 'BCL6B', 'GKN2', 'CHRM3', 'MOB3A', 'CCDC53', 'TNXB', 'MAPKAP1', 'TUBGCP2', 'PGBD1', 'TAS2R5', 'ZRANB2', 'ARHGEF38', 'METRNL', 'KIF18A', 'PCGF5', 'SPTY2D1', 'PCGF6', 'BTBD17', 'SPNS2', 'CPEB1', 'COL6A1', 'ZNF180', 'PON1', 'LINC01106', 'TMIE', 'SLC25A52', 'MYOCD', 'DHRS3', 'NAPB', 'ADNP', 'GGT6', 'ANP32AP1', 'GOLGA7', 'NDUFC1', 'B3GALT2', 'L3MBTL3', 'GLIS2', 'RBMY1A3P', 'KCTD13', 'PCDHGB7', 'DOCK10', 'OR13C3', 'WDR92', 'TRANK1', 'SFTA1P', 'SNORD88A', 'CSF3R', 'LARGE', 'MTG2', 'OBSL1', 'ENAM', 'KIF1A', 'KLRC1', 'FAM50A', 'COL9A3', 'KIAA2013', 'MOB1A', 'GPR65', 'ITGA4', 'OR9A4', 'RAB11FIP1', 'WDR38', 'CNGA3', 'CDH11', 'CPN2', 'ESF1', 'ATP4A', 'ANKRD26P1', 'MACF1', 'GLDC', 'RAB11FIP5', 'TAAR9', 'GBP3', 'ASIC2', 'GAST', 'OR51T1', 'NEU3', 'GTPBP10', 'TREML3P', 'KCTD17', 'MPHOSPH10', 'APOBEC3F', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.4370487387501469 Spearman Correlation: 0.3995278544194589 Coefficient of Determination: -1.2331634801289506 RMSE: 0.3595189994615406 NRMSE: 0.1314800319856424 MAPE: 1624.6660580166515 Pearson Correlation: -0.025478728010151858 Spearman Correlation: 0.22995348847299887 Coefficient of Determination: -7.889413544616554e+23 RMSE: 196888171556.4533 NRMSE: 138153564952.5333 MAPE: 24958610468799.31 Predictor: ElasticNet Pearson Correlation: 0.2699875601766512 Spearman Correlation: 0.25629137588256606 Coefficient of Determination: 0.04486762585828208 RMSE: 0.23512205602444736 NRMSE: 0.08598670861046202 MAPE: 203.34608256223365 Pearson Correlation: 0.2648345438179262 Spearman Correlation: 0.2741704001311446 Coefficient of Determination: 0.020836636877585524 RMSE: 0.21934353722779712 NRMSE: 0.15391016828367537 MAPE: 201.3920567625135 Predictor: RandomForests Pearson Correlation: 0.40083408558512523 Spearman Correlation: 0.33407979975177804 Coefficient of Determination: 0.07645345128869474 RMSE: 0.23120167854050885 NRMSE: 0.08455298366753543 MAPE: 181.2397981742796 Pearson Correlation: 0.3083803647083683 Spearman Correlation: 0.2762603024975374 Coefficient of Determination: 0.036942161722648525 RMSE: 0.21753214901582188 NRMSE: 0.1526391435338436 MAPE: 205.68896508949268 Protein: CDH1 x_train_column_count: 836 x_train columns: ['CHID1', 'ZFHX4.AS1', 'AMBN', 'NUDT5', 'CETN2', 'PBX4', 'PM20D1', 'CCDC71', 'BSG', 'SLC17A8', 'TNFRSF10B', 'PPIE', 'HNRNPH3', 'NMRAL1', 'ARL4D', 'WIBG', 'PGBD5', 'DUSP5', 'TATDN1', 'SNX8', 'SF1', 'SORD', 'SIRPB1', 'KDM5B', 'MRPS16', 'NKX2.4', 'GPR18', 'FBXO15', 'CYHR1', 'SUPT16H', 'TBC1D29', 'ZNF23', 'JUN', 'HSPA9', 'AQP4.AS1', 'TMEM169', 'TSPAN8', 'RPS27', 'HS3ST6', 'RMDN1', 'ABCF1', 'USH1G', 'SFT2D1', 'ZNF202', 'SEPHS1P1', 'TBX15', 'TMEM176A', 'STARD8', 'ELSPBP1', 'RTP4', 'SLC39A5', 'GCLC', 'CAPN15', 'LRRC28', 'SEMA5B', 'SAMSN1', 'CDH4', 'FAM197Y2', 'CPO', 'PI4KAP2', 'PLEKHO2', 'PUM2', 'SCG5', 'OR9G4', 'CORO6', 'MED30', 'C1ORF185', 'LINC01106', 'CXCR3', 'MAN2B1', 'FAM168A', 'SYNJ2', 'LINC01559', 'RAC2', 'FAM47A', 'RABEP2', 'LOXHD1', 'CAMSAP2', 'CDK2AP2', 'TRIM58', 'BNIP1', 'IQSEC1', 'CKMT1B', 'CATSPER1', 'SLC10A7', 'RHOBTB3', 'SOGA3', 'SNCG', 'ERI2', 'KRTAP12.3', 'IMPDH2', 'OR2D2', 'LPCAT1', 'MEP1A', 'FAM134B', 'ZNF227', 'ZDHHC23', 'ELF5', 'NLRP5', 'ATF5', 'OR13C3', 'MAN2A2', 'ARMCX2', 'YWHAE', 'ACER1', 'FRMPD4', 'PCDHGB2', 'DIO1', 'PEAR1', 'MALSU1', 'ANGEL2', 'LAMP1', 'METTL17', 'CLDN10', 'NCF4', 'YTHDC1', 'MYOF', 'CHRNA3', 'RBM17', 'TARDBP', 'CNIH2', 'IBA57', 'MPST', 'MRPL42P5', 'NAALAD2', 'SNORD114.22', 'UFL1', 'TTLL6', 'RPLP1', 'GRIN2D', 'TBC1D10A', 'PROS1', 'ITPKC', 'LINC00326', 'TYMP', 'NKAIN4', 'GALT', 'ADAMTS18', 'CNBD2', 'DNAI1', 'MMS22L', 'FAM118B', 'ATP1A2', 'ZNF25', 'RASA1', 'C9ORF64', 'STX12', 'C10ORF55', 'SLC26A3', 'B3GNT9', 'KLHL5', 'KLF13', 'COMMD4', 'PRSS23', 'GRK4', 'CNPPD1', 'TBL3', 'HGC6.3', 'LDLRAD2', 'MTCP1', 'RGS13', 'TEDDM1', 'MYO1F', 'F2R', 'WNT10A', 'C5ORF46', 'DSC2', 'P3H3', 'CGN', 'MYT1', 'PTP4A2', 'MOCOS', 'SSX2', 'MAP3K14', 'DOCK9', 'MIR143HG', 'SLC15A4', 'C2CD3', 'NXPE3', 'E2F1', 'C20ORF24', 'PCDHGA11', 'OR8G2', 'C2CD2', 'CRYBB2', 'AMBP', 'PER4', 'CCDC9', 'WIPI1', 'ANK2', 'NOS2', 'ZNF831', 'VMAC', 'LOC154449', 'MMP16', 'HSPA1L', 'SLC38A3', 'ANKRD20A4', 'C5ORF47', 'SRBD1', 'CAPN1', 'FAM210A', 'GULP1', 'HLA.DRA', 'PLA2G2D', 'DEFB118', 'VHL', 'SMU1', 'OR10G9', 'ACOT6', 'FAM138D', 'KLK10', 'EXT2', 'AP2B1', 'ABCD1', 'MRPS34', 'YBX1', 'N4BP2L2.IT2', 'PRRT1', 'SNORD115.1', 'SLC6A17', 'HSD17B10', 'PMCHL1', 'TNIP2', 'C1QBP', 'HYALP1', 'PRB1', 'GOT1', 'TMEM181', 'WDR63', 'PPBPP1', 'FAM195A', 'SNAI3.AS1', 'MZF1', 'SNORD70', 'CAPS2', 'CARD8', 'ZNF557', 'SIDT2', 'ENDOG', 'SMO', 'MOSPD2', 'MAPKAPK5', 'CEP135', 'ZBTB40', 'ARID3B', 'EIF5', 'HMOX2', 'SYTL1', 'ABCB11', 'BOD1L1', 'PRKCB', 'SNORA14B', 'ULK4P3', 'SEC16B', 'SLITRK1', 'KRT222', 'SPAG17', 'HENMT1', 'PLEKHA4', 'LINC01098', 'MCF2L2', 'TCEAL4', 'SON', 'SCMH1', 'TMEM211', 'GZF1', 'GALR3', 'TERT', 'S100A16', 'CBWD1', 'ATF6', 'EOMES', 'RASSF8', 'MTMR11', 'PKP4', 'FHL1', 'FAM20B', 'KLHDC8A', 'AADACL4', 'ITGA8', 'GNGT1', 'ZBTB8OS', 'MSTO2P', 'MBP', 'CMTM8', 'SRRD', 'STYX', 'CRYGB', 'AGTPBP1', 'YWHAB', 'COX16', 'APMAP', 'CHKB.CPT1B', 'VPS72', 'PPP1R14B', 'METTL7B', 'ZNF823', 'TTC27', 'SNORA9', 'TM7SF3', 'RWDD2A', 'BTBD1', 'TMEM38A', 'AMOTL1', 'PTF1A', 'LRTOMT', 'CREB3L1', 'TXK', 'HMG20B', 'AGER', 'SLED1', 'ARHGEF11', 'VPS26B', 'TEAD4', 'WARS', 'KIAA0922', 'CXORF21', 'HERC5', 'TEX12', 'CCDC81', 'LMNTD2', 'CENPL', 'RAB3IL1', 'TAF1L', 'TAS2R10', 'ARPP21', 'CEP44', 'MFSD11', 'DDX21', 'ITIH5', 'DCAF7', 'WNT2B', 'TTLL7', 'SEMA7A', 'ZNF773', 'ARL16', 'FCF1', 'LINC00298', 'FARP1', 'TNFAIP8L3', 'RNF41', 'DLEU7', 'MYBPC2', 'CACNA1C', 'CDKL4', 'CAPZB', 'STX10', 'TPRN', 'LINC00597', 'LMOD2', 'POU4F3', 'MRPL17', 'ADAMTS6', 'UBE2Q1', 'BMP8B', 'FCGR3A', 'OBP2A', 'NNMT', 'TMEM132C', 'TREML1', 'SMOX', 'NEK4', 'ZNF706', 'ASPRV1', 'VTRNA1.3', 'EHF', 'CHD1', 'CRCP', 'SAMD1', 'SLC6A19', 'C19ORF52', 'SLC48A1', 'PCSK1N', 'PSMD12', 'P2RX4', 'AIF1L', 'ZNF493', 'OR3A2', 'NEDD4', 'SPZ1', 'GRIA3', 'AS3MT', 'MS4A15', 'FAM114A2', 'MVB12A', 'ZNF567', 'FKBP7', 'RAB26', 'CTDSP2', 'ACOT4', 'TDRD3', 'GATAD1', 'TRIM16L', 'ARHGAP10', 'KRT76', 'LINC00304', 'SNORD45A', 'ZNF839', 'BHMT', 'AGPAT1', 'ANKFN1', 'ZNF252P', 'EGLN1', 'EVX2', 'GNAL', 'CCDC108', 'SV2B', 'WFDC9', 'SGSH', 'PRRG2', 'HACE1', 'FBXW8', 'C19ORF80', 'ODF3', 'KRT72', 'IL20RA', 'FUBP3', 'TMEM189.UBE2V1', 'ASAP1', 'KCNQ5', 'HIST1H1T', 'ASB17', 'H1FNT', 'MAP3K1', 'FAM19A1', 'SNHG3', 'PGAM1', 'AGMAT', 'APOL5', 'TUBB4A', 'DYNLT1', 'CCM2', 'FRRS1L', 'UTP3', 'ITGB1BP2', 'GRTP1', 'AFMID', 'FYTTD1', 'NCALD', 'PLAGL2', 'BHLHA15', 'CTSG', 'CHRNB3', 'EMC4', 'CISH', 'STXBP2', 'FZD2', 'STK19', 'MCM2', 'NAT2', 'KIAA1429', 'SPATA6L', 'CNIH3', 'RSPH3', 'SNORD116.13', 'TRIM61', 'NGRN', 'NDP', 'FAM110D', 'TENM1', 'CXCL8', 'USP51', 'ZNF559', 'SIAH3', 'DOC2A', 'ERCC2', 'KRBA1', 'CHRD', 'ZDHHC8P1', 'NDUFAF2', 'TMEM260', 'ALS2', 'RMI2', 'CDH6', 'OXCT2', 'SERPINA4', 'LPAR3', 'MKRN1', 'TMPRSS9', 'TRPC3', 'TWF2', 'PKP1', 'HCG4B', 'CUL9', 'ATG9B', 'ARHGDIG', 'ATP5G2', 'SPIB', 'ASCC2', 'IGFBP2', 'YWHAQ', 'FAM167A.AS1', 'ARHGEF33', 'ARID5A', 'CELF5', 'MYCBP2', 'MYLPF', 'DHRS4', 'HEPACAM2', 'HIST1H2BK', 'SNORD65', 'CLP1', 'ADGRE4P', 'AOC2', 'UBL5', 'PSME3', 'ICOSLG', 'KIF4A', 'SOX1', 'DIDO1', 'RAPSN', 'USH1C', 'SLC4A4', 'DNAJC14', 'ABL1', 'WDFY3.AS2', 'SLC45A3', 'NUP188', 'HOXD10', 'CORIN', 'KLRB1', 'OR14C36', 'AKR1B15', 'SMPD1', 'UBR7', 'TDGF1P3', 'SLC26A2', 'FAM3A', 'FAM105A', 'LRRC8A', 'ARHGAP11A', 'SLC6A9', 'SFRP1', 'RBSN', 'OMA1', 'VEGFB', 'TCTA', 'KRT9', 'ZNF271P', 'XPO4', 'LMOD1', 'ZP2', 'FBXL3', 'THOC6', 'ARHGEF15', 'OGFRL1', 'RGS22', 'FAF2', 'OLFML3', 'AK4', 'HCN4', 'SNRNP25', 'KCNMB3', 'LINC00301', 'WEE2.AS1', 'GPM6B', 'HFM1', 'CRP', 'ARHGEF2', 'IGF1', 'FAM150A', 'OTOA', 'WDR4', 'STUB1', 'MRPL3', 'NCK1', 'SERINC4', 'OCEL1', 'IFNW1', 'CEP68', 'OR5R1', 'FDCSP', 'NMNAT2', 'PNPLA5', 'SLC2A3', 'DAPK2', 'GFI1', 'HIST1H2BM', 'IFT80', 'BCORP1', 'OR6C4', 'GNL3', 'CRAMP1L', 'MAGEA10', 'ARPP19', 'KLHL10', 'PRAM1', 'PPP1R3D', 'LILRA6', 'FRG1B', 'HAUS7', 'ALPL', 'SRP14', 'CCDC66', 'FGF17', 'C2ORF47', 'NME1', 'GPR149', 'KCNU1', 'GPX7', 'CPTP', 'LGALS1', 'PCDHGC4', 'KIF6', 'KIF22', 'HMHA1', 'C6ORF201', 'DNAJC3', 'RGAG1', 'MGC16275', 'COMMD8', 'LINC00238', 'PMS2', 'SPATA7', 'CACNA1H', 'CLNS1A', 'KRTAP9.8', 'KCND2', 'NECAB2', 'RFX7', 'TRPC6', 'GDI1', 'TCF21', 'SLC46A1', 'FAM182B', 'ATP6AP1L', 'KCNJ4', 'ZNF738', 'PHYHD1', 'PIGU', 'DRAXIN', 'SNRPE', 'ECEL1', 'LINC00475', 'PPIP5K2', 'MIF', 'ANKMY2', 'TSTD1', 'DLEU1', 'SPATC1L', 'ZFAND5', 'SF3B5', 'KHK', 'RNF181', 'ALG9', 'NEXN', 'DPP8', 'MEMO1', 'ASXL2', 'CHRNA1', 'GAS2L2', 'PGLYRP3', 'TBRG1', 'CDH8', 'TMEM41B', 'SAMD8', 'RGR', 'KLRC4', 'LINC00923', 'FAM76A', 'SF3A2', 'ROBO1', 'ASMT', 'OR6N2', 'TMEM185B', 'GPR88', 'ISOC1', 'ZFAND2B', 'MAP3K2', 'DPY19L2P2', 'IL21', 'TNFAIP2', 'ST13P4', 'OR7C2', 'MPI', 'FBLIM1', 'MCF2', 'PDCD10', 'ERCC6L', 'SIGLEC16', 'IL17RC', 'OR8G5', 'TRIM37', 'TEX40', 'KDELC2', 'THAP9', 'FAM50B', 'MSH2', 'CX3CL1', 'MYL6B', 'CD27.AS1', 'TRMT10C', 'CYTH1', 'STMN4', 'ASIC4', 'OR5W2', 'GIPC2', 'SUSD5', 'SHROOM2', 'SPANXN4', 'KIAA1549L', 'DNM2', 'TTTY22', 'ZNRD1.AS1', 'SNORD91A', 'GUCA2B', 'INO80C', 'TIGD7', 'STON1', 'FTHL17', 'IRAK1BP1', 'SARS2', 'PIDD1', 'SCNN1D', 'LCN1', 'DIRAS3', 'OR8S1', 'FANCG', 'GTSE1.AS1', 'NFATC1', 'DCX', 'SMARCD2', 'MUC5B', 'RIPK4', 'TMCO3', 'SLX1B', 'SLC35B3', 'EPN2', 'TPX2', 'EAF1', 'ERGIC1', 'NLRC4', 'LRRC29', 'C12ORF49', 'WDR13', 'DEPDC5', 'HEPHL1', 'CDC42SE1', 'KLHL6', 'UBP1', 'DUSP9', 'RPS6KA1', 'OLAH', 'IL1B', 'EVI2A', 'SKAP1', 'C8ORF44', 'ATF3', 'CELA2A', 'LOC642929', 'CYP2U1', 'CCDC25', 'TPP1', 'RAVER2', 'AP3S2', 'CLPSL2', 'FAM69B', 'SPSB2', 'CAMKK1', 'FAM89A', 'NXF4', 'SNORD115.8', 'ZNF322', 'STYXL1', 'CST1', 'C17ORF104', 'SSX1', 'METTL22', 'SYCE1', 'ZIC3', 'UAP1', 'LOC100190986', 'KRTAP5.11', 'PLOD3', 'ZNF641', 'MTHFS', 'ADAMTSL2', 'PYGO1', 'ING1', 'LOC100133050', 'ATP1B1', 'ZCCHC13', 'PDHX', 'ZNF207', 'WDR7', 'TRANK1', 'KIAA1147', 'BORA', 'LRP2BP', 'SNORD121A', 'ZNF112', 'GNB3', 'KRTAP23.1', 'ANKHD1', 'MPV17L2', 'ACTRT2', 'JPH2', 'DDX1', 'KRTAP10.4', 'GPR176', 'CES5A', 'GOLGA8A', 'CD46', 'ABHD6', 'TBX2', 'TTPAL', 'MRTO4', 'GPR3', 'ITPR1', 'C1S', 'MBOAT7', 'TMEM161B', 'PER3', 'LRIT3', 'C5ORF58', 'NF1', 'PLCZ1', 'POLA1', 'C9ORF173', 'LRRC43', 'DEFB132', 'OPLAH', 'SUPT20HL1', 'NME1.NME2', 'CDV3', 'GALNT14', 'DKFZP434H168', 'ZNF503', 'RSG1', 'NUDT1', 'SNAI2', 'ZBED8', 'IL27RA', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.8717454974332134 Spearman Correlation: 0.840134315627822 Coefficient of Determination: 0.7158969364571794 RMSE: 0.6261350819933935 NRMSE: 0.09969986337909516 MAPE: 475.1736699106091 Pearson Correlation: -0.024103213358867955 Spearman Correlation: 0.1414285500535578 Coefficient of Determination: -3.808041771688823e+23 RMSE: 581017976868.3314 NRMSE: 114225214655.82736 MAPE: 20962690730578.27 Predictor: ElasticNet Pearson Correlation: 0.7358371858889692 Spearman Correlation: 0.7085774038989666 Coefficient of Determination: 0.5170124511518706 RMSE: 0.8163906963774353 NRMSE: 0.12999437858307622 MAPE: 520.0477920522978 Pearson Correlation: 0.44420162034386257 Spearman Correlation: 0.4373296425142459 Coefficient of Determination: 0.14304927517780874 RMSE: 0.8715988392274234 NRMSE: 0.17135195203621742 MAPE: 235.10506411338622 Predictor: RandomForests Pearson Correlation: 0.6176514383814601 Spearman Correlation: 0.5709219600243707 Coefficient of Determination: 0.3784254471579289 RMSE: 0.9261401079841869 NRMSE: 0.14746984299611268 MAPE: 239.35541953271957 Pearson Correlation: 0.6392205857021498 Spearman Correlation: 0.39029670070274614 Coefficient of Determination: 0.3902786612967063 RMSE: 0.7351981663591401 NRMSE: 0.14453626515926948 MAPE: 155.23152459286516 Protein: CDH2 x_train_column_count: 474 x_train columns: ['PSMG1', 'SMR3B', 'LY6K', 'CEBPB', 'CHST8', 'NANS', 'NDUFB6', 'TMEM159', 'CLTCL1', 'GLT6D1', 'VCP', 'SLC9A3R2', 'FBXL3', 'CDH12', 'USB1', 'PSMD5', 'PHF20L1', 'IFIT1B', 'KRBA1', 'OGN', 'PROM1', 'ASPM', 'SCMH1', 'DEFB105A', 'NCF1', 'C10ORF10', 'CDKL4', 'VLDLR', 'RAB40A', 'TM6SF2', 'ZNF567', 'SKP1', 'ZNF839', 'ADD2', 'SNORD57', 'C9ORF163', 'RASA1', 'PTBP2', 'ANAPC15', 'TMEM145', 'RAB22A', 'KIF20B', 'KIF3C', 'GDF6', 'DNHD1', 'RNY5', 'SNX5', 'ZNF366', 'DCAF5', 'GLMN', 'GSTK1', 'DFNA5', 'GIMAP7', 'SEBOX', 'NPPC', 'SLC22A10', 'SQSTM1', 'PRDM14', 'C9ORF142', 'JAG1', 'FLG2', 'SLC34A3', 'CYMP', 'R3HDM1', 'FAM98C', 'SLC12A6', 'SEC1P', 'UBXN4', 'HYLS1', 'CYP1B1.AS1', 'CD177', 'DNAI1', 'TMEM140', 'DEFB115', 'ARL10', 'MED28', 'TIGD7', 'LURAP1L', 'C10ORF88', 'SCARNA12', 'SNAPIN', 'CST4', 'CPEB3', 'OLIG1', 'SNORD58C', 'HIST2H4A', 'ORC6', 'PROSER2', 'UBE2A', 'GUCY1B3', 'PGAP2', 'TEDDM1', 'FOXO1', 'GNMT', 'SNORA26', 'ARL13B', 'C2CD2', 'GTF2H4', 'SLC38A8', 'CLSTN3', 'PTPRU', 'GCKR', 'GDF10', 'E2F4', 'SLC7A6OS', 'NAP1L6', 'AKAP3', 'GFPT1', 'ZCCHC24', 'SNORD78', 'RBFA', 'TAF13', 'TMEM97', 'ADPRHL2', 'FTH1P3', 'OLR1', 'NAPSA', 'AP4S1', 'ALDH1A2', 'SMUG1', 'MRPL40', 'CFH', 'NUDT7', 'MRPS36', 'FAM81A', 'TM4SF1', 'SCAMP4', 'KIAA0125', 'KLK5', 'MT1M', 'FAM66C', 'MT1B', 'MEFV', 'CTHRC1', 'PHYHD1', 'LYPD3', 'AK2', 'NLN', 'MBTPS2', 'LYPD6B', 'SMAP1', 'UGT1A8', 'DUSP5P1', 'DPH3', 'MRPS15', 'ZNF98', 'C6ORF10', 'ATP13A5', 'CDC42BPG', 'BICC1', 'TMPRSS12', 'SASS6', 'TOR1B', 'PAQR8', 'KANK4', 'FOXQ1', 'POLE', 'LRRC14B', 'CEP170B', 'HIST1H2AA', 'PCDH15', 'LCE3A', 'OR4A16', 'HLA.DQA1', 'EIF4E', 'GPR20', 'CTAGE9', 'PRRT3', 'TUBB', 'KRCC1', 'TBC1D2', 'TRIM42', 'AGPAT4', 'CA4', 'EXOSC5', 'NOS1AP', 'JRK', 'DDIT3', 'HSPBAP1', 'MYOC', 'RBCK1', 'EGLN2', 'FBXL15', 'DEPTOR', 'CHP2', 'IL6ST', 'CDC42SE1', 'CDRT4', 'GLIPR1L1', 'MAP3K15', 'KRT39', 'SOCS5', 'MMADHC', 'PAAF1', 'PLCG2', 'SLC6A18', 'OR6C65', 'SBK2', 'SLC22A5', 'ADRA2C', 'VDAC3', 'SNORD116.1', 'SMIM15', 'CXCL8', 'KIT', 'ZFYVE9', 'LOC493754', 'MIF4GD', 'SFT2D3', 'MYOM3', 'GPR101', 'NAT8', 'OR8K5', 'ADAM15', 'PPP5C', 'GPR119', 'ACAD9', 'NPHS2', 'STAT1', 'LOC646214', 'TUBGCP2', 'OR2T6', 'RASGRF2', 'RTCA', 'TGIF2', 'FABP4', 'PCSK1N', 'ATP5J', 'OR2B3', 'VSIG1', 'LOC90246', 'FIBIN', 'CACTIN', 'CCT6P1', 'ZCWPW1', 'NUBPL', 'MEP1A', 'SMAGP', 'CDC16', 'RELT', 'ASAP1.IT1', 'CCDC28B', 'FAM184B', 'YBEY', 'SNORA78', 'TBC1D3P2', 'COLQ', 'ABCC2', 'ACTR3C', 'CYR61', 'GUSBP1', 'INPP4A', 'CERS4', 'MRE11A', 'LHX9', 'NPAS2', 'ASMTL.AS1', 'PIN1P1', 'COPRS', 'ZRANB3', 'KCNT2', 'SEMG2', 'DUSP27', 'FIGNL2', 'SBSN', 'DDX43', 'PSMG2', 'OR1A2', 'PATE3', 'CDC25B', 'NOLC1', 'HERPUD1', 'SNORD115.48', 'PPP1R3G', 'DVL2', 'VPS37A', 'ATP12A', 'DSTN', 'OGFRL1', 'ZCCHC3', 'CEACAM19', 'CSN1S1', 'GALNT1', 'SPSB4', 'OR6B3', 'SYCE2', 'CAPRIN2', 'PRIMPOL', 'GLYCTK', 'TBX4', 'ARSG', 'THUMPD1', 'NT5DC3', 'N4BP2L1', 'TAF10', 'NADSYN1', 'LZTR1', 'OSGIN1', 'STAM', 'WFDC11', 'GTF3C5', 'HIGD2A', 'SNORD51', 'COL6A6', 'ATG101', 'RPL31P11', 'SLC11A1', 'CYP4Z2P', 'KRI1', 'ABCB9', 'INADL', 'SH2B1', 'HEATR6', 'TMEFF2', 'FAM224B', 'PTGER1', 'ZNF826P', 'WDR54', 'SHH', 'COL18A1', 'SLC9A3R1', 'ACPT', 'GLTSCR2', 'ZNF814', 'GALK1', 'CRYM', 'KRTAP4.8', 'DKFZP434A062', 'MCTP2', 'APBA1', 'GOLGA6L9', 'VGLL4', 'RPS6KA4', 'MTG1', 'TMEM161B', 'RXFP1', 'SLC7A2', 'EIF4A2', 'VWA8', 'DCD', 'WWP2', 'LMTK3', 'IL20RB', 'DMRTC2', 'ANO8', 'NPY5R', 'HOXD10', 'EOGT', 'RAB3IL1', 'GOLM1', 'PRKX', 'NCAPH', 'TMEM45B', 'MSH2', 'PCDHGB2', 'NUP107', 'ATP1B3', 'IFNAR1', 'KCNMB2', 'AARS', 'THNSL2', 'SMYD3', 'HNRNPA2B1', 'ABCC10', 'PPP1R14D', 'PAPSS2', 'ANP32B', 'CENPU', 'KRTAP27.1', 'WDR60', 'GATS', 'DNAJC21', 'ARSA', 'SLC2A2', 'CA2', 'ARL8A', 'TIE1', 'FITM1', 'SNORA81', 'PSMD1', 'UBE2W', 'PIGQ', 'METTL10', 'CALCR', 'DAND5', 'DIP2A', 'AIMP2', 'CDH3', 'ATG5', 'NPDC1', 'ZGPAT', 'LILRA1', 'DMRTC1B', 'RSBN1L', 'UBL4A', 'RAD51AP1', 'TAB2', 'IL11', 'ZNF354A', 'IL9R', 'COL15A1', 'HIST1H4C', 'FANK1', 'OTOS', 'ETF1', 'ARL15', 'RPL22', 'CYP2B7P', 'CNOT7', 'CELSR2', 'SLC36A4', 'CLEC12A', 'NUTM2F', 'STXBP2', 'TUBA3C', 'OR5AC2', 'C7ORF49', 'PIK3IP1', 'CPLX1', 'HOXA6', 'CDIPT', 'SMCHD1', 'HCG18', 'TPPP3', 'TFIP11', 'SNORD111', 'GHDC', 'SUMF2', 'VAMP3', 'C5ORF38', 'CORT', 'SSFA2', 'GAGE1', 'ACSM4', 'MAPK4', 'CNPPD1', 'AP1B1', 'PMPCB', 'SNX4', 'TUBA1B', 'ABHD14A', 'LRIT2', 'SNORA21', 'GATA1', 'PLCH2', 'JUP', 'PDRG1', 'PDCD1LG2', 'HIST1H2BK', 'DHX34', 'FBXO22', 'RFXANK', 'RHEBL1', 'SKIDA1', 'CDHR5', 'PHYHIP', 'NUMA1', 'C10ORF95', 'NPTX1', 'DUS3L', 'BDP1', 'PCDHGA3', 'ZNF334', 'FOXD1', 'AATK.AS1', 'TCP10L2', 'CRYBA1', 'PLD1', 'PAH', 'OR13C4', 'MS4A7', 'RCCD1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.49881384993574124 Spearman Correlation: 0.4633159802383937 Coefficient of Determination: 0.18849191019404055 RMSE: 0.3434334332478589 NRMSE: 0.12444142084493766 MAPE: 843.9414140614645 Pearson Correlation: 0.029285887764385742 Spearman Correlation: 0.07374925067831602 Coefficient of Determination: -5.726240454454957e+21 RMSE: 25121447977.89242 NRMSE: 13236583966.263634 MAPE: 1685795700883.4148 Predictor: ElasticNet Pearson Correlation: 0.39988815526268756 Spearman Correlation: 0.40297682907526394 Coefficient of Determination: 0.1344677843235118 RMSE: 0.3546808685245764 NRMSE: 0.12851687387657673 MAPE: 819.9808630968803 Pearson Correlation: 0.09881786781541925 Spearman Correlation: 0.06030249753737578 Coefficient of Determination: -0.0178459052230302 RMSE: 0.3349275669949559 NRMSE: 0.1764745753129576 MAPE: 1553.3925797861698 Predictor: RandomForests Pearson Correlation: 0.4189086454841823 Spearman Correlation: 0.37493532636278576 Coefficient of Determination: 0.12310076447272877 RMSE: 0.3570022805231943 NRMSE: 0.12935802613348588 MAPE: 785.1318548640677 Pearson Correlation: 0.11745484937599943 Spearman Correlation: 0.10791406376638114 Coefficient of Determination: 0.005096391278430645 RMSE: 0.331131411822356 NRMSE: 0.17447436709505135 MAPE: 1696.6269062843455 Protein: CDH3 x_train_column_count: 75 x_train columns: ['ADIG', 'KIAA2018', 'TCAF1', 'ORAOV1', 'TEX2', 'P2RY8', 'ACKR1', 'EFHC2', 'TNXB', 'ITPR3', 'RNF17', 'VPS52', 'NEUROG2', 'FAM186A', 'DNAJB14', 'C12ORF10', 'WTAP', 'CLRN1.AS1', 'ABCA10', 'AP4M1', 'SMC2', 'PFDN2', 'NFIA', 'KCNE1', 'RNF168', 'HSFY2', 'SIVA1', 'ACBD6', 'TMEM19', 'SNORD77', 'MEIS1', 'RNF214', 'GPR1', 'PCDH10', 'GMCL1P1', 'PALB2', 'INE1', 'TMEM135', 'MYT1', 'YDJC', 'NKX1.2', 'SNORD114.8', 'TPGS2', 'SLC39A8', 'SLC5A4', 'DIMT1', 'ATAT1', 'RTN4RL1', 'SPRR1B', 'NINJ2', 'ARMT1', 'S1PR5', 'KARS', 'NGLY1', 'PERP', 'ECEL1', 'SH2B3', 'GPR6', 'CDC14B', 'SNORD30', 'WNT9A', 'TM6SF2', 'SGCE', 'LTF', 'ZNF69', 'NID2', 'CEBPA', 'MTRF1L', 'KRTAP10.6', 'FZD8', 'NBPF6', 'HNRNPR', 'FANCI', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.40093907242863697 Spearman Correlation: 0.4032696365116817 Coefficient of Determination: 0.16073594235440103 RMSE: 0.19468393721992894 NRMSE: 0.1365858009344509 MAPE: 603.9384915349975 Pearson Correlation: 0.35555233404828435 Spearman Correlation: 0.36650169226631174 Coefficient of Determination: 0.12106706421734648 RMSE: 0.17656043434722943 NRMSE: 0.15357488178975656 MAPE: 154.71729629148913 Predictor: ElasticNet Pearson Correlation: 0.34240879812275793 Spearman Correlation: 0.3538545361082345 Coefficient of Determination: 0.09540303666190753 RMSE: 0.202119572612901 NRMSE: 0.14180247278785782 MAPE: 288.10617061057957 Pearson Correlation: 0.257778519176746 Spearman Correlation: 0.2908793470689073 Coefficient of Determination: 0.0627827548291694 RMSE: 0.1823205636057803 NRMSE: 0.15858512756337062 MAPE: 145.44109045703186 Predictor: RandomForests Pearson Correlation: 0.37941136025466776 Spearman Correlation: 0.36985942166985014 Coefficient of Determination: 0.11839454735242638 RMSE: 0.19953447481657172 NRMSE: 0.13998882725527007 MAPE: 304.756480534217 Pearson Correlation: 0.23700878989761387 Spearman Correlation: 0.28771086307719146 Coefficient of Determination: 0.05514629552661754 RMSE: 0.18306183196184458 NRMSE: 0.15922989376242278 MAPE: 133.53184617523428 Protein: PTEN x_train_column_count: 886 x_train columns: ['CYP27C1', 'ZP3', 'HBS1L', 'VLDLR', 'HOXA13', 'CD38', 'GSTA3', 'SPSB1', 'ERMAP', 'TMEM116', 'CTAGE10P', 'FAM161A', 'GPX3', 'SNAP23', 'ZNF177', 'LRRC74A', 'NUP153', 'PIFO', 'METTL21A', 'HIST1H2BM', 'SAP30BP', 'TELO2', 'VASH2', 'ZMAT3', 'LMBR1', 'SRPK2', 'ZNF831', 'ZNF770', 'EEF1B2', 'ZNF320', 'C20ORF141', 'RNU6ATAC', 'ZMYM2', 'SLC7A10', 'WNT5B', 'SNTA1', 'LOC401463', 'GRAMD1B', 'IGLL1', 'PPP1R10', 'KCNMB1', 'BLNK', 'SART3', 'LINC00628', 'IFT122', 'IFNGR1', 'FAM27L', 'EMILIN2', 'CNTNAP5', 'CACNG4', 'PLEKHB2', 'C1ORF53', 'TRNT1', 'SLC22A12', 'VPS33A', 'R3HDM2', 'AIFM1', 'GUCY1A3', 'CPNE8', 'DUX4L6', 'GAS7', 'CNNM2', 'PWWP2A', 'RHOT2', 'SERPINB3', 'C9ORF16', 'AKNA', 'PCSK2', 'COL6A3', 'FOXQ1', 'CDH11', 'LAMB2', 'TMEM91', 'POMK', 'ANKRD13A', 'CYSTM1', 'CCDC25', 'ANAPC10', 'LINC00518', 'GBGT1', 'TCP10L', 'RASA3', 'PLCZ1', 'SPEG', 'POLB', 'RNF115', 'ATAD3C', 'FAM173A', 'C12ORF74', 'BMS1P6', 'ARF3', 'TARM1', 'ACTL8', 'CFL2', 'ZRSR2', 'RBFOX2', 'BRI3', 'HMGB3P1', 'PNPLA1', 'DLGAP2', 'FRAT2', 'CARD11', 'TCF3', 'FAM189B', 'SPON1', 'CACNG5', 'RFX3', 'VCX3B', 'LINC00893', 'ZNF700', 'OR4K14', 'UBE2D4', 'TEKT5', 'HIST1H3F', 'PRKCD', 'ZNF311', 'RNF5', 'OR5H15', 'DDX3X', 'E2F3', 'MTL5', 'BTN3A2', 'CRIPT', 'RPL7A', 'SYT4', 'TLE6', 'GLT1D1', 'SLC30A8', 'SUSD2', 'FUT5', 'IHH', 'TENM4', 'OR1M1', 'C20ORF202', 'TMEM50B', 'LCE1B', 'BTBD6', 'SPX', 'PTRHD1', 'SUGCT', 'TJP3', 'ZNRD1.AS1', 'XKRY', 'HGSNAT', 'ARL17A', 'ANAPC7', 'ALDH16A1', 'DIP2A', 'PROSER2', 'C19ORF54', 'TAAR1', 'BRWD1', 'BCL2L1', 'CTSS', 'ARF5', 'TRIM33', 'ACTR2', 'GULP1', 'SLC22A24', 'PTPRA', 'PTCHD3', 'FBF1', 'KIAA0930', 'TMPRSS4', 'NOMO2', 'HES5', 'CLDN16', 'C19ORF66', 'DSCR9', 'RNF4', 'RNF144B', 'CEP162', 'TACSTD2', 'FAHD1', 'PIWIL2', 'ITPR2', 'SYT1', 'SNORD56B', 'DEC1', 'C21ORF91', 'DHX35', 'SNORA15', 'ZNF512', 'CDON', 'DDX24', 'SUPT20H', 'HACD2', 'AATBC', 'EVA1B', 'SLC25A53', 'PLCXD3', 'NRSN2', 'SWSAP1', 'NHLH2', 'EXOSC7', 'DUSP9', 'ABCA9', 'RASA4CP', 'RNF130', 'ZNF90', 'RPP21', 'OR8U1', 'FAR2', 'DTX1', 'GK', 'TK2', 'LINC01548', 'DHRS7', 'AKAP8L', 'SH2D5', 'TIMM13', 'CCDC24', 'CABIN1', 'SV2B', 'AFP', 'MAP1A', 'TTC37', 'AMT', 'FAM53A', 'TRDN', 'CEP44', 'OR2W3', 'TERT', 'MTMR14', 'RMDN3', 'TNNT3', 'MPC1', 'DPP7', 'OLIG1', 'MRPL46', 'ZNHIT6', 'PPP1R27', 'LOC646471', 'DSC1', 'C2ORF73', 'NEGR1', 'B3GNT2', 'CENPA', 'RCCD1', 'CCKAR', 'CXORF66', 'NFYB', 'HPYR1', 'SUFU', 'RDH13', 'CMAHP', 'KRTAP11.1', 'DSCR8', 'KLK6', 'CXORF40A', 'TMEM14C', 'COX19', 'EP400', 'GNG5', 'C2ORF44', 'SPACA6P', 'OTOR', 'SCN2B', 'LIN9', 'MSX2', 'SPATA33', 'SMCR5', 'PIEZO1', 'SGOL2', 'TIMM10B', 'MBLAC2', 'NKX2.5', 'STATH', 'HTR1D', 'INTU', 'BCAR3', 'GINS1', 'TTC23L', 'TSGA10', 'IL13RA1', 'RANBP3', 'OGDH', 'USH2A', 'NFIB', 'GSTK1', 'POLE2', 'ROPN1L', 'ADAMTS2', 'ADIPOR1', 'MPDZ', 'TMEM17', 'SLC25A48', 'METTL2B', 'RPL19', 'LCE1E', 'USP17L2', 'MYCL', 'SNAR.I', 'CAPNS1', 'SNORA74A', 'PAXIP1.AS2', 'TMEM79', 'CMC2', 'KCTD2', 'MYADM', 'UBE2Z', 'DUSP3', 'RPS6KA6', 'FAM102A', 'DNAJB6', 'UGDH', 'PDILT', 'SNORD113.2', 'SIAE', 'DEFB121', 'CCDC112', 'LINC00982', 'CNOT1', 'OR10Q1', 'OR5B21', 'ZNF592', 'FOXL1', 'PCDHGB8P', 'CHP2', 'EPB41', 'PCF11', 'SNORD115.9', 'PCP4', 'SSR4', 'TNFRSF10A', 'FRG1', 'DNAH3', 'NAT8B', 'FAM183CP', 'CALHM2', 'ARID1A', 'CDH20', 'ICOS', 'TRMT13', 'ATG7', 'AP2M1', 'RFPL1S', 'BOLL', 'HOXC9', 'KCNH6', 'DNAJC22', 'PRAMEF11', 'SC5D', 'TMEM47', 'CHN1', 'DUX4L1', 'DEF8', 'HORMAD1', 'ANKRD30BL', 'SHISA3', 'PSMD3', 'ARL10', 'MAN2B2', 'TFAMP1', 'AP1S3', 'TCP10', 'NR4A2', 'LOC220729', 'HLA.DMB', 'DMTF1', 'ZNF765', 'PGAP2', 'CFH', 'BLOC1S5', 'TAAR2', 'CASD1', 'PQBP1', 'C1QB', 'C3ORF79', 'PLEKHH1', 'TMTC1', 'RLF', 'COLGALT2', 'EAF2', 'FGD4', 'ANKS4B', 'DYDC2', 'PTX4', 'RAB6A', 'ARHGAP33', 'ERH', 'ADAMTS15', 'C1ORF186', 'DTX2P1.UPK3BP1.PMS2P11', 'ADI1', 'ARMC10', 'HBZ', 'SLC16A11', 'LACTB', 'UGP2', 'SNORD116.10', 'DNA2', 'ZG16', 'ZBTB7B', 'BREA2', 'C6ORF10', 'LRRC40', 'IP6K3', 'SSX3', 'HOMER3', 'CRCT1', 'UBE2Q2P1', 'BACH1', 'LILRA4', 'FNDC5', 'IRF8', 'MRPS7', 'RPTOR', 'TNFSF4', 'PCBP2', 'ISCA1', 'FBXO41', 'TBC1D23', 'TEAD1', 'APBB2', 'SNORA11', 'SELO', 'DLG1', 'RNF148', 'JAKMIP2', 'TMEM25', 'ACOT4', 'ZNF532', 'T', 'DSCAM', 'AP2A1', 'SLC43A3', 'DYNLRB1', 'CETN1', 'CYP46A1', 'EN1', 'ZFP64', 'TSPAN3', 'LAMA1', 'ZP4', 'CCDC57', 'SLC7A8', 'TMLHE', 'CCM2', 'PCDHB7', 'PRR32', 'SNAI2', 'TTTY17A', 'AURKAIP1', 'UG0898H09', 'LRRFIP2', 'REG4', 'INTS10', 'PUS7L', 'HOXB6', 'APOL4', 'KCTD18', 'NR1I2', 'SLC26A4.AS1', 'KLRD1', 'CEP41', 'LINC00669', 'WDR63', 'LAX1', 'CCR4', 'SSTR4', 'LINC00152', 'TUBAL3', 'SERPINE1', 'STRN', 'RXFP2', 'SOWAHD', 'ADCK4', 'SLC2A9', 'EXPH5', 'OR4X2', 'CRMP1', 'BOD1L1', 'MARVELD1', 'ZSCAN23', 'ABCG2', 'MKRN3', 'PNMA5', 'HIGD2A', 'ANKRD32', 'SNORD115.45', 'MAGEB18', 'TSPAN2', 'ASB12', 'EIF3C', 'TM6SF1', 'USP48', 'MBP', 'MSR1', 'CACNA2D4', 'SMNDC1', 'DAPK2', 'SOCS2', 'PTPN11', 'ALG3', 'PABPN1', 'PAK1', 'HIST1H3E', 'PRDX3', 'C7ORF49', 'C15ORF57', 'STAU2', 'ACTL9', 'HLA.DQA1', 'TPM2', 'OR10G9', 'SLC30A7', 'SMIM7', 'MEG8', 'TRPS1', 'AGPAT2', 'IGFL1', 'MANEAL', 'HMBOX1', 'CSRNP2', 'NT5C1A', 'UGGT2', 'OCLM', 'AARS', 'SNX15', 'MT1L', 'MAU2', 'GALNT15', 'CRIP3', 'OTC', 'SLC45A4', 'CDK10', 'TARBP2', 'RASA2', 'LOC727896', 'PRPF38A', 'CENPP', 'PIK3C3', 'SLC22A25', 'TGFBRAP1', 'SEL1L2', 'PPRC1', 'NLRP5', 'DPP4', 'KIF1A', 'NUFIP1', 'DACT2', 'NDUFS2', 'DNMT3L', 'ZZZ3', 'C7ORF66', 'LINC00523', 'PPP1R11', 'TSPO', 'FKBP6', 'EEF1A1', 'RHOBTB3', 'FAM214A', 'ARHGEF2', 'STRBP', 'SPATA31D5P', 'SNORD62A', 'CMTR2', 'WSB1', 'KRTAP9.8', 'KCTD20', 'SUN1', 'TMEM59', 'THEM4', 'KCNA7', 'ZNF576', 'IRX2', 'ERCC6', 'ZP2', 'UBA6', 'A1CF', 'TRAT1', 'TP53', 'C9ORF85', 'ZNF518B', 'SLC43A2', 'BTBD8', 'MROH5', 'TSSC4', 'RNASE11', 'PYGM', 'WFDC10A', 'C7ORF61', 'ZNF92', 'PRDX6', 'F2', 'TACO1', 'OR7E156P', 'TMEM183A', 'QSOX2', 'MUC2', 'SMAD6', 'CRIP2', 'UCHL5', 'VWCE', 'RPS9', 'C9ORF153', 'ATP13A3', 'CPSF3L', 'ACTRT2', 'DCLK1', 'ADAM18', 'GALNT13', 'ZNF853', 'C15ORF61', 'PADI2', 'FGB', 'HOXB13', 'KRTAP19.6', 'TDRD5', 'TMEM18', 'IGF2', 'PDCL', 'CAV3', 'CHM', 'UNK', 'OR10X1', 'SFSWAP', 'GPR183', 'TRAM2', 'SNORD88A', 'COTL1', 'BTN2A2', 'TSHB', 'PCAT4', 'SPEF1', 'DNHD1', 'PRPF31', 'PFAS', 'MEX3D', 'XRCC6BP1', 'MAX', 'POM121', 'MAGEA6', 'NUMB', 'PTK6', 'IARS2', 'FBRSL1', 'POR', 'C6ORF48', 'ZNF687', 'MAGEB10', 'SMIM11', 'RNF113B', 'PDPK1', 'ANKDD1A', 'OOEP', 'SPACA3', 'CSN1S1', 'ATP1B1', 'GATA3', 'IDO1', 'TRAP1', 'EPHA6', 'CCBL1', 'GLS', 'PRSS55', 'EFHD2', 'GBP7', 'IFI27', 'MED11', 'FUT10', 'LRFN2', 'NDUFA10', 'OSGEP', 'QTRT1', 'MMP8', 'BACE2', 'CMTM8', 'FUNDC2', 'TRAPPC6B', 'RGN', 'NCAPD3', 'IFRD1', 'NUFIP2', 'LYN', 'BRD8', 'SHFM1', 'ARX', 'DCAF16', 'FCER1G', 'GYPB', 'OR2G3', 'LARS2', 'NUTM2F', 'DFFA', 'ITPKC', 'OR51S1', 'LUC7L3', 'MAP3K15', 'PIM1', 'TLN1', 'C1ORF123', 'DENND5B', 'XYLT2', 'SFRP5', 'CYP4Z1', 'MCTP1', 'HELT', 'GTF2E2', 'ZNF385B', 'LMF1', 'KLHL32', 'OPALIN', 'KRTCAP2', 'CELF4', 'DPM2', 'NEUROD6', 'CAMK2A', 'MUT', 'CACNB4', 'RAB3B', 'HPGDS', 'PDXDC2P', 'RPL35', 'SLC25A5', 'PCSK7', 'SNORD19B', 'GRB10', 'LPA', 'MPZL1', 'SPAG6', 'ARGFX', 'OR2Y1', 'CEMIP', 'EZH1', 'CD9', 'GAGE2B', 'NFATC2IP', 'C2ORF69', 'OR5AU1', 'PPIAL4E', 'TCAF2', 'PCYT2', 'WNK1', 'GOLGA8CP', 'SDHAF2', 'F8', 'MAGEA3', 'RABEP1', 'CT47A9', 'MSI1', 'NEURL1B', 'TRIM47', 'PRPF4B', 'DOCK3', 'ISM2', 'ZNF704', 'ZNF746', 'FKBP1A', 'RPL19P12', 'GPR107', 'OLFML2B', 'UTP18', 'ITPK1.AS1', 'SDHAP1', 'PTPN5', 'SLC7A3', 'CYP4B1', 'CECR5', 'CYP7B1', 'RRN3P1', 'IFT88', 'MIA3', 'KCNQ1OT1', 'CD3D', 'TMED10P1', 'MFSD7', 'PTGDR', 'LRIF1', 'TBC1D13', 'ICAM3', 'PIH1D2', 'ALG14', 'SNORD59B', 'LIMS3', 'IKZF2', 'TMC6', 'FABP6', 'LIG3', 'CSF3R', 'TCEB3C', 'TANK', 'LHX9', 'ANKRD50', 'TIMM17A', 'NKX6.3', 'SPRYD4', 'TXNDC15', 'LINC00471', 'MYO9A', 'CLDN20', 'LRRC71', 'SUDS3', 'SDHAF3', 'WTIP', 'TIAM1', 'B3GNT3', 'PGBD4', 'PTER', 'ARFGEF1', 'GBP6', 'CD248', 'CAB39', 'RER1', 'DEPDC7', 'GJA10', 'APOBR', 'SUZ12P1', 'GRPEL2', 'SEPT8', 'RFX7', 'TTC9C', 'WASH3P', 'SNORD46', 'CSTF1', 'OR4E2', 'DNAJB7', 'CLDN2', 'KLHDC8A', 'PPP1R9B', 'MCHR2', 'PPIL4', 'ZMAT2', 'UTP20', 'CYP21A2', 'SH3BGRL', 'OR52H1', 'GRAMD2', 'SRRM2', 'ZNF542P', 'SH3YL1', 'CTU1', 'ERBB2', 'CCNL2', 'ST3GAL3', 'MRPS35', 'RAB35', 'DMC1', 'SBDS', 'HERC3', 'RFC3', 'LRMP', 'OXTR', 'CTLA4', 'ULK2', 'PTCD1', 'KDM2B', 'COL8A1', 'CASK', 'TEX28', 'MAGED1', 'SPATA2', 'EVA1C', 'DHX38', 'GGT5', 'TMEM233', 'POTEE', 'KRTAP19.8', 'TMSB10', 'SOD3', 'NES', 'DAGLB', 'RPLP0P2', 'TTTY2', 'KLF14', 'CRLS1', 'SNX24', 'ODC1', 'C22ORF31', 'RPL9', 'WNK4', 'RNMTL1', 'FGFR2', 'TDGF1P3', 'ZNF432', 'FRY', 'LOC100129550', 'HNRNPL', 'C6ORF106', 'REL', 'OR1I1', 'ZPLD1', 'IQSEC3', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 0.8552070576779157 Spearman Correlation: 0.8135940322397595 Coefficient of Determination: 0.73132515147681 RMSE: 0.3261875022830804 NRMSE: 0.05100265847597223 MAPE: 411.6041422585542 Pearson Correlation: -0.08271005439264284 Spearman Correlation: 0.08458708961458374 Coefficient of Determination: -3.2553421658953594e+20 RMSE: 8497298618.944454 NRMSE: 2031582895.5540702 MAPE: 3850419440374.159 Predictor: ElasticNet Pearson Correlation: 0.5684540744302085 Spearman Correlation: 0.5353386796614499 Coefficient of Determination: 0.2788205640181425 RMSE: 0.5344111099534525 NRMSE: 0.08356048939933586 MAPE: 616.9162184103303 Pearson Correlation: 0.2274426855923942 Spearman Correlation: 0.2334617638623923 Coefficient of Determination: -0.03711179028958411 RMSE: 0.47961785761635556 NRMSE: 0.11466978855648534 MAPE: 122.47707360201592 Predictor: RandomForests Pearson Correlation: 0.5372885578388019 Spearman Correlation: 0.45574513008538514 Coefficient of Determination: 0.150779301902774 RMSE: 0.5799146714469884 NRMSE: 0.09067542357079014 MAPE: 401.3906332389264 Pearson Correlation: 0.188675266907433 Spearman Correlation: 0.2674977680472365 Coefficient of Determination: -0.016290330563055955 RMSE: 0.4747789501939748 NRMSE: 0.11351287481326802 MAPE: 95.5016255085003 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['FAM71E1', 'TRAF3', 'MUC5B', 'SNORA28', 'LYRM7', 'TBATA', 'MRGPRE', 'AADACL2', 'EIF1AX', 'TTC19', 'TINAGL1', 'NFXL1', 'PABPC1L2B', 'SNORA34', 'CCDC60', 'INTS7', 'TAF1L', 'OR1A2', 'FANCA', 'DUSP2', 'SEMA3B', 'C4ORF29', 'AGO1', 'C14ORF37', 'HIST2H3D', 'CDC42EP4', 'MTHFD1L', 'ZSCAN12P1', 'CDKN3', 'CFAP126', 'CD200', 'TTC39A', 'GOLGA3', 'C2ORF40', 'DSG3', 'MAPK11', 'SUOX', 'TOB2P1', 'RPS14', 'TMEM223', 'PIK3AP1', 'NF1', 'DHX15', 'STYK1', 'DNAL4', 'FAM167A', 'TMEM125', 'PCBP4', 'INTS4P1', 'CORO1C', 'IGSF11', 'CDC73', 'WRNIP1', 'CD244', 'LOC399815', 'KIAA0408', 'KLHDC8B', 'MGAT5', 'KRT12', 'SLC4A3', 'P2RX6', 'SNAR.E', 'ETAA1', 'DNAJA4', 'USP22', 'GDF7', 'PPP1R3F', 'ICA1L', 'BMI1', 'SERPINA3', 'LINC01001', 'RTN4RL1', 'DYSF', 'COG2', 'SMPDL3A', 'CCL7', 'TTC38', 'COL5A1', 'SNX13', 'ACYP2', 'FAF2', 'DNAAF3', 'SSX9', 'IGFL4', 'BCAS3', 'TCF15', 'RASA4', 'FAM41C', 'SNORD114.18', 'ZAR1L', 'IL4', 'NDRG2', 'CHGA', 'ADCY7', 'DEFB110', 'SNORD115.48', 'RBBP5', 'PTGER3', 'LOC100133331', 'ZNF48', 'ALG3', 'RPS26P11', 'C14ORF1', 'LINC00488', 'LINC00176', 'SAV1', 'ENKD1', 'OXSM', 'ITFG1', 'GAB3', 'MITF', 'MC1R', 'XPNPEP2', 'PWP2', 'ZNF257', 'WTIP', 'MSANTD3', 'PRAMEF22', 'GALR1', 'METTL23', 'EIF1AD', 'TKTL2', 'RBMY1B', 'EPHA8', 'RAD54B', 'TLR3', 'MFSD8', 'ARHGAP21', 'CES4A', 'NCR2', 'MAPK8IP1', 'CPLX2', 'PPP4R2', 'FURIN', 'SMIM7', 'SNORD45A', 'FLNB', 'TPBG', 'SLC6A17', 'RMI1', 'PRAMEF8', 'SLC35G2', 'CCDC85A', 'AASDHPPT', 'OR51B5', 'SH2B2', 'DUSP14', 'GPR19', 'OCM2', 'BTF3P11', 'CD300A', 'F2', 'SUGT1', 'GDAP2', 'CCDC181', 'LRRC1', 'SCN4A', 'MTCP1', 'TMEM218', 'POMGNT2', 'PRDM11', 'EGR1', 'ZNF83', 'KRT8P41', 'EGF', 'CUL2', 'ADGRF4', 'AMICA1', 'SLC30A2', 'ITIH2', 'BAG5', 'STAM2', 'SI', 'TARSL2', 'P2RY4', 'SEPT7P2', 'CT47B1', 'FAM43A', 'NDUFA13', 'CYBRD1', 'TPM1', 'DBI', 'SNORA38', 'TCAP', 'GPAM', 'ADAMDEC1', 'ST3GAL1', 'HIBCH', 'TPI1', 'SNORD59A', 'KRT222', 'TREML4', 'UBQLNL', 'DYNC1LI1', 'CARD16', 'MAF', 'RBBP4', 'CLN8', 'ZNF263', 'UTP6', 'ZNF285', 'SLFN13', 'SNORD9', 'LINC00998', 'C9ORF156', 'ABCA12', 'GEMIN5', 'CLDN1', 'LTA4H', 'CX3CR1', 'HCFC1R1', 'HMCES', 'FGD5', 'ALS2CR11', 'BCCIP', 'SCARA3', 'SMNDC1', 'CPEB3', 'PCOLCE', 'MAGEE1', 'TMEM207', 'PEX10', 'ATP6V1C1', 'UBAC1', 'CUEDC2', 'SMOC1', 'GAGE1', 'LOC100133920', 'GUSBP2', 'SLC35A5', 'PCDHGC4', 'LRIT1', 'CMTM4', 'SCGB1A1', 'IL22', 'BACH1', 'FOXO3', 'METTL11B', 'PDP2', 'CRYZL1', 'FAM212A', 'ROM1', 'NPHP1', 'G2E3', 'UNC93B1', 'ZNF687', 'DOK5', 'TTI2', 'SLC39A13', 'TSPAN6', 'CD68', 'PAK1', 'YBX2', 'NUPL1', 'RFPL3', 'TBPL2', 'DISC2', 'NINL', 'MRPL23', 'FOXL2NB', 'ZBTB10', 'LOC148696', 'ZNF236', 'STEAP1B', 'USP14', 'TIMM44', 'ITM2B', 'GAL', 'TINAG', 'OR1K1', 'PITHD1', 'SKINTL', 'WNT9A', 'CIAPIN1', 'SH3RF1', 'RANBP10', 'TPP2', 'MTFMT', 'METTL1', 'EYA1', 'ACSL1', 'ADM', 'NRIP1', 'COA3', 'LHX5', 'ELN', 'ZNF90', 'CRNN', 'STX10', 'PADI1', 'CYFIP2', 'PCIF1', 'NXF2', 'RPL12', 'CNTN4', 'PIGM', 'SPINK14', 'PLOD1', 'CNTRL', 'MARCH6', 'MCM2', 'SCOC', 'CDCA5', 'BCORP1', 'CP', 'LINC00917', 'YAF2', 'C8ORF82', 'CRELD1', 'PCDH15', 'TMX3', 'WNT8A', 'CCNH', 'MFSD4', 'FAM65A', 'RBM4', 'MPV17L', 'HIAT1', 'HPSE', 'C9ORF47', 'MGC16275', 'TEAD4', 'C9ORF171', 'DCBLD1', 'OSCAR', 'GPM6B', 'IL1RL1', 'NLRP6', 'HSCB', 'SLC2A14', 'SLC12A8', 'PDE9A', 'SLC4A2', 'NTN4', 'FIZ1', 'OR13C2', 'KLHL42', 'ZNF600', 'WDR37', 'FAM58BP', 'RSU1P2', 'SIRT6', 'NDUFB1', 'DDX20', 'ATG9B', 'MARCH9', 'NOL4L', 'TOPAZ1', 'SFPQ', 'KANK2', 'MED22', 'TMEM88', 'WNT2', 'PCDHA11', 'TMED5', 'CKS1B', 'GAB2', 'ZNF324', 'UGT3A1', 'BSPRY', 'ATG16L2', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.4899512556970232 Spearman Correlation: 0.48050458982691097 Coefficient of Determination: 0.04358400514968175 RMSE: 0.18586243790112103 NRMSE: 0.12526786583797553 MAPE: 356.67169849029125 Pearson Correlation: -0.05446327762322697 Spearman Correlation: 0.036463156524727515 Coefficient of Determination: -2.3585797457831666e+24 RMSE: 328855930284.34845 NRMSE: 226190379110.07605 MAPE: 117244973080685.75 Predictor: ElasticNet Pearson Correlation: 0.2805279277135273 Spearman Correlation: 0.26098076737881676 Coefficient of Determination: 0.04572115716354197 RMSE: 0.1856546630243842 NRMSE: 0.12512782939124917 MAPE: 132.29263100426755 Pearson Correlation: 0.04942121300866944 Spearman Correlation: 0.08952886372028622 Coefficient of Determination: -0.0012144440441508308 RMSE: 0.21426140514969358 NRMSE: 0.14737112515368672 MAPE: 122.89572526120492 Predictor: RandomForests Pearson Correlation: 0.43390004414415434 Spearman Correlation: 0.39561605598467564 Coefficient of Determination: 0.07709276664621179 RMSE: 0.18257749282530705 NRMSE: 0.12305387325459458 MAPE: 121.46914634436472 Pearson Correlation: 0.07248682302017366 Spearman Correlation: 0.09365952193917632 Coefficient of Determination: 0.003050012424422599 RMSE: 0.21380461816763388 NRMSE: 0.14705694252497362 MAPE: 114.18042885643143 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['GPR87', 'C20ORF195', 'TRPS1', 'ALDH5A1', 'PDCL', 'COPS4', 'LUZP1', 'SIAH3', 'SIL1', 'ALAD', 'BCL9', 'ABCA8', 'C4ORF33', 'ALX1', 'C11ORF80', 'GTF2H3', 'PVR', 'SIN3A', 'C16ORF82', 'KCNQ3', 'EHD1', 'GRM6', 'GTF3A', 'VBP1', 'SRCIN1', 'RFNG', 'GPANK1', 'CALCRL', 'CACNG3', 'PLA2G5', 'OR2W1', 'SYT6', 'GRM3', 'SLC9A1', 'MKI67', 'ARSJ', 'SLC25A5.AS1', 'FGD2', 'GOLGA6L5P', 'ZNF99', 'DMRT2', 'GNAS.AS1', 'PQLC2', 'USP2', 'NPHS1', 'OR51B6', 'GJA1', 'MYH2', 'SOX13', 'HDAC10', 'ATP6V1G2', 'MYO18B', 'ZBTB42', 'MS4A2', 'SH3D19', 'EIF4E1B', 'ETV3', 'LRRFIP1', 'DIP2B', 'NCSTN', 'MTMR8', 'DMRT3', 'RPL18A', 'KLHL2', 'TUBD1', 'FTHL17', 'ACVR2B.AS1', 'PTGES2', 'CAPN12', 'USP18', 'SLC27A4', 'TAS2R30', 'S100A16', 'ZNF740', 'SLC2A7', 'TLE6', 'RPLP0P2', 'RIPK4', 'OR2D2', 'IL6', 'COL1A1', 'JAM2', 'LOC100270804', 'SHC1', 'MYOT', 'TRUB1', 'ORMDL2', 'CLLU1', 'ICAM3', 'MYCNOS', 'ZMYM6', 'VN1R1', 'TDO2', 'PTCH2', 'WWC1', 'PARP14', 'CCDC129', 'MS4A6A', 'EYA3', 'DNAH8', 'NF1P2', 'NSUN6', 'DUOX1', 'HCG9', 'KBTBD6', 'GRIP2', 'LRIG3', 'BPNT1', 'KCNN4', 'COL7A1', 'WIBG', 'TRMT112', 'TMEM181', 'METTL21C', 'OR2C1', 'SEC63', 'KIAA1671', 'CDRT15', 'LSM14A', 'PDE1C', 'APOC3', 'NIPSNAP1', 'FANCL', 'ZNF578', 'TAF9B', 'PAFAH1B3', 'ZFYVE21', 'BRD7P3', 'TCAF1', 'RRM2', 'TRIM29', 'FAM72A', 'LMNB1', 'CTAGE10P', 'ZZZ3', 'TFCP2', 'SOS1', 'BCAS1', 'SCARB2', 'LINC00593', 'ALG1L2', 'SLC47A2', 'BCRP3', 'SQRDL', 'EXOC1', 'TRPC4AP', 'MANF', 'CYLC1', 'NDRG2', 'MRPL11', 'FAM167A', 'STK24', 'ATL2', 'EIF4EBP1', 'AGR3', 'CIB1', 'LINC00623', 'C16ORF90', 'MACROD1', 'AKR7L', 'CYP3A5', 'CCDC186', 'SNORD4A', 'PPOX', 'ZC3H12B', 'PIP5K1P1', 'XPR1', 'NPR3', 'PLGLA', 'FBXW8', 'TAS2R5', 'STX1B', 'TOP1P1', 'ARHGAP25', 'SMG8', 'ACOT1', 'COMMD4', 'TAP1', 'SMC2', 'PLP2', 'CYB561A3', 'SPDYE4', 'SMAGP', 'PPBP', 'CLDN23', 'PSAPL1', 'POTEC', 'OR6A2', 'ALG11', 'RAB3IP', 'CD163L1', 'TAS2R43', 'MSH5', 'ARL16', 'TTTY18', 'FSCB', 'UCP1', 'LEP', 'FMNL3', 'PRDM15', 'SLC27A6', 'TMEM170B', 'FARP2', 'PPP3CA', 'CAMK2N1', 'LINC01341', 'FCRL3', 'FRRS1', 'ZBTB16', 'BCLAF1', 'SNORD116.1', 'ZSWIM7', 'DNAJC22', 'TIGIT', 'C4ORF19', 'ZNF84', 'LRRC20', 'SEC23B', 'ELK3', 'C17ORF98', 'BACE2', 'USP32', 'TRAPPC2', 'HMP19', 'DNAJC21', 'CEP41', 'OR8J1', 'PNO1', 'ZSWIM8', 'C15ORF56', 'MAGEA3', 'LIG4', 'EXOC4', 'CMAS', 'ZNF569', 'ATP6V0E2.AS1', 'OR5AK2', 'CDC42EP5', 'LCE3E', 'NAT6', 'ALG12', 'TAS2R60', 'UBALD1', 'TTTY9B', 'C21ORF2', 'ZFP64', 'RDH16', 'WNT8A', 'ZNF433', 'ZIM3', 'LOC440461', 'LIN28B', 'AGK', 'SLK', 'OR2T10', 'ZMAT3', 'ZNF416', 'EDA', 'PRSS41', 'OCRL', 'VCP', 'CCDC137', 'SAMD1', 'UGT2B7', 'WDR24', 'LINC00483', 'NADSYN1', 'HOXD8', 'SSB', 'HPDL', 'PRR20B', 'RPL13AP17', 'RFTN2', 'CIAPIN1', 'LINC00471', 'LINC01102', 'MAGEC1', 'ZNF560', 'NCBP2.AS2', 'GLE1', 'TMEM30C', 'MCM6', 'SLC9A8', 'GATB', 'PCOLCE2', 'SSX4', 'LOC400043', 'TFG', 'GNB1', 'EPB41L2', 'HIST2H3C', 'RHOA', 'TXLNGY', 'SSH2', 'SNORD17', 'SYCP2L', 'RNF150', 'MS4A14', 'CAND1', 'TRIM14', 'C2CD4B', 'DUSP6', 'UBE3B', 'ABCC10', 'ARMC5', 'ADAM6', 'STAU2', 'PPP2R1A', 'OR2A14', 'MMEL1', 'CBX3', 'YAF2', 'PTAR1', 'SORBS1', 'DHFR', 'LEF1', 'TIMM21', 'XG', 'GRK5', 'GZF1', 'HAUS6', 'FUNDC1', 'FERD3L', 'MIEN1', 'WDFY4', 'SFT2D1', 'SNORD45B', 'PPP4R1', 'YWHAH', 'CEP72', 'DOPEY1', 'VWF', 'ACTL7A', 'BTG4', 'TYW1', 'OR10R2', 'TACC2', 'FCMR', 'ELP5', 'LINC00319', 'PCDHB7', 'C2ORF48', 'PLCB2', 'ASTL', 'DCTN1', 'GPR176', 'SNORD36A', 'PPBPP2', 'OGG1', 'CD163', 'ACMSD', 'TAMM41', 'MKNK2', 'KLK9', 'SERPINB7', 'SRSF2', 'TMEM187', 'OR5AN1', 'ZNRD1.AS1', 'TRANK1', 'ZNF689', 'IRGQ', 'SMIM14', 'PRICKLE3', 'XAF1', 'KIAA0408', 'LOC256880', 'ZNF788', 'SRP54', 'GTF2IRD1P1', 'RPL23AP53', 'DDT', 'VGLL4', 'TRIM37', 'ITGA11', 'TANGO2', 'RARA', 'HAS1', 'STK38L', 'HSPE1', 'SGPP1', 'LRRC4C', 'ATMIN', 'DOCK1', 'C14ORF28', 'PSMD11', 'CHST10', 'ACER2', 'DICER1.AS1', 'HRH1', 'ITGAL', 'PMP2', 'CD63', 'IL10', 'ZDHHC4', 'FXN', 'MBOAT2', 'AGTPBP1', 'EPO', 'CALML5', 'CETN4P', 'MBNL3', 'FBRS', 'SCGB1D1', 'DNM1P46', 'CASC5', 'CCDC153', 'RNF168', 'ACVR1', 'CYFIP2', 'ARHGEF15', 'PIK3C3', 'TMEM5', 'GGH', 'NCKAP1', 'OST4', 'BTN3A2', 'VCX', 'AATK', 'NDP', 'TPCN2', 'PEBP4', 'PGM5', 'CABLES1', 'BPIFB3', 'CLDN19', 'KLLN', 'EMILIN3', 'ZNF347', 'SRRT', 'NELFB', 'ADGRE4P', 'SMAP2', 'ILKAP', 'JDP2', 'PDE7B', 'RBM25', 'CPT1C', 'CHURC1', 'BRK1', 'SYNDIG1', 'CFL1P1', 'TSC22D3', 'SUV420H1', 'BCAR4', 'IGIP', 'ZAK', 'CASC2', 'IZUMO2', 'SPAM1', 'FBXO24', 'C11ORF49', 'MYCN', 'C5AR2', 'VPS26A', 'SEPT9', 'COG4', 'BRF2', 'ANKRD33', 'ARHGEF10L', 'OR10A4', 'MOV10L1', 'C9ORF57', 'HFE', 'NPAS1', 'PKD1', 'OSTC', 'KLHL36', 'CXCL8', 'CITED1', 'STRA8', 'EPHX2', 'SPTAN1', 'PHF21B', 'KRTAP10.4', 'ETFA', 'OR5B12', 'KLHDC9', 'LEUTX', 'UHRF1BP1', 'ZSCAN5B', 'COL4A6', 'IFITM1', 'CCR6', 'YWHAB', 'MTIF3', 'SNORD115.9', 'MTIF2', 'SDE2', 'BDH1', 'CDC20B', 'SS18', 'JRKL', 'INSL4', 'DCHS1', 'TXNIP', 'NRBP1', 'RGSL1', 'ANXA8', 'DYNLRB1', 'UBL3', 'TMBIM6', 'TREML5P', 'KIAA1467', 'HNRNPUL1', 'PAGR1', 'NPY', 'DBH', 'SNORD113.1', 'CYS1', 'EFNB2', 'PARD6A', 'PGAM5', 'RASAL2', 'VPRBP', 'CNGB1', 'MRPS35', 'MYO10', 'CCL28', 'HEXIM2', 'GPRASP1', 'HMGCL', 'IQCF6', 'HSPA13', 'ADGRE1', 'FETUB', 'EIF3B', 'IFRD2', 'PTMS', 'RHBG', 'KLF3.AS1', 'PIGO', 'RNF157', 'TNFRSF1A', 'KCNN3', 'GPHN', 'TRDN', 'DPY19L2P1', 'CAPZA2', 'ARID3A', 'CNN3', 'ROGDI', 'SULT2A1', 'CTSH', 'C17ORF89', 'STIM1', 'ADAT1', 'PSMA7', 'FBXW7', 'PPEF1', 'CCT3', 'OARD1', 'LSMEM2', 'RPS13', 'OR9A4', 'UCP2', 'CCDC51', 'CHDH', 'ABHD11', 'C9ORF163', 'SNORD113.7', 'TMEM59', 'EMILIN1', 'GPSM1', 'SUPT20HL2', 'VPREB1', 'ANKRD9', 'SPCS2P4', 'MED13L', 'NDN', 'C5ORF24', 'USP22', 'ACVR2B', 'PTPN1', 'CAND2', 'GDI1', 'ZFP92', 'GRM5', 'KCNC3', 'ADAMTS7', 'METRNL', 'ERGIC1', 'INTU', 'OSBPL2', 'NFU1', 'PDCD2L', 'IFNG', 'LINC01465', 'HADH', 'HIVEP3', 'SNX16', 'PI4KB', 'COX5B', 'KREMEN1', 'APOM', 'UBTFL1', 'PCBP2', 'ADHFE1', 'EPB41L1', 'UBC', 'C1QL4', 'RHNO1', 'DHCR24', 'COL11A2', 'FADS2', 'MYO3A', 'FOPNL', 'VCY', 'LRFN4', 'UCHL5', 'DOK6', 'PHIP', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.698941934684303 Spearman Correlation: 0.655702242035047 Coefficient of Determination: -0.731838746552546 RMSE: 0.8785415159227115 NRMSE: 0.20511335354938165 MAPE: 912.6505710261391 Pearson Correlation: 0.014473664408557988 Spearman Correlation: 0.19928450222443153 Coefficient of Determination: -2.2157413504567528e+24 RMSE: 977285656913.4978 NRMSE: 301715185364.29803 MAPE: 171260568609116.4 Predictor: ElasticNet Pearson Correlation: 0.6121568707589156 Spearman Correlation: 0.5383834176412071 Coefficient of Determination: 0.34628379371929385 RMSE: 0.5397630970039065 NRMSE: 0.12601865357767708 MAPE: 369.0787934422598 Pearson Correlation: 0.3041383419555861 Spearman Correlation: 0.3099514956545593 Coefficient of Determination: 0.07631491432334159 RMSE: 0.6309921542433387 NRMSE: 0.19480477732806603 MAPE: 142.24742307861743 Predictor: RandomForests Pearson Correlation: 0.526094602031717 Spearman Correlation: 0.43102367422119664 Coefficient of Determination: 0.21910082564187272 RMSE: 0.5899375564462683 NRMSE: 0.13773289980534842 MAPE: 259.6032188882655 Pearson Correlation: 0.29590555658859324 Spearman Correlation: 0.20125265440430948 Coefficient of Determination: 0.08429436665782486 RMSE: 0.6282607617797309 NRMSE: 0.19396152072480963 MAPE: 127.30259704218622 Protein: TP53 x_train_column_count: 1002 x_train columns: ['SBDSP1', 'TXNDC15', 'NOP56', 'CCDC69', 'ZNF433', 'IDE', 'FAM204A', 'FGF7', 'TBC1D2B', 'RPP21', 'ANGPTL1', 'SS18L1', 'TMEM161B', 'WBP2NL', 'APOL6', 'WNT6', 'CBX1', 'OR2T35', 'ITGA6', 'PALD1', 'DCUN1D5', 'RNASEH2A', 'METTL24', 'KATNAL2', 'HNRNPC', 'TSC22D4', 'ERAS', 'CEP97', 'GIMAP2', 'TMIGD2', 'ATP6V1C2', 'QPCT', 'LOC283332', 'NID2', 'TCF12', 'FAM126A', 'FUS', 'SLC22A20', 'LRRC75A', 'TM6SF1', 'DNAJB1', 'HOXA11', 'MS4A14', 'NUTF2', 'ZG16B', 'EXOSC7', 'MAD2L1BP', 'PINK1', 'DNAH3', 'PRAMEF4', 'UBE2F', 'C16ORF54', 'ZNF525', 'ZNF101', 'TGFB1I1', 'ARRB2', 'ITGB1', 'TAF15', 'TNRC18', 'CCDC183', 'PTPRN2', 'MBLAC2', 'TEKT1', 'ASXL3', 'GALR1', 'TOMM7', 'NSA2', 'WTAP', 'ZFX', 'CEP44', 'C1ORF111', 'FAM169B', 'GPR52', 'BPIFA2', 'ANKRD66', 'MPP4', 'GSDMB', 'CHCHD10', 'KC6', 'CCBL1', 'KCTD16', 'PSMB2', 'CDKN2AIP', 'KAT6A', 'MARCH6', 'EXOSC1', 'UGT1A6', 'LINC01588', 'HAGH', 'SYS1.DBNDD2', 'FABP5', 'PDE7B', 'OTUD7B', 'GJA3', 'KRTAP19.7', 'CDC16', 'MAP3K5', 'DIRAS1', 'ESYT3', 'LUZP2', 'CELF6', 'GNMT', 'SPIN3', 'ZDHHC5', 'LOC400736', 'ACTA1', 'MESDC2', 'UBN1', 'TMEM86B', 'MT1E', 'BATF2', 'SPAG4', 'GCNT7', 'ARHGEF15', 'GIT1', 'IQCC', 'NOX4', 'CDC42SE2', 'C9ORF173', 'CHRFAM7A', 'IKBKG', 'LOC493754', 'CPOX', 'BEST2', 'RNF185', 'GC', 'NRM', 'MYL6B', 'ARSJ', 'TCEB2', 'IL27RA', 'HSPA6', 'SCARNA23', 'GUCY1A2', 'RAX2', 'YPEL4', 'FAM47C', 'TMEM69', 'GOLGA8F', 'IRGM', 'KIAA0754', 'PP7080', 'AKIRIN2', 'UGT2B11', 'MRGPRD', 'EPHA1', 'PLEC', 'S100A9', 'OR4X1', 'UQCRHL', 'CABYR', 'ARL15', 'MTMR2', 'SLC8A1', 'ADAM9', 'NME4', 'ZFAND5', 'NUCB1', 'OR4C16', 'NR2F6', 'SNORD116.8', 'GGT1', 'OSR1', 'ZNF16', 'HHIP', 'DEDD2', 'ABCD2', 'HEXIM1', 'PPM1A', 'SLC12A2', 'ZNF805', 'SLC16A4', 'PIGP', 'LRRN4', 'ADH4', 'EFHC1', 'ZSWIM3', 'AURKB', 'ZKSCAN1', 'CSN1S2AP', 'RASL12', 'NFE2L3P2', 'TFAP4', 'RBMY1E', 'FABP9', 'C17ORF50', 'SOX8', 'QSOX1', 'STK17A', 'MYCL', 'ZNF608', 'APH1A', 'STEAP1B', 'YIPF4', 'TMEM189', 'SMG6', 'KLC4', 'KCNS3', 'MMS19', 'WASF2', 'THAP1', 'KRT37', 'C3ORF35', 'ZADH2', 'PPIF', 'RASGRP3', 'MAGEA5', 'CTSZ', 'GIP', 'CIRBP', 'HES4', 'FIG4', 'PCDH9', 'ZNF154', 'DHX57', 'AP3S2', 'GJD4', 'TMED8', 'MAGEA4', 'RASGEF1C', 'TKTL2', 'GLIDR', 'TOP1MT', 'MEP1A', 'WIPF1', 'STRN3', 'SNORA36C', 'HLF', 'TTYH1', 'SLC35E3', 'SHE', 'PPAPDC3', 'KIF1BP', 'VPS54', 'ZNF879', 'FAM183CP', 'SNORD32B', 'NFE2L3', 'FOXP1', 'NIPAL4', 'TAS2R46', 'TOP2B', 'SYNPO', 'GIPR', 'SCG5', 'LRRC37B', 'SLC10A1', 'ARL14EP', 'SMIM19', 'MTAP', 'ZNF561', 'PRSS42', 'TIMM21', 'SZT2', 'NAP1L6', 'LRRTM2', 'LINC00469', 'RNF19A', 'TACC3', 'SV2C', 'CAV1', 'DYX1C1', 'OR6S1', 'FAM124A', 'NARF', 'CADPS', 'IFNG', 'SYPL2', 'RAB8B', 'CATSPER3', 'FAM173A', 'LOC284661', 'EIF2B5', 'ARIH2', 'PRAMEF14', 'CTSW', 'OR52B6', 'LBH', 'SNORD29', 'OCIAD1', 'AUP1', 'BEX5', 'EFNB2', 'PI4KB', 'CYP2A6', 'MAFG.AS1', 'LOC152225', 'HERC2P2', 'ALG9', 'CCDC142', 'OR1N2', 'TMEM38A', 'DTX3L', 'VCP', 'C1ORF189', 'SLC6A20', 'MYLK4', 'TBL1X', 'SPTBN5', 'NOP10', 'ZSCAN22', 'EGR3', 'LMO3', 'FOS', 'IL21', 'WDR87', 'NPTX2', 'DCLRE1B', 'N4BP2L2', 'HSDL1', 'KCTD9', 'GSTA2', 'NOSIP', 'ZPLD1', 'MLF1', 'FAM182A', 'FRA10AC1', 'CEP112', 'GAS2L1', 'CCDC42', 'OR2B6', 'PIGN', 'SRXN1', 'NDUFB11', 'PDE3A', 'C1ORF116', 'MED18', 'SLC1A2', 'NKX6.1', 'PAGE2', 'RYK', 'AADAC', 'ALDH18A1', 'OAZ3', 'POF1B', 'TREML2', 'PTCHD2', 'ZNF580', 'BUB1', 'DYRK4', 'NT5M', 'INTS3', 'GRAP', 'CEBPD', 'IP6K2', 'GDF3', 'PCDHB7', 'LOC100132287', 'LCE2B', 'RHOG', 'PRTN3', 'DHFR', 'AMHR2', 'WBSCR28', 'CELF3', 'LTBR', 'RCAN3', 'LRRTM3', 'KCNV1', 'A2M.AS1', 'MRPL44', 'ZIC3', 'DPH5', 'ELN', 'PSIP1', 'HMBOX1', 'KDM8', 'DNAJC27', 'ENOX2', 'SPATA31D5P', 'ZBTB9', 'GPR62', 'TRIP10', 'HLA.DRB5', 'NUDCD2', 'NFKBIB', 'TMEM181', 'FAM84A', 'PDIA5', 'MS4A4A', 'OR1L1', 'PAX5', 'RNF220', 'TTTY23', 'EIF4EBP3', 'SRGN', 'TST', 'NEU1', 'REEP1', 'LINC00476', 'HOXB8', 'CACNG6', 'TTC33', 'TBCD', 'SPP1', 'HIGD2B', 'C17ORF53', 'PPM1G', 'COL26A1', 'TMEM176A', 'CKAP2L', 'SLC16A2', 'TAAR6', 'OR4D6', 'SMARCAD1', 'FAM83G', 'PTPMT1', 'MKKS', 'RPAP1', 'RNF222', 'CEP126', 'ZNF140', 'NIPBL', 'SP5', 'LOC340017', 'ST6GAL2', 'NF1P2', 'SP140L', 'ABL2', 'BCAS4', 'FOXO3', 'BRINP1', 'ATXN3', 'PVRIG', 'SKOR1', 'ITGA5', 'MUSTN1', 'WDFY4', 'GAS1', 'TMCO3', 'CLCN1', 'SH3PXD2A', 'INSC', 'TRAPPC6A', 'IGFBPL1', 'EMD', 'ALPK3', 'FHL3', 'RAB8A', 'G6PD', 'BLMH', 'DTHD1', 'PTDSS1', 'SETD8', 'SPATA24', 'FBXL19.AS1', 'BAP1', 'AZIN2', 'TFAP2C', 'CATSPERD', 'PTPN7', 'VRTN', 'RAPGEF3', 'NCF1C', 'DNASE1', 'SNORD114.21', 'LANCL1', 'TAF10', 'PRR34.AS1', 'DRAM2', 'OR10R2', 'NKTR', 'PDE6C', 'SLC9A4', 'CCDC88C', 'LOC647859', 'TMEM8B', 'SLC45A2', 'SNORD115.3', 'CA7', 'TMED3', 'HSPB7', 'YTHDC2', 'PTP4A3', 'ACLY', 'LGALS13', 'FAM183B', 'ZNF223', 'CCDC85C', 'WWC2', 'NCOA1', 'HIST1H2AH', 'ABHD4', 'ZBTB33', 'MYL2', 'GALNT11', 'IFNA13', 'USP44', 'TMEM52', 'PSMD5.AS1', 'TAPBPL', 'RNF43', 'SHISA6', 'PSMA8', 'SPG20', 'ABCD3', 'IQCF3', 'CBX6', 'TDRP', 'TACSTD2', 'DAZL', 'GALNT16', 'SNORA28', 'SEZ6L2', 'PCDHB15', 'USP17L6P', 'MAPK8', 'NPNT', 'MSI1', 'CHRDL1', 'STEAP2', 'TRAPPC2B', 'HAO2', 'LINC00598', 'LINC00470', 'APBB2', 'PAFAH2', 'HAPLN1', 'APLF', 'MIR155HG', 'NPM3', 'SESN2', 'PRG1', 'NPEPPS', 'MAPK8IP1', 'RPS6KA4', 'CDHR2', 'KRTAP19.2', 'IFNB1', 'HARS', 'ADORA2A.AS1', 'TMEM114', 'C8ORF76', 'TTTY17B', 'UTF1', 'OR2L1P', 'PTGER2', 'CNTN6', 'SPNS1', 'MPO', 'MRPL36', 'DCD', 'DAD1P1', 'HRG', 'OPALIN', 'FGF11', 'CHKA', 'EIF3B', 'C10ORF105', 'PTRH2', 'LGALS8', 'SNORA31', 'TIMM44', 'PUM1', 'SYN2', 'UBASH3B', 'GALNT4', 'QSOX2', 'TNFRSF21', 'STK16', 'FTHL17', 'RIPK2', 'ANKLE1', 'ZXDB', 'PALLD', 'SLC46A3', 'MRPL23', 'PCDH17', 'MICAL1', 'GREB1L', 'PF4', 'PCYT1B', 'SFMBT1', 'ZNRF2', 'C11ORF68', 'LINC00312', 'CTNND2', 'SCO2', 'TNFSF12.TNFSF13', 'C6ORF141', 'DR1', 'RRAGC', 'TMEM30A', 'CBLN4', 'OR56A3', 'ATG5', 'SNORD115.48', 'ZNF808', 'SYNGR2', 'BLVRA', 'PCDHA6', 'SHROOM1', 'GRIN3A', 'UNCX', 'TMEM200B', 'SLC5A9', 'EBP', 'MFSD8', 'PPP2R2D', 'BAALC', 'GAB2', 'R3HDML', 'SENP1', 'KCMF1', 'SLC25A36', 'SH2D6', 'PSD3', 'DNMBP.AS1', 'LINC01465', 'NUTM2G', 'DUSP15', 'FOXD4L1', 'LINC01105', 'NME7', 'CTCFL', 'CPQ', 'KYNU', 'TUSC7', 'LYPLA2', 'TMEM143', 'ZNF138', 'PHF2', 'MDH1B', 'LINC00589', 'HENMT1', 'C19ORF57', 'RYBP', 'LINC00167', 'PRSS36', 'TRA2A', 'LYRM2', 'NRK', 'LRRK1', 'OR4D5', 'SGK3', 'C12ORF57', 'MTFP1', 'LDHC', 'AXIN1', 'KRTCAP3', 'GYG2', 'CDK5R1', 'GNPTAB', 'ASAP1.IT1', 'TTK', 'ALG8', 'KLHDC4', 'EHMT2', 'SERHL2', 'NKX3.1', 'NUFIP2', 'GRAMD1A', 'MT3', 'VDAC1', 'HPCAL1', 'FAM86C2P', 'MTHFD2', 'DPYSL2', 'LAS1L', 'HTR2A', 'H1FX.AS1', 'IHH', 'PRODH2', 'FAM155A', 'C3ORF17', 'METTL4', 'PES1', 'KIAA0753', 'MMP10', 'OR7G2', 'ZNF552', 'PXYLP1', 'CDHR5', 'FAM21A', 'TECPR2', 'SVEP1', 'GPATCH3', 'MUT', 'TMEM236', 'RIOK1', 'POLD1', 'MTO1', 'CYP2C9', 'HDAC6', 'UBR5', 'TLE1', 'C14ORF166', 'FBXO36', 'GALK1', 'OR4D11', 'FOXK1', 'RPS6KA5', 'WFDC10B', 'MRPS15', 'BAX', 'RLN1', 'TOPORS', 'SLC6A11', 'STT3B', 'CCDC103', 'PCDH11X', 'UBL4A', 'LY86', 'MECR', 'SLC6A4', 'GPRIN2', 'FERD3L', 'CAPN15', 'PA2G4P4', 'TUBD1', 'GP1BA', 'MTMR12', 'ATP6V0C', 'STARD13', 'TXLNGY', 'ATAD5', 'SLC2A3', 'TTC31', 'DNAJB8', 'SNX27', 'GOLGA6L5P', 'OR5H6', 'TBC1D3B', 'RHOBTB2', 'EDA', 'EIF3CL', 'PRICKLE4', 'BMS1P5', 'FAM129A', 'MAGEB18', 'TECR', 'CTNS', 'OR10X1', 'MASTL', 'IL36B', 'MTHFSD', 'PREX1', 'LINC00111', 'DDB1', 'HNMT', 'GPR150', 'LOC100190940', 'PLSCR2', 'ULK1', 'CYTH2', 'BVES', 'PPIAL4G', 'GEMIN5', 'FN3KRP', 'TPM2', 'GPR19', 'PDZD8', 'FCGR1B', 'TMCO4', 'ATF6B', 'CCDC121', 'MYO15A', 'GRB2', 'TEX15', 'FOXJ1', 'PIPOX', 'TCP10L', 'PRKCG', 'BRMS1L', 'ZNF19', 'SNORA41', 'ANKRD34C', 'ZCCHC6', 'LSM2', 'OR5A1', 'PPT1', 'ARRDC3', 'OR2T2', 'JADE3', 'LINC01366', 'MOSPD1', 'ERI1', 'APIP', 'RPS6KC1', 'RAB7A', 'AMELY', 'TLE3', 'IL3', 'LOC285074', 'OR6F1', 'VLDLR.AS1', 'PNPLA3', 'SLC28A1', 'TRIM47', 'CAAP1', 'CRTAP', 'KIAA1324', 'UPF3A', 'YIF1A', 'VAMP8', 'NR5A1', 'LRRC75B', 'SLC25A20', 'MAN2C1', 'LINC01600', 'C1ORF210', 'MUS81', 'FAM214B', 'GTPBP6', 'CFP', 'C20ORF27', 'TRIM26', 'ZNF579', 'SGPL1', 'KRTAP26.1', 'KIF16B', 'PAIP2', 'LOC401127', 'CHTF18', 'CNBD1', 'LRRC37A6P', 'CH25H', 'OS9', 'LOC389705', 'ZNF773', 'PAK2', 'SERF2', 'LPAR6', 'FLJ42627', 'YRDC', 'TMEM198', 'CHRM4', 'RPL11', 'TLL2', 'F2R', 'ASB13', 'CLASRP', 'RHOBTB1', 'NRADDP', 'PLEKHA7', 'TCEAL5', 'SSB', 'GRASP', 'CES1', 'CYP4F12', 'KRTAP15.1', 'RGAG1', 'DENND5B', 'HNF1A', 'AGBL5', 'KRTAP5.1', 'KCNK10', 'DXO', 'WNT8A', 'TSPAN33', 'KCNA1', 'SNORD115.27', 'TIGD2', 'SLC25A19', 'SYAP1', 'KHDRBS2', 'CXORF51A', 'PHF7', 'ZNF709', 'LGALS14', 'BCL2A1', 'DNM1P35', 'CT45A2', 'TGM3', 'TXNRD1', 'FASTKD5', 'DICER1', 'C16ORF52', 'C9ORF117', 'FIGLA', 'DLX4', 'RPN2', 'SLAMF6', 'C19ORF60', 'YME1L1', 'PITPNC1', 'WDR12', 'SOX13', 'GJB7', 'SOS2', 'VCPKMT', 'RPS13', 'ANKRD6', 'ZNF765', 'CILP', 'LSM3', 'CERKL', 'SNORD115.5', 'ZNF157', 'MEX3A', 'GJC3', 'DCAF12', 'C1ORF64', 'PYGO1', 'VPS45', 'GAGE8', 'TEX2', 'PODXL', 'BRD2', 'SLC19A2', 'CEACAM1', 'DDX28', 'KRT71', 'GXYLT1', 'STS', 'PNISR', 'DNAJC17', 'AKAP9', 'C11ORF52', 'FAM83A.AS1', 'CLCC1', 'ZNF79', 'LAIR2', 'TDRKH', 'BUD13', 'C6ORF132', 'CCDC84', 'BET1', 'TBC1D2', 'SDPR', 'MAP3K12', 'LOC441204', 'GOLPH3', 'PGLYRP4', 'DSCR10', 'SERPINB1', 'LETM1', 'FAM138E', 'KCND1', 'ALX3', 'DNAH6', 'OR1E2', 'OR7D2', 'UCP1', 'FAM207A', 'PSMC6', 'SCARNA5', 'ULK4', 'OR51B6', 'NANOGNB', 'AJUBA', 'DCHS1', 'MESTIT1', 'TIPIN', 'RPRM', 'PPM1N', 'TGFA', 'RALGAPA2', 'LAPTM4A', 'OR52J3', 'MTCH1', 'ARMCX3', 'ZMYM4', 'CHST5', 'BBS9', 'POU6F2', 'ATP5B', 'CD37', 'SEMA7A', 'UXT.AS1', 'PPP1R2P3', 'ZFP1', 'ZNF131', 'MUCL1', 'OR51D1', 'PI4K2B', 'MRRF', 'FIGNL2', 'SLC26A6', 'LOC100130691', 'SNORD116.20', 'ORC3', 'LGMN', 'HDAC11', 'SNORA70C', 'ZC3H12D', 'CD226', 'BCL3', 'KIR2DS4', 'VNN1', 'C19ORF53', 'FAM101B', 'C11ORF63', 'PRR15', 'PACS1', 'IZUMO1R', 'DPY19L3', 'USH1C', 'SMIM10', 'PITX3', 'KIAA1033', 'UNC79', 'RAET1G', 'SPOP', 'EPHX3', 'DNM2', 'MORN5', 'ZNF396', 'WDHD1', 'GTPBP2', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.8830920125739036 Spearman Correlation: 0.8276326814811921 Coefficient of Determination: 0.7798491299267036 RMSE: 0.21119399819802584 NRMSE: 0.050755587166072064 MAPE: 426.1852757251736 Pearson Correlation: -0.0639572121924445 Spearman Correlation: 0.08602850409606107 Coefficient of Determination: -3.063742931836176e+19 RMSE: 2382578375.9460855 NRMSE: 888461520.8864877 MAPE: 551398011325.1691 Predictor: ElasticNet Pearson Correlation: 0.5596485173626847 Spearman Correlation: 0.5222415076505037 Coefficient of Determination: 0.2881236062454634 RMSE: 0.3797726323208383 NRMSE: 0.09126955835636585 MAPE: 771.8471286208129 Pearson Correlation: 0.3938339104256331 Spearman Correlation: 0.4260078055836108 Coefficient of Determination: 0.1496580314507452 RMSE: 0.39693358057734673 NRMSE: 0.1480162064136223 MAPE: 428.8664264687586 Predictor: RandomForests Pearson Correlation: 0.49497900740373196 Spearman Correlation: 0.5036945205817287 Coefficient of Determination: 0.2354852519293278 RMSE: 0.39356303663271835 NRMSE: 0.09458376270913683 MAPE: 764.5536465620842 Pearson Correlation: 0.333094857801484 Spearman Correlation: 0.3875597531692435 Coefficient of Determination: 0.08990018967301439 RMSE: 0.41064406142841986 NRMSE: 0.1531288334700953 MAPE: 423.70815611703944 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['FCGBP', 'ALOX12P2', 'ANXA9', 'IL1RL2', 'CRAMP1L', 'CENPB', 'HOXA9', 'NKD1', 'MAGOH', 'XIRP2', 'NKAIN4', 'ATG4C', 'FBLN7', 'OR2M4', 'CALCOCO2', 'PSAT1', 'MYLK2', 'MPV17L', 'CDK1', 'CLK4', 'OR4M1', 'RASGEF1B', 'NRXN1', 'MAP2K1', 'WBP1', 'FERMT2', 'VPRBP', 'A2M.AS1', 'GDF6', 'PLEKHH1', 'PWWP2A', 'DOK1', 'GJB2', 'JAKMIP1', 'ZNF678', 'SLC35G3', 'MAGEA12', 'OLFM3', 'OR4K15', 'PIGR', 'MVP', 'NR2E3', 'FSTL1', 'ZNF341', 'CD5L', 'CASC8', 'TRNT1', 'RTP2', 'FCER2', 'OR6V1', 'OR52W1', 'LHPP', 'PTK6', 'LRRC25', 'MYO1C', 'SNHG5', 'RBM15B', 'CCDC185', 'SNORD113.6', 'PFKFB4', 'RPP25L', 'CHI3L2', 'UCN2', 'DEFB114', 'TEKT4', 'BMP6', 'MRPL52', 'ELOVL1', 'TTC7B', 'SACM1L', 'DMRT1', 'ALG9', 'SNORD6', 'SLC30A8', 'SOX18', 'EVA1B', 'PLK5', 'SMIM20', 'ZNF778', 'UBE2M', 'METTL21B', 'ANP32AP1', 'SRFBP1', 'RAB38', 'CTNNA1', 'ARMC1', 'PNLDC1', 'LRP2', 'FJX1', 'NME1', 'GCSAML.AS1', 'NDUFA7', 'TEAD3', 'PRICKLE4', 'ARID2', 'TMPRSS13', 'H2BFWT', 'FYB', 'C16ORF91', 'FAM106CP', 'RSPH14', 'FRMD1', 'TMPRSS11D', 'KCNF1', 'SNORD79', 'BST2', 'FUT2', 'PNPLA1', 'ACBD7', 'LINC00893', 'FAM92A1P2', 'TMEFF1', 'LINC00592', 'AARS2', 'MAGEB3', 'SULF2', 'OPN3', 'FAM95B1', 'GTPBP8', 'ACOT13', 'ITGAX', 'TMEM170B', 'SLC39A3', 'FAM195A', 'ITPR2', 'UPP1', 'HSPB11', 'LOC441666', 'USP48', 'GPHN', 'HGFAC', 'CCDC73', 'RHOA', 'USP42', 'TMEM217', 'NAGLU', 'DNAJC25.GNG10', 'L2HGDH', 'PGGT1B', 'BDH1', 'CHAF1A', 'ZNF382', 'STX17', 'FRMD6', 'AFAP1.AS1', 'LDLRAD3', 'SMARCA5', 'MPHOSPH9', 'AIP', 'RGS16', 'SLC11A1', 'MYH10', 'ZYX', 'PARP15', 'DENR', 'CSNK2A3', 'PNISR', 'DOK2', 'LINC01547', 'AADACL3', 'SLC35A1', 'CHAC2', 'ZNF334', 'RDH5', 'TIMD4', 'SIPA1L3', 'SH3BP2', 'THOC5', 'CCL18', 'TXNDC9', 'SLC7A5P1', 'SLC1A6', 'SLC30A7', 'GNAI2', 'ATP6V0D2', 'PPAPDC1B', 'ZNHIT2', 'C21ORF91', 'SLC24A5', 'PEX12', 'AOX1', 'TNNT2', 'SNX17', 'MEA1', 'LGSN', 'FAM47E', 'STOML2', 'RHBDD2', 'APOA2', 'LBR', 'MTRF1L', 'KISS1R', 'SFXN2', 'PRPF4', 'PLEKHD1', 'LRRC45', 'DKK2', 'SLC2A4', 'FAM204A', 'CFHR4', 'TFPT', 'RGPD8', 'DACT2', 'LIN7B', 'OR4N2', 'RPL11', 'NEK4', 'HEATR5A', 'BTF3L4', 'LDOC1', 'LOC388242', 'ACAN', 'MYH3', 'DCDC2', 'TROVE2', 'CRYBA2', 'DGAT2', 'ASIC4', 'CDK19', 'C3ORF84', 'SULT1C3', 'COX7B2', 'IL11', 'GIGYF1', 'EDEM2', 'NCAM1', 'CORO7', 'C17ORF97', 'CNNM4', 'KATNB1', 'NAA20', 'SLC39A11', 'TTC29', 'OR2F2', 'RNF219', 'ZNF653', 'OR2A9P', 'IL13', 'C4ORF50', 'CNTROB', 'PROSER3', 'DSTN', 'TTC39B', 'PAX7', 'AATBC', 'ERCC1', 'TYK2', 'MFRP', 'OR1N1', 'CXORF36', 'PBXIP1', 'PHYHIP', 'SLC15A2', 'HCG18', 'ZNF813', 'ITGB7', 'IL1RAPL2', 'CPTP', 'NAT16', 'LSM3', 'RPL3L', 'SOX3', 'RAB22A', 'MSGN1', 'ENG', 'IPW', 'FMO1', 'FBXL22', 'TNFAIP8L2', 'NLRP1', 'TCL1A', 'DPP9', 'LRFN1', 'DEGS1', 'FIGF', 'TMPRSS11B', 'SPDYE5', 'CBX4', 'IHH', 'ARCN1', 'RNF141', 'DACT3', 'CNGB3', 'API5', 'AJUBA', 'ZNF626', 'DNASE1L3', 'SLC25A18', 'FSCB', 'ASB13', 'GOLGA2P6', 'PDIA5', 'SLC2A13', 'SPATA45', 'REPS2', 'BCL11A', 'EPHA5', 'PSG6', 'CXORF40A', 'PRDM12', 'XKR4', 'SNRPF', 'SLC6A17', 'UPRT', 'METAP1D', 'CCKAR', 'DZIP1L', 'PCDHB5', 'HPCAL4', 'FREM1', 'TSPYL4', 'HSPB7', 'PITRM1', 'NUDT18', 'CLEC2D', 'ACACA', 'ZNF213', 'SNORD19B', 'C1GALT1', 'SFR1', 'DHX37', 'EWSR1', 'PTGES2.AS1', 'RPE', 'TRIM28', 'MAP6', 'GDPD5', 'TRIM37', 'EFR3B', 'SCLT1', 'ACTBL2', 'PCBD2', 'C4ORF22', 'TLR8', 'PAX4', 'PRKD3', 'PTP4A2', 'ZNF611', 'C1ORF100', 'PROS1', 'WISP2', 'PRRC2C', 'FBXO44', 'MRPL46', 'NME1.NME2', 'ELL3', 'STRAP', 'AKR7A3', 'NBPF9', 'TBC1D5', 'NPS', 'CD40', 'TNFRSF14', 'CHD4', 'NT5DC3', 'P2RY12', 'CDK17', 'ST3GAL1', 'ARHGEF19', 'DPH3P1', 'GOLGA2P7', 'NBPF22P', 'AADAT', 'GDE1', 'RAB3C', 'UBQLNL', 'TAS2R19', 'PPP2R1B', 'CADM3', 'MOSPD1', 'SIX1', 'LCMT1', 'INTS4P2', 'PDE1B', 'SMPDL3B', 'PDZRN3', 'FBXO48', 'RPUSD2', 'MAP4', 'SLX4', 'LIN28B', 'PCDHB2', 'MAGEB2', 'SLCO6A1', 'FOXC2', 'ZDHHC21', 'ZCCHC12', 'OR2A2', 'TRIM35', 'PARK2', 'DPH1', 'OR5W2', 'PRAMEF10', 'ESPNL', 'HIST2H2BF', 'EDEM3', 'TPPP3', 'PLA2G2F', 'COL6A4P2', 'ETAA1', 'F3', 'ZNF677', 'TRIM17', 'ABCF1', 'SVIP', 'RAB9B', 'POLR1B', 'TIMM9', 'TEX14', 'APOA1', 'C17ORF75', 'MCM7', 'ECI2', 'TRAF3IP2', 'GJA9', 'OSTN', 'FRMD4B', 'R3HDML', 'EEF1E1', 'OR52B6', 'FAM162B', 'RBM34', 'MMD2', 'HEATR4', 'FOXA2', 'KRTAP5.4', 'ZBTB22', 'SERTAD4', 'TBP', 'JHDM1D.AS1', 'SLAIN2', 'SRSF2', 'PPP6R3', 'PRMT2', 'TMEM155', 'AGAP11', 'SMAD9', 'DKFZP434J0226', 'RAX', 'FAM160B2', 'INSL3', 'GPR173', 'CRBN', 'SFMBT1', 'MCPH1', 'TPM3', 'MMP13', 'C11ORF96', 'OR51G1', 'OR13C4', 'ATF7IP', 'HIST2H2BA', 'C16ORF82', 'HMG20B', 'SPA17', 'OTUD6B', 'OR8G2', 'PSKH1', 'UNC119', 'RAB11FIP5', 'KLF3.AS1', 'CHMP1B', 'RAB8A', 'SVIL', 'ART5', 'HILS1', 'SMAD5.AS1', 'DGKQ', 'OR5B12', 'RSRP1', 'STRC', 'GTF2H4', 'ASF1B', 'LIPM', 'PHKB', 'MGC2889', 'LMX1A', 'INTS7', 'IMMT', 'DLD', 'LANCL2', 'C11ORF52', 'C1ORF68', 'TM2D3', 'RHPN2', 'ADAT3', 'PIK3C2B', 'OPN1SW', 'C7ORF72', 'BASP1', 'ZNF184', 'BTN2A1', 'ARF4', 'ZNF667', 'PAIP1', 'SDR42E1', 'CCDC103', 'MCTP2', 'IFT57', 'TTLL2', 'FAM200A', 'FBXL14', 'DDHD2', 'RAP1GAP2', 'RREB1', 'PCDHB8', 'PDRG1', 'USP53', 'DUSP21', 'VRK3', 'FAM136A', 'CSK', 'LBP', 'AKR1D1', 'ARL6', 'SNORD116.29', 'FTLP10', 'MRPL38', 'C1ORF61', 'TXLNGY', 'ORC1', 'PRSS30P', 'SLC8B1', 'METTL7A', 'ZC3H12D', 'SNORA55', 'SPNS1', 'CYP4F22', 'LPCAT4', 'C20ORF27', 'PNO1', 'RNF182', 'FAM217A', 'NUP37', 'XPC', 'RHOH', 'DPYSL5', 'URB1.AS1', 'TMEM154', 'C6ORF15', 'EVA1A', 'SRPR', 'TIMM13', 'CLEC4M', 'OR51V1', 'HNMT', 'LINC00160', 'TPD52', 'OR5M8', 'TBL2', 'PTGDR', 'EMILIN2', 'CCDC54', 'ZNF426', 'PHF5A', 'C5ORF64', 'DPRXP4', 'FLRT1', 'ANKMY2', 'TPTE2P3', 'SNORA70C', 'DNAJC13', 'LCE1C', 'APOBEC2', 'PCDH7', 'COMP', 'ADIG', 'DENND1C', 'LINC01565', 'MINPP1', 'CDKN2B', 'IDNK', 'DTNA', 'SLITRK1', 'PRKRIR', 'MED1', 'EVI5', 'GLP2R', 'C2CD2L', 'F2RL1', 'GSTZ1', 'GPR82', 'SLIT3', 'STK26', 'ATAD5', 'LAMA5', 'OR2T11', 'KIAA1671', 'ST13', 'COX6A2', 'ZNF41', 'GPC4', 'GMPPB', 'METAP2', 'PCYT2', 'SLAMF7', 'CHRNA7', 'POC1A', 'OR2C1', 'GFAP', 'RASA4', 'ASPHD2', 'FIGLA', 'LACC1', 'SUPT7L', 'PTAR1', 'MIXL1', 'FDXR', 'C7ORF73', 'SIGMAR1', 'ATPIF1', 'KIZ', 'OR51M1', 'CCDC102B', 'PPP2R3A', 'SH2D1A', 'RPGR', 'CENPP', 'SLC52A1', 'OR6T1', 'FHL5', 'DEFB135', 'SLC35E3', 'KRT6C', 'MYO5C', 'RBMY1F', 'IRF2BP1', 'PCYOX1', 'C2ORF57', 'SEL1L', 'BAZ1A', 'ADCY8', 'MEPCE', 'PRR14', 'SMAD3', 'HIGD1B', 'RANGRF', 'ZNF511', 'DTNBP1', 'NFKB2', 'MED29', 'SLC6A15', 'BRICD5', 'SLC17A2', 'GSDMD', 'VSX1', 'MMP23B', 'GPIHBP1', 'PLBD2', 'ZNF226', 'CTAGE5', 'CISD2', 'PGLYRP3', 'ACTRT3', 'CAPN5', 'KCNK2', 'TNFRSF4', 'HDX', 'CCDC78', 'MRPS23', 'ZAK', 'TNS2', 'TPPP', 'AMD1', 'CXORF56', 'EIF4E3', 'ANGPTL6', 'DUSP6', 'IL18RAP', 'SERPINB8', 'PLBD1', 'BLOC1S3', 'PDE12', 'C10ORF10', 'ANKRD22', 'TMEM156', 'SPRR3', 'CAPN7', 'PANK4', 'GDAP1', 'NCBP1', 'CCL7', 'CAMTA1', 'DUSP15', 'TFAP2B', 'APOPT1', 'NFKBID', 'CEP68', 'CARKD', 'SLC35F3', 'SCN1A', 'SEC61G', 'ETFA', 'PRAMEF16', 'UGT2B15', 'HAUS7', 'GABRB2', 'IRGQ', 'C2CD2', 'CD300E', 'GUSBP5', 'LOC284379', 'TSPO', 'PHOX2B', 'ZNF781', 'METTL21A', 'TRPV5', 'DTYMK', 'LRRC56', 'NMS', 'HOXB5', 'MRPL44', 'SERPINE3', 'RPPH1', 'SNORD25', 'KMT2D', 'SLC16A5', 'SNORD115.7', 'ZNF416', 'SNORA81', 'ATP5D', 'TRAPPC2', 'ZNF578', 'MAPKAPK5.AS1', 'UGT3A2', 'OS9', 'TRPS1', 'ZCCHC7', 'SOX2', 'NCF2', 'BEST2', 'PRG3', 'GPR65', 'ZP2', 'TM6SF1', 'SULT1A1', 'POLR2G', 'OSBPL9', 'DRC7', 'TAS2R46', 'LRRC7', 'PHKA1', 'ARHGAP30', 'HMGN3', 'TIFAB', 'TTF2', 'NFYC.AS1', 'CTBP2', 'RDH11', 'APBA1', 'FZD5', 'PTCD1', 'OR51T1', 'KCNS2', 'KRT82', 'OR1J1', 'PIWIL1', 'PCBP3', 'ABR', 'POLA2', 'PRX', 'EGR4', 'DLEC1', 'MANBA', 'PSEN2', 'CSMD3', 'NEUROD2', 'ZNF777', 'ANO9', 'SLC25A51P1', 'SNORD4A', 'SERPINB4', 'LPPR3', 'MAGEC1', 'TMEM231', 'SLC16A11', 'COPS3', 'NDST2', 'RGMB', 'RAB15', 'LARS', 'THYN1', 'TRIML2', 'THAP10', 'SIRT5', 'IL15RA', 'KIF18A', 'ZNF33A', 'EEF2', 'MAGEL2', 'ZSCAN25', 'KANSL3', 'HGF', 'RTN4', 'FEZF2', 'YWHAQ', 'PSTK', 'HOXB6', 'ZNF322', 'FOXRED2', 'PMS2P4', 'KDM4D', 'ENO2', 'OR4D5', 'ABCA11P', 'SEPT7P2', 'TOR1B', 'UNC5A', 'TMEM119', 'TREML5P', 'FIS1', 'SPINK9', 'CD164L2', 'SLC13A2', 'OR2C3', 'HHATL', 'C8ORF33', 'TMOD2', 'MCOLN1', 'NUGGC', 'ZNHIT6', 'SLC26A8', 'PSMC3', 'TSPAN5', 'SERINC3', 'ALG14', 'SLFNL1', 'MCMBP', 'OR2AK2', 'NAP1L5', 'BIVM', 'LRRC69', 'ZBBX', 'ANO2', 'TCIRG1', 'APBB1', 'CRLF1', 'DSCR3', 'LRRC52', 'ZNF19', 'FOXC1', 'FAM3B', 'MDM2', 'RAC3', 'EFCAB6', 'ATP1B1', 'STAB2', 'SNORD116.23', 'MIIP', 'PAX1', 'ZC3H8', 'TOR3A', 'MVK', 'C8ORF34', 'FMO4', 'RNF39', 'SMUG1', 'FAM138F', 'OR7C2', 'MMP17', 'SDC3', 'IFNK', 'ERICH5', 'CXADRP3', 'C12ORF77', 'PSAP', 'ANXA3', 'SUSD1', 'OCRL', 'P2RY6', 'LCN10', 'IL1RAPL1', 'WIPI2', 'TJAP1', 'TMEM9', 'FAM196B', 'RFFL', 'MORF4L2', 'LRP2BP', 'ITGA8', 'KATNBL1', 'ZDHHC14', 'NOXA1', 'FAM209A', 'C9ORF171', 'CBLN3', 'TPTE', 'SCAND2P', 'LINC00341', 'ASB16', 'MFSD7', 'KLK1', 'RAPGEF2', 'ATRNL1', 'ZDHHC22', 'ICOSLG', 'SATB2.AS1', 'REV1', 'TNPO1', 'ATL2', 'LINC01554', 'UQCRHL', 'SNORA8', 'PAIP2', 'EPHA4', 'ARFGAP1', 'FEN1', 'ALOX5AP', 'CCDC82', 'MOGAT3', 'SIKE1', 'ZNF571', 'ANGPTL3', 'KLHL12', 'C14ORF166', 'PER1', 'CABP7', 'SHB', 'RET', 'MYO1E', 'MTHFD1', 'RB1CC1', 'NLE1', 'CEACAM21', 'KRT17P5', 'FSD1', 'RAPGEFL1', 'TSG101', 'WDR81', 'LRRC61', 'ARL6IP5', 'C5ORF15', 'DUT', 'ERRFI1', 'LINC00661', 'CNOT11', 'POGK', 'SLC6A11', 'MAP1LC3B', 'TRIM49D2', 'ARL14', 'OR2AG2', 'C2CD4C', 'SMARCD3', 'FAM109B', 'G6PC3', 'MSMP', 'OR52E8', 'LOC344967', 'MIEF2', 'CCDC177', 'CTR9', 'FOXJ2', 'SNORA66', 'DNAJC30', 'PSENEN', 'VRK2', 'LYPLAL1', 'GPR17', 'SDK1', 'HSPA1B', 'DEFB110', 'TSG1', 'SUB1', 'SIM2', 'DBX2', 'PRKCA', 'RAB42', 'AGGF1', 'ZFP62', 'RPL23', 'SKAP1', 'FOSL2', 'CYP4V2', 'ZMIZ1.AS1', 'ROGDI', 'LOC388955', 'MGC57346', 'C9ORF50', 'SCARNA9L', 'ZNF430', 'MTMR3', 'TBC1D22B', 'HYAL3', 'OR52A5', 'HLCS', 'ZNF222', 'SLC22A1', 'CHD8', 'NFE2L3P2', 'MAX', 'AVPR1A', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.9084006581647258 Spearman Correlation: 0.8971419680763077 Coefficient of Determination: 0.8230277786989667 RMSE: 0.32358649014985225 NRMSE: 0.06364801143781516 MAPE: 225.3776163407442 Pearson Correlation: 0.07404428565044079 Spearman Correlation: 0.07091110861731444 Coefficient of Determination: -2.0500603898601087e+21 RMSE: 27753822734.922134 NRMSE: 9073138296.420979 MAPE: 1470761225992.8584 Predictor: ElasticNet Pearson Correlation: 0.6569859113727684 Spearman Correlation: 0.658756421319637 Coefficient of Determination: 0.4062146178659609 RMSE: 0.5927240937148464 NRMSE: 0.11658617106900991 MAPE: 219.63557126735824 Pearson Correlation: 0.12041363879246304 Spearman Correlation: 0.11157994488709339 Coefficient of Determination: -0.19602739452695328 RMSE: 0.67036301628815 NRMSE: 0.21915166114882798 MAPE: 1089.9185313706264 Predictor: RandomForests Pearson Correlation: 0.4781511401125594 Spearman Correlation: 0.4916524382732782 Coefficient of Determination: 0.204676810607339 RMSE: 0.6859771555793125 NRMSE: 0.1349286301296838 MAPE: 343.2800046667745 Pearson Correlation: 0.11183562501123481 Spearman Correlation: 0.1327822042668861 Coefficient of Determination: -0.05740982127241123 RMSE: 0.6303200947587865 NRMSE: 0.20606103329915537 MAPE: 1140.9873921364558 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['MOS', 'TTTY5', 'FAM111B', 'ASB1', 'CST13P', 'PLA2G4D', 'KIR2DL4', 'MSANTD2', 'C2ORF69', 'MED21', 'POLR1C', 'TCAF1', 'PHF14', 'GPHN', 'CCDC97', 'BLOC1S3', 'ZNF304', 'USP40', 'TACC1', 'SLAIN2', 'FAM78A', 'PTP4A3', 'SPIRE1', 'MVB12A', 'KMT2B', 'FXYD7', 'TGFBI', 'PDE6D', 'WFDC10B', 'ZUFSP', 'TTF2', 'AMZ2P1', 'ANLN', 'AFF1', 'ZYG11B', 'TBCEL', 'LOC645752', 'LINC01566', 'HS3ST1', 'DNAJC1', 'PROKR2', 'WFDC5', 'GOLPH3L', 'VENTXP7', 'OGT', 'SKA3', 'OGFOD3', 'CAGE1', 'PRSS16', 'IRF9', 'LINC00606', 'AFAP1.AS1', 'FRAS1', 'PLEKHN1', 'UBE2E2', 'ARL15', 'LRRC71', 'ZNF398', 'GPR32', 'MFF', 'LTK', 'FTH1P3', 'FN3K', 'SLC34A1', 'TAS2R60', 'CFTR', 'HERC5', 'SH3BP5L', 'ENTPD7', 'MPLKIP', 'FBXL8', 'FAM45A', 'MAPT.IT1', 'VWA1', 'GPR19', 'STK32C', 'NR5A2', 'SULT1E1', 'PMM1', 'CCDC64', 'MAPK10', 'MBD3', 'CTXN2', 'PDZD4', 'CDC123', 'SPATA32', 'GABRB1', 'SLC7A13', 'ARHGEF11', 'LGALS13', 'FGF12', 'P4HTM', 'ZGRF1', 'DKK1', 'SNORD53', 'UQCC2', 'ANKRD29', 'ARPC2', 'MT1IP', 'DHRS2', 'LPP', 'ADIPOR2', 'SLC2A8', 'LOC115110', 'POF1B', 'ZNF184', 'SLC23A3', 'PRSS30P', 'CCDC106', 'LIN9', 'VRK2', 'HMG20A', 'VAPB', 'DNAJC2', 'GTPBP6', 'PAGE2B', 'TOP3B', 'FUT2', 'GRXCR2', 'SNORA46', 'MYL6B', 'PINK1', 'MAGEA12', 'FAM21C', 'KMT2A', 'GPR183', 'NBL1', 'PCDHAC2', 'OR2T2', 'POMZP3', 'CXORF57', 'CLN6', 'NLRX1', 'NFKBIZ', 'NOMO3', 'CACNG6', 'TRIM74', 'SIDT2', 'UBL3', 'HRH1', 'MSTN', 'NEK7', 'ADCY7', 'CDH15', 'CRELD1', 'SMIM12', 'FAM208B', 'UNC93A', 'MYBPHL', 'TMEM130', 'OSBPL11', 'RAB11FIP2', 'PPIE', 'NOP58', 'CYSLTR2', 'CPA2', 'GPAA1', 'KIAA1257', 'KLK3', 'ACOX2', 'OR4C45', 'PRAP1', 'PAOX', 'STK10', 'CT45A2', 'HMCN1', 'LENG8', 'ADD2', 'NCOR2', 'DHX15', 'OR2F2', 'ACOT7', 'REEP2', 'XPO5', 'EVI2A', 'PKIB', 'LOC441666', 'MAP1A', 'ZNF397', 'C2ORF15', 'COQ4', 'VAX2', 'ANXA10', 'TUBB8', 'C8ORF82', 'CHRAC1', 'POM121L10P', 'C2CD4C', 'RNASEH2A', 'IFNA7', 'DDX1', 'SAPCD2', 'PAX5', 'CSDC2', 'SUPT4H1', 'KCNH2', 'CYP4F30P', 'ADAMTS16', 'PTK7', 'RALGPS2', 'GATC', 'C20ORF202', 'TATDN2', 'TIAM1', 'MPZ', 'LINC00899', 'HRASLS2', 'FAM83B', 'LGALS8', 'LINC00482', 'SCHIP1', 'TDGF1', 'E2F2', 'LAP3', 'UBE2Q2', 'VANGL2', 'IFNK', 'FAM167A.AS1', 'C2CD2L', 'COMTD1', 'REC114', 'PAQR4', 'DCAF15', 'KRTAP19.7', 'TMED2', 'ZNF524', 'ANK2', 'TMEM168', 'CNTNAP2', 'CWC25', 'SBDSP1', 'GJA5', 'PGA3', 'IMPDH2', 'KIAA1467', 'MPZL1', 'NLRP12', 'PIDD1', 'CATSPERG', 'NDUFA3', 'ZNF688', 'INSM2', 'ABCA8', 'CHCHD2', 'MARCKS', 'CACTIN', 'ZMAT1', 'MEPCE', 'IL13RA1', 'SNORD15A', 'SRFBP1', 'EIF1AD', 'RANBP6', 'TRIM17', 'METTL5', 'UG0898H09', 'ACTR10', 'CXADRP3', 'ZNF19', 'RBMXL3', 'PKD1L3', 'ZAR1L', 'OR5M3', 'XPR1', 'NAP1L5', 'SNORD62A', 'PROP1', 'SLC35B3', 'NEO1', 'OR5AC2', 'VPS41', 'IL1RAP', 'ELP4', 'SERINC4', 'PCDHGB4', 'CKB', 'FBXO2', 'TERF2', 'WDR31', 'SGK223', 'DCAF12L2', 'LY86', 'ERICH1', 'ERICH4', 'BRWD3', 'HECTD2', 'ZP3', 'ABCA1', 'B2M', 'PIK3C2A', 'ADRA1D', 'LCE1C', 'SGCE', 'PCNP', 'TRAF2', 'AP2M1', 'RAB11FIP5', 'MYO1B', 'METTL21C', 'ELOVL3', 'RBM33', 'GPATCH2L', 'NKX2.1', 'MYRF', 'RMI2', 'NAB2', 'ENTPD2', 'LRRN1', 'GKN1', 'ADGRD1', 'TNRC6B', 'PRO0611', 'NRXN2', 'ZNF614', 'PHLDB3', 'C2ORF78', 'PRR23C', 'SAXO1', 'ASAP1.IT1', 'C11ORF70', 'LAMP3', 'FAM9B', 'SLC17A9', 'NCR2', 'RGL2', 'SNORD73A', 'ATP4B', 'ATP2A3', 'NAT10', 'OSBPL10', 'SEC11A', 'MRVI1', 'HCFC1', 'SHARPIN', 'PIEZO2', 'TMEM244', 'SFTA3', 'KLHL28', 'ITGAE', 'SPPL2B', 'OR1C1', 'PTPRE', 'CDH10', 'SNCAIP', 'HIC1', 'PLG', 'SH2D3A', 'CASP4', 'SON', 'WRB', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.6773500131290323 Spearman Correlation: 0.5819771662641231 Coefficient of Determination: -0.9651005063556828 RMSE: 0.7323432052029774 NRMSE: 0.17673654106305411 MAPE: 165.19451828402381 Pearson Correlation: -0.017147682032679426 Spearman Correlation: 0.3591192732894807 Coefficient of Determination: -7.788933838839727e+22 RMSE: 101835533085.81361 NRMSE: 44359251246.16179 MAPE: 2357341446629.65 Predictor: ElasticNet Pearson Correlation: 0.6513017775826737 Spearman Correlation: 0.5508403266879777 Coefficient of Determination: 0.40408191329632326 RMSE: 0.4032882382239263 NRMSE: 0.09732563607981425 MAPE: 75.19340830507065 Pearson Correlation: 0.4207100161802212 Spearman Correlation: 0.4076085736729885 Coefficient of Determination: 0.11207821746094337 RMSE: 0.3438331047527286 NRMSE: 0.14977266400345368 MAPE: 117.19872601408325 Predictor: RandomForests Pearson Correlation: 0.6039361881298265 Spearman Correlation: 0.4683644534151674 Coefficient of Determination: 0.31173739584045335 RMSE: 0.4334104309850477 NRMSE: 0.10459503124865403 MAPE: 88.60737895922658 Pearson Correlation: 0.35760789468028015 Spearman Correlation: 0.368103087228749 Coefficient of Determination: 0.11145999325416067 RMSE: 0.3439527825020681 NRMSE: 0.1498247952703176 MAPE: 116.0724103063349 Protein: CCND1 x_train_column_count: 859 x_train columns: ['SNORD88A', 'HSD11B1', 'SDC4P', 'IFNA17', 'LINC00461', 'HCN3', 'GORAB', 'RUFY3', 'HLA.H', 'CLK4', 'GFI1', 'ZNF85', 'KCNK4', 'TNPO2', 'ARHGDIA', 'ZBTB21', 'OR4F15', 'RYR2', 'KHDC1', 'ZSWIM5', 'RIPK3', 'IFT46', 'FAM212A', 'ASZ1', 'LRRC28', 'ZC2HC1C', 'RNF185', 'C1ORF177', 'SMIM4', 'FKBP3', 'POLR3B', 'MACF1', 'LOC400736', 'NRSN2', 'ZNF182', 'PCID2', 'KDSR', 'DNAJC12', 'USP20', 'CENPL', 'BNIP3', 'WWP1', 'NMUR1', 'SLC35A4', 'GRXCR2', 'COL13A1', 'ADI1', 'TTYH1', 'CEACAM22P', 'ZNF136', 'C5ORF56', 'MRPL52', 'ZNF578', 'PDAP1', 'IRAK2', 'SQLE', 'THEM4', 'UTP15', 'RPS28', 'NSUN6', 'SAA4', 'CALN1', 'ASB6', 'TNN', 'FAM95B1', 'PHLDB2', 'KCNH2', 'PCYOX1', 'ATXN1', 'C2ORF27A', 'UMODL1', 'IZUMO1', 'ANKRD30A', 'OGFOD3', 'SERPINB7', 'DDX23', 'TRMT10C', 'ARHGAP19', 'SLC28A3', 'ANKRD19P', 'GINS4', 'EXTL1', 'LRRC19', 'CCDC53', 'PARP4', 'BSND', 'PSMB5', 'POPDC2', 'TMEM109', 'PFN1P2', 'MRM1', 'GRAMD4', 'ADARB1', 'SPHKAP', 'BICD1', 'MEOX1', 'PWP1', 'ERGIC2', 'LCMT2', 'SLCO1B3', 'RNF17', 'N4BP2L2.IT2', 'PANX1', 'ACTA2', 'PLGLB2', 'TMEM219', 'CEP162', 'UBQLN4', 'LUC7L3', 'LINC00239', 'SHOX', 'UBAP2L', 'B9D2', 'RTN4IP1', 'SNTB1', 'SNORD55', 'TGM2', 'GPER1', 'NPFFR1', 'HYLS1', 'SLC51B', 'F12', 'ATXN3', 'CSRP2', 'NDUFAF3', 'SLC5A7', 'AMHR2', 'GFRA4', 'AOC4P', 'ATCAY', 'KRTAP19.3', 'PRX', 'WDSUB1', 'ISL2', 'JTB', 'DDTL', 'PM20D2', 'SIRPB2', 'SEMA3C', 'ESYT1', 'ZNF793', 'GFRAL', 'MAP3K10', 'EVX2', 'SLC38A10', 'COG1', 'FRMPD2B', 'POLR2A', 'ZNF528', 'ARL10', 'SNURF', 'TMEM127', 'FAM192A', 'HIST2H4A', 'SUGP1', 'ZIC1', 'RALB', 'GPA33', 'PRR26', 'LTBP4', 'LINC01001', 'LINC00887', 'DPM2', 'ZNF556', 'SPRY3', 'SLAMF1', 'IFI30', 'MGEA5', 'RAD51AP1', 'EBI3', 'IQSEC3', 'SLC38A4', 'SCARNA9', 'ANKS1A', 'TAS2R1', 'EFCAB8', 'CDS2', 'XAB2', 'TUBB2A', 'RNF214', 'XIRP1', 'TEX14', 'DISP2', 'FAM117A', 'NIPAL1', 'EPX', 'MEF2BNB.MEF2B', 'PTDSS1', 'SLC5A4', 'TTLL6', 'DKFZP434H168', 'CCNE1', 'HBA2', 'A2M', 'C19ORF52', 'HPRT1', 'CD209', 'S100A13', 'TGIF2LY', 'GAS2L2', 'TTC13', 'URB1.AS1', 'TAGLN2', 'RASL12', 'CFAP52', 'ZMYND8', 'PLEKHA5', 'ARHGAP26', 'LINC00152', 'CRYGD', 'STK24', 'TMEM229B', 'NLGN4X', 'LOH12CR1', 'CAND1', 'PPP1CC', 'DNAAF3', 'DNAJC3', 'PTRF', 'C15ORF56', 'CYP46A1', 'RGS20', 'STK26', 'TOMM40', 'MAPKBP1', 'BMF', 'INTS4P2', 'FRMPD1', 'TBCCD1', 'ZNF33B', 'PSMA7', 'TRIM25', 'PPWD1', 'SNORD116.1', 'SOCS7', 'SNAR.H', 'VPS13C', 'KIF13A', 'KIN', 'WAS', 'ITPRIP', 'MCUR1', 'NAGLU', 'GPAA1', 'LSM5', 'H2BFWT', 'FOXS1', 'KRTAP1.1', 'USP39', 'TTC5', 'IMP4', 'RNF31', 'IL27', 'RBL1', 'C9ORF43', 'ZIC3', 'RBM15B', 'QSOX2', 'CD24', 'SCN5A', 'RCN2', 'SPATA7', 'SEC24A', 'TAPT1', 'EMILIN2', 'SNORD116.11', 'SNORD116.27', 'FBXO31', 'ACVR1C', 'TMEM184B', 'ASH1L', 'SLC17A7', 'GDE1', 'CUL7', 'IFNL1', 'VN1R1', 'ABT1', 'IGLL1', 'DDX11', 'ACBD5', 'TMEM60', 'METTL7B', 'TIMM10', 'BRPF1', 'MMP15', 'CNR2', 'MAP7D2', 'SNRNP40', 'ARMC8', 'IFNA8', 'PLIN5', 'PCDHGB5', 'GAD1', 'JADE2', 'PRDM2', 'TRMT2B', 'FAM13C', 'CANX', 'MYLPF', 'FAM150A', 'STX16', 'OR52E2', 'CCDC54', 'MGMT', 'CYLC1', 'GJC3', 'TSC2', 'POU1F1', 'OR4D5', 'CYHR1', 'SLC9A4', 'DBIL5P', 'FBLN7', 'NTN4', 'LDHAL6B', 'CCDC40', 'CCL2', 'SNORD77', 'INE1', 'ATP1A1.AS1', 'CP', 'NUAK1', 'GPR161', 'F2R', 'UBXN6', 'GYPA', 'IFNA16', 'SMYD1', 'SNORD126', 'SRBD1', 'TFCP2L1', 'ALG11', 'MFSD6L', 'AK8', 'VSIG10L', 'SCARNA15', 'CRYGS', 'IGSF9B', 'CCNH', 'EPB41L4A.AS1', 'LINC00303', 'ABCB6', 'CEP104', 'TMEM199', 'TMEM141', 'CDH20', 'RXRG', 'USP6NL', 'LILRB2', 'WDR90', 'GPRASP1', 'NUP107', 'TOLLIP', 'CTDSP2', 'SPRR2F', 'CGB2', 'CPN1', 'SF3B5', 'DOC2A', 'ATP7B', 'RBM4B', 'XRN2', 'RPA3', 'LPPR1', 'CWH43', 'NAA40', 'MMS22L', 'LRRC6', 'PWP2', 'TMUB2', 'OR9Q1', 'RELB', 'KIF14', 'ZSCAN18', 'UVSSA', 'SPINT3', 'CDH11', 'SPAG5', 'H1FX', 'RPN2', 'PIK3R2', 'COA4', 'CHM', 'KLF1', 'RAMP2.AS1', 'ITFG1', 'CLSPN', 'CHODL', 'NACAD', 'CDS1', 'TLR2', 'DANCR', 'TTC14', 'MIXL1', 'C3ORF35', 'ZSCAN12', 'WIPF1', 'KIAA1804', 'KCNQ1OT1', 'SNAP25', 'LLGL2', 'TMEM121', 'SORBS3', 'SUPT20H', 'C12ORF75', 'SIX1', 'SNORA81', 'ADAD1', 'SLC11A2', 'SYTL1', 'SFTPB', 'SCNN1A', 'MRPS22', 'GNB2', 'RAB37', 'KLHL15', 'SAMD8', 'CDH22', 'GTPBP2', 'DDX12P', 'AMZ1', 'CECR5', 'IPO4', 'DZIP1L', 'CRISPLD1', 'ALDH3B2', 'CATSPER1', 'ZNF287', 'LRCH3', 'C17ORF102', 'PDE4DIP', 'DAP', 'SNORD116.12', 'ARSD', 'CITED1', 'SORBS1', 'PROC', 'PRRG4', 'DAB2', 'HNRNPA1P33', 'GOLGA6L6', 'KLKP1', 'COL20A1', 'HIST1H3J', 'GP2', 'MRE11A', 'GSTM2', 'SNRNP70', 'AGAP4', 'PABPC1L2B', 'HNF4G', 'ZSCAN31', 'BCL10', 'BPIFB2', 'C7ORF61', 'RADIL', 'PDE6G', 'RFPL3S', 'LINC00634', 'FOXI3', 'SERP2', 'KCNT1', 'NAPRT', 'TMLHE', 'IFIT5', 'GNPNAT1', 'C7', 'NUDCD3', 'CTAGE6', 'PIGQ', 'RPL3L', 'NAALADL1', 'COX17', 'NSA2', 'CCRL2', 'PRSS3P2', 'SNORD71', 'CDC42BPB', 'DNAH5', 'SQRDL', 'SOAT1', 'KLF4', 'PPP1R3A', 'SYNC', 'INTS4P1', 'IL10', 'ABHD3', 'RNF13', 'GAL3ST1', 'FAM201A', 'FBF1', 'NCKAP1L', 'SNORA71A', 'LCN8', 'IGFBP4', 'SNAR.C3', 'LARP6', 'ZNF416', 'RENBP', 'IBSP', 'TMEM179B', 'DIXDC1', 'UNC5B', 'DTX2', 'RPRD1A', 'IFITM5', 'C1ORF123', 'TACC2', 'TXNDC12', 'PSD2', 'STARD5', 'MTOR', 'WBP4', 'ANKS6', 'HYI', 'LOC100128573', 'ZBTB25', 'SIRPG', 'MESTIT1', 'SUPT5H', 'YLPM1', 'NKAPP1', 'TUBE1', 'CCHCR1', 'ANKRD10', 'PAX9', 'HMMR', 'RHOBTB1', 'CLK1', 'LOC284023', 'LINC00597', 'PIGY', 'ARHGAP33', 'EIF4A1', 'KRT80', 'OR4F6', 'HIRIP3', 'DIRAS2', 'MTTP', 'LIPT1', 'ABCC1', 'THOC6', 'TAMM41', 'CDC42SE1', 'RAB1A', 'HOXB7', 'OIP5', 'DGAT2', 'LY6G5C', 'LILRA5', 'PI4KB', 'MMRN1', 'PCDHA13', 'ATF3', 'DYRK2', 'DLEC1', 'PSG11', 'AGAP2', 'RAB3C', 'C8ORF22', 'FNDC5', 'HIST1H3I', 'HPCA', 'OR14J1', 'SNORD4A', 'LSR', 'SDHAF1', 'ZNF177', 'CAPS2', 'SNORD90', 'SPTSSA', 'RSBN1L', 'STOML1', 'CANT1', 'FOS', 'OR8J3', 'PCDH18', 'PAXIP1.AS2', 'OLFM1', 'DOK6', 'CYTH4', 'CTRB2', 'ADGRF1', 'CCDC96', 'LIMD2', 'GNAI2', 'COMMD2', 'NUDT8', 'OR5A1', 'OR6C4', 'OSGIN1', 'PTGR1', 'HOMER2', 'MAGEB10', 'HTR2C', 'HIP1R', 'ANGPTL1', 'TMEM89', 'HCG9', 'GOSR2', 'SLC13A1', 'ZNF804B', 'OSBPL8', 'ERO1LB', 'SLC17A9', 'DPYSL3', 'OR5K4', 'ARID4A', 'PRADC1', 'ADGRD1', 'MS4A10', 'WBP1', 'GDF15', 'GSG1L', 'NUTM2F', 'THEG', 'CROT', 'ANP32A', 'C11ORF86', 'FAM168B', 'BHLHE22', 'VHL', 'NSUN2', 'SNX17', 'RAB33B', 'SLC10A5', 'ELF1', 'ZNF324B', 'TMEM207', 'POLR3A', 'BIN2', 'TFR2', 'VSIG10', 'CAPN6', 'PCDH1', 'UBE2D1', 'OR4K15', 'INSR', 'ASGR2', 'UCN3', 'OR2Y1', 'SNAPC5', 'METTL5', 'TCHP', 'CCDC88A', 'DHODH', 'FAM83F', 'CPD', 'NAA11', 'CXORF65', 'TXLNGY', 'AKNAD1', 'PQLC3', 'FAM183CP', 'ATXN8OS', 'LINC00593', 'GABRA4', 'NPHS1', 'RBBP6', 'KRT40', 'POMC', 'GAR1', 'CEP41', 'GALNT18', 'ORC3', 'CNOT8', 'GBP3', 'SBNO2', 'PMCHL1', 'KRTAP13.4', 'BSG', 'SRP72', 'HCG4B', 'AGO3', 'ZNF44', 'SUN5', 'ADCY8', 'RAB22A', 'NDC1', 'COLEC11', 'SELENBP1', 'SMAD5.AS1', 'ADPRHL1', 'CCNB1', 'KIF22', 'DNASE1L1', 'SNX32', 'THBS2', 'MSN', 'PPFIA3', 'IER5L', 'HNRNPL', 'RARS', 'CFAP126', 'PTP4A3', 'ZNF653', 'CTPS2', 'C21ORF91', 'KRTAP19.1', 'SUMF1', 'SSPO', 'RNY5', 'PPM1G', 'ISY1', 'BCKDHA', 'MDC1', 'SLC11A1', 'DOK7', 'OR5T3', 'RIT2', 'RNF125', 'ARHGEF39', 'C9ORF40', 'LINC00470', 'KRT1', 'CACNG2', 'EN2', 'NPEPPS', 'PALM2.AKAP2', 'TOM1L2', 'MOXD1', 'SNORD114.4', 'CACTIN', 'PACRG', 'TCTE1', 'CYFIP1', 'SPESP1', 'SLC25A42', 'MYL10', 'SH3RF1', 'CLDN25', 'PRR7', 'RBM11', 'TCEAL6', 'LAIR1', 'GAB1', 'VN1R2', 'MAP6', 'SOX30', 'RAB5B', 'SNORD116.24', 'ACADL', 'CHI3L1', 'DBF4B', 'TEN1', 'BMP15', 'BIN1', 'SNORD80', 'LINC00202.1', 'PRPF18', 'KLF7', 'MAPK10', 'VEPH1', 'SNAR.G2', 'VTI1A', 'NTAN1', 'ADRA2B', 'ZNF492', 'WDR35', 'PLAUR', 'ARHGEF5', 'RAET1G', 'PCGF1', 'ATAT1', 'ZNF879', 'PSKH1', 'SNORD38A', 'AP3M1', 'MLXIP', 'INSRR', 'GRM3', 'MGAT4A', 'KHDC1L', 'BDP1', 'LOC646762', 'LRGUK', 'ESRP2', 'GPX6', 'LGALS3BP', 'MKKS', 'APOF', 'GOLT1A', 'KCTD2', 'CEP57', 'TRIM42', 'SLC25A51P1', 'ADAMTS10', 'FAM171A2', 'OR4K1', 'IGFBP6', 'EID2B', 'MBNL1.AS1', 'ATP6V0C', 'PNPLA6', 'LIMK1', 'FBXL15', 'NAGK', 'EPC2', 'RNASE6', 'WDR11', 'EFS', 'DLL1', 'OR2T33', 'PTPRVP', 'BCL7C', 'MYO15A', 'UBFD1', 'CPA1', 'NRP2', 'BPHL', 'C12ORF76', 'C10ORF67', 'PLEKHG1', 'CATSPERB', 'LRFN4', 'IMP3', 'CBLN1', 'P2RY11', 'PRPF38A', 'PRAMEF10', 'RNF4', 'ADAM23', 'TRA2A', 'GREB1', 'DEAF1', 'BNC2', 'BCLAF1', 'ARHGEF40', 'ZBTB40', 'PPBPP1', 'SYNPO2', 'G2E3', 'GPM6A', 'NUPR1L', 'CHD3', 'ERC2.IT1', 'SCARB2', 'ANKEF1', 'RELL2', 'RWDD4', 'FBLN2', 'IKZF3', 'DOCK7', 'HHLA3', 'TRPM7', 'ZNF660', 'CD52', 'TCEAL4', 'TOPORS', 'FZD8', 'PREX2', 'RIMKLA', 'SERTAD1', 'UGT2A3', 'NRXN2', 'SSR3', 'SNHG12', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.8341555706139011 Spearman Correlation: 0.8011996706553319 Coefficient of Determination: 0.4140709194914517 RMSE: 0.18727467057365912 NRMSE: 0.11258411620255807 MAPE: 340.2412279533715 Pearson Correlation: -0.03438038008114727 Spearman Correlation: -0.19874431876076926 Coefficient of Determination: -1.199602300061613e+23 RMSE: 72643884772.90518 NRMSE: 68835231418.51854 MAPE: 6063692835287.606 Predictor: ElasticNet Pearson Correlation: 0.4881555226293874 Spearman Correlation: 0.49866810262559746 Coefficient of Determination: 0.1705841975051523 RMSE: 0.22281409887137105 NRMSE: 0.13394939273987994 MAPE: 580.3673045745892 Pearson Correlation: 0.16911138832859363 Spearman Correlation: 0.1672913627351962 Coefficient of Determination: 0.02538978980992812 RMSE: 0.20705984968099478 NRMSE: 0.1962038885287017 MAPE: 416.3942504555589 Predictor: RandomForests Pearson Correlation: 0.5021902903428627 Spearman Correlation: 0.45712549524143054 Coefficient of Determination: 0.1352962941143575 RMSE: 0.22750459637161513 NRMSE: 0.13676918419377856 MAPE: 580.0111289057953 Pearson Correlation: 0.15616129603955595 Spearman Correlation: 0.11421353659473035 Coefficient of Determination: 0.021344840479886495 RMSE: 0.2074890876304352 NRMSE: 0.19661062191962247 MAPE: 449.7956078503113 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['PABPC4L', 'OSR1', 'LRRC2', 'SUSD5', 'UBE2V2', 'SMAD1', 'STK32C', 'CYP19A1', 'MYO18B', 'C10ORF25', 'KCNE5', 'DMXL2', 'MS4A3', 'FAM27C', 'CD200', 'C2ORF49', 'ASGR1', 'CCT3', 'ATMIN', 'RECK', 'TRA2A', 'FAM43B', 'CDC42BPA', 'FUOM', 'TNFRSF17', 'CDH15', 'SPTLC1', 'C9ORF40', 'SYNE1', 'ENG', 'RPS25', 'NQO2', 'SYNM', 'OR10A4', 'SNRNP70', 'THRSP', 'FAM186A', 'CDK15', 'TMEM170B', 'SLFN14', 'EPB41L4A.AS2', 'ALOX5AP', 'IFNGR1', 'CCNB1IP1', 'PIEZO2', 'GSTZ1', 'GDNF', 'SRP9', 'ZNF484', 'JMY', 'RNF115', 'AKAP6', 'RHOU', 'ARMC7', 'LPAR6', 'ANGPTL5', 'ACAN', 'AGAP2.AS1', 'PAXIP1', 'NKAIN2', 'MICALCL', 'FLT3LG', 'MCEMP1', 'BPIFB3', 'AKAP3', 'LIPA', 'EPB41L2', 'EPHB3', 'NCOR1', 'SPA17', 'TAF2', 'ZC3H12D', 'ZNF10', 'ATP6V1C2', 'ERC2', 'SPIN2B', 'RASGEF1A', 'GRIK1.AS1', 'DENND1B', 'PPCDC', 'VPS28', 'TCEB3B', 'MAGEB18', 'ACBD5', 'SNORD115.38', 'TXNDC11', 'NDNF', 'DYNLT3', 'SLC39A2', 'ZNF529', 'SNHG5', 'ZC3H12A', 'SLC26A4.AS1', 'ZEB1', 'LBX1', 'P4HA1', 'ATXN10', 'SGSM2', 'HERPUD2', 'ADORA2B', 'MOS', 'KIAA1429', 'DDX53', 'WSB2', 'LDHA', 'ZNF429', 'OTOA', 'VPS26B', 'GGACT', 'CCDC64', 'DPCD', 'NPS', 'OR6C2', 'LPA', 'TOX2', 'VDAC2', 'FAM27B', 'PPIP5K2', 'CNOT7', 'LGALS3BP', 'CLCA4', 'TTYH3', 'CMA1', 'KLHL12', 'TP53I11', 'TAS2R39', 'BSND', 'TOM1', 'PON2', 'KLRC1', 'DKFZP434A062', 'MSX2P1', 'MFI2', 'TEX26', 'NUP153', 'ZNF273', 'TMEM119', 'ZSCAN4', 'C10ORF128', 'CCL15.CCL14', 'MALAT1', 'MAGI2', 'SLC22A18', 'UTF1', 'GKN2', 'TNFRSF11B', 'TTLL9', 'SNORD114.10', 'LINC00608', 'PEPD', 'CLRN1.AS1', 'CD8B', 'C20ORF24', 'MGAT4C', 'LOC727896', 'LINC00661', 'GTF2A1L', 'PCDHA2', 'BID', 'AOC2', 'ACY1', 'GUCA1C', 'GLI2', 'CDC6', 'C10ORF95', 'ACTA2', 'DCLRE1C', 'MAPK8IP1', 'FGF20', 'ABI2', 'CCDC113', 'HSPA5', 'VPS4A', 'CLEC10A', 'FAM200A', 'SNORD15A', 'ANP32C', 'RXFP4', 'NOVA2', 'SLC7A10', 'HOXA9', 'OR4C16', 'SLITRK5', 'ZSWIM5', 'SNORD116.10', 'LEUTX', 'CDKL4', 'PTPN2', 'LIX1', 'LEFTY1', 'UIMC1', 'ZFAND3', 'RCCD1', 'RPL41', 'TK2', 'ATP6V1D', 'MFSD4', 'ALG10', 'MYCN', 'NDUFV1', 'NFYC.AS1', 'FAM155A', 'PIP5K1A', 'CNTF', 'CFLAR', 'LINC00493', 'ZNF561', 'OR5M1', 'ERN1', 'C14ORF39', 'CADM4', 'ID2', 'LYN', 'EPHX2', 'ATP11C', 'BRPF1', 'USP7', 'PRR15', 'AIF1L', 'APRT', 'ADAM12', 'SLC46A1', 'EHD4', 'GBP7', 'IL13RA1', 'TRIM32', 'ADAMTSL2', 'TMPRSS4', 'ORM1', 'MPPE1', 'CALHM3', 'NID2', 'GPX6', 'UBALD2', 'MYO1F', 'PSMB5', 'CCR7', 'PRMT5', 'GPRASP2', 'COX4I1', 'TPTE2P6', 'OR13C2', 'LRGUK', 'TM9SF2', 'ZCCHC10', 'TNFAIP8L2', 'DDC', 'RAD51D', 'ST8SIA6', 'MAOB', 'GTF2IP1', 'USP18', 'TMEM69', 'CALCA', 'NBEAL1', 'GLA', 'COMP', 'AGAP2', 'HRSP12', 'RBM42', 'PYDC1', 'INCA1', 'CARD11', 'MXD4', 'TARP', 'FUBP1', 'RXFP2', 'NLRP8', 'HIATL2', 'SNAP23', 'FAM225A', 'SMPD3', 'BMP15', 'CENPU', 'TMEM106C', 'CHKA', 'MBTPS2', 'RPIA', 'KANSL2', 'CT83', 'UBE2F', 'BUD13', 'GIPC1', 'SNORD114.27', 'TP53I3', 'PMCHL1', 'TCHHL1', 'IZUMO2', 'TFF1', 'MYLIP', 'MORN2', 'NDUFS5', 'IMMT', 'KAT7', 'RAB11FIP1', 'SLC25A12', 'FAM49A', 'CPSF1', 'GRB2', 'CCDC130', 'TSPAN12', 'GPATCH4', 'C14ORF119', 'KPNA7', 'TTL', 'PLEK', 'PHYHIP', 'ABCB5', 'PACRGL', 'KRT78', 'CST6', 'TSPAN18', 'FLJ36777', 'C9ORF114', 'SORT1', 'DZIP1', 'C4ORF3', 'CCDC167', 'SIX6', 'GVINP1', 'FUT8', 'ABHD16A', 'POSTN', 'PEX11G', 'PDHB', 'CHRNA10', 'ZNF778', 'DNASE2', 'KLK3', 'ACTR3B', 'SCAF4', 'SNORD90', 'OR10A7', 'WDR90', 'SNORD50A', 'AES', 'SNORD65', 'TMTC3', 'DNAJB13', 'GNLY', 'HNRNPA3', 'OR8I2', 'PADI3', 'HSPBAP1', 'TRIOBP', 'KHSRP', 'NAALADL1', 'HNRNPD', 'IL18RAP', 'TIMP2', 'NBEAP1', 'DIMT1', 'ATPIF1', 'KIAA0753', 'TAS2R46', 'OR5B17', 'CCT7', 'TPRG1', 'PARD3', 'CALM2', 'REXO2', 'OR6P1', 'MDM2', 'LINC00160', 'PADI6', 'PCDH8', 'IQCF5', 'ADAM18', 'LPCAT3', 'RABL2B', 'B9D2', 'ATG12', 'RTP1', 'C3ORF33', 'WWOX', 'TPM3P9', 'SYS1', 'NCMAP', 'KIAA1919', 'OR6C76', 'KCNG3', 'CPSF4', 'LOC340017', 'TYMSOS', 'LIN28A', 'OR6M1', 'PIK3C2B', 'GNAQ', 'UBE2I', 'MFSD2B', 'CARD9', 'HMSD', 'CAP2', 'DUSP5', 'ARID5A', 'LINC00052', 'OR6V1', 'PCSK1', 'IL16', 'PAX7', 'RAB3C', 'PRY2', 'LINC00598', 'HSDL1', 'RPL24', 'MRPS12', 'COPS6', 'L3MBTL3', 'FGF7', 'CHCHD6', 'ZNF613', 'TUBA3FP', 'R3HDM4', 'ATP5O', 'ADAMTS7', 'MIR7.3HG', 'SPDYE3', 'PTPN5', 'PARG', 'RQCD1', 'PRMT7', 'CAPN5', 'ZDHHC8P1', 'TXNDC5', 'MIAT', 'PLCB2', 'SLC5A1', 'TMEM123', 'ZNF461', 'WDR18', 'SYNJ1', 'ARL5A', 'GLMN', 'ARGFXP2', 'FMR1', 'TP53INP1', 'NET1', 'PDPK1', 'KHDRBS1', 'ICA1', 'SNAR.H', 'ADAM5', 'MTHFD1L', 'FSTL1', 'BTK', 'OR51I2', 'HES5', 'MEPE', 'SDR16C6P', 'PDGFD', 'ETS1', 'NDRG3', 'RHBDD1', 'SNORD116.13', 'TERF2', 'ODF4', 'PIK3C2G', 'PCGEM1', 'CYB561', 'MRGPRX4', 'DGKA', 'GPATCH2', 'PRG2', 'THBS3', 'DEFA6', 'GFER', 'KRTAP12.4', 'IL4I1', 'PAXIP1.AS2', 'LURAP1L', 'ATP2A1', 'LINC00634', 'CYP27B1', 'PCDH1', 'S1PR4', 'ZNF800', 'PHLDB1', 'LMO2', 'PRAMEF6', 'CCKBR', 'SNORA41', 'MRAP', 'GABRA2', 'MAPT.AS1', 'CSF3', 'CXCL2', 'CFL1P1', 'UGT1A9', 'FAM181B', 'SESN3', 'CIPC', 'UBE2E3', 'SPTAN1', 'ZNF676', 'FBLIM1', 'FAM170B', 'KIAA0586', 'PDE4DIP', 'PRR30', 'C3AR1', 'ZBTB9', 'CFAP57', 'CRIP3', 'LIMCH1', 'KIAA0195', 'CPLX3', 'METTL13', 'GPR65', 'THEG', 'AKR1C8P', 'ACOT9', 'RGPD6', 'SCAF8', 'SFXN2', 'DPP4', 'C12ORF43', 'KPRP', 'IFFO1', 'DNAH3', 'PCID2', 'CAB39L', 'HPN.AS1', 'LYZ', 'CITED4', 'LAMA5', 'MYO6', 'PMEPA1', 'TUBA1A', 'TRIM40', 'BCCIP', 'MED13', 'OMP', 'MEIG1', 'ZNF133', 'SGK494', 'FAM99A', 'CPEB1', 'SCGB1C1', 'GNMT', 'NEUROD4', 'OR10C1', 'PPP1CB', 'CTRB2', 'CLDN5', 'SLC30A9', 'GCN1L1', 'ZNF347', 'PTPRH', 'FAT2', 'EPB41L3', 'WDR72', 'EAF1', 'TNF', 'DCUN1D2', 'TEAD1', 'POLA2', 'MZT2B', 'SLC1A4', 'LSS', 'SNORA61', 'FAM95B1', 'HGS', 'PHGDH', 'KIAA1456', 'ANXA7', 'TRIM60', 'ROBO1', 'KIAA0895', 'PRR20D', 'NAT8L', 'CYFIP1', 'ACER1', 'TAAR2', 'IRX1', 'PSG8', 'TMCO1', 'OR2J2', 'PGM1', 'ABCA4', 'LCE3A', 'FAM92A1', 'RNF7', 'SLC4A11', 'CA7', 'SNORD11', 'P2RX7', 'HIST1H2AL', 'LEPROT', 'SMYD2', 'TAS2R8', 'BICD2', 'ZNF644', 'KRTAP13.4', 'SIN3A', 'BCL2', 'SHC1', 'MAN2B2', 'PUS7', 'TPD52L2', 'ANKRD53', 'CLEC4C', 'CNIH3', 'ROBO4', 'BTBD7', 'GALNT5', 'EFHD1', 'SPAG16', 'NPR2', 'STX4', 'RPN1', 'ZNF295.AS1', 'PCDH11Y', 'USO1', 'SLC22A16', 'RPL35', 'SIRPB2', 'SLC17A8', 'SNORA68', 'CABP5', 'ANXA13', 'DNAJB14', 'PLEKHG4', 'CHRM4', 'ADAMDEC1', 'TAF11', 'OR13C4', 'COL9A3', 'FXYD3', 'CLTA', 'GNGT1', 'RASSF9', 'ASTE1', 'RYK', 'HES1', 'ZXDB', 'OR1A1', 'ZCCHC8', 'TLR2', 'RPL13AP20', 'KRTAP13.2', 'C3ORF22', 'SNORD27', 'CXADR', 'AFG3L2', 'ZNF236', 'C15ORF57', 'RBM41', 'STRADB', 'LINGO3', 'NUB1', 'ZNF350', 'CIB4', 'METTL23', 'CASC8', 'NPY2R', 'ETFB', 'RARA', 'BRCA2', 'SGSH', 'SLC38A5', 'COX10', 'RAB17', 'BEND3P3', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 0.82237635958463 Spearman Correlation: 0.7225091544343931 Coefficient of Determination: 0.5841451609144843 RMSE: 0.6327671412387298 NRMSE: 0.10780229675089524 MAPE: 757.0130745816394 Pearson Correlation: 0.06310252406510408 Spearman Correlation: 0.27397588228711867 Coefficient of Determination: -2.129472160102546e+23 RMSE: 492168253116.98883 NRMSE: 88781343011.21814 MAPE: 9407981575652.137 Predictor: ElasticNet Pearson Correlation: 0.6622531417309419 Spearman Correlation: 0.5978565110651454 Coefficient of Determination: 0.4129720372509674 RMSE: 0.7518001941639278 NRMSE: 0.12808153639264833 MAPE: 1171.1154781884504 Pearson Correlation: 0.558461541618489 Spearman Correlation: 0.5559901694416589 Coefficient of Determination: 0.3045785664478827 RMSE: 0.8894092648532222 NRMSE: 0.16043893225579448 MAPE: 285.2286977095289 Predictor: RandomForests Pearson Correlation: 0.5680696980918193 Spearman Correlation: 0.5382708904569781 Coefficient of Determination: 0.19365853284479828 RMSE: 0.8811148814426268 NRMSE: 0.15011242166424635 MAPE: 725.7730661438853 Pearson Correlation: 0.45357206329910466 Spearman Correlation: 0.48861828356534004 Coefficient of Determination: 0.13025494704308982 RMSE: 0.9946575803266856 NRMSE: 0.17942448595257335 MAPE: 239.317180869333 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['UROD', 'PLP1', 'NWD1', 'TMC5', 'MDP1', 'AMELX', 'NSMCE1', 'HIST1H2BD', 'RCVRN', 'KRTAP4.4', 'F13A1', 'G0S2', 'LRRTM4', 'IZUMO1', 'GUCY1A2', 'C1ORF174', 'CHN2', 'SLC2A7', 'MDH1', 'RLTPR', 'GPATCH2L', 'SUSD2', 'CCDC130', 'IL12RB1', 'SUGCT', 'KLHL26', 'LEAP2', 'INTS12', 'PCBD1', 'MAPKAPK3', 'PCDHB15', 'SYCE3', 'ROBO2', 'PAX1', 'FAM83G', 'TRAPPC10', 'BPIFA1', 'YIPF1', 'AEBP2', 'CTPS2', 'NT5DC3', 'CENPBD1P1', 'BTG2', 'TP53I13', 'PCED1B', 'NIF3L1', 'GBA2', 'CFAP20', 'PLA2G16', 'FOXI1', 'DVL3', 'OR52L1', 'LOC100133331', 'SNRNP48', 'PLAC8L1', 'SLC46A3', 'DDRGK1', 'CHML', 'ALG8', 'C7ORF57', 'FAM178B', 'GLRX3', 'CDK1', 'RAD1', 'ATG12', 'KRTAP9.4', 'ATXN10', 'ZNF781', 'ZCCHC24', 'LINC00636', 'ANKRD20A3', 'RAB8A', 'GOPC', 'FASTKD2', 'BRD7P3', 'PPFIA2', 'STOML1', 'PEBP1', 'MED6', 'ARHGEF26', 'RWDD3', 'DEPDC4', 'ERP44', 'SLC22A15', 'LCE1F', 'VHL', 'DHX32', 'TTLL9', 'AGBL4', 'KLHDC7B', 'RPL28', 'PRKAA2', 'KRTAP6.3', 'HNRNPDL', 'FILIP1', 'ZFP82', 'FMO2', 'CMSS1', 'PLA2G6', 'MTFR1', 'SEC24A', 'RNASE10', 'RBBP8', 'AP3M2', 'IRX2', 'FKRP', 'LOC221122', 'FAHD2A', 'MAST4', 'ANAPC2', 'RRP7BP', 'COX7C', 'HS6ST3', 'WIBG', 'CPNE6', 'CA13', 'ZC3H3', 'B4GALNT3', 'BOK', 'ELAC1', 'CELSR3', 'CD8B', 'CACNB3', 'GOLGA8B', 'CT45A6', 'LINC00667', 'AUTS2', 'CDH12', 'TMEM87B', 'BIRC8', 'KCNAB3', 'NR2E3', 'ACOX3', 'USP14', 'NARF', 'RFX6', 'SLFN12', 'TRMT2B', 'ZNHIT3', 'ZNF665', 'SYF2', 'PANK4', 'TMEM147', 'TMEM145', 'ICAM2', 'HRK', 'TMEM2', 'C16ORF78', 'FRG2C', 'BEST1', 'EIF2S3', 'CD27', 'CDKN2A.AS1', 'RAB11FIP4', 'C11ORF87', 'POLR1C', 'RC3H2', 'SYCN', 'TMEM207', 'TUBB4A', 'VSIG2', 'TSC2', 'IL16', 'CHTF18', 'PKNOX1', 'CEACAM22P', 'TLR9', 'ATP6V1E2', 'RALB', 'SLC30A9', 'CDIPT', 'DHRS9', 'GPHB5', 'AFF4', 'SMARCD3', 'FGF3', 'ARHGEF35', 'SGMS1', 'SNX16', 'ATP6V0D1', 'LRRC75A.AS1', 'DHRS7', 'HPCAL4', 'FAM217B', 'ALDH1A3', 'MYO5A', 'MYL3', 'BCORP1', 'RGL3', 'VILL', 'EIF4B', 'FAM185A', 'TMEM126A', 'MOGAT3', 'ZNF843', 'EEF1E1', 'KCNAB2', 'ARL13B', 'KLK5', 'SERPINA9', 'MPLKIP', 'RBX1', 'ULK4', 'RGL2', 'SPIRE2', 'SOD3', 'SNORA45A', 'B3GNTL1', 'SLC4A5', 'SEC16B', 'ECHS1', 'WDR45B', 'SNX1', 'CEP162', 'RXRB', 'PCDHB12', 'BRCC3', 'DMRTC1B', 'PRRT1', 'ZNF157', 'EEFSEC', 'GBP4', 'EEF1A2', 'FBXO3', 'PCNX', 'DUSP6', 'TFRC', 'WFDC6', 'ING1', 'FAM188B', 'LOC728392', 'MSMB', 'EYA3', 'ZMYND10', 'SGK1', 'LHX2', 'TBC1D23', 'VNN2', 'USP6NL', 'SLCO4C1', 'EPB41L1', 'C10ORF71', 'DEFA6', 'TLX2', 'FLJ16779', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.4786916299532047 Spearman Correlation: 0.4752558110680678 Coefficient of Determination: 0.2046401709660377 RMSE: 0.40221900986800735 NRMSE: 0.14584407889712253 MAPE: 278.48657466587184 Pearson Correlation: -0.16326159366439394 Spearman Correlation: 0.18504466448761386 Coefficient of Determination: -2.1060990883125506e+21 RMSE: 22703896949.057964 NRMSE: 6312336678.684358 MAPE: 164512495675.05255 Predictor: ElasticNet Pearson Correlation: 0.39588394937348126 Spearman Correlation: 0.4207498538340636 Coefficient of Determination: 0.14170744400456847 RMSE: 0.41782886511899403 NRMSE: 0.15150419168379728 MAPE: 221.37080712739157 Pearson Correlation: 0.18907622583930733 Spearman Correlation: 0.21001784313766267 Coefficient of Determination: 0.013760436664680631 RMSE: 0.49130616868751165 NRMSE: 0.1365972527107838 MAPE: 146.21255552237696 Predictor: RandomForests Pearson Correlation: 0.4352269740400251 Spearman Correlation: 0.44730237266833256 Coefficient of Determination: 0.1293842586396653 RMSE: 0.4208177248132973 NRMSE: 0.15258794824023514 MAPE: 223.74577032755542 Pearson Correlation: 0.1669179180667871 Spearman Correlation: 0.15028653795365365 Coefficient of Determination: 0.0091911561102056 RMSE: 0.4924429723709277 NRMSE: 0.13691331684741162 MAPE: 149.0689088587369 Fold: 4 Protein: RB1 x_train_column_count: 371 x_train columns: ['FAM189A1', 'IPO7', 'DLL3', 'ABRACL', 'HIRIP3', 'CAGE1', 'GDAP1', 'UTRN', 'EFCAB10', 'TMEM223', 'SSMEM1', 'CCM2', 'GLT8D1', 'PLEKHG7', 'PATE3', 'MAPT.IT1', 'IGF2.AS', 'ZBED4', 'DDX3X', 'DENND2C', 'BTBD2', 'SEC11A', 'GMDS', 'OR8K3', 'ZNF541', 'CCDC102A', 'SPR', 'EPOR', 'ZNF30', 'NANS', 'FLJ30679', 'ACE2', 'TNFAIP8L3', 'MYLPF', 'COL15A1', 'MIAT', 'MLEC', 'UBR3', 'EMC2', 'TMEM196', 'MAP4K2', 'YIF1A', 'IKBKG', 'PTPN20', 'PCP4', 'DOCK9', 'ANTXR2', 'C11ORF68', 'GCNT3', 'PFKFB1', 'FHL3', 'TRA2B', 'SGSM1', 'PRIMA1', 'EDF1', 'SLC4A2', 'GCK', 'POLR3B', 'ZBTB11.AS1', 'ETNPPL', 'LY6E', 'CELP', 'GAK', 'HOMEZ', 'PARVB', 'UGT3A1', 'TUBD1', 'HIPK1', 'CDHR5', 'FGR', 'YJEFN3', 'OR2W1', 'IGFBP3', 'MGARP', 'BRWD1', 'DIS3L2', 'CAMTA1', 'PPIL3', 'C19ORF66', 'IGFBPL1', 'BDNF', 'LINC00917', 'TSPAN14', 'QKI', 'TPBG', 'GP5', 'PITPNA', 'ACVR1C', 'GDF2', 'FAM83C', 'KIAA0101', 'TCL6', 'GLT1D1', 'CLK1', 'KIR2DL1', 'DEFB113', 'GAA', 'CCSAP', 'NABP2', 'ANKRD34B', 'RINT1', 'LCE1A', 'TOE1', 'CD72', 'KIFC3', 'RELL1', 'CPB1', 'LOH12CR2', 'FAM26D', 'GLUD2', 'SMAD2', 'BTG1', 'PSG4', 'BEND2', 'MTHFD2', 'TNPO1', 'EHF', 'ZNF234', 'TRRAP', 'MCAM', 'POLE2', 'GABRA3', 'JADE2', 'EME2', 'MS4A1', 'KLF4', 'SENP2', 'INF2', 'LDAH', 'ZNF468', 'DDX17', 'CNR2', 'GPR155', 'PLIN4', 'CCDC14', 'NLRP1', 'MKS1', 'PPP3CC', 'HAAO', 'RRP8', 'TMEM204', 'SH2D1B', 'CDH7', 'PPIL1', 'ZNF284', 'PDGFRL', 'MPP6', 'TNKS', 'MYL1', 'NR2C2', 'EPHA4', 'TPMT', 'DUSP16', 'NOL11', 'SPRY2', 'SLC22A8', 'PALLD', 'CFAP70', 'SNAPC3', 'KLHDC1', 'EIF2A', 'GTDC1', 'TRIM36', 'CNIH1', 'DCD', 'NDUFAF2', 'C17ORF74', 'PIF1', 'G6PC', 'DUX4L2', 'TMEM87B', 'C3P1', 'GALNT12', 'GPR37', 'SH2B3', 'CCDC186', 'P3H1', 'NDUFS4', 'NPC1L1', 'RAI2', 'SPRR2A', 'SERINC4', 'NFYB', 'RBM38', 'RAB11B', 'EMX2OS', 'TROVE2', 'TAF5', 'OR11A1', 'CPXCR1', 'C12ORF4', 'CXORF40A', 'ANKRD20A9P', 'BRCA1', 'C1QTNF9', 'FGF23', 'TTC4', 'CSPP1', 'STX1A', 'ZFAS1', 'OR2G2', 'SPAG17', 'EIF2S1', 'KRTCAP3', 'C3ORF79', 'FUZ', 'AP3D1', 'CNBP', 'POM121L12', 'SLCO1C1', 'SGIP1', 'LINC01001', 'PNPO', 'GPR26', 'COMTD1', 'GFM1', 'OR5I1', 'LINC01550', 'CSTF1', 'ZNHIT2', 'ARHGEF16', 'RAB27A', 'CTNNA2', 'MRPL54', 'MS4A13', 'PQBP1', 'ISOC2', 'FGF14', 'HPN.AS1', 'CDK15', 'ARHGAP39', 'TUSC3', 'CFAP97', 'EGR3', 'C3ORF62', 'DNAL1', 'ABCG5', 'NFIC', 'MNDA', 'SDHAP2', 'ZNF510', 'PARP9', 'IL36A', 'MRPS10', 'ZNF764', 'ARHGAP9', 'ZNF586', 'STON1.GTF2A1L', 'SH2D6', 'FLNA', 'DDX4', 'YWHAE', 'MRPL3', 'ARHGAP29', 'SLC6A11', 'MARVELD2', 'ATOH8', 'VEGFA', 'C6ORF120', 'MBIP', 'PREX2', 'PGS1', 'MYO3B', 'PRKCA', 'PRR35', 'PWAR4', 'HSP90B3P', 'KCNS2', 'RBP5', 'STK32B', 'LOC100130987', 'PTENP1', 'SNX14', 'PVRL4', 'FAM86C2P', 'INPP5F', 'USP22', 'CEACAM22P', 'HDDC3', 'STON2', 'DHRS2', 'ERCC6L', 'RHOXF1', 'TADA2A', 'INE2', 'HDAC3', 'NOS3', 'BCL6B', 'GKN2', 'CHRM3', 'MOB3A', 'CCDC53', 'TNXB', 'MAPKAP1', 'TUBGCP2', 'PGBD1', 'TAS2R5', 'ZRANB2', 'ARHGEF38', 'METRNL', 'KIF18A', 'PCGF5', 'SPTY2D1', 'PCGF6', 'BTBD17', 'SPNS2', 'CPEB1', 'COL6A1', 'ZNF180', 'PON1', 'LINC01106', 'TMIE', 'SLC25A52', 'MYOCD', 'DHRS3', 'NAPB', 'ADNP', 'GGT6', 'ANP32AP1', 'GOLGA7', 'NDUFC1', 'B3GALT2', 'L3MBTL3', 'GLIS2', 'RBMY1A3P', 'KCTD13', 'PCDHGB7', 'DOCK10', 'OR13C3', 'WDR92', 'TRANK1', 'SFTA1P', 'SNORD88A', 'CSF3R', 'LARGE', 'MTG2', 'OBSL1', 'ENAM', 'KIF1A', 'KLRC1', 'FAM50A', 'COL9A3', 'KIAA2013', 'MOB1A', 'GPR65', 'ITGA4', 'OR9A4', 'RAB11FIP1', 'WDR38', 'CNGA3', 'CDH11', 'CPN2', 'ESF1', 'ATP4A', 'ANKRD26P1', 'MACF1', 'GLDC', 'RAB11FIP5', 'TAAR9', 'GBP3', 'ASIC2', 'GAST', 'OR51T1', 'NEU3', 'GTPBP10', 'TREML3P', 'KCTD17', 'MPHOSPH10', 'APOBEC3F', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.5014014859967668 Spearman Correlation: 0.4643613815818788 Coefficient of Determination: -0.3131745486653561 RMSE: 0.2882158983960406 NRMSE: 0.10540370772236711 MAPE: 1259.1144062176006 Pearson Correlation: -0.09715663257070443 Spearman Correlation: 0.10421114704688571 Coefficient of Determination: -3.3144652475389085e+23 RMSE: 94925064580.58278 NRMSE: 90948783754.82196 MAPE: 3423486247951.8823 Predictor: ElasticNet Pearson Correlation: 0.3252484123629398 Spearman Correlation: 0.2938781664108796 Coefficient of Determination: 0.07580000182543634 RMSE: 0.24179075239258105 NRMSE: 0.08842552384164024 MAPE: 244.62177049070823 Pearson Correlation: 0.10145972151288622 Spearman Correlation: 0.12012374484134002 Coefficient of Determination: -0.08732104352181835 RMSE: 0.1719305541763166 NRMSE: 0.16472861895557872 MAPE: 126.07261999557275 Predictor: RandomForests Pearson Correlation: 0.42719564939926885 Spearman Correlation: 0.3520822791999259 Coefficient of Determination: 0.1008923090718924 RMSE: 0.23848581981287884 NRMSE: 0.08721687383443492 MAPE: 251.047269991439 Pearson Correlation: 0.03917535519851291 Spearman Correlation: 0.025025249691392665 Coefficient of Determination: -0.10778290750065289 RMSE: 0.1735407605205415 NRMSE: 0.16627137596342073 MAPE: 112.38270723233622 Protein: CDH1 x_train_column_count: 836 x_train columns: ['CHID1', 'ZFHX4.AS1', 'AMBN', 'NUDT5', 'CETN2', 'PBX4', 'PM20D1', 'CCDC71', 'BSG', 'SLC17A8', 'TNFRSF10B', 'PPIE', 'HNRNPH3', 'NMRAL1', 'ARL4D', 'WIBG', 'PGBD5', 'DUSP5', 'TATDN1', 'SNX8', 'SF1', 'SORD', 'SIRPB1', 'KDM5B', 'MRPS16', 'NKX2.4', 'GPR18', 'FBXO15', 'CYHR1', 'SUPT16H', 'TBC1D29', 'ZNF23', 'JUN', 'HSPA9', 'AQP4.AS1', 'TMEM169', 'TSPAN8', 'RPS27', 'HS3ST6', 'RMDN1', 'ABCF1', 'USH1G', 'SFT2D1', 'ZNF202', 'SEPHS1P1', 'TBX15', 'TMEM176A', 'STARD8', 'ELSPBP1', 'RTP4', 'SLC39A5', 'GCLC', 'CAPN15', 'LRRC28', 'SEMA5B', 'SAMSN1', 'CDH4', 'FAM197Y2', 'CPO', 'PI4KAP2', 'PLEKHO2', 'PUM2', 'SCG5', 'OR9G4', 'CORO6', 'MED30', 'C1ORF185', 'LINC01106', 'CXCR3', 'MAN2B1', 'FAM168A', 'SYNJ2', 'LINC01559', 'RAC2', 'FAM47A', 'RABEP2', 'LOXHD1', 'CAMSAP2', 'CDK2AP2', 'TRIM58', 'BNIP1', 'IQSEC1', 'CKMT1B', 'CATSPER1', 'SLC10A7', 'RHOBTB3', 'SOGA3', 'SNCG', 'ERI2', 'KRTAP12.3', 'IMPDH2', 'OR2D2', 'LPCAT1', 'MEP1A', 'FAM134B', 'ZNF227', 'ZDHHC23', 'ELF5', 'NLRP5', 'ATF5', 'OR13C3', 'MAN2A2', 'ARMCX2', 'YWHAE', 'ACER1', 'FRMPD4', 'PCDHGB2', 'DIO1', 'PEAR1', 'MALSU1', 'ANGEL2', 'LAMP1', 'METTL17', 'CLDN10', 'NCF4', 'YTHDC1', 'MYOF', 'CHRNA3', 'RBM17', 'TARDBP', 'CNIH2', 'IBA57', 'MPST', 'MRPL42P5', 'NAALAD2', 'SNORD114.22', 'UFL1', 'TTLL6', 'RPLP1', 'GRIN2D', 'TBC1D10A', 'PROS1', 'ITPKC', 'LINC00326', 'TYMP', 'NKAIN4', 'GALT', 'ADAMTS18', 'CNBD2', 'DNAI1', 'MMS22L', 'FAM118B', 'ATP1A2', 'ZNF25', 'RASA1', 'C9ORF64', 'STX12', 'C10ORF55', 'SLC26A3', 'B3GNT9', 'KLHL5', 'KLF13', 'COMMD4', 'PRSS23', 'GRK4', 'CNPPD1', 'TBL3', 'HGC6.3', 'LDLRAD2', 'MTCP1', 'RGS13', 'TEDDM1', 'MYO1F', 'F2R', 'WNT10A', 'C5ORF46', 'DSC2', 'P3H3', 'CGN', 'MYT1', 'PTP4A2', 'MOCOS', 'SSX2', 'MAP3K14', 'DOCK9', 'MIR143HG', 'SLC15A4', 'C2CD3', 'NXPE3', 'E2F1', 'C20ORF24', 'PCDHGA11', 'OR8G2', 'C2CD2', 'CRYBB2', 'AMBP', 'PER4', 'CCDC9', 'WIPI1', 'ANK2', 'NOS2', 'ZNF831', 'VMAC', 'LOC154449', 'MMP16', 'HSPA1L', 'SLC38A3', 'ANKRD20A4', 'C5ORF47', 'SRBD1', 'CAPN1', 'FAM210A', 'GULP1', 'HLA.DRA', 'PLA2G2D', 'DEFB118', 'VHL', 'SMU1', 'OR10G9', 'ACOT6', 'FAM138D', 'KLK10', 'EXT2', 'AP2B1', 'ABCD1', 'MRPS34', 'YBX1', 'N4BP2L2.IT2', 'PRRT1', 'SNORD115.1', 'SLC6A17', 'HSD17B10', 'PMCHL1', 'TNIP2', 'C1QBP', 'HYALP1', 'PRB1', 'GOT1', 'TMEM181', 'WDR63', 'PPBPP1', 'FAM195A', 'SNAI3.AS1', 'MZF1', 'SNORD70', 'CAPS2', 'CARD8', 'ZNF557', 'SIDT2', 'ENDOG', 'SMO', 'MOSPD2', 'MAPKAPK5', 'CEP135', 'ZBTB40', 'ARID3B', 'EIF5', 'HMOX2', 'SYTL1', 'ABCB11', 'BOD1L1', 'PRKCB', 'SNORA14B', 'ULK4P3', 'SEC16B', 'SLITRK1', 'KRT222', 'SPAG17', 'HENMT1', 'PLEKHA4', 'LINC01098', 'MCF2L2', 'TCEAL4', 'SON', 'SCMH1', 'TMEM211', 'GZF1', 'GALR3', 'TERT', 'S100A16', 'CBWD1', 'ATF6', 'EOMES', 'RASSF8', 'MTMR11', 'PKP4', 'FHL1', 'FAM20B', 'KLHDC8A', 'AADACL4', 'ITGA8', 'GNGT1', 'ZBTB8OS', 'MSTO2P', 'MBP', 'CMTM8', 'SRRD', 'STYX', 'CRYGB', 'AGTPBP1', 'YWHAB', 'COX16', 'APMAP', 'CHKB.CPT1B', 'VPS72', 'PPP1R14B', 'METTL7B', 'ZNF823', 'TTC27', 'SNORA9', 'TM7SF3', 'RWDD2A', 'BTBD1', 'TMEM38A', 'AMOTL1', 'PTF1A', 'LRTOMT', 'CREB3L1', 'TXK', 'HMG20B', 'AGER', 'SLED1', 'ARHGEF11', 'VPS26B', 'TEAD4', 'WARS', 'KIAA0922', 'CXORF21', 'HERC5', 'TEX12', 'CCDC81', 'LMNTD2', 'CENPL', 'RAB3IL1', 'TAF1L', 'TAS2R10', 'ARPP21', 'CEP44', 'MFSD11', 'DDX21', 'ITIH5', 'DCAF7', 'WNT2B', 'TTLL7', 'SEMA7A', 'ZNF773', 'ARL16', 'FCF1', 'LINC00298', 'FARP1', 'TNFAIP8L3', 'RNF41', 'DLEU7', 'MYBPC2', 'CACNA1C', 'CDKL4', 'CAPZB', 'STX10', 'TPRN', 'LINC00597', 'LMOD2', 'POU4F3', 'MRPL17', 'ADAMTS6', 'UBE2Q1', 'BMP8B', 'FCGR3A', 'OBP2A', 'NNMT', 'TMEM132C', 'TREML1', 'SMOX', 'NEK4', 'ZNF706', 'ASPRV1', 'VTRNA1.3', 'EHF', 'CHD1', 'CRCP', 'SAMD1', 'SLC6A19', 'C19ORF52', 'SLC48A1', 'PCSK1N', 'PSMD12', 'P2RX4', 'AIF1L', 'ZNF493', 'OR3A2', 'NEDD4', 'SPZ1', 'GRIA3', 'AS3MT', 'MS4A15', 'FAM114A2', 'MVB12A', 'ZNF567', 'FKBP7', 'RAB26', 'CTDSP2', 'ACOT4', 'TDRD3', 'GATAD1', 'TRIM16L', 'ARHGAP10', 'KRT76', 'LINC00304', 'SNORD45A', 'ZNF839', 'BHMT', 'AGPAT1', 'ANKFN1', 'ZNF252P', 'EGLN1', 'EVX2', 'GNAL', 'CCDC108', 'SV2B', 'WFDC9', 'SGSH', 'PRRG2', 'HACE1', 'FBXW8', 'C19ORF80', 'ODF3', 'KRT72', 'IL20RA', 'FUBP3', 'TMEM189.UBE2V1', 'ASAP1', 'KCNQ5', 'HIST1H1T', 'ASB17', 'H1FNT', 'MAP3K1', 'FAM19A1', 'SNHG3', 'PGAM1', 'AGMAT', 'APOL5', 'TUBB4A', 'DYNLT1', 'CCM2', 'FRRS1L', 'UTP3', 'ITGB1BP2', 'GRTP1', 'AFMID', 'FYTTD1', 'NCALD', 'PLAGL2', 'BHLHA15', 'CTSG', 'CHRNB3', 'EMC4', 'CISH', 'STXBP2', 'FZD2', 'STK19', 'MCM2', 'NAT2', 'KIAA1429', 'SPATA6L', 'CNIH3', 'RSPH3', 'SNORD116.13', 'TRIM61', 'NGRN', 'NDP', 'FAM110D', 'TENM1', 'CXCL8', 'USP51', 'ZNF559', 'SIAH3', 'DOC2A', 'ERCC2', 'KRBA1', 'CHRD', 'ZDHHC8P1', 'NDUFAF2', 'TMEM260', 'ALS2', 'RMI2', 'CDH6', 'OXCT2', 'SERPINA4', 'LPAR3', 'MKRN1', 'TMPRSS9', 'TRPC3', 'TWF2', 'PKP1', 'HCG4B', 'CUL9', 'ATG9B', 'ARHGDIG', 'ATP5G2', 'SPIB', 'ASCC2', 'IGFBP2', 'YWHAQ', 'FAM167A.AS1', 'ARHGEF33', 'ARID5A', 'CELF5', 'MYCBP2', 'MYLPF', 'DHRS4', 'HEPACAM2', 'HIST1H2BK', 'SNORD65', 'CLP1', 'ADGRE4P', 'AOC2', 'UBL5', 'PSME3', 'ICOSLG', 'KIF4A', 'SOX1', 'DIDO1', 'RAPSN', 'USH1C', 'SLC4A4', 'DNAJC14', 'ABL1', 'WDFY3.AS2', 'SLC45A3', 'NUP188', 'HOXD10', 'CORIN', 'KLRB1', 'OR14C36', 'AKR1B15', 'SMPD1', 'UBR7', 'TDGF1P3', 'SLC26A2', 'FAM3A', 'FAM105A', 'LRRC8A', 'ARHGAP11A', 'SLC6A9', 'SFRP1', 'RBSN', 'OMA1', 'VEGFB', 'TCTA', 'KRT9', 'ZNF271P', 'XPO4', 'LMOD1', 'ZP2', 'FBXL3', 'THOC6', 'ARHGEF15', 'OGFRL1', 'RGS22', 'FAF2', 'OLFML3', 'AK4', 'HCN4', 'SNRNP25', 'KCNMB3', 'LINC00301', 'WEE2.AS1', 'GPM6B', 'HFM1', 'CRP', 'ARHGEF2', 'IGF1', 'FAM150A', 'OTOA', 'WDR4', 'STUB1', 'MRPL3', 'NCK1', 'SERINC4', 'OCEL1', 'IFNW1', 'CEP68', 'OR5R1', 'FDCSP', 'NMNAT2', 'PNPLA5', 'SLC2A3', 'DAPK2', 'GFI1', 'HIST1H2BM', 'IFT80', 'BCORP1', 'OR6C4', 'GNL3', 'CRAMP1L', 'MAGEA10', 'ARPP19', 'KLHL10', 'PRAM1', 'PPP1R3D', 'LILRA6', 'FRG1B', 'HAUS7', 'ALPL', 'SRP14', 'CCDC66', 'FGF17', 'C2ORF47', 'NME1', 'GPR149', 'KCNU1', 'GPX7', 'CPTP', 'LGALS1', 'PCDHGC4', 'KIF6', 'KIF22', 'HMHA1', 'C6ORF201', 'DNAJC3', 'RGAG1', 'MGC16275', 'COMMD8', 'LINC00238', 'PMS2', 'SPATA7', 'CACNA1H', 'CLNS1A', 'KRTAP9.8', 'KCND2', 'NECAB2', 'RFX7', 'TRPC6', 'GDI1', 'TCF21', 'SLC46A1', 'FAM182B', 'ATP6AP1L', 'KCNJ4', 'ZNF738', 'PHYHD1', 'PIGU', 'DRAXIN', 'SNRPE', 'ECEL1', 'LINC00475', 'PPIP5K2', 'MIF', 'ANKMY2', 'TSTD1', 'DLEU1', 'SPATC1L', 'ZFAND5', 'SF3B5', 'KHK', 'RNF181', 'ALG9', 'NEXN', 'DPP8', 'MEMO1', 'ASXL2', 'CHRNA1', 'GAS2L2', 'PGLYRP3', 'TBRG1', 'CDH8', 'TMEM41B', 'SAMD8', 'RGR', 'KLRC4', 'LINC00923', 'FAM76A', 'SF3A2', 'ROBO1', 'ASMT', 'OR6N2', 'TMEM185B', 'GPR88', 'ISOC1', 'ZFAND2B', 'MAP3K2', 'DPY19L2P2', 'IL21', 'TNFAIP2', 'ST13P4', 'OR7C2', 'MPI', 'FBLIM1', 'MCF2', 'PDCD10', 'ERCC6L', 'SIGLEC16', 'IL17RC', 'OR8G5', 'TRIM37', 'TEX40', 'KDELC2', 'THAP9', 'FAM50B', 'MSH2', 'CX3CL1', 'MYL6B', 'CD27.AS1', 'TRMT10C', 'CYTH1', 'STMN4', 'ASIC4', 'OR5W2', 'GIPC2', 'SUSD5', 'SHROOM2', 'SPANXN4', 'KIAA1549L', 'DNM2', 'TTTY22', 'ZNRD1.AS1', 'SNORD91A', 'GUCA2B', 'INO80C', 'TIGD7', 'STON1', 'FTHL17', 'IRAK1BP1', 'SARS2', 'PIDD1', 'SCNN1D', 'LCN1', 'DIRAS3', 'OR8S1', 'FANCG', 'GTSE1.AS1', 'NFATC1', 'DCX', 'SMARCD2', 'MUC5B', 'RIPK4', 'TMCO3', 'SLX1B', 'SLC35B3', 'EPN2', 'TPX2', 'EAF1', 'ERGIC1', 'NLRC4', 'LRRC29', 'C12ORF49', 'WDR13', 'DEPDC5', 'HEPHL1', 'CDC42SE1', 'KLHL6', 'UBP1', 'DUSP9', 'RPS6KA1', 'OLAH', 'IL1B', 'EVI2A', 'SKAP1', 'C8ORF44', 'ATF3', 'CELA2A', 'LOC642929', 'CYP2U1', 'CCDC25', 'TPP1', 'RAVER2', 'AP3S2', 'CLPSL2', 'FAM69B', 'SPSB2', 'CAMKK1', 'FAM89A', 'NXF4', 'SNORD115.8', 'ZNF322', 'STYXL1', 'CST1', 'C17ORF104', 'SSX1', 'METTL22', 'SYCE1', 'ZIC3', 'UAP1', 'LOC100190986', 'KRTAP5.11', 'PLOD3', 'ZNF641', 'MTHFS', 'ADAMTSL2', 'PYGO1', 'ING1', 'LOC100133050', 'ATP1B1', 'ZCCHC13', 'PDHX', 'ZNF207', 'WDR7', 'TRANK1', 'KIAA1147', 'BORA', 'LRP2BP', 'SNORD121A', 'ZNF112', 'GNB3', 'KRTAP23.1', 'ANKHD1', 'MPV17L2', 'ACTRT2', 'JPH2', 'DDX1', 'KRTAP10.4', 'GPR176', 'CES5A', 'GOLGA8A', 'CD46', 'ABHD6', 'TBX2', 'TTPAL', 'MRTO4', 'GPR3', 'ITPR1', 'C1S', 'MBOAT7', 'TMEM161B', 'PER3', 'LRIT3', 'C5ORF58', 'NF1', 'PLCZ1', 'POLA1', 'C9ORF173', 'LRRC43', 'DEFB132', 'OPLAH', 'SUPT20HL1', 'NME1.NME2', 'CDV3', 'GALNT14', 'DKFZP434H168', 'ZNF503', 'RSG1', 'NUDT1', 'SNAI2', 'ZBED8', 'IL27RA', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 0.869456600384241 Spearman Correlation: 0.8349395772107466 Coefficient of Determination: 0.6626195635479218 RMSE: 0.6499716606996255 NRMSE: 0.10349537605484307 MAPE: 634.4938188403283 Pearson Correlation: -0.035840382994057174 Spearman Correlation: 0.23208396253814442 Coefficient of Determination: -2.508481742365273e+22 RMSE: 184744079036.91058 NRMSE: 33515489103.608467 MAPE: 11268738666622.625 Predictor: ElasticNet Pearson Correlation: 0.7304345802661693 Spearman Correlation: 0.7046649283451959 Coefficient of Determination: 0.503436815162347 RMSE: 0.7885363758932092 NRMSE: 0.12555911848240647 MAPE: 461.11117893158024 Pearson Correlation: 0.517168574903971 Spearman Correlation: 0.5090811606129753 Coefficient of Determination: 0.25168745801180414 RMSE: 1.0090357842536712 NRMSE: 0.18305500240442496 MAPE: 330.11837900793387 Predictor: RandomForests Pearson Correlation: 0.6082249430624947 Spearman Correlation: 0.5324169522852709 Coefficient of Determination: 0.36757237877135795 RMSE: 0.8898972984174334 NRMSE: 0.14169887876459877 MAPE: 244.53110262116468 Pearson Correlation: 0.668579671301823 Spearman Correlation: 0.5079528962390303 Coefficient of Determination: 0.3699485942652653 RMSE: 0.9258764729721125 NRMSE: 0.16796859202716022 MAPE: 229.65306871048435 Protein: CDH2 x_train_column_count: 474 x_train columns: ['PSMG1', 'SMR3B', 'LY6K', 'CEBPB', 'CHST8', 'NANS', 'NDUFB6', 'TMEM159', 'CLTCL1', 'GLT6D1', 'VCP', 'SLC9A3R2', 'FBXL3', 'CDH12', 'USB1', 'PSMD5', 'PHF20L1', 'IFIT1B', 'KRBA1', 'OGN', 'PROM1', 'ASPM', 'SCMH1', 'DEFB105A', 'NCF1', 'C10ORF10', 'CDKL4', 'VLDLR', 'RAB40A', 'TM6SF2', 'ZNF567', 'SKP1', 'ZNF839', 'ADD2', 'SNORD57', 'C9ORF163', 'RASA1', 'PTBP2', 'ANAPC15', 'TMEM145', 'RAB22A', 'KIF20B', 'KIF3C', 'GDF6', 'DNHD1', 'RNY5', 'SNX5', 'ZNF366', 'DCAF5', 'GLMN', 'GSTK1', 'DFNA5', 'GIMAP7', 'SEBOX', 'NPPC', 'SLC22A10', 'SQSTM1', 'PRDM14', 'C9ORF142', 'JAG1', 'FLG2', 'SLC34A3', 'CYMP', 'R3HDM1', 'FAM98C', 'SLC12A6', 'SEC1P', 'UBXN4', 'HYLS1', 'CYP1B1.AS1', 'CD177', 'DNAI1', 'TMEM140', 'DEFB115', 'ARL10', 'MED28', 'TIGD7', 'LURAP1L', 'C10ORF88', 'SCARNA12', 'SNAPIN', 'CST4', 'CPEB3', 'OLIG1', 'SNORD58C', 'HIST2H4A', 'ORC6', 'PROSER2', 'UBE2A', 'GUCY1B3', 'PGAP2', 'TEDDM1', 'FOXO1', 'GNMT', 'SNORA26', 'ARL13B', 'C2CD2', 'GTF2H4', 'SLC38A8', 'CLSTN3', 'PTPRU', 'GCKR', 'GDF10', 'E2F4', 'SLC7A6OS', 'NAP1L6', 'AKAP3', 'GFPT1', 'ZCCHC24', 'SNORD78', 'RBFA', 'TAF13', 'TMEM97', 'ADPRHL2', 'FTH1P3', 'OLR1', 'NAPSA', 'AP4S1', 'ALDH1A2', 'SMUG1', 'MRPL40', 'CFH', 'NUDT7', 'MRPS36', 'FAM81A', 'TM4SF1', 'SCAMP4', 'KIAA0125', 'KLK5', 'MT1M', 'FAM66C', 'MT1B', 'MEFV', 'CTHRC1', 'PHYHD1', 'LYPD3', 'AK2', 'NLN', 'MBTPS2', 'LYPD6B', 'SMAP1', 'UGT1A8', 'DUSP5P1', 'DPH3', 'MRPS15', 'ZNF98', 'C6ORF10', 'ATP13A5', 'CDC42BPG', 'BICC1', 'TMPRSS12', 'SASS6', 'TOR1B', 'PAQR8', 'KANK4', 'FOXQ1', 'POLE', 'LRRC14B', 'CEP170B', 'HIST1H2AA', 'PCDH15', 'LCE3A', 'OR4A16', 'HLA.DQA1', 'EIF4E', 'GPR20', 'CTAGE9', 'PRRT3', 'TUBB', 'KRCC1', 'TBC1D2', 'TRIM42', 'AGPAT4', 'CA4', 'EXOSC5', 'NOS1AP', 'JRK', 'DDIT3', 'HSPBAP1', 'MYOC', 'RBCK1', 'EGLN2', 'FBXL15', 'DEPTOR', 'CHP2', 'IL6ST', 'CDC42SE1', 'CDRT4', 'GLIPR1L1', 'MAP3K15', 'KRT39', 'SOCS5', 'MMADHC', 'PAAF1', 'PLCG2', 'SLC6A18', 'OR6C65', 'SBK2', 'SLC22A5', 'ADRA2C', 'VDAC3', 'SNORD116.1', 'SMIM15', 'CXCL8', 'KIT', 'ZFYVE9', 'LOC493754', 'MIF4GD', 'SFT2D3', 'MYOM3', 'GPR101', 'NAT8', 'OR8K5', 'ADAM15', 'PPP5C', 'GPR119', 'ACAD9', 'NPHS2', 'STAT1', 'LOC646214', 'TUBGCP2', 'OR2T6', 'RASGRF2', 'RTCA', 'TGIF2', 'FABP4', 'PCSK1N', 'ATP5J', 'OR2B3', 'VSIG1', 'LOC90246', 'FIBIN', 'CACTIN', 'CCT6P1', 'ZCWPW1', 'NUBPL', 'MEP1A', 'SMAGP', 'CDC16', 'RELT', 'ASAP1.IT1', 'CCDC28B', 'FAM184B', 'YBEY', 'SNORA78', 'TBC1D3P2', 'COLQ', 'ABCC2', 'ACTR3C', 'CYR61', 'GUSBP1', 'INPP4A', 'CERS4', 'MRE11A', 'LHX9', 'NPAS2', 'ASMTL.AS1', 'PIN1P1', 'COPRS', 'ZRANB3', 'KCNT2', 'SEMG2', 'DUSP27', 'FIGNL2', 'SBSN', 'DDX43', 'PSMG2', 'OR1A2', 'PATE3', 'CDC25B', 'NOLC1', 'HERPUD1', 'SNORD115.48', 'PPP1R3G', 'DVL2', 'VPS37A', 'ATP12A', 'DSTN', 'OGFRL1', 'ZCCHC3', 'CEACAM19', 'CSN1S1', 'GALNT1', 'SPSB4', 'OR6B3', 'SYCE2', 'CAPRIN2', 'PRIMPOL', 'GLYCTK', 'TBX4', 'ARSG', 'THUMPD1', 'NT5DC3', 'N4BP2L1', 'TAF10', 'NADSYN1', 'LZTR1', 'OSGIN1', 'STAM', 'WFDC11', 'GTF3C5', 'HIGD2A', 'SNORD51', 'COL6A6', 'ATG101', 'RPL31P11', 'SLC11A1', 'CYP4Z2P', 'KRI1', 'ABCB9', 'INADL', 'SH2B1', 'HEATR6', 'TMEFF2', 'FAM224B', 'PTGER1', 'ZNF826P', 'WDR54', 'SHH', 'COL18A1', 'SLC9A3R1', 'ACPT', 'GLTSCR2', 'ZNF814', 'GALK1', 'CRYM', 'KRTAP4.8', 'DKFZP434A062', 'MCTP2', 'APBA1', 'GOLGA6L9', 'VGLL4', 'RPS6KA4', 'MTG1', 'TMEM161B', 'RXFP1', 'SLC7A2', 'EIF4A2', 'VWA8', 'DCD', 'WWP2', 'LMTK3', 'IL20RB', 'DMRTC2', 'ANO8', 'NPY5R', 'HOXD10', 'EOGT', 'RAB3IL1', 'GOLM1', 'PRKX', 'NCAPH', 'TMEM45B', 'MSH2', 'PCDHGB2', 'NUP107', 'ATP1B3', 'IFNAR1', 'KCNMB2', 'AARS', 'THNSL2', 'SMYD3', 'HNRNPA2B1', 'ABCC10', 'PPP1R14D', 'PAPSS2', 'ANP32B', 'CENPU', 'KRTAP27.1', 'WDR60', 'GATS', 'DNAJC21', 'ARSA', 'SLC2A2', 'CA2', 'ARL8A', 'TIE1', 'FITM1', 'SNORA81', 'PSMD1', 'UBE2W', 'PIGQ', 'METTL10', 'CALCR', 'DAND5', 'DIP2A', 'AIMP2', 'CDH3', 'ATG5', 'NPDC1', 'ZGPAT', 'LILRA1', 'DMRTC1B', 'RSBN1L', 'UBL4A', 'RAD51AP1', 'TAB2', 'IL11', 'ZNF354A', 'IL9R', 'COL15A1', 'HIST1H4C', 'FANK1', 'OTOS', 'ETF1', 'ARL15', 'RPL22', 'CYP2B7P', 'CNOT7', 'CELSR2', 'SLC36A4', 'CLEC12A', 'NUTM2F', 'STXBP2', 'TUBA3C', 'OR5AC2', 'C7ORF49', 'PIK3IP1', 'CPLX1', 'HOXA6', 'CDIPT', 'SMCHD1', 'HCG18', 'TPPP3', 'TFIP11', 'SNORD111', 'GHDC', 'SUMF2', 'VAMP3', 'C5ORF38', 'CORT', 'SSFA2', 'GAGE1', 'ACSM4', 'MAPK4', 'CNPPD1', 'AP1B1', 'PMPCB', 'SNX4', 'TUBA1B', 'ABHD14A', 'LRIT2', 'SNORA21', 'GATA1', 'PLCH2', 'JUP', 'PDRG1', 'PDCD1LG2', 'HIST1H2BK', 'DHX34', 'FBXO22', 'RFXANK', 'RHEBL1', 'SKIDA1', 'CDHR5', 'PHYHIP', 'NUMA1', 'C10ORF95', 'NPTX1', 'DUS3L', 'BDP1', 'PCDHGA3', 'ZNF334', 'FOXD1', 'AATK.AS1', 'TCP10L2', 'CRYBA1', 'PLD1', 'PAH', 'OR13C4', 'MS4A7', 'RCCD1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.5117304491419483 Spearman Correlation: 0.5132680336466853 Coefficient of Determination: -0.025303041967703832 RMSE: 0.38413307840599076 NRMSE: 0.1391887377367892 MAPE: 2734.0480159684075 Pearson Correlation: 0.0262042569135507 Spearman Correlation: 0.25412314645474077 Coefficient of Determination: -1.1268569696530274e+26 RMSE: 3537746837434.8257 NRMSE: 1825010749367.9714 MAPE: 219442632508127.84 Predictor: ElasticNet Pearson Correlation: 0.374051523106415 Spearman Correlation: 0.3699735292733395 Coefficient of Determination: 0.11576322127208183 RMSE: 0.35673019495276553 NRMSE: 0.12925943726094846 MAPE: 960.3738178264902 Pearson Correlation: 0.2318412897958148 Spearman Correlation: 0.21308744498061075 Coefficient of Determination: 0.01491992593217728 RMSE: 0.3307715291529552 NRMSE: 0.17063448121876687 MAPE: 230.88858694853263 Predictor: RandomForests Pearson Correlation: 0.43332386808094475 Spearman Correlation: 0.3821302931340068 Coefficient of Determination: 0.11135777231859711 RMSE: 0.3576177423317529 NRMSE: 0.12958103570249763 MAPE: 637.4341435771017 Pearson Correlation: 0.19493753425707275 Spearman Correlation: 0.2234317136123892 Coefficient of Determination: -0.013887502736710244 RMSE: 0.33557317639986484 NRMSE: 0.17311149787455368 MAPE: 138.04954738083651 Protein: CDH3 x_train_column_count: 75 x_train columns: ['ADIG', 'KIAA2018', 'TCAF1', 'ORAOV1', 'TEX2', 'P2RY8', 'ACKR1', 'EFHC2', 'TNXB', 'ITPR3', 'RNF17', 'VPS52', 'NEUROG2', 'FAM186A', 'DNAJB14', 'C12ORF10', 'WTAP', 'CLRN1.AS1', 'ABCA10', 'AP4M1', 'SMC2', 'PFDN2', 'NFIA', 'KCNE1', 'RNF168', 'HSFY2', 'SIVA1', 'ACBD6', 'TMEM19', 'SNORD77', 'MEIS1', 'RNF214', 'GPR1', 'PCDH10', 'GMCL1P1', 'PALB2', 'INE1', 'TMEM135', 'MYT1', 'YDJC', 'NKX1.2', 'SNORD114.8', 'TPGS2', 'SLC39A8', 'SLC5A4', 'DIMT1', 'ATAT1', 'RTN4RL1', 'SPRR1B', 'NINJ2', 'ARMT1', 'S1PR5', 'KARS', 'NGLY1', 'PERP', 'ECEL1', 'SH2B3', 'GPR6', 'CDC14B', 'SNORD30', 'WNT9A', 'TM6SF2', 'SGCE', 'LTF', 'ZNF69', 'NID2', 'CEBPA', 'MTRF1L', 'KRTAP10.6', 'FZD8', 'NBPF6', 'HNRNPR', 'FANCI', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.4224162466051482 Spearman Correlation: 0.41319941782046016 Coefficient of Determination: 0.17828198625028668 RMSE: 0.18665473099536173 NRMSE: 0.13302644853354742 MAPE: 475.6468952954675 Pearson Correlation: 0.080735492838657 Spearman Correlation: 0.2536287190762385 Coefficient of Determination: -3.0224072461152603e+20 RMSE: 3612551774.3635697 NRMSE: 3215329916.4814506 MAPE: 128421440713.78624 Predictor: ElasticNet Pearson Correlation: 0.36416761335501385 Spearman Correlation: 0.365220693060574 Coefficient of Determination: 0.10464269694255524 RMSE: 0.19483895357850858 NRMSE: 0.1388592396899159 MAPE: 295.8902917577994 Pearson Correlation: 0.21584718861886326 Spearman Correlation: 0.21789415132501785 Coefficient of Determination: -0.026137220867789468 RMSE: 0.2104942852677213 NRMSE: 0.18734916893721743 MAPE: 286.81764068317733 Predictor: RandomForests Pearson Correlation: 0.38713948162257805 Spearman Correlation: 0.382750441202785 Coefficient of Determination: 0.12020739591480367 RMSE: 0.1931380097072297 NRMSE: 0.13764699866530045 MAPE: 371.63945426628527 Pearson Correlation: 0.20295872766955658 Spearman Correlation: 0.22198861334949854 Coefficient of Determination: -0.03816670068200434 RMSE: 0.21172451002826154 NRMSE: 0.18844412306483213 MAPE: 260.32432430051296 Protein: PTEN x_train_column_count: 886 x_train columns: ['CYP27C1', 'ZP3', 'HBS1L', 'VLDLR', 'HOXA13', 'CD38', 'GSTA3', 'SPSB1', 'ERMAP', 'TMEM116', 'CTAGE10P', 'FAM161A', 'GPX3', 'SNAP23', 'ZNF177', 'LRRC74A', 'NUP153', 'PIFO', 'METTL21A', 'HIST1H2BM', 'SAP30BP', 'TELO2', 'VASH2', 'ZMAT3', 'LMBR1', 'SRPK2', 'ZNF831', 'ZNF770', 'EEF1B2', 'ZNF320', 'C20ORF141', 'RNU6ATAC', 'ZMYM2', 'SLC7A10', 'WNT5B', 'SNTA1', 'LOC401463', 'GRAMD1B', 'IGLL1', 'PPP1R10', 'KCNMB1', 'BLNK', 'SART3', 'LINC00628', 'IFT122', 'IFNGR1', 'FAM27L', 'EMILIN2', 'CNTNAP5', 'CACNG4', 'PLEKHB2', 'C1ORF53', 'TRNT1', 'SLC22A12', 'VPS33A', 'R3HDM2', 'AIFM1', 'GUCY1A3', 'CPNE8', 'DUX4L6', 'GAS7', 'CNNM2', 'PWWP2A', 'RHOT2', 'SERPINB3', 'C9ORF16', 'AKNA', 'PCSK2', 'COL6A3', 'FOXQ1', 'CDH11', 'LAMB2', 'TMEM91', 'POMK', 'ANKRD13A', 'CYSTM1', 'CCDC25', 'ANAPC10', 'LINC00518', 'GBGT1', 'TCP10L', 'RASA3', 'PLCZ1', 'SPEG', 'POLB', 'RNF115', 'ATAD3C', 'FAM173A', 'C12ORF74', 'BMS1P6', 'ARF3', 'TARM1', 'ACTL8', 'CFL2', 'ZRSR2', 'RBFOX2', 'BRI3', 'HMGB3P1', 'PNPLA1', 'DLGAP2', 'FRAT2', 'CARD11', 'TCF3', 'FAM189B', 'SPON1', 'CACNG5', 'RFX3', 'VCX3B', 'LINC00893', 'ZNF700', 'OR4K14', 'UBE2D4', 'TEKT5', 'HIST1H3F', 'PRKCD', 'ZNF311', 'RNF5', 'OR5H15', 'DDX3X', 'E2F3', 'MTL5', 'BTN3A2', 'CRIPT', 'RPL7A', 'SYT4', 'TLE6', 'GLT1D1', 'SLC30A8', 'SUSD2', 'FUT5', 'IHH', 'TENM4', 'OR1M1', 'C20ORF202', 'TMEM50B', 'LCE1B', 'BTBD6', 'SPX', 'PTRHD1', 'SUGCT', 'TJP3', 'ZNRD1.AS1', 'XKRY', 'HGSNAT', 'ARL17A', 'ANAPC7', 'ALDH16A1', 'DIP2A', 'PROSER2', 'C19ORF54', 'TAAR1', 'BRWD1', 'BCL2L1', 'CTSS', 'ARF5', 'TRIM33', 'ACTR2', 'GULP1', 'SLC22A24', 'PTPRA', 'PTCHD3', 'FBF1', 'KIAA0930', 'TMPRSS4', 'NOMO2', 'HES5', 'CLDN16', 'C19ORF66', 'DSCR9', 'RNF4', 'RNF144B', 'CEP162', 'TACSTD2', 'FAHD1', 'PIWIL2', 'ITPR2', 'SYT1', 'SNORD56B', 'DEC1', 'C21ORF91', 'DHX35', 'SNORA15', 'ZNF512', 'CDON', 'DDX24', 'SUPT20H', 'HACD2', 'AATBC', 'EVA1B', 'SLC25A53', 'PLCXD3', 'NRSN2', 'SWSAP1', 'NHLH2', 'EXOSC7', 'DUSP9', 'ABCA9', 'RASA4CP', 'RNF130', 'ZNF90', 'RPP21', 'OR8U1', 'FAR2', 'DTX1', 'GK', 'TK2', 'LINC01548', 'DHRS7', 'AKAP8L', 'SH2D5', 'TIMM13', 'CCDC24', 'CABIN1', 'SV2B', 'AFP', 'MAP1A', 'TTC37', 'AMT', 'FAM53A', 'TRDN', 'CEP44', 'OR2W3', 'TERT', 'MTMR14', 'RMDN3', 'TNNT3', 'MPC1', 'DPP7', 'OLIG1', 'MRPL46', 'ZNHIT6', 'PPP1R27', 'LOC646471', 'DSC1', 'C2ORF73', 'NEGR1', 'B3GNT2', 'CENPA', 'RCCD1', 'CCKAR', 'CXORF66', 'NFYB', 'HPYR1', 'SUFU', 'RDH13', 'CMAHP', 'KRTAP11.1', 'DSCR8', 'KLK6', 'CXORF40A', 'TMEM14C', 'COX19', 'EP400', 'GNG5', 'C2ORF44', 'SPACA6P', 'OTOR', 'SCN2B', 'LIN9', 'MSX2', 'SPATA33', 'SMCR5', 'PIEZO1', 'SGOL2', 'TIMM10B', 'MBLAC2', 'NKX2.5', 'STATH', 'HTR1D', 'INTU', 'BCAR3', 'GINS1', 'TTC23L', 'TSGA10', 'IL13RA1', 'RANBP3', 'OGDH', 'USH2A', 'NFIB', 'GSTK1', 'POLE2', 'ROPN1L', 'ADAMTS2', 'ADIPOR1', 'MPDZ', 'TMEM17', 'SLC25A48', 'METTL2B', 'RPL19', 'LCE1E', 'USP17L2', 'MYCL', 'SNAR.I', 'CAPNS1', 'SNORA74A', 'PAXIP1.AS2', 'TMEM79', 'CMC2', 'KCTD2', 'MYADM', 'UBE2Z', 'DUSP3', 'RPS6KA6', 'FAM102A', 'DNAJB6', 'UGDH', 'PDILT', 'SNORD113.2', 'SIAE', 'DEFB121', 'CCDC112', 'LINC00982', 'CNOT1', 'OR10Q1', 'OR5B21', 'ZNF592', 'FOXL1', 'PCDHGB8P', 'CHP2', 'EPB41', 'PCF11', 'SNORD115.9', 'PCP4', 'SSR4', 'TNFRSF10A', 'FRG1', 'DNAH3', 'NAT8B', 'FAM183CP', 'CALHM2', 'ARID1A', 'CDH20', 'ICOS', 'TRMT13', 'ATG7', 'AP2M1', 'RFPL1S', 'BOLL', 'HOXC9', 'KCNH6', 'DNAJC22', 'PRAMEF11', 'SC5D', 'TMEM47', 'CHN1', 'DUX4L1', 'DEF8', 'HORMAD1', 'ANKRD30BL', 'SHISA3', 'PSMD3', 'ARL10', 'MAN2B2', 'TFAMP1', 'AP1S3', 'TCP10', 'NR4A2', 'LOC220729', 'HLA.DMB', 'DMTF1', 'ZNF765', 'PGAP2', 'CFH', 'BLOC1S5', 'TAAR2', 'CASD1', 'PQBP1', 'C1QB', 'C3ORF79', 'PLEKHH1', 'TMTC1', 'RLF', 'COLGALT2', 'EAF2', 'FGD4', 'ANKS4B', 'DYDC2', 'PTX4', 'RAB6A', 'ARHGAP33', 'ERH', 'ADAMTS15', 'C1ORF186', 'DTX2P1.UPK3BP1.PMS2P11', 'ADI1', 'ARMC10', 'HBZ', 'SLC16A11', 'LACTB', 'UGP2', 'SNORD116.10', 'DNA2', 'ZG16', 'ZBTB7B', 'BREA2', 'C6ORF10', 'LRRC40', 'IP6K3', 'SSX3', 'HOMER3', 'CRCT1', 'UBE2Q2P1', 'BACH1', 'LILRA4', 'FNDC5', 'IRF8', 'MRPS7', 'RPTOR', 'TNFSF4', 'PCBP2', 'ISCA1', 'FBXO41', 'TBC1D23', 'TEAD1', 'APBB2', 'SNORA11', 'SELO', 'DLG1', 'RNF148', 'JAKMIP2', 'TMEM25', 'ACOT4', 'ZNF532', 'T', 'DSCAM', 'AP2A1', 'SLC43A3', 'DYNLRB1', 'CETN1', 'CYP46A1', 'EN1', 'ZFP64', 'TSPAN3', 'LAMA1', 'ZP4', 'CCDC57', 'SLC7A8', 'TMLHE', 'CCM2', 'PCDHB7', 'PRR32', 'SNAI2', 'TTTY17A', 'AURKAIP1', 'UG0898H09', 'LRRFIP2', 'REG4', 'INTS10', 'PUS7L', 'HOXB6', 'APOL4', 'KCTD18', 'NR1I2', 'SLC26A4.AS1', 'KLRD1', 'CEP41', 'LINC00669', 'WDR63', 'LAX1', 'CCR4', 'SSTR4', 'LINC00152', 'TUBAL3', 'SERPINE1', 'STRN', 'RXFP2', 'SOWAHD', 'ADCK4', 'SLC2A9', 'EXPH5', 'OR4X2', 'CRMP1', 'BOD1L1', 'MARVELD1', 'ZSCAN23', 'ABCG2', 'MKRN3', 'PNMA5', 'HIGD2A', 'ANKRD32', 'SNORD115.45', 'MAGEB18', 'TSPAN2', 'ASB12', 'EIF3C', 'TM6SF1', 'USP48', 'MBP', 'MSR1', 'CACNA2D4', 'SMNDC1', 'DAPK2', 'SOCS2', 'PTPN11', 'ALG3', 'PABPN1', 'PAK1', 'HIST1H3E', 'PRDX3', 'C7ORF49', 'C15ORF57', 'STAU2', 'ACTL9', 'HLA.DQA1', 'TPM2', 'OR10G9', 'SLC30A7', 'SMIM7', 'MEG8', 'TRPS1', 'AGPAT2', 'IGFL1', 'MANEAL', 'HMBOX1', 'CSRNP2', 'NT5C1A', 'UGGT2', 'OCLM', 'AARS', 'SNX15', 'MT1L', 'MAU2', 'GALNT15', 'CRIP3', 'OTC', 'SLC45A4', 'CDK10', 'TARBP2', 'RASA2', 'LOC727896', 'PRPF38A', 'CENPP', 'PIK3C3', 'SLC22A25', 'TGFBRAP1', 'SEL1L2', 'PPRC1', 'NLRP5', 'DPP4', 'KIF1A', 'NUFIP1', 'DACT2', 'NDUFS2', 'DNMT3L', 'ZZZ3', 'C7ORF66', 'LINC00523', 'PPP1R11', 'TSPO', 'FKBP6', 'EEF1A1', 'RHOBTB3', 'FAM214A', 'ARHGEF2', 'STRBP', 'SPATA31D5P', 'SNORD62A', 'CMTR2', 'WSB1', 'KRTAP9.8', 'KCTD20', 'SUN1', 'TMEM59', 'THEM4', 'KCNA7', 'ZNF576', 'IRX2', 'ERCC6', 'ZP2', 'UBA6', 'A1CF', 'TRAT1', 'TP53', 'C9ORF85', 'ZNF518B', 'SLC43A2', 'BTBD8', 'MROH5', 'TSSC4', 'RNASE11', 'PYGM', 'WFDC10A', 'C7ORF61', 'ZNF92', 'PRDX6', 'F2', 'TACO1', 'OR7E156P', 'TMEM183A', 'QSOX2', 'MUC2', 'SMAD6', 'CRIP2', 'UCHL5', 'VWCE', 'RPS9', 'C9ORF153', 'ATP13A3', 'CPSF3L', 'ACTRT2', 'DCLK1', 'ADAM18', 'GALNT13', 'ZNF853', 'C15ORF61', 'PADI2', 'FGB', 'HOXB13', 'KRTAP19.6', 'TDRD5', 'TMEM18', 'IGF2', 'PDCL', 'CAV3', 'CHM', 'UNK', 'OR10X1', 'SFSWAP', 'GPR183', 'TRAM2', 'SNORD88A', 'COTL1', 'BTN2A2', 'TSHB', 'PCAT4', 'SPEF1', 'DNHD1', 'PRPF31', 'PFAS', 'MEX3D', 'XRCC6BP1', 'MAX', 'POM121', 'MAGEA6', 'NUMB', 'PTK6', 'IARS2', 'FBRSL1', 'POR', 'C6ORF48', 'ZNF687', 'MAGEB10', 'SMIM11', 'RNF113B', 'PDPK1', 'ANKDD1A', 'OOEP', 'SPACA3', 'CSN1S1', 'ATP1B1', 'GATA3', 'IDO1', 'TRAP1', 'EPHA6', 'CCBL1', 'GLS', 'PRSS55', 'EFHD2', 'GBP7', 'IFI27', 'MED11', 'FUT10', 'LRFN2', 'NDUFA10', 'OSGEP', 'QTRT1', 'MMP8', 'BACE2', 'CMTM8', 'FUNDC2', 'TRAPPC6B', 'RGN', 'NCAPD3', 'IFRD1', 'NUFIP2', 'LYN', 'BRD8', 'SHFM1', 'ARX', 'DCAF16', 'FCER1G', 'GYPB', 'OR2G3', 'LARS2', 'NUTM2F', 'DFFA', 'ITPKC', 'OR51S1', 'LUC7L3', 'MAP3K15', 'PIM1', 'TLN1', 'C1ORF123', 'DENND5B', 'XYLT2', 'SFRP5', 'CYP4Z1', 'MCTP1', 'HELT', 'GTF2E2', 'ZNF385B', 'LMF1', 'KLHL32', 'OPALIN', 'KRTCAP2', 'CELF4', 'DPM2', 'NEUROD6', 'CAMK2A', 'MUT', 'CACNB4', 'RAB3B', 'HPGDS', 'PDXDC2P', 'RPL35', 'SLC25A5', 'PCSK7', 'SNORD19B', 'GRB10', 'LPA', 'MPZL1', 'SPAG6', 'ARGFX', 'OR2Y1', 'CEMIP', 'EZH1', 'CD9', 'GAGE2B', 'NFATC2IP', 'C2ORF69', 'OR5AU1', 'PPIAL4E', 'TCAF2', 'PCYT2', 'WNK1', 'GOLGA8CP', 'SDHAF2', 'F8', 'MAGEA3', 'RABEP1', 'CT47A9', 'MSI1', 'NEURL1B', 'TRIM47', 'PRPF4B', 'DOCK3', 'ISM2', 'ZNF704', 'ZNF746', 'FKBP1A', 'RPL19P12', 'GPR107', 'OLFML2B', 'UTP18', 'ITPK1.AS1', 'SDHAP1', 'PTPN5', 'SLC7A3', 'CYP4B1', 'CECR5', 'CYP7B1', 'RRN3P1', 'IFT88', 'MIA3', 'KCNQ1OT1', 'CD3D', 'TMED10P1', 'MFSD7', 'PTGDR', 'LRIF1', 'TBC1D13', 'ICAM3', 'PIH1D2', 'ALG14', 'SNORD59B', 'LIMS3', 'IKZF2', 'TMC6', 'FABP6', 'LIG3', 'CSF3R', 'TCEB3C', 'TANK', 'LHX9', 'ANKRD50', 'TIMM17A', 'NKX6.3', 'SPRYD4', 'TXNDC15', 'LINC00471', 'MYO9A', 'CLDN20', 'LRRC71', 'SUDS3', 'SDHAF3', 'WTIP', 'TIAM1', 'B3GNT3', 'PGBD4', 'PTER', 'ARFGEF1', 'GBP6', 'CD248', 'CAB39', 'RER1', 'DEPDC7', 'GJA10', 'APOBR', 'SUZ12P1', 'GRPEL2', 'SEPT8', 'RFX7', 'TTC9C', 'WASH3P', 'SNORD46', 'CSTF1', 'OR4E2', 'DNAJB7', 'CLDN2', 'KLHDC8A', 'PPP1R9B', 'MCHR2', 'PPIL4', 'ZMAT2', 'UTP20', 'CYP21A2', 'SH3BGRL', 'OR52H1', 'GRAMD2', 'SRRM2', 'ZNF542P', 'SH3YL1', 'CTU1', 'ERBB2', 'CCNL2', 'ST3GAL3', 'MRPS35', 'RAB35', 'DMC1', 'SBDS', 'HERC3', 'RFC3', 'LRMP', 'OXTR', 'CTLA4', 'ULK2', 'PTCD1', 'KDM2B', 'COL8A1', 'CASK', 'TEX28', 'MAGED1', 'SPATA2', 'EVA1C', 'DHX38', 'GGT5', 'TMEM233', 'POTEE', 'KRTAP19.8', 'TMSB10', 'SOD3', 'NES', 'DAGLB', 'RPLP0P2', 'TTTY2', 'KLF14', 'CRLS1', 'SNX24', 'ODC1', 'C22ORF31', 'RPL9', 'WNK4', 'RNMTL1', 'FGFR2', 'TDGF1P3', 'ZNF432', 'FRY', 'LOC100129550', 'HNRNPL', 'C6ORF106', 'REL', 'OR1I1', 'ZPLD1', 'IQSEC3', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 0.8292125097159042 Spearman Correlation: 0.7882599584751815 Coefficient of Determination: 0.6875832766425638 RMSE: 0.3140034419605462 NRMSE: 0.06074037487630497 MAPE: 431.3314429306328 Pearson Correlation: 0.087541638235505 Spearman Correlation: 0.24118535291649934 Coefficient of Determination: -1.4179464475328358e+20 RMSE: 8878081720.837517 NRMSE: 1388176330.3631485 MAPE: 794180051633.567 Predictor: ElasticNet Pearson Correlation: 0.5458579777258941 Spearman Correlation: 0.5278264430128952 Coefficient of Determination: 0.255312167907752 RMSE: 0.48479083502417525 NRMSE: 0.09377724292482499 MAPE: 375.0491586357564 Pearson Correlation: 0.24000289805112585 Spearman Correlation: 0.21874836344592824 Coefficient of Determination: 0.0500636072885442 RMSE: 0.7266687548756254 NRMSE: 0.11362188333603712 MAPE: 847.6905965075155 Predictor: RandomForests Pearson Correlation: 0.4596479941169801 Spearman Correlation: 0.4319563272348848 Coefficient of Determination: 0.12059748903618883 RMSE: 0.5268186276940013 NRMSE: 0.10190703878327169 MAPE: 315.72837200864655 Pearson Correlation: 0.18839327234890538 Spearman Correlation: 0.21450917655994503 Coefficient of Determination: 0.020451254986305067 RMSE: 0.737908053296928 NRMSE: 0.1153792593693891 MAPE: 518.9273092002088 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['FAM71E1', 'TRAF3', 'MUC5B', 'SNORA28', 'LYRM7', 'TBATA', 'MRGPRE', 'AADACL2', 'EIF1AX', 'TTC19', 'TINAGL1', 'NFXL1', 'PABPC1L2B', 'SNORA34', 'CCDC60', 'INTS7', 'TAF1L', 'OR1A2', 'FANCA', 'DUSP2', 'SEMA3B', 'C4ORF29', 'AGO1', 'C14ORF37', 'HIST2H3D', 'CDC42EP4', 'MTHFD1L', 'ZSCAN12P1', 'CDKN3', 'CFAP126', 'CD200', 'TTC39A', 'GOLGA3', 'C2ORF40', 'DSG3', 'MAPK11', 'SUOX', 'TOB2P1', 'RPS14', 'TMEM223', 'PIK3AP1', 'NF1', 'DHX15', 'STYK1', 'DNAL4', 'FAM167A', 'TMEM125', 'PCBP4', 'INTS4P1', 'CORO1C', 'IGSF11', 'CDC73', 'WRNIP1', 'CD244', 'LOC399815', 'KIAA0408', 'KLHDC8B', 'MGAT5', 'KRT12', 'SLC4A3', 'P2RX6', 'SNAR.E', 'ETAA1', 'DNAJA4', 'USP22', 'GDF7', 'PPP1R3F', 'ICA1L', 'BMI1', 'SERPINA3', 'LINC01001', 'RTN4RL1', 'DYSF', 'COG2', 'SMPDL3A', 'CCL7', 'TTC38', 'COL5A1', 'SNX13', 'ACYP2', 'FAF2', 'DNAAF3', 'SSX9', 'IGFL4', 'BCAS3', 'TCF15', 'RASA4', 'FAM41C', 'SNORD114.18', 'ZAR1L', 'IL4', 'NDRG2', 'CHGA', 'ADCY7', 'DEFB110', 'SNORD115.48', 'RBBP5', 'PTGER3', 'LOC100133331', 'ZNF48', 'ALG3', 'RPS26P11', 'C14ORF1', 'LINC00488', 'LINC00176', 'SAV1', 'ENKD1', 'OXSM', 'ITFG1', 'GAB3', 'MITF', 'MC1R', 'XPNPEP2', 'PWP2', 'ZNF257', 'WTIP', 'MSANTD3', 'PRAMEF22', 'GALR1', 'METTL23', 'EIF1AD', 'TKTL2', 'RBMY1B', 'EPHA8', 'RAD54B', 'TLR3', 'MFSD8', 'ARHGAP21', 'CES4A', 'NCR2', 'MAPK8IP1', 'CPLX2', 'PPP4R2', 'FURIN', 'SMIM7', 'SNORD45A', 'FLNB', 'TPBG', 'SLC6A17', 'RMI1', 'PRAMEF8', 'SLC35G2', 'CCDC85A', 'AASDHPPT', 'OR51B5', 'SH2B2', 'DUSP14', 'GPR19', 'OCM2', 'BTF3P11', 'CD300A', 'F2', 'SUGT1', 'GDAP2', 'CCDC181', 'LRRC1', 'SCN4A', 'MTCP1', 'TMEM218', 'POMGNT2', 'PRDM11', 'EGR1', 'ZNF83', 'KRT8P41', 'EGF', 'CUL2', 'ADGRF4', 'AMICA1', 'SLC30A2', 'ITIH2', 'BAG5', 'STAM2', 'SI', 'TARSL2', 'P2RY4', 'SEPT7P2', 'CT47B1', 'FAM43A', 'NDUFA13', 'CYBRD1', 'TPM1', 'DBI', 'SNORA38', 'TCAP', 'GPAM', 'ADAMDEC1', 'ST3GAL1', 'HIBCH', 'TPI1', 'SNORD59A', 'KRT222', 'TREML4', 'UBQLNL', 'DYNC1LI1', 'CARD16', 'MAF', 'RBBP4', 'CLN8', 'ZNF263', 'UTP6', 'ZNF285', 'SLFN13', 'SNORD9', 'LINC00998', 'C9ORF156', 'ABCA12', 'GEMIN5', 'CLDN1', 'LTA4H', 'CX3CR1', 'HCFC1R1', 'HMCES', 'FGD5', 'ALS2CR11', 'BCCIP', 'SCARA3', 'SMNDC1', 'CPEB3', 'PCOLCE', 'MAGEE1', 'TMEM207', 'PEX10', 'ATP6V1C1', 'UBAC1', 'CUEDC2', 'SMOC1', 'GAGE1', 'LOC100133920', 'GUSBP2', 'SLC35A5', 'PCDHGC4', 'LRIT1', 'CMTM4', 'SCGB1A1', 'IL22', 'BACH1', 'FOXO3', 'METTL11B', 'PDP2', 'CRYZL1', 'FAM212A', 'ROM1', 'NPHP1', 'G2E3', 'UNC93B1', 'ZNF687', 'DOK5', 'TTI2', 'SLC39A13', 'TSPAN6', 'CD68', 'PAK1', 'YBX2', 'NUPL1', 'RFPL3', 'TBPL2', 'DISC2', 'NINL', 'MRPL23', 'FOXL2NB', 'ZBTB10', 'LOC148696', 'ZNF236', 'STEAP1B', 'USP14', 'TIMM44', 'ITM2B', 'GAL', 'TINAG', 'OR1K1', 'PITHD1', 'SKINTL', 'WNT9A', 'CIAPIN1', 'SH3RF1', 'RANBP10', 'TPP2', 'MTFMT', 'METTL1', 'EYA1', 'ACSL1', 'ADM', 'NRIP1', 'COA3', 'LHX5', 'ELN', 'ZNF90', 'CRNN', 'STX10', 'PADI1', 'CYFIP2', 'PCIF1', 'NXF2', 'RPL12', 'CNTN4', 'PIGM', 'SPINK14', 'PLOD1', 'CNTRL', 'MARCH6', 'MCM2', 'SCOC', 'CDCA5', 'BCORP1', 'CP', 'LINC00917', 'YAF2', 'C8ORF82', 'CRELD1', 'PCDH15', 'TMX3', 'WNT8A', 'CCNH', 'MFSD4', 'FAM65A', 'RBM4', 'MPV17L', 'HIAT1', 'HPSE', 'C9ORF47', 'MGC16275', 'TEAD4', 'C9ORF171', 'DCBLD1', 'OSCAR', 'GPM6B', 'IL1RL1', 'NLRP6', 'HSCB', 'SLC2A14', 'SLC12A8', 'PDE9A', 'SLC4A2', 'NTN4', 'FIZ1', 'OR13C2', 'KLHL42', 'ZNF600', 'WDR37', 'FAM58BP', 'RSU1P2', 'SIRT6', 'NDUFB1', 'DDX20', 'ATG9B', 'MARCH9', 'NOL4L', 'TOPAZ1', 'SFPQ', 'KANK2', 'MED22', 'TMEM88', 'WNT2', 'PCDHA11', 'TMED5', 'CKS1B', 'GAB2', 'ZNF324', 'UGT3A1', 'BSPRY', 'ATG16L2', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.5297335255227342 Spearman Correlation: 0.5076510209401641 Coefficient of Determination: 0.23275334402517533 RMSE: 0.16800024590710586 NRMSE: 0.10823014714582437 MAPE: 175.32029576185892 Pearson Correlation: -0.02190104564528543 Spearman Correlation: 0.17818742464853354 Coefficient of Determination: -8.387403290107645e+25 RMSE: 1905905036212.361 NRMSE: 1851633653818.9285 MAPE: 460605939450664.56 Predictor: ElasticNet Pearson Correlation: 0.23825785390699733 Spearman Correlation: 0.23278650391398073 Coefficient of Determination: 0.029736123144440407 RMSE: 0.18892409334344742 NRMSE: 0.12170983626570941 MAPE: 108.6191912947391 Pearson Correlation: 0.16398595560106285 Spearman Correlation: 0.1434415771120011 Coefficient of Determination: 0.016002748029657732 RMSE: 0.20643552572436064 NRMSE: 0.20055719435773542 MAPE: 133.52957255634502 Predictor: RandomForests Pearson Correlation: 0.39023057150232043 Spearman Correlation: 0.3379989101613264 Coefficient of Determination: 0.08745271541790667 RMSE: 0.1832188293099682 NRMSE: 0.11803435613462278 MAPE: 115.56903925709068 Pearson Correlation: 0.11611175257220642 Spearman Correlation: 0.14229853240065338 Coefficient of Determination: 0.011502798663815428 RMSE: 0.20690701575172785 NRMSE: 0.20101525852437832 MAPE: 127.27406491537042 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['GPR87', 'C20ORF195', 'TRPS1', 'ALDH5A1', 'PDCL', 'COPS4', 'LUZP1', 'SIAH3', 'SIL1', 'ALAD', 'BCL9', 'ABCA8', 'C4ORF33', 'ALX1', 'C11ORF80', 'GTF2H3', 'PVR', 'SIN3A', 'C16ORF82', 'KCNQ3', 'EHD1', 'GRM6', 'GTF3A', 'VBP1', 'SRCIN1', 'RFNG', 'GPANK1', 'CALCRL', 'CACNG3', 'PLA2G5', 'OR2W1', 'SYT6', 'GRM3', 'SLC9A1', 'MKI67', 'ARSJ', 'SLC25A5.AS1', 'FGD2', 'GOLGA6L5P', 'ZNF99', 'DMRT2', 'GNAS.AS1', 'PQLC2', 'USP2', 'NPHS1', 'OR51B6', 'GJA1', 'MYH2', 'SOX13', 'HDAC10', 'ATP6V1G2', 'MYO18B', 'ZBTB42', 'MS4A2', 'SH3D19', 'EIF4E1B', 'ETV3', 'LRRFIP1', 'DIP2B', 'NCSTN', 'MTMR8', 'DMRT3', 'RPL18A', 'KLHL2', 'TUBD1', 'FTHL17', 'ACVR2B.AS1', 'PTGES2', 'CAPN12', 'USP18', 'SLC27A4', 'TAS2R30', 'S100A16', 'ZNF740', 'SLC2A7', 'TLE6', 'RPLP0P2', 'RIPK4', 'OR2D2', 'IL6', 'COL1A1', 'JAM2', 'LOC100270804', 'SHC1', 'MYOT', 'TRUB1', 'ORMDL2', 'CLLU1', 'ICAM3', 'MYCNOS', 'ZMYM6', 'VN1R1', 'TDO2', 'PTCH2', 'WWC1', 'PARP14', 'CCDC129', 'MS4A6A', 'EYA3', 'DNAH8', 'NF1P2', 'NSUN6', 'DUOX1', 'HCG9', 'KBTBD6', 'GRIP2', 'LRIG3', 'BPNT1', 'KCNN4', 'COL7A1', 'WIBG', 'TRMT112', 'TMEM181', 'METTL21C', 'OR2C1', 'SEC63', 'KIAA1671', 'CDRT15', 'LSM14A', 'PDE1C', 'APOC3', 'NIPSNAP1', 'FANCL', 'ZNF578', 'TAF9B', 'PAFAH1B3', 'ZFYVE21', 'BRD7P3', 'TCAF1', 'RRM2', 'TRIM29', 'FAM72A', 'LMNB1', 'CTAGE10P', 'ZZZ3', 'TFCP2', 'SOS1', 'BCAS1', 'SCARB2', 'LINC00593', 'ALG1L2', 'SLC47A2', 'BCRP3', 'SQRDL', 'EXOC1', 'TRPC4AP', 'MANF', 'CYLC1', 'NDRG2', 'MRPL11', 'FAM167A', 'STK24', 'ATL2', 'EIF4EBP1', 'AGR3', 'CIB1', 'LINC00623', 'C16ORF90', 'MACROD1', 'AKR7L', 'CYP3A5', 'CCDC186', 'SNORD4A', 'PPOX', 'ZC3H12B', 'PIP5K1P1', 'XPR1', 'NPR3', 'PLGLA', 'FBXW8', 'TAS2R5', 'STX1B', 'TOP1P1', 'ARHGAP25', 'SMG8', 'ACOT1', 'COMMD4', 'TAP1', 'SMC2', 'PLP2', 'CYB561A3', 'SPDYE4', 'SMAGP', 'PPBP', 'CLDN23', 'PSAPL1', 'POTEC', 'OR6A2', 'ALG11', 'RAB3IP', 'CD163L1', 'TAS2R43', 'MSH5', 'ARL16', 'TTTY18', 'FSCB', 'UCP1', 'LEP', 'FMNL3', 'PRDM15', 'SLC27A6', 'TMEM170B', 'FARP2', 'PPP3CA', 'CAMK2N1', 'LINC01341', 'FCRL3', 'FRRS1', 'ZBTB16', 'BCLAF1', 'SNORD116.1', 'ZSWIM7', 'DNAJC22', 'TIGIT', 'C4ORF19', 'ZNF84', 'LRRC20', 'SEC23B', 'ELK3', 'C17ORF98', 'BACE2', 'USP32', 'TRAPPC2', 'HMP19', 'DNAJC21', 'CEP41', 'OR8J1', 'PNO1', 'ZSWIM8', 'C15ORF56', 'MAGEA3', 'LIG4', 'EXOC4', 'CMAS', 'ZNF569', 'ATP6V0E2.AS1', 'OR5AK2', 'CDC42EP5', 'LCE3E', 'NAT6', 'ALG12', 'TAS2R60', 'UBALD1', 'TTTY9B', 'C21ORF2', 'ZFP64', 'RDH16', 'WNT8A', 'ZNF433', 'ZIM3', 'LOC440461', 'LIN28B', 'AGK', 'SLK', 'OR2T10', 'ZMAT3', 'ZNF416', 'EDA', 'PRSS41', 'OCRL', 'VCP', 'CCDC137', 'SAMD1', 'UGT2B7', 'WDR24', 'LINC00483', 'NADSYN1', 'HOXD8', 'SSB', 'HPDL', 'PRR20B', 'RPL13AP17', 'RFTN2', 'CIAPIN1', 'LINC00471', 'LINC01102', 'MAGEC1', 'ZNF560', 'NCBP2.AS2', 'GLE1', 'TMEM30C', 'MCM6', 'SLC9A8', 'GATB', 'PCOLCE2', 'SSX4', 'LOC400043', 'TFG', 'GNB1', 'EPB41L2', 'HIST2H3C', 'RHOA', 'TXLNGY', 'SSH2', 'SNORD17', 'SYCP2L', 'RNF150', 'MS4A14', 'CAND1', 'TRIM14', 'C2CD4B', 'DUSP6', 'UBE3B', 'ABCC10', 'ARMC5', 'ADAM6', 'STAU2', 'PPP2R1A', 'OR2A14', 'MMEL1', 'CBX3', 'YAF2', 'PTAR1', 'SORBS1', 'DHFR', 'LEF1', 'TIMM21', 'XG', 'GRK5', 'GZF1', 'HAUS6', 'FUNDC1', 'FERD3L', 'MIEN1', 'WDFY4', 'SFT2D1', 'SNORD45B', 'PPP4R1', 'YWHAH', 'CEP72', 'DOPEY1', 'VWF', 'ACTL7A', 'BTG4', 'TYW1', 'OR10R2', 'TACC2', 'FCMR', 'ELP5', 'LINC00319', 'PCDHB7', 'C2ORF48', 'PLCB2', 'ASTL', 'DCTN1', 'GPR176', 'SNORD36A', 'PPBPP2', 'OGG1', 'CD163', 'ACMSD', 'TAMM41', 'MKNK2', 'KLK9', 'SERPINB7', 'SRSF2', 'TMEM187', 'OR5AN1', 'ZNRD1.AS1', 'TRANK1', 'ZNF689', 'IRGQ', 'SMIM14', 'PRICKLE3', 'XAF1', 'KIAA0408', 'LOC256880', 'ZNF788', 'SRP54', 'GTF2IRD1P1', 'RPL23AP53', 'DDT', 'VGLL4', 'TRIM37', 'ITGA11', 'TANGO2', 'RARA', 'HAS1', 'STK38L', 'HSPE1', 'SGPP1', 'LRRC4C', 'ATMIN', 'DOCK1', 'C14ORF28', 'PSMD11', 'CHST10', 'ACER2', 'DICER1.AS1', 'HRH1', 'ITGAL', 'PMP2', 'CD63', 'IL10', 'ZDHHC4', 'FXN', 'MBOAT2', 'AGTPBP1', 'EPO', 'CALML5', 'CETN4P', 'MBNL3', 'FBRS', 'SCGB1D1', 'DNM1P46', 'CASC5', 'CCDC153', 'RNF168', 'ACVR1', 'CYFIP2', 'ARHGEF15', 'PIK3C3', 'TMEM5', 'GGH', 'NCKAP1', 'OST4', 'BTN3A2', 'VCX', 'AATK', 'NDP', 'TPCN2', 'PEBP4', 'PGM5', 'CABLES1', 'BPIFB3', 'CLDN19', 'KLLN', 'EMILIN3', 'ZNF347', 'SRRT', 'NELFB', 'ADGRE4P', 'SMAP2', 'ILKAP', 'JDP2', 'PDE7B', 'RBM25', 'CPT1C', 'CHURC1', 'BRK1', 'SYNDIG1', 'CFL1P1', 'TSC22D3', 'SUV420H1', 'BCAR4', 'IGIP', 'ZAK', 'CASC2', 'IZUMO2', 'SPAM1', 'FBXO24', 'C11ORF49', 'MYCN', 'C5AR2', 'VPS26A', 'SEPT9', 'COG4', 'BRF2', 'ANKRD33', 'ARHGEF10L', 'OR10A4', 'MOV10L1', 'C9ORF57', 'HFE', 'NPAS1', 'PKD1', 'OSTC', 'KLHL36', 'CXCL8', 'CITED1', 'STRA8', 'EPHX2', 'SPTAN1', 'PHF21B', 'KRTAP10.4', 'ETFA', 'OR5B12', 'KLHDC9', 'LEUTX', 'UHRF1BP1', 'ZSCAN5B', 'COL4A6', 'IFITM1', 'CCR6', 'YWHAB', 'MTIF3', 'SNORD115.9', 'MTIF2', 'SDE2', 'BDH1', 'CDC20B', 'SS18', 'JRKL', 'INSL4', 'DCHS1', 'TXNIP', 'NRBP1', 'RGSL1', 'ANXA8', 'DYNLRB1', 'UBL3', 'TMBIM6', 'TREML5P', 'KIAA1467', 'HNRNPUL1', 'PAGR1', 'NPY', 'DBH', 'SNORD113.1', 'CYS1', 'EFNB2', 'PARD6A', 'PGAM5', 'RASAL2', 'VPRBP', 'CNGB1', 'MRPS35', 'MYO10', 'CCL28', 'HEXIM2', 'GPRASP1', 'HMGCL', 'IQCF6', 'HSPA13', 'ADGRE1', 'FETUB', 'EIF3B', 'IFRD2', 'PTMS', 'RHBG', 'KLF3.AS1', 'PIGO', 'RNF157', 'TNFRSF1A', 'KCNN3', 'GPHN', 'TRDN', 'DPY19L2P1', 'CAPZA2', 'ARID3A', 'CNN3', 'ROGDI', 'SULT2A1', 'CTSH', 'C17ORF89', 'STIM1', 'ADAT1', 'PSMA7', 'FBXW7', 'PPEF1', 'CCT3', 'OARD1', 'LSMEM2', 'RPS13', 'OR9A4', 'UCP2', 'CCDC51', 'CHDH', 'ABHD11', 'C9ORF163', 'SNORD113.7', 'TMEM59', 'EMILIN1', 'GPSM1', 'SUPT20HL2', 'VPREB1', 'ANKRD9', 'SPCS2P4', 'MED13L', 'NDN', 'C5ORF24', 'USP22', 'ACVR2B', 'PTPN1', 'CAND2', 'GDI1', 'ZFP92', 'GRM5', 'KCNC3', 'ADAMTS7', 'METRNL', 'ERGIC1', 'INTU', 'OSBPL2', 'NFU1', 'PDCD2L', 'IFNG', 'LINC01465', 'HADH', 'HIVEP3', 'SNX16', 'PI4KB', 'COX5B', 'KREMEN1', 'APOM', 'UBTFL1', 'PCBP2', 'ADHFE1', 'EPB41L1', 'UBC', 'C1QL4', 'RHNO1', 'DHCR24', 'COL11A2', 'FADS2', 'MYO3A', 'FOPNL', 'VCY', 'LRFN4', 'UCHL5', 'DOK6', 'PHIP', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.7219592456750685 Spearman Correlation: 0.6842489015642582 Coefficient of Determination: 0.48837074262105307 RMSE: 0.4820683258722556 NRMSE: 0.10897893655979554 MAPE: 377.4937248287114 Pearson Correlation: 0.17475923788894995 Spearman Correlation: 0.26155964204627624 Coefficient of Determination: -2.0128328256450314e+24 RMSE: 894766528026.1749 NRMSE: 269589191933.1651 MAPE: 28950968343643.24 Predictor: ElasticNet Pearson Correlation: 0.58882019965657 Spearman Correlation: 0.5124701154147945 Coefficient of Determination: 0.3192582122798735 RMSE: 0.5560605909518868 NRMSE: 0.12570602259565652 MAPE: 316.78776167929374 Pearson Correlation: 0.3720262797652788 Spearman Correlation: 0.2649434531602639 Coefficient of Determination: 0.12324647413993162 RMSE: 0.5905336322458883 NRMSE: 0.17792516789571808 MAPE: 158.75029927903114 Predictor: RandomForests Pearson Correlation: 0.5106469679058335 Spearman Correlation: 0.40029195475017554 Coefficient of Determination: 0.20293177622816616 RMSE: 0.6016981266634227 NRMSE: 0.13602308729816268 MAPE: 200.4915627323912 Pearson Correlation: 0.36610629273816897 Spearman Correlation: 0.2677581251571705 Coefficient of Determination: 0.11819786792134845 RMSE: 0.5922314253472394 NRMSE: 0.1784367054375533 MAPE: 153.38105162926186 Protein: TP53 x_train_column_count: 1002 x_train columns: ['SBDSP1', 'TXNDC15', 'NOP56', 'CCDC69', 'ZNF433', 'IDE', 'FAM204A', 'FGF7', 'TBC1D2B', 'RPP21', 'ANGPTL1', 'SS18L1', 'TMEM161B', 'WBP2NL', 'APOL6', 'WNT6', 'CBX1', 'OR2T35', 'ITGA6', 'PALD1', 'DCUN1D5', 'RNASEH2A', 'METTL24', 'KATNAL2', 'HNRNPC', 'TSC22D4', 'ERAS', 'CEP97', 'GIMAP2', 'TMIGD2', 'ATP6V1C2', 'QPCT', 'LOC283332', 'NID2', 'TCF12', 'FAM126A', 'FUS', 'SLC22A20', 'LRRC75A', 'TM6SF1', 'DNAJB1', 'HOXA11', 'MS4A14', 'NUTF2', 'ZG16B', 'EXOSC7', 'MAD2L1BP', 'PINK1', 'DNAH3', 'PRAMEF4', 'UBE2F', 'C16ORF54', 'ZNF525', 'ZNF101', 'TGFB1I1', 'ARRB2', 'ITGB1', 'TAF15', 'TNRC18', 'CCDC183', 'PTPRN2', 'MBLAC2', 'TEKT1', 'ASXL3', 'GALR1', 'TOMM7', 'NSA2', 'WTAP', 'ZFX', 'CEP44', 'C1ORF111', 'FAM169B', 'GPR52', 'BPIFA2', 'ANKRD66', 'MPP4', 'GSDMB', 'CHCHD10', 'KC6', 'CCBL1', 'KCTD16', 'PSMB2', 'CDKN2AIP', 'KAT6A', 'MARCH6', 'EXOSC1', 'UGT1A6', 'LINC01588', 'HAGH', 'SYS1.DBNDD2', 'FABP5', 'PDE7B', 'OTUD7B', 'GJA3', 'KRTAP19.7', 'CDC16', 'MAP3K5', 'DIRAS1', 'ESYT3', 'LUZP2', 'CELF6', 'GNMT', 'SPIN3', 'ZDHHC5', 'LOC400736', 'ACTA1', 'MESDC2', 'UBN1', 'TMEM86B', 'MT1E', 'BATF2', 'SPAG4', 'GCNT7', 'ARHGEF15', 'GIT1', 'IQCC', 'NOX4', 'CDC42SE2', 'C9ORF173', 'CHRFAM7A', 'IKBKG', 'LOC493754', 'CPOX', 'BEST2', 'RNF185', 'GC', 'NRM', 'MYL6B', 'ARSJ', 'TCEB2', 'IL27RA', 'HSPA6', 'SCARNA23', 'GUCY1A2', 'RAX2', 'YPEL4', 'FAM47C', 'TMEM69', 'GOLGA8F', 'IRGM', 'KIAA0754', 'PP7080', 'AKIRIN2', 'UGT2B11', 'MRGPRD', 'EPHA1', 'PLEC', 'S100A9', 'OR4X1', 'UQCRHL', 'CABYR', 'ARL15', 'MTMR2', 'SLC8A1', 'ADAM9', 'NME4', 'ZFAND5', 'NUCB1', 'OR4C16', 'NR2F6', 'SNORD116.8', 'GGT1', 'OSR1', 'ZNF16', 'HHIP', 'DEDD2', 'ABCD2', 'HEXIM1', 'PPM1A', 'SLC12A2', 'ZNF805', 'SLC16A4', 'PIGP', 'LRRN4', 'ADH4', 'EFHC1', 'ZSWIM3', 'AURKB', 'ZKSCAN1', 'CSN1S2AP', 'RASL12', 'NFE2L3P2', 'TFAP4', 'RBMY1E', 'FABP9', 'C17ORF50', 'SOX8', 'QSOX1', 'STK17A', 'MYCL', 'ZNF608', 'APH1A', 'STEAP1B', 'YIPF4', 'TMEM189', 'SMG6', 'KLC4', 'KCNS3', 'MMS19', 'WASF2', 'THAP1', 'KRT37', 'C3ORF35', 'ZADH2', 'PPIF', 'RASGRP3', 'MAGEA5', 'CTSZ', 'GIP', 'CIRBP', 'HES4', 'FIG4', 'PCDH9', 'ZNF154', 'DHX57', 'AP3S2', 'GJD4', 'TMED8', 'MAGEA4', 'RASGEF1C', 'TKTL2', 'GLIDR', 'TOP1MT', 'MEP1A', 'WIPF1', 'STRN3', 'SNORA36C', 'HLF', 'TTYH1', 'SLC35E3', 'SHE', 'PPAPDC3', 'KIF1BP', 'VPS54', 'ZNF879', 'FAM183CP', 'SNORD32B', 'NFE2L3', 'FOXP1', 'NIPAL4', 'TAS2R46', 'TOP2B', 'SYNPO', 'GIPR', 'SCG5', 'LRRC37B', 'SLC10A1', 'ARL14EP', 'SMIM19', 'MTAP', 'ZNF561', 'PRSS42', 'TIMM21', 'SZT2', 'NAP1L6', 'LRRTM2', 'LINC00469', 'RNF19A', 'TACC3', 'SV2C', 'CAV1', 'DYX1C1', 'OR6S1', 'FAM124A', 'NARF', 'CADPS', 'IFNG', 'SYPL2', 'RAB8B', 'CATSPER3', 'FAM173A', 'LOC284661', 'EIF2B5', 'ARIH2', 'PRAMEF14', 'CTSW', 'OR52B6', 'LBH', 'SNORD29', 'OCIAD1', 'AUP1', 'BEX5', 'EFNB2', 'PI4KB', 'CYP2A6', 'MAFG.AS1', 'LOC152225', 'HERC2P2', 'ALG9', 'CCDC142', 'OR1N2', 'TMEM38A', 'DTX3L', 'VCP', 'C1ORF189', 'SLC6A20', 'MYLK4', 'TBL1X', 'SPTBN5', 'NOP10', 'ZSCAN22', 'EGR3', 'LMO3', 'FOS', 'IL21', 'WDR87', 'NPTX2', 'DCLRE1B', 'N4BP2L2', 'HSDL1', 'KCTD9', 'GSTA2', 'NOSIP', 'ZPLD1', 'MLF1', 'FAM182A', 'FRA10AC1', 'CEP112', 'GAS2L1', 'CCDC42', 'OR2B6', 'PIGN', 'SRXN1', 'NDUFB11', 'PDE3A', 'C1ORF116', 'MED18', 'SLC1A2', 'NKX6.1', 'PAGE2', 'RYK', 'AADAC', 'ALDH18A1', 'OAZ3', 'POF1B', 'TREML2', 'PTCHD2', 'ZNF580', 'BUB1', 'DYRK4', 'NT5M', 'INTS3', 'GRAP', 'CEBPD', 'IP6K2', 'GDF3', 'PCDHB7', 'LOC100132287', 'LCE2B', 'RHOG', 'PRTN3', 'DHFR', 'AMHR2', 'WBSCR28', 'CELF3', 'LTBR', 'RCAN3', 'LRRTM3', 'KCNV1', 'A2M.AS1', 'MRPL44', 'ZIC3', 'DPH5', 'ELN', 'PSIP1', 'HMBOX1', 'KDM8', 'DNAJC27', 'ENOX2', 'SPATA31D5P', 'ZBTB9', 'GPR62', 'TRIP10', 'HLA.DRB5', 'NUDCD2', 'NFKBIB', 'TMEM181', 'FAM84A', 'PDIA5', 'MS4A4A', 'OR1L1', 'PAX5', 'RNF220', 'TTTY23', 'EIF4EBP3', 'SRGN', 'TST', 'NEU1', 'REEP1', 'LINC00476', 'HOXB8', 'CACNG6', 'TTC33', 'TBCD', 'SPP1', 'HIGD2B', 'C17ORF53', 'PPM1G', 'COL26A1', 'TMEM176A', 'CKAP2L', 'SLC16A2', 'TAAR6', 'OR4D6', 'SMARCAD1', 'FAM83G', 'PTPMT1', 'MKKS', 'RPAP1', 'RNF222', 'CEP126', 'ZNF140', 'NIPBL', 'SP5', 'LOC340017', 'ST6GAL2', 'NF1P2', 'SP140L', 'ABL2', 'BCAS4', 'FOXO3', 'BRINP1', 'ATXN3', 'PVRIG', 'SKOR1', 'ITGA5', 'MUSTN1', 'WDFY4', 'GAS1', 'TMCO3', 'CLCN1', 'SH3PXD2A', 'INSC', 'TRAPPC6A', 'IGFBPL1', 'EMD', 'ALPK3', 'FHL3', 'RAB8A', 'G6PD', 'BLMH', 'DTHD1', 'PTDSS1', 'SETD8', 'SPATA24', 'FBXL19.AS1', 'BAP1', 'AZIN2', 'TFAP2C', 'CATSPERD', 'PTPN7', 'VRTN', 'RAPGEF3', 'NCF1C', 'DNASE1', 'SNORD114.21', 'LANCL1', 'TAF10', 'PRR34.AS1', 'DRAM2', 'OR10R2', 'NKTR', 'PDE6C', 'SLC9A4', 'CCDC88C', 'LOC647859', 'TMEM8B', 'SLC45A2', 'SNORD115.3', 'CA7', 'TMED3', 'HSPB7', 'YTHDC2', 'PTP4A3', 'ACLY', 'LGALS13', 'FAM183B', 'ZNF223', 'CCDC85C', 'WWC2', 'NCOA1', 'HIST1H2AH', 'ABHD4', 'ZBTB33', 'MYL2', 'GALNT11', 'IFNA13', 'USP44', 'TMEM52', 'PSMD5.AS1', 'TAPBPL', 'RNF43', 'SHISA6', 'PSMA8', 'SPG20', 'ABCD3', 'IQCF3', 'CBX6', 'TDRP', 'TACSTD2', 'DAZL', 'GALNT16', 'SNORA28', 'SEZ6L2', 'PCDHB15', 'USP17L6P', 'MAPK8', 'NPNT', 'MSI1', 'CHRDL1', 'STEAP2', 'TRAPPC2B', 'HAO2', 'LINC00598', 'LINC00470', 'APBB2', 'PAFAH2', 'HAPLN1', 'APLF', 'MIR155HG', 'NPM3', 'SESN2', 'PRG1', 'NPEPPS', 'MAPK8IP1', 'RPS6KA4', 'CDHR2', 'KRTAP19.2', 'IFNB1', 'HARS', 'ADORA2A.AS1', 'TMEM114', 'C8ORF76', 'TTTY17B', 'UTF1', 'OR2L1P', 'PTGER2', 'CNTN6', 'SPNS1', 'MPO', 'MRPL36', 'DCD', 'DAD1P1', 'HRG', 'OPALIN', 'FGF11', 'CHKA', 'EIF3B', 'C10ORF105', 'PTRH2', 'LGALS8', 'SNORA31', 'TIMM44', 'PUM1', 'SYN2', 'UBASH3B', 'GALNT4', 'QSOX2', 'TNFRSF21', 'STK16', 'FTHL17', 'RIPK2', 'ANKLE1', 'ZXDB', 'PALLD', 'SLC46A3', 'MRPL23', 'PCDH17', 'MICAL1', 'GREB1L', 'PF4', 'PCYT1B', 'SFMBT1', 'ZNRF2', 'C11ORF68', 'LINC00312', 'CTNND2', 'SCO2', 'TNFSF12.TNFSF13', 'C6ORF141', 'DR1', 'RRAGC', 'TMEM30A', 'CBLN4', 'OR56A3', 'ATG5', 'SNORD115.48', 'ZNF808', 'SYNGR2', 'BLVRA', 'PCDHA6', 'SHROOM1', 'GRIN3A', 'UNCX', 'TMEM200B', 'SLC5A9', 'EBP', 'MFSD8', 'PPP2R2D', 'BAALC', 'GAB2', 'R3HDML', 'SENP1', 'KCMF1', 'SLC25A36', 'SH2D6', 'PSD3', 'DNMBP.AS1', 'LINC01465', 'NUTM2G', 'DUSP15', 'FOXD4L1', 'LINC01105', 'NME7', 'CTCFL', 'CPQ', 'KYNU', 'TUSC7', 'LYPLA2', 'TMEM143', 'ZNF138', 'PHF2', 'MDH1B', 'LINC00589', 'HENMT1', 'C19ORF57', 'RYBP', 'LINC00167', 'PRSS36', 'TRA2A', 'LYRM2', 'NRK', 'LRRK1', 'OR4D5', 'SGK3', 'C12ORF57', 'MTFP1', 'LDHC', 'AXIN1', 'KRTCAP3', 'GYG2', 'CDK5R1', 'GNPTAB', 'ASAP1.IT1', 'TTK', 'ALG8', 'KLHDC4', 'EHMT2', 'SERHL2', 'NKX3.1', 'NUFIP2', 'GRAMD1A', 'MT3', 'VDAC1', 'HPCAL1', 'FAM86C2P', 'MTHFD2', 'DPYSL2', 'LAS1L', 'HTR2A', 'H1FX.AS1', 'IHH', 'PRODH2', 'FAM155A', 'C3ORF17', 'METTL4', 'PES1', 'KIAA0753', 'MMP10', 'OR7G2', 'ZNF552', 'PXYLP1', 'CDHR5', 'FAM21A', 'TECPR2', 'SVEP1', 'GPATCH3', 'MUT', 'TMEM236', 'RIOK1', 'POLD1', 'MTO1', 'CYP2C9', 'HDAC6', 'UBR5', 'TLE1', 'C14ORF166', 'FBXO36', 'GALK1', 'OR4D11', 'FOXK1', 'RPS6KA5', 'WFDC10B', 'MRPS15', 'BAX', 'RLN1', 'TOPORS', 'SLC6A11', 'STT3B', 'CCDC103', 'PCDH11X', 'UBL4A', 'LY86', 'MECR', 'SLC6A4', 'GPRIN2', 'FERD3L', 'CAPN15', 'PA2G4P4', 'TUBD1', 'GP1BA', 'MTMR12', 'ATP6V0C', 'STARD13', 'TXLNGY', 'ATAD5', 'SLC2A3', 'TTC31', 'DNAJB8', 'SNX27', 'GOLGA6L5P', 'OR5H6', 'TBC1D3B', 'RHOBTB2', 'EDA', 'EIF3CL', 'PRICKLE4', 'BMS1P5', 'FAM129A', 'MAGEB18', 'TECR', 'CTNS', 'OR10X1', 'MASTL', 'IL36B', 'MTHFSD', 'PREX1', 'LINC00111', 'DDB1', 'HNMT', 'GPR150', 'LOC100190940', 'PLSCR2', 'ULK1', 'CYTH2', 'BVES', 'PPIAL4G', 'GEMIN5', 'FN3KRP', 'TPM2', 'GPR19', 'PDZD8', 'FCGR1B', 'TMCO4', 'ATF6B', 'CCDC121', 'MYO15A', 'GRB2', 'TEX15', 'FOXJ1', 'PIPOX', 'TCP10L', 'PRKCG', 'BRMS1L', 'ZNF19', 'SNORA41', 'ANKRD34C', 'ZCCHC6', 'LSM2', 'OR5A1', 'PPT1', 'ARRDC3', 'OR2T2', 'JADE3', 'LINC01366', 'MOSPD1', 'ERI1', 'APIP', 'RPS6KC1', 'RAB7A', 'AMELY', 'TLE3', 'IL3', 'LOC285074', 'OR6F1', 'VLDLR.AS1', 'PNPLA3', 'SLC28A1', 'TRIM47', 'CAAP1', 'CRTAP', 'KIAA1324', 'UPF3A', 'YIF1A', 'VAMP8', 'NR5A1', 'LRRC75B', 'SLC25A20', 'MAN2C1', 'LINC01600', 'C1ORF210', 'MUS81', 'FAM214B', 'GTPBP6', 'CFP', 'C20ORF27', 'TRIM26', 'ZNF579', 'SGPL1', 'KRTAP26.1', 'KIF16B', 'PAIP2', 'LOC401127', 'CHTF18', 'CNBD1', 'LRRC37A6P', 'CH25H', 'OS9', 'LOC389705', 'ZNF773', 'PAK2', 'SERF2', 'LPAR6', 'FLJ42627', 'YRDC', 'TMEM198', 'CHRM4', 'RPL11', 'TLL2', 'F2R', 'ASB13', 'CLASRP', 'RHOBTB1', 'NRADDP', 'PLEKHA7', 'TCEAL5', 'SSB', 'GRASP', 'CES1', 'CYP4F12', 'KRTAP15.1', 'RGAG1', 'DENND5B', 'HNF1A', 'AGBL5', 'KRTAP5.1', 'KCNK10', 'DXO', 'WNT8A', 'TSPAN33', 'KCNA1', 'SNORD115.27', 'TIGD2', 'SLC25A19', 'SYAP1', 'KHDRBS2', 'CXORF51A', 'PHF7', 'ZNF709', 'LGALS14', 'BCL2A1', 'DNM1P35', 'CT45A2', 'TGM3', 'TXNRD1', 'FASTKD5', 'DICER1', 'C16ORF52', 'C9ORF117', 'FIGLA', 'DLX4', 'RPN2', 'SLAMF6', 'C19ORF60', 'YME1L1', 'PITPNC1', 'WDR12', 'SOX13', 'GJB7', 'SOS2', 'VCPKMT', 'RPS13', 'ANKRD6', 'ZNF765', 'CILP', 'LSM3', 'CERKL', 'SNORD115.5', 'ZNF157', 'MEX3A', 'GJC3', 'DCAF12', 'C1ORF64', 'PYGO1', 'VPS45', 'GAGE8', 'TEX2', 'PODXL', 'BRD2', 'SLC19A2', 'CEACAM1', 'DDX28', 'KRT71', 'GXYLT1', 'STS', 'PNISR', 'DNAJC17', 'AKAP9', 'C11ORF52', 'FAM83A.AS1', 'CLCC1', 'ZNF79', 'LAIR2', 'TDRKH', 'BUD13', 'C6ORF132', 'CCDC84', 'BET1', 'TBC1D2', 'SDPR', 'MAP3K12', 'LOC441204', 'GOLPH3', 'PGLYRP4', 'DSCR10', 'SERPINB1', 'LETM1', 'FAM138E', 'KCND1', 'ALX3', 'DNAH6', 'OR1E2', 'OR7D2', 'UCP1', 'FAM207A', 'PSMC6', 'SCARNA5', 'ULK4', 'OR51B6', 'NANOGNB', 'AJUBA', 'DCHS1', 'MESTIT1', 'TIPIN', 'RPRM', 'PPM1N', 'TGFA', 'RALGAPA2', 'LAPTM4A', 'OR52J3', 'MTCH1', 'ARMCX3', 'ZMYM4', 'CHST5', 'BBS9', 'POU6F2', 'ATP5B', 'CD37', 'SEMA7A', 'UXT.AS1', 'PPP1R2P3', 'ZFP1', 'ZNF131', 'MUCL1', 'OR51D1', 'PI4K2B', 'MRRF', 'FIGNL2', 'SLC26A6', 'LOC100130691', 'SNORD116.20', 'ORC3', 'LGMN', 'HDAC11', 'SNORA70C', 'ZC3H12D', 'CD226', 'BCL3', 'KIR2DS4', 'VNN1', 'C19ORF53', 'FAM101B', 'C11ORF63', 'PRR15', 'PACS1', 'IZUMO1R', 'DPY19L3', 'USH1C', 'SMIM10', 'PITX3', 'KIAA1033', 'UNC79', 'RAET1G', 'SPOP', 'EPHX3', 'DNM2', 'MORN5', 'ZNF396', 'WDHD1', 'GTPBP2', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 0.887079376652741 Spearman Correlation: 0.8375437517701773 Coefficient of Determination: 0.7858785188450327 RMSE: 0.2082848208798554 NRMSE: 0.05005643376108037 MAPE: 480.20657052578485 Pearson Correlation: 0.01614568787760555 Spearman Correlation: 0.08195364031970474 Coefficient of Determination: -1.447069690774077e+22 RMSE: 51944525684.14298 NRMSE: 16484045977.450806 MAPE: 11567110995257.742 Predictor: ElasticNet Pearson Correlation: 0.5827299047900101 Spearman Correlation: 0.5616305554860399 Coefficient of Determination: 0.312509388640802 RMSE: 0.3732165444608239 NRMSE: 0.08969395444864792 MAPE: 897.0464070044104 Pearson Correlation: 0.32400197918968787 Spearman Correlation: 0.30444020499008717 Coefficient of Determination: 0.08704365144488768 RMSE: 0.4125913016938391 NRMSE: 0.13093148695539447 MAPE: 208.91944048721953 Predictor: RandomForests Pearson Correlation: 0.4886699626878827 Spearman Correlation: 0.5143794982802846 Coefficient of Determination: 0.2280405588868143 RMSE: 0.39548019825664354 NRMSE: 0.09504450811262763 MAPE: 823.9400082167338 Pearson Correlation: 0.3177015082416595 Spearman Correlation: 0.30790643128445894 Coefficient of Determination: 0.09318998273768087 RMSE: 0.4112001040567925 NRMSE: 0.13049000509545333 MAPE: 270.3015922396461 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['FCGBP', 'ALOX12P2', 'ANXA9', 'IL1RL2', 'CRAMP1L', 'CENPB', 'HOXA9', 'NKD1', 'MAGOH', 'XIRP2', 'NKAIN4', 'ATG4C', 'FBLN7', 'OR2M4', 'CALCOCO2', 'PSAT1', 'MYLK2', 'MPV17L', 'CDK1', 'CLK4', 'OR4M1', 'RASGEF1B', 'NRXN1', 'MAP2K1', 'WBP1', 'FERMT2', 'VPRBP', 'A2M.AS1', 'GDF6', 'PLEKHH1', 'PWWP2A', 'DOK1', 'GJB2', 'JAKMIP1', 'ZNF678', 'SLC35G3', 'MAGEA12', 'OLFM3', 'OR4K15', 'PIGR', 'MVP', 'NR2E3', 'FSTL1', 'ZNF341', 'CD5L', 'CASC8', 'TRNT1', 'RTP2', 'FCER2', 'OR6V1', 'OR52W1', 'LHPP', 'PTK6', 'LRRC25', 'MYO1C', 'SNHG5', 'RBM15B', 'CCDC185', 'SNORD113.6', 'PFKFB4', 'RPP25L', 'CHI3L2', 'UCN2', 'DEFB114', 'TEKT4', 'BMP6', 'MRPL52', 'ELOVL1', 'TTC7B', 'SACM1L', 'DMRT1', 'ALG9', 'SNORD6', 'SLC30A8', 'SOX18', 'EVA1B', 'PLK5', 'SMIM20', 'ZNF778', 'UBE2M', 'METTL21B', 'ANP32AP1', 'SRFBP1', 'RAB38', 'CTNNA1', 'ARMC1', 'PNLDC1', 'LRP2', 'FJX1', 'NME1', 'GCSAML.AS1', 'NDUFA7', 'TEAD3', 'PRICKLE4', 'ARID2', 'TMPRSS13', 'H2BFWT', 'FYB', 'C16ORF91', 'FAM106CP', 'RSPH14', 'FRMD1', 'TMPRSS11D', 'KCNF1', 'SNORD79', 'BST2', 'FUT2', 'PNPLA1', 'ACBD7', 'LINC00893', 'FAM92A1P2', 'TMEFF1', 'LINC00592', 'AARS2', 'MAGEB3', 'SULF2', 'OPN3', 'FAM95B1', 'GTPBP8', 'ACOT13', 'ITGAX', 'TMEM170B', 'SLC39A3', 'FAM195A', 'ITPR2', 'UPP1', 'HSPB11', 'LOC441666', 'USP48', 'GPHN', 'HGFAC', 'CCDC73', 'RHOA', 'USP42', 'TMEM217', 'NAGLU', 'DNAJC25.GNG10', 'L2HGDH', 'PGGT1B', 'BDH1', 'CHAF1A', 'ZNF382', 'STX17', 'FRMD6', 'AFAP1.AS1', 'LDLRAD3', 'SMARCA5', 'MPHOSPH9', 'AIP', 'RGS16', 'SLC11A1', 'MYH10', 'ZYX', 'PARP15', 'DENR', 'CSNK2A3', 'PNISR', 'DOK2', 'LINC01547', 'AADACL3', 'SLC35A1', 'CHAC2', 'ZNF334', 'RDH5', 'TIMD4', 'SIPA1L3', 'SH3BP2', 'THOC5', 'CCL18', 'TXNDC9', 'SLC7A5P1', 'SLC1A6', 'SLC30A7', 'GNAI2', 'ATP6V0D2', 'PPAPDC1B', 'ZNHIT2', 'C21ORF91', 'SLC24A5', 'PEX12', 'AOX1', 'TNNT2', 'SNX17', 'MEA1', 'LGSN', 'FAM47E', 'STOML2', 'RHBDD2', 'APOA2', 'LBR', 'MTRF1L', 'KISS1R', 'SFXN2', 'PRPF4', 'PLEKHD1', 'LRRC45', 'DKK2', 'SLC2A4', 'FAM204A', 'CFHR4', 'TFPT', 'RGPD8', 'DACT2', 'LIN7B', 'OR4N2', 'RPL11', 'NEK4', 'HEATR5A', 'BTF3L4', 'LDOC1', 'LOC388242', 'ACAN', 'MYH3', 'DCDC2', 'TROVE2', 'CRYBA2', 'DGAT2', 'ASIC4', 'CDK19', 'C3ORF84', 'SULT1C3', 'COX7B2', 'IL11', 'GIGYF1', 'EDEM2', 'NCAM1', 'CORO7', 'C17ORF97', 'CNNM4', 'KATNB1', 'NAA20', 'SLC39A11', 'TTC29', 'OR2F2', 'RNF219', 'ZNF653', 'OR2A9P', 'IL13', 'C4ORF50', 'CNTROB', 'PROSER3', 'DSTN', 'TTC39B', 'PAX7', 'AATBC', 'ERCC1', 'TYK2', 'MFRP', 'OR1N1', 'CXORF36', 'PBXIP1', 'PHYHIP', 'SLC15A2', 'HCG18', 'ZNF813', 'ITGB7', 'IL1RAPL2', 'CPTP', 'NAT16', 'LSM3', 'RPL3L', 'SOX3', 'RAB22A', 'MSGN1', 'ENG', 'IPW', 'FMO1', 'FBXL22', 'TNFAIP8L2', 'NLRP1', 'TCL1A', 'DPP9', 'LRFN1', 'DEGS1', 'FIGF', 'TMPRSS11B', 'SPDYE5', 'CBX4', 'IHH', 'ARCN1', 'RNF141', 'DACT3', 'CNGB3', 'API5', 'AJUBA', 'ZNF626', 'DNASE1L3', 'SLC25A18', 'FSCB', 'ASB13', 'GOLGA2P6', 'PDIA5', 'SLC2A13', 'SPATA45', 'REPS2', 'BCL11A', 'EPHA5', 'PSG6', 'CXORF40A', 'PRDM12', 'XKR4', 'SNRPF', 'SLC6A17', 'UPRT', 'METAP1D', 'CCKAR', 'DZIP1L', 'PCDHB5', 'HPCAL4', 'FREM1', 'TSPYL4', 'HSPB7', 'PITRM1', 'NUDT18', 'CLEC2D', 'ACACA', 'ZNF213', 'SNORD19B', 'C1GALT1', 'SFR1', 'DHX37', 'EWSR1', 'PTGES2.AS1', 'RPE', 'TRIM28', 'MAP6', 'GDPD5', 'TRIM37', 'EFR3B', 'SCLT1', 'ACTBL2', 'PCBD2', 'C4ORF22', 'TLR8', 'PAX4', 'PRKD3', 'PTP4A2', 'ZNF611', 'C1ORF100', 'PROS1', 'WISP2', 'PRRC2C', 'FBXO44', 'MRPL46', 'NME1.NME2', 'ELL3', 'STRAP', 'AKR7A3', 'NBPF9', 'TBC1D5', 'NPS', 'CD40', 'TNFRSF14', 'CHD4', 'NT5DC3', 'P2RY12', 'CDK17', 'ST3GAL1', 'ARHGEF19', 'DPH3P1', 'GOLGA2P7', 'NBPF22P', 'AADAT', 'GDE1', 'RAB3C', 'UBQLNL', 'TAS2R19', 'PPP2R1B', 'CADM3', 'MOSPD1', 'SIX1', 'LCMT1', 'INTS4P2', 'PDE1B', 'SMPDL3B', 'PDZRN3', 'FBXO48', 'RPUSD2', 'MAP4', 'SLX4', 'LIN28B', 'PCDHB2', 'MAGEB2', 'SLCO6A1', 'FOXC2', 'ZDHHC21', 'ZCCHC12', 'OR2A2', 'TRIM35', 'PARK2', 'DPH1', 'OR5W2', 'PRAMEF10', 'ESPNL', 'HIST2H2BF', 'EDEM3', 'TPPP3', 'PLA2G2F', 'COL6A4P2', 'ETAA1', 'F3', 'ZNF677', 'TRIM17', 'ABCF1', 'SVIP', 'RAB9B', 'POLR1B', 'TIMM9', 'TEX14', 'APOA1', 'C17ORF75', 'MCM7', 'ECI2', 'TRAF3IP2', 'GJA9', 'OSTN', 'FRMD4B', 'R3HDML', 'EEF1E1', 'OR52B6', 'FAM162B', 'RBM34', 'MMD2', 'HEATR4', 'FOXA2', 'KRTAP5.4', 'ZBTB22', 'SERTAD4', 'TBP', 'JHDM1D.AS1', 'SLAIN2', 'SRSF2', 'PPP6R3', 'PRMT2', 'TMEM155', 'AGAP11', 'SMAD9', 'DKFZP434J0226', 'RAX', 'FAM160B2', 'INSL3', 'GPR173', 'CRBN', 'SFMBT1', 'MCPH1', 'TPM3', 'MMP13', 'C11ORF96', 'OR51G1', 'OR13C4', 'ATF7IP', 'HIST2H2BA', 'C16ORF82', 'HMG20B', 'SPA17', 'OTUD6B', 'OR8G2', 'PSKH1', 'UNC119', 'RAB11FIP5', 'KLF3.AS1', 'CHMP1B', 'RAB8A', 'SVIL', 'ART5', 'HILS1', 'SMAD5.AS1', 'DGKQ', 'OR5B12', 'RSRP1', 'STRC', 'GTF2H4', 'ASF1B', 'LIPM', 'PHKB', 'MGC2889', 'LMX1A', 'INTS7', 'IMMT', 'DLD', 'LANCL2', 'C11ORF52', 'C1ORF68', 'TM2D3', 'RHPN2', 'ADAT3', 'PIK3C2B', 'OPN1SW', 'C7ORF72', 'BASP1', 'ZNF184', 'BTN2A1', 'ARF4', 'ZNF667', 'PAIP1', 'SDR42E1', 'CCDC103', 'MCTP2', 'IFT57', 'TTLL2', 'FAM200A', 'FBXL14', 'DDHD2', 'RAP1GAP2', 'RREB1', 'PCDHB8', 'PDRG1', 'USP53', 'DUSP21', 'VRK3', 'FAM136A', 'CSK', 'LBP', 'AKR1D1', 'ARL6', 'SNORD116.29', 'FTLP10', 'MRPL38', 'C1ORF61', 'TXLNGY', 'ORC1', 'PRSS30P', 'SLC8B1', 'METTL7A', 'ZC3H12D', 'SNORA55', 'SPNS1', 'CYP4F22', 'LPCAT4', 'C20ORF27', 'PNO1', 'RNF182', 'FAM217A', 'NUP37', 'XPC', 'RHOH', 'DPYSL5', 'URB1.AS1', 'TMEM154', 'C6ORF15', 'EVA1A', 'SRPR', 'TIMM13', 'CLEC4M', 'OR51V1', 'HNMT', 'LINC00160', 'TPD52', 'OR5M8', 'TBL2', 'PTGDR', 'EMILIN2', 'CCDC54', 'ZNF426', 'PHF5A', 'C5ORF64', 'DPRXP4', 'FLRT1', 'ANKMY2', 'TPTE2P3', 'SNORA70C', 'DNAJC13', 'LCE1C', 'APOBEC2', 'PCDH7', 'COMP', 'ADIG', 'DENND1C', 'LINC01565', 'MINPP1', 'CDKN2B', 'IDNK', 'DTNA', 'SLITRK1', 'PRKRIR', 'MED1', 'EVI5', 'GLP2R', 'C2CD2L', 'F2RL1', 'GSTZ1', 'GPR82', 'SLIT3', 'STK26', 'ATAD5', 'LAMA5', 'OR2T11', 'KIAA1671', 'ST13', 'COX6A2', 'ZNF41', 'GPC4', 'GMPPB', 'METAP2', 'PCYT2', 'SLAMF7', 'CHRNA7', 'POC1A', 'OR2C1', 'GFAP', 'RASA4', 'ASPHD2', 'FIGLA', 'LACC1', 'SUPT7L', 'PTAR1', 'MIXL1', 'FDXR', 'C7ORF73', 'SIGMAR1', 'ATPIF1', 'KIZ', 'OR51M1', 'CCDC102B', 'PPP2R3A', 'SH2D1A', 'RPGR', 'CENPP', 'SLC52A1', 'OR6T1', 'FHL5', 'DEFB135', 'SLC35E3', 'KRT6C', 'MYO5C', 'RBMY1F', 'IRF2BP1', 'PCYOX1', 'C2ORF57', 'SEL1L', 'BAZ1A', 'ADCY8', 'MEPCE', 'PRR14', 'SMAD3', 'HIGD1B', 'RANGRF', 'ZNF511', 'DTNBP1', 'NFKB2', 'MED29', 'SLC6A15', 'BRICD5', 'SLC17A2', 'GSDMD', 'VSX1', 'MMP23B', 'GPIHBP1', 'PLBD2', 'ZNF226', 'CTAGE5', 'CISD2', 'PGLYRP3', 'ACTRT3', 'CAPN5', 'KCNK2', 'TNFRSF4', 'HDX', 'CCDC78', 'MRPS23', 'ZAK', 'TNS2', 'TPPP', 'AMD1', 'CXORF56', 'EIF4E3', 'ANGPTL6', 'DUSP6', 'IL18RAP', 'SERPINB8', 'PLBD1', 'BLOC1S3', 'PDE12', 'C10ORF10', 'ANKRD22', 'TMEM156', 'SPRR3', 'CAPN7', 'PANK4', 'GDAP1', 'NCBP1', 'CCL7', 'CAMTA1', 'DUSP15', 'TFAP2B', 'APOPT1', 'NFKBID', 'CEP68', 'CARKD', 'SLC35F3', 'SCN1A', 'SEC61G', 'ETFA', 'PRAMEF16', 'UGT2B15', 'HAUS7', 'GABRB2', 'IRGQ', 'C2CD2', 'CD300E', 'GUSBP5', 'LOC284379', 'TSPO', 'PHOX2B', 'ZNF781', 'METTL21A', 'TRPV5', 'DTYMK', 'LRRC56', 'NMS', 'HOXB5', 'MRPL44', 'SERPINE3', 'RPPH1', 'SNORD25', 'KMT2D', 'SLC16A5', 'SNORD115.7', 'ZNF416', 'SNORA81', 'ATP5D', 'TRAPPC2', 'ZNF578', 'MAPKAPK5.AS1', 'UGT3A2', 'OS9', 'TRPS1', 'ZCCHC7', 'SOX2', 'NCF2', 'BEST2', 'PRG3', 'GPR65', 'ZP2', 'TM6SF1', 'SULT1A1', 'POLR2G', 'OSBPL9', 'DRC7', 'TAS2R46', 'LRRC7', 'PHKA1', 'ARHGAP30', 'HMGN3', 'TIFAB', 'TTF2', 'NFYC.AS1', 'CTBP2', 'RDH11', 'APBA1', 'FZD5', 'PTCD1', 'OR51T1', 'KCNS2', 'KRT82', 'OR1J1', 'PIWIL1', 'PCBP3', 'ABR', 'POLA2', 'PRX', 'EGR4', 'DLEC1', 'MANBA', 'PSEN2', 'CSMD3', 'NEUROD2', 'ZNF777', 'ANO9', 'SLC25A51P1', 'SNORD4A', 'SERPINB4', 'LPPR3', 'MAGEC1', 'TMEM231', 'SLC16A11', 'COPS3', 'NDST2', 'RGMB', 'RAB15', 'LARS', 'THYN1', 'TRIML2', 'THAP10', 'SIRT5', 'IL15RA', 'KIF18A', 'ZNF33A', 'EEF2', 'MAGEL2', 'ZSCAN25', 'KANSL3', 'HGF', 'RTN4', 'FEZF2', 'YWHAQ', 'PSTK', 'HOXB6', 'ZNF322', 'FOXRED2', 'PMS2P4', 'KDM4D', 'ENO2', 'OR4D5', 'ABCA11P', 'SEPT7P2', 'TOR1B', 'UNC5A', 'TMEM119', 'TREML5P', 'FIS1', 'SPINK9', 'CD164L2', 'SLC13A2', 'OR2C3', 'HHATL', 'C8ORF33', 'TMOD2', 'MCOLN1', 'NUGGC', 'ZNHIT6', 'SLC26A8', 'PSMC3', 'TSPAN5', 'SERINC3', 'ALG14', 'SLFNL1', 'MCMBP', 'OR2AK2', 'NAP1L5', 'BIVM', 'LRRC69', 'ZBBX', 'ANO2', 'TCIRG1', 'APBB1', 'CRLF1', 'DSCR3', 'LRRC52', 'ZNF19', 'FOXC1', 'FAM3B', 'MDM2', 'RAC3', 'EFCAB6', 'ATP1B1', 'STAB2', 'SNORD116.23', 'MIIP', 'PAX1', 'ZC3H8', 'TOR3A', 'MVK', 'C8ORF34', 'FMO4', 'RNF39', 'SMUG1', 'FAM138F', 'OR7C2', 'MMP17', 'SDC3', 'IFNK', 'ERICH5', 'CXADRP3', 'C12ORF77', 'PSAP', 'ANXA3', 'SUSD1', 'OCRL', 'P2RY6', 'LCN10', 'IL1RAPL1', 'WIPI2', 'TJAP1', 'TMEM9', 'FAM196B', 'RFFL', 'MORF4L2', 'LRP2BP', 'ITGA8', 'KATNBL1', 'ZDHHC14', 'NOXA1', 'FAM209A', 'C9ORF171', 'CBLN3', 'TPTE', 'SCAND2P', 'LINC00341', 'ASB16', 'MFSD7', 'KLK1', 'RAPGEF2', 'ATRNL1', 'ZDHHC22', 'ICOSLG', 'SATB2.AS1', 'REV1', 'TNPO1', 'ATL2', 'LINC01554', 'UQCRHL', 'SNORA8', 'PAIP2', 'EPHA4', 'ARFGAP1', 'FEN1', 'ALOX5AP', 'CCDC82', 'MOGAT3', 'SIKE1', 'ZNF571', 'ANGPTL3', 'KLHL12', 'C14ORF166', 'PER1', 'CABP7', 'SHB', 'RET', 'MYO1E', 'MTHFD1', 'RB1CC1', 'NLE1', 'CEACAM21', 'KRT17P5', 'FSD1', 'RAPGEFL1', 'TSG101', 'WDR81', 'LRRC61', 'ARL6IP5', 'C5ORF15', 'DUT', 'ERRFI1', 'LINC00661', 'CNOT11', 'POGK', 'SLC6A11', 'MAP1LC3B', 'TRIM49D2', 'ARL14', 'OR2AG2', 'C2CD4C', 'SMARCD3', 'FAM109B', 'G6PC3', 'MSMP', 'OR52E8', 'LOC344967', 'MIEF2', 'CCDC177', 'CTR9', 'FOXJ2', 'SNORA66', 'DNAJC30', 'PSENEN', 'VRK2', 'LYPLAL1', 'GPR17', 'SDK1', 'HSPA1B', 'DEFB110', 'TSG1', 'SUB1', 'SIM2', 'DBX2', 'PRKCA', 'RAB42', 'AGGF1', 'ZFP62', 'RPL23', 'SKAP1', 'FOSL2', 'CYP4V2', 'ZMIZ1.AS1', 'ROGDI', 'LOC388955', 'MGC57346', 'C9ORF50', 'SCARNA9L', 'ZNF430', 'MTMR3', 'TBC1D22B', 'HYAL3', 'OR52A5', 'HLCS', 'ZNF222', 'SLC22A1', 'CHD8', 'NFE2L3P2', 'MAX', 'AVPR1A', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.9017803338274701 Spearman Correlation: 0.8974116957409007 Coefficient of Determination: 0.8126324925338568 RMSE: 0.30794799459299355 NRMSE: 0.07437638744879567 MAPE: 147.6121646290154 Pearson Correlation: -0.06430122745159769 Spearman Correlation: 0.2071300229805261 Coefficient of Determination: -4.160114970760833e+22 RMSE: 163671459890.59113 NRMSE: 34410785444.99855 MAPE: 126769693163708.08 Predictor: ElasticNet Pearson Correlation: 0.633041004167163 Spearman Correlation: 0.6244927757503728 Coefficient of Determination: 0.36660709815559733 RMSE: 0.5661960517462598 NRMSE: 0.13674911886442367 MAPE: 344.53677144609895 Pearson Correlation: 0.2481592626396199 Spearman Correlation: 0.27615556303694566 Coefficient of Determination: -0.0059336762127815135 RMSE: 0.8048314956137071 NRMSE: 0.16921022109446368 MAPE: 450.0690794614865 Predictor: RandomForests Pearson Correlation: 0.4300175225194389 Spearman Correlation: 0.5018278249804586 Coefficient of Determination: 0.17255379859395148 RMSE: 0.6471428002230158 NRMSE: 0.15629958463506324 MAPE: 524.671716710153 Pearson Correlation: 0.1859336486937113 Spearman Correlation: 0.1565081858876046 Coefficient of Determination: -0.08598071042504496 RMSE: 0.8362407852951601 NRMSE: 0.1758138056713397 MAPE: 723.2651478964001 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['MOS', 'TTTY5', 'FAM111B', 'ASB1', 'CST13P', 'PLA2G4D', 'KIR2DL4', 'MSANTD2', 'C2ORF69', 'MED21', 'POLR1C', 'TCAF1', 'PHF14', 'GPHN', 'CCDC97', 'BLOC1S3', 'ZNF304', 'USP40', 'TACC1', 'SLAIN2', 'FAM78A', 'PTP4A3', 'SPIRE1', 'MVB12A', 'KMT2B', 'FXYD7', 'TGFBI', 'PDE6D', 'WFDC10B', 'ZUFSP', 'TTF2', 'AMZ2P1', 'ANLN', 'AFF1', 'ZYG11B', 'TBCEL', 'LOC645752', 'LINC01566', 'HS3ST1', 'DNAJC1', 'PROKR2', 'WFDC5', 'GOLPH3L', 'VENTXP7', 'OGT', 'SKA3', 'OGFOD3', 'CAGE1', 'PRSS16', 'IRF9', 'LINC00606', 'AFAP1.AS1', 'FRAS1', 'PLEKHN1', 'UBE2E2', 'ARL15', 'LRRC71', 'ZNF398', 'GPR32', 'MFF', 'LTK', 'FTH1P3', 'FN3K', 'SLC34A1', 'TAS2R60', 'CFTR', 'HERC5', 'SH3BP5L', 'ENTPD7', 'MPLKIP', 'FBXL8', 'FAM45A', 'MAPT.IT1', 'VWA1', 'GPR19', 'STK32C', 'NR5A2', 'SULT1E1', 'PMM1', 'CCDC64', 'MAPK10', 'MBD3', 'CTXN2', 'PDZD4', 'CDC123', 'SPATA32', 'GABRB1', 'SLC7A13', 'ARHGEF11', 'LGALS13', 'FGF12', 'P4HTM', 'ZGRF1', 'DKK1', 'SNORD53', 'UQCC2', 'ANKRD29', 'ARPC2', 'MT1IP', 'DHRS2', 'LPP', 'ADIPOR2', 'SLC2A8', 'LOC115110', 'POF1B', 'ZNF184', 'SLC23A3', 'PRSS30P', 'CCDC106', 'LIN9', 'VRK2', 'HMG20A', 'VAPB', 'DNAJC2', 'GTPBP6', 'PAGE2B', 'TOP3B', 'FUT2', 'GRXCR2', 'SNORA46', 'MYL6B', 'PINK1', 'MAGEA12', 'FAM21C', 'KMT2A', 'GPR183', 'NBL1', 'PCDHAC2', 'OR2T2', 'POMZP3', 'CXORF57', 'CLN6', 'NLRX1', 'NFKBIZ', 'NOMO3', 'CACNG6', 'TRIM74', 'SIDT2', 'UBL3', 'HRH1', 'MSTN', 'NEK7', 'ADCY7', 'CDH15', 'CRELD1', 'SMIM12', 'FAM208B', 'UNC93A', 'MYBPHL', 'TMEM130', 'OSBPL11', 'RAB11FIP2', 'PPIE', 'NOP58', 'CYSLTR2', 'CPA2', 'GPAA1', 'KIAA1257', 'KLK3', 'ACOX2', 'OR4C45', 'PRAP1', 'PAOX', 'STK10', 'CT45A2', 'HMCN1', 'LENG8', 'ADD2', 'NCOR2', 'DHX15', 'OR2F2', 'ACOT7', 'REEP2', 'XPO5', 'EVI2A', 'PKIB', 'LOC441666', 'MAP1A', 'ZNF397', 'C2ORF15', 'COQ4', 'VAX2', 'ANXA10', 'TUBB8', 'C8ORF82', 'CHRAC1', 'POM121L10P', 'C2CD4C', 'RNASEH2A', 'IFNA7', 'DDX1', 'SAPCD2', 'PAX5', 'CSDC2', 'SUPT4H1', 'KCNH2', 'CYP4F30P', 'ADAMTS16', 'PTK7', 'RALGPS2', 'GATC', 'C20ORF202', 'TATDN2', 'TIAM1', 'MPZ', 'LINC00899', 'HRASLS2', 'FAM83B', 'LGALS8', 'LINC00482', 'SCHIP1', 'TDGF1', 'E2F2', 'LAP3', 'UBE2Q2', 'VANGL2', 'IFNK', 'FAM167A.AS1', 'C2CD2L', 'COMTD1', 'REC114', 'PAQR4', 'DCAF15', 'KRTAP19.7', 'TMED2', 'ZNF524', 'ANK2', 'TMEM168', 'CNTNAP2', 'CWC25', 'SBDSP1', 'GJA5', 'PGA3', 'IMPDH2', 'KIAA1467', 'MPZL1', 'NLRP12', 'PIDD1', 'CATSPERG', 'NDUFA3', 'ZNF688', 'INSM2', 'ABCA8', 'CHCHD2', 'MARCKS', 'CACTIN', 'ZMAT1', 'MEPCE', 'IL13RA1', 'SNORD15A', 'SRFBP1', 'EIF1AD', 'RANBP6', 'TRIM17', 'METTL5', 'UG0898H09', 'ACTR10', 'CXADRP3', 'ZNF19', 'RBMXL3', 'PKD1L3', 'ZAR1L', 'OR5M3', 'XPR1', 'NAP1L5', 'SNORD62A', 'PROP1', 'SLC35B3', 'NEO1', 'OR5AC2', 'VPS41', 'IL1RAP', 'ELP4', 'SERINC4', 'PCDHGB4', 'CKB', 'FBXO2', 'TERF2', 'WDR31', 'SGK223', 'DCAF12L2', 'LY86', 'ERICH1', 'ERICH4', 'BRWD3', 'HECTD2', 'ZP3', 'ABCA1', 'B2M', 'PIK3C2A', 'ADRA1D', 'LCE1C', 'SGCE', 'PCNP', 'TRAF2', 'AP2M1', 'RAB11FIP5', 'MYO1B', 'METTL21C', 'ELOVL3', 'RBM33', 'GPATCH2L', 'NKX2.1', 'MYRF', 'RMI2', 'NAB2', 'ENTPD2', 'LRRN1', 'GKN1', 'ADGRD1', 'TNRC6B', 'PRO0611', 'NRXN2', 'ZNF614', 'PHLDB3', 'C2ORF78', 'PRR23C', 'SAXO1', 'ASAP1.IT1', 'C11ORF70', 'LAMP3', 'FAM9B', 'SLC17A9', 'NCR2', 'RGL2', 'SNORD73A', 'ATP4B', 'ATP2A3', 'NAT10', 'OSBPL10', 'SEC11A', 'MRVI1', 'HCFC1', 'SHARPIN', 'PIEZO2', 'TMEM244', 'SFTA3', 'KLHL28', 'ITGAE', 'SPPL2B', 'OR1C1', 'PTPRE', 'CDH10', 'SNCAIP', 'HIC1', 'PLG', 'SH2D3A', 'CASP4', 'SON', 'WRB', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.649315892957389 Spearman Correlation: 0.5299859991559228 Coefficient of Determination: 0.3513323739285984 RMSE: 0.4065689396098864 NRMSE: 0.09811736844122074 MAPE: 74.02811820005901 Pearson Correlation: 0.24142979350323038 Spearman Correlation: 0.32873112470786153 Coefficient of Determination: -1.737135585127185e+23 RMSE: 188427321363.14996 NRMSE: 76890280487.69688 MAPE: 2998598403619.4224 Predictor: ElasticNet Pearson Correlation: 0.6224809630114106 Spearman Correlation: 0.5434801982893254 Coefficient of Determination: 0.3689592150194805 RMSE: 0.40100685789634477 NRMSE: 0.0967750700814115 MAPE: 79.12505736263094 Pearson Correlation: 0.5068791166302463 Spearman Correlation: 0.3235875759049365 Coefficient of Determination: 0.24907962828359143 RMSE: 0.39176348929892096 NRMSE: 0.1598643145755819 MAPE: 102.58989294867504 Predictor: RandomForests Pearson Correlation: 0.5749288200159526 Spearman Correlation: 0.48603019355732896 Coefficient of Determination: 0.2898933253956032 RMSE: 0.4253876553924374 NRMSE: 0.10265889311302397 MAPE: 82.21143211157678 Pearson Correlation: 0.46556092056879633 Spearman Correlation: 0.32895858214810936 Coefficient of Determination: 0.19275473770995544 RMSE: 0.4061905060122265 NRMSE: 0.16575145107819578 MAPE: 126.81061647676144 Protein: CCND1 x_train_column_count: 859 x_train columns: ['SNORD88A', 'HSD11B1', 'SDC4P', 'IFNA17', 'LINC00461', 'HCN3', 'GORAB', 'RUFY3', 'HLA.H', 'CLK4', 'GFI1', 'ZNF85', 'KCNK4', 'TNPO2', 'ARHGDIA', 'ZBTB21', 'OR4F15', 'RYR2', 'KHDC1', 'ZSWIM5', 'RIPK3', 'IFT46', 'FAM212A', 'ASZ1', 'LRRC28', 'ZC2HC1C', 'RNF185', 'C1ORF177', 'SMIM4', 'FKBP3', 'POLR3B', 'MACF1', 'LOC400736', 'NRSN2', 'ZNF182', 'PCID2', 'KDSR', 'DNAJC12', 'USP20', 'CENPL', 'BNIP3', 'WWP1', 'NMUR1', 'SLC35A4', 'GRXCR2', 'COL13A1', 'ADI1', 'TTYH1', 'CEACAM22P', 'ZNF136', 'C5ORF56', 'MRPL52', 'ZNF578', 'PDAP1', 'IRAK2', 'SQLE', 'THEM4', 'UTP15', 'RPS28', 'NSUN6', 'SAA4', 'CALN1', 'ASB6', 'TNN', 'FAM95B1', 'PHLDB2', 'KCNH2', 'PCYOX1', 'ATXN1', 'C2ORF27A', 'UMODL1', 'IZUMO1', 'ANKRD30A', 'OGFOD3', 'SERPINB7', 'DDX23', 'TRMT10C', 'ARHGAP19', 'SLC28A3', 'ANKRD19P', 'GINS4', 'EXTL1', 'LRRC19', 'CCDC53', 'PARP4', 'BSND', 'PSMB5', 'POPDC2', 'TMEM109', 'PFN1P2', 'MRM1', 'GRAMD4', 'ADARB1', 'SPHKAP', 'BICD1', 'MEOX1', 'PWP1', 'ERGIC2', 'LCMT2', 'SLCO1B3', 'RNF17', 'N4BP2L2.IT2', 'PANX1', 'ACTA2', 'PLGLB2', 'TMEM219', 'CEP162', 'UBQLN4', 'LUC7L3', 'LINC00239', 'SHOX', 'UBAP2L', 'B9D2', 'RTN4IP1', 'SNTB1', 'SNORD55', 'TGM2', 'GPER1', 'NPFFR1', 'HYLS1', 'SLC51B', 'F12', 'ATXN3', 'CSRP2', 'NDUFAF3', 'SLC5A7', 'AMHR2', 'GFRA4', 'AOC4P', 'ATCAY', 'KRTAP19.3', 'PRX', 'WDSUB1', 'ISL2', 'JTB', 'DDTL', 'PM20D2', 'SIRPB2', 'SEMA3C', 'ESYT1', 'ZNF793', 'GFRAL', 'MAP3K10', 'EVX2', 'SLC38A10', 'COG1', 'FRMPD2B', 'POLR2A', 'ZNF528', 'ARL10', 'SNURF', 'TMEM127', 'FAM192A', 'HIST2H4A', 'SUGP1', 'ZIC1', 'RALB', 'GPA33', 'PRR26', 'LTBP4', 'LINC01001', 'LINC00887', 'DPM2', 'ZNF556', 'SPRY3', 'SLAMF1', 'IFI30', 'MGEA5', 'RAD51AP1', 'EBI3', 'IQSEC3', 'SLC38A4', 'SCARNA9', 'ANKS1A', 'TAS2R1', 'EFCAB8', 'CDS2', 'XAB2', 'TUBB2A', 'RNF214', 'XIRP1', 'TEX14', 'DISP2', 'FAM117A', 'NIPAL1', 'EPX', 'MEF2BNB.MEF2B', 'PTDSS1', 'SLC5A4', 'TTLL6', 'DKFZP434H168', 'CCNE1', 'HBA2', 'A2M', 'C19ORF52', 'HPRT1', 'CD209', 'S100A13', 'TGIF2LY', 'GAS2L2', 'TTC13', 'URB1.AS1', 'TAGLN2', 'RASL12', 'CFAP52', 'ZMYND8', 'PLEKHA5', 'ARHGAP26', 'LINC00152', 'CRYGD', 'STK24', 'TMEM229B', 'NLGN4X', 'LOH12CR1', 'CAND1', 'PPP1CC', 'DNAAF3', 'DNAJC3', 'PTRF', 'C15ORF56', 'CYP46A1', 'RGS20', 'STK26', 'TOMM40', 'MAPKBP1', 'BMF', 'INTS4P2', 'FRMPD1', 'TBCCD1', 'ZNF33B', 'PSMA7', 'TRIM25', 'PPWD1', 'SNORD116.1', 'SOCS7', 'SNAR.H', 'VPS13C', 'KIF13A', 'KIN', 'WAS', 'ITPRIP', 'MCUR1', 'NAGLU', 'GPAA1', 'LSM5', 'H2BFWT', 'FOXS1', 'KRTAP1.1', 'USP39', 'TTC5', 'IMP4', 'RNF31', 'IL27', 'RBL1', 'C9ORF43', 'ZIC3', 'RBM15B', 'QSOX2', 'CD24', 'SCN5A', 'RCN2', 'SPATA7', 'SEC24A', 'TAPT1', 'EMILIN2', 'SNORD116.11', 'SNORD116.27', 'FBXO31', 'ACVR1C', 'TMEM184B', 'ASH1L', 'SLC17A7', 'GDE1', 'CUL7', 'IFNL1', 'VN1R1', 'ABT1', 'IGLL1', 'DDX11', 'ACBD5', 'TMEM60', 'METTL7B', 'TIMM10', 'BRPF1', 'MMP15', 'CNR2', 'MAP7D2', 'SNRNP40', 'ARMC8', 'IFNA8', 'PLIN5', 'PCDHGB5', 'GAD1', 'JADE2', 'PRDM2', 'TRMT2B', 'FAM13C', 'CANX', 'MYLPF', 'FAM150A', 'STX16', 'OR52E2', 'CCDC54', 'MGMT', 'CYLC1', 'GJC3', 'TSC2', 'POU1F1', 'OR4D5', 'CYHR1', 'SLC9A4', 'DBIL5P', 'FBLN7', 'NTN4', 'LDHAL6B', 'CCDC40', 'CCL2', 'SNORD77', 'INE1', 'ATP1A1.AS1', 'CP', 'NUAK1', 'GPR161', 'F2R', 'UBXN6', 'GYPA', 'IFNA16', 'SMYD1', 'SNORD126', 'SRBD1', 'TFCP2L1', 'ALG11', 'MFSD6L', 'AK8', 'VSIG10L', 'SCARNA15', 'CRYGS', 'IGSF9B', 'CCNH', 'EPB41L4A.AS1', 'LINC00303', 'ABCB6', 'CEP104', 'TMEM199', 'TMEM141', 'CDH20', 'RXRG', 'USP6NL', 'LILRB2', 'WDR90', 'GPRASP1', 'NUP107', 'TOLLIP', 'CTDSP2', 'SPRR2F', 'CGB2', 'CPN1', 'SF3B5', 'DOC2A', 'ATP7B', 'RBM4B', 'XRN2', 'RPA3', 'LPPR1', 'CWH43', 'NAA40', 'MMS22L', 'LRRC6', 'PWP2', 'TMUB2', 'OR9Q1', 'RELB', 'KIF14', 'ZSCAN18', 'UVSSA', 'SPINT3', 'CDH11', 'SPAG5', 'H1FX', 'RPN2', 'PIK3R2', 'COA4', 'CHM', 'KLF1', 'RAMP2.AS1', 'ITFG1', 'CLSPN', 'CHODL', 'NACAD', 'CDS1', 'TLR2', 'DANCR', 'TTC14', 'MIXL1', 'C3ORF35', 'ZSCAN12', 'WIPF1', 'KIAA1804', 'KCNQ1OT1', 'SNAP25', 'LLGL2', 'TMEM121', 'SORBS3', 'SUPT20H', 'C12ORF75', 'SIX1', 'SNORA81', 'ADAD1', 'SLC11A2', 'SYTL1', 'SFTPB', 'SCNN1A', 'MRPS22', 'GNB2', 'RAB37', 'KLHL15', 'SAMD8', 'CDH22', 'GTPBP2', 'DDX12P', 'AMZ1', 'CECR5', 'IPO4', 'DZIP1L', 'CRISPLD1', 'ALDH3B2', 'CATSPER1', 'ZNF287', 'LRCH3', 'C17ORF102', 'PDE4DIP', 'DAP', 'SNORD116.12', 'ARSD', 'CITED1', 'SORBS1', 'PROC', 'PRRG4', 'DAB2', 'HNRNPA1P33', 'GOLGA6L6', 'KLKP1', 'COL20A1', 'HIST1H3J', 'GP2', 'MRE11A', 'GSTM2', 'SNRNP70', 'AGAP4', 'PABPC1L2B', 'HNF4G', 'ZSCAN31', 'BCL10', 'BPIFB2', 'C7ORF61', 'RADIL', 'PDE6G', 'RFPL3S', 'LINC00634', 'FOXI3', 'SERP2', 'KCNT1', 'NAPRT', 'TMLHE', 'IFIT5', 'GNPNAT1', 'C7', 'NUDCD3', 'CTAGE6', 'PIGQ', 'RPL3L', 'NAALADL1', 'COX17', 'NSA2', 'CCRL2', 'PRSS3P2', 'SNORD71', 'CDC42BPB', 'DNAH5', 'SQRDL', 'SOAT1', 'KLF4', 'PPP1R3A', 'SYNC', 'INTS4P1', 'IL10', 'ABHD3', 'RNF13', 'GAL3ST1', 'FAM201A', 'FBF1', 'NCKAP1L', 'SNORA71A', 'LCN8', 'IGFBP4', 'SNAR.C3', 'LARP6', 'ZNF416', 'RENBP', 'IBSP', 'TMEM179B', 'DIXDC1', 'UNC5B', 'DTX2', 'RPRD1A', 'IFITM5', 'C1ORF123', 'TACC2', 'TXNDC12', 'PSD2', 'STARD5', 'MTOR', 'WBP4', 'ANKS6', 'HYI', 'LOC100128573', 'ZBTB25', 'SIRPG', 'MESTIT1', 'SUPT5H', 'YLPM1', 'NKAPP1', 'TUBE1', 'CCHCR1', 'ANKRD10', 'PAX9', 'HMMR', 'RHOBTB1', 'CLK1', 'LOC284023', 'LINC00597', 'PIGY', 'ARHGAP33', 'EIF4A1', 'KRT80', 'OR4F6', 'HIRIP3', 'DIRAS2', 'MTTP', 'LIPT1', 'ABCC1', 'THOC6', 'TAMM41', 'CDC42SE1', 'RAB1A', 'HOXB7', 'OIP5', 'DGAT2', 'LY6G5C', 'LILRA5', 'PI4KB', 'MMRN1', 'PCDHA13', 'ATF3', 'DYRK2', 'DLEC1', 'PSG11', 'AGAP2', 'RAB3C', 'C8ORF22', 'FNDC5', 'HIST1H3I', 'HPCA', 'OR14J1', 'SNORD4A', 'LSR', 'SDHAF1', 'ZNF177', 'CAPS2', 'SNORD90', 'SPTSSA', 'RSBN1L', 'STOML1', 'CANT1', 'FOS', 'OR8J3', 'PCDH18', 'PAXIP1.AS2', 'OLFM1', 'DOK6', 'CYTH4', 'CTRB2', 'ADGRF1', 'CCDC96', 'LIMD2', 'GNAI2', 'COMMD2', 'NUDT8', 'OR5A1', 'OR6C4', 'OSGIN1', 'PTGR1', 'HOMER2', 'MAGEB10', 'HTR2C', 'HIP1R', 'ANGPTL1', 'TMEM89', 'HCG9', 'GOSR2', 'SLC13A1', 'ZNF804B', 'OSBPL8', 'ERO1LB', 'SLC17A9', 'DPYSL3', 'OR5K4', 'ARID4A', 'PRADC1', 'ADGRD1', 'MS4A10', 'WBP1', 'GDF15', 'GSG1L', 'NUTM2F', 'THEG', 'CROT', 'ANP32A', 'C11ORF86', 'FAM168B', 'BHLHE22', 'VHL', 'NSUN2', 'SNX17', 'RAB33B', 'SLC10A5', 'ELF1', 'ZNF324B', 'TMEM207', 'POLR3A', 'BIN2', 'TFR2', 'VSIG10', 'CAPN6', 'PCDH1', 'UBE2D1', 'OR4K15', 'INSR', 'ASGR2', 'UCN3', 'OR2Y1', 'SNAPC5', 'METTL5', 'TCHP', 'CCDC88A', 'DHODH', 'FAM83F', 'CPD', 'NAA11', 'CXORF65', 'TXLNGY', 'AKNAD1', 'PQLC3', 'FAM183CP', 'ATXN8OS', 'LINC00593', 'GABRA4', 'NPHS1', 'RBBP6', 'KRT40', 'POMC', 'GAR1', 'CEP41', 'GALNT18', 'ORC3', 'CNOT8', 'GBP3', 'SBNO2', 'PMCHL1', 'KRTAP13.4', 'BSG', 'SRP72', 'HCG4B', 'AGO3', 'ZNF44', 'SUN5', 'ADCY8', 'RAB22A', 'NDC1', 'COLEC11', 'SELENBP1', 'SMAD5.AS1', 'ADPRHL1', 'CCNB1', 'KIF22', 'DNASE1L1', 'SNX32', 'THBS2', 'MSN', 'PPFIA3', 'IER5L', 'HNRNPL', 'RARS', 'CFAP126', 'PTP4A3', 'ZNF653', 'CTPS2', 'C21ORF91', 'KRTAP19.1', 'SUMF1', 'SSPO', 'RNY5', 'PPM1G', 'ISY1', 'BCKDHA', 'MDC1', 'SLC11A1', 'DOK7', 'OR5T3', 'RIT2', 'RNF125', 'ARHGEF39', 'C9ORF40', 'LINC00470', 'KRT1', 'CACNG2', 'EN2', 'NPEPPS', 'PALM2.AKAP2', 'TOM1L2', 'MOXD1', 'SNORD114.4', 'CACTIN', 'PACRG', 'TCTE1', 'CYFIP1', 'SPESP1', 'SLC25A42', 'MYL10', 'SH3RF1', 'CLDN25', 'PRR7', 'RBM11', 'TCEAL6', 'LAIR1', 'GAB1', 'VN1R2', 'MAP6', 'SOX30', 'RAB5B', 'SNORD116.24', 'ACADL', 'CHI3L1', 'DBF4B', 'TEN1', 'BMP15', 'BIN1', 'SNORD80', 'LINC00202.1', 'PRPF18', 'KLF7', 'MAPK10', 'VEPH1', 'SNAR.G2', 'VTI1A', 'NTAN1', 'ADRA2B', 'ZNF492', 'WDR35', 'PLAUR', 'ARHGEF5', 'RAET1G', 'PCGF1', 'ATAT1', 'ZNF879', 'PSKH1', 'SNORD38A', 'AP3M1', 'MLXIP', 'INSRR', 'GRM3', 'MGAT4A', 'KHDC1L', 'BDP1', 'LOC646762', 'LRGUK', 'ESRP2', 'GPX6', 'LGALS3BP', 'MKKS', 'APOF', 'GOLT1A', 'KCTD2', 'CEP57', 'TRIM42', 'SLC25A51P1', 'ADAMTS10', 'FAM171A2', 'OR4K1', 'IGFBP6', 'EID2B', 'MBNL1.AS1', 'ATP6V0C', 'PNPLA6', 'LIMK1', 'FBXL15', 'NAGK', 'EPC2', 'RNASE6', 'WDR11', 'EFS', 'DLL1', 'OR2T33', 'PTPRVP', 'BCL7C', 'MYO15A', 'UBFD1', 'CPA1', 'NRP2', 'BPHL', 'C12ORF76', 'C10ORF67', 'PLEKHG1', 'CATSPERB', 'LRFN4', 'IMP3', 'CBLN1', 'P2RY11', 'PRPF38A', 'PRAMEF10', 'RNF4', 'ADAM23', 'TRA2A', 'GREB1', 'DEAF1', 'BNC2', 'BCLAF1', 'ARHGEF40', 'ZBTB40', 'PPBPP1', 'SYNPO2', 'G2E3', 'GPM6A', 'NUPR1L', 'CHD3', 'ERC2.IT1', 'SCARB2', 'ANKEF1', 'RELL2', 'RWDD4', 'FBLN2', 'IKZF3', 'DOCK7', 'HHLA3', 'TRPM7', 'ZNF660', 'CD52', 'TCEAL4', 'TOPORS', 'FZD8', 'PREX2', 'RIMKLA', 'SERTAD1', 'UGT2A3', 'NRXN2', 'SSR3', 'SNHG12', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 0.8003917581882263 Spearman Correlation: 0.7529118419186841 Coefficient of Determination: 0.6339407310909762 RMSE: 0.14539263470480562 NRMSE: 0.09288958402320799 MAPE: 390.9715589079632 Pearson Correlation: 0.03147495146345201 Spearman Correlation: 0.18413538391173512 Coefficient of Determination: -2.1945055295661678e+24 RMSE: 339240217329.1979 NRMSE: 213950692059.28223 MAPE: 22001307661788.61 Predictor: ElasticNet Pearson Correlation: 0.43339480248682805 Spearman Correlation: 0.443066392719132 Coefficient of Determination: 0.13472878617643158 RMSE: 0.22353360925006258 NRMSE: 0.14281290122159349 MAPE: 575.5034889279565 Pearson Correlation: 0.23651002813071928 Spearman Correlation: 0.20403995062282573 Coefficient of Determination: 0.04778100514478234 RMSE: 0.2234639202049273 NRMSE: 0.14093335028060502 MAPE: 526.5149173731602 Predictor: RandomForests Pearson Correlation: 0.46453413229586205 Spearman Correlation: 0.449770650226202 Coefficient of Determination: 0.14520288103527013 RMSE: 0.22217655449741008 NRMSE: 0.14194589546351954 MAPE: 574.7079225232774 Pearson Correlation: 0.11170790911682203 Spearman Correlation: 0.1549921507652806 Coefficient of Determination: 0.008004032769923564 RMSE: 0.2280835407607377 NRMSE: 0.14384683448583357 MAPE: 484.05513092887713 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['PABPC4L', 'OSR1', 'LRRC2', 'SUSD5', 'UBE2V2', 'SMAD1', 'STK32C', 'CYP19A1', 'MYO18B', 'C10ORF25', 'KCNE5', 'DMXL2', 'MS4A3', 'FAM27C', 'CD200', 'C2ORF49', 'ASGR1', 'CCT3', 'ATMIN', 'RECK', 'TRA2A', 'FAM43B', 'CDC42BPA', 'FUOM', 'TNFRSF17', 'CDH15', 'SPTLC1', 'C9ORF40', 'SYNE1', 'ENG', 'RPS25', 'NQO2', 'SYNM', 'OR10A4', 'SNRNP70', 'THRSP', 'FAM186A', 'CDK15', 'TMEM170B', 'SLFN14', 'EPB41L4A.AS2', 'ALOX5AP', 'IFNGR1', 'CCNB1IP1', 'PIEZO2', 'GSTZ1', 'GDNF', 'SRP9', 'ZNF484', 'JMY', 'RNF115', 'AKAP6', 'RHOU', 'ARMC7', 'LPAR6', 'ANGPTL5', 'ACAN', 'AGAP2.AS1', 'PAXIP1', 'NKAIN2', 'MICALCL', 'FLT3LG', 'MCEMP1', 'BPIFB3', 'AKAP3', 'LIPA', 'EPB41L2', 'EPHB3', 'NCOR1', 'SPA17', 'TAF2', 'ZC3H12D', 'ZNF10', 'ATP6V1C2', 'ERC2', 'SPIN2B', 'RASGEF1A', 'GRIK1.AS1', 'DENND1B', 'PPCDC', 'VPS28', 'TCEB3B', 'MAGEB18', 'ACBD5', 'SNORD115.38', 'TXNDC11', 'NDNF', 'DYNLT3', 'SLC39A2', 'ZNF529', 'SNHG5', 'ZC3H12A', 'SLC26A4.AS1', 'ZEB1', 'LBX1', 'P4HA1', 'ATXN10', 'SGSM2', 'HERPUD2', 'ADORA2B', 'MOS', 'KIAA1429', 'DDX53', 'WSB2', 'LDHA', 'ZNF429', 'OTOA', 'VPS26B', 'GGACT', 'CCDC64', 'DPCD', 'NPS', 'OR6C2', 'LPA', 'TOX2', 'VDAC2', 'FAM27B', 'PPIP5K2', 'CNOT7', 'LGALS3BP', 'CLCA4', 'TTYH3', 'CMA1', 'KLHL12', 'TP53I11', 'TAS2R39', 'BSND', 'TOM1', 'PON2', 'KLRC1', 'DKFZP434A062', 'MSX2P1', 'MFI2', 'TEX26', 'NUP153', 'ZNF273', 'TMEM119', 'ZSCAN4', 'C10ORF128', 'CCL15.CCL14', 'MALAT1', 'MAGI2', 'SLC22A18', 'UTF1', 'GKN2', 'TNFRSF11B', 'TTLL9', 'SNORD114.10', 'LINC00608', 'PEPD', 'CLRN1.AS1', 'CD8B', 'C20ORF24', 'MGAT4C', 'LOC727896', 'LINC00661', 'GTF2A1L', 'PCDHA2', 'BID', 'AOC2', 'ACY1', 'GUCA1C', 'GLI2', 'CDC6', 'C10ORF95', 'ACTA2', 'DCLRE1C', 'MAPK8IP1', 'FGF20', 'ABI2', 'CCDC113', 'HSPA5', 'VPS4A', 'CLEC10A', 'FAM200A', 'SNORD15A', 'ANP32C', 'RXFP4', 'NOVA2', 'SLC7A10', 'HOXA9', 'OR4C16', 'SLITRK5', 'ZSWIM5', 'SNORD116.10', 'LEUTX', 'CDKL4', 'PTPN2', 'LIX1', 'LEFTY1', 'UIMC1', 'ZFAND3', 'RCCD1', 'RPL41', 'TK2', 'ATP6V1D', 'MFSD4', 'ALG10', 'MYCN', 'NDUFV1', 'NFYC.AS1', 'FAM155A', 'PIP5K1A', 'CNTF', 'CFLAR', 'LINC00493', 'ZNF561', 'OR5M1', 'ERN1', 'C14ORF39', 'CADM4', 'ID2', 'LYN', 'EPHX2', 'ATP11C', 'BRPF1', 'USP7', 'PRR15', 'AIF1L', 'APRT', 'ADAM12', 'SLC46A1', 'EHD4', 'GBP7', 'IL13RA1', 'TRIM32', 'ADAMTSL2', 'TMPRSS4', 'ORM1', 'MPPE1', 'CALHM3', 'NID2', 'GPX6', 'UBALD2', 'MYO1F', 'PSMB5', 'CCR7', 'PRMT5', 'GPRASP2', 'COX4I1', 'TPTE2P6', 'OR13C2', 'LRGUK', 'TM9SF2', 'ZCCHC10', 'TNFAIP8L2', 'DDC', 'RAD51D', 'ST8SIA6', 'MAOB', 'GTF2IP1', 'USP18', 'TMEM69', 'CALCA', 'NBEAL1', 'GLA', 'COMP', 'AGAP2', 'HRSP12', 'RBM42', 'PYDC1', 'INCA1', 'CARD11', 'MXD4', 'TARP', 'FUBP1', 'RXFP2', 'NLRP8', 'HIATL2', 'SNAP23', 'FAM225A', 'SMPD3', 'BMP15', 'CENPU', 'TMEM106C', 'CHKA', 'MBTPS2', 'RPIA', 'KANSL2', 'CT83', 'UBE2F', 'BUD13', 'GIPC1', 'SNORD114.27', 'TP53I3', 'PMCHL1', 'TCHHL1', 'IZUMO2', 'TFF1', 'MYLIP', 'MORN2', 'NDUFS5', 'IMMT', 'KAT7', 'RAB11FIP1', 'SLC25A12', 'FAM49A', 'CPSF1', 'GRB2', 'CCDC130', 'TSPAN12', 'GPATCH4', 'C14ORF119', 'KPNA7', 'TTL', 'PLEK', 'PHYHIP', 'ABCB5', 'PACRGL', 'KRT78', 'CST6', 'TSPAN18', 'FLJ36777', 'C9ORF114', 'SORT1', 'DZIP1', 'C4ORF3', 'CCDC167', 'SIX6', 'GVINP1', 'FUT8', 'ABHD16A', 'POSTN', 'PEX11G', 'PDHB', 'CHRNA10', 'ZNF778', 'DNASE2', 'KLK3', 'ACTR3B', 'SCAF4', 'SNORD90', 'OR10A7', 'WDR90', 'SNORD50A', 'AES', 'SNORD65', 'TMTC3', 'DNAJB13', 'GNLY', 'HNRNPA3', 'OR8I2', 'PADI3', 'HSPBAP1', 'TRIOBP', 'KHSRP', 'NAALADL1', 'HNRNPD', 'IL18RAP', 'TIMP2', 'NBEAP1', 'DIMT1', 'ATPIF1', 'KIAA0753', 'TAS2R46', 'OR5B17', 'CCT7', 'TPRG1', 'PARD3', 'CALM2', 'REXO2', 'OR6P1', 'MDM2', 'LINC00160', 'PADI6', 'PCDH8', 'IQCF5', 'ADAM18', 'LPCAT3', 'RABL2B', 'B9D2', 'ATG12', 'RTP1', 'C3ORF33', 'WWOX', 'TPM3P9', 'SYS1', 'NCMAP', 'KIAA1919', 'OR6C76', 'KCNG3', 'CPSF4', 'LOC340017', 'TYMSOS', 'LIN28A', 'OR6M1', 'PIK3C2B', 'GNAQ', 'UBE2I', 'MFSD2B', 'CARD9', 'HMSD', 'CAP2', 'DUSP5', 'ARID5A', 'LINC00052', 'OR6V1', 'PCSK1', 'IL16', 'PAX7', 'RAB3C', 'PRY2', 'LINC00598', 'HSDL1', 'RPL24', 'MRPS12', 'COPS6', 'L3MBTL3', 'FGF7', 'CHCHD6', 'ZNF613', 'TUBA3FP', 'R3HDM4', 'ATP5O', 'ADAMTS7', 'MIR7.3HG', 'SPDYE3', 'PTPN5', 'PARG', 'RQCD1', 'PRMT7', 'CAPN5', 'ZDHHC8P1', 'TXNDC5', 'MIAT', 'PLCB2', 'SLC5A1', 'TMEM123', 'ZNF461', 'WDR18', 'SYNJ1', 'ARL5A', 'GLMN', 'ARGFXP2', 'FMR1', 'TP53INP1', 'NET1', 'PDPK1', 'KHDRBS1', 'ICA1', 'SNAR.H', 'ADAM5', 'MTHFD1L', 'FSTL1', 'BTK', 'OR51I2', 'HES5', 'MEPE', 'SDR16C6P', 'PDGFD', 'ETS1', 'NDRG3', 'RHBDD1', 'SNORD116.13', 'TERF2', 'ODF4', 'PIK3C2G', 'PCGEM1', 'CYB561', 'MRGPRX4', 'DGKA', 'GPATCH2', 'PRG2', 'THBS3', 'DEFA6', 'GFER', 'KRTAP12.4', 'IL4I1', 'PAXIP1.AS2', 'LURAP1L', 'ATP2A1', 'LINC00634', 'CYP27B1', 'PCDH1', 'S1PR4', 'ZNF800', 'PHLDB1', 'LMO2', 'PRAMEF6', 'CCKBR', 'SNORA41', 'MRAP', 'GABRA2', 'MAPT.AS1', 'CSF3', 'CXCL2', 'CFL1P1', 'UGT1A9', 'FAM181B', 'SESN3', 'CIPC', 'UBE2E3', 'SPTAN1', 'ZNF676', 'FBLIM1', 'FAM170B', 'KIAA0586', 'PDE4DIP', 'PRR30', 'C3AR1', 'ZBTB9', 'CFAP57', 'CRIP3', 'LIMCH1', 'KIAA0195', 'CPLX3', 'METTL13', 'GPR65', 'THEG', 'AKR1C8P', 'ACOT9', 'RGPD6', 'SCAF8', 'SFXN2', 'DPP4', 'C12ORF43', 'KPRP', 'IFFO1', 'DNAH3', 'PCID2', 'CAB39L', 'HPN.AS1', 'LYZ', 'CITED4', 'LAMA5', 'MYO6', 'PMEPA1', 'TUBA1A', 'TRIM40', 'BCCIP', 'MED13', 'OMP', 'MEIG1', 'ZNF133', 'SGK494', 'FAM99A', 'CPEB1', 'SCGB1C1', 'GNMT', 'NEUROD4', 'OR10C1', 'PPP1CB', 'CTRB2', 'CLDN5', 'SLC30A9', 'GCN1L1', 'ZNF347', 'PTPRH', 'FAT2', 'EPB41L3', 'WDR72', 'EAF1', 'TNF', 'DCUN1D2', 'TEAD1', 'POLA2', 'MZT2B', 'SLC1A4', 'LSS', 'SNORA61', 'FAM95B1', 'HGS', 'PHGDH', 'KIAA1456', 'ANXA7', 'TRIM60', 'ROBO1', 'KIAA0895', 'PRR20D', 'NAT8L', 'CYFIP1', 'ACER1', 'TAAR2', 'IRX1', 'PSG8', 'TMCO1', 'OR2J2', 'PGM1', 'ABCA4', 'LCE3A', 'FAM92A1', 'RNF7', 'SLC4A11', 'CA7', 'SNORD11', 'P2RX7', 'HIST1H2AL', 'LEPROT', 'SMYD2', 'TAS2R8', 'BICD2', 'ZNF644', 'KRTAP13.4', 'SIN3A', 'BCL2', 'SHC1', 'MAN2B2', 'PUS7', 'TPD52L2', 'ANKRD53', 'CLEC4C', 'CNIH3', 'ROBO4', 'BTBD7', 'GALNT5', 'EFHD1', 'SPAG16', 'NPR2', 'STX4', 'RPN1', 'ZNF295.AS1', 'PCDH11Y', 'USO1', 'SLC22A16', 'RPL35', 'SIRPB2', 'SLC17A8', 'SNORA68', 'CABP5', 'ANXA13', 'DNAJB14', 'PLEKHG4', 'CHRM4', 'ADAMDEC1', 'TAF11', 'OR13C4', 'COL9A3', 'FXYD3', 'CLTA', 'GNGT1', 'RASSF9', 'ASTE1', 'RYK', 'HES1', 'ZXDB', 'OR1A1', 'ZCCHC8', 'TLR2', 'RPL13AP20', 'KRTAP13.2', 'C3ORF22', 'SNORD27', 'CXADR', 'AFG3L2', 'ZNF236', 'C15ORF57', 'RBM41', 'STRADB', 'LINGO3', 'NUB1', 'ZNF350', 'CIB4', 'METTL23', 'CASC8', 'NPY2R', 'ETFB', 'RARA', 'BRCA2', 'SGSH', 'SLC38A5', 'COX10', 'RAB17', 'BEND3P3', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 0.8164011052540465 Spearman Correlation: 0.7008037317384755 Coefficient of Determination: 0.6665107353404247 RMSE: 0.5664119969137995 NRMSE: 0.09649760582547652 MAPE: 536.9727152405925 Pearson Correlation: 0.06841234464332098 Spearman Correlation: 0.25893778959286173 Coefficient of Determination: -1.7336880407291334e+17 RMSE: 431642649.066767 NRMSE: 77725834.4557869 MAPE: 243547307841.65512 Predictor: ElasticNet Pearson Correlation: 0.6737915460489668 Spearman Correlation: 0.6103084499025719 Coefficient of Determination: 0.42876735141274624 RMSE: 0.7413068701557224 NRMSE: 0.12629382594608282 MAPE: 1253.9467548289924 Pearson Correlation: 0.46380480200176133 Spearman Correlation: 0.43680648986491377 Coefficient of Determination: 0.1762890630457623 RMSE: 0.9408627807065019 NRMSE: 0.1694210358890953 MAPE: 284.09822265577685 Predictor: RandomForests Pearson Correlation: 0.5652259779093062 Spearman Correlation: 0.5068998508749553 Coefficient of Determination: 0.20598171432032875 RMSE: 0.8739906093037129 NRMSE: 0.1488986846523183 MAPE: 672.5137069486441 Pearson Correlation: 0.32216841392363826 Spearman Correlation: 0.37542160802733465 Coefficient of Determination: 0.03699211172228756 RMSE: 1.0173111273133506 NRMSE: 0.18318707950325036 MAPE: 237.56402206321502 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['UROD', 'PLP1', 'NWD1', 'TMC5', 'MDP1', 'AMELX', 'NSMCE1', 'HIST1H2BD', 'RCVRN', 'KRTAP4.4', 'F13A1', 'G0S2', 'LRRTM4', 'IZUMO1', 'GUCY1A2', 'C1ORF174', 'CHN2', 'SLC2A7', 'MDH1', 'RLTPR', 'GPATCH2L', 'SUSD2', 'CCDC130', 'IL12RB1', 'SUGCT', 'KLHL26', 'LEAP2', 'INTS12', 'PCBD1', 'MAPKAPK3', 'PCDHB15', 'SYCE3', 'ROBO2', 'PAX1', 'FAM83G', 'TRAPPC10', 'BPIFA1', 'YIPF1', 'AEBP2', 'CTPS2', 'NT5DC3', 'CENPBD1P1', 'BTG2', 'TP53I13', 'PCED1B', 'NIF3L1', 'GBA2', 'CFAP20', 'PLA2G16', 'FOXI1', 'DVL3', 'OR52L1', 'LOC100133331', 'SNRNP48', 'PLAC8L1', 'SLC46A3', 'DDRGK1', 'CHML', 'ALG8', 'C7ORF57', 'FAM178B', 'GLRX3', 'CDK1', 'RAD1', 'ATG12', 'KRTAP9.4', 'ATXN10', 'ZNF781', 'ZCCHC24', 'LINC00636', 'ANKRD20A3', 'RAB8A', 'GOPC', 'FASTKD2', 'BRD7P3', 'PPFIA2', 'STOML1', 'PEBP1', 'MED6', 'ARHGEF26', 'RWDD3', 'DEPDC4', 'ERP44', 'SLC22A15', 'LCE1F', 'VHL', 'DHX32', 'TTLL9', 'AGBL4', 'KLHDC7B', 'RPL28', 'PRKAA2', 'KRTAP6.3', 'HNRNPDL', 'FILIP1', 'ZFP82', 'FMO2', 'CMSS1', 'PLA2G6', 'MTFR1', 'SEC24A', 'RNASE10', 'RBBP8', 'AP3M2', 'IRX2', 'FKRP', 'LOC221122', 'FAHD2A', 'MAST4', 'ANAPC2', 'RRP7BP', 'COX7C', 'HS6ST3', 'WIBG', 'CPNE6', 'CA13', 'ZC3H3', 'B4GALNT3', 'BOK', 'ELAC1', 'CELSR3', 'CD8B', 'CACNB3', 'GOLGA8B', 'CT45A6', 'LINC00667', 'AUTS2', 'CDH12', 'TMEM87B', 'BIRC8', 'KCNAB3', 'NR2E3', 'ACOX3', 'USP14', 'NARF', 'RFX6', 'SLFN12', 'TRMT2B', 'ZNHIT3', 'ZNF665', 'SYF2', 'PANK4', 'TMEM147', 'TMEM145', 'ICAM2', 'HRK', 'TMEM2', 'C16ORF78', 'FRG2C', 'BEST1', 'EIF2S3', 'CD27', 'CDKN2A.AS1', 'RAB11FIP4', 'C11ORF87', 'POLR1C', 'RC3H2', 'SYCN', 'TMEM207', 'TUBB4A', 'VSIG2', 'TSC2', 'IL16', 'CHTF18', 'PKNOX1', 'CEACAM22P', 'TLR9', 'ATP6V1E2', 'RALB', 'SLC30A9', 'CDIPT', 'DHRS9', 'GPHB5', 'AFF4', 'SMARCD3', 'FGF3', 'ARHGEF35', 'SGMS1', 'SNX16', 'ATP6V0D1', 'LRRC75A.AS1', 'DHRS7', 'HPCAL4', 'FAM217B', 'ALDH1A3', 'MYO5A', 'MYL3', 'BCORP1', 'RGL3', 'VILL', 'EIF4B', 'FAM185A', 'TMEM126A', 'MOGAT3', 'ZNF843', 'EEF1E1', 'KCNAB2', 'ARL13B', 'KLK5', 'SERPINA9', 'MPLKIP', 'RBX1', 'ULK4', 'RGL2', 'SPIRE2', 'SOD3', 'SNORA45A', 'B3GNTL1', 'SLC4A5', 'SEC16B', 'ECHS1', 'WDR45B', 'SNX1', 'CEP162', 'RXRB', 'PCDHB12', 'BRCC3', 'DMRTC1B', 'PRRT1', 'ZNF157', 'EEFSEC', 'GBP4', 'EEF1A2', 'FBXO3', 'PCNX', 'DUSP6', 'TFRC', 'WFDC6', 'ING1', 'FAM188B', 'LOC728392', 'MSMB', 'EYA3', 'ZMYND10', 'SGK1', 'LHX2', 'TBC1D23', 'VNN2', 'USP6NL', 'SLCO4C1', 'EPB41L1', 'C10ORF71', 'DEFA6', 'TLX2', 'FLJ16779', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.4934715409100514 Spearman Correlation: 0.4270369535906255 Coefficient of Determination: 0.2376158200303664 RMSE: 0.4171157439175989 NRMSE: 0.11405361600507465 MAPE: 222.0808026915023 Pearson Correlation: -0.14952320477845563 Spearman Correlation: 0.23630605685697287 Coefficient of Determination: -9.561663309719888e+25 RMSE: 3760575762270.821 NRMSE: 1850977650046.9175 MAPE: 144701534199968.6 Predictor: ElasticNet Pearson Correlation: 0.3719508058441757 Spearman Correlation: 0.3870333291784485 Coefficient of Determination: 0.12200973373816437 RMSE: 0.4476251660969574 NRMSE: 0.12239592859461976 MAPE: 224.62282207940248 Pearson Correlation: 0.33572645216859887 Spearman Correlation: 0.3541964363645432 Coefficient of Determination: 0.1096624446327833 RMSE: 0.36288161479876835 NRMSE: 0.1786124787976238 MAPE: 199.10741866732698 Predictor: RandomForests Pearson Correlation: 0.40942076906321223 Spearman Correlation: 0.37955927430054637 Coefficient of Determination: 0.12182812354106076 RMSE: 0.44767145880336356 NRMSE: 0.12240858659335817 MAPE: 228.45125979639215 Pearson Correlation: 0.13914290529687534 Spearman Correlation: 0.3357000707891413 Coefficient of Determination: -0.024724676451726824 RMSE: 0.38930610689758627 NRMSE: 0.19161877022232265 MAPE: 247.50835125932008 Fold: 5 Protein: RB1 x_train_column_count: 371 x_train columns: ['FAM189A1', 'IPO7', 'DLL3', 'ABRACL', 'HIRIP3', 'CAGE1', 'GDAP1', 'UTRN', 'EFCAB10', 'TMEM223', 'SSMEM1', 'CCM2', 'GLT8D1', 'PLEKHG7', 'PATE3', 'MAPT.IT1', 'IGF2.AS', 'ZBED4', 'DDX3X', 'DENND2C', 'BTBD2', 'SEC11A', 'GMDS', 'OR8K3', 'ZNF541', 'CCDC102A', 'SPR', 'EPOR', 'ZNF30', 'NANS', 'FLJ30679', 'ACE2', 'TNFAIP8L3', 'MYLPF', 'COL15A1', 'MIAT', 'MLEC', 'UBR3', 'EMC2', 'TMEM196', 'MAP4K2', 'YIF1A', 'IKBKG', 'PTPN20', 'PCP4', 'DOCK9', 'ANTXR2', 'C11ORF68', 'GCNT3', 'PFKFB1', 'FHL3', 'TRA2B', 'SGSM1', 'PRIMA1', 'EDF1', 'SLC4A2', 'GCK', 'POLR3B', 'ZBTB11.AS1', 'ETNPPL', 'LY6E', 'CELP', 'GAK', 'HOMEZ', 'PARVB', 'UGT3A1', 'TUBD1', 'HIPK1', 'CDHR5', 'FGR', 'YJEFN3', 'OR2W1', 'IGFBP3', 'MGARP', 'BRWD1', 'DIS3L2', 'CAMTA1', 'PPIL3', 'C19ORF66', 'IGFBPL1', 'BDNF', 'LINC00917', 'TSPAN14', 'QKI', 'TPBG', 'GP5', 'PITPNA', 'ACVR1C', 'GDF2', 'FAM83C', 'KIAA0101', 'TCL6', 'GLT1D1', 'CLK1', 'KIR2DL1', 'DEFB113', 'GAA', 'CCSAP', 'NABP2', 'ANKRD34B', 'RINT1', 'LCE1A', 'TOE1', 'CD72', 'KIFC3', 'RELL1', 'CPB1', 'LOH12CR2', 'FAM26D', 'GLUD2', 'SMAD2', 'BTG1', 'PSG4', 'BEND2', 'MTHFD2', 'TNPO1', 'EHF', 'ZNF234', 'TRRAP', 'MCAM', 'POLE2', 'GABRA3', 'JADE2', 'EME2', 'MS4A1', 'KLF4', 'SENP2', 'INF2', 'LDAH', 'ZNF468', 'DDX17', 'CNR2', 'GPR155', 'PLIN4', 'CCDC14', 'NLRP1', 'MKS1', 'PPP3CC', 'HAAO', 'RRP8', 'TMEM204', 'SH2D1B', 'CDH7', 'PPIL1', 'ZNF284', 'PDGFRL', 'MPP6', 'TNKS', 'MYL1', 'NR2C2', 'EPHA4', 'TPMT', 'DUSP16', 'NOL11', 'SPRY2', 'SLC22A8', 'PALLD', 'CFAP70', 'SNAPC3', 'KLHDC1', 'EIF2A', 'GTDC1', 'TRIM36', 'CNIH1', 'DCD', 'NDUFAF2', 'C17ORF74', 'PIF1', 'G6PC', 'DUX4L2', 'TMEM87B', 'C3P1', 'GALNT12', 'GPR37', 'SH2B3', 'CCDC186', 'P3H1', 'NDUFS4', 'NPC1L1', 'RAI2', 'SPRR2A', 'SERINC4', 'NFYB', 'RBM38', 'RAB11B', 'EMX2OS', 'TROVE2', 'TAF5', 'OR11A1', 'CPXCR1', 'C12ORF4', 'CXORF40A', 'ANKRD20A9P', 'BRCA1', 'C1QTNF9', 'FGF23', 'TTC4', 'CSPP1', 'STX1A', 'ZFAS1', 'OR2G2', 'SPAG17', 'EIF2S1', 'KRTCAP3', 'C3ORF79', 'FUZ', 'AP3D1', 'CNBP', 'POM121L12', 'SLCO1C1', 'SGIP1', 'LINC01001', 'PNPO', 'GPR26', 'COMTD1', 'GFM1', 'OR5I1', 'LINC01550', 'CSTF1', 'ZNHIT2', 'ARHGEF16', 'RAB27A', 'CTNNA2', 'MRPL54', 'MS4A13', 'PQBP1', 'ISOC2', 'FGF14', 'HPN.AS1', 'CDK15', 'ARHGAP39', 'TUSC3', 'CFAP97', 'EGR3', 'C3ORF62', 'DNAL1', 'ABCG5', 'NFIC', 'MNDA', 'SDHAP2', 'ZNF510', 'PARP9', 'IL36A', 'MRPS10', 'ZNF764', 'ARHGAP9', 'ZNF586', 'STON1.GTF2A1L', 'SH2D6', 'FLNA', 'DDX4', 'YWHAE', 'MRPL3', 'ARHGAP29', 'SLC6A11', 'MARVELD2', 'ATOH8', 'VEGFA', 'C6ORF120', 'MBIP', 'PREX2', 'PGS1', 'MYO3B', 'PRKCA', 'PRR35', 'PWAR4', 'HSP90B3P', 'KCNS2', 'RBP5', 'STK32B', 'LOC100130987', 'PTENP1', 'SNX14', 'PVRL4', 'FAM86C2P', 'INPP5F', 'USP22', 'CEACAM22P', 'HDDC3', 'STON2', 'DHRS2', 'ERCC6L', 'RHOXF1', 'TADA2A', 'INE2', 'HDAC3', 'NOS3', 'BCL6B', 'GKN2', 'CHRM3', 'MOB3A', 'CCDC53', 'TNXB', 'MAPKAP1', 'TUBGCP2', 'PGBD1', 'TAS2R5', 'ZRANB2', 'ARHGEF38', 'METRNL', 'KIF18A', 'PCGF5', 'SPTY2D1', 'PCGF6', 'BTBD17', 'SPNS2', 'CPEB1', 'COL6A1', 'ZNF180', 'PON1', 'LINC01106', 'TMIE', 'SLC25A52', 'MYOCD', 'DHRS3', 'NAPB', 'ADNP', 'GGT6', 'ANP32AP1', 'GOLGA7', 'NDUFC1', 'B3GALT2', 'L3MBTL3', 'GLIS2', 'RBMY1A3P', 'KCTD13', 'PCDHGB7', 'DOCK10', 'OR13C3', 'WDR92', 'TRANK1', 'SFTA1P', 'SNORD88A', 'CSF3R', 'LARGE', 'MTG2', 'OBSL1', 'ENAM', 'KIF1A', 'KLRC1', 'FAM50A', 'COL9A3', 'KIAA2013', 'MOB1A', 'GPR65', 'ITGA4', 'OR9A4', 'RAB11FIP1', 'WDR38', 'CNGA3', 'CDH11', 'CPN2', 'ESF1', 'ATP4A', 'ANKRD26P1', 'MACF1', 'GLDC', 'RAB11FIP5', 'TAAR9', 'GBP3', 'ASIC2', 'GAST', 'OR51T1', 'NEU3', 'GTPBP10', 'TREML3P', 'KCTD17', 'MPHOSPH10', 'APOBEC3F', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.3718695976530435 Spearman Correlation: 0.358297061108674 Coefficient of Determination: -0.4681256632027806 RMSE: 0.28341396043032774 NRMSE: 0.14001074997916627 MAPE: 713.3022817559951 Pearson Correlation: -0.0068138596284733795 Spearman Correlation: -0.017932656710047023 Coefficient of Determination: -1.967363296389902e+25 RMSE: 1066158241085.1082 NRMSE: 537562390882.5143 MAPE: 248505377530026.56 Predictor: ElasticNet Pearson Correlation: 0.3008226064350746 Spearman Correlation: 0.27600339969624804 Coefficient of Determination: 0.07018890017967438 RMSE: 0.22554696471581345 NRMSE: 0.11142358561814292 MAPE: 165.43302024534609 Pearson Correlation: 0.006518892839764337 Spearman Correlation: 0.011217447150899453 Coefficient of Determination: -0.12802114382543328 RMSE: 0.2552924704100896 NRMSE: 0.1287197579866535 MAPE: 300.8574696933643 Predictor: RandomForests Pearson Correlation: 0.419134510984045 Spearman Correlation: 0.3486167653451795 Coefficient of Determination: 0.11138877898600263 RMSE: 0.22049336242861572 NRMSE: 0.10892703024291493 MAPE: 154.64604664284292 Pearson Correlation: -0.06632033155374528 Spearman Correlation: -0.02845172633075226 Coefficient of Determination: -0.13911169728171902 RMSE: 0.25654440149391966 NRMSE: 0.1293509879867695 MAPE: 363.31488386151574 Protein: CDH1 x_train_column_count: 836 x_train columns: ['CHID1', 'ZFHX4.AS1', 'AMBN', 'NUDT5', 'CETN2', 'PBX4', 'PM20D1', 'CCDC71', 'BSG', 'SLC17A8', 'TNFRSF10B', 'PPIE', 'HNRNPH3', 'NMRAL1', 'ARL4D', 'WIBG', 'PGBD5', 'DUSP5', 'TATDN1', 'SNX8', 'SF1', 'SORD', 'SIRPB1', 'KDM5B', 'MRPS16', 'NKX2.4', 'GPR18', 'FBXO15', 'CYHR1', 'SUPT16H', 'TBC1D29', 'ZNF23', 'JUN', 'HSPA9', 'AQP4.AS1', 'TMEM169', 'TSPAN8', 'RPS27', 'HS3ST6', 'RMDN1', 'ABCF1', 'USH1G', 'SFT2D1', 'ZNF202', 'SEPHS1P1', 'TBX15', 'TMEM176A', 'STARD8', 'ELSPBP1', 'RTP4', 'SLC39A5', 'GCLC', 'CAPN15', 'LRRC28', 'SEMA5B', 'SAMSN1', 'CDH4', 'FAM197Y2', 'CPO', 'PI4KAP2', 'PLEKHO2', 'PUM2', 'SCG5', 'OR9G4', 'CORO6', 'MED30', 'C1ORF185', 'LINC01106', 'CXCR3', 'MAN2B1', 'FAM168A', 'SYNJ2', 'LINC01559', 'RAC2', 'FAM47A', 'RABEP2', 'LOXHD1', 'CAMSAP2', 'CDK2AP2', 'TRIM58', 'BNIP1', 'IQSEC1', 'CKMT1B', 'CATSPER1', 'SLC10A7', 'RHOBTB3', 'SOGA3', 'SNCG', 'ERI2', 'KRTAP12.3', 'IMPDH2', 'OR2D2', 'LPCAT1', 'MEP1A', 'FAM134B', 'ZNF227', 'ZDHHC23', 'ELF5', 'NLRP5', 'ATF5', 'OR13C3', 'MAN2A2', 'ARMCX2', 'YWHAE', 'ACER1', 'FRMPD4', 'PCDHGB2', 'DIO1', 'PEAR1', 'MALSU1', 'ANGEL2', 'LAMP1', 'METTL17', 'CLDN10', 'NCF4', 'YTHDC1', 'MYOF', 'CHRNA3', 'RBM17', 'TARDBP', 'CNIH2', 'IBA57', 'MPST', 'MRPL42P5', 'NAALAD2', 'SNORD114.22', 'UFL1', 'TTLL6', 'RPLP1', 'GRIN2D', 'TBC1D10A', 'PROS1', 'ITPKC', 'LINC00326', 'TYMP', 'NKAIN4', 'GALT', 'ADAMTS18', 'CNBD2', 'DNAI1', 'MMS22L', 'FAM118B', 'ATP1A2', 'ZNF25', 'RASA1', 'C9ORF64', 'STX12', 'C10ORF55', 'SLC26A3', 'B3GNT9', 'KLHL5', 'KLF13', 'COMMD4', 'PRSS23', 'GRK4', 'CNPPD1', 'TBL3', 'HGC6.3', 'LDLRAD2', 'MTCP1', 'RGS13', 'TEDDM1', 'MYO1F', 'F2R', 'WNT10A', 'C5ORF46', 'DSC2', 'P3H3', 'CGN', 'MYT1', 'PTP4A2', 'MOCOS', 'SSX2', 'MAP3K14', 'DOCK9', 'MIR143HG', 'SLC15A4', 'C2CD3', 'NXPE3', 'E2F1', 'C20ORF24', 'PCDHGA11', 'OR8G2', 'C2CD2', 'CRYBB2', 'AMBP', 'PER4', 'CCDC9', 'WIPI1', 'ANK2', 'NOS2', 'ZNF831', 'VMAC', 'LOC154449', 'MMP16', 'HSPA1L', 'SLC38A3', 'ANKRD20A4', 'C5ORF47', 'SRBD1', 'CAPN1', 'FAM210A', 'GULP1', 'HLA.DRA', 'PLA2G2D', 'DEFB118', 'VHL', 'SMU1', 'OR10G9', 'ACOT6', 'FAM138D', 'KLK10', 'EXT2', 'AP2B1', 'ABCD1', 'MRPS34', 'YBX1', 'N4BP2L2.IT2', 'PRRT1', 'SNORD115.1', 'SLC6A17', 'HSD17B10', 'PMCHL1', 'TNIP2', 'C1QBP', 'HYALP1', 'PRB1', 'GOT1', 'TMEM181', 'WDR63', 'PPBPP1', 'FAM195A', 'SNAI3.AS1', 'MZF1', 'SNORD70', 'CAPS2', 'CARD8', 'ZNF557', 'SIDT2', 'ENDOG', 'SMO', 'MOSPD2', 'MAPKAPK5', 'CEP135', 'ZBTB40', 'ARID3B', 'EIF5', 'HMOX2', 'SYTL1', 'ABCB11', 'BOD1L1', 'PRKCB', 'SNORA14B', 'ULK4P3', 'SEC16B', 'SLITRK1', 'KRT222', 'SPAG17', 'HENMT1', 'PLEKHA4', 'LINC01098', 'MCF2L2', 'TCEAL4', 'SON', 'SCMH1', 'TMEM211', 'GZF1', 'GALR3', 'TERT', 'S100A16', 'CBWD1', 'ATF6', 'EOMES', 'RASSF8', 'MTMR11', 'PKP4', 'FHL1', 'FAM20B', 'KLHDC8A', 'AADACL4', 'ITGA8', 'GNGT1', 'ZBTB8OS', 'MSTO2P', 'MBP', 'CMTM8', 'SRRD', 'STYX', 'CRYGB', 'AGTPBP1', 'YWHAB', 'COX16', 'APMAP', 'CHKB.CPT1B', 'VPS72', 'PPP1R14B', 'METTL7B', 'ZNF823', 'TTC27', 'SNORA9', 'TM7SF3', 'RWDD2A', 'BTBD1', 'TMEM38A', 'AMOTL1', 'PTF1A', 'LRTOMT', 'CREB3L1', 'TXK', 'HMG20B', 'AGER', 'SLED1', 'ARHGEF11', 'VPS26B', 'TEAD4', 'WARS', 'KIAA0922', 'CXORF21', 'HERC5', 'TEX12', 'CCDC81', 'LMNTD2', 'CENPL', 'RAB3IL1', 'TAF1L', 'TAS2R10', 'ARPP21', 'CEP44', 'MFSD11', 'DDX21', 'ITIH5', 'DCAF7', 'WNT2B', 'TTLL7', 'SEMA7A', 'ZNF773', 'ARL16', 'FCF1', 'LINC00298', 'FARP1', 'TNFAIP8L3', 'RNF41', 'DLEU7', 'MYBPC2', 'CACNA1C', 'CDKL4', 'CAPZB', 'STX10', 'TPRN', 'LINC00597', 'LMOD2', 'POU4F3', 'MRPL17', 'ADAMTS6', 'UBE2Q1', 'BMP8B', 'FCGR3A', 'OBP2A', 'NNMT', 'TMEM132C', 'TREML1', 'SMOX', 'NEK4', 'ZNF706', 'ASPRV1', 'VTRNA1.3', 'EHF', 'CHD1', 'CRCP', 'SAMD1', 'SLC6A19', 'C19ORF52', 'SLC48A1', 'PCSK1N', 'PSMD12', 'P2RX4', 'AIF1L', 'ZNF493', 'OR3A2', 'NEDD4', 'SPZ1', 'GRIA3', 'AS3MT', 'MS4A15', 'FAM114A2', 'MVB12A', 'ZNF567', 'FKBP7', 'RAB26', 'CTDSP2', 'ACOT4', 'TDRD3', 'GATAD1', 'TRIM16L', 'ARHGAP10', 'KRT76', 'LINC00304', 'SNORD45A', 'ZNF839', 'BHMT', 'AGPAT1', 'ANKFN1', 'ZNF252P', 'EGLN1', 'EVX2', 'GNAL', 'CCDC108', 'SV2B', 'WFDC9', 'SGSH', 'PRRG2', 'HACE1', 'FBXW8', 'C19ORF80', 'ODF3', 'KRT72', 'IL20RA', 'FUBP3', 'TMEM189.UBE2V1', 'ASAP1', 'KCNQ5', 'HIST1H1T', 'ASB17', 'H1FNT', 'MAP3K1', 'FAM19A1', 'SNHG3', 'PGAM1', 'AGMAT', 'APOL5', 'TUBB4A', 'DYNLT1', 'CCM2', 'FRRS1L', 'UTP3', 'ITGB1BP2', 'GRTP1', 'AFMID', 'FYTTD1', 'NCALD', 'PLAGL2', 'BHLHA15', 'CTSG', 'CHRNB3', 'EMC4', 'CISH', 'STXBP2', 'FZD2', 'STK19', 'MCM2', 'NAT2', 'KIAA1429', 'SPATA6L', 'CNIH3', 'RSPH3', 'SNORD116.13', 'TRIM61', 'NGRN', 'NDP', 'FAM110D', 'TENM1', 'CXCL8', 'USP51', 'ZNF559', 'SIAH3', 'DOC2A', 'ERCC2', 'KRBA1', 'CHRD', 'ZDHHC8P1', 'NDUFAF2', 'TMEM260', 'ALS2', 'RMI2', 'CDH6', 'OXCT2', 'SERPINA4', 'LPAR3', 'MKRN1', 'TMPRSS9', 'TRPC3', 'TWF2', 'PKP1', 'HCG4B', 'CUL9', 'ATG9B', 'ARHGDIG', 'ATP5G2', 'SPIB', 'ASCC2', 'IGFBP2', 'YWHAQ', 'FAM167A.AS1', 'ARHGEF33', 'ARID5A', 'CELF5', 'MYCBP2', 'MYLPF', 'DHRS4', 'HEPACAM2', 'HIST1H2BK', 'SNORD65', 'CLP1', 'ADGRE4P', 'AOC2', 'UBL5', 'PSME3', 'ICOSLG', 'KIF4A', 'SOX1', 'DIDO1', 'RAPSN', 'USH1C', 'SLC4A4', 'DNAJC14', 'ABL1', 'WDFY3.AS2', 'SLC45A3', 'NUP188', 'HOXD10', 'CORIN', 'KLRB1', 'OR14C36', 'AKR1B15', 'SMPD1', 'UBR7', 'TDGF1P3', 'SLC26A2', 'FAM3A', 'FAM105A', 'LRRC8A', 'ARHGAP11A', 'SLC6A9', 'SFRP1', 'RBSN', 'OMA1', 'VEGFB', 'TCTA', 'KRT9', 'ZNF271P', 'XPO4', 'LMOD1', 'ZP2', 'FBXL3', 'THOC6', 'ARHGEF15', 'OGFRL1', 'RGS22', 'FAF2', 'OLFML3', 'AK4', 'HCN4', 'SNRNP25', 'KCNMB3', 'LINC00301', 'WEE2.AS1', 'GPM6B', 'HFM1', 'CRP', 'ARHGEF2', 'IGF1', 'FAM150A', 'OTOA', 'WDR4', 'STUB1', 'MRPL3', 'NCK1', 'SERINC4', 'OCEL1', 'IFNW1', 'CEP68', 'OR5R1', 'FDCSP', 'NMNAT2', 'PNPLA5', 'SLC2A3', 'DAPK2', 'GFI1', 'HIST1H2BM', 'IFT80', 'BCORP1', 'OR6C4', 'GNL3', 'CRAMP1L', 'MAGEA10', 'ARPP19', 'KLHL10', 'PRAM1', 'PPP1R3D', 'LILRA6', 'FRG1B', 'HAUS7', 'ALPL', 'SRP14', 'CCDC66', 'FGF17', 'C2ORF47', 'NME1', 'GPR149', 'KCNU1', 'GPX7', 'CPTP', 'LGALS1', 'PCDHGC4', 'KIF6', 'KIF22', 'HMHA1', 'C6ORF201', 'DNAJC3', 'RGAG1', 'MGC16275', 'COMMD8', 'LINC00238', 'PMS2', 'SPATA7', 'CACNA1H', 'CLNS1A', 'KRTAP9.8', 'KCND2', 'NECAB2', 'RFX7', 'TRPC6', 'GDI1', 'TCF21', 'SLC46A1', 'FAM182B', 'ATP6AP1L', 'KCNJ4', 'ZNF738', 'PHYHD1', 'PIGU', 'DRAXIN', 'SNRPE', 'ECEL1', 'LINC00475', 'PPIP5K2', 'MIF', 'ANKMY2', 'TSTD1', 'DLEU1', 'SPATC1L', 'ZFAND5', 'SF3B5', 'KHK', 'RNF181', 'ALG9', 'NEXN', 'DPP8', 'MEMO1', 'ASXL2', 'CHRNA1', 'GAS2L2', 'PGLYRP3', 'TBRG1', 'CDH8', 'TMEM41B', 'SAMD8', 'RGR', 'KLRC4', 'LINC00923', 'FAM76A', 'SF3A2', 'ROBO1', 'ASMT', 'OR6N2', 'TMEM185B', 'GPR88', 'ISOC1', 'ZFAND2B', 'MAP3K2', 'DPY19L2P2', 'IL21', 'TNFAIP2', 'ST13P4', 'OR7C2', 'MPI', 'FBLIM1', 'MCF2', 'PDCD10', 'ERCC6L', 'SIGLEC16', 'IL17RC', 'OR8G5', 'TRIM37', 'TEX40', 'KDELC2', 'THAP9', 'FAM50B', 'MSH2', 'CX3CL1', 'MYL6B', 'CD27.AS1', 'TRMT10C', 'CYTH1', 'STMN4', 'ASIC4', 'OR5W2', 'GIPC2', 'SUSD5', 'SHROOM2', 'SPANXN4', 'KIAA1549L', 'DNM2', 'TTTY22', 'ZNRD1.AS1', 'SNORD91A', 'GUCA2B', 'INO80C', 'TIGD7', 'STON1', 'FTHL17', 'IRAK1BP1', 'SARS2', 'PIDD1', 'SCNN1D', 'LCN1', 'DIRAS3', 'OR8S1', 'FANCG', 'GTSE1.AS1', 'NFATC1', 'DCX', 'SMARCD2', 'MUC5B', 'RIPK4', 'TMCO3', 'SLX1B', 'SLC35B3', 'EPN2', 'TPX2', 'EAF1', 'ERGIC1', 'NLRC4', 'LRRC29', 'C12ORF49', 'WDR13', 'DEPDC5', 'HEPHL1', 'CDC42SE1', 'KLHL6', 'UBP1', 'DUSP9', 'RPS6KA1', 'OLAH', 'IL1B', 'EVI2A', 'SKAP1', 'C8ORF44', 'ATF3', 'CELA2A', 'LOC642929', 'CYP2U1', 'CCDC25', 'TPP1', 'RAVER2', 'AP3S2', 'CLPSL2', 'FAM69B', 'SPSB2', 'CAMKK1', 'FAM89A', 'NXF4', 'SNORD115.8', 'ZNF322', 'STYXL1', 'CST1', 'C17ORF104', 'SSX1', 'METTL22', 'SYCE1', 'ZIC3', 'UAP1', 'LOC100190986', 'KRTAP5.11', 'PLOD3', 'ZNF641', 'MTHFS', 'ADAMTSL2', 'PYGO1', 'ING1', 'LOC100133050', 'ATP1B1', 'ZCCHC13', 'PDHX', 'ZNF207', 'WDR7', 'TRANK1', 'KIAA1147', 'BORA', 'LRP2BP', 'SNORD121A', 'ZNF112', 'GNB3', 'KRTAP23.1', 'ANKHD1', 'MPV17L2', 'ACTRT2', 'JPH2', 'DDX1', 'KRTAP10.4', 'GPR176', 'CES5A', 'GOLGA8A', 'CD46', 'ABHD6', 'TBX2', 'TTPAL', 'MRTO4', 'GPR3', 'ITPR1', 'C1S', 'MBOAT7', 'TMEM161B', 'PER3', 'LRIT3', 'C5ORF58', 'NF1', 'PLCZ1', 'POLA1', 'C9ORF173', 'LRRC43', 'DEFB132', 'OPLAH', 'SUPT20HL1', 'NME1.NME2', 'CDV3', 'GALNT14', 'DKFZP434H168', 'ZNF503', 'RSG1', 'NUDT1', 'SNAI2', 'ZBED8', 'IL27RA', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.8491356763500273 Spearman Correlation: 0.7987218512162358 Coefficient of Determination: 0.6699294624996426 RMSE: 0.6469487009705457 NRMSE: 0.10301402837020249 MAPE: 262.6147651131188 Pearson Correlation: -0.11202992227244145 Spearman Correlation: 0.17673397881849987 Coefficient of Determination: -3.066894697403873e+23 RMSE: 643370708539.0792 NRMSE: 126520758399.8504 MAPE: 136929729142555.72 Predictor: ElasticNet Pearson Correlation: 0.7480773691319884 Spearman Correlation: 0.7006673001356393 Coefficient of Determination: 0.5248270893320552 RMSE: 0.7762333573008677 NRMSE: 0.1236001014777981 MAPE: 239.61930905815532 Pearson Correlation: 0.49543137973852125 Spearman Correlation: 0.47991371463484583 Coefficient of Determination: 0.24112404424232914 RMSE: 1.0120389992702588 NRMSE: 0.19902047143030793 MAPE: 1571.8965169041796 Predictor: RandomForests Pearson Correlation: 0.6603342851486207 Spearman Correlation: 0.5319568643870608 Coefficient of Determination: 0.4342575375854165 RMSE: 0.8469852614767792 NRMSE: 0.13486596947179694 MAPE: 171.125151555385 Pearson Correlation: 0.43661984691372335 Spearman Correlation: 0.41283851323848075 Coefficient of Determination: 0.15481119730200876 RMSE: 1.0680429544786092 NRMSE: 0.2100338153583232 MAPE: 472.44333747551605 Protein: CDH2 x_train_column_count: 474 x_train columns: ['PSMG1', 'SMR3B', 'LY6K', 'CEBPB', 'CHST8', 'NANS', 'NDUFB6', 'TMEM159', 'CLTCL1', 'GLT6D1', 'VCP', 'SLC9A3R2', 'FBXL3', 'CDH12', 'USB1', 'PSMD5', 'PHF20L1', 'IFIT1B', 'KRBA1', 'OGN', 'PROM1', 'ASPM', 'SCMH1', 'DEFB105A', 'NCF1', 'C10ORF10', 'CDKL4', 'VLDLR', 'RAB40A', 'TM6SF2', 'ZNF567', 'SKP1', 'ZNF839', 'ADD2', 'SNORD57', 'C9ORF163', 'RASA1', 'PTBP2', 'ANAPC15', 'TMEM145', 'RAB22A', 'KIF20B', 'KIF3C', 'GDF6', 'DNHD1', 'RNY5', 'SNX5', 'ZNF366', 'DCAF5', 'GLMN', 'GSTK1', 'DFNA5', 'GIMAP7', 'SEBOX', 'NPPC', 'SLC22A10', 'SQSTM1', 'PRDM14', 'C9ORF142', 'JAG1', 'FLG2', 'SLC34A3', 'CYMP', 'R3HDM1', 'FAM98C', 'SLC12A6', 'SEC1P', 'UBXN4', 'HYLS1', 'CYP1B1.AS1', 'CD177', 'DNAI1', 'TMEM140', 'DEFB115', 'ARL10', 'MED28', 'TIGD7', 'LURAP1L', 'C10ORF88', 'SCARNA12', 'SNAPIN', 'CST4', 'CPEB3', 'OLIG1', 'SNORD58C', 'HIST2H4A', 'ORC6', 'PROSER2', 'UBE2A', 'GUCY1B3', 'PGAP2', 'TEDDM1', 'FOXO1', 'GNMT', 'SNORA26', 'ARL13B', 'C2CD2', 'GTF2H4', 'SLC38A8', 'CLSTN3', 'PTPRU', 'GCKR', 'GDF10', 'E2F4', 'SLC7A6OS', 'NAP1L6', 'AKAP3', 'GFPT1', 'ZCCHC24', 'SNORD78', 'RBFA', 'TAF13', 'TMEM97', 'ADPRHL2', 'FTH1P3', 'OLR1', 'NAPSA', 'AP4S1', 'ALDH1A2', 'SMUG1', 'MRPL40', 'CFH', 'NUDT7', 'MRPS36', 'FAM81A', 'TM4SF1', 'SCAMP4', 'KIAA0125', 'KLK5', 'MT1M', 'FAM66C', 'MT1B', 'MEFV', 'CTHRC1', 'PHYHD1', 'LYPD3', 'AK2', 'NLN', 'MBTPS2', 'LYPD6B', 'SMAP1', 'UGT1A8', 'DUSP5P1', 'DPH3', 'MRPS15', 'ZNF98', 'C6ORF10', 'ATP13A5', 'CDC42BPG', 'BICC1', 'TMPRSS12', 'SASS6', 'TOR1B', 'PAQR8', 'KANK4', 'FOXQ1', 'POLE', 'LRRC14B', 'CEP170B', 'HIST1H2AA', 'PCDH15', 'LCE3A', 'OR4A16', 'HLA.DQA1', 'EIF4E', 'GPR20', 'CTAGE9', 'PRRT3', 'TUBB', 'KRCC1', 'TBC1D2', 'TRIM42', 'AGPAT4', 'CA4', 'EXOSC5', 'NOS1AP', 'JRK', 'DDIT3', 'HSPBAP1', 'MYOC', 'RBCK1', 'EGLN2', 'FBXL15', 'DEPTOR', 'CHP2', 'IL6ST', 'CDC42SE1', 'CDRT4', 'GLIPR1L1', 'MAP3K15', 'KRT39', 'SOCS5', 'MMADHC', 'PAAF1', 'PLCG2', 'SLC6A18', 'OR6C65', 'SBK2', 'SLC22A5', 'ADRA2C', 'VDAC3', 'SNORD116.1', 'SMIM15', 'CXCL8', 'KIT', 'ZFYVE9', 'LOC493754', 'MIF4GD', 'SFT2D3', 'MYOM3', 'GPR101', 'NAT8', 'OR8K5', 'ADAM15', 'PPP5C', 'GPR119', 'ACAD9', 'NPHS2', 'STAT1', 'LOC646214', 'TUBGCP2', 'OR2T6', 'RASGRF2', 'RTCA', 'TGIF2', 'FABP4', 'PCSK1N', 'ATP5J', 'OR2B3', 'VSIG1', 'LOC90246', 'FIBIN', 'CACTIN', 'CCT6P1', 'ZCWPW1', 'NUBPL', 'MEP1A', 'SMAGP', 'CDC16', 'RELT', 'ASAP1.IT1', 'CCDC28B', 'FAM184B', 'YBEY', 'SNORA78', 'TBC1D3P2', 'COLQ', 'ABCC2', 'ACTR3C', 'CYR61', 'GUSBP1', 'INPP4A', 'CERS4', 'MRE11A', 'LHX9', 'NPAS2', 'ASMTL.AS1', 'PIN1P1', 'COPRS', 'ZRANB3', 'KCNT2', 'SEMG2', 'DUSP27', 'FIGNL2', 'SBSN', 'DDX43', 'PSMG2', 'OR1A2', 'PATE3', 'CDC25B', 'NOLC1', 'HERPUD1', 'SNORD115.48', 'PPP1R3G', 'DVL2', 'VPS37A', 'ATP12A', 'DSTN', 'OGFRL1', 'ZCCHC3', 'CEACAM19', 'CSN1S1', 'GALNT1', 'SPSB4', 'OR6B3', 'SYCE2', 'CAPRIN2', 'PRIMPOL', 'GLYCTK', 'TBX4', 'ARSG', 'THUMPD1', 'NT5DC3', 'N4BP2L1', 'TAF10', 'NADSYN1', 'LZTR1', 'OSGIN1', 'STAM', 'WFDC11', 'GTF3C5', 'HIGD2A', 'SNORD51', 'COL6A6', 'ATG101', 'RPL31P11', 'SLC11A1', 'CYP4Z2P', 'KRI1', 'ABCB9', 'INADL', 'SH2B1', 'HEATR6', 'TMEFF2', 'FAM224B', 'PTGER1', 'ZNF826P', 'WDR54', 'SHH', 'COL18A1', 'SLC9A3R1', 'ACPT', 'GLTSCR2', 'ZNF814', 'GALK1', 'CRYM', 'KRTAP4.8', 'DKFZP434A062', 'MCTP2', 'APBA1', 'GOLGA6L9', 'VGLL4', 'RPS6KA4', 'MTG1', 'TMEM161B', 'RXFP1', 'SLC7A2', 'EIF4A2', 'VWA8', 'DCD', 'WWP2', 'LMTK3', 'IL20RB', 'DMRTC2', 'ANO8', 'NPY5R', 'HOXD10', 'EOGT', 'RAB3IL1', 'GOLM1', 'PRKX', 'NCAPH', 'TMEM45B', 'MSH2', 'PCDHGB2', 'NUP107', 'ATP1B3', 'IFNAR1', 'KCNMB2', 'AARS', 'THNSL2', 'SMYD3', 'HNRNPA2B1', 'ABCC10', 'PPP1R14D', 'PAPSS2', 'ANP32B', 'CENPU', 'KRTAP27.1', 'WDR60', 'GATS', 'DNAJC21', 'ARSA', 'SLC2A2', 'CA2', 'ARL8A', 'TIE1', 'FITM1', 'SNORA81', 'PSMD1', 'UBE2W', 'PIGQ', 'METTL10', 'CALCR', 'DAND5', 'DIP2A', 'AIMP2', 'CDH3', 'ATG5', 'NPDC1', 'ZGPAT', 'LILRA1', 'DMRTC1B', 'RSBN1L', 'UBL4A', 'RAD51AP1', 'TAB2', 'IL11', 'ZNF354A', 'IL9R', 'COL15A1', 'HIST1H4C', 'FANK1', 'OTOS', 'ETF1', 'ARL15', 'RPL22', 'CYP2B7P', 'CNOT7', 'CELSR2', 'SLC36A4', 'CLEC12A', 'NUTM2F', 'STXBP2', 'TUBA3C', 'OR5AC2', 'C7ORF49', 'PIK3IP1', 'CPLX1', 'HOXA6', 'CDIPT', 'SMCHD1', 'HCG18', 'TPPP3', 'TFIP11', 'SNORD111', 'GHDC', 'SUMF2', 'VAMP3', 'C5ORF38', 'CORT', 'SSFA2', 'GAGE1', 'ACSM4', 'MAPK4', 'CNPPD1', 'AP1B1', 'PMPCB', 'SNX4', 'TUBA1B', 'ABHD14A', 'LRIT2', 'SNORA21', 'GATA1', 'PLCH2', 'JUP', 'PDRG1', 'PDCD1LG2', 'HIST1H2BK', 'DHX34', 'FBXO22', 'RFXANK', 'RHEBL1', 'SKIDA1', 'CDHR5', 'PHYHIP', 'NUMA1', 'C10ORF95', 'NPTX1', 'DUS3L', 'BDP1', 'PCDHGA3', 'ZNF334', 'FOXD1', 'AATK.AS1', 'TCP10L2', 'CRYBA1', 'PLD1', 'PAH', 'OR13C4', 'MS4A7', 'RCCD1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.465941535738387 Spearman Correlation: 0.46841551489260924 Coefficient of Determination: -3.4798600404580737 RMSE: 0.7601366210724807 NRMSE: 0.37332970928367004 MAPE: 4812.475759233684 Pearson Correlation: 0.05465180443369065 Spearman Correlation: 0.08847097598861123 Coefficient of Determination: -1.1721890926754623e+26 RMSE: 4515753781585.314 NRMSE: 1688668841158.9905 MAPE: 6761247356340197.0 Predictor: ElasticNet Pearson Correlation: 0.35806507996666803 Spearman Correlation: 0.3810818144644895 Coefficient of Determination: 0.10810177759749562 RMSE: 0.3391697272802416 NRMSE: 0.16657812842210185 MAPE: 780.769172732219 Pearson Correlation: 0.18757017738375434 Spearman Correlation: 0.16642123520410348 Coefficient of Determination: 0.01730483412668926 RMSE: 0.4134669744707416 NRMSE: 0.15461622364891334 MAPE: 2088.7420334637736 Predictor: RandomForests Pearson Correlation: 0.392392142739742 Spearman Correlation: 0.39904277622636425 Coefficient of Determination: 0.10239367691252965 RMSE: 0.3402533303074177 NRMSE: 0.16711032380895716 MAPE: 480.87708953201985 Pearson Correlation: 0.1901263710024535 Spearman Correlation: 0.16595011396679252 Coefficient of Determination: 0.016083549508972617 RMSE: 0.41372382119219225 NRMSE: 0.15471227163479695 MAPE: 806.337498170309 Protein: CDH3 x_train_column_count: 75 x_train columns: ['ADIG', 'KIAA2018', 'TCAF1', 'ORAOV1', 'TEX2', 'P2RY8', 'ACKR1', 'EFHC2', 'TNXB', 'ITPR3', 'RNF17', 'VPS52', 'NEUROG2', 'FAM186A', 'DNAJB14', 'C12ORF10', 'WTAP', 'CLRN1.AS1', 'ABCA10', 'AP4M1', 'SMC2', 'PFDN2', 'NFIA', 'KCNE1', 'RNF168', 'HSFY2', 'SIVA1', 'ACBD6', 'TMEM19', 'SNORD77', 'MEIS1', 'RNF214', 'GPR1', 'PCDH10', 'GMCL1P1', 'PALB2', 'INE1', 'TMEM135', 'MYT1', 'YDJC', 'NKX1.2', 'SNORD114.8', 'TPGS2', 'SLC39A8', 'SLC5A4', 'DIMT1', 'ATAT1', 'RTN4RL1', 'SPRR1B', 'NINJ2', 'ARMT1', 'S1PR5', 'KARS', 'NGLY1', 'PERP', 'ECEL1', 'SH2B3', 'GPR6', 'CDC14B', 'SNORD30', 'WNT9A', 'TM6SF2', 'SGCE', 'LTF', 'ZNF69', 'NID2', 'CEBPA', 'MTRF1L', 'KRTAP10.6', 'FZD8', 'NBPF6', 'HNRNPR', 'FANCI', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.40023899916102995 Spearman Correlation: 0.40205621031527616 Coefficient of Determination: 0.16013925349983849 RMSE: 0.18674078295664506 NRMSE: 0.13101306544076238 MAPE: 680.461570741795 Pearson Correlation: 0.31182725602635797 Spearman Correlation: 0.34292989408008 Coefficient of Determination: 0.08053617718914408 RMSE: 0.2142077685060674 NRMSE: 0.19326028609611004 MAPE: 183.61998035395598 Predictor: ElasticNet Pearson Correlation: 0.33071386891050353 Spearman Correlation: 0.3491681914581108 Coefficient of Determination: 0.08072086500773779 RMSE: 0.19537061114584642 NRMSE: 0.13706755566723244 MAPE: 322.0423671797365 Pearson Correlation: 0.35376739526507156 Spearman Correlation: 0.36256813263141874 Coefficient of Determination: 0.07586935081149349 RMSE: 0.21475069644290076 NRMSE: 0.193750120844559 MAPE: 163.38609933993382 Predictor: RandomForests Pearson Correlation: 0.37380291312592273 Spearman Correlation: 0.36105297756540367 Coefficient of Determination: 0.10466194842595122 RMSE: 0.19280977803874205 NRMSE: 0.13527093368604567 MAPE: 344.4726314609607 Pearson Correlation: 0.28175898442324154 Spearman Correlation: 0.30217133547980884 Coefficient of Determination: 0.059835651242455934 RMSE: 0.21660565126283773 NRMSE: 0.19542367872575334 MAPE: 199.89800671789823 Protein: PTEN x_train_column_count: 886 x_train columns: ['CYP27C1', 'ZP3', 'HBS1L', 'VLDLR', 'HOXA13', 'CD38', 'GSTA3', 'SPSB1', 'ERMAP', 'TMEM116', 'CTAGE10P', 'FAM161A', 'GPX3', 'SNAP23', 'ZNF177', 'LRRC74A', 'NUP153', 'PIFO', 'METTL21A', 'HIST1H2BM', 'SAP30BP', 'TELO2', 'VASH2', 'ZMAT3', 'LMBR1', 'SRPK2', 'ZNF831', 'ZNF770', 'EEF1B2', 'ZNF320', 'C20ORF141', 'RNU6ATAC', 'ZMYM2', 'SLC7A10', 'WNT5B', 'SNTA1', 'LOC401463', 'GRAMD1B', 'IGLL1', 'PPP1R10', 'KCNMB1', 'BLNK', 'SART3', 'LINC00628', 'IFT122', 'IFNGR1', 'FAM27L', 'EMILIN2', 'CNTNAP5', 'CACNG4', 'PLEKHB2', 'C1ORF53', 'TRNT1', 'SLC22A12', 'VPS33A', 'R3HDM2', 'AIFM1', 'GUCY1A3', 'CPNE8', 'DUX4L6', 'GAS7', 'CNNM2', 'PWWP2A', 'RHOT2', 'SERPINB3', 'C9ORF16', 'AKNA', 'PCSK2', 'COL6A3', 'FOXQ1', 'CDH11', 'LAMB2', 'TMEM91', 'POMK', 'ANKRD13A', 'CYSTM1', 'CCDC25', 'ANAPC10', 'LINC00518', 'GBGT1', 'TCP10L', 'RASA3', 'PLCZ1', 'SPEG', 'POLB', 'RNF115', 'ATAD3C', 'FAM173A', 'C12ORF74', 'BMS1P6', 'ARF3', 'TARM1', 'ACTL8', 'CFL2', 'ZRSR2', 'RBFOX2', 'BRI3', 'HMGB3P1', 'PNPLA1', 'DLGAP2', 'FRAT2', 'CARD11', 'TCF3', 'FAM189B', 'SPON1', 'CACNG5', 'RFX3', 'VCX3B', 'LINC00893', 'ZNF700', 'OR4K14', 'UBE2D4', 'TEKT5', 'HIST1H3F', 'PRKCD', 'ZNF311', 'RNF5', 'OR5H15', 'DDX3X', 'E2F3', 'MTL5', 'BTN3A2', 'CRIPT', 'RPL7A', 'SYT4', 'TLE6', 'GLT1D1', 'SLC30A8', 'SUSD2', 'FUT5', 'IHH', 'TENM4', 'OR1M1', 'C20ORF202', 'TMEM50B', 'LCE1B', 'BTBD6', 'SPX', 'PTRHD1', 'SUGCT', 'TJP3', 'ZNRD1.AS1', 'XKRY', 'HGSNAT', 'ARL17A', 'ANAPC7', 'ALDH16A1', 'DIP2A', 'PROSER2', 'C19ORF54', 'TAAR1', 'BRWD1', 'BCL2L1', 'CTSS', 'ARF5', 'TRIM33', 'ACTR2', 'GULP1', 'SLC22A24', 'PTPRA', 'PTCHD3', 'FBF1', 'KIAA0930', 'TMPRSS4', 'NOMO2', 'HES5', 'CLDN16', 'C19ORF66', 'DSCR9', 'RNF4', 'RNF144B', 'CEP162', 'TACSTD2', 'FAHD1', 'PIWIL2', 'ITPR2', 'SYT1', 'SNORD56B', 'DEC1', 'C21ORF91', 'DHX35', 'SNORA15', 'ZNF512', 'CDON', 'DDX24', 'SUPT20H', 'HACD2', 'AATBC', 'EVA1B', 'SLC25A53', 'PLCXD3', 'NRSN2', 'SWSAP1', 'NHLH2', 'EXOSC7', 'DUSP9', 'ABCA9', 'RASA4CP', 'RNF130', 'ZNF90', 'RPP21', 'OR8U1', 'FAR2', 'DTX1', 'GK', 'TK2', 'LINC01548', 'DHRS7', 'AKAP8L', 'SH2D5', 'TIMM13', 'CCDC24', 'CABIN1', 'SV2B', 'AFP', 'MAP1A', 'TTC37', 'AMT', 'FAM53A', 'TRDN', 'CEP44', 'OR2W3', 'TERT', 'MTMR14', 'RMDN3', 'TNNT3', 'MPC1', 'DPP7', 'OLIG1', 'MRPL46', 'ZNHIT6', 'PPP1R27', 'LOC646471', 'DSC1', 'C2ORF73', 'NEGR1', 'B3GNT2', 'CENPA', 'RCCD1', 'CCKAR', 'CXORF66', 'NFYB', 'HPYR1', 'SUFU', 'RDH13', 'CMAHP', 'KRTAP11.1', 'DSCR8', 'KLK6', 'CXORF40A', 'TMEM14C', 'COX19', 'EP400', 'GNG5', 'C2ORF44', 'SPACA6P', 'OTOR', 'SCN2B', 'LIN9', 'MSX2', 'SPATA33', 'SMCR5', 'PIEZO1', 'SGOL2', 'TIMM10B', 'MBLAC2', 'NKX2.5', 'STATH', 'HTR1D', 'INTU', 'BCAR3', 'GINS1', 'TTC23L', 'TSGA10', 'IL13RA1', 'RANBP3', 'OGDH', 'USH2A', 'NFIB', 'GSTK1', 'POLE2', 'ROPN1L', 'ADAMTS2', 'ADIPOR1', 'MPDZ', 'TMEM17', 'SLC25A48', 'METTL2B', 'RPL19', 'LCE1E', 'USP17L2', 'MYCL', 'SNAR.I', 'CAPNS1', 'SNORA74A', 'PAXIP1.AS2', 'TMEM79', 'CMC2', 'KCTD2', 'MYADM', 'UBE2Z', 'DUSP3', 'RPS6KA6', 'FAM102A', 'DNAJB6', 'UGDH', 'PDILT', 'SNORD113.2', 'SIAE', 'DEFB121', 'CCDC112', 'LINC00982', 'CNOT1', 'OR10Q1', 'OR5B21', 'ZNF592', 'FOXL1', 'PCDHGB8P', 'CHP2', 'EPB41', 'PCF11', 'SNORD115.9', 'PCP4', 'SSR4', 'TNFRSF10A', 'FRG1', 'DNAH3', 'NAT8B', 'FAM183CP', 'CALHM2', 'ARID1A', 'CDH20', 'ICOS', 'TRMT13', 'ATG7', 'AP2M1', 'RFPL1S', 'BOLL', 'HOXC9', 'KCNH6', 'DNAJC22', 'PRAMEF11', 'SC5D', 'TMEM47', 'CHN1', 'DUX4L1', 'DEF8', 'HORMAD1', 'ANKRD30BL', 'SHISA3', 'PSMD3', 'ARL10', 'MAN2B2', 'TFAMP1', 'AP1S3', 'TCP10', 'NR4A2', 'LOC220729', 'HLA.DMB', 'DMTF1', 'ZNF765', 'PGAP2', 'CFH', 'BLOC1S5', 'TAAR2', 'CASD1', 'PQBP1', 'C1QB', 'C3ORF79', 'PLEKHH1', 'TMTC1', 'RLF', 'COLGALT2', 'EAF2', 'FGD4', 'ANKS4B', 'DYDC2', 'PTX4', 'RAB6A', 'ARHGAP33', 'ERH', 'ADAMTS15', 'C1ORF186', 'DTX2P1.UPK3BP1.PMS2P11', 'ADI1', 'ARMC10', 'HBZ', 'SLC16A11', 'LACTB', 'UGP2', 'SNORD116.10', 'DNA2', 'ZG16', 'ZBTB7B', 'BREA2', 'C6ORF10', 'LRRC40', 'IP6K3', 'SSX3', 'HOMER3', 'CRCT1', 'UBE2Q2P1', 'BACH1', 'LILRA4', 'FNDC5', 'IRF8', 'MRPS7', 'RPTOR', 'TNFSF4', 'PCBP2', 'ISCA1', 'FBXO41', 'TBC1D23', 'TEAD1', 'APBB2', 'SNORA11', 'SELO', 'DLG1', 'RNF148', 'JAKMIP2', 'TMEM25', 'ACOT4', 'ZNF532', 'T', 'DSCAM', 'AP2A1', 'SLC43A3', 'DYNLRB1', 'CETN1', 'CYP46A1', 'EN1', 'ZFP64', 'TSPAN3', 'LAMA1', 'ZP4', 'CCDC57', 'SLC7A8', 'TMLHE', 'CCM2', 'PCDHB7', 'PRR32', 'SNAI2', 'TTTY17A', 'AURKAIP1', 'UG0898H09', 'LRRFIP2', 'REG4', 'INTS10', 'PUS7L', 'HOXB6', 'APOL4', 'KCTD18', 'NR1I2', 'SLC26A4.AS1', 'KLRD1', 'CEP41', 'LINC00669', 'WDR63', 'LAX1', 'CCR4', 'SSTR4', 'LINC00152', 'TUBAL3', 'SERPINE1', 'STRN', 'RXFP2', 'SOWAHD', 'ADCK4', 'SLC2A9', 'EXPH5', 'OR4X2', 'CRMP1', 'BOD1L1', 'MARVELD1', 'ZSCAN23', 'ABCG2', 'MKRN3', 'PNMA5', 'HIGD2A', 'ANKRD32', 'SNORD115.45', 'MAGEB18', 'TSPAN2', 'ASB12', 'EIF3C', 'TM6SF1', 'USP48', 'MBP', 'MSR1', 'CACNA2D4', 'SMNDC1', 'DAPK2', 'SOCS2', 'PTPN11', 'ALG3', 'PABPN1', 'PAK1', 'HIST1H3E', 'PRDX3', 'C7ORF49', 'C15ORF57', 'STAU2', 'ACTL9', 'HLA.DQA1', 'TPM2', 'OR10G9', 'SLC30A7', 'SMIM7', 'MEG8', 'TRPS1', 'AGPAT2', 'IGFL1', 'MANEAL', 'HMBOX1', 'CSRNP2', 'NT5C1A', 'UGGT2', 'OCLM', 'AARS', 'SNX15', 'MT1L', 'MAU2', 'GALNT15', 'CRIP3', 'OTC', 'SLC45A4', 'CDK10', 'TARBP2', 'RASA2', 'LOC727896', 'PRPF38A', 'CENPP', 'PIK3C3', 'SLC22A25', 'TGFBRAP1', 'SEL1L2', 'PPRC1', 'NLRP5', 'DPP4', 'KIF1A', 'NUFIP1', 'DACT2', 'NDUFS2', 'DNMT3L', 'ZZZ3', 'C7ORF66', 'LINC00523', 'PPP1R11', 'TSPO', 'FKBP6', 'EEF1A1', 'RHOBTB3', 'FAM214A', 'ARHGEF2', 'STRBP', 'SPATA31D5P', 'SNORD62A', 'CMTR2', 'WSB1', 'KRTAP9.8', 'KCTD20', 'SUN1', 'TMEM59', 'THEM4', 'KCNA7', 'ZNF576', 'IRX2', 'ERCC6', 'ZP2', 'UBA6', 'A1CF', 'TRAT1', 'TP53', 'C9ORF85', 'ZNF518B', 'SLC43A2', 'BTBD8', 'MROH5', 'TSSC4', 'RNASE11', 'PYGM', 'WFDC10A', 'C7ORF61', 'ZNF92', 'PRDX6', 'F2', 'TACO1', 'OR7E156P', 'TMEM183A', 'QSOX2', 'MUC2', 'SMAD6', 'CRIP2', 'UCHL5', 'VWCE', 'RPS9', 'C9ORF153', 'ATP13A3', 'CPSF3L', 'ACTRT2', 'DCLK1', 'ADAM18', 'GALNT13', 'ZNF853', 'C15ORF61', 'PADI2', 'FGB', 'HOXB13', 'KRTAP19.6', 'TDRD5', 'TMEM18', 'IGF2', 'PDCL', 'CAV3', 'CHM', 'UNK', 'OR10X1', 'SFSWAP', 'GPR183', 'TRAM2', 'SNORD88A', 'COTL1', 'BTN2A2', 'TSHB', 'PCAT4', 'SPEF1', 'DNHD1', 'PRPF31', 'PFAS', 'MEX3D', 'XRCC6BP1', 'MAX', 'POM121', 'MAGEA6', 'NUMB', 'PTK6', 'IARS2', 'FBRSL1', 'POR', 'C6ORF48', 'ZNF687', 'MAGEB10', 'SMIM11', 'RNF113B', 'PDPK1', 'ANKDD1A', 'OOEP', 'SPACA3', 'CSN1S1', 'ATP1B1', 'GATA3', 'IDO1', 'TRAP1', 'EPHA6', 'CCBL1', 'GLS', 'PRSS55', 'EFHD2', 'GBP7', 'IFI27', 'MED11', 'FUT10', 'LRFN2', 'NDUFA10', 'OSGEP', 'QTRT1', 'MMP8', 'BACE2', 'CMTM8', 'FUNDC2', 'TRAPPC6B', 'RGN', 'NCAPD3', 'IFRD1', 'NUFIP2', 'LYN', 'BRD8', 'SHFM1', 'ARX', 'DCAF16', 'FCER1G', 'GYPB', 'OR2G3', 'LARS2', 'NUTM2F', 'DFFA', 'ITPKC', 'OR51S1', 'LUC7L3', 'MAP3K15', 'PIM1', 'TLN1', 'C1ORF123', 'DENND5B', 'XYLT2', 'SFRP5', 'CYP4Z1', 'MCTP1', 'HELT', 'GTF2E2', 'ZNF385B', 'LMF1', 'KLHL32', 'OPALIN', 'KRTCAP2', 'CELF4', 'DPM2', 'NEUROD6', 'CAMK2A', 'MUT', 'CACNB4', 'RAB3B', 'HPGDS', 'PDXDC2P', 'RPL35', 'SLC25A5', 'PCSK7', 'SNORD19B', 'GRB10', 'LPA', 'MPZL1', 'SPAG6', 'ARGFX', 'OR2Y1', 'CEMIP', 'EZH1', 'CD9', 'GAGE2B', 'NFATC2IP', 'C2ORF69', 'OR5AU1', 'PPIAL4E', 'TCAF2', 'PCYT2', 'WNK1', 'GOLGA8CP', 'SDHAF2', 'F8', 'MAGEA3', 'RABEP1', 'CT47A9', 'MSI1', 'NEURL1B', 'TRIM47', 'PRPF4B', 'DOCK3', 'ISM2', 'ZNF704', 'ZNF746', 'FKBP1A', 'RPL19P12', 'GPR107', 'OLFML2B', 'UTP18', 'ITPK1.AS1', 'SDHAP1', 'PTPN5', 'SLC7A3', 'CYP4B1', 'CECR5', 'CYP7B1', 'RRN3P1', 'IFT88', 'MIA3', 'KCNQ1OT1', 'CD3D', 'TMED10P1', 'MFSD7', 'PTGDR', 'LRIF1', 'TBC1D13', 'ICAM3', 'PIH1D2', 'ALG14', 'SNORD59B', 'LIMS3', 'IKZF2', 'TMC6', 'FABP6', 'LIG3', 'CSF3R', 'TCEB3C', 'TANK', 'LHX9', 'ANKRD50', 'TIMM17A', 'NKX6.3', 'SPRYD4', 'TXNDC15', 'LINC00471', 'MYO9A', 'CLDN20', 'LRRC71', 'SUDS3', 'SDHAF3', 'WTIP', 'TIAM1', 'B3GNT3', 'PGBD4', 'PTER', 'ARFGEF1', 'GBP6', 'CD248', 'CAB39', 'RER1', 'DEPDC7', 'GJA10', 'APOBR', 'SUZ12P1', 'GRPEL2', 'SEPT8', 'RFX7', 'TTC9C', 'WASH3P', 'SNORD46', 'CSTF1', 'OR4E2', 'DNAJB7', 'CLDN2', 'KLHDC8A', 'PPP1R9B', 'MCHR2', 'PPIL4', 'ZMAT2', 'UTP20', 'CYP21A2', 'SH3BGRL', 'OR52H1', 'GRAMD2', 'SRRM2', 'ZNF542P', 'SH3YL1', 'CTU1', 'ERBB2', 'CCNL2', 'ST3GAL3', 'MRPS35', 'RAB35', 'DMC1', 'SBDS', 'HERC3', 'RFC3', 'LRMP', 'OXTR', 'CTLA4', 'ULK2', 'PTCD1', 'KDM2B', 'COL8A1', 'CASK', 'TEX28', 'MAGED1', 'SPATA2', 'EVA1C', 'DHX38', 'GGT5', 'TMEM233', 'POTEE', 'KRTAP19.8', 'TMSB10', 'SOD3', 'NES', 'DAGLB', 'RPLP0P2', 'TTTY2', 'KLF14', 'CRLS1', 'SNX24', 'ODC1', 'C22ORF31', 'RPL9', 'WNK4', 'RNMTL1', 'FGFR2', 'TDGF1P3', 'ZNF432', 'FRY', 'LOC100129550', 'HNRNPL', 'C6ORF106', 'REL', 'OR1I1', 'ZPLD1', 'IQSEC3', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 0.8211550410188758 Spearman Correlation: 0.7415481398967557 Coefficient of Determination: 0.6742550704626012 RMSE: 0.32476718823856865 NRMSE: 0.050780578256362854 MAPE: 429.18813051785173 Pearson Correlation: -0.10926661987327342 Spearman Correlation: 0.18210474208513278 Coefficient of Determination: -3.763683457847824e+20 RMSE: 14001223257.738436 NRMSE: 2708376519.989639 MAPE: 1359210425214.789 Predictor: ElasticNet Pearson Correlation: 0.5475698970473618 Spearman Correlation: 0.501654061440685 Coefficient of Determination: 0.23938223828919525 RMSE: 0.4962683111135136 NRMSE: 0.0775964836390452 MAPE: 531.2343282472646 Pearson Correlation: 0.3745916564372025 Spearman Correlation: 0.4131697402710758 Coefficient of Determination: 0.11339421793574123 RMSE: 0.6795551611641647 NRMSE: 0.1314521744746527 MAPE: 775.9091840178929 Predictor: RandomForests Pearson Correlation: 0.5160923544794217 Spearman Correlation: 0.42050479467729346 Coefficient of Determination: 0.1544736427162593 RMSE: 0.5232351221023486 NRMSE: 0.08181301260297844 MAPE: 368.84523515241267 Pearson Correlation: 0.3427880061010433 Spearman Correlation: 0.43667626778388763 Coefficient of Determination: 0.055090464675502604 RMSE: 0.7015434132490588 NRMSE: 0.1357055503808919 MAPE: 476.2812152380598 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['FAM71E1', 'TRAF3', 'MUC5B', 'SNORA28', 'LYRM7', 'TBATA', 'MRGPRE', 'AADACL2', 'EIF1AX', 'TTC19', 'TINAGL1', 'NFXL1', 'PABPC1L2B', 'SNORA34', 'CCDC60', 'INTS7', 'TAF1L', 'OR1A2', 'FANCA', 'DUSP2', 'SEMA3B', 'C4ORF29', 'AGO1', 'C14ORF37', 'HIST2H3D', 'CDC42EP4', 'MTHFD1L', 'ZSCAN12P1', 'CDKN3', 'CFAP126', 'CD200', 'TTC39A', 'GOLGA3', 'C2ORF40', 'DSG3', 'MAPK11', 'SUOX', 'TOB2P1', 'RPS14', 'TMEM223', 'PIK3AP1', 'NF1', 'DHX15', 'STYK1', 'DNAL4', 'FAM167A', 'TMEM125', 'PCBP4', 'INTS4P1', 'CORO1C', 'IGSF11', 'CDC73', 'WRNIP1', 'CD244', 'LOC399815', 'KIAA0408', 'KLHDC8B', 'MGAT5', 'KRT12', 'SLC4A3', 'P2RX6', 'SNAR.E', 'ETAA1', 'DNAJA4', 'USP22', 'GDF7', 'PPP1R3F', 'ICA1L', 'BMI1', 'SERPINA3', 'LINC01001', 'RTN4RL1', 'DYSF', 'COG2', 'SMPDL3A', 'CCL7', 'TTC38', 'COL5A1', 'SNX13', 'ACYP2', 'FAF2', 'DNAAF3', 'SSX9', 'IGFL4', 'BCAS3', 'TCF15', 'RASA4', 'FAM41C', 'SNORD114.18', 'ZAR1L', 'IL4', 'NDRG2', 'CHGA', 'ADCY7', 'DEFB110', 'SNORD115.48', 'RBBP5', 'PTGER3', 'LOC100133331', 'ZNF48', 'ALG3', 'RPS26P11', 'C14ORF1', 'LINC00488', 'LINC00176', 'SAV1', 'ENKD1', 'OXSM', 'ITFG1', 'GAB3', 'MITF', 'MC1R', 'XPNPEP2', 'PWP2', 'ZNF257', 'WTIP', 'MSANTD3', 'PRAMEF22', 'GALR1', 'METTL23', 'EIF1AD', 'TKTL2', 'RBMY1B', 'EPHA8', 'RAD54B', 'TLR3', 'MFSD8', 'ARHGAP21', 'CES4A', 'NCR2', 'MAPK8IP1', 'CPLX2', 'PPP4R2', 'FURIN', 'SMIM7', 'SNORD45A', 'FLNB', 'TPBG', 'SLC6A17', 'RMI1', 'PRAMEF8', 'SLC35G2', 'CCDC85A', 'AASDHPPT', 'OR51B5', 'SH2B2', 'DUSP14', 'GPR19', 'OCM2', 'BTF3P11', 'CD300A', 'F2', 'SUGT1', 'GDAP2', 'CCDC181', 'LRRC1', 'SCN4A', 'MTCP1', 'TMEM218', 'POMGNT2', 'PRDM11', 'EGR1', 'ZNF83', 'KRT8P41', 'EGF', 'CUL2', 'ADGRF4', 'AMICA1', 'SLC30A2', 'ITIH2', 'BAG5', 'STAM2', 'SI', 'TARSL2', 'P2RY4', 'SEPT7P2', 'CT47B1', 'FAM43A', 'NDUFA13', 'CYBRD1', 'TPM1', 'DBI', 'SNORA38', 'TCAP', 'GPAM', 'ADAMDEC1', 'ST3GAL1', 'HIBCH', 'TPI1', 'SNORD59A', 'KRT222', 'TREML4', 'UBQLNL', 'DYNC1LI1', 'CARD16', 'MAF', 'RBBP4', 'CLN8', 'ZNF263', 'UTP6', 'ZNF285', 'SLFN13', 'SNORD9', 'LINC00998', 'C9ORF156', 'ABCA12', 'GEMIN5', 'CLDN1', 'LTA4H', 'CX3CR1', 'HCFC1R1', 'HMCES', 'FGD5', 'ALS2CR11', 'BCCIP', 'SCARA3', 'SMNDC1', 'CPEB3', 'PCOLCE', 'MAGEE1', 'TMEM207', 'PEX10', 'ATP6V1C1', 'UBAC1', 'CUEDC2', 'SMOC1', 'GAGE1', 'LOC100133920', 'GUSBP2', 'SLC35A5', 'PCDHGC4', 'LRIT1', 'CMTM4', 'SCGB1A1', 'IL22', 'BACH1', 'FOXO3', 'METTL11B', 'PDP2', 'CRYZL1', 'FAM212A', 'ROM1', 'NPHP1', 'G2E3', 'UNC93B1', 'ZNF687', 'DOK5', 'TTI2', 'SLC39A13', 'TSPAN6', 'CD68', 'PAK1', 'YBX2', 'NUPL1', 'RFPL3', 'TBPL2', 'DISC2', 'NINL', 'MRPL23', 'FOXL2NB', 'ZBTB10', 'LOC148696', 'ZNF236', 'STEAP1B', 'USP14', 'TIMM44', 'ITM2B', 'GAL', 'TINAG', 'OR1K1', 'PITHD1', 'SKINTL', 'WNT9A', 'CIAPIN1', 'SH3RF1', 'RANBP10', 'TPP2', 'MTFMT', 'METTL1', 'EYA1', 'ACSL1', 'ADM', 'NRIP1', 'COA3', 'LHX5', 'ELN', 'ZNF90', 'CRNN', 'STX10', 'PADI1', 'CYFIP2', 'PCIF1', 'NXF2', 'RPL12', 'CNTN4', 'PIGM', 'SPINK14', 'PLOD1', 'CNTRL', 'MARCH6', 'MCM2', 'SCOC', 'CDCA5', 'BCORP1', 'CP', 'LINC00917', 'YAF2', 'C8ORF82', 'CRELD1', 'PCDH15', 'TMX3', 'WNT8A', 'CCNH', 'MFSD4', 'FAM65A', 'RBM4', 'MPV17L', 'HIAT1', 'HPSE', 'C9ORF47', 'MGC16275', 'TEAD4', 'C9ORF171', 'DCBLD1', 'OSCAR', 'GPM6B', 'IL1RL1', 'NLRP6', 'HSCB', 'SLC2A14', 'SLC12A8', 'PDE9A', 'SLC4A2', 'NTN4', 'FIZ1', 'OR13C2', 'KLHL42', 'ZNF600', 'WDR37', 'FAM58BP', 'RSU1P2', 'SIRT6', 'NDUFB1', 'DDX20', 'ATG9B', 'MARCH9', 'NOL4L', 'TOPAZ1', 'SFPQ', 'KANK2', 'MED22', 'TMEM88', 'WNT2', 'PCDHA11', 'TMED5', 'CKS1B', 'GAB2', 'ZNF324', 'UGT3A1', 'BSPRY', 'ATG16L2', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.5035416523677897 Spearman Correlation: 0.46671923595638964 Coefficient of Determination: 0.08431676080296535 RMSE: 0.19183070599364951 NRMSE: 0.12358235206548528 MAPE: 382.7246075151122 Pearson Correlation: -0.06740798794544643 Spearman Correlation: 0.0007357645215187407 Coefficient of Determination: -1.6688865126672166e+25 RMSE: 678501002275.369 NRMSE: 887335385176.7069 MAPE: 136164566746306.3 Predictor: ElasticNet Pearson Correlation: 0.284085671670197 Spearman Correlation: 0.2603199871716914 Coefficient of Determination: 0.04107199869197564 RMSE: 0.19630822351557992 NRMSE: 0.12646688582095664 MAPE: 117.97696616768319 Pearson Correlation: 0.10698123182932212 Spearman Correlation: 0.11013437369689895 Coefficient of Determination: -0.06214659836642311 RMSE: 0.17117065888134525 NRMSE: 0.22385491254998396 MAPE: 118.92340717150825 Predictor: RandomForests Pearson Correlation: 0.44491072694542916 Spearman Correlation: 0.37610817918773165 Coefficient of Determination: 0.08412290662361921 RMSE: 0.19185101062221954 NRMSE: 0.1235954328376354 MAPE: 117.03164245702766 Pearson Correlation: 0.08608010378658068 Spearman Correlation: 0.13912909029935167 Coefficient of Determination: -0.07097648540460977 RMSE: 0.17188067827833498 NRMSE: 0.2247834673096645 MAPE: 119.25504805916705 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['GPR87', 'C20ORF195', 'TRPS1', 'ALDH5A1', 'PDCL', 'COPS4', 'LUZP1', 'SIAH3', 'SIL1', 'ALAD', 'BCL9', 'ABCA8', 'C4ORF33', 'ALX1', 'C11ORF80', 'GTF2H3', 'PVR', 'SIN3A', 'C16ORF82', 'KCNQ3', 'EHD1', 'GRM6', 'GTF3A', 'VBP1', 'SRCIN1', 'RFNG', 'GPANK1', 'CALCRL', 'CACNG3', 'PLA2G5', 'OR2W1', 'SYT6', 'GRM3', 'SLC9A1', 'MKI67', 'ARSJ', 'SLC25A5.AS1', 'FGD2', 'GOLGA6L5P', 'ZNF99', 'DMRT2', 'GNAS.AS1', 'PQLC2', 'USP2', 'NPHS1', 'OR51B6', 'GJA1', 'MYH2', 'SOX13', 'HDAC10', 'ATP6V1G2', 'MYO18B', 'ZBTB42', 'MS4A2', 'SH3D19', 'EIF4E1B', 'ETV3', 'LRRFIP1', 'DIP2B', 'NCSTN', 'MTMR8', 'DMRT3', 'RPL18A', 'KLHL2', 'TUBD1', 'FTHL17', 'ACVR2B.AS1', 'PTGES2', 'CAPN12', 'USP18', 'SLC27A4', 'TAS2R30', 'S100A16', 'ZNF740', 'SLC2A7', 'TLE6', 'RPLP0P2', 'RIPK4', 'OR2D2', 'IL6', 'COL1A1', 'JAM2', 'LOC100270804', 'SHC1', 'MYOT', 'TRUB1', 'ORMDL2', 'CLLU1', 'ICAM3', 'MYCNOS', 'ZMYM6', 'VN1R1', 'TDO2', 'PTCH2', 'WWC1', 'PARP14', 'CCDC129', 'MS4A6A', 'EYA3', 'DNAH8', 'NF1P2', 'NSUN6', 'DUOX1', 'HCG9', 'KBTBD6', 'GRIP2', 'LRIG3', 'BPNT1', 'KCNN4', 'COL7A1', 'WIBG', 'TRMT112', 'TMEM181', 'METTL21C', 'OR2C1', 'SEC63', 'KIAA1671', 'CDRT15', 'LSM14A', 'PDE1C', 'APOC3', 'NIPSNAP1', 'FANCL', 'ZNF578', 'TAF9B', 'PAFAH1B3', 'ZFYVE21', 'BRD7P3', 'TCAF1', 'RRM2', 'TRIM29', 'FAM72A', 'LMNB1', 'CTAGE10P', 'ZZZ3', 'TFCP2', 'SOS1', 'BCAS1', 'SCARB2', 'LINC00593', 'ALG1L2', 'SLC47A2', 'BCRP3', 'SQRDL', 'EXOC1', 'TRPC4AP', 'MANF', 'CYLC1', 'NDRG2', 'MRPL11', 'FAM167A', 'STK24', 'ATL2', 'EIF4EBP1', 'AGR3', 'CIB1', 'LINC00623', 'C16ORF90', 'MACROD1', 'AKR7L', 'CYP3A5', 'CCDC186', 'SNORD4A', 'PPOX', 'ZC3H12B', 'PIP5K1P1', 'XPR1', 'NPR3', 'PLGLA', 'FBXW8', 'TAS2R5', 'STX1B', 'TOP1P1', 'ARHGAP25', 'SMG8', 'ACOT1', 'COMMD4', 'TAP1', 'SMC2', 'PLP2', 'CYB561A3', 'SPDYE4', 'SMAGP', 'PPBP', 'CLDN23', 'PSAPL1', 'POTEC', 'OR6A2', 'ALG11', 'RAB3IP', 'CD163L1', 'TAS2R43', 'MSH5', 'ARL16', 'TTTY18', 'FSCB', 'UCP1', 'LEP', 'FMNL3', 'PRDM15', 'SLC27A6', 'TMEM170B', 'FARP2', 'PPP3CA', 'CAMK2N1', 'LINC01341', 'FCRL3', 'FRRS1', 'ZBTB16', 'BCLAF1', 'SNORD116.1', 'ZSWIM7', 'DNAJC22', 'TIGIT', 'C4ORF19', 'ZNF84', 'LRRC20', 'SEC23B', 'ELK3', 'C17ORF98', 'BACE2', 'USP32', 'TRAPPC2', 'HMP19', 'DNAJC21', 'CEP41', 'OR8J1', 'PNO1', 'ZSWIM8', 'C15ORF56', 'MAGEA3', 'LIG4', 'EXOC4', 'CMAS', 'ZNF569', 'ATP6V0E2.AS1', 'OR5AK2', 'CDC42EP5', 'LCE3E', 'NAT6', 'ALG12', 'TAS2R60', 'UBALD1', 'TTTY9B', 'C21ORF2', 'ZFP64', 'RDH16', 'WNT8A', 'ZNF433', 'ZIM3', 'LOC440461', 'LIN28B', 'AGK', 'SLK', 'OR2T10', 'ZMAT3', 'ZNF416', 'EDA', 'PRSS41', 'OCRL', 'VCP', 'CCDC137', 'SAMD1', 'UGT2B7', 'WDR24', 'LINC00483', 'NADSYN1', 'HOXD8', 'SSB', 'HPDL', 'PRR20B', 'RPL13AP17', 'RFTN2', 'CIAPIN1', 'LINC00471', 'LINC01102', 'MAGEC1', 'ZNF560', 'NCBP2.AS2', 'GLE1', 'TMEM30C', 'MCM6', 'SLC9A8', 'GATB', 'PCOLCE2', 'SSX4', 'LOC400043', 'TFG', 'GNB1', 'EPB41L2', 'HIST2H3C', 'RHOA', 'TXLNGY', 'SSH2', 'SNORD17', 'SYCP2L', 'RNF150', 'MS4A14', 'CAND1', 'TRIM14', 'C2CD4B', 'DUSP6', 'UBE3B', 'ABCC10', 'ARMC5', 'ADAM6', 'STAU2', 'PPP2R1A', 'OR2A14', 'MMEL1', 'CBX3', 'YAF2', 'PTAR1', 'SORBS1', 'DHFR', 'LEF1', 'TIMM21', 'XG', 'GRK5', 'GZF1', 'HAUS6', 'FUNDC1', 'FERD3L', 'MIEN1', 'WDFY4', 'SFT2D1', 'SNORD45B', 'PPP4R1', 'YWHAH', 'CEP72', 'DOPEY1', 'VWF', 'ACTL7A', 'BTG4', 'TYW1', 'OR10R2', 'TACC2', 'FCMR', 'ELP5', 'LINC00319', 'PCDHB7', 'C2ORF48', 'PLCB2', 'ASTL', 'DCTN1', 'GPR176', 'SNORD36A', 'PPBPP2', 'OGG1', 'CD163', 'ACMSD', 'TAMM41', 'MKNK2', 'KLK9', 'SERPINB7', 'SRSF2', 'TMEM187', 'OR5AN1', 'ZNRD1.AS1', 'TRANK1', 'ZNF689', 'IRGQ', 'SMIM14', 'PRICKLE3', 'XAF1', 'KIAA0408', 'LOC256880', 'ZNF788', 'SRP54', 'GTF2IRD1P1', 'RPL23AP53', 'DDT', 'VGLL4', 'TRIM37', 'ITGA11', 'TANGO2', 'RARA', 'HAS1', 'STK38L', 'HSPE1', 'SGPP1', 'LRRC4C', 'ATMIN', 'DOCK1', 'C14ORF28', 'PSMD11', 'CHST10', 'ACER2', 'DICER1.AS1', 'HRH1', 'ITGAL', 'PMP2', 'CD63', 'IL10', 'ZDHHC4', 'FXN', 'MBOAT2', 'AGTPBP1', 'EPO', 'CALML5', 'CETN4P', 'MBNL3', 'FBRS', 'SCGB1D1', 'DNM1P46', 'CASC5', 'CCDC153', 'RNF168', 'ACVR1', 'CYFIP2', 'ARHGEF15', 'PIK3C3', 'TMEM5', 'GGH', 'NCKAP1', 'OST4', 'BTN3A2', 'VCX', 'AATK', 'NDP', 'TPCN2', 'PEBP4', 'PGM5', 'CABLES1', 'BPIFB3', 'CLDN19', 'KLLN', 'EMILIN3', 'ZNF347', 'SRRT', 'NELFB', 'ADGRE4P', 'SMAP2', 'ILKAP', 'JDP2', 'PDE7B', 'RBM25', 'CPT1C', 'CHURC1', 'BRK1', 'SYNDIG1', 'CFL1P1', 'TSC22D3', 'SUV420H1', 'BCAR4', 'IGIP', 'ZAK', 'CASC2', 'IZUMO2', 'SPAM1', 'FBXO24', 'C11ORF49', 'MYCN', 'C5AR2', 'VPS26A', 'SEPT9', 'COG4', 'BRF2', 'ANKRD33', 'ARHGEF10L', 'OR10A4', 'MOV10L1', 'C9ORF57', 'HFE', 'NPAS1', 'PKD1', 'OSTC', 'KLHL36', 'CXCL8', 'CITED1', 'STRA8', 'EPHX2', 'SPTAN1', 'PHF21B', 'KRTAP10.4', 'ETFA', 'OR5B12', 'KLHDC9', 'LEUTX', 'UHRF1BP1', 'ZSCAN5B', 'COL4A6', 'IFITM1', 'CCR6', 'YWHAB', 'MTIF3', 'SNORD115.9', 'MTIF2', 'SDE2', 'BDH1', 'CDC20B', 'SS18', 'JRKL', 'INSL4', 'DCHS1', 'TXNIP', 'NRBP1', 'RGSL1', 'ANXA8', 'DYNLRB1', 'UBL3', 'TMBIM6', 'TREML5P', 'KIAA1467', 'HNRNPUL1', 'PAGR1', 'NPY', 'DBH', 'SNORD113.1', 'CYS1', 'EFNB2', 'PARD6A', 'PGAM5', 'RASAL2', 'VPRBP', 'CNGB1', 'MRPS35', 'MYO10', 'CCL28', 'HEXIM2', 'GPRASP1', 'HMGCL', 'IQCF6', 'HSPA13', 'ADGRE1', 'FETUB', 'EIF3B', 'IFRD2', 'PTMS', 'RHBG', 'KLF3.AS1', 'PIGO', 'RNF157', 'TNFRSF1A', 'KCNN3', 'GPHN', 'TRDN', 'DPY19L2P1', 'CAPZA2', 'ARID3A', 'CNN3', 'ROGDI', 'SULT2A1', 'CTSH', 'C17ORF89', 'STIM1', 'ADAT1', 'PSMA7', 'FBXW7', 'PPEF1', 'CCT3', 'OARD1', 'LSMEM2', 'RPS13', 'OR9A4', 'UCP2', 'CCDC51', 'CHDH', 'ABHD11', 'C9ORF163', 'SNORD113.7', 'TMEM59', 'EMILIN1', 'GPSM1', 'SUPT20HL2', 'VPREB1', 'ANKRD9', 'SPCS2P4', 'MED13L', 'NDN', 'C5ORF24', 'USP22', 'ACVR2B', 'PTPN1', 'CAND2', 'GDI1', 'ZFP92', 'GRM5', 'KCNC3', 'ADAMTS7', 'METRNL', 'ERGIC1', 'INTU', 'OSBPL2', 'NFU1', 'PDCD2L', 'IFNG', 'LINC01465', 'HADH', 'HIVEP3', 'SNX16', 'PI4KB', 'COX5B', 'KREMEN1', 'APOM', 'UBTFL1', 'PCBP2', 'ADHFE1', 'EPB41L1', 'UBC', 'C1QL4', 'RHNO1', 'DHCR24', 'COL11A2', 'FADS2', 'MYO3A', 'FOPNL', 'VCY', 'LRFN4', 'UCHL5', 'DOK6', 'PHIP', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 0.7598207023115313 Spearman Correlation: 0.6998966045720947 Coefficient of Determination: 0.21683760195919433 RMSE: 0.6014993670765607 NRMSE: 0.15316629754184022 MAPE: 556.5334679573232 Pearson Correlation: 0.03617792642311468 Spearman Correlation: 0.2308164269320331 Coefficient of Determination: -2.863860304617688e+23 RMSE: 324274151260.7971 NRMSE: 81596877597.64403 MAPE: 22620344078956.09 Predictor: ElasticNet Pearson Correlation: 0.5993329726176516 Spearman Correlation: 0.5127248314276027 Coefficient of Determination: 0.33124081556543006 RMSE: 0.5558327609811103 NRMSE: 0.14153771510303031 MAPE: 330.13150810145225 Pearson Correlation: 0.34522429885093303 Spearman Correlation: 0.32728837017917933 Coefficient of Determination: 0.0994917146353439 RMSE: 0.5750164550135057 NRMSE: 0.14469098790002913 MAPE: 343.9630947926118 Predictor: RandomForests Pearson Correlation: 0.5279259633562564 Spearman Correlation: 0.4049905068729057 Coefficient of Determination: 0.22598231354708065 RMSE: 0.5979773072562554 NRMSE: 0.15226943730902076 MAPE: 200.48574480709158 Pearson Correlation: 0.23090824448270394 Spearman Correlation: 0.2059363769980357 Coefficient of Determination: 0.04348463593432483 RMSE: 0.5926283066453396 NRMSE: 0.14912264579284357 MAPE: 211.00547192936335 Protein: TP53 x_train_column_count: 1002 x_train columns: ['SBDSP1', 'TXNDC15', 'NOP56', 'CCDC69', 'ZNF433', 'IDE', 'FAM204A', 'FGF7', 'TBC1D2B', 'RPP21', 'ANGPTL1', 'SS18L1', 'TMEM161B', 'WBP2NL', 'APOL6', 'WNT6', 'CBX1', 'OR2T35', 'ITGA6', 'PALD1', 'DCUN1D5', 'RNASEH2A', 'METTL24', 'KATNAL2', 'HNRNPC', 'TSC22D4', 'ERAS', 'CEP97', 'GIMAP2', 'TMIGD2', 'ATP6V1C2', 'QPCT', 'LOC283332', 'NID2', 'TCF12', 'FAM126A', 'FUS', 'SLC22A20', 'LRRC75A', 'TM6SF1', 'DNAJB1', 'HOXA11', 'MS4A14', 'NUTF2', 'ZG16B', 'EXOSC7', 'MAD2L1BP', 'PINK1', 'DNAH3', 'PRAMEF4', 'UBE2F', 'C16ORF54', 'ZNF525', 'ZNF101', 'TGFB1I1', 'ARRB2', 'ITGB1', 'TAF15', 'TNRC18', 'CCDC183', 'PTPRN2', 'MBLAC2', 'TEKT1', 'ASXL3', 'GALR1', 'TOMM7', 'NSA2', 'WTAP', 'ZFX', 'CEP44', 'C1ORF111', 'FAM169B', 'GPR52', 'BPIFA2', 'ANKRD66', 'MPP4', 'GSDMB', 'CHCHD10', 'KC6', 'CCBL1', 'KCTD16', 'PSMB2', 'CDKN2AIP', 'KAT6A', 'MARCH6', 'EXOSC1', 'UGT1A6', 'LINC01588', 'HAGH', 'SYS1.DBNDD2', 'FABP5', 'PDE7B', 'OTUD7B', 'GJA3', 'KRTAP19.7', 'CDC16', 'MAP3K5', 'DIRAS1', 'ESYT3', 'LUZP2', 'CELF6', 'GNMT', 'SPIN3', 'ZDHHC5', 'LOC400736', 'ACTA1', 'MESDC2', 'UBN1', 'TMEM86B', 'MT1E', 'BATF2', 'SPAG4', 'GCNT7', 'ARHGEF15', 'GIT1', 'IQCC', 'NOX4', 'CDC42SE2', 'C9ORF173', 'CHRFAM7A', 'IKBKG', 'LOC493754', 'CPOX', 'BEST2', 'RNF185', 'GC', 'NRM', 'MYL6B', 'ARSJ', 'TCEB2', 'IL27RA', 'HSPA6', 'SCARNA23', 'GUCY1A2', 'RAX2', 'YPEL4', 'FAM47C', 'TMEM69', 'GOLGA8F', 'IRGM', 'KIAA0754', 'PP7080', 'AKIRIN2', 'UGT2B11', 'MRGPRD', 'EPHA1', 'PLEC', 'S100A9', 'OR4X1', 'UQCRHL', 'CABYR', 'ARL15', 'MTMR2', 'SLC8A1', 'ADAM9', 'NME4', 'ZFAND5', 'NUCB1', 'OR4C16', 'NR2F6', 'SNORD116.8', 'GGT1', 'OSR1', 'ZNF16', 'HHIP', 'DEDD2', 'ABCD2', 'HEXIM1', 'PPM1A', 'SLC12A2', 'ZNF805', 'SLC16A4', 'PIGP', 'LRRN4', 'ADH4', 'EFHC1', 'ZSWIM3', 'AURKB', 'ZKSCAN1', 'CSN1S2AP', 'RASL12', 'NFE2L3P2', 'TFAP4', 'RBMY1E', 'FABP9', 'C17ORF50', 'SOX8', 'QSOX1', 'STK17A', 'MYCL', 'ZNF608', 'APH1A', 'STEAP1B', 'YIPF4', 'TMEM189', 'SMG6', 'KLC4', 'KCNS3', 'MMS19', 'WASF2', 'THAP1', 'KRT37', 'C3ORF35', 'ZADH2', 'PPIF', 'RASGRP3', 'MAGEA5', 'CTSZ', 'GIP', 'CIRBP', 'HES4', 'FIG4', 'PCDH9', 'ZNF154', 'DHX57', 'AP3S2', 'GJD4', 'TMED8', 'MAGEA4', 'RASGEF1C', 'TKTL2', 'GLIDR', 'TOP1MT', 'MEP1A', 'WIPF1', 'STRN3', 'SNORA36C', 'HLF', 'TTYH1', 'SLC35E3', 'SHE', 'PPAPDC3', 'KIF1BP', 'VPS54', 'ZNF879', 'FAM183CP', 'SNORD32B', 'NFE2L3', 'FOXP1', 'NIPAL4', 'TAS2R46', 'TOP2B', 'SYNPO', 'GIPR', 'SCG5', 'LRRC37B', 'SLC10A1', 'ARL14EP', 'SMIM19', 'MTAP', 'ZNF561', 'PRSS42', 'TIMM21', 'SZT2', 'NAP1L6', 'LRRTM2', 'LINC00469', 'RNF19A', 'TACC3', 'SV2C', 'CAV1', 'DYX1C1', 'OR6S1', 'FAM124A', 'NARF', 'CADPS', 'IFNG', 'SYPL2', 'RAB8B', 'CATSPER3', 'FAM173A', 'LOC284661', 'EIF2B5', 'ARIH2', 'PRAMEF14', 'CTSW', 'OR52B6', 'LBH', 'SNORD29', 'OCIAD1', 'AUP1', 'BEX5', 'EFNB2', 'PI4KB', 'CYP2A6', 'MAFG.AS1', 'LOC152225', 'HERC2P2', 'ALG9', 'CCDC142', 'OR1N2', 'TMEM38A', 'DTX3L', 'VCP', 'C1ORF189', 'SLC6A20', 'MYLK4', 'TBL1X', 'SPTBN5', 'NOP10', 'ZSCAN22', 'EGR3', 'LMO3', 'FOS', 'IL21', 'WDR87', 'NPTX2', 'DCLRE1B', 'N4BP2L2', 'HSDL1', 'KCTD9', 'GSTA2', 'NOSIP', 'ZPLD1', 'MLF1', 'FAM182A', 'FRA10AC1', 'CEP112', 'GAS2L1', 'CCDC42', 'OR2B6', 'PIGN', 'SRXN1', 'NDUFB11', 'PDE3A', 'C1ORF116', 'MED18', 'SLC1A2', 'NKX6.1', 'PAGE2', 'RYK', 'AADAC', 'ALDH18A1', 'OAZ3', 'POF1B', 'TREML2', 'PTCHD2', 'ZNF580', 'BUB1', 'DYRK4', 'NT5M', 'INTS3', 'GRAP', 'CEBPD', 'IP6K2', 'GDF3', 'PCDHB7', 'LOC100132287', 'LCE2B', 'RHOG', 'PRTN3', 'DHFR', 'AMHR2', 'WBSCR28', 'CELF3', 'LTBR', 'RCAN3', 'LRRTM3', 'KCNV1', 'A2M.AS1', 'MRPL44', 'ZIC3', 'DPH5', 'ELN', 'PSIP1', 'HMBOX1', 'KDM8', 'DNAJC27', 'ENOX2', 'SPATA31D5P', 'ZBTB9', 'GPR62', 'TRIP10', 'HLA.DRB5', 'NUDCD2', 'NFKBIB', 'TMEM181', 'FAM84A', 'PDIA5', 'MS4A4A', 'OR1L1', 'PAX5', 'RNF220', 'TTTY23', 'EIF4EBP3', 'SRGN', 'TST', 'NEU1', 'REEP1', 'LINC00476', 'HOXB8', 'CACNG6', 'TTC33', 'TBCD', 'SPP1', 'HIGD2B', 'C17ORF53', 'PPM1G', 'COL26A1', 'TMEM176A', 'CKAP2L', 'SLC16A2', 'TAAR6', 'OR4D6', 'SMARCAD1', 'FAM83G', 'PTPMT1', 'MKKS', 'RPAP1', 'RNF222', 'CEP126', 'ZNF140', 'NIPBL', 'SP5', 'LOC340017', 'ST6GAL2', 'NF1P2', 'SP140L', 'ABL2', 'BCAS4', 'FOXO3', 'BRINP1', 'ATXN3', 'PVRIG', 'SKOR1', 'ITGA5', 'MUSTN1', 'WDFY4', 'GAS1', 'TMCO3', 'CLCN1', 'SH3PXD2A', 'INSC', 'TRAPPC6A', 'IGFBPL1', 'EMD', 'ALPK3', 'FHL3', 'RAB8A', 'G6PD', 'BLMH', 'DTHD1', 'PTDSS1', 'SETD8', 'SPATA24', 'FBXL19.AS1', 'BAP1', 'AZIN2', 'TFAP2C', 'CATSPERD', 'PTPN7', 'VRTN', 'RAPGEF3', 'NCF1C', 'DNASE1', 'SNORD114.21', 'LANCL1', 'TAF10', 'PRR34.AS1', 'DRAM2', 'OR10R2', 'NKTR', 'PDE6C', 'SLC9A4', 'CCDC88C', 'LOC647859', 'TMEM8B', 'SLC45A2', 'SNORD115.3', 'CA7', 'TMED3', 'HSPB7', 'YTHDC2', 'PTP4A3', 'ACLY', 'LGALS13', 'FAM183B', 'ZNF223', 'CCDC85C', 'WWC2', 'NCOA1', 'HIST1H2AH', 'ABHD4', 'ZBTB33', 'MYL2', 'GALNT11', 'IFNA13', 'USP44', 'TMEM52', 'PSMD5.AS1', 'TAPBPL', 'RNF43', 'SHISA6', 'PSMA8', 'SPG20', 'ABCD3', 'IQCF3', 'CBX6', 'TDRP', 'TACSTD2', 'DAZL', 'GALNT16', 'SNORA28', 'SEZ6L2', 'PCDHB15', 'USP17L6P', 'MAPK8', 'NPNT', 'MSI1', 'CHRDL1', 'STEAP2', 'TRAPPC2B', 'HAO2', 'LINC00598', 'LINC00470', 'APBB2', 'PAFAH2', 'HAPLN1', 'APLF', 'MIR155HG', 'NPM3', 'SESN2', 'PRG1', 'NPEPPS', 'MAPK8IP1', 'RPS6KA4', 'CDHR2', 'KRTAP19.2', 'IFNB1', 'HARS', 'ADORA2A.AS1', 'TMEM114', 'C8ORF76', 'TTTY17B', 'UTF1', 'OR2L1P', 'PTGER2', 'CNTN6', 'SPNS1', 'MPO', 'MRPL36', 'DCD', 'DAD1P1', 'HRG', 'OPALIN', 'FGF11', 'CHKA', 'EIF3B', 'C10ORF105', 'PTRH2', 'LGALS8', 'SNORA31', 'TIMM44', 'PUM1', 'SYN2', 'UBASH3B', 'GALNT4', 'QSOX2', 'TNFRSF21', 'STK16', 'FTHL17', 'RIPK2', 'ANKLE1', 'ZXDB', 'PALLD', 'SLC46A3', 'MRPL23', 'PCDH17', 'MICAL1', 'GREB1L', 'PF4', 'PCYT1B', 'SFMBT1', 'ZNRF2', 'C11ORF68', 'LINC00312', 'CTNND2', 'SCO2', 'TNFSF12.TNFSF13', 'C6ORF141', 'DR1', 'RRAGC', 'TMEM30A', 'CBLN4', 'OR56A3', 'ATG5', 'SNORD115.48', 'ZNF808', 'SYNGR2', 'BLVRA', 'PCDHA6', 'SHROOM1', 'GRIN3A', 'UNCX', 'TMEM200B', 'SLC5A9', 'EBP', 'MFSD8', 'PPP2R2D', 'BAALC', 'GAB2', 'R3HDML', 'SENP1', 'KCMF1', 'SLC25A36', 'SH2D6', 'PSD3', 'DNMBP.AS1', 'LINC01465', 'NUTM2G', 'DUSP15', 'FOXD4L1', 'LINC01105', 'NME7', 'CTCFL', 'CPQ', 'KYNU', 'TUSC7', 'LYPLA2', 'TMEM143', 'ZNF138', 'PHF2', 'MDH1B', 'LINC00589', 'HENMT1', 'C19ORF57', 'RYBP', 'LINC00167', 'PRSS36', 'TRA2A', 'LYRM2', 'NRK', 'LRRK1', 'OR4D5', 'SGK3', 'C12ORF57', 'MTFP1', 'LDHC', 'AXIN1', 'KRTCAP3', 'GYG2', 'CDK5R1', 'GNPTAB', 'ASAP1.IT1', 'TTK', 'ALG8', 'KLHDC4', 'EHMT2', 'SERHL2', 'NKX3.1', 'NUFIP2', 'GRAMD1A', 'MT3', 'VDAC1', 'HPCAL1', 'FAM86C2P', 'MTHFD2', 'DPYSL2', 'LAS1L', 'HTR2A', 'H1FX.AS1', 'IHH', 'PRODH2', 'FAM155A', 'C3ORF17', 'METTL4', 'PES1', 'KIAA0753', 'MMP10', 'OR7G2', 'ZNF552', 'PXYLP1', 'CDHR5', 'FAM21A', 'TECPR2', 'SVEP1', 'GPATCH3', 'MUT', 'TMEM236', 'RIOK1', 'POLD1', 'MTO1', 'CYP2C9', 'HDAC6', 'UBR5', 'TLE1', 'C14ORF166', 'FBXO36', 'GALK1', 'OR4D11', 'FOXK1', 'RPS6KA5', 'WFDC10B', 'MRPS15', 'BAX', 'RLN1', 'TOPORS', 'SLC6A11', 'STT3B', 'CCDC103', 'PCDH11X', 'UBL4A', 'LY86', 'MECR', 'SLC6A4', 'GPRIN2', 'FERD3L', 'CAPN15', 'PA2G4P4', 'TUBD1', 'GP1BA', 'MTMR12', 'ATP6V0C', 'STARD13', 'TXLNGY', 'ATAD5', 'SLC2A3', 'TTC31', 'DNAJB8', 'SNX27', 'GOLGA6L5P', 'OR5H6', 'TBC1D3B', 'RHOBTB2', 'EDA', 'EIF3CL', 'PRICKLE4', 'BMS1P5', 'FAM129A', 'MAGEB18', 'TECR', 'CTNS', 'OR10X1', 'MASTL', 'IL36B', 'MTHFSD', 'PREX1', 'LINC00111', 'DDB1', 'HNMT', 'GPR150', 'LOC100190940', 'PLSCR2', 'ULK1', 'CYTH2', 'BVES', 'PPIAL4G', 'GEMIN5', 'FN3KRP', 'TPM2', 'GPR19', 'PDZD8', 'FCGR1B', 'TMCO4', 'ATF6B', 'CCDC121', 'MYO15A', 'GRB2', 'TEX15', 'FOXJ1', 'PIPOX', 'TCP10L', 'PRKCG', 'BRMS1L', 'ZNF19', 'SNORA41', 'ANKRD34C', 'ZCCHC6', 'LSM2', 'OR5A1', 'PPT1', 'ARRDC3', 'OR2T2', 'JADE3', 'LINC01366', 'MOSPD1', 'ERI1', 'APIP', 'RPS6KC1', 'RAB7A', 'AMELY', 'TLE3', 'IL3', 'LOC285074', 'OR6F1', 'VLDLR.AS1', 'PNPLA3', 'SLC28A1', 'TRIM47', 'CAAP1', 'CRTAP', 'KIAA1324', 'UPF3A', 'YIF1A', 'VAMP8', 'NR5A1', 'LRRC75B', 'SLC25A20', 'MAN2C1', 'LINC01600', 'C1ORF210', 'MUS81', 'FAM214B', 'GTPBP6', 'CFP', 'C20ORF27', 'TRIM26', 'ZNF579', 'SGPL1', 'KRTAP26.1', 'KIF16B', 'PAIP2', 'LOC401127', 'CHTF18', 'CNBD1', 'LRRC37A6P', 'CH25H', 'OS9', 'LOC389705', 'ZNF773', 'PAK2', 'SERF2', 'LPAR6', 'FLJ42627', 'YRDC', 'TMEM198', 'CHRM4', 'RPL11', 'TLL2', 'F2R', 'ASB13', 'CLASRP', 'RHOBTB1', 'NRADDP', 'PLEKHA7', 'TCEAL5', 'SSB', 'GRASP', 'CES1', 'CYP4F12', 'KRTAP15.1', 'RGAG1', 'DENND5B', 'HNF1A', 'AGBL5', 'KRTAP5.1', 'KCNK10', 'DXO', 'WNT8A', 'TSPAN33', 'KCNA1', 'SNORD115.27', 'TIGD2', 'SLC25A19', 'SYAP1', 'KHDRBS2', 'CXORF51A', 'PHF7', 'ZNF709', 'LGALS14', 'BCL2A1', 'DNM1P35', 'CT45A2', 'TGM3', 'TXNRD1', 'FASTKD5', 'DICER1', 'C16ORF52', 'C9ORF117', 'FIGLA', 'DLX4', 'RPN2', 'SLAMF6', 'C19ORF60', 'YME1L1', 'PITPNC1', 'WDR12', 'SOX13', 'GJB7', 'SOS2', 'VCPKMT', 'RPS13', 'ANKRD6', 'ZNF765', 'CILP', 'LSM3', 'CERKL', 'SNORD115.5', 'ZNF157', 'MEX3A', 'GJC3', 'DCAF12', 'C1ORF64', 'PYGO1', 'VPS45', 'GAGE8', 'TEX2', 'PODXL', 'BRD2', 'SLC19A2', 'CEACAM1', 'DDX28', 'KRT71', 'GXYLT1', 'STS', 'PNISR', 'DNAJC17', 'AKAP9', 'C11ORF52', 'FAM83A.AS1', 'CLCC1', 'ZNF79', 'LAIR2', 'TDRKH', 'BUD13', 'C6ORF132', 'CCDC84', 'BET1', 'TBC1D2', 'SDPR', 'MAP3K12', 'LOC441204', 'GOLPH3', 'PGLYRP4', 'DSCR10', 'SERPINB1', 'LETM1', 'FAM138E', 'KCND1', 'ALX3', 'DNAH6', 'OR1E2', 'OR7D2', 'UCP1', 'FAM207A', 'PSMC6', 'SCARNA5', 'ULK4', 'OR51B6', 'NANOGNB', 'AJUBA', 'DCHS1', 'MESTIT1', 'TIPIN', 'RPRM', 'PPM1N', 'TGFA', 'RALGAPA2', 'LAPTM4A', 'OR52J3', 'MTCH1', 'ARMCX3', 'ZMYM4', 'CHST5', 'BBS9', 'POU6F2', 'ATP5B', 'CD37', 'SEMA7A', 'UXT.AS1', 'PPP1R2P3', 'ZFP1', 'ZNF131', 'MUCL1', 'OR51D1', 'PI4K2B', 'MRRF', 'FIGNL2', 'SLC26A6', 'LOC100130691', 'SNORD116.20', 'ORC3', 'LGMN', 'HDAC11', 'SNORA70C', 'ZC3H12D', 'CD226', 'BCL3', 'KIR2DS4', 'VNN1', 'C19ORF53', 'FAM101B', 'C11ORF63', 'PRR15', 'PACS1', 'IZUMO1R', 'DPY19L3', 'USH1C', 'SMIM10', 'PITX3', 'KIAA1033', 'UNC79', 'RAET1G', 'SPOP', 'EPHX3', 'DNM2', 'MORN5', 'ZNF396', 'WDHD1', 'GTPBP2', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.8837930498169757 Spearman Correlation: 0.8348027186761932 Coefficient of Determination: 0.7774875034767827 RMSE: 0.19990834094537893 NRMSE: 0.05084268189561763 MAPE: 782.1323865719347 Pearson Correlation: -0.022068963852965723 Spearman Correlation: 0.0854076552172826 Coefficient of Determination: -1.8932237550980613e+23 RMSE: 229802524474.29977 NRMSE: 61551499792.23243 MAPE: 26927261771708.32 Predictor: ElasticNet Pearson Correlation: 0.5520175891080074 Spearman Correlation: 0.5370953673911333 Coefficient of Determination: 0.2851717623106811 RMSE: 0.3583063968725981 NRMSE: 0.09112805434334498 MAPE: 891.8574915868494 Pearson Correlation: 0.33588136717081746 Spearman Correlation: 0.33544308532525347 Coefficient of Determination: 0.10897029812060777 RMSE: 0.4985398897634934 NRMSE: 0.13353150924427304 MAPE: 172.5982847115115 Predictor: RandomForests Pearson Correlation: 0.4985958776771747 Spearman Correlation: 0.5086846054896796 Coefficient of Determination: 0.232443510189153 RMSE: 0.3712862667987284 NRMSE: 0.09442922424240913 MAPE: 829.4784807032489 Pearson Correlation: 0.39056968374808965 Spearman Correlation: 0.3700912144923789 Coefficient of Determination: 0.13942692561595327 RMSE: 0.4899454170140541 NRMSE: 0.13122952109657268 MAPE: 200.3955471234948 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['FCGBP', 'ALOX12P2', 'ANXA9', 'IL1RL2', 'CRAMP1L', 'CENPB', 'HOXA9', 'NKD1', 'MAGOH', 'XIRP2', 'NKAIN4', 'ATG4C', 'FBLN7', 'OR2M4', 'CALCOCO2', 'PSAT1', 'MYLK2', 'MPV17L', 'CDK1', 'CLK4', 'OR4M1', 'RASGEF1B', 'NRXN1', 'MAP2K1', 'WBP1', 'FERMT2', 'VPRBP', 'A2M.AS1', 'GDF6', 'PLEKHH1', 'PWWP2A', 'DOK1', 'GJB2', 'JAKMIP1', 'ZNF678', 'SLC35G3', 'MAGEA12', 'OLFM3', 'OR4K15', 'PIGR', 'MVP', 'NR2E3', 'FSTL1', 'ZNF341', 'CD5L', 'CASC8', 'TRNT1', 'RTP2', 'FCER2', 'OR6V1', 'OR52W1', 'LHPP', 'PTK6', 'LRRC25', 'MYO1C', 'SNHG5', 'RBM15B', 'CCDC185', 'SNORD113.6', 'PFKFB4', 'RPP25L', 'CHI3L2', 'UCN2', 'DEFB114', 'TEKT4', 'BMP6', 'MRPL52', 'ELOVL1', 'TTC7B', 'SACM1L', 'DMRT1', 'ALG9', 'SNORD6', 'SLC30A8', 'SOX18', 'EVA1B', 'PLK5', 'SMIM20', 'ZNF778', 'UBE2M', 'METTL21B', 'ANP32AP1', 'SRFBP1', 'RAB38', 'CTNNA1', 'ARMC1', 'PNLDC1', 'LRP2', 'FJX1', 'NME1', 'GCSAML.AS1', 'NDUFA7', 'TEAD3', 'PRICKLE4', 'ARID2', 'TMPRSS13', 'H2BFWT', 'FYB', 'C16ORF91', 'FAM106CP', 'RSPH14', 'FRMD1', 'TMPRSS11D', 'KCNF1', 'SNORD79', 'BST2', 'FUT2', 'PNPLA1', 'ACBD7', 'LINC00893', 'FAM92A1P2', 'TMEFF1', 'LINC00592', 'AARS2', 'MAGEB3', 'SULF2', 'OPN3', 'FAM95B1', 'GTPBP8', 'ACOT13', 'ITGAX', 'TMEM170B', 'SLC39A3', 'FAM195A', 'ITPR2', 'UPP1', 'HSPB11', 'LOC441666', 'USP48', 'GPHN', 'HGFAC', 'CCDC73', 'RHOA', 'USP42', 'TMEM217', 'NAGLU', 'DNAJC25.GNG10', 'L2HGDH', 'PGGT1B', 'BDH1', 'CHAF1A', 'ZNF382', 'STX17', 'FRMD6', 'AFAP1.AS1', 'LDLRAD3', 'SMARCA5', 'MPHOSPH9', 'AIP', 'RGS16', 'SLC11A1', 'MYH10', 'ZYX', 'PARP15', 'DENR', 'CSNK2A3', 'PNISR', 'DOK2', 'LINC01547', 'AADACL3', 'SLC35A1', 'CHAC2', 'ZNF334', 'RDH5', 'TIMD4', 'SIPA1L3', 'SH3BP2', 'THOC5', 'CCL18', 'TXNDC9', 'SLC7A5P1', 'SLC1A6', 'SLC30A7', 'GNAI2', 'ATP6V0D2', 'PPAPDC1B', 'ZNHIT2', 'C21ORF91', 'SLC24A5', 'PEX12', 'AOX1', 'TNNT2', 'SNX17', 'MEA1', 'LGSN', 'FAM47E', 'STOML2', 'RHBDD2', 'APOA2', 'LBR', 'MTRF1L', 'KISS1R', 'SFXN2', 'PRPF4', 'PLEKHD1', 'LRRC45', 'DKK2', 'SLC2A4', 'FAM204A', 'CFHR4', 'TFPT', 'RGPD8', 'DACT2', 'LIN7B', 'OR4N2', 'RPL11', 'NEK4', 'HEATR5A', 'BTF3L4', 'LDOC1', 'LOC388242', 'ACAN', 'MYH3', 'DCDC2', 'TROVE2', 'CRYBA2', 'DGAT2', 'ASIC4', 'CDK19', 'C3ORF84', 'SULT1C3', 'COX7B2', 'IL11', 'GIGYF1', 'EDEM2', 'NCAM1', 'CORO7', 'C17ORF97', 'CNNM4', 'KATNB1', 'NAA20', 'SLC39A11', 'TTC29', 'OR2F2', 'RNF219', 'ZNF653', 'OR2A9P', 'IL13', 'C4ORF50', 'CNTROB', 'PROSER3', 'DSTN', 'TTC39B', 'PAX7', 'AATBC', 'ERCC1', 'TYK2', 'MFRP', 'OR1N1', 'CXORF36', 'PBXIP1', 'PHYHIP', 'SLC15A2', 'HCG18', 'ZNF813', 'ITGB7', 'IL1RAPL2', 'CPTP', 'NAT16', 'LSM3', 'RPL3L', 'SOX3', 'RAB22A', 'MSGN1', 'ENG', 'IPW', 'FMO1', 'FBXL22', 'TNFAIP8L2', 'NLRP1', 'TCL1A', 'DPP9', 'LRFN1', 'DEGS1', 'FIGF', 'TMPRSS11B', 'SPDYE5', 'CBX4', 'IHH', 'ARCN1', 'RNF141', 'DACT3', 'CNGB3', 'API5', 'AJUBA', 'ZNF626', 'DNASE1L3', 'SLC25A18', 'FSCB', 'ASB13', 'GOLGA2P6', 'PDIA5', 'SLC2A13', 'SPATA45', 'REPS2', 'BCL11A', 'EPHA5', 'PSG6', 'CXORF40A', 'PRDM12', 'XKR4', 'SNRPF', 'SLC6A17', 'UPRT', 'METAP1D', 'CCKAR', 'DZIP1L', 'PCDHB5', 'HPCAL4', 'FREM1', 'TSPYL4', 'HSPB7', 'PITRM1', 'NUDT18', 'CLEC2D', 'ACACA', 'ZNF213', 'SNORD19B', 'C1GALT1', 'SFR1', 'DHX37', 'EWSR1', 'PTGES2.AS1', 'RPE', 'TRIM28', 'MAP6', 'GDPD5', 'TRIM37', 'EFR3B', 'SCLT1', 'ACTBL2', 'PCBD2', 'C4ORF22', 'TLR8', 'PAX4', 'PRKD3', 'PTP4A2', 'ZNF611', 'C1ORF100', 'PROS1', 'WISP2', 'PRRC2C', 'FBXO44', 'MRPL46', 'NME1.NME2', 'ELL3', 'STRAP', 'AKR7A3', 'NBPF9', 'TBC1D5', 'NPS', 'CD40', 'TNFRSF14', 'CHD4', 'NT5DC3', 'P2RY12', 'CDK17', 'ST3GAL1', 'ARHGEF19', 'DPH3P1', 'GOLGA2P7', 'NBPF22P', 'AADAT', 'GDE1', 'RAB3C', 'UBQLNL', 'TAS2R19', 'PPP2R1B', 'CADM3', 'MOSPD1', 'SIX1', 'LCMT1', 'INTS4P2', 'PDE1B', 'SMPDL3B', 'PDZRN3', 'FBXO48', 'RPUSD2', 'MAP4', 'SLX4', 'LIN28B', 'PCDHB2', 'MAGEB2', 'SLCO6A1', 'FOXC2', 'ZDHHC21', 'ZCCHC12', 'OR2A2', 'TRIM35', 'PARK2', 'DPH1', 'OR5W2', 'PRAMEF10', 'ESPNL', 'HIST2H2BF', 'EDEM3', 'TPPP3', 'PLA2G2F', 'COL6A4P2', 'ETAA1', 'F3', 'ZNF677', 'TRIM17', 'ABCF1', 'SVIP', 'RAB9B', 'POLR1B', 'TIMM9', 'TEX14', 'APOA1', 'C17ORF75', 'MCM7', 'ECI2', 'TRAF3IP2', 'GJA9', 'OSTN', 'FRMD4B', 'R3HDML', 'EEF1E1', 'OR52B6', 'FAM162B', 'RBM34', 'MMD2', 'HEATR4', 'FOXA2', 'KRTAP5.4', 'ZBTB22', 'SERTAD4', 'TBP', 'JHDM1D.AS1', 'SLAIN2', 'SRSF2', 'PPP6R3', 'PRMT2', 'TMEM155', 'AGAP11', 'SMAD9', 'DKFZP434J0226', 'RAX', 'FAM160B2', 'INSL3', 'GPR173', 'CRBN', 'SFMBT1', 'MCPH1', 'TPM3', 'MMP13', 'C11ORF96', 'OR51G1', 'OR13C4', 'ATF7IP', 'HIST2H2BA', 'C16ORF82', 'HMG20B', 'SPA17', 'OTUD6B', 'OR8G2', 'PSKH1', 'UNC119', 'RAB11FIP5', 'KLF3.AS1', 'CHMP1B', 'RAB8A', 'SVIL', 'ART5', 'HILS1', 'SMAD5.AS1', 'DGKQ', 'OR5B12', 'RSRP1', 'STRC', 'GTF2H4', 'ASF1B', 'LIPM', 'PHKB', 'MGC2889', 'LMX1A', 'INTS7', 'IMMT', 'DLD', 'LANCL2', 'C11ORF52', 'C1ORF68', 'TM2D3', 'RHPN2', 'ADAT3', 'PIK3C2B', 'OPN1SW', 'C7ORF72', 'BASP1', 'ZNF184', 'BTN2A1', 'ARF4', 'ZNF667', 'PAIP1', 'SDR42E1', 'CCDC103', 'MCTP2', 'IFT57', 'TTLL2', 'FAM200A', 'FBXL14', 'DDHD2', 'RAP1GAP2', 'RREB1', 'PCDHB8', 'PDRG1', 'USP53', 'DUSP21', 'VRK3', 'FAM136A', 'CSK', 'LBP', 'AKR1D1', 'ARL6', 'SNORD116.29', 'FTLP10', 'MRPL38', 'C1ORF61', 'TXLNGY', 'ORC1', 'PRSS30P', 'SLC8B1', 'METTL7A', 'ZC3H12D', 'SNORA55', 'SPNS1', 'CYP4F22', 'LPCAT4', 'C20ORF27', 'PNO1', 'RNF182', 'FAM217A', 'NUP37', 'XPC', 'RHOH', 'DPYSL5', 'URB1.AS1', 'TMEM154', 'C6ORF15', 'EVA1A', 'SRPR', 'TIMM13', 'CLEC4M', 'OR51V1', 'HNMT', 'LINC00160', 'TPD52', 'OR5M8', 'TBL2', 'PTGDR', 'EMILIN2', 'CCDC54', 'ZNF426', 'PHF5A', 'C5ORF64', 'DPRXP4', 'FLRT1', 'ANKMY2', 'TPTE2P3', 'SNORA70C', 'DNAJC13', 'LCE1C', 'APOBEC2', 'PCDH7', 'COMP', 'ADIG', 'DENND1C', 'LINC01565', 'MINPP1', 'CDKN2B', 'IDNK', 'DTNA', 'SLITRK1', 'PRKRIR', 'MED1', 'EVI5', 'GLP2R', 'C2CD2L', 'F2RL1', 'GSTZ1', 'GPR82', 'SLIT3', 'STK26', 'ATAD5', 'LAMA5', 'OR2T11', 'KIAA1671', 'ST13', 'COX6A2', 'ZNF41', 'GPC4', 'GMPPB', 'METAP2', 'PCYT2', 'SLAMF7', 'CHRNA7', 'POC1A', 'OR2C1', 'GFAP', 'RASA4', 'ASPHD2', 'FIGLA', 'LACC1', 'SUPT7L', 'PTAR1', 'MIXL1', 'FDXR', 'C7ORF73', 'SIGMAR1', 'ATPIF1', 'KIZ', 'OR51M1', 'CCDC102B', 'PPP2R3A', 'SH2D1A', 'RPGR', 'CENPP', 'SLC52A1', 'OR6T1', 'FHL5', 'DEFB135', 'SLC35E3', 'KRT6C', 'MYO5C', 'RBMY1F', 'IRF2BP1', 'PCYOX1', 'C2ORF57', 'SEL1L', 'BAZ1A', 'ADCY8', 'MEPCE', 'PRR14', 'SMAD3', 'HIGD1B', 'RANGRF', 'ZNF511', 'DTNBP1', 'NFKB2', 'MED29', 'SLC6A15', 'BRICD5', 'SLC17A2', 'GSDMD', 'VSX1', 'MMP23B', 'GPIHBP1', 'PLBD2', 'ZNF226', 'CTAGE5', 'CISD2', 'PGLYRP3', 'ACTRT3', 'CAPN5', 'KCNK2', 'TNFRSF4', 'HDX', 'CCDC78', 'MRPS23', 'ZAK', 'TNS2', 'TPPP', 'AMD1', 'CXORF56', 'EIF4E3', 'ANGPTL6', 'DUSP6', 'IL18RAP', 'SERPINB8', 'PLBD1', 'BLOC1S3', 'PDE12', 'C10ORF10', 'ANKRD22', 'TMEM156', 'SPRR3', 'CAPN7', 'PANK4', 'GDAP1', 'NCBP1', 'CCL7', 'CAMTA1', 'DUSP15', 'TFAP2B', 'APOPT1', 'NFKBID', 'CEP68', 'CARKD', 'SLC35F3', 'SCN1A', 'SEC61G', 'ETFA', 'PRAMEF16', 'UGT2B15', 'HAUS7', 'GABRB2', 'IRGQ', 'C2CD2', 'CD300E', 'GUSBP5', 'LOC284379', 'TSPO', 'PHOX2B', 'ZNF781', 'METTL21A', 'TRPV5', 'DTYMK', 'LRRC56', 'NMS', 'HOXB5', 'MRPL44', 'SERPINE3', 'RPPH1', 'SNORD25', 'KMT2D', 'SLC16A5', 'SNORD115.7', 'ZNF416', 'SNORA81', 'ATP5D', 'TRAPPC2', 'ZNF578', 'MAPKAPK5.AS1', 'UGT3A2', 'OS9', 'TRPS1', 'ZCCHC7', 'SOX2', 'NCF2', 'BEST2', 'PRG3', 'GPR65', 'ZP2', 'TM6SF1', 'SULT1A1', 'POLR2G', 'OSBPL9', 'DRC7', 'TAS2R46', 'LRRC7', 'PHKA1', 'ARHGAP30', 'HMGN3', 'TIFAB', 'TTF2', 'NFYC.AS1', 'CTBP2', 'RDH11', 'APBA1', 'FZD5', 'PTCD1', 'OR51T1', 'KCNS2', 'KRT82', 'OR1J1', 'PIWIL1', 'PCBP3', 'ABR', 'POLA2', 'PRX', 'EGR4', 'DLEC1', 'MANBA', 'PSEN2', 'CSMD3', 'NEUROD2', 'ZNF777', 'ANO9', 'SLC25A51P1', 'SNORD4A', 'SERPINB4', 'LPPR3', 'MAGEC1', 'TMEM231', 'SLC16A11', 'COPS3', 'NDST2', 'RGMB', 'RAB15', 'LARS', 'THYN1', 'TRIML2', 'THAP10', 'SIRT5', 'IL15RA', 'KIF18A', 'ZNF33A', 'EEF2', 'MAGEL2', 'ZSCAN25', 'KANSL3', 'HGF', 'RTN4', 'FEZF2', 'YWHAQ', 'PSTK', 'HOXB6', 'ZNF322', 'FOXRED2', 'PMS2P4', 'KDM4D', 'ENO2', 'OR4D5', 'ABCA11P', 'SEPT7P2', 'TOR1B', 'UNC5A', 'TMEM119', 'TREML5P', 'FIS1', 'SPINK9', 'CD164L2', 'SLC13A2', 'OR2C3', 'HHATL', 'C8ORF33', 'TMOD2', 'MCOLN1', 'NUGGC', 'ZNHIT6', 'SLC26A8', 'PSMC3', 'TSPAN5', 'SERINC3', 'ALG14', 'SLFNL1', 'MCMBP', 'OR2AK2', 'NAP1L5', 'BIVM', 'LRRC69', 'ZBBX', 'ANO2', 'TCIRG1', 'APBB1', 'CRLF1', 'DSCR3', 'LRRC52', 'ZNF19', 'FOXC1', 'FAM3B', 'MDM2', 'RAC3', 'EFCAB6', 'ATP1B1', 'STAB2', 'SNORD116.23', 'MIIP', 'PAX1', 'ZC3H8', 'TOR3A', 'MVK', 'C8ORF34', 'FMO4', 'RNF39', 'SMUG1', 'FAM138F', 'OR7C2', 'MMP17', 'SDC3', 'IFNK', 'ERICH5', 'CXADRP3', 'C12ORF77', 'PSAP', 'ANXA3', 'SUSD1', 'OCRL', 'P2RY6', 'LCN10', 'IL1RAPL1', 'WIPI2', 'TJAP1', 'TMEM9', 'FAM196B', 'RFFL', 'MORF4L2', 'LRP2BP', 'ITGA8', 'KATNBL1', 'ZDHHC14', 'NOXA1', 'FAM209A', 'C9ORF171', 'CBLN3', 'TPTE', 'SCAND2P', 'LINC00341', 'ASB16', 'MFSD7', 'KLK1', 'RAPGEF2', 'ATRNL1', 'ZDHHC22', 'ICOSLG', 'SATB2.AS1', 'REV1', 'TNPO1', 'ATL2', 'LINC01554', 'UQCRHL', 'SNORA8', 'PAIP2', 'EPHA4', 'ARFGAP1', 'FEN1', 'ALOX5AP', 'CCDC82', 'MOGAT3', 'SIKE1', 'ZNF571', 'ANGPTL3', 'KLHL12', 'C14ORF166', 'PER1', 'CABP7', 'SHB', 'RET', 'MYO1E', 'MTHFD1', 'RB1CC1', 'NLE1', 'CEACAM21', 'KRT17P5', 'FSD1', 'RAPGEFL1', 'TSG101', 'WDR81', 'LRRC61', 'ARL6IP5', 'C5ORF15', 'DUT', 'ERRFI1', 'LINC00661', 'CNOT11', 'POGK', 'SLC6A11', 'MAP1LC3B', 'TRIM49D2', 'ARL14', 'OR2AG2', 'C2CD4C', 'SMARCD3', 'FAM109B', 'G6PC3', 'MSMP', 'OR52E8', 'LOC344967', 'MIEF2', 'CCDC177', 'CTR9', 'FOXJ2', 'SNORA66', 'DNAJC30', 'PSENEN', 'VRK2', 'LYPLAL1', 'GPR17', 'SDK1', 'HSPA1B', 'DEFB110', 'TSG1', 'SUB1', 'SIM2', 'DBX2', 'PRKCA', 'RAB42', 'AGGF1', 'ZFP62', 'RPL23', 'SKAP1', 'FOSL2', 'CYP4V2', 'ZMIZ1.AS1', 'ROGDI', 'LOC388955', 'MGC57346', 'C9ORF50', 'SCARNA9L', 'ZNF430', 'MTMR3', 'TBC1D22B', 'HYAL3', 'OR52A5', 'HLCS', 'ZNF222', 'SLC22A1', 'CHD8', 'NFE2L3P2', 'MAX', 'AVPR1A', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.897150461835722 Spearman Correlation: 0.8906131987905813 Coefficient of Determination: 0.8038556801507906 RMSE: 0.3348101614594847 NRMSE: 0.06585565725009535 MAPE: 362.3426020513998 Pearson Correlation: -0.10652454567030507 Spearman Correlation: 0.12291175700445144 Coefficient of Determination: -2.709911045290423e+22 RMSE: 111554710926.12065 NRMSE: 35727346976.55342 MAPE: 15101509912002.182 Predictor: ElasticNet Pearson Correlation: 0.6523968178333699 Spearman Correlation: 0.6453785657074641 Coefficient of Determination: 0.38832453372895626 RMSE: 0.5912501898861916 NRMSE: 0.11629626079586775 MAPE: 376.7546953252788 Pearson Correlation: 0.39029086796101586 Spearman Correlation: 0.3591541041658874 Coefficient of Determination: 0.13327071328819817 RMSE: 0.6308878061330937 NRMSE: 0.20205285250500216 MAPE: 275.1927547975041 Predictor: RandomForests Pearson Correlation: 0.43264107359843407 Spearman Correlation: 0.48536249844071494 Coefficient of Determination: 0.1669293492248719 RMSE: 0.6900041131663689 NRMSE: 0.13572071462753127 MAPE: 595.5713211196564 Pearson Correlation: 0.3645885085778817 Spearman Correlation: 0.35876008429032785 Coefficient of Determination: 0.12544331103528228 RMSE: 0.6337301662363818 NRMSE: 0.2029631680335838 MAPE: 270.36525902955424 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['MOS', 'TTTY5', 'FAM111B', 'ASB1', 'CST13P', 'PLA2G4D', 'KIR2DL4', 'MSANTD2', 'C2ORF69', 'MED21', 'POLR1C', 'TCAF1', 'PHF14', 'GPHN', 'CCDC97', 'BLOC1S3', 'ZNF304', 'USP40', 'TACC1', 'SLAIN2', 'FAM78A', 'PTP4A3', 'SPIRE1', 'MVB12A', 'KMT2B', 'FXYD7', 'TGFBI', 'PDE6D', 'WFDC10B', 'ZUFSP', 'TTF2', 'AMZ2P1', 'ANLN', 'AFF1', 'ZYG11B', 'TBCEL', 'LOC645752', 'LINC01566', 'HS3ST1', 'DNAJC1', 'PROKR2', 'WFDC5', 'GOLPH3L', 'VENTXP7', 'OGT', 'SKA3', 'OGFOD3', 'CAGE1', 'PRSS16', 'IRF9', 'LINC00606', 'AFAP1.AS1', 'FRAS1', 'PLEKHN1', 'UBE2E2', 'ARL15', 'LRRC71', 'ZNF398', 'GPR32', 'MFF', 'LTK', 'FTH1P3', 'FN3K', 'SLC34A1', 'TAS2R60', 'CFTR', 'HERC5', 'SH3BP5L', 'ENTPD7', 'MPLKIP', 'FBXL8', 'FAM45A', 'MAPT.IT1', 'VWA1', 'GPR19', 'STK32C', 'NR5A2', 'SULT1E1', 'PMM1', 'CCDC64', 'MAPK10', 'MBD3', 'CTXN2', 'PDZD4', 'CDC123', 'SPATA32', 'GABRB1', 'SLC7A13', 'ARHGEF11', 'LGALS13', 'FGF12', 'P4HTM', 'ZGRF1', 'DKK1', 'SNORD53', 'UQCC2', 'ANKRD29', 'ARPC2', 'MT1IP', 'DHRS2', 'LPP', 'ADIPOR2', 'SLC2A8', 'LOC115110', 'POF1B', 'ZNF184', 'SLC23A3', 'PRSS30P', 'CCDC106', 'LIN9', 'VRK2', 'HMG20A', 'VAPB', 'DNAJC2', 'GTPBP6', 'PAGE2B', 'TOP3B', 'FUT2', 'GRXCR2', 'SNORA46', 'MYL6B', 'PINK1', 'MAGEA12', 'FAM21C', 'KMT2A', 'GPR183', 'NBL1', 'PCDHAC2', 'OR2T2', 'POMZP3', 'CXORF57', 'CLN6', 'NLRX1', 'NFKBIZ', 'NOMO3', 'CACNG6', 'TRIM74', 'SIDT2', 'UBL3', 'HRH1', 'MSTN', 'NEK7', 'ADCY7', 'CDH15', 'CRELD1', 'SMIM12', 'FAM208B', 'UNC93A', 'MYBPHL', 'TMEM130', 'OSBPL11', 'RAB11FIP2', 'PPIE', 'NOP58', 'CYSLTR2', 'CPA2', 'GPAA1', 'KIAA1257', 'KLK3', 'ACOX2', 'OR4C45', 'PRAP1', 'PAOX', 'STK10', 'CT45A2', 'HMCN1', 'LENG8', 'ADD2', 'NCOR2', 'DHX15', 'OR2F2', 'ACOT7', 'REEP2', 'XPO5', 'EVI2A', 'PKIB', 'LOC441666', 'MAP1A', 'ZNF397', 'C2ORF15', 'COQ4', 'VAX2', 'ANXA10', 'TUBB8', 'C8ORF82', 'CHRAC1', 'POM121L10P', 'C2CD4C', 'RNASEH2A', 'IFNA7', 'DDX1', 'SAPCD2', 'PAX5', 'CSDC2', 'SUPT4H1', 'KCNH2', 'CYP4F30P', 'ADAMTS16', 'PTK7', 'RALGPS2', 'GATC', 'C20ORF202', 'TATDN2', 'TIAM1', 'MPZ', 'LINC00899', 'HRASLS2', 'FAM83B', 'LGALS8', 'LINC00482', 'SCHIP1', 'TDGF1', 'E2F2', 'LAP3', 'UBE2Q2', 'VANGL2', 'IFNK', 'FAM167A.AS1', 'C2CD2L', 'COMTD1', 'REC114', 'PAQR4', 'DCAF15', 'KRTAP19.7', 'TMED2', 'ZNF524', 'ANK2', 'TMEM168', 'CNTNAP2', 'CWC25', 'SBDSP1', 'GJA5', 'PGA3', 'IMPDH2', 'KIAA1467', 'MPZL1', 'NLRP12', 'PIDD1', 'CATSPERG', 'NDUFA3', 'ZNF688', 'INSM2', 'ABCA8', 'CHCHD2', 'MARCKS', 'CACTIN', 'ZMAT1', 'MEPCE', 'IL13RA1', 'SNORD15A', 'SRFBP1', 'EIF1AD', 'RANBP6', 'TRIM17', 'METTL5', 'UG0898H09', 'ACTR10', 'CXADRP3', 'ZNF19', 'RBMXL3', 'PKD1L3', 'ZAR1L', 'OR5M3', 'XPR1', 'NAP1L5', 'SNORD62A', 'PROP1', 'SLC35B3', 'NEO1', 'OR5AC2', 'VPS41', 'IL1RAP', 'ELP4', 'SERINC4', 'PCDHGB4', 'CKB', 'FBXO2', 'TERF2', 'WDR31', 'SGK223', 'DCAF12L2', 'LY86', 'ERICH1', 'ERICH4', 'BRWD3', 'HECTD2', 'ZP3', 'ABCA1', 'B2M', 'PIK3C2A', 'ADRA1D', 'LCE1C', 'SGCE', 'PCNP', 'TRAF2', 'AP2M1', 'RAB11FIP5', 'MYO1B', 'METTL21C', 'ELOVL3', 'RBM33', 'GPATCH2L', 'NKX2.1', 'MYRF', 'RMI2', 'NAB2', 'ENTPD2', 'LRRN1', 'GKN1', 'ADGRD1', 'TNRC6B', 'PRO0611', 'NRXN2', 'ZNF614', 'PHLDB3', 'C2ORF78', 'PRR23C', 'SAXO1', 'ASAP1.IT1', 'C11ORF70', 'LAMP3', 'FAM9B', 'SLC17A9', 'NCR2', 'RGL2', 'SNORD73A', 'ATP4B', 'ATP2A3', 'NAT10', 'OSBPL10', 'SEC11A', 'MRVI1', 'HCFC1', 'SHARPIN', 'PIEZO2', 'TMEM244', 'SFTA3', 'KLHL28', 'ITGAE', 'SPPL2B', 'OR1C1', 'PTPRE', 'CDH10', 'SNCAIP', 'HIC1', 'PLG', 'SH2D3A', 'CASP4', 'SON', 'WRB', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.6308278656706452 Spearman Correlation: 0.4982540811498837 Coefficient of Determination: -1.9881599703173047 RMSE: 0.775796978763531 NRMSE: 0.27633017943491756 MAPE: 141.6107777177809 Pearson Correlation: 0.06942868435308308 Spearman Correlation: 0.33379655596730284 Coefficient of Determination: -7.052193954480972e+25 RMSE: 5442538796892.86 NRMSE: 1313449042375.8623 MAPE: 53294238559016.97 Predictor: ElasticNet Pearson Correlation: 0.6487670904197484 Spearman Correlation: 0.5039229560317909 Coefficient of Determination: 0.402591083488932 RMSE: 0.34688219791936276 NRMSE: 0.12355554689914969 MAPE: 80.37954724713916 Pearson Correlation: 0.43431842721317354 Spearman Correlation: 0.48598860334916893 Coefficient of Determination: 0.17096613045142928 RMSE: 0.5900999072529871 NRMSE: 0.14240893579481795 MAPE: 108.89483533625639 Predictor: RandomForests Pearson Correlation: 0.5870163909504712 Spearman Correlation: 0.45593517688018154 Coefficient of Determination: 0.32557725572167107 RMSE: 0.36856345138834024 NRMSE: 0.13127816612229393 MAPE: 87.30982247106344 Pearson Correlation: 0.3510457950548703 Spearman Correlation: 0.36102405919815694 Coefficient of Determination: 0.11638119629915566 RMSE: 0.609216818305294 NRMSE: 0.14702242399432727 MAPE: 116.50014238922904 Protein: CCND1 x_train_column_count: 859 x_train columns: ['SNORD88A', 'HSD11B1', 'SDC4P', 'IFNA17', 'LINC00461', 'HCN3', 'GORAB', 'RUFY3', 'HLA.H', 'CLK4', 'GFI1', 'ZNF85', 'KCNK4', 'TNPO2', 'ARHGDIA', 'ZBTB21', 'OR4F15', 'RYR2', 'KHDC1', 'ZSWIM5', 'RIPK3', 'IFT46', 'FAM212A', 'ASZ1', 'LRRC28', 'ZC2HC1C', 'RNF185', 'C1ORF177', 'SMIM4', 'FKBP3', 'POLR3B', 'MACF1', 'LOC400736', 'NRSN2', 'ZNF182', 'PCID2', 'KDSR', 'DNAJC12', 'USP20', 'CENPL', 'BNIP3', 'WWP1', 'NMUR1', 'SLC35A4', 'GRXCR2', 'COL13A1', 'ADI1', 'TTYH1', 'CEACAM22P', 'ZNF136', 'C5ORF56', 'MRPL52', 'ZNF578', 'PDAP1', 'IRAK2', 'SQLE', 'THEM4', 'UTP15', 'RPS28', 'NSUN6', 'SAA4', 'CALN1', 'ASB6', 'TNN', 'FAM95B1', 'PHLDB2', 'KCNH2', 'PCYOX1', 'ATXN1', 'C2ORF27A', 'UMODL1', 'IZUMO1', 'ANKRD30A', 'OGFOD3', 'SERPINB7', 'DDX23', 'TRMT10C', 'ARHGAP19', 'SLC28A3', 'ANKRD19P', 'GINS4', 'EXTL1', 'LRRC19', 'CCDC53', 'PARP4', 'BSND', 'PSMB5', 'POPDC2', 'TMEM109', 'PFN1P2', 'MRM1', 'GRAMD4', 'ADARB1', 'SPHKAP', 'BICD1', 'MEOX1', 'PWP1', 'ERGIC2', 'LCMT2', 'SLCO1B3', 'RNF17', 'N4BP2L2.IT2', 'PANX1', 'ACTA2', 'PLGLB2', 'TMEM219', 'CEP162', 'UBQLN4', 'LUC7L3', 'LINC00239', 'SHOX', 'UBAP2L', 'B9D2', 'RTN4IP1', 'SNTB1', 'SNORD55', 'TGM2', 'GPER1', 'NPFFR1', 'HYLS1', 'SLC51B', 'F12', 'ATXN3', 'CSRP2', 'NDUFAF3', 'SLC5A7', 'AMHR2', 'GFRA4', 'AOC4P', 'ATCAY', 'KRTAP19.3', 'PRX', 'WDSUB1', 'ISL2', 'JTB', 'DDTL', 'PM20D2', 'SIRPB2', 'SEMA3C', 'ESYT1', 'ZNF793', 'GFRAL', 'MAP3K10', 'EVX2', 'SLC38A10', 'COG1', 'FRMPD2B', 'POLR2A', 'ZNF528', 'ARL10', 'SNURF', 'TMEM127', 'FAM192A', 'HIST2H4A', 'SUGP1', 'ZIC1', 'RALB', 'GPA33', 'PRR26', 'LTBP4', 'LINC01001', 'LINC00887', 'DPM2', 'ZNF556', 'SPRY3', 'SLAMF1', 'IFI30', 'MGEA5', 'RAD51AP1', 'EBI3', 'IQSEC3', 'SLC38A4', 'SCARNA9', 'ANKS1A', 'TAS2R1', 'EFCAB8', 'CDS2', 'XAB2', 'TUBB2A', 'RNF214', 'XIRP1', 'TEX14', 'DISP2', 'FAM117A', 'NIPAL1', 'EPX', 'MEF2BNB.MEF2B', 'PTDSS1', 'SLC5A4', 'TTLL6', 'DKFZP434H168', 'CCNE1', 'HBA2', 'A2M', 'C19ORF52', 'HPRT1', 'CD209', 'S100A13', 'TGIF2LY', 'GAS2L2', 'TTC13', 'URB1.AS1', 'TAGLN2', 'RASL12', 'CFAP52', 'ZMYND8', 'PLEKHA5', 'ARHGAP26', 'LINC00152', 'CRYGD', 'STK24', 'TMEM229B', 'NLGN4X', 'LOH12CR1', 'CAND1', 'PPP1CC', 'DNAAF3', 'DNAJC3', 'PTRF', 'C15ORF56', 'CYP46A1', 'RGS20', 'STK26', 'TOMM40', 'MAPKBP1', 'BMF', 'INTS4P2', 'FRMPD1', 'TBCCD1', 'ZNF33B', 'PSMA7', 'TRIM25', 'PPWD1', 'SNORD116.1', 'SOCS7', 'SNAR.H', 'VPS13C', 'KIF13A', 'KIN', 'WAS', 'ITPRIP', 'MCUR1', 'NAGLU', 'GPAA1', 'LSM5', 'H2BFWT', 'FOXS1', 'KRTAP1.1', 'USP39', 'TTC5', 'IMP4', 'RNF31', 'IL27', 'RBL1', 'C9ORF43', 'ZIC3', 'RBM15B', 'QSOX2', 'CD24', 'SCN5A', 'RCN2', 'SPATA7', 'SEC24A', 'TAPT1', 'EMILIN2', 'SNORD116.11', 'SNORD116.27', 'FBXO31', 'ACVR1C', 'TMEM184B', 'ASH1L', 'SLC17A7', 'GDE1', 'CUL7', 'IFNL1', 'VN1R1', 'ABT1', 'IGLL1', 'DDX11', 'ACBD5', 'TMEM60', 'METTL7B', 'TIMM10', 'BRPF1', 'MMP15', 'CNR2', 'MAP7D2', 'SNRNP40', 'ARMC8', 'IFNA8', 'PLIN5', 'PCDHGB5', 'GAD1', 'JADE2', 'PRDM2', 'TRMT2B', 'FAM13C', 'CANX', 'MYLPF', 'FAM150A', 'STX16', 'OR52E2', 'CCDC54', 'MGMT', 'CYLC1', 'GJC3', 'TSC2', 'POU1F1', 'OR4D5', 'CYHR1', 'SLC9A4', 'DBIL5P', 'FBLN7', 'NTN4', 'LDHAL6B', 'CCDC40', 'CCL2', 'SNORD77', 'INE1', 'ATP1A1.AS1', 'CP', 'NUAK1', 'GPR161', 'F2R', 'UBXN6', 'GYPA', 'IFNA16', 'SMYD1', 'SNORD126', 'SRBD1', 'TFCP2L1', 'ALG11', 'MFSD6L', 'AK8', 'VSIG10L', 'SCARNA15', 'CRYGS', 'IGSF9B', 'CCNH', 'EPB41L4A.AS1', 'LINC00303', 'ABCB6', 'CEP104', 'TMEM199', 'TMEM141', 'CDH20', 'RXRG', 'USP6NL', 'LILRB2', 'WDR90', 'GPRASP1', 'NUP107', 'TOLLIP', 'CTDSP2', 'SPRR2F', 'CGB2', 'CPN1', 'SF3B5', 'DOC2A', 'ATP7B', 'RBM4B', 'XRN2', 'RPA3', 'LPPR1', 'CWH43', 'NAA40', 'MMS22L', 'LRRC6', 'PWP2', 'TMUB2', 'OR9Q1', 'RELB', 'KIF14', 'ZSCAN18', 'UVSSA', 'SPINT3', 'CDH11', 'SPAG5', 'H1FX', 'RPN2', 'PIK3R2', 'COA4', 'CHM', 'KLF1', 'RAMP2.AS1', 'ITFG1', 'CLSPN', 'CHODL', 'NACAD', 'CDS1', 'TLR2', 'DANCR', 'TTC14', 'MIXL1', 'C3ORF35', 'ZSCAN12', 'WIPF1', 'KIAA1804', 'KCNQ1OT1', 'SNAP25', 'LLGL2', 'TMEM121', 'SORBS3', 'SUPT20H', 'C12ORF75', 'SIX1', 'SNORA81', 'ADAD1', 'SLC11A2', 'SYTL1', 'SFTPB', 'SCNN1A', 'MRPS22', 'GNB2', 'RAB37', 'KLHL15', 'SAMD8', 'CDH22', 'GTPBP2', 'DDX12P', 'AMZ1', 'CECR5', 'IPO4', 'DZIP1L', 'CRISPLD1', 'ALDH3B2', 'CATSPER1', 'ZNF287', 'LRCH3', 'C17ORF102', 'PDE4DIP', 'DAP', 'SNORD116.12', 'ARSD', 'CITED1', 'SORBS1', 'PROC', 'PRRG4', 'DAB2', 'HNRNPA1P33', 'GOLGA6L6', 'KLKP1', 'COL20A1', 'HIST1H3J', 'GP2', 'MRE11A', 'GSTM2', 'SNRNP70', 'AGAP4', 'PABPC1L2B', 'HNF4G', 'ZSCAN31', 'BCL10', 'BPIFB2', 'C7ORF61', 'RADIL', 'PDE6G', 'RFPL3S', 'LINC00634', 'FOXI3', 'SERP2', 'KCNT1', 'NAPRT', 'TMLHE', 'IFIT5', 'GNPNAT1', 'C7', 'NUDCD3', 'CTAGE6', 'PIGQ', 'RPL3L', 'NAALADL1', 'COX17', 'NSA2', 'CCRL2', 'PRSS3P2', 'SNORD71', 'CDC42BPB', 'DNAH5', 'SQRDL', 'SOAT1', 'KLF4', 'PPP1R3A', 'SYNC', 'INTS4P1', 'IL10', 'ABHD3', 'RNF13', 'GAL3ST1', 'FAM201A', 'FBF1', 'NCKAP1L', 'SNORA71A', 'LCN8', 'IGFBP4', 'SNAR.C3', 'LARP6', 'ZNF416', 'RENBP', 'IBSP', 'TMEM179B', 'DIXDC1', 'UNC5B', 'DTX2', 'RPRD1A', 'IFITM5', 'C1ORF123', 'TACC2', 'TXNDC12', 'PSD2', 'STARD5', 'MTOR', 'WBP4', 'ANKS6', 'HYI', 'LOC100128573', 'ZBTB25', 'SIRPG', 'MESTIT1', 'SUPT5H', 'YLPM1', 'NKAPP1', 'TUBE1', 'CCHCR1', 'ANKRD10', 'PAX9', 'HMMR', 'RHOBTB1', 'CLK1', 'LOC284023', 'LINC00597', 'PIGY', 'ARHGAP33', 'EIF4A1', 'KRT80', 'OR4F6', 'HIRIP3', 'DIRAS2', 'MTTP', 'LIPT1', 'ABCC1', 'THOC6', 'TAMM41', 'CDC42SE1', 'RAB1A', 'HOXB7', 'OIP5', 'DGAT2', 'LY6G5C', 'LILRA5', 'PI4KB', 'MMRN1', 'PCDHA13', 'ATF3', 'DYRK2', 'DLEC1', 'PSG11', 'AGAP2', 'RAB3C', 'C8ORF22', 'FNDC5', 'HIST1H3I', 'HPCA', 'OR14J1', 'SNORD4A', 'LSR', 'SDHAF1', 'ZNF177', 'CAPS2', 'SNORD90', 'SPTSSA', 'RSBN1L', 'STOML1', 'CANT1', 'FOS', 'OR8J3', 'PCDH18', 'PAXIP1.AS2', 'OLFM1', 'DOK6', 'CYTH4', 'CTRB2', 'ADGRF1', 'CCDC96', 'LIMD2', 'GNAI2', 'COMMD2', 'NUDT8', 'OR5A1', 'OR6C4', 'OSGIN1', 'PTGR1', 'HOMER2', 'MAGEB10', 'HTR2C', 'HIP1R', 'ANGPTL1', 'TMEM89', 'HCG9', 'GOSR2', 'SLC13A1', 'ZNF804B', 'OSBPL8', 'ERO1LB', 'SLC17A9', 'DPYSL3', 'OR5K4', 'ARID4A', 'PRADC1', 'ADGRD1', 'MS4A10', 'WBP1', 'GDF15', 'GSG1L', 'NUTM2F', 'THEG', 'CROT', 'ANP32A', 'C11ORF86', 'FAM168B', 'BHLHE22', 'VHL', 'NSUN2', 'SNX17', 'RAB33B', 'SLC10A5', 'ELF1', 'ZNF324B', 'TMEM207', 'POLR3A', 'BIN2', 'TFR2', 'VSIG10', 'CAPN6', 'PCDH1', 'UBE2D1', 'OR4K15', 'INSR', 'ASGR2', 'UCN3', 'OR2Y1', 'SNAPC5', 'METTL5', 'TCHP', 'CCDC88A', 'DHODH', 'FAM83F', 'CPD', 'NAA11', 'CXORF65', 'TXLNGY', 'AKNAD1', 'PQLC3', 'FAM183CP', 'ATXN8OS', 'LINC00593', 'GABRA4', 'NPHS1', 'RBBP6', 'KRT40', 'POMC', 'GAR1', 'CEP41', 'GALNT18', 'ORC3', 'CNOT8', 'GBP3', 'SBNO2', 'PMCHL1', 'KRTAP13.4', 'BSG', 'SRP72', 'HCG4B', 'AGO3', 'ZNF44', 'SUN5', 'ADCY8', 'RAB22A', 'NDC1', 'COLEC11', 'SELENBP1', 'SMAD5.AS1', 'ADPRHL1', 'CCNB1', 'KIF22', 'DNASE1L1', 'SNX32', 'THBS2', 'MSN', 'PPFIA3', 'IER5L', 'HNRNPL', 'RARS', 'CFAP126', 'PTP4A3', 'ZNF653', 'CTPS2', 'C21ORF91', 'KRTAP19.1', 'SUMF1', 'SSPO', 'RNY5', 'PPM1G', 'ISY1', 'BCKDHA', 'MDC1', 'SLC11A1', 'DOK7', 'OR5T3', 'RIT2', 'RNF125', 'ARHGEF39', 'C9ORF40', 'LINC00470', 'KRT1', 'CACNG2', 'EN2', 'NPEPPS', 'PALM2.AKAP2', 'TOM1L2', 'MOXD1', 'SNORD114.4', 'CACTIN', 'PACRG', 'TCTE1', 'CYFIP1', 'SPESP1', 'SLC25A42', 'MYL10', 'SH3RF1', 'CLDN25', 'PRR7', 'RBM11', 'TCEAL6', 'LAIR1', 'GAB1', 'VN1R2', 'MAP6', 'SOX30', 'RAB5B', 'SNORD116.24', 'ACADL', 'CHI3L1', 'DBF4B', 'TEN1', 'BMP15', 'BIN1', 'SNORD80', 'LINC00202.1', 'PRPF18', 'KLF7', 'MAPK10', 'VEPH1', 'SNAR.G2', 'VTI1A', 'NTAN1', 'ADRA2B', 'ZNF492', 'WDR35', 'PLAUR', 'ARHGEF5', 'RAET1G', 'PCGF1', 'ATAT1', 'ZNF879', 'PSKH1', 'SNORD38A', 'AP3M1', 'MLXIP', 'INSRR', 'GRM3', 'MGAT4A', 'KHDC1L', 'BDP1', 'LOC646762', 'LRGUK', 'ESRP2', 'GPX6', 'LGALS3BP', 'MKKS', 'APOF', 'GOLT1A', 'KCTD2', 'CEP57', 'TRIM42', 'SLC25A51P1', 'ADAMTS10', 'FAM171A2', 'OR4K1', 'IGFBP6', 'EID2B', 'MBNL1.AS1', 'ATP6V0C', 'PNPLA6', 'LIMK1', 'FBXL15', 'NAGK', 'EPC2', 'RNASE6', 'WDR11', 'EFS', 'DLL1', 'OR2T33', 'PTPRVP', 'BCL7C', 'MYO15A', 'UBFD1', 'CPA1', 'NRP2', 'BPHL', 'C12ORF76', 'C10ORF67', 'PLEKHG1', 'CATSPERB', 'LRFN4', 'IMP3', 'CBLN1', 'P2RY11', 'PRPF38A', 'PRAMEF10', 'RNF4', 'ADAM23', 'TRA2A', 'GREB1', 'DEAF1', 'BNC2', 'BCLAF1', 'ARHGEF40', 'ZBTB40', 'PPBPP1', 'SYNPO2', 'G2E3', 'GPM6A', 'NUPR1L', 'CHD3', 'ERC2.IT1', 'SCARB2', 'ANKEF1', 'RELL2', 'RWDD4', 'FBLN2', 'IKZF3', 'DOCK7', 'HHLA3', 'TRPM7', 'ZNF660', 'CD52', 'TCEAL4', 'TOPORS', 'FZD8', 'PREX2', 'RIMKLA', 'SERTAD1', 'UGT2A3', 'NRXN2', 'SSR3', 'SNHG12', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.8145659973355851 Spearman Correlation: 0.7731052879856393 Coefficient of Determination: 0.6403266776410879 RMSE: 0.13650928220096242 NRMSE: 0.08598035007114936 MAPE: 338.1216722390346 Pearson Correlation: 0.032060170880838804 Spearman Correlation: 0.03949704732374522 Coefficient of Determination: -1.456938809633144e+24 RMSE: 333092712278.11926 NRMSE: 212808878162.89035 MAPE: 94121993831483.33 Predictor: ElasticNet Pearson Correlation: 0.4174930481464212 Spearman Correlation: 0.4320159883551238 Coefficient of Determination: 0.11854004848882138 RMSE: 0.21370238169270098 NRMSE: 0.1346004117282456 MAPE: 672.2580371284812 Pearson Correlation: 0.2642228869262641 Spearman Correlation: 0.26603074851307373 Coefficient of Determination: 0.05176318096122623 RMSE: 0.2687217889710689 NRMSE: 0.17168307903749563 MAPE: 263.8995859117677 Predictor: RandomForests Pearson Correlation: 0.47550484092419165 Spearman Correlation: 0.4363241403687237 Coefficient of Determination: 0.13103828112622085 RMSE: 0.21218192833107408 NRMSE: 0.1336427544159239 MAPE: 665.6796644733871 Pearson Correlation: 0.2064142645367833 Spearman Correlation: 0.19313256557514782 Coefficient of Determination: 0.030392303453405378 RMSE: 0.2717330740744185 NRMSE: 0.17360695242484667 MAPE: 269.8407612483397 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['PABPC4L', 'OSR1', 'LRRC2', 'SUSD5', 'UBE2V2', 'SMAD1', 'STK32C', 'CYP19A1', 'MYO18B', 'C10ORF25', 'KCNE5', 'DMXL2', 'MS4A3', 'FAM27C', 'CD200', 'C2ORF49', 'ASGR1', 'CCT3', 'ATMIN', 'RECK', 'TRA2A', 'FAM43B', 'CDC42BPA', 'FUOM', 'TNFRSF17', 'CDH15', 'SPTLC1', 'C9ORF40', 'SYNE1', 'ENG', 'RPS25', 'NQO2', 'SYNM', 'OR10A4', 'SNRNP70', 'THRSP', 'FAM186A', 'CDK15', 'TMEM170B', 'SLFN14', 'EPB41L4A.AS2', 'ALOX5AP', 'IFNGR1', 'CCNB1IP1', 'PIEZO2', 'GSTZ1', 'GDNF', 'SRP9', 'ZNF484', 'JMY', 'RNF115', 'AKAP6', 'RHOU', 'ARMC7', 'LPAR6', 'ANGPTL5', 'ACAN', 'AGAP2.AS1', 'PAXIP1', 'NKAIN2', 'MICALCL', 'FLT3LG', 'MCEMP1', 'BPIFB3', 'AKAP3', 'LIPA', 'EPB41L2', 'EPHB3', 'NCOR1', 'SPA17', 'TAF2', 'ZC3H12D', 'ZNF10', 'ATP6V1C2', 'ERC2', 'SPIN2B', 'RASGEF1A', 'GRIK1.AS1', 'DENND1B', 'PPCDC', 'VPS28', 'TCEB3B', 'MAGEB18', 'ACBD5', 'SNORD115.38', 'TXNDC11', 'NDNF', 'DYNLT3', 'SLC39A2', 'ZNF529', 'SNHG5', 'ZC3H12A', 'SLC26A4.AS1', 'ZEB1', 'LBX1', 'P4HA1', 'ATXN10', 'SGSM2', 'HERPUD2', 'ADORA2B', 'MOS', 'KIAA1429', 'DDX53', 'WSB2', 'LDHA', 'ZNF429', 'OTOA', 'VPS26B', 'GGACT', 'CCDC64', 'DPCD', 'NPS', 'OR6C2', 'LPA', 'TOX2', 'VDAC2', 'FAM27B', 'PPIP5K2', 'CNOT7', 'LGALS3BP', 'CLCA4', 'TTYH3', 'CMA1', 'KLHL12', 'TP53I11', 'TAS2R39', 'BSND', 'TOM1', 'PON2', 'KLRC1', 'DKFZP434A062', 'MSX2P1', 'MFI2', 'TEX26', 'NUP153', 'ZNF273', 'TMEM119', 'ZSCAN4', 'C10ORF128', 'CCL15.CCL14', 'MALAT1', 'MAGI2', 'SLC22A18', 'UTF1', 'GKN2', 'TNFRSF11B', 'TTLL9', 'SNORD114.10', 'LINC00608', 'PEPD', 'CLRN1.AS1', 'CD8B', 'C20ORF24', 'MGAT4C', 'LOC727896', 'LINC00661', 'GTF2A1L', 'PCDHA2', 'BID', 'AOC2', 'ACY1', 'GUCA1C', 'GLI2', 'CDC6', 'C10ORF95', 'ACTA2', 'DCLRE1C', 'MAPK8IP1', 'FGF20', 'ABI2', 'CCDC113', 'HSPA5', 'VPS4A', 'CLEC10A', 'FAM200A', 'SNORD15A', 'ANP32C', 'RXFP4', 'NOVA2', 'SLC7A10', 'HOXA9', 'OR4C16', 'SLITRK5', 'ZSWIM5', 'SNORD116.10', 'LEUTX', 'CDKL4', 'PTPN2', 'LIX1', 'LEFTY1', 'UIMC1', 'ZFAND3', 'RCCD1', 'RPL41', 'TK2', 'ATP6V1D', 'MFSD4', 'ALG10', 'MYCN', 'NDUFV1', 'NFYC.AS1', 'FAM155A', 'PIP5K1A', 'CNTF', 'CFLAR', 'LINC00493', 'ZNF561', 'OR5M1', 'ERN1', 'C14ORF39', 'CADM4', 'ID2', 'LYN', 'EPHX2', 'ATP11C', 'BRPF1', 'USP7', 'PRR15', 'AIF1L', 'APRT', 'ADAM12', 'SLC46A1', 'EHD4', 'GBP7', 'IL13RA1', 'TRIM32', 'ADAMTSL2', 'TMPRSS4', 'ORM1', 'MPPE1', 'CALHM3', 'NID2', 'GPX6', 'UBALD2', 'MYO1F', 'PSMB5', 'CCR7', 'PRMT5', 'GPRASP2', 'COX4I1', 'TPTE2P6', 'OR13C2', 'LRGUK', 'TM9SF2', 'ZCCHC10', 'TNFAIP8L2', 'DDC', 'RAD51D', 'ST8SIA6', 'MAOB', 'GTF2IP1', 'USP18', 'TMEM69', 'CALCA', 'NBEAL1', 'GLA', 'COMP', 'AGAP2', 'HRSP12', 'RBM42', 'PYDC1', 'INCA1', 'CARD11', 'MXD4', 'TARP', 'FUBP1', 'RXFP2', 'NLRP8', 'HIATL2', 'SNAP23', 'FAM225A', 'SMPD3', 'BMP15', 'CENPU', 'TMEM106C', 'CHKA', 'MBTPS2', 'RPIA', 'KANSL2', 'CT83', 'UBE2F', 'BUD13', 'GIPC1', 'SNORD114.27', 'TP53I3', 'PMCHL1', 'TCHHL1', 'IZUMO2', 'TFF1', 'MYLIP', 'MORN2', 'NDUFS5', 'IMMT', 'KAT7', 'RAB11FIP1', 'SLC25A12', 'FAM49A', 'CPSF1', 'GRB2', 'CCDC130', 'TSPAN12', 'GPATCH4', 'C14ORF119', 'KPNA7', 'TTL', 'PLEK', 'PHYHIP', 'ABCB5', 'PACRGL', 'KRT78', 'CST6', 'TSPAN18', 'FLJ36777', 'C9ORF114', 'SORT1', 'DZIP1', 'C4ORF3', 'CCDC167', 'SIX6', 'GVINP1', 'FUT8', 'ABHD16A', 'POSTN', 'PEX11G', 'PDHB', 'CHRNA10', 'ZNF778', 'DNASE2', 'KLK3', 'ACTR3B', 'SCAF4', 'SNORD90', 'OR10A7', 'WDR90', 'SNORD50A', 'AES', 'SNORD65', 'TMTC3', 'DNAJB13', 'GNLY', 'HNRNPA3', 'OR8I2', 'PADI3', 'HSPBAP1', 'TRIOBP', 'KHSRP', 'NAALADL1', 'HNRNPD', 'IL18RAP', 'TIMP2', 'NBEAP1', 'DIMT1', 'ATPIF1', 'KIAA0753', 'TAS2R46', 'OR5B17', 'CCT7', 'TPRG1', 'PARD3', 'CALM2', 'REXO2', 'OR6P1', 'MDM2', 'LINC00160', 'PADI6', 'PCDH8', 'IQCF5', 'ADAM18', 'LPCAT3', 'RABL2B', 'B9D2', 'ATG12', 'RTP1', 'C3ORF33', 'WWOX', 'TPM3P9', 'SYS1', 'NCMAP', 'KIAA1919', 'OR6C76', 'KCNG3', 'CPSF4', 'LOC340017', 'TYMSOS', 'LIN28A', 'OR6M1', 'PIK3C2B', 'GNAQ', 'UBE2I', 'MFSD2B', 'CARD9', 'HMSD', 'CAP2', 'DUSP5', 'ARID5A', 'LINC00052', 'OR6V1', 'PCSK1', 'IL16', 'PAX7', 'RAB3C', 'PRY2', 'LINC00598', 'HSDL1', 'RPL24', 'MRPS12', 'COPS6', 'L3MBTL3', 'FGF7', 'CHCHD6', 'ZNF613', 'TUBA3FP', 'R3HDM4', 'ATP5O', 'ADAMTS7', 'MIR7.3HG', 'SPDYE3', 'PTPN5', 'PARG', 'RQCD1', 'PRMT7', 'CAPN5', 'ZDHHC8P1', 'TXNDC5', 'MIAT', 'PLCB2', 'SLC5A1', 'TMEM123', 'ZNF461', 'WDR18', 'SYNJ1', 'ARL5A', 'GLMN', 'ARGFXP2', 'FMR1', 'TP53INP1', 'NET1', 'PDPK1', 'KHDRBS1', 'ICA1', 'SNAR.H', 'ADAM5', 'MTHFD1L', 'FSTL1', 'BTK', 'OR51I2', 'HES5', 'MEPE', 'SDR16C6P', 'PDGFD', 'ETS1', 'NDRG3', 'RHBDD1', 'SNORD116.13', 'TERF2', 'ODF4', 'PIK3C2G', 'PCGEM1', 'CYB561', 'MRGPRX4', 'DGKA', 'GPATCH2', 'PRG2', 'THBS3', 'DEFA6', 'GFER', 'KRTAP12.4', 'IL4I1', 'PAXIP1.AS2', 'LURAP1L', 'ATP2A1', 'LINC00634', 'CYP27B1', 'PCDH1', 'S1PR4', 'ZNF800', 'PHLDB1', 'LMO2', 'PRAMEF6', 'CCKBR', 'SNORA41', 'MRAP', 'GABRA2', 'MAPT.AS1', 'CSF3', 'CXCL2', 'CFL1P1', 'UGT1A9', 'FAM181B', 'SESN3', 'CIPC', 'UBE2E3', 'SPTAN1', 'ZNF676', 'FBLIM1', 'FAM170B', 'KIAA0586', 'PDE4DIP', 'PRR30', 'C3AR1', 'ZBTB9', 'CFAP57', 'CRIP3', 'LIMCH1', 'KIAA0195', 'CPLX3', 'METTL13', 'GPR65', 'THEG', 'AKR1C8P', 'ACOT9', 'RGPD6', 'SCAF8', 'SFXN2', 'DPP4', 'C12ORF43', 'KPRP', 'IFFO1', 'DNAH3', 'PCID2', 'CAB39L', 'HPN.AS1', 'LYZ', 'CITED4', 'LAMA5', 'MYO6', 'PMEPA1', 'TUBA1A', 'TRIM40', 'BCCIP', 'MED13', 'OMP', 'MEIG1', 'ZNF133', 'SGK494', 'FAM99A', 'CPEB1', 'SCGB1C1', 'GNMT', 'NEUROD4', 'OR10C1', 'PPP1CB', 'CTRB2', 'CLDN5', 'SLC30A9', 'GCN1L1', 'ZNF347', 'PTPRH', 'FAT2', 'EPB41L3', 'WDR72', 'EAF1', 'TNF', 'DCUN1D2', 'TEAD1', 'POLA2', 'MZT2B', 'SLC1A4', 'LSS', 'SNORA61', 'FAM95B1', 'HGS', 'PHGDH', 'KIAA1456', 'ANXA7', 'TRIM60', 'ROBO1', 'KIAA0895', 'PRR20D', 'NAT8L', 'CYFIP1', 'ACER1', 'TAAR2', 'IRX1', 'PSG8', 'TMCO1', 'OR2J2', 'PGM1', 'ABCA4', 'LCE3A', 'FAM92A1', 'RNF7', 'SLC4A11', 'CA7', 'SNORD11', 'P2RX7', 'HIST1H2AL', 'LEPROT', 'SMYD2', 'TAS2R8', 'BICD2', 'ZNF644', 'KRTAP13.4', 'SIN3A', 'BCL2', 'SHC1', 'MAN2B2', 'PUS7', 'TPD52L2', 'ANKRD53', 'CLEC4C', 'CNIH3', 'ROBO4', 'BTBD7', 'GALNT5', 'EFHD1', 'SPAG16', 'NPR2', 'STX4', 'RPN1', 'ZNF295.AS1', 'PCDH11Y', 'USO1', 'SLC22A16', 'RPL35', 'SIRPB2', 'SLC17A8', 'SNORA68', 'CABP5', 'ANXA13', 'DNAJB14', 'PLEKHG4', 'CHRM4', 'ADAMDEC1', 'TAF11', 'OR13C4', 'COL9A3', 'FXYD3', 'CLTA', 'GNGT1', 'RASSF9', 'ASTE1', 'RYK', 'HES1', 'ZXDB', 'OR1A1', 'ZCCHC8', 'TLR2', 'RPL13AP20', 'KRTAP13.2', 'C3ORF22', 'SNORD27', 'CXADR', 'AFG3L2', 'ZNF236', 'C15ORF57', 'RBM41', 'STRADB', 'LINGO3', 'NUB1', 'ZNF350', 'CIB4', 'METTL23', 'CASC8', 'NPY2R', 'ETFB', 'RARA', 'BRCA2', 'SGSH', 'SLC38A5', 'COX10', 'RAB17', 'BEND3P3', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.7978670419095277 Spearman Correlation: 0.6761186656258936 Coefficient of Determination: 0.6313387153105866 RMSE: 0.6241273628612344 NRMSE: 0.10633036830864173 MAPE: 659.8141615993746 Pearson Correlation: 0.07595944649693895 Spearman Correlation: 0.26593045160699 Coefficient of Determination: -1.9158787727118754e+24 RMSE: 1201057391799.8599 NRMSE: 265750059033.04788 MAPE: 111912699547524.48 Predictor: ElasticNet Pearson Correlation: 0.6874284521618759 Spearman Correlation: 0.6087039580343041 Coefficient of Determination: 0.4487184190002893 RMSE: 0.7632137717686795 NRMSE: 0.13002602718515077 MAPE: 1110.1685013673923 Pearson Correlation: 0.42713584837787866 Spearman Correlation: 0.35962792553523115 Coefficient of Determination: 0.13581399770198355 RMSE: 0.8066466998312495 NRMSE: 0.17848140277270705 MAPE: 541.2197511328013 Predictor: RandomForests Pearson Correlation: 0.5796948276996527 Spearman Correlation: 0.5227187981807309 Coefficient of Determination: 0.20516777339661896 RMSE: 0.9164255542037917 NRMSE: 0.15612817592105077 MAPE: 648.6133056753024 Pearson Correlation: 0.4672692865015817 Spearman Correlation: 0.4583473609396626 Coefficient of Determination: 0.1523321755594016 RMSE: 0.7989003232922425 NRMSE: 0.17676741305282498 MAPE: 457.8005851970591 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['UROD', 'PLP1', 'NWD1', 'TMC5', 'MDP1', 'AMELX', 'NSMCE1', 'HIST1H2BD', 'RCVRN', 'KRTAP4.4', 'F13A1', 'G0S2', 'LRRTM4', 'IZUMO1', 'GUCY1A2', 'C1ORF174', 'CHN2', 'SLC2A7', 'MDH1', 'RLTPR', 'GPATCH2L', 'SUSD2', 'CCDC130', 'IL12RB1', 'SUGCT', 'KLHL26', 'LEAP2', 'INTS12', 'PCBD1', 'MAPKAPK3', 'PCDHB15', 'SYCE3', 'ROBO2', 'PAX1', 'FAM83G', 'TRAPPC10', 'BPIFA1', 'YIPF1', 'AEBP2', 'CTPS2', 'NT5DC3', 'CENPBD1P1', 'BTG2', 'TP53I13', 'PCED1B', 'NIF3L1', 'GBA2', 'CFAP20', 'PLA2G16', 'FOXI1', 'DVL3', 'OR52L1', 'LOC100133331', 'SNRNP48', 'PLAC8L1', 'SLC46A3', 'DDRGK1', 'CHML', 'ALG8', 'C7ORF57', 'FAM178B', 'GLRX3', 'CDK1', 'RAD1', 'ATG12', 'KRTAP9.4', 'ATXN10', 'ZNF781', 'ZCCHC24', 'LINC00636', 'ANKRD20A3', 'RAB8A', 'GOPC', 'FASTKD2', 'BRD7P3', 'PPFIA2', 'STOML1', 'PEBP1', 'MED6', 'ARHGEF26', 'RWDD3', 'DEPDC4', 'ERP44', 'SLC22A15', 'LCE1F', 'VHL', 'DHX32', 'TTLL9', 'AGBL4', 'KLHDC7B', 'RPL28', 'PRKAA2', 'KRTAP6.3', 'HNRNPDL', 'FILIP1', 'ZFP82', 'FMO2', 'CMSS1', 'PLA2G6', 'MTFR1', 'SEC24A', 'RNASE10', 'RBBP8', 'AP3M2', 'IRX2', 'FKRP', 'LOC221122', 'FAHD2A', 'MAST4', 'ANAPC2', 'RRP7BP', 'COX7C', 'HS6ST3', 'WIBG', 'CPNE6', 'CA13', 'ZC3H3', 'B4GALNT3', 'BOK', 'ELAC1', 'CELSR3', 'CD8B', 'CACNB3', 'GOLGA8B', 'CT45A6', 'LINC00667', 'AUTS2', 'CDH12', 'TMEM87B', 'BIRC8', 'KCNAB3', 'NR2E3', 'ACOX3', 'USP14', 'NARF', 'RFX6', 'SLFN12', 'TRMT2B', 'ZNHIT3', 'ZNF665', 'SYF2', 'PANK4', 'TMEM147', 'TMEM145', 'ICAM2', 'HRK', 'TMEM2', 'C16ORF78', 'FRG2C', 'BEST1', 'EIF2S3', 'CD27', 'CDKN2A.AS1', 'RAB11FIP4', 'C11ORF87', 'POLR1C', 'RC3H2', 'SYCN', 'TMEM207', 'TUBB4A', 'VSIG2', 'TSC2', 'IL16', 'CHTF18', 'PKNOX1', 'CEACAM22P', 'TLR9', 'ATP6V1E2', 'RALB', 'SLC30A9', 'CDIPT', 'DHRS9', 'GPHB5', 'AFF4', 'SMARCD3', 'FGF3', 'ARHGEF35', 'SGMS1', 'SNX16', 'ATP6V0D1', 'LRRC75A.AS1', 'DHRS7', 'HPCAL4', 'FAM217B', 'ALDH1A3', 'MYO5A', 'MYL3', 'BCORP1', 'RGL3', 'VILL', 'EIF4B', 'FAM185A', 'TMEM126A', 'MOGAT3', 'ZNF843', 'EEF1E1', 'KCNAB2', 'ARL13B', 'KLK5', 'SERPINA9', 'MPLKIP', 'RBX1', 'ULK4', 'RGL2', 'SPIRE2', 'SOD3', 'SNORA45A', 'B3GNTL1', 'SLC4A5', 'SEC16B', 'ECHS1', 'WDR45B', 'SNX1', 'CEP162', 'RXRB', 'PCDHB12', 'BRCC3', 'DMRTC1B', 'PRRT1', 'ZNF157', 'EEFSEC', 'GBP4', 'EEF1A2', 'FBXO3', 'PCNX', 'DUSP6', 'TFRC', 'WFDC6', 'ING1', 'FAM188B', 'LOC728392', 'MSMB', 'EYA3', 'ZMYND10', 'SGK1', 'LHX2', 'TBC1D23', 'VNN2', 'USP6NL', 'SLCO4C1', 'EPB41L1', 'C10ORF71', 'DEFA6', 'TLX2', 'FLJ16779', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.49056595657618934 Spearman Correlation: 0.46869720442371904 Coefficient of Determination: 0.1960686989515329 RMSE: 0.42043528665404706 NRMSE: 0.11346341669317173 MAPE: 217.62604912689895 Pearson Correlation: -0.10872738521745706 Spearman Correlation: 0.13546277762065334 Coefficient of Determination: -1.8959643117346937e+25 RMSE: 1815596412430.8887 NRMSE: 878440717438.6448 MAPE: 50622396229895.29 Predictor: ElasticNet Pearson Correlation: 0.34738098408118384 Spearman Correlation: 0.36143218089464946 Coefficient of Determination: 0.10645496278776623 RMSE: 0.4432491517320241 NRMSE: 0.11962022408278143 MAPE: 230.71296594742554 Pearson Correlation: 0.40886099530063114 Spearman Correlation: 0.4107063812599126 Coefficient of Determination: 0.07707044105116223 RMSE: 0.400579310374408 NRMSE: 0.19381244333107933 MAPE: 237.45958988930104 Predictor: RandomForests Pearson Correlation: 0.4263287317483146 Spearman Correlation: 0.37461852885823604 Coefficient of Determination: 0.11389930426529704 RMSE: 0.4413988815534875 NRMSE: 0.11912088926735002 MAPE: 232.62260165728455 Pearson Correlation: 0.3855340305174493 Spearman Correlation: 0.36606058491912075 Coefficient of Determination: 0.03743554742720012 RMSE: 0.40909026645617297 NRMSE: 0.19793030251793703 MAPE: 239.95162894628734
Unnormalized
random_genes.clear()
scenario = Scenario.NRandomGenes_Mutations
normalizeTechnique = NormalizeTechnique.UN
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 10.7401 | 141.1933 | 314.4482 | 0.0000 | 0.0 | 0.000 | 2.9988 | 9.4249 | 0.0 | 0.0000 | ... | 74.1138 | 533.3625 | 1053.4444 | 94.6772 | 881.2262 | 5343.4779 | 934.3482 | 508.0867 | 52.2652 | 0.8568 |
| TCGA-A1-A0SH-01 | 3.0048 | 79.8003 | 95.7054 | 0.0000 | 0.0 | 0.000 | 0.3612 | 3.9727 | 0.0 | 0.0000 | ... | 87.7601 | 581.0946 | 801.3977 | 19.8634 | 1353.2389 | 5464.9614 | 1312.7898 | 1001.1151 | 455.7746 | 0.0000 |
| TCGA-A1-A0SJ-01 | 4.9419 | 134.8733 | 63.6488 | 0.3658 | 0.0 | 0.000 | 0.3658 | 4.7554 | 0.0 | 0.7316 | ... | 83.7677 | 2731.4129 | 834.3850 | 51.2117 | 1092.6383 | 3032.0988 | 958.3905 | 718.7929 | 43.5299 | 0.0000 |
| TCGA-A1-A0SK-01 | 28.8560 | 1119.1932 | 166.7192 | 0.3152 | 0.0 | 1.891 | 0.0000 | 3.4668 | 0.0 | 0.0000 | ... | 69.0199 | 610.1481 | 1775.6067 | 158.5251 | 1380.7123 | 591.2386 | 1798.9285 | 1335.6445 | 49.4800 | 0.0000 |
| TCGA-A1-A0SQ-01 | 1.0368 | 41.5532 | 75.8447 | 0.0000 | 0.0 | 0.000 | 0.4034 | 5.6480 | 0.0 | 0.0000 | ... | 106.1019 | 617.2466 | 875.0378 | 25.4160 | 969.4402 | 2903.0761 | 715.6833 | 691.4776 | 17.7509 | 0.0000 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 371 x_train columns: ['TBC1D13', 'STX10', 'GPIHBP1', 'RIPPLY1', 'C1QBP', 'C16ORF70', 'DPAGT1', 'SLC25A52', 'CSRNP3', 'SMTN', 'PGM2', 'LIX1', 'GTF3C5', 'NFE2L3P2', 'LOC148413', 'FHIT', 'RNF212', 'LY6G5B', 'MRPL39', 'KLHDC4', 'CEP85L', 'PDHA2', 'GZMA', 'ANXA7', 'PHF21A', 'PDK4', 'YAE1D1', 'SLC27A4', 'CLCN6', 'CEP89', 'TSSC4', 'BTNL9', 'SOGA1', 'GABARAPL3', 'TYK2', 'C4ORF3', 'FAM186B', 'PSMA7', 'GUCY2GP', 'SNORD114-14', 'RNFT1', 'ZNF586', 'LRRC23', 'SNORD115-8', 'EIF4EBP2', 'STK17B', 'MFSD1', 'MTMR14', 'EID2B', 'FBF1', 'FAM19A2', 'BUB1B', 'SMUG1', 'GLT8D1', 'CES4A', 'MPP2', 'BMX', 'LRP1', 'GIMAP5', 'SIX2', 'ITPRIPL2', 'FLJ37201', 'FCRLA', 'SDHAP2', 'PCP4', 'RSL24D1', 'ZNF30', 'CRCP', 'MIR31HG', 'TSR1', 'PPP2R5C', 'OR52B6', 'RSAD2', 'IAH1', 'NUP205', 'CDH2', 'C8ORF74', 'AGPAT5', 'GSTM4', 'SPRR1B', 'PAPSS2', 'ARHGAP11B', 'IMPAD1', 'PIP4K2C', 'FUBP1', 'NCAN', 'OSBPL7', 'DAZAP2', 'LINC00957', 'PIWIL1', 'BRCC3', 'SNORD8', 'TMEM145', 'SLC25A32', 'DES', 'RGN', 'CENPE', 'ZNF675', 'LOC153684', 'HAUS5', 'JMJD1C-AS1', 'DUSP10', 'ZYX', 'SEPT3', 'XKRY2', 'IFI27L2', 'ZFHX3', 'COA7', 'HMGB4', 'CHCHD3', 'OR2W5', 'NCKAP5L', 'ZNF492', 'PRKACB', 'DDX46', 'ZBTB33', 'F8', 'ZNF536', 'TOP3A', 'GLTP', 'KRTAP3-2', 'MKS1', 'ALDH3A2', 'C1S', 'MIS18BP1', 'PDLIM5', 'TOM1', 'TIAF1', 'EBPL', 'ABO', 'LAGE3', 'LY75', 'ERGIC1', 'SERTM1', 'HADHB', 'DGKG', 'SPRR2E', 'ARHGAP5', 'DAGLA', 'PIGZ', 'OR10R2', 'POMGNT2', 'SIX4', 'ASCC2', 'MIR600HG', 'KIAA0907', 'KCNQ5', 'SMIM20', 'ZNF263', 'FARSA', 'NLRP5', 'TMED10P1', 'BRICD5', 'MNT', 'ATG14', 'FAM150B', 'MYRIP', 'SLC17A9', 'NOTCH2', 'C19ORF40', 'RAB11FIP2', 'AREG', 'CIRBP-AS1', 'GRN', 'CLTA', 'CBLN2', 'PCDHA1', 'NRK', 'DHRS12', 'SNORD117', 'TUBA1C', 'ADD2', 'DHX38', 'GIMAP7', 'LONRF2', 'CLTCL1', 'KCNK7', 'AGAP3', 'LRIT1', 'KTI12', 'CITED1', 'CD200R1L', 'SYNPO2', 'THY1', 'GRAPL', 'CHIA', 'KLC1', 'CDK5RAP3', 'C15ORF48', 'EID3', 'ATXN7L1', 'MAFB', 'HOXD13', 'CDC42EP4', 'VMAC', 'CHPT1', 'NPTXR', 'GPATCH2', 'VWA8', 'MDGA2', 'ZAR1', 'HS6ST2', 'ZNF766', 'CACNB1', 'GFI1', 'TINAGL1', 'NKX2-1', 'ANGPTL1', 'KHDC3L', 'KLRC4', 'KIAA0196', 'MAPKBP1', 'FAR2', 'DSPP', 'KDELC2', 'HOXA13', 'AAGAB', 'RHBDF2', 'GMPPB', 'IGFALS', 'EFNA5', 'ZNF692', 'LINC00628', 'CEACAM19', 'TPP1', 'TRIM14', 'SNORD115-39', 'FBXO43', 'ARIH1', 'USP3', 'HMGB3P1', 'MDM4', 'SULT1C2', 'ACSS2', 'NIT2', 'ANKRD30BP2', 'AZI2', 'BTBD19', 'D2HGDH', 'MIEF2', 'DRC7', 'PLBD1', 'PLK5', 'FAM210B', 'MPRIP', 'TMX1', 'LEMD3', 'ASL', 'TOP2B', 'TTC9C', 'ACSL6', 'ITFG1', 'GGT1', 'OR2D3', 'MAML3', 'TRIM29', 'OR1E2', 'STX8', 'CDC26', 'LMCD1', 'STX3', 'OR51M1', 'LINC00696', 'SPAG5', 'MAGI1', 'AP3B2', 'BBOX1', 'CPVL', 'EYS', 'TRIM3', 'EPSTI1', 'SCNM1', 'ZC3H13', 'PRCC', 'PUSL1', 'PRDM13', 'IP6K3', 'ID2', 'AZGP1', 'PLIN4', 'HDDC3', 'SNORD115-25', 'SP110', 'GLIS3-AS1', 'WDR60', 'ZG16B', 'EMB', 'PTPRE', 'LOXL1', 'NUDT16L1', 'DTHD1', 'DACH1', 'ETV1', 'NOXO1', 'TMEM39B', 'ELP2', 'HECW1', 'DPY19L1', 'TPTE2P3', 'PRKCD', 'DEFB125', 'ABCA13', 'CDC14C', 'CSF3', 'TRPC6', 'FABP5P3', 'POMZP3', 'SFXN5', 'RAD50', 'PRAM1', 'POLR2K', 'DHRSX', 'UGT1A9', 'BEAN1', 'MYOT', 'MIR503HG', 'MEIS1', 'ADCY2', 'CFDP1', 'NANOS2', 'TM9SF1', 'OR13J1', 'CERKL', 'AFP', 'GPX3', 'ZNF407', 'RIMS4', 'KIAA0226', 'RNF7', 'LINC00336', 'GPR139', 'DR1', 'DSG1', 'ZNF84', 'ZP3', 'FAM129C', 'LINC00698', 'ALKBH8', 'TCP10', 'TNC', 'RARB', 'A4GALT', 'KLHL42', 'NUP188', 'DUX4L2', 'CEP44', 'OR6V1', 'ADRBK2', 'C20ORF85', 'IFIT1B', 'EOMES', 'IRX2', 'CCSAP', 'RPGRIP1L', 'GBAP1', 'SF3B4', 'ZNF876P', 'GDNF', 'ID1', 'ZNF684', 'SLC13A2', 'PLCL2', 'MMAA', 'CHMP6', 'AMOT', 'WFIKKN2', 'SLC12A3', 'GDF10', 'PLCB1', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.8051188707862562 Spearman Correlation: 0.7435895846306876 Coefficient of Determination: 0.6482163960961363 RMSE: 0.13291787794742027 NRMSE: 0.050338147300670426 MAPE: 504.95780981446103 Pearson Correlation: 0.04157338105291179 Spearman Correlation: 0.1248170910155107 Coefficient of Determination: -7.591136110531258 RMSE: 0.8220645286447626 NRMSE: 0.40611221483959953 MAPE: 553.2326520246071 Predictor: ElasticNet Pearson Correlation: 0.7698394415783557 Spearman Correlation: 0.7038466056872704 Coefficient of Determination: 0.5921980102977982 RMSE: 0.14311009578532097 NRMSE: 0.05419810482307175 MAPE: 591.9380904943722 Pearson Correlation: 0.05328750316768637 Spearman Correlation: 0.11270607745585796 Coefficient of Determination: -1.0687643583022517 RMSE: 0.403400211922878 NRMSE: 0.19928575899125986 MAPE: 369.2107792527828 Predictor: RandomForests Pearson Correlation: 0.5724333386165535 Spearman Correlation: 0.4288236199985836 Coefficient of Determination: 0.18520834110928663 RMSE: 0.20228742653335702 NRMSE: 0.07660951582403219 MAPE: 186.85101775180686 Pearson Correlation: 0.19765549296988144 Spearman Correlation: 0.30101770807256645 Coefficient of Determination: -0.006535895709416373 RMSE: 0.2813813073638843 NRMSE: 0.13900658885792833 MAPE: 144.5210480872398 Protein: CDH1 x_train_column_count: 836 x_train columns: ['TTC22', 'KCNH1', 'TMEM211', 'CATSPERG', 'LPA', 'MFI2', 'FLJ45079', 'LBR', 'CSMD1', 'F12', 'ENOX1', 'SLC7A14', 'ACTR3BP2', 'LIMK1', 'NDUFS6', 'SNORD115-27', 'DGCR6', 'NDUFAF2', 'GCNT4', 'SLC35F5', 'OGN', 'CLEC3B', 'DGKH', 'HOXA5', 'TTC19', 'TMEM130', 'ERMP1', 'SRRM5', 'CHRM3', 'GPR146', 'FRYL', 'TUBB2B', 'NPTX1', 'NR2F1-AS1', 'MPST', 'TTLL13P', 'PRRT2', 'OTUD6A', 'COA4', 'RPL13AP17', 'M6PR', 'TRIM37', 'SNX15', 'TTC31', 'EPHA2', 'RPS4Y1', 'BEAN1', 'CCNB1', 'TACC3', 'EIF3K', 'OR8B2', 'C4ORF33', 'OCRL', 'TRIM52', 'TBCEL', 'DTNBP1', 'TMEM135', 'WDR18', 'H2AFX', 'TMCO4', 'CCNJL', 'CYP46A1', 'CXCL16', 'PILRB', 'GPR87', 'DDX56', 'AOC4P', 'THNSL1', 'CSNK1G2', 'FAM81A', 'KLK10', 'FAM58A', 'IGDCC4', 'SPDYA', 'CC2D2A', 'NEDD4', 'EFCC1', 'ZNF768', 'DEFB114', 'SYBU', 'TLCD1', 'CKS2', 'PSMD4', 'CSRNP1', 'CYTH2', 'WDR83OS', 'CASP3', 'OR6Q1', 'ZNF595', 'MRPS34', 'MRPL23-AS1', 'ZSCAN30', 'PDLIM1', 'PSG9', 'PPP1R2', 'SGPP1', 'PWWP2A', 'MBTPS1', 'SLC50A1', 'SEPT1', 'VCX3A', 'TXNDC9', 'ATRIP', 'TSPYL5', 'ATP6V1B2', 'CNGA3', 'SAR1B', 'NUP54', 'OR2K2', 'DUX4L5', 'SNORA27', 'GFRA1', 'FDPSP2', 'RAB13', 'SEPW1', 'CA14', 'LYPD6B', 'KRTAP20-3', 'TRAM2', 'ZNF697', 'SNORD86', 'CFH', 'TCP10', 'TLE4', 'ACOT2', 'SNORD91A', 'CERKL', 'FGF6', 'CBLN1', 'CWC27', 'B3GNT2', 'CAPN10', 'NGFR', 'SUMF2', 'AFM', 'PNLDC1', 'RPS6KA1', 'SERPINB8', 'KCNE3', 'LOC256880', 'ZFP28', 'NOL4L', 'ATP9A', 'GALNT9', 'PPY', 'ADGRF4', 'DFNA5', 'ZNF283', 'USP6', 'OR10J3', 'LINC00696', 'AMBP', 'FAM65C', 'MLKL', 'WNT11', 'CARKD', 'CLRN1-AS1', 'SH3RF2', 'PCDHGC3', 'ARSJ', 'TARM1', 'MLN', 'DCAF8L2', 'EPO', 'ERICH4', 'EIF3A', 'TUFT1', 'EEF1G', 'RIMBP3C', 'KCNT1', 'ACAD10', 'CHRND', 'BCDIN3D', 'STK10', 'PHOX2B', 'AK3', 'SNAR-A4', 'AGPAT5', 'RHBDF1', 'JMJD1C', 'FGFR1', 'LINC00202-1', 'RPL34-AS1', 'RTL1', 'C2ORF66', 'ZNF136', 'KLLN', 'SAMD4A', 'MRPS36', 'SLC7A5P1', 'GPX7', 'ZNF324B', 'NFKBIA', 'DOHH', 'CSTF2T', 'MAL2', 'C1ORF95', 'FZD8', 'PRTG', 'TIFAB', 'CAMSAP2', 'C19ORF38', 'RAC3', 'SUN3', 'DICER1', 'MS4A8', 'LINC01548', 'UBAP2', 'ZNF221', 'RFX8', 'DNAH3', 'GCOM1', 'SRGAP3', 'CDC14C', 'C11ORF94', 'PSMD8', 'AOX2P', 'TEKT1', 'IL17RE', 'NANOS1', 'CUEDC1', 'GAS6', 'GAMT', 'BTN3A3', 'SNORA2A', 'CCL15', 'ADAMTS12', 'SOGA1', 'DNAH8', 'GRM1', 'OSBP2', 'KIAA1211L', 'D2HGDH', 'ZBTB17', 'SLC6A4', 'EPHX1', 'ZNF133', 'C8G', 'MACF1', 'PTK7', 'HHEX', 'RPL23AP7', 'CHMP2A', 'MATR3', 'FAM101B', 'CXORF49B', 'LYAR', 'ARPC1B', 'KRTAP12-3', 'MTF2', 'MAP3K9', 'ALOXE3', 'RBL2', 'RGS16', 'ZNF562', 'TRADD', 'CDKL4', 'SNORA37', 'FAM199X', 'ADAMTSL4', 'PML', 'CTIF', 'LPIN1', 'TBC1D9', 'SIAH2', 'CREBRF', 'MRGPRG', 'TRPC3', 'TESK2', 'LTB4R2', 'PSMD7', 'PQLC2', 'SNORD10', 'WRAP53', 'LINC00264', 'C1ORF52', 'MFSD6L', 'TMEM132B', 'DPP10', 'ZMAT4', 'PGM2L1', 'AMER3', 'OR2F1', 'ZNF295-AS1', 'RHOD', 'FUT1', 'WDR61', 'HOXD12', 'LCE1B', 'SLC2A9', 'HMBS', 'CDK9', 'PLEKHA1', 'SUGP2', 'UBA52', 'LAPTM5', 'MYH15', 'CD6', 'IL1RN', 'C10ORF10', 'CLN3', 'AANAT', 'CRELD1', 'DNTTIP2', 'CERS1', 'TREM2', 'NASP', 'CACNB3', 'GOLGA3', 'TREML4', 'CDHR1', 'HRAS', 'KHDC1', 'C17ORF49', 'PGLYRP4', 'AP2A2', 'TMEM244', 'GEMIN5', 'TAS1R1', 'FAM168A', 'ADAR', 'IRGM', 'SRPK2', 'GFRAL', 'RILPL1', 'HECTD3', 'SMIM7', 'LRRC20', 'PRKAG1', 'HIBCH', 'CST4', 'ASH1L-AS1', 'FOXO3', 'FERD3L', 'SOHLH1', 'CTBP2', 'PSMG3', 'PEAK1', 'FAM111A', 'IGFL1', 'BARX1', 'EYA4', 'ARFGEF2', 'TNFSF18', 'RAC2', 'ZNF45', 'PSME4', 'CMTM6', 'ARID4A', 'PAX8', 'WNT2', 'RASGRP3', 'SLITRK6', 'LY86-AS1', 'HDAC7', 'C20ORF173', 'KRTAP10-6', 'APBA1', 'DEFB134', 'SMC4', 'PODXL2', 'TRIM17', 'ACOXL', 'TTC14', 'FCRL2', 'DUSP22', 'SLC25A31', 'TXNIP', 'GALNTL6', 'ROS1', 'MYH6', 'SYTL4', 'SNORD12B', 'VPS37B', 'NDUFAF6', 'ARRB2', 'GABARAP', 'POU2F2', 'KIF21A', 'IMPDH2', 'XKR6', 'CCDC88B', 'OR10A6', 'STX7', 'TAF1L', 'ENOSF1', 'PC', 'SPATA20', 'UBA2', 'PAX5', 'CS', 'ZNF525', 'MYOF', 'APBB1', 'CUL4B', 'ADCY5', 'GGH', 'CHD1', 'GRIA1', 'NFKBID', 'GUCA1A', 'GOLGA6L6', 'LINC00926', 'SP140L', 'NKX2-5', 'TSSC4', 'RRNAD1', 'GTF2H2', 'OR7A5', 'XPOT', 'DLGAP4', 'POLG', 'SLC25A13', 'RNF216', 'TIMM13', 'STIM2', 'LRRC15', 'C14ORF39', 'PDCD4-AS1', 'HIST1H3E', 'PPP1R16A', 'DNMBP-AS1', 'MARCKSL1', 'PPP1R12C', 'KRTAP23-1', 'UGT1A1', 'ZNF419', 'TJP2', 'IL34', 'EVI2A', 'CCL3L3', 'AGO2', 'SHISA4', 'STS', 'MGRN1', 'EFNA4', 'PLEKHM1', 'MARCH2', 'OR51G1', 'FUT9', 'NDST2', 'TMEM98', 'ABHD5', 'PARP15', 'P2RX1', 'LMX1B', 'ING3', 'TEAD3', 'EHD4', 'C11ORF95', 'SEC61A1', 'MYC', 'HLA-DRB1', 'ADCY3', 'NAT8B', 'PSEN2', 'TMEM54', 'GJC1', 'NDUFA5', 'LOC100288778', 'NRAS', 'ZNF28', 'RIMBP2', 'FAM107B', 'GPR18', 'MOGS', 'TUBA1A', 'HAPLN4', 'ARX', 'CHRNA2', 'GPKOW', 'TTLL3', 'SCARA5', 'C1ORF123', 'ILK', 'GCNT7', 'PTPRR', 'DAD1', 'NPBWR2', 'INA', 'STAG2', 'ZNF281', 'PI4KA', 'FRAT2', 'GPR135', 'DKFZP434L187', 'SLC7A11', 'RBFOX3', 'REG3A', 'FNBP1', 'STXBP6', 'TIMM22', 'SNX14', 'HIST2H2BF', 'SLC38A7', 'PIK3C2A', 'CENPT', 'AFAP1L2', 'ABTB2', 'NOP9', 'C11ORF70', 'TMEM256', 'SORD', 'CAPN9', 'ASPDH', 'EPS8L3', 'ISYNA1', 'CELF3', 'CYP4F3', 'METTL21A', 'LYSMD4', 'OR6Y1', 'LMNB1', 'P2RX7', 'CCL26', 'CTXN2', 'PRDM16', 'MPPED2', 'AQP7P1', 'TMEM95', 'UGGT2', 'SNX12', 'KATNBL1', 'STX3', 'METTL12', 'AP2B1', 'ALDOB', 'GMPPA', 'GRIA4', 'C1ORF228', 'CYFIP1', 'MFGE8', 'EIF4ENIF1', 'SYMPK', 'FTSJ1', 'LRRC19', 'BGLAP', 'PPFIBP1', 'CCDC134', 'RAMP3', 'MTG1', 'GUCA1B', 'HEBP2', 'MPDZ', 'ZBTB20', 'C3ORF58', 'RPTN', 'VPS4A', 'TMCO1', 'SNX22', 'DPEP2', 'C7ORF43', 'APMAP', 'HLF', 'RUVBL2', 'HNRNPA2B1', 'RBP7', 'CASZ1', 'KRTAP2-1', 'GGA2', 'CCR1', 'ASB4', 'RCC2', 'AGPAT1', 'RBM15B', 'SQSTM1', 'LPO', 'HK1', 'FAM222A', 'ALDH2', 'NPNT', 'COG4', 'FRMD7', 'ULK4P2', 'CDC23', 'APOC2', 'PRG2', 'ZSCAN12', 'KLHL24', 'FLOT1', 'FAM180B', 'COA3', 'DNAJC30', 'LRRC58', 'PMF1', 'ZNF343', 'KLHL36', 'COQ2', 'HSPE1', 'SLC48A1', 'SLC22A23', 'PACS2', 'LPAR5', 'IFI30', 'SERTAD3', 'CPS1', 'SNORD15B', 'MGMT', 'LINC00161', 'ACY1', 'TPTE2P6', 'FLG2', 'SEC24B', 'MARC1', 'OR5AP2', 'ADIPOR1', 'ATF6B', 'PCDHA13', 'LIPE', 'MYH10', 'OR1J2', 'COL6A5', 'EXOSC7', 'ETFB', 'YARS2', 'TAOK3', 'EXOC3-AS1', 'ACTR1B', 'SUPT7L', 'MRPL43', 'ZNF513', 'UBE2Q1', 'PRKAB1', 'NAIF1', 'HERC3', 'PMEL', 'GPR180', 'DALRD3', 'LY86', 'STARD10', 'CYTH4', 'LOC115110', 'ELK4', 'SORT1', 'NINL', 'CEP170P1', 'KCNN4', 'AP1M2', 'NT5DC1', 'FOXL2NB', 'LINC00623', 'POLR3A', 'TICAM2', 'CECR5', 'SELM', 'MLH1', 'DPH5', 'C6ORF10', 'PART1', 'CYB561', 'DYNC1I1', 'OR5A1', 'SNORD116-20', 'ZDHHC8P1', 'ZNF493', 'WNT1', 'CCNT2', 'ANO1', 'RBM25', 'ZC4H2', 'ZNF879', 'SARDH', 'LINC00661', 'GPR149', 'PRAMEF10', 'ZNF296', 'ZCCHC24', 'MTHFSD', 'GPATCH3', 'ALG1L', 'TXLNB', 'USP9X', 'KPNA5', 'FAM195B', 'TBX4', 'OR10J1', 'SLC47A1', 'TLK1', 'ARHGDIA', 'RNF113A', 'DOCK1', 'XKRY2', 'ZNF737', 'WDR37', 'WDR81', 'TECTA', 'RWDD2B', 'GYS2', 'PPP1R32', 'GDF11', 'GRB14', 'U2AF1L4', 'VPS41', 'CAPN12', 'DENND6B', 'RFTN2', 'SNORD115-7', 'C6ORF47', 'CCDC126', 'TOMM70A', 'PDZK1IP1', 'PCDH19', 'CHST6', 'NAA15', 'HR', 'PDDC1', 'FAM216A', 'DCBLD1', 'NUTM2F', 'BDKRB1', 'AGGF1', 'ARSE', 'REEP1', 'FAM26E', 'LRIG3', 'BTG2', 'CCDC116', 'CEP170', 'C1GALT1', 'HSFY2', 'TMOD2', 'GSG1', 'HIF3A', 'SNRNP70', 'HIST2H2AC', 'FGF1', 'ETNPPL', 'IPCEF1', 'C17ORF62', 'DCAF16', 'LRRFIP1', 'SLC35F1', 'OR2V2', 'IFNGR2', 'OGG1', 'AFAP1L1', 'RBM39', 'CCNI2', 'OR5C1', 'ALKBH1', 'PNMA3', 'CEP126', 'PCDHGA5', 'NPTX2', 'PROP1', 'PCDHA11', 'GRIK1-AS1', 'IFNA17', 'RMDN3', 'CENPI', 'ZMAT5', 'PPP3CA', 'RRBP1', 'SGCB', 'ZBTB41', 'PYGL', 'MS4A12', 'LIME1', 'PKD1L2', 'GTF3C4', 'CTDP1', 'LINC00092', 'TSG101', 'FMO5', 'FCHO1', 'LOXL3', 'OLMALINC', 'CNNM2', 'PUF60', 'XK', 'IL2RA', 'ZMAT2', 'C16ORF92', 'POLR3B', 'PSAT1', 'CDKN1C', 'NUDT16P1', 'GAS5', 'AIDA', 'KRTAP19-4', 'LOC100132287', 'TBC1D2B', 'CD46', 'TMEM18', 'GHSR', 'RGS8', 'AGL', 'PEMT', 'PPCDC', 'PVRL3', 'KCNK10', 'HNRNPDL', 'APP', 'FBXO28', 'TMEM194A', 'CCDC58', 'TTC36', 'ZDHHC11', 'GRHL2', 'ZNF831', 'TMEM99', 'SQLE', 'GALE', 'SERP1', 'CBX2', 'RTN4', 'GUSB', 'ELMO2', 'USP8', 'SNORD11', 'HAUS2', 'PLA2G2F', 'INS', 'GRIK4', 'SYT12', 'KLRC4', 'SYCP1', 'MUC13', 'LAMB3', 'ZNF836', 'PXDC1', 'AP3M1', 'SSTR2', 'TRIM27', 'ARRDC4', 'GLRA3', 'SCUBE3', 'SLC25A32', 'XKRY', 'TMEM97', 'SNORD60', 'TK1', 'TEX35', 'KRI1', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 2.3160369040216563e-14 NRMSE: 3.892956993296113e-15 MAPE: 2.8793134242555714e-11 Pearson Correlation: 0.2687992857860067 Spearman Correlation: 0.28704028875231685 Coefficient of Determination: -5.322787178200627 RMSE: 2.9176054578629804 NRMSE: 0.472547934609015 MAPE: 1944.486480148194 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 1.9958483020595168, tolerance: 0.06837930598298066 positive)
Pearson Correlation: 0.9999365088724845 Spearman Correlation: 0.9998182799941849 Coefficient of Determination: 0.9998662402422779 RMSE: 0.013050824157920249 NRMSE: 0.0021936739041433866 MAPE: 11.112572822352266 Pearson Correlation: 0.28958884223973813 Spearman Correlation: 0.3272363671836894 Coefficient of Determination: -5.355748154518358 RMSE: 2.9252003773515183 NRMSE: 0.4737780404508306 MAPE: 1195.9219036182421 Predictor: RandomForests Pearson Correlation: 0.7495030530779215 Spearman Correlation: 0.7067488562876051 Coefficient of Determination: 0.5558583074044325 RMSE: 0.7520313978967605 NRMSE: 0.12640670295610584 MAPE: 204.09343959922103 Pearson Correlation: 0.7661353393730507 Spearman Correlation: 0.7202711930543363 Coefficient of Determination: 0.5787784872898201 RMSE: 0.7530564844056444 NRMSE: 0.12196826866730012 MAPE: 131.6711218799386 Protein: CDH2 x_train_column_count: 474 x_train columns: ['PWRN2', 'PHLDB3', 'ISCA1P1', 'SORL1', 'HMGXB3', 'B4GALT7', 'ZUFSP', 'IFITM5', 'CACFD1', 'WDFY3', 'TRRAP', 'IKZF2', 'PTPRA', 'LRRC16B', 'FRZB', 'HRK', 'DUOX1', 'CENPF', 'FAM175A', 'ARMCX6', 'SBF1', 'CD164', 'CAPS', 'ACAD9', 'SEC14L4', 'CRX', 'FOXP4', 'PIGB', 'GBA2', 'CST9', 'TRAF6', 'CXCL9', 'PAGE3', 'UTP20', 'TMEM9', 'MROH2B', 'SNORD115-3', 'HIST1H3A', 'OR5J2', 'ZAR1', 'RBPMS', 'PLD1', 'PHKA2', 'BAALC', 'EDN3', 'LAMA1', 'CADM1', 'RPF2', 'CSF1R', 'TM4SF5', 'HNRNPA3P1', 'OR13J1', 'IL5', 'LOC613037', 'FGFRL1', 'RBFOX2', 'ZC3H14', 'B3GALNT1', 'CLIP3', 'ANKRD23', 'SORCS1', 'SNORD35A', 'CASC3', 'AKR1C4', 'AKIRIN2', 'STEAP2', 'ZBTB44', 'ARPP19', 'DHRS9', 'CYSLTR2', 'UROC1', 'SARNP', 'ITPR3', 'CMTM3', 'PLA1A', 'FAM175B', 'C8G', 'PROKR2', 'ARHGAP17', 'C3ORF36', 'MYADM', 'FAM47A', 'PHAX', 'ANXA4', 'PDE2A', 'LINC01020', 'SGK223', 'FZD3', 'POFUT2', 'SNORD17', 'LINC00628', 'CLK2P1', 'NANP', 'BUB1', 'CASR', 'ZNF519', 'SLC23A3', 'ZDHHC11', 'GREB1', 'SLC6A20', 'SPATA2', 'HIST2H4A', 'PPP2R5B', 'DYNC2LI1', 'PLXNB2', 'HBD', 'CLDN23', 'ZBTB1', 'PPP6R2', 'UGT1A1', 'DCDC1', 'SP7', 'ARMC1', 'RNF220', 'C6ORF106', 'GMNN', 'OR2T10', 'CTR9', 'SYT9', 'MGC16275', 'CRYAA', 'CCL15', 'ELOVL7', 'RPL8', 'OXCT2', 'CRYZ', 'MFSD10', 'BEX4', 'OR10C1', 'NFE2L3P2', 'LOC728392', 'SV2A', 'PRDM6', 'IRX4', 'SLC2A6', 'ZNF444', 'GNRHR', 'MORC4', 'TUBB1', 'CREB1', 'C11ORF95', 'THEMIS2', 'LINC00882', 'DKFZP434L192', 'TUT1', 'ACSS2', 'TMEM256', 'MAGEB6', 'ZNF599', 'MYLK4', 'SYCE2', 'EOGT', 'LIF', 'SLC35G5', 'NDOR1', 'AKAP5', 'KIAA0930', 'SCUBE3', 'PRRC1', 'PCF11', 'HOXA11', 'LOC391322', 'GABARAPL1', 'CKLF', 'RNF138', 'SDK2', 'CYP2S1', 'C9ORF69', 'UCA1', 'GGT8P', 'CHPF2', 'THNSL2', 'FLRT3', 'RRAGB', 'IKZF5', 'KLHL5', 'C1ORF122', 'RPS7', 'XRCC2', 'GLUD2', 'KLLN', 'MOG', 'FAM150A', 'CCDC7', 'SNORD94', 'EFNA4', 'OR1E2', 'LYNX1', 'LINC00894', 'RFTN1', 'VWDE', 'FBXO2', 'TEX37', 'RNASE13', 'KPNA1', 'ZFYVE16', 'KLHL22', 'UCK1', 'ALDH7A1', 'ANO1', 'IRF4', 'ERCC6', 'MUCL1', 'PIM1', 'LETM2', 'ZNF93', 'MAN1C1', 'VPS37A', 'PRSS21', 'RNF166', 'FNTB', 'ABCA4', 'GDPD1', 'GMCL1P1', 'HIST1H2BN', 'AHCTF1', 'TSPYL4', 'RPLP0P2', 'ZNF837', 'RGS10', 'ITGAV', 'TMPRSS3', 'PAM', 'CENPN', 'THG1L', 'KCNQ2', 'COL3A1', 'WFDC6', 'ARMCX1', 'EHHADH', 'SLC25A45', 'CYP4F12', 'HBS1L', 'BANP', 'ATP13A5', 'ZNF71', 'CLEC19A', 'TTTY14', 'PHRF1', 'CUTC', 'FAM170B', 'HPVC1', 'SNORA11C', 'MMP2', 'NMU', 'ZNF576', 'SUSD6', 'IL22RA1', 'COL4A4', 'PHF1', 'DEFB1', 'TMEM105', 'SOHLH2', 'LOC100270804', 'FITM2', 'RPS6KC1', 'CSN1S1', 'FAM71F1', 'SNAR-C2', 'MYO18B', 'MYT1L', 'NINJ1', 'MESP2', 'TMEM254-AS1', 'ST6GAL1', 'FAM57B', 'MRM1', 'UBAP2', 'NEURL3', 'C12ORF50', 'PRR22', 'CAST', 'CXCL10', 'PREX1', 'LRRC8A', 'DIO1', 'DDB1', 'IL5RA', 'TRPM6', 'TSPAN14', 'SNORD96A', 'EP300', 'SNORD4A', 'GNGT1', 'NDUFAF7', 'GPRC5B', 'OR13C9', 'DNASE1L2', 'CHSY3', 'KRBOX4', 'SAMD9L', 'CAPN2', 'RYR1', 'LAMA4', 'MGC15885', 'GLYAT', 'OCIAD2', 'TRDN', 'GPR4', 'CCDC113', 'CYP26C1', 'HAPLN4', 'TTLL12', 'ZBTB40', 'B3GNT7', 'APOA4', 'DDX27', 'AGPAT6', 'TRMT10A', 'SMC3', 'BCAP31', 'MAGEC1', 'KIAA1217', 'UXT-AS1', 'LRRC61', 'PPM1G', 'RAD54L2', 'LIPE', 'DUSP11', 'PPP1R26', 'ARPC5L', 'MPP6', 'IGSF11', 'TRIM58', 'RAF1', 'SUSD3', 'TPH2', 'BMX', 'HAUS3', 'ABCB10', 'ABHD8', 'SNORD27', 'CGNL1', 'C1QL4', 'HOXB2', 'DNASE1', 'TBX4', 'TRIM50', 'DPP3', 'SLC6A15', 'ARHGAP4', 'PTBP1', 'POTED', 'MAP3K9', 'HSF1', 'EMC1', 'TSPO2', 'OR5B3', 'NUDCD3', 'RRM2', 'PDSS2', 'WFDC11', 'TUBB7P', 'C10ORF32', 'RPL32P3', 'TUBGCP5', 'PRY2', 'TMEM133', 'EXOC6B', 'SARDH', 'ACTA1', 'LOC285627', 'VWA2', 'RPE', 'HEATR6', 'ZFP36L2', 'DUSP23', 'ELMO2', 'DTHD1', 'PEX5L', 'IRX2', 'STMN3', 'ECT2L', 'MSL1', 'UHRF2', 'RPL14', 'SLC17A4', 'EPHX1', 'CRISPLD1', 'SLURP1', 'LSM2', 'HDAC11', 'CACNB2', 'CRMP1', 'KIF20B', 'UBE4A', 'POU2AF1', 'GALNT11', 'SPRED2', 'SARS2', 'PANK3', 'RGPD8', 'PNN', 'STARD7', 'SF3B2', 'ENTHD2', 'CLEC4M', 'NSFL1C', 'ZBTB25', 'ACAD10', 'DHRS12', 'HM13', 'LAMB2P1', 'MOV10L1', 'TMEM167A', 'ADCY6', 'PACSIN1', 'DIRC1', 'PAQR3', 'PTPRC', 'WNT5B', 'KCTD9', 'PNMAL1', 'CYP4A11', 'SEC1P', 'ZNF606', 'KCNA10', 'LGMN', 'CA13', 'BRD7', 'WTIP', 'TTTY15', 'GOPC', 'NOTO', 'LOC392196', 'HBZ', 'NEDD8', 'SCARB1', 'CTDNEP1', 'PHF10', 'HDHD3', 'ANKRD20A9P', 'TIMM17B', 'DDAH2', 'SPAG5', 'TMPPE', 'CCNI', 'GLYR1', 'OR4D6', 'ADGB', 'RAD23A', 'FBXO5', 'PSMB7', 'FGF2', 'ADAM7', 'ADRBK1', 'TRUB1', 'ZMYM2', 'PKIG', 'PPP1R12B', 'HEXDC', 'ABHD2', 'RAMP2', 'HLA-DMA', 'OR8K1', 'SART1', 'ERH', 'KRT6A', 'MFSD6L', 'KIAA1467', 'EDNRA', 'DOCK4', 'STAMBP', 'C4BPA', 'STRC', 'PIWIL2', 'RHOJ', 'WRB', 'TNRC6C', 'DHX33', 'LMO3', 'GIMAP5', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.9469185477880204 Spearman Correlation: 0.9293556822098098 Coefficient of Determination: 0.8966547361449738 RMSE: 0.11932921347791592 NRMSE: 0.04408383611991559 MAPE: 1306.589987122746 Pearson Correlation: 0.08644666747134876 Spearman Correlation: 0.06929567847039314 Coefficient of Determination: -509.47812601227406 RMSE: 8.475259185879686 NRMSE: 4.373875824885011 MAPE: 1061.6095512010002 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 8.296108318282803, tolerance: 0.007399072171665535 positive)
Pearson Correlation: 0.9056877551001321 Spearman Correlation: 0.884552668555642 Coefficient of Determination: 0.8195143837712024 RMSE: 0.15769676606235516 NRMSE: 0.058257975470693155 MAPE: 330.38020982122055 Pearson Correlation: 0.09808104220564004 Spearman Correlation: 0.07084674665886256 Coefficient of Determination: -19.093700948986523 RMSE: 1.6814903800104664 NRMSE: 0.8677764256646883 MAPE: 555.7785478653044 Predictor: RandomForests Pearson Correlation: 0.5692273399267134 Spearman Correlation: 0.5125666661119516 Coefficient of Determination: 0.1812287356986919 RMSE: 0.3358789485723444 NRMSE: 0.12408388602790102 MAPE: 716.3526621407841 Pearson Correlation: 0.17195418114229521 Spearman Correlation: 0.23324065944785874 Coefficient of Determination: 0.02844092121418429 RMSE: 0.36974220511970146 NRMSE: 0.19081498948222195 MAPE: 113.09308742299129 Protein: CDH3 x_train_column_count: 75 x_train columns: ['GPR88', 'FUT9', 'NDUFB2-AS1', 'KLHL9', 'PSMA7', 'SERPINA3', 'RBM4', 'ENPP6', 'ETV6', 'CSK', 'ANKRD17', 'GALNT12', 'UBR4', 'COL13A1', 'ARHGAP30', 'CRP', 'ZNF425', 'RPS27A', 'TISP43', 'HOXB2', 'RAPGEF5', 'MNAT1', 'DHRS4-AS1', 'SLC25A21', 'SFXN3', 'SLC5A12', 'FAM95B1', 'EPHA2', 'AGAP3', 'CCDC36', 'HKDC1', 'HIST2H3C', 'XKR8', 'C12ORF50', 'SERP1', 'STARD13', 'CCSER1', 'OCEL1', 'TSPAN6', 'KIAA0319', 'FAM92B', 'RPL37', 'TOP3A', 'PIAS2', 'KRTAP10-2', 'BRAF', 'LEAP2', 'SAMSN1', 'COL6A6', 'ANP32B', 'PPP3R1', 'SNORD15A', 'ZNF510', 'THEM4', 'VTRNA1-3', 'CPA6', 'SNORD115-3', 'MND1', 'MAN1A2', 'SNORD19B', 'EGFL7', 'DDX21', 'FOXA1', 'MRPL30', 'SPATA31D1', 'SERTM1', 'UOX', 'HIST1H2BJ', 'CALB1', 'TCIRG1', 'COL8A1', 'LOC401010', 'C10ORF35', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.549284886016029 Spearman Correlation: 0.5524501000825858 Coefficient of Determination: 0.301713886005642 RMSE: 0.17448043060369622 NRMSE: 0.12241148243510147 MAPE: 712.2646941201222 Pearson Correlation: 0.33375051457090843 Spearman Correlation: 0.4175495073651352 Coefficient of Determination: -0.007896104681119454 RMSE: 0.20538542729587028 NRMSE: 0.15720157311912675 MAPE: 494.2473652999295 Predictor: ElasticNet Pearson Correlation: 0.5353439079065717 Spearman Correlation: 0.5319596772985853 Coefficient of Determination: 0.2865697944795327 RMSE: 0.17636230563122607 NRMSE: 0.12373176294495852 MAPE: 710.8626582045334 Pearson Correlation: 0.39310879809948057 Spearman Correlation: 0.4446395473612331 Coefficient of Determination: 0.11046549144125728 RMSE: 0.1929492713622 NRMSE: 0.14768296558174066 MAPE: 469.48596733225355 Predictor: RandomForests Pearson Correlation: 0.5500256916882715 Spearman Correlation: 0.547038485953828 Coefficient of Determination: 0.25155388684907054 RMSE: 0.1806384882996372 NRMSE: 0.1267318349747693 MAPE: 434.4494836553783 Pearson Correlation: 0.5066633887244145 Spearman Correlation: 0.5434689298605014 Coefficient of Determination: 0.2297499085021989 RMSE: 0.17954678037936947 NRMSE: 0.13742472723467059 MAPE: 267.8372135789038 Protein: PTEN x_train_column_count: 886 x_train columns: ['MRPL19', 'ZNF696', 'AOX2P', 'ADGRG4', 'CDR2', 'FAM78A', 'FAM200A', 'KIN', 'BAP1', 'RC3H1', 'SPAG8', 'HDAC10', 'MICAL1', 'OR2F2', 'RPS4X', 'PDZK1', 'FGF3', 'KCNAB1', 'G0S2', 'ST3GAL2', 'FBXO7', 'GOLGA2P10', 'SNHG8', 'KRTAP21-2', 'ENDOG', 'HEMGN', 'UGT1A4', 'KCNMB3', 'IFNA21', 'BRD1', 'RFPL2', 'GGNBP2', 'WDR90', 'SNORD110', 'CDH23', 'DOCK11', 'ATP13A1', 'AFM', 'AGRN', 'SERAC1', 'PAX9', 'ZNF57', 'KRT74', 'KCNS1', 'PAIP2B', 'FUK', 'UBE2J1', 'ACSF2', 'CHMP4B', 'OR5R1', 'RTL1', 'FAM45A', 'C10ORF76', 'ZIC1', 'SNAI3', 'CAMKMT', 'MAG', 'ZNF467', 'HECTD3', 'MAT2A', 'SWT1', 'PIDD1', 'GUCY1B3', 'TREM2', 'NACAD', 'PTGER4P2-CDK2AP2P2', 'HAUS8', 'ZC3H10', 'SLC9C2', 'NR2E1', 'PLSCR2', 'CLVS1', 'UBB', 'SNAR-A3', 'CREBBP', 'SRP68', 'ADGRA2', 'CD109', 'FAM155B', 'CUL7', 'ATAD3A', 'MGMT', 'MAGEB10', 'HPCA', 'ALS2CR12', 'SAR1B', 'CRYBA1', 'ZNF692', 'ENOX2', 'ABCC3', 'TCEAL4', 'TMEM260', 'LRRD1', 'NHSL2', 'KLHL17', 'SLC17A9', 'LIN9', 'ABCF1', 'PAX4', 'ACE', 'GSPT2', 'SPDYE7P', 'SLC41A1', 'SCAND1', 'SNX11', 'SNORA19', 'GEMIN7', 'MRPL48', 'DMTN', 'MYO1G', 'FOXB2', 'GRXCR1', 'OR5AP2', 'TGM6', 'BAG3', 'TRIML2', 'FLJ23867', 'ZC4H2', 'PLGLB2', 'HERC4', 'RAB3B', 'R3HDM2', 'CECR5-AS1', 'DRD2', 'DNAJB3', 'LINC00158', 'SYNPO2L', 'COBL', 'BCL11B', 'CHD4', 'NEDD4L', 'RRN3P3', 'PDE4D', 'SLC51A', 'MALSU1', 'DHX16', 'LIG4', 'KRTAP5-4', 'KIAA0355', 'EIF1B', 'TBC1D17', 'SALL2', 'MRGPRG', 'LOC90768', 'PUS7', 'TFAP2E', 'PADI3', 'ZNF71', 'KRT15', 'FBLL1', 'OR2M3', 'VAMP3', 'TTTY5', 'IGIP', 'DAND5', 'RAB3A', 'ZNF625', 'CCDC91', 'ZNF766', 'RHPN1', 'ZBTB44', 'MROH9', 'GRIP2', 'KRT33A', 'ANPEP', 'NRSN1', 'TNS2', 'USP34', 'PSG1', 'FKBP9P1', 'ATP11C', 'LOC388955', 'KANSL1', 'DDX11', 'FAM89A', 'SNORA77', 'BTN3A2', 'KCNMB4', 'ODC1', 'PEX26', 'MSMP', 'KATNA1', 'SUPT5H', 'OGFOD3', 'HIGD2B', 'INIP', 'ARPC5L', 'BET1L', 'GABRG3', 'STX5', 'OR4N3P', 'MPP6', 'CDC25C', 'KRTAP23-1', 'SNORD114-22', 'PPFIBP1', 'CEP295', 'OR51A4', 'SNORA59B', 'FAM124B', 'SHARPIN', 'DUPD1', 'CNFN', 'SGK494', 'SNORD20', 'STAM2', 'MRPS11', 'PCSK4', 'PECR', 'FUCA2', 'SIGLECL1', 'C17ORF89', 'UTP15', 'STRADA', 'ANKRD7', 'TTTY2', 'BIRC5', 'MUC2', 'TRAP1', 'DNM2', 'CD14', 'ZFYVE26', 'PLCXD3', 'LRRTM1', 'MST1R', 'HSD17B6', 'TERT', 'NFIA', 'ARMCX6', 'GABRA6', 'C9ORF16', 'SPANXN1', 'OR8D1', 'FBXO34', 'PZP', 'TIAF1', 'IRX3', 'C4ORF36', 'ZNF843', 'NUMB', 'FDPSP2', 'PFN3', 'TSPAN1', 'RAB4A', 'EIF1AX', 'NFKBIE', 'GNAL', 'TRIM72', 'POU2AF1', 'NOMO1', 'PKD1L1', 'ORC3', 'FGF9', 'PGRMC1', 'PTPN11', 'LVRN', 'C1QB', 'CBFA2T2', 'ERVFRD-1', 'POGZ', 'DOK5', 'XPO5', 'GNA13', 'ATP6AP1', 'IQCF3', 'JAK3', 'MT1DP', 'RAB8A', 'BCAR3', 'ALG11', 'ABCC12', 'BLOC1S4', 'CDC20', 'SLC35D2', 'ARMC2', 'OPA1', 'PLEKHJ1', 'ELMOD3', 'SNORD115-38', 'KCTD9', 'ZNF470', 'RNF166', 'GMNC', 'UNC119B', 'TIFA', 'MUC20', 'TMED8', 'HMGB3', 'TMEM169', 'LSM6', 'FFAR3', 'KRT37', 'ANKRD12', 'HSDL2', 'C2CD5', 'DESI2', 'KLK12', 'SOD1', 'PARVA', 'NDC80', 'SGPP1', 'GNPDA2', 'YBEY', 'GSDMA', 'CTSL3P', 'CLDN10', 'ZDHHC5', 'OR6K6', 'PNLDC1', 'WRNIP1', 'RCN3', 'SPATC1', 'RPL31', 'KCND1', 'CASP7', 'COL9A1', 'FABP12', 'CD84', 'METTL9', 'A1BG-AS1', 'SRPX', 'FBXO6', 'PROSER1', 'ATM', 'MC4R', 'CDCP2', 'ETV1', 'IL16', 'PDCL', 'PLEKHG4B', 'STYXL1', 'TMEM184C', 'FAM131B', 'ARSB', 'BST2', 'PNMAL2', 'RIMS2', 'LCA5L', 'SNORD22', 'C1ORF159', 'EME1', 'LZTS3', 'XPOT', 'OSBPL9', 'CTNNB1', 'APOL5', 'ACTN1', 'PPP2R5D', 'SNORD114-25', 'MUC16', 'SNORD50A', 'VTI1B', 'PRRT2', 'ZBTB22', 'LMNB1', 'FOXJ3', 'FKBP4', 'CALML3', 'MMP1', 'CLPP', 'KIAA0930', 'GGA1', 'TBC1D15', 'KIF1B', 'ADGRA1', 'SNORA30', 'EHD3', 'SERTAD1', 'ALPI', 'CHCHD4', 'TOMM7', 'DDB1', 'RNF40', 'PSMG1', 'SNORA47', 'SEC24C', 'ALDH1B1', 'NSUN4', 'SGPL1', 'CPNE7', 'PLA2G1B', 'LOC100240735', 'C5AR2', 'GPR176', 'C1ORF229', 'GARNL3', 'SPOP', 'LRRC16A', 'IL31RA', 'RTBDN', 'CXCL14', 'MDC1', 'ADGRL2', 'FEZ1', 'CAMKK1', 'NDUFS4', 'PHLDA3', 'LY6D', 'GLS2', 'SCN11A', 'CTNNA1', 'RGS2', 'MAP1A', 'RAPGEF3', 'CFHR2', 'LRRC4', 'ATP10B', 'RPS19', 'SLC25A37', 'LCMT2', 'CLDN14', 'FEM1B', 'SMC4', 'CSDC2', 'YIPF4', 'SLPI', 'ZNF833P', 'DIRC1', 'TP53I11', 'C5ORF58', 'PRSS1', 'BOD1L1', 'SF3B4', 'C2CD4D', 'LOC646471', 'CDS2', 'MRPS16', 'CCDC176', 'FAM160A1', 'IMPAD1', 'GNAI2', 'DHRS7B', 'PIGC', 'NCOA2', 'DTX3', 'ZFYVE28', 'NOL3', 'CDC42SE1', 'CA5BP1', 'SPG11', 'DEC1', 'CST7', 'KLHL38', 'TENM1', 'PLCB4', 'CACNA1G', 'MARCH2', 'ERC1', 'PRSS12', 'VPRBP', 'ANKMY2', 'POM121L9P', 'FAM196B', 'WNT8B', 'GOLPH3', 'KIR2DS4', 'GTF3C6', 'ZKSCAN8', 'LAMTOR4', 'KIFC3', 'ADAMTS4', 'BHMT2', 'SNORD9', 'ZCCHC8', 'ABCB1', 'GCNT2', 'ADAM33', 'GNG5', 'SNORD43', 'IKBKB', 'HIST1H2BM', 'DCUN1D2', 'MESTIT1', 'VWA1', 'CRIP2', 'PPP1R1C', 'IGLL1', 'TIE1', 'TMA7', 'MTERF3', 'ISCA2', 'NUCB2', 'IL7R', 'PPP2R3C', 'GOLGA8CP', 'CTTN', 'CRTC3', 'ZFAND3', 'CXCL10', 'SHMT2', 'PARD6A', 'OSBPL7', 'PDCD5', 'NBPF3', 'CDKN2D', 'CWH43', 'KIF27', 'LONRF3', 'C9ORF3', 'SLC35G2', 'RPS27A', 'RMDN3', 'SCARNA10', 'VBP1', 'ARRB1', 'NAP1L6', 'RNF115', 'DDX25', 'GPR89A', 'SLC25A26', 'MAP3K6', 'CD82', 'SCARNA23', 'GRPEL2', 'RPL29P2', 'SMR3B', 'DHRSX', 'KRTAP5-2', 'RGS17', 'TSPAN9', 'AHNAK', 'EXOC5', 'DGAT2', 'OLFML2B', 'COG4', 'ANK3', 'RSPO4', 'REM1', 'COX6B2', 'LAG3', 'KDELR2', 'NIPBL', 'PNRC2', 'NUMBL', 'GOT1L1', 'PLIN4', 'EMID1', 'ADAL', 'SPPL2A', 'TMBIM1', 'RAB1A', 'CCDC101', 'GLT6D1', 'HSP90AA1', 'INHBA', 'PCNAP1', 'GSPT1', 'PSAT1', 'NUP210', 'PMS2P1', 'CTXN1', 'DHFRL1', 'CACNA1F', 'N6AMT1', 'PVRL1', 'ARPC1A', 'ADGRG5', 'NGFR', 'SSBP1', 'ZBED1', 'C5ORF51', 'FAM212A', 'FZD6', 'ZNF208', 'PHLDA2', 'LIMK2', 'ALX1', 'RNASE4', 'ARHGAP24', 'C2ORF71', 'FBXO46', 'G6PC2', 'ASMTL-AS1', 'DPY19L2P4', 'DEFB116', 'STAG3L1', 'CCDC154', 'C14ORF169', 'BRICD5', 'OR52A1', 'SNORD116-15', 'UNC5A', 'VHLL', 'PANX2', 'ANGPT2', 'CORO2B', 'SPRR2G', 'LRP5', 'ZNF567', 'C9ORF139', 'DIRC2', 'GTF2IRD1', 'ELN', 'FCGR1A', 'TMEM100', 'HRK', 'PRSS48', 'CR2', 'PRSS8', 'S100PBP', 'DAPL1', 'CSTB', 'NANOS3', 'PALM', 'TEP1', 'MEX3B', 'MLST8', 'BDH2', 'MTX1', 'CD36', 'TINAG', 'PQLC2', 'MAOB', 'MAGEE1', 'ACTRT1', 'RGL4', 'LRRK1', 'PCDH20', 'SNORA41', 'KIAA0232', 'INO80B', 'ZBTB46', 'CIDECP', 'AMER1', 'SNORD116-25', 'HORMAD1', 'ZNF69', 'THEMIS2', 'PRSS37', 'C3ORF30', 'CHPT1', 'ZADH2', 'NME1-NME2', 'CLEC18C', 'CCDC103', 'SMIM5', 'OR6W1P', 'CLEC2B', 'TELO2', 'IRF6', 'HIST2H3D', 'RNF139', 'ENAH', 'C11ORF94', 'FSCN2', 'NAA35', 'MRAP', 'SHISA9', 'FKBP1B', 'CCL19', 'ARL15', 'LYPLAL1', 'EIF3IP1', 'HIST1H1T', 'SLC25A11', 'ACLY', 'AK9', 'CIZ1', 'SYN3', 'SH3D21', 'RPAP2', 'HHEX', 'LRRC31', 'PHF2', 'ZNF131', 'OR52E2', 'FANCG', 'SCARNA20', 'LINC00887', 'ABLIM3', 'INTS6', 'ADAMTS10', 'S100G', 'FAM49A', 'MUS81', 'TNIK', 'ROR2', 'WNK2', 'TM6SF2', 'SAT1', 'LCE2D', 'SLC35A1', 'SPATS2', 'RFX4', 'PRAMEF9', 'C16ORF90', 'BAZ1B', 'CXORF57', 'ZNF75A', 'CSH1', 'TRAF3IP1', 'UBA7', 'RPL23AP32', 'MSANTD2', 'CMTM2', 'POU3F3', 'SREK1IP1', 'CYP4F35P', 'GFOD2', 'PGS1', 'FAM205A', 'CYP4F2', 'SCOC', 'ACOT11', 'ACOX1', 'MSN', 'TLL2', 'EQTN', 'CHEK1', 'MARVELD3', 'KRTAP27-1', 'PCGF1', 'HJURP', 'HNF4A', 'CCDC134', 'TUBAL3', 'CDK8', 'PPM1K', 'THRSP', 'TMEM187', 'SNORA14B', 'NUP62CL', 'SNORA64', 'ZFP41', 'B4GALNT1', 'SLC10A2', 'CCDC183', 'NT5C1B', 'FKTN', 'ASPN', 'CCL22', 'BOP1', 'MYF6', 'MRPS25', 'NF2', 'YLPM1', 'OLFM1', 'CFAP58', 'APOC3', 'PXDNL', 'CAMTA1', 'TPX2', 'RPAP1', 'EMC2', 'DCLRE1C', 'TRNT1', 'TM7SF3', 'ASPHD2', 'C20ORF194', 'IFIT5', 'PRORSD1P', 'ZC3H12C', 'RAD54L', 'KCNU1', 'SAMD13', 'UBR5', 'CMKLR1', 'PNLIPRP2', 'PDGFA', 'FAM218A', 'ZNF385A', 'ATXN1', 'LRPAP1', 'CDC26', 'HBB', 'ATP11A', 'TLX3', 'CST13P', 'ACTL9', 'MAF', 'VSX1', 'APOBEC3D', 'SNORD115-35', 'GABARAPL3', 'EFCAB10', 'ZSCAN12P1', 'CSAG3', 'SEBOX', 'OR1C1', 'CNTNAP4', 'LINC00636', 'C3ORF38', 'C14ORF79', 'CYP1A1', 'AKR1C8P', 'TNRC18', 'LINC01124', 'SIGLEC14', 'ECD', 'ASCL4', 'C22ORF31', 'MICB', 'BZW1', 'TSSK2', 'NUP160', 'HSBP1L1', 'EHMT1-IT1', 'C11ORF45', 'KLHL1', 'CDK3', 'TRMT1', 'RPS7', 'OXNAD1', 'MARCH10', 'MUM1L1', 'CTU1', 'RTKN2', 'ZNF268', 'CANT1', 'LINC00669', 'PBOV1', 'ARPC3', 'NPY4R', 'S100P', 'GALNT16', 'TIAM1', 'NFATC2', 'IMPG1', 'ATP5L2', 'TMEM92', 'C1ORF115', 'ARMC1', 'CSN1S1', 'SLC25A51', 'CLNS1A', 'DPCD', 'SRSF10', 'PLSCR3', 'GPX8', 'TMEM248', 'DEFB129', 'SLC39A4', 'GREB1L', 'ALPK2', 'CD320', 'ACACB', 'RUNX2', 'EXOC7', 'RCSD1', 'SLFN5', 'WIZ', 'FABP2', 'DNAJB5', 'PPP5C', 'PLD4', 'TUBB1', 'RSAD2', 'GPATCH2L', 'ALOX15B', 'WDR55', 'AKAP1', 'LINC00341', 'TTTY8', 'ATF1', 'SLC35F4', 'NDUFA10', 'DCAF4L2', 'RSPO2', 'SNORD88B', 'SMAD2', 'NHLRC4', 'LINC00662', 'TRMT61A', 'SHANK1', 'RUFY3', 'CETN4P', 'C4ORF45', 'BARX1', 'OPTC', 'LTA4H', 'CACNG2', 'TAZ', 'UBE3C', 'LRRTM3', 'VWCE', 'DNASE2B', 'EED', 'MAP2', 'TMC3', 'SLC28A1', 'FGF14', 'PPAT', 'CD99', 'SNORD115-7', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 1.2387470260059932e-14 NRMSE: 1.9369041138394077e-15 MAPE: 3.576747744845743e-11 Pearson Correlation: 0.05135483883792531 Spearman Correlation: 0.050931616427665596 Coefficient of Determination: -15.353053845809185 RMSE: 2.008464506733477 NRMSE: 0.6619420297717609 MAPE: 1176.1650103098082 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 1.1822430631287688, tolerance: 0.021075629727119613 positive)
Pearson Correlation: 0.9997928312254858 Spearman Correlation: 0.9995951789721202 Coefficient of Determination: 0.9995548593636763 RMSE: 0.013217574235515459 NRMSE: 0.0020666991221195306 MAPE: 22.174427839668766 Pearson Correlation: -0.02191671485555638 Spearman Correlation: -0.047244171300360946 Coefficient of Determination: -10.289001747518766 RMSE: 1.6687546854779232 NRMSE: 0.5499817696519422 MAPE: 896.153574858668 Predictor: RandomForests Pearson Correlation: 0.5980014362822843 Spearman Correlation: 0.5695024879959678 Coefficient of Determination: 0.30719465095425313 RMSE: 0.521445295027979 NRMSE: 0.08153315534797576 MAPE: 314.5409385512582 Pearson Correlation: 0.3218309474366205 Spearman Correlation: 0.35747906292037235 Coefficient of Determination: 0.09307532838902455 RMSE: 0.4729882326673257 NRMSE: 0.15588564783709896 MAPE: 219.3130079264832 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['RAB30', 'LXN', 'ZNF596', 'SLC38A8', 'YPEL4', 'MT1A', 'ADAM12', 'SPATA5', 'GPR89A', 'C16ORF93', 'GJD3', 'PCDHGB4', 'SLC2A9', 'ZNF761', 'HSD17B1', 'SMIM19', 'TTLL2', 'ATP6V1G2', 'TRIM26', 'AGO2', 'CPNE2', 'SNORD50B', 'GYPA', 'SLC35F2', 'ASIC5', 'NDUFS5', 'CCDC54', 'AAMDC', 'MYCBP2', 'KRT6A', 'COX5B', 'BNIP3L', 'MTMR9LP', 'SNORA71B', 'RBM7', 'FOXL1', 'HEXIM2', 'LSM11', 'INHBA', 'CCNA1', 'GPC5', 'ZNRF2', 'TSSK2', 'OTOA', 'FGF23', 'FGF6', 'KRTAP5-8', 'SHFM1', 'SNORA61', 'MTUS1', 'TONSL', 'DENR', 'VPS25', 'DDX41', 'TAF9B', 'FAM92A1', 'HVCN1', 'GYPB', 'OR6C68', 'LRRC40', 'CHST1', 'LOC90246', 'PLN', 'ZFP90', 'GLE1', 'PITHD1', 'HEY2', 'ZNF454', 'RHBDF1', 'ME1', 'BTD', 'TTTY17A', 'SYNM', 'RAB39A', 'SECISBP2L', 'TSNAX', 'NDUFAB1', 'ABCA5', 'AWAT1', 'UPF3A', 'MORN4', 'TIMM17A', 'KIAA0556', 'TMEM138', 'PRDM13', 'HOXA13', 'FAM224B', 'CACNG2', 'TSIX', 'OLFM3', 'L1TD1', 'GSTT2', 'CCR4', 'NFKBIB', 'CCDC101', 'SMARCD3', 'CCNH', 'LSG1', 'HIST1H1T', 'HMP19', 'DMP1', 'GJA4', 'GGA1', 'TUBD1', 'ARID5A', 'SNRPE', 'KRT71', 'ZNF280D', 'RIBC1', 'PSD', 'RAB40B', 'RTTN', 'ATAD1', 'CACNA1D', 'LCE3B', 'LOC285740', 'SCN9A', 'LAMA3', 'SLC16A10', 'KMO', 'LYRM7', 'IFI30', 'ZNF324B', 'HIPK4', 'ABCC12', 'WDR81', 'ATP10D', 'AIG1', 'OBP2B', 'LRRC8E', 'CCKBR', 'DLG1', 'C16ORF86', 'KLF13', 'LINC01512', 'OR52B2', 'PAX9', 'CA11', 'DYSF', 'ATXN1L', 'CCDC186', 'MYLK4', 'MDC1', 'CCDC64', 'RPUSD1', 'GK2', 'DYRK4', 'MTX1', 'CATSPER2P1', 'ADGRG5', 'ING4', 'TIGD3', 'SPDYE7P', 'TSR2', 'PAGE1', 'ASRGL1', 'OTUD7A', 'ABI3BP', 'MMACHC', 'AP5M1', 'CUL3', 'CLDN7', 'IGFL1', 'NAPB', 'HAPLN2', 'TRIM72', 'PCDHB17P', 'PDE4DIP', 'ZNRD1', 'DDX17', 'PSMD3', 'LOC285627', 'TK2', 'COMMD2', 'GPRIN3', 'TSC22D2', 'B3GNT8', 'PMP2', 'DMBX1', 'KAAG1', 'RGS7BP', 'COA1', 'COX5A', 'RFX4', 'FBXW7', 'ACCS', 'MTIF3', 'GFOD2', 'FZD5', 'PRRC2C', 'SENP3', 'CLIP2', 'KCNC1', 'FERMT2', 'PCDHB8', 'BTK', 'KDM5D', 'SETD9', 'TIMM9', 'LCMT2', 'FTH1', 'CDK1', 'FAM183A', 'RARS2', 'CHSY1', 'OSGIN1', 'TELO2', 'UNG', 'VSTM5', 'TBC1D19', 'ARPC4', 'LOC100129550', 'NR1I3', 'GAGE8', 'DBP', 'ANKRD39', 'TMA16', 'ARMT1', 'BPIFA4P', 'KLHL24', 'KIAA1024', 'WBP2NL', 'CLPB', 'PDLIM1', 'PLEKHH1', 'SEPT10', 'AP3S2', 'PSMD13', 'LDHAL6A', 'BCL2L10', 'SSX2IP', 'PNPO', 'RAB11FIP3', 'TEC', 'ST6GALNAC1', 'N4BP2L2', 'VCAN', 'TCOF1', 'TMIGD1', 'ZNF607', 'RIC3', 'GSKIP', 'RNF139', 'LINC00654', 'TYROBP', 'CYSLTR1', 'APP', 'KIAA0930', 'CEP250', 'R3HCC1L', 'SLC27A2', 'BAHCC1', 'IPO8', 'FGF11', 'AP3B1', 'GHRL', 'OR5K4', 'GRIN2D', 'PFN4', 'MYCNOS', 'PLAGL1', 'TECPR2', 'FAM19A3', 'FDXR', 'ZBTB44', 'ZNF853', 'RPL31P11', 'INTS8', 'PNN', 'FAM83F', 'NUDT19', 'ZNF75A', 'RLTPR', 'COL22A1', 'RTN4RL2', 'EPHB3', 'CHD4', 'RND3', 'B4GALT4', 'KLF8', 'WDTC1', 'TRMT10A', 'MAP3K11', 'LY6G6D', 'TNNT2', 'WDR55', 'KIAA0100', 'HTRA3', 'WSB2', 'TCEAL8', 'TMEM108', 'GYLTL1B', 'MVK', 'CLDN22', 'GOT2', 'ZNF623', 'KLHL31', 'TNFAIP3', 'ITGAL', 'PRRG4', 'ZC3H12B', 'PRELP', 'LINC00628', 'AFAP1', 'SELPLG', 'SKIDA1', 'BSPRY', 'MST1P2', 'DKK2', 'E2F5', 'SCN2A', 'DGKG', 'STUB1', 'HIST2H3C', 'N4BP2L1', 'DOPEY1', 'TGM3', 'OCIAD2', 'GLT8D1', 'CXCR2', 'RBM26', 'FKBP15', 'FOXL2NB', 'OR12D3', 'ADAMTSL1', 'LAPTM4B', 'HIST1H4K', 'SSX4', 'STAP2', 'CCDC25', 'SUSD4', 'RAB6C', 'PPARGC1A', 'SLC13A4', 'RPL3L', 'PARP8', 'SECTM1', 'CLINT1', 'DNAJC22', 'ETS1', 'GDF3', 'KMT2B', 'SCARNA12', 'IPPK', 'TMEM104', 'VTI1A', 'CRADD', 'LINS', 'TM9SF3', 'CPXM2', 'AARD', 'LY6G5B', 'TAB3', 'TXNIP', 'KIAA1875', 'JAM2', 'RAB9B', 'TLR9', 'FAM65A', 'ZNF799', 'TMEM140', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.8541175769304451 Spearman Correlation: 0.8209424461495126 Coefficient of Determination: 0.7295168352215349 RMSE: 0.10277363895400021 NRMSE: 0.06648314786203163 MAPE: 241.8746913086276 Pearson Correlation: 0.07727759974160345 Spearman Correlation: 0.06318415664836988 Coefficient of Determination: -5.3317233597679135 RMSE: 0.4648462883665663 NRMSE: 0.465218463137076 MAPE: 465.0709673541677 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.033171247226541745, tolerance: 0.002096995577721637 positive)
Pearson Correlation: 0.8284570293132505 Spearman Correlation: 0.7935270165270524 Coefficient of Determination: 0.6858194165209008 RMSE: 0.11076467700282235 NRMSE: 0.07165246335555765 MAPE: 208.198608927583 Pearson Correlation: 0.12269554819120383 Spearman Correlation: 0.14773698631484292 Coefficient of Determination: -2.4095199470037882 RMSE: 0.34111044622384057 NRMSE: 0.34138355306629364 MAPE: 595.4895385310922 Predictor: RandomForests Pearson Correlation: 0.6329841250936965 Spearman Correlation: 0.5572060542524963 Coefficient of Determination: 0.1775243854613453 RMSE: 0.17921449371460604 NRMSE: 0.11593190438630022 MAPE: 148.09409582577652 Pearson Correlation: 0.20438787391188876 Spearman Correlation: 0.27712695971994034 Coefficient of Determination: 0.03742910097751395 RMSE: 0.1812444704244631 NRMSE: 0.18138958209013523 MAPE: 114.07901896165838 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['ARF6', 'STAT3', 'MLST8', 'UBA5', 'GIMAP6', 'USP36', 'FTO', 'DHRS4-AS1', 'PHF19', 'TIPRL', 'HIST1H4H', 'TNFRSF8', 'PCDHB8', 'C16ORF13', 'PCYT1B', 'MYH8', 'NCL', 'TSPAN4', 'TPSAB1', 'PABPN1', 'NTN4', 'OR5K4', 'NRTN', 'LRTOMT', 'SLC6A4', 'CFAP57', 'ZNF763', 'ELSPBP1', 'GDF2', 'LXN', 'CBR4', 'CSF1', 'MIR100HG', 'TDP1', 'GOLGA6L9', 'SVOPL', 'SPRTN', 'TMEM219', 'SEPT12', 'G6PC3', 'ANKRD34B', 'SERGEF', 'ZNF622', 'RPL23AP64', 'EBF2', 'ENO3', 'FBLN2', 'LINGO3', 'USP43', 'DLGAP1', 'CCDC6', 'CLK2P1', 'MBNL3', 'UBE2QL1', 'CTTNBP2NL', 'AHCYL1', 'SPATA24', 'GDF9', 'GATA6', 'MCM4', 'TTI2', 'CASP1', 'ILF2', 'GMPS', 'PLEKHB1', 'ATG4D', 'RGS22', 'PHKB', 'ACKR2', 'KCNK12', 'RRN3', 'ARMC12', 'UBE4A', 'WRNIP1', 'HLA-DQA2', 'SPAG7', 'ATP1A3', 'CYP3A43', 'TNS1', 'ZNF592', 'ZNF587', 'GCLC', 'C20ORF27', 'HRASLS', 'TMEM87B', 'PGM5-AS1', 'MBOAT4', 'KRTAP3-2', 'TGM1', 'MDN1', 'LINC00032', 'SMARCAD1', 'TTTY6', 'SUCLG1', 'ZBTB21', 'TEX37', 'CSAG1', 'FAM110B', 'ANG', 'FEN1', 'MRC2', 'HMSD', 'CAMK1', 'LYPD5', 'CTDSPL2', 'VWCE', 'RBM24', 'RETN', 'SNORD114-25', 'HOXB6', 'DRAXIN', 'EGR2', 'MESP2', 'ZNF287', 'SCD5', 'ASPA', 'PDZRN4', 'NRARP', 'CRYBB1', 'ARMCX1', 'MARK1', 'GOLGA8B', 'NTSR1', 'PTGES3', 'APOA1BP', 'PPM1H', 'RBMS1', 'BAG2', 'ACMSD', 'POLH', 'PANK3', 'FICD', 'RHCE', 'NAT1', 'FIGF', 'FLG2', 'LOC200726', 'SNORA28', 'CROCC', 'RBPMS', 'ZFP92', 'ELAC2', 'BCAS4', 'RNASEH2C', 'PPM1E', 'OR8H2', 'NOL11', 'CERCAM', 'ZBTB40', 'TMEM160', 'PRSS3P2', 'CCDC127', 'HBBP1', 'RAD18', 'ZNF137P', 'EXOC2', 'PSMG1', 'WASH3P', 'PLIN5', 'CSNK1G3', 'BUB1', 'ARRB1', 'C7ORF13', 'ALS2CR12', 'DYNLRB1', 'DNASE1L3', 'B4GALT1', 'UGT2A3', 'AGFG2', 'ERRFI1', 'SNORD116-24', 'TAAR5', 'ASB7', 'PRDM1', 'RSF1', 'ZFYVE9', 'IWS1', 'MSMB', 'MTMR11', 'TERT', 'TRIM16', 'SP140', 'SLC16A6', 'EZR', 'HAVCR2', 'ADAMTS9', 'PRR22', 'STK11', 'ARHGAP39', 'KRT20', 'ZNF48', 'IGF1', 'TAGAP', 'VENTX', 'CPSF7', 'ATRN', 'SERPINA5', 'PLCD1', 'CDRT15P1', 'LOC256880', 'CCDC43', 'SNORA21', 'BACH2', 'IFNAR2', 'SNX9', 'MRPL45', 'ZBED4', 'RANGRF', 'HMGCL', 'CHCHD3', 'OR5AN1', 'ATP6V1C2', 'MCM3AP', 'PASD1', 'KLF8', 'LRRC1', 'GPR176', 'PLK3', 'CFAP221', 'TBX2', 'NT5DC1', 'ITGBL1', 'ECH1', 'SLC25A43', 'SPRR3', 'NFKBID', 'OR10A5', 'AOC1', 'SEC24B', 'PABPC1P2', 'ETV5', 'CCDC112', 'EDC4', 'TRPV2', 'SH3PXD2A', 'LSS', 'NAA10', 'SSH1', 'LOC284441', 'OR3A4P', 'OTUD3', 'LRRC34', 'DNAJC16', 'MUC5B', 'PPL', 'SLC25A44', 'PCBP3', 'BEND3P3', 'NR1I3', 'H2AFX', 'CLIC6', 'SPATA32', 'IL17RA', 'GPRC6A', 'HECW1', 'TAS2R40', 'NGDN', 'OR2H2', 'GP6', 'C1ORF158', 'GDF7', 'PSG8', 'MAP1S', 'IL1RL1', 'C16ORF90', 'OSBPL10', 'RAC2', 'VCX3A', 'PRO0628', 'EREG', 'LRRC41', 'GTF2H2', 'CXCL11', 'CCT6P1', 'FGFR4', 'LTBR', 'BUD13', 'DLX5', 'BPNT1', 'OSBPL1A', 'EPN2', 'DLX3', 'RFPL4B', 'ZCCHC12', 'ZMYM2', 'KTN1-AS1', 'CUL3', 'DHX36', 'CCND1', 'HINT1', 'MYL12B', 'HTR5A', 'CHRM5', 'CLN3', 'FOCAD', 'COQ10A', 'CTSE', 'HSPA2', 'EXOC5', 'RHBDL3', 'LINC00593', 'BRF1', 'TMEM200C', 'NRIP1', 'PAN3', 'SLC52A3', 'FSHR', 'B3GALNT1', 'ZW10', 'COPS3', 'PEX11G', 'SUGT1', 'ANXA2P3', 'WRAP53', 'TCL1B', 'HIST1H3J', 'HDGFRP2', 'FRRS1L', 'MNAT1', 'PDP1', 'SNORA69', 'GPAT2', 'TMPRSS4', 'ZNF18', 'C1ORF21', 'TYK2', 'DIRAS1', 'EEF2', 'CABLES1', 'CFAP70', 'POU4F1', 'PLAC9', 'CCRN4L', 'RNF24', 'ZNF205-AS1', 'OR5W2', 'COX4I2', 'NAP1L1', 'C17ORF53', 'OR4N4', 'ZNF25', 'ADAM22', 'KCTD16', 'MEGF11', 'SNORD49A', 'RPL13P5', 'UXS1', 'NSFL1C', 'GFI1B', 'LETM2', 'LINC00923', 'C4ORF45', 'PREX1', 'EVA1A', 'PLB1', 'TEPP', 'FAM222B', 'ESYT2', 'ZNF782', 'CHRNA5', 'SSTR4', 'ARPC3', 'FABP5', 'GIMAP8', 'SPOPL', 'CLTB', 'C9', 'RNF222', 'FAM134A', 'PRMT6', 'SCN8A', 'SRMS', 'ZEB1', 'LOC81691', 'KHDRBS2', 'DNAJB8', 'AKAP3', 'RAMP2', 'CEACAM16', 'ZNF385D', 'BDH1', 'ERLEC1', 'CT83', 'GAPDH', 'SUGP1', 'KRTAP5-8', 'HCG27', 'OMD', 'PTPN1', 'TBC1D8B', 'ZNF235', 'CLDN1', 'TRHDE', 'KRTAP11-1', 'FEZF2', 'TUBA4B', 'CKMT1A', 'PUM2', 'SNORD43', 'TAS2R10', 'HNRNPL', 'SDHA', 'SMIM10L2A', 'BTG1', 'LAMTOR3', 'MAP3K7CL', 'ZDHHC6', 'HIST1H4F', 'GSTA2', 'NEUROG3', 'FLJ44635', 'NDC1', 'LIPE', 'PDK1', 'ABHD14A', 'IRX6', 'UBXN11', 'ZNF134', 'RASL10A', 'PLA2G2F', 'KDM3B', 'CENPI', 'FAM185A', 'PKHD1', 'APH1B', 'UBAP2', 'DHX58', 'SNORA24', 'ZNF594', 'AHSA2', 'B3GALT5-AS1', 'HOXB7', 'VRK3', 'WNT7B', 'GSKIP', 'ZNF780A', 'KCTD4', 'HBG2', 'GAP43', 'ZNF418', 'BPHL', 'C11ORF73', 'TMEM26', 'SON', 'TJP1', 'HYAL1', 'IPO5', 'EML3', 'ANAPC1', 'WBP2NL', 'PLEKHO1', 'LIMD2', 'OR4K5', 'GNAI1', 'STAM2', 'ZSWIM6', 'FABP7', 'NLE1', 'SERPINA10', 'PCAT18', 'DMRT1', 'SLC2A1', 'WT1-AS', 'RTL1', 'CLEC3B', 'AKAP1', 'FAM169A', 'SPINK4', 'USP32P2', 'FBXO47', 'TMEM175', 'AP5S1', 'NKX2-4', 'ADCK5', 'TROVE2', 'CACNA1F', 'DUSP5', 'ZNF428', 'XKRY2', 'HMHB1', 'ANKRD32', 'FANCI', 'NTN5', 'FBXO9', 'DIRC1', 'TBC1D10B', 'EARS2', 'INSL4', 'GPR142', 'LMBR1', 'FERD3L', 'TAF9', 'TFE3', 'TYW5', 'MRPS31', 'FASTKD1', 'CCL27', 'PROX1', 'MYT1', 'B3GNT7', 'ZDHHC22', 'PIK3R1', 'ZNF562', 'CACNA1I', 'CAPG', 'CEP97', 'ACADS', 'CAMK2A', 'PIKFYVE', 'TCEAL6', 'PCDHA9', 'LOC285627', 'S1PR2', 'PSPN', 'GJB1', 'POLE4', 'GPR61', 'FLYWCH1', 'HPYR1', 'WAPAL', 'AGO3', 'PRSS48', 'LIN37', 'EMB', 'SGCZ', 'TRIM68', 'BCR', 'RER1', 'HIST1H3E', 'SPEF2', 'NYNRIN', 'LRSAM1', 'FAM168A', 'JPH4', 'LSM8', 'TMEM8B', 'IGFBP5', 'RHOD', 'DDX27', 'NDUFB5', 'HLA-DOA', 'LOC100287704', 'OR6Y1', 'CLIP4', 'POLDIP3', 'DCAF16', 'ZUFSP', 'TNP1', 'SURF6', 'SRCIN1', 'PCNXL3', 'ATF1', 'CCSER2', 'CALML5', 'OSGEPL1', 'COL23A1', 'SNORD116-4', 'EPHB2', 'DHRSX', 'TTC37', 'PFN1', 'RASGRF1', 'EGFL6', 'FOXE1', 'SCRIB', 'HP', 'SYP', 'KCNB1', 'ERP29', 'EDNRB', 'ZNF488', 'TEFM', 'CDKN2D', 'RBM34', 'IL2RA', 'TEKT4P2', 'SDHC', 'ITGB3BP', 'DEFB134', 'KRT25', 'GIMAP1', 'LINC01119', 'TBC1D23', 'PRKG1', 'SNX29P2', 'CTRC', 'RIN3', 'LINC00628', 'LAMC1', 'LRIG1', 'PPAPDC3', 'LOC401127', 'CT55', 'SPEF1', 'DPYSL4', 'C6ORF25', 'NXPE1', 'TCTEX1D1', 'CRIP2', 'RBMS3', 'SLC7A13', 'TRPV3', 'SLC35B1', 'SNORD65', 'EVC', 'B4GALNT3', 'TPR', 'TSPAN17', 'PIWIL3', 'ANKRD9', 'SNORD35A', 'MYH2', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.574166911944385e-13 NRMSE: 5.819298998404848e-14 MAPE: 1.4019122385446873e-10 Pearson Correlation: -0.018672691432494084 Spearman Correlation: 0.0369281045751634 Coefficient of Determination: -304.2566174779463 RMSE: 13.048920803613044 NRMSE: 3.523878153824749 MAPE: 4305.6989202812365 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 6.3901445161210635, tolerance: 0.02218251593097602 positive)
Pearson Correlation: 0.9861403719487921 Spearman Correlation: 0.9809250753484198 Coefficient of Determination: 0.9722347871231216 RMSE: 0.1070948931773172 NRMSE: 0.02421044267600705 MAPE: 91.83426146902792 Pearson Correlation: 0.022933322774194836 Spearman Correlation: 0.19182031021363768 Coefficient of Determination: -18.347622296617452 RMSE: 3.285154898473369 NRMSE: 0.8871603830605912 MAPE: 3976.7922018232007 Predictor: RandomForests Pearson Correlation: 0.6495772441299253 Spearman Correlation: 0.575046106680005 Coefficient of Determination: 0.4132994850493924 RMSE: 0.49229621065398943 NRMSE: 0.11129110673764878 MAPE: 179.80259077828677 Pearson Correlation: 0.6851733089181166 Spearman Correlation: 0.5868008165653522 Coefficient of Determination: 0.42815022236590083 RMSE: 0.5647848387061816 NRMSE: 0.15252088541889863 MAPE: 396.4382550853893 Protein: TP53 x_train_column_count: 1002 x_train columns: ['PAXIP1', 'LOC644936', 'SH3BGR', 'KRTAP11-1', 'LGSN', 'SMAD9', 'XKR5', 'ATP6AP2', 'POLR2H', 'ZAP70', 'AGAP6', 'SHISA6', 'ZNF554', 'SPDYE1', 'PDHA2', 'LOC407835', 'SPOCK1', 'EFCAB8', 'ARSE', 'C15ORF56', 'GALR3', 'FAM43B', 'PPIB', 'ZPLD1', 'TMEM143', 'CHST8', 'DNALI1', 'SPIC', 'ESRRB', 'CDKN2C', 'KHDRBS2', 'GGH', 'SPAG17', 'NFAT5', 'C21ORF2', 'HP', 'KRTDAP', 'SMAD2', 'TRIM55', 'NOL6', 'SLC4A11', 'BST1', 'NAA11', 'FAM71A', 'PTRF', 'ATP4A', 'PLCD1', 'DENND2C', 'ABHD15', 'MGC15885', 'DNAJB1', 'EDN3', 'CMKLR1', 'AMMECR1L', 'MAN2C1', 'BAP1', 'GTF2H4', 'PRSS53', 'TIA1', 'CYB5D1', 'IGF2', 'SPICE1', 'ZC3H7A', 'SCNN1D', 'HTATIP2', 'PARN', 'ZFAND1', 'ANKRD28', 'LOC646813', 'RTN4', 'MPZL1', 'LOC284578', 'RNF135', 'IL5', 'LINC00472', 'GAMT', 'HS6ST3', 'SEC22C', 'RUFY2', 'SNAR-E', 'LHFPL2', 'SNORD45C', 'MLH3', 'GMFG', 'HSPA1A', 'ADD2', 'TMEM200B', 'UCP2', 'ID2', 'LOC440173', 'BCL2A1', 'PLOD3', 'HIGD2A', 'DPT', 'NPFFR2', 'KANSL2', 'CCDC107', 'MLLT3', 'SLC22A2', 'EIF3B', 'FZD3', 'PHOSPHO2', 'ZFYVE27', 'GATAD2B', 'PIP5K1C', 'MTG2', 'HAPLN2', 'NPTX1', 'FUNDC2P2', 'TOLLIP', 'S100A5', 'ZYG11A', 'ZNF619', 'ZNF546', 'C10ORF90', 'OR2T33', 'PKD1L1', 'TACC1', 'S100A7L2', 'HEATR1', 'TTC39A', 'SNORD65', 'RTP3', 'G6PC2', 'VAT1', 'FAM184A', 'FRY', 'UGGT2', 'FGF21', 'ALPK3', 'ZNF808', 'CS', 'SPP1', 'SNORA79', 'PID1', 'CLCN7', 'C17ORF70', 'CHRM4', 'KLHL40', 'FAHD2CP', 'PLAC1', 'DDX31', 'PLEKHS1', 'C19ORF38', 'GPR151', 'PPP1R15B', 'DYNLT3', 'RASGRF2', 'FLT4', 'HSPA9', 'FAM178B', 'SRRM4', 'RPS15AP10', 'ADAM12', 'LY6H', 'SPIN2B', 'OR10A6', 'CD40', 'MPV17', 'CDKAL1', 'CWH43', 'H2AFZ', 'KIAA0907', 'ANXA11', 'MSL2', 'TEX29', 'ZNF718', 'CHCHD6', 'EEF1DP3', 'MAPK1', 'HMGXB3', 'KRTAP10-4', 'ARMC5', 'GTF2IRD1', 'SMC5', 'ZBTB26', 'GLUD1', 'GCSAML', 'IVL', 'PQLC2', 'ITPK1-AS1', 'CD7', 'SOX18', 'RLN1', 'FN3K', 'CKMT1A', 'SNORA70', 'TMOD4', 'TRO', 'BPIFB3', 'C12ORF49', 'C19ORF40', 'ACTL6B', 'GALNT10', 'FLVCR1', 'OR4K17', 'ALPPL2', 'TMEM50B', 'GPR176', 'HMGA1', 'GPR161', 'ATXN7L3', 'ZNF605', 'FMO4', 'WNT3A', 'EBNA1BP2', 'SRA1', 'WDYHV1', 'ANKRD26P1', 'XDH', 'FAM209A', 'GRK1', 'ISPD', 'HOXC6', 'CACNA1D', 'FAM111B', 'SPATA31A6', 'SLC35D2', 'NSMCE2', 'CORO6', 'THUMPD3-AS1', 'BAK1', 'RGS7BP', 'DHX35', 'DPY19L1', 'RS1', 'C11ORF42', 'PNRC2', 'NSRP1', 'RPS6', 'SPOP', 'RNF151', 'WNT8A', 'LMCD1', 'TRIM44', 'MORF4', 'KDSR', 'FOXC2', 'ASB2', 'AP3M1', 'OR2H2', 'GABARAP', 'CWC22', 'OLFM3', 'ZNF558', 'LIX1', 'KCNJ4', 'CEBPE', 'OR10G3', 'NETO1', 'BTG2', 'LIPM', 'IGFL4', 'TPTEP1', 'MAP1LC3B', 'EIF5A2', 'TERT', 'AKT3', 'OPRK1', 'CLDN7', 'MID2', 'ADGRF4', 'HIPK3', 'TM4SF20', 'OR5H15', 'ATAD5', 'RRS1', 'TBCE', 'RTEL1', 'COL9A2', 'TMEM216', 'TMPRSS3', 'APH1A', 'RASA2', 'SPSB2', 'TRIM75P', 'ITGAX', 'OGDHL', 'SECTM1', 'USP1', 'ASAP1', 'SNORD119', 'TTLL11', 'TM7SF3', 'CD72', 'SLC35F6', 'GPR135', 'SNORD115-39', 'LGALS3BP', 'CACYBP', 'OR1N2', 'ZNF844', 'ELAVL4', 'ZBTB43', 'SNORD29', 'PUSL1', 'WDR13', 'FAM78B', 'FBLIM1', 'BAHD1', 'TMEM182', 'APCDD1L', 'ITGB1BP1', 'SEPN1', 'LUC7L', 'TRIO', 'LINC01184', 'NEO1', 'MRPL40', 'TMEM8C', 'KMT2D', 'ZNF439', 'TBL1X', 'MON1B', 'SLC25A53', 'LINC00667', 'MCF2', 'XAGE3', 'CDKN2AIP', 'TEDDM1', 'DNAL4', 'ALDH9A1', 'RANBP9', 'AIG1', 'CAMTA2', 'SLC22A13', 'P3H4', 'OR10H1', 'TMEM41B', 'BARX2', 'TRPM1', 'WDHD1', 'DKK1', 'LOC284023', 'FZD8', 'TTR', 'RPA1', 'ACBD3', 'PDIA3P1', 'POU3F2', 'KCNH8', 'KLHL7', 'SUOX', 'CEL', 'SNAPC3', 'JAZF1', 'PLRG1', 'CYP4F3', 'ENDOD1', 'FBXO24', 'OR8U1', 'EXOSC4', 'CDKL1', 'SCARNA4', 'UBE2J2', 'FEZF2', 'SYT12', 'EBF4', 'NDUFAF5', 'ALKBH7', 'CDH17', 'OR2J3', 'FAM110C', 'LRRC59', 'SPTSSA', 'TSHB', 'CDK20', 'CABP4', 'SLC25A40', 'FBXO27', 'RGS7', 'ZNF233', 'GOPC', 'PRPF4', 'AKR1B15', 'AMPH', 'CTSL', 'SPDYE4', 'RFC3', 'SNORD78', 'MANSC1', 'LOC153910', 'NTN5', 'PIAS1', 'OR5K4', 'TMEM31', 'CBS', 'SND1-IT1', 'STON2', 'RPL30', 'FAM175A', 'SNORD37', 'DOLPP1', 'SDHAF2', 'NIPAL4', 'TMEM187', 'DLG2', 'VAX2', 'SLC52A1', 'SLC19A3', 'INCENP', 'CDH20', 'ERO1L', 'ZNF217', 'MAML2', 'SYNPO2L', 'ST8SIA4', 'SEC24A', 'TMEM38B', 'POP1', 'IRGQ', 'CNNM4', 'MMP13', 'NMT2', 'SPRR2G', 'CSRNP1', 'KPNA2', 'DDO', 'WFDC6', 'KIAA0513', 'C15ORF57', 'MALL', 'LINC00167', 'TRIM5', 'ZNF530', 'ABCA3', 'C1QTNF2', 'MUS81', 'OR2B3', 'PTCH2', 'SLC25A32', 'SPINK1', 'DNAH12', 'CDAN1', 'ALS2CR11', 'SALL1', 'ANKRD13A', 'AQP6', 'LRP10', 'ANAPC15', 'SIPA1', 'LAMC1', 'HNRNPU-AS1', 'SNORA34', 'MTMR6', 'MSMO1', 'EPHX4', 'MST1R', 'KIAA1210', 'MYLIP', 'SLX4', 'ZNF644', 'RNASEH2A', 'P4HA3', 'IL32', 'SNX1', 'C2CD4C', 'KAT6B', 'RHBDL2', 'MAFF', 'C9ORF117', 'STMN2', 'MRTO4', 'GYS2', 'NCK1', 'EBPL', 'LOC440461', 'SSR3', 'ARSF', 'DCAF6', 'HEXIM2', 'HES2', 'ELSPBP1', 'NDUFAF1', 'CD40LG', 'FAM210A', 'LARP6', 'TUBB', 'TMCO3', 'VWA8', 'PTPN4', 'ERC2', 'MIR99AHG', 'SMPDL3A', 'FAM160A2', 'EXOC3L2', 'CREG2', 'ANKFN1', 'ESCO2', 'FXYD5', 'RBM12', 'CDHR5', 'FAM106CP', 'HIST2H3C', 'STEAP2', 'GNPDA2', 'LLGL1', 'IL22RA1', 'DAPK2', 'NDUFB2-AS1', 'KIAA0754', 'SLC44A2', 'DUOX2', 'DMP1', 'PLN', 'PCDHGA3', 'SUPT3H', 'OR2T5', 'UPK3B', 'FUT10', 'PDIA6', 'LBX2', 'TTPA', 'DHX34', 'HACE1', 'ZNF503', 'NUTM2A-AS1', 'PELI1', 'OR4K15', 'IRF2', 'SLC22A3', 'CNGA2', 'SARAF', 'AARS', 'LEPROTL1', 'GLYATL3', 'CLN6', 'BCL9', 'FRZB', 'HOXA13', 'SYK', 'UQCRB', 'SPRR1B', 'VPS35', 'MSN', 'PDLIM5', 'TANGO6', 'C6ORF223', 'FCGR1A', 'ZNF140', 'LINC01566', 'NDST3', 'TMEM179', 'LOC100130093', 'BRDT', 'SPNS1', 'LOC151174', 'HIST1H4G', 'RNPS1', 'TAP2', 'NEMF', 'GCM1', 'SPAG5', 'YAP1', 'CMTM3', 'APOPT1', 'ZHX2', 'RASEF', 'PARPBP', 'CKAP2', 'GPT2', 'TRIP4', 'ATG7', 'AP2A1', 'MTHFR', 'TRIM35', 'PTPRZ1', 'USP44', 'PITX2', 'NUP107', 'NUDT18', 'ITFG2', 'FOXF2', 'ALDH3B2', 'C2CD2L', 'C17ORF102', 'BOLA2', 'NAPSA', 'KIAA1958', 'ADRA2A', 'PLEKHA7', 'CSN2', 'STAT5B', 'C1ORF186', 'NAA40', 'RAB24', 'OR1B1', 'LRRC47', 'QKI', 'ZNF768', 'POLR2D', 'RALBP1', 'ERLIN2', 'JADE1', 'CYGB', 'CAGE1', 'COL5A3', 'LGMN', 'KCNK7', 'SNORD36B', 'TRAPPC4', 'LINC01558', 'EVC', 'XRRA1', 'GTSF1L', 'PGA4', 'RBP2', 'GALR1', 'ST6GAL1', 'MRPS34', 'CCT6B', 'DPF2', 'NLE1', 'ARHGAP39', 'FECH', 'GTF3C3', 'FGF1', 'ITM2C', 'PNMAL1', 'TMEM30A', 'SENP8', 'ARHGEF15', 'CLDN20', 'KLF1', 'UQCR11', 'NPY1R', 'CACNA2D4', 'ZNF737', 'C16ORF70', 'EIF6', 'SELM', 'ARHGAP4', 'CHAC2', 'CCDC62', 'TANC2', 'NCOR1P1', 'CFAP47', 'LRRC75B', 'GFPT1', 'CABP5', 'CCL17', 'PCDHA13', 'HPSE', 'NDST2', 'RASSF3', 'PAPOLG', 'BEND7', 'HIST2H2BF', 'SSBP2', 'PDCL3', 'QSOX2', 'LOC400043', 'RBMY1J', 'AATK-AS1', 'GPR50', 'TMTC1', 'RBBP4', 'SDCBP', 'NXPE1', 'DMRTC1', 'LOC400927', 'GRIP1', 'PDGFC', 'ONECUT1', 'EXTL3', 'SNORD115-11', 'UBE2A', 'SOX10', 'OR10R2', 'BDP1', 'FDPS', 'ADCY5', 'TXNDC8', 'SHOC2', 'TIFA', 'COASY', 'TFEC', 'FBXO16', 'C1ORF106', 'ZNF568', 'TCEAL8', 'OVCA2', 'MSTO1', 'ICAM1', 'EPHA8', 'FANCA', 'SYT9', 'CAPN9', 'TSR3', 'MID1', 'UNC80', 'CMA1', 'MAGEE1', 'DNAH10', 'HIST1H3F', 'RNF141', 'CNOT1', 'GLIS3', 'FAM107B', 'TOP2A', 'MUT', 'LINC00284', 'MYEF2', 'MORN2', 'REXO4', 'OR8K1', 'TNRC6A', 'KRTAP5-9', 'H3F3B', 'PRCP', 'EME2', 'PPARD', 'ANKRD39', 'ARSA', 'LRRC17', 'SPAM1', 'PCMTD2', 'FRS2', 'LOC143666', 'GPATCH3', 'SNORD114-14', 'TXNRD1', 'ZNF131', 'PGRMC1', 'ZNF273', 'PRAMEF8', 'ZNRF2P1', 'DNAJC3', 'ZNF252P', 'LRRC28', 'ZNF674', 'SLC24A5', 'ZNF846', 'CERS5', 'WASF1', 'CLRN2', 'DUS4L', 'NTRK3', 'SNORD12', 'CLMN', 'ATP13A1', 'CACNG1', 'PLEK2', 'LINC00620', 'CPXCR1', 'FAM118A', 'PABPC4', 'CYB5A', 'ARL2', 'PIP4K2B', 'EDNRB', 'GPR157', 'OR4S1', 'ZNF823', 'S100P', 'FMR1-AS1', 'MSRB2', 'RHBDL3', 'APOH', 'CAMK4', 'SCARB2', 'C11ORF96', 'EIF2AK1', 'HRASLS', 'KDM2A', 'RECK', 'HOMER1', 'CNIH1', 'JRK', 'PPP5C', 'ZNF512B', 'HESX1', 'CCDC167', 'FAR2P1', 'LGALS13', 'ATP13A2', 'MTCH1', 'TMEM190', 'SAMD10', 'TMEM176A', 'TMEM39A', 'C6ORF1', 'PARG', 'ORC4', 'FRS3', 'FAM163B', 'HOGA1', 'WWC2-AS2', 'CYYR1', 'ADIRF', 'EMC7', 'CYP2C8', 'LOC644172', 'CATSPER1', 'SUPT20HL2', 'ETAA1', 'RPS19BP1', 'PMEL', 'TRAP1', 'TCAF2', 'PHF10', 'SORCS3', 'CMTM4', 'RNGTT', 'ID1', 'HNF1B', 'PPP1R9B', 'DNAJC30', 'CXCR2P1', 'ZNF526', 'DHX15', 'MS4A12', 'AMY2A', 'NUDT16P1', 'RNF187', 'MAP3K11', 'TMED9', 'SNORD52', 'ARHGAP29', 'LPAR1', 'RC3H2', 'MYOM1', 'OR51B5', 'WWP2', 'C2ORF73', 'SIPA1L3', 'CPSF4', 'RPL28', 'FDCSP', 'USP3', 'SPP2', 'FAM102A', 'FKBP9', 'PPAP2B', 'SP140L', 'EPC1', 'AP2M1', 'C11ORF53', 'HSPH1', 'FAM117A', 'DNAAF2', 'ITLN2', 'ARL5C', 'SNORD27', 'SPACA4', 'HAUS7', 'SNORA24', 'XKRX', 'POU2F1', 'CXORF56', 'TAB3', 'RFX7', 'UFD1L', 'TOR2A', 'FAM217B', 'ZNF221', 'MAS1L', 'LSMEM2', 'BRIX1', 'RPS27', 'SSTR4', 'PWP2', 'RAI2', 'GPR153', 'C11ORF1', 'AKIRIN2', 'ZNF518B', 'SNORD116-26', 'PAX8', 'TOP2B', 'ZNF773', 'FEM1C', 'TXN', 'C14ORF169', 'PALM2', 'HPR', 'PQLC3', 'KLF10', 'ALAS1', 'CSHL1', 'DKFZP779M0652', 'UCN3', 'LILRA2', 'PRKCSH', 'TP53RK', 'UPP2', 'EXOC5', 'SMIM1', 'RAP2A', 'OR13C8', 'FAM53B', 'EIF2B3', 'SUB1', 'SPATA33', 'PRKRA', 'FLJ41941', 'PWRN1', 'PCDHB19P', 'KRT75', 'PSG3', 'KDM5A', 'RNF168', 'FAM27L', 'E2F7', 'LOC100133050', 'WDR91', 'RCC1', 'DSCC1', 'OR52B4', 'PDLIM2', 'NEDD9', 'BTNL2', 'TRPV5', 'NKG7', 'DCK', 'CTHRC1', 'EIF3IP1', 'HOXA4', 'SAMD4A', 'POTEC', 'MGC16275', 'HPSE2', 'DEFB122', 'KATNAL2', 'KRTAP10-10', 'FOXB2', 'ISCA1P1', 'SUGT1', 'DHDDS', 'VAC14', 'MDFI', 'TAF1', 'RANBP6', 'SNORD63', 'CD93', 'RGS13', 'SLC35F4', 'SYT14', 'BGN', 'RSU1P2', 'ECE2', 'FGG', 'DACH2', 'CCDC57', 'ADA', 'GTSE1', 'MLF1', 'FBXL13', 'HACD3', 'SDHC', 'NOXO1', 'MAP3K10', 'MIOS', 'CHST2', 'SAMD4B', 'LGALS12', 'GXYLT2', 'TDRKH', 'HIST3H3', 'PRAMEF9', 'PRR7', 'GTF2B', 'TSKU', 'CLLU1OS', 'KLHL6', 'PATZ1', 'LINC00596', 'NR2F1-AS1', 'CTNNB1', 'ZNF707', 'HAGH', 'PLA2G2C', 'NOBOX', 'DDIT4', 'ABHD6', 'OR6C2', 'SP2', 'ICAM5', 'RABGEF1', 'HFE', 'NCAPD3', 'MVB12B', 'C5ORF60', 'WDR43', 'RAMP1', 'PRRT2', 'MBNL3', 'GATA6', 'OR6T1', 'MTM1', 'ARRDC2', 'NCKAP1', 'SHISA3', 'DUSP5P1', 'ARPP21', 'OXGR1', 'COX11', 'CLEC4D', 'STBD1', 'FAM183B', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.3344719792315793e-14 NRMSE: 3.207094398537802e-15 MAPE: 1.1069565613331544e-11 Pearson Correlation: 0.22918824600957236 Spearman Correlation: 0.3011852502194908 Coefficient of Determination: -11.075393331605147 RMSE: 1.4617015950887906 NRMSE: 0.5256217753564639 MAPE: 3287.8833882169247 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.5520377099244351, tolerance: 0.011010946742365387 positive)
Pearson Correlation: 0.9998589314339278 Spearman Correlation: 0.9996109293232959 Coefficient of Determination: 0.9996943709528193 RMSE: 0.007916304699861718 NRMSE: 0.0019025005286858253 MAPE: 15.07745023588988 Pearson Correlation: 0.26933115316007 Spearman Correlation: 0.35711150131694475 Coefficient of Determination: -10.250160407716042 RMSE: 1.410871417586877 NRMSE: 0.5073434562864099 MAPE: 2281.284035441137 Predictor: RandomForests Pearson Correlation: 0.6501406744015868 Spearman Correlation: 0.5859579590919564 Coefficient of Determination: 0.36609828780485565 RMSE: 0.3605256351122491 NRMSE: 0.0866439882509611 MAPE: 553.9801709174884 Pearson Correlation: 0.49424807168313134 Spearman Correlation: 0.5094283484538095 Coefficient of Determination: 0.24069174897983325 RMSE: 0.3665364231844804 NRMSE: 0.1318049635673632 MAPE: 319.4158413922059 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['STAG3L2', 'KRTAP5-9', 'SNORD115-22', 'GPR39', 'DLK1', 'COBLL1', 'SLCO4C1', 'ELF2', 'HSD17B10', 'SAT1', 'HBA1', 'DDX50', 'RAD54L', 'FGF2', 'FCRL1', 'BLNK', 'STK31', 'SP7', 'NBEAL1', 'LCOR', 'RAP2C', 'MSL3', 'NDUFA13', 'FHOD1', 'LOC284441', 'SMIM24', 'CCDC71L', 'FOXO4', 'SNORD116-11', 'AMER2', 'TTC27', 'SYNE3', 'CCDC115', 'GSTA5', 'CFHR5', 'LRWD1', 'MRPL52', 'FXYD2', 'AKTIP', 'EEF1A1P9', 'TMEM132E', 'SSR2', 'POU3F2', 'MBTPS2', 'SNRNP27', 'ZNF473', 'SLC4A10', 'MED4', 'CLINT1', 'LRRC18', 'PPARD', 'CRAT', 'ZCCHC14', 'DNAJC22', 'PRH2', 'SMARCAL1', 'ME3', 'PSMC1', 'CELF2', 'FAM135B', 'EGFL7', 'MTIF3', 'FAM65C', 'GBGT1', 'OR9Q1', 'PSMB10', 'TNFRSF1A', 'NYAP1', 'SLC2A4RG', 'IL25', 'TRIM42', 'SRSF4', 'UQCRH', 'FCER1G', 'CYB5B', 'ADCY10P1', 'SS18', 'C17ORF58', 'C16ORF87', 'OR13H1', 'STX4', 'CCT8', 'FAM83A-AS1', 'DEFB131', 'OR14I1', 'PACS2', 'ST6GAL1', 'ANKRD54', 'GDAP2', 'IKZF4', 'CD248', 'SUPT3H', 'TUBA4B', 'SNORA27', 'MYEOV2', 'TTI2', 'REEP1', 'NT5C3A', 'COX6A1', 'C12ORF50', 'TMEM55A', 'ATXN3L', 'DCAF12L2', 'SLC45A2', 'ZNF267', 'SNRK', 'GJA8', 'FAM57A', 'USH1G', 'MAZ', 'TRIM24', 'FGD2', 'STAMBP', 'VAMP4', 'PDE8A', 'SLC22A9', 'DHFR', 'ITPK1-AS1', 'ALX1', 'PSME4', 'USP32', 'TMEM40', 'USP17L9P', 'MYOF', 'TUBG1', 'JAGN1', 'ROPN1', 'CCDC163P', 'TBL1Y', 'KLRF1', 'DENND6A', 'DIAPH2', 'EED', 'ZNF575', 'GCLC', 'GLA', 'LSMEM2', 'KIR2DL4', 'LINC00895', 'ISL2', 'NUDT21', 'CHST14', 'PPFIA3', 'VAMP7', 'IDH3A', 'C9', 'PDE6A', 'SNORD115-25', 'DQX1', 'HNRNPU', 'KAAG1', 'UBA6', 'FOXRED2', 'PNN', 'BCAM', 'KLHDC2', 'PLEK', 'PIP4K2B', 'KCND3', 'SCARNA17', 'MMADHC', 'MT1X', 'KRTAP10-8', 'DUSP23', 'ZNF557', 'LILRA2', 'FOXD4L6', 'AMIGO1', 'ADRB3', 'PARD6G-AS1', 'TNFSF10', 'PKD2L1', 'ETFDH', 'PEX26', 'CORO1C', 'OSTF1', 'MANF', 'PALB2', 'BCDIN3D', 'AASDH', 'MAP3K14-AS1', 'GLOD5', 'SARDH', 'RHEB', 'IRX6', 'ZFYVE26', 'G2E3', 'LACRT', 'SPOP', 'TMEM261', 'KCNC4', 'LINC00235', 'TOR2A', 'ZNF483', 'PAX8-AS1', 'GNB1L', 'ZG16B', 'ZNF320', 'ADGRF1', 'CD52', 'CCM2', 'KIAA0125', 'MED11', 'CNN2', 'CST2', 'POGZ', 'GOLGA8DP', 'C18ORF42', 'RELB', 'FAM173B', 'SMPD1', 'LYST', 'ABCA11P', 'RHOC', 'C11ORF42', 'AACS', 'TMED6', 'FAM71C', 'OR2T33', 'EFNA1', 'HOXB7', 'MASTL', 'TRIML2', 'LINC00667', 'SYNJ2', 'SCGB1D1', 'RER1', 'SNORA5C', 'UNC79', 'MTFR1', 'LINC00847', 'PPP1R2P9', 'SNRNP200', 'SFXN2', 'PMPCB', 'PRDX4', 'FMO5', 'CABP5', 'RAX', 'STX12', 'LGR5', 'TECPR1', 'TGM2', 'VRK3', 'TSPAN16', 'UGT1A1', 'CBX8', 'TSNAX', 'RBP5', 'NUP153', 'OR5M8', 'GBA', 'RNF7', 'FZD10', 'C21ORF2', 'FAM183A', 'CTGF', 'LOC728554', 'HOXB8', 'GPR143', 'ELOVL1', 'LOC100129534', 'LCN10', 'NAT9', 'COX8A', 'LGI1', 'NCBP2-AS2', 'FBXO10', 'ZNF439', 'FRMPD4', 'STX16', 'MIS12', 'C4ORF17', 'MRPS23', 'RPL26', 'TTLL12', 'BAHD1', 'OR2T1', 'ZNF418', 'SNORD115-41', 'AGR2', 'TAS2R9', 'MZB1', 'GAPDH', 'CCNE1', 'RSRC2', 'EIF2AK1', 'MDM1', 'PRPF38B', 'RFNG', 'SNORD114-15', 'GADD45G', 'SEPHS1P1', 'PLEKHB1', 'SCN1B', 'STPG2', 'TTC12', 'PLD2', 'TCEANC', 'RIBC2', 'TPRX1', 'ATP2B4', 'STOX1', 'ZNF19', 'ULBP2', 'FCAMR', 'SLC10A5', 'TEPP', 'TEX29', 'SETD3', 'ZIM3', 'WDR38', 'RAPGEF2', 'LOC100134368', 'ESPL1', 'WDR24', 'PBX1', 'AGPAT6', 'ANKRD36BP1', 'HCRTR2', 'SIRPB1', 'LINC00964', 'CTSG', 'RPL13AP17', 'LINC00520', 'FAM13A-AS1', 'ELOVL5', 'ATP6V1B1', 'BMS1P4', 'FAM134B', 'ABCC9', 'TMEM143', 'APOC4', 'PEMT', 'OR5AU1', 'TMEM134', 'ETS2', 'ZCCHC16', 'SNORD95', 'PQLC2L', 'CCND3', 'HRASLS2', 'ATCAY', 'TLR8', 'ATP1B1', 'LOC652276', 'MED29', 'SFR1', 'LMOD2', 'GALNT1', 'ZNF766', 'PTPDC1', 'SEC11A', 'LOC644172', 'ZNF846', 'NHLH2', 'CCHCR1', 'C8ORF82', 'CRHR1', 'BPNT1', 'GCNT3', 'RNF128', 'SERPINA10', 'ZNF154', 'NKAIN4', 'MICALCL', 'SNORD58C', 'PDXP', 'SIDT1', 'HK2', 'CELA3B', 'NR2E3', 'RPL34-AS1', 'OR51F1', 'KCNIP4', 'RPS26P11', 'RAVER2', 'ZNF716', 'CD163L1', 'AGAP6', 'CTNND2', 'RHBG', 'SEMA5A', 'FRS3', 'TPGS1', 'DIRC2', 'SPDYE7P', 'SERTAD3', 'DMXL1', 'HTR2B', 'MLNR', 'TGFBI', 'TBX6', 'CHAC2', 'CRNKL1', 'NBPF15', 'SLC13A5', 'UNKL', 'SUPV3L1', 'FAM35BP', 'ANKRD20A4', 'C18ORF8', 'LPAR4', 'OAS2', 'CHST4', 'ATE1', 'DEFB124', 'PAXIP1-AS2', 'BLOC1S2', 'PSMG2', 'DNASE1L1', 'PRDM9', 'ZNF296', 'LINC00473', 'PPAT', 'FITM2', 'TM4SF18', 'DGKB', 'SERPINF1', 'MAOA', 'TESC', 'C10ORF113', 'ADGRD1', 'DYNLRB2', 'MRPL39', 'METTL2B', 'MYADML', 'IAH1', 'NGFRAP1', 'PLEKHG6', 'NKAIN2', 'RSL1D1', 'C11ORF70', 'ZMYM5', 'ZNF48', 'NPY4R', 'EOMES', 'NUPR1', 'HOXA11-AS', 'PPL', 'PTTG1IP', 'ALDH1A2', 'CLIP4', 'SHKBP1', 'DOT1L', 'ATP5G2', 'PPP1R11', 'SLC45A4', 'KRTAP5-1', 'FATE1', 'CCDC65', 'SNORD77', 'TFAM', 'ARL2BP', 'TRIM6-TRIM34', 'CT45A6', 'ADHFE1', 'CCDC183-AS1', 'OR1S1', 'ADAMTS18', 'ANKRD23', 'PAQR3', 'ZMYM2', 'OXA1L', 'SLC25A19', 'CD300E', 'HAUS7', 'ISX', 'ZHX3', 'GUCY2C', 'PCDHB10', 'SNORD8', 'SGTB', 'OR13C5', 'HBD', 'NRM', 'ARID4B', 'ZNF791', 'TYRO3', 'SPR', 'SRY', 'SLC37A3', 'SSX2', 'LRRC46', 'FAM189A1', 'RHD', 'ZNF226', 'PRR26', 'DIS3', 'CYBB', 'FEZF1', 'BMP3', 'RECQL4', 'AATK', 'ZNF484', 'PFDN4', 'WFDC10A', 'CNOT7', 'GTF3C5', 'KCND2', 'IPW', 'F2RL1', 'MLLT4-AS1', 'ERGIC2', 'MMRN2', 'TRIOBP', 'IMP4', 'IL1RL1', 'CPSF4L', 'SLC2A8', 'IGHMBP2', 'C11ORF95', 'ASCL2', 'KCNC3', 'OOEP', 'MMP19', 'ANKRD53', 'JMJD7-PLA2G4B', 'IGIP', 'AKAP6', 'EFCAB10', 'UBAP1', 'RTN4', 'TMEM194B', 'SNORA29', 'OR4F15', 'USP3', 'DNAH1', 'SMIM12', 'FAM47A', 'GPR34', 'SNORA48', 'AMMECR1', 'PTPRZ1', 'SLC4A2', 'H3F3C', 'PPIAL4G', 'SEL1L3', 'ABLIM1', 'ANTXR1', 'GOLGA2P5', 'SERPINH1', 'DIP2A', 'MRPS35', 'PPY', 'MGEA5', 'PRPH2', 'FAM58BP', 'EIF3F', 'TMEM52', 'CDK5RAP1', 'IHH', 'KLF7', 'CWC27', 'SMN2', 'SCEL', 'CSF2RA', 'FBXO38', 'ABTB2', 'CLEC18A', 'LRPAP1', 'NOP16', 'GHSR', 'SIPA1L3', 'CRTAP', 'THBS4', 'TBL1X', 'VWC2', 'FAM83D', 'SCUBE1', 'KLF1', 'SNRNP25', 'CIZ1', 'PRPF8', 'PAPOLB', 'PAPL', 'METTL3', 'ADORA2A-AS1', 'FAM99B', 'C1ORF174', 'CABLES1', 'POM121C', 'ZBED4', 'GPM6B', 'CT45A2', 'SLC27A1', 'ZUFSP', 'RANBP1', 'KCNJ9', 'OR4P4', 'FKBP11', 'HSD11B1', 'CGGBP1', 'PPP2R3B', 'EPHX2', 'C5ORF51', 'DTX2P1-UPK3BP1-PMS2P11', 'TPRG1', 'COX8C', 'CEP112', 'ADAMTS14', 'SPTB', 'SHOX', 'FUNDC1', 'GRAMD3', 'FAM214B', 'PAX2', 'BRMS1L', 'TMEM241', 'SLC24A5', 'MGMT', 'LIMS1', 'ZDHHC8', 'PITX1', 'PTPRM', 'RASA4CP', 'NTRK3', 'POLR2J3', 'JMJD4', 'AMER3', 'FAM66E', 'SOCS7', 'RALGAPB', 'SOGA1', 'TMED5', 'ZNF638', 'HS3ST5', 'BOLA2', 'LRRC69', 'NAPG', 'IFIT1', 'SLC4A7', 'MT1DP', 'OTOP3', 'ZNF124', 'TTC3', 'TFIP11', 'SSC4D', 'SPRN', 'CLDN7', 'EIF4EBP2', 'FBXL15', 'PDIA2', 'ZNF827', 'CHMP5', 'NME8', 'APLF', 'CYP39A1', 'MKS1', 'ADAMTS9', 'PCDH10', 'SSR1', 'KBTBD8', 'ZNF385D', 'MED13', 'GHRLOS', 'CFAP57', 'TTLL2', 'DAB2', 'SLC25A20', 'PPBP', 'CFAP70', 'MEIS3P1', 'ASPHD1', 'SNORD97', 'WNT10B', 'LOC644145', 'AIRE', 'TTC22', 'ASCL1', 'RAB27B', 'NMNAT1', 'CYP46A1', 'ZNRD1', 'SNORD18A', 'NCKAP1', 'CES1P1', 'ZNF564', 'PVRL1', 'RBM48', 'NUDT15', 'NOXO1', 'SPICE1', 'NEMF', 'IGFBP6', 'GRWD1', 'BMI1', 'RPL12', 'LIG1', 'HOXC4', 'LOXL2', 'MRPL50', 'NEFH', 'SCN4A', 'DDX23', 'FOXD4L5', 'CDH26', 'CHD1L', 'DIRAS1', 'NR1D1', 'MIR1-1HG', 'FAXDC2', 'ADAM21P1', 'ACRC', 'MTMR11', 'PUM2', 'TANGO6', 'HELT', 'KIAA1919', 'DCTPP1', 'PRTFDC1', 'C6ORF52', 'P2RX6', 'TDG', 'HAR1A', 'WHSC1L1', 'GEMIN8P4', 'GLIPR1L2', 'KRTAP4-9', 'ZNF586', 'TRMT2A', 'TSGA13', 'MYOT', 'RPS19BP1', 'TM7SF3', 'CCDC159', 'STAG3L1', 'ABCB1', 'MARK2', 'KRTAP5-AS1', 'ITGB5', 'BAALC', 'SLC39A3', 'ZGLP1', 'SNORD115-45', 'PRKAA1', 'CD8B', 'EXOC8', 'CA1', 'SNAR-D', 'OR51B6', 'LYPD3', 'OTOA', 'MYPOP', 'ZNF283', 'RBM24', 'RGS7BP', 'FLG', 'MEX3B', 'STRA6', 'MRPL32', 'TMEM184C', 'SLC27A4', 'CAND2', 'PCDH19', 'FGD5', 'ANKRD50', 'TNRC6A', 'TBC1D31', 'C17ORF64', 'RUNDC1', 'SNORA14A', 'TRAF1', 'STH', 'WIPF1', 'B9D2', 'KRT1', 'FGFBP2', 'LINC01089', 'TSPY4', 'IFT81', 'ARHGAP21', 'IQCF2', 'DCTN3', 'ST7', 'OR10A5', 'ERN2', 'OR4C16', 'TMEM223', 'COX19', 'SPEF1', 'NTPCR', 'PAPOLA', 'ASPH', 'APOOL', 'NUSAP1', 'LINC00928', 'DUSP6', 'EDDM3A', 'CABP1', 'WDR11', 'CRCT1', 'APOBEC1', 'MALAT1', 'NDN', 'DOC2B', 'LRRC41', 'KRTAP19-7', 'ACAP3', 'SLC22A7', 'MYH1', 'DYX1C1', 'RRAGA', 'FAM153B', 'FAM57B', 'MTTP', 'TSLP', 'MAPK10', 'ITGAV', 'SUMO2', 'KCTD7', 'LOC285768', 'STARD8', 'PTGER2', 'HTRA3', 'KIAA1328', 'H2AFZ', 'SLC14A1', 'BSCL2', 'FYTTD1', 'KIAA1033', 'NEDD4', 'NME1', 'CFL1', 'SUN5', 'GSG1', 'SIGLEC11', 'LINC00652', 'LARGE', 'AHNAK2', 'OSBP', 'RUNDC3B', 'NF2', 'LSM6', 'VAX2', 'S100A16', 'ATP6V0E2', 'FCGR2A', 'MATR3', 'CHID1', 'OR51B2', 'AKR7A2', 'ITGA6', 'ARID2', 'TMEM176A', 'SNAR-F', 'ASIC2', 'SPACA3', 'PKIA', 'GPR32', 'HSPA6', 'SPON1', 'TEX15', 'HIST1H1C', 'STRIP2', 'TAL2', 'RGCC', 'UCHL1', 'ABI2', 'ZBED2', 'RPL28', 'CRYGD', 'C5AR1', 'MED1', 'ACTA1', 'CRB2', 'HCRT', 'TMEM51', 'OR6N1', 'GABRG3', 'INTS4P2', 'ATP1B4', 'ACTR1B', 'LOC100272217', 'CLEC17A', 'ZNF322P1', 'SUGT1P3', 'LPCAT2', 'KIAA0355', 'TGS1', 'FIP1L1', 'NUP205', 'MRPL44', 'OR51A4', 'TMEM190', 'GNG13', 'TSPAN12', 'TRIP11', 'VWA5B2', 'CDKL1', 'OR2A14', 'WTH3DI', 'ARMCX5', 'LARP1B', 'MOSPD2', 'HYALP1', 'FREM2', 'OXT', 'C15ORF39', 'BMPR1B', 'FSTL1', 'RBMX2', 'C15ORF56', 'HSD11B1L', 'CELSR2', 'LMNB1', 'LRR1', 'PRDM15', 'SPACA7', 'UMPS', 'GXYLT2', 'MYO3B', 'SMURF1', 'GATM', 'CGB1', 'FAM63A', 'ATP6V1A', 'HSD17B1', 'KIF4A', 'ZNF274', 'DEXI', 'TSPAN32', 'STAT3', 'FER1L5', 'NKD2', 'ZSWIM2', 'DNAJC4', 'GTF2IRD2B', 'GTF2H2C', 'C1ORF105', 'TRIP13', 'NUP98', 'SYT2', 'GRIN2C', 'PRKCI', 'MMD2', 'C11ORF88', 'HPVC1', 'CDX4', 'RPGRIP1', 'ST8SIA1', 'FCRLA', 'RBFA', 'VAT1', 'TBX18', 'KLHL22', 'C17ORF104', 'ZNF788', 'FAM21C', 'ADORA3', 'ARRB2', 'UBAP2', 'OLIG3', 'RSU1P2', 'TRIM64', 'RPIA', 'ITGA9', 'CANX', 'TAC1', 'SPRR1A', 'EPC2', 'GRIK1', 'ELMOD1', 'STT3B', 'GRAMD1B', 'LPCAT1', 'GYPA', 'KIAA0753', 'AMFR', 'RNY4', 'EEF1B2', 'COA1', 'CERK', 'NXF3', 'LINC00488', 'SLC16A6', 'DRAM2', 'MINA', 'FAM138D', 'SLX1B', 'SFTPD', 'FDX1', 'PSMG1', 'SLC22A4', 'PLA2G7', 'PDLIM3', 'IFT22', 'SYS1', 'TNFAIP6', 'KLRB1', 'FAM66A', 'RABEP2', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.0013721649567722e-14 NRMSE: 4.033642027846852e-15 MAPE: 1.7328071393058e-11 Pearson Correlation: 0.06595798467018635 Spearman Correlation: 0.1588820602868013 Coefficient of Determination: -55.06070797042685 RMSE: 5.622698578585858 NRMSE: 1.395002872670535 MAPE: 1284.7493354023813 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 1.1006133841637655, tolerance: 0.02918679256026189 positive)
Pearson Correlation: 0.9999304094975343 Spearman Correlation: 0.9998840517850883 Coefficient of Determination: 0.9998502608587252 RMSE: 0.009021395275134455 NRMSE: 0.0018182065169467028 MAPE: 7.309743390342064 Pearson Correlation: 0.035822271550600755 Spearman Correlation: 0.042390986245244365 Coefficient of Determination: -18.321015611490512 RMSE: 3.30088572244258 NRMSE: 0.8189564140432145 MAPE: 1288.5560506669062 Predictor: RandomForests Pearson Correlation: 0.6477197399683473 Spearman Correlation: 0.616165901146911 Coefficient of Determination: 0.2859684351724977 RMSE: 0.6229665791481582 NRMSE: 0.1255550676478139 MAPE: 501.3506948884119 Pearson Correlation: 0.5272733704719634 Spearman Correlation: 0.4577455857965077 Coefficient of Determination: 0.1861973187291216 RMSE: 0.6774466066029845 NRMSE: 0.16807587123579232 MAPE: 277.189870391024 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['HCST', 'RITA1', 'RBM15B', 'PGA3', 'PBLD', 'KRTAP9-2', 'CYB5R3', 'FAM66A', 'OR4C12', 'DTX1', 'CYB5R4', 'CCL24', 'HOXC5', 'CERS1', 'MAPRE2', 'GATS', 'ATG4B', 'SPACA6P', 'ARSH', 'GNG4', 'OSGEP', 'UXT', 'USH1G', 'NALCN', 'MAP3K10', 'SBSN', 'ZNF202', 'SUPT20HL1', 'IL4I1', 'LOC93622', 'LEO1', 'PDS5B', 'RNF217', 'ZNF2', 'FGGY', 'SNORD62A', 'SERPINA13P', 'PNPLA6', 'FERMT2', 'FAM132A', 'RAI2', 'GADL1', 'VSTM4', 'EIF5A', 'LRRN4', 'NEDD1', 'ANKIB1', 'PLOD1', 'PDZD3', 'FOLH1', 'HTRA1', 'NTN3', 'C9ORF129', 'MYCNOS', 'FCRL6', 'HOXA6', 'C10ORF91', 'SLC8A2', 'ADCK3', 'KCNJ5', 'GALNT3', 'LINC01020', 'C5ORF60', 'RBM20', 'ZCCHC14', 'TTC13', 'FBXO27', 'LINC00592', 'LINC01300', 'OR51L1', 'SMIM6', 'FMN1', 'HSDL1', 'PHC2', 'SLC16A12', 'PAXBP1', 'TMEM44', 'CLPTM1', 'HMGB2', 'AGR3', 'DLK2', 'CCDC178', 'ADGRE3', 'TMEM110', 'TMCO5A', 'FAHD1', 'KCNQ4', 'EIF4E2', 'VARS', 'BMP8A', 'GALR1', 'ZNF645', 'NRG3', 'L2HGDH', 'PLA2G2D', 'LRP5L', 'ZNFX1', 'ICAM3', 'PDZD2', 'GALNTL5', 'TMED8', 'DCAF6', 'DEFB119', 'NUDT3', 'CALM3', 'FBXO18', 'CASC4', 'FAM58BP', 'DPCD', 'IFNL3', 'PUS7', 'SLC38A9', 'TRIM25', 'LRRC37A', 'QRFPR', 'ZNF70', 'JUNB', 'CCDC77', 'AMPD3', 'ORMDL3', 'NOXA1', 'AKAP12', 'PKN2', 'C9ORF89', 'ZNF398', 'NHLRC1', 'OR6C68', 'GLTSCR1L', 'C1ORF112', 'LOC728613', 'BAZ2B', 'SKA3', 'SUCNR1', 'SEPHS2', 'AOAH', 'NPAS1', 'INSRR', 'SDC1', 'MAGEB16', 'MEF2BNB-MEF2B', 'CLPS', 'TRIM35', 'GDAP1L1', 'GRAMD3', 'DDX28', 'TMEM56', 'NKAIN1', 'DMRTC1B', 'BRINP1', 'SP110', 'C19ORF45', 'C19ORF38', 'MS4A14', 'VPS37B', 'IL17D', 'KCNV2', 'CROCCP3', 'MUC6', 'FBXL16', 'HPVC1', 'FAM197Y2', 'ATP5G3', 'EXOC2', 'MOCOS', 'LCN9', 'HSP90AB1', 'PPIAL4E', 'TRIM36', 'KLF17', 'SNORD115-31', 'GOLGA2P5', 'HSPA1L', 'SFXN5', 'RANBP3L', 'LINC00114', 'GULP1', 'CD180', 'LCE1A', 'PDX1', 'RNFT2', 'SGOL1', 'DEGS1', 'CRTC3', 'PRDX2', 'PNPLA3', 'RPS6KB1', 'P2RX1', 'MANBA', 'HIST1H1E', 'FAM181A-AS1', 'PLEK', 'LYPLA1', 'RAB19', 'ZNF675', 'SNAP23', 'HHLA2', 'POLR2A', 'SKINTL', 'LGALS9', 'PRDX6', 'NOTCH1', 'LARP1B', 'ZIK1', 'TRIM34', 'IPO5', 'OR51B4', 'FAM188A', 'UBXN11', 'ID2B', 'GSTM2P1', 'ZNF74', 'OR52J3', 'SCARNA12', 'ZNF75A', 'C9ORF156', 'DBF4', 'PPIL2', 'LASP1', 'ST13', 'FMR1NB', 'MEOX2', 'DMXL2', 'RNASE1', 'UBE2D2', 'MSH4', 'FYN', 'CEACAM7', 'KIF25', 'ORAI1', 'HCG4B', 'IGFL1', 'OR13A1', 'TMEM125', 'USHBP1', 'SSR2', 'ZNF429', 'C3ORF17', 'VWC2L', 'CWC25', 'PCNAP1', 'RDH14', 'FAM71D', 'TYMSOS', 'COLQ', 'SUSD2', 'NSMCE2', 'LOC100268168', 'LAMA1', 'ACSF3', 'C4ORF45', 'PSMB8', 'ZNF688', 'TRIM9', 'COBLL1', 'ATP8A1', 'KRT27', 'RNASE2', 'TIMP2', 'ZFP36', 'LMBRD1', 'CD63', 'TTTY9B', 'OSBPL1A', 'KRT78', 'SCIMP', 'BRK1', 'MTHFD1L', 'SUN2', 'CAPZA3', 'APOF', 'ST5', 'TSPY4', 'CHRAC1', 'SERPINB7', 'SERPINA9', 'AWAT1', 'PYCR2', 'GPR161', 'DCDC1', 'ABCC6P2', 'ACACA', 'TAAR2', 'CCBL1', 'BAHCC1', 'FOXP4', 'PCDHB15', 'USH2A', 'PNCK', 'FJX1', 'CYP3A4', 'CD99', 'ECH1', 'MEGF9', 'MFRP', 'TXNRD1', 'CDC26', 'NPY6R', 'MRPL37', 'GTF2F1', 'ADGRB3', 'FBXO34', 'SP7', 'NEFH', 'VASP', 'NUTM2A-AS1', 'POU4F2', 'PIGL', 'SLC25A12', 'ZBTB38', 'CLEC18C', 'ESYT2', 'VPS4A', 'ACTN2', 'COLGALT1', 'SPATA24', 'UBQLN1', 'FOXA3', 'ABL2', 'SYT12', 'TGM7', 'LIMCH1', 'SLC16A1', 'SNORD33', 'GUCY1A3', 'GSTA5', 'PCF11', 'JAM3', 'C1QTNF9B-AS1', 'WDR33', 'MAFG', 'RNF19A', 'SPCS3', 'SMCP', 'CYTIP', 'MTMR10', 'RNPEPL1', 'MFSD9', 'SPERT', 'MYBPHL', 'NOA1', 'SUPT16H', 'BPTF', 'MYO1C', 'PTCHD3P1', 'CKAP2', 'OXR1', 'ANP32AP1', 'SPDYE1', 'MMP16', 'ATG16L1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.9587263295820769 Spearman Correlation: 0.87208026987553 Coefficient of Determination: 0.9191561750339209 RMSE: 0.13752245582333697 NRMSE: 0.033188323436382214 MAPE: 33.008988051956095 Pearson Correlation: 0.13994293331836352 Spearman Correlation: 0.38011413520632137 Coefficient of Determination: -15.371786806732352 RMSE: 2.172974801395128 NRMSE: 0.7739892435957713 MAPE: 121.46279613954592 Predictor: ElasticNet Pearson Correlation: 0.9494283571209493 Spearman Correlation: 0.8520828929981037 Coefficient of Determination: 0.9013604233053311 RMSE: 0.15190630240455338 NRMSE: 0.03665958018306185 MAPE: 40.26162441307359 Pearson Correlation: 0.5029230872578424 Spearman Correlation: 0.5245439469320067 Coefficient of Determination: -0.42737629978439395 RMSE: 0.6416170416817736 NRMSE: 0.2285367913381206 MAPE: 71.47950778948095 Predictor: RandomForests Pearson Correlation: 0.8592125258606597 Spearman Correlation: 0.7214535494875526 Coefficient of Determination: 0.7309008461578619 RMSE: 0.2509032915290131 NRMSE: 0.0605505445686254 MAPE: 54.7314814903877 Pearson Correlation: 0.8465246894088339 Spearman Correlation: 0.7071265796637546 Coefficient of Determination: 0.7113605234286724 RMSE: 0.28852570703776786 NRMSE: 0.10276961960383539 MAPE: 42.51670583518446 Protein: CCND1 x_train_column_count: 859 x_train columns: ['PHOX2B', 'ITIH2', 'C12ORF76', 'C14ORF80', 'HS2ST1', 'GUF1', 'HIST2H2BA', 'CEL', 'SLC25A5-AS1', 'PIK3CD-AS1', 'DAB1', 'ZFYVE9', 'DKC1', 'LIX1L', 'CA5BP1', 'F2RL1', 'WDR33', 'BRD7', 'PSMA2', 'CUZD1', 'CCL18', 'NOL4', 'OR8G2', 'MIB2', 'NLGN4X', 'TAF6L', 'GDI2', 'C19ORF45', 'RSAD1', 'RWDD3', 'SLC7A11', 'RPRML', 'GABRP', 'OR10J3', 'CDS1', 'IRF2BP2', 'EXOC7', 'CST2', 'ABHD11', 'PGK1', 'WBP5', 'STK19', 'SAT2', 'CSNK1A1P1', 'DUSP23', 'MLLT6', 'IGSF22', 'FBXL20', 'ZWILCH', 'OIT3', 'CCDC176', 'CST5', 'BCYRN1', 'SCGB2A1', 'PRDX2', 'MBD3L1', 'ZNF543', 'NEGR1', 'CYP4F3', 'GEMIN6', 'VGLL1', 'H1FNT', 'TAP2', 'LRRFIP1', 'SHCBP1', 'LOC401127', 'CCDC107', 'SNORD114-16', 'PLB1', 'SEC61G', 'ROPN1', 'DEFA1B', 'PCDH7', 'TRIM78P', 'PPP3CB', 'POTEF', 'XYLB', 'TPD52', 'HSD17B4', 'THBS2', 'CHPF', 'PCDHGA1', 'CFAP57', 'NUB1', 'TTC28-AS1', 'METTL13', 'COX7B2', 'PBLD', 'HTR7P1', 'SYTL5', 'SEC22A', 'CRYGA', 'RASSF1', 'ATP1A1-AS1', 'MTHFD1L', 'BBOX1', 'TRAPPC5', 'ZBTB5', 'INS-IGF2', 'GRIA1', 'OR5B2', 'DNAH3', 'C9ORF50', 'CLK4', 'DOCK11', 'SNORA28', 'SNORD66', 'VBP1', 'DFNB59', 'GOLGA3', 'PSMD9', 'SEH1L', 'C7ORF50', 'TNS4', 'ERCC1', 'DGKI', 'ZNF385A', 'LRRC25', 'PABPC4', 'RAP2C', 'MIER2', 'STK26', 'PFKFB3', 'PCDH11Y', 'RBP1', 'FAM182A', 'AP1S3', 'EDRF1', 'TSPAN33', 'HCCS', 'STX3', 'THAP10', 'RNF114', 'CAP1', 'EPS8', 'OS9', 'ZNF674', 'GPX8', 'GRB2', 'TMPRSS2', 'C1ORF204', 'ZDHHC17', 'TCF7', 'PVRL2', 'COG1', 'OTOP2', 'HES2', 'TTC9C', 'ZNF263', 'SUOX', 'KRT9', 'ZNF717', 'TONSL', 'THUMPD2', 'LINC00982', 'ZNF24', 'ZMYND10', 'LIPG', 'EXTL2', 'GID8', 'CHRNA4', 'MKNK1', 'GNG12', 'RDH10', 'ZNF750', 'PIK3C2G', 'SEPT1', 'P4HTM', 'PTPRR', 'GAK', 'UBE2MP1', 'ITGB4', 'C20ORF194', 'ZNF593', 'SRCAP', 'TMEM230', 'FES', 'MAPKAPK5', 'AQP3', 'RAD1', 'OCA2', 'CD40', 'ERBB2IP', 'RALGDS', 'CLTA', 'C1QL1', 'SPOCK1', 'RAD51B', 'GATM', 'RBPMS2', 'ZNF767P', 'VDR', 'PHKB', 'FIZ1', 'NXF1', 'VIT', 'SRP72', 'ARHGEF1', 'OAZ3', 'FAM83A', 'CPNE5', 'CIDECP', 'ESF1', 'MT4', 'SOX15', 'CHIC1', 'KIAA1755', 'HIST1H4C', 'IL4R', 'SERPINE2', 'FAM208B', 'NBPF22P', 'FAM96A', 'SNORD126', 'SWI5', 'TSIX', 'OR56A3', 'ZNF714', 'OSGEP', 'F2R', 'NAA15', 'ARHGEF3', 'PRMT9', 'NACC2', 'IWS1', 'IL12B', 'UBXN10', 'PAPOLB', 'PSMD12', 'FUBP3', 'TMEM182', 'NANOS3', 'HBG2', 'RPL6', 'SEMA3D', 'CCNB1IP1', 'SNORD86', 'DCUN1D4', 'SERPINB6', 'LRRC70', 'PTPRS', 'NAA30', 'WNT8A', 'CDK16', 'MTMR4', 'TEX13B', 'CCDC65', 'MAP1B', 'DHRS7', 'CYP17A1', 'TRIM9', 'SMG8', 'TADA2A', 'NUDT13', 'ALG3', 'CDC45', 'CC2D1B', 'C4ORF45', 'INPP5D', 'MED13', 'RGS9', 'IFNLR1', 'OR2C3', 'BRDTP1', 'KIF18A', 'PTGES3', 'STC1', 'CDC42SE2', 'ULK4P3', 'MAZ', 'AGMAT', 'BPIFC', 'SMARCA1', 'TOE1', 'GCAT', 'CXADRP2', 'LHX2', 'ROBO3', 'KRTAP12-1', 'FLYWCH2', 'C1QL3', 'SNORD81', 'LIN7A', 'KCNK12', 'OR2L2', 'SMAD9', 'AKAP10', 'ATP5L', 'SERPINB2', 'C1ORF110', 'RCVRN', 'CSGALNACT2', 'FOXR1', 'RABL2A', 'C21ORF62-AS1', 'ZNF331', 'DPY19L2', 'PFN1P2', 'TFAMP1', 'OR10R2', 'LYZL6', 'EDDM3B', 'PMS2P3', 'GFI1', 'RNASEH2B', 'SLC7A7', 'SKINTL', 'ZNF333', 'SPTSSB', 'MUC16', 'RAB39B', 'APOLD1', 'MIR1-1HG', 'OR10P1', 'MX2', 'GPR176', 'ZNF786', 'CLCN1', 'IGFLR1', 'ZBTB20', 'LEO1', 'OR5M9', 'STAC3', 'TMEM120B', 'CX3CR1', 'C11ORF74', 'SMIM20', 'WDR64', 'ANKRD28', 'CCDC7', 'ARID1A', 'NR1H2', 'BCAS4', 'PGC', 'RCN3', 'KDR', 'TMED1', 'DGCR2', 'RUVBL1', 'PGK2', 'LINC00152', 'CACNG5', 'GTF2A2', 'FTMT', 'ZACN', 'C1GALT1C1', 'PAX8-AS1', 'OSCP1', 'TPRA1', 'ARL15', 'AGR3', 'SNORD114-30', 'FCGR2C', 'ZBP1', 'ANXA2P2', 'HDC', 'CNPY4', 'ARL4D', 'CCDC183-AS1', 'TMEM8A', 'EVI5L', 'LOC613037', 'KRIT1', 'GDNF', 'KPRP', 'CLDN2', 'AGBL4', 'C10ORF67', 'SNORD111B', 'P2RY2', 'ZNF426', 'GYPA', 'GCSAM', 'SETD6', 'CLU', 'AMPH', 'TBC1D5', 'TMEM256', 'METTL18', 'TAS2R13', 'EXOSC7', 'TACC2', 'LIMS2', 'GAGE8', 'IER5', 'SP1', 'ADORA2B', 'SNORD85', 'SUGP1', 'PRAMEF20', 'SCGB3A2', 'LHFPL3-AS2', 'MMP15', 'KRTAP20-4', 'DCDC2B', 'HAL', 'FAM63A', 'XIAP', 'KLHL34', 'EPS8L3', 'RGS20', 'ZNF789', 'TNFRSF4', 'PDE1B', 'HEATR1', 'GREB1L', 'TMIGD2', 'HADHA', 'ZNF572', 'PSMA1', 'LGALS9C', 'SYT5', 'CRIP2', 'SS18L2', 'FAM66D', 'SCARNA8', 'LBX2', 'CALR', 'SRSF11', 'BIN3-IT1', 'LIPF', 'OPN1MW', 'RCAN1', 'RAB5C', 'JAM3', 'YEATS2', 'DNAJA1', 'TREX1', 'SPATA31A5', 'MRPS33', 'DHRS9', 'ATRIP', 'RAD9A', 'YY2', 'C15ORF62', 'PEX16', 'KCNAB2', 'UBA6', 'FAM175B', 'RPP14', 'TCAF1', 'FAM131B', 'PRELID1', 'CATSPERG', 'SPAG8', 'ZNF645', 'GSTO1', 'PRKCE', 'EPHB3', 'SNORA53', 'MATR3', 'SELM', 'SNORD115-44', 'TBX15', 'XPO5', 'CYP1A1', 'NGRN', 'CLN6', 'ARFIP2', 'HSPA1B', 'IDS', 'APOC1P1', 'AP3D1', 'EIF2S2', 'ERMARD', 'OR6K2', 'ILF3', 'RPRM', 'TMEM98', 'ZNF292', 'RITA1', 'OTOR', 'OR10H2', 'SLC25A28', 'MSTO2P', 'ARL14', 'ANKRD35', 'PTTG2', 'PPIL6', 'SNORD116-11', 'RERGL', 'ADCY2', 'UBE2D1', 'DIAPH2', 'MDFIC', 'KRT73', 'PILRB', 'SLC22A25', 'PRCD', 'EPHX3', 'MAN1C1', 'CYSLTR2', 'FAM184A', 'CPTP', 'OR4N5', 'KNG1', 'CSTA', 'OR4C6', 'CLEC2L', 'ELMOD1', 'ARPC2', 'G3BP1', 'ISY1', 'TSNAXIP1', 'PPP3CA', 'ARMCX1', 'TOP1P1', 'FCRLA', 'PCDHB7', 'CAMSAP3', 'SAP30BP', 'SPRR2C', 'CDNF', 'FPR3', 'IKZF2', 'CEP83-AS1', 'PEX11A', 'NRM', 'LINC00910', 'CP', 'CHRNA1', 'FRYL', 'RAB35', 'ANKRD22', 'TNXB', 'STIM2', 'OR2C1', 'CLIC5', 'MAP4K3', 'RAN', 'TSSK1B', 'ADAMTSL5', 'POLR2I', 'PPAPDC1B', 'SLCO2A1', 'GPR68', 'PPP1R26', 'SPEN', 'GTDC1', 'LRRC45', 'DEFB132', 'MAPK10', 'RNFT2', 'RAP1GAP2', 'PALMD', 'CLPS', 'PPP1R14A', 'POSTN', 'NEMF', 'KRT82', 'ELOF1', 'CDC6', 'SNORA30', 'NPS', 'CCDC36', 'HIST1H4L', 'C10ORF131', 'GSE1', 'MEFV', 'CREBZF', 'PCDHB8', 'IL2RA', 'ITGA9', 'SEMA5B', 'GDF2', 'HPDL', 'PIM2', 'GNA11', 'LSM3', 'UGGT2', 'AURKB', 'ZNF436', 'ID2B', 'ZKSCAN1', 'RFX5', 'PRSS57', 'WEE2-AS1', 'WBP1L', 'SRSF1', 'SNORD115-45', 'CKMT2', 'RBM26', 'BDKRB2', 'CDKL1', 'TP53I13', 'TNFRSF13C', 'TECTB', 'TTLL5', 'ABHD17C', 'TCAF2', 'ZNF577', 'PRCP', 'NACAP1', 'IDH1', 'RPL21', 'HAND2', 'PCSK6', 'FBXL8', 'NRADDP', 'CD274', 'B4GALNT2', 'PEG10', 'LSM6', 'CDC37', 'ZW10', 'CRCP', 'SLC17A4', 'DGKA', 'LRRC6', 'FAF1', 'HRNR', 'EMC6', 'STYXL1', 'G6PC3', 'EFHD1', 'PDGFA', 'LOC344967', 'SYNJ2', 'MTX2', 'CSTF2T', 'COL21A1', 'CD3EAP', 'FAIM2', 'IFNK', 'GRM6', 'ATP1A4', 'PTRH1', 'LRRC47', 'CIAO1', 'RTN3', 'ZFYVE28', 'ANKRA2', 'ODAM', 'MAB21L2', 'MAATS1', 'PABPC5', 'RPS7', 'COQ9', 'DERL2', 'CENPK', 'EIF5B', 'BPIFB3', 'TNFRSF13B', 'KHDC3L', 'C4ORF17', 'ARNTL2', 'ZUFSP', 'EPB41L4B', 'PRR14', 'TSR1', 'NCR2', 'MRGBP', 'IRGC', 'PSMA6', 'SH3RF1', 'CA9', 'EPHA3', 'ST13', 'GCNT1', 'SPACA6P', 'FBLN1', 'POLR3H', 'UGT2A3', 'IFNB1', 'TUBB2A', 'SUSD5', 'TSEN54', 'GCLC', 'RNMT', 'MESDC1', 'NICN1', 'GCA', 'GALP', 'RNF150', 'PECR', 'GOLGA8A', 'LINC00242', 'VEGFC', 'TSPAN3', 'MGC72080', 'SNORA31', 'ZNF221', 'DNAJB11', 'SNORD17', 'PACSIN1', 'ARHGAP18', 'SNORD115-32', 'RASGEF1A', 'OGFOD1', 'BTBD17', 'PYCR1', 'HLA-DRB1', 'SPRY2', 'LOC389705', 'RAB38', 'DBF4', 'ATP5O', 'CLEC11A', 'EVL', 'ALDOB', 'SNRPE', 'HOXC12', 'SPRR3', 'PATE4', 'KLC3', 'BCL10', 'TBC1D25', 'IL9', 'PFDN2', 'TNMD', 'LGALS14', 'UBQLNL', 'ZSCAN10', 'CT45A2', 'MGST3', 'SEPT10', 'FCGR1A', 'POM121L2', 'LOC389332', 'ETAA1', 'C9', 'ADGRE4P', 'C1QTNF2', 'KRT6A', 'SLC25A23', 'SH2D4B', 'MAN2B2', 'GRIA3', 'TSHR', 'MAT2B', 'ELOVL2', 'SYCP3', 'PTPRO', 'ADRM1', 'WDR47', 'MAP3K4', 'ZNF585B', 'POU6F2', 'MRPL55', 'C3', 'ZNF800', 'BCLAF1', 'FAM217B', 'DDAH2', 'BIVM', 'C4ORF48', 'KRT31', 'GPN2', 'IRF9', 'FAM195B', 'IRF7', 'LRRC71', 'RPP25L', 'SPRR2F', 'DNMT1', 'AFG3L1P', 'HS3ST5', 'FAM150A', 'C8ORF86', 'RSPO4', 'PPP1R3F', 'ZNF253', 'SIRPA', 'RALGAPB', 'IFITM2', 'SOCS1', 'LIMD1', 'NFS1', 'LOC284023', 'AMPD2', 'COA3', 'HSPA12B', 'YBX1', 'DDX27', 'NMB', 'MED6', 'SEMA3F', 'PABPC3', 'PRKAB2', 'C1ORF226', 'BCL11B', 'TSPYL4', 'NDUFA7', 'GABPA', 'C19ORF12', 'SDC4P', 'ICE1', 'CWC27', 'SNORD27', 'DIP2B', 'CAPZB', 'GPD1L', 'MEG8', 'PAPLN', 'RHPN2', 'NR0B1', 'L3HYPDH', 'PLAT', 'B3GNT9', 'MSX1', 'PDK3', 'MCM2', 'SPTBN4', 'COL7A1', 'KIAA1257', 'SIRT2', 'PGAP2', 'CD33', 'MS4A13', 'SLC25A20', 'LRRK2', 'CARTPT', 'IL6ST', 'CCDC64', 'ATP6V1G1', 'KBTBD7', 'KCNC1', 'FBF1', 'FAM150B', 'FAHD2CP', 'PCNA', 'C12ORF73', 'SNORD38B', 'EPS15L1', 'EBPL', 'UFC1', 'YEATS4', 'STH', 'BOC', 'PDC', 'C3ORF38', 'ZNF814', 'LOC145474', 'HMP19', 'INMT', 'PWAR1', 'SCARB2', 'NLRP4', 'SNORA71B', 'UBN2', 'DHX37', 'MED17', 'NAIP', 'HAND1', 'TRAP1', 'NRIP2', 'IGF1R', 'PLBD1', 'TUBBP5', 'HDAC5', 'PSMD14', 'ZNF835', 'SEPT7P9', 'PCGF2', 'FHOD3', 'MUTYH', 'ERBB4', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 6.934669346464192e-15 NRMSE: 4.168922669238191e-15 MAPE: 9.01886727433352e-12 Pearson Correlation: 0.008517634647232056 Spearman Correlation: 0.027636328163106044 Coefficient of Determination: -11.881364211731752 RMSE: 0.8432404381822909 NRMSE: 0.6005643825012043 MAPE: 6763.23057637167 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.3973514573264728, tolerance: 0.0030646775987981157 positive)
Pearson Correlation: 0.9992062103103075 Spearman Correlation: 0.9989565048120642 Coefficient of Determination: 0.9982644515673115 RMSE: 0.00995230376115852 NRMSE: 0.0059830372131864 MAPE: 15.437965356547382 Pearson Correlation: 0.10644846786054879 Spearman Correlation: 0.12337820700419472 Coefficient of Determination: -6.430139045391846 RMSE: 0.640426015977491 NRMSE: 0.4561178964001275 MAPE: 5981.522754564558 Predictor: RandomForests Pearson Correlation: 0.566265718009083 Spearman Correlation: 0.5539153397844583 Coefficient of Determination: 0.26132545057517387 RMSE: 0.2053202678083602 NRMSE: 0.1234326074042396 MAPE: 329.7871688615501 Pearson Correlation: 0.5060619458910673 Spearman Correlation: 0.5277729002048581 Coefficient of Determination: 0.23092120502428315 RMSE: 0.2060420745475153 NRMSE: 0.14674525279721617 MAPE: 995.0001150653113 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['CRABP1', 'C3AR1', 'MED30', 'ZNF804B', 'BEAN1', 'GDF6', 'CELSR2', 'CPLX3', 'GPR4', 'C16ORF54', 'CLP1', 'LINC01555', 'OR51E2', 'SRSF12', 'CACTIN', 'FANCM', 'CHTOP', 'PFN4', 'LYZL4', 'SLC13A5', 'SMNDC1', 'NETO1', 'LINC00643', 'MORF4L1', 'CDC37L1', 'ZFYVE21', 'C14ORF166', 'CAPN10', 'GPA33', 'ELOVL2', 'FLJ16779', 'GRIK2', 'CLGN', 'AJUBA', 'EMC6', 'KRTAP13-1', 'EPC2', 'ARHGAP30', 'KRAS', 'TMCO5A', 'ABCC6P2', 'DEPDC5', 'ENSA', 'SAR1B', 'C7ORF43', 'ANAPC16', 'ARCN1', 'OR13A1', 'HBA2', 'ALCAM', 'CYMP', 'AP2S1', 'HOXD12', 'SREK1IP1', 'CLPP', 'CLIP2', 'EXOC3-AS1', 'XIST', 'UBQLN4', 'RHBDF2', 'DPP10', 'DCDC1', 'KRTAP1-3', 'TNFSF14', 'RPS6KA3', 'USP12', 'RRBP1', 'AKT3', 'ARAP3', 'NCKIPSD', 'TNFRSF6B', 'MLYCD', 'PARPBP', 'MED12', 'TMSB4Y', 'HRSP12', 'SLC4A1AP', 'TLX1', 'EGF', 'DTNBP1', 'FAM214B', 'TUBA1C', 'KPNA7', 'SNX2', 'MAGEA1', 'ZSCAN32', 'LOC340017', 'BMP7', 'GPI', 'SNCG', 'METRN', 'VPS29', 'BMP5', 'KIAA1875', 'GFM2', 'RHBDF1', 'RPS5', 'KCNJ14', 'ZMYM5', 'ZNF587', 'AFF1', 'ZNF408', 'RBP1', 'ARX', 'TPTEP1', 'CROCCP2', 'IFRD1', 'C12ORF77', 'RASSF8', 'FARS2', 'EPOR', 'ZFP14', 'CSN2', 'CDRT1', 'SDHAP3', 'CYP2D6', 'CEBPA-AS1', 'OR11L1', 'NRP2', 'LOC100132215', 'ZC3H11A', 'MAP3K19', 'CASP6', 'SNORA49', 'MGMT', 'ATP5J2', 'LOC90784', 'ZNF395', 'ZDHHC17', 'HCFC2', 'CDH17', 'TULP2', 'AGR3', 'CABP5', 'VTRNA1-1', 'VTN', 'COL26A1', 'ITPK1', 'ISCA2', 'CHRNG', 'KLHL35', 'GPR45', 'CD59', 'LOC440173', 'NCF4', 'CXCL3', 'MAS1L', 'CLEC4C', 'TRIM61', 'SRP14P1', 'MBD1', 'ANKIB1', 'SERTM1', 'WDR13', 'TNNT2', 'OPN1LW', 'NME3', 'DEPDC1B', 'HLA-DPB1', 'DET1', 'GPR61', 'VPS28', 'SLC27A4', 'EXOC7', 'SNORD115-2', 'RNF20', 'HDC', 'SPCS3', 'TEX14', 'SEC23B', 'BOLA2', 'HDAC2', 'VWA5A', 'BLM', 'RNPEPL1', 'PRAMEF17', 'A2M-AS1', 'CPTP', 'NGFRAP1', 'REM1', 'CLDN8', 'SORL1', 'POU2AF1', 'MAML2', 'NUP153', 'CEP170B', 'RPS26P11', 'LRGUK', 'TMEM86B', 'CCDC113', 'TMC6', 'FADS1', 'MAB21L3', 'SNORA23', 'C12ORF43', 'AIM1', 'SPTBN2', 'PAX1', 'FAM189A1', 'USP25', 'LINC00882', 'COMMD8', 'FAM9C', 'ZNF841', 'INO80', 'KDM8', 'CLIC4', 'GJA9', 'ZP1', 'EIF1AX', 'PDCD2', 'NAA38', 'CDCA5', 'GCNT2', 'OR2L2', 'ZKSCAN7', 'IRX1', 'TRAF5', 'KRT23', 'SSR4', 'FERMT3', 'STRA6', 'TBC1D3P1-DHX40P1', 'ARMS2', 'IGIP', 'KRTAP17-1', 'CDH16', 'ATXN1L', 'MRPL23', 'FAM66E', 'SLC28A1', 'MTERF3', 'CIITA', 'TMC1', 'INGX', 'GATA1', 'ZKSCAN5', 'GOLGA8IP', 'DYNLRB2', 'VCAN', 'HIPK1', 'GPR141', 'KLHL3', 'C10ORF95', 'CEACAM18', 'KALRN', 'FAM126B', 'PROZ', 'NF2', 'NAGK', 'PEX6', 'COL1A1', 'MB21D2', 'SP110', 'NUCB1', 'SUPT20HL2', 'ATRX', 'FOXL2', 'THG1L', 'PSME1', 'ARV1', 'RAB42', 'IL7R', 'SDR42E1', 'C6ORF47', 'ERH', 'YAF2', 'DYX1C1', 'IL23R', 'PYGM', 'RNASEL', 'ICAM3', 'SNX15', 'KLRG2', 'HPVC1', 'PTTG3P', 'TNIP3', 'ENOSF1', 'KRT13', 'TAF1', 'RBM41', 'KCNV1', 'MT1E', 'FOXB1', 'GBX2', 'CCP110', 'NOVA2', 'GGA3', 'AUTS2', 'OR1J2', 'SERINC5', 'COPS7B', 'MRPL4', 'INPP5D', 'TTC17', 'ETV6', 'C3ORF20', 'KIAA0895L', 'PRKD3', 'ZNF772', 'CMAS', 'FN3KRP', 'SNHG15', 'ELAVL1', 'IGF2-AS', 'INSL4', 'PCGF5', 'XPOT', 'HSD3B2', 'SNORD19', 'KLHL8', 'LY6G6F', 'GKAP1', 'EIF3D', 'TUSC5', 'FAM171B', 'GAB2', 'TMEM31', 'SLC8A2', 'ARHGAP9', 'DGCR5', 'SRRM1', 'BAX', 'KCNB2', 'SEPT12', 'ARL1', 'KLK4', 'CYB5D2', 'APOBEC4', 'NKX6-2', 'PAX8', 'MSTO2P', 'TNS2', 'C9ORF139', 'OR9I1', 'MTM1', 'WRAP53', 'ZBED3', 'TTBK2', 'PTPMT1', 'TECPR1', 'KDM6B', 'USP16', 'HRNR', 'YTHDF2', 'TPD52L3', 'LYRM7', 'OR4D2', 'SLC44A2', 'RPL36', 'TMEM107', 'OR10W1', 'CHN2', 'C19ORF57', 'HSPB6', 'MCRS1', 'SNORA66', 'RPAIN', 'FSCN3', 'C22ORF39', 'PAPOLB', 'KIAA1191', 'MMD', 'LINC00628', 'FAM107A', 'CYP1A1', 'JMJD6', 'CCDC137', 'POLR2A', 'TAOK2', 'SIGLEC12', 'SNORD49B', 'RFPL3', 'TMEM189-UBE2V1', 'PI15', 'OR6K6', 'HAO1', 'ANKRD36', 'RORB', 'PROCR', 'ADGRG5', 'CCL8', 'ZDHHC16', 'GNL3L', 'LRRC14B', 'PIF1', 'DHX33', 'ZBTB38', 'AIFM2', 'NPR2', 'S100A5', 'ZNF20', 'MLH3', 'EBI3', 'SFMBT2', 'RGS9BP', 'STOX2', 'MMACHC', 'OR14A16', 'NACC1', 'APOA4', 'ATM', 'LINC00112', 'SCARNA18', 'ARRB2', 'PAPOLG', 'C1ORF61', 'TAS2R8', 'PTCHD3P1', 'NTN4', 'MTHFSD', 'NR1I2', 'PTPRCAP', 'SATB2-AS1', 'RNF126', 'SMCHD1', 'MYO18A', 'SLC43A1', 'HAO2', 'RDX', 'SNORD23', 'CCDC102A', 'COLEC12', 'DPH3P1', 'UNC5D', 'FZD10', 'SEPN1', 'BMP10', 'STAG3', 'NDUFA1', 'CTH', 'UMPS', 'UGT2B10', 'ART5', 'WASF3', 'TET1', 'APBB1IP', 'ZHX1', 'CNTROB', 'ELF5', 'TRMT13', 'RPL28', 'KIF3B', 'PGA5', 'AS3MT', 'C2ORF57', 'MRPL51', 'TBC1D2', 'MRC1', 'MMS22L', 'WDR5B', 'TRIM6', 'METTL22', 'TONSL', 'OR52A5', 'MND1', 'PROK1', 'NOL11', 'C12ORF4', 'TMEM220', 'METTL24', 'SPC25', 'DNMBP-AS1', 'BLID', 'SMEK3P', 'MUTYH', 'CAPZA2', 'NCOR2', 'EXT2', 'CD47', 'LYL1', 'KLHL4', 'PRIM1', 'ALDH1L2', 'PRPF18', 'VSX1', 'C1ORF162', 'MAP3K10', 'C9ORF72', 'GALNT7', 'DRAP1', 'HKDC1', 'IMMP1L', 'IKZF3', 'IFIT2', 'CD70', 'SMARCA5', 'NKX2-1', 'GTPBP2', 'GEMIN8P4', 'OR51G1', 'SNRPB2', 'CFI', 'SLC39A11', 'BANF1', 'VLDLR', 'MGC16275', 'FBXO24', 'TINF2', 'OSTC', 'TAF13', 'NEUROD1', 'MTNR1A', 'CFAP58', 'CBLB', 'RGL3', 'PIGZ', 'GABPB1', 'FAM45A', 'MMP25', 'DLX6', 'EPHX2', 'FAM160A1', 'SPATC1', 'TWISTNB', 'ZDHHC21', 'SNORD72', 'STK36', 'LOC100129034', 'RNH1', 'BLOC1S3', 'CDK19', 'OR8H2', 'HCN4', 'KRTAP20-4', 'FUT3', 'CLEC1A', 'SDK1', 'WDR18', 'OR6C2', 'SLC17A9', 'MRPL52', 'NINL', 'OR3A3', 'OR6B3', 'IRF8', 'ADGRF4', 'RGS11', 'PEMT', 'FAM127C', 'ZNF43', 'ZMYND19', 'ZNF441', 'FBXO9', 'CDC42EP3', 'GSTA1', 'CGB8', 'LINC00937', 'MIR205HG', 'SLC17A3', 'BTBD2', 'PIP4K2B', 'TPM3P9', 'DENND5B', 'TMEM212', 'SCCPDH', 'LCE4A', 'AKT2', 'FOCAD', 'OPA3', 'OLA1', 'SPIB', 'WDR25', 'MEPE', 'CLDN14', 'PLCL1', 'CACNA1B', 'RGS13', 'GIP', 'SNORD44', 'CALR', 'ECE1', 'RNASE11', 'CRYL1', 'FIP1L1', 'IDE', 'FUT6', 'MRPS9', 'LINC01547', 'WDR27', 'SLC25A35', 'PCDHA8', 'CD200R1L', 'TM9SF1', 'TG', 'P2RY10', 'TRAT1', 'NXF1', 'C20ORF27', 'FAM114A1', 'ZC3H18', 'FAR2', 'BPY2', 'EEF1E1', 'FAM186B', 'TGIF1', 'TMEM63C', 'FAM32A', 'LPAL2', 'SOAT1', 'SNORD115-14', 'MRPL12', 'GIGYF2', 'RBM11', 'EBNA1BP2', 'NANOS1', 'ZFAND6', 'VSIG2', 'RRP1', 'TEX12', 'CDYL2', 'FBN3', 'PSPC1', 'ZNF618', 'SSX5', 'DNTTIP2', 'ST13', 'LINC00410', 'CRISPLD2', 'RHOT2', 'GFPT1', 'QPCTL', 'GOLGA7', 'NKPD1', 'FNDC7', 'C17ORF51', 'GOT1', 'EFR3B', 'FAM181A', 'NPHS2', 'HOXD8', 'TTLL2', 'CBX3', 'PRDX6', 'TEFM', 'FAM69A', 'SCAPER', 'GRK4', 'SDCBP2', 'HLA-J', 'CCL24', 'ZYX', 'RAMP3', 'ITGB3BP', 'CLEC1B', 'HS6ST2', 'GJA10', 'CT45A3', 'ATP5I', 'TMUB1', 'RHBG', 'ARL3', 'NELL2', 'TMEM184A', 'STK39', 'ANKHD1-EIF4EBP3', 'H3F3AP5', 'ZBTB37', 'GBP4', 'SLC6A10P', 'N6AMT2', 'TMEM217', 'VEGFA', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 5.062619169094681e-13 NRMSE: 8.625004973158222e-14 MAPE: 2.3063130344828223e-10 Pearson Correlation: 0.17231021077250347 Spearman Correlation: 0.20515071700321919 Coefficient of Determination: -21.550689316752976 RMSE: 4.307314498731493 NRMSE: 0.798686167018634 MAPE: 5300.438821098629 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 3.821411842685273, tolerance: 0.05577498909165362 positive)
Pearson Correlation: 0.9982214917037844 Spearman Correlation: 0.9947927723480267 Coefficient of Determination: 0.9964264972386813 RMSE: 0.06092277334112809 NRMSE: 0.010379197120999044 MAPE: 46.956248453468866 Pearson Correlation: 0.30364728836188315 Spearman Correlation: 0.30025363379182524 Coefficient of Determination: -10.571412134828597 RMSE: 3.085459520527446 NRMSE: 0.5721230336598269 MAPE: 3836.2255172310947 Predictor: RandomForests Pearson Correlation: 0.8538046334809909 Spearman Correlation: 0.7103445941732767 Coefficient of Determination: 0.7236995639940886 RMSE: 0.5357021498698797 NRMSE: 0.09126567795115248 MAPE: 396.71640473380535 Pearson Correlation: 0.8039717298196324 Spearman Correlation: 0.7273113045366097 Coefficient of Determination: 0.637672813455971 RMSE: 0.5459805013343627 NRMSE: 0.10123873564516275 MAPE: 251.27079991663913 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['CCDC105', 'DNAH2', 'LACC1', 'TNNC1', 'GSTM2P1', 'FAM167A-AS1', 'RASSF3', 'TOPBP1', 'DYNLT3', 'FAM74A3', 'ELFN1', 'SMEK3P', 'FMO3', 'NPHS1', 'NOL11', 'MAP2K5', 'BOLA1', 'WFDC13', 'CSRP2', 'BTN2A3P', 'HIST1H3E', 'MEP1B', 'SNRNP200', 'NHLRC1', 'ARRDC5', 'COBL', 'HOGA1', 'IL17C', 'TRABD', 'MAS1', 'METTL3', 'MICAL1', 'CNP', 'CLSTN2', 'INTS4P2', 'MAPK6', 'KIF1BP', 'RAB40A', 'KDM7A', 'CABP4', 'ARC', 'HKDC1', 'RCOR3', 'PTGIR', 'CSMD1', 'GAGE1', 'MYO6', 'SRRD', 'COL6A2', 'RNF31', 'IQCD', 'IPO9', 'AGER', 'CELF1', 'FAM13C', 'PAGE2B', 'CALCB', 'GAS2L1', 'GOSR2', 'TFPT', 'SDC1', 'HLA-DRA', 'VASN', 'PPP1CA', 'CREBBP', 'CECR5-AS1', 'TUBD1', 'TSPAN16', 'PHOX2A', 'ALOX12P2', 'MMADHC', 'ZNRF1', 'SAV1', 'CP', 'KLHDC3', 'RIC1', 'MRGPRD', 'FGFBP3', 'PDZD2', 'SUV420H1', 'VSTM5', 'NEU2', 'WHAMMP3', 'OR56A4', 'ZNF18', 'SCNN1B', 'C9ORF89', 'ZSCAN23', 'MATN2', 'TOX4', 'PAQR8', 'SNORA77', 'PPP1R7', 'LILRA5', 'RMND1', 'KCNK17', 'LRP8', 'OCLM', 'GPR179', 'MBD4', 'BACH1', 'NKX2-8', 'CREB3L2', 'TRMT1L', 'PTGS2', 'TAOK1', 'TRIM61', 'HLF', 'MED6', 'LOC392196', 'NUBPL', 'ERCC3', 'ZNF800', 'STKLD1', 'PFKM', 'KLHDC7B', 'SGIP1', 'TEKT4', 'ATG5', 'PLCXD3', 'ZNF99', 'TMEM255B', 'ARHGEF2', 'EGFEM1P', 'MRPL13', 'QTRTD1', 'MUM1L1', 'ABCB10', 'EPM2AIP1', 'KRT24', 'SUZ12', 'CEP76', 'LYZ', 'ACIN1', 'SELM', 'GPATCH8', 'LOC100132111', 'IPO5', 'CTAG2', 'MTM1', 'LDLR', 'MKKS', 'TMEM200B', 'LMCD1', 'LY6G6C', 'TSTA3', 'ZNF83', 'TDRG1', 'ZNF296', 'GATA3-AS1', 'FGF4', 'GIN1', 'NEIL3', 'FHOD3', 'TADA1', 'KLHL26', 'TMEM53', 'RIPK1', 'CMPK2', 'SH3GLB1', 'DYNLL2', 'C4ORF29', 'ZDHHC6', 'THAP9', 'CLEC12B', 'MCMDC2', 'DEFB105A', 'MC4R', 'LMF1', 'DMXL1', 'MUL1', 'EXOSC1', 'ARMCX1', 'C1QTNF2', 'ZFAND2B', 'ARNTL', 'GLUD1', 'MAP1S', 'NUFIP2', 'PABPC3', 'SPTB', 'NDUFA9', 'SLITRK5', 'GNB4', 'FAM63B', 'LEP', 'PEAR1', 'PXDN', 'NGLY1', 'NLRP12', 'ARFGEF3', 'PLEC', 'TPP1', 'UQCRFS1', 'SYNGR3', 'ATP6AP2', 'PRSS3', 'TWF2', 'CPNE9', 'RTN4R', 'SNORD50A', 'ADORA1', 'TAF10', 'AQP4-AS1', 'CHD8', 'CLEC4A', 'ZNF30', 'OR52H1', 'GDAP1L1', 'KCNJ6', 'AQP12A', 'GHRH', 'HILS1', 'DHH', 'LINC00320', 'TCERG1', 'MYO9B', 'CSN1S2AP', 'PRMT5', 'CACNG1', 'DBI', 'ANKMY2', 'MCOLN3', 'SCARNA15', 'SNORD42B', 'THSD4', 'SKIV2L', 'POP5', 'ABR', 'UNQ6494', 'SDHAF2', 'HOOK3', 'KCNE3', 'S100G', 'CCDC88C', 'RELN', 'SNAI2', 'NKTR', 'ZNF641', 'RPS26P11', 'CDS2', 'ITIH1', 'FAM171B', 'CHD5', 'RLN3', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.73253111424873 Spearman Correlation: 0.7260783523225586 Coefficient of Determination: 0.5366018333424858 RMSE: 0.3125507274288731 NRMSE: 0.08434847062015698 MAPE: 216.46307511530978 Pearson Correlation: 0.21504033579120235 Spearman Correlation: 0.2548559346113672 Coefficient of Determination: -1.5916928943932227 RMSE: 0.7494268596494853 NRMSE: 0.3007137822810274 MAPE: 472.63011055412284 Predictor: ElasticNet Pearson Correlation: 0.7206636057359616 Spearman Correlation: 0.7208951473588512 Coefficient of Determination: 0.5192436218761227 RMSE: 0.31835075613435615 NRMSE: 0.08591373189753422 MAPE: 214.76740699386062 Pearson Correlation: 0.23732317146952836 Spearman Correlation: 0.23669426969858307 Coefficient of Determination: -1.079044629376054 RMSE: 0.6712269593681907 NRMSE: 0.26933541962321467 MAPE: 442.3050077486023 Predictor: RandomForests Pearson Correlation: 0.5612287425303115 Spearman Correlation: 0.5598784079468171 Coefficient of Determination: 0.2914403788751313 RMSE: 0.3864840345132731 NRMSE: 0.10430094819638888 MAPE: 238.16107060101976 Pearson Correlation: 0.3910197492075754 Spearman Correlation: 0.4129407044934107 Coefficient of Determination: 0.14419353996031348 RMSE: 0.43065080707861797 NRMSE: 0.17280223062669248 MAPE: 289.78660860826113 Fold: 2 Protein: RB1 x_train_column_count: 371 x_train columns: ['TBC1D13', 'STX10', 'GPIHBP1', 'RIPPLY1', 'C1QBP', 'C16ORF70', 'DPAGT1', 'SLC25A52', 'CSRNP3', 'SMTN', 'PGM2', 'LIX1', 'GTF3C5', 'NFE2L3P2', 'LOC148413', 'FHIT', 'RNF212', 'LY6G5B', 'MRPL39', 'KLHDC4', 'CEP85L', 'PDHA2', 'GZMA', 'ANXA7', 'PHF21A', 'PDK4', 'YAE1D1', 'SLC27A4', 'CLCN6', 'CEP89', 'TSSC4', 'BTNL9', 'SOGA1', 'GABARAPL3', 'TYK2', 'C4ORF3', 'FAM186B', 'PSMA7', 'GUCY2GP', 'SNORD114-14', 'RNFT1', 'ZNF586', 'LRRC23', 'SNORD115-8', 'EIF4EBP2', 'STK17B', 'MFSD1', 'MTMR14', 'EID2B', 'FBF1', 'FAM19A2', 'BUB1B', 'SMUG1', 'GLT8D1', 'CES4A', 'MPP2', 'BMX', 'LRP1', 'GIMAP5', 'SIX2', 'ITPRIPL2', 'FLJ37201', 'FCRLA', 'SDHAP2', 'PCP4', 'RSL24D1', 'ZNF30', 'CRCP', 'MIR31HG', 'TSR1', 'PPP2R5C', 'OR52B6', 'RSAD2', 'IAH1', 'NUP205', 'CDH2', 'C8ORF74', 'AGPAT5', 'GSTM4', 'SPRR1B', 'PAPSS2', 'ARHGAP11B', 'IMPAD1', 'PIP4K2C', 'FUBP1', 'NCAN', 'OSBPL7', 'DAZAP2', 'LINC00957', 'PIWIL1', 'BRCC3', 'SNORD8', 'TMEM145', 'SLC25A32', 'DES', 'RGN', 'CENPE', 'ZNF675', 'LOC153684', 'HAUS5', 'JMJD1C-AS1', 'DUSP10', 'ZYX', 'SEPT3', 'XKRY2', 'IFI27L2', 'ZFHX3', 'COA7', 'HMGB4', 'CHCHD3', 'OR2W5', 'NCKAP5L', 'ZNF492', 'PRKACB', 'DDX46', 'ZBTB33', 'F8', 'ZNF536', 'TOP3A', 'GLTP', 'KRTAP3-2', 'MKS1', 'ALDH3A2', 'C1S', 'MIS18BP1', 'PDLIM5', 'TOM1', 'TIAF1', 'EBPL', 'ABO', 'LAGE3', 'LY75', 'ERGIC1', 'SERTM1', 'HADHB', 'DGKG', 'SPRR2E', 'ARHGAP5', 'DAGLA', 'PIGZ', 'OR10R2', 'POMGNT2', 'SIX4', 'ASCC2', 'MIR600HG', 'KIAA0907', 'KCNQ5', 'SMIM20', 'ZNF263', 'FARSA', 'NLRP5', 'TMED10P1', 'BRICD5', 'MNT', 'ATG14', 'FAM150B', 'MYRIP', 'SLC17A9', 'NOTCH2', 'C19ORF40', 'RAB11FIP2', 'AREG', 'CIRBP-AS1', 'GRN', 'CLTA', 'CBLN2', 'PCDHA1', 'NRK', 'DHRS12', 'SNORD117', 'TUBA1C', 'ADD2', 'DHX38', 'GIMAP7', 'LONRF2', 'CLTCL1', 'KCNK7', 'AGAP3', 'LRIT1', 'KTI12', 'CITED1', 'CD200R1L', 'SYNPO2', 'THY1', 'GRAPL', 'CHIA', 'KLC1', 'CDK5RAP3', 'C15ORF48', 'EID3', 'ATXN7L1', 'MAFB', 'HOXD13', 'CDC42EP4', 'VMAC', 'CHPT1', 'NPTXR', 'GPATCH2', 'VWA8', 'MDGA2', 'ZAR1', 'HS6ST2', 'ZNF766', 'CACNB1', 'GFI1', 'TINAGL1', 'NKX2-1', 'ANGPTL1', 'KHDC3L', 'KLRC4', 'KIAA0196', 'MAPKBP1', 'FAR2', 'DSPP', 'KDELC2', 'HOXA13', 'AAGAB', 'RHBDF2', 'GMPPB', 'IGFALS', 'EFNA5', 'ZNF692', 'LINC00628', 'CEACAM19', 'TPP1', 'TRIM14', 'SNORD115-39', 'FBXO43', 'ARIH1', 'USP3', 'HMGB3P1', 'MDM4', 'SULT1C2', 'ACSS2', 'NIT2', 'ANKRD30BP2', 'AZI2', 'BTBD19', 'D2HGDH', 'MIEF2', 'DRC7', 'PLBD1', 'PLK5', 'FAM210B', 'MPRIP', 'TMX1', 'LEMD3', 'ASL', 'TOP2B', 'TTC9C', 'ACSL6', 'ITFG1', 'GGT1', 'OR2D3', 'MAML3', 'TRIM29', 'OR1E2', 'STX8', 'CDC26', 'LMCD1', 'STX3', 'OR51M1', 'LINC00696', 'SPAG5', 'MAGI1', 'AP3B2', 'BBOX1', 'CPVL', 'EYS', 'TRIM3', 'EPSTI1', 'SCNM1', 'ZC3H13', 'PRCC', 'PUSL1', 'PRDM13', 'IP6K3', 'ID2', 'AZGP1', 'PLIN4', 'HDDC3', 'SNORD115-25', 'SP110', 'GLIS3-AS1', 'WDR60', 'ZG16B', 'EMB', 'PTPRE', 'LOXL1', 'NUDT16L1', 'DTHD1', 'DACH1', 'ETV1', 'NOXO1', 'TMEM39B', 'ELP2', 'HECW1', 'DPY19L1', 'TPTE2P3', 'PRKCD', 'DEFB125', 'ABCA13', 'CDC14C', 'CSF3', 'TRPC6', 'FABP5P3', 'POMZP3', 'SFXN5', 'RAD50', 'PRAM1', 'POLR2K', 'DHRSX', 'UGT1A9', 'BEAN1', 'MYOT', 'MIR503HG', 'MEIS1', 'ADCY2', 'CFDP1', 'NANOS2', 'TM9SF1', 'OR13J1', 'CERKL', 'AFP', 'GPX3', 'ZNF407', 'RIMS4', 'KIAA0226', 'RNF7', 'LINC00336', 'GPR139', 'DR1', 'DSG1', 'ZNF84', 'ZP3', 'FAM129C', 'LINC00698', 'ALKBH8', 'TCP10', 'TNC', 'RARB', 'A4GALT', 'KLHL42', 'NUP188', 'DUX4L2', 'CEP44', 'OR6V1', 'ADRBK2', 'C20ORF85', 'IFIT1B', 'EOMES', 'IRX2', 'CCSAP', 'RPGRIP1L', 'GBAP1', 'SF3B4', 'ZNF876P', 'GDNF', 'ID1', 'ZNF684', 'SLC13A2', 'PLCL2', 'MMAA', 'CHMP6', 'AMOT', 'WFIKKN2', 'SLC12A3', 'GDF10', 'PLCB1', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.8229978805583843 Spearman Correlation: 0.7707000397071773 Coefficient of Determination: 0.6773255114035927 RMSE: 0.13351381212655347 NRMSE: 0.04882746201234402 MAPE: 455.57121925536376 Pearson Correlation: -0.12098879488837498 Spearman Correlation: -0.05697980684811239 Coefficient of Determination: -2.970135234138615 RMSE: 0.4879761480654301 NRMSE: 0.2795752014216808 MAPE: 2446.9654693566263 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.018054979211573396, tolerance: 0.0029666208701464043 positive)
Pearson Correlation: 0.7814005898121451 Spearman Correlation: 0.7232981630858395 Coefficient of Determination: 0.6097248961567696 RMSE: 0.1468349044505035 NRMSE: 0.053699131235555704 MAPE: 509.7182326768858 Pearson Correlation: -0.04227563168917463 Spearman Correlation: -0.049502487562189064 Coefficient of Determination: -1.6879990641133134 RMSE: 0.4015230678551364 NRMSE: 0.2300438105757562 MAPE: 2008.5941523289378 Predictor: RandomForests Pearson Correlation: 0.5958757800171167 Spearman Correlation: 0.4566143035821656 Coefficient of Determination: 0.2081771897329232 RMSE: 0.20915000784172005 NRMSE: 0.07648844640203338 MAPE: 162.42257055583912 Pearson Correlation: 0.09478673670693294 Spearman Correlation: 0.15867778269707689 Coefficient of Determination: -0.012552742682063078 RMSE: 0.2464363521285086 NRMSE: 0.14119028779807072 MAPE: 170.882044880205 Protein: CDH1 x_train_column_count: 836 x_train columns: ['TTC22', 'KCNH1', 'TMEM211', 'CATSPERG', 'LPA', 'MFI2', 'FLJ45079', 'LBR', 'CSMD1', 'F12', 'ENOX1', 'SLC7A14', 'ACTR3BP2', 'LIMK1', 'NDUFS6', 'SNORD115-27', 'DGCR6', 'NDUFAF2', 'GCNT4', 'SLC35F5', 'OGN', 'CLEC3B', 'DGKH', 'HOXA5', 'TTC19', 'TMEM130', 'ERMP1', 'SRRM5', 'CHRM3', 'GPR146', 'FRYL', 'TUBB2B', 'NPTX1', 'NR2F1-AS1', 'MPST', 'TTLL13P', 'PRRT2', 'OTUD6A', 'COA4', 'RPL13AP17', 'M6PR', 'TRIM37', 'SNX15', 'TTC31', 'EPHA2', 'RPS4Y1', 'BEAN1', 'CCNB1', 'TACC3', 'EIF3K', 'OR8B2', 'C4ORF33', 'OCRL', 'TRIM52', 'TBCEL', 'DTNBP1', 'TMEM135', 'WDR18', 'H2AFX', 'TMCO4', 'CCNJL', 'CYP46A1', 'CXCL16', 'PILRB', 'GPR87', 'DDX56', 'AOC4P', 'THNSL1', 'CSNK1G2', 'FAM81A', 'KLK10', 'FAM58A', 'IGDCC4', 'SPDYA', 'CC2D2A', 'NEDD4', 'EFCC1', 'ZNF768', 'DEFB114', 'SYBU', 'TLCD1', 'CKS2', 'PSMD4', 'CSRNP1', 'CYTH2', 'WDR83OS', 'CASP3', 'OR6Q1', 'ZNF595', 'MRPS34', 'MRPL23-AS1', 'ZSCAN30', 'PDLIM1', 'PSG9', 'PPP1R2', 'SGPP1', 'PWWP2A', 'MBTPS1', 'SLC50A1', 'SEPT1', 'VCX3A', 'TXNDC9', 'ATRIP', 'TSPYL5', 'ATP6V1B2', 'CNGA3', 'SAR1B', 'NUP54', 'OR2K2', 'DUX4L5', 'SNORA27', 'GFRA1', 'FDPSP2', 'RAB13', 'SEPW1', 'CA14', 'LYPD6B', 'KRTAP20-3', 'TRAM2', 'ZNF697', 'SNORD86', 'CFH', 'TCP10', 'TLE4', 'ACOT2', 'SNORD91A', 'CERKL', 'FGF6', 'CBLN1', 'CWC27', 'B3GNT2', 'CAPN10', 'NGFR', 'SUMF2', 'AFM', 'PNLDC1', 'RPS6KA1', 'SERPINB8', 'KCNE3', 'LOC256880', 'ZFP28', 'NOL4L', 'ATP9A', 'GALNT9', 'PPY', 'ADGRF4', 'DFNA5', 'ZNF283', 'USP6', 'OR10J3', 'LINC00696', 'AMBP', 'FAM65C', 'MLKL', 'WNT11', 'CARKD', 'CLRN1-AS1', 'SH3RF2', 'PCDHGC3', 'ARSJ', 'TARM1', 'MLN', 'DCAF8L2', 'EPO', 'ERICH4', 'EIF3A', 'TUFT1', 'EEF1G', 'RIMBP3C', 'KCNT1', 'ACAD10', 'CHRND', 'BCDIN3D', 'STK10', 'PHOX2B', 'AK3', 'SNAR-A4', 'AGPAT5', 'RHBDF1', 'JMJD1C', 'FGFR1', 'LINC00202-1', 'RPL34-AS1', 'RTL1', 'C2ORF66', 'ZNF136', 'KLLN', 'SAMD4A', 'MRPS36', 'SLC7A5P1', 'GPX7', 'ZNF324B', 'NFKBIA', 'DOHH', 'CSTF2T', 'MAL2', 'C1ORF95', 'FZD8', 'PRTG', 'TIFAB', 'CAMSAP2', 'C19ORF38', 'RAC3', 'SUN3', 'DICER1', 'MS4A8', 'LINC01548', 'UBAP2', 'ZNF221', 'RFX8', 'DNAH3', 'GCOM1', 'SRGAP3', 'CDC14C', 'C11ORF94', 'PSMD8', 'AOX2P', 'TEKT1', 'IL17RE', 'NANOS1', 'CUEDC1', 'GAS6', 'GAMT', 'BTN3A3', 'SNORA2A', 'CCL15', 'ADAMTS12', 'SOGA1', 'DNAH8', 'GRM1', 'OSBP2', 'KIAA1211L', 'D2HGDH', 'ZBTB17', 'SLC6A4', 'EPHX1', 'ZNF133', 'C8G', 'MACF1', 'PTK7', 'HHEX', 'RPL23AP7', 'CHMP2A', 'MATR3', 'FAM101B', 'CXORF49B', 'LYAR', 'ARPC1B', 'KRTAP12-3', 'MTF2', 'MAP3K9', 'ALOXE3', 'RBL2', 'RGS16', 'ZNF562', 'TRADD', 'CDKL4', 'SNORA37', 'FAM199X', 'ADAMTSL4', 'PML', 'CTIF', 'LPIN1', 'TBC1D9', 'SIAH2', 'CREBRF', 'MRGPRG', 'TRPC3', 'TESK2', 'LTB4R2', 'PSMD7', 'PQLC2', 'SNORD10', 'WRAP53', 'LINC00264', 'C1ORF52', 'MFSD6L', 'TMEM132B', 'DPP10', 'ZMAT4', 'PGM2L1', 'AMER3', 'OR2F1', 'ZNF295-AS1', 'RHOD', 'FUT1', 'WDR61', 'HOXD12', 'LCE1B', 'SLC2A9', 'HMBS', 'CDK9', 'PLEKHA1', 'SUGP2', 'UBA52', 'LAPTM5', 'MYH15', 'CD6', 'IL1RN', 'C10ORF10', 'CLN3', 'AANAT', 'CRELD1', 'DNTTIP2', 'CERS1', 'TREM2', 'NASP', 'CACNB3', 'GOLGA3', 'TREML4', 'CDHR1', 'HRAS', 'KHDC1', 'C17ORF49', 'PGLYRP4', 'AP2A2', 'TMEM244', 'GEMIN5', 'TAS1R1', 'FAM168A', 'ADAR', 'IRGM', 'SRPK2', 'GFRAL', 'RILPL1', 'HECTD3', 'SMIM7', 'LRRC20', 'PRKAG1', 'HIBCH', 'CST4', 'ASH1L-AS1', 'FOXO3', 'FERD3L', 'SOHLH1', 'CTBP2', 'PSMG3', 'PEAK1', 'FAM111A', 'IGFL1', 'BARX1', 'EYA4', 'ARFGEF2', 'TNFSF18', 'RAC2', 'ZNF45', 'PSME4', 'CMTM6', 'ARID4A', 'PAX8', 'WNT2', 'RASGRP3', 'SLITRK6', 'LY86-AS1', 'HDAC7', 'C20ORF173', 'KRTAP10-6', 'APBA1', 'DEFB134', 'SMC4', 'PODXL2', 'TRIM17', 'ACOXL', 'TTC14', 'FCRL2', 'DUSP22', 'SLC25A31', 'TXNIP', 'GALNTL6', 'ROS1', 'MYH6', 'SYTL4', 'SNORD12B', 'VPS37B', 'NDUFAF6', 'ARRB2', 'GABARAP', 'POU2F2', 'KIF21A', 'IMPDH2', 'XKR6', 'CCDC88B', 'OR10A6', 'STX7', 'TAF1L', 'ENOSF1', 'PC', 'SPATA20', 'UBA2', 'PAX5', 'CS', 'ZNF525', 'MYOF', 'APBB1', 'CUL4B', 'ADCY5', 'GGH', 'CHD1', 'GRIA1', 'NFKBID', 'GUCA1A', 'GOLGA6L6', 'LINC00926', 'SP140L', 'NKX2-5', 'TSSC4', 'RRNAD1', 'GTF2H2', 'OR7A5', 'XPOT', 'DLGAP4', 'POLG', 'SLC25A13', 'RNF216', 'TIMM13', 'STIM2', 'LRRC15', 'C14ORF39', 'PDCD4-AS1', 'HIST1H3E', 'PPP1R16A', 'DNMBP-AS1', 'MARCKSL1', 'PPP1R12C', 'KRTAP23-1', 'UGT1A1', 'ZNF419', 'TJP2', 'IL34', 'EVI2A', 'CCL3L3', 'AGO2', 'SHISA4', 'STS', 'MGRN1', 'EFNA4', 'PLEKHM1', 'MARCH2', 'OR51G1', 'FUT9', 'NDST2', 'TMEM98', 'ABHD5', 'PARP15', 'P2RX1', 'LMX1B', 'ING3', 'TEAD3', 'EHD4', 'C11ORF95', 'SEC61A1', 'MYC', 'HLA-DRB1', 'ADCY3', 'NAT8B', 'PSEN2', 'TMEM54', 'GJC1', 'NDUFA5', 'LOC100288778', 'NRAS', 'ZNF28', 'RIMBP2', 'FAM107B', 'GPR18', 'MOGS', 'TUBA1A', 'HAPLN4', 'ARX', 'CHRNA2', 'GPKOW', 'TTLL3', 'SCARA5', 'C1ORF123', 'ILK', 'GCNT7', 'PTPRR', 'DAD1', 'NPBWR2', 'INA', 'STAG2', 'ZNF281', 'PI4KA', 'FRAT2', 'GPR135', 'DKFZP434L187', 'SLC7A11', 'RBFOX3', 'REG3A', 'FNBP1', 'STXBP6', 'TIMM22', 'SNX14', 'HIST2H2BF', 'SLC38A7', 'PIK3C2A', 'CENPT', 'AFAP1L2', 'ABTB2', 'NOP9', 'C11ORF70', 'TMEM256', 'SORD', 'CAPN9', 'ASPDH', 'EPS8L3', 'ISYNA1', 'CELF3', 'CYP4F3', 'METTL21A', 'LYSMD4', 'OR6Y1', 'LMNB1', 'P2RX7', 'CCL26', 'CTXN2', 'PRDM16', 'MPPED2', 'AQP7P1', 'TMEM95', 'UGGT2', 'SNX12', 'KATNBL1', 'STX3', 'METTL12', 'AP2B1', 'ALDOB', 'GMPPA', 'GRIA4', 'C1ORF228', 'CYFIP1', 'MFGE8', 'EIF4ENIF1', 'SYMPK', 'FTSJ1', 'LRRC19', 'BGLAP', 'PPFIBP1', 'CCDC134', 'RAMP3', 'MTG1', 'GUCA1B', 'HEBP2', 'MPDZ', 'ZBTB20', 'C3ORF58', 'RPTN', 'VPS4A', 'TMCO1', 'SNX22', 'DPEP2', 'C7ORF43', 'APMAP', 'HLF', 'RUVBL2', 'HNRNPA2B1', 'RBP7', 'CASZ1', 'KRTAP2-1', 'GGA2', 'CCR1', 'ASB4', 'RCC2', 'AGPAT1', 'RBM15B', 'SQSTM1', 'LPO', 'HK1', 'FAM222A', 'ALDH2', 'NPNT', 'COG4', 'FRMD7', 'ULK4P2', 'CDC23', 'APOC2', 'PRG2', 'ZSCAN12', 'KLHL24', 'FLOT1', 'FAM180B', 'COA3', 'DNAJC30', 'LRRC58', 'PMF1', 'ZNF343', 'KLHL36', 'COQ2', 'HSPE1', 'SLC48A1', 'SLC22A23', 'PACS2', 'LPAR5', 'IFI30', 'SERTAD3', 'CPS1', 'SNORD15B', 'MGMT', 'LINC00161', 'ACY1', 'TPTE2P6', 'FLG2', 'SEC24B', 'MARC1', 'OR5AP2', 'ADIPOR1', 'ATF6B', 'PCDHA13', 'LIPE', 'MYH10', 'OR1J2', 'COL6A5', 'EXOSC7', 'ETFB', 'YARS2', 'TAOK3', 'EXOC3-AS1', 'ACTR1B', 'SUPT7L', 'MRPL43', 'ZNF513', 'UBE2Q1', 'PRKAB1', 'NAIF1', 'HERC3', 'PMEL', 'GPR180', 'DALRD3', 'LY86', 'STARD10', 'CYTH4', 'LOC115110', 'ELK4', 'SORT1', 'NINL', 'CEP170P1', 'KCNN4', 'AP1M2', 'NT5DC1', 'FOXL2NB', 'LINC00623', 'POLR3A', 'TICAM2', 'CECR5', 'SELM', 'MLH1', 'DPH5', 'C6ORF10', 'PART1', 'CYB561', 'DYNC1I1', 'OR5A1', 'SNORD116-20', 'ZDHHC8P1', 'ZNF493', 'WNT1', 'CCNT2', 'ANO1', 'RBM25', 'ZC4H2', 'ZNF879', 'SARDH', 'LINC00661', 'GPR149', 'PRAMEF10', 'ZNF296', 'ZCCHC24', 'MTHFSD', 'GPATCH3', 'ALG1L', 'TXLNB', 'USP9X', 'KPNA5', 'FAM195B', 'TBX4', 'OR10J1', 'SLC47A1', 'TLK1', 'ARHGDIA', 'RNF113A', 'DOCK1', 'XKRY2', 'ZNF737', 'WDR37', 'WDR81', 'TECTA', 'RWDD2B', 'GYS2', 'PPP1R32', 'GDF11', 'GRB14', 'U2AF1L4', 'VPS41', 'CAPN12', 'DENND6B', 'RFTN2', 'SNORD115-7', 'C6ORF47', 'CCDC126', 'TOMM70A', 'PDZK1IP1', 'PCDH19', 'CHST6', 'NAA15', 'HR', 'PDDC1', 'FAM216A', 'DCBLD1', 'NUTM2F', 'BDKRB1', 'AGGF1', 'ARSE', 'REEP1', 'FAM26E', 'LRIG3', 'BTG2', 'CCDC116', 'CEP170', 'C1GALT1', 'HSFY2', 'TMOD2', 'GSG1', 'HIF3A', 'SNRNP70', 'HIST2H2AC', 'FGF1', 'ETNPPL', 'IPCEF1', 'C17ORF62', 'DCAF16', 'LRRFIP1', 'SLC35F1', 'OR2V2', 'IFNGR2', 'OGG1', 'AFAP1L1', 'RBM39', 'CCNI2', 'OR5C1', 'ALKBH1', 'PNMA3', 'CEP126', 'PCDHGA5', 'NPTX2', 'PROP1', 'PCDHA11', 'GRIK1-AS1', 'IFNA17', 'RMDN3', 'CENPI', 'ZMAT5', 'PPP3CA', 'RRBP1', 'SGCB', 'ZBTB41', 'PYGL', 'MS4A12', 'LIME1', 'PKD1L2', 'GTF3C4', 'CTDP1', 'LINC00092', 'TSG101', 'FMO5', 'FCHO1', 'LOXL3', 'OLMALINC', 'CNNM2', 'PUF60', 'XK', 'IL2RA', 'ZMAT2', 'C16ORF92', 'POLR3B', 'PSAT1', 'CDKN1C', 'NUDT16P1', 'GAS5', 'AIDA', 'KRTAP19-4', 'LOC100132287', 'TBC1D2B', 'CD46', 'TMEM18', 'GHSR', 'RGS8', 'AGL', 'PEMT', 'PPCDC', 'PVRL3', 'KCNK10', 'HNRNPDL', 'APP', 'FBXO28', 'TMEM194A', 'CCDC58', 'TTC36', 'ZDHHC11', 'GRHL2', 'ZNF831', 'TMEM99', 'SQLE', 'GALE', 'SERP1', 'CBX2', 'RTN4', 'GUSB', 'ELMO2', 'USP8', 'SNORD11', 'HAUS2', 'PLA2G2F', 'INS', 'GRIK4', 'SYT12', 'KLRC4', 'SYCP1', 'MUC13', 'LAMB3', 'ZNF836', 'PXDC1', 'AP3M1', 'SSTR2', 'TRIM27', 'ARRDC4', 'GLRA3', 'SCUBE3', 'SLC25A32', 'XKRY', 'TMEM97', 'SNORD60', 'TK1', 'TEX35', 'KRI1', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 1.8909194811549452e-14 NRMSE: 3.0334795558754232e-15 MAPE: 1.7652766916165332e-11 Pearson Correlation: 0.2530366735792612 Spearman Correlation: 0.31773485513608435 Coefficient of Determination: -5.6367927461167335 RMSE: 2.9642239884967316 NRMSE: 0.5264116477529269 MAPE: 1067.0935663529094 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 2.0911714641328745, tolerance: 0.0674331510902594 positive)
Pearson Correlation: 0.9999107047939683 Spearman Correlation: 0.9997404774842324 Coefficient of Determination: 0.999812500732757 RMSE: 0.015344380938738683 NRMSE: 0.002461599573071097 MAPE: 8.443108295193891 Pearson Correlation: 0.23554001262724786 Spearman Correlation: 0.3062920690664326 Coefficient of Determination: -6.780703814444451 RMSE: 3.209529201770395 NRMSE: 0.5699749958746927 MAPE: 1047.8341097933571 Predictor: RandomForests Pearson Correlation: 0.7764708193154399 Spearman Correlation: 0.6756585497821992 Coefficient of Determination: 0.59771317066153 RMSE: 0.7107510196968031 NRMSE: 0.11402117906421802 MAPE: 156.05300008430845 Pearson Correlation: 0.6608150363804642 Spearman Correlation: 0.6756958780805409 Coefficient of Determination: 0.40023793620470927 RMSE: 0.8910896222337499 NRMSE: 0.15824713589659917 MAPE: 216.66072169184196 Protein: CDH2 x_train_column_count: 474 x_train columns: ['PWRN2', 'PHLDB3', 'ISCA1P1', 'SORL1', 'HMGXB3', 'B4GALT7', 'ZUFSP', 'IFITM5', 'CACFD1', 'WDFY3', 'TRRAP', 'IKZF2', 'PTPRA', 'LRRC16B', 'FRZB', 'HRK', 'DUOX1', 'CENPF', 'FAM175A', 'ARMCX6', 'SBF1', 'CD164', 'CAPS', 'ACAD9', 'SEC14L4', 'CRX', 'FOXP4', 'PIGB', 'GBA2', 'CST9', 'TRAF6', 'CXCL9', 'PAGE3', 'UTP20', 'TMEM9', 'MROH2B', 'SNORD115-3', 'HIST1H3A', 'OR5J2', 'ZAR1', 'RBPMS', 'PLD1', 'PHKA2', 'BAALC', 'EDN3', 'LAMA1', 'CADM1', 'RPF2', 'CSF1R', 'TM4SF5', 'HNRNPA3P1', 'OR13J1', 'IL5', 'LOC613037', 'FGFRL1', 'RBFOX2', 'ZC3H14', 'B3GALNT1', 'CLIP3', 'ANKRD23', 'SORCS1', 'SNORD35A', 'CASC3', 'AKR1C4', 'AKIRIN2', 'STEAP2', 'ZBTB44', 'ARPP19', 'DHRS9', 'CYSLTR2', 'UROC1', 'SARNP', 'ITPR3', 'CMTM3', 'PLA1A', 'FAM175B', 'C8G', 'PROKR2', 'ARHGAP17', 'C3ORF36', 'MYADM', 'FAM47A', 'PHAX', 'ANXA4', 'PDE2A', 'LINC01020', 'SGK223', 'FZD3', 'POFUT2', 'SNORD17', 'LINC00628', 'CLK2P1', 'NANP', 'BUB1', 'CASR', 'ZNF519', 'SLC23A3', 'ZDHHC11', 'GREB1', 'SLC6A20', 'SPATA2', 'HIST2H4A', 'PPP2R5B', 'DYNC2LI1', 'PLXNB2', 'HBD', 'CLDN23', 'ZBTB1', 'PPP6R2', 'UGT1A1', 'DCDC1', 'SP7', 'ARMC1', 'RNF220', 'C6ORF106', 'GMNN', 'OR2T10', 'CTR9', 'SYT9', 'MGC16275', 'CRYAA', 'CCL15', 'ELOVL7', 'RPL8', 'OXCT2', 'CRYZ', 'MFSD10', 'BEX4', 'OR10C1', 'NFE2L3P2', 'LOC728392', 'SV2A', 'PRDM6', 'IRX4', 'SLC2A6', 'ZNF444', 'GNRHR', 'MORC4', 'TUBB1', 'CREB1', 'C11ORF95', 'THEMIS2', 'LINC00882', 'DKFZP434L192', 'TUT1', 'ACSS2', 'TMEM256', 'MAGEB6', 'ZNF599', 'MYLK4', 'SYCE2', 'EOGT', 'LIF', 'SLC35G5', 'NDOR1', 'AKAP5', 'KIAA0930', 'SCUBE3', 'PRRC1', 'PCF11', 'HOXA11', 'LOC391322', 'GABARAPL1', 'CKLF', 'RNF138', 'SDK2', 'CYP2S1', 'C9ORF69', 'UCA1', 'GGT8P', 'CHPF2', 'THNSL2', 'FLRT3', 'RRAGB', 'IKZF5', 'KLHL5', 'C1ORF122', 'RPS7', 'XRCC2', 'GLUD2', 'KLLN', 'MOG', 'FAM150A', 'CCDC7', 'SNORD94', 'EFNA4', 'OR1E2', 'LYNX1', 'LINC00894', 'RFTN1', 'VWDE', 'FBXO2', 'TEX37', 'RNASE13', 'KPNA1', 'ZFYVE16', 'KLHL22', 'UCK1', 'ALDH7A1', 'ANO1', 'IRF4', 'ERCC6', 'MUCL1', 'PIM1', 'LETM2', 'ZNF93', 'MAN1C1', 'VPS37A', 'PRSS21', 'RNF166', 'FNTB', 'ABCA4', 'GDPD1', 'GMCL1P1', 'HIST1H2BN', 'AHCTF1', 'TSPYL4', 'RPLP0P2', 'ZNF837', 'RGS10', 'ITGAV', 'TMPRSS3', 'PAM', 'CENPN', 'THG1L', 'KCNQ2', 'COL3A1', 'WFDC6', 'ARMCX1', 'EHHADH', 'SLC25A45', 'CYP4F12', 'HBS1L', 'BANP', 'ATP13A5', 'ZNF71', 'CLEC19A', 'TTTY14', 'PHRF1', 'CUTC', 'FAM170B', 'HPVC1', 'SNORA11C', 'MMP2', 'NMU', 'ZNF576', 'SUSD6', 'IL22RA1', 'COL4A4', 'PHF1', 'DEFB1', 'TMEM105', 'SOHLH2', 'LOC100270804', 'FITM2', 'RPS6KC1', 'CSN1S1', 'FAM71F1', 'SNAR-C2', 'MYO18B', 'MYT1L', 'NINJ1', 'MESP2', 'TMEM254-AS1', 'ST6GAL1', 'FAM57B', 'MRM1', 'UBAP2', 'NEURL3', 'C12ORF50', 'PRR22', 'CAST', 'CXCL10', 'PREX1', 'LRRC8A', 'DIO1', 'DDB1', 'IL5RA', 'TRPM6', 'TSPAN14', 'SNORD96A', 'EP300', 'SNORD4A', 'GNGT1', 'NDUFAF7', 'GPRC5B', 'OR13C9', 'DNASE1L2', 'CHSY3', 'KRBOX4', 'SAMD9L', 'CAPN2', 'RYR1', 'LAMA4', 'MGC15885', 'GLYAT', 'OCIAD2', 'TRDN', 'GPR4', 'CCDC113', 'CYP26C1', 'HAPLN4', 'TTLL12', 'ZBTB40', 'B3GNT7', 'APOA4', 'DDX27', 'AGPAT6', 'TRMT10A', 'SMC3', 'BCAP31', 'MAGEC1', 'KIAA1217', 'UXT-AS1', 'LRRC61', 'PPM1G', 'RAD54L2', 'LIPE', 'DUSP11', 'PPP1R26', 'ARPC5L', 'MPP6', 'IGSF11', 'TRIM58', 'RAF1', 'SUSD3', 'TPH2', 'BMX', 'HAUS3', 'ABCB10', 'ABHD8', 'SNORD27', 'CGNL1', 'C1QL4', 'HOXB2', 'DNASE1', 'TBX4', 'TRIM50', 'DPP3', 'SLC6A15', 'ARHGAP4', 'PTBP1', 'POTED', 'MAP3K9', 'HSF1', 'EMC1', 'TSPO2', 'OR5B3', 'NUDCD3', 'RRM2', 'PDSS2', 'WFDC11', 'TUBB7P', 'C10ORF32', 'RPL32P3', 'TUBGCP5', 'PRY2', 'TMEM133', 'EXOC6B', 'SARDH', 'ACTA1', 'LOC285627', 'VWA2', 'RPE', 'HEATR6', 'ZFP36L2', 'DUSP23', 'ELMO2', 'DTHD1', 'PEX5L', 'IRX2', 'STMN3', 'ECT2L', 'MSL1', 'UHRF2', 'RPL14', 'SLC17A4', 'EPHX1', 'CRISPLD1', 'SLURP1', 'LSM2', 'HDAC11', 'CACNB2', 'CRMP1', 'KIF20B', 'UBE4A', 'POU2AF1', 'GALNT11', 'SPRED2', 'SARS2', 'PANK3', 'RGPD8', 'PNN', 'STARD7', 'SF3B2', 'ENTHD2', 'CLEC4M', 'NSFL1C', 'ZBTB25', 'ACAD10', 'DHRS12', 'HM13', 'LAMB2P1', 'MOV10L1', 'TMEM167A', 'ADCY6', 'PACSIN1', 'DIRC1', 'PAQR3', 'PTPRC', 'WNT5B', 'KCTD9', 'PNMAL1', 'CYP4A11', 'SEC1P', 'ZNF606', 'KCNA10', 'LGMN', 'CA13', 'BRD7', 'WTIP', 'TTTY15', 'GOPC', 'NOTO', 'LOC392196', 'HBZ', 'NEDD8', 'SCARB1', 'CTDNEP1', 'PHF10', 'HDHD3', 'ANKRD20A9P', 'TIMM17B', 'DDAH2', 'SPAG5', 'TMPPE', 'CCNI', 'GLYR1', 'OR4D6', 'ADGB', 'RAD23A', 'FBXO5', 'PSMB7', 'FGF2', 'ADAM7', 'ADRBK1', 'TRUB1', 'ZMYM2', 'PKIG', 'PPP1R12B', 'HEXDC', 'ABHD2', 'RAMP2', 'HLA-DMA', 'OR8K1', 'SART1', 'ERH', 'KRT6A', 'MFSD6L', 'KIAA1467', 'EDNRA', 'DOCK4', 'STAMBP', 'C4BPA', 'STRC', 'PIWIL2', 'RHOJ', 'WRB', 'TNRC6C', 'DHX33', 'LMO3', 'GIMAP5', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.9207714465869554 Spearman Correlation: 0.9015928010977599 Coefficient of Determination: 0.8478200568498344 RMSE: 0.14359605349421525 NRMSE: 0.052031325999788124 MAPE: 420.2438091074753 Pearson Correlation: 0.02020141596798837 Spearman Correlation: 0.1343186030631158 Coefficient of Determination: -6287.249172773283 RMSE: 30.694886154471227 NRMSE: 16.17077825193277 MAPE: 16266.462899787206 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 9.0901846987265, tolerance: 0.007276153902921154 positive)
Pearson Correlation: 0.8813586466605156 Spearman Correlation: 0.8605918066747045 Coefficient of Determination: 0.7763239609669658 RMSE: 0.17408988048677218 NRMSE: 0.06308061471366483 MAPE: 496.79035015148554 Pearson Correlation: 0.024095231499928746 Spearman Correlation: 0.12023217247097846 Coefficient of Determination: -19.703406250489547 RMSE: 1.7612542651266823 NRMSE: 0.9278696139580134 MAPE: 1260.6129333703734 Predictor: RandomForests Pearson Correlation: 0.5654928355522434 Spearman Correlation: 0.47828199807547306 Coefficient of Determination: 0.1756797527068491 RMSE: 0.33420410429237063 NRMSE: 0.12109721874497088 MAPE: 608.5187691368783 Pearson Correlation: 0.20539804153126018 Spearman Correlation: 0.3161447663642572 Coefficient of Determination: 0.03627329461698481 RMSE: 0.3799951928728724 NRMSE: 0.20019028478633233 MAPE: 139.25857806051872 Protein: CDH3 x_train_column_count: 75 x_train columns: ['GPR88', 'FUT9', 'NDUFB2-AS1', 'KLHL9', 'PSMA7', 'SERPINA3', 'RBM4', 'ENPP6', 'ETV6', 'CSK', 'ANKRD17', 'GALNT12', 'UBR4', 'COL13A1', 'ARHGAP30', 'CRP', 'ZNF425', 'RPS27A', 'TISP43', 'HOXB2', 'RAPGEF5', 'MNAT1', 'DHRS4-AS1', 'SLC25A21', 'SFXN3', 'SLC5A12', 'FAM95B1', 'EPHA2', 'AGAP3', 'CCDC36', 'HKDC1', 'HIST2H3C', 'XKR8', 'C12ORF50', 'SERP1', 'STARD13', 'CCSER1', 'OCEL1', 'TSPAN6', 'KIAA0319', 'FAM92B', 'RPL37', 'TOP3A', 'PIAS2', 'KRTAP10-2', 'BRAF', 'LEAP2', 'SAMSN1', 'COL6A6', 'ANP32B', 'PPP3R1', 'SNORD15A', 'ZNF510', 'THEM4', 'VTRNA1-3', 'CPA6', 'SNORD115-3', 'MND1', 'MAN1A2', 'SNORD19B', 'EGFL7', 'DDX21', 'FOXA1', 'MRPL30', 'SPATA31D1', 'SERTM1', 'UOX', 'HIST1H2BJ', 'CALB1', 'TCIRG1', 'COL8A1', 'LOC401010', 'C10ORF35', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.5764310997303123 Spearman Correlation: 0.5670355247126628 Coefficient of Determination: 0.3322728127362973 RMSE: 0.1697266538828243 NRMSE: 0.12773599894848786 MAPE: 520.5562333044662 Pearson Correlation: 0.30323551714909663 Spearman Correlation: 0.3425080479953176 Coefficient of Determination: -0.1693668772254442 RMSE: 0.2140333870127149 NRMSE: 0.17611568091229732 MAPE: 1253.5066776292547 Predictor: ElasticNet Pearson Correlation: 0.5712648081545941 Spearman Correlation: 0.5561632047196062 Coefficient of Determination: 0.3263286211680282 RMSE: 0.17048044404699786 NRMSE: 0.12830330017911679 MAPE: 530.115733611415 Pearson Correlation: 0.30043970200619574 Spearman Correlation: 0.33928884986830554 Coefficient of Determination: -0.15991508079345818 RMSE: 0.21316663401138836 NRMSE: 0.17540248005545 MAPE: 1254.5719919879555 Predictor: RandomForests Pearson Correlation: 0.5695576307907372 Spearman Correlation: 0.5646613469327584 Coefficient of Determination: 0.28911204214867015 RMSE: 0.17512618959410967 NRMSE: 0.13179968059282898 MAPE: 244.61923417198372 Pearson Correlation: 0.27438999667472264 Spearman Correlation: 0.3592381231099405 Coefficient of Determination: -0.06601456755650204 RMSE: 0.20435614421718598 NRMSE: 0.16815283816110096 MAPE: 1426.6219762027106 Protein: PTEN x_train_column_count: 886 x_train columns: ['MRPL19', 'ZNF696', 'AOX2P', 'ADGRG4', 'CDR2', 'FAM78A', 'FAM200A', 'KIN', 'BAP1', 'RC3H1', 'SPAG8', 'HDAC10', 'MICAL1', 'OR2F2', 'RPS4X', 'PDZK1', 'FGF3', 'KCNAB1', 'G0S2', 'ST3GAL2', 'FBXO7', 'GOLGA2P10', 'SNHG8', 'KRTAP21-2', 'ENDOG', 'HEMGN', 'UGT1A4', 'KCNMB3', 'IFNA21', 'BRD1', 'RFPL2', 'GGNBP2', 'WDR90', 'SNORD110', 'CDH23', 'DOCK11', 'ATP13A1', 'AFM', 'AGRN', 'SERAC1', 'PAX9', 'ZNF57', 'KRT74', 'KCNS1', 'PAIP2B', 'FUK', 'UBE2J1', 'ACSF2', 'CHMP4B', 'OR5R1', 'RTL1', 'FAM45A', 'C10ORF76', 'ZIC1', 'SNAI3', 'CAMKMT', 'MAG', 'ZNF467', 'HECTD3', 'MAT2A', 'SWT1', 'PIDD1', 'GUCY1B3', 'TREM2', 'NACAD', 'PTGER4P2-CDK2AP2P2', 'HAUS8', 'ZC3H10', 'SLC9C2', 'NR2E1', 'PLSCR2', 'CLVS1', 'UBB', 'SNAR-A3', 'CREBBP', 'SRP68', 'ADGRA2', 'CD109', 'FAM155B', 'CUL7', 'ATAD3A', 'MGMT', 'MAGEB10', 'HPCA', 'ALS2CR12', 'SAR1B', 'CRYBA1', 'ZNF692', 'ENOX2', 'ABCC3', 'TCEAL4', 'TMEM260', 'LRRD1', 'NHSL2', 'KLHL17', 'SLC17A9', 'LIN9', 'ABCF1', 'PAX4', 'ACE', 'GSPT2', 'SPDYE7P', 'SLC41A1', 'SCAND1', 'SNX11', 'SNORA19', 'GEMIN7', 'MRPL48', 'DMTN', 'MYO1G', 'FOXB2', 'GRXCR1', 'OR5AP2', 'TGM6', 'BAG3', 'TRIML2', 'FLJ23867', 'ZC4H2', 'PLGLB2', 'HERC4', 'RAB3B', 'R3HDM2', 'CECR5-AS1', 'DRD2', 'DNAJB3', 'LINC00158', 'SYNPO2L', 'COBL', 'BCL11B', 'CHD4', 'NEDD4L', 'RRN3P3', 'PDE4D', 'SLC51A', 'MALSU1', 'DHX16', 'LIG4', 'KRTAP5-4', 'KIAA0355', 'EIF1B', 'TBC1D17', 'SALL2', 'MRGPRG', 'LOC90768', 'PUS7', 'TFAP2E', 'PADI3', 'ZNF71', 'KRT15', 'FBLL1', 'OR2M3', 'VAMP3', 'TTTY5', 'IGIP', 'DAND5', 'RAB3A', 'ZNF625', 'CCDC91', 'ZNF766', 'RHPN1', 'ZBTB44', 'MROH9', 'GRIP2', 'KRT33A', 'ANPEP', 'NRSN1', 'TNS2', 'USP34', 'PSG1', 'FKBP9P1', 'ATP11C', 'LOC388955', 'KANSL1', 'DDX11', 'FAM89A', 'SNORA77', 'BTN3A2', 'KCNMB4', 'ODC1', 'PEX26', 'MSMP', 'KATNA1', 'SUPT5H', 'OGFOD3', 'HIGD2B', 'INIP', 'ARPC5L', 'BET1L', 'GABRG3', 'STX5', 'OR4N3P', 'MPP6', 'CDC25C', 'KRTAP23-1', 'SNORD114-22', 'PPFIBP1', 'CEP295', 'OR51A4', 'SNORA59B', 'FAM124B', 'SHARPIN', 'DUPD1', 'CNFN', 'SGK494', 'SNORD20', 'STAM2', 'MRPS11', 'PCSK4', 'PECR', 'FUCA2', 'SIGLECL1', 'C17ORF89', 'UTP15', 'STRADA', 'ANKRD7', 'TTTY2', 'BIRC5', 'MUC2', 'TRAP1', 'DNM2', 'CD14', 'ZFYVE26', 'PLCXD3', 'LRRTM1', 'MST1R', 'HSD17B6', 'TERT', 'NFIA', 'ARMCX6', 'GABRA6', 'C9ORF16', 'SPANXN1', 'OR8D1', 'FBXO34', 'PZP', 'TIAF1', 'IRX3', 'C4ORF36', 'ZNF843', 'NUMB', 'FDPSP2', 'PFN3', 'TSPAN1', 'RAB4A', 'EIF1AX', 'NFKBIE', 'GNAL', 'TRIM72', 'POU2AF1', 'NOMO1', 'PKD1L1', 'ORC3', 'FGF9', 'PGRMC1', 'PTPN11', 'LVRN', 'C1QB', 'CBFA2T2', 'ERVFRD-1', 'POGZ', 'DOK5', 'XPO5', 'GNA13', 'ATP6AP1', 'IQCF3', 'JAK3', 'MT1DP', 'RAB8A', 'BCAR3', 'ALG11', 'ABCC12', 'BLOC1S4', 'CDC20', 'SLC35D2', 'ARMC2', 'OPA1', 'PLEKHJ1', 'ELMOD3', 'SNORD115-38', 'KCTD9', 'ZNF470', 'RNF166', 'GMNC', 'UNC119B', 'TIFA', 'MUC20', 'TMED8', 'HMGB3', 'TMEM169', 'LSM6', 'FFAR3', 'KRT37', 'ANKRD12', 'HSDL2', 'C2CD5', 'DESI2', 'KLK12', 'SOD1', 'PARVA', 'NDC80', 'SGPP1', 'GNPDA2', 'YBEY', 'GSDMA', 'CTSL3P', 'CLDN10', 'ZDHHC5', 'OR6K6', 'PNLDC1', 'WRNIP1', 'RCN3', 'SPATC1', 'RPL31', 'KCND1', 'CASP7', 'COL9A1', 'FABP12', 'CD84', 'METTL9', 'A1BG-AS1', 'SRPX', 'FBXO6', 'PROSER1', 'ATM', 'MC4R', 'CDCP2', 'ETV1', 'IL16', 'PDCL', 'PLEKHG4B', 'STYXL1', 'TMEM184C', 'FAM131B', 'ARSB', 'BST2', 'PNMAL2', 'RIMS2', 'LCA5L', 'SNORD22', 'C1ORF159', 'EME1', 'LZTS3', 'XPOT', 'OSBPL9', 'CTNNB1', 'APOL5', 'ACTN1', 'PPP2R5D', 'SNORD114-25', 'MUC16', 'SNORD50A', 'VTI1B', 'PRRT2', 'ZBTB22', 'LMNB1', 'FOXJ3', 'FKBP4', 'CALML3', 'MMP1', 'CLPP', 'KIAA0930', 'GGA1', 'TBC1D15', 'KIF1B', 'ADGRA1', 'SNORA30', 'EHD3', 'SERTAD1', 'ALPI', 'CHCHD4', 'TOMM7', 'DDB1', 'RNF40', 'PSMG1', 'SNORA47', 'SEC24C', 'ALDH1B1', 'NSUN4', 'SGPL1', 'CPNE7', 'PLA2G1B', 'LOC100240735', 'C5AR2', 'GPR176', 'C1ORF229', 'GARNL3', 'SPOP', 'LRRC16A', 'IL31RA', 'RTBDN', 'CXCL14', 'MDC1', 'ADGRL2', 'FEZ1', 'CAMKK1', 'NDUFS4', 'PHLDA3', 'LY6D', 'GLS2', 'SCN11A', 'CTNNA1', 'RGS2', 'MAP1A', 'RAPGEF3', 'CFHR2', 'LRRC4', 'ATP10B', 'RPS19', 'SLC25A37', 'LCMT2', 'CLDN14', 'FEM1B', 'SMC4', 'CSDC2', 'YIPF4', 'SLPI', 'ZNF833P', 'DIRC1', 'TP53I11', 'C5ORF58', 'PRSS1', 'BOD1L1', 'SF3B4', 'C2CD4D', 'LOC646471', 'CDS2', 'MRPS16', 'CCDC176', 'FAM160A1', 'IMPAD1', 'GNAI2', 'DHRS7B', 'PIGC', 'NCOA2', 'DTX3', 'ZFYVE28', 'NOL3', 'CDC42SE1', 'CA5BP1', 'SPG11', 'DEC1', 'CST7', 'KLHL38', 'TENM1', 'PLCB4', 'CACNA1G', 'MARCH2', 'ERC1', 'PRSS12', 'VPRBP', 'ANKMY2', 'POM121L9P', 'FAM196B', 'WNT8B', 'GOLPH3', 'KIR2DS4', 'GTF3C6', 'ZKSCAN8', 'LAMTOR4', 'KIFC3', 'ADAMTS4', 'BHMT2', 'SNORD9', 'ZCCHC8', 'ABCB1', 'GCNT2', 'ADAM33', 'GNG5', 'SNORD43', 'IKBKB', 'HIST1H2BM', 'DCUN1D2', 'MESTIT1', 'VWA1', 'CRIP2', 'PPP1R1C', 'IGLL1', 'TIE1', 'TMA7', 'MTERF3', 'ISCA2', 'NUCB2', 'IL7R', 'PPP2R3C', 'GOLGA8CP', 'CTTN', 'CRTC3', 'ZFAND3', 'CXCL10', 'SHMT2', 'PARD6A', 'OSBPL7', 'PDCD5', 'NBPF3', 'CDKN2D', 'CWH43', 'KIF27', 'LONRF3', 'C9ORF3', 'SLC35G2', 'RPS27A', 'RMDN3', 'SCARNA10', 'VBP1', 'ARRB1', 'NAP1L6', 'RNF115', 'DDX25', 'GPR89A', 'SLC25A26', 'MAP3K6', 'CD82', 'SCARNA23', 'GRPEL2', 'RPL29P2', 'SMR3B', 'DHRSX', 'KRTAP5-2', 'RGS17', 'TSPAN9', 'AHNAK', 'EXOC5', 'DGAT2', 'OLFML2B', 'COG4', 'ANK3', 'RSPO4', 'REM1', 'COX6B2', 'LAG3', 'KDELR2', 'NIPBL', 'PNRC2', 'NUMBL', 'GOT1L1', 'PLIN4', 'EMID1', 'ADAL', 'SPPL2A', 'TMBIM1', 'RAB1A', 'CCDC101', 'GLT6D1', 'HSP90AA1', 'INHBA', 'PCNAP1', 'GSPT1', 'PSAT1', 'NUP210', 'PMS2P1', 'CTXN1', 'DHFRL1', 'CACNA1F', 'N6AMT1', 'PVRL1', 'ARPC1A', 'ADGRG5', 'NGFR', 'SSBP1', 'ZBED1', 'C5ORF51', 'FAM212A', 'FZD6', 'ZNF208', 'PHLDA2', 'LIMK2', 'ALX1', 'RNASE4', 'ARHGAP24', 'C2ORF71', 'FBXO46', 'G6PC2', 'ASMTL-AS1', 'DPY19L2P4', 'DEFB116', 'STAG3L1', 'CCDC154', 'C14ORF169', 'BRICD5', 'OR52A1', 'SNORD116-15', 'UNC5A', 'VHLL', 'PANX2', 'ANGPT2', 'CORO2B', 'SPRR2G', 'LRP5', 'ZNF567', 'C9ORF139', 'DIRC2', 'GTF2IRD1', 'ELN', 'FCGR1A', 'TMEM100', 'HRK', 'PRSS48', 'CR2', 'PRSS8', 'S100PBP', 'DAPL1', 'CSTB', 'NANOS3', 'PALM', 'TEP1', 'MEX3B', 'MLST8', 'BDH2', 'MTX1', 'CD36', 'TINAG', 'PQLC2', 'MAOB', 'MAGEE1', 'ACTRT1', 'RGL4', 'LRRK1', 'PCDH20', 'SNORA41', 'KIAA0232', 'INO80B', 'ZBTB46', 'CIDECP', 'AMER1', 'SNORD116-25', 'HORMAD1', 'ZNF69', 'THEMIS2', 'PRSS37', 'C3ORF30', 'CHPT1', 'ZADH2', 'NME1-NME2', 'CLEC18C', 'CCDC103', 'SMIM5', 'OR6W1P', 'CLEC2B', 'TELO2', 'IRF6', 'HIST2H3D', 'RNF139', 'ENAH', 'C11ORF94', 'FSCN2', 'NAA35', 'MRAP', 'SHISA9', 'FKBP1B', 'CCL19', 'ARL15', 'LYPLAL1', 'EIF3IP1', 'HIST1H1T', 'SLC25A11', 'ACLY', 'AK9', 'CIZ1', 'SYN3', 'SH3D21', 'RPAP2', 'HHEX', 'LRRC31', 'PHF2', 'ZNF131', 'OR52E2', 'FANCG', 'SCARNA20', 'LINC00887', 'ABLIM3', 'INTS6', 'ADAMTS10', 'S100G', 'FAM49A', 'MUS81', 'TNIK', 'ROR2', 'WNK2', 'TM6SF2', 'SAT1', 'LCE2D', 'SLC35A1', 'SPATS2', 'RFX4', 'PRAMEF9', 'C16ORF90', 'BAZ1B', 'CXORF57', 'ZNF75A', 'CSH1', 'TRAF3IP1', 'UBA7', 'RPL23AP32', 'MSANTD2', 'CMTM2', 'POU3F3', 'SREK1IP1', 'CYP4F35P', 'GFOD2', 'PGS1', 'FAM205A', 'CYP4F2', 'SCOC', 'ACOT11', 'ACOX1', 'MSN', 'TLL2', 'EQTN', 'CHEK1', 'MARVELD3', 'KRTAP27-1', 'PCGF1', 'HJURP', 'HNF4A', 'CCDC134', 'TUBAL3', 'CDK8', 'PPM1K', 'THRSP', 'TMEM187', 'SNORA14B', 'NUP62CL', 'SNORA64', 'ZFP41', 'B4GALNT1', 'SLC10A2', 'CCDC183', 'NT5C1B', 'FKTN', 'ASPN', 'CCL22', 'BOP1', 'MYF6', 'MRPS25', 'NF2', 'YLPM1', 'OLFM1', 'CFAP58', 'APOC3', 'PXDNL', 'CAMTA1', 'TPX2', 'RPAP1', 'EMC2', 'DCLRE1C', 'TRNT1', 'TM7SF3', 'ASPHD2', 'C20ORF194', 'IFIT5', 'PRORSD1P', 'ZC3H12C', 'RAD54L', 'KCNU1', 'SAMD13', 'UBR5', 'CMKLR1', 'PNLIPRP2', 'PDGFA', 'FAM218A', 'ZNF385A', 'ATXN1', 'LRPAP1', 'CDC26', 'HBB', 'ATP11A', 'TLX3', 'CST13P', 'ACTL9', 'MAF', 'VSX1', 'APOBEC3D', 'SNORD115-35', 'GABARAPL3', 'EFCAB10', 'ZSCAN12P1', 'CSAG3', 'SEBOX', 'OR1C1', 'CNTNAP4', 'LINC00636', 'C3ORF38', 'C14ORF79', 'CYP1A1', 'AKR1C8P', 'TNRC18', 'LINC01124', 'SIGLEC14', 'ECD', 'ASCL4', 'C22ORF31', 'MICB', 'BZW1', 'TSSK2', 'NUP160', 'HSBP1L1', 'EHMT1-IT1', 'C11ORF45', 'KLHL1', 'CDK3', 'TRMT1', 'RPS7', 'OXNAD1', 'MARCH10', 'MUM1L1', 'CTU1', 'RTKN2', 'ZNF268', 'CANT1', 'LINC00669', 'PBOV1', 'ARPC3', 'NPY4R', 'S100P', 'GALNT16', 'TIAM1', 'NFATC2', 'IMPG1', 'ATP5L2', 'TMEM92', 'C1ORF115', 'ARMC1', 'CSN1S1', 'SLC25A51', 'CLNS1A', 'DPCD', 'SRSF10', 'PLSCR3', 'GPX8', 'TMEM248', 'DEFB129', 'SLC39A4', 'GREB1L', 'ALPK2', 'CD320', 'ACACB', 'RUNX2', 'EXOC7', 'RCSD1', 'SLFN5', 'WIZ', 'FABP2', 'DNAJB5', 'PPP5C', 'PLD4', 'TUBB1', 'RSAD2', 'GPATCH2L', 'ALOX15B', 'WDR55', 'AKAP1', 'LINC00341', 'TTTY8', 'ATF1', 'SLC35F4', 'NDUFA10', 'DCAF4L2', 'RSPO2', 'SNORD88B', 'SMAD2', 'NHLRC4', 'LINC00662', 'TRMT61A', 'SHANK1', 'RUFY3', 'CETN4P', 'C4ORF45', 'BARX1', 'OPTC', 'LTA4H', 'CACNG2', 'TAZ', 'UBE3C', 'LRRTM3', 'VWCE', 'DNASE2B', 'EED', 'MAP2', 'TMC3', 'SLC28A1', 'FGF14', 'PPAT', 'CD99', 'SNORD115-7', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 1.1960782659791673e-14 NRMSE: 1.8701872660138648e-15 MAPE: 5.2261225913071414e-11 Pearson Correlation: 0.10674884190095107 Spearman Correlation: 0.027811920788215788 Coefficient of Determination: -28.332891135793513 RMSE: 2.770981188804047 NRMSE: 0.9293604738409066 MAPE: 1959.2468373798397 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 1.211223982751145, tolerance: 0.020892714789331884 positive)
Pearson Correlation: 0.9997923900349241 Spearman Correlation: 0.9995429490002996 Coefficient of Determination: 0.9995528469166278 RMSE: 0.013189806061844332 NRMSE: 0.0020623572921342087 MAPE: 15.791670169888672 Pearson Correlation: 0.01772808598799403 Spearman Correlation: 0.016115500926738857 Coefficient of Determination: -8.704730428842872 RMSE: 1.5938515917384568 NRMSE: 0.5345625139986775 MAPE: 3810.7803111420894 Predictor: RandomForests Pearson Correlation: 0.6111885329893056 Spearman Correlation: 0.5606253815315249 Coefficient of Determination: 0.3183307496692148 RMSE: 0.5149880443337312 NRMSE: 0.0805235000130922 MAPE: 262.4106182500367 Pearson Correlation: 0.29234774424405385 Spearman Correlation: 0.30345856923562853 Coefficient of Determination: 0.06738339672303129 RMSE: 0.4940918766808048 NRMSE: 0.16571366939925034 MAPE: 613.8097928860229 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['RAB30', 'LXN', 'ZNF596', 'SLC38A8', 'YPEL4', 'MT1A', 'ADAM12', 'SPATA5', 'GPR89A', 'C16ORF93', 'GJD3', 'PCDHGB4', 'SLC2A9', 'ZNF761', 'HSD17B1', 'SMIM19', 'TTLL2', 'ATP6V1G2', 'TRIM26', 'AGO2', 'CPNE2', 'SNORD50B', 'GYPA', 'SLC35F2', 'ASIC5', 'NDUFS5', 'CCDC54', 'AAMDC', 'MYCBP2', 'KRT6A', 'COX5B', 'BNIP3L', 'MTMR9LP', 'SNORA71B', 'RBM7', 'FOXL1', 'HEXIM2', 'LSM11', 'INHBA', 'CCNA1', 'GPC5', 'ZNRF2', 'TSSK2', 'OTOA', 'FGF23', 'FGF6', 'KRTAP5-8', 'SHFM1', 'SNORA61', 'MTUS1', 'TONSL', 'DENR', 'VPS25', 'DDX41', 'TAF9B', 'FAM92A1', 'HVCN1', 'GYPB', 'OR6C68', 'LRRC40', 'CHST1', 'LOC90246', 'PLN', 'ZFP90', 'GLE1', 'PITHD1', 'HEY2', 'ZNF454', 'RHBDF1', 'ME1', 'BTD', 'TTTY17A', 'SYNM', 'RAB39A', 'SECISBP2L', 'TSNAX', 'NDUFAB1', 'ABCA5', 'AWAT1', 'UPF3A', 'MORN4', 'TIMM17A', 'KIAA0556', 'TMEM138', 'PRDM13', 'HOXA13', 'FAM224B', 'CACNG2', 'TSIX', 'OLFM3', 'L1TD1', 'GSTT2', 'CCR4', 'NFKBIB', 'CCDC101', 'SMARCD3', 'CCNH', 'LSG1', 'HIST1H1T', 'HMP19', 'DMP1', 'GJA4', 'GGA1', 'TUBD1', 'ARID5A', 'SNRPE', 'KRT71', 'ZNF280D', 'RIBC1', 'PSD', 'RAB40B', 'RTTN', 'ATAD1', 'CACNA1D', 'LCE3B', 'LOC285740', 'SCN9A', 'LAMA3', 'SLC16A10', 'KMO', 'LYRM7', 'IFI30', 'ZNF324B', 'HIPK4', 'ABCC12', 'WDR81', 'ATP10D', 'AIG1', 'OBP2B', 'LRRC8E', 'CCKBR', 'DLG1', 'C16ORF86', 'KLF13', 'LINC01512', 'OR52B2', 'PAX9', 'CA11', 'DYSF', 'ATXN1L', 'CCDC186', 'MYLK4', 'MDC1', 'CCDC64', 'RPUSD1', 'GK2', 'DYRK4', 'MTX1', 'CATSPER2P1', 'ADGRG5', 'ING4', 'TIGD3', 'SPDYE7P', 'TSR2', 'PAGE1', 'ASRGL1', 'OTUD7A', 'ABI3BP', 'MMACHC', 'AP5M1', 'CUL3', 'CLDN7', 'IGFL1', 'NAPB', 'HAPLN2', 'TRIM72', 'PCDHB17P', 'PDE4DIP', 'ZNRD1', 'DDX17', 'PSMD3', 'LOC285627', 'TK2', 'COMMD2', 'GPRIN3', 'TSC22D2', 'B3GNT8', 'PMP2', 'DMBX1', 'KAAG1', 'RGS7BP', 'COA1', 'COX5A', 'RFX4', 'FBXW7', 'ACCS', 'MTIF3', 'GFOD2', 'FZD5', 'PRRC2C', 'SENP3', 'CLIP2', 'KCNC1', 'FERMT2', 'PCDHB8', 'BTK', 'KDM5D', 'SETD9', 'TIMM9', 'LCMT2', 'FTH1', 'CDK1', 'FAM183A', 'RARS2', 'CHSY1', 'OSGIN1', 'TELO2', 'UNG', 'VSTM5', 'TBC1D19', 'ARPC4', 'LOC100129550', 'NR1I3', 'GAGE8', 'DBP', 'ANKRD39', 'TMA16', 'ARMT1', 'BPIFA4P', 'KLHL24', 'KIAA1024', 'WBP2NL', 'CLPB', 'PDLIM1', 'PLEKHH1', 'SEPT10', 'AP3S2', 'PSMD13', 'LDHAL6A', 'BCL2L10', 'SSX2IP', 'PNPO', 'RAB11FIP3', 'TEC', 'ST6GALNAC1', 'N4BP2L2', 'VCAN', 'TCOF1', 'TMIGD1', 'ZNF607', 'RIC3', 'GSKIP', 'RNF139', 'LINC00654', 'TYROBP', 'CYSLTR1', 'APP', 'KIAA0930', 'CEP250', 'R3HCC1L', 'SLC27A2', 'BAHCC1', 'IPO8', 'FGF11', 'AP3B1', 'GHRL', 'OR5K4', 'GRIN2D', 'PFN4', 'MYCNOS', 'PLAGL1', 'TECPR2', 'FAM19A3', 'FDXR', 'ZBTB44', 'ZNF853', 'RPL31P11', 'INTS8', 'PNN', 'FAM83F', 'NUDT19', 'ZNF75A', 'RLTPR', 'COL22A1', 'RTN4RL2', 'EPHB3', 'CHD4', 'RND3', 'B4GALT4', 'KLF8', 'WDTC1', 'TRMT10A', 'MAP3K11', 'LY6G6D', 'TNNT2', 'WDR55', 'KIAA0100', 'HTRA3', 'WSB2', 'TCEAL8', 'TMEM108', 'GYLTL1B', 'MVK', 'CLDN22', 'GOT2', 'ZNF623', 'KLHL31', 'TNFAIP3', 'ITGAL', 'PRRG4', 'ZC3H12B', 'PRELP', 'LINC00628', 'AFAP1', 'SELPLG', 'SKIDA1', 'BSPRY', 'MST1P2', 'DKK2', 'E2F5', 'SCN2A', 'DGKG', 'STUB1', 'HIST2H3C', 'N4BP2L1', 'DOPEY1', 'TGM3', 'OCIAD2', 'GLT8D1', 'CXCR2', 'RBM26', 'FKBP15', 'FOXL2NB', 'OR12D3', 'ADAMTSL1', 'LAPTM4B', 'HIST1H4K', 'SSX4', 'STAP2', 'CCDC25', 'SUSD4', 'RAB6C', 'PPARGC1A', 'SLC13A4', 'RPL3L', 'PARP8', 'SECTM1', 'CLINT1', 'DNAJC22', 'ETS1', 'GDF3', 'KMT2B', 'SCARNA12', 'IPPK', 'TMEM104', 'VTI1A', 'CRADD', 'LINS', 'TM9SF3', 'CPXM2', 'AARD', 'LY6G5B', 'TAB3', 'TXNIP', 'KIAA1875', 'JAM2', 'RAB9B', 'TLR9', 'FAM65A', 'ZNF799', 'TMEM140', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.8261499825032838 Spearman Correlation: 0.7948377488198488 Coefficient of Determination: 0.682523793590176 RMSE: 0.1100555832876393 NRMSE: 0.07090068177654328 MAPE: 174.05999575385042 Pearson Correlation: 0.20621612681196558 Spearman Correlation: 0.2514096185737977 Coefficient of Determination: -2.710293140800212 RMSE: 0.37212059506916106 NRMSE: 0.2518872527256341 MAPE: 570.8875116298867 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.03179354354525632, tolerance: 0.0020487419647026942 positive)
Pearson Correlation: 0.8050499457059572 Spearman Correlation: 0.7698944869245687 Coefficient of Determination: 0.6476627125268145 RMSE: 0.11594066633964888 NRMSE: 0.0746920060168458 MAPE: 180.17802165727716 Pearson Correlation: 0.2558023641104625 Spearman Correlation: 0.24084479562969469 Coefficient of Determination: -1.3845998847447318 RMSE: 0.2983234235679941 NRMSE: 0.2019341809670108 MAPE: 475.4916037882637 Predictor: RandomForests Pearson Correlation: 0.604968919920704 Spearman Correlation: 0.529517104425934 Coefficient of Determination: 0.19027618923957035 RMSE: 0.1757619830660767 NRMSE: 0.11323046098635962 MAPE: 133.1518511829688 Pearson Correlation: 0.2511184473934857 Spearman Correlation: 0.2319285923324554 Coefficient of Determination: 0.0375933228278974 RMSE: 0.1895216849225438 NRMSE: 0.12828662852750827 MAPE: 131.43174276558133 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['ARF6', 'STAT3', 'MLST8', 'UBA5', 'GIMAP6', 'USP36', 'FTO', 'DHRS4-AS1', 'PHF19', 'TIPRL', 'HIST1H4H', 'TNFRSF8', 'PCDHB8', 'C16ORF13', 'PCYT1B', 'MYH8', 'NCL', 'TSPAN4', 'TPSAB1', 'PABPN1', 'NTN4', 'OR5K4', 'NRTN', 'LRTOMT', 'SLC6A4', 'CFAP57', 'ZNF763', 'ELSPBP1', 'GDF2', 'LXN', 'CBR4', 'CSF1', 'MIR100HG', 'TDP1', 'GOLGA6L9', 'SVOPL', 'SPRTN', 'TMEM219', 'SEPT12', 'G6PC3', 'ANKRD34B', 'SERGEF', 'ZNF622', 'RPL23AP64', 'EBF2', 'ENO3', 'FBLN2', 'LINGO3', 'USP43', 'DLGAP1', 'CCDC6', 'CLK2P1', 'MBNL3', 'UBE2QL1', 'CTTNBP2NL', 'AHCYL1', 'SPATA24', 'GDF9', 'GATA6', 'MCM4', 'TTI2', 'CASP1', 'ILF2', 'GMPS', 'PLEKHB1', 'ATG4D', 'RGS22', 'PHKB', 'ACKR2', 'KCNK12', 'RRN3', 'ARMC12', 'UBE4A', 'WRNIP1', 'HLA-DQA2', 'SPAG7', 'ATP1A3', 'CYP3A43', 'TNS1', 'ZNF592', 'ZNF587', 'GCLC', 'C20ORF27', 'HRASLS', 'TMEM87B', 'PGM5-AS1', 'MBOAT4', 'KRTAP3-2', 'TGM1', 'MDN1', 'LINC00032', 'SMARCAD1', 'TTTY6', 'SUCLG1', 'ZBTB21', 'TEX37', 'CSAG1', 'FAM110B', 'ANG', 'FEN1', 'MRC2', 'HMSD', 'CAMK1', 'LYPD5', 'CTDSPL2', 'VWCE', 'RBM24', 'RETN', 'SNORD114-25', 'HOXB6', 'DRAXIN', 'EGR2', 'MESP2', 'ZNF287', 'SCD5', 'ASPA', 'PDZRN4', 'NRARP', 'CRYBB1', 'ARMCX1', 'MARK1', 'GOLGA8B', 'NTSR1', 'PTGES3', 'APOA1BP', 'PPM1H', 'RBMS1', 'BAG2', 'ACMSD', 'POLH', 'PANK3', 'FICD', 'RHCE', 'NAT1', 'FIGF', 'FLG2', 'LOC200726', 'SNORA28', 'CROCC', 'RBPMS', 'ZFP92', 'ELAC2', 'BCAS4', 'RNASEH2C', 'PPM1E', 'OR8H2', 'NOL11', 'CERCAM', 'ZBTB40', 'TMEM160', 'PRSS3P2', 'CCDC127', 'HBBP1', 'RAD18', 'ZNF137P', 'EXOC2', 'PSMG1', 'WASH3P', 'PLIN5', 'CSNK1G3', 'BUB1', 'ARRB1', 'C7ORF13', 'ALS2CR12', 'DYNLRB1', 'DNASE1L3', 'B4GALT1', 'UGT2A3', 'AGFG2', 'ERRFI1', 'SNORD116-24', 'TAAR5', 'ASB7', 'PRDM1', 'RSF1', 'ZFYVE9', 'IWS1', 'MSMB', 'MTMR11', 'TERT', 'TRIM16', 'SP140', 'SLC16A6', 'EZR', 'HAVCR2', 'ADAMTS9', 'PRR22', 'STK11', 'ARHGAP39', 'KRT20', 'ZNF48', 'IGF1', 'TAGAP', 'VENTX', 'CPSF7', 'ATRN', 'SERPINA5', 'PLCD1', 'CDRT15P1', 'LOC256880', 'CCDC43', 'SNORA21', 'BACH2', 'IFNAR2', 'SNX9', 'MRPL45', 'ZBED4', 'RANGRF', 'HMGCL', 'CHCHD3', 'OR5AN1', 'ATP6V1C2', 'MCM3AP', 'PASD1', 'KLF8', 'LRRC1', 'GPR176', 'PLK3', 'CFAP221', 'TBX2', 'NT5DC1', 'ITGBL1', 'ECH1', 'SLC25A43', 'SPRR3', 'NFKBID', 'OR10A5', 'AOC1', 'SEC24B', 'PABPC1P2', 'ETV5', 'CCDC112', 'EDC4', 'TRPV2', 'SH3PXD2A', 'LSS', 'NAA10', 'SSH1', 'LOC284441', 'OR3A4P', 'OTUD3', 'LRRC34', 'DNAJC16', 'MUC5B', 'PPL', 'SLC25A44', 'PCBP3', 'BEND3P3', 'NR1I3', 'H2AFX', 'CLIC6', 'SPATA32', 'IL17RA', 'GPRC6A', 'HECW1', 'TAS2R40', 'NGDN', 'OR2H2', 'GP6', 'C1ORF158', 'GDF7', 'PSG8', 'MAP1S', 'IL1RL1', 'C16ORF90', 'OSBPL10', 'RAC2', 'VCX3A', 'PRO0628', 'EREG', 'LRRC41', 'GTF2H2', 'CXCL11', 'CCT6P1', 'FGFR4', 'LTBR', 'BUD13', 'DLX5', 'BPNT1', 'OSBPL1A', 'EPN2', 'DLX3', 'RFPL4B', 'ZCCHC12', 'ZMYM2', 'KTN1-AS1', 'CUL3', 'DHX36', 'CCND1', 'HINT1', 'MYL12B', 'HTR5A', 'CHRM5', 'CLN3', 'FOCAD', 'COQ10A', 'CTSE', 'HSPA2', 'EXOC5', 'RHBDL3', 'LINC00593', 'BRF1', 'TMEM200C', 'NRIP1', 'PAN3', 'SLC52A3', 'FSHR', 'B3GALNT1', 'ZW10', 'COPS3', 'PEX11G', 'SUGT1', 'ANXA2P3', 'WRAP53', 'TCL1B', 'HIST1H3J', 'HDGFRP2', 'FRRS1L', 'MNAT1', 'PDP1', 'SNORA69', 'GPAT2', 'TMPRSS4', 'ZNF18', 'C1ORF21', 'TYK2', 'DIRAS1', 'EEF2', 'CABLES1', 'CFAP70', 'POU4F1', 'PLAC9', 'CCRN4L', 'RNF24', 'ZNF205-AS1', 'OR5W2', 'COX4I2', 'NAP1L1', 'C17ORF53', 'OR4N4', 'ZNF25', 'ADAM22', 'KCTD16', 'MEGF11', 'SNORD49A', 'RPL13P5', 'UXS1', 'NSFL1C', 'GFI1B', 'LETM2', 'LINC00923', 'C4ORF45', 'PREX1', 'EVA1A', 'PLB1', 'TEPP', 'FAM222B', 'ESYT2', 'ZNF782', 'CHRNA5', 'SSTR4', 'ARPC3', 'FABP5', 'GIMAP8', 'SPOPL', 'CLTB', 'C9', 'RNF222', 'FAM134A', 'PRMT6', 'SCN8A', 'SRMS', 'ZEB1', 'LOC81691', 'KHDRBS2', 'DNAJB8', 'AKAP3', 'RAMP2', 'CEACAM16', 'ZNF385D', 'BDH1', 'ERLEC1', 'CT83', 'GAPDH', 'SUGP1', 'KRTAP5-8', 'HCG27', 'OMD', 'PTPN1', 'TBC1D8B', 'ZNF235', 'CLDN1', 'TRHDE', 'KRTAP11-1', 'FEZF2', 'TUBA4B', 'CKMT1A', 'PUM2', 'SNORD43', 'TAS2R10', 'HNRNPL', 'SDHA', 'SMIM10L2A', 'BTG1', 'LAMTOR3', 'MAP3K7CL', 'ZDHHC6', 'HIST1H4F', 'GSTA2', 'NEUROG3', 'FLJ44635', 'NDC1', 'LIPE', 'PDK1', 'ABHD14A', 'IRX6', 'UBXN11', 'ZNF134', 'RASL10A', 'PLA2G2F', 'KDM3B', 'CENPI', 'FAM185A', 'PKHD1', 'APH1B', 'UBAP2', 'DHX58', 'SNORA24', 'ZNF594', 'AHSA2', 'B3GALT5-AS1', 'HOXB7', 'VRK3', 'WNT7B', 'GSKIP', 'ZNF780A', 'KCTD4', 'HBG2', 'GAP43', 'ZNF418', 'BPHL', 'C11ORF73', 'TMEM26', 'SON', 'TJP1', 'HYAL1', 'IPO5', 'EML3', 'ANAPC1', 'WBP2NL', 'PLEKHO1', 'LIMD2', 'OR4K5', 'GNAI1', 'STAM2', 'ZSWIM6', 'FABP7', 'NLE1', 'SERPINA10', 'PCAT18', 'DMRT1', 'SLC2A1', 'WT1-AS', 'RTL1', 'CLEC3B', 'AKAP1', 'FAM169A', 'SPINK4', 'USP32P2', 'FBXO47', 'TMEM175', 'AP5S1', 'NKX2-4', 'ADCK5', 'TROVE2', 'CACNA1F', 'DUSP5', 'ZNF428', 'XKRY2', 'HMHB1', 'ANKRD32', 'FANCI', 'NTN5', 'FBXO9', 'DIRC1', 'TBC1D10B', 'EARS2', 'INSL4', 'GPR142', 'LMBR1', 'FERD3L', 'TAF9', 'TFE3', 'TYW5', 'MRPS31', 'FASTKD1', 'CCL27', 'PROX1', 'MYT1', 'B3GNT7', 'ZDHHC22', 'PIK3R1', 'ZNF562', 'CACNA1I', 'CAPG', 'CEP97', 'ACADS', 'CAMK2A', 'PIKFYVE', 'TCEAL6', 'PCDHA9', 'LOC285627', 'S1PR2', 'PSPN', 'GJB1', 'POLE4', 'GPR61', 'FLYWCH1', 'HPYR1', 'WAPAL', 'AGO3', 'PRSS48', 'LIN37', 'EMB', 'SGCZ', 'TRIM68', 'BCR', 'RER1', 'HIST1H3E', 'SPEF2', 'NYNRIN', 'LRSAM1', 'FAM168A', 'JPH4', 'LSM8', 'TMEM8B', 'IGFBP5', 'RHOD', 'DDX27', 'NDUFB5', 'HLA-DOA', 'LOC100287704', 'OR6Y1', 'CLIP4', 'POLDIP3', 'DCAF16', 'ZUFSP', 'TNP1', 'SURF6', 'SRCIN1', 'PCNXL3', 'ATF1', 'CCSER2', 'CALML5', 'OSGEPL1', 'COL23A1', 'SNORD116-4', 'EPHB2', 'DHRSX', 'TTC37', 'PFN1', 'RASGRF1', 'EGFL6', 'FOXE1', 'SCRIB', 'HP', 'SYP', 'KCNB1', 'ERP29', 'EDNRB', 'ZNF488', 'TEFM', 'CDKN2D', 'RBM34', 'IL2RA', 'TEKT4P2', 'SDHC', 'ITGB3BP', 'DEFB134', 'KRT25', 'GIMAP1', 'LINC01119', 'TBC1D23', 'PRKG1', 'SNX29P2', 'CTRC', 'RIN3', 'LINC00628', 'LAMC1', 'LRIG1', 'PPAPDC3', 'LOC401127', 'CT55', 'SPEF1', 'DPYSL4', 'C6ORF25', 'NXPE1', 'TCTEX1D1', 'CRIP2', 'RBMS3', 'SLC7A13', 'TRPV3', 'SLC35B1', 'SNORD65', 'EVC', 'B4GALNT3', 'TPR', 'TSPAN17', 'PIWIL3', 'ANKRD9', 'SNORD35A', 'MYH2', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 1.932371622580958e-13 NRMSE: 4.3684223410895393e-14 MAPE: 1.1619816470114231e-10 Pearson Correlation: -0.13704809348774852 Spearman Correlation: -0.05571163788898645 Coefficient of Determination: -53.06534436195689 RMSE: 4.95168987658598 NRMSE: 1.3377160894170035 MAPE: 2972.9202574277347 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 5.644684269597235, tolerance: 0.023629428078437084 positive)
Pearson Correlation: 0.9906265668042625 Spearman Correlation: 0.9888289854335721 Coefficient of Determination: 0.9811128238843237 RMSE: 0.09116391703765765 NRMSE: 0.020609001251872417 MAPE: 104.99487962772986 Pearson Correlation: -0.007886129684638463 Spearman Correlation: 0.13788410886742758 Coefficient of Determination: -22.265142886223238 RMSE: 3.2482302940217793 NRMSE: 0.8775206110929812 MAPE: 2687.8817211906958 Predictor: RandomForests Pearson Correlation: 0.6566003737717229 Spearman Correlation: 0.6063808017188466 Coefficient of Determination: 0.4164805664310778 RMSE: 0.506718924726262 NRMSE: 0.11455158239544748 MAPE: 158.5755169142142 Pearson Correlation: 0.704237296289468 Spearman Correlation: 0.6085211198907424 Coefficient of Determination: 0.4523835039155054 RMSE: 0.4983474167407958 NRMSE: 0.13463027251480328 MAPE: 119.54778302354919 Protein: TP53 x_train_column_count: 1002 x_train columns: ['PAXIP1', 'LOC644936', 'SH3BGR', 'KRTAP11-1', 'LGSN', 'SMAD9', 'XKR5', 'ATP6AP2', 'POLR2H', 'ZAP70', 'AGAP6', 'SHISA6', 'ZNF554', 'SPDYE1', 'PDHA2', 'LOC407835', 'SPOCK1', 'EFCAB8', 'ARSE', 'C15ORF56', 'GALR3', 'FAM43B', 'PPIB', 'ZPLD1', 'TMEM143', 'CHST8', 'DNALI1', 'SPIC', 'ESRRB', 'CDKN2C', 'KHDRBS2', 'GGH', 'SPAG17', 'NFAT5', 'C21ORF2', 'HP', 'KRTDAP', 'SMAD2', 'TRIM55', 'NOL6', 'SLC4A11', 'BST1', 'NAA11', 'FAM71A', 'PTRF', 'ATP4A', 'PLCD1', 'DENND2C', 'ABHD15', 'MGC15885', 'DNAJB1', 'EDN3', 'CMKLR1', 'AMMECR1L', 'MAN2C1', 'BAP1', 'GTF2H4', 'PRSS53', 'TIA1', 'CYB5D1', 'IGF2', 'SPICE1', 'ZC3H7A', 'SCNN1D', 'HTATIP2', 'PARN', 'ZFAND1', 'ANKRD28', 'LOC646813', 'RTN4', 'MPZL1', 'LOC284578', 'RNF135', 'IL5', 'LINC00472', 'GAMT', 'HS6ST3', 'SEC22C', 'RUFY2', 'SNAR-E', 'LHFPL2', 'SNORD45C', 'MLH3', 'GMFG', 'HSPA1A', 'ADD2', 'TMEM200B', 'UCP2', 'ID2', 'LOC440173', 'BCL2A1', 'PLOD3', 'HIGD2A', 'DPT', 'NPFFR2', 'KANSL2', 'CCDC107', 'MLLT3', 'SLC22A2', 'EIF3B', 'FZD3', 'PHOSPHO2', 'ZFYVE27', 'GATAD2B', 'PIP5K1C', 'MTG2', 'HAPLN2', 'NPTX1', 'FUNDC2P2', 'TOLLIP', 'S100A5', 'ZYG11A', 'ZNF619', 'ZNF546', 'C10ORF90', 'OR2T33', 'PKD1L1', 'TACC1', 'S100A7L2', 'HEATR1', 'TTC39A', 'SNORD65', 'RTP3', 'G6PC2', 'VAT1', 'FAM184A', 'FRY', 'UGGT2', 'FGF21', 'ALPK3', 'ZNF808', 'CS', 'SPP1', 'SNORA79', 'PID1', 'CLCN7', 'C17ORF70', 'CHRM4', 'KLHL40', 'FAHD2CP', 'PLAC1', 'DDX31', 'PLEKHS1', 'C19ORF38', 'GPR151', 'PPP1R15B', 'DYNLT3', 'RASGRF2', 'FLT4', 'HSPA9', 'FAM178B', 'SRRM4', 'RPS15AP10', 'ADAM12', 'LY6H', 'SPIN2B', 'OR10A6', 'CD40', 'MPV17', 'CDKAL1', 'CWH43', 'H2AFZ', 'KIAA0907', 'ANXA11', 'MSL2', 'TEX29', 'ZNF718', 'CHCHD6', 'EEF1DP3', 'MAPK1', 'HMGXB3', 'KRTAP10-4', 'ARMC5', 'GTF2IRD1', 'SMC5', 'ZBTB26', 'GLUD1', 'GCSAML', 'IVL', 'PQLC2', 'ITPK1-AS1', 'CD7', 'SOX18', 'RLN1', 'FN3K', 'CKMT1A', 'SNORA70', 'TMOD4', 'TRO', 'BPIFB3', 'C12ORF49', 'C19ORF40', 'ACTL6B', 'GALNT10', 'FLVCR1', 'OR4K17', 'ALPPL2', 'TMEM50B', 'GPR176', 'HMGA1', 'GPR161', 'ATXN7L3', 'ZNF605', 'FMO4', 'WNT3A', 'EBNA1BP2', 'SRA1', 'WDYHV1', 'ANKRD26P1', 'XDH', 'FAM209A', 'GRK1', 'ISPD', 'HOXC6', 'CACNA1D', 'FAM111B', 'SPATA31A6', 'SLC35D2', 'NSMCE2', 'CORO6', 'THUMPD3-AS1', 'BAK1', 'RGS7BP', 'DHX35', 'DPY19L1', 'RS1', 'C11ORF42', 'PNRC2', 'NSRP1', 'RPS6', 'SPOP', 'RNF151', 'WNT8A', 'LMCD1', 'TRIM44', 'MORF4', 'KDSR', 'FOXC2', 'ASB2', 'AP3M1', 'OR2H2', 'GABARAP', 'CWC22', 'OLFM3', 'ZNF558', 'LIX1', 'KCNJ4', 'CEBPE', 'OR10G3', 'NETO1', 'BTG2', 'LIPM', 'IGFL4', 'TPTEP1', 'MAP1LC3B', 'EIF5A2', 'TERT', 'AKT3', 'OPRK1', 'CLDN7', 'MID2', 'ADGRF4', 'HIPK3', 'TM4SF20', 'OR5H15', 'ATAD5', 'RRS1', 'TBCE', 'RTEL1', 'COL9A2', 'TMEM216', 'TMPRSS3', 'APH1A', 'RASA2', 'SPSB2', 'TRIM75P', 'ITGAX', 'OGDHL', 'SECTM1', 'USP1', 'ASAP1', 'SNORD119', 'TTLL11', 'TM7SF3', 'CD72', 'SLC35F6', 'GPR135', 'SNORD115-39', 'LGALS3BP', 'CACYBP', 'OR1N2', 'ZNF844', 'ELAVL4', 'ZBTB43', 'SNORD29', 'PUSL1', 'WDR13', 'FAM78B', 'FBLIM1', 'BAHD1', 'TMEM182', 'APCDD1L', 'ITGB1BP1', 'SEPN1', 'LUC7L', 'TRIO', 'LINC01184', 'NEO1', 'MRPL40', 'TMEM8C', 'KMT2D', 'ZNF439', 'TBL1X', 'MON1B', 'SLC25A53', 'LINC00667', 'MCF2', 'XAGE3', 'CDKN2AIP', 'TEDDM1', 'DNAL4', 'ALDH9A1', 'RANBP9', 'AIG1', 'CAMTA2', 'SLC22A13', 'P3H4', 'OR10H1', 'TMEM41B', 'BARX2', 'TRPM1', 'WDHD1', 'DKK1', 'LOC284023', 'FZD8', 'TTR', 'RPA1', 'ACBD3', 'PDIA3P1', 'POU3F2', 'KCNH8', 'KLHL7', 'SUOX', 'CEL', 'SNAPC3', 'JAZF1', 'PLRG1', 'CYP4F3', 'ENDOD1', 'FBXO24', 'OR8U1', 'EXOSC4', 'CDKL1', 'SCARNA4', 'UBE2J2', 'FEZF2', 'SYT12', 'EBF4', 'NDUFAF5', 'ALKBH7', 'CDH17', 'OR2J3', 'FAM110C', 'LRRC59', 'SPTSSA', 'TSHB', 'CDK20', 'CABP4', 'SLC25A40', 'FBXO27', 'RGS7', 'ZNF233', 'GOPC', 'PRPF4', 'AKR1B15', 'AMPH', 'CTSL', 'SPDYE4', 'RFC3', 'SNORD78', 'MANSC1', 'LOC153910', 'NTN5', 'PIAS1', 'OR5K4', 'TMEM31', 'CBS', 'SND1-IT1', 'STON2', 'RPL30', 'FAM175A', 'SNORD37', 'DOLPP1', 'SDHAF2', 'NIPAL4', 'TMEM187', 'DLG2', 'VAX2', 'SLC52A1', 'SLC19A3', 'INCENP', 'CDH20', 'ERO1L', 'ZNF217', 'MAML2', 'SYNPO2L', 'ST8SIA4', 'SEC24A', 'TMEM38B', 'POP1', 'IRGQ', 'CNNM4', 'MMP13', 'NMT2', 'SPRR2G', 'CSRNP1', 'KPNA2', 'DDO', 'WFDC6', 'KIAA0513', 'C15ORF57', 'MALL', 'LINC00167', 'TRIM5', 'ZNF530', 'ABCA3', 'C1QTNF2', 'MUS81', 'OR2B3', 'PTCH2', 'SLC25A32', 'SPINK1', 'DNAH12', 'CDAN1', 'ALS2CR11', 'SALL1', 'ANKRD13A', 'AQP6', 'LRP10', 'ANAPC15', 'SIPA1', 'LAMC1', 'HNRNPU-AS1', 'SNORA34', 'MTMR6', 'MSMO1', 'EPHX4', 'MST1R', 'KIAA1210', 'MYLIP', 'SLX4', 'ZNF644', 'RNASEH2A', 'P4HA3', 'IL32', 'SNX1', 'C2CD4C', 'KAT6B', 'RHBDL2', 'MAFF', 'C9ORF117', 'STMN2', 'MRTO4', 'GYS2', 'NCK1', 'EBPL', 'LOC440461', 'SSR3', 'ARSF', 'DCAF6', 'HEXIM2', 'HES2', 'ELSPBP1', 'NDUFAF1', 'CD40LG', 'FAM210A', 'LARP6', 'TUBB', 'TMCO3', 'VWA8', 'PTPN4', 'ERC2', 'MIR99AHG', 'SMPDL3A', 'FAM160A2', 'EXOC3L2', 'CREG2', 'ANKFN1', 'ESCO2', 'FXYD5', 'RBM12', 'CDHR5', 'FAM106CP', 'HIST2H3C', 'STEAP2', 'GNPDA2', 'LLGL1', 'IL22RA1', 'DAPK2', 'NDUFB2-AS1', 'KIAA0754', 'SLC44A2', 'DUOX2', 'DMP1', 'PLN', 'PCDHGA3', 'SUPT3H', 'OR2T5', 'UPK3B', 'FUT10', 'PDIA6', 'LBX2', 'TTPA', 'DHX34', 'HACE1', 'ZNF503', 'NUTM2A-AS1', 'PELI1', 'OR4K15', 'IRF2', 'SLC22A3', 'CNGA2', 'SARAF', 'AARS', 'LEPROTL1', 'GLYATL3', 'CLN6', 'BCL9', 'FRZB', 'HOXA13', 'SYK', 'UQCRB', 'SPRR1B', 'VPS35', 'MSN', 'PDLIM5', 'TANGO6', 'C6ORF223', 'FCGR1A', 'ZNF140', 'LINC01566', 'NDST3', 'TMEM179', 'LOC100130093', 'BRDT', 'SPNS1', 'LOC151174', 'HIST1H4G', 'RNPS1', 'TAP2', 'NEMF', 'GCM1', 'SPAG5', 'YAP1', 'CMTM3', 'APOPT1', 'ZHX2', 'RASEF', 'PARPBP', 'CKAP2', 'GPT2', 'TRIP4', 'ATG7', 'AP2A1', 'MTHFR', 'TRIM35', 'PTPRZ1', 'USP44', 'PITX2', 'NUP107', 'NUDT18', 'ITFG2', 'FOXF2', 'ALDH3B2', 'C2CD2L', 'C17ORF102', 'BOLA2', 'NAPSA', 'KIAA1958', 'ADRA2A', 'PLEKHA7', 'CSN2', 'STAT5B', 'C1ORF186', 'NAA40', 'RAB24', 'OR1B1', 'LRRC47', 'QKI', 'ZNF768', 'POLR2D', 'RALBP1', 'ERLIN2', 'JADE1', 'CYGB', 'CAGE1', 'COL5A3', 'LGMN', 'KCNK7', 'SNORD36B', 'TRAPPC4', 'LINC01558', 'EVC', 'XRRA1', 'GTSF1L', 'PGA4', 'RBP2', 'GALR1', 'ST6GAL1', 'MRPS34', 'CCT6B', 'DPF2', 'NLE1', 'ARHGAP39', 'FECH', 'GTF3C3', 'FGF1', 'ITM2C', 'PNMAL1', 'TMEM30A', 'SENP8', 'ARHGEF15', 'CLDN20', 'KLF1', 'UQCR11', 'NPY1R', 'CACNA2D4', 'ZNF737', 'C16ORF70', 'EIF6', 'SELM', 'ARHGAP4', 'CHAC2', 'CCDC62', 'TANC2', 'NCOR1P1', 'CFAP47', 'LRRC75B', 'GFPT1', 'CABP5', 'CCL17', 'PCDHA13', 'HPSE', 'NDST2', 'RASSF3', 'PAPOLG', 'BEND7', 'HIST2H2BF', 'SSBP2', 'PDCL3', 'QSOX2', 'LOC400043', 'RBMY1J', 'AATK-AS1', 'GPR50', 'TMTC1', 'RBBP4', 'SDCBP', 'NXPE1', 'DMRTC1', 'LOC400927', 'GRIP1', 'PDGFC', 'ONECUT1', 'EXTL3', 'SNORD115-11', 'UBE2A', 'SOX10', 'OR10R2', 'BDP1', 'FDPS', 'ADCY5', 'TXNDC8', 'SHOC2', 'TIFA', 'COASY', 'TFEC', 'FBXO16', 'C1ORF106', 'ZNF568', 'TCEAL8', 'OVCA2', 'MSTO1', 'ICAM1', 'EPHA8', 'FANCA', 'SYT9', 'CAPN9', 'TSR3', 'MID1', 'UNC80', 'CMA1', 'MAGEE1', 'DNAH10', 'HIST1H3F', 'RNF141', 'CNOT1', 'GLIS3', 'FAM107B', 'TOP2A', 'MUT', 'LINC00284', 'MYEF2', 'MORN2', 'REXO4', 'OR8K1', 'TNRC6A', 'KRTAP5-9', 'H3F3B', 'PRCP', 'EME2', 'PPARD', 'ANKRD39', 'ARSA', 'LRRC17', 'SPAM1', 'PCMTD2', 'FRS2', 'LOC143666', 'GPATCH3', 'SNORD114-14', 'TXNRD1', 'ZNF131', 'PGRMC1', 'ZNF273', 'PRAMEF8', 'ZNRF2P1', 'DNAJC3', 'ZNF252P', 'LRRC28', 'ZNF674', 'SLC24A5', 'ZNF846', 'CERS5', 'WASF1', 'CLRN2', 'DUS4L', 'NTRK3', 'SNORD12', 'CLMN', 'ATP13A1', 'CACNG1', 'PLEK2', 'LINC00620', 'CPXCR1', 'FAM118A', 'PABPC4', 'CYB5A', 'ARL2', 'PIP4K2B', 'EDNRB', 'GPR157', 'OR4S1', 'ZNF823', 'S100P', 'FMR1-AS1', 'MSRB2', 'RHBDL3', 'APOH', 'CAMK4', 'SCARB2', 'C11ORF96', 'EIF2AK1', 'HRASLS', 'KDM2A', 'RECK', 'HOMER1', 'CNIH1', 'JRK', 'PPP5C', 'ZNF512B', 'HESX1', 'CCDC167', 'FAR2P1', 'LGALS13', 'ATP13A2', 'MTCH1', 'TMEM190', 'SAMD10', 'TMEM176A', 'TMEM39A', 'C6ORF1', 'PARG', 'ORC4', 'FRS3', 'FAM163B', 'HOGA1', 'WWC2-AS2', 'CYYR1', 'ADIRF', 'EMC7', 'CYP2C8', 'LOC644172', 'CATSPER1', 'SUPT20HL2', 'ETAA1', 'RPS19BP1', 'PMEL', 'TRAP1', 'TCAF2', 'PHF10', 'SORCS3', 'CMTM4', 'RNGTT', 'ID1', 'HNF1B', 'PPP1R9B', 'DNAJC30', 'CXCR2P1', 'ZNF526', 'DHX15', 'MS4A12', 'AMY2A', 'NUDT16P1', 'RNF187', 'MAP3K11', 'TMED9', 'SNORD52', 'ARHGAP29', 'LPAR1', 'RC3H2', 'MYOM1', 'OR51B5', 'WWP2', 'C2ORF73', 'SIPA1L3', 'CPSF4', 'RPL28', 'FDCSP', 'USP3', 'SPP2', 'FAM102A', 'FKBP9', 'PPAP2B', 'SP140L', 'EPC1', 'AP2M1', 'C11ORF53', 'HSPH1', 'FAM117A', 'DNAAF2', 'ITLN2', 'ARL5C', 'SNORD27', 'SPACA4', 'HAUS7', 'SNORA24', 'XKRX', 'POU2F1', 'CXORF56', 'TAB3', 'RFX7', 'UFD1L', 'TOR2A', 'FAM217B', 'ZNF221', 'MAS1L', 'LSMEM2', 'BRIX1', 'RPS27', 'SSTR4', 'PWP2', 'RAI2', 'GPR153', 'C11ORF1', 'AKIRIN2', 'ZNF518B', 'SNORD116-26', 'PAX8', 'TOP2B', 'ZNF773', 'FEM1C', 'TXN', 'C14ORF169', 'PALM2', 'HPR', 'PQLC3', 'KLF10', 'ALAS1', 'CSHL1', 'DKFZP779M0652', 'UCN3', 'LILRA2', 'PRKCSH', 'TP53RK', 'UPP2', 'EXOC5', 'SMIM1', 'RAP2A', 'OR13C8', 'FAM53B', 'EIF2B3', 'SUB1', 'SPATA33', 'PRKRA', 'FLJ41941', 'PWRN1', 'PCDHB19P', 'KRT75', 'PSG3', 'KDM5A', 'RNF168', 'FAM27L', 'E2F7', 'LOC100133050', 'WDR91', 'RCC1', 'DSCC1', 'OR52B4', 'PDLIM2', 'NEDD9', 'BTNL2', 'TRPV5', 'NKG7', 'DCK', 'CTHRC1', 'EIF3IP1', 'HOXA4', 'SAMD4A', 'POTEC', 'MGC16275', 'HPSE2', 'DEFB122', 'KATNAL2', 'KRTAP10-10', 'FOXB2', 'ISCA1P1', 'SUGT1', 'DHDDS', 'VAC14', 'MDFI', 'TAF1', 'RANBP6', 'SNORD63', 'CD93', 'RGS13', 'SLC35F4', 'SYT14', 'BGN', 'RSU1P2', 'ECE2', 'FGG', 'DACH2', 'CCDC57', 'ADA', 'GTSE1', 'MLF1', 'FBXL13', 'HACD3', 'SDHC', 'NOXO1', 'MAP3K10', 'MIOS', 'CHST2', 'SAMD4B', 'LGALS12', 'GXYLT2', 'TDRKH', 'HIST3H3', 'PRAMEF9', 'PRR7', 'GTF2B', 'TSKU', 'CLLU1OS', 'KLHL6', 'PATZ1', 'LINC00596', 'NR2F1-AS1', 'CTNNB1', 'ZNF707', 'HAGH', 'PLA2G2C', 'NOBOX', 'DDIT4', 'ABHD6', 'OR6C2', 'SP2', 'ICAM5', 'RABGEF1', 'HFE', 'NCAPD3', 'MVB12B', 'C5ORF60', 'WDR43', 'RAMP1', 'PRRT2', 'MBNL3', 'GATA6', 'OR6T1', 'MTM1', 'ARRDC2', 'NCKAP1', 'SHISA3', 'DUSP5P1', 'ARPP21', 'OXGR1', 'COX11', 'CLEC4D', 'STBD1', 'FAM183B', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.0021480661046902e-14 NRMSE: 2.68420534647031e-15 MAPE: 1.1462102299179783e-11 Pearson Correlation: -0.10291031303262264 Spearman Correlation: 0.13268949370793096 Coefficient of Determination: -35343.782064668485 RMSE: 76.96494674544509 NRMSE: 25.34659863179486 MAPE: 2191.301315971675 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.6143696232877575, tolerance: 0.011132998655991638 positive)
Pearson Correlation: 0.9998446500723581 Spearman Correlation: 0.9996407252054237 Coefficient of Determination: 0.9996638122990179 RMSE: 0.008348526808560967 NRMSE: 0.002236112711547065 MAPE: 10.616269543582426 Pearson Correlation: -0.10293033124295389 Spearman Correlation: 0.2386206223783046 Coefficient of Determination: -87099.8681955402 RMSE: 120.82075940381351 NRMSE: 39.78948111437955 MAPE: 3681.0838956698894 Predictor: RandomForests Pearson Correlation: 0.6672273247723026 Spearman Correlation: 0.5939099235089054 Coefficient of Determination: 0.3852372388992402 RMSE: 0.357003695506082 NRMSE: 0.09562172104086836 MAPE: 317.7290464104057 Pearson Correlation: 0.5853521082349048 Spearman Correlation: 0.4676616915422886 Coefficient of Determination: 0.3111386482320484 RMSE: 0.33977876142788144 NRMSE: 0.11189815953495189 MAPE: 1786.8190025876024 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['STAG3L2', 'KRTAP5-9', 'SNORD115-22', 'GPR39', 'DLK1', 'COBLL1', 'SLCO4C1', 'ELF2', 'HSD17B10', 'SAT1', 'HBA1', 'DDX50', 'RAD54L', 'FGF2', 'FCRL1', 'BLNK', 'STK31', 'SP7', 'NBEAL1', 'LCOR', 'RAP2C', 'MSL3', 'NDUFA13', 'FHOD1', 'LOC284441', 'SMIM24', 'CCDC71L', 'FOXO4', 'SNORD116-11', 'AMER2', 'TTC27', 'SYNE3', 'CCDC115', 'GSTA5', 'CFHR5', 'LRWD1', 'MRPL52', 'FXYD2', 'AKTIP', 'EEF1A1P9', 'TMEM132E', 'SSR2', 'POU3F2', 'MBTPS2', 'SNRNP27', 'ZNF473', 'SLC4A10', 'MED4', 'CLINT1', 'LRRC18', 'PPARD', 'CRAT', 'ZCCHC14', 'DNAJC22', 'PRH2', 'SMARCAL1', 'ME3', 'PSMC1', 'CELF2', 'FAM135B', 'EGFL7', 'MTIF3', 'FAM65C', 'GBGT1', 'OR9Q1', 'PSMB10', 'TNFRSF1A', 'NYAP1', 'SLC2A4RG', 'IL25', 'TRIM42', 'SRSF4', 'UQCRH', 'FCER1G', 'CYB5B', 'ADCY10P1', 'SS18', 'C17ORF58', 'C16ORF87', 'OR13H1', 'STX4', 'CCT8', 'FAM83A-AS1', 'DEFB131', 'OR14I1', 'PACS2', 'ST6GAL1', 'ANKRD54', 'GDAP2', 'IKZF4', 'CD248', 'SUPT3H', 'TUBA4B', 'SNORA27', 'MYEOV2', 'TTI2', 'REEP1', 'NT5C3A', 'COX6A1', 'C12ORF50', 'TMEM55A', 'ATXN3L', 'DCAF12L2', 'SLC45A2', 'ZNF267', 'SNRK', 'GJA8', 'FAM57A', 'USH1G', 'MAZ', 'TRIM24', 'FGD2', 'STAMBP', 'VAMP4', 'PDE8A', 'SLC22A9', 'DHFR', 'ITPK1-AS1', 'ALX1', 'PSME4', 'USP32', 'TMEM40', 'USP17L9P', 'MYOF', 'TUBG1', 'JAGN1', 'ROPN1', 'CCDC163P', 'TBL1Y', 'KLRF1', 'DENND6A', 'DIAPH2', 'EED', 'ZNF575', 'GCLC', 'GLA', 'LSMEM2', 'KIR2DL4', 'LINC00895', 'ISL2', 'NUDT21', 'CHST14', 'PPFIA3', 'VAMP7', 'IDH3A', 'C9', 'PDE6A', 'SNORD115-25', 'DQX1', 'HNRNPU', 'KAAG1', 'UBA6', 'FOXRED2', 'PNN', 'BCAM', 'KLHDC2', 'PLEK', 'PIP4K2B', 'KCND3', 'SCARNA17', 'MMADHC', 'MT1X', 'KRTAP10-8', 'DUSP23', 'ZNF557', 'LILRA2', 'FOXD4L6', 'AMIGO1', 'ADRB3', 'PARD6G-AS1', 'TNFSF10', 'PKD2L1', 'ETFDH', 'PEX26', 'CORO1C', 'OSTF1', 'MANF', 'PALB2', 'BCDIN3D', 'AASDH', 'MAP3K14-AS1', 'GLOD5', 'SARDH', 'RHEB', 'IRX6', 'ZFYVE26', 'G2E3', 'LACRT', 'SPOP', 'TMEM261', 'KCNC4', 'LINC00235', 'TOR2A', 'ZNF483', 'PAX8-AS1', 'GNB1L', 'ZG16B', 'ZNF320', 'ADGRF1', 'CD52', 'CCM2', 'KIAA0125', 'MED11', 'CNN2', 'CST2', 'POGZ', 'GOLGA8DP', 'C18ORF42', 'RELB', 'FAM173B', 'SMPD1', 'LYST', 'ABCA11P', 'RHOC', 'C11ORF42', 'AACS', 'TMED6', 'FAM71C', 'OR2T33', 'EFNA1', 'HOXB7', 'MASTL', 'TRIML2', 'LINC00667', 'SYNJ2', 'SCGB1D1', 'RER1', 'SNORA5C', 'UNC79', 'MTFR1', 'LINC00847', 'PPP1R2P9', 'SNRNP200', 'SFXN2', 'PMPCB', 'PRDX4', 'FMO5', 'CABP5', 'RAX', 'STX12', 'LGR5', 'TECPR1', 'TGM2', 'VRK3', 'TSPAN16', 'UGT1A1', 'CBX8', 'TSNAX', 'RBP5', 'NUP153', 'OR5M8', 'GBA', 'RNF7', 'FZD10', 'C21ORF2', 'FAM183A', 'CTGF', 'LOC728554', 'HOXB8', 'GPR143', 'ELOVL1', 'LOC100129534', 'LCN10', 'NAT9', 'COX8A', 'LGI1', 'NCBP2-AS2', 'FBXO10', 'ZNF439', 'FRMPD4', 'STX16', 'MIS12', 'C4ORF17', 'MRPS23', 'RPL26', 'TTLL12', 'BAHD1', 'OR2T1', 'ZNF418', 'SNORD115-41', 'AGR2', 'TAS2R9', 'MZB1', 'GAPDH', 'CCNE1', 'RSRC2', 'EIF2AK1', 'MDM1', 'PRPF38B', 'RFNG', 'SNORD114-15', 'GADD45G', 'SEPHS1P1', 'PLEKHB1', 'SCN1B', 'STPG2', 'TTC12', 'PLD2', 'TCEANC', 'RIBC2', 'TPRX1', 'ATP2B4', 'STOX1', 'ZNF19', 'ULBP2', 'FCAMR', 'SLC10A5', 'TEPP', 'TEX29', 'SETD3', 'ZIM3', 'WDR38', 'RAPGEF2', 'LOC100134368', 'ESPL1', 'WDR24', 'PBX1', 'AGPAT6', 'ANKRD36BP1', 'HCRTR2', 'SIRPB1', 'LINC00964', 'CTSG', 'RPL13AP17', 'LINC00520', 'FAM13A-AS1', 'ELOVL5', 'ATP6V1B1', 'BMS1P4', 'FAM134B', 'ABCC9', 'TMEM143', 'APOC4', 'PEMT', 'OR5AU1', 'TMEM134', 'ETS2', 'ZCCHC16', 'SNORD95', 'PQLC2L', 'CCND3', 'HRASLS2', 'ATCAY', 'TLR8', 'ATP1B1', 'LOC652276', 'MED29', 'SFR1', 'LMOD2', 'GALNT1', 'ZNF766', 'PTPDC1', 'SEC11A', 'LOC644172', 'ZNF846', 'NHLH2', 'CCHCR1', 'C8ORF82', 'CRHR1', 'BPNT1', 'GCNT3', 'RNF128', 'SERPINA10', 'ZNF154', 'NKAIN4', 'MICALCL', 'SNORD58C', 'PDXP', 'SIDT1', 'HK2', 'CELA3B', 'NR2E3', 'RPL34-AS1', 'OR51F1', 'KCNIP4', 'RPS26P11', 'RAVER2', 'ZNF716', 'CD163L1', 'AGAP6', 'CTNND2', 'RHBG', 'SEMA5A', 'FRS3', 'TPGS1', 'DIRC2', 'SPDYE7P', 'SERTAD3', 'DMXL1', 'HTR2B', 'MLNR', 'TGFBI', 'TBX6', 'CHAC2', 'CRNKL1', 'NBPF15', 'SLC13A5', 'UNKL', 'SUPV3L1', 'FAM35BP', 'ANKRD20A4', 'C18ORF8', 'LPAR4', 'OAS2', 'CHST4', 'ATE1', 'DEFB124', 'PAXIP1-AS2', 'BLOC1S2', 'PSMG2', 'DNASE1L1', 'PRDM9', 'ZNF296', 'LINC00473', 'PPAT', 'FITM2', 'TM4SF18', 'DGKB', 'SERPINF1', 'MAOA', 'TESC', 'C10ORF113', 'ADGRD1', 'DYNLRB2', 'MRPL39', 'METTL2B', 'MYADML', 'IAH1', 'NGFRAP1', 'PLEKHG6', 'NKAIN2', 'RSL1D1', 'C11ORF70', 'ZMYM5', 'ZNF48', 'NPY4R', 'EOMES', 'NUPR1', 'HOXA11-AS', 'PPL', 'PTTG1IP', 'ALDH1A2', 'CLIP4', 'SHKBP1', 'DOT1L', 'ATP5G2', 'PPP1R11', 'SLC45A4', 'KRTAP5-1', 'FATE1', 'CCDC65', 'SNORD77', 'TFAM', 'ARL2BP', 'TRIM6-TRIM34', 'CT45A6', 'ADHFE1', 'CCDC183-AS1', 'OR1S1', 'ADAMTS18', 'ANKRD23', 'PAQR3', 'ZMYM2', 'OXA1L', 'SLC25A19', 'CD300E', 'HAUS7', 'ISX', 'ZHX3', 'GUCY2C', 'PCDHB10', 'SNORD8', 'SGTB', 'OR13C5', 'HBD', 'NRM', 'ARID4B', 'ZNF791', 'TYRO3', 'SPR', 'SRY', 'SLC37A3', 'SSX2', 'LRRC46', 'FAM189A1', 'RHD', 'ZNF226', 'PRR26', 'DIS3', 'CYBB', 'FEZF1', 'BMP3', 'RECQL4', 'AATK', 'ZNF484', 'PFDN4', 'WFDC10A', 'CNOT7', 'GTF3C5', 'KCND2', 'IPW', 'F2RL1', 'MLLT4-AS1', 'ERGIC2', 'MMRN2', 'TRIOBP', 'IMP4', 'IL1RL1', 'CPSF4L', 'SLC2A8', 'IGHMBP2', 'C11ORF95', 'ASCL2', 'KCNC3', 'OOEP', 'MMP19', 'ANKRD53', 'JMJD7-PLA2G4B', 'IGIP', 'AKAP6', 'EFCAB10', 'UBAP1', 'RTN4', 'TMEM194B', 'SNORA29', 'OR4F15', 'USP3', 'DNAH1', 'SMIM12', 'FAM47A', 'GPR34', 'SNORA48', 'AMMECR1', 'PTPRZ1', 'SLC4A2', 'H3F3C', 'PPIAL4G', 'SEL1L3', 'ABLIM1', 'ANTXR1', 'GOLGA2P5', 'SERPINH1', 'DIP2A', 'MRPS35', 'PPY', 'MGEA5', 'PRPH2', 'FAM58BP', 'EIF3F', 'TMEM52', 'CDK5RAP1', 'IHH', 'KLF7', 'CWC27', 'SMN2', 'SCEL', 'CSF2RA', 'FBXO38', 'ABTB2', 'CLEC18A', 'LRPAP1', 'NOP16', 'GHSR', 'SIPA1L3', 'CRTAP', 'THBS4', 'TBL1X', 'VWC2', 'FAM83D', 'SCUBE1', 'KLF1', 'SNRNP25', 'CIZ1', 'PRPF8', 'PAPOLB', 'PAPL', 'METTL3', 'ADORA2A-AS1', 'FAM99B', 'C1ORF174', 'CABLES1', 'POM121C', 'ZBED4', 'GPM6B', 'CT45A2', 'SLC27A1', 'ZUFSP', 'RANBP1', 'KCNJ9', 'OR4P4', 'FKBP11', 'HSD11B1', 'CGGBP1', 'PPP2R3B', 'EPHX2', 'C5ORF51', 'DTX2P1-UPK3BP1-PMS2P11', 'TPRG1', 'COX8C', 'CEP112', 'ADAMTS14', 'SPTB', 'SHOX', 'FUNDC1', 'GRAMD3', 'FAM214B', 'PAX2', 'BRMS1L', 'TMEM241', 'SLC24A5', 'MGMT', 'LIMS1', 'ZDHHC8', 'PITX1', 'PTPRM', 'RASA4CP', 'NTRK3', 'POLR2J3', 'JMJD4', 'AMER3', 'FAM66E', 'SOCS7', 'RALGAPB', 'SOGA1', 'TMED5', 'ZNF638', 'HS3ST5', 'BOLA2', 'LRRC69', 'NAPG', 'IFIT1', 'SLC4A7', 'MT1DP', 'OTOP3', 'ZNF124', 'TTC3', 'TFIP11', 'SSC4D', 'SPRN', 'CLDN7', 'EIF4EBP2', 'FBXL15', 'PDIA2', 'ZNF827', 'CHMP5', 'NME8', 'APLF', 'CYP39A1', 'MKS1', 'ADAMTS9', 'PCDH10', 'SSR1', 'KBTBD8', 'ZNF385D', 'MED13', 'GHRLOS', 'CFAP57', 'TTLL2', 'DAB2', 'SLC25A20', 'PPBP', 'CFAP70', 'MEIS3P1', 'ASPHD1', 'SNORD97', 'WNT10B', 'LOC644145', 'AIRE', 'TTC22', 'ASCL1', 'RAB27B', 'NMNAT1', 'CYP46A1', 'ZNRD1', 'SNORD18A', 'NCKAP1', 'CES1P1', 'ZNF564', 'PVRL1', 'RBM48', 'NUDT15', 'NOXO1', 'SPICE1', 'NEMF', 'IGFBP6', 'GRWD1', 'BMI1', 'RPL12', 'LIG1', 'HOXC4', 'LOXL2', 'MRPL50', 'NEFH', 'SCN4A', 'DDX23', 'FOXD4L5', 'CDH26', 'CHD1L', 'DIRAS1', 'NR1D1', 'MIR1-1HG', 'FAXDC2', 'ADAM21P1', 'ACRC', 'MTMR11', 'PUM2', 'TANGO6', 'HELT', 'KIAA1919', 'DCTPP1', 'PRTFDC1', 'C6ORF52', 'P2RX6', 'TDG', 'HAR1A', 'WHSC1L1', 'GEMIN8P4', 'GLIPR1L2', 'KRTAP4-9', 'ZNF586', 'TRMT2A', 'TSGA13', 'MYOT', 'RPS19BP1', 'TM7SF3', 'CCDC159', 'STAG3L1', 'ABCB1', 'MARK2', 'KRTAP5-AS1', 'ITGB5', 'BAALC', 'SLC39A3', 'ZGLP1', 'SNORD115-45', 'PRKAA1', 'CD8B', 'EXOC8', 'CA1', 'SNAR-D', 'OR51B6', 'LYPD3', 'OTOA', 'MYPOP', 'ZNF283', 'RBM24', 'RGS7BP', 'FLG', 'MEX3B', 'STRA6', 'MRPL32', 'TMEM184C', 'SLC27A4', 'CAND2', 'PCDH19', 'FGD5', 'ANKRD50', 'TNRC6A', 'TBC1D31', 'C17ORF64', 'RUNDC1', 'SNORA14A', 'TRAF1', 'STH', 'WIPF1', 'B9D2', 'KRT1', 'FGFBP2', 'LINC01089', 'TSPY4', 'IFT81', 'ARHGAP21', 'IQCF2', 'DCTN3', 'ST7', 'OR10A5', 'ERN2', 'OR4C16', 'TMEM223', 'COX19', 'SPEF1', 'NTPCR', 'PAPOLA', 'ASPH', 'APOOL', 'NUSAP1', 'LINC00928', 'DUSP6', 'EDDM3A', 'CABP1', 'WDR11', 'CRCT1', 'APOBEC1', 'MALAT1', 'NDN', 'DOC2B', 'LRRC41', 'KRTAP19-7', 'ACAP3', 'SLC22A7', 'MYH1', 'DYX1C1', 'RRAGA', 'FAM153B', 'FAM57B', 'MTTP', 'TSLP', 'MAPK10', 'ITGAV', 'SUMO2', 'KCTD7', 'LOC285768', 'STARD8', 'PTGER2', 'HTRA3', 'KIAA1328', 'H2AFZ', 'SLC14A1', 'BSCL2', 'FYTTD1', 'KIAA1033', 'NEDD4', 'NME1', 'CFL1', 'SUN5', 'GSG1', 'SIGLEC11', 'LINC00652', 'LARGE', 'AHNAK2', 'OSBP', 'RUNDC3B', 'NF2', 'LSM6', 'VAX2', 'S100A16', 'ATP6V0E2', 'FCGR2A', 'MATR3', 'CHID1', 'OR51B2', 'AKR7A2', 'ITGA6', 'ARID2', 'TMEM176A', 'SNAR-F', 'ASIC2', 'SPACA3', 'PKIA', 'GPR32', 'HSPA6', 'SPON1', 'TEX15', 'HIST1H1C', 'STRIP2', 'TAL2', 'RGCC', 'UCHL1', 'ABI2', 'ZBED2', 'RPL28', 'CRYGD', 'C5AR1', 'MED1', 'ACTA1', 'CRB2', 'HCRT', 'TMEM51', 'OR6N1', 'GABRG3', 'INTS4P2', 'ATP1B4', 'ACTR1B', 'LOC100272217', 'CLEC17A', 'ZNF322P1', 'SUGT1P3', 'LPCAT2', 'KIAA0355', 'TGS1', 'FIP1L1', 'NUP205', 'MRPL44', 'OR51A4', 'TMEM190', 'GNG13', 'TSPAN12', 'TRIP11', 'VWA5B2', 'CDKL1', 'OR2A14', 'WTH3DI', 'ARMCX5', 'LARP1B', 'MOSPD2', 'HYALP1', 'FREM2', 'OXT', 'C15ORF39', 'BMPR1B', 'FSTL1', 'RBMX2', 'C15ORF56', 'HSD11B1L', 'CELSR2', 'LMNB1', 'LRR1', 'PRDM15', 'SPACA7', 'UMPS', 'GXYLT2', 'MYO3B', 'SMURF1', 'GATM', 'CGB1', 'FAM63A', 'ATP6V1A', 'HSD17B1', 'KIF4A', 'ZNF274', 'DEXI', 'TSPAN32', 'STAT3', 'FER1L5', 'NKD2', 'ZSWIM2', 'DNAJC4', 'GTF2IRD2B', 'GTF2H2C', 'C1ORF105', 'TRIP13', 'NUP98', 'SYT2', 'GRIN2C', 'PRKCI', 'MMD2', 'C11ORF88', 'HPVC1', 'CDX4', 'RPGRIP1', 'ST8SIA1', 'FCRLA', 'RBFA', 'VAT1', 'TBX18', 'KLHL22', 'C17ORF104', 'ZNF788', 'FAM21C', 'ADORA3', 'ARRB2', 'UBAP2', 'OLIG3', 'RSU1P2', 'TRIM64', 'RPIA', 'ITGA9', 'CANX', 'TAC1', 'SPRR1A', 'EPC2', 'GRIK1', 'ELMOD1', 'STT3B', 'GRAMD1B', 'LPCAT1', 'GYPA', 'KIAA0753', 'AMFR', 'RNY4', 'EEF1B2', 'COA1', 'CERK', 'NXF3', 'LINC00488', 'SLC16A6', 'DRAM2', 'MINA', 'FAM138D', 'SLX1B', 'SFTPD', 'FDX1', 'PSMG1', 'SLC22A4', 'PLA2G7', 'PDLIM3', 'IFT22', 'SYS1', 'TNFAIP6', 'KLRB1', 'FAM66A', 'RABEP2', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 1.2649812498419485e-14 NRMSE: 2.4881613883594584e-15 MAPE: 1.735858464248998e-11 Pearson Correlation: 0.13454920503204848 Spearman Correlation: 0.14026436445224857 Coefficient of Determination: -9.550848636487844 RMSE: 2.4898617403852654 NRMSE: 0.61966146695833 MAPE: 1518.1810713298785 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 1.2670186512337251, tolerance: 0.028224784501103505 positive)
Pearson Correlation: 0.9999072114570895 Spearman Correlation: 0.9998487539266699 Coefficient of Determination: 0.9997946824660229 RMSE: 0.01038822133346433 NRMSE: 0.0020433165486751243 MAPE: 4.909484134008446 Pearson Correlation: 0.1430020438325703 Spearman Correlation: 0.12028582577309531 Coefficient of Determination: -4.475632280582061 RMSE: 1.7936953119316497 NRMSE: 0.4464038505591324 MAPE: 968.8303838727757 Predictor: RandomForests Pearson Correlation: 0.6399455989306899 Spearman Correlation: 0.607744810232287 Coefficient of Determination: 0.270775494537136 RMSE: 0.6190971458264438 NRMSE: 0.1217736321452486 MAPE: 524.7801344951465 Pearson Correlation: 0.4688063536901193 Spearman Correlation: 0.5118622573407473 Coefficient of Determination: 0.06132015036223193 RMSE: 0.742660427141638 NRMSE: 0.18482875666151616 MAPE: 246.34557424145208 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['HCST', 'RITA1', 'RBM15B', 'PGA3', 'PBLD', 'KRTAP9-2', 'CYB5R3', 'FAM66A', 'OR4C12', 'DTX1', 'CYB5R4', 'CCL24', 'HOXC5', 'CERS1', 'MAPRE2', 'GATS', 'ATG4B', 'SPACA6P', 'ARSH', 'GNG4', 'OSGEP', 'UXT', 'USH1G', 'NALCN', 'MAP3K10', 'SBSN', 'ZNF202', 'SUPT20HL1', 'IL4I1', 'LOC93622', 'LEO1', 'PDS5B', 'RNF217', 'ZNF2', 'FGGY', 'SNORD62A', 'SERPINA13P', 'PNPLA6', 'FERMT2', 'FAM132A', 'RAI2', 'GADL1', 'VSTM4', 'EIF5A', 'LRRN4', 'NEDD1', 'ANKIB1', 'PLOD1', 'PDZD3', 'FOLH1', 'HTRA1', 'NTN3', 'C9ORF129', 'MYCNOS', 'FCRL6', 'HOXA6', 'C10ORF91', 'SLC8A2', 'ADCK3', 'KCNJ5', 'GALNT3', 'LINC01020', 'C5ORF60', 'RBM20', 'ZCCHC14', 'TTC13', 'FBXO27', 'LINC00592', 'LINC01300', 'OR51L1', 'SMIM6', 'FMN1', 'HSDL1', 'PHC2', 'SLC16A12', 'PAXBP1', 'TMEM44', 'CLPTM1', 'HMGB2', 'AGR3', 'DLK2', 'CCDC178', 'ADGRE3', 'TMEM110', 'TMCO5A', 'FAHD1', 'KCNQ4', 'EIF4E2', 'VARS', 'BMP8A', 'GALR1', 'ZNF645', 'NRG3', 'L2HGDH', 'PLA2G2D', 'LRP5L', 'ZNFX1', 'ICAM3', 'PDZD2', 'GALNTL5', 'TMED8', 'DCAF6', 'DEFB119', 'NUDT3', 'CALM3', 'FBXO18', 'CASC4', 'FAM58BP', 'DPCD', 'IFNL3', 'PUS7', 'SLC38A9', 'TRIM25', 'LRRC37A', 'QRFPR', 'ZNF70', 'JUNB', 'CCDC77', 'AMPD3', 'ORMDL3', 'NOXA1', 'AKAP12', 'PKN2', 'C9ORF89', 'ZNF398', 'NHLRC1', 'OR6C68', 'GLTSCR1L', 'C1ORF112', 'LOC728613', 'BAZ2B', 'SKA3', 'SUCNR1', 'SEPHS2', 'AOAH', 'NPAS1', 'INSRR', 'SDC1', 'MAGEB16', 'MEF2BNB-MEF2B', 'CLPS', 'TRIM35', 'GDAP1L1', 'GRAMD3', 'DDX28', 'TMEM56', 'NKAIN1', 'DMRTC1B', 'BRINP1', 'SP110', 'C19ORF45', 'C19ORF38', 'MS4A14', 'VPS37B', 'IL17D', 'KCNV2', 'CROCCP3', 'MUC6', 'FBXL16', 'HPVC1', 'FAM197Y2', 'ATP5G3', 'EXOC2', 'MOCOS', 'LCN9', 'HSP90AB1', 'PPIAL4E', 'TRIM36', 'KLF17', 'SNORD115-31', 'GOLGA2P5', 'HSPA1L', 'SFXN5', 'RANBP3L', 'LINC00114', 'GULP1', 'CD180', 'LCE1A', 'PDX1', 'RNFT2', 'SGOL1', 'DEGS1', 'CRTC3', 'PRDX2', 'PNPLA3', 'RPS6KB1', 'P2RX1', 'MANBA', 'HIST1H1E', 'FAM181A-AS1', 'PLEK', 'LYPLA1', 'RAB19', 'ZNF675', 'SNAP23', 'HHLA2', 'POLR2A', 'SKINTL', 'LGALS9', 'PRDX6', 'NOTCH1', 'LARP1B', 'ZIK1', 'TRIM34', 'IPO5', 'OR51B4', 'FAM188A', 'UBXN11', 'ID2B', 'GSTM2P1', 'ZNF74', 'OR52J3', 'SCARNA12', 'ZNF75A', 'C9ORF156', 'DBF4', 'PPIL2', 'LASP1', 'ST13', 'FMR1NB', 'MEOX2', 'DMXL2', 'RNASE1', 'UBE2D2', 'MSH4', 'FYN', 'CEACAM7', 'KIF25', 'ORAI1', 'HCG4B', 'IGFL1', 'OR13A1', 'TMEM125', 'USHBP1', 'SSR2', 'ZNF429', 'C3ORF17', 'VWC2L', 'CWC25', 'PCNAP1', 'RDH14', 'FAM71D', 'TYMSOS', 'COLQ', 'SUSD2', 'NSMCE2', 'LOC100268168', 'LAMA1', 'ACSF3', 'C4ORF45', 'PSMB8', 'ZNF688', 'TRIM9', 'COBLL1', 'ATP8A1', 'KRT27', 'RNASE2', 'TIMP2', 'ZFP36', 'LMBRD1', 'CD63', 'TTTY9B', 'OSBPL1A', 'KRT78', 'SCIMP', 'BRK1', 'MTHFD1L', 'SUN2', 'CAPZA3', 'APOF', 'ST5', 'TSPY4', 'CHRAC1', 'SERPINB7', 'SERPINA9', 'AWAT1', 'PYCR2', 'GPR161', 'DCDC1', 'ABCC6P2', 'ACACA', 'TAAR2', 'CCBL1', 'BAHCC1', 'FOXP4', 'PCDHB15', 'USH2A', 'PNCK', 'FJX1', 'CYP3A4', 'CD99', 'ECH1', 'MEGF9', 'MFRP', 'TXNRD1', 'CDC26', 'NPY6R', 'MRPL37', 'GTF2F1', 'ADGRB3', 'FBXO34', 'SP7', 'NEFH', 'VASP', 'NUTM2A-AS1', 'POU4F2', 'PIGL', 'SLC25A12', 'ZBTB38', 'CLEC18C', 'ESYT2', 'VPS4A', 'ACTN2', 'COLGALT1', 'SPATA24', 'UBQLN1', 'FOXA3', 'ABL2', 'SYT12', 'TGM7', 'LIMCH1', 'SLC16A1', 'SNORD33', 'GUCY1A3', 'GSTA5', 'PCF11', 'JAM3', 'C1QTNF9B-AS1', 'WDR33', 'MAFG', 'RNF19A', 'SPCS3', 'SMCP', 'CYTIP', 'MTMR10', 'RNPEPL1', 'MFSD9', 'SPERT', 'MYBPHL', 'NOA1', 'SUPT16H', 'BPTF', 'MYO1C', 'PTCHD3P1', 'CKAP2', 'OXR1', 'ANP32AP1', 'SPDYE1', 'MMP16', 'ATG16L1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.9535350345609711 Spearman Correlation: 0.8533956001401143 Coefficient of Determination: 0.9092290621351926 RMSE: 0.1544965512163433 NRMSE: 0.037284685478278665 MAPE: 38.00076889108437 Pearson Correlation: 0.4604309412804242 Spearman Correlation: 0.35502390010730667 Coefficient of Determination: -0.2853028570447793 RMSE: 0.4742014802985042 NRMSE: 0.25771959646438525 MAPE: 73.82836725796066 Predictor: ElasticNet Pearson Correlation: 0.9464643057664871 Spearman Correlation: 0.8394353188259162 Coefficient of Determination: 0.8957423289682325 RMSE: 0.16557676281938863 NRMSE: 0.03995867529487864 MAPE: 42.86559985648771
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.015797649190195884, tolerance: 0.014120986618491432 positive)
Pearson Correlation: 0.5613679918860282 Spearman Correlation: 0.4233001658374793 Coefficient of Determination: 0.06489953391417325 RMSE: 0.40447278524670843 NRMSE: 0.21982336058712737 MAPE: 67.51714818868936 Predictor: RandomForests Pearson Correlation: 0.8609777656747423 Spearman Correlation: 0.7112318290810835 Coefficient of Determination: 0.7363377980093381 RMSE: 0.26331118967708966 NRMSE: 0.06354494526077893 MAPE: 67.66096758407005 Pearson Correlation: 0.838504831940783 Spearman Correlation: 0.7368049090732464 Coefficient of Determination: 0.7002783863753199 RMSE: 0.22899141458166836 NRMSE: 0.12445253212336392 MAPE: 40.3690228887749 Protein: CCND1 x_train_column_count: 859 x_train columns: ['PHOX2B', 'ITIH2', 'C12ORF76', 'C14ORF80', 'HS2ST1', 'GUF1', 'HIST2H2BA', 'CEL', 'SLC25A5-AS1', 'PIK3CD-AS1', 'DAB1', 'ZFYVE9', 'DKC1', 'LIX1L', 'CA5BP1', 'F2RL1', 'WDR33', 'BRD7', 'PSMA2', 'CUZD1', 'CCL18', 'NOL4', 'OR8G2', 'MIB2', 'NLGN4X', 'TAF6L', 'GDI2', 'C19ORF45', 'RSAD1', 'RWDD3', 'SLC7A11', 'RPRML', 'GABRP', 'OR10J3', 'CDS1', 'IRF2BP2', 'EXOC7', 'CST2', 'ABHD11', 'PGK1', 'WBP5', 'STK19', 'SAT2', 'CSNK1A1P1', 'DUSP23', 'MLLT6', 'IGSF22', 'FBXL20', 'ZWILCH', 'OIT3', 'CCDC176', 'CST5', 'BCYRN1', 'SCGB2A1', 'PRDX2', 'MBD3L1', 'ZNF543', 'NEGR1', 'CYP4F3', 'GEMIN6', 'VGLL1', 'H1FNT', 'TAP2', 'LRRFIP1', 'SHCBP1', 'LOC401127', 'CCDC107', 'SNORD114-16', 'PLB1', 'SEC61G', 'ROPN1', 'DEFA1B', 'PCDH7', 'TRIM78P', 'PPP3CB', 'POTEF', 'XYLB', 'TPD52', 'HSD17B4', 'THBS2', 'CHPF', 'PCDHGA1', 'CFAP57', 'NUB1', 'TTC28-AS1', 'METTL13', 'COX7B2', 'PBLD', 'HTR7P1', 'SYTL5', 'SEC22A', 'CRYGA', 'RASSF1', 'ATP1A1-AS1', 'MTHFD1L', 'BBOX1', 'TRAPPC5', 'ZBTB5', 'INS-IGF2', 'GRIA1', 'OR5B2', 'DNAH3', 'C9ORF50', 'CLK4', 'DOCK11', 'SNORA28', 'SNORD66', 'VBP1', 'DFNB59', 'GOLGA3', 'PSMD9', 'SEH1L', 'C7ORF50', 'TNS4', 'ERCC1', 'DGKI', 'ZNF385A', 'LRRC25', 'PABPC4', 'RAP2C', 'MIER2', 'STK26', 'PFKFB3', 'PCDH11Y', 'RBP1', 'FAM182A', 'AP1S3', 'EDRF1', 'TSPAN33', 'HCCS', 'STX3', 'THAP10', 'RNF114', 'CAP1', 'EPS8', 'OS9', 'ZNF674', 'GPX8', 'GRB2', 'TMPRSS2', 'C1ORF204', 'ZDHHC17', 'TCF7', 'PVRL2', 'COG1', 'OTOP2', 'HES2', 'TTC9C', 'ZNF263', 'SUOX', 'KRT9', 'ZNF717', 'TONSL', 'THUMPD2', 'LINC00982', 'ZNF24', 'ZMYND10', 'LIPG', 'EXTL2', 'GID8', 'CHRNA4', 'MKNK1', 'GNG12', 'RDH10', 'ZNF750', 'PIK3C2G', 'SEPT1', 'P4HTM', 'PTPRR', 'GAK', 'UBE2MP1', 'ITGB4', 'C20ORF194', 'ZNF593', 'SRCAP', 'TMEM230', 'FES', 'MAPKAPK5', 'AQP3', 'RAD1', 'OCA2', 'CD40', 'ERBB2IP', 'RALGDS', 'CLTA', 'C1QL1', 'SPOCK1', 'RAD51B', 'GATM', 'RBPMS2', 'ZNF767P', 'VDR', 'PHKB', 'FIZ1', 'NXF1', 'VIT', 'SRP72', 'ARHGEF1', 'OAZ3', 'FAM83A', 'CPNE5', 'CIDECP', 'ESF1', 'MT4', 'SOX15', 'CHIC1', 'KIAA1755', 'HIST1H4C', 'IL4R', 'SERPINE2', 'FAM208B', 'NBPF22P', 'FAM96A', 'SNORD126', 'SWI5', 'TSIX', 'OR56A3', 'ZNF714', 'OSGEP', 'F2R', 'NAA15', 'ARHGEF3', 'PRMT9', 'NACC2', 'IWS1', 'IL12B', 'UBXN10', 'PAPOLB', 'PSMD12', 'FUBP3', 'TMEM182', 'NANOS3', 'HBG2', 'RPL6', 'SEMA3D', 'CCNB1IP1', 'SNORD86', 'DCUN1D4', 'SERPINB6', 'LRRC70', 'PTPRS', 'NAA30', 'WNT8A', 'CDK16', 'MTMR4', 'TEX13B', 'CCDC65', 'MAP1B', 'DHRS7', 'CYP17A1', 'TRIM9', 'SMG8', 'TADA2A', 'NUDT13', 'ALG3', 'CDC45', 'CC2D1B', 'C4ORF45', 'INPP5D', 'MED13', 'RGS9', 'IFNLR1', 'OR2C3', 'BRDTP1', 'KIF18A', 'PTGES3', 'STC1', 'CDC42SE2', 'ULK4P3', 'MAZ', 'AGMAT', 'BPIFC', 'SMARCA1', 'TOE1', 'GCAT', 'CXADRP2', 'LHX2', 'ROBO3', 'KRTAP12-1', 'FLYWCH2', 'C1QL3', 'SNORD81', 'LIN7A', 'KCNK12', 'OR2L2', 'SMAD9', 'AKAP10', 'ATP5L', 'SERPINB2', 'C1ORF110', 'RCVRN', 'CSGALNACT2', 'FOXR1', 'RABL2A', 'C21ORF62-AS1', 'ZNF331', 'DPY19L2', 'PFN1P2', 'TFAMP1', 'OR10R2', 'LYZL6', 'EDDM3B', 'PMS2P3', 'GFI1', 'RNASEH2B', 'SLC7A7', 'SKINTL', 'ZNF333', 'SPTSSB', 'MUC16', 'RAB39B', 'APOLD1', 'MIR1-1HG', 'OR10P1', 'MX2', 'GPR176', 'ZNF786', 'CLCN1', 'IGFLR1', 'ZBTB20', 'LEO1', 'OR5M9', 'STAC3', 'TMEM120B', 'CX3CR1', 'C11ORF74', 'SMIM20', 'WDR64', 'ANKRD28', 'CCDC7', 'ARID1A', 'NR1H2', 'BCAS4', 'PGC', 'RCN3', 'KDR', 'TMED1', 'DGCR2', 'RUVBL1', 'PGK2', 'LINC00152', 'CACNG5', 'GTF2A2', 'FTMT', 'ZACN', 'C1GALT1C1', 'PAX8-AS1', 'OSCP1', 'TPRA1', 'ARL15', 'AGR3', 'SNORD114-30', 'FCGR2C', 'ZBP1', 'ANXA2P2', 'HDC', 'CNPY4', 'ARL4D', 'CCDC183-AS1', 'TMEM8A', 'EVI5L', 'LOC613037', 'KRIT1', 'GDNF', 'KPRP', 'CLDN2', 'AGBL4', 'C10ORF67', 'SNORD111B', 'P2RY2', 'ZNF426', 'GYPA', 'GCSAM', 'SETD6', 'CLU', 'AMPH', 'TBC1D5', 'TMEM256', 'METTL18', 'TAS2R13', 'EXOSC7', 'TACC2', 'LIMS2', 'GAGE8', 'IER5', 'SP1', 'ADORA2B', 'SNORD85', 'SUGP1', 'PRAMEF20', 'SCGB3A2', 'LHFPL3-AS2', 'MMP15', 'KRTAP20-4', 'DCDC2B', 'HAL', 'FAM63A', 'XIAP', 'KLHL34', 'EPS8L3', 'RGS20', 'ZNF789', 'TNFRSF4', 'PDE1B', 'HEATR1', 'GREB1L', 'TMIGD2', 'HADHA', 'ZNF572', 'PSMA1', 'LGALS9C', 'SYT5', 'CRIP2', 'SS18L2', 'FAM66D', 'SCARNA8', 'LBX2', 'CALR', 'SRSF11', 'BIN3-IT1', 'LIPF', 'OPN1MW', 'RCAN1', 'RAB5C', 'JAM3', 'YEATS2', 'DNAJA1', 'TREX1', 'SPATA31A5', 'MRPS33', 'DHRS9', 'ATRIP', 'RAD9A', 'YY2', 'C15ORF62', 'PEX16', 'KCNAB2', 'UBA6', 'FAM175B', 'RPP14', 'TCAF1', 'FAM131B', 'PRELID1', 'CATSPERG', 'SPAG8', 'ZNF645', 'GSTO1', 'PRKCE', 'EPHB3', 'SNORA53', 'MATR3', 'SELM', 'SNORD115-44', 'TBX15', 'XPO5', 'CYP1A1', 'NGRN', 'CLN6', 'ARFIP2', 'HSPA1B', 'IDS', 'APOC1P1', 'AP3D1', 'EIF2S2', 'ERMARD', 'OR6K2', 'ILF3', 'RPRM', 'TMEM98', 'ZNF292', 'RITA1', 'OTOR', 'OR10H2', 'SLC25A28', 'MSTO2P', 'ARL14', 'ANKRD35', 'PTTG2', 'PPIL6', 'SNORD116-11', 'RERGL', 'ADCY2', 'UBE2D1', 'DIAPH2', 'MDFIC', 'KRT73', 'PILRB', 'SLC22A25', 'PRCD', 'EPHX3', 'MAN1C1', 'CYSLTR2', 'FAM184A', 'CPTP', 'OR4N5', 'KNG1', 'CSTA', 'OR4C6', 'CLEC2L', 'ELMOD1', 'ARPC2', 'G3BP1', 'ISY1', 'TSNAXIP1', 'PPP3CA', 'ARMCX1', 'TOP1P1', 'FCRLA', 'PCDHB7', 'CAMSAP3', 'SAP30BP', 'SPRR2C', 'CDNF', 'FPR3', 'IKZF2', 'CEP83-AS1', 'PEX11A', 'NRM', 'LINC00910', 'CP', 'CHRNA1', 'FRYL', 'RAB35', 'ANKRD22', 'TNXB', 'STIM2', 'OR2C1', 'CLIC5', 'MAP4K3', 'RAN', 'TSSK1B', 'ADAMTSL5', 'POLR2I', 'PPAPDC1B', 'SLCO2A1', 'GPR68', 'PPP1R26', 'SPEN', 'GTDC1', 'LRRC45', 'DEFB132', 'MAPK10', 'RNFT2', 'RAP1GAP2', 'PALMD', 'CLPS', 'PPP1R14A', 'POSTN', 'NEMF', 'KRT82', 'ELOF1', 'CDC6', 'SNORA30', 'NPS', 'CCDC36', 'HIST1H4L', 'C10ORF131', 'GSE1', 'MEFV', 'CREBZF', 'PCDHB8', 'IL2RA', 'ITGA9', 'SEMA5B', 'GDF2', 'HPDL', 'PIM2', 'GNA11', 'LSM3', 'UGGT2', 'AURKB', 'ZNF436', 'ID2B', 'ZKSCAN1', 'RFX5', 'PRSS57', 'WEE2-AS1', 'WBP1L', 'SRSF1', 'SNORD115-45', 'CKMT2', 'RBM26', 'BDKRB2', 'CDKL1', 'TP53I13', 'TNFRSF13C', 'TECTB', 'TTLL5', 'ABHD17C', 'TCAF2', 'ZNF577', 'PRCP', 'NACAP1', 'IDH1', 'RPL21', 'HAND2', 'PCSK6', 'FBXL8', 'NRADDP', 'CD274', 'B4GALNT2', 'PEG10', 'LSM6', 'CDC37', 'ZW10', 'CRCP', 'SLC17A4', 'DGKA', 'LRRC6', 'FAF1', 'HRNR', 'EMC6', 'STYXL1', 'G6PC3', 'EFHD1', 'PDGFA', 'LOC344967', 'SYNJ2', 'MTX2', 'CSTF2T', 'COL21A1', 'CD3EAP', 'FAIM2', 'IFNK', 'GRM6', 'ATP1A4', 'PTRH1', 'LRRC47', 'CIAO1', 'RTN3', 'ZFYVE28', 'ANKRA2', 'ODAM', 'MAB21L2', 'MAATS1', 'PABPC5', 'RPS7', 'COQ9', 'DERL2', 'CENPK', 'EIF5B', 'BPIFB3', 'TNFRSF13B', 'KHDC3L', 'C4ORF17', 'ARNTL2', 'ZUFSP', 'EPB41L4B', 'PRR14', 'TSR1', 'NCR2', 'MRGBP', 'IRGC', 'PSMA6', 'SH3RF1', 'CA9', 'EPHA3', 'ST13', 'GCNT1', 'SPACA6P', 'FBLN1', 'POLR3H', 'UGT2A3', 'IFNB1', 'TUBB2A', 'SUSD5', 'TSEN54', 'GCLC', 'RNMT', 'MESDC1', 'NICN1', 'GCA', 'GALP', 'RNF150', 'PECR', 'GOLGA8A', 'LINC00242', 'VEGFC', 'TSPAN3', 'MGC72080', 'SNORA31', 'ZNF221', 'DNAJB11', 'SNORD17', 'PACSIN1', 'ARHGAP18', 'SNORD115-32', 'RASGEF1A', 'OGFOD1', 'BTBD17', 'PYCR1', 'HLA-DRB1', 'SPRY2', 'LOC389705', 'RAB38', 'DBF4', 'ATP5O', 'CLEC11A', 'EVL', 'ALDOB', 'SNRPE', 'HOXC12', 'SPRR3', 'PATE4', 'KLC3', 'BCL10', 'TBC1D25', 'IL9', 'PFDN2', 'TNMD', 'LGALS14', 'UBQLNL', 'ZSCAN10', 'CT45A2', 'MGST3', 'SEPT10', 'FCGR1A', 'POM121L2', 'LOC389332', 'ETAA1', 'C9', 'ADGRE4P', 'C1QTNF2', 'KRT6A', 'SLC25A23', 'SH2D4B', 'MAN2B2', 'GRIA3', 'TSHR', 'MAT2B', 'ELOVL2', 'SYCP3', 'PTPRO', 'ADRM1', 'WDR47', 'MAP3K4', 'ZNF585B', 'POU6F2', 'MRPL55', 'C3', 'ZNF800', 'BCLAF1', 'FAM217B', 'DDAH2', 'BIVM', 'C4ORF48', 'KRT31', 'GPN2', 'IRF9', 'FAM195B', 'IRF7', 'LRRC71', 'RPP25L', 'SPRR2F', 'DNMT1', 'AFG3L1P', 'HS3ST5', 'FAM150A', 'C8ORF86', 'RSPO4', 'PPP1R3F', 'ZNF253', 'SIRPA', 'RALGAPB', 'IFITM2', 'SOCS1', 'LIMD1', 'NFS1', 'LOC284023', 'AMPD2', 'COA3', 'HSPA12B', 'YBX1', 'DDX27', 'NMB', 'MED6', 'SEMA3F', 'PABPC3', 'PRKAB2', 'C1ORF226', 'BCL11B', 'TSPYL4', 'NDUFA7', 'GABPA', 'C19ORF12', 'SDC4P', 'ICE1', 'CWC27', 'SNORD27', 'DIP2B', 'CAPZB', 'GPD1L', 'MEG8', 'PAPLN', 'RHPN2', 'NR0B1', 'L3HYPDH', 'PLAT', 'B3GNT9', 'MSX1', 'PDK3', 'MCM2', 'SPTBN4', 'COL7A1', 'KIAA1257', 'SIRT2', 'PGAP2', 'CD33', 'MS4A13', 'SLC25A20', 'LRRK2', 'CARTPT', 'IL6ST', 'CCDC64', 'ATP6V1G1', 'KBTBD7', 'KCNC1', 'FBF1', 'FAM150B', 'FAHD2CP', 'PCNA', 'C12ORF73', 'SNORD38B', 'EPS15L1', 'EBPL', 'UFC1', 'YEATS4', 'STH', 'BOC', 'PDC', 'C3ORF38', 'ZNF814', 'LOC145474', 'HMP19', 'INMT', 'PWAR1', 'SCARB2', 'NLRP4', 'SNORA71B', 'UBN2', 'DHX37', 'MED17', 'NAIP', 'HAND1', 'TRAP1', 'NRIP2', 'IGF1R', 'PLBD1', 'TUBBP5', 'HDAC5', 'PSMD14', 'ZNF835', 'SEPT7P9', 'PCGF2', 'FHOD3', 'MUTYH', 'ERBB4', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 5.2853243448081984e-15 NRMSE: 3.1773841512114793e-15 MAPE: 1.654853681258763e-11 Pearson Correlation: 0.1739897323613128 Spearman Correlation: 0.17989952199785392 Coefficient of Determination: -17.60783163398195 RMSE: 1.0155679487030989 NRMSE: 0.7857027516734998 MAPE: 4148.097194585921 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.3605854513202739, tolerance: 0.003060830225233494 positive)
Pearson Correlation: 0.9991826628216053 Spearman Correlation: 0.9988070991924484 Coefficient of Determination: 0.9982415259043275 RMSE: 0.010011530282168366 NRMSE: 0.0060186424848615305 MAPE: 20.615009669381443 Pearson Correlation: 0.11514822755868985 Spearman Correlation: 0.16350599941469127 Coefficient of Determination: -20.302102313297258 RMSE: 1.086606591762397 NRMSE: 0.8406624000142331 MAPE: 2363.429399659273 Predictor: RandomForests Pearson Correlation: 0.5911866537010902 Spearman Correlation: 0.5693983441818711 Coefficient of Determination: 0.31095389707176446 RMSE: 0.19817853707975197 NRMSE: 0.11913920542000937 MAPE: 461.19592477419405 Pearson Correlation: 0.24912770196278144 Spearman Correlation: 0.38639157155399473 Coefficient of Determination: 0.03978603608643272 RMSE: 0.2306986806747542 NRMSE: 0.17848198975270332 MAPE: 327.3779945664579 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['CRABP1', 'C3AR1', 'MED30', 'ZNF804B', 'BEAN1', 'GDF6', 'CELSR2', 'CPLX3', 'GPR4', 'C16ORF54', 'CLP1', 'LINC01555', 'OR51E2', 'SRSF12', 'CACTIN', 'FANCM', 'CHTOP', 'PFN4', 'LYZL4', 'SLC13A5', 'SMNDC1', 'NETO1', 'LINC00643', 'MORF4L1', 'CDC37L1', 'ZFYVE21', 'C14ORF166', 'CAPN10', 'GPA33', 'ELOVL2', 'FLJ16779', 'GRIK2', 'CLGN', 'AJUBA', 'EMC6', 'KRTAP13-1', 'EPC2', 'ARHGAP30', 'KRAS', 'TMCO5A', 'ABCC6P2', 'DEPDC5', 'ENSA', 'SAR1B', 'C7ORF43', 'ANAPC16', 'ARCN1', 'OR13A1', 'HBA2', 'ALCAM', 'CYMP', 'AP2S1', 'HOXD12', 'SREK1IP1', 'CLPP', 'CLIP2', 'EXOC3-AS1', 'XIST', 'UBQLN4', 'RHBDF2', 'DPP10', 'DCDC1', 'KRTAP1-3', 'TNFSF14', 'RPS6KA3', 'USP12', 'RRBP1', 'AKT3', 'ARAP3', 'NCKIPSD', 'TNFRSF6B', 'MLYCD', 'PARPBP', 'MED12', 'TMSB4Y', 'HRSP12', 'SLC4A1AP', 'TLX1', 'EGF', 'DTNBP1', 'FAM214B', 'TUBA1C', 'KPNA7', 'SNX2', 'MAGEA1', 'ZSCAN32', 'LOC340017', 'BMP7', 'GPI', 'SNCG', 'METRN', 'VPS29', 'BMP5', 'KIAA1875', 'GFM2', 'RHBDF1', 'RPS5', 'KCNJ14', 'ZMYM5', 'ZNF587', 'AFF1', 'ZNF408', 'RBP1', 'ARX', 'TPTEP1', 'CROCCP2', 'IFRD1', 'C12ORF77', 'RASSF8', 'FARS2', 'EPOR', 'ZFP14', 'CSN2', 'CDRT1', 'SDHAP3', 'CYP2D6', 'CEBPA-AS1', 'OR11L1', 'NRP2', 'LOC100132215', 'ZC3H11A', 'MAP3K19', 'CASP6', 'SNORA49', 'MGMT', 'ATP5J2', 'LOC90784', 'ZNF395', 'ZDHHC17', 'HCFC2', 'CDH17', 'TULP2', 'AGR3', 'CABP5', 'VTRNA1-1', 'VTN', 'COL26A1', 'ITPK1', 'ISCA2', 'CHRNG', 'KLHL35', 'GPR45', 'CD59', 'LOC440173', 'NCF4', 'CXCL3', 'MAS1L', 'CLEC4C', 'TRIM61', 'SRP14P1', 'MBD1', 'ANKIB1', 'SERTM1', 'WDR13', 'TNNT2', 'OPN1LW', 'NME3', 'DEPDC1B', 'HLA-DPB1', 'DET1', 'GPR61', 'VPS28', 'SLC27A4', 'EXOC7', 'SNORD115-2', 'RNF20', 'HDC', 'SPCS3', 'TEX14', 'SEC23B', 'BOLA2', 'HDAC2', 'VWA5A', 'BLM', 'RNPEPL1', 'PRAMEF17', 'A2M-AS1', 'CPTP', 'NGFRAP1', 'REM1', 'CLDN8', 'SORL1', 'POU2AF1', 'MAML2', 'NUP153', 'CEP170B', 'RPS26P11', 'LRGUK', 'TMEM86B', 'CCDC113', 'TMC6', 'FADS1', 'MAB21L3', 'SNORA23', 'C12ORF43', 'AIM1', 'SPTBN2', 'PAX1', 'FAM189A1', 'USP25', 'LINC00882', 'COMMD8', 'FAM9C', 'ZNF841', 'INO80', 'KDM8', 'CLIC4', 'GJA9', 'ZP1', 'EIF1AX', 'PDCD2', 'NAA38', 'CDCA5', 'GCNT2', 'OR2L2', 'ZKSCAN7', 'IRX1', 'TRAF5', 'KRT23', 'SSR4', 'FERMT3', 'STRA6', 'TBC1D3P1-DHX40P1', 'ARMS2', 'IGIP', 'KRTAP17-1', 'CDH16', 'ATXN1L', 'MRPL23', 'FAM66E', 'SLC28A1', 'MTERF3', 'CIITA', 'TMC1', 'INGX', 'GATA1', 'ZKSCAN5', 'GOLGA8IP', 'DYNLRB2', 'VCAN', 'HIPK1', 'GPR141', 'KLHL3', 'C10ORF95', 'CEACAM18', 'KALRN', 'FAM126B', 'PROZ', 'NF2', 'NAGK', 'PEX6', 'COL1A1', 'MB21D2', 'SP110', 'NUCB1', 'SUPT20HL2', 'ATRX', 'FOXL2', 'THG1L', 'PSME1', 'ARV1', 'RAB42', 'IL7R', 'SDR42E1', 'C6ORF47', 'ERH', 'YAF2', 'DYX1C1', 'IL23R', 'PYGM', 'RNASEL', 'ICAM3', 'SNX15', 'KLRG2', 'HPVC1', 'PTTG3P', 'TNIP3', 'ENOSF1', 'KRT13', 'TAF1', 'RBM41', 'KCNV1', 'MT1E', 'FOXB1', 'GBX2', 'CCP110', 'NOVA2', 'GGA3', 'AUTS2', 'OR1J2', 'SERINC5', 'COPS7B', 'MRPL4', 'INPP5D', 'TTC17', 'ETV6', 'C3ORF20', 'KIAA0895L', 'PRKD3', 'ZNF772', 'CMAS', 'FN3KRP', 'SNHG15', 'ELAVL1', 'IGF2-AS', 'INSL4', 'PCGF5', 'XPOT', 'HSD3B2', 'SNORD19', 'KLHL8', 'LY6G6F', 'GKAP1', 'EIF3D', 'TUSC5', 'FAM171B', 'GAB2', 'TMEM31', 'SLC8A2', 'ARHGAP9', 'DGCR5', 'SRRM1', 'BAX', 'KCNB2', 'SEPT12', 'ARL1', 'KLK4', 'CYB5D2', 'APOBEC4', 'NKX6-2', 'PAX8', 'MSTO2P', 'TNS2', 'C9ORF139', 'OR9I1', 'MTM1', 'WRAP53', 'ZBED3', 'TTBK2', 'PTPMT1', 'TECPR1', 'KDM6B', 'USP16', 'HRNR', 'YTHDF2', 'TPD52L3', 'LYRM7', 'OR4D2', 'SLC44A2', 'RPL36', 'TMEM107', 'OR10W1', 'CHN2', 'C19ORF57', 'HSPB6', 'MCRS1', 'SNORA66', 'RPAIN', 'FSCN3', 'C22ORF39', 'PAPOLB', 'KIAA1191', 'MMD', 'LINC00628', 'FAM107A', 'CYP1A1', 'JMJD6', 'CCDC137', 'POLR2A', 'TAOK2', 'SIGLEC12', 'SNORD49B', 'RFPL3', 'TMEM189-UBE2V1', 'PI15', 'OR6K6', 'HAO1', 'ANKRD36', 'RORB', 'PROCR', 'ADGRG5', 'CCL8', 'ZDHHC16', 'GNL3L', 'LRRC14B', 'PIF1', 'DHX33', 'ZBTB38', 'AIFM2', 'NPR2', 'S100A5', 'ZNF20', 'MLH3', 'EBI3', 'SFMBT2', 'RGS9BP', 'STOX2', 'MMACHC', 'OR14A16', 'NACC1', 'APOA4', 'ATM', 'LINC00112', 'SCARNA18', 'ARRB2', 'PAPOLG', 'C1ORF61', 'TAS2R8', 'PTCHD3P1', 'NTN4', 'MTHFSD', 'NR1I2', 'PTPRCAP', 'SATB2-AS1', 'RNF126', 'SMCHD1', 'MYO18A', 'SLC43A1', 'HAO2', 'RDX', 'SNORD23', 'CCDC102A', 'COLEC12', 'DPH3P1', 'UNC5D', 'FZD10', 'SEPN1', 'BMP10', 'STAG3', 'NDUFA1', 'CTH', 'UMPS', 'UGT2B10', 'ART5', 'WASF3', 'TET1', 'APBB1IP', 'ZHX1', 'CNTROB', 'ELF5', 'TRMT13', 'RPL28', 'KIF3B', 'PGA5', 'AS3MT', 'C2ORF57', 'MRPL51', 'TBC1D2', 'MRC1', 'MMS22L', 'WDR5B', 'TRIM6', 'METTL22', 'TONSL', 'OR52A5', 'MND1', 'PROK1', 'NOL11', 'C12ORF4', 'TMEM220', 'METTL24', 'SPC25', 'DNMBP-AS1', 'BLID', 'SMEK3P', 'MUTYH', 'CAPZA2', 'NCOR2', 'EXT2', 'CD47', 'LYL1', 'KLHL4', 'PRIM1', 'ALDH1L2', 'PRPF18', 'VSX1', 'C1ORF162', 'MAP3K10', 'C9ORF72', 'GALNT7', 'DRAP1', 'HKDC1', 'IMMP1L', 'IKZF3', 'IFIT2', 'CD70', 'SMARCA5', 'NKX2-1', 'GTPBP2', 'GEMIN8P4', 'OR51G1', 'SNRPB2', 'CFI', 'SLC39A11', 'BANF1', 'VLDLR', 'MGC16275', 'FBXO24', 'TINF2', 'OSTC', 'TAF13', 'NEUROD1', 'MTNR1A', 'CFAP58', 'CBLB', 'RGL3', 'PIGZ', 'GABPB1', 'FAM45A', 'MMP25', 'DLX6', 'EPHX2', 'FAM160A1', 'SPATC1', 'TWISTNB', 'ZDHHC21', 'SNORD72', 'STK36', 'LOC100129034', 'RNH1', 'BLOC1S3', 'CDK19', 'OR8H2', 'HCN4', 'KRTAP20-4', 'FUT3', 'CLEC1A', 'SDK1', 'WDR18', 'OR6C2', 'SLC17A9', 'MRPL52', 'NINL', 'OR3A3', 'OR6B3', 'IRF8', 'ADGRF4', 'RGS11', 'PEMT', 'FAM127C', 'ZNF43', 'ZMYND19', 'ZNF441', 'FBXO9', 'CDC42EP3', 'GSTA1', 'CGB8', 'LINC00937', 'MIR205HG', 'SLC17A3', 'BTBD2', 'PIP4K2B', 'TPM3P9', 'DENND5B', 'TMEM212', 'SCCPDH', 'LCE4A', 'AKT2', 'FOCAD', 'OPA3', 'OLA1', 'SPIB', 'WDR25', 'MEPE', 'CLDN14', 'PLCL1', 'CACNA1B', 'RGS13', 'GIP', 'SNORD44', 'CALR', 'ECE1', 'RNASE11', 'CRYL1', 'FIP1L1', 'IDE', 'FUT6', 'MRPS9', 'LINC01547', 'WDR27', 'SLC25A35', 'PCDHA8', 'CD200R1L', 'TM9SF1', 'TG', 'P2RY10', 'TRAT1', 'NXF1', 'C20ORF27', 'FAM114A1', 'ZC3H18', 'FAR2', 'BPY2', 'EEF1E1', 'FAM186B', 'TGIF1', 'TMEM63C', 'FAM32A', 'LPAL2', 'SOAT1', 'SNORD115-14', 'MRPL12', 'GIGYF2', 'RBM11', 'EBNA1BP2', 'NANOS1', 'ZFAND6', 'VSIG2', 'RRP1', 'TEX12', 'CDYL2', 'FBN3', 'PSPC1', 'ZNF618', 'SSX5', 'DNTTIP2', 'ST13', 'LINC00410', 'CRISPLD2', 'RHOT2', 'GFPT1', 'QPCTL', 'GOLGA7', 'NKPD1', 'FNDC7', 'C17ORF51', 'GOT1', 'EFR3B', 'FAM181A', 'NPHS2', 'HOXD8', 'TTLL2', 'CBX3', 'PRDX6', 'TEFM', 'FAM69A', 'SCAPER', 'GRK4', 'SDCBP2', 'HLA-J', 'CCL24', 'ZYX', 'RAMP3', 'ITGB3BP', 'CLEC1B', 'HS6ST2', 'GJA10', 'CT45A3', 'ATP5I', 'TMUB1', 'RHBG', 'ARL3', 'NELL2', 'TMEM184A', 'STK39', 'ANKHD1-EIF4EBP3', 'H3F3AP5', 'ZBTB37', 'GBP4', 'SLC6A10P', 'N6AMT2', 'TMEM217', 'VEGFA', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 3.3841555014235856e-13 NRMSE: 6.073175352051372e-14 MAPE: 1.9084482556240666e-10 Pearson Correlation: -0.002552211743449727 Spearman Correlation: 0.14982440737489028 Coefficient of Determination: -1035.6911229932084 RMSE: 34.0394474192735 NRMSE: 5.799180097666576 MAPE: 46954.11285388711 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 3.459465479110303, tolerance: 0.0518906404354321 positive)
Pearson Correlation: 0.998326521352598 Spearman Correlation: 0.9953954898835533 Coefficient of Determination: 0.9966283005498967 RMSE: 0.05707971553814297 NRMSE: 0.010243474963326268 MAPE: 42.62364752051736 Pearson Correlation: 0.16507487762048825 Spearman Correlation: 0.23037264657106626 Coefficient of Determination: -16.06972967210352 RMSE: 4.3678843727497245 NRMSE: 0.7441409906383162 MAPE: 15912.686370674686 Predictor: RandomForests Pearson Correlation: 0.8501706292916049 Spearman Correlation: 0.6991545255593542 Coefficient of Determination: 0.7189052935997544 RMSE: 0.5211751571894813 NRMSE: 0.09352962998931881 MAPE: 270.62581054825915 Pearson Correlation: 0.8037860496237277 Spearman Correlation: 0.5428697856317868 Coefficient of Determination: 0.6247529261497631 RMSE: 0.6476143577899718 NRMSE: 0.11033176444962635 MAPE: 1412.2341979990701 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['CCDC105', 'DNAH2', 'LACC1', 'TNNC1', 'GSTM2P1', 'FAM167A-AS1', 'RASSF3', 'TOPBP1', 'DYNLT3', 'FAM74A3', 'ELFN1', 'SMEK3P', 'FMO3', 'NPHS1', 'NOL11', 'MAP2K5', 'BOLA1', 'WFDC13', 'CSRP2', 'BTN2A3P', 'HIST1H3E', 'MEP1B', 'SNRNP200', 'NHLRC1', 'ARRDC5', 'COBL', 'HOGA1', 'IL17C', 'TRABD', 'MAS1', 'METTL3', 'MICAL1', 'CNP', 'CLSTN2', 'INTS4P2', 'MAPK6', 'KIF1BP', 'RAB40A', 'KDM7A', 'CABP4', 'ARC', 'HKDC1', 'RCOR3', 'PTGIR', 'CSMD1', 'GAGE1', 'MYO6', 'SRRD', 'COL6A2', 'RNF31', 'IQCD', 'IPO9', 'AGER', 'CELF1', 'FAM13C', 'PAGE2B', 'CALCB', 'GAS2L1', 'GOSR2', 'TFPT', 'SDC1', 'HLA-DRA', 'VASN', 'PPP1CA', 'CREBBP', 'CECR5-AS1', 'TUBD1', 'TSPAN16', 'PHOX2A', 'ALOX12P2', 'MMADHC', 'ZNRF1', 'SAV1', 'CP', 'KLHDC3', 'RIC1', 'MRGPRD', 'FGFBP3', 'PDZD2', 'SUV420H1', 'VSTM5', 'NEU2', 'WHAMMP3', 'OR56A4', 'ZNF18', 'SCNN1B', 'C9ORF89', 'ZSCAN23', 'MATN2', 'TOX4', 'PAQR8', 'SNORA77', 'PPP1R7', 'LILRA5', 'RMND1', 'KCNK17', 'LRP8', 'OCLM', 'GPR179', 'MBD4', 'BACH1', 'NKX2-8', 'CREB3L2', 'TRMT1L', 'PTGS2', 'TAOK1', 'TRIM61', 'HLF', 'MED6', 'LOC392196', 'NUBPL', 'ERCC3', 'ZNF800', 'STKLD1', 'PFKM', 'KLHDC7B', 'SGIP1', 'TEKT4', 'ATG5', 'PLCXD3', 'ZNF99', 'TMEM255B', 'ARHGEF2', 'EGFEM1P', 'MRPL13', 'QTRTD1', 'MUM1L1', 'ABCB10', 'EPM2AIP1', 'KRT24', 'SUZ12', 'CEP76', 'LYZ', 'ACIN1', 'SELM', 'GPATCH8', 'LOC100132111', 'IPO5', 'CTAG2', 'MTM1', 'LDLR', 'MKKS', 'TMEM200B', 'LMCD1', 'LY6G6C', 'TSTA3', 'ZNF83', 'TDRG1', 'ZNF296', 'GATA3-AS1', 'FGF4', 'GIN1', 'NEIL3', 'FHOD3', 'TADA1', 'KLHL26', 'TMEM53', 'RIPK1', 'CMPK2', 'SH3GLB1', 'DYNLL2', 'C4ORF29', 'ZDHHC6', 'THAP9', 'CLEC12B', 'MCMDC2', 'DEFB105A', 'MC4R', 'LMF1', 'DMXL1', 'MUL1', 'EXOSC1', 'ARMCX1', 'C1QTNF2', 'ZFAND2B', 'ARNTL', 'GLUD1', 'MAP1S', 'NUFIP2', 'PABPC3', 'SPTB', 'NDUFA9', 'SLITRK5', 'GNB4', 'FAM63B', 'LEP', 'PEAR1', 'PXDN', 'NGLY1', 'NLRP12', 'ARFGEF3', 'PLEC', 'TPP1', 'UQCRFS1', 'SYNGR3', 'ATP6AP2', 'PRSS3', 'TWF2', 'CPNE9', 'RTN4R', 'SNORD50A', 'ADORA1', 'TAF10', 'AQP4-AS1', 'CHD8', 'CLEC4A', 'ZNF30', 'OR52H1', 'GDAP1L1', 'KCNJ6', 'AQP12A', 'GHRH', 'HILS1', 'DHH', 'LINC00320', 'TCERG1', 'MYO9B', 'CSN1S2AP', 'PRMT5', 'CACNG1', 'DBI', 'ANKMY2', 'MCOLN3', 'SCARNA15', 'SNORD42B', 'THSD4', 'SKIV2L', 'POP5', 'ABR', 'UNQ6494', 'SDHAF2', 'HOOK3', 'KCNE3', 'S100G', 'CCDC88C', 'RELN', 'SNAI2', 'NKTR', 'ZNF641', 'RPS26P11', 'CDS2', 'ITIH1', 'FAM171B', 'CHD5', 'RLN3', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.7413822038397982 Spearman Correlation: 0.7425321634308105 Coefficient of Determination: 0.549647572170356 RMSE: 0.2987212400025919 NRMSE: 0.08061628889252698 MAPE: 198.20195060586653 Pearson Correlation: -0.024215926390150324 Spearman Correlation: 0.2516730075114624 Coefficient of Determination: -9582.070456139485 RMSE: 50.68667769828366 NRMSE: 18.70640122612043 MAPE: 7974.948877054774 Predictor: ElasticNet Pearson Correlation: 0.7269479385746485 Spearman Correlation: 0.7270397740813175 Coefficient of Determination: 0.5283493202795512 RMSE: 0.30570326809296083 NRMSE: 0.08250053787858512 MAPE: 203.8506526483979 Pearson Correlation: -0.02100418206233174 Spearman Correlation: 0.2564188859623452 Coefficient of Determination: -1869.36860221336 RMSE: 22.39262911784016 NRMSE: 8.264213079410597 MAPE: 3732.9462753016883 Predictor: RandomForests Pearson Correlation: 0.5717159164885429 Spearman Correlation: 0.5563870229912602 Coefficient of Determination: 0.299165167135485 RMSE: 0.3726470509784722 NRMSE: 0.10056674348421987 MAPE: 204.21350638833084 Pearson Correlation: 0.4042710865528474 Spearman Correlation: 0.37054966655679017 Coefficient of Determination: 0.15847032007179995 RMSE: 0.47498096362135395 NRMSE: 0.17529624910829827 MAPE: 373.8640747535528 Fold: 3 Protein: RB1 x_train_column_count: 371 x_train columns: ['TBC1D13', 'STX10', 'GPIHBP1', 'RIPPLY1', 'C1QBP', 'C16ORF70', 'DPAGT1', 'SLC25A52', 'CSRNP3', 'SMTN', 'PGM2', 'LIX1', 'GTF3C5', 'NFE2L3P2', 'LOC148413', 'FHIT', 'RNF212', 'LY6G5B', 'MRPL39', 'KLHDC4', 'CEP85L', 'PDHA2', 'GZMA', 'ANXA7', 'PHF21A', 'PDK4', 'YAE1D1', 'SLC27A4', 'CLCN6', 'CEP89', 'TSSC4', 'BTNL9', 'SOGA1', 'GABARAPL3', 'TYK2', 'C4ORF3', 'FAM186B', 'PSMA7', 'GUCY2GP', 'SNORD114-14', 'RNFT1', 'ZNF586', 'LRRC23', 'SNORD115-8', 'EIF4EBP2', 'STK17B', 'MFSD1', 'MTMR14', 'EID2B', 'FBF1', 'FAM19A2', 'BUB1B', 'SMUG1', 'GLT8D1', 'CES4A', 'MPP2', 'BMX', 'LRP1', 'GIMAP5', 'SIX2', 'ITPRIPL2', 'FLJ37201', 'FCRLA', 'SDHAP2', 'PCP4', 'RSL24D1', 'ZNF30', 'CRCP', 'MIR31HG', 'TSR1', 'PPP2R5C', 'OR52B6', 'RSAD2', 'IAH1', 'NUP205', 'CDH2', 'C8ORF74', 'AGPAT5', 'GSTM4', 'SPRR1B', 'PAPSS2', 'ARHGAP11B', 'IMPAD1', 'PIP4K2C', 'FUBP1', 'NCAN', 'OSBPL7', 'DAZAP2', 'LINC00957', 'PIWIL1', 'BRCC3', 'SNORD8', 'TMEM145', 'SLC25A32', 'DES', 'RGN', 'CENPE', 'ZNF675', 'LOC153684', 'HAUS5', 'JMJD1C-AS1', 'DUSP10', 'ZYX', 'SEPT3', 'XKRY2', 'IFI27L2', 'ZFHX3', 'COA7', 'HMGB4', 'CHCHD3', 'OR2W5', 'NCKAP5L', 'ZNF492', 'PRKACB', 'DDX46', 'ZBTB33', 'F8', 'ZNF536', 'TOP3A', 'GLTP', 'KRTAP3-2', 'MKS1', 'ALDH3A2', 'C1S', 'MIS18BP1', 'PDLIM5', 'TOM1', 'TIAF1', 'EBPL', 'ABO', 'LAGE3', 'LY75', 'ERGIC1', 'SERTM1', 'HADHB', 'DGKG', 'SPRR2E', 'ARHGAP5', 'DAGLA', 'PIGZ', 'OR10R2', 'POMGNT2', 'SIX4', 'ASCC2', 'MIR600HG', 'KIAA0907', 'KCNQ5', 'SMIM20', 'ZNF263', 'FARSA', 'NLRP5', 'TMED10P1', 'BRICD5', 'MNT', 'ATG14', 'FAM150B', 'MYRIP', 'SLC17A9', 'NOTCH2', 'C19ORF40', 'RAB11FIP2', 'AREG', 'CIRBP-AS1', 'GRN', 'CLTA', 'CBLN2', 'PCDHA1', 'NRK', 'DHRS12', 'SNORD117', 'TUBA1C', 'ADD2', 'DHX38', 'GIMAP7', 'LONRF2', 'CLTCL1', 'KCNK7', 'AGAP3', 'LRIT1', 'KTI12', 'CITED1', 'CD200R1L', 'SYNPO2', 'THY1', 'GRAPL', 'CHIA', 'KLC1', 'CDK5RAP3', 'C15ORF48', 'EID3', 'ATXN7L1', 'MAFB', 'HOXD13', 'CDC42EP4', 'VMAC', 'CHPT1', 'NPTXR', 'GPATCH2', 'VWA8', 'MDGA2', 'ZAR1', 'HS6ST2', 'ZNF766', 'CACNB1', 'GFI1', 'TINAGL1', 'NKX2-1', 'ANGPTL1', 'KHDC3L', 'KLRC4', 'KIAA0196', 'MAPKBP1', 'FAR2', 'DSPP', 'KDELC2', 'HOXA13', 'AAGAB', 'RHBDF2', 'GMPPB', 'IGFALS', 'EFNA5', 'ZNF692', 'LINC00628', 'CEACAM19', 'TPP1', 'TRIM14', 'SNORD115-39', 'FBXO43', 'ARIH1', 'USP3', 'HMGB3P1', 'MDM4', 'SULT1C2', 'ACSS2', 'NIT2', 'ANKRD30BP2', 'AZI2', 'BTBD19', 'D2HGDH', 'MIEF2', 'DRC7', 'PLBD1', 'PLK5', 'FAM210B', 'MPRIP', 'TMX1', 'LEMD3', 'ASL', 'TOP2B', 'TTC9C', 'ACSL6', 'ITFG1', 'GGT1', 'OR2D3', 'MAML3', 'TRIM29', 'OR1E2', 'STX8', 'CDC26', 'LMCD1', 'STX3', 'OR51M1', 'LINC00696', 'SPAG5', 'MAGI1', 'AP3B2', 'BBOX1', 'CPVL', 'EYS', 'TRIM3', 'EPSTI1', 'SCNM1', 'ZC3H13', 'PRCC', 'PUSL1', 'PRDM13', 'IP6K3', 'ID2', 'AZGP1', 'PLIN4', 'HDDC3', 'SNORD115-25', 'SP110', 'GLIS3-AS1', 'WDR60', 'ZG16B', 'EMB', 'PTPRE', 'LOXL1', 'NUDT16L1', 'DTHD1', 'DACH1', 'ETV1', 'NOXO1', 'TMEM39B', 'ELP2', 'HECW1', 'DPY19L1', 'TPTE2P3', 'PRKCD', 'DEFB125', 'ABCA13', 'CDC14C', 'CSF3', 'TRPC6', 'FABP5P3', 'POMZP3', 'SFXN5', 'RAD50', 'PRAM1', 'POLR2K', 'DHRSX', 'UGT1A9', 'BEAN1', 'MYOT', 'MIR503HG', 'MEIS1', 'ADCY2', 'CFDP1', 'NANOS2', 'TM9SF1', 'OR13J1', 'CERKL', 'AFP', 'GPX3', 'ZNF407', 'RIMS4', 'KIAA0226', 'RNF7', 'LINC00336', 'GPR139', 'DR1', 'DSG1', 'ZNF84', 'ZP3', 'FAM129C', 'LINC00698', 'ALKBH8', 'TCP10', 'TNC', 'RARB', 'A4GALT', 'KLHL42', 'NUP188', 'DUX4L2', 'CEP44', 'OR6V1', 'ADRBK2', 'C20ORF85', 'IFIT1B', 'EOMES', 'IRX2', 'CCSAP', 'RPGRIP1L', 'GBAP1', 'SF3B4', 'ZNF876P', 'GDNF', 'ID1', 'ZNF684', 'SLC13A2', 'PLCL2', 'MMAA', 'CHMP6', 'AMOT', 'WFIKKN2', 'SLC12A3', 'GDF10', 'PLCB1', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.8080420933064375 Spearman Correlation: 0.7707901653999791 Coefficient of Determination: 0.6529320245550496 RMSE: 0.14173230793673908 NRMSE: 0.051833055857496736 MAPE: 655.9699657464232 Pearson Correlation: -0.16613979371394824 Spearman Correlation: -0.18599982543423238 Coefficient of Determination: -11.574773020709177 RMSE: 0.7860448786341964 NRMSE: 0.5515562531640374 MAPE: 1426.3788494492321 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.17145869661426438, tolerance: 0.003113905664439024 positive)
Pearson Correlation: 0.7789918516507977 Spearman Correlation: 0.722569719122231 Coefficient of Determination: 0.606335789261621 RMSE: 0.15094702385071898 NRMSE: 0.055202978295318526 MAPE: 607.3465499745269 Pearson Correlation: -0.1843967840948485 Spearman Correlation: -0.19826431751019344 Coefficient of Determination: -6.180053028721937 RMSE: 0.5939653235119648 NRMSE: 0.4167768243905615 MAPE: 1367.6354357361306 Predictor: RandomForests Pearson Correlation: 0.5785710985321638 Spearman Correlation: 0.4223959203784099 Coefficient of Determination: 0.18422555361334247 RMSE: 0.21729345059424324 NRMSE: 0.07946659252276303 MAPE: 194.91579594857853 Pearson Correlation: 0.0673549157181666 Spearman Correlation: 0.22493297921420471 Coefficient of Determination: -0.027057991592395414 RMSE: 0.22464396105337023 NRMSE: 0.1576293985526827 MAPE: 188.61270964394419 Protein: CDH1 x_train_column_count: 836 x_train columns: ['TTC22', 'KCNH1', 'TMEM211', 'CATSPERG', 'LPA', 'MFI2', 'FLJ45079', 'LBR', 'CSMD1', 'F12', 'ENOX1', 'SLC7A14', 'ACTR3BP2', 'LIMK1', 'NDUFS6', 'SNORD115-27', 'DGCR6', 'NDUFAF2', 'GCNT4', 'SLC35F5', 'OGN', 'CLEC3B', 'DGKH', 'HOXA5', 'TTC19', 'TMEM130', 'ERMP1', 'SRRM5', 'CHRM3', 'GPR146', 'FRYL', 'TUBB2B', 'NPTX1', 'NR2F1-AS1', 'MPST', 'TTLL13P', 'PRRT2', 'OTUD6A', 'COA4', 'RPL13AP17', 'M6PR', 'TRIM37', 'SNX15', 'TTC31', 'EPHA2', 'RPS4Y1', 'BEAN1', 'CCNB1', 'TACC3', 'EIF3K', 'OR8B2', 'C4ORF33', 'OCRL', 'TRIM52', 'TBCEL', 'DTNBP1', 'TMEM135', 'WDR18', 'H2AFX', 'TMCO4', 'CCNJL', 'CYP46A1', 'CXCL16', 'PILRB', 'GPR87', 'DDX56', 'AOC4P', 'THNSL1', 'CSNK1G2', 'FAM81A', 'KLK10', 'FAM58A', 'IGDCC4', 'SPDYA', 'CC2D2A', 'NEDD4', 'EFCC1', 'ZNF768', 'DEFB114', 'SYBU', 'TLCD1', 'CKS2', 'PSMD4', 'CSRNP1', 'CYTH2', 'WDR83OS', 'CASP3', 'OR6Q1', 'ZNF595', 'MRPS34', 'MRPL23-AS1', 'ZSCAN30', 'PDLIM1', 'PSG9', 'PPP1R2', 'SGPP1', 'PWWP2A', 'MBTPS1', 'SLC50A1', 'SEPT1', 'VCX3A', 'TXNDC9', 'ATRIP', 'TSPYL5', 'ATP6V1B2', 'CNGA3', 'SAR1B', 'NUP54', 'OR2K2', 'DUX4L5', 'SNORA27', 'GFRA1', 'FDPSP2', 'RAB13', 'SEPW1', 'CA14', 'LYPD6B', 'KRTAP20-3', 'TRAM2', 'ZNF697', 'SNORD86', 'CFH', 'TCP10', 'TLE4', 'ACOT2', 'SNORD91A', 'CERKL', 'FGF6', 'CBLN1', 'CWC27', 'B3GNT2', 'CAPN10', 'NGFR', 'SUMF2', 'AFM', 'PNLDC1', 'RPS6KA1', 'SERPINB8', 'KCNE3', 'LOC256880', 'ZFP28', 'NOL4L', 'ATP9A', 'GALNT9', 'PPY', 'ADGRF4', 'DFNA5', 'ZNF283', 'USP6', 'OR10J3', 'LINC00696', 'AMBP', 'FAM65C', 'MLKL', 'WNT11', 'CARKD', 'CLRN1-AS1', 'SH3RF2', 'PCDHGC3', 'ARSJ', 'TARM1', 'MLN', 'DCAF8L2', 'EPO', 'ERICH4', 'EIF3A', 'TUFT1', 'EEF1G', 'RIMBP3C', 'KCNT1', 'ACAD10', 'CHRND', 'BCDIN3D', 'STK10', 'PHOX2B', 'AK3', 'SNAR-A4', 'AGPAT5', 'RHBDF1', 'JMJD1C', 'FGFR1', 'LINC00202-1', 'RPL34-AS1', 'RTL1', 'C2ORF66', 'ZNF136', 'KLLN', 'SAMD4A', 'MRPS36', 'SLC7A5P1', 'GPX7', 'ZNF324B', 'NFKBIA', 'DOHH', 'CSTF2T', 'MAL2', 'C1ORF95', 'FZD8', 'PRTG', 'TIFAB', 'CAMSAP2', 'C19ORF38', 'RAC3', 'SUN3', 'DICER1', 'MS4A8', 'LINC01548', 'UBAP2', 'ZNF221', 'RFX8', 'DNAH3', 'GCOM1', 'SRGAP3', 'CDC14C', 'C11ORF94', 'PSMD8', 'AOX2P', 'TEKT1', 'IL17RE', 'NANOS1', 'CUEDC1', 'GAS6', 'GAMT', 'BTN3A3', 'SNORA2A', 'CCL15', 'ADAMTS12', 'SOGA1', 'DNAH8', 'GRM1', 'OSBP2', 'KIAA1211L', 'D2HGDH', 'ZBTB17', 'SLC6A4', 'EPHX1', 'ZNF133', 'C8G', 'MACF1', 'PTK7', 'HHEX', 'RPL23AP7', 'CHMP2A', 'MATR3', 'FAM101B', 'CXORF49B', 'LYAR', 'ARPC1B', 'KRTAP12-3', 'MTF2', 'MAP3K9', 'ALOXE3', 'RBL2', 'RGS16', 'ZNF562', 'TRADD', 'CDKL4', 'SNORA37', 'FAM199X', 'ADAMTSL4', 'PML', 'CTIF', 'LPIN1', 'TBC1D9', 'SIAH2', 'CREBRF', 'MRGPRG', 'TRPC3', 'TESK2', 'LTB4R2', 'PSMD7', 'PQLC2', 'SNORD10', 'WRAP53', 'LINC00264', 'C1ORF52', 'MFSD6L', 'TMEM132B', 'DPP10', 'ZMAT4', 'PGM2L1', 'AMER3', 'OR2F1', 'ZNF295-AS1', 'RHOD', 'FUT1', 'WDR61', 'HOXD12', 'LCE1B', 'SLC2A9', 'HMBS', 'CDK9', 'PLEKHA1', 'SUGP2', 'UBA52', 'LAPTM5', 'MYH15', 'CD6', 'IL1RN', 'C10ORF10', 'CLN3', 'AANAT', 'CRELD1', 'DNTTIP2', 'CERS1', 'TREM2', 'NASP', 'CACNB3', 'GOLGA3', 'TREML4', 'CDHR1', 'HRAS', 'KHDC1', 'C17ORF49', 'PGLYRP4', 'AP2A2', 'TMEM244', 'GEMIN5', 'TAS1R1', 'FAM168A', 'ADAR', 'IRGM', 'SRPK2', 'GFRAL', 'RILPL1', 'HECTD3', 'SMIM7', 'LRRC20', 'PRKAG1', 'HIBCH', 'CST4', 'ASH1L-AS1', 'FOXO3', 'FERD3L', 'SOHLH1', 'CTBP2', 'PSMG3', 'PEAK1', 'FAM111A', 'IGFL1', 'BARX1', 'EYA4', 'ARFGEF2', 'TNFSF18', 'RAC2', 'ZNF45', 'PSME4', 'CMTM6', 'ARID4A', 'PAX8', 'WNT2', 'RASGRP3', 'SLITRK6', 'LY86-AS1', 'HDAC7', 'C20ORF173', 'KRTAP10-6', 'APBA1', 'DEFB134', 'SMC4', 'PODXL2', 'TRIM17', 'ACOXL', 'TTC14', 'FCRL2', 'DUSP22', 'SLC25A31', 'TXNIP', 'GALNTL6', 'ROS1', 'MYH6', 'SYTL4', 'SNORD12B', 'VPS37B', 'NDUFAF6', 'ARRB2', 'GABARAP', 'POU2F2', 'KIF21A', 'IMPDH2', 'XKR6', 'CCDC88B', 'OR10A6', 'STX7', 'TAF1L', 'ENOSF1', 'PC', 'SPATA20', 'UBA2', 'PAX5', 'CS', 'ZNF525', 'MYOF', 'APBB1', 'CUL4B', 'ADCY5', 'GGH', 'CHD1', 'GRIA1', 'NFKBID', 'GUCA1A', 'GOLGA6L6', 'LINC00926', 'SP140L', 'NKX2-5', 'TSSC4', 'RRNAD1', 'GTF2H2', 'OR7A5', 'XPOT', 'DLGAP4', 'POLG', 'SLC25A13', 'RNF216', 'TIMM13', 'STIM2', 'LRRC15', 'C14ORF39', 'PDCD4-AS1', 'HIST1H3E', 'PPP1R16A', 'DNMBP-AS1', 'MARCKSL1', 'PPP1R12C', 'KRTAP23-1', 'UGT1A1', 'ZNF419', 'TJP2', 'IL34', 'EVI2A', 'CCL3L3', 'AGO2', 'SHISA4', 'STS', 'MGRN1', 'EFNA4', 'PLEKHM1', 'MARCH2', 'OR51G1', 'FUT9', 'NDST2', 'TMEM98', 'ABHD5', 'PARP15', 'P2RX1', 'LMX1B', 'ING3', 'TEAD3', 'EHD4', 'C11ORF95', 'SEC61A1', 'MYC', 'HLA-DRB1', 'ADCY3', 'NAT8B', 'PSEN2', 'TMEM54', 'GJC1', 'NDUFA5', 'LOC100288778', 'NRAS', 'ZNF28', 'RIMBP2', 'FAM107B', 'GPR18', 'MOGS', 'TUBA1A', 'HAPLN4', 'ARX', 'CHRNA2', 'GPKOW', 'TTLL3', 'SCARA5', 'C1ORF123', 'ILK', 'GCNT7', 'PTPRR', 'DAD1', 'NPBWR2', 'INA', 'STAG2', 'ZNF281', 'PI4KA', 'FRAT2', 'GPR135', 'DKFZP434L187', 'SLC7A11', 'RBFOX3', 'REG3A', 'FNBP1', 'STXBP6', 'TIMM22', 'SNX14', 'HIST2H2BF', 'SLC38A7', 'PIK3C2A', 'CENPT', 'AFAP1L2', 'ABTB2', 'NOP9', 'C11ORF70', 'TMEM256', 'SORD', 'CAPN9', 'ASPDH', 'EPS8L3', 'ISYNA1', 'CELF3', 'CYP4F3', 'METTL21A', 'LYSMD4', 'OR6Y1', 'LMNB1', 'P2RX7', 'CCL26', 'CTXN2', 'PRDM16', 'MPPED2', 'AQP7P1', 'TMEM95', 'UGGT2', 'SNX12', 'KATNBL1', 'STX3', 'METTL12', 'AP2B1', 'ALDOB', 'GMPPA', 'GRIA4', 'C1ORF228', 'CYFIP1', 'MFGE8', 'EIF4ENIF1', 'SYMPK', 'FTSJ1', 'LRRC19', 'BGLAP', 'PPFIBP1', 'CCDC134', 'RAMP3', 'MTG1', 'GUCA1B', 'HEBP2', 'MPDZ', 'ZBTB20', 'C3ORF58', 'RPTN', 'VPS4A', 'TMCO1', 'SNX22', 'DPEP2', 'C7ORF43', 'APMAP', 'HLF', 'RUVBL2', 'HNRNPA2B1', 'RBP7', 'CASZ1', 'KRTAP2-1', 'GGA2', 'CCR1', 'ASB4', 'RCC2', 'AGPAT1', 'RBM15B', 'SQSTM1', 'LPO', 'HK1', 'FAM222A', 'ALDH2', 'NPNT', 'COG4', 'FRMD7', 'ULK4P2', 'CDC23', 'APOC2', 'PRG2', 'ZSCAN12', 'KLHL24', 'FLOT1', 'FAM180B', 'COA3', 'DNAJC30', 'LRRC58', 'PMF1', 'ZNF343', 'KLHL36', 'COQ2', 'HSPE1', 'SLC48A1', 'SLC22A23', 'PACS2', 'LPAR5', 'IFI30', 'SERTAD3', 'CPS1', 'SNORD15B', 'MGMT', 'LINC00161', 'ACY1', 'TPTE2P6', 'FLG2', 'SEC24B', 'MARC1', 'OR5AP2', 'ADIPOR1', 'ATF6B', 'PCDHA13', 'LIPE', 'MYH10', 'OR1J2', 'COL6A5', 'EXOSC7', 'ETFB', 'YARS2', 'TAOK3', 'EXOC3-AS1', 'ACTR1B', 'SUPT7L', 'MRPL43', 'ZNF513', 'UBE2Q1', 'PRKAB1', 'NAIF1', 'HERC3', 'PMEL', 'GPR180', 'DALRD3', 'LY86', 'STARD10', 'CYTH4', 'LOC115110', 'ELK4', 'SORT1', 'NINL', 'CEP170P1', 'KCNN4', 'AP1M2', 'NT5DC1', 'FOXL2NB', 'LINC00623', 'POLR3A', 'TICAM2', 'CECR5', 'SELM', 'MLH1', 'DPH5', 'C6ORF10', 'PART1', 'CYB561', 'DYNC1I1', 'OR5A1', 'SNORD116-20', 'ZDHHC8P1', 'ZNF493', 'WNT1', 'CCNT2', 'ANO1', 'RBM25', 'ZC4H2', 'ZNF879', 'SARDH', 'LINC00661', 'GPR149', 'PRAMEF10', 'ZNF296', 'ZCCHC24', 'MTHFSD', 'GPATCH3', 'ALG1L', 'TXLNB', 'USP9X', 'KPNA5', 'FAM195B', 'TBX4', 'OR10J1', 'SLC47A1', 'TLK1', 'ARHGDIA', 'RNF113A', 'DOCK1', 'XKRY2', 'ZNF737', 'WDR37', 'WDR81', 'TECTA', 'RWDD2B', 'GYS2', 'PPP1R32', 'GDF11', 'GRB14', 'U2AF1L4', 'VPS41', 'CAPN12', 'DENND6B', 'RFTN2', 'SNORD115-7', 'C6ORF47', 'CCDC126', 'TOMM70A', 'PDZK1IP1', 'PCDH19', 'CHST6', 'NAA15', 'HR', 'PDDC1', 'FAM216A', 'DCBLD1', 'NUTM2F', 'BDKRB1', 'AGGF1', 'ARSE', 'REEP1', 'FAM26E', 'LRIG3', 'BTG2', 'CCDC116', 'CEP170', 'C1GALT1', 'HSFY2', 'TMOD2', 'GSG1', 'HIF3A', 'SNRNP70', 'HIST2H2AC', 'FGF1', 'ETNPPL', 'IPCEF1', 'C17ORF62', 'DCAF16', 'LRRFIP1', 'SLC35F1', 'OR2V2', 'IFNGR2', 'OGG1', 'AFAP1L1', 'RBM39', 'CCNI2', 'OR5C1', 'ALKBH1', 'PNMA3', 'CEP126', 'PCDHGA5', 'NPTX2', 'PROP1', 'PCDHA11', 'GRIK1-AS1', 'IFNA17', 'RMDN3', 'CENPI', 'ZMAT5', 'PPP3CA', 'RRBP1', 'SGCB', 'ZBTB41', 'PYGL', 'MS4A12', 'LIME1', 'PKD1L2', 'GTF3C4', 'CTDP1', 'LINC00092', 'TSG101', 'FMO5', 'FCHO1', 'LOXL3', 'OLMALINC', 'CNNM2', 'PUF60', 'XK', 'IL2RA', 'ZMAT2', 'C16ORF92', 'POLR3B', 'PSAT1', 'CDKN1C', 'NUDT16P1', 'GAS5', 'AIDA', 'KRTAP19-4', 'LOC100132287', 'TBC1D2B', 'CD46', 'TMEM18', 'GHSR', 'RGS8', 'AGL', 'PEMT', 'PPCDC', 'PVRL3', 'KCNK10', 'HNRNPDL', 'APP', 'FBXO28', 'TMEM194A', 'CCDC58', 'TTC36', 'ZDHHC11', 'GRHL2', 'ZNF831', 'TMEM99', 'SQLE', 'GALE', 'SERP1', 'CBX2', 'RTN4', 'GUSB', 'ELMO2', 'USP8', 'SNORD11', 'HAUS2', 'PLA2G2F', 'INS', 'GRIK4', 'SYT12', 'KLRC4', 'SYCP1', 'MUC13', 'LAMB3', 'ZNF836', 'PXDC1', 'AP3M1', 'SSTR2', 'TRIM27', 'ARRDC4', 'GLRA3', 'SCUBE3', 'SLC25A32', 'XKRY', 'TMEM97', 'SNORD60', 'TK1', 'TEX35', 'KRI1', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.1058531340039115e-14 NRMSE: 3.353162533046577e-15 MAPE: 1.4972712241337233e-11 Pearson Correlation: 0.17994865642334054 Spearman Correlation: 0.1565829997880273 Coefficient of Determination: -7.796690128099241 RMSE: 2.792533327236554 NRMSE: 0.5489980197453218 MAPE: 1810.9061606670848 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 2.301960263687724, tolerance: 0.07424076431120771 positive)
Pearson Correlation: 0.9998964177539454 Spearman Correlation: 0.9997316728077399 Coefficient of Determination: 0.9997821793210132 RMSE: 0.01733722690142084 NRMSE: 0.002760617002869469 MAPE: 15.926845938721815 Pearson Correlation: 0.17577078757252507 Spearman Correlation: 0.15641840920709735 Coefficient of Determination: -5.646675508278239 RMSE: 2.427397813733132 NRMSE: 0.4772142125846601 MAPE: 1317.9469511462544 Predictor: RandomForests Pearson Correlation: 0.7600930091276052 Spearman Correlation: 0.7183703042033197 Coefficient of Determination: 0.572676245674925 RMSE: 0.767906947795529 NRMSE: 0.12227428231513789 MAPE: 199.01403866175585 Pearson Correlation: 0.7410780295804471 Spearman Correlation: 0.4846469407349219 Coefficient of Determination: 0.5404897653167995 RMSE: 0.6382433704572165 NRMSE: 0.12547543947965567 MAPE: 134.44031301881722 Protein: CDH2 x_train_column_count: 474 x_train columns: ['PWRN2', 'PHLDB3', 'ISCA1P1', 'SORL1', 'HMGXB3', 'B4GALT7', 'ZUFSP', 'IFITM5', 'CACFD1', 'WDFY3', 'TRRAP', 'IKZF2', 'PTPRA', 'LRRC16B', 'FRZB', 'HRK', 'DUOX1', 'CENPF', 'FAM175A', 'ARMCX6', 'SBF1', 'CD164', 'CAPS', 'ACAD9', 'SEC14L4', 'CRX', 'FOXP4', 'PIGB', 'GBA2', 'CST9', 'TRAF6', 'CXCL9', 'PAGE3', 'UTP20', 'TMEM9', 'MROH2B', 'SNORD115-3', 'HIST1H3A', 'OR5J2', 'ZAR1', 'RBPMS', 'PLD1', 'PHKA2', 'BAALC', 'EDN3', 'LAMA1', 'CADM1', 'RPF2', 'CSF1R', 'TM4SF5', 'HNRNPA3P1', 'OR13J1', 'IL5', 'LOC613037', 'FGFRL1', 'RBFOX2', 'ZC3H14', 'B3GALNT1', 'CLIP3', 'ANKRD23', 'SORCS1', 'SNORD35A', 'CASC3', 'AKR1C4', 'AKIRIN2', 'STEAP2', 'ZBTB44', 'ARPP19', 'DHRS9', 'CYSLTR2', 'UROC1', 'SARNP', 'ITPR3', 'CMTM3', 'PLA1A', 'FAM175B', 'C8G', 'PROKR2', 'ARHGAP17', 'C3ORF36', 'MYADM', 'FAM47A', 'PHAX', 'ANXA4', 'PDE2A', 'LINC01020', 'SGK223', 'FZD3', 'POFUT2', 'SNORD17', 'LINC00628', 'CLK2P1', 'NANP', 'BUB1', 'CASR', 'ZNF519', 'SLC23A3', 'ZDHHC11', 'GREB1', 'SLC6A20', 'SPATA2', 'HIST2H4A', 'PPP2R5B', 'DYNC2LI1', 'PLXNB2', 'HBD', 'CLDN23', 'ZBTB1', 'PPP6R2', 'UGT1A1', 'DCDC1', 'SP7', 'ARMC1', 'RNF220', 'C6ORF106', 'GMNN', 'OR2T10', 'CTR9', 'SYT9', 'MGC16275', 'CRYAA', 'CCL15', 'ELOVL7', 'RPL8', 'OXCT2', 'CRYZ', 'MFSD10', 'BEX4', 'OR10C1', 'NFE2L3P2', 'LOC728392', 'SV2A', 'PRDM6', 'IRX4', 'SLC2A6', 'ZNF444', 'GNRHR', 'MORC4', 'TUBB1', 'CREB1', 'C11ORF95', 'THEMIS2', 'LINC00882', 'DKFZP434L192', 'TUT1', 'ACSS2', 'TMEM256', 'MAGEB6', 'ZNF599', 'MYLK4', 'SYCE2', 'EOGT', 'LIF', 'SLC35G5', 'NDOR1', 'AKAP5', 'KIAA0930', 'SCUBE3', 'PRRC1', 'PCF11', 'HOXA11', 'LOC391322', 'GABARAPL1', 'CKLF', 'RNF138', 'SDK2', 'CYP2S1', 'C9ORF69', 'UCA1', 'GGT8P', 'CHPF2', 'THNSL2', 'FLRT3', 'RRAGB', 'IKZF5', 'KLHL5', 'C1ORF122', 'RPS7', 'XRCC2', 'GLUD2', 'KLLN', 'MOG', 'FAM150A', 'CCDC7', 'SNORD94', 'EFNA4', 'OR1E2', 'LYNX1', 'LINC00894', 'RFTN1', 'VWDE', 'FBXO2', 'TEX37', 'RNASE13', 'KPNA1', 'ZFYVE16', 'KLHL22', 'UCK1', 'ALDH7A1', 'ANO1', 'IRF4', 'ERCC6', 'MUCL1', 'PIM1', 'LETM2', 'ZNF93', 'MAN1C1', 'VPS37A', 'PRSS21', 'RNF166', 'FNTB', 'ABCA4', 'GDPD1', 'GMCL1P1', 'HIST1H2BN', 'AHCTF1', 'TSPYL4', 'RPLP0P2', 'ZNF837', 'RGS10', 'ITGAV', 'TMPRSS3', 'PAM', 'CENPN', 'THG1L', 'KCNQ2', 'COL3A1', 'WFDC6', 'ARMCX1', 'EHHADH', 'SLC25A45', 'CYP4F12', 'HBS1L', 'BANP', 'ATP13A5', 'ZNF71', 'CLEC19A', 'TTTY14', 'PHRF1', 'CUTC', 'FAM170B', 'HPVC1', 'SNORA11C', 'MMP2', 'NMU', 'ZNF576', 'SUSD6', 'IL22RA1', 'COL4A4', 'PHF1', 'DEFB1', 'TMEM105', 'SOHLH2', 'LOC100270804', 'FITM2', 'RPS6KC1', 'CSN1S1', 'FAM71F1', 'SNAR-C2', 'MYO18B', 'MYT1L', 'NINJ1', 'MESP2', 'TMEM254-AS1', 'ST6GAL1', 'FAM57B', 'MRM1', 'UBAP2', 'NEURL3', 'C12ORF50', 'PRR22', 'CAST', 'CXCL10', 'PREX1', 'LRRC8A', 'DIO1', 'DDB1', 'IL5RA', 'TRPM6', 'TSPAN14', 'SNORD96A', 'EP300', 'SNORD4A', 'GNGT1', 'NDUFAF7', 'GPRC5B', 'OR13C9', 'DNASE1L2', 'CHSY3', 'KRBOX4', 'SAMD9L', 'CAPN2', 'RYR1', 'LAMA4', 'MGC15885', 'GLYAT', 'OCIAD2', 'TRDN', 'GPR4', 'CCDC113', 'CYP26C1', 'HAPLN4', 'TTLL12', 'ZBTB40', 'B3GNT7', 'APOA4', 'DDX27', 'AGPAT6', 'TRMT10A', 'SMC3', 'BCAP31', 'MAGEC1', 'KIAA1217', 'UXT-AS1', 'LRRC61', 'PPM1G', 'RAD54L2', 'LIPE', 'DUSP11', 'PPP1R26', 'ARPC5L', 'MPP6', 'IGSF11', 'TRIM58', 'RAF1', 'SUSD3', 'TPH2', 'BMX', 'HAUS3', 'ABCB10', 'ABHD8', 'SNORD27', 'CGNL1', 'C1QL4', 'HOXB2', 'DNASE1', 'TBX4', 'TRIM50', 'DPP3', 'SLC6A15', 'ARHGAP4', 'PTBP1', 'POTED', 'MAP3K9', 'HSF1', 'EMC1', 'TSPO2', 'OR5B3', 'NUDCD3', 'RRM2', 'PDSS2', 'WFDC11', 'TUBB7P', 'C10ORF32', 'RPL32P3', 'TUBGCP5', 'PRY2', 'TMEM133', 'EXOC6B', 'SARDH', 'ACTA1', 'LOC285627', 'VWA2', 'RPE', 'HEATR6', 'ZFP36L2', 'DUSP23', 'ELMO2', 'DTHD1', 'PEX5L', 'IRX2', 'STMN3', 'ECT2L', 'MSL1', 'UHRF2', 'RPL14', 'SLC17A4', 'EPHX1', 'CRISPLD1', 'SLURP1', 'LSM2', 'HDAC11', 'CACNB2', 'CRMP1', 'KIF20B', 'UBE4A', 'POU2AF1', 'GALNT11', 'SPRED2', 'SARS2', 'PANK3', 'RGPD8', 'PNN', 'STARD7', 'SF3B2', 'ENTHD2', 'CLEC4M', 'NSFL1C', 'ZBTB25', 'ACAD10', 'DHRS12', 'HM13', 'LAMB2P1', 'MOV10L1', 'TMEM167A', 'ADCY6', 'PACSIN1', 'DIRC1', 'PAQR3', 'PTPRC', 'WNT5B', 'KCTD9', 'PNMAL1', 'CYP4A11', 'SEC1P', 'ZNF606', 'KCNA10', 'LGMN', 'CA13', 'BRD7', 'WTIP', 'TTTY15', 'GOPC', 'NOTO', 'LOC392196', 'HBZ', 'NEDD8', 'SCARB1', 'CTDNEP1', 'PHF10', 'HDHD3', 'ANKRD20A9P', 'TIMM17B', 'DDAH2', 'SPAG5', 'TMPPE', 'CCNI', 'GLYR1', 'OR4D6', 'ADGB', 'RAD23A', 'FBXO5', 'PSMB7', 'FGF2', 'ADAM7', 'ADRBK1', 'TRUB1', 'ZMYM2', 'PKIG', 'PPP1R12B', 'HEXDC', 'ABHD2', 'RAMP2', 'HLA-DMA', 'OR8K1', 'SART1', 'ERH', 'KRT6A', 'MFSD6L', 'KIAA1467', 'EDNRA', 'DOCK4', 'STAMBP', 'C4BPA', 'STRC', 'PIWIL2', 'RHOJ', 'WRB', 'TNRC6C', 'DHX33', 'LMO3', 'GIMAP5', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.9463574174805193 Spearman Correlation: 0.9305404365703628 Coefficient of Determination: 0.8955923616203978 RMSE: 0.12318626308457387 NRMSE: 0.04463593850444738 MAPE: 1235.3243444791242 Pearson Correlation: -0.020567879398209706 Spearman Correlation: -0.01589296624646193 Coefficient of Determination: -11.978016008300852 RMSE: 1.1959527739772944 NRMSE: 0.6301519453165082 MAPE: 15412.47036012997 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 8.389615291901968, tolerance: 0.007819420435861616 positive)
Pearson Correlation: 0.9100703138536914 Spearman Correlation: 0.8894443762024449 Coefficient of Determination: 0.827591702458454 RMSE: 0.1582979265568634 NRMSE: 0.05735847762767715 MAPE: 1689.003314346174 Pearson Correlation: -0.010522668814230808 Spearman Correlation: -0.032411875459793765 Coefficient of Determination: -5.570274423983779 RMSE: 0.8509452774452273 NRMSE: 0.44836621780366903 MAPE: 1325.468399693127 Predictor: RandomForests Pearson Correlation: 0.5511209992348323 Spearman Correlation: 0.5149307288898085 Coefficient of Determination: 0.19481746181874338 RMSE: 0.34209231546234875 NRMSE: 0.12395547339022711 MAPE: 451.8768596104497 Pearson Correlation: -0.05553049311526365 Spearman Correlation: -0.038716193468746496 Coefficient of Determination: -0.0742116640398729 RMSE: 0.3440763397507873 NRMSE: 0.18129509755663548 MAPE: 2496.170718677829 Protein: CDH3 x_train_column_count: 75 x_train columns: ['GPR88', 'FUT9', 'NDUFB2-AS1', 'KLHL9', 'PSMA7', 'SERPINA3', 'RBM4', 'ENPP6', 'ETV6', 'CSK', 'ANKRD17', 'GALNT12', 'UBR4', 'COL13A1', 'ARHGAP30', 'CRP', 'ZNF425', 'RPS27A', 'TISP43', 'HOXB2', 'RAPGEF5', 'MNAT1', 'DHRS4-AS1', 'SLC25A21', 'SFXN3', 'SLC5A12', 'FAM95B1', 'EPHA2', 'AGAP3', 'CCDC36', 'HKDC1', 'HIST2H3C', 'XKR8', 'C12ORF50', 'SERP1', 'STARD13', 'CCSER1', 'OCEL1', 'TSPAN6', 'KIAA0319', 'FAM92B', 'RPL37', 'TOP3A', 'PIAS2', 'KRTAP10-2', 'BRAF', 'LEAP2', 'SAMSN1', 'COL6A6', 'ANP32B', 'PPP3R1', 'SNORD15A', 'ZNF510', 'THEM4', 'VTRNA1-3', 'CPA6', 'SNORD115-3', 'MND1', 'MAN1A2', 'SNORD19B', 'EGFL7', 'DDX21', 'FOXA1', 'MRPL30', 'SPATA31D1', 'SERTM1', 'UOX', 'HIST1H2BJ', 'CALB1', 'TCIRG1', 'COL8A1', 'LOC401010', 'C10ORF35', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.5799449522437305 Spearman Correlation: 0.5866831880799843 Coefficient of Determination: 0.33633614763298303 RMSE: 0.17312304825558145 NRMSE: 0.12145917400206366 MAPE: 724.7091686152023 Pearson Correlation: 0.12240811379993047 Spearman Correlation: 0.1646180126934251 Coefficient of Determination: -0.24527166326304073 RMSE: 0.21015879610492536 NRMSE: 0.18279923465422718 MAPE: 291.3877621335748 Predictor: ElasticNet Pearson Correlation: 0.5726945075714086 Spearman Correlation: 0.5768860089909644 Coefficient of Determination: 0.32794650850465756 RMSE: 0.17421387041112196 NRMSE: 0.12222446989611184 MAPE: 688.5345499625902 Pearson Correlation: 0.15960542357285473 Spearman Correlation: 0.20033416875522142 Coefficient of Determination: -0.19053363554156255 RMSE: 0.2054879473888819 NRMSE: 0.17873646123573017 MAPE: 296.9144726240324 Predictor: RandomForests Pearson Correlation: 0.5716869824655069 Spearman Correlation: 0.5808510129611786 Coefficient of Determination: 0.28172732079429474 RMSE: 0.18010488080433765 NRMSE: 0.1263574681514408 MAPE: 486.03838317714576 Pearson Correlation: 0.29584527231592145 Spearman Correlation: 0.2824951464423778 Coefficient of Determination: 0.07642461204451367 RMSE: 0.1809887975244826 NRMSE: 0.15742673769384485 MAPE: 214.71295453952538 Protein: PTEN x_train_column_count: 886 x_train columns: ['MRPL19', 'ZNF696', 'AOX2P', 'ADGRG4', 'CDR2', 'FAM78A', 'FAM200A', 'KIN', 'BAP1', 'RC3H1', 'SPAG8', 'HDAC10', 'MICAL1', 'OR2F2', 'RPS4X', 'PDZK1', 'FGF3', 'KCNAB1', 'G0S2', 'ST3GAL2', 'FBXO7', 'GOLGA2P10', 'SNHG8', 'KRTAP21-2', 'ENDOG', 'HEMGN', 'UGT1A4', 'KCNMB3', 'IFNA21', 'BRD1', 'RFPL2', 'GGNBP2', 'WDR90', 'SNORD110', 'CDH23', 'DOCK11', 'ATP13A1', 'AFM', 'AGRN', 'SERAC1', 'PAX9', 'ZNF57', 'KRT74', 'KCNS1', 'PAIP2B', 'FUK', 'UBE2J1', 'ACSF2', 'CHMP4B', 'OR5R1', 'RTL1', 'FAM45A', 'C10ORF76', 'ZIC1', 'SNAI3', 'CAMKMT', 'MAG', 'ZNF467', 'HECTD3', 'MAT2A', 'SWT1', 'PIDD1', 'GUCY1B3', 'TREM2', 'NACAD', 'PTGER4P2-CDK2AP2P2', 'HAUS8', 'ZC3H10', 'SLC9C2', 'NR2E1', 'PLSCR2', 'CLVS1', 'UBB', 'SNAR-A3', 'CREBBP', 'SRP68', 'ADGRA2', 'CD109', 'FAM155B', 'CUL7', 'ATAD3A', 'MGMT', 'MAGEB10', 'HPCA', 'ALS2CR12', 'SAR1B', 'CRYBA1', 'ZNF692', 'ENOX2', 'ABCC3', 'TCEAL4', 'TMEM260', 'LRRD1', 'NHSL2', 'KLHL17', 'SLC17A9', 'LIN9', 'ABCF1', 'PAX4', 'ACE', 'GSPT2', 'SPDYE7P', 'SLC41A1', 'SCAND1', 'SNX11', 'SNORA19', 'GEMIN7', 'MRPL48', 'DMTN', 'MYO1G', 'FOXB2', 'GRXCR1', 'OR5AP2', 'TGM6', 'BAG3', 'TRIML2', 'FLJ23867', 'ZC4H2', 'PLGLB2', 'HERC4', 'RAB3B', 'R3HDM2', 'CECR5-AS1', 'DRD2', 'DNAJB3', 'LINC00158', 'SYNPO2L', 'COBL', 'BCL11B', 'CHD4', 'NEDD4L', 'RRN3P3', 'PDE4D', 'SLC51A', 'MALSU1', 'DHX16', 'LIG4', 'KRTAP5-4', 'KIAA0355', 'EIF1B', 'TBC1D17', 'SALL2', 'MRGPRG', 'LOC90768', 'PUS7', 'TFAP2E', 'PADI3', 'ZNF71', 'KRT15', 'FBLL1', 'OR2M3', 'VAMP3', 'TTTY5', 'IGIP', 'DAND5', 'RAB3A', 'ZNF625', 'CCDC91', 'ZNF766', 'RHPN1', 'ZBTB44', 'MROH9', 'GRIP2', 'KRT33A', 'ANPEP', 'NRSN1', 'TNS2', 'USP34', 'PSG1', 'FKBP9P1', 'ATP11C', 'LOC388955', 'KANSL1', 'DDX11', 'FAM89A', 'SNORA77', 'BTN3A2', 'KCNMB4', 'ODC1', 'PEX26', 'MSMP', 'KATNA1', 'SUPT5H', 'OGFOD3', 'HIGD2B', 'INIP', 'ARPC5L', 'BET1L', 'GABRG3', 'STX5', 'OR4N3P', 'MPP6', 'CDC25C', 'KRTAP23-1', 'SNORD114-22', 'PPFIBP1', 'CEP295', 'OR51A4', 'SNORA59B', 'FAM124B', 'SHARPIN', 'DUPD1', 'CNFN', 'SGK494', 'SNORD20', 'STAM2', 'MRPS11', 'PCSK4', 'PECR', 'FUCA2', 'SIGLECL1', 'C17ORF89', 'UTP15', 'STRADA', 'ANKRD7', 'TTTY2', 'BIRC5', 'MUC2', 'TRAP1', 'DNM2', 'CD14', 'ZFYVE26', 'PLCXD3', 'LRRTM1', 'MST1R', 'HSD17B6', 'TERT', 'NFIA', 'ARMCX6', 'GABRA6', 'C9ORF16', 'SPANXN1', 'OR8D1', 'FBXO34', 'PZP', 'TIAF1', 'IRX3', 'C4ORF36', 'ZNF843', 'NUMB', 'FDPSP2', 'PFN3', 'TSPAN1', 'RAB4A', 'EIF1AX', 'NFKBIE', 'GNAL', 'TRIM72', 'POU2AF1', 'NOMO1', 'PKD1L1', 'ORC3', 'FGF9', 'PGRMC1', 'PTPN11', 'LVRN', 'C1QB', 'CBFA2T2', 'ERVFRD-1', 'POGZ', 'DOK5', 'XPO5', 'GNA13', 'ATP6AP1', 'IQCF3', 'JAK3', 'MT1DP', 'RAB8A', 'BCAR3', 'ALG11', 'ABCC12', 'BLOC1S4', 'CDC20', 'SLC35D2', 'ARMC2', 'OPA1', 'PLEKHJ1', 'ELMOD3', 'SNORD115-38', 'KCTD9', 'ZNF470', 'RNF166', 'GMNC', 'UNC119B', 'TIFA', 'MUC20', 'TMED8', 'HMGB3', 'TMEM169', 'LSM6', 'FFAR3', 'KRT37', 'ANKRD12', 'HSDL2', 'C2CD5', 'DESI2', 'KLK12', 'SOD1', 'PARVA', 'NDC80', 'SGPP1', 'GNPDA2', 'YBEY', 'GSDMA', 'CTSL3P', 'CLDN10', 'ZDHHC5', 'OR6K6', 'PNLDC1', 'WRNIP1', 'RCN3', 'SPATC1', 'RPL31', 'KCND1', 'CASP7', 'COL9A1', 'FABP12', 'CD84', 'METTL9', 'A1BG-AS1', 'SRPX', 'FBXO6', 'PROSER1', 'ATM', 'MC4R', 'CDCP2', 'ETV1', 'IL16', 'PDCL', 'PLEKHG4B', 'STYXL1', 'TMEM184C', 'FAM131B', 'ARSB', 'BST2', 'PNMAL2', 'RIMS2', 'LCA5L', 'SNORD22', 'C1ORF159', 'EME1', 'LZTS3', 'XPOT', 'OSBPL9', 'CTNNB1', 'APOL5', 'ACTN1', 'PPP2R5D', 'SNORD114-25', 'MUC16', 'SNORD50A', 'VTI1B', 'PRRT2', 'ZBTB22', 'LMNB1', 'FOXJ3', 'FKBP4', 'CALML3', 'MMP1', 'CLPP', 'KIAA0930', 'GGA1', 'TBC1D15', 'KIF1B', 'ADGRA1', 'SNORA30', 'EHD3', 'SERTAD1', 'ALPI', 'CHCHD4', 'TOMM7', 'DDB1', 'RNF40', 'PSMG1', 'SNORA47', 'SEC24C', 'ALDH1B1', 'NSUN4', 'SGPL1', 'CPNE7', 'PLA2G1B', 'LOC100240735', 'C5AR2', 'GPR176', 'C1ORF229', 'GARNL3', 'SPOP', 'LRRC16A', 'IL31RA', 'RTBDN', 'CXCL14', 'MDC1', 'ADGRL2', 'FEZ1', 'CAMKK1', 'NDUFS4', 'PHLDA3', 'LY6D', 'GLS2', 'SCN11A', 'CTNNA1', 'RGS2', 'MAP1A', 'RAPGEF3', 'CFHR2', 'LRRC4', 'ATP10B', 'RPS19', 'SLC25A37', 'LCMT2', 'CLDN14', 'FEM1B', 'SMC4', 'CSDC2', 'YIPF4', 'SLPI', 'ZNF833P', 'DIRC1', 'TP53I11', 'C5ORF58', 'PRSS1', 'BOD1L1', 'SF3B4', 'C2CD4D', 'LOC646471', 'CDS2', 'MRPS16', 'CCDC176', 'FAM160A1', 'IMPAD1', 'GNAI2', 'DHRS7B', 'PIGC', 'NCOA2', 'DTX3', 'ZFYVE28', 'NOL3', 'CDC42SE1', 'CA5BP1', 'SPG11', 'DEC1', 'CST7', 'KLHL38', 'TENM1', 'PLCB4', 'CACNA1G', 'MARCH2', 'ERC1', 'PRSS12', 'VPRBP', 'ANKMY2', 'POM121L9P', 'FAM196B', 'WNT8B', 'GOLPH3', 'KIR2DS4', 'GTF3C6', 'ZKSCAN8', 'LAMTOR4', 'KIFC3', 'ADAMTS4', 'BHMT2', 'SNORD9', 'ZCCHC8', 'ABCB1', 'GCNT2', 'ADAM33', 'GNG5', 'SNORD43', 'IKBKB', 'HIST1H2BM', 'DCUN1D2', 'MESTIT1', 'VWA1', 'CRIP2', 'PPP1R1C', 'IGLL1', 'TIE1', 'TMA7', 'MTERF3', 'ISCA2', 'NUCB2', 'IL7R', 'PPP2R3C', 'GOLGA8CP', 'CTTN', 'CRTC3', 'ZFAND3', 'CXCL10', 'SHMT2', 'PARD6A', 'OSBPL7', 'PDCD5', 'NBPF3', 'CDKN2D', 'CWH43', 'KIF27', 'LONRF3', 'C9ORF3', 'SLC35G2', 'RPS27A', 'RMDN3', 'SCARNA10', 'VBP1', 'ARRB1', 'NAP1L6', 'RNF115', 'DDX25', 'GPR89A', 'SLC25A26', 'MAP3K6', 'CD82', 'SCARNA23', 'GRPEL2', 'RPL29P2', 'SMR3B', 'DHRSX', 'KRTAP5-2', 'RGS17', 'TSPAN9', 'AHNAK', 'EXOC5', 'DGAT2', 'OLFML2B', 'COG4', 'ANK3', 'RSPO4', 'REM1', 'COX6B2', 'LAG3', 'KDELR2', 'NIPBL', 'PNRC2', 'NUMBL', 'GOT1L1', 'PLIN4', 'EMID1', 'ADAL', 'SPPL2A', 'TMBIM1', 'RAB1A', 'CCDC101', 'GLT6D1', 'HSP90AA1', 'INHBA', 'PCNAP1', 'GSPT1', 'PSAT1', 'NUP210', 'PMS2P1', 'CTXN1', 'DHFRL1', 'CACNA1F', 'N6AMT1', 'PVRL1', 'ARPC1A', 'ADGRG5', 'NGFR', 'SSBP1', 'ZBED1', 'C5ORF51', 'FAM212A', 'FZD6', 'ZNF208', 'PHLDA2', 'LIMK2', 'ALX1', 'RNASE4', 'ARHGAP24', 'C2ORF71', 'FBXO46', 'G6PC2', 'ASMTL-AS1', 'DPY19L2P4', 'DEFB116', 'STAG3L1', 'CCDC154', 'C14ORF169', 'BRICD5', 'OR52A1', 'SNORD116-15', 'UNC5A', 'VHLL', 'PANX2', 'ANGPT2', 'CORO2B', 'SPRR2G', 'LRP5', 'ZNF567', 'C9ORF139', 'DIRC2', 'GTF2IRD1', 'ELN', 'FCGR1A', 'TMEM100', 'HRK', 'PRSS48', 'CR2', 'PRSS8', 'S100PBP', 'DAPL1', 'CSTB', 'NANOS3', 'PALM', 'TEP1', 'MEX3B', 'MLST8', 'BDH2', 'MTX1', 'CD36', 'TINAG', 'PQLC2', 'MAOB', 'MAGEE1', 'ACTRT1', 'RGL4', 'LRRK1', 'PCDH20', 'SNORA41', 'KIAA0232', 'INO80B', 'ZBTB46', 'CIDECP', 'AMER1', 'SNORD116-25', 'HORMAD1', 'ZNF69', 'THEMIS2', 'PRSS37', 'C3ORF30', 'CHPT1', 'ZADH2', 'NME1-NME2', 'CLEC18C', 'CCDC103', 'SMIM5', 'OR6W1P', 'CLEC2B', 'TELO2', 'IRF6', 'HIST2H3D', 'RNF139', 'ENAH', 'C11ORF94', 'FSCN2', 'NAA35', 'MRAP', 'SHISA9', 'FKBP1B', 'CCL19', 'ARL15', 'LYPLAL1', 'EIF3IP1', 'HIST1H1T', 'SLC25A11', 'ACLY', 'AK9', 'CIZ1', 'SYN3', 'SH3D21', 'RPAP2', 'HHEX', 'LRRC31', 'PHF2', 'ZNF131', 'OR52E2', 'FANCG', 'SCARNA20', 'LINC00887', 'ABLIM3', 'INTS6', 'ADAMTS10', 'S100G', 'FAM49A', 'MUS81', 'TNIK', 'ROR2', 'WNK2', 'TM6SF2', 'SAT1', 'LCE2D', 'SLC35A1', 'SPATS2', 'RFX4', 'PRAMEF9', 'C16ORF90', 'BAZ1B', 'CXORF57', 'ZNF75A', 'CSH1', 'TRAF3IP1', 'UBA7', 'RPL23AP32', 'MSANTD2', 'CMTM2', 'POU3F3', 'SREK1IP1', 'CYP4F35P', 'GFOD2', 'PGS1', 'FAM205A', 'CYP4F2', 'SCOC', 'ACOT11', 'ACOX1', 'MSN', 'TLL2', 'EQTN', 'CHEK1', 'MARVELD3', 'KRTAP27-1', 'PCGF1', 'HJURP', 'HNF4A', 'CCDC134', 'TUBAL3', 'CDK8', 'PPM1K', 'THRSP', 'TMEM187', 'SNORA14B', 'NUP62CL', 'SNORA64', 'ZFP41', 'B4GALNT1', 'SLC10A2', 'CCDC183', 'NT5C1B', 'FKTN', 'ASPN', 'CCL22', 'BOP1', 'MYF6', 'MRPS25', 'NF2', 'YLPM1', 'OLFM1', 'CFAP58', 'APOC3', 'PXDNL', 'CAMTA1', 'TPX2', 'RPAP1', 'EMC2', 'DCLRE1C', 'TRNT1', 'TM7SF3', 'ASPHD2', 'C20ORF194', 'IFIT5', 'PRORSD1P', 'ZC3H12C', 'RAD54L', 'KCNU1', 'SAMD13', 'UBR5', 'CMKLR1', 'PNLIPRP2', 'PDGFA', 'FAM218A', 'ZNF385A', 'ATXN1', 'LRPAP1', 'CDC26', 'HBB', 'ATP11A', 'TLX3', 'CST13P', 'ACTL9', 'MAF', 'VSX1', 'APOBEC3D', 'SNORD115-35', 'GABARAPL3', 'EFCAB10', 'ZSCAN12P1', 'CSAG3', 'SEBOX', 'OR1C1', 'CNTNAP4', 'LINC00636', 'C3ORF38', 'C14ORF79', 'CYP1A1', 'AKR1C8P', 'TNRC18', 'LINC01124', 'SIGLEC14', 'ECD', 'ASCL4', 'C22ORF31', 'MICB', 'BZW1', 'TSSK2', 'NUP160', 'HSBP1L1', 'EHMT1-IT1', 'C11ORF45', 'KLHL1', 'CDK3', 'TRMT1', 'RPS7', 'OXNAD1', 'MARCH10', 'MUM1L1', 'CTU1', 'RTKN2', 'ZNF268', 'CANT1', 'LINC00669', 'PBOV1', 'ARPC3', 'NPY4R', 'S100P', 'GALNT16', 'TIAM1', 'NFATC2', 'IMPG1', 'ATP5L2', 'TMEM92', 'C1ORF115', 'ARMC1', 'CSN1S1', 'SLC25A51', 'CLNS1A', 'DPCD', 'SRSF10', 'PLSCR3', 'GPX8', 'TMEM248', 'DEFB129', 'SLC39A4', 'GREB1L', 'ALPK2', 'CD320', 'ACACB', 'RUNX2', 'EXOC7', 'RCSD1', 'SLFN5', 'WIZ', 'FABP2', 'DNAJB5', 'PPP5C', 'PLD4', 'TUBB1', 'RSAD2', 'GPATCH2L', 'ALOX15B', 'WDR55', 'AKAP1', 'LINC00341', 'TTTY8', 'ATF1', 'SLC35F4', 'NDUFA10', 'DCAF4L2', 'RSPO2', 'SNORD88B', 'SMAD2', 'NHLRC4', 'LINC00662', 'TRMT61A', 'SHANK1', 'RUFY3', 'CETN4P', 'C4ORF45', 'BARX1', 'OPTC', 'LTA4H', 'CACNG2', 'TAZ', 'UBE3C', 'LRRTM3', 'VWCE', 'DNASE2B', 'EED', 'MAP2', 'TMC3', 'SLC28A1', 'FGF14', 'PPAT', 'CD99', 'SNORD115-7', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.776176187120897e-14 NRMSE: 2.7772280308355827e-15 MAPE: 4.8248169497167735e-11 Pearson Correlation: 0.12138524066710472 Spearman Correlation: 0.18324667389867705 Coefficient of Determination: -16.948734342966624 RMSE: 1.9952598979020693 NRMSE: 0.47703818149047705 MAPE: 772.3685693025532 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 1.3209957048730625, tolerance: 0.02130541006350738 positive)
Pearson Correlation: 0.9997365013757584 Spearman Correlation: 0.9995535843122453 Coefficient of Determination: 0.9994373547600192 RMSE: 0.014926951970562034 NRMSE: 0.0023339773232056967 MAPE: 29.846785278127115 Pearson Correlation: 0.09393423643018635 Spearman Correlation: 0.19198493746804826 Coefficient of Determination: -12.99105353191963 RMSE: 1.7616018925065733 NRMSE: 0.4211738852643268 MAPE: 626.5670480814875 Predictor: RandomForests Pearson Correlation: 0.6106462653408715 Spearman Correlation: 0.5288946072368547 Coefficient of Determination: 0.29828138740817467 RMSE: 0.5271513328293855 NRMSE: 0.0824253510795693 MAPE: 267.4589731412912 Pearson Correlation: 0.40665631995587626 Spearman Correlation: 0.41675581989800375 Coefficient of Determination: 0.15284590652227503 RMSE: 0.4334747111870965 NRMSE: 0.10363762042440026 MAPE: 106.00277956987976 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['RAB30', 'LXN', 'ZNF596', 'SLC38A8', 'YPEL4', 'MT1A', 'ADAM12', 'SPATA5', 'GPR89A', 'C16ORF93', 'GJD3', 'PCDHGB4', 'SLC2A9', 'ZNF761', 'HSD17B1', 'SMIM19', 'TTLL2', 'ATP6V1G2', 'TRIM26', 'AGO2', 'CPNE2', 'SNORD50B', 'GYPA', 'SLC35F2', 'ASIC5', 'NDUFS5', 'CCDC54', 'AAMDC', 'MYCBP2', 'KRT6A', 'COX5B', 'BNIP3L', 'MTMR9LP', 'SNORA71B', 'RBM7', 'FOXL1', 'HEXIM2', 'LSM11', 'INHBA', 'CCNA1', 'GPC5', 'ZNRF2', 'TSSK2', 'OTOA', 'FGF23', 'FGF6', 'KRTAP5-8', 'SHFM1', 'SNORA61', 'MTUS1', 'TONSL', 'DENR', 'VPS25', 'DDX41', 'TAF9B', 'FAM92A1', 'HVCN1', 'GYPB', 'OR6C68', 'LRRC40', 'CHST1', 'LOC90246', 'PLN', 'ZFP90', 'GLE1', 'PITHD1', 'HEY2', 'ZNF454', 'RHBDF1', 'ME1', 'BTD', 'TTTY17A', 'SYNM', 'RAB39A', 'SECISBP2L', 'TSNAX', 'NDUFAB1', 'ABCA5', 'AWAT1', 'UPF3A', 'MORN4', 'TIMM17A', 'KIAA0556', 'TMEM138', 'PRDM13', 'HOXA13', 'FAM224B', 'CACNG2', 'TSIX', 'OLFM3', 'L1TD1', 'GSTT2', 'CCR4', 'NFKBIB', 'CCDC101', 'SMARCD3', 'CCNH', 'LSG1', 'HIST1H1T', 'HMP19', 'DMP1', 'GJA4', 'GGA1', 'TUBD1', 'ARID5A', 'SNRPE', 'KRT71', 'ZNF280D', 'RIBC1', 'PSD', 'RAB40B', 'RTTN', 'ATAD1', 'CACNA1D', 'LCE3B', 'LOC285740', 'SCN9A', 'LAMA3', 'SLC16A10', 'KMO', 'LYRM7', 'IFI30', 'ZNF324B', 'HIPK4', 'ABCC12', 'WDR81', 'ATP10D', 'AIG1', 'OBP2B', 'LRRC8E', 'CCKBR', 'DLG1', 'C16ORF86', 'KLF13', 'LINC01512', 'OR52B2', 'PAX9', 'CA11', 'DYSF', 'ATXN1L', 'CCDC186', 'MYLK4', 'MDC1', 'CCDC64', 'RPUSD1', 'GK2', 'DYRK4', 'MTX1', 'CATSPER2P1', 'ADGRG5', 'ING4', 'TIGD3', 'SPDYE7P', 'TSR2', 'PAGE1', 'ASRGL1', 'OTUD7A', 'ABI3BP', 'MMACHC', 'AP5M1', 'CUL3', 'CLDN7', 'IGFL1', 'NAPB', 'HAPLN2', 'TRIM72', 'PCDHB17P', 'PDE4DIP', 'ZNRD1', 'DDX17', 'PSMD3', 'LOC285627', 'TK2', 'COMMD2', 'GPRIN3', 'TSC22D2', 'B3GNT8', 'PMP2', 'DMBX1', 'KAAG1', 'RGS7BP', 'COA1', 'COX5A', 'RFX4', 'FBXW7', 'ACCS', 'MTIF3', 'GFOD2', 'FZD5', 'PRRC2C', 'SENP3', 'CLIP2', 'KCNC1', 'FERMT2', 'PCDHB8', 'BTK', 'KDM5D', 'SETD9', 'TIMM9', 'LCMT2', 'FTH1', 'CDK1', 'FAM183A', 'RARS2', 'CHSY1', 'OSGIN1', 'TELO2', 'UNG', 'VSTM5', 'TBC1D19', 'ARPC4', 'LOC100129550', 'NR1I3', 'GAGE8', 'DBP', 'ANKRD39', 'TMA16', 'ARMT1', 'BPIFA4P', 'KLHL24', 'KIAA1024', 'WBP2NL', 'CLPB', 'PDLIM1', 'PLEKHH1', 'SEPT10', 'AP3S2', 'PSMD13', 'LDHAL6A', 'BCL2L10', 'SSX2IP', 'PNPO', 'RAB11FIP3', 'TEC', 'ST6GALNAC1', 'N4BP2L2', 'VCAN', 'TCOF1', 'TMIGD1', 'ZNF607', 'RIC3', 'GSKIP', 'RNF139', 'LINC00654', 'TYROBP', 'CYSLTR1', 'APP', 'KIAA0930', 'CEP250', 'R3HCC1L', 'SLC27A2', 'BAHCC1', 'IPO8', 'FGF11', 'AP3B1', 'GHRL', 'OR5K4', 'GRIN2D', 'PFN4', 'MYCNOS', 'PLAGL1', 'TECPR2', 'FAM19A3', 'FDXR', 'ZBTB44', 'ZNF853', 'RPL31P11', 'INTS8', 'PNN', 'FAM83F', 'NUDT19', 'ZNF75A', 'RLTPR', 'COL22A1', 'RTN4RL2', 'EPHB3', 'CHD4', 'RND3', 'B4GALT4', 'KLF8', 'WDTC1', 'TRMT10A', 'MAP3K11', 'LY6G6D', 'TNNT2', 'WDR55', 'KIAA0100', 'HTRA3', 'WSB2', 'TCEAL8', 'TMEM108', 'GYLTL1B', 'MVK', 'CLDN22', 'GOT2', 'ZNF623', 'KLHL31', 'TNFAIP3', 'ITGAL', 'PRRG4', 'ZC3H12B', 'PRELP', 'LINC00628', 'AFAP1', 'SELPLG', 'SKIDA1', 'BSPRY', 'MST1P2', 'DKK2', 'E2F5', 'SCN2A', 'DGKG', 'STUB1', 'HIST2H3C', 'N4BP2L1', 'DOPEY1', 'TGM3', 'OCIAD2', 'GLT8D1', 'CXCR2', 'RBM26', 'FKBP15', 'FOXL2NB', 'OR12D3', 'ADAMTSL1', 'LAPTM4B', 'HIST1H4K', 'SSX4', 'STAP2', 'CCDC25', 'SUSD4', 'RAB6C', 'PPARGC1A', 'SLC13A4', 'RPL3L', 'PARP8', 'SECTM1', 'CLINT1', 'DNAJC22', 'ETS1', 'GDF3', 'KMT2B', 'SCARNA12', 'IPPK', 'TMEM104', 'VTI1A', 'CRADD', 'LINS', 'TM9SF3', 'CPXM2', 'AARD', 'LY6G5B', 'TAB3', 'TXNIP', 'KIAA1875', 'JAM2', 'RAB9B', 'TLR9', 'FAM65A', 'ZNF799', 'TMEM140', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.8478985813208257 Spearman Correlation: 0.8297601068500196 Coefficient of Determination: 0.718932004205869 RMSE: 0.100756694792139 NRMSE: 0.06790815975530357 MAPE: 195.78759426853026 Pearson Correlation: 0.00993027077616961 Spearman Correlation: 0.16968041995536107 Coefficient of Determination: -8.217371928346628 RMSE: 0.650105666599641 NRMSE: 0.44714914236953346 MAPE: 1357.9726877924327 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.12316539373729274, tolerance: 0.0019432053784754488 positive)
Pearson Correlation: 0.828490119749061 Spearman Correlation: 0.8080350049095716 Coefficient of Determination: 0.6859266450951162 RMSE: 0.10650837554435158 NRMSE: 0.07178468683063623 MAPE: 240.7654377838217 Pearson Correlation: 0.029464131053736672 Spearman Correlation: 0.16339106472649284 Coefficient of Determination: -1.5856078936062787 RMSE: 0.34431958645658 NRMSE: 0.23682643560144168 MAPE: 1008.2254861795061 Predictor: RandomForests Pearson Correlation: 0.608183509244449 Spearman Correlation: 0.5505242706655489 Coefficient of Determination: 0.20628847974781928 RMSE: 0.16931660666350457 NRMSE: 0.11411627979908916 MAPE: 155.227981206787 Pearson Correlation: 0.10608410480189294 Spearman Correlation: 0.14083716754573 Coefficient of Determination: 0.010279564580917167 RMSE: 0.21302798738773998 NRMSE: 0.1465227681514695 MAPE: 155.5763653801346 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['ARF6', 'STAT3', 'MLST8', 'UBA5', 'GIMAP6', 'USP36', 'FTO', 'DHRS4-AS1', 'PHF19', 'TIPRL', 'HIST1H4H', 'TNFRSF8', 'PCDHB8', 'C16ORF13', 'PCYT1B', 'MYH8', 'NCL', 'TSPAN4', 'TPSAB1', 'PABPN1', 'NTN4', 'OR5K4', 'NRTN', 'LRTOMT', 'SLC6A4', 'CFAP57', 'ZNF763', 'ELSPBP1', 'GDF2', 'LXN', 'CBR4', 'CSF1', 'MIR100HG', 'TDP1', 'GOLGA6L9', 'SVOPL', 'SPRTN', 'TMEM219', 'SEPT12', 'G6PC3', 'ANKRD34B', 'SERGEF', 'ZNF622', 'RPL23AP64', 'EBF2', 'ENO3', 'FBLN2', 'LINGO3', 'USP43', 'DLGAP1', 'CCDC6', 'CLK2P1', 'MBNL3', 'UBE2QL1', 'CTTNBP2NL', 'AHCYL1', 'SPATA24', 'GDF9', 'GATA6', 'MCM4', 'TTI2', 'CASP1', 'ILF2', 'GMPS', 'PLEKHB1', 'ATG4D', 'RGS22', 'PHKB', 'ACKR2', 'KCNK12', 'RRN3', 'ARMC12', 'UBE4A', 'WRNIP1', 'HLA-DQA2', 'SPAG7', 'ATP1A3', 'CYP3A43', 'TNS1', 'ZNF592', 'ZNF587', 'GCLC', 'C20ORF27', 'HRASLS', 'TMEM87B', 'PGM5-AS1', 'MBOAT4', 'KRTAP3-2', 'TGM1', 'MDN1', 'LINC00032', 'SMARCAD1', 'TTTY6', 'SUCLG1', 'ZBTB21', 'TEX37', 'CSAG1', 'FAM110B', 'ANG', 'FEN1', 'MRC2', 'HMSD', 'CAMK1', 'LYPD5', 'CTDSPL2', 'VWCE', 'RBM24', 'RETN', 'SNORD114-25', 'HOXB6', 'DRAXIN', 'EGR2', 'MESP2', 'ZNF287', 'SCD5', 'ASPA', 'PDZRN4', 'NRARP', 'CRYBB1', 'ARMCX1', 'MARK1', 'GOLGA8B', 'NTSR1', 'PTGES3', 'APOA1BP', 'PPM1H', 'RBMS1', 'BAG2', 'ACMSD', 'POLH', 'PANK3', 'FICD', 'RHCE', 'NAT1', 'FIGF', 'FLG2', 'LOC200726', 'SNORA28', 'CROCC', 'RBPMS', 'ZFP92', 'ELAC2', 'BCAS4', 'RNASEH2C', 'PPM1E', 'OR8H2', 'NOL11', 'CERCAM', 'ZBTB40', 'TMEM160', 'PRSS3P2', 'CCDC127', 'HBBP1', 'RAD18', 'ZNF137P', 'EXOC2', 'PSMG1', 'WASH3P', 'PLIN5', 'CSNK1G3', 'BUB1', 'ARRB1', 'C7ORF13', 'ALS2CR12', 'DYNLRB1', 'DNASE1L3', 'B4GALT1', 'UGT2A3', 'AGFG2', 'ERRFI1', 'SNORD116-24', 'TAAR5', 'ASB7', 'PRDM1', 'RSF1', 'ZFYVE9', 'IWS1', 'MSMB', 'MTMR11', 'TERT', 'TRIM16', 'SP140', 'SLC16A6', 'EZR', 'HAVCR2', 'ADAMTS9', 'PRR22', 'STK11', 'ARHGAP39', 'KRT20', 'ZNF48', 'IGF1', 'TAGAP', 'VENTX', 'CPSF7', 'ATRN', 'SERPINA5', 'PLCD1', 'CDRT15P1', 'LOC256880', 'CCDC43', 'SNORA21', 'BACH2', 'IFNAR2', 'SNX9', 'MRPL45', 'ZBED4', 'RANGRF', 'HMGCL', 'CHCHD3', 'OR5AN1', 'ATP6V1C2', 'MCM3AP', 'PASD1', 'KLF8', 'LRRC1', 'GPR176', 'PLK3', 'CFAP221', 'TBX2', 'NT5DC1', 'ITGBL1', 'ECH1', 'SLC25A43', 'SPRR3', 'NFKBID', 'OR10A5', 'AOC1', 'SEC24B', 'PABPC1P2', 'ETV5', 'CCDC112', 'EDC4', 'TRPV2', 'SH3PXD2A', 'LSS', 'NAA10', 'SSH1', 'LOC284441', 'OR3A4P', 'OTUD3', 'LRRC34', 'DNAJC16', 'MUC5B', 'PPL', 'SLC25A44', 'PCBP3', 'BEND3P3', 'NR1I3', 'H2AFX', 'CLIC6', 'SPATA32', 'IL17RA', 'GPRC6A', 'HECW1', 'TAS2R40', 'NGDN', 'OR2H2', 'GP6', 'C1ORF158', 'GDF7', 'PSG8', 'MAP1S', 'IL1RL1', 'C16ORF90', 'OSBPL10', 'RAC2', 'VCX3A', 'PRO0628', 'EREG', 'LRRC41', 'GTF2H2', 'CXCL11', 'CCT6P1', 'FGFR4', 'LTBR', 'BUD13', 'DLX5', 'BPNT1', 'OSBPL1A', 'EPN2', 'DLX3', 'RFPL4B', 'ZCCHC12', 'ZMYM2', 'KTN1-AS1', 'CUL3', 'DHX36', 'CCND1', 'HINT1', 'MYL12B', 'HTR5A', 'CHRM5', 'CLN3', 'FOCAD', 'COQ10A', 'CTSE', 'HSPA2', 'EXOC5', 'RHBDL3', 'LINC00593', 'BRF1', 'TMEM200C', 'NRIP1', 'PAN3', 'SLC52A3', 'FSHR', 'B3GALNT1', 'ZW10', 'COPS3', 'PEX11G', 'SUGT1', 'ANXA2P3', 'WRAP53', 'TCL1B', 'HIST1H3J', 'HDGFRP2', 'FRRS1L', 'MNAT1', 'PDP1', 'SNORA69', 'GPAT2', 'TMPRSS4', 'ZNF18', 'C1ORF21', 'TYK2', 'DIRAS1', 'EEF2', 'CABLES1', 'CFAP70', 'POU4F1', 'PLAC9', 'CCRN4L', 'RNF24', 'ZNF205-AS1', 'OR5W2', 'COX4I2', 'NAP1L1', 'C17ORF53', 'OR4N4', 'ZNF25', 'ADAM22', 'KCTD16', 'MEGF11', 'SNORD49A', 'RPL13P5', 'UXS1', 'NSFL1C', 'GFI1B', 'LETM2', 'LINC00923', 'C4ORF45', 'PREX1', 'EVA1A', 'PLB1', 'TEPP', 'FAM222B', 'ESYT2', 'ZNF782', 'CHRNA5', 'SSTR4', 'ARPC3', 'FABP5', 'GIMAP8', 'SPOPL', 'CLTB', 'C9', 'RNF222', 'FAM134A', 'PRMT6', 'SCN8A', 'SRMS', 'ZEB1', 'LOC81691', 'KHDRBS2', 'DNAJB8', 'AKAP3', 'RAMP2', 'CEACAM16', 'ZNF385D', 'BDH1', 'ERLEC1', 'CT83', 'GAPDH', 'SUGP1', 'KRTAP5-8', 'HCG27', 'OMD', 'PTPN1', 'TBC1D8B', 'ZNF235', 'CLDN1', 'TRHDE', 'KRTAP11-1', 'FEZF2', 'TUBA4B', 'CKMT1A', 'PUM2', 'SNORD43', 'TAS2R10', 'HNRNPL', 'SDHA', 'SMIM10L2A', 'BTG1', 'LAMTOR3', 'MAP3K7CL', 'ZDHHC6', 'HIST1H4F', 'GSTA2', 'NEUROG3', 'FLJ44635', 'NDC1', 'LIPE', 'PDK1', 'ABHD14A', 'IRX6', 'UBXN11', 'ZNF134', 'RASL10A', 'PLA2G2F', 'KDM3B', 'CENPI', 'FAM185A', 'PKHD1', 'APH1B', 'UBAP2', 'DHX58', 'SNORA24', 'ZNF594', 'AHSA2', 'B3GALT5-AS1', 'HOXB7', 'VRK3', 'WNT7B', 'GSKIP', 'ZNF780A', 'KCTD4', 'HBG2', 'GAP43', 'ZNF418', 'BPHL', 'C11ORF73', 'TMEM26', 'SON', 'TJP1', 'HYAL1', 'IPO5', 'EML3', 'ANAPC1', 'WBP2NL', 'PLEKHO1', 'LIMD2', 'OR4K5', 'GNAI1', 'STAM2', 'ZSWIM6', 'FABP7', 'NLE1', 'SERPINA10', 'PCAT18', 'DMRT1', 'SLC2A1', 'WT1-AS', 'RTL1', 'CLEC3B', 'AKAP1', 'FAM169A', 'SPINK4', 'USP32P2', 'FBXO47', 'TMEM175', 'AP5S1', 'NKX2-4', 'ADCK5', 'TROVE2', 'CACNA1F', 'DUSP5', 'ZNF428', 'XKRY2', 'HMHB1', 'ANKRD32', 'FANCI', 'NTN5', 'FBXO9', 'DIRC1', 'TBC1D10B', 'EARS2', 'INSL4', 'GPR142', 'LMBR1', 'FERD3L', 'TAF9', 'TFE3', 'TYW5', 'MRPS31', 'FASTKD1', 'CCL27', 'PROX1', 'MYT1', 'B3GNT7', 'ZDHHC22', 'PIK3R1', 'ZNF562', 'CACNA1I', 'CAPG', 'CEP97', 'ACADS', 'CAMK2A', 'PIKFYVE', 'TCEAL6', 'PCDHA9', 'LOC285627', 'S1PR2', 'PSPN', 'GJB1', 'POLE4', 'GPR61', 'FLYWCH1', 'HPYR1', 'WAPAL', 'AGO3', 'PRSS48', 'LIN37', 'EMB', 'SGCZ', 'TRIM68', 'BCR', 'RER1', 'HIST1H3E', 'SPEF2', 'NYNRIN', 'LRSAM1', 'FAM168A', 'JPH4', 'LSM8', 'TMEM8B', 'IGFBP5', 'RHOD', 'DDX27', 'NDUFB5', 'HLA-DOA', 'LOC100287704', 'OR6Y1', 'CLIP4', 'POLDIP3', 'DCAF16', 'ZUFSP', 'TNP1', 'SURF6', 'SRCIN1', 'PCNXL3', 'ATF1', 'CCSER2', 'CALML5', 'OSGEPL1', 'COL23A1', 'SNORD116-4', 'EPHB2', 'DHRSX', 'TTC37', 'PFN1', 'RASGRF1', 'EGFL6', 'FOXE1', 'SCRIB', 'HP', 'SYP', 'KCNB1', 'ERP29', 'EDNRB', 'ZNF488', 'TEFM', 'CDKN2D', 'RBM34', 'IL2RA', 'TEKT4P2', 'SDHC', 'ITGB3BP', 'DEFB134', 'KRT25', 'GIMAP1', 'LINC01119', 'TBC1D23', 'PRKG1', 'SNX29P2', 'CTRC', 'RIN3', 'LINC00628', 'LAMC1', 'LRIG1', 'PPAPDC3', 'LOC401127', 'CT55', 'SPEF1', 'DPYSL4', 'C6ORF25', 'NXPE1', 'TCTEX1D1', 'CRIP2', 'RBMS3', 'SLC7A13', 'TRPV3', 'SLC35B1', 'SNORD65', 'EVC', 'B4GALNT3', 'TPR', 'TSPAN17', 'PIWIL3', 'ANKRD9', 'SNORD35A', 'MYH2', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.7505434681756876e-13 NRMSE: 4.086999131900653e-14 MAPE: 1.5593675885169735e-10 Pearson Correlation: 0.06404803695808636 Spearman Correlation: 0.043773613137320914 Coefficient of Determination: -42.466019538579594 RMSE: 4.3284950882828515 NRMSE: 1.3363264759602518 MAPE: 2348.3412778712022 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 6.473888769584587, tolerance: 0.02397725168374273 positive)
Pearson Correlation: 0.9850050748185899 Spearman Correlation: 0.9786968664997252 Coefficient of Determination: 0.9700998659347294 RMSE: 0.1154370263849807 NRMSE: 0.026951117478749696 MAPE: 137.03955140588684 Pearson Correlation: 0.2090549312515558 Spearman Correlation: 0.22123218493996186 Coefficient of Determination: -5.527606851861923 RMSE: 1.6774090755000781 NRMSE: 0.5178627012133241 MAPE: 815.1614751055838 Predictor: RandomForests Pearson Correlation: 0.6761827484739901 Spearman Correlation: 0.6055492883355402 Coefficient of Determination: 0.445653578238292 RMSE: 0.4970489806027825 NRMSE: 0.1160461758971756 MAPE: 186.79177423111838 Pearson Correlation: 0.6105156048700109 Spearman Correlation: 0.5725340372503326 Coefficient of Determination: 0.3652326481981716 RMSE: 0.5230814082959625 NRMSE: 0.16148973736407105 MAPE: 101.30315752910077 Protein: TP53 x_train_column_count: 1002 x_train columns: ['PAXIP1', 'LOC644936', 'SH3BGR', 'KRTAP11-1', 'LGSN', 'SMAD9', 'XKR5', 'ATP6AP2', 'POLR2H', 'ZAP70', 'AGAP6', 'SHISA6', 'ZNF554', 'SPDYE1', 'PDHA2', 'LOC407835', 'SPOCK1', 'EFCAB8', 'ARSE', 'C15ORF56', 'GALR3', 'FAM43B', 'PPIB', 'ZPLD1', 'TMEM143', 'CHST8', 'DNALI1', 'SPIC', 'ESRRB', 'CDKN2C', 'KHDRBS2', 'GGH', 'SPAG17', 'NFAT5', 'C21ORF2', 'HP', 'KRTDAP', 'SMAD2', 'TRIM55', 'NOL6', 'SLC4A11', 'BST1', 'NAA11', 'FAM71A', 'PTRF', 'ATP4A', 'PLCD1', 'DENND2C', 'ABHD15', 'MGC15885', 'DNAJB1', 'EDN3', 'CMKLR1', 'AMMECR1L', 'MAN2C1', 'BAP1', 'GTF2H4', 'PRSS53', 'TIA1', 'CYB5D1', 'IGF2', 'SPICE1', 'ZC3H7A', 'SCNN1D', 'HTATIP2', 'PARN', 'ZFAND1', 'ANKRD28', 'LOC646813', 'RTN4', 'MPZL1', 'LOC284578', 'RNF135', 'IL5', 'LINC00472', 'GAMT', 'HS6ST3', 'SEC22C', 'RUFY2', 'SNAR-E', 'LHFPL2', 'SNORD45C', 'MLH3', 'GMFG', 'HSPA1A', 'ADD2', 'TMEM200B', 'UCP2', 'ID2', 'LOC440173', 'BCL2A1', 'PLOD3', 'HIGD2A', 'DPT', 'NPFFR2', 'KANSL2', 'CCDC107', 'MLLT3', 'SLC22A2', 'EIF3B', 'FZD3', 'PHOSPHO2', 'ZFYVE27', 'GATAD2B', 'PIP5K1C', 'MTG2', 'HAPLN2', 'NPTX1', 'FUNDC2P2', 'TOLLIP', 'S100A5', 'ZYG11A', 'ZNF619', 'ZNF546', 'C10ORF90', 'OR2T33', 'PKD1L1', 'TACC1', 'S100A7L2', 'HEATR1', 'TTC39A', 'SNORD65', 'RTP3', 'G6PC2', 'VAT1', 'FAM184A', 'FRY', 'UGGT2', 'FGF21', 'ALPK3', 'ZNF808', 'CS', 'SPP1', 'SNORA79', 'PID1', 'CLCN7', 'C17ORF70', 'CHRM4', 'KLHL40', 'FAHD2CP', 'PLAC1', 'DDX31', 'PLEKHS1', 'C19ORF38', 'GPR151', 'PPP1R15B', 'DYNLT3', 'RASGRF2', 'FLT4', 'HSPA9', 'FAM178B', 'SRRM4', 'RPS15AP10', 'ADAM12', 'LY6H', 'SPIN2B', 'OR10A6', 'CD40', 'MPV17', 'CDKAL1', 'CWH43', 'H2AFZ', 'KIAA0907', 'ANXA11', 'MSL2', 'TEX29', 'ZNF718', 'CHCHD6', 'EEF1DP3', 'MAPK1', 'HMGXB3', 'KRTAP10-4', 'ARMC5', 'GTF2IRD1', 'SMC5', 'ZBTB26', 'GLUD1', 'GCSAML', 'IVL', 'PQLC2', 'ITPK1-AS1', 'CD7', 'SOX18', 'RLN1', 'FN3K', 'CKMT1A', 'SNORA70', 'TMOD4', 'TRO', 'BPIFB3', 'C12ORF49', 'C19ORF40', 'ACTL6B', 'GALNT10', 'FLVCR1', 'OR4K17', 'ALPPL2', 'TMEM50B', 'GPR176', 'HMGA1', 'GPR161', 'ATXN7L3', 'ZNF605', 'FMO4', 'WNT3A', 'EBNA1BP2', 'SRA1', 'WDYHV1', 'ANKRD26P1', 'XDH', 'FAM209A', 'GRK1', 'ISPD', 'HOXC6', 'CACNA1D', 'FAM111B', 'SPATA31A6', 'SLC35D2', 'NSMCE2', 'CORO6', 'THUMPD3-AS1', 'BAK1', 'RGS7BP', 'DHX35', 'DPY19L1', 'RS1', 'C11ORF42', 'PNRC2', 'NSRP1', 'RPS6', 'SPOP', 'RNF151', 'WNT8A', 'LMCD1', 'TRIM44', 'MORF4', 'KDSR', 'FOXC2', 'ASB2', 'AP3M1', 'OR2H2', 'GABARAP', 'CWC22', 'OLFM3', 'ZNF558', 'LIX1', 'KCNJ4', 'CEBPE', 'OR10G3', 'NETO1', 'BTG2', 'LIPM', 'IGFL4', 'TPTEP1', 'MAP1LC3B', 'EIF5A2', 'TERT', 'AKT3', 'OPRK1', 'CLDN7', 'MID2', 'ADGRF4', 'HIPK3', 'TM4SF20', 'OR5H15', 'ATAD5', 'RRS1', 'TBCE', 'RTEL1', 'COL9A2', 'TMEM216', 'TMPRSS3', 'APH1A', 'RASA2', 'SPSB2', 'TRIM75P', 'ITGAX', 'OGDHL', 'SECTM1', 'USP1', 'ASAP1', 'SNORD119', 'TTLL11', 'TM7SF3', 'CD72', 'SLC35F6', 'GPR135', 'SNORD115-39', 'LGALS3BP', 'CACYBP', 'OR1N2', 'ZNF844', 'ELAVL4', 'ZBTB43', 'SNORD29', 'PUSL1', 'WDR13', 'FAM78B', 'FBLIM1', 'BAHD1', 'TMEM182', 'APCDD1L', 'ITGB1BP1', 'SEPN1', 'LUC7L', 'TRIO', 'LINC01184', 'NEO1', 'MRPL40', 'TMEM8C', 'KMT2D', 'ZNF439', 'TBL1X', 'MON1B', 'SLC25A53', 'LINC00667', 'MCF2', 'XAGE3', 'CDKN2AIP', 'TEDDM1', 'DNAL4', 'ALDH9A1', 'RANBP9', 'AIG1', 'CAMTA2', 'SLC22A13', 'P3H4', 'OR10H1', 'TMEM41B', 'BARX2', 'TRPM1', 'WDHD1', 'DKK1', 'LOC284023', 'FZD8', 'TTR', 'RPA1', 'ACBD3', 'PDIA3P1', 'POU3F2', 'KCNH8', 'KLHL7', 'SUOX', 'CEL', 'SNAPC3', 'JAZF1', 'PLRG1', 'CYP4F3', 'ENDOD1', 'FBXO24', 'OR8U1', 'EXOSC4', 'CDKL1', 'SCARNA4', 'UBE2J2', 'FEZF2', 'SYT12', 'EBF4', 'NDUFAF5', 'ALKBH7', 'CDH17', 'OR2J3', 'FAM110C', 'LRRC59', 'SPTSSA', 'TSHB', 'CDK20', 'CABP4', 'SLC25A40', 'FBXO27', 'RGS7', 'ZNF233', 'GOPC', 'PRPF4', 'AKR1B15', 'AMPH', 'CTSL', 'SPDYE4', 'RFC3', 'SNORD78', 'MANSC1', 'LOC153910', 'NTN5', 'PIAS1', 'OR5K4', 'TMEM31', 'CBS', 'SND1-IT1', 'STON2', 'RPL30', 'FAM175A', 'SNORD37', 'DOLPP1', 'SDHAF2', 'NIPAL4', 'TMEM187', 'DLG2', 'VAX2', 'SLC52A1', 'SLC19A3', 'INCENP', 'CDH20', 'ERO1L', 'ZNF217', 'MAML2', 'SYNPO2L', 'ST8SIA4', 'SEC24A', 'TMEM38B', 'POP1', 'IRGQ', 'CNNM4', 'MMP13', 'NMT2', 'SPRR2G', 'CSRNP1', 'KPNA2', 'DDO', 'WFDC6', 'KIAA0513', 'C15ORF57', 'MALL', 'LINC00167', 'TRIM5', 'ZNF530', 'ABCA3', 'C1QTNF2', 'MUS81', 'OR2B3', 'PTCH2', 'SLC25A32', 'SPINK1', 'DNAH12', 'CDAN1', 'ALS2CR11', 'SALL1', 'ANKRD13A', 'AQP6', 'LRP10', 'ANAPC15', 'SIPA1', 'LAMC1', 'HNRNPU-AS1', 'SNORA34', 'MTMR6', 'MSMO1', 'EPHX4', 'MST1R', 'KIAA1210', 'MYLIP', 'SLX4', 'ZNF644', 'RNASEH2A', 'P4HA3', 'IL32', 'SNX1', 'C2CD4C', 'KAT6B', 'RHBDL2', 'MAFF', 'C9ORF117', 'STMN2', 'MRTO4', 'GYS2', 'NCK1', 'EBPL', 'LOC440461', 'SSR3', 'ARSF', 'DCAF6', 'HEXIM2', 'HES2', 'ELSPBP1', 'NDUFAF1', 'CD40LG', 'FAM210A', 'LARP6', 'TUBB', 'TMCO3', 'VWA8', 'PTPN4', 'ERC2', 'MIR99AHG', 'SMPDL3A', 'FAM160A2', 'EXOC3L2', 'CREG2', 'ANKFN1', 'ESCO2', 'FXYD5', 'RBM12', 'CDHR5', 'FAM106CP', 'HIST2H3C', 'STEAP2', 'GNPDA2', 'LLGL1', 'IL22RA1', 'DAPK2', 'NDUFB2-AS1', 'KIAA0754', 'SLC44A2', 'DUOX2', 'DMP1', 'PLN', 'PCDHGA3', 'SUPT3H', 'OR2T5', 'UPK3B', 'FUT10', 'PDIA6', 'LBX2', 'TTPA', 'DHX34', 'HACE1', 'ZNF503', 'NUTM2A-AS1', 'PELI1', 'OR4K15', 'IRF2', 'SLC22A3', 'CNGA2', 'SARAF', 'AARS', 'LEPROTL1', 'GLYATL3', 'CLN6', 'BCL9', 'FRZB', 'HOXA13', 'SYK', 'UQCRB', 'SPRR1B', 'VPS35', 'MSN', 'PDLIM5', 'TANGO6', 'C6ORF223', 'FCGR1A', 'ZNF140', 'LINC01566', 'NDST3', 'TMEM179', 'LOC100130093', 'BRDT', 'SPNS1', 'LOC151174', 'HIST1H4G', 'RNPS1', 'TAP2', 'NEMF', 'GCM1', 'SPAG5', 'YAP1', 'CMTM3', 'APOPT1', 'ZHX2', 'RASEF', 'PARPBP', 'CKAP2', 'GPT2', 'TRIP4', 'ATG7', 'AP2A1', 'MTHFR', 'TRIM35', 'PTPRZ1', 'USP44', 'PITX2', 'NUP107', 'NUDT18', 'ITFG2', 'FOXF2', 'ALDH3B2', 'C2CD2L', 'C17ORF102', 'BOLA2', 'NAPSA', 'KIAA1958', 'ADRA2A', 'PLEKHA7', 'CSN2', 'STAT5B', 'C1ORF186', 'NAA40', 'RAB24', 'OR1B1', 'LRRC47', 'QKI', 'ZNF768', 'POLR2D', 'RALBP1', 'ERLIN2', 'JADE1', 'CYGB', 'CAGE1', 'COL5A3', 'LGMN', 'KCNK7', 'SNORD36B', 'TRAPPC4', 'LINC01558', 'EVC', 'XRRA1', 'GTSF1L', 'PGA4', 'RBP2', 'GALR1', 'ST6GAL1', 'MRPS34', 'CCT6B', 'DPF2', 'NLE1', 'ARHGAP39', 'FECH', 'GTF3C3', 'FGF1', 'ITM2C', 'PNMAL1', 'TMEM30A', 'SENP8', 'ARHGEF15', 'CLDN20', 'KLF1', 'UQCR11', 'NPY1R', 'CACNA2D4', 'ZNF737', 'C16ORF70', 'EIF6', 'SELM', 'ARHGAP4', 'CHAC2', 'CCDC62', 'TANC2', 'NCOR1P1', 'CFAP47', 'LRRC75B', 'GFPT1', 'CABP5', 'CCL17', 'PCDHA13', 'HPSE', 'NDST2', 'RASSF3', 'PAPOLG', 'BEND7', 'HIST2H2BF', 'SSBP2', 'PDCL3', 'QSOX2', 'LOC400043', 'RBMY1J', 'AATK-AS1', 'GPR50', 'TMTC1', 'RBBP4', 'SDCBP', 'NXPE1', 'DMRTC1', 'LOC400927', 'GRIP1', 'PDGFC', 'ONECUT1', 'EXTL3', 'SNORD115-11', 'UBE2A', 'SOX10', 'OR10R2', 'BDP1', 'FDPS', 'ADCY5', 'TXNDC8', 'SHOC2', 'TIFA', 'COASY', 'TFEC', 'FBXO16', 'C1ORF106', 'ZNF568', 'TCEAL8', 'OVCA2', 'MSTO1', 'ICAM1', 'EPHA8', 'FANCA', 'SYT9', 'CAPN9', 'TSR3', 'MID1', 'UNC80', 'CMA1', 'MAGEE1', 'DNAH10', 'HIST1H3F', 'RNF141', 'CNOT1', 'GLIS3', 'FAM107B', 'TOP2A', 'MUT', 'LINC00284', 'MYEF2', 'MORN2', 'REXO4', 'OR8K1', 'TNRC6A', 'KRTAP5-9', 'H3F3B', 'PRCP', 'EME2', 'PPARD', 'ANKRD39', 'ARSA', 'LRRC17', 'SPAM1', 'PCMTD2', 'FRS2', 'LOC143666', 'GPATCH3', 'SNORD114-14', 'TXNRD1', 'ZNF131', 'PGRMC1', 'ZNF273', 'PRAMEF8', 'ZNRF2P1', 'DNAJC3', 'ZNF252P', 'LRRC28', 'ZNF674', 'SLC24A5', 'ZNF846', 'CERS5', 'WASF1', 'CLRN2', 'DUS4L', 'NTRK3', 'SNORD12', 'CLMN', 'ATP13A1', 'CACNG1', 'PLEK2', 'LINC00620', 'CPXCR1', 'FAM118A', 'PABPC4', 'CYB5A', 'ARL2', 'PIP4K2B', 'EDNRB', 'GPR157', 'OR4S1', 'ZNF823', 'S100P', 'FMR1-AS1', 'MSRB2', 'RHBDL3', 'APOH', 'CAMK4', 'SCARB2', 'C11ORF96', 'EIF2AK1', 'HRASLS', 'KDM2A', 'RECK', 'HOMER1', 'CNIH1', 'JRK', 'PPP5C', 'ZNF512B', 'HESX1', 'CCDC167', 'FAR2P1', 'LGALS13', 'ATP13A2', 'MTCH1', 'TMEM190', 'SAMD10', 'TMEM176A', 'TMEM39A', 'C6ORF1', 'PARG', 'ORC4', 'FRS3', 'FAM163B', 'HOGA1', 'WWC2-AS2', 'CYYR1', 'ADIRF', 'EMC7', 'CYP2C8', 'LOC644172', 'CATSPER1', 'SUPT20HL2', 'ETAA1', 'RPS19BP1', 'PMEL', 'TRAP1', 'TCAF2', 'PHF10', 'SORCS3', 'CMTM4', 'RNGTT', 'ID1', 'HNF1B', 'PPP1R9B', 'DNAJC30', 'CXCR2P1', 'ZNF526', 'DHX15', 'MS4A12', 'AMY2A', 'NUDT16P1', 'RNF187', 'MAP3K11', 'TMED9', 'SNORD52', 'ARHGAP29', 'LPAR1', 'RC3H2', 'MYOM1', 'OR51B5', 'WWP2', 'C2ORF73', 'SIPA1L3', 'CPSF4', 'RPL28', 'FDCSP', 'USP3', 'SPP2', 'FAM102A', 'FKBP9', 'PPAP2B', 'SP140L', 'EPC1', 'AP2M1', 'C11ORF53', 'HSPH1', 'FAM117A', 'DNAAF2', 'ITLN2', 'ARL5C', 'SNORD27', 'SPACA4', 'HAUS7', 'SNORA24', 'XKRX', 'POU2F1', 'CXORF56', 'TAB3', 'RFX7', 'UFD1L', 'TOR2A', 'FAM217B', 'ZNF221', 'MAS1L', 'LSMEM2', 'BRIX1', 'RPS27', 'SSTR4', 'PWP2', 'RAI2', 'GPR153', 'C11ORF1', 'AKIRIN2', 'ZNF518B', 'SNORD116-26', 'PAX8', 'TOP2B', 'ZNF773', 'FEM1C', 'TXN', 'C14ORF169', 'PALM2', 'HPR', 'PQLC3', 'KLF10', 'ALAS1', 'CSHL1', 'DKFZP779M0652', 'UCN3', 'LILRA2', 'PRKCSH', 'TP53RK', 'UPP2', 'EXOC5', 'SMIM1', 'RAP2A', 'OR13C8', 'FAM53B', 'EIF2B3', 'SUB1', 'SPATA33', 'PRKRA', 'FLJ41941', 'PWRN1', 'PCDHB19P', 'KRT75', 'PSG3', 'KDM5A', 'RNF168', 'FAM27L', 'E2F7', 'LOC100133050', 'WDR91', 'RCC1', 'DSCC1', 'OR52B4', 'PDLIM2', 'NEDD9', 'BTNL2', 'TRPV5', 'NKG7', 'DCK', 'CTHRC1', 'EIF3IP1', 'HOXA4', 'SAMD4A', 'POTEC', 'MGC16275', 'HPSE2', 'DEFB122', 'KATNAL2', 'KRTAP10-10', 'FOXB2', 'ISCA1P1', 'SUGT1', 'DHDDS', 'VAC14', 'MDFI', 'TAF1', 'RANBP6', 'SNORD63', 'CD93', 'RGS13', 'SLC35F4', 'SYT14', 'BGN', 'RSU1P2', 'ECE2', 'FGG', 'DACH2', 'CCDC57', 'ADA', 'GTSE1', 'MLF1', 'FBXL13', 'HACD3', 'SDHC', 'NOXO1', 'MAP3K10', 'MIOS', 'CHST2', 'SAMD4B', 'LGALS12', 'GXYLT2', 'TDRKH', 'HIST3H3', 'PRAMEF9', 'PRR7', 'GTF2B', 'TSKU', 'CLLU1OS', 'KLHL6', 'PATZ1', 'LINC00596', 'NR2F1-AS1', 'CTNNB1', 'ZNF707', 'HAGH', 'PLA2G2C', 'NOBOX', 'DDIT4', 'ABHD6', 'OR6C2', 'SP2', 'ICAM5', 'RABGEF1', 'HFE', 'NCAPD3', 'MVB12B', 'C5ORF60', 'WDR43', 'RAMP1', 'PRRT2', 'MBNL3', 'GATA6', 'OR6T1', 'MTM1', 'ARRDC2', 'NCKAP1', 'SHISA3', 'DUSP5P1', 'ARPP21', 'OXGR1', 'COX11', 'CLEC4D', 'STBD1', 'FAM183B', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.0701402653338724e-14 NRMSE: 2.571834331492123e-15 MAPE: 1.8286767042889968e-11 Pearson Correlation: 0.2654657001872527 Spearman Correlation: 0.24976121896781756 Coefficient of Determination: -6.8678175440053195 RMSE: 1.207391668417884 NRMSE: 0.45023536218499677 MAPE: 1743.9770876283674 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.6458487513139529, tolerance: 0.010899962745861313 positive)
Pearson Correlation: 0.9997905996021158 Spearman Correlation: 0.9994664280645582 Coefficient of Determination: 0.9995491783180416 RMSE: 0.009557047982549999 NRMSE: 0.0022968151844628693 MAPE: 49.891579636290295 Pearson Correlation: 0.16040326339738187 Spearman Correlation: 0.1254255040586541 Coefficient of Determination: -5.995504855829415 RMSE: 1.1384935273623942 NRMSE: 0.4245433019336292 MAPE: 2215.802058264663 Predictor: RandomForests Pearson Correlation: 0.6756404121958505 Spearman Correlation: 0.5955552815600672 Coefficient of Determination: 0.3840098940866473 RMSE: 0.35327120299786624 NRMSE: 0.08490055347221011 MAPE: 512.6461535958115 Pearson Correlation: 0.4835480623640427 Spearman Correlation: 0.4467312560006983 Coefficient of Determination: 0.20654900992903635 RMSE: 0.38342558413689215 NRMSE: 0.1429790856276796 MAPE: 366.24291204848174 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['STAG3L2', 'KRTAP5-9', 'SNORD115-22', 'GPR39', 'DLK1', 'COBLL1', 'SLCO4C1', 'ELF2', 'HSD17B10', 'SAT1', 'HBA1', 'DDX50', 'RAD54L', 'FGF2', 'FCRL1', 'BLNK', 'STK31', 'SP7', 'NBEAL1', 'LCOR', 'RAP2C', 'MSL3', 'NDUFA13', 'FHOD1', 'LOC284441', 'SMIM24', 'CCDC71L', 'FOXO4', 'SNORD116-11', 'AMER2', 'TTC27', 'SYNE3', 'CCDC115', 'GSTA5', 'CFHR5', 'LRWD1', 'MRPL52', 'FXYD2', 'AKTIP', 'EEF1A1P9', 'TMEM132E', 'SSR2', 'POU3F2', 'MBTPS2', 'SNRNP27', 'ZNF473', 'SLC4A10', 'MED4', 'CLINT1', 'LRRC18', 'PPARD', 'CRAT', 'ZCCHC14', 'DNAJC22', 'PRH2', 'SMARCAL1', 'ME3', 'PSMC1', 'CELF2', 'FAM135B', 'EGFL7', 'MTIF3', 'FAM65C', 'GBGT1', 'OR9Q1', 'PSMB10', 'TNFRSF1A', 'NYAP1', 'SLC2A4RG', 'IL25', 'TRIM42', 'SRSF4', 'UQCRH', 'FCER1G', 'CYB5B', 'ADCY10P1', 'SS18', 'C17ORF58', 'C16ORF87', 'OR13H1', 'STX4', 'CCT8', 'FAM83A-AS1', 'DEFB131', 'OR14I1', 'PACS2', 'ST6GAL1', 'ANKRD54', 'GDAP2', 'IKZF4', 'CD248', 'SUPT3H', 'TUBA4B', 'SNORA27', 'MYEOV2', 'TTI2', 'REEP1', 'NT5C3A', 'COX6A1', 'C12ORF50', 'TMEM55A', 'ATXN3L', 'DCAF12L2', 'SLC45A2', 'ZNF267', 'SNRK', 'GJA8', 'FAM57A', 'USH1G', 'MAZ', 'TRIM24', 'FGD2', 'STAMBP', 'VAMP4', 'PDE8A', 'SLC22A9', 'DHFR', 'ITPK1-AS1', 'ALX1', 'PSME4', 'USP32', 'TMEM40', 'USP17L9P', 'MYOF', 'TUBG1', 'JAGN1', 'ROPN1', 'CCDC163P', 'TBL1Y', 'KLRF1', 'DENND6A', 'DIAPH2', 'EED', 'ZNF575', 'GCLC', 'GLA', 'LSMEM2', 'KIR2DL4', 'LINC00895', 'ISL2', 'NUDT21', 'CHST14', 'PPFIA3', 'VAMP7', 'IDH3A', 'C9', 'PDE6A', 'SNORD115-25', 'DQX1', 'HNRNPU', 'KAAG1', 'UBA6', 'FOXRED2', 'PNN', 'BCAM', 'KLHDC2', 'PLEK', 'PIP4K2B', 'KCND3', 'SCARNA17', 'MMADHC', 'MT1X', 'KRTAP10-8', 'DUSP23', 'ZNF557', 'LILRA2', 'FOXD4L6', 'AMIGO1', 'ADRB3', 'PARD6G-AS1', 'TNFSF10', 'PKD2L1', 'ETFDH', 'PEX26', 'CORO1C', 'OSTF1', 'MANF', 'PALB2', 'BCDIN3D', 'AASDH', 'MAP3K14-AS1', 'GLOD5', 'SARDH', 'RHEB', 'IRX6', 'ZFYVE26', 'G2E3', 'LACRT', 'SPOP', 'TMEM261', 'KCNC4', 'LINC00235', 'TOR2A', 'ZNF483', 'PAX8-AS1', 'GNB1L', 'ZG16B', 'ZNF320', 'ADGRF1', 'CD52', 'CCM2', 'KIAA0125', 'MED11', 'CNN2', 'CST2', 'POGZ', 'GOLGA8DP', 'C18ORF42', 'RELB', 'FAM173B', 'SMPD1', 'LYST', 'ABCA11P', 'RHOC', 'C11ORF42', 'AACS', 'TMED6', 'FAM71C', 'OR2T33', 'EFNA1', 'HOXB7', 'MASTL', 'TRIML2', 'LINC00667', 'SYNJ2', 'SCGB1D1', 'RER1', 'SNORA5C', 'UNC79', 'MTFR1', 'LINC00847', 'PPP1R2P9', 'SNRNP200', 'SFXN2', 'PMPCB', 'PRDX4', 'FMO5', 'CABP5', 'RAX', 'STX12', 'LGR5', 'TECPR1', 'TGM2', 'VRK3', 'TSPAN16', 'UGT1A1', 'CBX8', 'TSNAX', 'RBP5', 'NUP153', 'OR5M8', 'GBA', 'RNF7', 'FZD10', 'C21ORF2', 'FAM183A', 'CTGF', 'LOC728554', 'HOXB8', 'GPR143', 'ELOVL1', 'LOC100129534', 'LCN10', 'NAT9', 'COX8A', 'LGI1', 'NCBP2-AS2', 'FBXO10', 'ZNF439', 'FRMPD4', 'STX16', 'MIS12', 'C4ORF17', 'MRPS23', 'RPL26', 'TTLL12', 'BAHD1', 'OR2T1', 'ZNF418', 'SNORD115-41', 'AGR2', 'TAS2R9', 'MZB1', 'GAPDH', 'CCNE1', 'RSRC2', 'EIF2AK1', 'MDM1', 'PRPF38B', 'RFNG', 'SNORD114-15', 'GADD45G', 'SEPHS1P1', 'PLEKHB1', 'SCN1B', 'STPG2', 'TTC12', 'PLD2', 'TCEANC', 'RIBC2', 'TPRX1', 'ATP2B4', 'STOX1', 'ZNF19', 'ULBP2', 'FCAMR', 'SLC10A5', 'TEPP', 'TEX29', 'SETD3', 'ZIM3', 'WDR38', 'RAPGEF2', 'LOC100134368', 'ESPL1', 'WDR24', 'PBX1', 'AGPAT6', 'ANKRD36BP1', 'HCRTR2', 'SIRPB1', 'LINC00964', 'CTSG', 'RPL13AP17', 'LINC00520', 'FAM13A-AS1', 'ELOVL5', 'ATP6V1B1', 'BMS1P4', 'FAM134B', 'ABCC9', 'TMEM143', 'APOC4', 'PEMT', 'OR5AU1', 'TMEM134', 'ETS2', 'ZCCHC16', 'SNORD95', 'PQLC2L', 'CCND3', 'HRASLS2', 'ATCAY', 'TLR8', 'ATP1B1', 'LOC652276', 'MED29', 'SFR1', 'LMOD2', 'GALNT1', 'ZNF766', 'PTPDC1', 'SEC11A', 'LOC644172', 'ZNF846', 'NHLH2', 'CCHCR1', 'C8ORF82', 'CRHR1', 'BPNT1', 'GCNT3', 'RNF128', 'SERPINA10', 'ZNF154', 'NKAIN4', 'MICALCL', 'SNORD58C', 'PDXP', 'SIDT1', 'HK2', 'CELA3B', 'NR2E3', 'RPL34-AS1', 'OR51F1', 'KCNIP4', 'RPS26P11', 'RAVER2', 'ZNF716', 'CD163L1', 'AGAP6', 'CTNND2', 'RHBG', 'SEMA5A', 'FRS3', 'TPGS1', 'DIRC2', 'SPDYE7P', 'SERTAD3', 'DMXL1', 'HTR2B', 'MLNR', 'TGFBI', 'TBX6', 'CHAC2', 'CRNKL1', 'NBPF15', 'SLC13A5', 'UNKL', 'SUPV3L1', 'FAM35BP', 'ANKRD20A4', 'C18ORF8', 'LPAR4', 'OAS2', 'CHST4', 'ATE1', 'DEFB124', 'PAXIP1-AS2', 'BLOC1S2', 'PSMG2', 'DNASE1L1', 'PRDM9', 'ZNF296', 'LINC00473', 'PPAT', 'FITM2', 'TM4SF18', 'DGKB', 'SERPINF1', 'MAOA', 'TESC', 'C10ORF113', 'ADGRD1', 'DYNLRB2', 'MRPL39', 'METTL2B', 'MYADML', 'IAH1', 'NGFRAP1', 'PLEKHG6', 'NKAIN2', 'RSL1D1', 'C11ORF70', 'ZMYM5', 'ZNF48', 'NPY4R', 'EOMES', 'NUPR1', 'HOXA11-AS', 'PPL', 'PTTG1IP', 'ALDH1A2', 'CLIP4', 'SHKBP1', 'DOT1L', 'ATP5G2', 'PPP1R11', 'SLC45A4', 'KRTAP5-1', 'FATE1', 'CCDC65', 'SNORD77', 'TFAM', 'ARL2BP', 'TRIM6-TRIM34', 'CT45A6', 'ADHFE1', 'CCDC183-AS1', 'OR1S1', 'ADAMTS18', 'ANKRD23', 'PAQR3', 'ZMYM2', 'OXA1L', 'SLC25A19', 'CD300E', 'HAUS7', 'ISX', 'ZHX3', 'GUCY2C', 'PCDHB10', 'SNORD8', 'SGTB', 'OR13C5', 'HBD', 'NRM', 'ARID4B', 'ZNF791', 'TYRO3', 'SPR', 'SRY', 'SLC37A3', 'SSX2', 'LRRC46', 'FAM189A1', 'RHD', 'ZNF226', 'PRR26', 'DIS3', 'CYBB', 'FEZF1', 'BMP3', 'RECQL4', 'AATK', 'ZNF484', 'PFDN4', 'WFDC10A', 'CNOT7', 'GTF3C5', 'KCND2', 'IPW', 'F2RL1', 'MLLT4-AS1', 'ERGIC2', 'MMRN2', 'TRIOBP', 'IMP4', 'IL1RL1', 'CPSF4L', 'SLC2A8', 'IGHMBP2', 'C11ORF95', 'ASCL2', 'KCNC3', 'OOEP', 'MMP19', 'ANKRD53', 'JMJD7-PLA2G4B', 'IGIP', 'AKAP6', 'EFCAB10', 'UBAP1', 'RTN4', 'TMEM194B', 'SNORA29', 'OR4F15', 'USP3', 'DNAH1', 'SMIM12', 'FAM47A', 'GPR34', 'SNORA48', 'AMMECR1', 'PTPRZ1', 'SLC4A2', 'H3F3C', 'PPIAL4G', 'SEL1L3', 'ABLIM1', 'ANTXR1', 'GOLGA2P5', 'SERPINH1', 'DIP2A', 'MRPS35', 'PPY', 'MGEA5', 'PRPH2', 'FAM58BP', 'EIF3F', 'TMEM52', 'CDK5RAP1', 'IHH', 'KLF7', 'CWC27', 'SMN2', 'SCEL', 'CSF2RA', 'FBXO38', 'ABTB2', 'CLEC18A', 'LRPAP1', 'NOP16', 'GHSR', 'SIPA1L3', 'CRTAP', 'THBS4', 'TBL1X', 'VWC2', 'FAM83D', 'SCUBE1', 'KLF1', 'SNRNP25', 'CIZ1', 'PRPF8', 'PAPOLB', 'PAPL', 'METTL3', 'ADORA2A-AS1', 'FAM99B', 'C1ORF174', 'CABLES1', 'POM121C', 'ZBED4', 'GPM6B', 'CT45A2', 'SLC27A1', 'ZUFSP', 'RANBP1', 'KCNJ9', 'OR4P4', 'FKBP11', 'HSD11B1', 'CGGBP1', 'PPP2R3B', 'EPHX2', 'C5ORF51', 'DTX2P1-UPK3BP1-PMS2P11', 'TPRG1', 'COX8C', 'CEP112', 'ADAMTS14', 'SPTB', 'SHOX', 'FUNDC1', 'GRAMD3', 'FAM214B', 'PAX2', 'BRMS1L', 'TMEM241', 'SLC24A5', 'MGMT', 'LIMS1', 'ZDHHC8', 'PITX1', 'PTPRM', 'RASA4CP', 'NTRK3', 'POLR2J3', 'JMJD4', 'AMER3', 'FAM66E', 'SOCS7', 'RALGAPB', 'SOGA1', 'TMED5', 'ZNF638', 'HS3ST5', 'BOLA2', 'LRRC69', 'NAPG', 'IFIT1', 'SLC4A7', 'MT1DP', 'OTOP3', 'ZNF124', 'TTC3', 'TFIP11', 'SSC4D', 'SPRN', 'CLDN7', 'EIF4EBP2', 'FBXL15', 'PDIA2', 'ZNF827', 'CHMP5', 'NME8', 'APLF', 'CYP39A1', 'MKS1', 'ADAMTS9', 'PCDH10', 'SSR1', 'KBTBD8', 'ZNF385D', 'MED13', 'GHRLOS', 'CFAP57', 'TTLL2', 'DAB2', 'SLC25A20', 'PPBP', 'CFAP70', 'MEIS3P1', 'ASPHD1', 'SNORD97', 'WNT10B', 'LOC644145', 'AIRE', 'TTC22', 'ASCL1', 'RAB27B', 'NMNAT1', 'CYP46A1', 'ZNRD1', 'SNORD18A', 'NCKAP1', 'CES1P1', 'ZNF564', 'PVRL1', 'RBM48', 'NUDT15', 'NOXO1', 'SPICE1', 'NEMF', 'IGFBP6', 'GRWD1', 'BMI1', 'RPL12', 'LIG1', 'HOXC4', 'LOXL2', 'MRPL50', 'NEFH', 'SCN4A', 'DDX23', 'FOXD4L5', 'CDH26', 'CHD1L', 'DIRAS1', 'NR1D1', 'MIR1-1HG', 'FAXDC2', 'ADAM21P1', 'ACRC', 'MTMR11', 'PUM2', 'TANGO6', 'HELT', 'KIAA1919', 'DCTPP1', 'PRTFDC1', 'C6ORF52', 'P2RX6', 'TDG', 'HAR1A', 'WHSC1L1', 'GEMIN8P4', 'GLIPR1L2', 'KRTAP4-9', 'ZNF586', 'TRMT2A', 'TSGA13', 'MYOT', 'RPS19BP1', 'TM7SF3', 'CCDC159', 'STAG3L1', 'ABCB1', 'MARK2', 'KRTAP5-AS1', 'ITGB5', 'BAALC', 'SLC39A3', 'ZGLP1', 'SNORD115-45', 'PRKAA1', 'CD8B', 'EXOC8', 'CA1', 'SNAR-D', 'OR51B6', 'LYPD3', 'OTOA', 'MYPOP', 'ZNF283', 'RBM24', 'RGS7BP', 'FLG', 'MEX3B', 'STRA6', 'MRPL32', 'TMEM184C', 'SLC27A4', 'CAND2', 'PCDH19', 'FGD5', 'ANKRD50', 'TNRC6A', 'TBC1D31', 'C17ORF64', 'RUNDC1', 'SNORA14A', 'TRAF1', 'STH', 'WIPF1', 'B9D2', 'KRT1', 'FGFBP2', 'LINC01089', 'TSPY4', 'IFT81', 'ARHGAP21', 'IQCF2', 'DCTN3', 'ST7', 'OR10A5', 'ERN2', 'OR4C16', 'TMEM223', 'COX19', 'SPEF1', 'NTPCR', 'PAPOLA', 'ASPH', 'APOOL', 'NUSAP1', 'LINC00928', 'DUSP6', 'EDDM3A', 'CABP1', 'WDR11', 'CRCT1', 'APOBEC1', 'MALAT1', 'NDN', 'DOC2B', 'LRRC41', 'KRTAP19-7', 'ACAP3', 'SLC22A7', 'MYH1', 'DYX1C1', 'RRAGA', 'FAM153B', 'FAM57B', 'MTTP', 'TSLP', 'MAPK10', 'ITGAV', 'SUMO2', 'KCTD7', 'LOC285768', 'STARD8', 'PTGER2', 'HTRA3', 'KIAA1328', 'H2AFZ', 'SLC14A1', 'BSCL2', 'FYTTD1', 'KIAA1033', 'NEDD4', 'NME1', 'CFL1', 'SUN5', 'GSG1', 'SIGLEC11', 'LINC00652', 'LARGE', 'AHNAK2', 'OSBP', 'RUNDC3B', 'NF2', 'LSM6', 'VAX2', 'S100A16', 'ATP6V0E2', 'FCGR2A', 'MATR3', 'CHID1', 'OR51B2', 'AKR7A2', 'ITGA6', 'ARID2', 'TMEM176A', 'SNAR-F', 'ASIC2', 'SPACA3', 'PKIA', 'GPR32', 'HSPA6', 'SPON1', 'TEX15', 'HIST1H1C', 'STRIP2', 'TAL2', 'RGCC', 'UCHL1', 'ABI2', 'ZBED2', 'RPL28', 'CRYGD', 'C5AR1', 'MED1', 'ACTA1', 'CRB2', 'HCRT', 'TMEM51', 'OR6N1', 'GABRG3', 'INTS4P2', 'ATP1B4', 'ACTR1B', 'LOC100272217', 'CLEC17A', 'ZNF322P1', 'SUGT1P3', 'LPCAT2', 'KIAA0355', 'TGS1', 'FIP1L1', 'NUP205', 'MRPL44', 'OR51A4', 'TMEM190', 'GNG13', 'TSPAN12', 'TRIP11', 'VWA5B2', 'CDKL1', 'OR2A14', 'WTH3DI', 'ARMCX5', 'LARP1B', 'MOSPD2', 'HYALP1', 'FREM2', 'OXT', 'C15ORF39', 'BMPR1B', 'FSTL1', 'RBMX2', 'C15ORF56', 'HSD11B1L', 'CELSR2', 'LMNB1', 'LRR1', 'PRDM15', 'SPACA7', 'UMPS', 'GXYLT2', 'MYO3B', 'SMURF1', 'GATM', 'CGB1', 'FAM63A', 'ATP6V1A', 'HSD17B1', 'KIF4A', 'ZNF274', 'DEXI', 'TSPAN32', 'STAT3', 'FER1L5', 'NKD2', 'ZSWIM2', 'DNAJC4', 'GTF2IRD2B', 'GTF2H2C', 'C1ORF105', 'TRIP13', 'NUP98', 'SYT2', 'GRIN2C', 'PRKCI', 'MMD2', 'C11ORF88', 'HPVC1', 'CDX4', 'RPGRIP1', 'ST8SIA1', 'FCRLA', 'RBFA', 'VAT1', 'TBX18', 'KLHL22', 'C17ORF104', 'ZNF788', 'FAM21C', 'ADORA3', 'ARRB2', 'UBAP2', 'OLIG3', 'RSU1P2', 'TRIM64', 'RPIA', 'ITGA9', 'CANX', 'TAC1', 'SPRR1A', 'EPC2', 'GRIK1', 'ELMOD1', 'STT3B', 'GRAMD1B', 'LPCAT1', 'GYPA', 'KIAA0753', 'AMFR', 'RNY4', 'EEF1B2', 'COA1', 'CERK', 'NXF3', 'LINC00488', 'SLC16A6', 'DRAM2', 'MINA', 'FAM138D', 'SLX1B', 'SFTPD', 'FDX1', 'PSMG1', 'SLC22A4', 'PLA2G7', 'PDLIM3', 'IFT22', 'SYS1', 'TNFAIP6', 'KLRB1', 'FAM66A', 'RABEP2', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 1.3013350075063208e-14 NRMSE: 2.559667599343668e-15 MAPE: 6.034645995987412e-12 Pearson Correlation: 0.05093303317922046 Spearman Correlation: 0.09495629621316976 Coefficient of Determination: -8.632255582004818 RMSE: 1.9024072031202328 NRMSE: 0.6219252682729846 MAPE: 1799.2942148805494 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 1.23935707093417, tolerance: 0.03183156097646061 positive)
Pearson Correlation: 0.9999240383771264 Spearman Correlation: 0.9998879915023048 Coefficient of Determination: 0.999833855709375 RMSE: 0.009914721994539867 NRMSE: 0.001950181352191162 MAPE: 4.041009022411764 Pearson Correlation: 0.02096736765314395 Spearman Correlation: 0.04028229778426165 Coefficient of Determination: -6.811580324251914 RMSE: 1.7132034262226916 NRMSE: 0.5600717337025373 MAPE: 2390.0979919413935 Predictor: RandomForests Pearson Correlation: 0.6368813128739134 Spearman Correlation: 0.6223696497736639 Coefficient of Determination: 0.31516930449467784 RMSE: 0.6365454810847356 NRMSE: 0.12520564144074267 MAPE: 301.0201545078596 Pearson Correlation: 0.13636649706166565 Spearman Correlation: 0.13986458684023495 Coefficient of Determination: -0.03297097707490626 RMSE: 0.6229935389120577 NRMSE: 0.20366587299750158 MAPE: 1334.794944620143 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['HCST', 'RITA1', 'RBM15B', 'PGA3', 'PBLD', 'KRTAP9-2', 'CYB5R3', 'FAM66A', 'OR4C12', 'DTX1', 'CYB5R4', 'CCL24', 'HOXC5', 'CERS1', 'MAPRE2', 'GATS', 'ATG4B', 'SPACA6P', 'ARSH', 'GNG4', 'OSGEP', 'UXT', 'USH1G', 'NALCN', 'MAP3K10', 'SBSN', 'ZNF202', 'SUPT20HL1', 'IL4I1', 'LOC93622', 'LEO1', 'PDS5B', 'RNF217', 'ZNF2', 'FGGY', 'SNORD62A', 'SERPINA13P', 'PNPLA6', 'FERMT2', 'FAM132A', 'RAI2', 'GADL1', 'VSTM4', 'EIF5A', 'LRRN4', 'NEDD1', 'ANKIB1', 'PLOD1', 'PDZD3', 'FOLH1', 'HTRA1', 'NTN3', 'C9ORF129', 'MYCNOS', 'FCRL6', 'HOXA6', 'C10ORF91', 'SLC8A2', 'ADCK3', 'KCNJ5', 'GALNT3', 'LINC01020', 'C5ORF60', 'RBM20', 'ZCCHC14', 'TTC13', 'FBXO27', 'LINC00592', 'LINC01300', 'OR51L1', 'SMIM6', 'FMN1', 'HSDL1', 'PHC2', 'SLC16A12', 'PAXBP1', 'TMEM44', 'CLPTM1', 'HMGB2', 'AGR3', 'DLK2', 'CCDC178', 'ADGRE3', 'TMEM110', 'TMCO5A', 'FAHD1', 'KCNQ4', 'EIF4E2', 'VARS', 'BMP8A', 'GALR1', 'ZNF645', 'NRG3', 'L2HGDH', 'PLA2G2D', 'LRP5L', 'ZNFX1', 'ICAM3', 'PDZD2', 'GALNTL5', 'TMED8', 'DCAF6', 'DEFB119', 'NUDT3', 'CALM3', 'FBXO18', 'CASC4', 'FAM58BP', 'DPCD', 'IFNL3', 'PUS7', 'SLC38A9', 'TRIM25', 'LRRC37A', 'QRFPR', 'ZNF70', 'JUNB', 'CCDC77', 'AMPD3', 'ORMDL3', 'NOXA1', 'AKAP12', 'PKN2', 'C9ORF89', 'ZNF398', 'NHLRC1', 'OR6C68', 'GLTSCR1L', 'C1ORF112', 'LOC728613', 'BAZ2B', 'SKA3', 'SUCNR1', 'SEPHS2', 'AOAH', 'NPAS1', 'INSRR', 'SDC1', 'MAGEB16', 'MEF2BNB-MEF2B', 'CLPS', 'TRIM35', 'GDAP1L1', 'GRAMD3', 'DDX28', 'TMEM56', 'NKAIN1', 'DMRTC1B', 'BRINP1', 'SP110', 'C19ORF45', 'C19ORF38', 'MS4A14', 'VPS37B', 'IL17D', 'KCNV2', 'CROCCP3', 'MUC6', 'FBXL16', 'HPVC1', 'FAM197Y2', 'ATP5G3', 'EXOC2', 'MOCOS', 'LCN9', 'HSP90AB1', 'PPIAL4E', 'TRIM36', 'KLF17', 'SNORD115-31', 'GOLGA2P5', 'HSPA1L', 'SFXN5', 'RANBP3L', 'LINC00114', 'GULP1', 'CD180', 'LCE1A', 'PDX1', 'RNFT2', 'SGOL1', 'DEGS1', 'CRTC3', 'PRDX2', 'PNPLA3', 'RPS6KB1', 'P2RX1', 'MANBA', 'HIST1H1E', 'FAM181A-AS1', 'PLEK', 'LYPLA1', 'RAB19', 'ZNF675', 'SNAP23', 'HHLA2', 'POLR2A', 'SKINTL', 'LGALS9', 'PRDX6', 'NOTCH1', 'LARP1B', 'ZIK1', 'TRIM34', 'IPO5', 'OR51B4', 'FAM188A', 'UBXN11', 'ID2B', 'GSTM2P1', 'ZNF74', 'OR52J3', 'SCARNA12', 'ZNF75A', 'C9ORF156', 'DBF4', 'PPIL2', 'LASP1', 'ST13', 'FMR1NB', 'MEOX2', 'DMXL2', 'RNASE1', 'UBE2D2', 'MSH4', 'FYN', 'CEACAM7', 'KIF25', 'ORAI1', 'HCG4B', 'IGFL1', 'OR13A1', 'TMEM125', 'USHBP1', 'SSR2', 'ZNF429', 'C3ORF17', 'VWC2L', 'CWC25', 'PCNAP1', 'RDH14', 'FAM71D', 'TYMSOS', 'COLQ', 'SUSD2', 'NSMCE2', 'LOC100268168', 'LAMA1', 'ACSF3', 'C4ORF45', 'PSMB8', 'ZNF688', 'TRIM9', 'COBLL1', 'ATP8A1', 'KRT27', 'RNASE2', 'TIMP2', 'ZFP36', 'LMBRD1', 'CD63', 'TTTY9B', 'OSBPL1A', 'KRT78', 'SCIMP', 'BRK1', 'MTHFD1L', 'SUN2', 'CAPZA3', 'APOF', 'ST5', 'TSPY4', 'CHRAC1', 'SERPINB7', 'SERPINA9', 'AWAT1', 'PYCR2', 'GPR161', 'DCDC1', 'ABCC6P2', 'ACACA', 'TAAR2', 'CCBL1', 'BAHCC1', 'FOXP4', 'PCDHB15', 'USH2A', 'PNCK', 'FJX1', 'CYP3A4', 'CD99', 'ECH1', 'MEGF9', 'MFRP', 'TXNRD1', 'CDC26', 'NPY6R', 'MRPL37', 'GTF2F1', 'ADGRB3', 'FBXO34', 'SP7', 'NEFH', 'VASP', 'NUTM2A-AS1', 'POU4F2', 'PIGL', 'SLC25A12', 'ZBTB38', 'CLEC18C', 'ESYT2', 'VPS4A', 'ACTN2', 'COLGALT1', 'SPATA24', 'UBQLN1', 'FOXA3', 'ABL2', 'SYT12', 'TGM7', 'LIMCH1', 'SLC16A1', 'SNORD33', 'GUCY1A3', 'GSTA5', 'PCF11', 'JAM3', 'C1QTNF9B-AS1', 'WDR33', 'MAFG', 'RNF19A', 'SPCS3', 'SMCP', 'CYTIP', 'MTMR10', 'RNPEPL1', 'MFSD9', 'SPERT', 'MYBPHL', 'NOA1', 'SUPT16H', 'BPTF', 'MYO1C', 'PTCHD3P1', 'CKAP2', 'OXR1', 'ANP32AP1', 'SPDYE1', 'MMP16', 'ATG16L1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.9624256555793649 Spearman Correlation: 0.8696992302180503 Coefficient of Determination: 0.9262631425173709 RMSE: 0.14186151224945046 NRMSE: 0.034235468844136994 MAPE: 31.538289609670755 Pearson Correlation: 0.4178648246862214 Spearman Correlation: 0.32770234042818486 Coefficient of Determination: -4.716853419406921 RMSE: 0.8724466155636811 NRMSE: 0.3800351158965375 MAPE: 177.26401008942872 Predictor: ElasticNet Pearson Correlation: 0.9529417972738475 Spearman Correlation: 0.8454040211358144 Coefficient of Determination: 0.9080371317056535 RMSE: 0.1584267550173875 NRMSE: 0.038233162395295874 MAPE: 35.424032040239524 Pearson Correlation: 0.5507648341459936 Spearman Correlation: 0.37277522163618 Coefficient of Determination: -1.0411723946680893 RMSE: 0.5213149467137541 NRMSE: 0.22708321937263323 MAPE: 148.6670550747791 Predictor: RandomForests Pearson Correlation: 0.8643266368514518 Spearman Correlation: 0.72737202146597 Coefficient of Determination: 0.7432265395844614 RMSE: 0.26472645236189846 NRMSE: 0.06388649090472245 MAPE: 55.493197522119544 Pearson Correlation: 0.7767961495752354 Spearman Correlation: 0.6683399939741601 Coefficient of Determination: 0.5532203641464355 RMSE: 0.24389731463232933 NRMSE: 0.10624093506657199 MAPE: 77.53193628570807 Protein: CCND1 x_train_column_count: 859 x_train columns: ['PHOX2B', 'ITIH2', 'C12ORF76', 'C14ORF80', 'HS2ST1', 'GUF1', 'HIST2H2BA', 'CEL', 'SLC25A5-AS1', 'PIK3CD-AS1', 'DAB1', 'ZFYVE9', 'DKC1', 'LIX1L', 'CA5BP1', 'F2RL1', 'WDR33', 'BRD7', 'PSMA2', 'CUZD1', 'CCL18', 'NOL4', 'OR8G2', 'MIB2', 'NLGN4X', 'TAF6L', 'GDI2', 'C19ORF45', 'RSAD1', 'RWDD3', 'SLC7A11', 'RPRML', 'GABRP', 'OR10J3', 'CDS1', 'IRF2BP2', 'EXOC7', 'CST2', 'ABHD11', 'PGK1', 'WBP5', 'STK19', 'SAT2', 'CSNK1A1P1', 'DUSP23', 'MLLT6', 'IGSF22', 'FBXL20', 'ZWILCH', 'OIT3', 'CCDC176', 'CST5', 'BCYRN1', 'SCGB2A1', 'PRDX2', 'MBD3L1', 'ZNF543', 'NEGR1', 'CYP4F3', 'GEMIN6', 'VGLL1', 'H1FNT', 'TAP2', 'LRRFIP1', 'SHCBP1', 'LOC401127', 'CCDC107', 'SNORD114-16', 'PLB1', 'SEC61G', 'ROPN1', 'DEFA1B', 'PCDH7', 'TRIM78P', 'PPP3CB', 'POTEF', 'XYLB', 'TPD52', 'HSD17B4', 'THBS2', 'CHPF', 'PCDHGA1', 'CFAP57', 'NUB1', 'TTC28-AS1', 'METTL13', 'COX7B2', 'PBLD', 'HTR7P1', 'SYTL5', 'SEC22A', 'CRYGA', 'RASSF1', 'ATP1A1-AS1', 'MTHFD1L', 'BBOX1', 'TRAPPC5', 'ZBTB5', 'INS-IGF2', 'GRIA1', 'OR5B2', 'DNAH3', 'C9ORF50', 'CLK4', 'DOCK11', 'SNORA28', 'SNORD66', 'VBP1', 'DFNB59', 'GOLGA3', 'PSMD9', 'SEH1L', 'C7ORF50', 'TNS4', 'ERCC1', 'DGKI', 'ZNF385A', 'LRRC25', 'PABPC4', 'RAP2C', 'MIER2', 'STK26', 'PFKFB3', 'PCDH11Y', 'RBP1', 'FAM182A', 'AP1S3', 'EDRF1', 'TSPAN33', 'HCCS', 'STX3', 'THAP10', 'RNF114', 'CAP1', 'EPS8', 'OS9', 'ZNF674', 'GPX8', 'GRB2', 'TMPRSS2', 'C1ORF204', 'ZDHHC17', 'TCF7', 'PVRL2', 'COG1', 'OTOP2', 'HES2', 'TTC9C', 'ZNF263', 'SUOX', 'KRT9', 'ZNF717', 'TONSL', 'THUMPD2', 'LINC00982', 'ZNF24', 'ZMYND10', 'LIPG', 'EXTL2', 'GID8', 'CHRNA4', 'MKNK1', 'GNG12', 'RDH10', 'ZNF750', 'PIK3C2G', 'SEPT1', 'P4HTM', 'PTPRR', 'GAK', 'UBE2MP1', 'ITGB4', 'C20ORF194', 'ZNF593', 'SRCAP', 'TMEM230', 'FES', 'MAPKAPK5', 'AQP3', 'RAD1', 'OCA2', 'CD40', 'ERBB2IP', 'RALGDS', 'CLTA', 'C1QL1', 'SPOCK1', 'RAD51B', 'GATM', 'RBPMS2', 'ZNF767P', 'VDR', 'PHKB', 'FIZ1', 'NXF1', 'VIT', 'SRP72', 'ARHGEF1', 'OAZ3', 'FAM83A', 'CPNE5', 'CIDECP', 'ESF1', 'MT4', 'SOX15', 'CHIC1', 'KIAA1755', 'HIST1H4C', 'IL4R', 'SERPINE2', 'FAM208B', 'NBPF22P', 'FAM96A', 'SNORD126', 'SWI5', 'TSIX', 'OR56A3', 'ZNF714', 'OSGEP', 'F2R', 'NAA15', 'ARHGEF3', 'PRMT9', 'NACC2', 'IWS1', 'IL12B', 'UBXN10', 'PAPOLB', 'PSMD12', 'FUBP3', 'TMEM182', 'NANOS3', 'HBG2', 'RPL6', 'SEMA3D', 'CCNB1IP1', 'SNORD86', 'DCUN1D4', 'SERPINB6', 'LRRC70', 'PTPRS', 'NAA30', 'WNT8A', 'CDK16', 'MTMR4', 'TEX13B', 'CCDC65', 'MAP1B', 'DHRS7', 'CYP17A1', 'TRIM9', 'SMG8', 'TADA2A', 'NUDT13', 'ALG3', 'CDC45', 'CC2D1B', 'C4ORF45', 'INPP5D', 'MED13', 'RGS9', 'IFNLR1', 'OR2C3', 'BRDTP1', 'KIF18A', 'PTGES3', 'STC1', 'CDC42SE2', 'ULK4P3', 'MAZ', 'AGMAT', 'BPIFC', 'SMARCA1', 'TOE1', 'GCAT', 'CXADRP2', 'LHX2', 'ROBO3', 'KRTAP12-1', 'FLYWCH2', 'C1QL3', 'SNORD81', 'LIN7A', 'KCNK12', 'OR2L2', 'SMAD9', 'AKAP10', 'ATP5L', 'SERPINB2', 'C1ORF110', 'RCVRN', 'CSGALNACT2', 'FOXR1', 'RABL2A', 'C21ORF62-AS1', 'ZNF331', 'DPY19L2', 'PFN1P2', 'TFAMP1', 'OR10R2', 'LYZL6', 'EDDM3B', 'PMS2P3', 'GFI1', 'RNASEH2B', 'SLC7A7', 'SKINTL', 'ZNF333', 'SPTSSB', 'MUC16', 'RAB39B', 'APOLD1', 'MIR1-1HG', 'OR10P1', 'MX2', 'GPR176', 'ZNF786', 'CLCN1', 'IGFLR1', 'ZBTB20', 'LEO1', 'OR5M9', 'STAC3', 'TMEM120B', 'CX3CR1', 'C11ORF74', 'SMIM20', 'WDR64', 'ANKRD28', 'CCDC7', 'ARID1A', 'NR1H2', 'BCAS4', 'PGC', 'RCN3', 'KDR', 'TMED1', 'DGCR2', 'RUVBL1', 'PGK2', 'LINC00152', 'CACNG5', 'GTF2A2', 'FTMT', 'ZACN', 'C1GALT1C1', 'PAX8-AS1', 'OSCP1', 'TPRA1', 'ARL15', 'AGR3', 'SNORD114-30', 'FCGR2C', 'ZBP1', 'ANXA2P2', 'HDC', 'CNPY4', 'ARL4D', 'CCDC183-AS1', 'TMEM8A', 'EVI5L', 'LOC613037', 'KRIT1', 'GDNF', 'KPRP', 'CLDN2', 'AGBL4', 'C10ORF67', 'SNORD111B', 'P2RY2', 'ZNF426', 'GYPA', 'GCSAM', 'SETD6', 'CLU', 'AMPH', 'TBC1D5', 'TMEM256', 'METTL18', 'TAS2R13', 'EXOSC7', 'TACC2', 'LIMS2', 'GAGE8', 'IER5', 'SP1', 'ADORA2B', 'SNORD85', 'SUGP1', 'PRAMEF20', 'SCGB3A2', 'LHFPL3-AS2', 'MMP15', 'KRTAP20-4', 'DCDC2B', 'HAL', 'FAM63A', 'XIAP', 'KLHL34', 'EPS8L3', 'RGS20', 'ZNF789', 'TNFRSF4', 'PDE1B', 'HEATR1', 'GREB1L', 'TMIGD2', 'HADHA', 'ZNF572', 'PSMA1', 'LGALS9C', 'SYT5', 'CRIP2', 'SS18L2', 'FAM66D', 'SCARNA8', 'LBX2', 'CALR', 'SRSF11', 'BIN3-IT1', 'LIPF', 'OPN1MW', 'RCAN1', 'RAB5C', 'JAM3', 'YEATS2', 'DNAJA1', 'TREX1', 'SPATA31A5', 'MRPS33', 'DHRS9', 'ATRIP', 'RAD9A', 'YY2', 'C15ORF62', 'PEX16', 'KCNAB2', 'UBA6', 'FAM175B', 'RPP14', 'TCAF1', 'FAM131B', 'PRELID1', 'CATSPERG', 'SPAG8', 'ZNF645', 'GSTO1', 'PRKCE', 'EPHB3', 'SNORA53', 'MATR3', 'SELM', 'SNORD115-44', 'TBX15', 'XPO5', 'CYP1A1', 'NGRN', 'CLN6', 'ARFIP2', 'HSPA1B', 'IDS', 'APOC1P1', 'AP3D1', 'EIF2S2', 'ERMARD', 'OR6K2', 'ILF3', 'RPRM', 'TMEM98', 'ZNF292', 'RITA1', 'OTOR', 'OR10H2', 'SLC25A28', 'MSTO2P', 'ARL14', 'ANKRD35', 'PTTG2', 'PPIL6', 'SNORD116-11', 'RERGL', 'ADCY2', 'UBE2D1', 'DIAPH2', 'MDFIC', 'KRT73', 'PILRB', 'SLC22A25', 'PRCD', 'EPHX3', 'MAN1C1', 'CYSLTR2', 'FAM184A', 'CPTP', 'OR4N5', 'KNG1', 'CSTA', 'OR4C6', 'CLEC2L', 'ELMOD1', 'ARPC2', 'G3BP1', 'ISY1', 'TSNAXIP1', 'PPP3CA', 'ARMCX1', 'TOP1P1', 'FCRLA', 'PCDHB7', 'CAMSAP3', 'SAP30BP', 'SPRR2C', 'CDNF', 'FPR3', 'IKZF2', 'CEP83-AS1', 'PEX11A', 'NRM', 'LINC00910', 'CP', 'CHRNA1', 'FRYL', 'RAB35', 'ANKRD22', 'TNXB', 'STIM2', 'OR2C1', 'CLIC5', 'MAP4K3', 'RAN', 'TSSK1B', 'ADAMTSL5', 'POLR2I', 'PPAPDC1B', 'SLCO2A1', 'GPR68', 'PPP1R26', 'SPEN', 'GTDC1', 'LRRC45', 'DEFB132', 'MAPK10', 'RNFT2', 'RAP1GAP2', 'PALMD', 'CLPS', 'PPP1R14A', 'POSTN', 'NEMF', 'KRT82', 'ELOF1', 'CDC6', 'SNORA30', 'NPS', 'CCDC36', 'HIST1H4L', 'C10ORF131', 'GSE1', 'MEFV', 'CREBZF', 'PCDHB8', 'IL2RA', 'ITGA9', 'SEMA5B', 'GDF2', 'HPDL', 'PIM2', 'GNA11', 'LSM3', 'UGGT2', 'AURKB', 'ZNF436', 'ID2B', 'ZKSCAN1', 'RFX5', 'PRSS57', 'WEE2-AS1', 'WBP1L', 'SRSF1', 'SNORD115-45', 'CKMT2', 'RBM26', 'BDKRB2', 'CDKL1', 'TP53I13', 'TNFRSF13C', 'TECTB', 'TTLL5', 'ABHD17C', 'TCAF2', 'ZNF577', 'PRCP', 'NACAP1', 'IDH1', 'RPL21', 'HAND2', 'PCSK6', 'FBXL8', 'NRADDP', 'CD274', 'B4GALNT2', 'PEG10', 'LSM6', 'CDC37', 'ZW10', 'CRCP', 'SLC17A4', 'DGKA', 'LRRC6', 'FAF1', 'HRNR', 'EMC6', 'STYXL1', 'G6PC3', 'EFHD1', 'PDGFA', 'LOC344967', 'SYNJ2', 'MTX2', 'CSTF2T', 'COL21A1', 'CD3EAP', 'FAIM2', 'IFNK', 'GRM6', 'ATP1A4', 'PTRH1', 'LRRC47', 'CIAO1', 'RTN3', 'ZFYVE28', 'ANKRA2', 'ODAM', 'MAB21L2', 'MAATS1', 'PABPC5', 'RPS7', 'COQ9', 'DERL2', 'CENPK', 'EIF5B', 'BPIFB3', 'TNFRSF13B', 'KHDC3L', 'C4ORF17', 'ARNTL2', 'ZUFSP', 'EPB41L4B', 'PRR14', 'TSR1', 'NCR2', 'MRGBP', 'IRGC', 'PSMA6', 'SH3RF1', 'CA9', 'EPHA3', 'ST13', 'GCNT1', 'SPACA6P', 'FBLN1', 'POLR3H', 'UGT2A3', 'IFNB1', 'TUBB2A', 'SUSD5', 'TSEN54', 'GCLC', 'RNMT', 'MESDC1', 'NICN1', 'GCA', 'GALP', 'RNF150', 'PECR', 'GOLGA8A', 'LINC00242', 'VEGFC', 'TSPAN3', 'MGC72080', 'SNORA31', 'ZNF221', 'DNAJB11', 'SNORD17', 'PACSIN1', 'ARHGAP18', 'SNORD115-32', 'RASGEF1A', 'OGFOD1', 'BTBD17', 'PYCR1', 'HLA-DRB1', 'SPRY2', 'LOC389705', 'RAB38', 'DBF4', 'ATP5O', 'CLEC11A', 'EVL', 'ALDOB', 'SNRPE', 'HOXC12', 'SPRR3', 'PATE4', 'KLC3', 'BCL10', 'TBC1D25', 'IL9', 'PFDN2', 'TNMD', 'LGALS14', 'UBQLNL', 'ZSCAN10', 'CT45A2', 'MGST3', 'SEPT10', 'FCGR1A', 'POM121L2', 'LOC389332', 'ETAA1', 'C9', 'ADGRE4P', 'C1QTNF2', 'KRT6A', 'SLC25A23', 'SH2D4B', 'MAN2B2', 'GRIA3', 'TSHR', 'MAT2B', 'ELOVL2', 'SYCP3', 'PTPRO', 'ADRM1', 'WDR47', 'MAP3K4', 'ZNF585B', 'POU6F2', 'MRPL55', 'C3', 'ZNF800', 'BCLAF1', 'FAM217B', 'DDAH2', 'BIVM', 'C4ORF48', 'KRT31', 'GPN2', 'IRF9', 'FAM195B', 'IRF7', 'LRRC71', 'RPP25L', 'SPRR2F', 'DNMT1', 'AFG3L1P', 'HS3ST5', 'FAM150A', 'C8ORF86', 'RSPO4', 'PPP1R3F', 'ZNF253', 'SIRPA', 'RALGAPB', 'IFITM2', 'SOCS1', 'LIMD1', 'NFS1', 'LOC284023', 'AMPD2', 'COA3', 'HSPA12B', 'YBX1', 'DDX27', 'NMB', 'MED6', 'SEMA3F', 'PABPC3', 'PRKAB2', 'C1ORF226', 'BCL11B', 'TSPYL4', 'NDUFA7', 'GABPA', 'C19ORF12', 'SDC4P', 'ICE1', 'CWC27', 'SNORD27', 'DIP2B', 'CAPZB', 'GPD1L', 'MEG8', 'PAPLN', 'RHPN2', 'NR0B1', 'L3HYPDH', 'PLAT', 'B3GNT9', 'MSX1', 'PDK3', 'MCM2', 'SPTBN4', 'COL7A1', 'KIAA1257', 'SIRT2', 'PGAP2', 'CD33', 'MS4A13', 'SLC25A20', 'LRRK2', 'CARTPT', 'IL6ST', 'CCDC64', 'ATP6V1G1', 'KBTBD7', 'KCNC1', 'FBF1', 'FAM150B', 'FAHD2CP', 'PCNA', 'C12ORF73', 'SNORD38B', 'EPS15L1', 'EBPL', 'UFC1', 'YEATS4', 'STH', 'BOC', 'PDC', 'C3ORF38', 'ZNF814', 'LOC145474', 'HMP19', 'INMT', 'PWAR1', 'SCARB2', 'NLRP4', 'SNORA71B', 'UBN2', 'DHX37', 'MED17', 'NAIP', 'HAND1', 'TRAP1', 'NRIP2', 'IGF1R', 'PLBD1', 'TUBBP5', 'HDAC5', 'PSMD14', 'ZNF835', 'SEPT7P9', 'PCGF2', 'FHOD3', 'MUTYH', 'ERBB4', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.1566164652503188e-14 NRMSE: 6.953243710249479e-15 MAPE: 2.700700720312423e-11 Pearson Correlation: 0.0054250058155723615 Spearman Correlation: -0.03698051097893989 Coefficient of Determination: -22.89187802950672 RMSE: 1.0251928307394482 NRMSE: 0.971442895340271 MAPE: 1763.5512641185237 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.43441921127752525, tolerance: 0.0032202923923696524 positive)
Pearson Correlation: 0.9989159735340938 Spearman Correlation: 0.9984208805721072 Coefficient of Determination: 0.997707515367767 RMSE: 0.011714121701042865 NRMSE: 0.007042191209101049 MAPE: 28.819512276627634 Pearson Correlation: 0.002881465443218141 Spearman Correlation: 0.03022232197408946 Coefficient of Determination: -27.27097701149108 RMSE: 1.1151950285524357 NRMSE: 1.0567263591032525 MAPE: 1742.6201829950248 Predictor: RandomForests Pearson Correlation: 0.5790845078341315 Spearman Correlation: 0.5676563967745484 Coefficient of Determination: 0.2827167477887811 RMSE: 0.2072057774430075 NRMSE: 0.12456612127003855 MAPE: 488.95958960728194 Pearson Correlation: 0.41383868974989385 Spearman Correlation: 0.43620244641454387 Coefficient of Determination: 0.1599099715827913 RMSE: 0.19223981103023785 NRMSE: 0.18216085113683667 MAPE: 304.9747033911145 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['CRABP1', 'C3AR1', 'MED30', 'ZNF804B', 'BEAN1', 'GDF6', 'CELSR2', 'CPLX3', 'GPR4', 'C16ORF54', 'CLP1', 'LINC01555', 'OR51E2', 'SRSF12', 'CACTIN', 'FANCM', 'CHTOP', 'PFN4', 'LYZL4', 'SLC13A5', 'SMNDC1', 'NETO1', 'LINC00643', 'MORF4L1', 'CDC37L1', 'ZFYVE21', 'C14ORF166', 'CAPN10', 'GPA33', 'ELOVL2', 'FLJ16779', 'GRIK2', 'CLGN', 'AJUBA', 'EMC6', 'KRTAP13-1', 'EPC2', 'ARHGAP30', 'KRAS', 'TMCO5A', 'ABCC6P2', 'DEPDC5', 'ENSA', 'SAR1B', 'C7ORF43', 'ANAPC16', 'ARCN1', 'OR13A1', 'HBA2', 'ALCAM', 'CYMP', 'AP2S1', 'HOXD12', 'SREK1IP1', 'CLPP', 'CLIP2', 'EXOC3-AS1', 'XIST', 'UBQLN4', 'RHBDF2', 'DPP10', 'DCDC1', 'KRTAP1-3', 'TNFSF14', 'RPS6KA3', 'USP12', 'RRBP1', 'AKT3', 'ARAP3', 'NCKIPSD', 'TNFRSF6B', 'MLYCD', 'PARPBP', 'MED12', 'TMSB4Y', 'HRSP12', 'SLC4A1AP', 'TLX1', 'EGF', 'DTNBP1', 'FAM214B', 'TUBA1C', 'KPNA7', 'SNX2', 'MAGEA1', 'ZSCAN32', 'LOC340017', 'BMP7', 'GPI', 'SNCG', 'METRN', 'VPS29', 'BMP5', 'KIAA1875', 'GFM2', 'RHBDF1', 'RPS5', 'KCNJ14', 'ZMYM5', 'ZNF587', 'AFF1', 'ZNF408', 'RBP1', 'ARX', 'TPTEP1', 'CROCCP2', 'IFRD1', 'C12ORF77', 'RASSF8', 'FARS2', 'EPOR', 'ZFP14', 'CSN2', 'CDRT1', 'SDHAP3', 'CYP2D6', 'CEBPA-AS1', 'OR11L1', 'NRP2', 'LOC100132215', 'ZC3H11A', 'MAP3K19', 'CASP6', 'SNORA49', 'MGMT', 'ATP5J2', 'LOC90784', 'ZNF395', 'ZDHHC17', 'HCFC2', 'CDH17', 'TULP2', 'AGR3', 'CABP5', 'VTRNA1-1', 'VTN', 'COL26A1', 'ITPK1', 'ISCA2', 'CHRNG', 'KLHL35', 'GPR45', 'CD59', 'LOC440173', 'NCF4', 'CXCL3', 'MAS1L', 'CLEC4C', 'TRIM61', 'SRP14P1', 'MBD1', 'ANKIB1', 'SERTM1', 'WDR13', 'TNNT2', 'OPN1LW', 'NME3', 'DEPDC1B', 'HLA-DPB1', 'DET1', 'GPR61', 'VPS28', 'SLC27A4', 'EXOC7', 'SNORD115-2', 'RNF20', 'HDC', 'SPCS3', 'TEX14', 'SEC23B', 'BOLA2', 'HDAC2', 'VWA5A', 'BLM', 'RNPEPL1', 'PRAMEF17', 'A2M-AS1', 'CPTP', 'NGFRAP1', 'REM1', 'CLDN8', 'SORL1', 'POU2AF1', 'MAML2', 'NUP153', 'CEP170B', 'RPS26P11', 'LRGUK', 'TMEM86B', 'CCDC113', 'TMC6', 'FADS1', 'MAB21L3', 'SNORA23', 'C12ORF43', 'AIM1', 'SPTBN2', 'PAX1', 'FAM189A1', 'USP25', 'LINC00882', 'COMMD8', 'FAM9C', 'ZNF841', 'INO80', 'KDM8', 'CLIC4', 'GJA9', 'ZP1', 'EIF1AX', 'PDCD2', 'NAA38', 'CDCA5', 'GCNT2', 'OR2L2', 'ZKSCAN7', 'IRX1', 'TRAF5', 'KRT23', 'SSR4', 'FERMT3', 'STRA6', 'TBC1D3P1-DHX40P1', 'ARMS2', 'IGIP', 'KRTAP17-1', 'CDH16', 'ATXN1L', 'MRPL23', 'FAM66E', 'SLC28A1', 'MTERF3', 'CIITA', 'TMC1', 'INGX', 'GATA1', 'ZKSCAN5', 'GOLGA8IP', 'DYNLRB2', 'VCAN', 'HIPK1', 'GPR141', 'KLHL3', 'C10ORF95', 'CEACAM18', 'KALRN', 'FAM126B', 'PROZ', 'NF2', 'NAGK', 'PEX6', 'COL1A1', 'MB21D2', 'SP110', 'NUCB1', 'SUPT20HL2', 'ATRX', 'FOXL2', 'THG1L', 'PSME1', 'ARV1', 'RAB42', 'IL7R', 'SDR42E1', 'C6ORF47', 'ERH', 'YAF2', 'DYX1C1', 'IL23R', 'PYGM', 'RNASEL', 'ICAM3', 'SNX15', 'KLRG2', 'HPVC1', 'PTTG3P', 'TNIP3', 'ENOSF1', 'KRT13', 'TAF1', 'RBM41', 'KCNV1', 'MT1E', 'FOXB1', 'GBX2', 'CCP110', 'NOVA2', 'GGA3', 'AUTS2', 'OR1J2', 'SERINC5', 'COPS7B', 'MRPL4', 'INPP5D', 'TTC17', 'ETV6', 'C3ORF20', 'KIAA0895L', 'PRKD3', 'ZNF772', 'CMAS', 'FN3KRP', 'SNHG15', 'ELAVL1', 'IGF2-AS', 'INSL4', 'PCGF5', 'XPOT', 'HSD3B2', 'SNORD19', 'KLHL8', 'LY6G6F', 'GKAP1', 'EIF3D', 'TUSC5', 'FAM171B', 'GAB2', 'TMEM31', 'SLC8A2', 'ARHGAP9', 'DGCR5', 'SRRM1', 'BAX', 'KCNB2', 'SEPT12', 'ARL1', 'KLK4', 'CYB5D2', 'APOBEC4', 'NKX6-2', 'PAX8', 'MSTO2P', 'TNS2', 'C9ORF139', 'OR9I1', 'MTM1', 'WRAP53', 'ZBED3', 'TTBK2', 'PTPMT1', 'TECPR1', 'KDM6B', 'USP16', 'HRNR', 'YTHDF2', 'TPD52L3', 'LYRM7', 'OR4D2', 'SLC44A2', 'RPL36', 'TMEM107', 'OR10W1', 'CHN2', 'C19ORF57', 'HSPB6', 'MCRS1', 'SNORA66', 'RPAIN', 'FSCN3', 'C22ORF39', 'PAPOLB', 'KIAA1191', 'MMD', 'LINC00628', 'FAM107A', 'CYP1A1', 'JMJD6', 'CCDC137', 'POLR2A', 'TAOK2', 'SIGLEC12', 'SNORD49B', 'RFPL3', 'TMEM189-UBE2V1', 'PI15', 'OR6K6', 'HAO1', 'ANKRD36', 'RORB', 'PROCR', 'ADGRG5', 'CCL8', 'ZDHHC16', 'GNL3L', 'LRRC14B', 'PIF1', 'DHX33', 'ZBTB38', 'AIFM2', 'NPR2', 'S100A5', 'ZNF20', 'MLH3', 'EBI3', 'SFMBT2', 'RGS9BP', 'STOX2', 'MMACHC', 'OR14A16', 'NACC1', 'APOA4', 'ATM', 'LINC00112', 'SCARNA18', 'ARRB2', 'PAPOLG', 'C1ORF61', 'TAS2R8', 'PTCHD3P1', 'NTN4', 'MTHFSD', 'NR1I2', 'PTPRCAP', 'SATB2-AS1', 'RNF126', 'SMCHD1', 'MYO18A', 'SLC43A1', 'HAO2', 'RDX', 'SNORD23', 'CCDC102A', 'COLEC12', 'DPH3P1', 'UNC5D', 'FZD10', 'SEPN1', 'BMP10', 'STAG3', 'NDUFA1', 'CTH', 'UMPS', 'UGT2B10', 'ART5', 'WASF3', 'TET1', 'APBB1IP', 'ZHX1', 'CNTROB', 'ELF5', 'TRMT13', 'RPL28', 'KIF3B', 'PGA5', 'AS3MT', 'C2ORF57', 'MRPL51', 'TBC1D2', 'MRC1', 'MMS22L', 'WDR5B', 'TRIM6', 'METTL22', 'TONSL', 'OR52A5', 'MND1', 'PROK1', 'NOL11', 'C12ORF4', 'TMEM220', 'METTL24', 'SPC25', 'DNMBP-AS1', 'BLID', 'SMEK3P', 'MUTYH', 'CAPZA2', 'NCOR2', 'EXT2', 'CD47', 'LYL1', 'KLHL4', 'PRIM1', 'ALDH1L2', 'PRPF18', 'VSX1', 'C1ORF162', 'MAP3K10', 'C9ORF72', 'GALNT7', 'DRAP1', 'HKDC1', 'IMMP1L', 'IKZF3', 'IFIT2', 'CD70', 'SMARCA5', 'NKX2-1', 'GTPBP2', 'GEMIN8P4', 'OR51G1', 'SNRPB2', 'CFI', 'SLC39A11', 'BANF1', 'VLDLR', 'MGC16275', 'FBXO24', 'TINF2', 'OSTC', 'TAF13', 'NEUROD1', 'MTNR1A', 'CFAP58', 'CBLB', 'RGL3', 'PIGZ', 'GABPB1', 'FAM45A', 'MMP25', 'DLX6', 'EPHX2', 'FAM160A1', 'SPATC1', 'TWISTNB', 'ZDHHC21', 'SNORD72', 'STK36', 'LOC100129034', 'RNH1', 'BLOC1S3', 'CDK19', 'OR8H2', 'HCN4', 'KRTAP20-4', 'FUT3', 'CLEC1A', 'SDK1', 'WDR18', 'OR6C2', 'SLC17A9', 'MRPL52', 'NINL', 'OR3A3', 'OR6B3', 'IRF8', 'ADGRF4', 'RGS11', 'PEMT', 'FAM127C', 'ZNF43', 'ZMYND19', 'ZNF441', 'FBXO9', 'CDC42EP3', 'GSTA1', 'CGB8', 'LINC00937', 'MIR205HG', 'SLC17A3', 'BTBD2', 'PIP4K2B', 'TPM3P9', 'DENND5B', 'TMEM212', 'SCCPDH', 'LCE4A', 'AKT2', 'FOCAD', 'OPA3', 'OLA1', 'SPIB', 'WDR25', 'MEPE', 'CLDN14', 'PLCL1', 'CACNA1B', 'RGS13', 'GIP', 'SNORD44', 'CALR', 'ECE1', 'RNASE11', 'CRYL1', 'FIP1L1', 'IDE', 'FUT6', 'MRPS9', 'LINC01547', 'WDR27', 'SLC25A35', 'PCDHA8', 'CD200R1L', 'TM9SF1', 'TG', 'P2RY10', 'TRAT1', 'NXF1', 'C20ORF27', 'FAM114A1', 'ZC3H18', 'FAR2', 'BPY2', 'EEF1E1', 'FAM186B', 'TGIF1', 'TMEM63C', 'FAM32A', 'LPAL2', 'SOAT1', 'SNORD115-14', 'MRPL12', 'GIGYF2', 'RBM11', 'EBNA1BP2', 'NANOS1', 'ZFAND6', 'VSIG2', 'RRP1', 'TEX12', 'CDYL2', 'FBN3', 'PSPC1', 'ZNF618', 'SSX5', 'DNTTIP2', 'ST13', 'LINC00410', 'CRISPLD2', 'RHOT2', 'GFPT1', 'QPCTL', 'GOLGA7', 'NKPD1', 'FNDC7', 'C17ORF51', 'GOT1', 'EFR3B', 'FAM181A', 'NPHS2', 'HOXD8', 'TTLL2', 'CBX3', 'PRDX6', 'TEFM', 'FAM69A', 'SCAPER', 'GRK4', 'SDCBP2', 'HLA-J', 'CCL24', 'ZYX', 'RAMP3', 'ITGB3BP', 'CLEC1B', 'HS6ST2', 'GJA10', 'CT45A3', 'ATP5I', 'TMUB1', 'RHBG', 'ARL3', 'NELL2', 'TMEM184A', 'STK39', 'ANKHD1-EIF4EBP3', 'H3F3AP5', 'ZBTB37', 'GBP4', 'SLC6A10P', 'N6AMT2', 'TMEM217', 'VEGFA', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.8256553197599033e-13 NRMSE: 6.517633473192673e-14 MAPE: 2.9647504000828564e-10 Pearson Correlation: 0.3418269306452466 Spearman Correlation: 0.22649687215178912 Coefficient of Determination: -8.051090609081019 RMSE: 3.2086922804578086 NRMSE: 0.5788102100544428 MAPE: 1375.4534702243031 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 3.968832156858779, tolerance: 0.05179983228777935 positive)
Pearson Correlation: 0.9979230616918194 Spearman Correlation: 0.9940972639102078 Coefficient of Determination: 0.9958255070009293 RMSE: 0.0633979051109772 NRMSE: 0.010800876554334498 MAPE: 89.82382013288056 Pearson Correlation: 0.39792640056268536 Spearman Correlation: 0.27920083691942665 Coefficient of Determination: -3.2782490709843577 RMSE: 2.2060260956609095 NRMSE: 0.3979410663938433 MAPE: 757.3440005101208 Predictor: RandomForests Pearson Correlation: 0.8421378139542376 Spearman Correlation: 0.6620042935245383 Coefficient of Determination: 0.701695250746665 RMSE: 0.5359238970756081 NRMSE: 0.09130345623721962 MAPE: 528.0662403750241 Pearson Correlation: 0.8546508690862087 Spearman Correlation: 0.7158813764879666 Coefficient of Determination: 0.7260252226089989 RMSE: 0.5582553637964076 NRMSE: 0.1007026776456468 MAPE: 189.64004204659025 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['CCDC105', 'DNAH2', 'LACC1', 'TNNC1', 'GSTM2P1', 'FAM167A-AS1', 'RASSF3', 'TOPBP1', 'DYNLT3', 'FAM74A3', 'ELFN1', 'SMEK3P', 'FMO3', 'NPHS1', 'NOL11', 'MAP2K5', 'BOLA1', 'WFDC13', 'CSRP2', 'BTN2A3P', 'HIST1H3E', 'MEP1B', 'SNRNP200', 'NHLRC1', 'ARRDC5', 'COBL', 'HOGA1', 'IL17C', 'TRABD', 'MAS1', 'METTL3', 'MICAL1', 'CNP', 'CLSTN2', 'INTS4P2', 'MAPK6', 'KIF1BP', 'RAB40A', 'KDM7A', 'CABP4', 'ARC', 'HKDC1', 'RCOR3', 'PTGIR', 'CSMD1', 'GAGE1', 'MYO6', 'SRRD', 'COL6A2', 'RNF31', 'IQCD', 'IPO9', 'AGER', 'CELF1', 'FAM13C', 'PAGE2B', 'CALCB', 'GAS2L1', 'GOSR2', 'TFPT', 'SDC1', 'HLA-DRA', 'VASN', 'PPP1CA', 'CREBBP', 'CECR5-AS1', 'TUBD1', 'TSPAN16', 'PHOX2A', 'ALOX12P2', 'MMADHC', 'ZNRF1', 'SAV1', 'CP', 'KLHDC3', 'RIC1', 'MRGPRD', 'FGFBP3', 'PDZD2', 'SUV420H1', 'VSTM5', 'NEU2', 'WHAMMP3', 'OR56A4', 'ZNF18', 'SCNN1B', 'C9ORF89', 'ZSCAN23', 'MATN2', 'TOX4', 'PAQR8', 'SNORA77', 'PPP1R7', 'LILRA5', 'RMND1', 'KCNK17', 'LRP8', 'OCLM', 'GPR179', 'MBD4', 'BACH1', 'NKX2-8', 'CREB3L2', 'TRMT1L', 'PTGS2', 'TAOK1', 'TRIM61', 'HLF', 'MED6', 'LOC392196', 'NUBPL', 'ERCC3', 'ZNF800', 'STKLD1', 'PFKM', 'KLHDC7B', 'SGIP1', 'TEKT4', 'ATG5', 'PLCXD3', 'ZNF99', 'TMEM255B', 'ARHGEF2', 'EGFEM1P', 'MRPL13', 'QTRTD1', 'MUM1L1', 'ABCB10', 'EPM2AIP1', 'KRT24', 'SUZ12', 'CEP76', 'LYZ', 'ACIN1', 'SELM', 'GPATCH8', 'LOC100132111', 'IPO5', 'CTAG2', 'MTM1', 'LDLR', 'MKKS', 'TMEM200B', 'LMCD1', 'LY6G6C', 'TSTA3', 'ZNF83', 'TDRG1', 'ZNF296', 'GATA3-AS1', 'FGF4', 'GIN1', 'NEIL3', 'FHOD3', 'TADA1', 'KLHL26', 'TMEM53', 'RIPK1', 'CMPK2', 'SH3GLB1', 'DYNLL2', 'C4ORF29', 'ZDHHC6', 'THAP9', 'CLEC12B', 'MCMDC2', 'DEFB105A', 'MC4R', 'LMF1', 'DMXL1', 'MUL1', 'EXOSC1', 'ARMCX1', 'C1QTNF2', 'ZFAND2B', 'ARNTL', 'GLUD1', 'MAP1S', 'NUFIP2', 'PABPC3', 'SPTB', 'NDUFA9', 'SLITRK5', 'GNB4', 'FAM63B', 'LEP', 'PEAR1', 'PXDN', 'NGLY1', 'NLRP12', 'ARFGEF3', 'PLEC', 'TPP1', 'UQCRFS1', 'SYNGR3', 'ATP6AP2', 'PRSS3', 'TWF2', 'CPNE9', 'RTN4R', 'SNORD50A', 'ADORA1', 'TAF10', 'AQP4-AS1', 'CHD8', 'CLEC4A', 'ZNF30', 'OR52H1', 'GDAP1L1', 'KCNJ6', 'AQP12A', 'GHRH', 'HILS1', 'DHH', 'LINC00320', 'TCERG1', 'MYO9B', 'CSN1S2AP', 'PRMT5', 'CACNG1', 'DBI', 'ANKMY2', 'MCOLN3', 'SCARNA15', 'SNORD42B', 'THSD4', 'SKIV2L', 'POP5', 'ABR', 'UNQ6494', 'SDHAF2', 'HOOK3', 'KCNE3', 'S100G', 'CCDC88C', 'RELN', 'SNAI2', 'NKTR', 'ZNF641', 'RPS26P11', 'CDS2', 'ITIH1', 'FAM171B', 'CHD5', 'RLN3', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.7428841326198573 Spearman Correlation: 0.728540969567521 Coefficient of Determination: 0.5518768344983578 RMSE: 0.30191136654957723 NRMSE: 0.1094726606219935 MAPE: 220.0666118451172 Pearson Correlation: 0.19980773440786295 Spearman Correlation: 0.20228431775957306 Coefficient of Determination: -0.47525636447695474 RMSE: 0.6008896938623312 NRMSE: 0.1670646260825276 MAPE: 291.41408323148 Predictor: ElasticNet Pearson Correlation: 0.7235567200407748 Spearman Correlation: 0.710501936047964 Coefficient of Determination: 0.5234183246963744 RMSE: 0.311350405840548 NRMSE: 0.11289524373540015 MAPE: 216.08018423954763 Pearson Correlation: 0.24656706245705157 Spearman Correlation: 0.24426489108343 Coefficient of Determination: -0.30559859593088756 RMSE: 0.5652828946699181 NRMSE: 0.15716491128655538 MAPE: 281.51364846379533 Predictor: RandomForests Pearson Correlation: 0.5618744066250835 Spearman Correlation: 0.5836542231620334 Coefficient of Determination: 0.30103101496352336 RMSE: 0.3770593539638106 NRMSE: 0.13672122107416615 MAPE: 232.4603571156334 Pearson Correlation: 0.39351333419360235 Spearman Correlation: 0.3808136780113289 Coefficient of Determination: 0.13111312931987895 RMSE: 0.46115043671866657 NRMSE: 0.1282130914627557 MAPE: 159.24309930170756 Fold: 4 Protein: RB1 x_train_column_count: 371 x_train columns: ['TBC1D13', 'STX10', 'GPIHBP1', 'RIPPLY1', 'C1QBP', 'C16ORF70', 'DPAGT1', 'SLC25A52', 'CSRNP3', 'SMTN', 'PGM2', 'LIX1', 'GTF3C5', 'NFE2L3P2', 'LOC148413', 'FHIT', 'RNF212', 'LY6G5B', 'MRPL39', 'KLHDC4', 'CEP85L', 'PDHA2', 'GZMA', 'ANXA7', 'PHF21A', 'PDK4', 'YAE1D1', 'SLC27A4', 'CLCN6', 'CEP89', 'TSSC4', 'BTNL9', 'SOGA1', 'GABARAPL3', 'TYK2', 'C4ORF3', 'FAM186B', 'PSMA7', 'GUCY2GP', 'SNORD114-14', 'RNFT1', 'ZNF586', 'LRRC23', 'SNORD115-8', 'EIF4EBP2', 'STK17B', 'MFSD1', 'MTMR14', 'EID2B', 'FBF1', 'FAM19A2', 'BUB1B', 'SMUG1', 'GLT8D1', 'CES4A', 'MPP2', 'BMX', 'LRP1', 'GIMAP5', 'SIX2', 'ITPRIPL2', 'FLJ37201', 'FCRLA', 'SDHAP2', 'PCP4', 'RSL24D1', 'ZNF30', 'CRCP', 'MIR31HG', 'TSR1', 'PPP2R5C', 'OR52B6', 'RSAD2', 'IAH1', 'NUP205', 'CDH2', 'C8ORF74', 'AGPAT5', 'GSTM4', 'SPRR1B', 'PAPSS2', 'ARHGAP11B', 'IMPAD1', 'PIP4K2C', 'FUBP1', 'NCAN', 'OSBPL7', 'DAZAP2', 'LINC00957', 'PIWIL1', 'BRCC3', 'SNORD8', 'TMEM145', 'SLC25A32', 'DES', 'RGN', 'CENPE', 'ZNF675', 'LOC153684', 'HAUS5', 'JMJD1C-AS1', 'DUSP10', 'ZYX', 'SEPT3', 'XKRY2', 'IFI27L2', 'ZFHX3', 'COA7', 'HMGB4', 'CHCHD3', 'OR2W5', 'NCKAP5L', 'ZNF492', 'PRKACB', 'DDX46', 'ZBTB33', 'F8', 'ZNF536', 'TOP3A', 'GLTP', 'KRTAP3-2', 'MKS1', 'ALDH3A2', 'C1S', 'MIS18BP1', 'PDLIM5', 'TOM1', 'TIAF1', 'EBPL', 'ABO', 'LAGE3', 'LY75', 'ERGIC1', 'SERTM1', 'HADHB', 'DGKG', 'SPRR2E', 'ARHGAP5', 'DAGLA', 'PIGZ', 'OR10R2', 'POMGNT2', 'SIX4', 'ASCC2', 'MIR600HG', 'KIAA0907', 'KCNQ5', 'SMIM20', 'ZNF263', 'FARSA', 'NLRP5', 'TMED10P1', 'BRICD5', 'MNT', 'ATG14', 'FAM150B', 'MYRIP', 'SLC17A9', 'NOTCH2', 'C19ORF40', 'RAB11FIP2', 'AREG', 'CIRBP-AS1', 'GRN', 'CLTA', 'CBLN2', 'PCDHA1', 'NRK', 'DHRS12', 'SNORD117', 'TUBA1C', 'ADD2', 'DHX38', 'GIMAP7', 'LONRF2', 'CLTCL1', 'KCNK7', 'AGAP3', 'LRIT1', 'KTI12', 'CITED1', 'CD200R1L', 'SYNPO2', 'THY1', 'GRAPL', 'CHIA', 'KLC1', 'CDK5RAP3', 'C15ORF48', 'EID3', 'ATXN7L1', 'MAFB', 'HOXD13', 'CDC42EP4', 'VMAC', 'CHPT1', 'NPTXR', 'GPATCH2', 'VWA8', 'MDGA2', 'ZAR1', 'HS6ST2', 'ZNF766', 'CACNB1', 'GFI1', 'TINAGL1', 'NKX2-1', 'ANGPTL1', 'KHDC3L', 'KLRC4', 'KIAA0196', 'MAPKBP1', 'FAR2', 'DSPP', 'KDELC2', 'HOXA13', 'AAGAB', 'RHBDF2', 'GMPPB', 'IGFALS', 'EFNA5', 'ZNF692', 'LINC00628', 'CEACAM19', 'TPP1', 'TRIM14', 'SNORD115-39', 'FBXO43', 'ARIH1', 'USP3', 'HMGB3P1', 'MDM4', 'SULT1C2', 'ACSS2', 'NIT2', 'ANKRD30BP2', 'AZI2', 'BTBD19', 'D2HGDH', 'MIEF2', 'DRC7', 'PLBD1', 'PLK5', 'FAM210B', 'MPRIP', 'TMX1', 'LEMD3', 'ASL', 'TOP2B', 'TTC9C', 'ACSL6', 'ITFG1', 'GGT1', 'OR2D3', 'MAML3', 'TRIM29', 'OR1E2', 'STX8', 'CDC26', 'LMCD1', 'STX3', 'OR51M1', 'LINC00696', 'SPAG5', 'MAGI1', 'AP3B2', 'BBOX1', 'CPVL', 'EYS', 'TRIM3', 'EPSTI1', 'SCNM1', 'ZC3H13', 'PRCC', 'PUSL1', 'PRDM13', 'IP6K3', 'ID2', 'AZGP1', 'PLIN4', 'HDDC3', 'SNORD115-25', 'SP110', 'GLIS3-AS1', 'WDR60', 'ZG16B', 'EMB', 'PTPRE', 'LOXL1', 'NUDT16L1', 'DTHD1', 'DACH1', 'ETV1', 'NOXO1', 'TMEM39B', 'ELP2', 'HECW1', 'DPY19L1', 'TPTE2P3', 'PRKCD', 'DEFB125', 'ABCA13', 'CDC14C', 'CSF3', 'TRPC6', 'FABP5P3', 'POMZP3', 'SFXN5', 'RAD50', 'PRAM1', 'POLR2K', 'DHRSX', 'UGT1A9', 'BEAN1', 'MYOT', 'MIR503HG', 'MEIS1', 'ADCY2', 'CFDP1', 'NANOS2', 'TM9SF1', 'OR13J1', 'CERKL', 'AFP', 'GPX3', 'ZNF407', 'RIMS4', 'KIAA0226', 'RNF7', 'LINC00336', 'GPR139', 'DR1', 'DSG1', 'ZNF84', 'ZP3', 'FAM129C', 'LINC00698', 'ALKBH8', 'TCP10', 'TNC', 'RARB', 'A4GALT', 'KLHL42', 'NUP188', 'DUX4L2', 'CEP44', 'OR6V1', 'ADRBK2', 'C20ORF85', 'IFIT1B', 'EOMES', 'IRX2', 'CCSAP', 'RPGRIP1L', 'GBAP1', 'SF3B4', 'ZNF876P', 'GDNF', 'ID1', 'ZNF684', 'SLC13A2', 'PLCL2', 'MMAA', 'CHMP6', 'AMOT', 'WFIKKN2', 'SLC12A3', 'GDF10', 'PLCB1', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.8110362640943771 Spearman Correlation: 0.7554922018084035 Coefficient of Determination: 0.6577798216761643 RMSE: 0.14713280399192613 NRMSE: 0.053808076357492005 MAPE: 484.4507024019138 Pearson Correlation: 0.019690941997920753 Spearman Correlation: 0.04722004015012656 Coefficient of Determination: -11.177993464346509 RMSE: 0.5753896355578932 NRMSE: 0.5512873525063171 MAPE: 598.4390033197151 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.5117436200033616, tolerance: 0.0034032643600116126 positive)
Pearson Correlation: 0.7782640295920448 Spearman Correlation: 0.7185021963798253 Coefficient of Determination: 0.6050848631023001 RMSE: 0.1580551295892097 NRMSE: 0.057802490341285 MAPE: 535.1545173206894 Pearson Correlation: 0.043152638167636086 Spearman Correlation: 0.042352149029289646 Coefficient of Determination: -6.963300055061759 RMSE: 0.46528677269803514 NRMSE: 0.4457965476354148 MAPE: 494.4071480237197 Predictor: RandomForests Pearson Correlation: 0.6018143532709441 Spearman Correlation: 0.45428668294533703 Coefficient of Determination: 0.18229705429750775 RMSE: 0.22743352687859147 NRMSE: 0.08317492937338776 MAPE: 141.5611622639285 Pearson Correlation: 0.14710745957552582 Spearman Correlation: 0.161555630369456 Coefficient of Determination: -0.06661188534749463 RMSE: 0.1702853850744404 NRMSE: 0.16315236373207412 MAPE: 98.07181767126117 Protein: CDH1 x_train_column_count: 836 x_train columns: ['TTC22', 'KCNH1', 'TMEM211', 'CATSPERG', 'LPA', 'MFI2', 'FLJ45079', 'LBR', 'CSMD1', 'F12', 'ENOX1', 'SLC7A14', 'ACTR3BP2', 'LIMK1', 'NDUFS6', 'SNORD115-27', 'DGCR6', 'NDUFAF2', 'GCNT4', 'SLC35F5', 'OGN', 'CLEC3B', 'DGKH', 'HOXA5', 'TTC19', 'TMEM130', 'ERMP1', 'SRRM5', 'CHRM3', 'GPR146', 'FRYL', 'TUBB2B', 'NPTX1', 'NR2F1-AS1', 'MPST', 'TTLL13P', 'PRRT2', 'OTUD6A', 'COA4', 'RPL13AP17', 'M6PR', 'TRIM37', 'SNX15', 'TTC31', 'EPHA2', 'RPS4Y1', 'BEAN1', 'CCNB1', 'TACC3', 'EIF3K', 'OR8B2', 'C4ORF33', 'OCRL', 'TRIM52', 'TBCEL', 'DTNBP1', 'TMEM135', 'WDR18', 'H2AFX', 'TMCO4', 'CCNJL', 'CYP46A1', 'CXCL16', 'PILRB', 'GPR87', 'DDX56', 'AOC4P', 'THNSL1', 'CSNK1G2', 'FAM81A', 'KLK10', 'FAM58A', 'IGDCC4', 'SPDYA', 'CC2D2A', 'NEDD4', 'EFCC1', 'ZNF768', 'DEFB114', 'SYBU', 'TLCD1', 'CKS2', 'PSMD4', 'CSRNP1', 'CYTH2', 'WDR83OS', 'CASP3', 'OR6Q1', 'ZNF595', 'MRPS34', 'MRPL23-AS1', 'ZSCAN30', 'PDLIM1', 'PSG9', 'PPP1R2', 'SGPP1', 'PWWP2A', 'MBTPS1', 'SLC50A1', 'SEPT1', 'VCX3A', 'TXNDC9', 'ATRIP', 'TSPYL5', 'ATP6V1B2', 'CNGA3', 'SAR1B', 'NUP54', 'OR2K2', 'DUX4L5', 'SNORA27', 'GFRA1', 'FDPSP2', 'RAB13', 'SEPW1', 'CA14', 'LYPD6B', 'KRTAP20-3', 'TRAM2', 'ZNF697', 'SNORD86', 'CFH', 'TCP10', 'TLE4', 'ACOT2', 'SNORD91A', 'CERKL', 'FGF6', 'CBLN1', 'CWC27', 'B3GNT2', 'CAPN10', 'NGFR', 'SUMF2', 'AFM', 'PNLDC1', 'RPS6KA1', 'SERPINB8', 'KCNE3', 'LOC256880', 'ZFP28', 'NOL4L', 'ATP9A', 'GALNT9', 'PPY', 'ADGRF4', 'DFNA5', 'ZNF283', 'USP6', 'OR10J3', 'LINC00696', 'AMBP', 'FAM65C', 'MLKL', 'WNT11', 'CARKD', 'CLRN1-AS1', 'SH3RF2', 'PCDHGC3', 'ARSJ', 'TARM1', 'MLN', 'DCAF8L2', 'EPO', 'ERICH4', 'EIF3A', 'TUFT1', 'EEF1G', 'RIMBP3C', 'KCNT1', 'ACAD10', 'CHRND', 'BCDIN3D', 'STK10', 'PHOX2B', 'AK3', 'SNAR-A4', 'AGPAT5', 'RHBDF1', 'JMJD1C', 'FGFR1', 'LINC00202-1', 'RPL34-AS1', 'RTL1', 'C2ORF66', 'ZNF136', 'KLLN', 'SAMD4A', 'MRPS36', 'SLC7A5P1', 'GPX7', 'ZNF324B', 'NFKBIA', 'DOHH', 'CSTF2T', 'MAL2', 'C1ORF95', 'FZD8', 'PRTG', 'TIFAB', 'CAMSAP2', 'C19ORF38', 'RAC3', 'SUN3', 'DICER1', 'MS4A8', 'LINC01548', 'UBAP2', 'ZNF221', 'RFX8', 'DNAH3', 'GCOM1', 'SRGAP3', 'CDC14C', 'C11ORF94', 'PSMD8', 'AOX2P', 'TEKT1', 'IL17RE', 'NANOS1', 'CUEDC1', 'GAS6', 'GAMT', 'BTN3A3', 'SNORA2A', 'CCL15', 'ADAMTS12', 'SOGA1', 'DNAH8', 'GRM1', 'OSBP2', 'KIAA1211L', 'D2HGDH', 'ZBTB17', 'SLC6A4', 'EPHX1', 'ZNF133', 'C8G', 'MACF1', 'PTK7', 'HHEX', 'RPL23AP7', 'CHMP2A', 'MATR3', 'FAM101B', 'CXORF49B', 'LYAR', 'ARPC1B', 'KRTAP12-3', 'MTF2', 'MAP3K9', 'ALOXE3', 'RBL2', 'RGS16', 'ZNF562', 'TRADD', 'CDKL4', 'SNORA37', 'FAM199X', 'ADAMTSL4', 'PML', 'CTIF', 'LPIN1', 'TBC1D9', 'SIAH2', 'CREBRF', 'MRGPRG', 'TRPC3', 'TESK2', 'LTB4R2', 'PSMD7', 'PQLC2', 'SNORD10', 'WRAP53', 'LINC00264', 'C1ORF52', 'MFSD6L', 'TMEM132B', 'DPP10', 'ZMAT4', 'PGM2L1', 'AMER3', 'OR2F1', 'ZNF295-AS1', 'RHOD', 'FUT1', 'WDR61', 'HOXD12', 'LCE1B', 'SLC2A9', 'HMBS', 'CDK9', 'PLEKHA1', 'SUGP2', 'UBA52', 'LAPTM5', 'MYH15', 'CD6', 'IL1RN', 'C10ORF10', 'CLN3', 'AANAT', 'CRELD1', 'DNTTIP2', 'CERS1', 'TREM2', 'NASP', 'CACNB3', 'GOLGA3', 'TREML4', 'CDHR1', 'HRAS', 'KHDC1', 'C17ORF49', 'PGLYRP4', 'AP2A2', 'TMEM244', 'GEMIN5', 'TAS1R1', 'FAM168A', 'ADAR', 'IRGM', 'SRPK2', 'GFRAL', 'RILPL1', 'HECTD3', 'SMIM7', 'LRRC20', 'PRKAG1', 'HIBCH', 'CST4', 'ASH1L-AS1', 'FOXO3', 'FERD3L', 'SOHLH1', 'CTBP2', 'PSMG3', 'PEAK1', 'FAM111A', 'IGFL1', 'BARX1', 'EYA4', 'ARFGEF2', 'TNFSF18', 'RAC2', 'ZNF45', 'PSME4', 'CMTM6', 'ARID4A', 'PAX8', 'WNT2', 'RASGRP3', 'SLITRK6', 'LY86-AS1', 'HDAC7', 'C20ORF173', 'KRTAP10-6', 'APBA1', 'DEFB134', 'SMC4', 'PODXL2', 'TRIM17', 'ACOXL', 'TTC14', 'FCRL2', 'DUSP22', 'SLC25A31', 'TXNIP', 'GALNTL6', 'ROS1', 'MYH6', 'SYTL4', 'SNORD12B', 'VPS37B', 'NDUFAF6', 'ARRB2', 'GABARAP', 'POU2F2', 'KIF21A', 'IMPDH2', 'XKR6', 'CCDC88B', 'OR10A6', 'STX7', 'TAF1L', 'ENOSF1', 'PC', 'SPATA20', 'UBA2', 'PAX5', 'CS', 'ZNF525', 'MYOF', 'APBB1', 'CUL4B', 'ADCY5', 'GGH', 'CHD1', 'GRIA1', 'NFKBID', 'GUCA1A', 'GOLGA6L6', 'LINC00926', 'SP140L', 'NKX2-5', 'TSSC4', 'RRNAD1', 'GTF2H2', 'OR7A5', 'XPOT', 'DLGAP4', 'POLG', 'SLC25A13', 'RNF216', 'TIMM13', 'STIM2', 'LRRC15', 'C14ORF39', 'PDCD4-AS1', 'HIST1H3E', 'PPP1R16A', 'DNMBP-AS1', 'MARCKSL1', 'PPP1R12C', 'KRTAP23-1', 'UGT1A1', 'ZNF419', 'TJP2', 'IL34', 'EVI2A', 'CCL3L3', 'AGO2', 'SHISA4', 'STS', 'MGRN1', 'EFNA4', 'PLEKHM1', 'MARCH2', 'OR51G1', 'FUT9', 'NDST2', 'TMEM98', 'ABHD5', 'PARP15', 'P2RX1', 'LMX1B', 'ING3', 'TEAD3', 'EHD4', 'C11ORF95', 'SEC61A1', 'MYC', 'HLA-DRB1', 'ADCY3', 'NAT8B', 'PSEN2', 'TMEM54', 'GJC1', 'NDUFA5', 'LOC100288778', 'NRAS', 'ZNF28', 'RIMBP2', 'FAM107B', 'GPR18', 'MOGS', 'TUBA1A', 'HAPLN4', 'ARX', 'CHRNA2', 'GPKOW', 'TTLL3', 'SCARA5', 'C1ORF123', 'ILK', 'GCNT7', 'PTPRR', 'DAD1', 'NPBWR2', 'INA', 'STAG2', 'ZNF281', 'PI4KA', 'FRAT2', 'GPR135', 'DKFZP434L187', 'SLC7A11', 'RBFOX3', 'REG3A', 'FNBP1', 'STXBP6', 'TIMM22', 'SNX14', 'HIST2H2BF', 'SLC38A7', 'PIK3C2A', 'CENPT', 'AFAP1L2', 'ABTB2', 'NOP9', 'C11ORF70', 'TMEM256', 'SORD', 'CAPN9', 'ASPDH', 'EPS8L3', 'ISYNA1', 'CELF3', 'CYP4F3', 'METTL21A', 'LYSMD4', 'OR6Y1', 'LMNB1', 'P2RX7', 'CCL26', 'CTXN2', 'PRDM16', 'MPPED2', 'AQP7P1', 'TMEM95', 'UGGT2', 'SNX12', 'KATNBL1', 'STX3', 'METTL12', 'AP2B1', 'ALDOB', 'GMPPA', 'GRIA4', 'C1ORF228', 'CYFIP1', 'MFGE8', 'EIF4ENIF1', 'SYMPK', 'FTSJ1', 'LRRC19', 'BGLAP', 'PPFIBP1', 'CCDC134', 'RAMP3', 'MTG1', 'GUCA1B', 'HEBP2', 'MPDZ', 'ZBTB20', 'C3ORF58', 'RPTN', 'VPS4A', 'TMCO1', 'SNX22', 'DPEP2', 'C7ORF43', 'APMAP', 'HLF', 'RUVBL2', 'HNRNPA2B1', 'RBP7', 'CASZ1', 'KRTAP2-1', 'GGA2', 'CCR1', 'ASB4', 'RCC2', 'AGPAT1', 'RBM15B', 'SQSTM1', 'LPO', 'HK1', 'FAM222A', 'ALDH2', 'NPNT', 'COG4', 'FRMD7', 'ULK4P2', 'CDC23', 'APOC2', 'PRG2', 'ZSCAN12', 'KLHL24', 'FLOT1', 'FAM180B', 'COA3', 'DNAJC30', 'LRRC58', 'PMF1', 'ZNF343', 'KLHL36', 'COQ2', 'HSPE1', 'SLC48A1', 'SLC22A23', 'PACS2', 'LPAR5', 'IFI30', 'SERTAD3', 'CPS1', 'SNORD15B', 'MGMT', 'LINC00161', 'ACY1', 'TPTE2P6', 'FLG2', 'SEC24B', 'MARC1', 'OR5AP2', 'ADIPOR1', 'ATF6B', 'PCDHA13', 'LIPE', 'MYH10', 'OR1J2', 'COL6A5', 'EXOSC7', 'ETFB', 'YARS2', 'TAOK3', 'EXOC3-AS1', 'ACTR1B', 'SUPT7L', 'MRPL43', 'ZNF513', 'UBE2Q1', 'PRKAB1', 'NAIF1', 'HERC3', 'PMEL', 'GPR180', 'DALRD3', 'LY86', 'STARD10', 'CYTH4', 'LOC115110', 'ELK4', 'SORT1', 'NINL', 'CEP170P1', 'KCNN4', 'AP1M2', 'NT5DC1', 'FOXL2NB', 'LINC00623', 'POLR3A', 'TICAM2', 'CECR5', 'SELM', 'MLH1', 'DPH5', 'C6ORF10', 'PART1', 'CYB561', 'DYNC1I1', 'OR5A1', 'SNORD116-20', 'ZDHHC8P1', 'ZNF493', 'WNT1', 'CCNT2', 'ANO1', 'RBM25', 'ZC4H2', 'ZNF879', 'SARDH', 'LINC00661', 'GPR149', 'PRAMEF10', 'ZNF296', 'ZCCHC24', 'MTHFSD', 'GPATCH3', 'ALG1L', 'TXLNB', 'USP9X', 'KPNA5', 'FAM195B', 'TBX4', 'OR10J1', 'SLC47A1', 'TLK1', 'ARHGDIA', 'RNF113A', 'DOCK1', 'XKRY2', 'ZNF737', 'WDR37', 'WDR81', 'TECTA', 'RWDD2B', 'GYS2', 'PPP1R32', 'GDF11', 'GRB14', 'U2AF1L4', 'VPS41', 'CAPN12', 'DENND6B', 'RFTN2', 'SNORD115-7', 'C6ORF47', 'CCDC126', 'TOMM70A', 'PDZK1IP1', 'PCDH19', 'CHST6', 'NAA15', 'HR', 'PDDC1', 'FAM216A', 'DCBLD1', 'NUTM2F', 'BDKRB1', 'AGGF1', 'ARSE', 'REEP1', 'FAM26E', 'LRIG3', 'BTG2', 'CCDC116', 'CEP170', 'C1GALT1', 'HSFY2', 'TMOD2', 'GSG1', 'HIF3A', 'SNRNP70', 'HIST2H2AC', 'FGF1', 'ETNPPL', 'IPCEF1', 'C17ORF62', 'DCAF16', 'LRRFIP1', 'SLC35F1', 'OR2V2', 'IFNGR2', 'OGG1', 'AFAP1L1', 'RBM39', 'CCNI2', 'OR5C1', 'ALKBH1', 'PNMA3', 'CEP126', 'PCDHGA5', 'NPTX2', 'PROP1', 'PCDHA11', 'GRIK1-AS1', 'IFNA17', 'RMDN3', 'CENPI', 'ZMAT5', 'PPP3CA', 'RRBP1', 'SGCB', 'ZBTB41', 'PYGL', 'MS4A12', 'LIME1', 'PKD1L2', 'GTF3C4', 'CTDP1', 'LINC00092', 'TSG101', 'FMO5', 'FCHO1', 'LOXL3', 'OLMALINC', 'CNNM2', 'PUF60', 'XK', 'IL2RA', 'ZMAT2', 'C16ORF92', 'POLR3B', 'PSAT1', 'CDKN1C', 'NUDT16P1', 'GAS5', 'AIDA', 'KRTAP19-4', 'LOC100132287', 'TBC1D2B', 'CD46', 'TMEM18', 'GHSR', 'RGS8', 'AGL', 'PEMT', 'PPCDC', 'PVRL3', 'KCNK10', 'HNRNPDL', 'APP', 'FBXO28', 'TMEM194A', 'CCDC58', 'TTC36', 'ZDHHC11', 'GRHL2', 'ZNF831', 'TMEM99', 'SQLE', 'GALE', 'SERP1', 'CBX2', 'RTN4', 'GUSB', 'ELMO2', 'USP8', 'SNORD11', 'HAUS2', 'PLA2G2F', 'INS', 'GRIK4', 'SYT12', 'KLRC4', 'SYCP1', 'MUC13', 'LAMB3', 'ZNF836', 'PXDC1', 'AP3M1', 'SSTR2', 'TRIM27', 'ARRDC4', 'GLRA3', 'SCUBE3', 'SLC25A32', 'XKRY', 'TMEM97', 'SNORD60', 'TK1', 'TEX35', 'KRI1', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.1127579871326535e-14 NRMSE: 3.3641571719573473e-15 MAPE: 1.158554467120182e-11 Pearson Correlation: 0.17244646084479748 Spearman Correlation: 0.15833863265127995 Coefficient of Determination: -6.887647074884101 RMSE: 3.2759615159168503 NRMSE: 0.5943110765060865 MAPE: 1496.7121877193915 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 2.17375491584027, tolerance: 0.06736762282826622 positive)
Pearson Correlation: 0.9998816841407108 Spearman Correlation: 0.9996885185206448 Coefficient of Determination: 0.9997527547246675 RMSE: 0.01759537285758852 NRMSE: 0.002801721737777223 MAPE: 9.065754914213404 Pearson Correlation: 0.18082753706293786 Spearman Correlation: 0.17656828638761082 Coefficient of Determination: -6.562048996942878 RMSE: 3.2076339364674733 NRMSE: 0.5819153761596955 MAPE: 1411.2978984149509 Predictor: RandomForests Pearson Correlation: 0.7537436268568755 Spearman Correlation: 0.7428295020816311 Coefficient of Determination: 0.5623623627105365 RMSE: 0.740272823268107 NRMSE: 0.11787408414829255 MAPE: 215.2464759581902 Pearson Correlation: 0.7542597026278476 Spearman Correlation: 0.4102071098143369 Coefficient of Determination: 0.5020949092432978 RMSE: 0.8230729698780344 NRMSE: 0.14931841549255004 MAPE: 144.20317688858216 Protein: CDH2 x_train_column_count: 474 x_train columns: ['PWRN2', 'PHLDB3', 'ISCA1P1', 'SORL1', 'HMGXB3', 'B4GALT7', 'ZUFSP', 'IFITM5', 'CACFD1', 'WDFY3', 'TRRAP', 'IKZF2', 'PTPRA', 'LRRC16B', 'FRZB', 'HRK', 'DUOX1', 'CENPF', 'FAM175A', 'ARMCX6', 'SBF1', 'CD164', 'CAPS', 'ACAD9', 'SEC14L4', 'CRX', 'FOXP4', 'PIGB', 'GBA2', 'CST9', 'TRAF6', 'CXCL9', 'PAGE3', 'UTP20', 'TMEM9', 'MROH2B', 'SNORD115-3', 'HIST1H3A', 'OR5J2', 'ZAR1', 'RBPMS', 'PLD1', 'PHKA2', 'BAALC', 'EDN3', 'LAMA1', 'CADM1', 'RPF2', 'CSF1R', 'TM4SF5', 'HNRNPA3P1', 'OR13J1', 'IL5', 'LOC613037', 'FGFRL1', 'RBFOX2', 'ZC3H14', 'B3GALNT1', 'CLIP3', 'ANKRD23', 'SORCS1', 'SNORD35A', 'CASC3', 'AKR1C4', 'AKIRIN2', 'STEAP2', 'ZBTB44', 'ARPP19', 'DHRS9', 'CYSLTR2', 'UROC1', 'SARNP', 'ITPR3', 'CMTM3', 'PLA1A', 'FAM175B', 'C8G', 'PROKR2', 'ARHGAP17', 'C3ORF36', 'MYADM', 'FAM47A', 'PHAX', 'ANXA4', 'PDE2A', 'LINC01020', 'SGK223', 'FZD3', 'POFUT2', 'SNORD17', 'LINC00628', 'CLK2P1', 'NANP', 'BUB1', 'CASR', 'ZNF519', 'SLC23A3', 'ZDHHC11', 'GREB1', 'SLC6A20', 'SPATA2', 'HIST2H4A', 'PPP2R5B', 'DYNC2LI1', 'PLXNB2', 'HBD', 'CLDN23', 'ZBTB1', 'PPP6R2', 'UGT1A1', 'DCDC1', 'SP7', 'ARMC1', 'RNF220', 'C6ORF106', 'GMNN', 'OR2T10', 'CTR9', 'SYT9', 'MGC16275', 'CRYAA', 'CCL15', 'ELOVL7', 'RPL8', 'OXCT2', 'CRYZ', 'MFSD10', 'BEX4', 'OR10C1', 'NFE2L3P2', 'LOC728392', 'SV2A', 'PRDM6', 'IRX4', 'SLC2A6', 'ZNF444', 'GNRHR', 'MORC4', 'TUBB1', 'CREB1', 'C11ORF95', 'THEMIS2', 'LINC00882', 'DKFZP434L192', 'TUT1', 'ACSS2', 'TMEM256', 'MAGEB6', 'ZNF599', 'MYLK4', 'SYCE2', 'EOGT', 'LIF', 'SLC35G5', 'NDOR1', 'AKAP5', 'KIAA0930', 'SCUBE3', 'PRRC1', 'PCF11', 'HOXA11', 'LOC391322', 'GABARAPL1', 'CKLF', 'RNF138', 'SDK2', 'CYP2S1', 'C9ORF69', 'UCA1', 'GGT8P', 'CHPF2', 'THNSL2', 'FLRT3', 'RRAGB', 'IKZF5', 'KLHL5', 'C1ORF122', 'RPS7', 'XRCC2', 'GLUD2', 'KLLN', 'MOG', 'FAM150A', 'CCDC7', 'SNORD94', 'EFNA4', 'OR1E2', 'LYNX1', 'LINC00894', 'RFTN1', 'VWDE', 'FBXO2', 'TEX37', 'RNASE13', 'KPNA1', 'ZFYVE16', 'KLHL22', 'UCK1', 'ALDH7A1', 'ANO1', 'IRF4', 'ERCC6', 'MUCL1', 'PIM1', 'LETM2', 'ZNF93', 'MAN1C1', 'VPS37A', 'PRSS21', 'RNF166', 'FNTB', 'ABCA4', 'GDPD1', 'GMCL1P1', 'HIST1H2BN', 'AHCTF1', 'TSPYL4', 'RPLP0P2', 'ZNF837', 'RGS10', 'ITGAV', 'TMPRSS3', 'PAM', 'CENPN', 'THG1L', 'KCNQ2', 'COL3A1', 'WFDC6', 'ARMCX1', 'EHHADH', 'SLC25A45', 'CYP4F12', 'HBS1L', 'BANP', 'ATP13A5', 'ZNF71', 'CLEC19A', 'TTTY14', 'PHRF1', 'CUTC', 'FAM170B', 'HPVC1', 'SNORA11C', 'MMP2', 'NMU', 'ZNF576', 'SUSD6', 'IL22RA1', 'COL4A4', 'PHF1', 'DEFB1', 'TMEM105', 'SOHLH2', 'LOC100270804', 'FITM2', 'RPS6KC1', 'CSN1S1', 'FAM71F1', 'SNAR-C2', 'MYO18B', 'MYT1L', 'NINJ1', 'MESP2', 'TMEM254-AS1', 'ST6GAL1', 'FAM57B', 'MRM1', 'UBAP2', 'NEURL3', 'C12ORF50', 'PRR22', 'CAST', 'CXCL10', 'PREX1', 'LRRC8A', 'DIO1', 'DDB1', 'IL5RA', 'TRPM6', 'TSPAN14', 'SNORD96A', 'EP300', 'SNORD4A', 'GNGT1', 'NDUFAF7', 'GPRC5B', 'OR13C9', 'DNASE1L2', 'CHSY3', 'KRBOX4', 'SAMD9L', 'CAPN2', 'RYR1', 'LAMA4', 'MGC15885', 'GLYAT', 'OCIAD2', 'TRDN', 'GPR4', 'CCDC113', 'CYP26C1', 'HAPLN4', 'TTLL12', 'ZBTB40', 'B3GNT7', 'APOA4', 'DDX27', 'AGPAT6', 'TRMT10A', 'SMC3', 'BCAP31', 'MAGEC1', 'KIAA1217', 'UXT-AS1', 'LRRC61', 'PPM1G', 'RAD54L2', 'LIPE', 'DUSP11', 'PPP1R26', 'ARPC5L', 'MPP6', 'IGSF11', 'TRIM58', 'RAF1', 'SUSD3', 'TPH2', 'BMX', 'HAUS3', 'ABCB10', 'ABHD8', 'SNORD27', 'CGNL1', 'C1QL4', 'HOXB2', 'DNASE1', 'TBX4', 'TRIM50', 'DPP3', 'SLC6A15', 'ARHGAP4', 'PTBP1', 'POTED', 'MAP3K9', 'HSF1', 'EMC1', 'TSPO2', 'OR5B3', 'NUDCD3', 'RRM2', 'PDSS2', 'WFDC11', 'TUBB7P', 'C10ORF32', 'RPL32P3', 'TUBGCP5', 'PRY2', 'TMEM133', 'EXOC6B', 'SARDH', 'ACTA1', 'LOC285627', 'VWA2', 'RPE', 'HEATR6', 'ZFP36L2', 'DUSP23', 'ELMO2', 'DTHD1', 'PEX5L', 'IRX2', 'STMN3', 'ECT2L', 'MSL1', 'UHRF2', 'RPL14', 'SLC17A4', 'EPHX1', 'CRISPLD1', 'SLURP1', 'LSM2', 'HDAC11', 'CACNB2', 'CRMP1', 'KIF20B', 'UBE4A', 'POU2AF1', 'GALNT11', 'SPRED2', 'SARS2', 'PANK3', 'RGPD8', 'PNN', 'STARD7', 'SF3B2', 'ENTHD2', 'CLEC4M', 'NSFL1C', 'ZBTB25', 'ACAD10', 'DHRS12', 'HM13', 'LAMB2P1', 'MOV10L1', 'TMEM167A', 'ADCY6', 'PACSIN1', 'DIRC1', 'PAQR3', 'PTPRC', 'WNT5B', 'KCTD9', 'PNMAL1', 'CYP4A11', 'SEC1P', 'ZNF606', 'KCNA10', 'LGMN', 'CA13', 'BRD7', 'WTIP', 'TTTY15', 'GOPC', 'NOTO', 'LOC392196', 'HBZ', 'NEDD8', 'SCARB1', 'CTDNEP1', 'PHF10', 'HDHD3', 'ANKRD20A9P', 'TIMM17B', 'DDAH2', 'SPAG5', 'TMPPE', 'CCNI', 'GLYR1', 'OR4D6', 'ADGB', 'RAD23A', 'FBXO5', 'PSMB7', 'FGF2', 'ADAM7', 'ADRBK1', 'TRUB1', 'ZMYM2', 'PKIG', 'PPP1R12B', 'HEXDC', 'ABHD2', 'RAMP2', 'HLA-DMA', 'OR8K1', 'SART1', 'ERH', 'KRT6A', 'MFSD6L', 'KIAA1467', 'EDNRA', 'DOCK4', 'STAMBP', 'C4BPA', 'STRC', 'PIWIL2', 'RHOJ', 'WRB', 'TNRC6C', 'DHX33', 'LMO3', 'GIMAP5', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.935405669804358 Spearman Correlation: 0.9196240344203293 Coefficient of Determination: 0.8749837671021398 RMSE: 0.1341339728182455 NRMSE: 0.04860278745497699 MAPE: 1733.4419505123794 Pearson Correlation: -0.016233385321957602 Spearman Correlation: 0.00509482661878577 Coefficient of Determination: -20.536255070829192 RMSE: 1.5465980096896992 NRMSE: 0.7978405811201039 MAPE: 2217.736574673468 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 9.818610783076327, tolerance: 0.007742718020581794 positive)
Pearson Correlation: 0.8872336342939531 Spearman Correlation: 0.8753117439991928 Coefficient of Determination: 0.786510146783505 RMSE: 0.17528477804617654 NRMSE: 0.06351357998629485 MAPE: 1018.2347334339271 Pearson Correlation: 0.04992475597577793 Spearman Correlation: 0.05084103293058517 Coefficient of Determination: -6.560187062553474 RMSE: 0.9163441772198351 NRMSE: 0.47271273225405214 MAPE: 995.9664701278642 Predictor: RandomForests Pearson Correlation: 0.5848335354634439 Spearman Correlation: 0.5265253534447254 Coefficient of Determination: 0.1980887574229807 RMSE: 0.33971813783616867 NRMSE: 0.12309520176685582 MAPE: 977.511095045385 Pearson Correlation: 0.09374501030990562 Spearman Correlation: 0.08358458334891956 Coefficient of Determination: -0.05392543456392884 RMSE: 0.34213483639587855 NRMSE: 0.17649644896820113 MAPE: 151.40345466785865 Protein: CDH3 x_train_column_count: 75 x_train columns: ['GPR88', 'FUT9', 'NDUFB2-AS1', 'KLHL9', 'PSMA7', 'SERPINA3', 'RBM4', 'ENPP6', 'ETV6', 'CSK', 'ANKRD17', 'GALNT12', 'UBR4', 'COL13A1', 'ARHGAP30', 'CRP', 'ZNF425', 'RPS27A', 'TISP43', 'HOXB2', 'RAPGEF5', 'MNAT1', 'DHRS4-AS1', 'SLC25A21', 'SFXN3', 'SLC5A12', 'FAM95B1', 'EPHA2', 'AGAP3', 'CCDC36', 'HKDC1', 'HIST2H3C', 'XKR8', 'C12ORF50', 'SERP1', 'STARD13', 'CCSER1', 'OCEL1', 'TSPAN6', 'KIAA0319', 'FAM92B', 'RPL37', 'TOP3A', 'PIAS2', 'KRTAP10-2', 'BRAF', 'LEAP2', 'SAMSN1', 'COL6A6', 'ANP32B', 'PPP3R1', 'SNORD15A', 'ZNF510', 'THEM4', 'VTRNA1-3', 'CPA6', 'SNORD115-3', 'MND1', 'MAN1A2', 'SNORD19B', 'EGFL7', 'DDX21', 'FOXA1', 'MRPL30', 'SPATA31D1', 'SERTM1', 'UOX', 'HIST1H2BJ', 'CALB1', 'TCIRG1', 'COL8A1', 'LOC401010', 'C10ORF35', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.5340562685612661 Spearman Correlation: 0.526994471781488 Coefficient of Determination: 0.28521609798958314 RMSE: 0.17408645425158795 NRMSE: 0.12406919783598781 MAPE: 428.917678351996 Pearson Correlation: 0.3335539050457758 Spearman Correlation: 0.35121385553435835 Coefficient of Determination: 0.05971939944625593 RMSE: 0.20149595267263054 NRMSE: 0.17934025728735115 MAPE: 2294.0678751590945 Predictor: ElasticNet Pearson Correlation: 0.5307102575903364 Spearman Correlation: 0.5237006821614199 Coefficient of Determination: 0.28163266232660733 RMSE: 0.1745222836678456 NRMSE: 0.12437980790786779 MAPE: 439.2541396261673 Pearson Correlation: 0.3289000756861343 Spearman Correlation: 0.3480018454095438 Coefficient of Determination: 0.05784460111521128 RMSE: 0.20169673112096478 NRMSE: 0.17951895893422998 MAPE: 2365.015577693094 Predictor: RandomForests Pearson Correlation: 0.554271694694296 Spearman Correlation: 0.5458963199717898 Coefficient of Determination: 0.259313727931598 RMSE: 0.17721266062892266 NRMSE: 0.126297205288797 MAPE: 401.1157082162466 Pearson Correlation: 0.427751829830294 Spearman Correlation: 0.35996708188381404 Coefficient of Determination: 0.11874796440456314 RMSE: 0.19506872965426603 NRMSE: 0.17361974620775938 MAPE: 538.6004440249696 Protein: PTEN x_train_column_count: 886 x_train columns: ['MRPL19', 'ZNF696', 'AOX2P', 'ADGRG4', 'CDR2', 'FAM78A', 'FAM200A', 'KIN', 'BAP1', 'RC3H1', 'SPAG8', 'HDAC10', 'MICAL1', 'OR2F2', 'RPS4X', 'PDZK1', 'FGF3', 'KCNAB1', 'G0S2', 'ST3GAL2', 'FBXO7', 'GOLGA2P10', 'SNHG8', 'KRTAP21-2', 'ENDOG', 'HEMGN', 'UGT1A4', 'KCNMB3', 'IFNA21', 'BRD1', 'RFPL2', 'GGNBP2', 'WDR90', 'SNORD110', 'CDH23', 'DOCK11', 'ATP13A1', 'AFM', 'AGRN', 'SERAC1', 'PAX9', 'ZNF57', 'KRT74', 'KCNS1', 'PAIP2B', 'FUK', 'UBE2J1', 'ACSF2', 'CHMP4B', 'OR5R1', 'RTL1', 'FAM45A', 'C10ORF76', 'ZIC1', 'SNAI3', 'CAMKMT', 'MAG', 'ZNF467', 'HECTD3', 'MAT2A', 'SWT1', 'PIDD1', 'GUCY1B3', 'TREM2', 'NACAD', 'PTGER4P2-CDK2AP2P2', 'HAUS8', 'ZC3H10', 'SLC9C2', 'NR2E1', 'PLSCR2', 'CLVS1', 'UBB', 'SNAR-A3', 'CREBBP', 'SRP68', 'ADGRA2', 'CD109', 'FAM155B', 'CUL7', 'ATAD3A', 'MGMT', 'MAGEB10', 'HPCA', 'ALS2CR12', 'SAR1B', 'CRYBA1', 'ZNF692', 'ENOX2', 'ABCC3', 'TCEAL4', 'TMEM260', 'LRRD1', 'NHSL2', 'KLHL17', 'SLC17A9', 'LIN9', 'ABCF1', 'PAX4', 'ACE', 'GSPT2', 'SPDYE7P', 'SLC41A1', 'SCAND1', 'SNX11', 'SNORA19', 'GEMIN7', 'MRPL48', 'DMTN', 'MYO1G', 'FOXB2', 'GRXCR1', 'OR5AP2', 'TGM6', 'BAG3', 'TRIML2', 'FLJ23867', 'ZC4H2', 'PLGLB2', 'HERC4', 'RAB3B', 'R3HDM2', 'CECR5-AS1', 'DRD2', 'DNAJB3', 'LINC00158', 'SYNPO2L', 'COBL', 'BCL11B', 'CHD4', 'NEDD4L', 'RRN3P3', 'PDE4D', 'SLC51A', 'MALSU1', 'DHX16', 'LIG4', 'KRTAP5-4', 'KIAA0355', 'EIF1B', 'TBC1D17', 'SALL2', 'MRGPRG', 'LOC90768', 'PUS7', 'TFAP2E', 'PADI3', 'ZNF71', 'KRT15', 'FBLL1', 'OR2M3', 'VAMP3', 'TTTY5', 'IGIP', 'DAND5', 'RAB3A', 'ZNF625', 'CCDC91', 'ZNF766', 'RHPN1', 'ZBTB44', 'MROH9', 'GRIP2', 'KRT33A', 'ANPEP', 'NRSN1', 'TNS2', 'USP34', 'PSG1', 'FKBP9P1', 'ATP11C', 'LOC388955', 'KANSL1', 'DDX11', 'FAM89A', 'SNORA77', 'BTN3A2', 'KCNMB4', 'ODC1', 'PEX26', 'MSMP', 'KATNA1', 'SUPT5H', 'OGFOD3', 'HIGD2B', 'INIP', 'ARPC5L', 'BET1L', 'GABRG3', 'STX5', 'OR4N3P', 'MPP6', 'CDC25C', 'KRTAP23-1', 'SNORD114-22', 'PPFIBP1', 'CEP295', 'OR51A4', 'SNORA59B', 'FAM124B', 'SHARPIN', 'DUPD1', 'CNFN', 'SGK494', 'SNORD20', 'STAM2', 'MRPS11', 'PCSK4', 'PECR', 'FUCA2', 'SIGLECL1', 'C17ORF89', 'UTP15', 'STRADA', 'ANKRD7', 'TTTY2', 'BIRC5', 'MUC2', 'TRAP1', 'DNM2', 'CD14', 'ZFYVE26', 'PLCXD3', 'LRRTM1', 'MST1R', 'HSD17B6', 'TERT', 'NFIA', 'ARMCX6', 'GABRA6', 'C9ORF16', 'SPANXN1', 'OR8D1', 'FBXO34', 'PZP', 'TIAF1', 'IRX3', 'C4ORF36', 'ZNF843', 'NUMB', 'FDPSP2', 'PFN3', 'TSPAN1', 'RAB4A', 'EIF1AX', 'NFKBIE', 'GNAL', 'TRIM72', 'POU2AF1', 'NOMO1', 'PKD1L1', 'ORC3', 'FGF9', 'PGRMC1', 'PTPN11', 'LVRN', 'C1QB', 'CBFA2T2', 'ERVFRD-1', 'POGZ', 'DOK5', 'XPO5', 'GNA13', 'ATP6AP1', 'IQCF3', 'JAK3', 'MT1DP', 'RAB8A', 'BCAR3', 'ALG11', 'ABCC12', 'BLOC1S4', 'CDC20', 'SLC35D2', 'ARMC2', 'OPA1', 'PLEKHJ1', 'ELMOD3', 'SNORD115-38', 'KCTD9', 'ZNF470', 'RNF166', 'GMNC', 'UNC119B', 'TIFA', 'MUC20', 'TMED8', 'HMGB3', 'TMEM169', 'LSM6', 'FFAR3', 'KRT37', 'ANKRD12', 'HSDL2', 'C2CD5', 'DESI2', 'KLK12', 'SOD1', 'PARVA', 'NDC80', 'SGPP1', 'GNPDA2', 'YBEY', 'GSDMA', 'CTSL3P', 'CLDN10', 'ZDHHC5', 'OR6K6', 'PNLDC1', 'WRNIP1', 'RCN3', 'SPATC1', 'RPL31', 'KCND1', 'CASP7', 'COL9A1', 'FABP12', 'CD84', 'METTL9', 'A1BG-AS1', 'SRPX', 'FBXO6', 'PROSER1', 'ATM', 'MC4R', 'CDCP2', 'ETV1', 'IL16', 'PDCL', 'PLEKHG4B', 'STYXL1', 'TMEM184C', 'FAM131B', 'ARSB', 'BST2', 'PNMAL2', 'RIMS2', 'LCA5L', 'SNORD22', 'C1ORF159', 'EME1', 'LZTS3', 'XPOT', 'OSBPL9', 'CTNNB1', 'APOL5', 'ACTN1', 'PPP2R5D', 'SNORD114-25', 'MUC16', 'SNORD50A', 'VTI1B', 'PRRT2', 'ZBTB22', 'LMNB1', 'FOXJ3', 'FKBP4', 'CALML3', 'MMP1', 'CLPP', 'KIAA0930', 'GGA1', 'TBC1D15', 'KIF1B', 'ADGRA1', 'SNORA30', 'EHD3', 'SERTAD1', 'ALPI', 'CHCHD4', 'TOMM7', 'DDB1', 'RNF40', 'PSMG1', 'SNORA47', 'SEC24C', 'ALDH1B1', 'NSUN4', 'SGPL1', 'CPNE7', 'PLA2G1B', 'LOC100240735', 'C5AR2', 'GPR176', 'C1ORF229', 'GARNL3', 'SPOP', 'LRRC16A', 'IL31RA', 'RTBDN', 'CXCL14', 'MDC1', 'ADGRL2', 'FEZ1', 'CAMKK1', 'NDUFS4', 'PHLDA3', 'LY6D', 'GLS2', 'SCN11A', 'CTNNA1', 'RGS2', 'MAP1A', 'RAPGEF3', 'CFHR2', 'LRRC4', 'ATP10B', 'RPS19', 'SLC25A37', 'LCMT2', 'CLDN14', 'FEM1B', 'SMC4', 'CSDC2', 'YIPF4', 'SLPI', 'ZNF833P', 'DIRC1', 'TP53I11', 'C5ORF58', 'PRSS1', 'BOD1L1', 'SF3B4', 'C2CD4D', 'LOC646471', 'CDS2', 'MRPS16', 'CCDC176', 'FAM160A1', 'IMPAD1', 'GNAI2', 'DHRS7B', 'PIGC', 'NCOA2', 'DTX3', 'ZFYVE28', 'NOL3', 'CDC42SE1', 'CA5BP1', 'SPG11', 'DEC1', 'CST7', 'KLHL38', 'TENM1', 'PLCB4', 'CACNA1G', 'MARCH2', 'ERC1', 'PRSS12', 'VPRBP', 'ANKMY2', 'POM121L9P', 'FAM196B', 'WNT8B', 'GOLPH3', 'KIR2DS4', 'GTF3C6', 'ZKSCAN8', 'LAMTOR4', 'KIFC3', 'ADAMTS4', 'BHMT2', 'SNORD9', 'ZCCHC8', 'ABCB1', 'GCNT2', 'ADAM33', 'GNG5', 'SNORD43', 'IKBKB', 'HIST1H2BM', 'DCUN1D2', 'MESTIT1', 'VWA1', 'CRIP2', 'PPP1R1C', 'IGLL1', 'TIE1', 'TMA7', 'MTERF3', 'ISCA2', 'NUCB2', 'IL7R', 'PPP2R3C', 'GOLGA8CP', 'CTTN', 'CRTC3', 'ZFAND3', 'CXCL10', 'SHMT2', 'PARD6A', 'OSBPL7', 'PDCD5', 'NBPF3', 'CDKN2D', 'CWH43', 'KIF27', 'LONRF3', 'C9ORF3', 'SLC35G2', 'RPS27A', 'RMDN3', 'SCARNA10', 'VBP1', 'ARRB1', 'NAP1L6', 'RNF115', 'DDX25', 'GPR89A', 'SLC25A26', 'MAP3K6', 'CD82', 'SCARNA23', 'GRPEL2', 'RPL29P2', 'SMR3B', 'DHRSX', 'KRTAP5-2', 'RGS17', 'TSPAN9', 'AHNAK', 'EXOC5', 'DGAT2', 'OLFML2B', 'COG4', 'ANK3', 'RSPO4', 'REM1', 'COX6B2', 'LAG3', 'KDELR2', 'NIPBL', 'PNRC2', 'NUMBL', 'GOT1L1', 'PLIN4', 'EMID1', 'ADAL', 'SPPL2A', 'TMBIM1', 'RAB1A', 'CCDC101', 'GLT6D1', 'HSP90AA1', 'INHBA', 'PCNAP1', 'GSPT1', 'PSAT1', 'NUP210', 'PMS2P1', 'CTXN1', 'DHFRL1', 'CACNA1F', 'N6AMT1', 'PVRL1', 'ARPC1A', 'ADGRG5', 'NGFR', 'SSBP1', 'ZBED1', 'C5ORF51', 'FAM212A', 'FZD6', 'ZNF208', 'PHLDA2', 'LIMK2', 'ALX1', 'RNASE4', 'ARHGAP24', 'C2ORF71', 'FBXO46', 'G6PC2', 'ASMTL-AS1', 'DPY19L2P4', 'DEFB116', 'STAG3L1', 'CCDC154', 'C14ORF169', 'BRICD5', 'OR52A1', 'SNORD116-15', 'UNC5A', 'VHLL', 'PANX2', 'ANGPT2', 'CORO2B', 'SPRR2G', 'LRP5', 'ZNF567', 'C9ORF139', 'DIRC2', 'GTF2IRD1', 'ELN', 'FCGR1A', 'TMEM100', 'HRK', 'PRSS48', 'CR2', 'PRSS8', 'S100PBP', 'DAPL1', 'CSTB', 'NANOS3', 'PALM', 'TEP1', 'MEX3B', 'MLST8', 'BDH2', 'MTX1', 'CD36', 'TINAG', 'PQLC2', 'MAOB', 'MAGEE1', 'ACTRT1', 'RGL4', 'LRRK1', 'PCDH20', 'SNORA41', 'KIAA0232', 'INO80B', 'ZBTB46', 'CIDECP', 'AMER1', 'SNORD116-25', 'HORMAD1', 'ZNF69', 'THEMIS2', 'PRSS37', 'C3ORF30', 'CHPT1', 'ZADH2', 'NME1-NME2', 'CLEC18C', 'CCDC103', 'SMIM5', 'OR6W1P', 'CLEC2B', 'TELO2', 'IRF6', 'HIST2H3D', 'RNF139', 'ENAH', 'C11ORF94', 'FSCN2', 'NAA35', 'MRAP', 'SHISA9', 'FKBP1B', 'CCL19', 'ARL15', 'LYPLAL1', 'EIF3IP1', 'HIST1H1T', 'SLC25A11', 'ACLY', 'AK9', 'CIZ1', 'SYN3', 'SH3D21', 'RPAP2', 'HHEX', 'LRRC31', 'PHF2', 'ZNF131', 'OR52E2', 'FANCG', 'SCARNA20', 'LINC00887', 'ABLIM3', 'INTS6', 'ADAMTS10', 'S100G', 'FAM49A', 'MUS81', 'TNIK', 'ROR2', 'WNK2', 'TM6SF2', 'SAT1', 'LCE2D', 'SLC35A1', 'SPATS2', 'RFX4', 'PRAMEF9', 'C16ORF90', 'BAZ1B', 'CXORF57', 'ZNF75A', 'CSH1', 'TRAF3IP1', 'UBA7', 'RPL23AP32', 'MSANTD2', 'CMTM2', 'POU3F3', 'SREK1IP1', 'CYP4F35P', 'GFOD2', 'PGS1', 'FAM205A', 'CYP4F2', 'SCOC', 'ACOT11', 'ACOX1', 'MSN', 'TLL2', 'EQTN', 'CHEK1', 'MARVELD3', 'KRTAP27-1', 'PCGF1', 'HJURP', 'HNF4A', 'CCDC134', 'TUBAL3', 'CDK8', 'PPM1K', 'THRSP', 'TMEM187', 'SNORA14B', 'NUP62CL', 'SNORA64', 'ZFP41', 'B4GALNT1', 'SLC10A2', 'CCDC183', 'NT5C1B', 'FKTN', 'ASPN', 'CCL22', 'BOP1', 'MYF6', 'MRPS25', 'NF2', 'YLPM1', 'OLFM1', 'CFAP58', 'APOC3', 'PXDNL', 'CAMTA1', 'TPX2', 'RPAP1', 'EMC2', 'DCLRE1C', 'TRNT1', 'TM7SF3', 'ASPHD2', 'C20ORF194', 'IFIT5', 'PRORSD1P', 'ZC3H12C', 'RAD54L', 'KCNU1', 'SAMD13', 'UBR5', 'CMKLR1', 'PNLIPRP2', 'PDGFA', 'FAM218A', 'ZNF385A', 'ATXN1', 'LRPAP1', 'CDC26', 'HBB', 'ATP11A', 'TLX3', 'CST13P', 'ACTL9', 'MAF', 'VSX1', 'APOBEC3D', 'SNORD115-35', 'GABARAPL3', 'EFCAB10', 'ZSCAN12P1', 'CSAG3', 'SEBOX', 'OR1C1', 'CNTNAP4', 'LINC00636', 'C3ORF38', 'C14ORF79', 'CYP1A1', 'AKR1C8P', 'TNRC18', 'LINC01124', 'SIGLEC14', 'ECD', 'ASCL4', 'C22ORF31', 'MICB', 'BZW1', 'TSSK2', 'NUP160', 'HSBP1L1', 'EHMT1-IT1', 'C11ORF45', 'KLHL1', 'CDK3', 'TRMT1', 'RPS7', 'OXNAD1', 'MARCH10', 'MUM1L1', 'CTU1', 'RTKN2', 'ZNF268', 'CANT1', 'LINC00669', 'PBOV1', 'ARPC3', 'NPY4R', 'S100P', 'GALNT16', 'TIAM1', 'NFATC2', 'IMPG1', 'ATP5L2', 'TMEM92', 'C1ORF115', 'ARMC1', 'CSN1S1', 'SLC25A51', 'CLNS1A', 'DPCD', 'SRSF10', 'PLSCR3', 'GPX8', 'TMEM248', 'DEFB129', 'SLC39A4', 'GREB1L', 'ALPK2', 'CD320', 'ACACB', 'RUNX2', 'EXOC7', 'RCSD1', 'SLFN5', 'WIZ', 'FABP2', 'DNAJB5', 'PPP5C', 'PLD4', 'TUBB1', 'RSAD2', 'GPATCH2L', 'ALOX15B', 'WDR55', 'AKAP1', 'LINC00341', 'TTTY8', 'ATF1', 'SLC35F4', 'NDUFA10', 'DCAF4L2', 'RSPO2', 'SNORD88B', 'SMAD2', 'NHLRC4', 'LINC00662', 'TRMT61A', 'SHANK1', 'RUFY3', 'CETN4P', 'C4ORF45', 'BARX1', 'OPTC', 'LTA4H', 'CACNG2', 'TAZ', 'UBE3C', 'LRRTM3', 'VWCE', 'DNASE2B', 'EED', 'MAP2', 'TMC3', 'SLC28A1', 'FGF14', 'PPAT', 'CD99', 'SNORD115-7', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.4801898500179896e-14 NRMSE: 4.797643628168504e-15 MAPE: 5.184908491532929e-11 Pearson Correlation: 0.07695441421104696 Spearman Correlation: -0.005688350228805846 Coefficient of Determination: -4.594519290626845 RMSE: 1.7634802967930217 NRMSE: 0.2757376744262406 MAPE: 1762.0931353647052 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 1.2151764953179505, tolerance: 0.016979184196949017 positive)
Pearson Correlation: 0.9996780126626318 Spearman Correlation: 0.9993864385109782 Coefficient of Determination: 0.9993149802605247 RMSE: 0.014703435311043279 NRMSE: 0.0028442114111426955 MAPE: 21.206648319549917 Pearson Correlation: -0.0026919835138520787 Spearman Correlation: 0.039274803925235975 Coefficient of Determination: -2.9652144487476075 RMSE: 1.484644808092052 NRMSE: 0.23213897398046313 MAPE: 1173.2405944041557 Predictor: RandomForests Pearson Correlation: 0.5895074225646632 Spearman Correlation: 0.5453340707322284 Coefficient of Determination: 0.2771323385711778 RMSE: 0.477635579409451 NRMSE: 0.09239314055428872 MAPE: 174.3640204994566 Pearson Correlation: 0.38735283931997555 Spearman Correlation: 0.44916021396775524 Coefficient of Determination: 0.12906823044825078 RMSE: 0.6957949787288531 NRMSE: 0.10879446153214808 MAPE: 218.2002839123029 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['RAB30', 'LXN', 'ZNF596', 'SLC38A8', 'YPEL4', 'MT1A', 'ADAM12', 'SPATA5', 'GPR89A', 'C16ORF93', 'GJD3', 'PCDHGB4', 'SLC2A9', 'ZNF761', 'HSD17B1', 'SMIM19', 'TTLL2', 'ATP6V1G2', 'TRIM26', 'AGO2', 'CPNE2', 'SNORD50B', 'GYPA', 'SLC35F2', 'ASIC5', 'NDUFS5', 'CCDC54', 'AAMDC', 'MYCBP2', 'KRT6A', 'COX5B', 'BNIP3L', 'MTMR9LP', 'SNORA71B', 'RBM7', 'FOXL1', 'HEXIM2', 'LSM11', 'INHBA', 'CCNA1', 'GPC5', 'ZNRF2', 'TSSK2', 'OTOA', 'FGF23', 'FGF6', 'KRTAP5-8', 'SHFM1', 'SNORA61', 'MTUS1', 'TONSL', 'DENR', 'VPS25', 'DDX41', 'TAF9B', 'FAM92A1', 'HVCN1', 'GYPB', 'OR6C68', 'LRRC40', 'CHST1', 'LOC90246', 'PLN', 'ZFP90', 'GLE1', 'PITHD1', 'HEY2', 'ZNF454', 'RHBDF1', 'ME1', 'BTD', 'TTTY17A', 'SYNM', 'RAB39A', 'SECISBP2L', 'TSNAX', 'NDUFAB1', 'ABCA5', 'AWAT1', 'UPF3A', 'MORN4', 'TIMM17A', 'KIAA0556', 'TMEM138', 'PRDM13', 'HOXA13', 'FAM224B', 'CACNG2', 'TSIX', 'OLFM3', 'L1TD1', 'GSTT2', 'CCR4', 'NFKBIB', 'CCDC101', 'SMARCD3', 'CCNH', 'LSG1', 'HIST1H1T', 'HMP19', 'DMP1', 'GJA4', 'GGA1', 'TUBD1', 'ARID5A', 'SNRPE', 'KRT71', 'ZNF280D', 'RIBC1', 'PSD', 'RAB40B', 'RTTN', 'ATAD1', 'CACNA1D', 'LCE3B', 'LOC285740', 'SCN9A', 'LAMA3', 'SLC16A10', 'KMO', 'LYRM7', 'IFI30', 'ZNF324B', 'HIPK4', 'ABCC12', 'WDR81', 'ATP10D', 'AIG1', 'OBP2B', 'LRRC8E', 'CCKBR', 'DLG1', 'C16ORF86', 'KLF13', 'LINC01512', 'OR52B2', 'PAX9', 'CA11', 'DYSF', 'ATXN1L', 'CCDC186', 'MYLK4', 'MDC1', 'CCDC64', 'RPUSD1', 'GK2', 'DYRK4', 'MTX1', 'CATSPER2P1', 'ADGRG5', 'ING4', 'TIGD3', 'SPDYE7P', 'TSR2', 'PAGE1', 'ASRGL1', 'OTUD7A', 'ABI3BP', 'MMACHC', 'AP5M1', 'CUL3', 'CLDN7', 'IGFL1', 'NAPB', 'HAPLN2', 'TRIM72', 'PCDHB17P', 'PDE4DIP', 'ZNRD1', 'DDX17', 'PSMD3', 'LOC285627', 'TK2', 'COMMD2', 'GPRIN3', 'TSC22D2', 'B3GNT8', 'PMP2', 'DMBX1', 'KAAG1', 'RGS7BP', 'COA1', 'COX5A', 'RFX4', 'FBXW7', 'ACCS', 'MTIF3', 'GFOD2', 'FZD5', 'PRRC2C', 'SENP3', 'CLIP2', 'KCNC1', 'FERMT2', 'PCDHB8', 'BTK', 'KDM5D', 'SETD9', 'TIMM9', 'LCMT2', 'FTH1', 'CDK1', 'FAM183A', 'RARS2', 'CHSY1', 'OSGIN1', 'TELO2', 'UNG', 'VSTM5', 'TBC1D19', 'ARPC4', 'LOC100129550', 'NR1I3', 'GAGE8', 'DBP', 'ANKRD39', 'TMA16', 'ARMT1', 'BPIFA4P', 'KLHL24', 'KIAA1024', 'WBP2NL', 'CLPB', 'PDLIM1', 'PLEKHH1', 'SEPT10', 'AP3S2', 'PSMD13', 'LDHAL6A', 'BCL2L10', 'SSX2IP', 'PNPO', 'RAB11FIP3', 'TEC', 'ST6GALNAC1', 'N4BP2L2', 'VCAN', 'TCOF1', 'TMIGD1', 'ZNF607', 'RIC3', 'GSKIP', 'RNF139', 'LINC00654', 'TYROBP', 'CYSLTR1', 'APP', 'KIAA0930', 'CEP250', 'R3HCC1L', 'SLC27A2', 'BAHCC1', 'IPO8', 'FGF11', 'AP3B1', 'GHRL', 'OR5K4', 'GRIN2D', 'PFN4', 'MYCNOS', 'PLAGL1', 'TECPR2', 'FAM19A3', 'FDXR', 'ZBTB44', 'ZNF853', 'RPL31P11', 'INTS8', 'PNN', 'FAM83F', 'NUDT19', 'ZNF75A', 'RLTPR', 'COL22A1', 'RTN4RL2', 'EPHB3', 'CHD4', 'RND3', 'B4GALT4', 'KLF8', 'WDTC1', 'TRMT10A', 'MAP3K11', 'LY6G6D', 'TNNT2', 'WDR55', 'KIAA0100', 'HTRA3', 'WSB2', 'TCEAL8', 'TMEM108', 'GYLTL1B', 'MVK', 'CLDN22', 'GOT2', 'ZNF623', 'KLHL31', 'TNFAIP3', 'ITGAL', 'PRRG4', 'ZC3H12B', 'PRELP', 'LINC00628', 'AFAP1', 'SELPLG', 'SKIDA1', 'BSPRY', 'MST1P2', 'DKK2', 'E2F5', 'SCN2A', 'DGKG', 'STUB1', 'HIST2H3C', 'N4BP2L1', 'DOPEY1', 'TGM3', 'OCIAD2', 'GLT8D1', 'CXCR2', 'RBM26', 'FKBP15', 'FOXL2NB', 'OR12D3', 'ADAMTSL1', 'LAPTM4B', 'HIST1H4K', 'SSX4', 'STAP2', 'CCDC25', 'SUSD4', 'RAB6C', 'PPARGC1A', 'SLC13A4', 'RPL3L', 'PARP8', 'SECTM1', 'CLINT1', 'DNAJC22', 'ETS1', 'GDF3', 'KMT2B', 'SCARNA12', 'IPPK', 'TMEM104', 'VTI1A', 'CRADD', 'LINS', 'TM9SF3', 'CPXM2', 'AARD', 'LY6G5B', 'TAB3', 'TXNIP', 'KIAA1875', 'JAM2', 'RAB9B', 'TLR9', 'FAM65A', 'ZNF799', 'TMEM140', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.8481833406824093 Spearman Correlation: 0.8221062245170566 Coefficient of Determination: 0.7194149794111724 RMSE: 0.10159554309301531 NRMSE: 0.06545050287841218 MAPE: 179.75705705022622 Pearson Correlation: 0.06303513375919104 Spearman Correlation: 0.08336512924101298 Coefficient of Determination: -78.54744894934889 RMSE: 1.8560968048152848 NRMSE: 1.8032437310579756 MAPE: 1276.9954005463576 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.07120815461733176, tolerance: 0.001979097117455079 positive)
Pearson Correlation: 0.819665856732063 Spearman Correlation: 0.780060806707042 Coefficient of Determination: 0.6711224782154075 RMSE: 0.10999159780006255 NRMSE: 0.07085946065392981 MAPE: 194.01964796341917 Pearson Correlation: 0.08043695866442056 Spearman Correlation: 0.16152071721592542 Coefficient of Determination: -66.05395779990818 RMSE: 1.7041181548142825 NRMSE: 1.6555927318439367 MAPE: 713.8430228947641 Predictor: RandomForests Pearson Correlation: 0.5856373897499045 Spearman Correlation: 0.4921027070570803 Coefficient of Determination: 0.17107910500191248 RMSE: 0.17462200035817138 NRMSE: 0.11249605434573773 MAPE: 132.37775851648962 Pearson Correlation: 0.3467252147846855 Spearman Correlation: 0.3559071808875423 Coefficient of Determination: 0.06806376630280397 RMSE: 0.20090030383092328 NRMSE: 0.1951795900466558 MAPE: 145.89434083846754 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['ARF6', 'STAT3', 'MLST8', 'UBA5', 'GIMAP6', 'USP36', 'FTO', 'DHRS4-AS1', 'PHF19', 'TIPRL', 'HIST1H4H', 'TNFRSF8', 'PCDHB8', 'C16ORF13', 'PCYT1B', 'MYH8', 'NCL', 'TSPAN4', 'TPSAB1', 'PABPN1', 'NTN4', 'OR5K4', 'NRTN', 'LRTOMT', 'SLC6A4', 'CFAP57', 'ZNF763', 'ELSPBP1', 'GDF2', 'LXN', 'CBR4', 'CSF1', 'MIR100HG', 'TDP1', 'GOLGA6L9', 'SVOPL', 'SPRTN', 'TMEM219', 'SEPT12', 'G6PC3', 'ANKRD34B', 'SERGEF', 'ZNF622', 'RPL23AP64', 'EBF2', 'ENO3', 'FBLN2', 'LINGO3', 'USP43', 'DLGAP1', 'CCDC6', 'CLK2P1', 'MBNL3', 'UBE2QL1', 'CTTNBP2NL', 'AHCYL1', 'SPATA24', 'GDF9', 'GATA6', 'MCM4', 'TTI2', 'CASP1', 'ILF2', 'GMPS', 'PLEKHB1', 'ATG4D', 'RGS22', 'PHKB', 'ACKR2', 'KCNK12', 'RRN3', 'ARMC12', 'UBE4A', 'WRNIP1', 'HLA-DQA2', 'SPAG7', 'ATP1A3', 'CYP3A43', 'TNS1', 'ZNF592', 'ZNF587', 'GCLC', 'C20ORF27', 'HRASLS', 'TMEM87B', 'PGM5-AS1', 'MBOAT4', 'KRTAP3-2', 'TGM1', 'MDN1', 'LINC00032', 'SMARCAD1', 'TTTY6', 'SUCLG1', 'ZBTB21', 'TEX37', 'CSAG1', 'FAM110B', 'ANG', 'FEN1', 'MRC2', 'HMSD', 'CAMK1', 'LYPD5', 'CTDSPL2', 'VWCE', 'RBM24', 'RETN', 'SNORD114-25', 'HOXB6', 'DRAXIN', 'EGR2', 'MESP2', 'ZNF287', 'SCD5', 'ASPA', 'PDZRN4', 'NRARP', 'CRYBB1', 'ARMCX1', 'MARK1', 'GOLGA8B', 'NTSR1', 'PTGES3', 'APOA1BP', 'PPM1H', 'RBMS1', 'BAG2', 'ACMSD', 'POLH', 'PANK3', 'FICD', 'RHCE', 'NAT1', 'FIGF', 'FLG2', 'LOC200726', 'SNORA28', 'CROCC', 'RBPMS', 'ZFP92', 'ELAC2', 'BCAS4', 'RNASEH2C', 'PPM1E', 'OR8H2', 'NOL11', 'CERCAM', 'ZBTB40', 'TMEM160', 'PRSS3P2', 'CCDC127', 'HBBP1', 'RAD18', 'ZNF137P', 'EXOC2', 'PSMG1', 'WASH3P', 'PLIN5', 'CSNK1G3', 'BUB1', 'ARRB1', 'C7ORF13', 'ALS2CR12', 'DYNLRB1', 'DNASE1L3', 'B4GALT1', 'UGT2A3', 'AGFG2', 'ERRFI1', 'SNORD116-24', 'TAAR5', 'ASB7', 'PRDM1', 'RSF1', 'ZFYVE9', 'IWS1', 'MSMB', 'MTMR11', 'TERT', 'TRIM16', 'SP140', 'SLC16A6', 'EZR', 'HAVCR2', 'ADAMTS9', 'PRR22', 'STK11', 'ARHGAP39', 'KRT20', 'ZNF48', 'IGF1', 'TAGAP', 'VENTX', 'CPSF7', 'ATRN', 'SERPINA5', 'PLCD1', 'CDRT15P1', 'LOC256880', 'CCDC43', 'SNORA21', 'BACH2', 'IFNAR2', 'SNX9', 'MRPL45', 'ZBED4', 'RANGRF', 'HMGCL', 'CHCHD3', 'OR5AN1', 'ATP6V1C2', 'MCM3AP', 'PASD1', 'KLF8', 'LRRC1', 'GPR176', 'PLK3', 'CFAP221', 'TBX2', 'NT5DC1', 'ITGBL1', 'ECH1', 'SLC25A43', 'SPRR3', 'NFKBID', 'OR10A5', 'AOC1', 'SEC24B', 'PABPC1P2', 'ETV5', 'CCDC112', 'EDC4', 'TRPV2', 'SH3PXD2A', 'LSS', 'NAA10', 'SSH1', 'LOC284441', 'OR3A4P', 'OTUD3', 'LRRC34', 'DNAJC16', 'MUC5B', 'PPL', 'SLC25A44', 'PCBP3', 'BEND3P3', 'NR1I3', 'H2AFX', 'CLIC6', 'SPATA32', 'IL17RA', 'GPRC6A', 'HECW1', 'TAS2R40', 'NGDN', 'OR2H2', 'GP6', 'C1ORF158', 'GDF7', 'PSG8', 'MAP1S', 'IL1RL1', 'C16ORF90', 'OSBPL10', 'RAC2', 'VCX3A', 'PRO0628', 'EREG', 'LRRC41', 'GTF2H2', 'CXCL11', 'CCT6P1', 'FGFR4', 'LTBR', 'BUD13', 'DLX5', 'BPNT1', 'OSBPL1A', 'EPN2', 'DLX3', 'RFPL4B', 'ZCCHC12', 'ZMYM2', 'KTN1-AS1', 'CUL3', 'DHX36', 'CCND1', 'HINT1', 'MYL12B', 'HTR5A', 'CHRM5', 'CLN3', 'FOCAD', 'COQ10A', 'CTSE', 'HSPA2', 'EXOC5', 'RHBDL3', 'LINC00593', 'BRF1', 'TMEM200C', 'NRIP1', 'PAN3', 'SLC52A3', 'FSHR', 'B3GALNT1', 'ZW10', 'COPS3', 'PEX11G', 'SUGT1', 'ANXA2P3', 'WRAP53', 'TCL1B', 'HIST1H3J', 'HDGFRP2', 'FRRS1L', 'MNAT1', 'PDP1', 'SNORA69', 'GPAT2', 'TMPRSS4', 'ZNF18', 'C1ORF21', 'TYK2', 'DIRAS1', 'EEF2', 'CABLES1', 'CFAP70', 'POU4F1', 'PLAC9', 'CCRN4L', 'RNF24', 'ZNF205-AS1', 'OR5W2', 'COX4I2', 'NAP1L1', 'C17ORF53', 'OR4N4', 'ZNF25', 'ADAM22', 'KCTD16', 'MEGF11', 'SNORD49A', 'RPL13P5', 'UXS1', 'NSFL1C', 'GFI1B', 'LETM2', 'LINC00923', 'C4ORF45', 'PREX1', 'EVA1A', 'PLB1', 'TEPP', 'FAM222B', 'ESYT2', 'ZNF782', 'CHRNA5', 'SSTR4', 'ARPC3', 'FABP5', 'GIMAP8', 'SPOPL', 'CLTB', 'C9', 'RNF222', 'FAM134A', 'PRMT6', 'SCN8A', 'SRMS', 'ZEB1', 'LOC81691', 'KHDRBS2', 'DNAJB8', 'AKAP3', 'RAMP2', 'CEACAM16', 'ZNF385D', 'BDH1', 'ERLEC1', 'CT83', 'GAPDH', 'SUGP1', 'KRTAP5-8', 'HCG27', 'OMD', 'PTPN1', 'TBC1D8B', 'ZNF235', 'CLDN1', 'TRHDE', 'KRTAP11-1', 'FEZF2', 'TUBA4B', 'CKMT1A', 'PUM2', 'SNORD43', 'TAS2R10', 'HNRNPL', 'SDHA', 'SMIM10L2A', 'BTG1', 'LAMTOR3', 'MAP3K7CL', 'ZDHHC6', 'HIST1H4F', 'GSTA2', 'NEUROG3', 'FLJ44635', 'NDC1', 'LIPE', 'PDK1', 'ABHD14A', 'IRX6', 'UBXN11', 'ZNF134', 'RASL10A', 'PLA2G2F', 'KDM3B', 'CENPI', 'FAM185A', 'PKHD1', 'APH1B', 'UBAP2', 'DHX58', 'SNORA24', 'ZNF594', 'AHSA2', 'B3GALT5-AS1', 'HOXB7', 'VRK3', 'WNT7B', 'GSKIP', 'ZNF780A', 'KCTD4', 'HBG2', 'GAP43', 'ZNF418', 'BPHL', 'C11ORF73', 'TMEM26', 'SON', 'TJP1', 'HYAL1', 'IPO5', 'EML3', 'ANAPC1', 'WBP2NL', 'PLEKHO1', 'LIMD2', 'OR4K5', 'GNAI1', 'STAM2', 'ZSWIM6', 'FABP7', 'NLE1', 'SERPINA10', 'PCAT18', 'DMRT1', 'SLC2A1', 'WT1-AS', 'RTL1', 'CLEC3B', 'AKAP1', 'FAM169A', 'SPINK4', 'USP32P2', 'FBXO47', 'TMEM175', 'AP5S1', 'NKX2-4', 'ADCK5', 'TROVE2', 'CACNA1F', 'DUSP5', 'ZNF428', 'XKRY2', 'HMHB1', 'ANKRD32', 'FANCI', 'NTN5', 'FBXO9', 'DIRC1', 'TBC1D10B', 'EARS2', 'INSL4', 'GPR142', 'LMBR1', 'FERD3L', 'TAF9', 'TFE3', 'TYW5', 'MRPS31', 'FASTKD1', 'CCL27', 'PROX1', 'MYT1', 'B3GNT7', 'ZDHHC22', 'PIK3R1', 'ZNF562', 'CACNA1I', 'CAPG', 'CEP97', 'ACADS', 'CAMK2A', 'PIKFYVE', 'TCEAL6', 'PCDHA9', 'LOC285627', 'S1PR2', 'PSPN', 'GJB1', 'POLE4', 'GPR61', 'FLYWCH1', 'HPYR1', 'WAPAL', 'AGO3', 'PRSS48', 'LIN37', 'EMB', 'SGCZ', 'TRIM68', 'BCR', 'RER1', 'HIST1H3E', 'SPEF2', 'NYNRIN', 'LRSAM1', 'FAM168A', 'JPH4', 'LSM8', 'TMEM8B', 'IGFBP5', 'RHOD', 'DDX27', 'NDUFB5', 'HLA-DOA', 'LOC100287704', 'OR6Y1', 'CLIP4', 'POLDIP3', 'DCAF16', 'ZUFSP', 'TNP1', 'SURF6', 'SRCIN1', 'PCNXL3', 'ATF1', 'CCSER2', 'CALML5', 'OSGEPL1', 'COL23A1', 'SNORD116-4', 'EPHB2', 'DHRSX', 'TTC37', 'PFN1', 'RASGRF1', 'EGFL6', 'FOXE1', 'SCRIB', 'HP', 'SYP', 'KCNB1', 'ERP29', 'EDNRB', 'ZNF488', 'TEFM', 'CDKN2D', 'RBM34', 'IL2RA', 'TEKT4P2', 'SDHC', 'ITGB3BP', 'DEFB134', 'KRT25', 'GIMAP1', 'LINC01119', 'TBC1D23', 'PRKG1', 'SNX29P2', 'CTRC', 'RIN3', 'LINC00628', 'LAMC1', 'LRIG1', 'PPAPDC3', 'LOC401127', 'CT55', 'SPEF1', 'DPYSL4', 'C6ORF25', 'NXPE1', 'TCTEX1D1', 'CRIP2', 'RBMS3', 'SLC7A13', 'TRPV3', 'SLC35B1', 'SNORD65', 'EVC', 'B4GALNT3', 'TPR', 'TSPAN17', 'PIWIL3', 'ANKRD9', 'SNORD35A', 'MYH2', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.3271356376636084e-13 NRMSE: 3.0001935970693076e-14 MAPE: 9.539760190766776e-11 Pearson Correlation: 0.09713659121316401 Spearman Correlation: 0.17401463858651606 Coefficient of Determination: -144.50150229861532 RMSE: 7.607458903104148 NRMSE: 2.292093673728276 MAPE: 3388.491701634387 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 5.341885575866966, tolerance: 0.024436786734185888 positive)
Pearson Correlation: 0.9904378384844913 Spearman Correlation: 0.9868647787551904 Coefficient of Determination: 0.9808556905273971 RMSE: 0.09325041313235102 NRMSE: 0.021080685686074605 MAPE: 93.40822591180114 Pearson Correlation: 0.006881555410123823 Spearman Correlation: 0.02011745782366364 Coefficient of Determination: -11.3907049715156 RMSE: 2.2200046512213807 NRMSE: 0.668877568912739 MAPE: 1326.1374560012287 Predictor: RandomForests Pearson Correlation: 0.6831674188383121 Spearman Correlation: 0.6113759091874175 Coefficient of Determination: 0.45729892605491307 RMSE: 0.49649085325734915 NRMSE: 0.11223937001409497 MAPE: 221.37581133772173 Pearson Correlation: 0.5783272065556534 Spearman Correlation: 0.4854024883287763 Coefficient of Determination: 0.32252428971562597 RMSE: 0.519102046050142 NRMSE: 0.15640314734864175 MAPE: 146.55522162903986 Protein: TP53 x_train_column_count: 1002 x_train columns: ['PAXIP1', 'LOC644936', 'SH3BGR', 'KRTAP11-1', 'LGSN', 'SMAD9', 'XKR5', 'ATP6AP2', 'POLR2H', 'ZAP70', 'AGAP6', 'SHISA6', 'ZNF554', 'SPDYE1', 'PDHA2', 'LOC407835', 'SPOCK1', 'EFCAB8', 'ARSE', 'C15ORF56', 'GALR3', 'FAM43B', 'PPIB', 'ZPLD1', 'TMEM143', 'CHST8', 'DNALI1', 'SPIC', 'ESRRB', 'CDKN2C', 'KHDRBS2', 'GGH', 'SPAG17', 'NFAT5', 'C21ORF2', 'HP', 'KRTDAP', 'SMAD2', 'TRIM55', 'NOL6', 'SLC4A11', 'BST1', 'NAA11', 'FAM71A', 'PTRF', 'ATP4A', 'PLCD1', 'DENND2C', 'ABHD15', 'MGC15885', 'DNAJB1', 'EDN3', 'CMKLR1', 'AMMECR1L', 'MAN2C1', 'BAP1', 'GTF2H4', 'PRSS53', 'TIA1', 'CYB5D1', 'IGF2', 'SPICE1', 'ZC3H7A', 'SCNN1D', 'HTATIP2', 'PARN', 'ZFAND1', 'ANKRD28', 'LOC646813', 'RTN4', 'MPZL1', 'LOC284578', 'RNF135', 'IL5', 'LINC00472', 'GAMT', 'HS6ST3', 'SEC22C', 'RUFY2', 'SNAR-E', 'LHFPL2', 'SNORD45C', 'MLH3', 'GMFG', 'HSPA1A', 'ADD2', 'TMEM200B', 'UCP2', 'ID2', 'LOC440173', 'BCL2A1', 'PLOD3', 'HIGD2A', 'DPT', 'NPFFR2', 'KANSL2', 'CCDC107', 'MLLT3', 'SLC22A2', 'EIF3B', 'FZD3', 'PHOSPHO2', 'ZFYVE27', 'GATAD2B', 'PIP5K1C', 'MTG2', 'HAPLN2', 'NPTX1', 'FUNDC2P2', 'TOLLIP', 'S100A5', 'ZYG11A', 'ZNF619', 'ZNF546', 'C10ORF90', 'OR2T33', 'PKD1L1', 'TACC1', 'S100A7L2', 'HEATR1', 'TTC39A', 'SNORD65', 'RTP3', 'G6PC2', 'VAT1', 'FAM184A', 'FRY', 'UGGT2', 'FGF21', 'ALPK3', 'ZNF808', 'CS', 'SPP1', 'SNORA79', 'PID1', 'CLCN7', 'C17ORF70', 'CHRM4', 'KLHL40', 'FAHD2CP', 'PLAC1', 'DDX31', 'PLEKHS1', 'C19ORF38', 'GPR151', 'PPP1R15B', 'DYNLT3', 'RASGRF2', 'FLT4', 'HSPA9', 'FAM178B', 'SRRM4', 'RPS15AP10', 'ADAM12', 'LY6H', 'SPIN2B', 'OR10A6', 'CD40', 'MPV17', 'CDKAL1', 'CWH43', 'H2AFZ', 'KIAA0907', 'ANXA11', 'MSL2', 'TEX29', 'ZNF718', 'CHCHD6', 'EEF1DP3', 'MAPK1', 'HMGXB3', 'KRTAP10-4', 'ARMC5', 'GTF2IRD1', 'SMC5', 'ZBTB26', 'GLUD1', 'GCSAML', 'IVL', 'PQLC2', 'ITPK1-AS1', 'CD7', 'SOX18', 'RLN1', 'FN3K', 'CKMT1A', 'SNORA70', 'TMOD4', 'TRO', 'BPIFB3', 'C12ORF49', 'C19ORF40', 'ACTL6B', 'GALNT10', 'FLVCR1', 'OR4K17', 'ALPPL2', 'TMEM50B', 'GPR176', 'HMGA1', 'GPR161', 'ATXN7L3', 'ZNF605', 'FMO4', 'WNT3A', 'EBNA1BP2', 'SRA1', 'WDYHV1', 'ANKRD26P1', 'XDH', 'FAM209A', 'GRK1', 'ISPD', 'HOXC6', 'CACNA1D', 'FAM111B', 'SPATA31A6', 'SLC35D2', 'NSMCE2', 'CORO6', 'THUMPD3-AS1', 'BAK1', 'RGS7BP', 'DHX35', 'DPY19L1', 'RS1', 'C11ORF42', 'PNRC2', 'NSRP1', 'RPS6', 'SPOP', 'RNF151', 'WNT8A', 'LMCD1', 'TRIM44', 'MORF4', 'KDSR', 'FOXC2', 'ASB2', 'AP3M1', 'OR2H2', 'GABARAP', 'CWC22', 'OLFM3', 'ZNF558', 'LIX1', 'KCNJ4', 'CEBPE', 'OR10G3', 'NETO1', 'BTG2', 'LIPM', 'IGFL4', 'TPTEP1', 'MAP1LC3B', 'EIF5A2', 'TERT', 'AKT3', 'OPRK1', 'CLDN7', 'MID2', 'ADGRF4', 'HIPK3', 'TM4SF20', 'OR5H15', 'ATAD5', 'RRS1', 'TBCE', 'RTEL1', 'COL9A2', 'TMEM216', 'TMPRSS3', 'APH1A', 'RASA2', 'SPSB2', 'TRIM75P', 'ITGAX', 'OGDHL', 'SECTM1', 'USP1', 'ASAP1', 'SNORD119', 'TTLL11', 'TM7SF3', 'CD72', 'SLC35F6', 'GPR135', 'SNORD115-39', 'LGALS3BP', 'CACYBP', 'OR1N2', 'ZNF844', 'ELAVL4', 'ZBTB43', 'SNORD29', 'PUSL1', 'WDR13', 'FAM78B', 'FBLIM1', 'BAHD1', 'TMEM182', 'APCDD1L', 'ITGB1BP1', 'SEPN1', 'LUC7L', 'TRIO', 'LINC01184', 'NEO1', 'MRPL40', 'TMEM8C', 'KMT2D', 'ZNF439', 'TBL1X', 'MON1B', 'SLC25A53', 'LINC00667', 'MCF2', 'XAGE3', 'CDKN2AIP', 'TEDDM1', 'DNAL4', 'ALDH9A1', 'RANBP9', 'AIG1', 'CAMTA2', 'SLC22A13', 'P3H4', 'OR10H1', 'TMEM41B', 'BARX2', 'TRPM1', 'WDHD1', 'DKK1', 'LOC284023', 'FZD8', 'TTR', 'RPA1', 'ACBD3', 'PDIA3P1', 'POU3F2', 'KCNH8', 'KLHL7', 'SUOX', 'CEL', 'SNAPC3', 'JAZF1', 'PLRG1', 'CYP4F3', 'ENDOD1', 'FBXO24', 'OR8U1', 'EXOSC4', 'CDKL1', 'SCARNA4', 'UBE2J2', 'FEZF2', 'SYT12', 'EBF4', 'NDUFAF5', 'ALKBH7', 'CDH17', 'OR2J3', 'FAM110C', 'LRRC59', 'SPTSSA', 'TSHB', 'CDK20', 'CABP4', 'SLC25A40', 'FBXO27', 'RGS7', 'ZNF233', 'GOPC', 'PRPF4', 'AKR1B15', 'AMPH', 'CTSL', 'SPDYE4', 'RFC3', 'SNORD78', 'MANSC1', 'LOC153910', 'NTN5', 'PIAS1', 'OR5K4', 'TMEM31', 'CBS', 'SND1-IT1', 'STON2', 'RPL30', 'FAM175A', 'SNORD37', 'DOLPP1', 'SDHAF2', 'NIPAL4', 'TMEM187', 'DLG2', 'VAX2', 'SLC52A1', 'SLC19A3', 'INCENP', 'CDH20', 'ERO1L', 'ZNF217', 'MAML2', 'SYNPO2L', 'ST8SIA4', 'SEC24A', 'TMEM38B', 'POP1', 'IRGQ', 'CNNM4', 'MMP13', 'NMT2', 'SPRR2G', 'CSRNP1', 'KPNA2', 'DDO', 'WFDC6', 'KIAA0513', 'C15ORF57', 'MALL', 'LINC00167', 'TRIM5', 'ZNF530', 'ABCA3', 'C1QTNF2', 'MUS81', 'OR2B3', 'PTCH2', 'SLC25A32', 'SPINK1', 'DNAH12', 'CDAN1', 'ALS2CR11', 'SALL1', 'ANKRD13A', 'AQP6', 'LRP10', 'ANAPC15', 'SIPA1', 'LAMC1', 'HNRNPU-AS1', 'SNORA34', 'MTMR6', 'MSMO1', 'EPHX4', 'MST1R', 'KIAA1210', 'MYLIP', 'SLX4', 'ZNF644', 'RNASEH2A', 'P4HA3', 'IL32', 'SNX1', 'C2CD4C', 'KAT6B', 'RHBDL2', 'MAFF', 'C9ORF117', 'STMN2', 'MRTO4', 'GYS2', 'NCK1', 'EBPL', 'LOC440461', 'SSR3', 'ARSF', 'DCAF6', 'HEXIM2', 'HES2', 'ELSPBP1', 'NDUFAF1', 'CD40LG', 'FAM210A', 'LARP6', 'TUBB', 'TMCO3', 'VWA8', 'PTPN4', 'ERC2', 'MIR99AHG', 'SMPDL3A', 'FAM160A2', 'EXOC3L2', 'CREG2', 'ANKFN1', 'ESCO2', 'FXYD5', 'RBM12', 'CDHR5', 'FAM106CP', 'HIST2H3C', 'STEAP2', 'GNPDA2', 'LLGL1', 'IL22RA1', 'DAPK2', 'NDUFB2-AS1', 'KIAA0754', 'SLC44A2', 'DUOX2', 'DMP1', 'PLN', 'PCDHGA3', 'SUPT3H', 'OR2T5', 'UPK3B', 'FUT10', 'PDIA6', 'LBX2', 'TTPA', 'DHX34', 'HACE1', 'ZNF503', 'NUTM2A-AS1', 'PELI1', 'OR4K15', 'IRF2', 'SLC22A3', 'CNGA2', 'SARAF', 'AARS', 'LEPROTL1', 'GLYATL3', 'CLN6', 'BCL9', 'FRZB', 'HOXA13', 'SYK', 'UQCRB', 'SPRR1B', 'VPS35', 'MSN', 'PDLIM5', 'TANGO6', 'C6ORF223', 'FCGR1A', 'ZNF140', 'LINC01566', 'NDST3', 'TMEM179', 'LOC100130093', 'BRDT', 'SPNS1', 'LOC151174', 'HIST1H4G', 'RNPS1', 'TAP2', 'NEMF', 'GCM1', 'SPAG5', 'YAP1', 'CMTM3', 'APOPT1', 'ZHX2', 'RASEF', 'PARPBP', 'CKAP2', 'GPT2', 'TRIP4', 'ATG7', 'AP2A1', 'MTHFR', 'TRIM35', 'PTPRZ1', 'USP44', 'PITX2', 'NUP107', 'NUDT18', 'ITFG2', 'FOXF2', 'ALDH3B2', 'C2CD2L', 'C17ORF102', 'BOLA2', 'NAPSA', 'KIAA1958', 'ADRA2A', 'PLEKHA7', 'CSN2', 'STAT5B', 'C1ORF186', 'NAA40', 'RAB24', 'OR1B1', 'LRRC47', 'QKI', 'ZNF768', 'POLR2D', 'RALBP1', 'ERLIN2', 'JADE1', 'CYGB', 'CAGE1', 'COL5A3', 'LGMN', 'KCNK7', 'SNORD36B', 'TRAPPC4', 'LINC01558', 'EVC', 'XRRA1', 'GTSF1L', 'PGA4', 'RBP2', 'GALR1', 'ST6GAL1', 'MRPS34', 'CCT6B', 'DPF2', 'NLE1', 'ARHGAP39', 'FECH', 'GTF3C3', 'FGF1', 'ITM2C', 'PNMAL1', 'TMEM30A', 'SENP8', 'ARHGEF15', 'CLDN20', 'KLF1', 'UQCR11', 'NPY1R', 'CACNA2D4', 'ZNF737', 'C16ORF70', 'EIF6', 'SELM', 'ARHGAP4', 'CHAC2', 'CCDC62', 'TANC2', 'NCOR1P1', 'CFAP47', 'LRRC75B', 'GFPT1', 'CABP5', 'CCL17', 'PCDHA13', 'HPSE', 'NDST2', 'RASSF3', 'PAPOLG', 'BEND7', 'HIST2H2BF', 'SSBP2', 'PDCL3', 'QSOX2', 'LOC400043', 'RBMY1J', 'AATK-AS1', 'GPR50', 'TMTC1', 'RBBP4', 'SDCBP', 'NXPE1', 'DMRTC1', 'LOC400927', 'GRIP1', 'PDGFC', 'ONECUT1', 'EXTL3', 'SNORD115-11', 'UBE2A', 'SOX10', 'OR10R2', 'BDP1', 'FDPS', 'ADCY5', 'TXNDC8', 'SHOC2', 'TIFA', 'COASY', 'TFEC', 'FBXO16', 'C1ORF106', 'ZNF568', 'TCEAL8', 'OVCA2', 'MSTO1', 'ICAM1', 'EPHA8', 'FANCA', 'SYT9', 'CAPN9', 'TSR3', 'MID1', 'UNC80', 'CMA1', 'MAGEE1', 'DNAH10', 'HIST1H3F', 'RNF141', 'CNOT1', 'GLIS3', 'FAM107B', 'TOP2A', 'MUT', 'LINC00284', 'MYEF2', 'MORN2', 'REXO4', 'OR8K1', 'TNRC6A', 'KRTAP5-9', 'H3F3B', 'PRCP', 'EME2', 'PPARD', 'ANKRD39', 'ARSA', 'LRRC17', 'SPAM1', 'PCMTD2', 'FRS2', 'LOC143666', 'GPATCH3', 'SNORD114-14', 'TXNRD1', 'ZNF131', 'PGRMC1', 'ZNF273', 'PRAMEF8', 'ZNRF2P1', 'DNAJC3', 'ZNF252P', 'LRRC28', 'ZNF674', 'SLC24A5', 'ZNF846', 'CERS5', 'WASF1', 'CLRN2', 'DUS4L', 'NTRK3', 'SNORD12', 'CLMN', 'ATP13A1', 'CACNG1', 'PLEK2', 'LINC00620', 'CPXCR1', 'FAM118A', 'PABPC4', 'CYB5A', 'ARL2', 'PIP4K2B', 'EDNRB', 'GPR157', 'OR4S1', 'ZNF823', 'S100P', 'FMR1-AS1', 'MSRB2', 'RHBDL3', 'APOH', 'CAMK4', 'SCARB2', 'C11ORF96', 'EIF2AK1', 'HRASLS', 'KDM2A', 'RECK', 'HOMER1', 'CNIH1', 'JRK', 'PPP5C', 'ZNF512B', 'HESX1', 'CCDC167', 'FAR2P1', 'LGALS13', 'ATP13A2', 'MTCH1', 'TMEM190', 'SAMD10', 'TMEM176A', 'TMEM39A', 'C6ORF1', 'PARG', 'ORC4', 'FRS3', 'FAM163B', 'HOGA1', 'WWC2-AS2', 'CYYR1', 'ADIRF', 'EMC7', 'CYP2C8', 'LOC644172', 'CATSPER1', 'SUPT20HL2', 'ETAA1', 'RPS19BP1', 'PMEL', 'TRAP1', 'TCAF2', 'PHF10', 'SORCS3', 'CMTM4', 'RNGTT', 'ID1', 'HNF1B', 'PPP1R9B', 'DNAJC30', 'CXCR2P1', 'ZNF526', 'DHX15', 'MS4A12', 'AMY2A', 'NUDT16P1', 'RNF187', 'MAP3K11', 'TMED9', 'SNORD52', 'ARHGAP29', 'LPAR1', 'RC3H2', 'MYOM1', 'OR51B5', 'WWP2', 'C2ORF73', 'SIPA1L3', 'CPSF4', 'RPL28', 'FDCSP', 'USP3', 'SPP2', 'FAM102A', 'FKBP9', 'PPAP2B', 'SP140L', 'EPC1', 'AP2M1', 'C11ORF53', 'HSPH1', 'FAM117A', 'DNAAF2', 'ITLN2', 'ARL5C', 'SNORD27', 'SPACA4', 'HAUS7', 'SNORA24', 'XKRX', 'POU2F1', 'CXORF56', 'TAB3', 'RFX7', 'UFD1L', 'TOR2A', 'FAM217B', 'ZNF221', 'MAS1L', 'LSMEM2', 'BRIX1', 'RPS27', 'SSTR4', 'PWP2', 'RAI2', 'GPR153', 'C11ORF1', 'AKIRIN2', 'ZNF518B', 'SNORD116-26', 'PAX8', 'TOP2B', 'ZNF773', 'FEM1C', 'TXN', 'C14ORF169', 'PALM2', 'HPR', 'PQLC3', 'KLF10', 'ALAS1', 'CSHL1', 'DKFZP779M0652', 'UCN3', 'LILRA2', 'PRKCSH', 'TP53RK', 'UPP2', 'EXOC5', 'SMIM1', 'RAP2A', 'OR13C8', 'FAM53B', 'EIF2B3', 'SUB1', 'SPATA33', 'PRKRA', 'FLJ41941', 'PWRN1', 'PCDHB19P', 'KRT75', 'PSG3', 'KDM5A', 'RNF168', 'FAM27L', 'E2F7', 'LOC100133050', 'WDR91', 'RCC1', 'DSCC1', 'OR52B4', 'PDLIM2', 'NEDD9', 'BTNL2', 'TRPV5', 'NKG7', 'DCK', 'CTHRC1', 'EIF3IP1', 'HOXA4', 'SAMD4A', 'POTEC', 'MGC16275', 'HPSE2', 'DEFB122', 'KATNAL2', 'KRTAP10-10', 'FOXB2', 'ISCA1P1', 'SUGT1', 'DHDDS', 'VAC14', 'MDFI', 'TAF1', 'RANBP6', 'SNORD63', 'CD93', 'RGS13', 'SLC35F4', 'SYT14', 'BGN', 'RSU1P2', 'ECE2', 'FGG', 'DACH2', 'CCDC57', 'ADA', 'GTSE1', 'MLF1', 'FBXL13', 'HACD3', 'SDHC', 'NOXO1', 'MAP3K10', 'MIOS', 'CHST2', 'SAMD4B', 'LGALS12', 'GXYLT2', 'TDRKH', 'HIST3H3', 'PRAMEF9', 'PRR7', 'GTF2B', 'TSKU', 'CLLU1OS', 'KLHL6', 'PATZ1', 'LINC00596', 'NR2F1-AS1', 'CTNNB1', 'ZNF707', 'HAGH', 'PLA2G2C', 'NOBOX', 'DDIT4', 'ABHD6', 'OR6C2', 'SP2', 'ICAM5', 'RABGEF1', 'HFE', 'NCAPD3', 'MVB12B', 'C5ORF60', 'WDR43', 'RAMP1', 'PRRT2', 'MBNL3', 'GATA6', 'OR6T1', 'MTM1', 'ARRDC2', 'NCKAP1', 'SHISA3', 'DUSP5P1', 'ARPP21', 'OXGR1', 'COX11', 'CLEC4D', 'STBD1', 'FAM183B', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 9.145652354552296e-15 NRMSE: 2.197945771341576e-15 MAPE: 1.8346564982032656e-11 Pearson Correlation: 0.11289711308532271 Spearman Correlation: 0.2270427312061248 Coefficient of Determination: -9.070508115113372 RMSE: 1.3703160777106713 NRMSE: 0.43485531788228965 MAPE: 1555.581860565626 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.553278387635146, tolerance: 0.01090027058925727 positive)
Pearson Correlation: 0.9998600136418249 Spearman Correlation: 0.9996396038998915 Coefficient of Determination: 0.9996950508329808 RMSE: 0.007860338108260092 NRMSE: 0.0018890502543283086 MAPE: 20.758134253332404 Pearson Correlation: 0.09487627409312846 Spearman Correlation: 0.1900896519906732 Coefficient of Determination: -5.775807812812052 RMSE: 1.124024043230806 NRMSE: 0.3566971449704258 MAPE: 1319.527093989508 Predictor: RandomForests Pearson Correlation: 0.6762274397244774 Spearman Correlation: 0.6131800477613936 Coefficient of Determination: 0.36807514968499444 RMSE: 0.35781638093161844 NRMSE: 0.08599288174275858 MAPE: 699.8184216008328 Pearson Correlation: 0.6390099708226034 Spearman Correlation: 0.5101135924388085 Coefficient of Determination: 0.30172448213090874 RMSE: 0.3608348445423183 NRMSE: 0.11450712253818172 MAPE: 179.35221524868456 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['STAG3L2', 'KRTAP5-9', 'SNORD115-22', 'GPR39', 'DLK1', 'COBLL1', 'SLCO4C1', 'ELF2', 'HSD17B10', 'SAT1', 'HBA1', 'DDX50', 'RAD54L', 'FGF2', 'FCRL1', 'BLNK', 'STK31', 'SP7', 'NBEAL1', 'LCOR', 'RAP2C', 'MSL3', 'NDUFA13', 'FHOD1', 'LOC284441', 'SMIM24', 'CCDC71L', 'FOXO4', 'SNORD116-11', 'AMER2', 'TTC27', 'SYNE3', 'CCDC115', 'GSTA5', 'CFHR5', 'LRWD1', 'MRPL52', 'FXYD2', 'AKTIP', 'EEF1A1P9', 'TMEM132E', 'SSR2', 'POU3F2', 'MBTPS2', 'SNRNP27', 'ZNF473', 'SLC4A10', 'MED4', 'CLINT1', 'LRRC18', 'PPARD', 'CRAT', 'ZCCHC14', 'DNAJC22', 'PRH2', 'SMARCAL1', 'ME3', 'PSMC1', 'CELF2', 'FAM135B', 'EGFL7', 'MTIF3', 'FAM65C', 'GBGT1', 'OR9Q1', 'PSMB10', 'TNFRSF1A', 'NYAP1', 'SLC2A4RG', 'IL25', 'TRIM42', 'SRSF4', 'UQCRH', 'FCER1G', 'CYB5B', 'ADCY10P1', 'SS18', 'C17ORF58', 'C16ORF87', 'OR13H1', 'STX4', 'CCT8', 'FAM83A-AS1', 'DEFB131', 'OR14I1', 'PACS2', 'ST6GAL1', 'ANKRD54', 'GDAP2', 'IKZF4', 'CD248', 'SUPT3H', 'TUBA4B', 'SNORA27', 'MYEOV2', 'TTI2', 'REEP1', 'NT5C3A', 'COX6A1', 'C12ORF50', 'TMEM55A', 'ATXN3L', 'DCAF12L2', 'SLC45A2', 'ZNF267', 'SNRK', 'GJA8', 'FAM57A', 'USH1G', 'MAZ', 'TRIM24', 'FGD2', 'STAMBP', 'VAMP4', 'PDE8A', 'SLC22A9', 'DHFR', 'ITPK1-AS1', 'ALX1', 'PSME4', 'USP32', 'TMEM40', 'USP17L9P', 'MYOF', 'TUBG1', 'JAGN1', 'ROPN1', 'CCDC163P', 'TBL1Y', 'KLRF1', 'DENND6A', 'DIAPH2', 'EED', 'ZNF575', 'GCLC', 'GLA', 'LSMEM2', 'KIR2DL4', 'LINC00895', 'ISL2', 'NUDT21', 'CHST14', 'PPFIA3', 'VAMP7', 'IDH3A', 'C9', 'PDE6A', 'SNORD115-25', 'DQX1', 'HNRNPU', 'KAAG1', 'UBA6', 'FOXRED2', 'PNN', 'BCAM', 'KLHDC2', 'PLEK', 'PIP4K2B', 'KCND3', 'SCARNA17', 'MMADHC', 'MT1X', 'KRTAP10-8', 'DUSP23', 'ZNF557', 'LILRA2', 'FOXD4L6', 'AMIGO1', 'ADRB3', 'PARD6G-AS1', 'TNFSF10', 'PKD2L1', 'ETFDH', 'PEX26', 'CORO1C', 'OSTF1', 'MANF', 'PALB2', 'BCDIN3D', 'AASDH', 'MAP3K14-AS1', 'GLOD5', 'SARDH', 'RHEB', 'IRX6', 'ZFYVE26', 'G2E3', 'LACRT', 'SPOP', 'TMEM261', 'KCNC4', 'LINC00235', 'TOR2A', 'ZNF483', 'PAX8-AS1', 'GNB1L', 'ZG16B', 'ZNF320', 'ADGRF1', 'CD52', 'CCM2', 'KIAA0125', 'MED11', 'CNN2', 'CST2', 'POGZ', 'GOLGA8DP', 'C18ORF42', 'RELB', 'FAM173B', 'SMPD1', 'LYST', 'ABCA11P', 'RHOC', 'C11ORF42', 'AACS', 'TMED6', 'FAM71C', 'OR2T33', 'EFNA1', 'HOXB7', 'MASTL', 'TRIML2', 'LINC00667', 'SYNJ2', 'SCGB1D1', 'RER1', 'SNORA5C', 'UNC79', 'MTFR1', 'LINC00847', 'PPP1R2P9', 'SNRNP200', 'SFXN2', 'PMPCB', 'PRDX4', 'FMO5', 'CABP5', 'RAX', 'STX12', 'LGR5', 'TECPR1', 'TGM2', 'VRK3', 'TSPAN16', 'UGT1A1', 'CBX8', 'TSNAX', 'RBP5', 'NUP153', 'OR5M8', 'GBA', 'RNF7', 'FZD10', 'C21ORF2', 'FAM183A', 'CTGF', 'LOC728554', 'HOXB8', 'GPR143', 'ELOVL1', 'LOC100129534', 'LCN10', 'NAT9', 'COX8A', 'LGI1', 'NCBP2-AS2', 'FBXO10', 'ZNF439', 'FRMPD4', 'STX16', 'MIS12', 'C4ORF17', 'MRPS23', 'RPL26', 'TTLL12', 'BAHD1', 'OR2T1', 'ZNF418', 'SNORD115-41', 'AGR2', 'TAS2R9', 'MZB1', 'GAPDH', 'CCNE1', 'RSRC2', 'EIF2AK1', 'MDM1', 'PRPF38B', 'RFNG', 'SNORD114-15', 'GADD45G', 'SEPHS1P1', 'PLEKHB1', 'SCN1B', 'STPG2', 'TTC12', 'PLD2', 'TCEANC', 'RIBC2', 'TPRX1', 'ATP2B4', 'STOX1', 'ZNF19', 'ULBP2', 'FCAMR', 'SLC10A5', 'TEPP', 'TEX29', 'SETD3', 'ZIM3', 'WDR38', 'RAPGEF2', 'LOC100134368', 'ESPL1', 'WDR24', 'PBX1', 'AGPAT6', 'ANKRD36BP1', 'HCRTR2', 'SIRPB1', 'LINC00964', 'CTSG', 'RPL13AP17', 'LINC00520', 'FAM13A-AS1', 'ELOVL5', 'ATP6V1B1', 'BMS1P4', 'FAM134B', 'ABCC9', 'TMEM143', 'APOC4', 'PEMT', 'OR5AU1', 'TMEM134', 'ETS2', 'ZCCHC16', 'SNORD95', 'PQLC2L', 'CCND3', 'HRASLS2', 'ATCAY', 'TLR8', 'ATP1B1', 'LOC652276', 'MED29', 'SFR1', 'LMOD2', 'GALNT1', 'ZNF766', 'PTPDC1', 'SEC11A', 'LOC644172', 'ZNF846', 'NHLH2', 'CCHCR1', 'C8ORF82', 'CRHR1', 'BPNT1', 'GCNT3', 'RNF128', 'SERPINA10', 'ZNF154', 'NKAIN4', 'MICALCL', 'SNORD58C', 'PDXP', 'SIDT1', 'HK2', 'CELA3B', 'NR2E3', 'RPL34-AS1', 'OR51F1', 'KCNIP4', 'RPS26P11', 'RAVER2', 'ZNF716', 'CD163L1', 'AGAP6', 'CTNND2', 'RHBG', 'SEMA5A', 'FRS3', 'TPGS1', 'DIRC2', 'SPDYE7P', 'SERTAD3', 'DMXL1', 'HTR2B', 'MLNR', 'TGFBI', 'TBX6', 'CHAC2', 'CRNKL1', 'NBPF15', 'SLC13A5', 'UNKL', 'SUPV3L1', 'FAM35BP', 'ANKRD20A4', 'C18ORF8', 'LPAR4', 'OAS2', 'CHST4', 'ATE1', 'DEFB124', 'PAXIP1-AS2', 'BLOC1S2', 'PSMG2', 'DNASE1L1', 'PRDM9', 'ZNF296', 'LINC00473', 'PPAT', 'FITM2', 'TM4SF18', 'DGKB', 'SERPINF1', 'MAOA', 'TESC', 'C10ORF113', 'ADGRD1', 'DYNLRB2', 'MRPL39', 'METTL2B', 'MYADML', 'IAH1', 'NGFRAP1', 'PLEKHG6', 'NKAIN2', 'RSL1D1', 'C11ORF70', 'ZMYM5', 'ZNF48', 'NPY4R', 'EOMES', 'NUPR1', 'HOXA11-AS', 'PPL', 'PTTG1IP', 'ALDH1A2', 'CLIP4', 'SHKBP1', 'DOT1L', 'ATP5G2', 'PPP1R11', 'SLC45A4', 'KRTAP5-1', 'FATE1', 'CCDC65', 'SNORD77', 'TFAM', 'ARL2BP', 'TRIM6-TRIM34', 'CT45A6', 'ADHFE1', 'CCDC183-AS1', 'OR1S1', 'ADAMTS18', 'ANKRD23', 'PAQR3', 'ZMYM2', 'OXA1L', 'SLC25A19', 'CD300E', 'HAUS7', 'ISX', 'ZHX3', 'GUCY2C', 'PCDHB10', 'SNORD8', 'SGTB', 'OR13C5', 'HBD', 'NRM', 'ARID4B', 'ZNF791', 'TYRO3', 'SPR', 'SRY', 'SLC37A3', 'SSX2', 'LRRC46', 'FAM189A1', 'RHD', 'ZNF226', 'PRR26', 'DIS3', 'CYBB', 'FEZF1', 'BMP3', 'RECQL4', 'AATK', 'ZNF484', 'PFDN4', 'WFDC10A', 'CNOT7', 'GTF3C5', 'KCND2', 'IPW', 'F2RL1', 'MLLT4-AS1', 'ERGIC2', 'MMRN2', 'TRIOBP', 'IMP4', 'IL1RL1', 'CPSF4L', 'SLC2A8', 'IGHMBP2', 'C11ORF95', 'ASCL2', 'KCNC3', 'OOEP', 'MMP19', 'ANKRD53', 'JMJD7-PLA2G4B', 'IGIP', 'AKAP6', 'EFCAB10', 'UBAP1', 'RTN4', 'TMEM194B', 'SNORA29', 'OR4F15', 'USP3', 'DNAH1', 'SMIM12', 'FAM47A', 'GPR34', 'SNORA48', 'AMMECR1', 'PTPRZ1', 'SLC4A2', 'H3F3C', 'PPIAL4G', 'SEL1L3', 'ABLIM1', 'ANTXR1', 'GOLGA2P5', 'SERPINH1', 'DIP2A', 'MRPS35', 'PPY', 'MGEA5', 'PRPH2', 'FAM58BP', 'EIF3F', 'TMEM52', 'CDK5RAP1', 'IHH', 'KLF7', 'CWC27', 'SMN2', 'SCEL', 'CSF2RA', 'FBXO38', 'ABTB2', 'CLEC18A', 'LRPAP1', 'NOP16', 'GHSR', 'SIPA1L3', 'CRTAP', 'THBS4', 'TBL1X', 'VWC2', 'FAM83D', 'SCUBE1', 'KLF1', 'SNRNP25', 'CIZ1', 'PRPF8', 'PAPOLB', 'PAPL', 'METTL3', 'ADORA2A-AS1', 'FAM99B', 'C1ORF174', 'CABLES1', 'POM121C', 'ZBED4', 'GPM6B', 'CT45A2', 'SLC27A1', 'ZUFSP', 'RANBP1', 'KCNJ9', 'OR4P4', 'FKBP11', 'HSD11B1', 'CGGBP1', 'PPP2R3B', 'EPHX2', 'C5ORF51', 'DTX2P1-UPK3BP1-PMS2P11', 'TPRG1', 'COX8C', 'CEP112', 'ADAMTS14', 'SPTB', 'SHOX', 'FUNDC1', 'GRAMD3', 'FAM214B', 'PAX2', 'BRMS1L', 'TMEM241', 'SLC24A5', 'MGMT', 'LIMS1', 'ZDHHC8', 'PITX1', 'PTPRM', 'RASA4CP', 'NTRK3', 'POLR2J3', 'JMJD4', 'AMER3', 'FAM66E', 'SOCS7', 'RALGAPB', 'SOGA1', 'TMED5', 'ZNF638', 'HS3ST5', 'BOLA2', 'LRRC69', 'NAPG', 'IFIT1', 'SLC4A7', 'MT1DP', 'OTOP3', 'ZNF124', 'TTC3', 'TFIP11', 'SSC4D', 'SPRN', 'CLDN7', 'EIF4EBP2', 'FBXL15', 'PDIA2', 'ZNF827', 'CHMP5', 'NME8', 'APLF', 'CYP39A1', 'MKS1', 'ADAMTS9', 'PCDH10', 'SSR1', 'KBTBD8', 'ZNF385D', 'MED13', 'GHRLOS', 'CFAP57', 'TTLL2', 'DAB2', 'SLC25A20', 'PPBP', 'CFAP70', 'MEIS3P1', 'ASPHD1', 'SNORD97', 'WNT10B', 'LOC644145', 'AIRE', 'TTC22', 'ASCL1', 'RAB27B', 'NMNAT1', 'CYP46A1', 'ZNRD1', 'SNORD18A', 'NCKAP1', 'CES1P1', 'ZNF564', 'PVRL1', 'RBM48', 'NUDT15', 'NOXO1', 'SPICE1', 'NEMF', 'IGFBP6', 'GRWD1', 'BMI1', 'RPL12', 'LIG1', 'HOXC4', 'LOXL2', 'MRPL50', 'NEFH', 'SCN4A', 'DDX23', 'FOXD4L5', 'CDH26', 'CHD1L', 'DIRAS1', 'NR1D1', 'MIR1-1HG', 'FAXDC2', 'ADAM21P1', 'ACRC', 'MTMR11', 'PUM2', 'TANGO6', 'HELT', 'KIAA1919', 'DCTPP1', 'PRTFDC1', 'C6ORF52', 'P2RX6', 'TDG', 'HAR1A', 'WHSC1L1', 'GEMIN8P4', 'GLIPR1L2', 'KRTAP4-9', 'ZNF586', 'TRMT2A', 'TSGA13', 'MYOT', 'RPS19BP1', 'TM7SF3', 'CCDC159', 'STAG3L1', 'ABCB1', 'MARK2', 'KRTAP5-AS1', 'ITGB5', 'BAALC', 'SLC39A3', 'ZGLP1', 'SNORD115-45', 'PRKAA1', 'CD8B', 'EXOC8', 'CA1', 'SNAR-D', 'OR51B6', 'LYPD3', 'OTOA', 'MYPOP', 'ZNF283', 'RBM24', 'RGS7BP', 'FLG', 'MEX3B', 'STRA6', 'MRPL32', 'TMEM184C', 'SLC27A4', 'CAND2', 'PCDH19', 'FGD5', 'ANKRD50', 'TNRC6A', 'TBC1D31', 'C17ORF64', 'RUNDC1', 'SNORA14A', 'TRAF1', 'STH', 'WIPF1', 'B9D2', 'KRT1', 'FGFBP2', 'LINC01089', 'TSPY4', 'IFT81', 'ARHGAP21', 'IQCF2', 'DCTN3', 'ST7', 'OR10A5', 'ERN2', 'OR4C16', 'TMEM223', 'COX19', 'SPEF1', 'NTPCR', 'PAPOLA', 'ASPH', 'APOOL', 'NUSAP1', 'LINC00928', 'DUSP6', 'EDDM3A', 'CABP1', 'WDR11', 'CRCT1', 'APOBEC1', 'MALAT1', 'NDN', 'DOC2B', 'LRRC41', 'KRTAP19-7', 'ACAP3', 'SLC22A7', 'MYH1', 'DYX1C1', 'RRAGA', 'FAM153B', 'FAM57B', 'MTTP', 'TSLP', 'MAPK10', 'ITGAV', 'SUMO2', 'KCTD7', 'LOC285768', 'STARD8', 'PTGER2', 'HTRA3', 'KIAA1328', 'H2AFZ', 'SLC14A1', 'BSCL2', 'FYTTD1', 'KIAA1033', 'NEDD4', 'NME1', 'CFL1', 'SUN5', 'GSG1', 'SIGLEC11', 'LINC00652', 'LARGE', 'AHNAK2', 'OSBP', 'RUNDC3B', 'NF2', 'LSM6', 'VAX2', 'S100A16', 'ATP6V0E2', 'FCGR2A', 'MATR3', 'CHID1', 'OR51B2', 'AKR7A2', 'ITGA6', 'ARID2', 'TMEM176A', 'SNAR-F', 'ASIC2', 'SPACA3', 'PKIA', 'GPR32', 'HSPA6', 'SPON1', 'TEX15', 'HIST1H1C', 'STRIP2', 'TAL2', 'RGCC', 'UCHL1', 'ABI2', 'ZBED2', 'RPL28', 'CRYGD', 'C5AR1', 'MED1', 'ACTA1', 'CRB2', 'HCRT', 'TMEM51', 'OR6N1', 'GABRG3', 'INTS4P2', 'ATP1B4', 'ACTR1B', 'LOC100272217', 'CLEC17A', 'ZNF322P1', 'SUGT1P3', 'LPCAT2', 'KIAA0355', 'TGS1', 'FIP1L1', 'NUP205', 'MRPL44', 'OR51A4', 'TMEM190', 'GNG13', 'TSPAN12', 'TRIP11', 'VWA5B2', 'CDKL1', 'OR2A14', 'WTH3DI', 'ARMCX5', 'LARP1B', 'MOSPD2', 'HYALP1', 'FREM2', 'OXT', 'C15ORF39', 'BMPR1B', 'FSTL1', 'RBMX2', 'C15ORF56', 'HSD11B1L', 'CELSR2', 'LMNB1', 'LRR1', 'PRDM15', 'SPACA7', 'UMPS', 'GXYLT2', 'MYO3B', 'SMURF1', 'GATM', 'CGB1', 'FAM63A', 'ATP6V1A', 'HSD17B1', 'KIF4A', 'ZNF274', 'DEXI', 'TSPAN32', 'STAT3', 'FER1L5', 'NKD2', 'ZSWIM2', 'DNAJC4', 'GTF2IRD2B', 'GTF2H2C', 'C1ORF105', 'TRIP13', 'NUP98', 'SYT2', 'GRIN2C', 'PRKCI', 'MMD2', 'C11ORF88', 'HPVC1', 'CDX4', 'RPGRIP1', 'ST8SIA1', 'FCRLA', 'RBFA', 'VAT1', 'TBX18', 'KLHL22', 'C17ORF104', 'ZNF788', 'FAM21C', 'ADORA3', 'ARRB2', 'UBAP2', 'OLIG3', 'RSU1P2', 'TRIM64', 'RPIA', 'ITGA9', 'CANX', 'TAC1', 'SPRR1A', 'EPC2', 'GRIK1', 'ELMOD1', 'STT3B', 'GRAMD1B', 'LPCAT1', 'GYPA', 'KIAA0753', 'AMFR', 'RNY4', 'EEF1B2', 'COA1', 'CERK', 'NXF3', 'LINC00488', 'SLC16A6', 'DRAM2', 'MINA', 'FAM138D', 'SLX1B', 'SFTPD', 'FDX1', 'PSMG1', 'SLC22A4', 'PLA2G7', 'PDLIM3', 'IFT22', 'SYS1', 'TNFAIP6', 'KLRB1', 'FAM66A', 'RABEP2', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 1.4808081796898622e-14 NRMSE: 3.576485797724525e-15 MAPE: 1.563866485551485e-11 Pearson Correlation: 0.06891116707469175 Spearman Correlation: 0.10618835646329756 Coefficient of Determination: -5.566682375472549 RMSE: 2.0563322881865593 NRMSE: 0.4323295534830038 MAPE: 1659.3192298855183 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 1.2677824454655815, tolerance: 0.02722969373777278 positive)
Pearson Correlation: 0.9999107245405672 Spearman Correlation: 0.999833567005465 Coefficient of Determination: 0.9998020453495707 RMSE: 0.010009516387490635 NRMSE: 0.0024175240043209922 MAPE: 10.720201149417463 Pearson Correlation: 0.03639494404764283 Spearman Correlation: 0.059489519819449124 Coefficient of Determination: -12.598656151934124 RMSE: 2.9591588966370646 NRMSE: 0.622142565099038 MAPE: 2135.635015206319 Predictor: RandomForests Pearson Correlation: 0.6136975580403391 Spearman Correlation: 0.5939327958633541 Coefficient of Determination: 0.28588211524905394 RMSE: 0.6011947722424429 NRMSE: 0.14520209937263137 MAPE: 516.6639382791461 Pearson Correlation: 0.31182013607774905 Spearman Correlation: 0.2694921383059639 Coefficient of Determination: -0.0009462409109486369 RMSE: 0.8028338326933525 NRMSE: 0.1687902263672846 MAPE: 655.143796090379 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['HCST', 'RITA1', 'RBM15B', 'PGA3', 'PBLD', 'KRTAP9-2', 'CYB5R3', 'FAM66A', 'OR4C12', 'DTX1', 'CYB5R4', 'CCL24', 'HOXC5', 'CERS1', 'MAPRE2', 'GATS', 'ATG4B', 'SPACA6P', 'ARSH', 'GNG4', 'OSGEP', 'UXT', 'USH1G', 'NALCN', 'MAP3K10', 'SBSN', 'ZNF202', 'SUPT20HL1', 'IL4I1', 'LOC93622', 'LEO1', 'PDS5B', 'RNF217', 'ZNF2', 'FGGY', 'SNORD62A', 'SERPINA13P', 'PNPLA6', 'FERMT2', 'FAM132A', 'RAI2', 'GADL1', 'VSTM4', 'EIF5A', 'LRRN4', 'NEDD1', 'ANKIB1', 'PLOD1', 'PDZD3', 'FOLH1', 'HTRA1', 'NTN3', 'C9ORF129', 'MYCNOS', 'FCRL6', 'HOXA6', 'C10ORF91', 'SLC8A2', 'ADCK3', 'KCNJ5', 'GALNT3', 'LINC01020', 'C5ORF60', 'RBM20', 'ZCCHC14', 'TTC13', 'FBXO27', 'LINC00592', 'LINC01300', 'OR51L1', 'SMIM6', 'FMN1', 'HSDL1', 'PHC2', 'SLC16A12', 'PAXBP1', 'TMEM44', 'CLPTM1', 'HMGB2', 'AGR3', 'DLK2', 'CCDC178', 'ADGRE3', 'TMEM110', 'TMCO5A', 'FAHD1', 'KCNQ4', 'EIF4E2', 'VARS', 'BMP8A', 'GALR1', 'ZNF645', 'NRG3', 'L2HGDH', 'PLA2G2D', 'LRP5L', 'ZNFX1', 'ICAM3', 'PDZD2', 'GALNTL5', 'TMED8', 'DCAF6', 'DEFB119', 'NUDT3', 'CALM3', 'FBXO18', 'CASC4', 'FAM58BP', 'DPCD', 'IFNL3', 'PUS7', 'SLC38A9', 'TRIM25', 'LRRC37A', 'QRFPR', 'ZNF70', 'JUNB', 'CCDC77', 'AMPD3', 'ORMDL3', 'NOXA1', 'AKAP12', 'PKN2', 'C9ORF89', 'ZNF398', 'NHLRC1', 'OR6C68', 'GLTSCR1L', 'C1ORF112', 'LOC728613', 'BAZ2B', 'SKA3', 'SUCNR1', 'SEPHS2', 'AOAH', 'NPAS1', 'INSRR', 'SDC1', 'MAGEB16', 'MEF2BNB-MEF2B', 'CLPS', 'TRIM35', 'GDAP1L1', 'GRAMD3', 'DDX28', 'TMEM56', 'NKAIN1', 'DMRTC1B', 'BRINP1', 'SP110', 'C19ORF45', 'C19ORF38', 'MS4A14', 'VPS37B', 'IL17D', 'KCNV2', 'CROCCP3', 'MUC6', 'FBXL16', 'HPVC1', 'FAM197Y2', 'ATP5G3', 'EXOC2', 'MOCOS', 'LCN9', 'HSP90AB1', 'PPIAL4E', 'TRIM36', 'KLF17', 'SNORD115-31', 'GOLGA2P5', 'HSPA1L', 'SFXN5', 'RANBP3L', 'LINC00114', 'GULP1', 'CD180', 'LCE1A', 'PDX1', 'RNFT2', 'SGOL1', 'DEGS1', 'CRTC3', 'PRDX2', 'PNPLA3', 'RPS6KB1', 'P2RX1', 'MANBA', 'HIST1H1E', 'FAM181A-AS1', 'PLEK', 'LYPLA1', 'RAB19', 'ZNF675', 'SNAP23', 'HHLA2', 'POLR2A', 'SKINTL', 'LGALS9', 'PRDX6', 'NOTCH1', 'LARP1B', 'ZIK1', 'TRIM34', 'IPO5', 'OR51B4', 'FAM188A', 'UBXN11', 'ID2B', 'GSTM2P1', 'ZNF74', 'OR52J3', 'SCARNA12', 'ZNF75A', 'C9ORF156', 'DBF4', 'PPIL2', 'LASP1', 'ST13', 'FMR1NB', 'MEOX2', 'DMXL2', 'RNASE1', 'UBE2D2', 'MSH4', 'FYN', 'CEACAM7', 'KIF25', 'ORAI1', 'HCG4B', 'IGFL1', 'OR13A1', 'TMEM125', 'USHBP1', 'SSR2', 'ZNF429', 'C3ORF17', 'VWC2L', 'CWC25', 'PCNAP1', 'RDH14', 'FAM71D', 'TYMSOS', 'COLQ', 'SUSD2', 'NSMCE2', 'LOC100268168', 'LAMA1', 'ACSF3', 'C4ORF45', 'PSMB8', 'ZNF688', 'TRIM9', 'COBLL1', 'ATP8A1', 'KRT27', 'RNASE2', 'TIMP2', 'ZFP36', 'LMBRD1', 'CD63', 'TTTY9B', 'OSBPL1A', 'KRT78', 'SCIMP', 'BRK1', 'MTHFD1L', 'SUN2', 'CAPZA3', 'APOF', 'ST5', 'TSPY4', 'CHRAC1', 'SERPINB7', 'SERPINA9', 'AWAT1', 'PYCR2', 'GPR161', 'DCDC1', 'ABCC6P2', 'ACACA', 'TAAR2', 'CCBL1', 'BAHCC1', 'FOXP4', 'PCDHB15', 'USH2A', 'PNCK', 'FJX1', 'CYP3A4', 'CD99', 'ECH1', 'MEGF9', 'MFRP', 'TXNRD1', 'CDC26', 'NPY6R', 'MRPL37', 'GTF2F1', 'ADGRB3', 'FBXO34', 'SP7', 'NEFH', 'VASP', 'NUTM2A-AS1', 'POU4F2', 'PIGL', 'SLC25A12', 'ZBTB38', 'CLEC18C', 'ESYT2', 'VPS4A', 'ACTN2', 'COLGALT1', 'SPATA24', 'UBQLN1', 'FOXA3', 'ABL2', 'SYT12', 'TGM7', 'LIMCH1', 'SLC16A1', 'SNORD33', 'GUCY1A3', 'GSTA5', 'PCF11', 'JAM3', 'C1QTNF9B-AS1', 'WDR33', 'MAFG', 'RNF19A', 'SPCS3', 'SMCP', 'CYTIP', 'MTMR10', 'RNPEPL1', 'MFSD9', 'SPERT', 'MYBPHL', 'NOA1', 'SUPT16H', 'BPTF', 'MYO1C', 'PTCHD3P1', 'CKAP2', 'OXR1', 'ANP32AP1', 'SPDYE1', 'MMP16', 'ATG16L1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.9588131711611212 Spearman Correlation: 0.8544017507694274 Coefficient of Determination: 0.9193226971920451 RMSE: 0.14338336569216711 NRMSE: 0.034602738058297444 MAPE: 31.515837710878476 Pearson Correlation: 0.42308147812667846 Spearman Correlation: 0.3569795134602677 Coefficient of Determination: -0.4315130825468658 RMSE: 0.5409095841511616 NRMSE: 0.2207253669106185 MAPE: 151.8184035946869 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.04435849881525833, tolerance: 0.013709715616187399 positive)
Pearson Correlation: 0.9514900570514312 Spearman Correlation: 0.8392592967338484 Coefficient of Determination: 0.9052717577039743 RMSE: 0.15536844700670474 NRMSE: 0.037495100274321194 MAPE: 34.53848851597013 Pearson Correlation: 0.4763469716355504 Spearman Correlation: 0.40668088130774704 Coefficient of Determination: -0.2118378238488201 RMSE: 0.4976789449809218 NRMSE: 0.2030845282710038 MAPE: 133.15706577839725 Predictor: RandomForests Pearson Correlation: 0.8588677325611868 Spearman Correlation: 0.7168310122462735 Coefficient of Determination: 0.7322880818785162 RMSE: 0.26119023620538684 NRMSE: 0.06303309510953661 MAPE: 55.0739358313589 Pearson Correlation: 0.8403905968148044 Spearman Correlation: 0.7084689292951976 Coefficient of Determination: 0.6962619460571505 RMSE: 0.24915902282331465 NRMSE: 0.10167266090888545 MAPE: 71.18837917315965 Protein: CCND1 x_train_column_count: 859 x_train columns: ['PHOX2B', 'ITIH2', 'C12ORF76', 'C14ORF80', 'HS2ST1', 'GUF1', 'HIST2H2BA', 'CEL', 'SLC25A5-AS1', 'PIK3CD-AS1', 'DAB1', 'ZFYVE9', 'DKC1', 'LIX1L', 'CA5BP1', 'F2RL1', 'WDR33', 'BRD7', 'PSMA2', 'CUZD1', 'CCL18', 'NOL4', 'OR8G2', 'MIB2', 'NLGN4X', 'TAF6L', 'GDI2', 'C19ORF45', 'RSAD1', 'RWDD3', 'SLC7A11', 'RPRML', 'GABRP', 'OR10J3', 'CDS1', 'IRF2BP2', 'EXOC7', 'CST2', 'ABHD11', 'PGK1', 'WBP5', 'STK19', 'SAT2', 'CSNK1A1P1', 'DUSP23', 'MLLT6', 'IGSF22', 'FBXL20', 'ZWILCH', 'OIT3', 'CCDC176', 'CST5', 'BCYRN1', 'SCGB2A1', 'PRDX2', 'MBD3L1', 'ZNF543', 'NEGR1', 'CYP4F3', 'GEMIN6', 'VGLL1', 'H1FNT', 'TAP2', 'LRRFIP1', 'SHCBP1', 'LOC401127', 'CCDC107', 'SNORD114-16', 'PLB1', 'SEC61G', 'ROPN1', 'DEFA1B', 'PCDH7', 'TRIM78P', 'PPP3CB', 'POTEF', 'XYLB', 'TPD52', 'HSD17B4', 'THBS2', 'CHPF', 'PCDHGA1', 'CFAP57', 'NUB1', 'TTC28-AS1', 'METTL13', 'COX7B2', 'PBLD', 'HTR7P1', 'SYTL5', 'SEC22A', 'CRYGA', 'RASSF1', 'ATP1A1-AS1', 'MTHFD1L', 'BBOX1', 'TRAPPC5', 'ZBTB5', 'INS-IGF2', 'GRIA1', 'OR5B2', 'DNAH3', 'C9ORF50', 'CLK4', 'DOCK11', 'SNORA28', 'SNORD66', 'VBP1', 'DFNB59', 'GOLGA3', 'PSMD9', 'SEH1L', 'C7ORF50', 'TNS4', 'ERCC1', 'DGKI', 'ZNF385A', 'LRRC25', 'PABPC4', 'RAP2C', 'MIER2', 'STK26', 'PFKFB3', 'PCDH11Y', 'RBP1', 'FAM182A', 'AP1S3', 'EDRF1', 'TSPAN33', 'HCCS', 'STX3', 'THAP10', 'RNF114', 'CAP1', 'EPS8', 'OS9', 'ZNF674', 'GPX8', 'GRB2', 'TMPRSS2', 'C1ORF204', 'ZDHHC17', 'TCF7', 'PVRL2', 'COG1', 'OTOP2', 'HES2', 'TTC9C', 'ZNF263', 'SUOX', 'KRT9', 'ZNF717', 'TONSL', 'THUMPD2', 'LINC00982', 'ZNF24', 'ZMYND10', 'LIPG', 'EXTL2', 'GID8', 'CHRNA4', 'MKNK1', 'GNG12', 'RDH10', 'ZNF750', 'PIK3C2G', 'SEPT1', 'P4HTM', 'PTPRR', 'GAK', 'UBE2MP1', 'ITGB4', 'C20ORF194', 'ZNF593', 'SRCAP', 'TMEM230', 'FES', 'MAPKAPK5', 'AQP3', 'RAD1', 'OCA2', 'CD40', 'ERBB2IP', 'RALGDS', 'CLTA', 'C1QL1', 'SPOCK1', 'RAD51B', 'GATM', 'RBPMS2', 'ZNF767P', 'VDR', 'PHKB', 'FIZ1', 'NXF1', 'VIT', 'SRP72', 'ARHGEF1', 'OAZ3', 'FAM83A', 'CPNE5', 'CIDECP', 'ESF1', 'MT4', 'SOX15', 'CHIC1', 'KIAA1755', 'HIST1H4C', 'IL4R', 'SERPINE2', 'FAM208B', 'NBPF22P', 'FAM96A', 'SNORD126', 'SWI5', 'TSIX', 'OR56A3', 'ZNF714', 'OSGEP', 'F2R', 'NAA15', 'ARHGEF3', 'PRMT9', 'NACC2', 'IWS1', 'IL12B', 'UBXN10', 'PAPOLB', 'PSMD12', 'FUBP3', 'TMEM182', 'NANOS3', 'HBG2', 'RPL6', 'SEMA3D', 'CCNB1IP1', 'SNORD86', 'DCUN1D4', 'SERPINB6', 'LRRC70', 'PTPRS', 'NAA30', 'WNT8A', 'CDK16', 'MTMR4', 'TEX13B', 'CCDC65', 'MAP1B', 'DHRS7', 'CYP17A1', 'TRIM9', 'SMG8', 'TADA2A', 'NUDT13', 'ALG3', 'CDC45', 'CC2D1B', 'C4ORF45', 'INPP5D', 'MED13', 'RGS9', 'IFNLR1', 'OR2C3', 'BRDTP1', 'KIF18A', 'PTGES3', 'STC1', 'CDC42SE2', 'ULK4P3', 'MAZ', 'AGMAT', 'BPIFC', 'SMARCA1', 'TOE1', 'GCAT', 'CXADRP2', 'LHX2', 'ROBO3', 'KRTAP12-1', 'FLYWCH2', 'C1QL3', 'SNORD81', 'LIN7A', 'KCNK12', 'OR2L2', 'SMAD9', 'AKAP10', 'ATP5L', 'SERPINB2', 'C1ORF110', 'RCVRN', 'CSGALNACT2', 'FOXR1', 'RABL2A', 'C21ORF62-AS1', 'ZNF331', 'DPY19L2', 'PFN1P2', 'TFAMP1', 'OR10R2', 'LYZL6', 'EDDM3B', 'PMS2P3', 'GFI1', 'RNASEH2B', 'SLC7A7', 'SKINTL', 'ZNF333', 'SPTSSB', 'MUC16', 'RAB39B', 'APOLD1', 'MIR1-1HG', 'OR10P1', 'MX2', 'GPR176', 'ZNF786', 'CLCN1', 'IGFLR1', 'ZBTB20', 'LEO1', 'OR5M9', 'STAC3', 'TMEM120B', 'CX3CR1', 'C11ORF74', 'SMIM20', 'WDR64', 'ANKRD28', 'CCDC7', 'ARID1A', 'NR1H2', 'BCAS4', 'PGC', 'RCN3', 'KDR', 'TMED1', 'DGCR2', 'RUVBL1', 'PGK2', 'LINC00152', 'CACNG5', 'GTF2A2', 'FTMT', 'ZACN', 'C1GALT1C1', 'PAX8-AS1', 'OSCP1', 'TPRA1', 'ARL15', 'AGR3', 'SNORD114-30', 'FCGR2C', 'ZBP1', 'ANXA2P2', 'HDC', 'CNPY4', 'ARL4D', 'CCDC183-AS1', 'TMEM8A', 'EVI5L', 'LOC613037', 'KRIT1', 'GDNF', 'KPRP', 'CLDN2', 'AGBL4', 'C10ORF67', 'SNORD111B', 'P2RY2', 'ZNF426', 'GYPA', 'GCSAM', 'SETD6', 'CLU', 'AMPH', 'TBC1D5', 'TMEM256', 'METTL18', 'TAS2R13', 'EXOSC7', 'TACC2', 'LIMS2', 'GAGE8', 'IER5', 'SP1', 'ADORA2B', 'SNORD85', 'SUGP1', 'PRAMEF20', 'SCGB3A2', 'LHFPL3-AS2', 'MMP15', 'KRTAP20-4', 'DCDC2B', 'HAL', 'FAM63A', 'XIAP', 'KLHL34', 'EPS8L3', 'RGS20', 'ZNF789', 'TNFRSF4', 'PDE1B', 'HEATR1', 'GREB1L', 'TMIGD2', 'HADHA', 'ZNF572', 'PSMA1', 'LGALS9C', 'SYT5', 'CRIP2', 'SS18L2', 'FAM66D', 'SCARNA8', 'LBX2', 'CALR', 'SRSF11', 'BIN3-IT1', 'LIPF', 'OPN1MW', 'RCAN1', 'RAB5C', 'JAM3', 'YEATS2', 'DNAJA1', 'TREX1', 'SPATA31A5', 'MRPS33', 'DHRS9', 'ATRIP', 'RAD9A', 'YY2', 'C15ORF62', 'PEX16', 'KCNAB2', 'UBA6', 'FAM175B', 'RPP14', 'TCAF1', 'FAM131B', 'PRELID1', 'CATSPERG', 'SPAG8', 'ZNF645', 'GSTO1', 'PRKCE', 'EPHB3', 'SNORA53', 'MATR3', 'SELM', 'SNORD115-44', 'TBX15', 'XPO5', 'CYP1A1', 'NGRN', 'CLN6', 'ARFIP2', 'HSPA1B', 'IDS', 'APOC1P1', 'AP3D1', 'EIF2S2', 'ERMARD', 'OR6K2', 'ILF3', 'RPRM', 'TMEM98', 'ZNF292', 'RITA1', 'OTOR', 'OR10H2', 'SLC25A28', 'MSTO2P', 'ARL14', 'ANKRD35', 'PTTG2', 'PPIL6', 'SNORD116-11', 'RERGL', 'ADCY2', 'UBE2D1', 'DIAPH2', 'MDFIC', 'KRT73', 'PILRB', 'SLC22A25', 'PRCD', 'EPHX3', 'MAN1C1', 'CYSLTR2', 'FAM184A', 'CPTP', 'OR4N5', 'KNG1', 'CSTA', 'OR4C6', 'CLEC2L', 'ELMOD1', 'ARPC2', 'G3BP1', 'ISY1', 'TSNAXIP1', 'PPP3CA', 'ARMCX1', 'TOP1P1', 'FCRLA', 'PCDHB7', 'CAMSAP3', 'SAP30BP', 'SPRR2C', 'CDNF', 'FPR3', 'IKZF2', 'CEP83-AS1', 'PEX11A', 'NRM', 'LINC00910', 'CP', 'CHRNA1', 'FRYL', 'RAB35', 'ANKRD22', 'TNXB', 'STIM2', 'OR2C1', 'CLIC5', 'MAP4K3', 'RAN', 'TSSK1B', 'ADAMTSL5', 'POLR2I', 'PPAPDC1B', 'SLCO2A1', 'GPR68', 'PPP1R26', 'SPEN', 'GTDC1', 'LRRC45', 'DEFB132', 'MAPK10', 'RNFT2', 'RAP1GAP2', 'PALMD', 'CLPS', 'PPP1R14A', 'POSTN', 'NEMF', 'KRT82', 'ELOF1', 'CDC6', 'SNORA30', 'NPS', 'CCDC36', 'HIST1H4L', 'C10ORF131', 'GSE1', 'MEFV', 'CREBZF', 'PCDHB8', 'IL2RA', 'ITGA9', 'SEMA5B', 'GDF2', 'HPDL', 'PIM2', 'GNA11', 'LSM3', 'UGGT2', 'AURKB', 'ZNF436', 'ID2B', 'ZKSCAN1', 'RFX5', 'PRSS57', 'WEE2-AS1', 'WBP1L', 'SRSF1', 'SNORD115-45', 'CKMT2', 'RBM26', 'BDKRB2', 'CDKL1', 'TP53I13', 'TNFRSF13C', 'TECTB', 'TTLL5', 'ABHD17C', 'TCAF2', 'ZNF577', 'PRCP', 'NACAP1', 'IDH1', 'RPL21', 'HAND2', 'PCSK6', 'FBXL8', 'NRADDP', 'CD274', 'B4GALNT2', 'PEG10', 'LSM6', 'CDC37', 'ZW10', 'CRCP', 'SLC17A4', 'DGKA', 'LRRC6', 'FAF1', 'HRNR', 'EMC6', 'STYXL1', 'G6PC3', 'EFHD1', 'PDGFA', 'LOC344967', 'SYNJ2', 'MTX2', 'CSTF2T', 'COL21A1', 'CD3EAP', 'FAIM2', 'IFNK', 'GRM6', 'ATP1A4', 'PTRH1', 'LRRC47', 'CIAO1', 'RTN3', 'ZFYVE28', 'ANKRA2', 'ODAM', 'MAB21L2', 'MAATS1', 'PABPC5', 'RPS7', 'COQ9', 'DERL2', 'CENPK', 'EIF5B', 'BPIFB3', 'TNFRSF13B', 'KHDC3L', 'C4ORF17', 'ARNTL2', 'ZUFSP', 'EPB41L4B', 'PRR14', 'TSR1', 'NCR2', 'MRGBP', 'IRGC', 'PSMA6', 'SH3RF1', 'CA9', 'EPHA3', 'ST13', 'GCNT1', 'SPACA6P', 'FBLN1', 'POLR3H', 'UGT2A3', 'IFNB1', 'TUBB2A', 'SUSD5', 'TSEN54', 'GCLC', 'RNMT', 'MESDC1', 'NICN1', 'GCA', 'GALP', 'RNF150', 'PECR', 'GOLGA8A', 'LINC00242', 'VEGFC', 'TSPAN3', 'MGC72080', 'SNORA31', 'ZNF221', 'DNAJB11', 'SNORD17', 'PACSIN1', 'ARHGAP18', 'SNORD115-32', 'RASGEF1A', 'OGFOD1', 'BTBD17', 'PYCR1', 'HLA-DRB1', 'SPRY2', 'LOC389705', 'RAB38', 'DBF4', 'ATP5O', 'CLEC11A', 'EVL', 'ALDOB', 'SNRPE', 'HOXC12', 'SPRR3', 'PATE4', 'KLC3', 'BCL10', 'TBC1D25', 'IL9', 'PFDN2', 'TNMD', 'LGALS14', 'UBQLNL', 'ZSCAN10', 'CT45A2', 'MGST3', 'SEPT10', 'FCGR1A', 'POM121L2', 'LOC389332', 'ETAA1', 'C9', 'ADGRE4P', 'C1QTNF2', 'KRT6A', 'SLC25A23', 'SH2D4B', 'MAN2B2', 'GRIA3', 'TSHR', 'MAT2B', 'ELOVL2', 'SYCP3', 'PTPRO', 'ADRM1', 'WDR47', 'MAP3K4', 'ZNF585B', 'POU6F2', 'MRPL55', 'C3', 'ZNF800', 'BCLAF1', 'FAM217B', 'DDAH2', 'BIVM', 'C4ORF48', 'KRT31', 'GPN2', 'IRF9', 'FAM195B', 'IRF7', 'LRRC71', 'RPP25L', 'SPRR2F', 'DNMT1', 'AFG3L1P', 'HS3ST5', 'FAM150A', 'C8ORF86', 'RSPO4', 'PPP1R3F', 'ZNF253', 'SIRPA', 'RALGAPB', 'IFITM2', 'SOCS1', 'LIMD1', 'NFS1', 'LOC284023', 'AMPD2', 'COA3', 'HSPA12B', 'YBX1', 'DDX27', 'NMB', 'MED6', 'SEMA3F', 'PABPC3', 'PRKAB2', 'C1ORF226', 'BCL11B', 'TSPYL4', 'NDUFA7', 'GABPA', 'C19ORF12', 'SDC4P', 'ICE1', 'CWC27', 'SNORD27', 'DIP2B', 'CAPZB', 'GPD1L', 'MEG8', 'PAPLN', 'RHPN2', 'NR0B1', 'L3HYPDH', 'PLAT', 'B3GNT9', 'MSX1', 'PDK3', 'MCM2', 'SPTBN4', 'COL7A1', 'KIAA1257', 'SIRT2', 'PGAP2', 'CD33', 'MS4A13', 'SLC25A20', 'LRRK2', 'CARTPT', 'IL6ST', 'CCDC64', 'ATP6V1G1', 'KBTBD7', 'KCNC1', 'FBF1', 'FAM150B', 'FAHD2CP', 'PCNA', 'C12ORF73', 'SNORD38B', 'EPS15L1', 'EBPL', 'UFC1', 'YEATS4', 'STH', 'BOC', 'PDC', 'C3ORF38', 'ZNF814', 'LOC145474', 'HMP19', 'INMT', 'PWAR1', 'SCARB2', 'NLRP4', 'SNORA71B', 'UBN2', 'DHX37', 'MED17', 'NAIP', 'HAND1', 'TRAP1', 'NRIP2', 'IGF1R', 'PLBD1', 'TUBBP5', 'HDAC5', 'PSMD14', 'ZNF835', 'SEPT7P9', 'PCGF2', 'FHOD3', 'MUTYH', 'ERBB4', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 6.6419442321756295e-15 NRMSE: 4.243457298127822e-15 MAPE: 2.9204115573146283e-11 Pearson Correlation: 0.1743563521165062 Spearman Correlation: 0.11384431227322038 Coefficient of Determination: -12.553971537285301 RMSE: 0.8430867766202812 NRMSE: 0.5317146673942238 MAPE: 1787.0284716022677 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.38741422361636424, tolerance: 0.003106817057166876 positive)
Pearson Correlation: 0.999032393251466 Spearman Correlation: 0.9986906526927947 Coefficient of Determination: 0.9979417832114101 RMSE: 0.010902152703541602 NRMSE: 0.006965252618508325 MAPE: 34.51103372230798 Pearson Correlation: 0.19443925889722738 Spearman Correlation: 0.12642801032431827 Coefficient of Determination: -8.99408604934607 RMSE: 0.7239532718657238 NRMSE: 0.4565800150515413 MAPE: 1400.707594733028 Predictor: RandomForests Pearson Correlation: 0.5854308228914306 Spearman Correlation: 0.549164234389582 Coefficient of Determination: 0.27527353334052895 RMSE: 0.20457556699084783 NRMSE: 0.1307008388538658 MAPE: 490.56990994954407 Pearson Correlation: 0.498308975837521 Spearman Correlation: 0.4550156485741717 Coefficient of Determination: 0.20559968044288934 RMSE: 0.204107375363857 NRMSE: 0.12872564036570194 MAPE: 501.50046906279056 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['CRABP1', 'C3AR1', 'MED30', 'ZNF804B', 'BEAN1', 'GDF6', 'CELSR2', 'CPLX3', 'GPR4', 'C16ORF54', 'CLP1', 'LINC01555', 'OR51E2', 'SRSF12', 'CACTIN', 'FANCM', 'CHTOP', 'PFN4', 'LYZL4', 'SLC13A5', 'SMNDC1', 'NETO1', 'LINC00643', 'MORF4L1', 'CDC37L1', 'ZFYVE21', 'C14ORF166', 'CAPN10', 'GPA33', 'ELOVL2', 'FLJ16779', 'GRIK2', 'CLGN', 'AJUBA', 'EMC6', 'KRTAP13-1', 'EPC2', 'ARHGAP30', 'KRAS', 'TMCO5A', 'ABCC6P2', 'DEPDC5', 'ENSA', 'SAR1B', 'C7ORF43', 'ANAPC16', 'ARCN1', 'OR13A1', 'HBA2', 'ALCAM', 'CYMP', 'AP2S1', 'HOXD12', 'SREK1IP1', 'CLPP', 'CLIP2', 'EXOC3-AS1', 'XIST', 'UBQLN4', 'RHBDF2', 'DPP10', 'DCDC1', 'KRTAP1-3', 'TNFSF14', 'RPS6KA3', 'USP12', 'RRBP1', 'AKT3', 'ARAP3', 'NCKIPSD', 'TNFRSF6B', 'MLYCD', 'PARPBP', 'MED12', 'TMSB4Y', 'HRSP12', 'SLC4A1AP', 'TLX1', 'EGF', 'DTNBP1', 'FAM214B', 'TUBA1C', 'KPNA7', 'SNX2', 'MAGEA1', 'ZSCAN32', 'LOC340017', 'BMP7', 'GPI', 'SNCG', 'METRN', 'VPS29', 'BMP5', 'KIAA1875', 'GFM2', 'RHBDF1', 'RPS5', 'KCNJ14', 'ZMYM5', 'ZNF587', 'AFF1', 'ZNF408', 'RBP1', 'ARX', 'TPTEP1', 'CROCCP2', 'IFRD1', 'C12ORF77', 'RASSF8', 'FARS2', 'EPOR', 'ZFP14', 'CSN2', 'CDRT1', 'SDHAP3', 'CYP2D6', 'CEBPA-AS1', 'OR11L1', 'NRP2', 'LOC100132215', 'ZC3H11A', 'MAP3K19', 'CASP6', 'SNORA49', 'MGMT', 'ATP5J2', 'LOC90784', 'ZNF395', 'ZDHHC17', 'HCFC2', 'CDH17', 'TULP2', 'AGR3', 'CABP5', 'VTRNA1-1', 'VTN', 'COL26A1', 'ITPK1', 'ISCA2', 'CHRNG', 'KLHL35', 'GPR45', 'CD59', 'LOC440173', 'NCF4', 'CXCL3', 'MAS1L', 'CLEC4C', 'TRIM61', 'SRP14P1', 'MBD1', 'ANKIB1', 'SERTM1', 'WDR13', 'TNNT2', 'OPN1LW', 'NME3', 'DEPDC1B', 'HLA-DPB1', 'DET1', 'GPR61', 'VPS28', 'SLC27A4', 'EXOC7', 'SNORD115-2', 'RNF20', 'HDC', 'SPCS3', 'TEX14', 'SEC23B', 'BOLA2', 'HDAC2', 'VWA5A', 'BLM', 'RNPEPL1', 'PRAMEF17', 'A2M-AS1', 'CPTP', 'NGFRAP1', 'REM1', 'CLDN8', 'SORL1', 'POU2AF1', 'MAML2', 'NUP153', 'CEP170B', 'RPS26P11', 'LRGUK', 'TMEM86B', 'CCDC113', 'TMC6', 'FADS1', 'MAB21L3', 'SNORA23', 'C12ORF43', 'AIM1', 'SPTBN2', 'PAX1', 'FAM189A1', 'USP25', 'LINC00882', 'COMMD8', 'FAM9C', 'ZNF841', 'INO80', 'KDM8', 'CLIC4', 'GJA9', 'ZP1', 'EIF1AX', 'PDCD2', 'NAA38', 'CDCA5', 'GCNT2', 'OR2L2', 'ZKSCAN7', 'IRX1', 'TRAF5', 'KRT23', 'SSR4', 'FERMT3', 'STRA6', 'TBC1D3P1-DHX40P1', 'ARMS2', 'IGIP', 'KRTAP17-1', 'CDH16', 'ATXN1L', 'MRPL23', 'FAM66E', 'SLC28A1', 'MTERF3', 'CIITA', 'TMC1', 'INGX', 'GATA1', 'ZKSCAN5', 'GOLGA8IP', 'DYNLRB2', 'VCAN', 'HIPK1', 'GPR141', 'KLHL3', 'C10ORF95', 'CEACAM18', 'KALRN', 'FAM126B', 'PROZ', 'NF2', 'NAGK', 'PEX6', 'COL1A1', 'MB21D2', 'SP110', 'NUCB1', 'SUPT20HL2', 'ATRX', 'FOXL2', 'THG1L', 'PSME1', 'ARV1', 'RAB42', 'IL7R', 'SDR42E1', 'C6ORF47', 'ERH', 'YAF2', 'DYX1C1', 'IL23R', 'PYGM', 'RNASEL', 'ICAM3', 'SNX15', 'KLRG2', 'HPVC1', 'PTTG3P', 'TNIP3', 'ENOSF1', 'KRT13', 'TAF1', 'RBM41', 'KCNV1', 'MT1E', 'FOXB1', 'GBX2', 'CCP110', 'NOVA2', 'GGA3', 'AUTS2', 'OR1J2', 'SERINC5', 'COPS7B', 'MRPL4', 'INPP5D', 'TTC17', 'ETV6', 'C3ORF20', 'KIAA0895L', 'PRKD3', 'ZNF772', 'CMAS', 'FN3KRP', 'SNHG15', 'ELAVL1', 'IGF2-AS', 'INSL4', 'PCGF5', 'XPOT', 'HSD3B2', 'SNORD19', 'KLHL8', 'LY6G6F', 'GKAP1', 'EIF3D', 'TUSC5', 'FAM171B', 'GAB2', 'TMEM31', 'SLC8A2', 'ARHGAP9', 'DGCR5', 'SRRM1', 'BAX', 'KCNB2', 'SEPT12', 'ARL1', 'KLK4', 'CYB5D2', 'APOBEC4', 'NKX6-2', 'PAX8', 'MSTO2P', 'TNS2', 'C9ORF139', 'OR9I1', 'MTM1', 'WRAP53', 'ZBED3', 'TTBK2', 'PTPMT1', 'TECPR1', 'KDM6B', 'USP16', 'HRNR', 'YTHDF2', 'TPD52L3', 'LYRM7', 'OR4D2', 'SLC44A2', 'RPL36', 'TMEM107', 'OR10W1', 'CHN2', 'C19ORF57', 'HSPB6', 'MCRS1', 'SNORA66', 'RPAIN', 'FSCN3', 'C22ORF39', 'PAPOLB', 'KIAA1191', 'MMD', 'LINC00628', 'FAM107A', 'CYP1A1', 'JMJD6', 'CCDC137', 'POLR2A', 'TAOK2', 'SIGLEC12', 'SNORD49B', 'RFPL3', 'TMEM189-UBE2V1', 'PI15', 'OR6K6', 'HAO1', 'ANKRD36', 'RORB', 'PROCR', 'ADGRG5', 'CCL8', 'ZDHHC16', 'GNL3L', 'LRRC14B', 'PIF1', 'DHX33', 'ZBTB38', 'AIFM2', 'NPR2', 'S100A5', 'ZNF20', 'MLH3', 'EBI3', 'SFMBT2', 'RGS9BP', 'STOX2', 'MMACHC', 'OR14A16', 'NACC1', 'APOA4', 'ATM', 'LINC00112', 'SCARNA18', 'ARRB2', 'PAPOLG', 'C1ORF61', 'TAS2R8', 'PTCHD3P1', 'NTN4', 'MTHFSD', 'NR1I2', 'PTPRCAP', 'SATB2-AS1', 'RNF126', 'SMCHD1', 'MYO18A', 'SLC43A1', 'HAO2', 'RDX', 'SNORD23', 'CCDC102A', 'COLEC12', 'DPH3P1', 'UNC5D', 'FZD10', 'SEPN1', 'BMP10', 'STAG3', 'NDUFA1', 'CTH', 'UMPS', 'UGT2B10', 'ART5', 'WASF3', 'TET1', 'APBB1IP', 'ZHX1', 'CNTROB', 'ELF5', 'TRMT13', 'RPL28', 'KIF3B', 'PGA5', 'AS3MT', 'C2ORF57', 'MRPL51', 'TBC1D2', 'MRC1', 'MMS22L', 'WDR5B', 'TRIM6', 'METTL22', 'TONSL', 'OR52A5', 'MND1', 'PROK1', 'NOL11', 'C12ORF4', 'TMEM220', 'METTL24', 'SPC25', 'DNMBP-AS1', 'BLID', 'SMEK3P', 'MUTYH', 'CAPZA2', 'NCOR2', 'EXT2', 'CD47', 'LYL1', 'KLHL4', 'PRIM1', 'ALDH1L2', 'PRPF18', 'VSX1', 'C1ORF162', 'MAP3K10', 'C9ORF72', 'GALNT7', 'DRAP1', 'HKDC1', 'IMMP1L', 'IKZF3', 'IFIT2', 'CD70', 'SMARCA5', 'NKX2-1', 'GTPBP2', 'GEMIN8P4', 'OR51G1', 'SNRPB2', 'CFI', 'SLC39A11', 'BANF1', 'VLDLR', 'MGC16275', 'FBXO24', 'TINF2', 'OSTC', 'TAF13', 'NEUROD1', 'MTNR1A', 'CFAP58', 'CBLB', 'RGL3', 'PIGZ', 'GABPB1', 'FAM45A', 'MMP25', 'DLX6', 'EPHX2', 'FAM160A1', 'SPATC1', 'TWISTNB', 'ZDHHC21', 'SNORD72', 'STK36', 'LOC100129034', 'RNH1', 'BLOC1S3', 'CDK19', 'OR8H2', 'HCN4', 'KRTAP20-4', 'FUT3', 'CLEC1A', 'SDK1', 'WDR18', 'OR6C2', 'SLC17A9', 'MRPL52', 'NINL', 'OR3A3', 'OR6B3', 'IRF8', 'ADGRF4', 'RGS11', 'PEMT', 'FAM127C', 'ZNF43', 'ZMYND19', 'ZNF441', 'FBXO9', 'CDC42EP3', 'GSTA1', 'CGB8', 'LINC00937', 'MIR205HG', 'SLC17A3', 'BTBD2', 'PIP4K2B', 'TPM3P9', 'DENND5B', 'TMEM212', 'SCCPDH', 'LCE4A', 'AKT2', 'FOCAD', 'OPA3', 'OLA1', 'SPIB', 'WDR25', 'MEPE', 'CLDN14', 'PLCL1', 'CACNA1B', 'RGS13', 'GIP', 'SNORD44', 'CALR', 'ECE1', 'RNASE11', 'CRYL1', 'FIP1L1', 'IDE', 'FUT6', 'MRPS9', 'LINC01547', 'WDR27', 'SLC25A35', 'PCDHA8', 'CD200R1L', 'TM9SF1', 'TG', 'P2RY10', 'TRAT1', 'NXF1', 'C20ORF27', 'FAM114A1', 'ZC3H18', 'FAR2', 'BPY2', 'EEF1E1', 'FAM186B', 'TGIF1', 'TMEM63C', 'FAM32A', 'LPAL2', 'SOAT1', 'SNORD115-14', 'MRPL12', 'GIGYF2', 'RBM11', 'EBNA1BP2', 'NANOS1', 'ZFAND6', 'VSIG2', 'RRP1', 'TEX12', 'CDYL2', 'FBN3', 'PSPC1', 'ZNF618', 'SSX5', 'DNTTIP2', 'ST13', 'LINC00410', 'CRISPLD2', 'RHOT2', 'GFPT1', 'QPCTL', 'GOLGA7', 'NKPD1', 'FNDC7', 'C17ORF51', 'GOT1', 'EFR3B', 'FAM181A', 'NPHS2', 'HOXD8', 'TTLL2', 'CBX3', 'PRDX6', 'TEFM', 'FAM69A', 'SCAPER', 'GRK4', 'SDCBP2', 'HLA-J', 'CCL24', 'ZYX', 'RAMP3', 'ITGB3BP', 'CLEC1B', 'HS6ST2', 'GJA10', 'CT45A3', 'ATP5I', 'TMUB1', 'RHBG', 'ARL3', 'NELL2', 'TMEM184A', 'STK39', 'ANKHD1-EIF4EBP3', 'H3F3AP5', 'ZBTB37', 'GBP4', 'SLC6A10P', 'N6AMT2', 'TMEM217', 'VEGFA', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 4.815420052957319e-13 NRMSE: 8.203860594165492e-14 MAPE: 6.451328363284029e-10 Pearson Correlation: 0.24135020238913632 Spearman Correlation: 0.1921622366393053 Coefficient of Determination: -26.985054063380932 RMSE: 5.484056842928981 NRMSE: 0.987513386921342 MAPE: 1408.04290311157 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 3.463701098128281, tolerance: 0.051756548208396 positive)
Pearson Correlation: 0.9978313208717604 Spearman Correlation: 0.9942298477562936 Coefficient of Determination: 0.9956453586358057 RMSE: 0.06472435199803117 NRMSE: 0.011026858612540874 MAPE: 52.91175914352229 Pearson Correlation: 0.3811846170557375 Spearman Correlation: 0.3239645431548338 Coefficient of Determination: -5.845282744700988 RMSE: 2.712280291580868 NRMSE: 0.4883999516658026 MAPE: 861.2527017892281 Predictor: RandomForests Pearson Correlation: 0.849048154622841 Spearman Correlation: 0.6686279124941542 Coefficient of Determination: 0.7175421745977208 RMSE: 0.5212767079670756 NRMSE: 0.08880806650545608 MAPE: 419.63666587051705 Pearson Correlation: 0.7807610526786283 Spearman Correlation: 0.7056378609483779 Coefficient of Determination: 0.5583171024730618 RMSE: 0.6889602474637249 NRMSE: 0.12406098020378954 MAPE: 203.16460213576408 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['CCDC105', 'DNAH2', 'LACC1', 'TNNC1', 'GSTM2P1', 'FAM167A-AS1', 'RASSF3', 'TOPBP1', 'DYNLT3', 'FAM74A3', 'ELFN1', 'SMEK3P', 'FMO3', 'NPHS1', 'NOL11', 'MAP2K5', 'BOLA1', 'WFDC13', 'CSRP2', 'BTN2A3P', 'HIST1H3E', 'MEP1B', 'SNRNP200', 'NHLRC1', 'ARRDC5', 'COBL', 'HOGA1', 'IL17C', 'TRABD', 'MAS1', 'METTL3', 'MICAL1', 'CNP', 'CLSTN2', 'INTS4P2', 'MAPK6', 'KIF1BP', 'RAB40A', 'KDM7A', 'CABP4', 'ARC', 'HKDC1', 'RCOR3', 'PTGIR', 'CSMD1', 'GAGE1', 'MYO6', 'SRRD', 'COL6A2', 'RNF31', 'IQCD', 'IPO9', 'AGER', 'CELF1', 'FAM13C', 'PAGE2B', 'CALCB', 'GAS2L1', 'GOSR2', 'TFPT', 'SDC1', 'HLA-DRA', 'VASN', 'PPP1CA', 'CREBBP', 'CECR5-AS1', 'TUBD1', 'TSPAN16', 'PHOX2A', 'ALOX12P2', 'MMADHC', 'ZNRF1', 'SAV1', 'CP', 'KLHDC3', 'RIC1', 'MRGPRD', 'FGFBP3', 'PDZD2', 'SUV420H1', 'VSTM5', 'NEU2', 'WHAMMP3', 'OR56A4', 'ZNF18', 'SCNN1B', 'C9ORF89', 'ZSCAN23', 'MATN2', 'TOX4', 'PAQR8', 'SNORA77', 'PPP1R7', 'LILRA5', 'RMND1', 'KCNK17', 'LRP8', 'OCLM', 'GPR179', 'MBD4', 'BACH1', 'NKX2-8', 'CREB3L2', 'TRMT1L', 'PTGS2', 'TAOK1', 'TRIM61', 'HLF', 'MED6', 'LOC392196', 'NUBPL', 'ERCC3', 'ZNF800', 'STKLD1', 'PFKM', 'KLHDC7B', 'SGIP1', 'TEKT4', 'ATG5', 'PLCXD3', 'ZNF99', 'TMEM255B', 'ARHGEF2', 'EGFEM1P', 'MRPL13', 'QTRTD1', 'MUM1L1', 'ABCB10', 'EPM2AIP1', 'KRT24', 'SUZ12', 'CEP76', 'LYZ', 'ACIN1', 'SELM', 'GPATCH8', 'LOC100132111', 'IPO5', 'CTAG2', 'MTM1', 'LDLR', 'MKKS', 'TMEM200B', 'LMCD1', 'LY6G6C', 'TSTA3', 'ZNF83', 'TDRG1', 'ZNF296', 'GATA3-AS1', 'FGF4', 'GIN1', 'NEIL3', 'FHOD3', 'TADA1', 'KLHL26', 'TMEM53', 'RIPK1', 'CMPK2', 'SH3GLB1', 'DYNLL2', 'C4ORF29', 'ZDHHC6', 'THAP9', 'CLEC12B', 'MCMDC2', 'DEFB105A', 'MC4R', 'LMF1', 'DMXL1', 'MUL1', 'EXOSC1', 'ARMCX1', 'C1QTNF2', 'ZFAND2B', 'ARNTL', 'GLUD1', 'MAP1S', 'NUFIP2', 'PABPC3', 'SPTB', 'NDUFA9', 'SLITRK5', 'GNB4', 'FAM63B', 'LEP', 'PEAR1', 'PXDN', 'NGLY1', 'NLRP12', 'ARFGEF3', 'PLEC', 'TPP1', 'UQCRFS1', 'SYNGR3', 'ATP6AP2', 'PRSS3', 'TWF2', 'CPNE9', 'RTN4R', 'SNORD50A', 'ADORA1', 'TAF10', 'AQP4-AS1', 'CHD8', 'CLEC4A', 'ZNF30', 'OR52H1', 'GDAP1L1', 'KCNJ6', 'AQP12A', 'GHRH', 'HILS1', 'DHH', 'LINC00320', 'TCERG1', 'MYO9B', 'CSN1S2AP', 'PRMT5', 'CACNG1', 'DBI', 'ANKMY2', 'MCOLN3', 'SCARNA15', 'SNORD42B', 'THSD4', 'SKIV2L', 'POP5', 'ABR', 'UNQ6494', 'SDHAF2', 'HOOK3', 'KCNE3', 'S100G', 'CCDC88C', 'RELN', 'SNAI2', 'NKTR', 'ZNF641', 'RPS26P11', 'CDS2', 'ITIH1', 'FAM171B', 'CHD5', 'RLN3', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.7421049733573004 Spearman Correlation: 0.7275074487870817 Coefficient of Determination: 0.5507197914816395 RMSE: 0.32020513218107904 NRMSE: 0.08755496219257929 MAPE: 212.5555056941705 Pearson Correlation: 0.05548808597750502 Spearman Correlation: 0.10384418758338634 Coefficient of Determination: -3.0491387498212985 RMSE: 0.7738716704152315 NRMSE: 0.38090421693248977 MAPE: 706.9396633997915 Predictor: ElasticNet Pearson Correlation: 0.7268983115206067 Spearman Correlation: 0.7123688848852185 Coefficient of Determination: 0.5282801556016097 RMSE: 0.3281041457138105 NRMSE: 0.08971482086350738 MAPE: 213.0632343922631 Pearson Correlation: 0.05199574371734276 Spearman Correlation: 0.07720545143954415 Coefficient of Determination: -1.5015653038854904 RMSE: 0.6082659998379959 NRMSE: 0.29939212560996414 MAPE: 585.817841731747 Predictor: RandomForests Pearson Correlation: 0.5649751963614121 Spearman Correlation: 0.5621554082582801 Coefficient of Determination: 0.29732830093818285 RMSE: 0.40044776644265506 NRMSE: 0.10949602466447056 MAPE: 236.569259670221 Pearson Correlation: 0.4201948777831716 Spearman Correlation: 0.3741667601840422 Coefficient of Determination: 0.16443228878242155 RMSE: 0.35154299117925436 NRMSE: 0.17303154113574268 MAPE: 243.10466661344944 Fold: 5 Protein: RB1 x_train_column_count: 371 x_train columns: ['TBC1D13', 'STX10', 'GPIHBP1', 'RIPPLY1', 'C1QBP', 'C16ORF70', 'DPAGT1', 'SLC25A52', 'CSRNP3', 'SMTN', 'PGM2', 'LIX1', 'GTF3C5', 'NFE2L3P2', 'LOC148413', 'FHIT', 'RNF212', 'LY6G5B', 'MRPL39', 'KLHDC4', 'CEP85L', 'PDHA2', 'GZMA', 'ANXA7', 'PHF21A', 'PDK4', 'YAE1D1', 'SLC27A4', 'CLCN6', 'CEP89', 'TSSC4', 'BTNL9', 'SOGA1', 'GABARAPL3', 'TYK2', 'C4ORF3', 'FAM186B', 'PSMA7', 'GUCY2GP', 'SNORD114-14', 'RNFT1', 'ZNF586', 'LRRC23', 'SNORD115-8', 'EIF4EBP2', 'STK17B', 'MFSD1', 'MTMR14', 'EID2B', 'FBF1', 'FAM19A2', 'BUB1B', 'SMUG1', 'GLT8D1', 'CES4A', 'MPP2', 'BMX', 'LRP1', 'GIMAP5', 'SIX2', 'ITPRIPL2', 'FLJ37201', 'FCRLA', 'SDHAP2', 'PCP4', 'RSL24D1', 'ZNF30', 'CRCP', 'MIR31HG', 'TSR1', 'PPP2R5C', 'OR52B6', 'RSAD2', 'IAH1', 'NUP205', 'CDH2', 'C8ORF74', 'AGPAT5', 'GSTM4', 'SPRR1B', 'PAPSS2', 'ARHGAP11B', 'IMPAD1', 'PIP4K2C', 'FUBP1', 'NCAN', 'OSBPL7', 'DAZAP2', 'LINC00957', 'PIWIL1', 'BRCC3', 'SNORD8', 'TMEM145', 'SLC25A32', 'DES', 'RGN', 'CENPE', 'ZNF675', 'LOC153684', 'HAUS5', 'JMJD1C-AS1', 'DUSP10', 'ZYX', 'SEPT3', 'XKRY2', 'IFI27L2', 'ZFHX3', 'COA7', 'HMGB4', 'CHCHD3', 'OR2W5', 'NCKAP5L', 'ZNF492', 'PRKACB', 'DDX46', 'ZBTB33', 'F8', 'ZNF536', 'TOP3A', 'GLTP', 'KRTAP3-2', 'MKS1', 'ALDH3A2', 'C1S', 'MIS18BP1', 'PDLIM5', 'TOM1', 'TIAF1', 'EBPL', 'ABO', 'LAGE3', 'LY75', 'ERGIC1', 'SERTM1', 'HADHB', 'DGKG', 'SPRR2E', 'ARHGAP5', 'DAGLA', 'PIGZ', 'OR10R2', 'POMGNT2', 'SIX4', 'ASCC2', 'MIR600HG', 'KIAA0907', 'KCNQ5', 'SMIM20', 'ZNF263', 'FARSA', 'NLRP5', 'TMED10P1', 'BRICD5', 'MNT', 'ATG14', 'FAM150B', 'MYRIP', 'SLC17A9', 'NOTCH2', 'C19ORF40', 'RAB11FIP2', 'AREG', 'CIRBP-AS1', 'GRN', 'CLTA', 'CBLN2', 'PCDHA1', 'NRK', 'DHRS12', 'SNORD117', 'TUBA1C', 'ADD2', 'DHX38', 'GIMAP7', 'LONRF2', 'CLTCL1', 'KCNK7', 'AGAP3', 'LRIT1', 'KTI12', 'CITED1', 'CD200R1L', 'SYNPO2', 'THY1', 'GRAPL', 'CHIA', 'KLC1', 'CDK5RAP3', 'C15ORF48', 'EID3', 'ATXN7L1', 'MAFB', 'HOXD13', 'CDC42EP4', 'VMAC', 'CHPT1', 'NPTXR', 'GPATCH2', 'VWA8', 'MDGA2', 'ZAR1', 'HS6ST2', 'ZNF766', 'CACNB1', 'GFI1', 'TINAGL1', 'NKX2-1', 'ANGPTL1', 'KHDC3L', 'KLRC4', 'KIAA0196', 'MAPKBP1', 'FAR2', 'DSPP', 'KDELC2', 'HOXA13', 'AAGAB', 'RHBDF2', 'GMPPB', 'IGFALS', 'EFNA5', 'ZNF692', 'LINC00628', 'CEACAM19', 'TPP1', 'TRIM14', 'SNORD115-39', 'FBXO43', 'ARIH1', 'USP3', 'HMGB3P1', 'MDM4', 'SULT1C2', 'ACSS2', 'NIT2', 'ANKRD30BP2', 'AZI2', 'BTBD19', 'D2HGDH', 'MIEF2', 'DRC7', 'PLBD1', 'PLK5', 'FAM210B', 'MPRIP', 'TMX1', 'LEMD3', 'ASL', 'TOP2B', 'TTC9C', 'ACSL6', 'ITFG1', 'GGT1', 'OR2D3', 'MAML3', 'TRIM29', 'OR1E2', 'STX8', 'CDC26', 'LMCD1', 'STX3', 'OR51M1', 'LINC00696', 'SPAG5', 'MAGI1', 'AP3B2', 'BBOX1', 'CPVL', 'EYS', 'TRIM3', 'EPSTI1', 'SCNM1', 'ZC3H13', 'PRCC', 'PUSL1', 'PRDM13', 'IP6K3', 'ID2', 'AZGP1', 'PLIN4', 'HDDC3', 'SNORD115-25', 'SP110', 'GLIS3-AS1', 'WDR60', 'ZG16B', 'EMB', 'PTPRE', 'LOXL1', 'NUDT16L1', 'DTHD1', 'DACH1', 'ETV1', 'NOXO1', 'TMEM39B', 'ELP2', 'HECW1', 'DPY19L1', 'TPTE2P3', 'PRKCD', 'DEFB125', 'ABCA13', 'CDC14C', 'CSF3', 'TRPC6', 'FABP5P3', 'POMZP3', 'SFXN5', 'RAD50', 'PRAM1', 'POLR2K', 'DHRSX', 'UGT1A9', 'BEAN1', 'MYOT', 'MIR503HG', 'MEIS1', 'ADCY2', 'CFDP1', 'NANOS2', 'TM9SF1', 'OR13J1', 'CERKL', 'AFP', 'GPX3', 'ZNF407', 'RIMS4', 'KIAA0226', 'RNF7', 'LINC00336', 'GPR139', 'DR1', 'DSG1', 'ZNF84', 'ZP3', 'FAM129C', 'LINC00698', 'ALKBH8', 'TCP10', 'TNC', 'RARB', 'A4GALT', 'KLHL42', 'NUP188', 'DUX4L2', 'CEP44', 'OR6V1', 'ADRBK2', 'C20ORF85', 'IFIT1B', 'EOMES', 'IRX2', 'CCSAP', 'RPGRIP1L', 'GBAP1', 'SF3B4', 'ZNF876P', 'GDNF', 'ID1', 'ZNF684', 'SLC13A2', 'PLCL2', 'MMAA', 'CHMP6', 'AMOT', 'WFIKKN2', 'SLC12A3', 'GDF10', 'PLCB1', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.8072004331056782 Spearman Correlation: 0.7636617707228909 Coefficient of Determination: 0.6515725392059946 RMSE: 0.13806888313681961 NRMSE: 0.06820810043167999 MAPE: 371.83710069015706 Pearson Correlation: 0.0732761060944343 Spearman Correlation: 0.10536540355864786 Coefficient of Determination: -7.831208356419928 RMSE: 0.7143144760166119 NRMSE: 0.3601609805863965 MAPE: 5175.297566113948 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.3212119027640199, tolerance: 0.002943482941498817 positive)
Pearson Correlation: 0.7658820545947016 Spearman Correlation: 0.7325446014006108 Coefficient of Determination: 0.5857173149533735 RMSE: 0.15055251503796888 NRMSE: 0.07437520194739178 MAPE: 440.8546119311409 Pearson Correlation: 0.09529765688434717 Spearman Correlation: 0.10641778575792717 Coefficient of Determination: -2.7921382026335784 RMSE: 0.46808148629631646 NRMSE: 0.23600905869769703 MAPE: 4444.968310618595 Predictor: RandomForests Pearson Correlation: 0.5777518267344762 Spearman Correlation: 0.4474758834468148 Coefficient of Determination: 0.19309208309548165 RMSE: 0.2101123654403618 NRMSE: 0.10379866193088817 MAPE: 178.118511126211 Pearson Correlation: -0.024129766975338012 Spearman Correlation: 0.07807329268444745 Coefficient of Determination: -0.13273997878021104 RMSE: 0.25582589382356796 NRMSE: 0.12898871277633864 MAPE: 416.24620240074313 Protein: CDH1 x_train_column_count: 836 x_train columns: ['TTC22', 'KCNH1', 'TMEM211', 'CATSPERG', 'LPA', 'MFI2', 'FLJ45079', 'LBR', 'CSMD1', 'F12', 'ENOX1', 'SLC7A14', 'ACTR3BP2', 'LIMK1', 'NDUFS6', 'SNORD115-27', 'DGCR6', 'NDUFAF2', 'GCNT4', 'SLC35F5', 'OGN', 'CLEC3B', 'DGKH', 'HOXA5', 'TTC19', 'TMEM130', 'ERMP1', 'SRRM5', 'CHRM3', 'GPR146', 'FRYL', 'TUBB2B', 'NPTX1', 'NR2F1-AS1', 'MPST', 'TTLL13P', 'PRRT2', 'OTUD6A', 'COA4', 'RPL13AP17', 'M6PR', 'TRIM37', 'SNX15', 'TTC31', 'EPHA2', 'RPS4Y1', 'BEAN1', 'CCNB1', 'TACC3', 'EIF3K', 'OR8B2', 'C4ORF33', 'OCRL', 'TRIM52', 'TBCEL', 'DTNBP1', 'TMEM135', 'WDR18', 'H2AFX', 'TMCO4', 'CCNJL', 'CYP46A1', 'CXCL16', 'PILRB', 'GPR87', 'DDX56', 'AOC4P', 'THNSL1', 'CSNK1G2', 'FAM81A', 'KLK10', 'FAM58A', 'IGDCC4', 'SPDYA', 'CC2D2A', 'NEDD4', 'EFCC1', 'ZNF768', 'DEFB114', 'SYBU', 'TLCD1', 'CKS2', 'PSMD4', 'CSRNP1', 'CYTH2', 'WDR83OS', 'CASP3', 'OR6Q1', 'ZNF595', 'MRPS34', 'MRPL23-AS1', 'ZSCAN30', 'PDLIM1', 'PSG9', 'PPP1R2', 'SGPP1', 'PWWP2A', 'MBTPS1', 'SLC50A1', 'SEPT1', 'VCX3A', 'TXNDC9', 'ATRIP', 'TSPYL5', 'ATP6V1B2', 'CNGA3', 'SAR1B', 'NUP54', 'OR2K2', 'DUX4L5', 'SNORA27', 'GFRA1', 'FDPSP2', 'RAB13', 'SEPW1', 'CA14', 'LYPD6B', 'KRTAP20-3', 'TRAM2', 'ZNF697', 'SNORD86', 'CFH', 'TCP10', 'TLE4', 'ACOT2', 'SNORD91A', 'CERKL', 'FGF6', 'CBLN1', 'CWC27', 'B3GNT2', 'CAPN10', 'NGFR', 'SUMF2', 'AFM', 'PNLDC1', 'RPS6KA1', 'SERPINB8', 'KCNE3', 'LOC256880', 'ZFP28', 'NOL4L', 'ATP9A', 'GALNT9', 'PPY', 'ADGRF4', 'DFNA5', 'ZNF283', 'USP6', 'OR10J3', 'LINC00696', 'AMBP', 'FAM65C', 'MLKL', 'WNT11', 'CARKD', 'CLRN1-AS1', 'SH3RF2', 'PCDHGC3', 'ARSJ', 'TARM1', 'MLN', 'DCAF8L2', 'EPO', 'ERICH4', 'EIF3A', 'TUFT1', 'EEF1G', 'RIMBP3C', 'KCNT1', 'ACAD10', 'CHRND', 'BCDIN3D', 'STK10', 'PHOX2B', 'AK3', 'SNAR-A4', 'AGPAT5', 'RHBDF1', 'JMJD1C', 'FGFR1', 'LINC00202-1', 'RPL34-AS1', 'RTL1', 'C2ORF66', 'ZNF136', 'KLLN', 'SAMD4A', 'MRPS36', 'SLC7A5P1', 'GPX7', 'ZNF324B', 'NFKBIA', 'DOHH', 'CSTF2T', 'MAL2', 'C1ORF95', 'FZD8', 'PRTG', 'TIFAB', 'CAMSAP2', 'C19ORF38', 'RAC3', 'SUN3', 'DICER1', 'MS4A8', 'LINC01548', 'UBAP2', 'ZNF221', 'RFX8', 'DNAH3', 'GCOM1', 'SRGAP3', 'CDC14C', 'C11ORF94', 'PSMD8', 'AOX2P', 'TEKT1', 'IL17RE', 'NANOS1', 'CUEDC1', 'GAS6', 'GAMT', 'BTN3A3', 'SNORA2A', 'CCL15', 'ADAMTS12', 'SOGA1', 'DNAH8', 'GRM1', 'OSBP2', 'KIAA1211L', 'D2HGDH', 'ZBTB17', 'SLC6A4', 'EPHX1', 'ZNF133', 'C8G', 'MACF1', 'PTK7', 'HHEX', 'RPL23AP7', 'CHMP2A', 'MATR3', 'FAM101B', 'CXORF49B', 'LYAR', 'ARPC1B', 'KRTAP12-3', 'MTF2', 'MAP3K9', 'ALOXE3', 'RBL2', 'RGS16', 'ZNF562', 'TRADD', 'CDKL4', 'SNORA37', 'FAM199X', 'ADAMTSL4', 'PML', 'CTIF', 'LPIN1', 'TBC1D9', 'SIAH2', 'CREBRF', 'MRGPRG', 'TRPC3', 'TESK2', 'LTB4R2', 'PSMD7', 'PQLC2', 'SNORD10', 'WRAP53', 'LINC00264', 'C1ORF52', 'MFSD6L', 'TMEM132B', 'DPP10', 'ZMAT4', 'PGM2L1', 'AMER3', 'OR2F1', 'ZNF295-AS1', 'RHOD', 'FUT1', 'WDR61', 'HOXD12', 'LCE1B', 'SLC2A9', 'HMBS', 'CDK9', 'PLEKHA1', 'SUGP2', 'UBA52', 'LAPTM5', 'MYH15', 'CD6', 'IL1RN', 'C10ORF10', 'CLN3', 'AANAT', 'CRELD1', 'DNTTIP2', 'CERS1', 'TREM2', 'NASP', 'CACNB3', 'GOLGA3', 'TREML4', 'CDHR1', 'HRAS', 'KHDC1', 'C17ORF49', 'PGLYRP4', 'AP2A2', 'TMEM244', 'GEMIN5', 'TAS1R1', 'FAM168A', 'ADAR', 'IRGM', 'SRPK2', 'GFRAL', 'RILPL1', 'HECTD3', 'SMIM7', 'LRRC20', 'PRKAG1', 'HIBCH', 'CST4', 'ASH1L-AS1', 'FOXO3', 'FERD3L', 'SOHLH1', 'CTBP2', 'PSMG3', 'PEAK1', 'FAM111A', 'IGFL1', 'BARX1', 'EYA4', 'ARFGEF2', 'TNFSF18', 'RAC2', 'ZNF45', 'PSME4', 'CMTM6', 'ARID4A', 'PAX8', 'WNT2', 'RASGRP3', 'SLITRK6', 'LY86-AS1', 'HDAC7', 'C20ORF173', 'KRTAP10-6', 'APBA1', 'DEFB134', 'SMC4', 'PODXL2', 'TRIM17', 'ACOXL', 'TTC14', 'FCRL2', 'DUSP22', 'SLC25A31', 'TXNIP', 'GALNTL6', 'ROS1', 'MYH6', 'SYTL4', 'SNORD12B', 'VPS37B', 'NDUFAF6', 'ARRB2', 'GABARAP', 'POU2F2', 'KIF21A', 'IMPDH2', 'XKR6', 'CCDC88B', 'OR10A6', 'STX7', 'TAF1L', 'ENOSF1', 'PC', 'SPATA20', 'UBA2', 'PAX5', 'CS', 'ZNF525', 'MYOF', 'APBB1', 'CUL4B', 'ADCY5', 'GGH', 'CHD1', 'GRIA1', 'NFKBID', 'GUCA1A', 'GOLGA6L6', 'LINC00926', 'SP140L', 'NKX2-5', 'TSSC4', 'RRNAD1', 'GTF2H2', 'OR7A5', 'XPOT', 'DLGAP4', 'POLG', 'SLC25A13', 'RNF216', 'TIMM13', 'STIM2', 'LRRC15', 'C14ORF39', 'PDCD4-AS1', 'HIST1H3E', 'PPP1R16A', 'DNMBP-AS1', 'MARCKSL1', 'PPP1R12C', 'KRTAP23-1', 'UGT1A1', 'ZNF419', 'TJP2', 'IL34', 'EVI2A', 'CCL3L3', 'AGO2', 'SHISA4', 'STS', 'MGRN1', 'EFNA4', 'PLEKHM1', 'MARCH2', 'OR51G1', 'FUT9', 'NDST2', 'TMEM98', 'ABHD5', 'PARP15', 'P2RX1', 'LMX1B', 'ING3', 'TEAD3', 'EHD4', 'C11ORF95', 'SEC61A1', 'MYC', 'HLA-DRB1', 'ADCY3', 'NAT8B', 'PSEN2', 'TMEM54', 'GJC1', 'NDUFA5', 'LOC100288778', 'NRAS', 'ZNF28', 'RIMBP2', 'FAM107B', 'GPR18', 'MOGS', 'TUBA1A', 'HAPLN4', 'ARX', 'CHRNA2', 'GPKOW', 'TTLL3', 'SCARA5', 'C1ORF123', 'ILK', 'GCNT7', 'PTPRR', 'DAD1', 'NPBWR2', 'INA', 'STAG2', 'ZNF281', 'PI4KA', 'FRAT2', 'GPR135', 'DKFZP434L187', 'SLC7A11', 'RBFOX3', 'REG3A', 'FNBP1', 'STXBP6', 'TIMM22', 'SNX14', 'HIST2H2BF', 'SLC38A7', 'PIK3C2A', 'CENPT', 'AFAP1L2', 'ABTB2', 'NOP9', 'C11ORF70', 'TMEM256', 'SORD', 'CAPN9', 'ASPDH', 'EPS8L3', 'ISYNA1', 'CELF3', 'CYP4F3', 'METTL21A', 'LYSMD4', 'OR6Y1', 'LMNB1', 'P2RX7', 'CCL26', 'CTXN2', 'PRDM16', 'MPPED2', 'AQP7P1', 'TMEM95', 'UGGT2', 'SNX12', 'KATNBL1', 'STX3', 'METTL12', 'AP2B1', 'ALDOB', 'GMPPA', 'GRIA4', 'C1ORF228', 'CYFIP1', 'MFGE8', 'EIF4ENIF1', 'SYMPK', 'FTSJ1', 'LRRC19', 'BGLAP', 'PPFIBP1', 'CCDC134', 'RAMP3', 'MTG1', 'GUCA1B', 'HEBP2', 'MPDZ', 'ZBTB20', 'C3ORF58', 'RPTN', 'VPS4A', 'TMCO1', 'SNX22', 'DPEP2', 'C7ORF43', 'APMAP', 'HLF', 'RUVBL2', 'HNRNPA2B1', 'RBP7', 'CASZ1', 'KRTAP2-1', 'GGA2', 'CCR1', 'ASB4', 'RCC2', 'AGPAT1', 'RBM15B', 'SQSTM1', 'LPO', 'HK1', 'FAM222A', 'ALDH2', 'NPNT', 'COG4', 'FRMD7', 'ULK4P2', 'CDC23', 'APOC2', 'PRG2', 'ZSCAN12', 'KLHL24', 'FLOT1', 'FAM180B', 'COA3', 'DNAJC30', 'LRRC58', 'PMF1', 'ZNF343', 'KLHL36', 'COQ2', 'HSPE1', 'SLC48A1', 'SLC22A23', 'PACS2', 'LPAR5', 'IFI30', 'SERTAD3', 'CPS1', 'SNORD15B', 'MGMT', 'LINC00161', 'ACY1', 'TPTE2P6', 'FLG2', 'SEC24B', 'MARC1', 'OR5AP2', 'ADIPOR1', 'ATF6B', 'PCDHA13', 'LIPE', 'MYH10', 'OR1J2', 'COL6A5', 'EXOSC7', 'ETFB', 'YARS2', 'TAOK3', 'EXOC3-AS1', 'ACTR1B', 'SUPT7L', 'MRPL43', 'ZNF513', 'UBE2Q1', 'PRKAB1', 'NAIF1', 'HERC3', 'PMEL', 'GPR180', 'DALRD3', 'LY86', 'STARD10', 'CYTH4', 'LOC115110', 'ELK4', 'SORT1', 'NINL', 'CEP170P1', 'KCNN4', 'AP1M2', 'NT5DC1', 'FOXL2NB', 'LINC00623', 'POLR3A', 'TICAM2', 'CECR5', 'SELM', 'MLH1', 'DPH5', 'C6ORF10', 'PART1', 'CYB561', 'DYNC1I1', 'OR5A1', 'SNORD116-20', 'ZDHHC8P1', 'ZNF493', 'WNT1', 'CCNT2', 'ANO1', 'RBM25', 'ZC4H2', 'ZNF879', 'SARDH', 'LINC00661', 'GPR149', 'PRAMEF10', 'ZNF296', 'ZCCHC24', 'MTHFSD', 'GPATCH3', 'ALG1L', 'TXLNB', 'USP9X', 'KPNA5', 'FAM195B', 'TBX4', 'OR10J1', 'SLC47A1', 'TLK1', 'ARHGDIA', 'RNF113A', 'DOCK1', 'XKRY2', 'ZNF737', 'WDR37', 'WDR81', 'TECTA', 'RWDD2B', 'GYS2', 'PPP1R32', 'GDF11', 'GRB14', 'U2AF1L4', 'VPS41', 'CAPN12', 'DENND6B', 'RFTN2', 'SNORD115-7', 'C6ORF47', 'CCDC126', 'TOMM70A', 'PDZK1IP1', 'PCDH19', 'CHST6', 'NAA15', 'HR', 'PDDC1', 'FAM216A', 'DCBLD1', 'NUTM2F', 'BDKRB1', 'AGGF1', 'ARSE', 'REEP1', 'FAM26E', 'LRIG3', 'BTG2', 'CCDC116', 'CEP170', 'C1GALT1', 'HSFY2', 'TMOD2', 'GSG1', 'HIF3A', 'SNRNP70', 'HIST2H2AC', 'FGF1', 'ETNPPL', 'IPCEF1', 'C17ORF62', 'DCAF16', 'LRRFIP1', 'SLC35F1', 'OR2V2', 'IFNGR2', 'OGG1', 'AFAP1L1', 'RBM39', 'CCNI2', 'OR5C1', 'ALKBH1', 'PNMA3', 'CEP126', 'PCDHGA5', 'NPTX2', 'PROP1', 'PCDHA11', 'GRIK1-AS1', 'IFNA17', 'RMDN3', 'CENPI', 'ZMAT5', 'PPP3CA', 'RRBP1', 'SGCB', 'ZBTB41', 'PYGL', 'MS4A12', 'LIME1', 'PKD1L2', 'GTF3C4', 'CTDP1', 'LINC00092', 'TSG101', 'FMO5', 'FCHO1', 'LOXL3', 'OLMALINC', 'CNNM2', 'PUF60', 'XK', 'IL2RA', 'ZMAT2', 'C16ORF92', 'POLR3B', 'PSAT1', 'CDKN1C', 'NUDT16P1', 'GAS5', 'AIDA', 'KRTAP19-4', 'LOC100132287', 'TBC1D2B', 'CD46', 'TMEM18', 'GHSR', 'RGS8', 'AGL', 'PEMT', 'PPCDC', 'PVRL3', 'KCNK10', 'HNRNPDL', 'APP', 'FBXO28', 'TMEM194A', 'CCDC58', 'TTC36', 'ZDHHC11', 'GRHL2', 'ZNF831', 'TMEM99', 'SQLE', 'GALE', 'SERP1', 'CBX2', 'RTN4', 'GUSB', 'ELMO2', 'USP8', 'SNORD11', 'HAUS2', 'PLA2G2F', 'INS', 'GRIK4', 'SYT12', 'KLRC4', 'SYCP1', 'MUC13', 'LAMB3', 'ZNF836', 'PXDC1', 'AP3M1', 'SSTR2', 'TRIM27', 'ARRDC4', 'GLRA3', 'SCUBE3', 'SLC25A32', 'XKRY', 'TMEM97', 'SNORD60', 'TK1', 'TEX35', 'KRI1', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.5010270559986978e-14 NRMSE: 3.982400331197569e-15 MAPE: 1.3317727980195851e-11 Pearson Correlation: 0.0712578815935876 Spearman Correlation: 0.11730071447274903 Coefficient of Determination: -6.197498248890445 RMSE: 3.1167547931263706 NRMSE: 0.6129190759525616 MAPE: 7213.302521375198 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 2.1733457684950523, tolerance: 0.0682205483025332 positive)
Pearson Correlation: 0.9998961029154686 Spearman Correlation: 0.9997470079919042 Coefficient of Determination: 0.9997821771449593 RMSE: 0.016619508961931116 NRMSE: 0.0026463343463474275 MAPE: 7.176079420553797 Pearson Correlation: 0.14872614542085516 Spearman Correlation: 0.2415616154814898 Coefficient of Determination: -4.768309325653439 RMSE: 2.7902050652255266 NRMSE: 0.5487021032478273 MAPE: 5960.363584406276 Predictor: RandomForests Pearson Correlation: 0.7850684538943103 Spearman Correlation: 0.7147937494550167 Coefficient of Determination: 0.61097216688682 RMSE: 0.7023551998557795 NRMSE: 0.11183643830702517 MAPE: 137.29491556346292 Pearson Correlation: 0.6412713907176999 Spearman Correlation: 0.5959899749373434 Coefficient of Determination: 0.40227554238292995 RMSE: 0.8981779010558762 NRMSE: 0.17662934869636315 MAPE: 404.3381259646642 Protein: CDH2 x_train_column_count: 474 x_train columns: ['PWRN2', 'PHLDB3', 'ISCA1P1', 'SORL1', 'HMGXB3', 'B4GALT7', 'ZUFSP', 'IFITM5', 'CACFD1', 'WDFY3', 'TRRAP', 'IKZF2', 'PTPRA', 'LRRC16B', 'FRZB', 'HRK', 'DUOX1', 'CENPF', 'FAM175A', 'ARMCX6', 'SBF1', 'CD164', 'CAPS', 'ACAD9', 'SEC14L4', 'CRX', 'FOXP4', 'PIGB', 'GBA2', 'CST9', 'TRAF6', 'CXCL9', 'PAGE3', 'UTP20', 'TMEM9', 'MROH2B', 'SNORD115-3', 'HIST1H3A', 'OR5J2', 'ZAR1', 'RBPMS', 'PLD1', 'PHKA2', 'BAALC', 'EDN3', 'LAMA1', 'CADM1', 'RPF2', 'CSF1R', 'TM4SF5', 'HNRNPA3P1', 'OR13J1', 'IL5', 'LOC613037', 'FGFRL1', 'RBFOX2', 'ZC3H14', 'B3GALNT1', 'CLIP3', 'ANKRD23', 'SORCS1', 'SNORD35A', 'CASC3', 'AKR1C4', 'AKIRIN2', 'STEAP2', 'ZBTB44', 'ARPP19', 'DHRS9', 'CYSLTR2', 'UROC1', 'SARNP', 'ITPR3', 'CMTM3', 'PLA1A', 'FAM175B', 'C8G', 'PROKR2', 'ARHGAP17', 'C3ORF36', 'MYADM', 'FAM47A', 'PHAX', 'ANXA4', 'PDE2A', 'LINC01020', 'SGK223', 'FZD3', 'POFUT2', 'SNORD17', 'LINC00628', 'CLK2P1', 'NANP', 'BUB1', 'CASR', 'ZNF519', 'SLC23A3', 'ZDHHC11', 'GREB1', 'SLC6A20', 'SPATA2', 'HIST2H4A', 'PPP2R5B', 'DYNC2LI1', 'PLXNB2', 'HBD', 'CLDN23', 'ZBTB1', 'PPP6R2', 'UGT1A1', 'DCDC1', 'SP7', 'ARMC1', 'RNF220', 'C6ORF106', 'GMNN', 'OR2T10', 'CTR9', 'SYT9', 'MGC16275', 'CRYAA', 'CCL15', 'ELOVL7', 'RPL8', 'OXCT2', 'CRYZ', 'MFSD10', 'BEX4', 'OR10C1', 'NFE2L3P2', 'LOC728392', 'SV2A', 'PRDM6', 'IRX4', 'SLC2A6', 'ZNF444', 'GNRHR', 'MORC4', 'TUBB1', 'CREB1', 'C11ORF95', 'THEMIS2', 'LINC00882', 'DKFZP434L192', 'TUT1', 'ACSS2', 'TMEM256', 'MAGEB6', 'ZNF599', 'MYLK4', 'SYCE2', 'EOGT', 'LIF', 'SLC35G5', 'NDOR1', 'AKAP5', 'KIAA0930', 'SCUBE3', 'PRRC1', 'PCF11', 'HOXA11', 'LOC391322', 'GABARAPL1', 'CKLF', 'RNF138', 'SDK2', 'CYP2S1', 'C9ORF69', 'UCA1', 'GGT8P', 'CHPF2', 'THNSL2', 'FLRT3', 'RRAGB', 'IKZF5', 'KLHL5', 'C1ORF122', 'RPS7', 'XRCC2', 'GLUD2', 'KLLN', 'MOG', 'FAM150A', 'CCDC7', 'SNORD94', 'EFNA4', 'OR1E2', 'LYNX1', 'LINC00894', 'RFTN1', 'VWDE', 'FBXO2', 'TEX37', 'RNASE13', 'KPNA1', 'ZFYVE16', 'KLHL22', 'UCK1', 'ALDH7A1', 'ANO1', 'IRF4', 'ERCC6', 'MUCL1', 'PIM1', 'LETM2', 'ZNF93', 'MAN1C1', 'VPS37A', 'PRSS21', 'RNF166', 'FNTB', 'ABCA4', 'GDPD1', 'GMCL1P1', 'HIST1H2BN', 'AHCTF1', 'TSPYL4', 'RPLP0P2', 'ZNF837', 'RGS10', 'ITGAV', 'TMPRSS3', 'PAM', 'CENPN', 'THG1L', 'KCNQ2', 'COL3A1', 'WFDC6', 'ARMCX1', 'EHHADH', 'SLC25A45', 'CYP4F12', 'HBS1L', 'BANP', 'ATP13A5', 'ZNF71', 'CLEC19A', 'TTTY14', 'PHRF1', 'CUTC', 'FAM170B', 'HPVC1', 'SNORA11C', 'MMP2', 'NMU', 'ZNF576', 'SUSD6', 'IL22RA1', 'COL4A4', 'PHF1', 'DEFB1', 'TMEM105', 'SOHLH2', 'LOC100270804', 'FITM2', 'RPS6KC1', 'CSN1S1', 'FAM71F1', 'SNAR-C2', 'MYO18B', 'MYT1L', 'NINJ1', 'MESP2', 'TMEM254-AS1', 'ST6GAL1', 'FAM57B', 'MRM1', 'UBAP2', 'NEURL3', 'C12ORF50', 'PRR22', 'CAST', 'CXCL10', 'PREX1', 'LRRC8A', 'DIO1', 'DDB1', 'IL5RA', 'TRPM6', 'TSPAN14', 'SNORD96A', 'EP300', 'SNORD4A', 'GNGT1', 'NDUFAF7', 'GPRC5B', 'OR13C9', 'DNASE1L2', 'CHSY3', 'KRBOX4', 'SAMD9L', 'CAPN2', 'RYR1', 'LAMA4', 'MGC15885', 'GLYAT', 'OCIAD2', 'TRDN', 'GPR4', 'CCDC113', 'CYP26C1', 'HAPLN4', 'TTLL12', 'ZBTB40', 'B3GNT7', 'APOA4', 'DDX27', 'AGPAT6', 'TRMT10A', 'SMC3', 'BCAP31', 'MAGEC1', 'KIAA1217', 'UXT-AS1', 'LRRC61', 'PPM1G', 'RAD54L2', 'LIPE', 'DUSP11', 'PPP1R26', 'ARPC5L', 'MPP6', 'IGSF11', 'TRIM58', 'RAF1', 'SUSD3', 'TPH2', 'BMX', 'HAUS3', 'ABCB10', 'ABHD8', 'SNORD27', 'CGNL1', 'C1QL4', 'HOXB2', 'DNASE1', 'TBX4', 'TRIM50', 'DPP3', 'SLC6A15', 'ARHGAP4', 'PTBP1', 'POTED', 'MAP3K9', 'HSF1', 'EMC1', 'TSPO2', 'OR5B3', 'NUDCD3', 'RRM2', 'PDSS2', 'WFDC11', 'TUBB7P', 'C10ORF32', 'RPL32P3', 'TUBGCP5', 'PRY2', 'TMEM133', 'EXOC6B', 'SARDH', 'ACTA1', 'LOC285627', 'VWA2', 'RPE', 'HEATR6', 'ZFP36L2', 'DUSP23', 'ELMO2', 'DTHD1', 'PEX5L', 'IRX2', 'STMN3', 'ECT2L', 'MSL1', 'UHRF2', 'RPL14', 'SLC17A4', 'EPHX1', 'CRISPLD1', 'SLURP1', 'LSM2', 'HDAC11', 'CACNB2', 'CRMP1', 'KIF20B', 'UBE4A', 'POU2AF1', 'GALNT11', 'SPRED2', 'SARS2', 'PANK3', 'RGPD8', 'PNN', 'STARD7', 'SF3B2', 'ENTHD2', 'CLEC4M', 'NSFL1C', 'ZBTB25', 'ACAD10', 'DHRS12', 'HM13', 'LAMB2P1', 'MOV10L1', 'TMEM167A', 'ADCY6', 'PACSIN1', 'DIRC1', 'PAQR3', 'PTPRC', 'WNT5B', 'KCTD9', 'PNMAL1', 'CYP4A11', 'SEC1P', 'ZNF606', 'KCNA10', 'LGMN', 'CA13', 'BRD7', 'WTIP', 'TTTY15', 'GOPC', 'NOTO', 'LOC392196', 'HBZ', 'NEDD8', 'SCARB1', 'CTDNEP1', 'PHF10', 'HDHD3', 'ANKRD20A9P', 'TIMM17B', 'DDAH2', 'SPAG5', 'TMPPE', 'CCNI', 'GLYR1', 'OR4D6', 'ADGB', 'RAD23A', 'FBXO5', 'PSMB7', 'FGF2', 'ADAM7', 'ADRBK1', 'TRUB1', 'ZMYM2', 'PKIG', 'PPP1R12B', 'HEXDC', 'ABHD2', 'RAMP2', 'HLA-DMA', 'OR8K1', 'SART1', 'ERH', 'KRT6A', 'MFSD6L', 'KIAA1467', 'EDNRA', 'DOCK4', 'STAMBP', 'C4BPA', 'STRC', 'PIWIL2', 'RHOJ', 'WRB', 'TNRC6C', 'DHX33', 'LMO3', 'GIMAP5', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.9521173697991793 Spearman Correlation: 0.9408426753378024 Coefficient of Determination: 0.9065274858733066 RMSE: 0.1097997610646614 NRMSE: 0.053926507079544904 MAPE: 1073.767950065226 Pearson Correlation: 0.002285104280236711 Spearman Correlation: 0.04137712612021586 Coefficient of Determination: -16.166467659148626 RMSE: 1.7281120008397526 NRMSE: 0.6462285215263738 MAPE: 35320.19144805702 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 7.636918517345354, tolerance: 0.0069390679727214565 positive)
Pearson Correlation: 0.9023515506188482 Spearman Correlation: 0.8930027555554603 Coefficient of Determination: 0.8135646843875785 RMSE: 0.15506847795118164 NRMSE: 0.0761595589367819 MAPE: 1707.7560974199223 Pearson Correlation: -0.02508376945601935 Spearman Correlation: 0.025082638290569618 Coefficient of Determination: -3.5651271584630386 RMSE: 0.8911644548685717 NRMSE: 0.33325148359986223 MAPE: 2448.553169053604 Predictor: RandomForests Pearson Correlation: 0.6309248771343509 Spearman Correlation: 0.5792173646076578 Coefficient of Determination: 0.18470067232314735 RMSE: 0.3242783653463006 NRMSE: 0.1592644591848635 MAPE: 809.2819247925979 Pearson Correlation: 0.18434778324796766 Spearman Correlation: 0.231549310526883 Coefficient of Determination: 0.012869337102421885 RMSE: 0.4143990370499434 NRMSE: 0.15496476901069253 MAPE: 1016.9338875653058 Protein: CDH3 x_train_column_count: 75 x_train columns: ['GPR88', 'FUT9', 'NDUFB2-AS1', 'KLHL9', 'PSMA7', 'SERPINA3', 'RBM4', 'ENPP6', 'ETV6', 'CSK', 'ANKRD17', 'GALNT12', 'UBR4', 'COL13A1', 'ARHGAP30', 'CRP', 'ZNF425', 'RPS27A', 'TISP43', 'HOXB2', 'RAPGEF5', 'MNAT1', 'DHRS4-AS1', 'SLC25A21', 'SFXN3', 'SLC5A12', 'FAM95B1', 'EPHA2', 'AGAP3', 'CCDC36', 'HKDC1', 'HIST2H3C', 'XKR8', 'C12ORF50', 'SERP1', 'STARD13', 'CCSER1', 'OCEL1', 'TSPAN6', 'KIAA0319', 'FAM92B', 'RPL37', 'TOP3A', 'PIAS2', 'KRTAP10-2', 'BRAF', 'LEAP2', 'SAMSN1', 'COL6A6', 'ANP32B', 'PPP3R1', 'SNORD15A', 'ZNF510', 'THEM4', 'VTRNA1-3', 'CPA6', 'SNORD115-3', 'MND1', 'MAN1A2', 'SNORD19B', 'EGFL7', 'DDX21', 'FOXA1', 'MRPL30', 'SPATA31D1', 'SERTM1', 'UOX', 'HIST1H2BJ', 'CALB1', 'TCIRG1', 'COL8A1', 'LOC401010', 'C10ORF35', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.5420400077747629 Spearman Correlation: 0.5429528402428069 Coefficient of Determination: 0.293807370028465 RMSE: 0.17123680813422668 NRMSE: 0.12013583104214141 MAPE: 575.8840722993984 Pearson Correlation: 0.4126013601592894 Spearman Correlation: 0.44133467998354103 Coefficient of Determination: 0.11612042766477682 RMSE: 0.2100218319429885 NRMSE: 0.1894836943160697 MAPE: 287.02503011415075 Predictor: ElasticNet Pearson Correlation: 0.5377109719332624 Spearman Correlation: 0.538426803112819 Coefficient of Determination: 0.28910942081749647 RMSE: 0.17180544075942394 NRMSE: 0.12053477069612165 MAPE: 595.930529010274 Pearson Correlation: 0.4387122728220491 Spearman Correlation: 0.46205314280726695 Coefficient of Determination: 0.1518859635961426 RMSE: 0.20572876517074593 NRMSE: 0.18561044864239656 MAPE: 333.9746717497922 Predictor: RandomForests Pearson Correlation: 0.5599754414439898 Spearman Correlation: 0.5483205506733841 Coefficient of Determination: 0.25987167356289953 RMSE: 0.17530287817929127 NRMSE: 0.12298849285744744 MAPE: 411.1020087522691 Pearson Correlation: 0.4934857435927026 Spearman Correlation: 0.5426626267160439 Coefficient of Determination: 0.1856433336807467 RMSE: 0.20159289509406703 NRMSE: 0.1818790273225733 MAPE: 217.91454410536068 Protein: PTEN x_train_column_count: 886 x_train columns: ['MRPL19', 'ZNF696', 'AOX2P', 'ADGRG4', 'CDR2', 'FAM78A', 'FAM200A', 'KIN', 'BAP1', 'RC3H1', 'SPAG8', 'HDAC10', 'MICAL1', 'OR2F2', 'RPS4X', 'PDZK1', 'FGF3', 'KCNAB1', 'G0S2', 'ST3GAL2', 'FBXO7', 'GOLGA2P10', 'SNHG8', 'KRTAP21-2', 'ENDOG', 'HEMGN', 'UGT1A4', 'KCNMB3', 'IFNA21', 'BRD1', 'RFPL2', 'GGNBP2', 'WDR90', 'SNORD110', 'CDH23', 'DOCK11', 'ATP13A1', 'AFM', 'AGRN', 'SERAC1', 'PAX9', 'ZNF57', 'KRT74', 'KCNS1', 'PAIP2B', 'FUK', 'UBE2J1', 'ACSF2', 'CHMP4B', 'OR5R1', 'RTL1', 'FAM45A', 'C10ORF76', 'ZIC1', 'SNAI3', 'CAMKMT', 'MAG', 'ZNF467', 'HECTD3', 'MAT2A', 'SWT1', 'PIDD1', 'GUCY1B3', 'TREM2', 'NACAD', 'PTGER4P2-CDK2AP2P2', 'HAUS8', 'ZC3H10', 'SLC9C2', 'NR2E1', 'PLSCR2', 'CLVS1', 'UBB', 'SNAR-A3', 'CREBBP', 'SRP68', 'ADGRA2', 'CD109', 'FAM155B', 'CUL7', 'ATAD3A', 'MGMT', 'MAGEB10', 'HPCA', 'ALS2CR12', 'SAR1B', 'CRYBA1', 'ZNF692', 'ENOX2', 'ABCC3', 'TCEAL4', 'TMEM260', 'LRRD1', 'NHSL2', 'KLHL17', 'SLC17A9', 'LIN9', 'ABCF1', 'PAX4', 'ACE', 'GSPT2', 'SPDYE7P', 'SLC41A1', 'SCAND1', 'SNX11', 'SNORA19', 'GEMIN7', 'MRPL48', 'DMTN', 'MYO1G', 'FOXB2', 'GRXCR1', 'OR5AP2', 'TGM6', 'BAG3', 'TRIML2', 'FLJ23867', 'ZC4H2', 'PLGLB2', 'HERC4', 'RAB3B', 'R3HDM2', 'CECR5-AS1', 'DRD2', 'DNAJB3', 'LINC00158', 'SYNPO2L', 'COBL', 'BCL11B', 'CHD4', 'NEDD4L', 'RRN3P3', 'PDE4D', 'SLC51A', 'MALSU1', 'DHX16', 'LIG4', 'KRTAP5-4', 'KIAA0355', 'EIF1B', 'TBC1D17', 'SALL2', 'MRGPRG', 'LOC90768', 'PUS7', 'TFAP2E', 'PADI3', 'ZNF71', 'KRT15', 'FBLL1', 'OR2M3', 'VAMP3', 'TTTY5', 'IGIP', 'DAND5', 'RAB3A', 'ZNF625', 'CCDC91', 'ZNF766', 'RHPN1', 'ZBTB44', 'MROH9', 'GRIP2', 'KRT33A', 'ANPEP', 'NRSN1', 'TNS2', 'USP34', 'PSG1', 'FKBP9P1', 'ATP11C', 'LOC388955', 'KANSL1', 'DDX11', 'FAM89A', 'SNORA77', 'BTN3A2', 'KCNMB4', 'ODC1', 'PEX26', 'MSMP', 'KATNA1', 'SUPT5H', 'OGFOD3', 'HIGD2B', 'INIP', 'ARPC5L', 'BET1L', 'GABRG3', 'STX5', 'OR4N3P', 'MPP6', 'CDC25C', 'KRTAP23-1', 'SNORD114-22', 'PPFIBP1', 'CEP295', 'OR51A4', 'SNORA59B', 'FAM124B', 'SHARPIN', 'DUPD1', 'CNFN', 'SGK494', 'SNORD20', 'STAM2', 'MRPS11', 'PCSK4', 'PECR', 'FUCA2', 'SIGLECL1', 'C17ORF89', 'UTP15', 'STRADA', 'ANKRD7', 'TTTY2', 'BIRC5', 'MUC2', 'TRAP1', 'DNM2', 'CD14', 'ZFYVE26', 'PLCXD3', 'LRRTM1', 'MST1R', 'HSD17B6', 'TERT', 'NFIA', 'ARMCX6', 'GABRA6', 'C9ORF16', 'SPANXN1', 'OR8D1', 'FBXO34', 'PZP', 'TIAF1', 'IRX3', 'C4ORF36', 'ZNF843', 'NUMB', 'FDPSP2', 'PFN3', 'TSPAN1', 'RAB4A', 'EIF1AX', 'NFKBIE', 'GNAL', 'TRIM72', 'POU2AF1', 'NOMO1', 'PKD1L1', 'ORC3', 'FGF9', 'PGRMC1', 'PTPN11', 'LVRN', 'C1QB', 'CBFA2T2', 'ERVFRD-1', 'POGZ', 'DOK5', 'XPO5', 'GNA13', 'ATP6AP1', 'IQCF3', 'JAK3', 'MT1DP', 'RAB8A', 'BCAR3', 'ALG11', 'ABCC12', 'BLOC1S4', 'CDC20', 'SLC35D2', 'ARMC2', 'OPA1', 'PLEKHJ1', 'ELMOD3', 'SNORD115-38', 'KCTD9', 'ZNF470', 'RNF166', 'GMNC', 'UNC119B', 'TIFA', 'MUC20', 'TMED8', 'HMGB3', 'TMEM169', 'LSM6', 'FFAR3', 'KRT37', 'ANKRD12', 'HSDL2', 'C2CD5', 'DESI2', 'KLK12', 'SOD1', 'PARVA', 'NDC80', 'SGPP1', 'GNPDA2', 'YBEY', 'GSDMA', 'CTSL3P', 'CLDN10', 'ZDHHC5', 'OR6K6', 'PNLDC1', 'WRNIP1', 'RCN3', 'SPATC1', 'RPL31', 'KCND1', 'CASP7', 'COL9A1', 'FABP12', 'CD84', 'METTL9', 'A1BG-AS1', 'SRPX', 'FBXO6', 'PROSER1', 'ATM', 'MC4R', 'CDCP2', 'ETV1', 'IL16', 'PDCL', 'PLEKHG4B', 'STYXL1', 'TMEM184C', 'FAM131B', 'ARSB', 'BST2', 'PNMAL2', 'RIMS2', 'LCA5L', 'SNORD22', 'C1ORF159', 'EME1', 'LZTS3', 'XPOT', 'OSBPL9', 'CTNNB1', 'APOL5', 'ACTN1', 'PPP2R5D', 'SNORD114-25', 'MUC16', 'SNORD50A', 'VTI1B', 'PRRT2', 'ZBTB22', 'LMNB1', 'FOXJ3', 'FKBP4', 'CALML3', 'MMP1', 'CLPP', 'KIAA0930', 'GGA1', 'TBC1D15', 'KIF1B', 'ADGRA1', 'SNORA30', 'EHD3', 'SERTAD1', 'ALPI', 'CHCHD4', 'TOMM7', 'DDB1', 'RNF40', 'PSMG1', 'SNORA47', 'SEC24C', 'ALDH1B1', 'NSUN4', 'SGPL1', 'CPNE7', 'PLA2G1B', 'LOC100240735', 'C5AR2', 'GPR176', 'C1ORF229', 'GARNL3', 'SPOP', 'LRRC16A', 'IL31RA', 'RTBDN', 'CXCL14', 'MDC1', 'ADGRL2', 'FEZ1', 'CAMKK1', 'NDUFS4', 'PHLDA3', 'LY6D', 'GLS2', 'SCN11A', 'CTNNA1', 'RGS2', 'MAP1A', 'RAPGEF3', 'CFHR2', 'LRRC4', 'ATP10B', 'RPS19', 'SLC25A37', 'LCMT2', 'CLDN14', 'FEM1B', 'SMC4', 'CSDC2', 'YIPF4', 'SLPI', 'ZNF833P', 'DIRC1', 'TP53I11', 'C5ORF58', 'PRSS1', 'BOD1L1', 'SF3B4', 'C2CD4D', 'LOC646471', 'CDS2', 'MRPS16', 'CCDC176', 'FAM160A1', 'IMPAD1', 'GNAI2', 'DHRS7B', 'PIGC', 'NCOA2', 'DTX3', 'ZFYVE28', 'NOL3', 'CDC42SE1', 'CA5BP1', 'SPG11', 'DEC1', 'CST7', 'KLHL38', 'TENM1', 'PLCB4', 'CACNA1G', 'MARCH2', 'ERC1', 'PRSS12', 'VPRBP', 'ANKMY2', 'POM121L9P', 'FAM196B', 'WNT8B', 'GOLPH3', 'KIR2DS4', 'GTF3C6', 'ZKSCAN8', 'LAMTOR4', 'KIFC3', 'ADAMTS4', 'BHMT2', 'SNORD9', 'ZCCHC8', 'ABCB1', 'GCNT2', 'ADAM33', 'GNG5', 'SNORD43', 'IKBKB', 'HIST1H2BM', 'DCUN1D2', 'MESTIT1', 'VWA1', 'CRIP2', 'PPP1R1C', 'IGLL1', 'TIE1', 'TMA7', 'MTERF3', 'ISCA2', 'NUCB2', 'IL7R', 'PPP2R3C', 'GOLGA8CP', 'CTTN', 'CRTC3', 'ZFAND3', 'CXCL10', 'SHMT2', 'PARD6A', 'OSBPL7', 'PDCD5', 'NBPF3', 'CDKN2D', 'CWH43', 'KIF27', 'LONRF3', 'C9ORF3', 'SLC35G2', 'RPS27A', 'RMDN3', 'SCARNA10', 'VBP1', 'ARRB1', 'NAP1L6', 'RNF115', 'DDX25', 'GPR89A', 'SLC25A26', 'MAP3K6', 'CD82', 'SCARNA23', 'GRPEL2', 'RPL29P2', 'SMR3B', 'DHRSX', 'KRTAP5-2', 'RGS17', 'TSPAN9', 'AHNAK', 'EXOC5', 'DGAT2', 'OLFML2B', 'COG4', 'ANK3', 'RSPO4', 'REM1', 'COX6B2', 'LAG3', 'KDELR2', 'NIPBL', 'PNRC2', 'NUMBL', 'GOT1L1', 'PLIN4', 'EMID1', 'ADAL', 'SPPL2A', 'TMBIM1', 'RAB1A', 'CCDC101', 'GLT6D1', 'HSP90AA1', 'INHBA', 'PCNAP1', 'GSPT1', 'PSAT1', 'NUP210', 'PMS2P1', 'CTXN1', 'DHFRL1', 'CACNA1F', 'N6AMT1', 'PVRL1', 'ARPC1A', 'ADGRG5', 'NGFR', 'SSBP1', 'ZBED1', 'C5ORF51', 'FAM212A', 'FZD6', 'ZNF208', 'PHLDA2', 'LIMK2', 'ALX1', 'RNASE4', 'ARHGAP24', 'C2ORF71', 'FBXO46', 'G6PC2', 'ASMTL-AS1', 'DPY19L2P4', 'DEFB116', 'STAG3L1', 'CCDC154', 'C14ORF169', 'BRICD5', 'OR52A1', 'SNORD116-15', 'UNC5A', 'VHLL', 'PANX2', 'ANGPT2', 'CORO2B', 'SPRR2G', 'LRP5', 'ZNF567', 'C9ORF139', 'DIRC2', 'GTF2IRD1', 'ELN', 'FCGR1A', 'TMEM100', 'HRK', 'PRSS48', 'CR2', 'PRSS8', 'S100PBP', 'DAPL1', 'CSTB', 'NANOS3', 'PALM', 'TEP1', 'MEX3B', 'MLST8', 'BDH2', 'MTX1', 'CD36', 'TINAG', 'PQLC2', 'MAOB', 'MAGEE1', 'ACTRT1', 'RGL4', 'LRRK1', 'PCDH20', 'SNORA41', 'KIAA0232', 'INO80B', 'ZBTB46', 'CIDECP', 'AMER1', 'SNORD116-25', 'HORMAD1', 'ZNF69', 'THEMIS2', 'PRSS37', 'C3ORF30', 'CHPT1', 'ZADH2', 'NME1-NME2', 'CLEC18C', 'CCDC103', 'SMIM5', 'OR6W1P', 'CLEC2B', 'TELO2', 'IRF6', 'HIST2H3D', 'RNF139', 'ENAH', 'C11ORF94', 'FSCN2', 'NAA35', 'MRAP', 'SHISA9', 'FKBP1B', 'CCL19', 'ARL15', 'LYPLAL1', 'EIF3IP1', 'HIST1H1T', 'SLC25A11', 'ACLY', 'AK9', 'CIZ1', 'SYN3', 'SH3D21', 'RPAP2', 'HHEX', 'LRRC31', 'PHF2', 'ZNF131', 'OR52E2', 'FANCG', 'SCARNA20', 'LINC00887', 'ABLIM3', 'INTS6', 'ADAMTS10', 'S100G', 'FAM49A', 'MUS81', 'TNIK', 'ROR2', 'WNK2', 'TM6SF2', 'SAT1', 'LCE2D', 'SLC35A1', 'SPATS2', 'RFX4', 'PRAMEF9', 'C16ORF90', 'BAZ1B', 'CXORF57', 'ZNF75A', 'CSH1', 'TRAF3IP1', 'UBA7', 'RPL23AP32', 'MSANTD2', 'CMTM2', 'POU3F3', 'SREK1IP1', 'CYP4F35P', 'GFOD2', 'PGS1', 'FAM205A', 'CYP4F2', 'SCOC', 'ACOT11', 'ACOX1', 'MSN', 'TLL2', 'EQTN', 'CHEK1', 'MARVELD3', 'KRTAP27-1', 'PCGF1', 'HJURP', 'HNF4A', 'CCDC134', 'TUBAL3', 'CDK8', 'PPM1K', 'THRSP', 'TMEM187', 'SNORA14B', 'NUP62CL', 'SNORA64', 'ZFP41', 'B4GALNT1', 'SLC10A2', 'CCDC183', 'NT5C1B', 'FKTN', 'ASPN', 'CCL22', 'BOP1', 'MYF6', 'MRPS25', 'NF2', 'YLPM1', 'OLFM1', 'CFAP58', 'APOC3', 'PXDNL', 'CAMTA1', 'TPX2', 'RPAP1', 'EMC2', 'DCLRE1C', 'TRNT1', 'TM7SF3', 'ASPHD2', 'C20ORF194', 'IFIT5', 'PRORSD1P', 'ZC3H12C', 'RAD54L', 'KCNU1', 'SAMD13', 'UBR5', 'CMKLR1', 'PNLIPRP2', 'PDGFA', 'FAM218A', 'ZNF385A', 'ATXN1', 'LRPAP1', 'CDC26', 'HBB', 'ATP11A', 'TLX3', 'CST13P', 'ACTL9', 'MAF', 'VSX1', 'APOBEC3D', 'SNORD115-35', 'GABARAPL3', 'EFCAB10', 'ZSCAN12P1', 'CSAG3', 'SEBOX', 'OR1C1', 'CNTNAP4', 'LINC00636', 'C3ORF38', 'C14ORF79', 'CYP1A1', 'AKR1C8P', 'TNRC18', 'LINC01124', 'SIGLEC14', 'ECD', 'ASCL4', 'C22ORF31', 'MICB', 'BZW1', 'TSSK2', 'NUP160', 'HSBP1L1', 'EHMT1-IT1', 'C11ORF45', 'KLHL1', 'CDK3', 'TRMT1', 'RPS7', 'OXNAD1', 'MARCH10', 'MUM1L1', 'CTU1', 'RTKN2', 'ZNF268', 'CANT1', 'LINC00669', 'PBOV1', 'ARPC3', 'NPY4R', 'S100P', 'GALNT16', 'TIAM1', 'NFATC2', 'IMPG1', 'ATP5L2', 'TMEM92', 'C1ORF115', 'ARMC1', 'CSN1S1', 'SLC25A51', 'CLNS1A', 'DPCD', 'SRSF10', 'PLSCR3', 'GPX8', 'TMEM248', 'DEFB129', 'SLC39A4', 'GREB1L', 'ALPK2', 'CD320', 'ACACB', 'RUNX2', 'EXOC7', 'RCSD1', 'SLFN5', 'WIZ', 'FABP2', 'DNAJB5', 'PPP5C', 'PLD4', 'TUBB1', 'RSAD2', 'GPATCH2L', 'ALOX15B', 'WDR55', 'AKAP1', 'LINC00341', 'TTTY8', 'ATF1', 'SLC35F4', 'NDUFA10', 'DCAF4L2', 'RSPO2', 'SNORD88B', 'SMAD2', 'NHLRC4', 'LINC00662', 'TRMT61A', 'SHANK1', 'RUFY3', 'CETN4P', 'C4ORF45', 'BARX1', 'OPTC', 'LTA4H', 'CACNG2', 'TAZ', 'UBE3C', 'LRRTM3', 'VWCE', 'DNASE2B', 'EED', 'MAP2', 'TMC3', 'SLC28A1', 'FGF14', 'PPAT', 'CD99', 'SNORD115-7', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.0910449073673394e-14 NRMSE: 1.7059571688958477e-15 MAPE: 2.111233959231058e-11 Pearson Correlation: 0.26341710801518 Spearman Correlation: 0.3007244479357598 Coefficient of Determination: -5.302014736364568 RMSE: 1.8117536411551018 NRMSE: 0.3504630225075638 MAPE: 3832.2840228377368 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 1.1693477113734816, tolerance: 0.017420030134596684 positive)
Pearson Correlation: 0.9997923759997205 Spearman Correlation: 0.9995533531285642 Coefficient of Determination: 0.9995399135696964 RMSE: 0.012205428343505777 NRMSE: 0.001908440050583344 MAPE: 18.491108211043002 Pearson Correlation: 0.29605072540213384 Spearman Correlation: 0.30485916283245434 Coefficient of Determination: -2.8319821408982477 RMSE: 1.4127690555332555 NRMSE: 0.27328401724180895 MAPE: 4128.092768995774 Predictor: RandomForests Pearson Correlation: 0.5795750650477386 Spearman Correlation: 0.5339352799993385 Coefficient of Determination: 0.2905525351011651 RMSE: 0.47928455466375774 NRMSE: 0.07494090448968145 MAPE: 245.99835035702372 Pearson Correlation: 0.44517429507581696 Spearman Correlation: 0.48007661423191506 Coefficient of Determination: 0.16159748917601302 RMSE: 0.6608238681027939 NRMSE: 0.12782882004464444 MAPE: 408.1192912222235 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['RAB30', 'LXN', 'ZNF596', 'SLC38A8', 'YPEL4', 'MT1A', 'ADAM12', 'SPATA5', 'GPR89A', 'C16ORF93', 'GJD3', 'PCDHGB4', 'SLC2A9', 'ZNF761', 'HSD17B1', 'SMIM19', 'TTLL2', 'ATP6V1G2', 'TRIM26', 'AGO2', 'CPNE2', 'SNORD50B', 'GYPA', 'SLC35F2', 'ASIC5', 'NDUFS5', 'CCDC54', 'AAMDC', 'MYCBP2', 'KRT6A', 'COX5B', 'BNIP3L', 'MTMR9LP', 'SNORA71B', 'RBM7', 'FOXL1', 'HEXIM2', 'LSM11', 'INHBA', 'CCNA1', 'GPC5', 'ZNRF2', 'TSSK2', 'OTOA', 'FGF23', 'FGF6', 'KRTAP5-8', 'SHFM1', 'SNORA61', 'MTUS1', 'TONSL', 'DENR', 'VPS25', 'DDX41', 'TAF9B', 'FAM92A1', 'HVCN1', 'GYPB', 'OR6C68', 'LRRC40', 'CHST1', 'LOC90246', 'PLN', 'ZFP90', 'GLE1', 'PITHD1', 'HEY2', 'ZNF454', 'RHBDF1', 'ME1', 'BTD', 'TTTY17A', 'SYNM', 'RAB39A', 'SECISBP2L', 'TSNAX', 'NDUFAB1', 'ABCA5', 'AWAT1', 'UPF3A', 'MORN4', 'TIMM17A', 'KIAA0556', 'TMEM138', 'PRDM13', 'HOXA13', 'FAM224B', 'CACNG2', 'TSIX', 'OLFM3', 'L1TD1', 'GSTT2', 'CCR4', 'NFKBIB', 'CCDC101', 'SMARCD3', 'CCNH', 'LSG1', 'HIST1H1T', 'HMP19', 'DMP1', 'GJA4', 'GGA1', 'TUBD1', 'ARID5A', 'SNRPE', 'KRT71', 'ZNF280D', 'RIBC1', 'PSD', 'RAB40B', 'RTTN', 'ATAD1', 'CACNA1D', 'LCE3B', 'LOC285740', 'SCN9A', 'LAMA3', 'SLC16A10', 'KMO', 'LYRM7', 'IFI30', 'ZNF324B', 'HIPK4', 'ABCC12', 'WDR81', 'ATP10D', 'AIG1', 'OBP2B', 'LRRC8E', 'CCKBR', 'DLG1', 'C16ORF86', 'KLF13', 'LINC01512', 'OR52B2', 'PAX9', 'CA11', 'DYSF', 'ATXN1L', 'CCDC186', 'MYLK4', 'MDC1', 'CCDC64', 'RPUSD1', 'GK2', 'DYRK4', 'MTX1', 'CATSPER2P1', 'ADGRG5', 'ING4', 'TIGD3', 'SPDYE7P', 'TSR2', 'PAGE1', 'ASRGL1', 'OTUD7A', 'ABI3BP', 'MMACHC', 'AP5M1', 'CUL3', 'CLDN7', 'IGFL1', 'NAPB', 'HAPLN2', 'TRIM72', 'PCDHB17P', 'PDE4DIP', 'ZNRD1', 'DDX17', 'PSMD3', 'LOC285627', 'TK2', 'COMMD2', 'GPRIN3', 'TSC22D2', 'B3GNT8', 'PMP2', 'DMBX1', 'KAAG1', 'RGS7BP', 'COA1', 'COX5A', 'RFX4', 'FBXW7', 'ACCS', 'MTIF3', 'GFOD2', 'FZD5', 'PRRC2C', 'SENP3', 'CLIP2', 'KCNC1', 'FERMT2', 'PCDHB8', 'BTK', 'KDM5D', 'SETD9', 'TIMM9', 'LCMT2', 'FTH1', 'CDK1', 'FAM183A', 'RARS2', 'CHSY1', 'OSGIN1', 'TELO2', 'UNG', 'VSTM5', 'TBC1D19', 'ARPC4', 'LOC100129550', 'NR1I3', 'GAGE8', 'DBP', 'ANKRD39', 'TMA16', 'ARMT1', 'BPIFA4P', 'KLHL24', 'KIAA1024', 'WBP2NL', 'CLPB', 'PDLIM1', 'PLEKHH1', 'SEPT10', 'AP3S2', 'PSMD13', 'LDHAL6A', 'BCL2L10', 'SSX2IP', 'PNPO', 'RAB11FIP3', 'TEC', 'ST6GALNAC1', 'N4BP2L2', 'VCAN', 'TCOF1', 'TMIGD1', 'ZNF607', 'RIC3', 'GSKIP', 'RNF139', 'LINC00654', 'TYROBP', 'CYSLTR1', 'APP', 'KIAA0930', 'CEP250', 'R3HCC1L', 'SLC27A2', 'BAHCC1', 'IPO8', 'FGF11', 'AP3B1', 'GHRL', 'OR5K4', 'GRIN2D', 'PFN4', 'MYCNOS', 'PLAGL1', 'TECPR2', 'FAM19A3', 'FDXR', 'ZBTB44', 'ZNF853', 'RPL31P11', 'INTS8', 'PNN', 'FAM83F', 'NUDT19', 'ZNF75A', 'RLTPR', 'COL22A1', 'RTN4RL2', 'EPHB3', 'CHD4', 'RND3', 'B4GALT4', 'KLF8', 'WDTC1', 'TRMT10A', 'MAP3K11', 'LY6G6D', 'TNNT2', 'WDR55', 'KIAA0100', 'HTRA3', 'WSB2', 'TCEAL8', 'TMEM108', 'GYLTL1B', 'MVK', 'CLDN22', 'GOT2', 'ZNF623', 'KLHL31', 'TNFAIP3', 'ITGAL', 'PRRG4', 'ZC3H12B', 'PRELP', 'LINC00628', 'AFAP1', 'SELPLG', 'SKIDA1', 'BSPRY', 'MST1P2', 'DKK2', 'E2F5', 'SCN2A', 'DGKG', 'STUB1', 'HIST2H3C', 'N4BP2L1', 'DOPEY1', 'TGM3', 'OCIAD2', 'GLT8D1', 'CXCR2', 'RBM26', 'FKBP15', 'FOXL2NB', 'OR12D3', 'ADAMTSL1', 'LAPTM4B', 'HIST1H4K', 'SSX4', 'STAP2', 'CCDC25', 'SUSD4', 'RAB6C', 'PPARGC1A', 'SLC13A4', 'RPL3L', 'PARP8', 'SECTM1', 'CLINT1', 'DNAJC22', 'ETS1', 'GDF3', 'KMT2B', 'SCARNA12', 'IPPK', 'TMEM104', 'VTI1A', 'CRADD', 'LINS', 'TM9SF3', 'CPXM2', 'AARD', 'LY6G5B', 'TAB3', 'TXNIP', 'KIAA1875', 'JAM2', 'RAB9B', 'TLR9', 'FAM65A', 'ZNF799', 'TMEM140', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.8543641949552435 Spearman Correlation: 0.8232941166135371 Coefficient of Determination: 0.7299381776215214 RMSE: 0.10417825764029516 NRMSE: 0.06711435505897578 MAPE: 196.95413896935716 Pearson Correlation: 0.08341917824466008 Spearman Correlation: 0.0011795658299978804 Coefficient of Determination: -12.353721475603178 RMSE: 0.6069295013092133 NRMSE: 0.7937350438883323 MAPE: 905.6956393188351 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.2949740886784262, tolerance: 0.0021620874757223526 positive)
Pearson Correlation: 0.8348843290513905 Spearman Correlation: 0.8037435269525193 Coefficient of Determination: 0.6966539292854077 RMSE: 0.11041159395623054 NRMSE: 0.07113003314944794 MAPE: 211.3706623126375 Pearson Correlation: 0.07300525414079058 Spearman Correlation: 0.015254554296188232 Coefficient of Determination: -3.3991989939075253 RMSE: 0.34835648099628236 NRMSE: 0.45557638265387085 MAPE: 670.2026390332646 Predictor: RandomForests Pearson Correlation: 0.6204266165026749 Spearman Correlation: 0.5316817235331102 Coefficient of Determination: 0.1874245206354006 RMSE: 0.1807079874003475 NRMSE: 0.11641680618479465 MAPE: 126.46289503530532 Pearson Correlation: 0.10845579893208952 Spearman Correlation: 0.09339517949101611 Coefficient of Determination: -0.07140995101728365 RMSE: 0.17191545813921788 NRMSE: 0.22482895199008418 MAPE: 137.44564796849846 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['ARF6', 'STAT3', 'MLST8', 'UBA5', 'GIMAP6', 'USP36', 'FTO', 'DHRS4-AS1', 'PHF19', 'TIPRL', 'HIST1H4H', 'TNFRSF8', 'PCDHB8', 'C16ORF13', 'PCYT1B', 'MYH8', 'NCL', 'TSPAN4', 'TPSAB1', 'PABPN1', 'NTN4', 'OR5K4', 'NRTN', 'LRTOMT', 'SLC6A4', 'CFAP57', 'ZNF763', 'ELSPBP1', 'GDF2', 'LXN', 'CBR4', 'CSF1', 'MIR100HG', 'TDP1', 'GOLGA6L9', 'SVOPL', 'SPRTN', 'TMEM219', 'SEPT12', 'G6PC3', 'ANKRD34B', 'SERGEF', 'ZNF622', 'RPL23AP64', 'EBF2', 'ENO3', 'FBLN2', 'LINGO3', 'USP43', 'DLGAP1', 'CCDC6', 'CLK2P1', 'MBNL3', 'UBE2QL1', 'CTTNBP2NL', 'AHCYL1', 'SPATA24', 'GDF9', 'GATA6', 'MCM4', 'TTI2', 'CASP1', 'ILF2', 'GMPS', 'PLEKHB1', 'ATG4D', 'RGS22', 'PHKB', 'ACKR2', 'KCNK12', 'RRN3', 'ARMC12', 'UBE4A', 'WRNIP1', 'HLA-DQA2', 'SPAG7', 'ATP1A3', 'CYP3A43', 'TNS1', 'ZNF592', 'ZNF587', 'GCLC', 'C20ORF27', 'HRASLS', 'TMEM87B', 'PGM5-AS1', 'MBOAT4', 'KRTAP3-2', 'TGM1', 'MDN1', 'LINC00032', 'SMARCAD1', 'TTTY6', 'SUCLG1', 'ZBTB21', 'TEX37', 'CSAG1', 'FAM110B', 'ANG', 'FEN1', 'MRC2', 'HMSD', 'CAMK1', 'LYPD5', 'CTDSPL2', 'VWCE', 'RBM24', 'RETN', 'SNORD114-25', 'HOXB6', 'DRAXIN', 'EGR2', 'MESP2', 'ZNF287', 'SCD5', 'ASPA', 'PDZRN4', 'NRARP', 'CRYBB1', 'ARMCX1', 'MARK1', 'GOLGA8B', 'NTSR1', 'PTGES3', 'APOA1BP', 'PPM1H', 'RBMS1', 'BAG2', 'ACMSD', 'POLH', 'PANK3', 'FICD', 'RHCE', 'NAT1', 'FIGF', 'FLG2', 'LOC200726', 'SNORA28', 'CROCC', 'RBPMS', 'ZFP92', 'ELAC2', 'BCAS4', 'RNASEH2C', 'PPM1E', 'OR8H2', 'NOL11', 'CERCAM', 'ZBTB40', 'TMEM160', 'PRSS3P2', 'CCDC127', 'HBBP1', 'RAD18', 'ZNF137P', 'EXOC2', 'PSMG1', 'WASH3P', 'PLIN5', 'CSNK1G3', 'BUB1', 'ARRB1', 'C7ORF13', 'ALS2CR12', 'DYNLRB1', 'DNASE1L3', 'B4GALT1', 'UGT2A3', 'AGFG2', 'ERRFI1', 'SNORD116-24', 'TAAR5', 'ASB7', 'PRDM1', 'RSF1', 'ZFYVE9', 'IWS1', 'MSMB', 'MTMR11', 'TERT', 'TRIM16', 'SP140', 'SLC16A6', 'EZR', 'HAVCR2', 'ADAMTS9', 'PRR22', 'STK11', 'ARHGAP39', 'KRT20', 'ZNF48', 'IGF1', 'TAGAP', 'VENTX', 'CPSF7', 'ATRN', 'SERPINA5', 'PLCD1', 'CDRT15P1', 'LOC256880', 'CCDC43', 'SNORA21', 'BACH2', 'IFNAR2', 'SNX9', 'MRPL45', 'ZBED4', 'RANGRF', 'HMGCL', 'CHCHD3', 'OR5AN1', 'ATP6V1C2', 'MCM3AP', 'PASD1', 'KLF8', 'LRRC1', 'GPR176', 'PLK3', 'CFAP221', 'TBX2', 'NT5DC1', 'ITGBL1', 'ECH1', 'SLC25A43', 'SPRR3', 'NFKBID', 'OR10A5', 'AOC1', 'SEC24B', 'PABPC1P2', 'ETV5', 'CCDC112', 'EDC4', 'TRPV2', 'SH3PXD2A', 'LSS', 'NAA10', 'SSH1', 'LOC284441', 'OR3A4P', 'OTUD3', 'LRRC34', 'DNAJC16', 'MUC5B', 'PPL', 'SLC25A44', 'PCBP3', 'BEND3P3', 'NR1I3', 'H2AFX', 'CLIC6', 'SPATA32', 'IL17RA', 'GPRC6A', 'HECW1', 'TAS2R40', 'NGDN', 'OR2H2', 'GP6', 'C1ORF158', 'GDF7', 'PSG8', 'MAP1S', 'IL1RL1', 'C16ORF90', 'OSBPL10', 'RAC2', 'VCX3A', 'PRO0628', 'EREG', 'LRRC41', 'GTF2H2', 'CXCL11', 'CCT6P1', 'FGFR4', 'LTBR', 'BUD13', 'DLX5', 'BPNT1', 'OSBPL1A', 'EPN2', 'DLX3', 'RFPL4B', 'ZCCHC12', 'ZMYM2', 'KTN1-AS1', 'CUL3', 'DHX36', 'CCND1', 'HINT1', 'MYL12B', 'HTR5A', 'CHRM5', 'CLN3', 'FOCAD', 'COQ10A', 'CTSE', 'HSPA2', 'EXOC5', 'RHBDL3', 'LINC00593', 'BRF1', 'TMEM200C', 'NRIP1', 'PAN3', 'SLC52A3', 'FSHR', 'B3GALNT1', 'ZW10', 'COPS3', 'PEX11G', 'SUGT1', 'ANXA2P3', 'WRAP53', 'TCL1B', 'HIST1H3J', 'HDGFRP2', 'FRRS1L', 'MNAT1', 'PDP1', 'SNORA69', 'GPAT2', 'TMPRSS4', 'ZNF18', 'C1ORF21', 'TYK2', 'DIRAS1', 'EEF2', 'CABLES1', 'CFAP70', 'POU4F1', 'PLAC9', 'CCRN4L', 'RNF24', 'ZNF205-AS1', 'OR5W2', 'COX4I2', 'NAP1L1', 'C17ORF53', 'OR4N4', 'ZNF25', 'ADAM22', 'KCTD16', 'MEGF11', 'SNORD49A', 'RPL13P5', 'UXS1', 'NSFL1C', 'GFI1B', 'LETM2', 'LINC00923', 'C4ORF45', 'PREX1', 'EVA1A', 'PLB1', 'TEPP', 'FAM222B', 'ESYT2', 'ZNF782', 'CHRNA5', 'SSTR4', 'ARPC3', 'FABP5', 'GIMAP8', 'SPOPL', 'CLTB', 'C9', 'RNF222', 'FAM134A', 'PRMT6', 'SCN8A', 'SRMS', 'ZEB1', 'LOC81691', 'KHDRBS2', 'DNAJB8', 'AKAP3', 'RAMP2', 'CEACAM16', 'ZNF385D', 'BDH1', 'ERLEC1', 'CT83', 'GAPDH', 'SUGP1', 'KRTAP5-8', 'HCG27', 'OMD', 'PTPN1', 'TBC1D8B', 'ZNF235', 'CLDN1', 'TRHDE', 'KRTAP11-1', 'FEZF2', 'TUBA4B', 'CKMT1A', 'PUM2', 'SNORD43', 'TAS2R10', 'HNRNPL', 'SDHA', 'SMIM10L2A', 'BTG1', 'LAMTOR3', 'MAP3K7CL', 'ZDHHC6', 'HIST1H4F', 'GSTA2', 'NEUROG3', 'FLJ44635', 'NDC1', 'LIPE', 'PDK1', 'ABHD14A', 'IRX6', 'UBXN11', 'ZNF134', 'RASL10A', 'PLA2G2F', 'KDM3B', 'CENPI', 'FAM185A', 'PKHD1', 'APH1B', 'UBAP2', 'DHX58', 'SNORA24', 'ZNF594', 'AHSA2', 'B3GALT5-AS1', 'HOXB7', 'VRK3', 'WNT7B', 'GSKIP', 'ZNF780A', 'KCTD4', 'HBG2', 'GAP43', 'ZNF418', 'BPHL', 'C11ORF73', 'TMEM26', 'SON', 'TJP1', 'HYAL1', 'IPO5', 'EML3', 'ANAPC1', 'WBP2NL', 'PLEKHO1', 'LIMD2', 'OR4K5', 'GNAI1', 'STAM2', 'ZSWIM6', 'FABP7', 'NLE1', 'SERPINA10', 'PCAT18', 'DMRT1', 'SLC2A1', 'WT1-AS', 'RTL1', 'CLEC3B', 'AKAP1', 'FAM169A', 'SPINK4', 'USP32P2', 'FBXO47', 'TMEM175', 'AP5S1', 'NKX2-4', 'ADCK5', 'TROVE2', 'CACNA1F', 'DUSP5', 'ZNF428', 'XKRY2', 'HMHB1', 'ANKRD32', 'FANCI', 'NTN5', 'FBXO9', 'DIRC1', 'TBC1D10B', 'EARS2', 'INSL4', 'GPR142', 'LMBR1', 'FERD3L', 'TAF9', 'TFE3', 'TYW5', 'MRPS31', 'FASTKD1', 'CCL27', 'PROX1', 'MYT1', 'B3GNT7', 'ZDHHC22', 'PIK3R1', 'ZNF562', 'CACNA1I', 'CAPG', 'CEP97', 'ACADS', 'CAMK2A', 'PIKFYVE', 'TCEAL6', 'PCDHA9', 'LOC285627', 'S1PR2', 'PSPN', 'GJB1', 'POLE4', 'GPR61', 'FLYWCH1', 'HPYR1', 'WAPAL', 'AGO3', 'PRSS48', 'LIN37', 'EMB', 'SGCZ', 'TRIM68', 'BCR', 'RER1', 'HIST1H3E', 'SPEF2', 'NYNRIN', 'LRSAM1', 'FAM168A', 'JPH4', 'LSM8', 'TMEM8B', 'IGFBP5', 'RHOD', 'DDX27', 'NDUFB5', 'HLA-DOA', 'LOC100287704', 'OR6Y1', 'CLIP4', 'POLDIP3', 'DCAF16', 'ZUFSP', 'TNP1', 'SURF6', 'SRCIN1', 'PCNXL3', 'ATF1', 'CCSER2', 'CALML5', 'OSGEPL1', 'COL23A1', 'SNORD116-4', 'EPHB2', 'DHRSX', 'TTC37', 'PFN1', 'RASGRF1', 'EGFL6', 'FOXE1', 'SCRIB', 'HP', 'SYP', 'KCNB1', 'ERP29', 'EDNRB', 'ZNF488', 'TEFM', 'CDKN2D', 'RBM34', 'IL2RA', 'TEKT4P2', 'SDHC', 'ITGB3BP', 'DEFB134', 'KRT25', 'GIMAP1', 'LINC01119', 'TBC1D23', 'PRKG1', 'SNX29P2', 'CTRC', 'RIN3', 'LINC00628', 'LAMC1', 'LRIG1', 'PPAPDC3', 'LOC401127', 'CT55', 'SPEF1', 'DPYSL4', 'C6ORF25', 'NXPE1', 'TCTEX1D1', 'CRIP2', 'RBMS3', 'SLC7A13', 'TRPV3', 'SLC35B1', 'SNORD65', 'EVC', 'B4GALNT3', 'TPR', 'TSPAN17', 'PIWIL3', 'ANKRD9', 'SNORD35A', 'MYH2', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.2096528191344156e-13 NRMSE: 8.173086550213684e-14 MAPE: 2.893174296207929e-10 Pearson Correlation: 0.20058016142674912 Spearman Correlation: 0.14903178343869625 Coefficient of Determination: -79.27835195993383 RMSE: 5.429197500896122 NRMSE: 1.3661451651684966 MAPE: 6190.481100710636 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 6.433374150607323, tolerance: 0.024854257731250624 positive)
Pearson Correlation: 0.9881570154260009 Spearman Correlation: 0.9834916357166301 Coefficient of Determination: 0.9762639851102645 RMSE: 0.1047160287811073 NRMSE: 0.02666497638998429 MAPE: 94.97485778004545 Pearson Correlation: 0.20403123583066893 Spearman Correlation: 0.18999488771680448 Coefficient of Determination: -13.343860462744573 RMSE: 2.2949299949762683 NRMSE: 0.5774716275323389 MAPE: 2604.1012675247566 Predictor: RandomForests Pearson Correlation: 0.7026939889576465 Spearman Correlation: 0.6271367152992676 Coefficient of Determination: 0.49008994231888026 RMSE: 0.4853511355541539 NRMSE: 0.12359021556725164 MAPE: 210.74169172210705 Pearson Correlation: 0.38449523487533577 Spearman Correlation: 0.35848634482443226 Coefficient of Determination: -0.03202030902711983 RMSE: 0.6155743827671091 NRMSE: 0.1548965508585866 MAPE: 489.4249286238427 Protein: TP53 x_train_column_count: 1002 x_train columns: ['PAXIP1', 'LOC644936', 'SH3BGR', 'KRTAP11-1', 'LGSN', 'SMAD9', 'XKR5', 'ATP6AP2', 'POLR2H', 'ZAP70', 'AGAP6', 'SHISA6', 'ZNF554', 'SPDYE1', 'PDHA2', 'LOC407835', 'SPOCK1', 'EFCAB8', 'ARSE', 'C15ORF56', 'GALR3', 'FAM43B', 'PPIB', 'ZPLD1', 'TMEM143', 'CHST8', 'DNALI1', 'SPIC', 'ESRRB', 'CDKN2C', 'KHDRBS2', 'GGH', 'SPAG17', 'NFAT5', 'C21ORF2', 'HP', 'KRTDAP', 'SMAD2', 'TRIM55', 'NOL6', 'SLC4A11', 'BST1', 'NAA11', 'FAM71A', 'PTRF', 'ATP4A', 'PLCD1', 'DENND2C', 'ABHD15', 'MGC15885', 'DNAJB1', 'EDN3', 'CMKLR1', 'AMMECR1L', 'MAN2C1', 'BAP1', 'GTF2H4', 'PRSS53', 'TIA1', 'CYB5D1', 'IGF2', 'SPICE1', 'ZC3H7A', 'SCNN1D', 'HTATIP2', 'PARN', 'ZFAND1', 'ANKRD28', 'LOC646813', 'RTN4', 'MPZL1', 'LOC284578', 'RNF135', 'IL5', 'LINC00472', 'GAMT', 'HS6ST3', 'SEC22C', 'RUFY2', 'SNAR-E', 'LHFPL2', 'SNORD45C', 'MLH3', 'GMFG', 'HSPA1A', 'ADD2', 'TMEM200B', 'UCP2', 'ID2', 'LOC440173', 'BCL2A1', 'PLOD3', 'HIGD2A', 'DPT', 'NPFFR2', 'KANSL2', 'CCDC107', 'MLLT3', 'SLC22A2', 'EIF3B', 'FZD3', 'PHOSPHO2', 'ZFYVE27', 'GATAD2B', 'PIP5K1C', 'MTG2', 'HAPLN2', 'NPTX1', 'FUNDC2P2', 'TOLLIP', 'S100A5', 'ZYG11A', 'ZNF619', 'ZNF546', 'C10ORF90', 'OR2T33', 'PKD1L1', 'TACC1', 'S100A7L2', 'HEATR1', 'TTC39A', 'SNORD65', 'RTP3', 'G6PC2', 'VAT1', 'FAM184A', 'FRY', 'UGGT2', 'FGF21', 'ALPK3', 'ZNF808', 'CS', 'SPP1', 'SNORA79', 'PID1', 'CLCN7', 'C17ORF70', 'CHRM4', 'KLHL40', 'FAHD2CP', 'PLAC1', 'DDX31', 'PLEKHS1', 'C19ORF38', 'GPR151', 'PPP1R15B', 'DYNLT3', 'RASGRF2', 'FLT4', 'HSPA9', 'FAM178B', 'SRRM4', 'RPS15AP10', 'ADAM12', 'LY6H', 'SPIN2B', 'OR10A6', 'CD40', 'MPV17', 'CDKAL1', 'CWH43', 'H2AFZ', 'KIAA0907', 'ANXA11', 'MSL2', 'TEX29', 'ZNF718', 'CHCHD6', 'EEF1DP3', 'MAPK1', 'HMGXB3', 'KRTAP10-4', 'ARMC5', 'GTF2IRD1', 'SMC5', 'ZBTB26', 'GLUD1', 'GCSAML', 'IVL', 'PQLC2', 'ITPK1-AS1', 'CD7', 'SOX18', 'RLN1', 'FN3K', 'CKMT1A', 'SNORA70', 'TMOD4', 'TRO', 'BPIFB3', 'C12ORF49', 'C19ORF40', 'ACTL6B', 'GALNT10', 'FLVCR1', 'OR4K17', 'ALPPL2', 'TMEM50B', 'GPR176', 'HMGA1', 'GPR161', 'ATXN7L3', 'ZNF605', 'FMO4', 'WNT3A', 'EBNA1BP2', 'SRA1', 'WDYHV1', 'ANKRD26P1', 'XDH', 'FAM209A', 'GRK1', 'ISPD', 'HOXC6', 'CACNA1D', 'FAM111B', 'SPATA31A6', 'SLC35D2', 'NSMCE2', 'CORO6', 'THUMPD3-AS1', 'BAK1', 'RGS7BP', 'DHX35', 'DPY19L1', 'RS1', 'C11ORF42', 'PNRC2', 'NSRP1', 'RPS6', 'SPOP', 'RNF151', 'WNT8A', 'LMCD1', 'TRIM44', 'MORF4', 'KDSR', 'FOXC2', 'ASB2', 'AP3M1', 'OR2H2', 'GABARAP', 'CWC22', 'OLFM3', 'ZNF558', 'LIX1', 'KCNJ4', 'CEBPE', 'OR10G3', 'NETO1', 'BTG2', 'LIPM', 'IGFL4', 'TPTEP1', 'MAP1LC3B', 'EIF5A2', 'TERT', 'AKT3', 'OPRK1', 'CLDN7', 'MID2', 'ADGRF4', 'HIPK3', 'TM4SF20', 'OR5H15', 'ATAD5', 'RRS1', 'TBCE', 'RTEL1', 'COL9A2', 'TMEM216', 'TMPRSS3', 'APH1A', 'RASA2', 'SPSB2', 'TRIM75P', 'ITGAX', 'OGDHL', 'SECTM1', 'USP1', 'ASAP1', 'SNORD119', 'TTLL11', 'TM7SF3', 'CD72', 'SLC35F6', 'GPR135', 'SNORD115-39', 'LGALS3BP', 'CACYBP', 'OR1N2', 'ZNF844', 'ELAVL4', 'ZBTB43', 'SNORD29', 'PUSL1', 'WDR13', 'FAM78B', 'FBLIM1', 'BAHD1', 'TMEM182', 'APCDD1L', 'ITGB1BP1', 'SEPN1', 'LUC7L', 'TRIO', 'LINC01184', 'NEO1', 'MRPL40', 'TMEM8C', 'KMT2D', 'ZNF439', 'TBL1X', 'MON1B', 'SLC25A53', 'LINC00667', 'MCF2', 'XAGE3', 'CDKN2AIP', 'TEDDM1', 'DNAL4', 'ALDH9A1', 'RANBP9', 'AIG1', 'CAMTA2', 'SLC22A13', 'P3H4', 'OR10H1', 'TMEM41B', 'BARX2', 'TRPM1', 'WDHD1', 'DKK1', 'LOC284023', 'FZD8', 'TTR', 'RPA1', 'ACBD3', 'PDIA3P1', 'POU3F2', 'KCNH8', 'KLHL7', 'SUOX', 'CEL', 'SNAPC3', 'JAZF1', 'PLRG1', 'CYP4F3', 'ENDOD1', 'FBXO24', 'OR8U1', 'EXOSC4', 'CDKL1', 'SCARNA4', 'UBE2J2', 'FEZF2', 'SYT12', 'EBF4', 'NDUFAF5', 'ALKBH7', 'CDH17', 'OR2J3', 'FAM110C', 'LRRC59', 'SPTSSA', 'TSHB', 'CDK20', 'CABP4', 'SLC25A40', 'FBXO27', 'RGS7', 'ZNF233', 'GOPC', 'PRPF4', 'AKR1B15', 'AMPH', 'CTSL', 'SPDYE4', 'RFC3', 'SNORD78', 'MANSC1', 'LOC153910', 'NTN5', 'PIAS1', 'OR5K4', 'TMEM31', 'CBS', 'SND1-IT1', 'STON2', 'RPL30', 'FAM175A', 'SNORD37', 'DOLPP1', 'SDHAF2', 'NIPAL4', 'TMEM187', 'DLG2', 'VAX2', 'SLC52A1', 'SLC19A3', 'INCENP', 'CDH20', 'ERO1L', 'ZNF217', 'MAML2', 'SYNPO2L', 'ST8SIA4', 'SEC24A', 'TMEM38B', 'POP1', 'IRGQ', 'CNNM4', 'MMP13', 'NMT2', 'SPRR2G', 'CSRNP1', 'KPNA2', 'DDO', 'WFDC6', 'KIAA0513', 'C15ORF57', 'MALL', 'LINC00167', 'TRIM5', 'ZNF530', 'ABCA3', 'C1QTNF2', 'MUS81', 'OR2B3', 'PTCH2', 'SLC25A32', 'SPINK1', 'DNAH12', 'CDAN1', 'ALS2CR11', 'SALL1', 'ANKRD13A', 'AQP6', 'LRP10', 'ANAPC15', 'SIPA1', 'LAMC1', 'HNRNPU-AS1', 'SNORA34', 'MTMR6', 'MSMO1', 'EPHX4', 'MST1R', 'KIAA1210', 'MYLIP', 'SLX4', 'ZNF644', 'RNASEH2A', 'P4HA3', 'IL32', 'SNX1', 'C2CD4C', 'KAT6B', 'RHBDL2', 'MAFF', 'C9ORF117', 'STMN2', 'MRTO4', 'GYS2', 'NCK1', 'EBPL', 'LOC440461', 'SSR3', 'ARSF', 'DCAF6', 'HEXIM2', 'HES2', 'ELSPBP1', 'NDUFAF1', 'CD40LG', 'FAM210A', 'LARP6', 'TUBB', 'TMCO3', 'VWA8', 'PTPN4', 'ERC2', 'MIR99AHG', 'SMPDL3A', 'FAM160A2', 'EXOC3L2', 'CREG2', 'ANKFN1', 'ESCO2', 'FXYD5', 'RBM12', 'CDHR5', 'FAM106CP', 'HIST2H3C', 'STEAP2', 'GNPDA2', 'LLGL1', 'IL22RA1', 'DAPK2', 'NDUFB2-AS1', 'KIAA0754', 'SLC44A2', 'DUOX2', 'DMP1', 'PLN', 'PCDHGA3', 'SUPT3H', 'OR2T5', 'UPK3B', 'FUT10', 'PDIA6', 'LBX2', 'TTPA', 'DHX34', 'HACE1', 'ZNF503', 'NUTM2A-AS1', 'PELI1', 'OR4K15', 'IRF2', 'SLC22A3', 'CNGA2', 'SARAF', 'AARS', 'LEPROTL1', 'GLYATL3', 'CLN6', 'BCL9', 'FRZB', 'HOXA13', 'SYK', 'UQCRB', 'SPRR1B', 'VPS35', 'MSN', 'PDLIM5', 'TANGO6', 'C6ORF223', 'FCGR1A', 'ZNF140', 'LINC01566', 'NDST3', 'TMEM179', 'LOC100130093', 'BRDT', 'SPNS1', 'LOC151174', 'HIST1H4G', 'RNPS1', 'TAP2', 'NEMF', 'GCM1', 'SPAG5', 'YAP1', 'CMTM3', 'APOPT1', 'ZHX2', 'RASEF', 'PARPBP', 'CKAP2', 'GPT2', 'TRIP4', 'ATG7', 'AP2A1', 'MTHFR', 'TRIM35', 'PTPRZ1', 'USP44', 'PITX2', 'NUP107', 'NUDT18', 'ITFG2', 'FOXF2', 'ALDH3B2', 'C2CD2L', 'C17ORF102', 'BOLA2', 'NAPSA', 'KIAA1958', 'ADRA2A', 'PLEKHA7', 'CSN2', 'STAT5B', 'C1ORF186', 'NAA40', 'RAB24', 'OR1B1', 'LRRC47', 'QKI', 'ZNF768', 'POLR2D', 'RALBP1', 'ERLIN2', 'JADE1', 'CYGB', 'CAGE1', 'COL5A3', 'LGMN', 'KCNK7', 'SNORD36B', 'TRAPPC4', 'LINC01558', 'EVC', 'XRRA1', 'GTSF1L', 'PGA4', 'RBP2', 'GALR1', 'ST6GAL1', 'MRPS34', 'CCT6B', 'DPF2', 'NLE1', 'ARHGAP39', 'FECH', 'GTF3C3', 'FGF1', 'ITM2C', 'PNMAL1', 'TMEM30A', 'SENP8', 'ARHGEF15', 'CLDN20', 'KLF1', 'UQCR11', 'NPY1R', 'CACNA2D4', 'ZNF737', 'C16ORF70', 'EIF6', 'SELM', 'ARHGAP4', 'CHAC2', 'CCDC62', 'TANC2', 'NCOR1P1', 'CFAP47', 'LRRC75B', 'GFPT1', 'CABP5', 'CCL17', 'PCDHA13', 'HPSE', 'NDST2', 'RASSF3', 'PAPOLG', 'BEND7', 'HIST2H2BF', 'SSBP2', 'PDCL3', 'QSOX2', 'LOC400043', 'RBMY1J', 'AATK-AS1', 'GPR50', 'TMTC1', 'RBBP4', 'SDCBP', 'NXPE1', 'DMRTC1', 'LOC400927', 'GRIP1', 'PDGFC', 'ONECUT1', 'EXTL3', 'SNORD115-11', 'UBE2A', 'SOX10', 'OR10R2', 'BDP1', 'FDPS', 'ADCY5', 'TXNDC8', 'SHOC2', 'TIFA', 'COASY', 'TFEC', 'FBXO16', 'C1ORF106', 'ZNF568', 'TCEAL8', 'OVCA2', 'MSTO1', 'ICAM1', 'EPHA8', 'FANCA', 'SYT9', 'CAPN9', 'TSR3', 'MID1', 'UNC80', 'CMA1', 'MAGEE1', 'DNAH10', 'HIST1H3F', 'RNF141', 'CNOT1', 'GLIS3', 'FAM107B', 'TOP2A', 'MUT', 'LINC00284', 'MYEF2', 'MORN2', 'REXO4', 'OR8K1', 'TNRC6A', 'KRTAP5-9', 'H3F3B', 'PRCP', 'EME2', 'PPARD', 'ANKRD39', 'ARSA', 'LRRC17', 'SPAM1', 'PCMTD2', 'FRS2', 'LOC143666', 'GPATCH3', 'SNORD114-14', 'TXNRD1', 'ZNF131', 'PGRMC1', 'ZNF273', 'PRAMEF8', 'ZNRF2P1', 'DNAJC3', 'ZNF252P', 'LRRC28', 'ZNF674', 'SLC24A5', 'ZNF846', 'CERS5', 'WASF1', 'CLRN2', 'DUS4L', 'NTRK3', 'SNORD12', 'CLMN', 'ATP13A1', 'CACNG1', 'PLEK2', 'LINC00620', 'CPXCR1', 'FAM118A', 'PABPC4', 'CYB5A', 'ARL2', 'PIP4K2B', 'EDNRB', 'GPR157', 'OR4S1', 'ZNF823', 'S100P', 'FMR1-AS1', 'MSRB2', 'RHBDL3', 'APOH', 'CAMK4', 'SCARB2', 'C11ORF96', 'EIF2AK1', 'HRASLS', 'KDM2A', 'RECK', 'HOMER1', 'CNIH1', 'JRK', 'PPP5C', 'ZNF512B', 'HESX1', 'CCDC167', 'FAR2P1', 'LGALS13', 'ATP13A2', 'MTCH1', 'TMEM190', 'SAMD10', 'TMEM176A', 'TMEM39A', 'C6ORF1', 'PARG', 'ORC4', 'FRS3', 'FAM163B', 'HOGA1', 'WWC2-AS2', 'CYYR1', 'ADIRF', 'EMC7', 'CYP2C8', 'LOC644172', 'CATSPER1', 'SUPT20HL2', 'ETAA1', 'RPS19BP1', 'PMEL', 'TRAP1', 'TCAF2', 'PHF10', 'SORCS3', 'CMTM4', 'RNGTT', 'ID1', 'HNF1B', 'PPP1R9B', 'DNAJC30', 'CXCR2P1', 'ZNF526', 'DHX15', 'MS4A12', 'AMY2A', 'NUDT16P1', 'RNF187', 'MAP3K11', 'TMED9', 'SNORD52', 'ARHGAP29', 'LPAR1', 'RC3H2', 'MYOM1', 'OR51B5', 'WWP2', 'C2ORF73', 'SIPA1L3', 'CPSF4', 'RPL28', 'FDCSP', 'USP3', 'SPP2', 'FAM102A', 'FKBP9', 'PPAP2B', 'SP140L', 'EPC1', 'AP2M1', 'C11ORF53', 'HSPH1', 'FAM117A', 'DNAAF2', 'ITLN2', 'ARL5C', 'SNORD27', 'SPACA4', 'HAUS7', 'SNORA24', 'XKRX', 'POU2F1', 'CXORF56', 'TAB3', 'RFX7', 'UFD1L', 'TOR2A', 'FAM217B', 'ZNF221', 'MAS1L', 'LSMEM2', 'BRIX1', 'RPS27', 'SSTR4', 'PWP2', 'RAI2', 'GPR153', 'C11ORF1', 'AKIRIN2', 'ZNF518B', 'SNORD116-26', 'PAX8', 'TOP2B', 'ZNF773', 'FEM1C', 'TXN', 'C14ORF169', 'PALM2', 'HPR', 'PQLC3', 'KLF10', 'ALAS1', 'CSHL1', 'DKFZP779M0652', 'UCN3', 'LILRA2', 'PRKCSH', 'TP53RK', 'UPP2', 'EXOC5', 'SMIM1', 'RAP2A', 'OR13C8', 'FAM53B', 'EIF2B3', 'SUB1', 'SPATA33', 'PRKRA', 'FLJ41941', 'PWRN1', 'PCDHB19P', 'KRT75', 'PSG3', 'KDM5A', 'RNF168', 'FAM27L', 'E2F7', 'LOC100133050', 'WDR91', 'RCC1', 'DSCC1', 'OR52B4', 'PDLIM2', 'NEDD9', 'BTNL2', 'TRPV5', 'NKG7', 'DCK', 'CTHRC1', 'EIF3IP1', 'HOXA4', 'SAMD4A', 'POTEC', 'MGC16275', 'HPSE2', 'DEFB122', 'KATNAL2', 'KRTAP10-10', 'FOXB2', 'ISCA1P1', 'SUGT1', 'DHDDS', 'VAC14', 'MDFI', 'TAF1', 'RANBP6', 'SNORD63', 'CD93', 'RGS13', 'SLC35F4', 'SYT14', 'BGN', 'RSU1P2', 'ECE2', 'FGG', 'DACH2', 'CCDC57', 'ADA', 'GTSE1', 'MLF1', 'FBXL13', 'HACD3', 'SDHC', 'NOXO1', 'MAP3K10', 'MIOS', 'CHST2', 'SAMD4B', 'LGALS12', 'GXYLT2', 'TDRKH', 'HIST3H3', 'PRAMEF9', 'PRR7', 'GTF2B', 'TSKU', 'CLLU1OS', 'KLHL6', 'PATZ1', 'LINC00596', 'NR2F1-AS1', 'CTNNB1', 'ZNF707', 'HAGH', 'PLA2G2C', 'NOBOX', 'DDIT4', 'ABHD6', 'OR6C2', 'SP2', 'ICAM5', 'RABGEF1', 'HFE', 'NCAPD3', 'MVB12B', 'C5ORF60', 'WDR43', 'RAMP1', 'PRRT2', 'MBNL3', 'GATA6', 'OR6T1', 'MTM1', 'ARRDC2', 'NCKAP1', 'SHISA3', 'DUSP5P1', 'ARPP21', 'OXGR1', 'COX11', 'CLEC4D', 'STBD1', 'FAM183B', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 9.047678669610361e-15 NRMSE: 2.3010958238028336e-15 MAPE: 1.1993664772039028e-11 Pearson Correlation: 0.14717842052966118 Spearman Correlation: 0.13129590144515518 Coefficient of Determination: -3.137746141194599 RMSE: 1.074325152936446 NRMSE: 0.2877528198570901 MAPE: 750.1464786296882 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.5023073784458539, tolerance: 0.009662504276089433 positive)
Pearson Correlation: 0.9998609029518322 Spearman Correlation: 0.9996840489694813 Coefficient of Determination: 0.9996976711530338 RMSE: 0.007368744624052878 NRMSE: 0.0018740925822256106 MAPE: 24.04999322391456 Pearson Correlation: 0.19148192394877817 Spearman Correlation: 0.19168069427299594 Coefficient of Determination: -2.523745110286222 RMSE: 0.9914163249353328 NRMSE: 0.2655460894429712 MAPE: 547.5812265387932 Predictor: RandomForests Pearson Correlation: 0.6730491655802952 Spearman Correlation: 0.6126507457854015 Coefficient of Determination: 0.3685315110298121 RMSE: 0.3367670196969701 NRMSE: 0.08564994524198737 MAPE: 651.885590135498 Pearson Correlation: 0.5553845630576946 Spearman Correlation: 0.49335527874412405 Coefficient of Determination: 0.23866065461426778 RMSE: 0.46083235143122625 NRMSE: 0.12343172664556751 MAPE: 151.51425384733272 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['STAG3L2', 'KRTAP5-9', 'SNORD115-22', 'GPR39', 'DLK1', 'COBLL1', 'SLCO4C1', 'ELF2', 'HSD17B10', 'SAT1', 'HBA1', 'DDX50', 'RAD54L', 'FGF2', 'FCRL1', 'BLNK', 'STK31', 'SP7', 'NBEAL1', 'LCOR', 'RAP2C', 'MSL3', 'NDUFA13', 'FHOD1', 'LOC284441', 'SMIM24', 'CCDC71L', 'FOXO4', 'SNORD116-11', 'AMER2', 'TTC27', 'SYNE3', 'CCDC115', 'GSTA5', 'CFHR5', 'LRWD1', 'MRPL52', 'FXYD2', 'AKTIP', 'EEF1A1P9', 'TMEM132E', 'SSR2', 'POU3F2', 'MBTPS2', 'SNRNP27', 'ZNF473', 'SLC4A10', 'MED4', 'CLINT1', 'LRRC18', 'PPARD', 'CRAT', 'ZCCHC14', 'DNAJC22', 'PRH2', 'SMARCAL1', 'ME3', 'PSMC1', 'CELF2', 'FAM135B', 'EGFL7', 'MTIF3', 'FAM65C', 'GBGT1', 'OR9Q1', 'PSMB10', 'TNFRSF1A', 'NYAP1', 'SLC2A4RG', 'IL25', 'TRIM42', 'SRSF4', 'UQCRH', 'FCER1G', 'CYB5B', 'ADCY10P1', 'SS18', 'C17ORF58', 'C16ORF87', 'OR13H1', 'STX4', 'CCT8', 'FAM83A-AS1', 'DEFB131', 'OR14I1', 'PACS2', 'ST6GAL1', 'ANKRD54', 'GDAP2', 'IKZF4', 'CD248', 'SUPT3H', 'TUBA4B', 'SNORA27', 'MYEOV2', 'TTI2', 'REEP1', 'NT5C3A', 'COX6A1', 'C12ORF50', 'TMEM55A', 'ATXN3L', 'DCAF12L2', 'SLC45A2', 'ZNF267', 'SNRK', 'GJA8', 'FAM57A', 'USH1G', 'MAZ', 'TRIM24', 'FGD2', 'STAMBP', 'VAMP4', 'PDE8A', 'SLC22A9', 'DHFR', 'ITPK1-AS1', 'ALX1', 'PSME4', 'USP32', 'TMEM40', 'USP17L9P', 'MYOF', 'TUBG1', 'JAGN1', 'ROPN1', 'CCDC163P', 'TBL1Y', 'KLRF1', 'DENND6A', 'DIAPH2', 'EED', 'ZNF575', 'GCLC', 'GLA', 'LSMEM2', 'KIR2DL4', 'LINC00895', 'ISL2', 'NUDT21', 'CHST14', 'PPFIA3', 'VAMP7', 'IDH3A', 'C9', 'PDE6A', 'SNORD115-25', 'DQX1', 'HNRNPU', 'KAAG1', 'UBA6', 'FOXRED2', 'PNN', 'BCAM', 'KLHDC2', 'PLEK', 'PIP4K2B', 'KCND3', 'SCARNA17', 'MMADHC', 'MT1X', 'KRTAP10-8', 'DUSP23', 'ZNF557', 'LILRA2', 'FOXD4L6', 'AMIGO1', 'ADRB3', 'PARD6G-AS1', 'TNFSF10', 'PKD2L1', 'ETFDH', 'PEX26', 'CORO1C', 'OSTF1', 'MANF', 'PALB2', 'BCDIN3D', 'AASDH', 'MAP3K14-AS1', 'GLOD5', 'SARDH', 'RHEB', 'IRX6', 'ZFYVE26', 'G2E3', 'LACRT', 'SPOP', 'TMEM261', 'KCNC4', 'LINC00235', 'TOR2A', 'ZNF483', 'PAX8-AS1', 'GNB1L', 'ZG16B', 'ZNF320', 'ADGRF1', 'CD52', 'CCM2', 'KIAA0125', 'MED11', 'CNN2', 'CST2', 'POGZ', 'GOLGA8DP', 'C18ORF42', 'RELB', 'FAM173B', 'SMPD1', 'LYST', 'ABCA11P', 'RHOC', 'C11ORF42', 'AACS', 'TMED6', 'FAM71C', 'OR2T33', 'EFNA1', 'HOXB7', 'MASTL', 'TRIML2', 'LINC00667', 'SYNJ2', 'SCGB1D1', 'RER1', 'SNORA5C', 'UNC79', 'MTFR1', 'LINC00847', 'PPP1R2P9', 'SNRNP200', 'SFXN2', 'PMPCB', 'PRDX4', 'FMO5', 'CABP5', 'RAX', 'STX12', 'LGR5', 'TECPR1', 'TGM2', 'VRK3', 'TSPAN16', 'UGT1A1', 'CBX8', 'TSNAX', 'RBP5', 'NUP153', 'OR5M8', 'GBA', 'RNF7', 'FZD10', 'C21ORF2', 'FAM183A', 'CTGF', 'LOC728554', 'HOXB8', 'GPR143', 'ELOVL1', 'LOC100129534', 'LCN10', 'NAT9', 'COX8A', 'LGI1', 'NCBP2-AS2', 'FBXO10', 'ZNF439', 'FRMPD4', 'STX16', 'MIS12', 'C4ORF17', 'MRPS23', 'RPL26', 'TTLL12', 'BAHD1', 'OR2T1', 'ZNF418', 'SNORD115-41', 'AGR2', 'TAS2R9', 'MZB1', 'GAPDH', 'CCNE1', 'RSRC2', 'EIF2AK1', 'MDM1', 'PRPF38B', 'RFNG', 'SNORD114-15', 'GADD45G', 'SEPHS1P1', 'PLEKHB1', 'SCN1B', 'STPG2', 'TTC12', 'PLD2', 'TCEANC', 'RIBC2', 'TPRX1', 'ATP2B4', 'STOX1', 'ZNF19', 'ULBP2', 'FCAMR', 'SLC10A5', 'TEPP', 'TEX29', 'SETD3', 'ZIM3', 'WDR38', 'RAPGEF2', 'LOC100134368', 'ESPL1', 'WDR24', 'PBX1', 'AGPAT6', 'ANKRD36BP1', 'HCRTR2', 'SIRPB1', 'LINC00964', 'CTSG', 'RPL13AP17', 'LINC00520', 'FAM13A-AS1', 'ELOVL5', 'ATP6V1B1', 'BMS1P4', 'FAM134B', 'ABCC9', 'TMEM143', 'APOC4', 'PEMT', 'OR5AU1', 'TMEM134', 'ETS2', 'ZCCHC16', 'SNORD95', 'PQLC2L', 'CCND3', 'HRASLS2', 'ATCAY', 'TLR8', 'ATP1B1', 'LOC652276', 'MED29', 'SFR1', 'LMOD2', 'GALNT1', 'ZNF766', 'PTPDC1', 'SEC11A', 'LOC644172', 'ZNF846', 'NHLH2', 'CCHCR1', 'C8ORF82', 'CRHR1', 'BPNT1', 'GCNT3', 'RNF128', 'SERPINA10', 'ZNF154', 'NKAIN4', 'MICALCL', 'SNORD58C', 'PDXP', 'SIDT1', 'HK2', 'CELA3B', 'NR2E3', 'RPL34-AS1', 'OR51F1', 'KCNIP4', 'RPS26P11', 'RAVER2', 'ZNF716', 'CD163L1', 'AGAP6', 'CTNND2', 'RHBG', 'SEMA5A', 'FRS3', 'TPGS1', 'DIRC2', 'SPDYE7P', 'SERTAD3', 'DMXL1', 'HTR2B', 'MLNR', 'TGFBI', 'TBX6', 'CHAC2', 'CRNKL1', 'NBPF15', 'SLC13A5', 'UNKL', 'SUPV3L1', 'FAM35BP', 'ANKRD20A4', 'C18ORF8', 'LPAR4', 'OAS2', 'CHST4', 'ATE1', 'DEFB124', 'PAXIP1-AS2', 'BLOC1S2', 'PSMG2', 'DNASE1L1', 'PRDM9', 'ZNF296', 'LINC00473', 'PPAT', 'FITM2', 'TM4SF18', 'DGKB', 'SERPINF1', 'MAOA', 'TESC', 'C10ORF113', 'ADGRD1', 'DYNLRB2', 'MRPL39', 'METTL2B', 'MYADML', 'IAH1', 'NGFRAP1', 'PLEKHG6', 'NKAIN2', 'RSL1D1', 'C11ORF70', 'ZMYM5', 'ZNF48', 'NPY4R', 'EOMES', 'NUPR1', 'HOXA11-AS', 'PPL', 'PTTG1IP', 'ALDH1A2', 'CLIP4', 'SHKBP1', 'DOT1L', 'ATP5G2', 'PPP1R11', 'SLC45A4', 'KRTAP5-1', 'FATE1', 'CCDC65', 'SNORD77', 'TFAM', 'ARL2BP', 'TRIM6-TRIM34', 'CT45A6', 'ADHFE1', 'CCDC183-AS1', 'OR1S1', 'ADAMTS18', 'ANKRD23', 'PAQR3', 'ZMYM2', 'OXA1L', 'SLC25A19', 'CD300E', 'HAUS7', 'ISX', 'ZHX3', 'GUCY2C', 'PCDHB10', 'SNORD8', 'SGTB', 'OR13C5', 'HBD', 'NRM', 'ARID4B', 'ZNF791', 'TYRO3', 'SPR', 'SRY', 'SLC37A3', 'SSX2', 'LRRC46', 'FAM189A1', 'RHD', 'ZNF226', 'PRR26', 'DIS3', 'CYBB', 'FEZF1', 'BMP3', 'RECQL4', 'AATK', 'ZNF484', 'PFDN4', 'WFDC10A', 'CNOT7', 'GTF3C5', 'KCND2', 'IPW', 'F2RL1', 'MLLT4-AS1', 'ERGIC2', 'MMRN2', 'TRIOBP', 'IMP4', 'IL1RL1', 'CPSF4L', 'SLC2A8', 'IGHMBP2', 'C11ORF95', 'ASCL2', 'KCNC3', 'OOEP', 'MMP19', 'ANKRD53', 'JMJD7-PLA2G4B', 'IGIP', 'AKAP6', 'EFCAB10', 'UBAP1', 'RTN4', 'TMEM194B', 'SNORA29', 'OR4F15', 'USP3', 'DNAH1', 'SMIM12', 'FAM47A', 'GPR34', 'SNORA48', 'AMMECR1', 'PTPRZ1', 'SLC4A2', 'H3F3C', 'PPIAL4G', 'SEL1L3', 'ABLIM1', 'ANTXR1', 'GOLGA2P5', 'SERPINH1', 'DIP2A', 'MRPS35', 'PPY', 'MGEA5', 'PRPH2', 'FAM58BP', 'EIF3F', 'TMEM52', 'CDK5RAP1', 'IHH', 'KLF7', 'CWC27', 'SMN2', 'SCEL', 'CSF2RA', 'FBXO38', 'ABTB2', 'CLEC18A', 'LRPAP1', 'NOP16', 'GHSR', 'SIPA1L3', 'CRTAP', 'THBS4', 'TBL1X', 'VWC2', 'FAM83D', 'SCUBE1', 'KLF1', 'SNRNP25', 'CIZ1', 'PRPF8', 'PAPOLB', 'PAPL', 'METTL3', 'ADORA2A-AS1', 'FAM99B', 'C1ORF174', 'CABLES1', 'POM121C', 'ZBED4', 'GPM6B', 'CT45A2', 'SLC27A1', 'ZUFSP', 'RANBP1', 'KCNJ9', 'OR4P4', 'FKBP11', 'HSD11B1', 'CGGBP1', 'PPP2R3B', 'EPHX2', 'C5ORF51', 'DTX2P1-UPK3BP1-PMS2P11', 'TPRG1', 'COX8C', 'CEP112', 'ADAMTS14', 'SPTB', 'SHOX', 'FUNDC1', 'GRAMD3', 'FAM214B', 'PAX2', 'BRMS1L', 'TMEM241', 'SLC24A5', 'MGMT', 'LIMS1', 'ZDHHC8', 'PITX1', 'PTPRM', 'RASA4CP', 'NTRK3', 'POLR2J3', 'JMJD4', 'AMER3', 'FAM66E', 'SOCS7', 'RALGAPB', 'SOGA1', 'TMED5', 'ZNF638', 'HS3ST5', 'BOLA2', 'LRRC69', 'NAPG', 'IFIT1', 'SLC4A7', 'MT1DP', 'OTOP3', 'ZNF124', 'TTC3', 'TFIP11', 'SSC4D', 'SPRN', 'CLDN7', 'EIF4EBP2', 'FBXL15', 'PDIA2', 'ZNF827', 'CHMP5', 'NME8', 'APLF', 'CYP39A1', 'MKS1', 'ADAMTS9', 'PCDH10', 'SSR1', 'KBTBD8', 'ZNF385D', 'MED13', 'GHRLOS', 'CFAP57', 'TTLL2', 'DAB2', 'SLC25A20', 'PPBP', 'CFAP70', 'MEIS3P1', 'ASPHD1', 'SNORD97', 'WNT10B', 'LOC644145', 'AIRE', 'TTC22', 'ASCL1', 'RAB27B', 'NMNAT1', 'CYP46A1', 'ZNRD1', 'SNORD18A', 'NCKAP1', 'CES1P1', 'ZNF564', 'PVRL1', 'RBM48', 'NUDT15', 'NOXO1', 'SPICE1', 'NEMF', 'IGFBP6', 'GRWD1', 'BMI1', 'RPL12', 'LIG1', 'HOXC4', 'LOXL2', 'MRPL50', 'NEFH', 'SCN4A', 'DDX23', 'FOXD4L5', 'CDH26', 'CHD1L', 'DIRAS1', 'NR1D1', 'MIR1-1HG', 'FAXDC2', 'ADAM21P1', 'ACRC', 'MTMR11', 'PUM2', 'TANGO6', 'HELT', 'KIAA1919', 'DCTPP1', 'PRTFDC1', 'C6ORF52', 'P2RX6', 'TDG', 'HAR1A', 'WHSC1L1', 'GEMIN8P4', 'GLIPR1L2', 'KRTAP4-9', 'ZNF586', 'TRMT2A', 'TSGA13', 'MYOT', 'RPS19BP1', 'TM7SF3', 'CCDC159', 'STAG3L1', 'ABCB1', 'MARK2', 'KRTAP5-AS1', 'ITGB5', 'BAALC', 'SLC39A3', 'ZGLP1', 'SNORD115-45', 'PRKAA1', 'CD8B', 'EXOC8', 'CA1', 'SNAR-D', 'OR51B6', 'LYPD3', 'OTOA', 'MYPOP', 'ZNF283', 'RBM24', 'RGS7BP', 'FLG', 'MEX3B', 'STRA6', 'MRPL32', 'TMEM184C', 'SLC27A4', 'CAND2', 'PCDH19', 'FGD5', 'ANKRD50', 'TNRC6A', 'TBC1D31', 'C17ORF64', 'RUNDC1', 'SNORA14A', 'TRAF1', 'STH', 'WIPF1', 'B9D2', 'KRT1', 'FGFBP2', 'LINC01089', 'TSPY4', 'IFT81', 'ARHGAP21', 'IQCF2', 'DCTN3', 'ST7', 'OR10A5', 'ERN2', 'OR4C16', 'TMEM223', 'COX19', 'SPEF1', 'NTPCR', 'PAPOLA', 'ASPH', 'APOOL', 'NUSAP1', 'LINC00928', 'DUSP6', 'EDDM3A', 'CABP1', 'WDR11', 'CRCT1', 'APOBEC1', 'MALAT1', 'NDN', 'DOC2B', 'LRRC41', 'KRTAP19-7', 'ACAP3', 'SLC22A7', 'MYH1', 'DYX1C1', 'RRAGA', 'FAM153B', 'FAM57B', 'MTTP', 'TSLP', 'MAPK10', 'ITGAV', 'SUMO2', 'KCTD7', 'LOC285768', 'STARD8', 'PTGER2', 'HTRA3', 'KIAA1328', 'H2AFZ', 'SLC14A1', 'BSCL2', 'FYTTD1', 'KIAA1033', 'NEDD4', 'NME1', 'CFL1', 'SUN5', 'GSG1', 'SIGLEC11', 'LINC00652', 'LARGE', 'AHNAK2', 'OSBP', 'RUNDC3B', 'NF2', 'LSM6', 'VAX2', 'S100A16', 'ATP6V0E2', 'FCGR2A', 'MATR3', 'CHID1', 'OR51B2', 'AKR7A2', 'ITGA6', 'ARID2', 'TMEM176A', 'SNAR-F', 'ASIC2', 'SPACA3', 'PKIA', 'GPR32', 'HSPA6', 'SPON1', 'TEX15', 'HIST1H1C', 'STRIP2', 'TAL2', 'RGCC', 'UCHL1', 'ABI2', 'ZBED2', 'RPL28', 'CRYGD', 'C5AR1', 'MED1', 'ACTA1', 'CRB2', 'HCRT', 'TMEM51', 'OR6N1', 'GABRG3', 'INTS4P2', 'ATP1B4', 'ACTR1B', 'LOC100272217', 'CLEC17A', 'ZNF322P1', 'SUGT1P3', 'LPCAT2', 'KIAA0355', 'TGS1', 'FIP1L1', 'NUP205', 'MRPL44', 'OR51A4', 'TMEM190', 'GNG13', 'TSPAN12', 'TRIP11', 'VWA5B2', 'CDKL1', 'OR2A14', 'WTH3DI', 'ARMCX5', 'LARP1B', 'MOSPD2', 'HYALP1', 'FREM2', 'OXT', 'C15ORF39', 'BMPR1B', 'FSTL1', 'RBMX2', 'C15ORF56', 'HSD11B1L', 'CELSR2', 'LMNB1', 'LRR1', 'PRDM15', 'SPACA7', 'UMPS', 'GXYLT2', 'MYO3B', 'SMURF1', 'GATM', 'CGB1', 'FAM63A', 'ATP6V1A', 'HSD17B1', 'KIF4A', 'ZNF274', 'DEXI', 'TSPAN32', 'STAT3', 'FER1L5', 'NKD2', 'ZSWIM2', 'DNAJC4', 'GTF2IRD2B', 'GTF2H2C', 'C1ORF105', 'TRIP13', 'NUP98', 'SYT2', 'GRIN2C', 'PRKCI', 'MMD2', 'C11ORF88', 'HPVC1', 'CDX4', 'RPGRIP1', 'ST8SIA1', 'FCRLA', 'RBFA', 'VAT1', 'TBX18', 'KLHL22', 'C17ORF104', 'ZNF788', 'FAM21C', 'ADORA3', 'ARRB2', 'UBAP2', 'OLIG3', 'RSU1P2', 'TRIM64', 'RPIA', 'ITGA9', 'CANX', 'TAC1', 'SPRR1A', 'EPC2', 'GRIK1', 'ELMOD1', 'STT3B', 'GRAMD1B', 'LPCAT1', 'GYPA', 'KIAA0753', 'AMFR', 'RNY4', 'EEF1B2', 'COA1', 'CERK', 'NXF3', 'LINC00488', 'SLC16A6', 'DRAM2', 'MINA', 'FAM138D', 'SLX1B', 'SFTPD', 'FDX1', 'PSMG1', 'SLC22A4', 'PLA2G7', 'PDLIM3', 'IFT22', 'SYS1', 'TNFAIP6', 'KLRB1', 'FAM66A', 'RABEP2', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 2.8930756384348784e-14 NRMSE: 5.690550036260579e-15 MAPE: 1.9111929829734602e-11 Pearson Correlation: 0.1535024572129539 Spearman Correlation: 0.1896756817416676 Coefficient of Determination: -12.382975358714846 RMSE: 2.4790582804510737 NRMSE: 0.7939617666118177 MAPE: 1326.7435981435572 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 1.414526142403078, tolerance: 0.030747074518831245 positive)
Pearson Correlation: 0.9998793085772086 Spearman Correlation: 0.9998118742688231 Coefficient of Determination: 0.9997388825346849 RMSE: 0.012215991533595994 NRMSE: 0.0024028307501172295 MAPE: 5.951337885828932 Pearson Correlation: 0.17917420517160335 Spearman Correlation: 0.18795496203194553 Coefficient of Determination: -7.575147315487028 RMSE: 1.9844090200763433 NRMSE: 0.6355416908446233 MAPE: 844.473646331746 Predictor: RandomForests Pearson Correlation: 0.6299903918913434 Spearman Correlation: 0.5935049904371837 Coefficient of Determination: 0.297338908966986 RMSE: 0.6337000118128928 NRMSE: 0.124645950395927 MAPE: 554.931810906388 Pearson Correlation: 0.4209562050780491 Spearman Correlation: 0.4075237845858427 Coefficient of Determination: 0.16865968174085844 RMSE: 0.6178738558949699 NRMSE: 0.19788490736101827 MAPE: 254.86663918510598 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['HCST', 'RITA1', 'RBM15B', 'PGA3', 'PBLD', 'KRTAP9-2', 'CYB5R3', 'FAM66A', 'OR4C12', 'DTX1', 'CYB5R4', 'CCL24', 'HOXC5', 'CERS1', 'MAPRE2', 'GATS', 'ATG4B', 'SPACA6P', 'ARSH', 'GNG4', 'OSGEP', 'UXT', 'USH1G', 'NALCN', 'MAP3K10', 'SBSN', 'ZNF202', 'SUPT20HL1', 'IL4I1', 'LOC93622', 'LEO1', 'PDS5B', 'RNF217', 'ZNF2', 'FGGY', 'SNORD62A', 'SERPINA13P', 'PNPLA6', 'FERMT2', 'FAM132A', 'RAI2', 'GADL1', 'VSTM4', 'EIF5A', 'LRRN4', 'NEDD1', 'ANKIB1', 'PLOD1', 'PDZD3', 'FOLH1', 'HTRA1', 'NTN3', 'C9ORF129', 'MYCNOS', 'FCRL6', 'HOXA6', 'C10ORF91', 'SLC8A2', 'ADCK3', 'KCNJ5', 'GALNT3', 'LINC01020', 'C5ORF60', 'RBM20', 'ZCCHC14', 'TTC13', 'FBXO27', 'LINC00592', 'LINC01300', 'OR51L1', 'SMIM6', 'FMN1', 'HSDL1', 'PHC2', 'SLC16A12', 'PAXBP1', 'TMEM44', 'CLPTM1', 'HMGB2', 'AGR3', 'DLK2', 'CCDC178', 'ADGRE3', 'TMEM110', 'TMCO5A', 'FAHD1', 'KCNQ4', 'EIF4E2', 'VARS', 'BMP8A', 'GALR1', 'ZNF645', 'NRG3', 'L2HGDH', 'PLA2G2D', 'LRP5L', 'ZNFX1', 'ICAM3', 'PDZD2', 'GALNTL5', 'TMED8', 'DCAF6', 'DEFB119', 'NUDT3', 'CALM3', 'FBXO18', 'CASC4', 'FAM58BP', 'DPCD', 'IFNL3', 'PUS7', 'SLC38A9', 'TRIM25', 'LRRC37A', 'QRFPR', 'ZNF70', 'JUNB', 'CCDC77', 'AMPD3', 'ORMDL3', 'NOXA1', 'AKAP12', 'PKN2', 'C9ORF89', 'ZNF398', 'NHLRC1', 'OR6C68', 'GLTSCR1L', 'C1ORF112', 'LOC728613', 'BAZ2B', 'SKA3', 'SUCNR1', 'SEPHS2', 'AOAH', 'NPAS1', 'INSRR', 'SDC1', 'MAGEB16', 'MEF2BNB-MEF2B', 'CLPS', 'TRIM35', 'GDAP1L1', 'GRAMD3', 'DDX28', 'TMEM56', 'NKAIN1', 'DMRTC1B', 'BRINP1', 'SP110', 'C19ORF45', 'C19ORF38', 'MS4A14', 'VPS37B', 'IL17D', 'KCNV2', 'CROCCP3', 'MUC6', 'FBXL16', 'HPVC1', 'FAM197Y2', 'ATP5G3', 'EXOC2', 'MOCOS', 'LCN9', 'HSP90AB1', 'PPIAL4E', 'TRIM36', 'KLF17', 'SNORD115-31', 'GOLGA2P5', 'HSPA1L', 'SFXN5', 'RANBP3L', 'LINC00114', 'GULP1', 'CD180', 'LCE1A', 'PDX1', 'RNFT2', 'SGOL1', 'DEGS1', 'CRTC3', 'PRDX2', 'PNPLA3', 'RPS6KB1', 'P2RX1', 'MANBA', 'HIST1H1E', 'FAM181A-AS1', 'PLEK', 'LYPLA1', 'RAB19', 'ZNF675', 'SNAP23', 'HHLA2', 'POLR2A', 'SKINTL', 'LGALS9', 'PRDX6', 'NOTCH1', 'LARP1B', 'ZIK1', 'TRIM34', 'IPO5', 'OR51B4', 'FAM188A', 'UBXN11', 'ID2B', 'GSTM2P1', 'ZNF74', 'OR52J3', 'SCARNA12', 'ZNF75A', 'C9ORF156', 'DBF4', 'PPIL2', 'LASP1', 'ST13', 'FMR1NB', 'MEOX2', 'DMXL2', 'RNASE1', 'UBE2D2', 'MSH4', 'FYN', 'CEACAM7', 'KIF25', 'ORAI1', 'HCG4B', 'IGFL1', 'OR13A1', 'TMEM125', 'USHBP1', 'SSR2', 'ZNF429', 'C3ORF17', 'VWC2L', 'CWC25', 'PCNAP1', 'RDH14', 'FAM71D', 'TYMSOS', 'COLQ', 'SUSD2', 'NSMCE2', 'LOC100268168', 'LAMA1', 'ACSF3', 'C4ORF45', 'PSMB8', 'ZNF688', 'TRIM9', 'COBLL1', 'ATP8A1', 'KRT27', 'RNASE2', 'TIMP2', 'ZFP36', 'LMBRD1', 'CD63', 'TTTY9B', 'OSBPL1A', 'KRT78', 'SCIMP', 'BRK1', 'MTHFD1L', 'SUN2', 'CAPZA3', 'APOF', 'ST5', 'TSPY4', 'CHRAC1', 'SERPINB7', 'SERPINA9', 'AWAT1', 'PYCR2', 'GPR161', 'DCDC1', 'ABCC6P2', 'ACACA', 'TAAR2', 'CCBL1', 'BAHCC1', 'FOXP4', 'PCDHB15', 'USH2A', 'PNCK', 'FJX1', 'CYP3A4', 'CD99', 'ECH1', 'MEGF9', 'MFRP', 'TXNRD1', 'CDC26', 'NPY6R', 'MRPL37', 'GTF2F1', 'ADGRB3', 'FBXO34', 'SP7', 'NEFH', 'VASP', 'NUTM2A-AS1', 'POU4F2', 'PIGL', 'SLC25A12', 'ZBTB38', 'CLEC18C', 'ESYT2', 'VPS4A', 'ACTN2', 'COLGALT1', 'SPATA24', 'UBQLN1', 'FOXA3', 'ABL2', 'SYT12', 'TGM7', 'LIMCH1', 'SLC16A1', 'SNORD33', 'GUCY1A3', 'GSTA5', 'PCF11', 'JAM3', 'C1QTNF9B-AS1', 'WDR33', 'MAFG', 'RNF19A', 'SPCS3', 'SMCP', 'CYTIP', 'MTMR10', 'RNPEPL1', 'MFSD9', 'SPERT', 'MYBPHL', 'NOA1', 'SUPT16H', 'BPTF', 'MYO1C', 'PTCHD3P1', 'CKAP2', 'OXR1', 'ANP32AP1', 'SPDYE1', 'MMP16', 'ATG16L1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.9549668485611394 Spearman Correlation: 0.8714031092973302 Coefficient of Determination: 0.9119616818507945 RMSE: 0.13316252784639696 NRMSE: 0.04743099834243881 MAPE: 31.82004667882179 Pearson Correlation: 0.46989986000125533 Spearman Correlation: 0.4034439332161249 Coefficient of Determination: -1.487322623654768 RMSE: 1.0221284333367522 NRMSE: 0.246670471640503 MAPE: 160.33820161578046 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.014718440976130509, tolerance: 0.010836139816194496 positive)
Pearson Correlation: 0.944375743334943 Spearman Correlation: 0.8438208144539747 Coefficient of Determination: 0.8917897912895114 RMSE: 0.14763192393644234 NRMSE: 0.05258483488386192 MAPE: 37.329120625898454 Pearson Correlation: 0.6517860439800612 Spearman Correlation: 0.45000311724585096 Coefficient of Determination: -0.0031032517449673946 RMSE: 0.6491009259658822 NRMSE: 0.15664766415664313 MAPE: 133.53893405437762 Predictor: RandomForests Pearson Correlation: 0.863085810992885 Spearman Correlation: 0.7124951490340891 Coefficient of Determination: 0.7421827847211484 RMSE: 0.22787785287826462 NRMSE: 0.0811675344179037 MAPE: 54.33707761351231 Pearson Correlation: 0.7855954202125759 Spearman Correlation: 0.7310129634786015 Coefficient of Determination: 0.5860841085886412 RMSE: 0.41696102323014045 NRMSE: 0.10062529218576163 MAPE: 76.85397091794455 Protein: CCND1 x_train_column_count: 859 x_train columns: ['PHOX2B', 'ITIH2', 'C12ORF76', 'C14ORF80', 'HS2ST1', 'GUF1', 'HIST2H2BA', 'CEL', 'SLC25A5-AS1', 'PIK3CD-AS1', 'DAB1', 'ZFYVE9', 'DKC1', 'LIX1L', 'CA5BP1', 'F2RL1', 'WDR33', 'BRD7', 'PSMA2', 'CUZD1', 'CCL18', 'NOL4', 'OR8G2', 'MIB2', 'NLGN4X', 'TAF6L', 'GDI2', 'C19ORF45', 'RSAD1', 'RWDD3', 'SLC7A11', 'RPRML', 'GABRP', 'OR10J3', 'CDS1', 'IRF2BP2', 'EXOC7', 'CST2', 'ABHD11', 'PGK1', 'WBP5', 'STK19', 'SAT2', 'CSNK1A1P1', 'DUSP23', 'MLLT6', 'IGSF22', 'FBXL20', 'ZWILCH', 'OIT3', 'CCDC176', 'CST5', 'BCYRN1', 'SCGB2A1', 'PRDX2', 'MBD3L1', 'ZNF543', 'NEGR1', 'CYP4F3', 'GEMIN6', 'VGLL1', 'H1FNT', 'TAP2', 'LRRFIP1', 'SHCBP1', 'LOC401127', 'CCDC107', 'SNORD114-16', 'PLB1', 'SEC61G', 'ROPN1', 'DEFA1B', 'PCDH7', 'TRIM78P', 'PPP3CB', 'POTEF', 'XYLB', 'TPD52', 'HSD17B4', 'THBS2', 'CHPF', 'PCDHGA1', 'CFAP57', 'NUB1', 'TTC28-AS1', 'METTL13', 'COX7B2', 'PBLD', 'HTR7P1', 'SYTL5', 'SEC22A', 'CRYGA', 'RASSF1', 'ATP1A1-AS1', 'MTHFD1L', 'BBOX1', 'TRAPPC5', 'ZBTB5', 'INS-IGF2', 'GRIA1', 'OR5B2', 'DNAH3', 'C9ORF50', 'CLK4', 'DOCK11', 'SNORA28', 'SNORD66', 'VBP1', 'DFNB59', 'GOLGA3', 'PSMD9', 'SEH1L', 'C7ORF50', 'TNS4', 'ERCC1', 'DGKI', 'ZNF385A', 'LRRC25', 'PABPC4', 'RAP2C', 'MIER2', 'STK26', 'PFKFB3', 'PCDH11Y', 'RBP1', 'FAM182A', 'AP1S3', 'EDRF1', 'TSPAN33', 'HCCS', 'STX3', 'THAP10', 'RNF114', 'CAP1', 'EPS8', 'OS9', 'ZNF674', 'GPX8', 'GRB2', 'TMPRSS2', 'C1ORF204', 'ZDHHC17', 'TCF7', 'PVRL2', 'COG1', 'OTOP2', 'HES2', 'TTC9C', 'ZNF263', 'SUOX', 'KRT9', 'ZNF717', 'TONSL', 'THUMPD2', 'LINC00982', 'ZNF24', 'ZMYND10', 'LIPG', 'EXTL2', 'GID8', 'CHRNA4', 'MKNK1', 'GNG12', 'RDH10', 'ZNF750', 'PIK3C2G', 'SEPT1', 'P4HTM', 'PTPRR', 'GAK', 'UBE2MP1', 'ITGB4', 'C20ORF194', 'ZNF593', 'SRCAP', 'TMEM230', 'FES', 'MAPKAPK5', 'AQP3', 'RAD1', 'OCA2', 'CD40', 'ERBB2IP', 'RALGDS', 'CLTA', 'C1QL1', 'SPOCK1', 'RAD51B', 'GATM', 'RBPMS2', 'ZNF767P', 'VDR', 'PHKB', 'FIZ1', 'NXF1', 'VIT', 'SRP72', 'ARHGEF1', 'OAZ3', 'FAM83A', 'CPNE5', 'CIDECP', 'ESF1', 'MT4', 'SOX15', 'CHIC1', 'KIAA1755', 'HIST1H4C', 'IL4R', 'SERPINE2', 'FAM208B', 'NBPF22P', 'FAM96A', 'SNORD126', 'SWI5', 'TSIX', 'OR56A3', 'ZNF714', 'OSGEP', 'F2R', 'NAA15', 'ARHGEF3', 'PRMT9', 'NACC2', 'IWS1', 'IL12B', 'UBXN10', 'PAPOLB', 'PSMD12', 'FUBP3', 'TMEM182', 'NANOS3', 'HBG2', 'RPL6', 'SEMA3D', 'CCNB1IP1', 'SNORD86', 'DCUN1D4', 'SERPINB6', 'LRRC70', 'PTPRS', 'NAA30', 'WNT8A', 'CDK16', 'MTMR4', 'TEX13B', 'CCDC65', 'MAP1B', 'DHRS7', 'CYP17A1', 'TRIM9', 'SMG8', 'TADA2A', 'NUDT13', 'ALG3', 'CDC45', 'CC2D1B', 'C4ORF45', 'INPP5D', 'MED13', 'RGS9', 'IFNLR1', 'OR2C3', 'BRDTP1', 'KIF18A', 'PTGES3', 'STC1', 'CDC42SE2', 'ULK4P3', 'MAZ', 'AGMAT', 'BPIFC', 'SMARCA1', 'TOE1', 'GCAT', 'CXADRP2', 'LHX2', 'ROBO3', 'KRTAP12-1', 'FLYWCH2', 'C1QL3', 'SNORD81', 'LIN7A', 'KCNK12', 'OR2L2', 'SMAD9', 'AKAP10', 'ATP5L', 'SERPINB2', 'C1ORF110', 'RCVRN', 'CSGALNACT2', 'FOXR1', 'RABL2A', 'C21ORF62-AS1', 'ZNF331', 'DPY19L2', 'PFN1P2', 'TFAMP1', 'OR10R2', 'LYZL6', 'EDDM3B', 'PMS2P3', 'GFI1', 'RNASEH2B', 'SLC7A7', 'SKINTL', 'ZNF333', 'SPTSSB', 'MUC16', 'RAB39B', 'APOLD1', 'MIR1-1HG', 'OR10P1', 'MX2', 'GPR176', 'ZNF786', 'CLCN1', 'IGFLR1', 'ZBTB20', 'LEO1', 'OR5M9', 'STAC3', 'TMEM120B', 'CX3CR1', 'C11ORF74', 'SMIM20', 'WDR64', 'ANKRD28', 'CCDC7', 'ARID1A', 'NR1H2', 'BCAS4', 'PGC', 'RCN3', 'KDR', 'TMED1', 'DGCR2', 'RUVBL1', 'PGK2', 'LINC00152', 'CACNG5', 'GTF2A2', 'FTMT', 'ZACN', 'C1GALT1C1', 'PAX8-AS1', 'OSCP1', 'TPRA1', 'ARL15', 'AGR3', 'SNORD114-30', 'FCGR2C', 'ZBP1', 'ANXA2P2', 'HDC', 'CNPY4', 'ARL4D', 'CCDC183-AS1', 'TMEM8A', 'EVI5L', 'LOC613037', 'KRIT1', 'GDNF', 'KPRP', 'CLDN2', 'AGBL4', 'C10ORF67', 'SNORD111B', 'P2RY2', 'ZNF426', 'GYPA', 'GCSAM', 'SETD6', 'CLU', 'AMPH', 'TBC1D5', 'TMEM256', 'METTL18', 'TAS2R13', 'EXOSC7', 'TACC2', 'LIMS2', 'GAGE8', 'IER5', 'SP1', 'ADORA2B', 'SNORD85', 'SUGP1', 'PRAMEF20', 'SCGB3A2', 'LHFPL3-AS2', 'MMP15', 'KRTAP20-4', 'DCDC2B', 'HAL', 'FAM63A', 'XIAP', 'KLHL34', 'EPS8L3', 'RGS20', 'ZNF789', 'TNFRSF4', 'PDE1B', 'HEATR1', 'GREB1L', 'TMIGD2', 'HADHA', 'ZNF572', 'PSMA1', 'LGALS9C', 'SYT5', 'CRIP2', 'SS18L2', 'FAM66D', 'SCARNA8', 'LBX2', 'CALR', 'SRSF11', 'BIN3-IT1', 'LIPF', 'OPN1MW', 'RCAN1', 'RAB5C', 'JAM3', 'YEATS2', 'DNAJA1', 'TREX1', 'SPATA31A5', 'MRPS33', 'DHRS9', 'ATRIP', 'RAD9A', 'YY2', 'C15ORF62', 'PEX16', 'KCNAB2', 'UBA6', 'FAM175B', 'RPP14', 'TCAF1', 'FAM131B', 'PRELID1', 'CATSPERG', 'SPAG8', 'ZNF645', 'GSTO1', 'PRKCE', 'EPHB3', 'SNORA53', 'MATR3', 'SELM', 'SNORD115-44', 'TBX15', 'XPO5', 'CYP1A1', 'NGRN', 'CLN6', 'ARFIP2', 'HSPA1B', 'IDS', 'APOC1P1', 'AP3D1', 'EIF2S2', 'ERMARD', 'OR6K2', 'ILF3', 'RPRM', 'TMEM98', 'ZNF292', 'RITA1', 'OTOR', 'OR10H2', 'SLC25A28', 'MSTO2P', 'ARL14', 'ANKRD35', 'PTTG2', 'PPIL6', 'SNORD116-11', 'RERGL', 'ADCY2', 'UBE2D1', 'DIAPH2', 'MDFIC', 'KRT73', 'PILRB', 'SLC22A25', 'PRCD', 'EPHX3', 'MAN1C1', 'CYSLTR2', 'FAM184A', 'CPTP', 'OR4N5', 'KNG1', 'CSTA', 'OR4C6', 'CLEC2L', 'ELMOD1', 'ARPC2', 'G3BP1', 'ISY1', 'TSNAXIP1', 'PPP3CA', 'ARMCX1', 'TOP1P1', 'FCRLA', 'PCDHB7', 'CAMSAP3', 'SAP30BP', 'SPRR2C', 'CDNF', 'FPR3', 'IKZF2', 'CEP83-AS1', 'PEX11A', 'NRM', 'LINC00910', 'CP', 'CHRNA1', 'FRYL', 'RAB35', 'ANKRD22', 'TNXB', 'STIM2', 'OR2C1', 'CLIC5', 'MAP4K3', 'RAN', 'TSSK1B', 'ADAMTSL5', 'POLR2I', 'PPAPDC1B', 'SLCO2A1', 'GPR68', 'PPP1R26', 'SPEN', 'GTDC1', 'LRRC45', 'DEFB132', 'MAPK10', 'RNFT2', 'RAP1GAP2', 'PALMD', 'CLPS', 'PPP1R14A', 'POSTN', 'NEMF', 'KRT82', 'ELOF1', 'CDC6', 'SNORA30', 'NPS', 'CCDC36', 'HIST1H4L', 'C10ORF131', 'GSE1', 'MEFV', 'CREBZF', 'PCDHB8', 'IL2RA', 'ITGA9', 'SEMA5B', 'GDF2', 'HPDL', 'PIM2', 'GNA11', 'LSM3', 'UGGT2', 'AURKB', 'ZNF436', 'ID2B', 'ZKSCAN1', 'RFX5', 'PRSS57', 'WEE2-AS1', 'WBP1L', 'SRSF1', 'SNORD115-45', 'CKMT2', 'RBM26', 'BDKRB2', 'CDKL1', 'TP53I13', 'TNFRSF13C', 'TECTB', 'TTLL5', 'ABHD17C', 'TCAF2', 'ZNF577', 'PRCP', 'NACAP1', 'IDH1', 'RPL21', 'HAND2', 'PCSK6', 'FBXL8', 'NRADDP', 'CD274', 'B4GALNT2', 'PEG10', 'LSM6', 'CDC37', 'ZW10', 'CRCP', 'SLC17A4', 'DGKA', 'LRRC6', 'FAF1', 'HRNR', 'EMC6', 'STYXL1', 'G6PC3', 'EFHD1', 'PDGFA', 'LOC344967', 'SYNJ2', 'MTX2', 'CSTF2T', 'COL21A1', 'CD3EAP', 'FAIM2', 'IFNK', 'GRM6', 'ATP1A4', 'PTRH1', 'LRRC47', 'CIAO1', 'RTN3', 'ZFYVE28', 'ANKRA2', 'ODAM', 'MAB21L2', 'MAATS1', 'PABPC5', 'RPS7', 'COQ9', 'DERL2', 'CENPK', 'EIF5B', 'BPIFB3', 'TNFRSF13B', 'KHDC3L', 'C4ORF17', 'ARNTL2', 'ZUFSP', 'EPB41L4B', 'PRR14', 'TSR1', 'NCR2', 'MRGBP', 'IRGC', 'PSMA6', 'SH3RF1', 'CA9', 'EPHA3', 'ST13', 'GCNT1', 'SPACA6P', 'FBLN1', 'POLR3H', 'UGT2A3', 'IFNB1', 'TUBB2A', 'SUSD5', 'TSEN54', 'GCLC', 'RNMT', 'MESDC1', 'NICN1', 'GCA', 'GALP', 'RNF150', 'PECR', 'GOLGA8A', 'LINC00242', 'VEGFC', 'TSPAN3', 'MGC72080', 'SNORA31', 'ZNF221', 'DNAJB11', 'SNORD17', 'PACSIN1', 'ARHGAP18', 'SNORD115-32', 'RASGEF1A', 'OGFOD1', 'BTBD17', 'PYCR1', 'HLA-DRB1', 'SPRY2', 'LOC389705', 'RAB38', 'DBF4', 'ATP5O', 'CLEC11A', 'EVL', 'ALDOB', 'SNRPE', 'HOXC12', 'SPRR3', 'PATE4', 'KLC3', 'BCL10', 'TBC1D25', 'IL9', 'PFDN2', 'TNMD', 'LGALS14', 'UBQLNL', 'ZSCAN10', 'CT45A2', 'MGST3', 'SEPT10', 'FCGR1A', 'POM121L2', 'LOC389332', 'ETAA1', 'C9', 'ADGRE4P', 'C1QTNF2', 'KRT6A', 'SLC25A23', 'SH2D4B', 'MAN2B2', 'GRIA3', 'TSHR', 'MAT2B', 'ELOVL2', 'SYCP3', 'PTPRO', 'ADRM1', 'WDR47', 'MAP3K4', 'ZNF585B', 'POU6F2', 'MRPL55', 'C3', 'ZNF800', 'BCLAF1', 'FAM217B', 'DDAH2', 'BIVM', 'C4ORF48', 'KRT31', 'GPN2', 'IRF9', 'FAM195B', 'IRF7', 'LRRC71', 'RPP25L', 'SPRR2F', 'DNMT1', 'AFG3L1P', 'HS3ST5', 'FAM150A', 'C8ORF86', 'RSPO4', 'PPP1R3F', 'ZNF253', 'SIRPA', 'RALGAPB', 'IFITM2', 'SOCS1', 'LIMD1', 'NFS1', 'LOC284023', 'AMPD2', 'COA3', 'HSPA12B', 'YBX1', 'DDX27', 'NMB', 'MED6', 'SEMA3F', 'PABPC3', 'PRKAB2', 'C1ORF226', 'BCL11B', 'TSPYL4', 'NDUFA7', 'GABPA', 'C19ORF12', 'SDC4P', 'ICE1', 'CWC27', 'SNORD27', 'DIP2B', 'CAPZB', 'GPD1L', 'MEG8', 'PAPLN', 'RHPN2', 'NR0B1', 'L3HYPDH', 'PLAT', 'B3GNT9', 'MSX1', 'PDK3', 'MCM2', 'SPTBN4', 'COL7A1', 'KIAA1257', 'SIRT2', 'PGAP2', 'CD33', 'MS4A13', 'SLC25A20', 'LRRK2', 'CARTPT', 'IL6ST', 'CCDC64', 'ATP6V1G1', 'KBTBD7', 'KCNC1', 'FBF1', 'FAM150B', 'FAHD2CP', 'PCNA', 'C12ORF73', 'SNORD38B', 'EPS15L1', 'EBPL', 'UFC1', 'YEATS4', 'STH', 'BOC', 'PDC', 'C3ORF38', 'ZNF814', 'LOC145474', 'HMP19', 'INMT', 'PWAR1', 'SCARB2', 'NLRP4', 'SNORA71B', 'UBN2', 'DHX37', 'MED17', 'NAIP', 'HAND1', 'TRAP1', 'NRIP2', 'IGF1R', 'PLBD1', 'TUBBP5', 'HDAC5', 'PSMD14', 'ZNF835', 'SEPT7P9', 'PCGF2', 'FHOD3', 'MUTYH', 'ERBB4', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.0129618083898321e-14 NRMSE: 6.380138367869043e-15 MAPE: 2.88118844879157e-11 Pearson Correlation: 0.14893554287237942 Spearman Correlation: 0.003962642925722266 Coefficient of Determination: -6.017510026810089 RMSE: 0.7310313396349912 NRMSE: 0.4670470219106523 MAPE: 786.6204636415564 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.37537869104340005, tolerance: 0.0027873943484564415 positive)
Pearson Correlation: 0.9991975420465201 Spearman Correlation: 0.9988542536776216 Coefficient of Determination: 0.998251507012673 RMSE: 0.009517875445503435 NRMSE: 0.005994832362631913 MAPE: 18.639784725523047 Pearson Correlation: 0.18682185363801732 Spearman Correlation: 0.013513884213020112 Coefficient of Determination: -7.118138699659285 RMSE: 0.7862718155256503 NRMSE: 0.5023394893533498 MAPE: 692.9300977061354 Predictor: RandomForests Pearson Correlation: 0.5757007949442724 Spearman Correlation: 0.58819199250595 Coefficient of Determination: 0.2911408441695924 RMSE: 0.19164083142145064 NRMSE: 0.12070494773597365 MAPE: 519.0980873622718 Pearson Correlation: 0.3312680578667598 Spearman Correlation: 0.2885148193867754 Coefficient of Determination: 0.10822712261053258 RMSE: 0.2605983157696347 NRMSE: 0.16649309091989287 MAPE: 249.34311398151414 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['CRABP1', 'C3AR1', 'MED30', 'ZNF804B', 'BEAN1', 'GDF6', 'CELSR2', 'CPLX3', 'GPR4', 'C16ORF54', 'CLP1', 'LINC01555', 'OR51E2', 'SRSF12', 'CACTIN', 'FANCM', 'CHTOP', 'PFN4', 'LYZL4', 'SLC13A5', 'SMNDC1', 'NETO1', 'LINC00643', 'MORF4L1', 'CDC37L1', 'ZFYVE21', 'C14ORF166', 'CAPN10', 'GPA33', 'ELOVL2', 'FLJ16779', 'GRIK2', 'CLGN', 'AJUBA', 'EMC6', 'KRTAP13-1', 'EPC2', 'ARHGAP30', 'KRAS', 'TMCO5A', 'ABCC6P2', 'DEPDC5', 'ENSA', 'SAR1B', 'C7ORF43', 'ANAPC16', 'ARCN1', 'OR13A1', 'HBA2', 'ALCAM', 'CYMP', 'AP2S1', 'HOXD12', 'SREK1IP1', 'CLPP', 'CLIP2', 'EXOC3-AS1', 'XIST', 'UBQLN4', 'RHBDF2', 'DPP10', 'DCDC1', 'KRTAP1-3', 'TNFSF14', 'RPS6KA3', 'USP12', 'RRBP1', 'AKT3', 'ARAP3', 'NCKIPSD', 'TNFRSF6B', 'MLYCD', 'PARPBP', 'MED12', 'TMSB4Y', 'HRSP12', 'SLC4A1AP', 'TLX1', 'EGF', 'DTNBP1', 'FAM214B', 'TUBA1C', 'KPNA7', 'SNX2', 'MAGEA1', 'ZSCAN32', 'LOC340017', 'BMP7', 'GPI', 'SNCG', 'METRN', 'VPS29', 'BMP5', 'KIAA1875', 'GFM2', 'RHBDF1', 'RPS5', 'KCNJ14', 'ZMYM5', 'ZNF587', 'AFF1', 'ZNF408', 'RBP1', 'ARX', 'TPTEP1', 'CROCCP2', 'IFRD1', 'C12ORF77', 'RASSF8', 'FARS2', 'EPOR', 'ZFP14', 'CSN2', 'CDRT1', 'SDHAP3', 'CYP2D6', 'CEBPA-AS1', 'OR11L1', 'NRP2', 'LOC100132215', 'ZC3H11A', 'MAP3K19', 'CASP6', 'SNORA49', 'MGMT', 'ATP5J2', 'LOC90784', 'ZNF395', 'ZDHHC17', 'HCFC2', 'CDH17', 'TULP2', 'AGR3', 'CABP5', 'VTRNA1-1', 'VTN', 'COL26A1', 'ITPK1', 'ISCA2', 'CHRNG', 'KLHL35', 'GPR45', 'CD59', 'LOC440173', 'NCF4', 'CXCL3', 'MAS1L', 'CLEC4C', 'TRIM61', 'SRP14P1', 'MBD1', 'ANKIB1', 'SERTM1', 'WDR13', 'TNNT2', 'OPN1LW', 'NME3', 'DEPDC1B', 'HLA-DPB1', 'DET1', 'GPR61', 'VPS28', 'SLC27A4', 'EXOC7', 'SNORD115-2', 'RNF20', 'HDC', 'SPCS3', 'TEX14', 'SEC23B', 'BOLA2', 'HDAC2', 'VWA5A', 'BLM', 'RNPEPL1', 'PRAMEF17', 'A2M-AS1', 'CPTP', 'NGFRAP1', 'REM1', 'CLDN8', 'SORL1', 'POU2AF1', 'MAML2', 'NUP153', 'CEP170B', 'RPS26P11', 'LRGUK', 'TMEM86B', 'CCDC113', 'TMC6', 'FADS1', 'MAB21L3', 'SNORA23', 'C12ORF43', 'AIM1', 'SPTBN2', 'PAX1', 'FAM189A1', 'USP25', 'LINC00882', 'COMMD8', 'FAM9C', 'ZNF841', 'INO80', 'KDM8', 'CLIC4', 'GJA9', 'ZP1', 'EIF1AX', 'PDCD2', 'NAA38', 'CDCA5', 'GCNT2', 'OR2L2', 'ZKSCAN7', 'IRX1', 'TRAF5', 'KRT23', 'SSR4', 'FERMT3', 'STRA6', 'TBC1D3P1-DHX40P1', 'ARMS2', 'IGIP', 'KRTAP17-1', 'CDH16', 'ATXN1L', 'MRPL23', 'FAM66E', 'SLC28A1', 'MTERF3', 'CIITA', 'TMC1', 'INGX', 'GATA1', 'ZKSCAN5', 'GOLGA8IP', 'DYNLRB2', 'VCAN', 'HIPK1', 'GPR141', 'KLHL3', 'C10ORF95', 'CEACAM18', 'KALRN', 'FAM126B', 'PROZ', 'NF2', 'NAGK', 'PEX6', 'COL1A1', 'MB21D2', 'SP110', 'NUCB1', 'SUPT20HL2', 'ATRX', 'FOXL2', 'THG1L', 'PSME1', 'ARV1', 'RAB42', 'IL7R', 'SDR42E1', 'C6ORF47', 'ERH', 'YAF2', 'DYX1C1', 'IL23R', 'PYGM', 'RNASEL', 'ICAM3', 'SNX15', 'KLRG2', 'HPVC1', 'PTTG3P', 'TNIP3', 'ENOSF1', 'KRT13', 'TAF1', 'RBM41', 'KCNV1', 'MT1E', 'FOXB1', 'GBX2', 'CCP110', 'NOVA2', 'GGA3', 'AUTS2', 'OR1J2', 'SERINC5', 'COPS7B', 'MRPL4', 'INPP5D', 'TTC17', 'ETV6', 'C3ORF20', 'KIAA0895L', 'PRKD3', 'ZNF772', 'CMAS', 'FN3KRP', 'SNHG15', 'ELAVL1', 'IGF2-AS', 'INSL4', 'PCGF5', 'XPOT', 'HSD3B2', 'SNORD19', 'KLHL8', 'LY6G6F', 'GKAP1', 'EIF3D', 'TUSC5', 'FAM171B', 'GAB2', 'TMEM31', 'SLC8A2', 'ARHGAP9', 'DGCR5', 'SRRM1', 'BAX', 'KCNB2', 'SEPT12', 'ARL1', 'KLK4', 'CYB5D2', 'APOBEC4', 'NKX6-2', 'PAX8', 'MSTO2P', 'TNS2', 'C9ORF139', 'OR9I1', 'MTM1', 'WRAP53', 'ZBED3', 'TTBK2', 'PTPMT1', 'TECPR1', 'KDM6B', 'USP16', 'HRNR', 'YTHDF2', 'TPD52L3', 'LYRM7', 'OR4D2', 'SLC44A2', 'RPL36', 'TMEM107', 'OR10W1', 'CHN2', 'C19ORF57', 'HSPB6', 'MCRS1', 'SNORA66', 'RPAIN', 'FSCN3', 'C22ORF39', 'PAPOLB', 'KIAA1191', 'MMD', 'LINC00628', 'FAM107A', 'CYP1A1', 'JMJD6', 'CCDC137', 'POLR2A', 'TAOK2', 'SIGLEC12', 'SNORD49B', 'RFPL3', 'TMEM189-UBE2V1', 'PI15', 'OR6K6', 'HAO1', 'ANKRD36', 'RORB', 'PROCR', 'ADGRG5', 'CCL8', 'ZDHHC16', 'GNL3L', 'LRRC14B', 'PIF1', 'DHX33', 'ZBTB38', 'AIFM2', 'NPR2', 'S100A5', 'ZNF20', 'MLH3', 'EBI3', 'SFMBT2', 'RGS9BP', 'STOX2', 'MMACHC', 'OR14A16', 'NACC1', 'APOA4', 'ATM', 'LINC00112', 'SCARNA18', 'ARRB2', 'PAPOLG', 'C1ORF61', 'TAS2R8', 'PTCHD3P1', 'NTN4', 'MTHFSD', 'NR1I2', 'PTPRCAP', 'SATB2-AS1', 'RNF126', 'SMCHD1', 'MYO18A', 'SLC43A1', 'HAO2', 'RDX', 'SNORD23', 'CCDC102A', 'COLEC12', 'DPH3P1', 'UNC5D', 'FZD10', 'SEPN1', 'BMP10', 'STAG3', 'NDUFA1', 'CTH', 'UMPS', 'UGT2B10', 'ART5', 'WASF3', 'TET1', 'APBB1IP', 'ZHX1', 'CNTROB', 'ELF5', 'TRMT13', 'RPL28', 'KIF3B', 'PGA5', 'AS3MT', 'C2ORF57', 'MRPL51', 'TBC1D2', 'MRC1', 'MMS22L', 'WDR5B', 'TRIM6', 'METTL22', 'TONSL', 'OR52A5', 'MND1', 'PROK1', 'NOL11', 'C12ORF4', 'TMEM220', 'METTL24', 'SPC25', 'DNMBP-AS1', 'BLID', 'SMEK3P', 'MUTYH', 'CAPZA2', 'NCOR2', 'EXT2', 'CD47', 'LYL1', 'KLHL4', 'PRIM1', 'ALDH1L2', 'PRPF18', 'VSX1', 'C1ORF162', 'MAP3K10', 'C9ORF72', 'GALNT7', 'DRAP1', 'HKDC1', 'IMMP1L', 'IKZF3', 'IFIT2', 'CD70', 'SMARCA5', 'NKX2-1', 'GTPBP2', 'GEMIN8P4', 'OR51G1', 'SNRPB2', 'CFI', 'SLC39A11', 'BANF1', 'VLDLR', 'MGC16275', 'FBXO24', 'TINF2', 'OSTC', 'TAF13', 'NEUROD1', 'MTNR1A', 'CFAP58', 'CBLB', 'RGL3', 'PIGZ', 'GABPB1', 'FAM45A', 'MMP25', 'DLX6', 'EPHX2', 'FAM160A1', 'SPATC1', 'TWISTNB', 'ZDHHC21', 'SNORD72', 'STK36', 'LOC100129034', 'RNH1', 'BLOC1S3', 'CDK19', 'OR8H2', 'HCN4', 'KRTAP20-4', 'FUT3', 'CLEC1A', 'SDK1', 'WDR18', 'OR6C2', 'SLC17A9', 'MRPL52', 'NINL', 'OR3A3', 'OR6B3', 'IRF8', 'ADGRF4', 'RGS11', 'PEMT', 'FAM127C', 'ZNF43', 'ZMYND19', 'ZNF441', 'FBXO9', 'CDC42EP3', 'GSTA1', 'CGB8', 'LINC00937', 'MIR205HG', 'SLC17A3', 'BTBD2', 'PIP4K2B', 'TPM3P9', 'DENND5B', 'TMEM212', 'SCCPDH', 'LCE4A', 'AKT2', 'FOCAD', 'OPA3', 'OLA1', 'SPIB', 'WDR25', 'MEPE', 'CLDN14', 'PLCL1', 'CACNA1B', 'RGS13', 'GIP', 'SNORD44', 'CALR', 'ECE1', 'RNASE11', 'CRYL1', 'FIP1L1', 'IDE', 'FUT6', 'MRPS9', 'LINC01547', 'WDR27', 'SLC25A35', 'PCDHA8', 'CD200R1L', 'TM9SF1', 'TG', 'P2RY10', 'TRAT1', 'NXF1', 'C20ORF27', 'FAM114A1', 'ZC3H18', 'FAR2', 'BPY2', 'EEF1E1', 'FAM186B', 'TGIF1', 'TMEM63C', 'FAM32A', 'LPAL2', 'SOAT1', 'SNORD115-14', 'MRPL12', 'GIGYF2', 'RBM11', 'EBNA1BP2', 'NANOS1', 'ZFAND6', 'VSIG2', 'RRP1', 'TEX12', 'CDYL2', 'FBN3', 'PSPC1', 'ZNF618', 'SSX5', 'DNTTIP2', 'ST13', 'LINC00410', 'CRISPLD2', 'RHOT2', 'GFPT1', 'QPCTL', 'GOLGA7', 'NKPD1', 'FNDC7', 'C17ORF51', 'GOT1', 'EFR3B', 'FAM181A', 'NPHS2', 'HOXD8', 'TTLL2', 'CBX3', 'PRDX6', 'TEFM', 'FAM69A', 'SCAPER', 'GRK4', 'SDCBP2', 'HLA-J', 'CCL24', 'ZYX', 'RAMP3', 'ITGB3BP', 'CLEC1B', 'HS6ST2', 'GJA10', 'CT45A3', 'ATP5I', 'TMUB1', 'RHBG', 'ARL3', 'NELL2', 'TMEM184A', 'STK39', 'ANKHD1-EIF4EBP3', 'H3F3AP5', 'ZBTB37', 'GBP4', 'SLC6A10P', 'N6AMT2', 'TMEM217', 'VEGFA', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 5.354295293631399e-13 NRMSE: 9.121923256097245e-14 MAPE: 9.473703792373486e-10 Pearson Correlation: 0.19223043263967712 Spearman Correlation: 0.2411077444855921 Coefficient of Determination: -35.158949964354235 RMSE: 5.217802695038787 NRMSE: 1.1545088383756583 MAPE: 7006.598107333608 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 4.162917109598258, tolerance: 0.05684616744754108 positive)
Pearson Correlation: 0.9978376561934014 Spearman Correlation: 0.9931518767414882 Coefficient of Determination: 0.9956563205344108 RMSE: 0.06774673070471503 NRMSE: 0.011541770568293955 MAPE: 70.90218450636826 Pearson Correlation: 0.2194790177768223 Spearman Correlation: 0.25350690158231404 Coefficient of Determination: -6.251153767991165 RMSE: 2.3365942575363454 NRMSE: 0.5170028227760473 MAPE: 4388.625136017578 Predictor: RandomForests Pearson Correlation: 0.8537614383341078 Spearman Correlation: 0.6908844278583077 Coefficient of Determination: 0.7240674882832658 RMSE: 0.5399591366417813 NRMSE: 0.09199092571030569 MAPE: 517.4033908657608 Pearson Correlation: 0.7949057844168548 Spearman Correlation: 0.601980464150743 Coefficient of Determination: 0.6077847881864886 RMSE: 0.543427940882799 NRMSE: 0.12024072151406107 MAPE: 232.2777744428535 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['CCDC105', 'DNAH2', 'LACC1', 'TNNC1', 'GSTM2P1', 'FAM167A-AS1', 'RASSF3', 'TOPBP1', 'DYNLT3', 'FAM74A3', 'ELFN1', 'SMEK3P', 'FMO3', 'NPHS1', 'NOL11', 'MAP2K5', 'BOLA1', 'WFDC13', 'CSRP2', 'BTN2A3P', 'HIST1H3E', 'MEP1B', 'SNRNP200', 'NHLRC1', 'ARRDC5', 'COBL', 'HOGA1', 'IL17C', 'TRABD', 'MAS1', 'METTL3', 'MICAL1', 'CNP', 'CLSTN2', 'INTS4P2', 'MAPK6', 'KIF1BP', 'RAB40A', 'KDM7A', 'CABP4', 'ARC', 'HKDC1', 'RCOR3', 'PTGIR', 'CSMD1', 'GAGE1', 'MYO6', 'SRRD', 'COL6A2', 'RNF31', 'IQCD', 'IPO9', 'AGER', 'CELF1', 'FAM13C', 'PAGE2B', 'CALCB', 'GAS2L1', 'GOSR2', 'TFPT', 'SDC1', 'HLA-DRA', 'VASN', 'PPP1CA', 'CREBBP', 'CECR5-AS1', 'TUBD1', 'TSPAN16', 'PHOX2A', 'ALOX12P2', 'MMADHC', 'ZNRF1', 'SAV1', 'CP', 'KLHDC3', 'RIC1', 'MRGPRD', 'FGFBP3', 'PDZD2', 'SUV420H1', 'VSTM5', 'NEU2', 'WHAMMP3', 'OR56A4', 'ZNF18', 'SCNN1B', 'C9ORF89', 'ZSCAN23', 'MATN2', 'TOX4', 'PAQR8', 'SNORA77', 'PPP1R7', 'LILRA5', 'RMND1', 'KCNK17', 'LRP8', 'OCLM', 'GPR179', 'MBD4', 'BACH1', 'NKX2-8', 'CREB3L2', 'TRMT1L', 'PTGS2', 'TAOK1', 'TRIM61', 'HLF', 'MED6', 'LOC392196', 'NUBPL', 'ERCC3', 'ZNF800', 'STKLD1', 'PFKM', 'KLHDC7B', 'SGIP1', 'TEKT4', 'ATG5', 'PLCXD3', 'ZNF99', 'TMEM255B', 'ARHGEF2', 'EGFEM1P', 'MRPL13', 'QTRTD1', 'MUM1L1', 'ABCB10', 'EPM2AIP1', 'KRT24', 'SUZ12', 'CEP76', 'LYZ', 'ACIN1', 'SELM', 'GPATCH8', 'LOC100132111', 'IPO5', 'CTAG2', 'MTM1', 'LDLR', 'MKKS', 'TMEM200B', 'LMCD1', 'LY6G6C', 'TSTA3', 'ZNF83', 'TDRG1', 'ZNF296', 'GATA3-AS1', 'FGF4', 'GIN1', 'NEIL3', 'FHOD3', 'TADA1', 'KLHL26', 'TMEM53', 'RIPK1', 'CMPK2', 'SH3GLB1', 'DYNLL2', 'C4ORF29', 'ZDHHC6', 'THAP9', 'CLEC12B', 'MCMDC2', 'DEFB105A', 'MC4R', 'LMF1', 'DMXL1', 'MUL1', 'EXOSC1', 'ARMCX1', 'C1QTNF2', 'ZFAND2B', 'ARNTL', 'GLUD1', 'MAP1S', 'NUFIP2', 'PABPC3', 'SPTB', 'NDUFA9', 'SLITRK5', 'GNB4', 'FAM63B', 'LEP', 'PEAR1', 'PXDN', 'NGLY1', 'NLRP12', 'ARFGEF3', 'PLEC', 'TPP1', 'UQCRFS1', 'SYNGR3', 'ATP6AP2', 'PRSS3', 'TWF2', 'CPNE9', 'RTN4R', 'SNORD50A', 'ADORA1', 'TAF10', 'AQP4-AS1', 'CHD8', 'CLEC4A', 'ZNF30', 'OR52H1', 'GDAP1L1', 'KCNJ6', 'AQP12A', 'GHRH', 'HILS1', 'DHH', 'LINC00320', 'TCERG1', 'MYO9B', 'CSN1S2AP', 'PRMT5', 'CACNG1', 'DBI', 'ANKMY2', 'MCOLN3', 'SCARNA15', 'SNORD42B', 'THSD4', 'SKIV2L', 'POP5', 'ABR', 'UNQ6494', 'SDHAF2', 'HOOK3', 'KCNE3', 'S100G', 'CCDC88C', 'RELN', 'SNAI2', 'NKTR', 'ZNF641', 'RPS26P11', 'CDS2', 'ITIH1', 'FAM171B', 'CHD5', 'RLN3', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.7245719259542289 Spearman Correlation: 0.7134586132093497 Coefficient of Determination: 0.525004475881021 RMSE: 0.3231725374870623 NRMSE: 0.08721499229168292 MAPE: 249.28142112588597 Pearson Correlation: 0.1731439854327249 Spearman Correlation: 0.23629471689173187 Coefficient of Determination: -1.8490569993272752 RMSE: 0.7038089832980717 NRMSE: 0.34052417376191274 MAPE: 388.6056456094517 Predictor: ElasticNet Pearson Correlation: 0.7034414760210242 Spearman Correlation: 0.6970043424203402 Coefficient of Determination: 0.49469394248600396 RMSE: 0.33332427399832826 NRMSE: 0.08995465460476762 MAPE: 262.7698420935549 Pearson Correlation: 0.2264778591562077 Spearman Correlation: 0.25353682714248316 Coefficient of Determination: -0.9574608192386891 RMSE: 0.583378978609457 NRMSE: 0.28225647781611396 MAPE: 335.5874475334391 Predictor: RandomForests Pearson Correlation: 0.5323163080091166 Spearman Correlation: 0.5375604331173618 Coefficient of Determination: 0.261591164489236 RMSE: 0.40293791229077236 NRMSE: 0.1087413775555523 MAPE: 251.461288224735 Pearson Correlation: 0.546637284906212 Spearman Correlation: 0.5554857292484944 Coefficient of Determination: 0.24776761074989206 RMSE: 0.3616431566330084 NRMSE: 0.17497394894283466 MAPE: 225.69893301150924
N Most Variable Genes
ZScore
scenario = Scenario.NMostVariableGenes_Mutations
normalizeTechnique = NormalizeTechnique.ZScore
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.648331 | 0.348611 | 0.770359 | -0.860535 | -0.0703 | -0.190586 | 0.719543 | 0.931178 | -0.283665 | -0.568745 | ... | 0.238689 | -0.239582 | -0.271725 | -0.222943 | -0.211122 | 0.792968 | -0.619672 | -0.946953 | -0.457066 | 0.454464 |
| TCGA-A1-A0SH-01 | -0.757220 | -0.562180 | -0.708360 | -0.860535 | -0.0703 | -0.190586 | -0.527186 | -0.611509 | -0.283665 | -0.568745 | ... | 0.739490 | -0.107967 | -1.200905 | -0.903627 | 1.252346 | 0.854083 | 0.108510 | -0.031025 | 0.991113 | -0.083768 |
| TCGA-A1-A0SJ-01 | -0.405237 | 0.254851 | -0.925065 | -0.223237 | -0.0703 | -0.190586 | -0.525012 | -0.390046 | -0.283665 | 1.475888 | ... | 0.592975 | 5.821247 | -1.079296 | -0.618408 | 0.444358 | -0.369825 | -0.573411 | -0.555512 | -0.488416 | -0.083768 |
| TCGA-A1-A0SK-01 | 3.940101 | 14.857648 | -0.228301 | -0.311392 | -0.0703 | -0.004913 | -0.697917 | -0.754652 | -0.283665 | -0.568745 | ... | 0.051750 | -0.027856 | 2.390553 | 0.357970 | 1.337526 | -1.597758 | 1.043918 | 0.590450 | -0.467061 | -0.083768 |
| TCGA-A1-A0SQ-01 | -1.114818 | -1.129592 | -0.842620 | -0.860535 | -0.0703 | -0.190586 | -0.507239 | -0.137487 | -0.283665 | -0.568745 | ... | 1.412610 | -0.008283 | -0.929428 | -0.853107 | 0.062384 | -0.434733 | -1.040418 | -0.606257 | -0.580936 | -0.083768 |
5 rows × 20133 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 381 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'OR6C74', 'GYS2', 'IQCF6', 'IL13', 'ANKRD18DP', 'C10ORF53', 'LINC00469', 'LINC00696', 'LINC00895', 'CYP11B2', 'ADAM18', 'TCP10L2', 'C17ORF78', 'SNORA5B', 'FMO6P', 'PLET1', 'SCARNA11', 'LY6G6D', 'CGB5', 'POTEH', 'CLCA4', 'PLG', 'SST', 'TPD52L3', 'ZNF479', 'OR8B3', 'TMPRSS11F', 'TAAR9', 'OR2A2', 'F13B', 'SNORD89', 'OR1S2', 'OR5H14', 'ZCCHC13', 'OLAH', 'OPRD1', 'OR4D6', 'NOX3', 'LEUTX', 'VWC2L', 'EPS8L3', 'RPL13AP17', 'RAX2', 'DPPA5', 'KRTAP4-5', 'OR5T2', 'PRDM14', 'LOC285627', 'TKTL2', 'C18ORF42', 'OR10V1', 'OR2G2', 'OR8A1', 'SNORA71A', 'ZPBP', 'GPR78', 'FCAMR', 'BEND2', 'ACTRT2', 'TSGA13', 'SLC1A6', 'TTTY14', 'CST11', 'SSX5', 'STATH', 'CT45A1', 'OR5H6', 'IL26', 'LIPN', 'SPANXA2', 'OR6M1', 'ASB17', 'LINC01205', 'OR9G4', 'ACTR3BP2', 'SNORA74A', 'BARHL2', 'OR8D4', 'RTP2', 'LMNTD1', 'KLK9', 'OR4C12', 'LCNL1', 'TMEM202', 'OR11H4', 'OR2L8', 'GAGE2B', 'LOC145845', 'HNRNPCL1', 'KRTAP21-2', 'SERPINB3', 'DEFB110', 'KRT85', 'PWAR4', 'MYBPC2', 'LOC646813', 'C2ORF83', 'GPR52', 'PROP1', 'SSX8', 'LPO', 'NCOR1P1', 'SPATA31C1', 'ANKUB1', 'LINC00488', 'GOT1L1', 'OR2M4', 'LOC100129935', 'USP26', 'OR4C16', 'LINC00934', 'ZIM3', 'BPIFA3', 'DYDC1', 'FAM27B', 'COL6A4P1', 'TEX13B', 'CABS1', 'UGT2A3', 'OR4D9', 'FAM138D', 'ZAR1', 'FOXN3-AS2', 'POTED', 'CPLX4', 'SYCN', 'OR2M7', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.8411934520103701 Spearman Correlation: 0.7600145933950939 Coefficient of Determination: 0.7076064237051225 RMSE: 0.12117960033289252 NRMSE: 0.045892671968525846 MAPE: 378.1180824056791 Pearson Correlation: -0.02984260347910947 Spearman Correlation: -0.029060579455662865 Coefficient of Determination: -6.237859065848669 RMSE: 0.7545459120237885 NRMSE: 0.37275700489756025 MAPE: 1095.4149670777952 Predictor: ElasticNet Pearson Correlation: 0.5466168404925923 Spearman Correlation: 0.45582235548183775 Coefficient of Determination: 0.2466784560097569 RMSE: 0.19450725107738956 NRMSE: 0.07366303771156582 MAPE: 172.1264591594906 Pearson Correlation: 0.2515947511217702 Spearman Correlation: 0.2593600624329334 Coefficient of Determination: 0.01846554684440249 RMSE: 0.2778647039685739 NRMSE: 0.1372693340028425 MAPE: 131.10733853903403 Predictor: RandomForests Pearson Correlation: 0.5419051278137599 Spearman Correlation: 0.4427385975022923 Coefficient of Determination: 0.16867511800796864 RMSE: 0.20432946217334857 NRMSE: 0.0773828677043547 MAPE: 211.1388341570644 Pearson Correlation: 0.24448311199117975 Spearman Correlation: 0.2667761083303845 Coefficient of Determination: 0.004690517103891678 RMSE: 0.27980771202008453 NRMSE: 0.13822920914129547 MAPE: 124.96697924075883 Protein: CDH1 x_train_column_count: 887 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'OR6C74', 'GYS2', 'IQCF6', 'IL13', 'ANKRD18DP', 'C10ORF53', 'LINC00469', 'LINC00696', 'LINC00895', 'CYP11B2', 'ADAM18', 'TCP10L2', 'C17ORF78', 'SNORA5B', 'FMO6P', 'PLET1', 'SCARNA11', 'LY6G6D', 'CGB5', 'POTEH', 'CLCA4', 'PLG', 'SST', 'TPD52L3', 'ZNF479', 'OR8B3', 'TMPRSS11F', 'TAAR9', 'OR2A2', 'F13B', 'SNORD89', 'OR1S2', 'OR5H14', 'ZCCHC13', 'OLAH', 'OPRD1', 'OR4D6', 'NOX3', 'LEUTX', 'VWC2L', 'EPS8L3', 'RPL13AP17', 'RAX2', 'DPPA5', 'KRTAP4-5', 'OR5T2', 'PRDM14', 'LOC285627', 'TKTL2', 'C18ORF42', 'OR10V1', 'OR2G2', 'OR8A1', 'SNORA71A', 'ZPBP', 'GPR78', 'FCAMR', 'BEND2', 'ACTRT2', 'TSGA13', 'SLC1A6', 'TTTY14', 'CST11', 'SSX5', 'STATH', 'CT45A1', 'OR5H6', 'IL26', 'LIPN', 'SPANXA2', 'OR6M1', 'ASB17', 'LINC01205', 'OR9G4', 'ACTR3BP2', 'SNORA74A', 'BARHL2', 'OR8D4', 'RTP2', 'LMNTD1', 'KLK9', 'OR4C12', 'LCNL1', 'TMEM202', 'OR11H4', 'OR2L8', 'GAGE2B', 'LOC145845', 'HNRNPCL1', 'KRTAP21-2', 'SERPINB3', 'DEFB110', 'KRT85', 'PWAR4', 'MYBPC2', 'LOC646813', 'C2ORF83', 'GPR52', 'PROP1', 'SSX8', 'LPO', 'NCOR1P1', 'SPATA31C1', 'ANKUB1', 'LINC00488', 'GOT1L1', 'OR2M4', 'LOC100129935', 'USP26', 'OR4C16', 'LINC00934', 'ZIM3', 'BPIFA3', 'DYDC1', 'FAM27B', 'COL6A4P1', 'TEX13B', 'CABS1', 'UGT2A3', 'OR4D9', 'FAM138D', 'ZAR1', 'FOXN3-AS2', 'POTED', 'CPLX4', 'SYCN', 'OR2M7', 'GSTA5', 'HIST1H4F', 'OR2T35', 'DUXA', 'SLC32A1', 'OR4K17', 'SLC38A8', 'TBC1D3P2', 'LINC00114', 'HTR3E', 'C3ORF30', 'KRTAP19-2', 'ASB18', 'CLRN2', 'RGS8', 'TMEM72', 'RBPJL', 'TRHR', 'HBD', 'CTRB1', 'B3GNT6', 'GABRG3', 'DAOA', 'WFDC8', 'DEFB104A', 'FRMPD4', 'LINC01565', 'KRTAP6-1', 'KRTAP25-1', 'HSFY2', 'EPPIN', 'LINC00608', 'OR56A1', 'OR6Y1', 'OR7A17', 'OR8H2', 'IL31', 'FBXW12', 'ALLC', 'OR4K2', 'OR4X2', 'GRIN2B', 'PRAMEF20', 'OR8G2', 'MYF5', 'LINC01566', 'KIR3DL3', 'MMD2', 'ITIH1', 'MAGEB3', 'ABRA', 'TCERG1L', 'OR8J3', 'CYLC2', 'SLC25A31', 'FAM169B', 'LINC00113', 'LOC729609', 'BMP15', 'FAM74A3', 'CFHR4', 'DEFB126', 'DEFB129', 'DEFB134', 'OR6B3', 'OR2AT4', 'FAM170B', 'INS', 'RHAG', 'CT47A1', 'CSNK1A1P1', 'OTOP1', 'GAGE12F', 'SRY', 'NKAIN3', 'PSKH2', 'MYH1', 'CCK', 'TCP10', 'SNORA70B', 'OR52H1', 'CD200R1L', 'OR5P3', 'REG4', 'POU6F2', 'TRPV5', 'KRTAP10-3', 'GPRC6A', 'ODF3', 'SPINK1', 'SCARNA8', 'FTHL17', 'ZNF705A', 'HOXC12', 'OR6B2', 'AQP2', 'KRTAP11-1', 'OR10H2', 'OR51I2', 'SNORA47', 'ACOT12', 'LCN9', 'DISC2', 'GUCY2EP', 'FGF6', 'TFF2', 'CHIAP2', 'CXADRP2', 'SNORA38B', 'C20ORF166-AS1', 'SNORD94', 'TMEM88B', 'OR4S1', 'OR5M10', 'MGC27382', 'MBD3L5', 'CNTN5', 'PYDC2', 'SNORA59B', 'ENAM', 'FIGLA', 'CCDC37', 'PCGEM1', 'PSG11', 'OR5AN1', 'OR6F1', 'OR14I1', 'SNORD115-26', 'LOC392196', 'SNCB', 'PISRT1', 'BOLL', 'OR7C2', 'SPATA19', 'TTTY8', 'TTTY9B', 'NANOS2', 'AVPR1B', 'XAGE3', 'CNGB1', 'MOGAT3', 'OR2T12', 'NLRP8', 'KRTAP10-7', 'MAGEA1', 'SLC51B', 'CYP2C18', 'CNTNAP4', 'UGT1A4', 'TAS2R60', 'OPN1MW', 'RESP18', 'RPL3L', 'OACYLP', 'IHH', 'LRRTM1', 'SLC17A6', 'MAGEB6', 'SNAR-F', 'MAGEA5', 'CLEC4G', 'PRAMEF1', 'PRDM9', 'SPDYC', 'SPRR2C', 'GRK1', 'KRTAP2-1', 'DNTT', 'KRTAP19-6', 'FOXR1', 'OR6K6', 'APCS', 'SFTPC', 'BSX', 'NEU2', 'PAQR9', 'OR5M3', 'KCNIP4-IT1', 'SLC6A5', 'MUSK', 'PAPOLB', 'CNGA2', 'IL17F', 'SLC2A2', 'GOLGA6L1', 'C10ORF120', 'ZFY', 'F9', 'CALR3', 'ANP32D', 'KRTAP10-12', 'C11ORF94', 'CA6', 'APOA2', 'CCDC166', 'HAO1', 'LINC00304', 'DEFB123', 'PPIAL4E', 'KGFLP1', 'SFTPB', 'LINC00575', 'OR5M8', 'ALX4', 'DKFZP434K028', 'EPB42', 'HCRTR1', 'SPANXN3', 'IZUMO1R', 'KRT3', 'OR4D11', 'KRTAP3-2', 'OR52R1', 'SSX9', 'LELP1', 'CRYGB', 'FTMT', 'OTOL1', 'AWAT1', 'OR7E24', 'LINC00410', 'LINC01553', 'BTN1A1', 'KRT25', 'PLA2G12B', 'KRTAP10-11', 'SCN1A', 'OR1K1', 'C16ORF90', 'ANXA10', 'KRTAP13-1', 'GABRR3', 'PROKR2', 'CELA2B', 'MT4', 'OR12D2', 'C12ORF77', 'COX7B2', 'ALPPL2', 'ZNF679', 'FKBP6', 'FOXD4L3', 'IQCJ', 'OR1E2', 'LGALS14', 'OR4D5', 'TMEM14E', 'PRR32', 'OR2T10', 'HBE1', 'NXNL1', 'PRB4', 'LOC286238', 'LINC01591', 'AADACL3', 'PRAMEF16', 'AGXT2', 'AKR1C8P', 'TMPRSS11BNL', 'SCTR', 'BANF2', 'BTF3P11', 'RPS4Y2', 'CDX4', 'SLC36A3', 'CHAT', 'OR4K5', 'OR10W1', 'MTNR1B', 'YIPF7', 'SPACA3', 'LYZL1', 'TNP1', 'EPGN', 'NEUROD1', 'KRTAP9-2', 'SVOP', 'SLC5A8', 'ANGPTL3', 'SPRR2E', 'OR2G6', 'INSC', 'OR51B5', 'NCAN', 'OR7D4', 'OR2M3', 'PLCZ1', 'SLC10A1', 'LINC01142', 'DAW1', 'OR6A2', 'AADAC', 'NKX2-3', 'TRIM49', 'ACSM2B', 'GBA3', 'ITPK1-AS1', 'OCSTAMP', 'BCYRN1', 'CETN1', 'HIST1H3B', 'SNORA16B', 'GKN2', 'EDDM3B', 'PCSK2', 'HIST1H4B', 'FAM170A', 'HULC', 'LOC647859', 'MCF2', 'RSPH6A', 'C1ORF141', 'C1ORF94', 'OR5B17', 'OR4D10', 'CTRC', 'KRTAP1-3', 'SLC9C1', 'PTH2', 'BET1P1', 'SHH', 'GPHA2', 'OR10AG1', 'C12ORF50', 'ZSCAN10', 'LHX3', 'OR10G8', 'PRAC1', 'PSG4', 'DEFB119', 'HS3ST4', 'PRG1', 'IL3', 'GUCY2F', 'DMRT1', 'LINC00520', 'OR1M1', 'OR1N1', 'OR1S1', 'NLRP13', 'UGT2B28', 'FAM47C', 'MMP23A', 'KRT71', 'TDRG1', 'FAM138B', 'NXPE1', 'FAM150A', 'AMER3', 'PCDH8', 'GCGR', 'NPSR1-AS1', 'ARL13A', 'DRD3', 'HSD52', 'TARM1', 'TCEB3C', 'LINC00202-2', 'SH2D7', 'IGFBP1', 'OR5E1P', 'OR2B3', 'OR5H2', 'SNORA27', 'SLCO6A1', 'CALCB', 'TMEM8C', 'GABRA4', 'SNORD15B', 'LINC00479', 'LOC284798', 'CHRNB3', 'HGC6.3', 'CCKAR', 'XKR7', 'ISL1', 'MRGPRG-AS1', 'CGB8', 'SNORA36B', 'LINC00523', 'MYH7', 'CGB2', 'GUCA1C', 'NEUROG3', 'PRSS57', 'FAM71B', 'VWA5B1', 'PROKR1', 'SLCO1B7', 'VGLL2', 'UBE2DNL', 'NKX6-2', 'PRKY', 'CACNG7', 'GH1', 'CCER1', 'PPP1R2P9', 'TRPM3', 'C7ORF72', 'IL36A', 'BPIFB4', 'UGT2B10', 'USP50', 'MTVR2', 'MUC13', 'LINC00032', 'FGF23', 'OR4K1', 'KRTAP12-2', 'OR52N2', 'DEFB118', 'KRTAP1-5', 'DEFB115', 'AIRE', 'RNF151', 'EXD1', 'FGF16', 'APOA5', 'PASD1', 'SNORA77', 'OR2A14', 'POU4F3', 'SYT14P1', 'HTR1A', 'FMO9P', 'SNORD97', 'ZFAT-AS1', 'B4GALNT2', 'OLFM3', 'HMSD', 'OR2B11', 'FOXE3', 'OR10K1', 'LINC00923', 'OR1L4', 'DSCR10', 'KDM5D', 'ANKRD34C', 'CHRNA9', 'DPRX', 'POU4F2', 'KRTAP3-3', 'MYADML', 'SFTA3', 'OR52K2', 'HCRTR2', 'PTCHD3', 'LINC00710', 'OR1L1', 'MEP1A', 'FAM9B', 'SNORA2B', 'MAGEA9B', 'KRTAP12-1', 'LINC00964', 'OTC', 'GPR148', 'MYH16', 'PACRG-AS1', 'C12ORF42', 'ITLN2', 'OTOR', 'SPATA3', 'OR10AD1', 'HIST1H3F', 'LOC100129055', 'PLD5', 'LOC100132831', 'FAM83A-AS1', 'ARID3C', 'IGLL1', 'C11ORF87', 'MYL1', 'LINC00052', 'OVCH1', 'NPSR1', 'CLEC18C', 'MIR1-1HG', 'TMSB4Y', 'POM121L2', 'HRK', 'CDH10', 'VIL1', 'CLEC4M', 'SNORA64', 'SLC39A12', 'VCX3A', 'CLRN1-AS1', 'OR51F2', 'CMTM5', 'PSG3', 'HTR4', 'HPVC1', 'OR2M2', 'LOC100130264', 'C4ORF50', 'SOX3', 'HIST2H2AB', 'C7ORF57', 'ATOH7', 'AATK-AS1', 'CPA2', 'SPINK14', 'FERD3L', 'TSNAX-DISC1', 'H3F3AP5', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 5.337739660260673e-15 NRMSE: 8.972046560537665e-16 MAPE: 4.220481444560227e-12 Pearson Correlation: 0.40886723227067506 Spearman Correlation: 0.3607062725587748 Coefficient of Determination: -1.4183278646880533 RMSE: 1.8043877530734578 NRMSE: 0.2922464048902623 MAPE: 793.7362348998103 Predictor: ElasticNet Pearson Correlation: 0.909139748848752 Spearman Correlation: 0.8824165397597172 Coefficient of Determination: 0.7972576514292677 RMSE: 0.5080979444983691 NRMSE: 0.08540466012780816 MAPE: 241.57957940605752 Pearson Correlation: 0.5460718714935495 Spearman Correlation: 0.5058628426494977 Coefficient of Determination: 0.262736923043825 RMSE: 0.9962848424589645 NRMSE: 0.16136258016568375 MAPE: 379.65950776766067 Predictor: RandomForests Pearson Correlation: 0.7410476373786478 Spearman Correlation: 0.6671420838499043 Coefficient of Determination: 0.5445596962678452 RMSE: 0.7615368647578079 NRMSE: 0.12800444838179414 MAPE: 228.0975686833993 Pearson Correlation: 0.7450901497568989 Spearman Correlation: 0.7196517412935325 Coefficient of Determination: 0.5514414551326716 RMSE: 0.7771088374489301 NRMSE: 0.12586389126509184 MAPE: 124.2908335586383 Protein: CDH2 x_train_column_count: 500 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'OR6C74', 'GYS2', 'IQCF6', 'IL13', 'ANKRD18DP', 'C10ORF53', 'LINC00469', 'LINC00696', 'LINC00895', 'CYP11B2', 'ADAM18', 'TCP10L2', 'C17ORF78', 'SNORA5B', 'FMO6P', 'PLET1', 'SCARNA11', 'LY6G6D', 'CGB5', 'POTEH', 'CLCA4', 'PLG', 'SST', 'TPD52L3', 'ZNF479', 'OR8B3', 'TMPRSS11F', 'TAAR9', 'OR2A2', 'F13B', 'SNORD89', 'OR1S2', 'OR5H14', 'ZCCHC13', 'OLAH', 'OPRD1', 'OR4D6', 'NOX3', 'LEUTX', 'VWC2L', 'EPS8L3', 'RPL13AP17', 'RAX2', 'DPPA5', 'KRTAP4-5', 'OR5T2', 'PRDM14', 'LOC285627', 'TKTL2', 'C18ORF42', 'OR10V1', 'OR2G2', 'OR8A1', 'SNORA71A', 'ZPBP', 'GPR78', 'FCAMR', 'BEND2', 'ACTRT2', 'TSGA13', 'SLC1A6', 'TTTY14', 'CST11', 'SSX5', 'STATH', 'CT45A1', 'OR5H6', 'IL26', 'LIPN', 'SPANXA2', 'OR6M1', 'ASB17', 'LINC01205', 'OR9G4', 'ACTR3BP2', 'SNORA74A', 'BARHL2', 'OR8D4', 'RTP2', 'LMNTD1', 'KLK9', 'OR4C12', 'LCNL1', 'TMEM202', 'OR11H4', 'OR2L8', 'GAGE2B', 'LOC145845', 'HNRNPCL1', 'KRTAP21-2', 'SERPINB3', 'DEFB110', 'KRT85', 'PWAR4', 'MYBPC2', 'LOC646813', 'C2ORF83', 'GPR52', 'PROP1', 'SSX8', 'LPO', 'NCOR1P1', 'SPATA31C1', 'ANKUB1', 'LINC00488', 'GOT1L1', 'OR2M4', 'LOC100129935', 'USP26', 'OR4C16', 'LINC00934', 'ZIM3', 'BPIFA3', 'DYDC1', 'FAM27B', 'COL6A4P1', 'TEX13B', 'CABS1', 'UGT2A3', 'OR4D9', 'FAM138D', 'ZAR1', 'FOXN3-AS2', 'POTED', 'CPLX4', 'SYCN', 'OR2M7', 'GSTA5', 'HIST1H4F', 'OR2T35', 'DUXA', 'SLC32A1', 'OR4K17', 'SLC38A8', 'TBC1D3P2', 'LINC00114', 'HTR3E', 'C3ORF30', 'KRTAP19-2', 'ASB18', 'CLRN2', 'RGS8', 'TMEM72', 'RBPJL', 'TRHR', 'HBD', 'CTRB1', 'B3GNT6', 'GABRG3', 'DAOA', 'WFDC8', 'DEFB104A', 'FRMPD4', 'LINC01565', 'KRTAP6-1', 'KRTAP25-1', 'HSFY2', 'EPPIN', 'LINC00608', 'OR56A1', 'OR6Y1', 'OR7A17', 'OR8H2', 'IL31', 'FBXW12', 'ALLC', 'OR4K2', 'OR4X2', 'GRIN2B', 'PRAMEF20', 'OR8G2', 'MYF5', 'LINC01566', 'KIR3DL3', 'MMD2', 'ITIH1', 'MAGEB3', 'ABRA', 'TCERG1L', 'OR8J3', 'CYLC2', 'SLC25A31', 'FAM169B', 'LINC00113', 'LOC729609', 'BMP15', 'FAM74A3', 'CFHR4', 'DEFB126', 'DEFB129', 'DEFB134', 'OR6B3', 'OR2AT4', 'FAM170B', 'INS', 'RHAG', 'CT47A1', 'CSNK1A1P1', 'OTOP1', 'GAGE12F', 'SRY', 'NKAIN3', 'PSKH2', 'MYH1', 'CCK', 'TCP10', 'SNORA70B', 'OR52H1', 'CD200R1L', 'OR5P3', 'REG4', 'POU6F2', 'TRPV5', 'KRTAP10-3', 'GPRC6A', 'ODF3', 'SPINK1', 'SCARNA8', 'FTHL17', 'ZNF705A', 'HOXC12', 'OR6B2', 'AQP2', 'KRTAP11-1', 'OR10H2', 'OR51I2', 'SNORA47', 'ACOT12', 'LCN9', 'DISC2', 'GUCY2EP', 'FGF6', 'TFF2', 'CHIAP2', 'CXADRP2', 'SNORA38B', 'C20ORF166-AS1', 'SNORD94', 'TMEM88B', 'OR4S1', 'OR5M10', 'MGC27382', 'MBD3L5', 'CNTN5', 'PYDC2', 'SNORA59B', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.9579967745065195 Spearman Correlation: 0.9351227550723904 Coefficient of Determination: 0.917744117341004 RMSE: 0.10645963489061067 NRMSE: 0.039329422872398996 MAPE: 318.85264617922405 Pearson Correlation: -0.08619926139254135 Spearman Correlation: 0.1324748804994635 Coefficient of Determination: -3.684167778472828e+25 RMSE: 2276848425775.5776 NRMSE: 1175026281558.3308 MAPE: 120602204608632.17 Predictor: ElasticNet Pearson Correlation: 0.7077379168202259 Spearman Correlation: 0.6835614497592503 Coefficient of Determination: 0.43757846828761926 RMSE: 0.27837642829341047 NRMSE: 0.10284070838031027 MAPE: 577.6543033319226 Pearson Correlation: 0.24655401533451185 Spearman Correlation: 0.242483660130719 Coefficient of Determination: 0.059032858483246464 RMSE: 0.36387452278279764 NRMSE: 0.187786820861226 MAPE: 112.54157718080768 Predictor: RandomForests Pearson Correlation: 0.4972121396677837 Spearman Correlation: 0.475211979451222 Coefficient of Determination: 0.13795036275527695 RMSE: 0.34464154269642977 NRMSE: 0.1273210544638013 MAPE: 314.3476152344889 Pearson Correlation: -0.07025032758079737 Spearman Correlation: 0.10577016876402302 Coefficient of Determination: -0.02464953770560019 RMSE: 0.37971005175343414 NRMSE: 0.19595915350850707 MAPE: 100.3223933702918 Protein: CDH3 x_train_column_count: 76 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.43278986138339814 Spearman Correlation: 0.44215171137143566 Coefficient of Determination: 0.18730699337493562 RMSE: 0.18823192460131863 NRMSE: 0.1320592163392537 MAPE: 354.06981138329917 Pearson Correlation: 0.24991369470415462 Spearman Correlation: 0.3334503950834065 Coefficient of Determination: 0.02466587101137041 RMSE: 0.20204050863889084 NRMSE: 0.1546413794298481 MAPE: 287.5387909656434 Predictor: ElasticNet Pearson Correlation: 0.3629295681997352 Spearman Correlation: 0.3661702358859396 Coefficient of Determination: 0.11311169355972728 RMSE: 0.19663665865530078 NRMSE: 0.1379557856648852 MAPE: 243.52334293972325 Pearson Correlation: 0.41692256720964566 Spearman Correlation: 0.4866500829187396 Coefficient of Determination: 0.13823112927037606 RMSE: 0.1899140710862966 NRMSE: 0.14535982968848044 MAPE: 172.97383633669517 Predictor: RandomForests Pearson Correlation: 0.4591390288569147 Spearman Correlation: 0.4645694038034905 Coefficient of Determination: 0.18348616280320207 RMSE: 0.18867388666154866 NRMSE: 0.1323692868198551 MAPE: 438.6228920321647 Pearson Correlation: 0.45227375643864665 Spearman Correlation: 0.49893887025174855 Coefficient of Determination: 0.182559718194804 RMSE: 0.18496508655234523 NRMSE: 0.14157188735818724 MAPE: 318.7323231505084 Protein: PTEN x_train_column_count: 887 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'OR6C74', 'GYS2', 'IQCF6', 'IL13', 'ANKRD18DP', 'C10ORF53', 'LINC00469', 'LINC00696', 'LINC00895', 'CYP11B2', 'ADAM18', 'TCP10L2', 'C17ORF78', 'SNORA5B', 'FMO6P', 'PLET1', 'SCARNA11', 'LY6G6D', 'CGB5', 'POTEH', 'CLCA4', 'PLG', 'SST', 'TPD52L3', 'ZNF479', 'OR8B3', 'TMPRSS11F', 'TAAR9', 'OR2A2', 'F13B', 'SNORD89', 'OR1S2', 'OR5H14', 'ZCCHC13', 'OLAH', 'OPRD1', 'OR4D6', 'NOX3', 'LEUTX', 'VWC2L', 'EPS8L3', 'RPL13AP17', 'RAX2', 'DPPA5', 'KRTAP4-5', 'OR5T2', 'PRDM14', 'LOC285627', 'TKTL2', 'C18ORF42', 'OR10V1', 'OR2G2', 'OR8A1', 'SNORA71A', 'ZPBP', 'GPR78', 'FCAMR', 'BEND2', 'ACTRT2', 'TSGA13', 'SLC1A6', 'TTTY14', 'CST11', 'SSX5', 'STATH', 'CT45A1', 'OR5H6', 'IL26', 'LIPN', 'SPANXA2', 'OR6M1', 'ASB17', 'LINC01205', 'OR9G4', 'ACTR3BP2', 'SNORA74A', 'BARHL2', 'OR8D4', 'RTP2', 'LMNTD1', 'KLK9', 'OR4C12', 'LCNL1', 'TMEM202', 'OR11H4', 'OR2L8', 'GAGE2B', 'LOC145845', 'HNRNPCL1', 'KRTAP21-2', 'SERPINB3', 'DEFB110', 'KRT85', 'PWAR4', 'MYBPC2', 'LOC646813', 'C2ORF83', 'GPR52', 'PROP1', 'SSX8', 'LPO', 'NCOR1P1', 'SPATA31C1', 'ANKUB1', 'LINC00488', 'GOT1L1', 'OR2M4', 'LOC100129935', 'USP26', 'OR4C16', 'LINC00934', 'ZIM3', 'BPIFA3', 'DYDC1', 'FAM27B', 'COL6A4P1', 'TEX13B', 'CABS1', 'UGT2A3', 'OR4D9', 'FAM138D', 'ZAR1', 'FOXN3-AS2', 'POTED', 'CPLX4', 'SYCN', 'OR2M7', 'GSTA5', 'HIST1H4F', 'OR2T35', 'DUXA', 'SLC32A1', 'OR4K17', 'SLC38A8', 'TBC1D3P2', 'LINC00114', 'HTR3E', 'C3ORF30', 'KRTAP19-2', 'ASB18', 'CLRN2', 'RGS8', 'TMEM72', 'RBPJL', 'TRHR', 'HBD', 'CTRB1', 'B3GNT6', 'GABRG3', 'DAOA', 'WFDC8', 'DEFB104A', 'FRMPD4', 'LINC01565', 'KRTAP6-1', 'KRTAP25-1', 'HSFY2', 'EPPIN', 'LINC00608', 'OR56A1', 'OR6Y1', 'OR7A17', 'OR8H2', 'IL31', 'FBXW12', 'ALLC', 'OR4K2', 'OR4X2', 'GRIN2B', 'PRAMEF20', 'OR8G2', 'MYF5', 'LINC01566', 'KIR3DL3', 'MMD2', 'ITIH1', 'MAGEB3', 'ABRA', 'TCERG1L', 'OR8J3', 'CYLC2', 'SLC25A31', 'FAM169B', 'LINC00113', 'LOC729609', 'BMP15', 'FAM74A3', 'CFHR4', 'DEFB126', 'DEFB129', 'DEFB134', 'OR6B3', 'OR2AT4', 'FAM170B', 'INS', 'RHAG', 'CT47A1', 'CSNK1A1P1', 'OTOP1', 'GAGE12F', 'SRY', 'NKAIN3', 'PSKH2', 'MYH1', 'CCK', 'TCP10', 'SNORA70B', 'OR52H1', 'CD200R1L', 'OR5P3', 'REG4', 'POU6F2', 'TRPV5', 'KRTAP10-3', 'GPRC6A', 'ODF3', 'SPINK1', 'SCARNA8', 'FTHL17', 'ZNF705A', 'HOXC12', 'OR6B2', 'AQP2', 'KRTAP11-1', 'OR10H2', 'OR51I2', 'SNORA47', 'ACOT12', 'LCN9', 'DISC2', 'GUCY2EP', 'FGF6', 'TFF2', 'CHIAP2', 'CXADRP2', 'SNORA38B', 'C20ORF166-AS1', 'SNORD94', 'TMEM88B', 'OR4S1', 'OR5M10', 'MGC27382', 'MBD3L5', 'CNTN5', 'PYDC2', 'SNORA59B', 'ENAM', 'FIGLA', 'CCDC37', 'PCGEM1', 'PSG11', 'OR5AN1', 'OR6F1', 'OR14I1', 'SNORD115-26', 'LOC392196', 'SNCB', 'PISRT1', 'BOLL', 'OR7C2', 'SPATA19', 'TTTY8', 'TTTY9B', 'NANOS2', 'AVPR1B', 'XAGE3', 'CNGB1', 'MOGAT3', 'OR2T12', 'NLRP8', 'KRTAP10-7', 'MAGEA1', 'SLC51B', 'CYP2C18', 'CNTNAP4', 'UGT1A4', 'TAS2R60', 'OPN1MW', 'RESP18', 'RPL3L', 'OACYLP', 'IHH', 'LRRTM1', 'SLC17A6', 'MAGEB6', 'SNAR-F', 'MAGEA5', 'CLEC4G', 'PRAMEF1', 'PRDM9', 'SPDYC', 'SPRR2C', 'GRK1', 'KRTAP2-1', 'DNTT', 'KRTAP19-6', 'FOXR1', 'OR6K6', 'APCS', 'SFTPC', 'BSX', 'NEU2', 'PAQR9', 'OR5M3', 'KCNIP4-IT1', 'SLC6A5', 'MUSK', 'PAPOLB', 'CNGA2', 'IL17F', 'SLC2A2', 'GOLGA6L1', 'C10ORF120', 'ZFY', 'F9', 'CALR3', 'ANP32D', 'KRTAP10-12', 'C11ORF94', 'CA6', 'APOA2', 'CCDC166', 'HAO1', 'LINC00304', 'DEFB123', 'PPIAL4E', 'KGFLP1', 'SFTPB', 'LINC00575', 'OR5M8', 'ALX4', 'DKFZP434K028', 'EPB42', 'HCRTR1', 'SPANXN3', 'IZUMO1R', 'KRT3', 'OR4D11', 'KRTAP3-2', 'OR52R1', 'SSX9', 'LELP1', 'CRYGB', 'FTMT', 'OTOL1', 'AWAT1', 'OR7E24', 'LINC00410', 'LINC01553', 'BTN1A1', 'KRT25', 'PLA2G12B', 'KRTAP10-11', 'SCN1A', 'OR1K1', 'C16ORF90', 'ANXA10', 'KRTAP13-1', 'GABRR3', 'PROKR2', 'CELA2B', 'MT4', 'OR12D2', 'C12ORF77', 'COX7B2', 'ALPPL2', 'ZNF679', 'FKBP6', 'FOXD4L3', 'IQCJ', 'OR1E2', 'LGALS14', 'OR4D5', 'TMEM14E', 'PRR32', 'OR2T10', 'HBE1', 'NXNL1', 'PRB4', 'LOC286238', 'LINC01591', 'AADACL3', 'PRAMEF16', 'AGXT2', 'AKR1C8P', 'TMPRSS11BNL', 'SCTR', 'BANF2', 'BTF3P11', 'RPS4Y2', 'CDX4', 'SLC36A3', 'CHAT', 'OR4K5', 'OR10W1', 'MTNR1B', 'YIPF7', 'SPACA3', 'LYZL1', 'TNP1', 'EPGN', 'NEUROD1', 'KRTAP9-2', 'SVOP', 'SLC5A8', 'ANGPTL3', 'SPRR2E', 'OR2G6', 'INSC', 'OR51B5', 'NCAN', 'OR7D4', 'OR2M3', 'PLCZ1', 'SLC10A1', 'LINC01142', 'DAW1', 'OR6A2', 'AADAC', 'NKX2-3', 'TRIM49', 'ACSM2B', 'GBA3', 'ITPK1-AS1', 'OCSTAMP', 'BCYRN1', 'CETN1', 'HIST1H3B', 'SNORA16B', 'GKN2', 'EDDM3B', 'PCSK2', 'HIST1H4B', 'FAM170A', 'HULC', 'LOC647859', 'MCF2', 'RSPH6A', 'C1ORF141', 'C1ORF94', 'OR5B17', 'OR4D10', 'CTRC', 'KRTAP1-3', 'SLC9C1', 'PTH2', 'BET1P1', 'SHH', 'GPHA2', 'OR10AG1', 'C12ORF50', 'ZSCAN10', 'LHX3', 'OR10G8', 'PRAC1', 'PSG4', 'DEFB119', 'HS3ST4', 'PRG1', 'IL3', 'GUCY2F', 'DMRT1', 'LINC00520', 'OR1M1', 'OR1N1', 'OR1S1', 'NLRP13', 'UGT2B28', 'FAM47C', 'MMP23A', 'KRT71', 'TDRG1', 'FAM138B', 'NXPE1', 'FAM150A', 'AMER3', 'PCDH8', 'GCGR', 'NPSR1-AS1', 'ARL13A', 'DRD3', 'HSD52', 'TARM1', 'TCEB3C', 'LINC00202-2', 'SH2D7', 'IGFBP1', 'OR5E1P', 'OR2B3', 'OR5H2', 'SNORA27', 'SLCO6A1', 'CALCB', 'TMEM8C', 'GABRA4', 'SNORD15B', 'LINC00479', 'LOC284798', 'CHRNB3', 'HGC6.3', 'CCKAR', 'XKR7', 'ISL1', 'MRGPRG-AS1', 'CGB8', 'SNORA36B', 'LINC00523', 'MYH7', 'CGB2', 'GUCA1C', 'NEUROG3', 'PRSS57', 'FAM71B', 'VWA5B1', 'PROKR1', 'SLCO1B7', 'VGLL2', 'UBE2DNL', 'NKX6-2', 'PRKY', 'CACNG7', 'GH1', 'CCER1', 'PPP1R2P9', 'TRPM3', 'C7ORF72', 'IL36A', 'BPIFB4', 'UGT2B10', 'USP50', 'MTVR2', 'MUC13', 'LINC00032', 'FGF23', 'OR4K1', 'KRTAP12-2', 'OR52N2', 'DEFB118', 'KRTAP1-5', 'DEFB115', 'AIRE', 'RNF151', 'EXD1', 'FGF16', 'APOA5', 'PASD1', 'SNORA77', 'OR2A14', 'POU4F3', 'SYT14P1', 'HTR1A', 'FMO9P', 'SNORD97', 'ZFAT-AS1', 'B4GALNT2', 'OLFM3', 'HMSD', 'OR2B11', 'FOXE3', 'OR10K1', 'LINC00923', 'OR1L4', 'DSCR10', 'KDM5D', 'ANKRD34C', 'CHRNA9', 'DPRX', 'POU4F2', 'KRTAP3-3', 'MYADML', 'SFTA3', 'OR52K2', 'HCRTR2', 'PTCHD3', 'LINC00710', 'OR1L1', 'MEP1A', 'FAM9B', 'SNORA2B', 'MAGEA9B', 'KRTAP12-1', 'LINC00964', 'OTC', 'GPR148', 'MYH16', 'PACRG-AS1', 'C12ORF42', 'ITLN2', 'OTOR', 'SPATA3', 'OR10AD1', 'HIST1H3F', 'LOC100129055', 'PLD5', 'LOC100132831', 'FAM83A-AS1', 'ARID3C', 'IGLL1', 'C11ORF87', 'MYL1', 'LINC00052', 'OVCH1', 'NPSR1', 'CLEC18C', 'MIR1-1HG', 'TMSB4Y', 'POM121L2', 'HRK', 'CDH10', 'VIL1', 'CLEC4M', 'SNORA64', 'SLC39A12', 'VCX3A', 'CLRN1-AS1', 'OR51F2', 'CMTM5', 'PSG3', 'HTR4', 'HPVC1', 'OR2M2', 'LOC100130264', 'C4ORF50', 'SOX3', 'HIST2H2AB', 'C7ORF57', 'ATOH7', 'AATK-AS1', 'CPA2', 'SPINK14', 'FERD3L', 'TSNAX-DISC1', 'H3F3AP5', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 2.9414934892578465e-15 NRMSE: 4.599317472062929e-16 MAPE: 3.4261785915893195e-12 Pearson Correlation: 0.11791291291736289 Spearman Correlation: 0.12402204662959714 Coefficient of Determination: -5.318845966079896 RMSE: 1.2484858149403077 NRMSE: 0.4114711670095273 MAPE: 825.783277638138 Predictor: ElasticNet Pearson Correlation: 0.8677550957683017 Spearman Correlation: 0.8342443872928353 Coefficient of Determination: 0.7019876705113256 RMSE: 0.34199539104182186 NRMSE: 0.053474379023035236 MAPE: 223.4273963747917 Pearson Correlation: 0.1815566676704098 Spearman Correlation: 0.24180567749487858 Coefficient of Determination: -0.19699525296737885 RMSE: 0.5433891243855056 NRMSE: 0.17908810374579973 MAPE: 241.56215016844712 Predictor: RandomForests Pearson Correlation: 0.5567177836800383 Spearman Correlation: 0.5690105742001648 Coefficient of Determination: 0.27438764964832274 RMSE: 0.5336487176451035 NRMSE: 0.08344128178330129 MAPE: 331.84142849353003 Pearson Correlation: 0.3528423848300199 Spearman Correlation: 0.38409263566959884 Coefficient of Determination: 0.12209540563237598 RMSE: 0.465359290758827 NRMSE: 0.1533713304194934 MAPE: 184.41860789206314 Protein: BRCA2 x_train_column_count: 381 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'OR6C74', 'GYS2', 'IQCF6', 'IL13', 'ANKRD18DP', 'C10ORF53', 'LINC00469', 'LINC00696', 'LINC00895', 'CYP11B2', 'ADAM18', 'TCP10L2', 'C17ORF78', 'SNORA5B', 'FMO6P', 'PLET1', 'SCARNA11', 'LY6G6D', 'CGB5', 'POTEH', 'CLCA4', 'PLG', 'SST', 'TPD52L3', 'ZNF479', 'OR8B3', 'TMPRSS11F', 'TAAR9', 'OR2A2', 'F13B', 'SNORD89', 'OR1S2', 'OR5H14', 'ZCCHC13', 'OLAH', 'OPRD1', 'OR4D6', 'NOX3', 'LEUTX', 'VWC2L', 'EPS8L3', 'RPL13AP17', 'RAX2', 'DPPA5', 'KRTAP4-5', 'OR5T2', 'PRDM14', 'LOC285627', 'TKTL2', 'C18ORF42', 'OR10V1', 'OR2G2', 'OR8A1', 'SNORA71A', 'ZPBP', 'GPR78', 'FCAMR', 'BEND2', 'ACTRT2', 'TSGA13', 'SLC1A6', 'TTTY14', 'CST11', 'SSX5', 'STATH', 'CT45A1', 'OR5H6', 'IL26', 'LIPN', 'SPANXA2', 'OR6M1', 'ASB17', 'LINC01205', 'OR9G4', 'ACTR3BP2', 'SNORA74A', 'BARHL2', 'OR8D4', 'RTP2', 'LMNTD1', 'KLK9', 'OR4C12', 'LCNL1', 'TMEM202', 'OR11H4', 'OR2L8', 'GAGE2B', 'LOC145845', 'HNRNPCL1', 'KRTAP21-2', 'SERPINB3', 'DEFB110', 'KRT85', 'PWAR4', 'MYBPC2', 'LOC646813', 'C2ORF83', 'GPR52', 'PROP1', 'SSX8', 'LPO', 'NCOR1P1', 'SPATA31C1', 'ANKUB1', 'LINC00488', 'GOT1L1', 'OR2M4', 'LOC100129935', 'USP26', 'OR4C16', 'LINC00934', 'ZIM3', 'BPIFA3', 'DYDC1', 'FAM27B', 'COL6A4P1', 'TEX13B', 'CABS1', 'UGT2A3', 'OR4D9', 'FAM138D', 'ZAR1', 'FOXN3-AS2', 'POTED', 'CPLX4', 'SYCN', 'OR2M7', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.8527612426195912 Spearman Correlation: 0.8049255115481659 Coefficient of Determination: 0.7272017369141095 RMSE: 0.10321252786738497 NRMSE: 0.0667670603207179 MAPE: 239.57078602833678 Pearson Correlation: 0.046693670372669624 Spearman Correlation: 0.01416936660981276 Coefficient of Determination: -6.650209066049573 RMSE: 0.5109578239786687 NRMSE: 0.5113669175126789 MAPE: 669.754600628527 Predictor: ElasticNet Pearson Correlation: 0.5624790928603375 Spearman Correlation: 0.40555023321672895 Coefficient of Determination: 0.2516196291863765 RMSE: 0.17095145771470624 NRMSE: 0.11058663638020665 MAPE: 134.30233676147208 Pearson Correlation: 0.0214790000062923 Spearman Correlation: 0.021317458439995413 Coefficient of Determination: -0.04903664109380079 RMSE: 0.18920984526476162 NRMSE: 0.18936133433222743 MAPE: 126.1659197028393 Predictor: RandomForests Pearson Correlation: 0.4941063922527787 Spearman Correlation: 0.4445798585312635 Coefficient of Determination: 0.1289571050101378 RMSE: 0.1844299233467572 NRMSE: 0.11930570902071158 MAPE: 133.1532824526627 Pearson Correlation: -0.109735822424622 Spearman Correlation: 0.02161499075090714 Coefficient of Determination: -0.03149869907185798 RMSE: 0.18762156059928556 NRMSE: 0.18777177802170295 MAPE: 111.7411405566032 Protein: CDKN2A x_train_column_count: 627 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'OR6C74', 'GYS2', 'IQCF6', 'IL13', 'ANKRD18DP', 'C10ORF53', 'LINC00469', 'LINC00696', 'LINC00895', 'CYP11B2', 'ADAM18', 'TCP10L2', 'C17ORF78', 'SNORA5B', 'FMO6P', 'PLET1', 'SCARNA11', 'LY6G6D', 'CGB5', 'POTEH', 'CLCA4', 'PLG', 'SST', 'TPD52L3', 'ZNF479', 'OR8B3', 'TMPRSS11F', 'TAAR9', 'OR2A2', 'F13B', 'SNORD89', 'OR1S2', 'OR5H14', 'ZCCHC13', 'OLAH', 'OPRD1', 'OR4D6', 'NOX3', 'LEUTX', 'VWC2L', 'EPS8L3', 'RPL13AP17', 'RAX2', 'DPPA5', 'KRTAP4-5', 'OR5T2', 'PRDM14', 'LOC285627', 'TKTL2', 'C18ORF42', 'OR10V1', 'OR2G2', 'OR8A1', 'SNORA71A', 'ZPBP', 'GPR78', 'FCAMR', 'BEND2', 'ACTRT2', 'TSGA13', 'SLC1A6', 'TTTY14', 'CST11', 'SSX5', 'STATH', 'CT45A1', 'OR5H6', 'IL26', 'LIPN', 'SPANXA2', 'OR6M1', 'ASB17', 'LINC01205', 'OR9G4', 'ACTR3BP2', 'SNORA74A', 'BARHL2', 'OR8D4', 'RTP2', 'LMNTD1', 'KLK9', 'OR4C12', 'LCNL1', 'TMEM202', 'OR11H4', 'OR2L8', 'GAGE2B', 'LOC145845', 'HNRNPCL1', 'KRTAP21-2', 'SERPINB3', 'DEFB110', 'KRT85', 'PWAR4', 'MYBPC2', 'LOC646813', 'C2ORF83', 'GPR52', 'PROP1', 'SSX8', 'LPO', 'NCOR1P1', 'SPATA31C1', 'ANKUB1', 'LINC00488', 'GOT1L1', 'OR2M4', 'LOC100129935', 'USP26', 'OR4C16', 'LINC00934', 'ZIM3', 'BPIFA3', 'DYDC1', 'FAM27B', 'COL6A4P1', 'TEX13B', 'CABS1', 'UGT2A3', 'OR4D9', 'FAM138D', 'ZAR1', 'FOXN3-AS2', 'POTED', 'CPLX4', 'SYCN', 'OR2M7', 'GSTA5', 'HIST1H4F', 'OR2T35', 'DUXA', 'SLC32A1', 'OR4K17', 'SLC38A8', 'TBC1D3P2', 'LINC00114', 'HTR3E', 'C3ORF30', 'KRTAP19-2', 'ASB18', 'CLRN2', 'RGS8', 'TMEM72', 'RBPJL', 'TRHR', 'HBD', 'CTRB1', 'B3GNT6', 'GABRG3', 'DAOA', 'WFDC8', 'DEFB104A', 'FRMPD4', 'LINC01565', 'KRTAP6-1', 'KRTAP25-1', 'HSFY2', 'EPPIN', 'LINC00608', 'OR56A1', 'OR6Y1', 'OR7A17', 'OR8H2', 'IL31', 'FBXW12', 'ALLC', 'OR4K2', 'OR4X2', 'GRIN2B', 'PRAMEF20', 'OR8G2', 'MYF5', 'LINC01566', 'KIR3DL3', 'MMD2', 'ITIH1', 'MAGEB3', 'ABRA', 'TCERG1L', 'OR8J3', 'CYLC2', 'SLC25A31', 'FAM169B', 'LINC00113', 'LOC729609', 'BMP15', 'FAM74A3', 'CFHR4', 'DEFB126', 'DEFB129', 'DEFB134', 'OR6B3', 'OR2AT4', 'FAM170B', 'INS', 'RHAG', 'CT47A1', 'CSNK1A1P1', 'OTOP1', 'GAGE12F', 'SRY', 'NKAIN3', 'PSKH2', 'MYH1', 'CCK', 'TCP10', 'SNORA70B', 'OR52H1', 'CD200R1L', 'OR5P3', 'REG4', 'POU6F2', 'TRPV5', 'KRTAP10-3', 'GPRC6A', 'ODF3', 'SPINK1', 'SCARNA8', 'FTHL17', 'ZNF705A', 'HOXC12', 'OR6B2', 'AQP2', 'KRTAP11-1', 'OR10H2', 'OR51I2', 'SNORA47', 'ACOT12', 'LCN9', 'DISC2', 'GUCY2EP', 'FGF6', 'TFF2', 'CHIAP2', 'CXADRP2', 'SNORA38B', 'C20ORF166-AS1', 'SNORD94', 'TMEM88B', 'OR4S1', 'OR5M10', 'MGC27382', 'MBD3L5', 'CNTN5', 'PYDC2', 'SNORA59B', 'ENAM', 'FIGLA', 'CCDC37', 'PCGEM1', 'PSG11', 'OR5AN1', 'OR6F1', 'OR14I1', 'SNORD115-26', 'LOC392196', 'SNCB', 'PISRT1', 'BOLL', 'OR7C2', 'SPATA19', 'TTTY8', 'TTTY9B', 'NANOS2', 'AVPR1B', 'XAGE3', 'CNGB1', 'MOGAT3', 'OR2T12', 'NLRP8', 'KRTAP10-7', 'MAGEA1', 'SLC51B', 'CYP2C18', 'CNTNAP4', 'UGT1A4', 'TAS2R60', 'OPN1MW', 'RESP18', 'RPL3L', 'OACYLP', 'IHH', 'LRRTM1', 'SLC17A6', 'MAGEB6', 'SNAR-F', 'MAGEA5', 'CLEC4G', 'PRAMEF1', 'PRDM9', 'SPDYC', 'SPRR2C', 'GRK1', 'KRTAP2-1', 'DNTT', 'KRTAP19-6', 'FOXR1', 'OR6K6', 'APCS', 'SFTPC', 'BSX', 'NEU2', 'PAQR9', 'OR5M3', 'KCNIP4-IT1', 'SLC6A5', 'MUSK', 'PAPOLB', 'CNGA2', 'IL17F', 'SLC2A2', 'GOLGA6L1', 'C10ORF120', 'ZFY', 'F9', 'CALR3', 'ANP32D', 'KRTAP10-12', 'C11ORF94', 'CA6', 'APOA2', 'CCDC166', 'HAO1', 'LINC00304', 'DEFB123', 'PPIAL4E', 'KGFLP1', 'SFTPB', 'LINC00575', 'OR5M8', 'ALX4', 'DKFZP434K028', 'EPB42', 'HCRTR1', 'SPANXN3', 'IZUMO1R', 'KRT3', 'OR4D11', 'KRTAP3-2', 'OR52R1', 'SSX9', 'LELP1', 'CRYGB', 'FTMT', 'OTOL1', 'AWAT1', 'OR7E24', 'LINC00410', 'LINC01553', 'BTN1A1', 'KRT25', 'PLA2G12B', 'KRTAP10-11', 'SCN1A', 'OR1K1', 'C16ORF90', 'ANXA10', 'KRTAP13-1', 'GABRR3', 'PROKR2', 'CELA2B', 'MT4', 'OR12D2', 'C12ORF77', 'COX7B2', 'ALPPL2', 'ZNF679', 'FKBP6', 'FOXD4L3', 'IQCJ', 'OR1E2', 'LGALS14', 'OR4D5', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 9.803125114187287e-15 NRMSE: 2.2161467422148265e-15 MAPE: 6.440550083955966e-12 Pearson Correlation: 0.16423934729584824 Spearman Correlation: 0.03741586186713492 Coefficient of Determination: -16.837759598876673 RMSE: 3.15436688537908 NRMSE: 0.8518409088250284 MAPE: 1663.2872379731446 Predictor: ElasticNet Pearson Correlation: 0.8348105451567075 Spearman Correlation: 0.7893268980427343 Coefficient of Determination: 0.6631434816715647 RMSE: 0.37302740235822285 NRMSE: 0.08432856388792197 MAPE: 150.40601438523868 Pearson Correlation: 0.539398615985128 Spearman Correlation: 0.3973514779045947 Coefficient of Determination: 0.2853979413039647 RMSE: 0.6313558124512325 NRMSE: 0.17049846407000607 MAPE: 316.5893959878376 Predictor: RandomForests Pearson Correlation: 0.6323225890702777 Spearman Correlation: 0.5432925122292004 Coefficient of Determination: 0.3950958958465238 RMSE: 0.4998751227128747 NRMSE: 0.11300443601511803 MAPE: 214.9924346795375 Pearson Correlation: 0.6770255177612925 Spearman Correlation: 0.5542299670467452 Coefficient of Determination: 0.4376688749707317 RMSE: 0.5600645866586008 NRMSE: 0.15124617517110472 MAPE: 452.9783269038752 Protein: TP53 x_train_column_count: 1002 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'OR6C74', 'GYS2', 'IQCF6', 'IL13', 'ANKRD18DP', 'C10ORF53', 'LINC00469', 'LINC00696', 'LINC00895', 'CYP11B2', 'ADAM18', 'TCP10L2', 'C17ORF78', 'SNORA5B', 'FMO6P', 'PLET1', 'SCARNA11', 'LY6G6D', 'CGB5', 'POTEH', 'CLCA4', 'PLG', 'SST', 'TPD52L3', 'ZNF479', 'OR8B3', 'TMPRSS11F', 'TAAR9', 'OR2A2', 'F13B', 'SNORD89', 'OR1S2', 'OR5H14', 'ZCCHC13', 'OLAH', 'OPRD1', 'OR4D6', 'NOX3', 'LEUTX', 'VWC2L', 'EPS8L3', 'RPL13AP17', 'RAX2', 'DPPA5', 'KRTAP4-5', 'OR5T2', 'PRDM14', 'LOC285627', 'TKTL2', 'C18ORF42', 'OR10V1', 'OR2G2', 'OR8A1', 'SNORA71A', 'ZPBP', 'GPR78', 'FCAMR', 'BEND2', 'ACTRT2', 'TSGA13', 'SLC1A6', 'TTTY14', 'CST11', 'SSX5', 'STATH', 'CT45A1', 'OR5H6', 'IL26', 'LIPN', 'SPANXA2', 'OR6M1', 'ASB17', 'LINC01205', 'OR9G4', 'ACTR3BP2', 'SNORA74A', 'BARHL2', 'OR8D4', 'RTP2', 'LMNTD1', 'KLK9', 'OR4C12', 'LCNL1', 'TMEM202', 'OR11H4', 'OR2L8', 'GAGE2B', 'LOC145845', 'HNRNPCL1', 'KRTAP21-2', 'SERPINB3', 'DEFB110', 'KRT85', 'PWAR4', 'MYBPC2', 'LOC646813', 'C2ORF83', 'GPR52', 'PROP1', 'SSX8', 'LPO', 'NCOR1P1', 'SPATA31C1', 'ANKUB1', 'LINC00488', 'GOT1L1', 'OR2M4', 'LOC100129935', 'USP26', 'OR4C16', 'LINC00934', 'ZIM3', 'BPIFA3', 'DYDC1', 'FAM27B', 'COL6A4P1', 'TEX13B', 'CABS1', 'UGT2A3', 'OR4D9', 'FAM138D', 'ZAR1', 'FOXN3-AS2', 'POTED', 'CPLX4', 'SYCN', 'OR2M7', 'GSTA5', 'HIST1H4F', 'OR2T35', 'DUXA', 'SLC32A1', 'OR4K17', 'SLC38A8', 'TBC1D3P2', 'LINC00114', 'HTR3E', 'C3ORF30', 'KRTAP19-2', 'ASB18', 'CLRN2', 'RGS8', 'TMEM72', 'RBPJL', 'TRHR', 'HBD', 'CTRB1', 'B3GNT6', 'GABRG3', 'DAOA', 'WFDC8', 'DEFB104A', 'FRMPD4', 'LINC01565', 'KRTAP6-1', 'KRTAP25-1', 'HSFY2', 'EPPIN', 'LINC00608', 'OR56A1', 'OR6Y1', 'OR7A17', 'OR8H2', 'IL31', 'FBXW12', 'ALLC', 'OR4K2', 'OR4X2', 'GRIN2B', 'PRAMEF20', 'OR8G2', 'MYF5', 'LINC01566', 'KIR3DL3', 'MMD2', 'ITIH1', 'MAGEB3', 'ABRA', 'TCERG1L', 'OR8J3', 'CYLC2', 'SLC25A31', 'FAM169B', 'LINC00113', 'LOC729609', 'BMP15', 'FAM74A3', 'CFHR4', 'DEFB126', 'DEFB129', 'DEFB134', 'OR6B3', 'OR2AT4', 'FAM170B', 'INS', 'RHAG', 'CT47A1', 'CSNK1A1P1', 'OTOP1', 'GAGE12F', 'SRY', 'NKAIN3', 'PSKH2', 'MYH1', 'CCK', 'TCP10', 'SNORA70B', 'OR52H1', 'CD200R1L', 'OR5P3', 'REG4', 'POU6F2', 'TRPV5', 'KRTAP10-3', 'GPRC6A', 'ODF3', 'SPINK1', 'SCARNA8', 'FTHL17', 'ZNF705A', 'HOXC12', 'OR6B2', 'AQP2', 'KRTAP11-1', 'OR10H2', 'OR51I2', 'SNORA47', 'ACOT12', 'LCN9', 'DISC2', 'GUCY2EP', 'FGF6', 'TFF2', 'CHIAP2', 'CXADRP2', 'SNORA38B', 'C20ORF166-AS1', 'SNORD94', 'TMEM88B', 'OR4S1', 'OR5M10', 'MGC27382', 'MBD3L5', 'CNTN5', 'PYDC2', 'SNORA59B', 'ENAM', 'FIGLA', 'CCDC37', 'PCGEM1', 'PSG11', 'OR5AN1', 'OR6F1', 'OR14I1', 'SNORD115-26', 'LOC392196', 'SNCB', 'PISRT1', 'BOLL', 'OR7C2', 'SPATA19', 'TTTY8', 'TTTY9B', 'NANOS2', 'AVPR1B', 'XAGE3', 'CNGB1', 'MOGAT3', 'OR2T12', 'NLRP8', 'KRTAP10-7', 'MAGEA1', 'SLC51B', 'CYP2C18', 'CNTNAP4', 'UGT1A4', 'TAS2R60', 'OPN1MW', 'RESP18', 'RPL3L', 'OACYLP', 'IHH', 'LRRTM1', 'SLC17A6', 'MAGEB6', 'SNAR-F', 'MAGEA5', 'CLEC4G', 'PRAMEF1', 'PRDM9', 'SPDYC', 'SPRR2C', 'GRK1', 'KRTAP2-1', 'DNTT', 'KRTAP19-6', 'FOXR1', 'OR6K6', 'APCS', 'SFTPC', 'BSX', 'NEU2', 'PAQR9', 'OR5M3', 'KCNIP4-IT1', 'SLC6A5', 'MUSK', 'PAPOLB', 'CNGA2', 'IL17F', 'SLC2A2', 'GOLGA6L1', 'C10ORF120', 'ZFY', 'F9', 'CALR3', 'ANP32D', 'KRTAP10-12', 'C11ORF94', 'CA6', 'APOA2', 'CCDC166', 'HAO1', 'LINC00304', 'DEFB123', 'PPIAL4E', 'KGFLP1', 'SFTPB', 'LINC00575', 'OR5M8', 'ALX4', 'DKFZP434K028', 'EPB42', 'HCRTR1', 'SPANXN3', 'IZUMO1R', 'KRT3', 'OR4D11', 'KRTAP3-2', 'OR52R1', 'SSX9', 'LELP1', 'CRYGB', 'FTMT', 'OTOL1', 'AWAT1', 'OR7E24', 'LINC00410', 'LINC01553', 'BTN1A1', 'KRT25', 'PLA2G12B', 'KRTAP10-11', 'SCN1A', 'OR1K1', 'C16ORF90', 'ANXA10', 'KRTAP13-1', 'GABRR3', 'PROKR2', 'CELA2B', 'MT4', 'OR12D2', 'C12ORF77', 'COX7B2', 'ALPPL2', 'ZNF679', 'FKBP6', 'FOXD4L3', 'IQCJ', 'OR1E2', 'LGALS14', 'OR4D5', 'TMEM14E', 'PRR32', 'OR2T10', 'HBE1', 'NXNL1', 'PRB4', 'LOC286238', 'LINC01591', 'AADACL3', 'PRAMEF16', 'AGXT2', 'AKR1C8P', 'TMPRSS11BNL', 'SCTR', 'BANF2', 'BTF3P11', 'RPS4Y2', 'CDX4', 'SLC36A3', 'CHAT', 'OR4K5', 'OR10W1', 'MTNR1B', 'YIPF7', 'SPACA3', 'LYZL1', 'TNP1', 'EPGN', 'NEUROD1', 'KRTAP9-2', 'SVOP', 'SLC5A8', 'ANGPTL3', 'SPRR2E', 'OR2G6', 'INSC', 'OR51B5', 'NCAN', 'OR7D4', 'OR2M3', 'PLCZ1', 'SLC10A1', 'LINC01142', 'DAW1', 'OR6A2', 'AADAC', 'NKX2-3', 'TRIM49', 'ACSM2B', 'GBA3', 'ITPK1-AS1', 'OCSTAMP', 'BCYRN1', 'CETN1', 'HIST1H3B', 'SNORA16B', 'GKN2', 'EDDM3B', 'PCSK2', 'HIST1H4B', 'FAM170A', 'HULC', 'LOC647859', 'MCF2', 'RSPH6A', 'C1ORF141', 'C1ORF94', 'OR5B17', 'OR4D10', 'CTRC', 'KRTAP1-3', 'SLC9C1', 'PTH2', 'BET1P1', 'SHH', 'GPHA2', 'OR10AG1', 'C12ORF50', 'ZSCAN10', 'LHX3', 'OR10G8', 'PRAC1', 'PSG4', 'DEFB119', 'HS3ST4', 'PRG1', 'IL3', 'GUCY2F', 'DMRT1', 'LINC00520', 'OR1M1', 'OR1N1', 'OR1S1', 'NLRP13', 'UGT2B28', 'FAM47C', 'MMP23A', 'KRT71', 'TDRG1', 'FAM138B', 'NXPE1', 'FAM150A', 'AMER3', 'PCDH8', 'GCGR', 'NPSR1-AS1', 'ARL13A', 'DRD3', 'HSD52', 'TARM1', 'TCEB3C', 'LINC00202-2', 'SH2D7', 'IGFBP1', 'OR5E1P', 'OR2B3', 'OR5H2', 'SNORA27', 'SLCO6A1', 'CALCB', 'TMEM8C', 'GABRA4', 'SNORD15B', 'LINC00479', 'LOC284798', 'CHRNB3', 'HGC6.3', 'CCKAR', 'XKR7', 'ISL1', 'MRGPRG-AS1', 'CGB8', 'SNORA36B', 'LINC00523', 'MYH7', 'CGB2', 'GUCA1C', 'NEUROG3', 'PRSS57', 'FAM71B', 'VWA5B1', 'PROKR1', 'SLCO1B7', 'VGLL2', 'UBE2DNL', 'NKX6-2', 'PRKY', 'CACNG7', 'GH1', 'CCER1', 'PPP1R2P9', 'TRPM3', 'C7ORF72', 'IL36A', 'BPIFB4', 'UGT2B10', 'USP50', 'MTVR2', 'MUC13', 'LINC00032', 'FGF23', 'OR4K1', 'KRTAP12-2', 'OR52N2', 'DEFB118', 'KRTAP1-5', 'DEFB115', 'AIRE', 'RNF151', 'EXD1', 'FGF16', 'APOA5', 'PASD1', 'SNORA77', 'OR2A14', 'POU4F3', 'SYT14P1', 'HTR1A', 'FMO9P', 'SNORD97', 'ZFAT-AS1', 'B4GALNT2', 'OLFM3', 'HMSD', 'OR2B11', 'FOXE3', 'OR10K1', 'LINC00923', 'OR1L4', 'DSCR10', 'KDM5D', 'ANKRD34C', 'CHRNA9', 'DPRX', 'POU4F2', 'KRTAP3-3', 'MYADML', 'SFTA3', 'OR52K2', 'HCRTR2', 'PTCHD3', 'LINC00710', 'OR1L1', 'MEP1A', 'FAM9B', 'SNORA2B', 'MAGEA9B', 'KRTAP12-1', 'LINC00964', 'OTC', 'GPR148', 'MYH16', 'PACRG-AS1', 'C12ORF42', 'ITLN2', 'OTOR', 'SPATA3', 'OR10AD1', 'HIST1H3F', 'LOC100129055', 'PLD5', 'LOC100132831', 'FAM83A-AS1', 'ARID3C', 'IGLL1', 'C11ORF87', 'MYL1', 'LINC00052', 'OVCH1', 'NPSR1', 'CLEC18C', 'MIR1-1HG', 'TMSB4Y', 'POM121L2', 'HRK', 'CDH10', 'VIL1', 'CLEC4M', 'SNORA64', 'SLC39A12', 'VCX3A', 'CLRN1-AS1', 'OR51F2', 'CMTM5', 'PSG3', 'HTR4', 'HPVC1', 'OR2M2', 'LOC100130264', 'C4ORF50', 'SOX3', 'HIST2H2AB', 'C7ORF57', 'ATOH7', 'AATK-AS1', 'CPA2', 'SPINK14', 'FERD3L', 'TSNAX-DISC1', 'H3F3AP5', 'OR5AR1', 'KRTAP4-8', 'CYP2W1', 'C15ORF43', 'C20ORF144', 'NF1P2', 'KLK12', 'DEFB108B', 'IFNA21', 'OR13C3', 'PPP1R3A', 'PRSS48', 'ADGRG7', 'ADAMTS20', 'CACNG3', 'KRTAP10-1', 'SNORA68', 'MBL2', 'PGA4', 'CXCL6', 'SLC12A1', 'COL20A1', 'KRT18P55', 'PRKAG3', 'S100A7', 'KRT73', 'LINC01101', 'LOC100130417', 'CELP', 'SNORA44', 'CLCA3P', 'LRRC30', 'TMPRSS11B', 'KRTAP7-1', 'SCARNA1', 'XIRP2', 'MCHR2', 'MMP21', 'PTX4', 'FAM19A1', 'MGC16025', 'SLURP1', 'TBX20', 'CCDC54', 'FFAR1', 'KRTAP5-2', 'FER1L6', 'HSFY1P1', 'GSX2', 'PPY2P', 'HTR6', 'NEUROD6', 'NUTM1', 'C2ORF27B', 'HEATR9', 'OR2T2', 'SLC28A2', 'HTR2C', 'KCNJ13', 'LINC01548', 'MYL2', 'FEZF1', 'MYH4', 'TMPRSS7', 'TMEM212', 'LINC00691', 'PRO0611', 'BARHL1', 'LOC285629', 'PATE3', 'SNORA72', 'OR5M1', 'TSHB', 'HILS1', 'C1ORF140', 'RFPL1', 'SNORA61', 'CDH19', 'SNORA5C', 'LOC644669', 'NYAP2', 'CLRN1', 'SALL3', 'GRM7', 'GCKR', 'TPTE2', 'ADGRE3', 'LRRC52', 'LRRIQ4', 'WFDC6', 'KRT12', 'CAPZA3', 'FAM71E2', 'C14ORF178', 'ADH6', 'PRTN3', 'LRRC74A', 'OR12D3', 'FNDC9', 'C5ORF47', 'A1CF', 'OR10R2', 'ZIC5', 'C12ORF56', 'PAGE2', 'C9ORF171', 'FSHR', 'OPRM1', 'OR4F17', 'KAAG1', 'CTXN3', 'CTRB2', 'OR5K1', 'FRG2DP', 'CAPNS2', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.7811161181824987e-15 NRMSE: 4.2805001638608484e-16 MAPE: 4.227794765386803e-12 Pearson Correlation: 0.3779560698548651 Spearman Correlation: 0.2939664422983124 Coefficient of Determination: -1.2810577581713214 RMSE: 0.6352961434577297 NRMSE: 0.22844983403133148 MAPE: 1693.5058027270998 Predictor: ElasticNet Pearson Correlation: 0.8680673599596158 Spearman Correlation: 0.7526445637403373 Coefficient of Determination: 0.7107299568919734 RMSE: 0.24354371044646209 NRMSE: 0.05853009143149775 MAPE: 588.9178402922262 Pearson Correlation: 0.4821668778220998 Spearman Correlation: 0.4061457418788411 Coefficient of Determination: 0.21444179361831628 RMSE: 0.3728183352490532 NRMSE: 0.13406391285161395 MAPE: 427.76531867217227 Predictor: RandomForests Pearson Correlation: 0.641750399243109 Spearman Correlation: 0.518312831192323 Coefficient of Determination: 0.36581217871663707 RMSE: 0.3606069868599514 NRMSE: 0.08666353925978165 MAPE: 526.0549284913765 Pearson Correlation: 0.4614351569825657 Spearman Correlation: 0.4689536427317829 Coefficient of Determination: 0.21154376488556337 RMSE: 0.3735053903918798 NRMSE: 0.13431097500517092 MAPE: 498.46629482419286 Protein: CTNNB1 x_train_column_count: 1002 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'OR6C74', 'GYS2', 'IQCF6', 'IL13', 'ANKRD18DP', 'C10ORF53', 'LINC00469', 'LINC00696', 'LINC00895', 'CYP11B2', 'ADAM18', 'TCP10L2', 'C17ORF78', 'SNORA5B', 'FMO6P', 'PLET1', 'SCARNA11', 'LY6G6D', 'CGB5', 'POTEH', 'CLCA4', 'PLG', 'SST', 'TPD52L3', 'ZNF479', 'OR8B3', 'TMPRSS11F', 'TAAR9', 'OR2A2', 'F13B', 'SNORD89', 'OR1S2', 'OR5H14', 'ZCCHC13', 'OLAH', 'OPRD1', 'OR4D6', 'NOX3', 'LEUTX', 'VWC2L', 'EPS8L3', 'RPL13AP17', 'RAX2', 'DPPA5', 'KRTAP4-5', 'OR5T2', 'PRDM14', 'LOC285627', 'TKTL2', 'C18ORF42', 'OR10V1', 'OR2G2', 'OR8A1', 'SNORA71A', 'ZPBP', 'GPR78', 'FCAMR', 'BEND2', 'ACTRT2', 'TSGA13', 'SLC1A6', 'TTTY14', 'CST11', 'SSX5', 'STATH', 'CT45A1', 'OR5H6', 'IL26', 'LIPN', 'SPANXA2', 'OR6M1', 'ASB17', 'LINC01205', 'OR9G4', 'ACTR3BP2', 'SNORA74A', 'BARHL2', 'OR8D4', 'RTP2', 'LMNTD1', 'KLK9', 'OR4C12', 'LCNL1', 'TMEM202', 'OR11H4', 'OR2L8', 'GAGE2B', 'LOC145845', 'HNRNPCL1', 'KRTAP21-2', 'SERPINB3', 'DEFB110', 'KRT85', 'PWAR4', 'MYBPC2', 'LOC646813', 'C2ORF83', 'GPR52', 'PROP1', 'SSX8', 'LPO', 'NCOR1P1', 'SPATA31C1', 'ANKUB1', 'LINC00488', 'GOT1L1', 'OR2M4', 'LOC100129935', 'USP26', 'OR4C16', 'LINC00934', 'ZIM3', 'BPIFA3', 'DYDC1', 'FAM27B', 'COL6A4P1', 'TEX13B', 'CABS1', 'UGT2A3', 'OR4D9', 'FAM138D', 'ZAR1', 'FOXN3-AS2', 'POTED', 'CPLX4', 'SYCN', 'OR2M7', 'GSTA5', 'HIST1H4F', 'OR2T35', 'DUXA', 'SLC32A1', 'OR4K17', 'SLC38A8', 'TBC1D3P2', 'LINC00114', 'HTR3E', 'C3ORF30', 'KRTAP19-2', 'ASB18', 'CLRN2', 'RGS8', 'TMEM72', 'RBPJL', 'TRHR', 'HBD', 'CTRB1', 'B3GNT6', 'GABRG3', 'DAOA', 'WFDC8', 'DEFB104A', 'FRMPD4', 'LINC01565', 'KRTAP6-1', 'KRTAP25-1', 'HSFY2', 'EPPIN', 'LINC00608', 'OR56A1', 'OR6Y1', 'OR7A17', 'OR8H2', 'IL31', 'FBXW12', 'ALLC', 'OR4K2', 'OR4X2', 'GRIN2B', 'PRAMEF20', 'OR8G2', 'MYF5', 'LINC01566', 'KIR3DL3', 'MMD2', 'ITIH1', 'MAGEB3', 'ABRA', 'TCERG1L', 'OR8J3', 'CYLC2', 'SLC25A31', 'FAM169B', 'LINC00113', 'LOC729609', 'BMP15', 'FAM74A3', 'CFHR4', 'DEFB126', 'DEFB129', 'DEFB134', 'OR6B3', 'OR2AT4', 'FAM170B', 'INS', 'RHAG', 'CT47A1', 'CSNK1A1P1', 'OTOP1', 'GAGE12F', 'SRY', 'NKAIN3', 'PSKH2', 'MYH1', 'CCK', 'TCP10', 'SNORA70B', 'OR52H1', 'CD200R1L', 'OR5P3', 'REG4', 'POU6F2', 'TRPV5', 'KRTAP10-3', 'GPRC6A', 'ODF3', 'SPINK1', 'SCARNA8', 'FTHL17', 'ZNF705A', 'HOXC12', 'OR6B2', 'AQP2', 'KRTAP11-1', 'OR10H2', 'OR51I2', 'SNORA47', 'ACOT12', 'LCN9', 'DISC2', 'GUCY2EP', 'FGF6', 'TFF2', 'CHIAP2', 'CXADRP2', 'SNORA38B', 'C20ORF166-AS1', 'SNORD94', 'TMEM88B', 'OR4S1', 'OR5M10', 'MGC27382', 'MBD3L5', 'CNTN5', 'PYDC2', 'SNORA59B', 'ENAM', 'FIGLA', 'CCDC37', 'PCGEM1', 'PSG11', 'OR5AN1', 'OR6F1', 'OR14I1', 'SNORD115-26', 'LOC392196', 'SNCB', 'PISRT1', 'BOLL', 'OR7C2', 'SPATA19', 'TTTY8', 'TTTY9B', 'NANOS2', 'AVPR1B', 'XAGE3', 'CNGB1', 'MOGAT3', 'OR2T12', 'NLRP8', 'KRTAP10-7', 'MAGEA1', 'SLC51B', 'CYP2C18', 'CNTNAP4', 'UGT1A4', 'TAS2R60', 'OPN1MW', 'RESP18', 'RPL3L', 'OACYLP', 'IHH', 'LRRTM1', 'SLC17A6', 'MAGEB6', 'SNAR-F', 'MAGEA5', 'CLEC4G', 'PRAMEF1', 'PRDM9', 'SPDYC', 'SPRR2C', 'GRK1', 'KRTAP2-1', 'DNTT', 'KRTAP19-6', 'FOXR1', 'OR6K6', 'APCS', 'SFTPC', 'BSX', 'NEU2', 'PAQR9', 'OR5M3', 'KCNIP4-IT1', 'SLC6A5', 'MUSK', 'PAPOLB', 'CNGA2', 'IL17F', 'SLC2A2', 'GOLGA6L1', 'C10ORF120', 'ZFY', 'F9', 'CALR3', 'ANP32D', 'KRTAP10-12', 'C11ORF94', 'CA6', 'APOA2', 'CCDC166', 'HAO1', 'LINC00304', 'DEFB123', 'PPIAL4E', 'KGFLP1', 'SFTPB', 'LINC00575', 'OR5M8', 'ALX4', 'DKFZP434K028', 'EPB42', 'HCRTR1', 'SPANXN3', 'IZUMO1R', 'KRT3', 'OR4D11', 'KRTAP3-2', 'OR52R1', 'SSX9', 'LELP1', 'CRYGB', 'FTMT', 'OTOL1', 'AWAT1', 'OR7E24', 'LINC00410', 'LINC01553', 'BTN1A1', 'KRT25', 'PLA2G12B', 'KRTAP10-11', 'SCN1A', 'OR1K1', 'C16ORF90', 'ANXA10', 'KRTAP13-1', 'GABRR3', 'PROKR2', 'CELA2B', 'MT4', 'OR12D2', 'C12ORF77', 'COX7B2', 'ALPPL2', 'ZNF679', 'FKBP6', 'FOXD4L3', 'IQCJ', 'OR1E2', 'LGALS14', 'OR4D5', 'TMEM14E', 'PRR32', 'OR2T10', 'HBE1', 'NXNL1', 'PRB4', 'LOC286238', 'LINC01591', 'AADACL3', 'PRAMEF16', 'AGXT2', 'AKR1C8P', 'TMPRSS11BNL', 'SCTR', 'BANF2', 'BTF3P11', 'RPS4Y2', 'CDX4', 'SLC36A3', 'CHAT', 'OR4K5', 'OR10W1', 'MTNR1B', 'YIPF7', 'SPACA3', 'LYZL1', 'TNP1', 'EPGN', 'NEUROD1', 'KRTAP9-2', 'SVOP', 'SLC5A8', 'ANGPTL3', 'SPRR2E', 'OR2G6', 'INSC', 'OR51B5', 'NCAN', 'OR7D4', 'OR2M3', 'PLCZ1', 'SLC10A1', 'LINC01142', 'DAW1', 'OR6A2', 'AADAC', 'NKX2-3', 'TRIM49', 'ACSM2B', 'GBA3', 'ITPK1-AS1', 'OCSTAMP', 'BCYRN1', 'CETN1', 'HIST1H3B', 'SNORA16B', 'GKN2', 'EDDM3B', 'PCSK2', 'HIST1H4B', 'FAM170A', 'HULC', 'LOC647859', 'MCF2', 'RSPH6A', 'C1ORF141', 'C1ORF94', 'OR5B17', 'OR4D10', 'CTRC', 'KRTAP1-3', 'SLC9C1', 'PTH2', 'BET1P1', 'SHH', 'GPHA2', 'OR10AG1', 'C12ORF50', 'ZSCAN10', 'LHX3', 'OR10G8', 'PRAC1', 'PSG4', 'DEFB119', 'HS3ST4', 'PRG1', 'IL3', 'GUCY2F', 'DMRT1', 'LINC00520', 'OR1M1', 'OR1N1', 'OR1S1', 'NLRP13', 'UGT2B28', 'FAM47C', 'MMP23A', 'KRT71', 'TDRG1', 'FAM138B', 'NXPE1', 'FAM150A', 'AMER3', 'PCDH8', 'GCGR', 'NPSR1-AS1', 'ARL13A', 'DRD3', 'HSD52', 'TARM1', 'TCEB3C', 'LINC00202-2', 'SH2D7', 'IGFBP1', 'OR5E1P', 'OR2B3', 'OR5H2', 'SNORA27', 'SLCO6A1', 'CALCB', 'TMEM8C', 'GABRA4', 'SNORD15B', 'LINC00479', 'LOC284798', 'CHRNB3', 'HGC6.3', 'CCKAR', 'XKR7', 'ISL1', 'MRGPRG-AS1', 'CGB8', 'SNORA36B', 'LINC00523', 'MYH7', 'CGB2', 'GUCA1C', 'NEUROG3', 'PRSS57', 'FAM71B', 'VWA5B1', 'PROKR1', 'SLCO1B7', 'VGLL2', 'UBE2DNL', 'NKX6-2', 'PRKY', 'CACNG7', 'GH1', 'CCER1', 'PPP1R2P9', 'TRPM3', 'C7ORF72', 'IL36A', 'BPIFB4', 'UGT2B10', 'USP50', 'MTVR2', 'MUC13', 'LINC00032', 'FGF23', 'OR4K1', 'KRTAP12-2', 'OR52N2', 'DEFB118', 'KRTAP1-5', 'DEFB115', 'AIRE', 'RNF151', 'EXD1', 'FGF16', 'APOA5', 'PASD1', 'SNORA77', 'OR2A14', 'POU4F3', 'SYT14P1', 'HTR1A', 'FMO9P', 'SNORD97', 'ZFAT-AS1', 'B4GALNT2', 'OLFM3', 'HMSD', 'OR2B11', 'FOXE3', 'OR10K1', 'LINC00923', 'OR1L4', 'DSCR10', 'KDM5D', 'ANKRD34C', 'CHRNA9', 'DPRX', 'POU4F2', 'KRTAP3-3', 'MYADML', 'SFTA3', 'OR52K2', 'HCRTR2', 'PTCHD3', 'LINC00710', 'OR1L1', 'MEP1A', 'FAM9B', 'SNORA2B', 'MAGEA9B', 'KRTAP12-1', 'LINC00964', 'OTC', 'GPR148', 'MYH16', 'PACRG-AS1', 'C12ORF42', 'ITLN2', 'OTOR', 'SPATA3', 'OR10AD1', 'HIST1H3F', 'LOC100129055', 'PLD5', 'LOC100132831', 'FAM83A-AS1', 'ARID3C', 'IGLL1', 'C11ORF87', 'MYL1', 'LINC00052', 'OVCH1', 'NPSR1', 'CLEC18C', 'MIR1-1HG', 'TMSB4Y', 'POM121L2', 'HRK', 'CDH10', 'VIL1', 'CLEC4M', 'SNORA64', 'SLC39A12', 'VCX3A', 'CLRN1-AS1', 'OR51F2', 'CMTM5', 'PSG3', 'HTR4', 'HPVC1', 'OR2M2', 'LOC100130264', 'C4ORF50', 'SOX3', 'HIST2H2AB', 'C7ORF57', 'ATOH7', 'AATK-AS1', 'CPA2', 'SPINK14', 'FERD3L', 'TSNAX-DISC1', 'H3F3AP5', 'OR5AR1', 'KRTAP4-8', 'CYP2W1', 'C15ORF43', 'C20ORF144', 'NF1P2', 'KLK12', 'DEFB108B', 'IFNA21', 'OR13C3', 'PPP1R3A', 'PRSS48', 'ADGRG7', 'ADAMTS20', 'CACNG3', 'KRTAP10-1', 'SNORA68', 'MBL2', 'PGA4', 'CXCL6', 'SLC12A1', 'COL20A1', 'KRT18P55', 'PRKAG3', 'S100A7', 'KRT73', 'LINC01101', 'LOC100130417', 'CELP', 'SNORA44', 'CLCA3P', 'LRRC30', 'TMPRSS11B', 'KRTAP7-1', 'SCARNA1', 'XIRP2', 'MCHR2', 'MMP21', 'PTX4', 'FAM19A1', 'MGC16025', 'SLURP1', 'TBX20', 'CCDC54', 'FFAR1', 'KRTAP5-2', 'FER1L6', 'HSFY1P1', 'GSX2', 'PPY2P', 'HTR6', 'NEUROD6', 'NUTM1', 'C2ORF27B', 'HEATR9', 'OR2T2', 'SLC28A2', 'HTR2C', 'KCNJ13', 'LINC01548', 'MYL2', 'FEZF1', 'MYH4', 'TMPRSS7', 'TMEM212', 'LINC00691', 'PRO0611', 'BARHL1', 'LOC285629', 'PATE3', 'SNORA72', 'OR5M1', 'TSHB', 'HILS1', 'C1ORF140', 'RFPL1', 'SNORA61', 'CDH19', 'SNORA5C', 'LOC644669', 'NYAP2', 'CLRN1', 'SALL3', 'GRM7', 'GCKR', 'TPTE2', 'ADGRE3', 'LRRC52', 'LRRIQ4', 'WFDC6', 'KRT12', 'CAPZA3', 'FAM71E2', 'C14ORF178', 'ADH6', 'PRTN3', 'LRRC74A', 'OR12D3', 'FNDC9', 'C5ORF47', 'A1CF', 'OR10R2', 'ZIC5', 'C12ORF56', 'PAGE2', 'C9ORF171', 'FSHR', 'OPRM1', 'OR4F17', 'KAAG1', 'CTXN3', 'CTRB2', 'OR5K1', 'FRG2DP', 'CAPNS2', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 3.947977000566632e-15 NRMSE: 7.956903884891534e-16 MAPE: 3.5603132810827935e-12 Pearson Correlation: 0.27269172898732946 Spearman Correlation: 0.2576236464735148 Coefficient of Determination: -2.0721752549068677 RMSE: 1.3162503718165306 NRMSE: 0.3265643754816977 MAPE: 797.7032032831576 Predictor: ElasticNet Pearson Correlation: 0.8792757937027341 Spearman Correlation: 0.8830628059030176 Coefficient of Determination: 0.722208092331891 RMSE: 0.3885669316993077 NRMSE: 0.07831326595709288 MAPE: 215.9553304458755 Pearson Correlation: 0.28433439057008136 Spearman Correlation: 0.26749097649009856 Coefficient of Determination: 0.0006506429405107594 RMSE: 0.7507134245952714 NRMSE: 0.18625351674571314 MAPE: 262.30595395059066 Predictor: RandomForests Pearson Correlation: 0.5977801955491041 Spearman Correlation: 0.5760015944865297 Coefficient of Determination: 0.18928163661016506 RMSE: 0.6638058080366055 NRMSE: 0.13378596207682963 MAPE: 555.2554119705992 Pearson Correlation: 0.44360238056235424 Spearman Correlation: 0.40000487757291975 Coefficient of Determination: 0.10915491354411755 RMSE: 0.7087884108818361 NRMSE: 0.17585183617373 MAPE: 299.3884024264422 Protein: CCNE1 x_train_column_count: 360 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'OR6C74', 'GYS2', 'IQCF6', 'IL13', 'ANKRD18DP', 'C10ORF53', 'LINC00469', 'LINC00696', 'LINC00895', 'CYP11B2', 'ADAM18', 'TCP10L2', 'C17ORF78', 'SNORA5B', 'FMO6P', 'PLET1', 'SCARNA11', 'LY6G6D', 'CGB5', 'POTEH', 'CLCA4', 'PLG', 'SST', 'TPD52L3', 'ZNF479', 'OR8B3', 'TMPRSS11F', 'TAAR9', 'OR2A2', 'F13B', 'SNORD89', 'OR1S2', 'OR5H14', 'ZCCHC13', 'OLAH', 'OPRD1', 'OR4D6', 'NOX3', 'LEUTX', 'VWC2L', 'EPS8L3', 'RPL13AP17', 'RAX2', 'DPPA5', 'KRTAP4-5', 'OR5T2', 'PRDM14', 'LOC285627', 'TKTL2', 'C18ORF42', 'OR10V1', 'OR2G2', 'OR8A1', 'SNORA71A', 'ZPBP', 'GPR78', 'FCAMR', 'BEND2', 'ACTRT2', 'TSGA13', 'SLC1A6', 'TTTY14', 'CST11', 'SSX5', 'STATH', 'CT45A1', 'OR5H6', 'IL26', 'LIPN', 'SPANXA2', 'OR6M1', 'ASB17', 'LINC01205', 'OR9G4', 'ACTR3BP2', 'SNORA74A', 'BARHL2', 'OR8D4', 'RTP2', 'LMNTD1', 'KLK9', 'OR4C12', 'LCNL1', 'TMEM202', 'OR11H4', 'OR2L8', 'GAGE2B', 'LOC145845', 'HNRNPCL1', 'KRTAP21-2', 'SERPINB3', 'DEFB110', 'KRT85', 'PWAR4', 'MYBPC2', 'LOC646813', 'C2ORF83', 'GPR52', 'PROP1', 'SSX8', 'LPO', 'NCOR1P1', 'SPATA31C1', 'ANKUB1', 'LINC00488', 'GOT1L1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.9315220251728643 Spearman Correlation: 0.8290471110101992 Coefficient of Determination: 0.867724821704849 RMSE: 0.1759095308926796 NRMSE: 0.042452284405888364 MAPE: 44.13639963093557 Pearson Correlation: 0.013101416707518748 Spearman Correlation: 0.44558091893473806 Coefficient of Determination: -1.1091203553173894e+22 RMSE: 56558253185.446556 NRMSE: 20145415204.077133 MAPE: 1307455060579.0044 Predictor: ElasticNet Pearson Correlation: 0.843599961874434 Spearman Correlation: 0.7256764372493484 Coefficient of Determination: 0.6980421856865682 RMSE: 0.26578063164382737 NRMSE: 0.06414089621445264 MAPE: 75.23897559698905 Pearson Correlation: 0.7411297650204647 Spearman Correlation: 0.6721002828992294 Coefficient of Determination: 0.4898802545087212 RMSE: 0.38356830816906073 NRMSE: 0.13662272775389517 MAPE: 53.28031061195738 Predictor: RandomForests Pearson Correlation: 0.857140341317151 Spearman Correlation: 0.7209735045074233 Coefficient of Determination: 0.7288472560993999 RMSE: 0.2518588374917151 NRMSE: 0.06078114667850354 MAPE: 55.482965968994066 Pearson Correlation: 0.8363508170956581 Spearman Correlation: 0.7070328769701888 Coefficient of Determination: 0.6968742623635448 RMSE: 0.29567734930535144 NRMSE: 0.10531695433850452 MAPE: 43.9216388427058 Protein: CCND1 x_train_column_count: 887 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'OR6C74', 'GYS2', 'IQCF6', 'IL13', 'ANKRD18DP', 'C10ORF53', 'LINC00469', 'LINC00696', 'LINC00895', 'CYP11B2', 'ADAM18', 'TCP10L2', 'C17ORF78', 'SNORA5B', 'FMO6P', 'PLET1', 'SCARNA11', 'LY6G6D', 'CGB5', 'POTEH', 'CLCA4', 'PLG', 'SST', 'TPD52L3', 'ZNF479', 'OR8B3', 'TMPRSS11F', 'TAAR9', 'OR2A2', 'F13B', 'SNORD89', 'OR1S2', 'OR5H14', 'ZCCHC13', 'OLAH', 'OPRD1', 'OR4D6', 'NOX3', 'LEUTX', 'VWC2L', 'EPS8L3', 'RPL13AP17', 'RAX2', 'DPPA5', 'KRTAP4-5', 'OR5T2', 'PRDM14', 'LOC285627', 'TKTL2', 'C18ORF42', 'OR10V1', 'OR2G2', 'OR8A1', 'SNORA71A', 'ZPBP', 'GPR78', 'FCAMR', 'BEND2', 'ACTRT2', 'TSGA13', 'SLC1A6', 'TTTY14', 'CST11', 'SSX5', 'STATH', 'CT45A1', 'OR5H6', 'IL26', 'LIPN', 'SPANXA2', 'OR6M1', 'ASB17', 'LINC01205', 'OR9G4', 'ACTR3BP2', 'SNORA74A', 'BARHL2', 'OR8D4', 'RTP2', 'LMNTD1', 'KLK9', 'OR4C12', 'LCNL1', 'TMEM202', 'OR11H4', 'OR2L8', 'GAGE2B', 'LOC145845', 'HNRNPCL1', 'KRTAP21-2', 'SERPINB3', 'DEFB110', 'KRT85', 'PWAR4', 'MYBPC2', 'LOC646813', 'C2ORF83', 'GPR52', 'PROP1', 'SSX8', 'LPO', 'NCOR1P1', 'SPATA31C1', 'ANKUB1', 'LINC00488', 'GOT1L1', 'OR2M4', 'LOC100129935', 'USP26', 'OR4C16', 'LINC00934', 'ZIM3', 'BPIFA3', 'DYDC1', 'FAM27B', 'COL6A4P1', 'TEX13B', 'CABS1', 'UGT2A3', 'OR4D9', 'FAM138D', 'ZAR1', 'FOXN3-AS2', 'POTED', 'CPLX4', 'SYCN', 'OR2M7', 'GSTA5', 'HIST1H4F', 'OR2T35', 'DUXA', 'SLC32A1', 'OR4K17', 'SLC38A8', 'TBC1D3P2', 'LINC00114', 'HTR3E', 'C3ORF30', 'KRTAP19-2', 'ASB18', 'CLRN2', 'RGS8', 'TMEM72', 'RBPJL', 'TRHR', 'HBD', 'CTRB1', 'B3GNT6', 'GABRG3', 'DAOA', 'WFDC8', 'DEFB104A', 'FRMPD4', 'LINC01565', 'KRTAP6-1', 'KRTAP25-1', 'HSFY2', 'EPPIN', 'LINC00608', 'OR56A1', 'OR6Y1', 'OR7A17', 'OR8H2', 'IL31', 'FBXW12', 'ALLC', 'OR4K2', 'OR4X2', 'GRIN2B', 'PRAMEF20', 'OR8G2', 'MYF5', 'LINC01566', 'KIR3DL3', 'MMD2', 'ITIH1', 'MAGEB3', 'ABRA', 'TCERG1L', 'OR8J3', 'CYLC2', 'SLC25A31', 'FAM169B', 'LINC00113', 'LOC729609', 'BMP15', 'FAM74A3', 'CFHR4', 'DEFB126', 'DEFB129', 'DEFB134', 'OR6B3', 'OR2AT4', 'FAM170B', 'INS', 'RHAG', 'CT47A1', 'CSNK1A1P1', 'OTOP1', 'GAGE12F', 'SRY', 'NKAIN3', 'PSKH2', 'MYH1', 'CCK', 'TCP10', 'SNORA70B', 'OR52H1', 'CD200R1L', 'OR5P3', 'REG4', 'POU6F2', 'TRPV5', 'KRTAP10-3', 'GPRC6A', 'ODF3', 'SPINK1', 'SCARNA8', 'FTHL17', 'ZNF705A', 'HOXC12', 'OR6B2', 'AQP2', 'KRTAP11-1', 'OR10H2', 'OR51I2', 'SNORA47', 'ACOT12', 'LCN9', 'DISC2', 'GUCY2EP', 'FGF6', 'TFF2', 'CHIAP2', 'CXADRP2', 'SNORA38B', 'C20ORF166-AS1', 'SNORD94', 'TMEM88B', 'OR4S1', 'OR5M10', 'MGC27382', 'MBD3L5', 'CNTN5', 'PYDC2', 'SNORA59B', 'ENAM', 'FIGLA', 'CCDC37', 'PCGEM1', 'PSG11', 'OR5AN1', 'OR6F1', 'OR14I1', 'SNORD115-26', 'LOC392196', 'SNCB', 'PISRT1', 'BOLL', 'OR7C2', 'SPATA19', 'TTTY8', 'TTTY9B', 'NANOS2', 'AVPR1B', 'XAGE3', 'CNGB1', 'MOGAT3', 'OR2T12', 'NLRP8', 'KRTAP10-7', 'MAGEA1', 'SLC51B', 'CYP2C18', 'CNTNAP4', 'UGT1A4', 'TAS2R60', 'OPN1MW', 'RESP18', 'RPL3L', 'OACYLP', 'IHH', 'LRRTM1', 'SLC17A6', 'MAGEB6', 'SNAR-F', 'MAGEA5', 'CLEC4G', 'PRAMEF1', 'PRDM9', 'SPDYC', 'SPRR2C', 'GRK1', 'KRTAP2-1', 'DNTT', 'KRTAP19-6', 'FOXR1', 'OR6K6', 'APCS', 'SFTPC', 'BSX', 'NEU2', 'PAQR9', 'OR5M3', 'KCNIP4-IT1', 'SLC6A5', 'MUSK', 'PAPOLB', 'CNGA2', 'IL17F', 'SLC2A2', 'GOLGA6L1', 'C10ORF120', 'ZFY', 'F9', 'CALR3', 'ANP32D', 'KRTAP10-12', 'C11ORF94', 'CA6', 'APOA2', 'CCDC166', 'HAO1', 'LINC00304', 'DEFB123', 'PPIAL4E', 'KGFLP1', 'SFTPB', 'LINC00575', 'OR5M8', 'ALX4', 'DKFZP434K028', 'EPB42', 'HCRTR1', 'SPANXN3', 'IZUMO1R', 'KRT3', 'OR4D11', 'KRTAP3-2', 'OR52R1', 'SSX9', 'LELP1', 'CRYGB', 'FTMT', 'OTOL1', 'AWAT1', 'OR7E24', 'LINC00410', 'LINC01553', 'BTN1A1', 'KRT25', 'PLA2G12B', 'KRTAP10-11', 'SCN1A', 'OR1K1', 'C16ORF90', 'ANXA10', 'KRTAP13-1', 'GABRR3', 'PROKR2', 'CELA2B', 'MT4', 'OR12D2', 'C12ORF77', 'COX7B2', 'ALPPL2', 'ZNF679', 'FKBP6', 'FOXD4L3', 'IQCJ', 'OR1E2', 'LGALS14', 'OR4D5', 'TMEM14E', 'PRR32', 'OR2T10', 'HBE1', 'NXNL1', 'PRB4', 'LOC286238', 'LINC01591', 'AADACL3', 'PRAMEF16', 'AGXT2', 'AKR1C8P', 'TMPRSS11BNL', 'SCTR', 'BANF2', 'BTF3P11', 'RPS4Y2', 'CDX4', 'SLC36A3', 'CHAT', 'OR4K5', 'OR10W1', 'MTNR1B', 'YIPF7', 'SPACA3', 'LYZL1', 'TNP1', 'EPGN', 'NEUROD1', 'KRTAP9-2', 'SVOP', 'SLC5A8', 'ANGPTL3', 'SPRR2E', 'OR2G6', 'INSC', 'OR51B5', 'NCAN', 'OR7D4', 'OR2M3', 'PLCZ1', 'SLC10A1', 'LINC01142', 'DAW1', 'OR6A2', 'AADAC', 'NKX2-3', 'TRIM49', 'ACSM2B', 'GBA3', 'ITPK1-AS1', 'OCSTAMP', 'BCYRN1', 'CETN1', 'HIST1H3B', 'SNORA16B', 'GKN2', 'EDDM3B', 'PCSK2', 'HIST1H4B', 'FAM170A', 'HULC', 'LOC647859', 'MCF2', 'RSPH6A', 'C1ORF141', 'C1ORF94', 'OR5B17', 'OR4D10', 'CTRC', 'KRTAP1-3', 'SLC9C1', 'PTH2', 'BET1P1', 'SHH', 'GPHA2', 'OR10AG1', 'C12ORF50', 'ZSCAN10', 'LHX3', 'OR10G8', 'PRAC1', 'PSG4', 'DEFB119', 'HS3ST4', 'PRG1', 'IL3', 'GUCY2F', 'DMRT1', 'LINC00520', 'OR1M1', 'OR1N1', 'OR1S1', 'NLRP13', 'UGT2B28', 'FAM47C', 'MMP23A', 'KRT71', 'TDRG1', 'FAM138B', 'NXPE1', 'FAM150A', 'AMER3', 'PCDH8', 'GCGR', 'NPSR1-AS1', 'ARL13A', 'DRD3', 'HSD52', 'TARM1', 'TCEB3C', 'LINC00202-2', 'SH2D7', 'IGFBP1', 'OR5E1P', 'OR2B3', 'OR5H2', 'SNORA27', 'SLCO6A1', 'CALCB', 'TMEM8C', 'GABRA4', 'SNORD15B', 'LINC00479', 'LOC284798', 'CHRNB3', 'HGC6.3', 'CCKAR', 'XKR7', 'ISL1', 'MRGPRG-AS1', 'CGB8', 'SNORA36B', 'LINC00523', 'MYH7', 'CGB2', 'GUCA1C', 'NEUROG3', 'PRSS57', 'FAM71B', 'VWA5B1', 'PROKR1', 'SLCO1B7', 'VGLL2', 'UBE2DNL', 'NKX6-2', 'PRKY', 'CACNG7', 'GH1', 'CCER1', 'PPP1R2P9', 'TRPM3', 'C7ORF72', 'IL36A', 'BPIFB4', 'UGT2B10', 'USP50', 'MTVR2', 'MUC13', 'LINC00032', 'FGF23', 'OR4K1', 'KRTAP12-2', 'OR52N2', 'DEFB118', 'KRTAP1-5', 'DEFB115', 'AIRE', 'RNF151', 'EXD1', 'FGF16', 'APOA5', 'PASD1', 'SNORA77', 'OR2A14', 'POU4F3', 'SYT14P1', 'HTR1A', 'FMO9P', 'SNORD97', 'ZFAT-AS1', 'B4GALNT2', 'OLFM3', 'HMSD', 'OR2B11', 'FOXE3', 'OR10K1', 'LINC00923', 'OR1L4', 'DSCR10', 'KDM5D', 'ANKRD34C', 'CHRNA9', 'DPRX', 'POU4F2', 'KRTAP3-3', 'MYADML', 'SFTA3', 'OR52K2', 'HCRTR2', 'PTCHD3', 'LINC00710', 'OR1L1', 'MEP1A', 'FAM9B', 'SNORA2B', 'MAGEA9B', 'KRTAP12-1', 'LINC00964', 'OTC', 'GPR148', 'MYH16', 'PACRG-AS1', 'C12ORF42', 'ITLN2', 'OTOR', 'SPATA3', 'OR10AD1', 'HIST1H3F', 'LOC100129055', 'PLD5', 'LOC100132831', 'FAM83A-AS1', 'ARID3C', 'IGLL1', 'C11ORF87', 'MYL1', 'LINC00052', 'OVCH1', 'NPSR1', 'CLEC18C', 'MIR1-1HG', 'TMSB4Y', 'POM121L2', 'HRK', 'CDH10', 'VIL1', 'CLEC4M', 'SNORA64', 'SLC39A12', 'VCX3A', 'CLRN1-AS1', 'OR51F2', 'CMTM5', 'PSG3', 'HTR4', 'HPVC1', 'OR2M2', 'LOC100130264', 'C4ORF50', 'SOX3', 'HIST2H2AB', 'C7ORF57', 'ATOH7', 'AATK-AS1', 'CPA2', 'SPINK14', 'FERD3L', 'TSNAX-DISC1', 'H3F3AP5', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.2166727616339496e-15 NRMSE: 7.314284796587451e-16 MAPE: 2.8814963437586647e-12 Pearson Correlation: 0.30038120208663716 Spearman Correlation: 0.28527460735538 Coefficient of Determination: -2.7477608009990995 RMSE: 0.45483767157262456 NRMSE: 0.32393999741654644 MAPE: 2819.6276973571566 Predictor: ElasticNet Pearson Correlation: 0.7062932644132358 Spearman Correlation: 0.6774065904422909 Coefficient of Determination: 0.4240620690096156 RMSE: 0.18129803417470372 NRMSE: 0.10899113523626248 MAPE: 305.96894985685026 Pearson Correlation: 0.48728400427747376 Spearman Correlation: 0.4287386596429617 Coefficient of Determination: 0.2262741638298147 RMSE: 0.20666362594250737 NRMSE: 0.1471879279973416 MAPE: 974.9072938246239 Predictor: RandomForests Pearson Correlation: 0.5381991817609222 Spearman Correlation: 0.5212219383454604 Coefficient of Determination: 0.24359701987100035 RMSE: 0.20776953591265712 NRMSE: 0.12490503655881084 MAPE: 328.21121962325674 Pearson Correlation: 0.5160748446969927 Spearman Correlation: 0.4833388002866732 Coefficient of Determination: 0.24078315625110525 RMSE: 0.20471676623616833 NRMSE: 0.14580135479186965 MAPE: 1044.3484910403204 Protein: ERBB2 x_train_column_count: 674 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'OR6C74', 'GYS2', 'IQCF6', 'IL13', 'ANKRD18DP', 'C10ORF53', 'LINC00469', 'LINC00696', 'LINC00895', 'CYP11B2', 'ADAM18', 'TCP10L2', 'C17ORF78', 'SNORA5B', 'FMO6P', 'PLET1', 'SCARNA11', 'LY6G6D', 'CGB5', 'POTEH', 'CLCA4', 'PLG', 'SST', 'TPD52L3', 'ZNF479', 'OR8B3', 'TMPRSS11F', 'TAAR9', 'OR2A2', 'F13B', 'SNORD89', 'OR1S2', 'OR5H14', 'ZCCHC13', 'OLAH', 'OPRD1', 'OR4D6', 'NOX3', 'LEUTX', 'VWC2L', 'EPS8L3', 'RPL13AP17', 'RAX2', 'DPPA5', 'KRTAP4-5', 'OR5T2', 'PRDM14', 'LOC285627', 'TKTL2', 'C18ORF42', 'OR10V1', 'OR2G2', 'OR8A1', 'SNORA71A', 'ZPBP', 'GPR78', 'FCAMR', 'BEND2', 'ACTRT2', 'TSGA13', 'SLC1A6', 'TTTY14', 'CST11', 'SSX5', 'STATH', 'CT45A1', 'OR5H6', 'IL26', 'LIPN', 'SPANXA2', 'OR6M1', 'ASB17', 'LINC01205', 'OR9G4', 'ACTR3BP2', 'SNORA74A', 'BARHL2', 'OR8D4', 'RTP2', 'LMNTD1', 'KLK9', 'OR4C12', 'LCNL1', 'TMEM202', 'OR11H4', 'OR2L8', 'GAGE2B', 'LOC145845', 'HNRNPCL1', 'KRTAP21-2', 'SERPINB3', 'DEFB110', 'KRT85', 'PWAR4', 'MYBPC2', 'LOC646813', 'C2ORF83', 'GPR52', 'PROP1', 'SSX8', 'LPO', 'NCOR1P1', 'SPATA31C1', 'ANKUB1', 'LINC00488', 'GOT1L1', 'OR2M4', 'LOC100129935', 'USP26', 'OR4C16', 'LINC00934', 'ZIM3', 'BPIFA3', 'DYDC1', 'FAM27B', 'COL6A4P1', 'TEX13B', 'CABS1', 'UGT2A3', 'OR4D9', 'FAM138D', 'ZAR1', 'FOXN3-AS2', 'POTED', 'CPLX4', 'SYCN', 'OR2M7', 'GSTA5', 'HIST1H4F', 'OR2T35', 'DUXA', 'SLC32A1', 'OR4K17', 'SLC38A8', 'TBC1D3P2', 'LINC00114', 'HTR3E', 'C3ORF30', 'KRTAP19-2', 'ASB18', 'CLRN2', 'RGS8', 'TMEM72', 'RBPJL', 'TRHR', 'HBD', 'CTRB1', 'B3GNT6', 'GABRG3', 'DAOA', 'WFDC8', 'DEFB104A', 'FRMPD4', 'LINC01565', 'KRTAP6-1', 'KRTAP25-1', 'HSFY2', 'EPPIN', 'LINC00608', 'OR56A1', 'OR6Y1', 'OR7A17', 'OR8H2', 'IL31', 'FBXW12', 'ALLC', 'OR4K2', 'OR4X2', 'GRIN2B', 'PRAMEF20', 'OR8G2', 'MYF5', 'LINC01566', 'KIR3DL3', 'MMD2', 'ITIH1', 'MAGEB3', 'ABRA', 'TCERG1L', 'OR8J3', 'CYLC2', 'SLC25A31', 'FAM169B', 'LINC00113', 'LOC729609', 'BMP15', 'FAM74A3', 'CFHR4', 'DEFB126', 'DEFB129', 'DEFB134', 'OR6B3', 'OR2AT4', 'FAM170B', 'INS', 'RHAG', 'CT47A1', 'CSNK1A1P1', 'OTOP1', 'GAGE12F', 'SRY', 'NKAIN3', 'PSKH2', 'MYH1', 'CCK', 'TCP10', 'SNORA70B', 'OR52H1', 'CD200R1L', 'OR5P3', 'REG4', 'POU6F2', 'TRPV5', 'KRTAP10-3', 'GPRC6A', 'ODF3', 'SPINK1', 'SCARNA8', 'FTHL17', 'ZNF705A', 'HOXC12', 'OR6B2', 'AQP2', 'KRTAP11-1', 'OR10H2', 'OR51I2', 'SNORA47', 'ACOT12', 'LCN9', 'DISC2', 'GUCY2EP', 'FGF6', 'TFF2', 'CHIAP2', 'CXADRP2', 'SNORA38B', 'C20ORF166-AS1', 'SNORD94', 'TMEM88B', 'OR4S1', 'OR5M10', 'MGC27382', 'MBD3L5', 'CNTN5', 'PYDC2', 'SNORA59B', 'ENAM', 'FIGLA', 'CCDC37', 'PCGEM1', 'PSG11', 'OR5AN1', 'OR6F1', 'OR14I1', 'SNORD115-26', 'LOC392196', 'SNCB', 'PISRT1', 'BOLL', 'OR7C2', 'SPATA19', 'TTTY8', 'TTTY9B', 'NANOS2', 'AVPR1B', 'XAGE3', 'CNGB1', 'MOGAT3', 'OR2T12', 'NLRP8', 'KRTAP10-7', 'MAGEA1', 'SLC51B', 'CYP2C18', 'CNTNAP4', 'UGT1A4', 'TAS2R60', 'OPN1MW', 'RESP18', 'RPL3L', 'OACYLP', 'IHH', 'LRRTM1', 'SLC17A6', 'MAGEB6', 'SNAR-F', 'MAGEA5', 'CLEC4G', 'PRAMEF1', 'PRDM9', 'SPDYC', 'SPRR2C', 'GRK1', 'KRTAP2-1', 'DNTT', 'KRTAP19-6', 'FOXR1', 'OR6K6', 'APCS', 'SFTPC', 'BSX', 'NEU2', 'PAQR9', 'OR5M3', 'KCNIP4-IT1', 'SLC6A5', 'MUSK', 'PAPOLB', 'CNGA2', 'IL17F', 'SLC2A2', 'GOLGA6L1', 'C10ORF120', 'ZFY', 'F9', 'CALR3', 'ANP32D', 'KRTAP10-12', 'C11ORF94', 'CA6', 'APOA2', 'CCDC166', 'HAO1', 'LINC00304', 'DEFB123', 'PPIAL4E', 'KGFLP1', 'SFTPB', 'LINC00575', 'OR5M8', 'ALX4', 'DKFZP434K028', 'EPB42', 'HCRTR1', 'SPANXN3', 'IZUMO1R', 'KRT3', 'OR4D11', 'KRTAP3-2', 'OR52R1', 'SSX9', 'LELP1', 'CRYGB', 'FTMT', 'OTOL1', 'AWAT1', 'OR7E24', 'LINC00410', 'LINC01553', 'BTN1A1', 'KRT25', 'PLA2G12B', 'KRTAP10-11', 'SCN1A', 'OR1K1', 'C16ORF90', 'ANXA10', 'KRTAP13-1', 'GABRR3', 'PROKR2', 'CELA2B', 'MT4', 'OR12D2', 'C12ORF77', 'COX7B2', 'ALPPL2', 'ZNF679', 'FKBP6', 'FOXD4L3', 'IQCJ', 'OR1E2', 'LGALS14', 'OR4D5', 'TMEM14E', 'PRR32', 'OR2T10', 'HBE1', 'NXNL1', 'PRB4', 'LOC286238', 'LINC01591', 'AADACL3', 'PRAMEF16', 'AGXT2', 'AKR1C8P', 'TMPRSS11BNL', 'SCTR', 'BANF2', 'BTF3P11', 'RPS4Y2', 'CDX4', 'SLC36A3', 'CHAT', 'OR4K5', 'OR10W1', 'MTNR1B', 'YIPF7', 'SPACA3', 'LYZL1', 'TNP1', 'EPGN', 'NEUROD1', 'KRTAP9-2', 'SVOP', 'SLC5A8', 'ANGPTL3', 'SPRR2E', 'OR2G6', 'INSC', 'OR51B5', 'NCAN', 'OR7D4', 'OR2M3', 'PLCZ1', 'SLC10A1', 'LINC01142', 'DAW1', 'OR6A2', 'AADAC', 'NKX2-3', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 5.9555279976722114e-15 NRMSE: 1.0146222119822498e-15 MAPE: 6.519963596701759e-12 Pearson Correlation: 0.16510127225009663 Spearman Correlation: 0.22103697200273145 Coefficient of Determination: -11.107546951094438 RMSE: 3.156129052854414 NRMSE: 0.5852269706757676 MAPE: 1599.867545967303 Predictor: ElasticNet Pearson Correlation: 0.9390295060003547 Spearman Correlation: 0.8579423753827894 Coefficient of Determination: 0.8680960937960739 RMSE: 0.3701360897660599 NRMSE: 0.0630587746845767 MAPE: 350.55514838767306 Pearson Correlation: 0.7447891380265447 Spearman Correlation: 0.5187737781679836 Coefficient of Determination: 0.5463483763112611 RMSE: 0.6109250132461007 NRMSE: 0.11328110759245331 MAPE: 339.84529209373034 Predictor: RandomForests Pearson Correlation: 0.8417877633611578 Spearman Correlation: 0.6360468490309766 Coefficient of Determination: 0.7066469566267894 RMSE: 0.5519857970898392 NRMSE: 0.0940398652554371 MAPE: 464.1515036286078 Pearson Correlation: 0.8090662532459557 Spearman Correlation: 0.7211503453733257 Coefficient of Determination: 0.6435534541343422 RMSE: 0.5415316913865033 NRMSE: 0.10041381260643488 MAPE: 337.0737252374249 Protein: ERBB3 x_train_column_count: 254 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.7297834016647659 Spearman Correlation: 0.7048447369099117 Coefficient of Determination: 0.5254662780500221 RMSE: 0.31628376396817903 NRMSE: 0.08535591003791126 MAPE: 163.48378262501723 Pearson Correlation: 0.18549826524484875 Spearman Correlation: 0.3027830245624929 Coefficient of Determination: -1.0617780115084328 RMSE: 0.668433853518746 NRMSE: 0.26821466258937865 MAPE: 566.7058580365756 Predictor: ElasticNet Pearson Correlation: 0.6235924458751059 Spearman Correlation: 0.5907585105700801 Coefficient of Determination: 0.3616409961270751 RMSE: 0.3668392970519448 NRMSE: 0.09899939739140913 MAPE: 183.5389608485966 Pearson Correlation: 0.43519735262420917 Spearman Correlation: 0.47418846233142065 Coefficient of Determination: 0.17670972970247623 RMSE: 0.4223903393327814 NRMSE: 0.16948764900037774 MAPE: 205.22457752958698 Predictor: RandomForests Pearson Correlation: 0.5553464159951567 Spearman Correlation: 0.5141246331071472 Coefficient of Determination: 0.2899661490578346 RMSE: 0.3868858851229105 NRMSE: 0.10440939614216564 MAPE: 246.9031289525639 Pearson Correlation: 0.39414878571785456 Spearman Correlation: 0.45695809272959553 Coefficient of Determination: 0.14315329697975376 RMSE: 0.43091245819426666 NRMSE: 0.17290722032063216 MAPE: 274.8337608870041 Fold: 2 Protein: RB1 x_train_column_count: 382 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'OR8B3', 'LGALS14', 'OR52A4P', 'OR52B4', 'CT45A1', 'ARL5C', 'GYS2', 'SERPINI2', 'OR9A2', 'TMEM252', 'TMPRSS11F', 'TMPRSS11B', 'C10ORF53', 'TTTY2', 'MOGAT3', 'SNORA37', 'OR4F15', 'OR6S1', 'OR14C36', 'NXF2B', 'LINC00895', 'F13B', 'CGB5', 'LINC00469', 'HTR5A', 'HBG1', 'TCP10L2', 'IFNA16', 'OR10V1', 'FGA', 'PRSS1', 'ZNF479', 'MAGEB3', 'ZCCHC13', 'PPY', 'SNORA51', 'OR5H14', 'LINC00696', 'RAX2', 'WFDC5', 'OR4A16', 'GPR78', 'CLEC6A', 'ASB17', 'OR5T2', 'VWC2L', 'PSG7', 'ALPPL2', 'SST', 'PLG', 'ANKUB1', 'LINC00575', 'NOX3', 'SCARNA11', 'OR1S2', 'SNORA34', 'PLET1', 'LEUTX', 'LINC00523', 'RPL13AP17', 'OR1N1', 'LOC145845', 'ADAM18', 'TPD52L3', 'LINC01205', 'C18ORF42', 'POTED', 'ALOX12B', 'OR2G2', 'XAGE5', 'OR6M1', 'AMTN', 'OR2M2', 'HIST1H4F', 'C2ORF83', 'ARSF', 'SSX5', 'SFTA3', 'ARHGAP36', 'OR9G4', 'EPPIN', 'SLC1A6', 'ACTR3BP2', 'RESP18', 'OR11H4', 'OR4S1', 'ARR3', 'MBD3L5', 'OR2A2', 'LINC00488', 'CABS1', 'FMR1NB', 'TAAR9', 'PLSCR5', 'HNRNPCL1', 'SNORD89', 'TSGA13', 'ACTRT2', 'ZPBP', 'PROKR1', 'GH1', 'LINC01101', 'KRT13', 'BPIFA3', 'OPN1MW', 'OR4D9', 'SNORA70B', 'DEFB126', 'LINC00934', 'PROP1', 'SNORA1', 'FAM27B', 'OR8G5', 'CLCA4', 'ZIM3', 'PWAR4', 'CASC8', 'GABRG3', 'TRHR', 'CLRN2', 'ADGRG7', 'SPATA31C1', 'PRAMEF20', 'RGS8', 'RTP2', 'STATH', 'TCERG1L', 'ZAR1', 'COL6A4P1', 'MYBPHL', 'TMEM72', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.807673981682757 Spearman Correlation: 0.7857378545167456 Coefficient of Determination: 0.6523372606872784 RMSE: 0.13858714716642342 NRMSE: 0.05068283614921863 MAPE: 310.8461020487971 Pearson Correlation: 0.13493836129529221 Spearman Correlation: 0.18562579260559947 Coefficient of Determination: -7.503643779553368 RMSE: 0.7141648545897572 NRMSE: 0.4091650460002505 MAPE: 1462.7895483203295 Predictor: ElasticNet Pearson Correlation: 0.5114066002947645 Spearman Correlation: 0.4636283340002858 Coefficient of Determination: 0.21466464070138946 RMSE: 0.20829145651190475 NRMSE: 0.07617446478638998 MAPE: 232.503663930078 Pearson Correlation: 0.13194252245839244 Spearman Correlation: 0.16468149448834263 Coefficient of Determination: -0.009443354582810093 RMSE: 0.24605767781181517 NRMSE: 0.1409733346769346 MAPE: 170.98428949553806 Predictor: RandomForests Pearson Correlation: 0.5400262963130433 Spearman Correlation: 0.4343939741235512 Coefficient of Determination: 0.19635502459643817 RMSE: 0.21070556103048474 NRMSE: 0.07705732922413866 MAPE: 140.6567497433899 Pearson Correlation: 0.10433927477367883 Spearman Correlation: 0.15044280225062806 Coefficient of Determination: -0.021774683687508123 RMSE: 0.2475560322672569 NRMSE: 0.14183178390717244 MAPE: 213.4485604401169 Protein: CDH1 x_train_column_count: 837 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'OR8B3', 'LGALS14', 'OR52A4P', 'OR52B4', 'CT45A1', 'ARL5C', 'GYS2', 'SERPINI2', 'OR9A2', 'TMEM252', 'TMPRSS11F', 'TMPRSS11B', 'C10ORF53', 'TTTY2', 'MOGAT3', 'SNORA37', 'OR4F15', 'OR6S1', 'OR14C36', 'NXF2B', 'LINC00895', 'F13B', 'CGB5', 'LINC00469', 'HTR5A', 'HBG1', 'TCP10L2', 'IFNA16', 'OR10V1', 'FGA', 'PRSS1', 'ZNF479', 'MAGEB3', 'ZCCHC13', 'PPY', 'SNORA51', 'OR5H14', 'LINC00696', 'RAX2', 'WFDC5', 'OR4A16', 'GPR78', 'CLEC6A', 'ASB17', 'OR5T2', 'VWC2L', 'PSG7', 'ALPPL2', 'SST', 'PLG', 'ANKUB1', 'LINC00575', 'NOX3', 'SCARNA11', 'OR1S2', 'SNORA34', 'PLET1', 'LEUTX', 'LINC00523', 'RPL13AP17', 'OR1N1', 'LOC145845', 'ADAM18', 'TPD52L3', 'LINC01205', 'C18ORF42', 'POTED', 'ALOX12B', 'OR2G2', 'XAGE5', 'OR6M1', 'AMTN', 'OR2M2', 'HIST1H4F', 'C2ORF83', 'ARSF', 'SSX5', 'SFTA3', 'ARHGAP36', 'OR9G4', 'EPPIN', 'SLC1A6', 'ACTR3BP2', 'RESP18', 'OR11H4', 'OR4S1', 'ARR3', 'MBD3L5', 'OR2A2', 'LINC00488', 'CABS1', 'FMR1NB', 'TAAR9', 'PLSCR5', 'HNRNPCL1', 'SNORD89', 'TSGA13', 'ACTRT2', 'ZPBP', 'PROKR1', 'GH1', 'LINC01101', 'KRT13', 'BPIFA3', 'OPN1MW', 'OR4D9', 'SNORA70B', 'DEFB126', 'LINC00934', 'PROP1', 'SNORA1', 'FAM27B', 'OR8G5', 'CLCA4', 'ZIM3', 'PWAR4', 'CASC8', 'GABRG3', 'TRHR', 'CLRN2', 'ADGRG7', 'SPATA31C1', 'PRAMEF20', 'RGS8', 'RTP2', 'STATH', 'TCERG1L', 'ZAR1', 'COL6A4P1', 'MYBPHL', 'TMEM72', 'OR8G2', 'KRTAP25-1', 'OR2M4', 'CYP2W1', 'KRTAP19-8', 'SVOP', 'WFDC8', 'LINC00114', 'OR8H2', 'SLC38A8', 'OR2M7', 'SERPINB3', 'SLC32A1', 'LHX9', 'HYALP1', 'LINC00636', 'GYPB', 'NKAIN3', 'OR2T35', 'KRTAP6-1', 'HBD', 'KCNQ1DN', 'OR4C16', 'KRTAP19-2', 'DUXA', 'OR6Y1', 'IQCJ', 'LGI3', 'SPACA7', 'DAOA', 'OR7A17', 'FAM169B', 'OR2L8', 'HSFY2', 'SPANXA2', 'PPY2P', 'B3GNT6', 'DEFB104A', 'UGT2A3', 'OR6B3', 'TCP10', 'OR4K17', 'RHAG', 'SNORA38B', 'CTRB1', 'KRT3', 'INS', 'LINC00200', 'SPDYC', 'PRKAG3', 'OLIG1', 'KRTAP10-12', 'MYH1', 'LINC01566', 'FAM71C', 'LINC01565', 'PABPC1L2A', 'TRPV5', 'FDCSP', 'OR8J3', 'FTMT', 'INSM2', 'NEU2', 'TBC1D3P2', 'PPIAL4E', 'DYDC1', 'SFTPC', 'PRR27', 'MYF5', 'ACER1', 'DEFB129', 'HPD', 'IVL', 'C9ORF135', 'SNORD115-26', 'FBXW12', 'C3ORF30', 'IL13', 'MMD2', 'SLC51B', 'ITIH1', 'TEX13B', 'OR2AT4', 'HMX3', 'DNTT', 'CT47A1', 'OR6B2', 'KRTAP4-3', 'GSTA5', 'FAM27L', 'GPR148', 'OR1K1', 'LINC00602', 'AVPR1B', 'PRG1', 'C11ORF94', 'APOC3', 'LCN9', 'CYP2C18', 'SCARNA8', 'TAS2R60', 'KRTAP10-7', 'ZFAT-AS1', 'UCMA', 'SCN1A', 'LINC00113', 'FTHL17', 'HHLA1', 'LCE1D', 'PYDC2', 'OR11L1', 'GUCY2EP', 'CYLC2', 'KRTAP10-1', 'CSNK1A1P1', 'CCDC37', 'OR5M10', 'SPINK1', 'PSKH2', 'SULT1C3', 'CYP11B2', 'SNORD94', 'CYP7A1', 'CCK', 'SLC25A31', 'C20ORF173', 'OR5M8', 'LRRTM1', 'LOC729609', 'EPB42', 'TTTY8', 'TTTY9B', 'SLC17A6', 'EPGN', 'LYZL1', 'CGB8', 'SNORA77', 'CHIAP2', 'SPATA19', 'FAM138D', 'OLFM3', 'PCGEM1', 'UGT1A4', 'GBX2', 'SBSN', 'ACOT12', 'HBG2', 'CPLX3', 'REG4', 'PSG11', 'CNTNAP4', 'KRTAP21-1', 'SNORA47', 'KRTAP3-2', 'FFAR1', 'ABRA', 'TMEM202', 'HAO1', 'BOLL', 'ANGPTL3', 'ASAP1-IT1', 'SNCB', 'MMP20', 'LCN1', 'OR52K1', 'PRAMEF1', 'SPACA3', 'MUSK', 'PRDM9', 'SLITRK3', 'FOXN3-AS2', 'CCDC166', 'OR6K6', 'AADAC', 'KRTAP19-6', 'OR51G2', 'INSC', 'CCL24', 'UGT2B28', 'NKX2-1', 'OR2W1', 'DPRX', 'DPPA5', 'SNAR-F', 'MGC27382', 'CFHR4', 'NCAN', 'BRINP3', 'AWAT1', 'FOXD4L3', 'LOC285847', 'KRTAP2-1', 'CRLF2', 'DEFB123', 'BMP15', 'C1ORF94', 'IL17F', 'ENAM', 'TSKS', 'IQCF6', 'DPPA2', 'OR4C12', 'SPRR2E', 'DUSP21', 'LINC00923', 'APCS', 'KCNIP4-IT1', 'GRK1', 'OR51I2', 'PRSS54', 'MAGEA5', 'CRYGB', 'GAGE12F', 'ARL13A', 'OR56A1', 'MAP3K15', 'ASB11', 'DKFZP434K028', 'OR5H1', 'KRT25', 'NYX', 'CA6', 'NTS', 'C10ORF120', 'GCSAML-AS1', 'SLC10A1', 'SLC6A5', 'RPL3L', 'KRTAP10-6', 'IZUMO1R', 'MMP23A', 'MTNR1B', 'DAW1', 'BANF2', 'PROKR2', 'FAM74A3', 'NXNL1', 'TMPRSS12', 'OR6K2', 'PAPOLB', 'KRTAP10-3', 'OR12D2', 'AQP2', 'CD200R1L', 'FAM138B', 'OR6C2', 'LINC01312', 'LINC00410', 'IGLL3P', 'ADAM29', 'TFF2', 'NUTM1', 'SLURP1', 'KRTAP19-3', 'KRTAP5-4', 'AKR1C8P', 'TMEM88B', 'GOLGA6L1', 'OR4D5', 'KCNMB2', 'OTOL1', 'GRIN2B', 'YWHAEP7', 'ANP32D', 'OR1L1', 'TTTY15', 'SFTPB', 'NMUR2', 'IL3', 'OR51F2', 'YIPF7', 'USP9Y', 'CSN3', 'FAM71B', 'NEUROD1', 'OR2T10', 'OR2M3', 'OR10W1', 'ZNF705A', 'GPHA2', 'HBE1', 'SLC22A10', 'SNAR-G1', 'SNORA59B', 'PRB4', 'LRRC30', 'RBPJL', 'MAGEA9B', 'OR1B1', 'TARM1', 'AMER3', 'OR51B5', 'EDDM3B', 'TRIM48', 'GABRR3', 'IL36RN', 'URAD', 'RPS4Y2', 'KRTAP9-2', 'SDR16C6P', 'SLC9C1', 'SCTR', 'OCSTAMP', 'OR52R1', 'C16ORF90', 'PLA2G12B', 'NKX2-3', 'MUC2', 'SPANXN3', 'OR6A2', 'COX7B2', 'SYT14P1', 'OR7D4', 'SNORA76C', 'USH1C', 'TNP1', 'SPZ1', 'SNORD15B', 'AKR1D1', 'OR8I2', 'PSG4', 'BCYRN1', 'SHH', 'CCL15-CCL14', 'B4GALNT2', 'HULC', 'TBC1D21', 'OR13C9', 'FIGLA', 'ZNF679', 'OR5M3', 'PTH2', 'OR2L1P', 'TCEB3C', 'DEFB124', 'TRHDE', 'ANKRD34C', 'DEFB113', 'DMP1', 'GKN2', 'SNAR-I', 'CD300LD', 'DDI1', 'SNAR-E', 'GPR22', 'BPIFB4', 'CTRB2', 'CPA2', 'ADGRD2', 'KRTAP1-5', 'XKR7', 'OR10G8', 'BPIFB3', 'PPP1R2P9', 'SNORA36A', 'FKBP6', 'VIL1', 'SLC36A3', 'PCDH8', 'FAM41AY1', 'ACSM2B', 'AADACL3', 'SNORD97', 'NEUROD6', 'LINC00520', 'MAGEA1', 'CHRNB3', 'OR2AG1', 'OR4D2', 'C12ORF50', 'PRAC1', 'SH2D7', 'OACYLP', 'DISC2', 'NXPE1', 'USP50', 'BHLHE23', 'MYH7', 'CALCB', 'LOC284798', 'DEFB110', 'RAPGEF4-AS1', 'AIRE', 'KGFLP1', 'RFX6', 'CPNE4', 'CNGB1', 'CETN1', 'C2ORF27B', 'SSX9', 'SLC5A8', 'C11ORF40', 'LOC400736', 'SLCO1B7', 'TNFSF18', 'KRTAP1-1', 'KRT71', 'PRMT8', 'POU4F1', 'DMRT1', 'FAM183CP', 'KCNK4', 'ASB15', 'SCEL', 'GLYATL3', 'NEUROG3', 'CA5A', 'SNORA27', 'OR2L2', 'XIRP2', 'UGT2B10', 'FAM47C', 'NF1P2', 'DEFB118', 'TRIM75P', 'LINC00029', 'KCNJ16', 'CACNG7', 'HTR1A', 'DSCR10', 'MIR1-1HG', 'OR2A14', 'CD1B', 'OR8D4', 'GAGE2B', 'SPATA3', 'CIB4', 'HYMAI', 'ARL14', 'PRL', 'LOC100132831', 'FMO9P', 'HGC6.3', 'BTF3P11', 'OR52N1', 'SNORA16B', 'CDH10', 'HRK', 'KRTAP11-1', 'LINC00479', 'OR10H2', 'SNORA58', 'C12ORF42', 'LINC00202-2', 'C6ORF10', 'ODF3', 'GFI1B', 'OR1L4', 'OVCH1', 'HSD52', 'POU4F2', 'HIST1H3A', 'FAM19A1', 'HOXC12', 'OR52N2', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 5.884156808759403e-15 NRMSE: 9.439571362411811e-16 MAPE: 4.08830922031855e-12 Pearson Correlation: 0.24806820315232536 Spearman Correlation: 0.33236757389522975 Coefficient of Determination: -5.841410389826711 RMSE: 3.0095718159094544 NRMSE: 0.5344648936084984 MAPE: 1409.0868043911692 Predictor: ElasticNet Pearson Correlation: 0.8885735162086607 Spearman Correlation: 0.843941648737476 Coefficient of Determination: 0.7616234102061497 RMSE: 0.5471184817493239 NRMSE: 0.08777067165305588 MAPE: 223.12667979274985 Pearson Correlation: 0.626903034717484 Spearman Correlation: 0.6889718076285242 Coefficient of Determination: 0.36209480821012063 RMSE: 0.9189882489247212 NRMSE: 0.16320160698361236 MAPE: 333.95032817225956 Predictor: RandomForests Pearson Correlation: 0.7637056575108045 Spearman Correlation: 0.6771465558562935 Coefficient of Determination: 0.5786933493783033 RMSE: 0.7273588740064822 NRMSE: 0.11668546948046558 MAPE: 133.88546183899066 Pearson Correlation: 0.6428810596047162 Spearman Correlation: 0.6624215006528565 Coefficient of Determination: 0.3795698825463335 RMSE: 0.9063132420749421 NRMSE: 0.16095067342833283 MAPE: 205.31404357816854 Protein: CDH2 x_train_column_count: 478 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'OR8B3', 'LGALS14', 'OR52A4P', 'OR52B4', 'CT45A1', 'ARL5C', 'GYS2', 'SERPINI2', 'OR9A2', 'TMEM252', 'TMPRSS11F', 'TMPRSS11B', 'C10ORF53', 'TTTY2', 'MOGAT3', 'SNORA37', 'OR4F15', 'OR6S1', 'OR14C36', 'NXF2B', 'LINC00895', 'F13B', 'CGB5', 'LINC00469', 'HTR5A', 'HBG1', 'TCP10L2', 'IFNA16', 'OR10V1', 'FGA', 'PRSS1', 'ZNF479', 'MAGEB3', 'ZCCHC13', 'PPY', 'SNORA51', 'OR5H14', 'LINC00696', 'RAX2', 'WFDC5', 'OR4A16', 'GPR78', 'CLEC6A', 'ASB17', 'OR5T2', 'VWC2L', 'PSG7', 'ALPPL2', 'SST', 'PLG', 'ANKUB1', 'LINC00575', 'NOX3', 'SCARNA11', 'OR1S2', 'SNORA34', 'PLET1', 'LEUTX', 'LINC00523', 'RPL13AP17', 'OR1N1', 'LOC145845', 'ADAM18', 'TPD52L3', 'LINC01205', 'C18ORF42', 'POTED', 'ALOX12B', 'OR2G2', 'XAGE5', 'OR6M1', 'AMTN', 'OR2M2', 'HIST1H4F', 'C2ORF83', 'ARSF', 'SSX5', 'SFTA3', 'ARHGAP36', 'OR9G4', 'EPPIN', 'SLC1A6', 'ACTR3BP2', 'RESP18', 'OR11H4', 'OR4S1', 'ARR3', 'MBD3L5', 'OR2A2', 'LINC00488', 'CABS1', 'FMR1NB', 'TAAR9', 'PLSCR5', 'HNRNPCL1', 'SNORD89', 'TSGA13', 'ACTRT2', 'ZPBP', 'PROKR1', 'GH1', 'LINC01101', 'KRT13', 'BPIFA3', 'OPN1MW', 'OR4D9', 'SNORA70B', 'DEFB126', 'LINC00934', 'PROP1', 'SNORA1', 'FAM27B', 'OR8G5', 'CLCA4', 'ZIM3', 'PWAR4', 'CASC8', 'GABRG3', 'TRHR', 'CLRN2', 'ADGRG7', 'SPATA31C1', 'PRAMEF20', 'RGS8', 'RTP2', 'STATH', 'TCERG1L', 'ZAR1', 'COL6A4P1', 'MYBPHL', 'TMEM72', 'OR8G2', 'KRTAP25-1', 'OR2M4', 'CYP2W1', 'KRTAP19-8', 'SVOP', 'WFDC8', 'LINC00114', 'OR8H2', 'SLC38A8', 'OR2M7', 'SERPINB3', 'SLC32A1', 'LHX9', 'HYALP1', 'LINC00636', 'GYPB', 'NKAIN3', 'OR2T35', 'KRTAP6-1', 'HBD', 'KCNQ1DN', 'OR4C16', 'KRTAP19-2', 'DUXA', 'OR6Y1', 'IQCJ', 'LGI3', 'SPACA7', 'DAOA', 'OR7A17', 'FAM169B', 'OR2L8', 'HSFY2', 'SPANXA2', 'PPY2P', 'B3GNT6', 'DEFB104A', 'UGT2A3', 'OR6B3', 'TCP10', 'OR4K17', 'RHAG', 'SNORA38B', 'CTRB1', 'KRT3', 'INS', 'LINC00200', 'SPDYC', 'PRKAG3', 'OLIG1', 'KRTAP10-12', 'MYH1', 'LINC01566', 'FAM71C', 'LINC01565', 'PABPC1L2A', 'TRPV5', 'FDCSP', 'OR8J3', 'FTMT', 'INSM2', 'NEU2', 'TBC1D3P2', 'PPIAL4E', 'DYDC1', 'SFTPC', 'PRR27', 'MYF5', 'ACER1', 'DEFB129', 'HPD', 'IVL', 'C9ORF135', 'SNORD115-26', 'FBXW12', 'C3ORF30', 'IL13', 'MMD2', 'SLC51B', 'ITIH1', 'TEX13B', 'OR2AT4', 'HMX3', 'DNTT', 'CT47A1', 'OR6B2', 'KRTAP4-3', 'GSTA5', 'FAM27L', 'GPR148', 'OR1K1', 'LINC00602', 'AVPR1B', 'PRG1', 'C11ORF94', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.9381198835605329 Spearman Correlation: 0.9217827469440337 Coefficient of Determination: 0.8800689159316276 RMSE: 0.12747636619061192 NRMSE: 0.04619043633256465 MAPE: 168.12643650181843 Pearson Correlation: 0.058609593169232345 Spearman Correlation: 0.09547361233050435 Coefficient of Determination: -269.89648883295865 RMSE: 6.370930153430125 NRMSE: 3.35635383207517 MAPE: 2919.071535371027 Predictor: ElasticNet Pearson Correlation: 0.6751668870081332 Spearman Correlation: 0.6504503963452971 Coefficient of Determination: 0.4008056413316772 RMSE: 0.2849362165691053 NRMSE: 0.10324524116570233 MAPE: 672.1589041286686 Pearson Correlation: 0.12949707889555306 Spearman Correlation: 0.15650668227490003 Coefficient of Determination: 0.005016195512548616 RMSE: 0.38610832139869217 NRMSE: 0.20341082273910777 MAPE: 285.6839049641843 Predictor: RandomForests Pearson Correlation: 0.49373831389924583 Spearman Correlation: 0.45507535312344544 Coefficient of Determination: 0.13680646055777634 RMSE: 0.34199352692396545 NRMSE: 0.12391967784765762 MAPE: 246.22299879964737 Pearson Correlation: 0.10754183797217712 Spearman Correlation: 0.23443595068297435 Coefficient of Determination: 0.00895252778526634 RMSE: 0.3853438080368212 NRMSE: 0.2030080593607639 MAPE: 122.82885989917418 Protein: CDH3 x_train_column_count: 77 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.4797563450631481 Spearman Correlation: 0.47499763163416103 Coefficient of Determination: 0.2301661463537471 RMSE: 0.1822422305506826 NRMSE: 0.13715520124531136 MAPE: 264.14458008247544 Pearson Correlation: 0.09910607109405539 Spearman Correlation: 0.1529899521997854 Coefficient of Determination: -0.27491572161500444 RMSE: 0.22348422254281022 NRMSE: 0.18389222623451842 MAPE: 795.5962622244557 Predictor: ElasticNet Pearson Correlation: 0.40350423487938425 Spearman Correlation: 0.408571333919823 Coefficient of Determination: 0.149552630122755 RMSE: 0.19154650881001314 NRMSE: 0.14415758567204257 MAPE: 211.65188145472857 Pearson Correlation: 0.11735045577003467 Spearman Correlation: 0.24494195688225542 Coefficient of Determination: -0.16502224600964666 RMSE: 0.2136354103434572 NRMSE: 0.17578820895536676 MAPE: 563.2531813833859 Predictor: RandomForests Pearson Correlation: 0.4893009863244689 Spearman Correlation: 0.5181328829361499 Coefficient of Determination: 0.22710791556628007 RMSE: 0.18260385817678146 NRMSE: 0.1374273615985049 MAPE: 405.98371540012386 Pearson Correlation: 0.1176937205286002 Spearman Correlation: 0.2801948155894898 Coefficient of Determination: -0.21096409502880809 RMSE: 0.2178069649415461 NRMSE: 0.17922073968694655 MAPE: 1058.4786146959934 Protein: PTEN x_train_column_count: 910 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'OR8B3', 'LGALS14', 'OR52A4P', 'OR52B4', 'CT45A1', 'ARL5C', 'GYS2', 'SERPINI2', 'OR9A2', 'TMEM252', 'TMPRSS11F', 'TMPRSS11B', 'C10ORF53', 'TTTY2', 'MOGAT3', 'SNORA37', 'OR4F15', 'OR6S1', 'OR14C36', 'NXF2B', 'LINC00895', 'F13B', 'CGB5', 'LINC00469', 'HTR5A', 'HBG1', 'TCP10L2', 'IFNA16', 'OR10V1', 'FGA', 'PRSS1', 'ZNF479', 'MAGEB3', 'ZCCHC13', 'PPY', 'SNORA51', 'OR5H14', 'LINC00696', 'RAX2', 'WFDC5', 'OR4A16', 'GPR78', 'CLEC6A', 'ASB17', 'OR5T2', 'VWC2L', 'PSG7', 'ALPPL2', 'SST', 'PLG', 'ANKUB1', 'LINC00575', 'NOX3', 'SCARNA11', 'OR1S2', 'SNORA34', 'PLET1', 'LEUTX', 'LINC00523', 'RPL13AP17', 'OR1N1', 'LOC145845', 'ADAM18', 'TPD52L3', 'LINC01205', 'C18ORF42', 'POTED', 'ALOX12B', 'OR2G2', 'XAGE5', 'OR6M1', 'AMTN', 'OR2M2', 'HIST1H4F', 'C2ORF83', 'ARSF', 'SSX5', 'SFTA3', 'ARHGAP36', 'OR9G4', 'EPPIN', 'SLC1A6', 'ACTR3BP2', 'RESP18', 'OR11H4', 'OR4S1', 'ARR3', 'MBD3L5', 'OR2A2', 'LINC00488', 'CABS1', 'FMR1NB', 'TAAR9', 'PLSCR5', 'HNRNPCL1', 'SNORD89', 'TSGA13', 'ACTRT2', 'ZPBP', 'PROKR1', 'GH1', 'LINC01101', 'KRT13', 'BPIFA3', 'OPN1MW', 'OR4D9', 'SNORA70B', 'DEFB126', 'LINC00934', 'PROP1', 'SNORA1', 'FAM27B', 'OR8G5', 'CLCA4', 'ZIM3', 'PWAR4', 'CASC8', 'GABRG3', 'TRHR', 'CLRN2', 'ADGRG7', 'SPATA31C1', 'PRAMEF20', 'RGS8', 'RTP2', 'STATH', 'TCERG1L', 'ZAR1', 'COL6A4P1', 'MYBPHL', 'TMEM72', 'OR8G2', 'KRTAP25-1', 'OR2M4', 'CYP2W1', 'KRTAP19-8', 'SVOP', 'WFDC8', 'LINC00114', 'OR8H2', 'SLC38A8', 'OR2M7', 'SERPINB3', 'SLC32A1', 'LHX9', 'HYALP1', 'LINC00636', 'GYPB', 'NKAIN3', 'OR2T35', 'KRTAP6-1', 'HBD', 'KCNQ1DN', 'OR4C16', 'KRTAP19-2', 'DUXA', 'OR6Y1', 'IQCJ', 'LGI3', 'SPACA7', 'DAOA', 'OR7A17', 'FAM169B', 'OR2L8', 'HSFY2', 'SPANXA2', 'PPY2P', 'B3GNT6', 'DEFB104A', 'UGT2A3', 'OR6B3', 'TCP10', 'OR4K17', 'RHAG', 'SNORA38B', 'CTRB1', 'KRT3', 'INS', 'LINC00200', 'SPDYC', 'PRKAG3', 'OLIG1', 'KRTAP10-12', 'MYH1', 'LINC01566', 'FAM71C', 'LINC01565', 'PABPC1L2A', 'TRPV5', 'FDCSP', 'OR8J3', 'FTMT', 'INSM2', 'NEU2', 'TBC1D3P2', 'PPIAL4E', 'DYDC1', 'SFTPC', 'PRR27', 'MYF5', 'ACER1', 'DEFB129', 'HPD', 'IVL', 'C9ORF135', 'SNORD115-26', 'FBXW12', 'C3ORF30', 'IL13', 'MMD2', 'SLC51B', 'ITIH1', 'TEX13B', 'OR2AT4', 'HMX3', 'DNTT', 'CT47A1', 'OR6B2', 'KRTAP4-3', 'GSTA5', 'FAM27L', 'GPR148', 'OR1K1', 'LINC00602', 'AVPR1B', 'PRG1', 'C11ORF94', 'APOC3', 'LCN9', 'CYP2C18', 'SCARNA8', 'TAS2R60', 'KRTAP10-7', 'ZFAT-AS1', 'UCMA', 'SCN1A', 'LINC00113', 'FTHL17', 'HHLA1', 'LCE1D', 'PYDC2', 'OR11L1', 'GUCY2EP', 'CYLC2', 'KRTAP10-1', 'CSNK1A1P1', 'CCDC37', 'OR5M10', 'SPINK1', 'PSKH2', 'SULT1C3', 'CYP11B2', 'SNORD94', 'CYP7A1', 'CCK', 'SLC25A31', 'C20ORF173', 'OR5M8', 'LRRTM1', 'LOC729609', 'EPB42', 'TTTY8', 'TTTY9B', 'SLC17A6', 'EPGN', 'LYZL1', 'CGB8', 'SNORA77', 'CHIAP2', 'SPATA19', 'FAM138D', 'OLFM3', 'PCGEM1', 'UGT1A4', 'GBX2', 'SBSN', 'ACOT12', 'HBG2', 'CPLX3', 'REG4', 'PSG11', 'CNTNAP4', 'KRTAP21-1', 'SNORA47', 'KRTAP3-2', 'FFAR1', 'ABRA', 'TMEM202', 'HAO1', 'BOLL', 'ANGPTL3', 'ASAP1-IT1', 'SNCB', 'MMP20', 'LCN1', 'OR52K1', 'PRAMEF1', 'SPACA3', 'MUSK', 'PRDM9', 'SLITRK3', 'FOXN3-AS2', 'CCDC166', 'OR6K6', 'AADAC', 'KRTAP19-6', 'OR51G2', 'INSC', 'CCL24', 'UGT2B28', 'NKX2-1', 'OR2W1', 'DPRX', 'DPPA5', 'SNAR-F', 'MGC27382', 'CFHR4', 'NCAN', 'BRINP3', 'AWAT1', 'FOXD4L3', 'LOC285847', 'KRTAP2-1', 'CRLF2', 'DEFB123', 'BMP15', 'C1ORF94', 'IL17F', 'ENAM', 'TSKS', 'IQCF6', 'DPPA2', 'OR4C12', 'SPRR2E', 'DUSP21', 'LINC00923', 'APCS', 'KCNIP4-IT1', 'GRK1', 'OR51I2', 'PRSS54', 'MAGEA5', 'CRYGB', 'GAGE12F', 'ARL13A', 'OR56A1', 'MAP3K15', 'ASB11', 'DKFZP434K028', 'OR5H1', 'KRT25', 'NYX', 'CA6', 'NTS', 'C10ORF120', 'GCSAML-AS1', 'SLC10A1', 'SLC6A5', 'RPL3L', 'KRTAP10-6', 'IZUMO1R', 'MMP23A', 'MTNR1B', 'DAW1', 'BANF2', 'PROKR2', 'FAM74A3', 'NXNL1', 'TMPRSS12', 'OR6K2', 'PAPOLB', 'KRTAP10-3', 'OR12D2', 'AQP2', 'CD200R1L', 'FAM138B', 'OR6C2', 'LINC01312', 'LINC00410', 'IGLL3P', 'ADAM29', 'TFF2', 'NUTM1', 'SLURP1', 'KRTAP19-3', 'KRTAP5-4', 'AKR1C8P', 'TMEM88B', 'GOLGA6L1', 'OR4D5', 'KCNMB2', 'OTOL1', 'GRIN2B', 'YWHAEP7', 'ANP32D', 'OR1L1', 'TTTY15', 'SFTPB', 'NMUR2', 'IL3', 'OR51F2', 'YIPF7', 'USP9Y', 'CSN3', 'FAM71B', 'NEUROD1', 'OR2T10', 'OR2M3', 'OR10W1', 'ZNF705A', 'GPHA2', 'HBE1', 'SLC22A10', 'SNAR-G1', 'SNORA59B', 'PRB4', 'LRRC30', 'RBPJL', 'MAGEA9B', 'OR1B1', 'TARM1', 'AMER3', 'OR51B5', 'EDDM3B', 'TRIM48', 'GABRR3', 'IL36RN', 'URAD', 'RPS4Y2', 'KRTAP9-2', 'SDR16C6P', 'SLC9C1', 'SCTR', 'OCSTAMP', 'OR52R1', 'C16ORF90', 'PLA2G12B', 'NKX2-3', 'MUC2', 'SPANXN3', 'OR6A2', 'COX7B2', 'SYT14P1', 'OR7D4', 'SNORA76C', 'USH1C', 'TNP1', 'SPZ1', 'SNORD15B', 'AKR1D1', 'OR8I2', 'PSG4', 'BCYRN1', 'SHH', 'CCL15-CCL14', 'B4GALNT2', 'HULC', 'TBC1D21', 'OR13C9', 'FIGLA', 'ZNF679', 'OR5M3', 'PTH2', 'OR2L1P', 'TCEB3C', 'DEFB124', 'TRHDE', 'ANKRD34C', 'DEFB113', 'DMP1', 'GKN2', 'SNAR-I', 'CD300LD', 'DDI1', 'SNAR-E', 'GPR22', 'BPIFB4', 'CTRB2', 'CPA2', 'ADGRD2', 'KRTAP1-5', 'XKR7', 'OR10G8', 'BPIFB3', 'PPP1R2P9', 'SNORA36A', 'FKBP6', 'VIL1', 'SLC36A3', 'PCDH8', 'FAM41AY1', 'ACSM2B', 'AADACL3', 'SNORD97', 'NEUROD6', 'LINC00520', 'MAGEA1', 'CHRNB3', 'OR2AG1', 'OR4D2', 'C12ORF50', 'PRAC1', 'SH2D7', 'OACYLP', 'DISC2', 'NXPE1', 'USP50', 'BHLHE23', 'MYH7', 'CALCB', 'LOC284798', 'DEFB110', 'RAPGEF4-AS1', 'AIRE', 'KGFLP1', 'RFX6', 'CPNE4', 'CNGB1', 'CETN1', 'C2ORF27B', 'SSX9', 'SLC5A8', 'C11ORF40', 'LOC400736', 'SLCO1B7', 'TNFSF18', 'KRTAP1-1', 'KRT71', 'PRMT8', 'POU4F1', 'DMRT1', 'FAM183CP', 'KCNK4', 'ASB15', 'SCEL', 'GLYATL3', 'NEUROG3', 'CA5A', 'SNORA27', 'OR2L2', 'XIRP2', 'UGT2B10', 'FAM47C', 'NF1P2', 'DEFB118', 'TRIM75P', 'LINC00029', 'KCNJ16', 'CACNG7', 'HTR1A', 'DSCR10', 'MIR1-1HG', 'OR2A14', 'CD1B', 'OR8D4', 'GAGE2B', 'SPATA3', 'CIB4', 'HYMAI', 'ARL14', 'PRL', 'LOC100132831', 'FMO9P', 'HGC6.3', 'BTF3P11', 'OR52N1', 'SNORA16B', 'CDH10', 'HRK', 'KRTAP11-1', 'LINC00479', 'OR10H2', 'SNORA58', 'C12ORF42', 'LINC00202-2', 'C6ORF10', 'ODF3', 'GFI1B', 'OR1L4', 'OVCH1', 'HSD52', 'POU4F2', 'HIST1H3A', 'FAM19A1', 'HOXC12', 'OR52N2', 'NPB', 'ADRB3', 'HIST2H2AB', 'HIST1H3F', 'RAET1L', 'SNORA2B', 'HCRTR2', 'SPOCK3', 'SCARNA1', 'GPR52', 'SLC39A12', 'ANKRD20A20P', 'XAGE3', 'HTR2C', 'IFNL1', 'GSC2', 'DEFB109P1', 'CLRN1-AS1', 'SPINT3', 'HPVC1', 'HHATL', 'CYP2A7', 'SLC2A2', 'OR2A12', 'HIST1H2BM', 'RNF222', 'IGFBP1', 'NEUROG1', 'CA4', 'TPSD1', 'SERPINB11', 'NKX6-2', 'OR5H2', 'AATK-AS1', 'KRT12', 'KLRC4', 'LINC00314', 'FOXG1', 'GABBR2', 'SNORA72', 'MYH16', 'LOC647859', 'OR51T1', 'CRYGC', 'OR5M1', 'FOXE3', 'GBA3', 'LINC00710', 'CRISP2', 'EXD1', 'F2', 'TRPM3', 'CLCA3P', 'SLC13A1', 'LOC285627', 'CGB2', 'MROH5', 'LINC00452', 'LINC00964', 'PLD5', 'LINC00691', 'KRTAP12-1', 'OR51L1', 'LOC400940', 'OR4N4', 'MYL1', 'TMEM207', 'FAM170A', 'SCGB3A2', 'PTCHD3', 'NYAP2', 'OR51A2', 'C5ORF47', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 3.646077088676651e-15 NRMSE: 5.701003969473303e-16 MAPE: 4.5720783576429206e-12 Pearson Correlation: 0.21178928489495363 Spearman Correlation: 0.2681153058238221 Coefficient of Determination: -3.9782254943319932 RMSE: 1.141546020995729 NRMSE: 0.3828635702293162 MAPE: 5502.429602708332 Predictor: ElasticNet Pearson Correlation: 0.8425015180346682 Spearman Correlation: 0.811039323744303 Coefficient of Determination: 0.6683105063824748 RMSE: 0.3592329400141734 NRMSE: 0.05616964115615251 MAPE: 218.67030710898274 Pearson Correlation: 0.3784143003922319 Spearman Correlation: 0.36165739927811924 Coefficient of Determination: 0.08077154839053158 RMSE: 0.4905325956296925 NRMSE: 0.16451992072366933 MAPE: 264.01945029814766 Predictor: RandomForests Pearson Correlation: 0.5697228762426049 Spearman Correlation: 0.5572947559163044 Coefficient of Determination: 0.2887543214498336 RMSE: 0.5260416306268718 NRMSE: 0.0822518381091192 MAPE: 265.3386185000175 Pearson Correlation: 0.3166763017484638 Spearman Correlation: 0.33694561339059625 Coefficient of Determination: 0.0898428320205582 RMSE: 0.488106216872884 NRMSE: 0.16370613659541322 MAPE: 566.9808705001245 Protein: BRCA2 x_train_column_count: 382 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'OR8B3', 'LGALS14', 'OR52A4P', 'OR52B4', 'CT45A1', 'ARL5C', 'GYS2', 'SERPINI2', 'OR9A2', 'TMEM252', 'TMPRSS11F', 'TMPRSS11B', 'C10ORF53', 'TTTY2', 'MOGAT3', 'SNORA37', 'OR4F15', 'OR6S1', 'OR14C36', 'NXF2B', 'LINC00895', 'F13B', 'CGB5', 'LINC00469', 'HTR5A', 'HBG1', 'TCP10L2', 'IFNA16', 'OR10V1', 'FGA', 'PRSS1', 'ZNF479', 'MAGEB3', 'ZCCHC13', 'PPY', 'SNORA51', 'OR5H14', 'LINC00696', 'RAX2', 'WFDC5', 'OR4A16', 'GPR78', 'CLEC6A', 'ASB17', 'OR5T2', 'VWC2L', 'PSG7', 'ALPPL2', 'SST', 'PLG', 'ANKUB1', 'LINC00575', 'NOX3', 'SCARNA11', 'OR1S2', 'SNORA34', 'PLET1', 'LEUTX', 'LINC00523', 'RPL13AP17', 'OR1N1', 'LOC145845', 'ADAM18', 'TPD52L3', 'LINC01205', 'C18ORF42', 'POTED', 'ALOX12B', 'OR2G2', 'XAGE5', 'OR6M1', 'AMTN', 'OR2M2', 'HIST1H4F', 'C2ORF83', 'ARSF', 'SSX5', 'SFTA3', 'ARHGAP36', 'OR9G4', 'EPPIN', 'SLC1A6', 'ACTR3BP2', 'RESP18', 'OR11H4', 'OR4S1', 'ARR3', 'MBD3L5', 'OR2A2', 'LINC00488', 'CABS1', 'FMR1NB', 'TAAR9', 'PLSCR5', 'HNRNPCL1', 'SNORD89', 'TSGA13', 'ACTRT2', 'ZPBP', 'PROKR1', 'GH1', 'LINC01101', 'KRT13', 'BPIFA3', 'OPN1MW', 'OR4D9', 'SNORA70B', 'DEFB126', 'LINC00934', 'PROP1', 'SNORA1', 'FAM27B', 'OR8G5', 'CLCA4', 'ZIM3', 'PWAR4', 'CASC8', 'GABRG3', 'TRHR', 'CLRN2', 'ADGRG7', 'SPATA31C1', 'PRAMEF20', 'RGS8', 'RTP2', 'STATH', 'TCERG1L', 'ZAR1', 'COL6A4P1', 'MYBPHL', 'TMEM72', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.8588592942981297 Spearman Correlation: 0.8222007542039536 Coefficient of Determination: 0.7376392874022816 RMSE: 0.10004741909125028 NRMSE: 0.06445316095426014 MAPE: 153.1628851987684 Pearson Correlation: 0.1371000282625172 Spearman Correlation: 0.09270315091210614 Coefficient of Determination: -7.597553230692094 RMSE: 0.5664571092622045 NRMSE: 0.38343302394333323 MAPE: 694.73473795973 Predictor: ElasticNet Pearson Correlation: 0.5371203305221677 Spearman Correlation: 0.40365320783880615 Coefficient of Determination: 0.22548944246560643 RMSE: 0.1718977372000218 NRMSE: 0.11074101285232521 MAPE: 119.87804247341684 Pearson Correlation: 0.016299988198913568 Spearman Correlation: -0.05029753194810264 Coefficient of Determination: -0.03637543233990992 RMSE: 0.19667001445631418 NRMSE: 0.13312531015840345 MAPE: 122.45224306346792 Predictor: RandomForests Pearson Correlation: 0.5102188963706693 Spearman Correlation: 0.47714947659052553 Coefficient of Determination: 0.1267839530078847 RMSE: 0.1825228926089592 NRMSE: 0.11758601553162133 MAPE: 122.21749473144325 Pearson Correlation: -0.00821518455381758 Spearman Correlation: 0.03414938713896438 Coefficient of Determination: -0.02268165806654232 RMSE: 0.19536637958528755 NRMSE: 0.1322428838413134 MAPE: 107.91644340511475 Protein: CDKN2A x_train_column_count: 653 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'OR8B3', 'LGALS14', 'OR52A4P', 'OR52B4', 'CT45A1', 'ARL5C', 'GYS2', 'SERPINI2', 'OR9A2', 'TMEM252', 'TMPRSS11F', 'TMPRSS11B', 'C10ORF53', 'TTTY2', 'MOGAT3', 'SNORA37', 'OR4F15', 'OR6S1', 'OR14C36', 'NXF2B', 'LINC00895', 'F13B', 'CGB5', 'LINC00469', 'HTR5A', 'HBG1', 'TCP10L2', 'IFNA16', 'OR10V1', 'FGA', 'PRSS1', 'ZNF479', 'MAGEB3', 'ZCCHC13', 'PPY', 'SNORA51', 'OR5H14', 'LINC00696', 'RAX2', 'WFDC5', 'OR4A16', 'GPR78', 'CLEC6A', 'ASB17', 'OR5T2', 'VWC2L', 'PSG7', 'ALPPL2', 'SST', 'PLG', 'ANKUB1', 'LINC00575', 'NOX3', 'SCARNA11', 'OR1S2', 'SNORA34', 'PLET1', 'LEUTX', 'LINC00523', 'RPL13AP17', 'OR1N1', 'LOC145845', 'ADAM18', 'TPD52L3', 'LINC01205', 'C18ORF42', 'POTED', 'ALOX12B', 'OR2G2', 'XAGE5', 'OR6M1', 'AMTN', 'OR2M2', 'HIST1H4F', 'C2ORF83', 'ARSF', 'SSX5', 'SFTA3', 'ARHGAP36', 'OR9G4', 'EPPIN', 'SLC1A6', 'ACTR3BP2', 'RESP18', 'OR11H4', 'OR4S1', 'ARR3', 'MBD3L5', 'OR2A2', 'LINC00488', 'CABS1', 'FMR1NB', 'TAAR9', 'PLSCR5', 'HNRNPCL1', 'SNORD89', 'TSGA13', 'ACTRT2', 'ZPBP', 'PROKR1', 'GH1', 'LINC01101', 'KRT13', 'BPIFA3', 'OPN1MW', 'OR4D9', 'SNORA70B', 'DEFB126', 'LINC00934', 'PROP1', 'SNORA1', 'FAM27B', 'OR8G5', 'CLCA4', 'ZIM3', 'PWAR4', 'CASC8', 'GABRG3', 'TRHR', 'CLRN2', 'ADGRG7', 'SPATA31C1', 'PRAMEF20', 'RGS8', 'RTP2', 'STATH', 'TCERG1L', 'ZAR1', 'COL6A4P1', 'MYBPHL', 'TMEM72', 'OR8G2', 'KRTAP25-1', 'OR2M4', 'CYP2W1', 'KRTAP19-8', 'SVOP', 'WFDC8', 'LINC00114', 'OR8H2', 'SLC38A8', 'OR2M7', 'SERPINB3', 'SLC32A1', 'LHX9', 'HYALP1', 'LINC00636', 'GYPB', 'NKAIN3', 'OR2T35', 'KRTAP6-1', 'HBD', 'KCNQ1DN', 'OR4C16', 'KRTAP19-2', 'DUXA', 'OR6Y1', 'IQCJ', 'LGI3', 'SPACA7', 'DAOA', 'OR7A17', 'FAM169B', 'OR2L8', 'HSFY2', 'SPANXA2', 'PPY2P', 'B3GNT6', 'DEFB104A', 'UGT2A3', 'OR6B3', 'TCP10', 'OR4K17', 'RHAG', 'SNORA38B', 'CTRB1', 'KRT3', 'INS', 'LINC00200', 'SPDYC', 'PRKAG3', 'OLIG1', 'KRTAP10-12', 'MYH1', 'LINC01566', 'FAM71C', 'LINC01565', 'PABPC1L2A', 'TRPV5', 'FDCSP', 'OR8J3', 'FTMT', 'INSM2', 'NEU2', 'TBC1D3P2', 'PPIAL4E', 'DYDC1', 'SFTPC', 'PRR27', 'MYF5', 'ACER1', 'DEFB129', 'HPD', 'IVL', 'C9ORF135', 'SNORD115-26', 'FBXW12', 'C3ORF30', 'IL13', 'MMD2', 'SLC51B', 'ITIH1', 'TEX13B', 'OR2AT4', 'HMX3', 'DNTT', 'CT47A1', 'OR6B2', 'KRTAP4-3', 'GSTA5', 'FAM27L', 'GPR148', 'OR1K1', 'LINC00602', 'AVPR1B', 'PRG1', 'C11ORF94', 'APOC3', 'LCN9', 'CYP2C18', 'SCARNA8', 'TAS2R60', 'KRTAP10-7', 'ZFAT-AS1', 'UCMA', 'SCN1A', 'LINC00113', 'FTHL17', 'HHLA1', 'LCE1D', 'PYDC2', 'OR11L1', 'GUCY2EP', 'CYLC2', 'KRTAP10-1', 'CSNK1A1P1', 'CCDC37', 'OR5M10', 'SPINK1', 'PSKH2', 'SULT1C3', 'CYP11B2', 'SNORD94', 'CYP7A1', 'CCK', 'SLC25A31', 'C20ORF173', 'OR5M8', 'LRRTM1', 'LOC729609', 'EPB42', 'TTTY8', 'TTTY9B', 'SLC17A6', 'EPGN', 'LYZL1', 'CGB8', 'SNORA77', 'CHIAP2', 'SPATA19', 'FAM138D', 'OLFM3', 'PCGEM1', 'UGT1A4', 'GBX2', 'SBSN', 'ACOT12', 'HBG2', 'CPLX3', 'REG4', 'PSG11', 'CNTNAP4', 'KRTAP21-1', 'SNORA47', 'KRTAP3-2', 'FFAR1', 'ABRA', 'TMEM202', 'HAO1', 'BOLL', 'ANGPTL3', 'ASAP1-IT1', 'SNCB', 'MMP20', 'LCN1', 'OR52K1', 'PRAMEF1', 'SPACA3', 'MUSK', 'PRDM9', 'SLITRK3', 'FOXN3-AS2', 'CCDC166', 'OR6K6', 'AADAC', 'KRTAP19-6', 'OR51G2', 'INSC', 'CCL24', 'UGT2B28', 'NKX2-1', 'OR2W1', 'DPRX', 'DPPA5', 'SNAR-F', 'MGC27382', 'CFHR4', 'NCAN', 'BRINP3', 'AWAT1', 'FOXD4L3', 'LOC285847', 'KRTAP2-1', 'CRLF2', 'DEFB123', 'BMP15', 'C1ORF94', 'IL17F', 'ENAM', 'TSKS', 'IQCF6', 'DPPA2', 'OR4C12', 'SPRR2E', 'DUSP21', 'LINC00923', 'APCS', 'KCNIP4-IT1', 'GRK1', 'OR51I2', 'PRSS54', 'MAGEA5', 'CRYGB', 'GAGE12F', 'ARL13A', 'OR56A1', 'MAP3K15', 'ASB11', 'DKFZP434K028', 'OR5H1', 'KRT25', 'NYX', 'CA6', 'NTS', 'C10ORF120', 'GCSAML-AS1', 'SLC10A1', 'SLC6A5', 'RPL3L', 'KRTAP10-6', 'IZUMO1R', 'MMP23A', 'MTNR1B', 'DAW1', 'BANF2', 'PROKR2', 'FAM74A3', 'NXNL1', 'TMPRSS12', 'OR6K2', 'PAPOLB', 'KRTAP10-3', 'OR12D2', 'AQP2', 'CD200R1L', 'FAM138B', 'OR6C2', 'LINC01312', 'LINC00410', 'IGLL3P', 'ADAM29', 'TFF2', 'NUTM1', 'SLURP1', 'KRTAP19-3', 'KRTAP5-4', 'AKR1C8P', 'TMEM88B', 'GOLGA6L1', 'OR4D5', 'KCNMB2', 'OTOL1', 'GRIN2B', 'YWHAEP7', 'ANP32D', 'OR1L1', 'TTTY15', 'SFTPB', 'NMUR2', 'IL3', 'OR51F2', 'YIPF7', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 6.888026921447471e-15 NRMSE: 1.557144098891708e-15 MAPE: 7.007202133084303e-12 Pearson Correlation: 0.16077113131329843 Spearman Correlation: 0.05268754267876306 Coefficient of Determination: -20.806707597812533 RMSE: 3.144770815553205 NRMSE: 0.8495706763435285 MAPE: 929.3579609859545 Predictor: ElasticNet Pearson Correlation: 0.8393293289399653 Spearman Correlation: 0.8091357195042833 Coefficient of Determination: 0.6778800596340758 RMSE: 0.37648551114558454 NRMSE: 0.08511032240207629 MAPE: 198.05565458546826 Pearson Correlation: 0.4929283383248816 Spearman Correlation: 0.28921080870159016 Coefficient of Determination: 0.23738975903508963 RMSE: 0.5880919935647024 NRMSE: 0.15887507930751632 MAPE: 200.91111993839084 Predictor: RandomForests Pearson Correlation: 0.6424773561991695 Spearman Correlation: 0.58698203122567 Coefficient of Determination: 0.40193098553368234 RMSE: 0.5129973403409624 NRMSE: 0.11597091451135128 MAPE: 198.75628962584352 Pearson Correlation: 0.6951270676122842 Spearman Correlation: 0.5737966591043184 Coefficient of Determination: 0.44532805539166387 RMSE: 0.5015474771563914 NRMSE: 0.13549477986719025 MAPE: 229.10325857891553 Protein: TP53 x_train_column_count: 1030 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'OR8B3', 'LGALS14', 'OR52A4P', 'OR52B4', 'CT45A1', 'ARL5C', 'GYS2', 'SERPINI2', 'OR9A2', 'TMEM252', 'TMPRSS11F', 'TMPRSS11B', 'C10ORF53', 'TTTY2', 'MOGAT3', 'SNORA37', 'OR4F15', 'OR6S1', 'OR14C36', 'NXF2B', 'LINC00895', 'F13B', 'CGB5', 'LINC00469', 'HTR5A', 'HBG1', 'TCP10L2', 'IFNA16', 'OR10V1', 'FGA', 'PRSS1', 'ZNF479', 'MAGEB3', 'ZCCHC13', 'PPY', 'SNORA51', 'OR5H14', 'LINC00696', 'RAX2', 'WFDC5', 'OR4A16', 'GPR78', 'CLEC6A', 'ASB17', 'OR5T2', 'VWC2L', 'PSG7', 'ALPPL2', 'SST', 'PLG', 'ANKUB1', 'LINC00575', 'NOX3', 'SCARNA11', 'OR1S2', 'SNORA34', 'PLET1', 'LEUTX', 'LINC00523', 'RPL13AP17', 'OR1N1', 'LOC145845', 'ADAM18', 'TPD52L3', 'LINC01205', 'C18ORF42', 'POTED', 'ALOX12B', 'OR2G2', 'XAGE5', 'OR6M1', 'AMTN', 'OR2M2', 'HIST1H4F', 'C2ORF83', 'ARSF', 'SSX5', 'SFTA3', 'ARHGAP36', 'OR9G4', 'EPPIN', 'SLC1A6', 'ACTR3BP2', 'RESP18', 'OR11H4', 'OR4S1', 'ARR3', 'MBD3L5', 'OR2A2', 'LINC00488', 'CABS1', 'FMR1NB', 'TAAR9', 'PLSCR5', 'HNRNPCL1', 'SNORD89', 'TSGA13', 'ACTRT2', 'ZPBP', 'PROKR1', 'GH1', 'LINC01101', 'KRT13', 'BPIFA3', 'OPN1MW', 'OR4D9', 'SNORA70B', 'DEFB126', 'LINC00934', 'PROP1', 'SNORA1', 'FAM27B', 'OR8G5', 'CLCA4', 'ZIM3', 'PWAR4', 'CASC8', 'GABRG3', 'TRHR', 'CLRN2', 'ADGRG7', 'SPATA31C1', 'PRAMEF20', 'RGS8', 'RTP2', 'STATH', 'TCERG1L', 'ZAR1', 'COL6A4P1', 'MYBPHL', 'TMEM72', 'OR8G2', 'KRTAP25-1', 'OR2M4', 'CYP2W1', 'KRTAP19-8', 'SVOP', 'WFDC8', 'LINC00114', 'OR8H2', 'SLC38A8', 'OR2M7', 'SERPINB3', 'SLC32A1', 'LHX9', 'HYALP1', 'LINC00636', 'GYPB', 'NKAIN3', 'OR2T35', 'KRTAP6-1', 'HBD', 'KCNQ1DN', 'OR4C16', 'KRTAP19-2', 'DUXA', 'OR6Y1', 'IQCJ', 'LGI3', 'SPACA7', 'DAOA', 'OR7A17', 'FAM169B', 'OR2L8', 'HSFY2', 'SPANXA2', 'PPY2P', 'B3GNT6', 'DEFB104A', 'UGT2A3', 'OR6B3', 'TCP10', 'OR4K17', 'RHAG', 'SNORA38B', 'CTRB1', 'KRT3', 'INS', 'LINC00200', 'SPDYC', 'PRKAG3', 'OLIG1', 'KRTAP10-12', 'MYH1', 'LINC01566', 'FAM71C', 'LINC01565', 'PABPC1L2A', 'TRPV5', 'FDCSP', 'OR8J3', 'FTMT', 'INSM2', 'NEU2', 'TBC1D3P2', 'PPIAL4E', 'DYDC1', 'SFTPC', 'PRR27', 'MYF5', 'ACER1', 'DEFB129', 'HPD', 'IVL', 'C9ORF135', 'SNORD115-26', 'FBXW12', 'C3ORF30', 'IL13', 'MMD2', 'SLC51B', 'ITIH1', 'TEX13B', 'OR2AT4', 'HMX3', 'DNTT', 'CT47A1', 'OR6B2', 'KRTAP4-3', 'GSTA5', 'FAM27L', 'GPR148', 'OR1K1', 'LINC00602', 'AVPR1B', 'PRG1', 'C11ORF94', 'APOC3', 'LCN9', 'CYP2C18', 'SCARNA8', 'TAS2R60', 'KRTAP10-7', 'ZFAT-AS1', 'UCMA', 'SCN1A', 'LINC00113', 'FTHL17', 'HHLA1', 'LCE1D', 'PYDC2', 'OR11L1', 'GUCY2EP', 'CYLC2', 'KRTAP10-1', 'CSNK1A1P1', 'CCDC37', 'OR5M10', 'SPINK1', 'PSKH2', 'SULT1C3', 'CYP11B2', 'SNORD94', 'CYP7A1', 'CCK', 'SLC25A31', 'C20ORF173', 'OR5M8', 'LRRTM1', 'LOC729609', 'EPB42', 'TTTY8', 'TTTY9B', 'SLC17A6', 'EPGN', 'LYZL1', 'CGB8', 'SNORA77', 'CHIAP2', 'SPATA19', 'FAM138D', 'OLFM3', 'PCGEM1', 'UGT1A4', 'GBX2', 'SBSN', 'ACOT12', 'HBG2', 'CPLX3', 'REG4', 'PSG11', 'CNTNAP4', 'KRTAP21-1', 'SNORA47', 'KRTAP3-2', 'FFAR1', 'ABRA', 'TMEM202', 'HAO1', 'BOLL', 'ANGPTL3', 'ASAP1-IT1', 'SNCB', 'MMP20', 'LCN1', 'OR52K1', 'PRAMEF1', 'SPACA3', 'MUSK', 'PRDM9', 'SLITRK3', 'FOXN3-AS2', 'CCDC166', 'OR6K6', 'AADAC', 'KRTAP19-6', 'OR51G2', 'INSC', 'CCL24', 'UGT2B28', 'NKX2-1', 'OR2W1', 'DPRX', 'DPPA5', 'SNAR-F', 'MGC27382', 'CFHR4', 'NCAN', 'BRINP3', 'AWAT1', 'FOXD4L3', 'LOC285847', 'KRTAP2-1', 'CRLF2', 'DEFB123', 'BMP15', 'C1ORF94', 'IL17F', 'ENAM', 'TSKS', 'IQCF6', 'DPPA2', 'OR4C12', 'SPRR2E', 'DUSP21', 'LINC00923', 'APCS', 'KCNIP4-IT1', 'GRK1', 'OR51I2', 'PRSS54', 'MAGEA5', 'CRYGB', 'GAGE12F', 'ARL13A', 'OR56A1', 'MAP3K15', 'ASB11', 'DKFZP434K028', 'OR5H1', 'KRT25', 'NYX', 'CA6', 'NTS', 'C10ORF120', 'GCSAML-AS1', 'SLC10A1', 'SLC6A5', 'RPL3L', 'KRTAP10-6', 'IZUMO1R', 'MMP23A', 'MTNR1B', 'DAW1', 'BANF2', 'PROKR2', 'FAM74A3', 'NXNL1', 'TMPRSS12', 'OR6K2', 'PAPOLB', 'KRTAP10-3', 'OR12D2', 'AQP2', 'CD200R1L', 'FAM138B', 'OR6C2', 'LINC01312', 'LINC00410', 'IGLL3P', 'ADAM29', 'TFF2', 'NUTM1', 'SLURP1', 'KRTAP19-3', 'KRTAP5-4', 'AKR1C8P', 'TMEM88B', 'GOLGA6L1', 'OR4D5', 'KCNMB2', 'OTOL1', 'GRIN2B', 'YWHAEP7', 'ANP32D', 'OR1L1', 'TTTY15', 'SFTPB', 'NMUR2', 'IL3', 'OR51F2', 'YIPF7', 'USP9Y', 'CSN3', 'FAM71B', 'NEUROD1', 'OR2T10', 'OR2M3', 'OR10W1', 'ZNF705A', 'GPHA2', 'HBE1', 'SLC22A10', 'SNAR-G1', 'SNORA59B', 'PRB4', 'LRRC30', 'RBPJL', 'MAGEA9B', 'OR1B1', 'TARM1', 'AMER3', 'OR51B5', 'EDDM3B', 'TRIM48', 'GABRR3', 'IL36RN', 'URAD', 'RPS4Y2', 'KRTAP9-2', 'SDR16C6P', 'SLC9C1', 'SCTR', 'OCSTAMP', 'OR52R1', 'C16ORF90', 'PLA2G12B', 'NKX2-3', 'MUC2', 'SPANXN3', 'OR6A2', 'COX7B2', 'SYT14P1', 'OR7D4', 'SNORA76C', 'USH1C', 'TNP1', 'SPZ1', 'SNORD15B', 'AKR1D1', 'OR8I2', 'PSG4', 'BCYRN1', 'SHH', 'CCL15-CCL14', 'B4GALNT2', 'HULC', 'TBC1D21', 'OR13C9', 'FIGLA', 'ZNF679', 'OR5M3', 'PTH2', 'OR2L1P', 'TCEB3C', 'DEFB124', 'TRHDE', 'ANKRD34C', 'DEFB113', 'DMP1', 'GKN2', 'SNAR-I', 'CD300LD', 'DDI1', 'SNAR-E', 'GPR22', 'BPIFB4', 'CTRB2', 'CPA2', 'ADGRD2', 'KRTAP1-5', 'XKR7', 'OR10G8', 'BPIFB3', 'PPP1R2P9', 'SNORA36A', 'FKBP6', 'VIL1', 'SLC36A3', 'PCDH8', 'FAM41AY1', 'ACSM2B', 'AADACL3', 'SNORD97', 'NEUROD6', 'LINC00520', 'MAGEA1', 'CHRNB3', 'OR2AG1', 'OR4D2', 'C12ORF50', 'PRAC1', 'SH2D7', 'OACYLP', 'DISC2', 'NXPE1', 'USP50', 'BHLHE23', 'MYH7', 'CALCB', 'LOC284798', 'DEFB110', 'RAPGEF4-AS1', 'AIRE', 'KGFLP1', 'RFX6', 'CPNE4', 'CNGB1', 'CETN1', 'C2ORF27B', 'SSX9', 'SLC5A8', 'C11ORF40', 'LOC400736', 'SLCO1B7', 'TNFSF18', 'KRTAP1-1', 'KRT71', 'PRMT8', 'POU4F1', 'DMRT1', 'FAM183CP', 'KCNK4', 'ASB15', 'SCEL', 'GLYATL3', 'NEUROG3', 'CA5A', 'SNORA27', 'OR2L2', 'XIRP2', 'UGT2B10', 'FAM47C', 'NF1P2', 'DEFB118', 'TRIM75P', 'LINC00029', 'KCNJ16', 'CACNG7', 'HTR1A', 'DSCR10', 'MIR1-1HG', 'OR2A14', 'CD1B', 'OR8D4', 'GAGE2B', 'SPATA3', 'CIB4', 'HYMAI', 'ARL14', 'PRL', 'LOC100132831', 'FMO9P', 'HGC6.3', 'BTF3P11', 'OR52N1', 'SNORA16B', 'CDH10', 'HRK', 'KRTAP11-1', 'LINC00479', 'OR10H2', 'SNORA58', 'C12ORF42', 'LINC00202-2', 'C6ORF10', 'ODF3', 'GFI1B', 'OR1L4', 'OVCH1', 'HSD52', 'POU4F2', 'HIST1H3A', 'FAM19A1', 'HOXC12', 'OR52N2', 'NPB', 'ADRB3', 'HIST2H2AB', 'HIST1H3F', 'RAET1L', 'SNORA2B', 'HCRTR2', 'SPOCK3', 'SCARNA1', 'GPR52', 'SLC39A12', 'ANKRD20A20P', 'XAGE3', 'HTR2C', 'IFNL1', 'GSC2', 'DEFB109P1', 'CLRN1-AS1', 'SPINT3', 'HPVC1', 'HHATL', 'CYP2A7', 'SLC2A2', 'OR2A12', 'HIST1H2BM', 'RNF222', 'IGFBP1', 'NEUROG1', 'CA4', 'TPSD1', 'SERPINB11', 'NKX6-2', 'OR5H2', 'AATK-AS1', 'KRT12', 'KLRC4', 'LINC00314', 'FOXG1', 'GABBR2', 'SNORA72', 'MYH16', 'LOC647859', 'OR51T1', 'CRYGC', 'OR5M1', 'FOXE3', 'GBA3', 'LINC00710', 'CRISP2', 'EXD1', 'F2', 'TRPM3', 'CLCA3P', 'SLC13A1', 'LOC285627', 'CGB2', 'MROH5', 'LINC00452', 'LINC00964', 'PLD5', 'LINC00691', 'KRTAP12-1', 'OR51L1', 'LOC400940', 'OR4N4', 'MYL1', 'TMEM207', 'FAM170A', 'SCGB3A2', 'PTCHD3', 'NYAP2', 'OR51A2', 'C5ORF47', 'FAM92A1P2', 'IGLL1', 'FRMPD2', 'HBM', 'POU4F3', 'POU6F2', 'PRSS48', 'TSHB', 'LINC01105', 'OR10AD1', 'FOXI3', 'SNORA68', 'STON1-GTF2A1L', 'S100A12', 'B3GALT1', 'TKTL2', 'C12ORF56', 'C1ORF146', 'MEP1A', 'OR3A2', 'MT1B', 'CACNG3', 'LOC100130417', 'ALAS2', 'DPP10', 'MAGEA11', 'SLC22A12', 'INS-IGF2', 'PRAMEF14', 'ART1', 'OR13C2', 'SSX8', 'CLEC18C', 'ZIC5', 'OR5A1', 'GH2', 'GPRC6A', 'MYH4', 'OR5E1P', 'OR52K2', 'OR13H1', 'MAGEB4', 'PAQR9', 'HIST1H3B', 'LOC391343', 'C11ORF87', 'CCL7', 'CWH43', 'PDX1', 'VSTM5', 'NHLH2', 'SPANXN2', 'HMHB1', 'PCSK2', 'FGF16', 'FAM9B', 'SNORA64', 'PAEP', 'FAM71E2', 'FEZF1', 'PATE3', 'FRG2DP', 'DACH2', 'DAPL1', 'LOC100130264', 'LOC100129055', 'MYADML', 'FEZF2', 'MMP21', 'ABCA13', 'TBATA', 'SNORA16A', 'HIST1H4B', 'CYP1A2', 'BRDT', 'LINC00608', 'OTC', 'IFNE', 'CASR', 'MAGEA12', 'GABRA3', 'SLITRK1', 'GABRB1', 'OR52A1', 'KLK12', 'IFNL2', 'TAS2R42', 'SPRR1B', 'C4ORF51', 'GJA10', 'OR12D3', 'GJB7', 'GPR61', 'MYL2', 'TBX20', 'OR2T2', 'KAAG1', 'SPRR2G', 'VAX1', 'ISL1', 'C17ORF78', 'GCKR', 'RNF151', 'LINC00652', 'KRT18P55', 'PLCZ1', 'OR7A5', 'KRTAP10-4', 'OR9K2', 'ADCYAP1R1', 'S100A7', 'ZG16', 'KRTAP4-5', 'FOXR1', 'KRT73', 'CST13P', 'OPRM1', 'SPINK14', 'FSHR', 'OR5K1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.2113727840799722e-15 NRMSE: 5.92305553523496e-16 MAPE: 4.286600922469506e-12 Pearson Correlation: 0.1220297046308328 Spearman Correlation: 0.0929470295580919 Coefficient of Determination: -1.767776533121534 RMSE: 0.681076398022761 NRMSE: 0.22429652495398023 MAPE: 2695.5155340641886 Predictor: ElasticNet Pearson Correlation: 0.8654674762031456 Spearman Correlation: 0.782478455959565 Coefficient of Determination: 0.7073442064952036 RMSE: 0.24631876501639177 NRMSE: 0.06597529530370745 MAPE: 273.9432099369972 Pearson Correlation: 0.3662422251325018 Spearman Correlation: 0.3710174617110526 Coefficient of Determination: 0.11711748115707166 RMSE: 0.38466420784866256 NRMSE: 0.12668012772885312 MAPE: 1283.408940098084 Predictor: RandomForests Pearson Correlation: 0.656465670053954 Spearman Correlation: 0.5715890637512641 Coefficient of Determination: 0.38357927822314053 RMSE: 0.35748477502883214 NRMSE: 0.09575057587487135 MAPE: 320.46611313542314 Pearson Correlation: 0.5546068006651379 Spearman Correlation: 0.4503881395568437 Coefficient of Determination: 0.29498062776699374 RMSE: 0.34374061084078367 NRMSE: 0.11320290164359745 MAPE: 1520.1230943249782 Protein: CTNNB1 x_train_column_count: 1030 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'OR8B3', 'LGALS14', 'OR52A4P', 'OR52B4', 'CT45A1', 'ARL5C', 'GYS2', 'SERPINI2', 'OR9A2', 'TMEM252', 'TMPRSS11F', 'TMPRSS11B', 'C10ORF53', 'TTTY2', 'MOGAT3', 'SNORA37', 'OR4F15', 'OR6S1', 'OR14C36', 'NXF2B', 'LINC00895', 'F13B', 'CGB5', 'LINC00469', 'HTR5A', 'HBG1', 'TCP10L2', 'IFNA16', 'OR10V1', 'FGA', 'PRSS1', 'ZNF479', 'MAGEB3', 'ZCCHC13', 'PPY', 'SNORA51', 'OR5H14', 'LINC00696', 'RAX2', 'WFDC5', 'OR4A16', 'GPR78', 'CLEC6A', 'ASB17', 'OR5T2', 'VWC2L', 'PSG7', 'ALPPL2', 'SST', 'PLG', 'ANKUB1', 'LINC00575', 'NOX3', 'SCARNA11', 'OR1S2', 'SNORA34', 'PLET1', 'LEUTX', 'LINC00523', 'RPL13AP17', 'OR1N1', 'LOC145845', 'ADAM18', 'TPD52L3', 'LINC01205', 'C18ORF42', 'POTED', 'ALOX12B', 'OR2G2', 'XAGE5', 'OR6M1', 'AMTN', 'OR2M2', 'HIST1H4F', 'C2ORF83', 'ARSF', 'SSX5', 'SFTA3', 'ARHGAP36', 'OR9G4', 'EPPIN', 'SLC1A6', 'ACTR3BP2', 'RESP18', 'OR11H4', 'OR4S1', 'ARR3', 'MBD3L5', 'OR2A2', 'LINC00488', 'CABS1', 'FMR1NB', 'TAAR9', 'PLSCR5', 'HNRNPCL1', 'SNORD89', 'TSGA13', 'ACTRT2', 'ZPBP', 'PROKR1', 'GH1', 'LINC01101', 'KRT13', 'BPIFA3', 'OPN1MW', 'OR4D9', 'SNORA70B', 'DEFB126', 'LINC00934', 'PROP1', 'SNORA1', 'FAM27B', 'OR8G5', 'CLCA4', 'ZIM3', 'PWAR4', 'CASC8', 'GABRG3', 'TRHR', 'CLRN2', 'ADGRG7', 'SPATA31C1', 'PRAMEF20', 'RGS8', 'RTP2', 'STATH', 'TCERG1L', 'ZAR1', 'COL6A4P1', 'MYBPHL', 'TMEM72', 'OR8G2', 'KRTAP25-1', 'OR2M4', 'CYP2W1', 'KRTAP19-8', 'SVOP', 'WFDC8', 'LINC00114', 'OR8H2', 'SLC38A8', 'OR2M7', 'SERPINB3', 'SLC32A1', 'LHX9', 'HYALP1', 'LINC00636', 'GYPB', 'NKAIN3', 'OR2T35', 'KRTAP6-1', 'HBD', 'KCNQ1DN', 'OR4C16', 'KRTAP19-2', 'DUXA', 'OR6Y1', 'IQCJ', 'LGI3', 'SPACA7', 'DAOA', 'OR7A17', 'FAM169B', 'OR2L8', 'HSFY2', 'SPANXA2', 'PPY2P', 'B3GNT6', 'DEFB104A', 'UGT2A3', 'OR6B3', 'TCP10', 'OR4K17', 'RHAG', 'SNORA38B', 'CTRB1', 'KRT3', 'INS', 'LINC00200', 'SPDYC', 'PRKAG3', 'OLIG1', 'KRTAP10-12', 'MYH1', 'LINC01566', 'FAM71C', 'LINC01565', 'PABPC1L2A', 'TRPV5', 'FDCSP', 'OR8J3', 'FTMT', 'INSM2', 'NEU2', 'TBC1D3P2', 'PPIAL4E', 'DYDC1', 'SFTPC', 'PRR27', 'MYF5', 'ACER1', 'DEFB129', 'HPD', 'IVL', 'C9ORF135', 'SNORD115-26', 'FBXW12', 'C3ORF30', 'IL13', 'MMD2', 'SLC51B', 'ITIH1', 'TEX13B', 'OR2AT4', 'HMX3', 'DNTT', 'CT47A1', 'OR6B2', 'KRTAP4-3', 'GSTA5', 'FAM27L', 'GPR148', 'OR1K1', 'LINC00602', 'AVPR1B', 'PRG1', 'C11ORF94', 'APOC3', 'LCN9', 'CYP2C18', 'SCARNA8', 'TAS2R60', 'KRTAP10-7', 'ZFAT-AS1', 'UCMA', 'SCN1A', 'LINC00113', 'FTHL17', 'HHLA1', 'LCE1D', 'PYDC2', 'OR11L1', 'GUCY2EP', 'CYLC2', 'KRTAP10-1', 'CSNK1A1P1', 'CCDC37', 'OR5M10', 'SPINK1', 'PSKH2', 'SULT1C3', 'CYP11B2', 'SNORD94', 'CYP7A1', 'CCK', 'SLC25A31', 'C20ORF173', 'OR5M8', 'LRRTM1', 'LOC729609', 'EPB42', 'TTTY8', 'TTTY9B', 'SLC17A6', 'EPGN', 'LYZL1', 'CGB8', 'SNORA77', 'CHIAP2', 'SPATA19', 'FAM138D', 'OLFM3', 'PCGEM1', 'UGT1A4', 'GBX2', 'SBSN', 'ACOT12', 'HBG2', 'CPLX3', 'REG4', 'PSG11', 'CNTNAP4', 'KRTAP21-1', 'SNORA47', 'KRTAP3-2', 'FFAR1', 'ABRA', 'TMEM202', 'HAO1', 'BOLL', 'ANGPTL3', 'ASAP1-IT1', 'SNCB', 'MMP20', 'LCN1', 'OR52K1', 'PRAMEF1', 'SPACA3', 'MUSK', 'PRDM9', 'SLITRK3', 'FOXN3-AS2', 'CCDC166', 'OR6K6', 'AADAC', 'KRTAP19-6', 'OR51G2', 'INSC', 'CCL24', 'UGT2B28', 'NKX2-1', 'OR2W1', 'DPRX', 'DPPA5', 'SNAR-F', 'MGC27382', 'CFHR4', 'NCAN', 'BRINP3', 'AWAT1', 'FOXD4L3', 'LOC285847', 'KRTAP2-1', 'CRLF2', 'DEFB123', 'BMP15', 'C1ORF94', 'IL17F', 'ENAM', 'TSKS', 'IQCF6', 'DPPA2', 'OR4C12', 'SPRR2E', 'DUSP21', 'LINC00923', 'APCS', 'KCNIP4-IT1', 'GRK1', 'OR51I2', 'PRSS54', 'MAGEA5', 'CRYGB', 'GAGE12F', 'ARL13A', 'OR56A1', 'MAP3K15', 'ASB11', 'DKFZP434K028', 'OR5H1', 'KRT25', 'NYX', 'CA6', 'NTS', 'C10ORF120', 'GCSAML-AS1', 'SLC10A1', 'SLC6A5', 'RPL3L', 'KRTAP10-6', 'IZUMO1R', 'MMP23A', 'MTNR1B', 'DAW1', 'BANF2', 'PROKR2', 'FAM74A3', 'NXNL1', 'TMPRSS12', 'OR6K2', 'PAPOLB', 'KRTAP10-3', 'OR12D2', 'AQP2', 'CD200R1L', 'FAM138B', 'OR6C2', 'LINC01312', 'LINC00410', 'IGLL3P', 'ADAM29', 'TFF2', 'NUTM1', 'SLURP1', 'KRTAP19-3', 'KRTAP5-4', 'AKR1C8P', 'TMEM88B', 'GOLGA6L1', 'OR4D5', 'KCNMB2', 'OTOL1', 'GRIN2B', 'YWHAEP7', 'ANP32D', 'OR1L1', 'TTTY15', 'SFTPB', 'NMUR2', 'IL3', 'OR51F2', 'YIPF7', 'USP9Y', 'CSN3', 'FAM71B', 'NEUROD1', 'OR2T10', 'OR2M3', 'OR10W1', 'ZNF705A', 'GPHA2', 'HBE1', 'SLC22A10', 'SNAR-G1', 'SNORA59B', 'PRB4', 'LRRC30', 'RBPJL', 'MAGEA9B', 'OR1B1', 'TARM1', 'AMER3', 'OR51B5', 'EDDM3B', 'TRIM48', 'GABRR3', 'IL36RN', 'URAD', 'RPS4Y2', 'KRTAP9-2', 'SDR16C6P', 'SLC9C1', 'SCTR', 'OCSTAMP', 'OR52R1', 'C16ORF90', 'PLA2G12B', 'NKX2-3', 'MUC2', 'SPANXN3', 'OR6A2', 'COX7B2', 'SYT14P1', 'OR7D4', 'SNORA76C', 'USH1C', 'TNP1', 'SPZ1', 'SNORD15B', 'AKR1D1', 'OR8I2', 'PSG4', 'BCYRN1', 'SHH', 'CCL15-CCL14', 'B4GALNT2', 'HULC', 'TBC1D21', 'OR13C9', 'FIGLA', 'ZNF679', 'OR5M3', 'PTH2', 'OR2L1P', 'TCEB3C', 'DEFB124', 'TRHDE', 'ANKRD34C', 'DEFB113', 'DMP1', 'GKN2', 'SNAR-I', 'CD300LD', 'DDI1', 'SNAR-E', 'GPR22', 'BPIFB4', 'CTRB2', 'CPA2', 'ADGRD2', 'KRTAP1-5', 'XKR7', 'OR10G8', 'BPIFB3', 'PPP1R2P9', 'SNORA36A', 'FKBP6', 'VIL1', 'SLC36A3', 'PCDH8', 'FAM41AY1', 'ACSM2B', 'AADACL3', 'SNORD97', 'NEUROD6', 'LINC00520', 'MAGEA1', 'CHRNB3', 'OR2AG1', 'OR4D2', 'C12ORF50', 'PRAC1', 'SH2D7', 'OACYLP', 'DISC2', 'NXPE1', 'USP50', 'BHLHE23', 'MYH7', 'CALCB', 'LOC284798', 'DEFB110', 'RAPGEF4-AS1', 'AIRE', 'KGFLP1', 'RFX6', 'CPNE4', 'CNGB1', 'CETN1', 'C2ORF27B', 'SSX9', 'SLC5A8', 'C11ORF40', 'LOC400736', 'SLCO1B7', 'TNFSF18', 'KRTAP1-1', 'KRT71', 'PRMT8', 'POU4F1', 'DMRT1', 'FAM183CP', 'KCNK4', 'ASB15', 'SCEL', 'GLYATL3', 'NEUROG3', 'CA5A', 'SNORA27', 'OR2L2', 'XIRP2', 'UGT2B10', 'FAM47C', 'NF1P2', 'DEFB118', 'TRIM75P', 'LINC00029', 'KCNJ16', 'CACNG7', 'HTR1A', 'DSCR10', 'MIR1-1HG', 'OR2A14', 'CD1B', 'OR8D4', 'GAGE2B', 'SPATA3', 'CIB4', 'HYMAI', 'ARL14', 'PRL', 'LOC100132831', 'FMO9P', 'HGC6.3', 'BTF3P11', 'OR52N1', 'SNORA16B', 'CDH10', 'HRK', 'KRTAP11-1', 'LINC00479', 'OR10H2', 'SNORA58', 'C12ORF42', 'LINC00202-2', 'C6ORF10', 'ODF3', 'GFI1B', 'OR1L4', 'OVCH1', 'HSD52', 'POU4F2', 'HIST1H3A', 'FAM19A1', 'HOXC12', 'OR52N2', 'NPB', 'ADRB3', 'HIST2H2AB', 'HIST1H3F', 'RAET1L', 'SNORA2B', 'HCRTR2', 'SPOCK3', 'SCARNA1', 'GPR52', 'SLC39A12', 'ANKRD20A20P', 'XAGE3', 'HTR2C', 'IFNL1', 'GSC2', 'DEFB109P1', 'CLRN1-AS1', 'SPINT3', 'HPVC1', 'HHATL', 'CYP2A7', 'SLC2A2', 'OR2A12', 'HIST1H2BM', 'RNF222', 'IGFBP1', 'NEUROG1', 'CA4', 'TPSD1', 'SERPINB11', 'NKX6-2', 'OR5H2', 'AATK-AS1', 'KRT12', 'KLRC4', 'LINC00314', 'FOXG1', 'GABBR2', 'SNORA72', 'MYH16', 'LOC647859', 'OR51T1', 'CRYGC', 'OR5M1', 'FOXE3', 'GBA3', 'LINC00710', 'CRISP2', 'EXD1', 'F2', 'TRPM3', 'CLCA3P', 'SLC13A1', 'LOC285627', 'CGB2', 'MROH5', 'LINC00452', 'LINC00964', 'PLD5', 'LINC00691', 'KRTAP12-1', 'OR51L1', 'LOC400940', 'OR4N4', 'MYL1', 'TMEM207', 'FAM170A', 'SCGB3A2', 'PTCHD3', 'NYAP2', 'OR51A2', 'C5ORF47', 'FAM92A1P2', 'IGLL1', 'FRMPD2', 'HBM', 'POU4F3', 'POU6F2', 'PRSS48', 'TSHB', 'LINC01105', 'OR10AD1', 'FOXI3', 'SNORA68', 'STON1-GTF2A1L', 'S100A12', 'B3GALT1', 'TKTL2', 'C12ORF56', 'C1ORF146', 'MEP1A', 'OR3A2', 'MT1B', 'CACNG3', 'LOC100130417', 'ALAS2', 'DPP10', 'MAGEA11', 'SLC22A12', 'INS-IGF2', 'PRAMEF14', 'ART1', 'OR13C2', 'SSX8', 'CLEC18C', 'ZIC5', 'OR5A1', 'GH2', 'GPRC6A', 'MYH4', 'OR5E1P', 'OR52K2', 'OR13H1', 'MAGEB4', 'PAQR9', 'HIST1H3B', 'LOC391343', 'C11ORF87', 'CCL7', 'CWH43', 'PDX1', 'VSTM5', 'NHLH2', 'SPANXN2', 'HMHB1', 'PCSK2', 'FGF16', 'FAM9B', 'SNORA64', 'PAEP', 'FAM71E2', 'FEZF1', 'PATE3', 'FRG2DP', 'DACH2', 'DAPL1', 'LOC100130264', 'LOC100129055', 'MYADML', 'FEZF2', 'MMP21', 'ABCA13', 'TBATA', 'SNORA16A', 'HIST1H4B', 'CYP1A2', 'BRDT', 'LINC00608', 'OTC', 'IFNE', 'CASR', 'MAGEA12', 'GABRA3', 'SLITRK1', 'GABRB1', 'OR52A1', 'KLK12', 'IFNL2', 'TAS2R42', 'SPRR1B', 'C4ORF51', 'GJA10', 'OR12D3', 'GJB7', 'GPR61', 'MYL2', 'TBX20', 'OR2T2', 'KAAG1', 'SPRR2G', 'VAX1', 'ISL1', 'C17ORF78', 'GCKR', 'RNF151', 'LINC00652', 'KRT18P55', 'PLCZ1', 'OR7A5', 'KRTAP10-4', 'OR9K2', 'ADCYAP1R1', 'S100A7', 'ZG16', 'KRTAP4-5', 'FOXR1', 'KRT73', 'CST13P', 'OPRM1', 'SPINK14', 'FSHR', 'OR5K1', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 3.4235060496299002e-15 NRMSE: 6.733882867092645e-16 MAPE: 3.652142331381804e-12 Pearson Correlation: 0.11212831971326614 Spearman Correlation: 0.12759730757974833 Coefficient of Determination: -1.8212868282240136 RMSE: 1.2875234749611322 NRMSE: 0.3204309188325657 MAPE: 426.1211904680549 Predictor: ElasticNet Pearson Correlation: 0.8757022315895961 Spearman Correlation: 0.8774492027169907 Coefficient of Determination: 0.7243120044580299 RMSE: 0.3806598765251608 NRMSE: 0.07487409058323384 MAPE: 257.5251940364497 Pearson Correlation: 0.24875024508811946 Spearman Correlation: 0.331045751633987 Coefficient of Determination: -0.03503525817793851 RMSE: 0.7798464644738937 NRMSE: 0.19408338878422485 MAPE: 225.59969008713273 Predictor: RandomForests Pearson Correlation: 0.5972590525658618 Spearman Correlation: 0.5538335183887589 Coefficient of Determination: 0.20898274764799762 RMSE: 0.6447942446680092 NRMSE: 0.12682813624469103 MAPE: 510.22488960743874 Pearson Correlation: 0.37204848188453643 Spearman Correlation: 0.3828650863330407 Coefficient of Determination: -0.017462050768773052 RMSE: 0.773197863728417 NRMSE: 0.19242872594719324 MAPE: 242.36904765127494 Protein: CCNE1 x_train_column_count: 362 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'OR8B3', 'LGALS14', 'OR52A4P', 'OR52B4', 'CT45A1', 'ARL5C', 'GYS2', 'SERPINI2', 'OR9A2', 'TMEM252', 'TMPRSS11F', 'TMPRSS11B', 'C10ORF53', 'TTTY2', 'MOGAT3', 'SNORA37', 'OR4F15', 'OR6S1', 'OR14C36', 'NXF2B', 'LINC00895', 'F13B', 'CGB5', 'LINC00469', 'HTR5A', 'HBG1', 'TCP10L2', 'IFNA16', 'OR10V1', 'FGA', 'PRSS1', 'ZNF479', 'MAGEB3', 'ZCCHC13', 'PPY', 'SNORA51', 'OR5H14', 'LINC00696', 'RAX2', 'WFDC5', 'OR4A16', 'GPR78', 'CLEC6A', 'ASB17', 'OR5T2', 'VWC2L', 'PSG7', 'ALPPL2', 'SST', 'PLG', 'ANKUB1', 'LINC00575', 'NOX3', 'SCARNA11', 'OR1S2', 'SNORA34', 'PLET1', 'LEUTX', 'LINC00523', 'RPL13AP17', 'OR1N1', 'LOC145845', 'ADAM18', 'TPD52L3', 'LINC01205', 'C18ORF42', 'POTED', 'ALOX12B', 'OR2G2', 'XAGE5', 'OR6M1', 'AMTN', 'OR2M2', 'HIST1H4F', 'C2ORF83', 'ARSF', 'SSX5', 'SFTA3', 'ARHGAP36', 'OR9G4', 'EPPIN', 'SLC1A6', 'ACTR3BP2', 'RESP18', 'OR11H4', 'OR4S1', 'ARR3', 'MBD3L5', 'OR2A2', 'LINC00488', 'CABS1', 'FMR1NB', 'TAAR9', 'PLSCR5', 'HNRNPCL1', 'SNORD89', 'TSGA13', 'ACTRT2', 'ZPBP', 'PROKR1', 'GH1', 'LINC01101', 'KRT13', 'BPIFA3', 'OPN1MW', 'OR4D9', 'SNORA70B', 'DEFB126', 'LINC00934', 'PROP1', 'SNORA1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.9565153291590928 Spearman Correlation: 0.8636585960703417 Coefficient of Determination: 0.9149215749163275 RMSE: 0.14957365244940432 NRMSE: 0.03609664127456243 MAPE: 37.101482620188925 Pearson Correlation: 0.1415498723635159 Spearman Correlation: 0.2528289922934348 Coefficient of Determination: -3.9652821011069186 RMSE: 0.9320348099502108 NRMSE: 0.5065434105349544 MAPE: 107.67043684821311 Predictor: ElasticNet Pearson Correlation: 0.8632324781484835 Spearman Correlation: 0.7224831492953283 Coefficient of Determination: 0.7342653006670377 RMSE: 0.2643440331204042 NRMSE: 0.06379420158805035 MAPE: 72.33128502221837 Pearson Correlation: 0.7541887650733728 Spearman Correlation: 0.630670178519169 Coefficient of Determination: 0.48525224313562 RMSE: 0.30009406076694733 NRMSE: 0.1630954846314096 MAPE: 53.43874513244995 Predictor: RandomForests Pearson Correlation: 0.8583520131515926 Spearman Correlation: 0.7109802859432093 Coefficient of Determination: 0.7324880392857284 RMSE: 0.2652265402348114 NRMSE: 0.06400717721717582 MAPE: 68.55101369667162 Pearson Correlation: 0.8365777098834983 Spearman Correlation: 0.7372077905160039 Coefficient of Determination: 0.6969705038168368 RMSE: 0.23025158093275133 NRMSE: 0.12513740886241304 MAPE: 41.08133355137975 Protein: CCND1 x_train_column_count: 910 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'OR8B3', 'LGALS14', 'OR52A4P', 'OR52B4', 'CT45A1', 'ARL5C', 'GYS2', 'SERPINI2', 'OR9A2', 'TMEM252', 'TMPRSS11F', 'TMPRSS11B', 'C10ORF53', 'TTTY2', 'MOGAT3', 'SNORA37', 'OR4F15', 'OR6S1', 'OR14C36', 'NXF2B', 'LINC00895', 'F13B', 'CGB5', 'LINC00469', 'HTR5A', 'HBG1', 'TCP10L2', 'IFNA16', 'OR10V1', 'FGA', 'PRSS1', 'ZNF479', 'MAGEB3', 'ZCCHC13', 'PPY', 'SNORA51', 'OR5H14', 'LINC00696', 'RAX2', 'WFDC5', 'OR4A16', 'GPR78', 'CLEC6A', 'ASB17', 'OR5T2', 'VWC2L', 'PSG7', 'ALPPL2', 'SST', 'PLG', 'ANKUB1', 'LINC00575', 'NOX3', 'SCARNA11', 'OR1S2', 'SNORA34', 'PLET1', 'LEUTX', 'LINC00523', 'RPL13AP17', 'OR1N1', 'LOC145845', 'ADAM18', 'TPD52L3', 'LINC01205', 'C18ORF42', 'POTED', 'ALOX12B', 'OR2G2', 'XAGE5', 'OR6M1', 'AMTN', 'OR2M2', 'HIST1H4F', 'C2ORF83', 'ARSF', 'SSX5', 'SFTA3', 'ARHGAP36', 'OR9G4', 'EPPIN', 'SLC1A6', 'ACTR3BP2', 'RESP18', 'OR11H4', 'OR4S1', 'ARR3', 'MBD3L5', 'OR2A2', 'LINC00488', 'CABS1', 'FMR1NB', 'TAAR9', 'PLSCR5', 'HNRNPCL1', 'SNORD89', 'TSGA13', 'ACTRT2', 'ZPBP', 'PROKR1', 'GH1', 'LINC01101', 'KRT13', 'BPIFA3', 'OPN1MW', 'OR4D9', 'SNORA70B', 'DEFB126', 'LINC00934', 'PROP1', 'SNORA1', 'FAM27B', 'OR8G5', 'CLCA4', 'ZIM3', 'PWAR4', 'CASC8', 'GABRG3', 'TRHR', 'CLRN2', 'ADGRG7', 'SPATA31C1', 'PRAMEF20', 'RGS8', 'RTP2', 'STATH', 'TCERG1L', 'ZAR1', 'COL6A4P1', 'MYBPHL', 'TMEM72', 'OR8G2', 'KRTAP25-1', 'OR2M4', 'CYP2W1', 'KRTAP19-8', 'SVOP', 'WFDC8', 'LINC00114', 'OR8H2', 'SLC38A8', 'OR2M7', 'SERPINB3', 'SLC32A1', 'LHX9', 'HYALP1', 'LINC00636', 'GYPB', 'NKAIN3', 'OR2T35', 'KRTAP6-1', 'HBD', 'KCNQ1DN', 'OR4C16', 'KRTAP19-2', 'DUXA', 'OR6Y1', 'IQCJ', 'LGI3', 'SPACA7', 'DAOA', 'OR7A17', 'FAM169B', 'OR2L8', 'HSFY2', 'SPANXA2', 'PPY2P', 'B3GNT6', 'DEFB104A', 'UGT2A3', 'OR6B3', 'TCP10', 'OR4K17', 'RHAG', 'SNORA38B', 'CTRB1', 'KRT3', 'INS', 'LINC00200', 'SPDYC', 'PRKAG3', 'OLIG1', 'KRTAP10-12', 'MYH1', 'LINC01566', 'FAM71C', 'LINC01565', 'PABPC1L2A', 'TRPV5', 'FDCSP', 'OR8J3', 'FTMT', 'INSM2', 'NEU2', 'TBC1D3P2', 'PPIAL4E', 'DYDC1', 'SFTPC', 'PRR27', 'MYF5', 'ACER1', 'DEFB129', 'HPD', 'IVL', 'C9ORF135', 'SNORD115-26', 'FBXW12', 'C3ORF30', 'IL13', 'MMD2', 'SLC51B', 'ITIH1', 'TEX13B', 'OR2AT4', 'HMX3', 'DNTT', 'CT47A1', 'OR6B2', 'KRTAP4-3', 'GSTA5', 'FAM27L', 'GPR148', 'OR1K1', 'LINC00602', 'AVPR1B', 'PRG1', 'C11ORF94', 'APOC3', 'LCN9', 'CYP2C18', 'SCARNA8', 'TAS2R60', 'KRTAP10-7', 'ZFAT-AS1', 'UCMA', 'SCN1A', 'LINC00113', 'FTHL17', 'HHLA1', 'LCE1D', 'PYDC2', 'OR11L1', 'GUCY2EP', 'CYLC2', 'KRTAP10-1', 'CSNK1A1P1', 'CCDC37', 'OR5M10', 'SPINK1', 'PSKH2', 'SULT1C3', 'CYP11B2', 'SNORD94', 'CYP7A1', 'CCK', 'SLC25A31', 'C20ORF173', 'OR5M8', 'LRRTM1', 'LOC729609', 'EPB42', 'TTTY8', 'TTTY9B', 'SLC17A6', 'EPGN', 'LYZL1', 'CGB8', 'SNORA77', 'CHIAP2', 'SPATA19', 'FAM138D', 'OLFM3', 'PCGEM1', 'UGT1A4', 'GBX2', 'SBSN', 'ACOT12', 'HBG2', 'CPLX3', 'REG4', 'PSG11', 'CNTNAP4', 'KRTAP21-1', 'SNORA47', 'KRTAP3-2', 'FFAR1', 'ABRA', 'TMEM202', 'HAO1', 'BOLL', 'ANGPTL3', 'ASAP1-IT1', 'SNCB', 'MMP20', 'LCN1', 'OR52K1', 'PRAMEF1', 'SPACA3', 'MUSK', 'PRDM9', 'SLITRK3', 'FOXN3-AS2', 'CCDC166', 'OR6K6', 'AADAC', 'KRTAP19-6', 'OR51G2', 'INSC', 'CCL24', 'UGT2B28', 'NKX2-1', 'OR2W1', 'DPRX', 'DPPA5', 'SNAR-F', 'MGC27382', 'CFHR4', 'NCAN', 'BRINP3', 'AWAT1', 'FOXD4L3', 'LOC285847', 'KRTAP2-1', 'CRLF2', 'DEFB123', 'BMP15', 'C1ORF94', 'IL17F', 'ENAM', 'TSKS', 'IQCF6', 'DPPA2', 'OR4C12', 'SPRR2E', 'DUSP21', 'LINC00923', 'APCS', 'KCNIP4-IT1', 'GRK1', 'OR51I2', 'PRSS54', 'MAGEA5', 'CRYGB', 'GAGE12F', 'ARL13A', 'OR56A1', 'MAP3K15', 'ASB11', 'DKFZP434K028', 'OR5H1', 'KRT25', 'NYX', 'CA6', 'NTS', 'C10ORF120', 'GCSAML-AS1', 'SLC10A1', 'SLC6A5', 'RPL3L', 'KRTAP10-6', 'IZUMO1R', 'MMP23A', 'MTNR1B', 'DAW1', 'BANF2', 'PROKR2', 'FAM74A3', 'NXNL1', 'TMPRSS12', 'OR6K2', 'PAPOLB', 'KRTAP10-3', 'OR12D2', 'AQP2', 'CD200R1L', 'FAM138B', 'OR6C2', 'LINC01312', 'LINC00410', 'IGLL3P', 'ADAM29', 'TFF2', 'NUTM1', 'SLURP1', 'KRTAP19-3', 'KRTAP5-4', 'AKR1C8P', 'TMEM88B', 'GOLGA6L1', 'OR4D5', 'KCNMB2', 'OTOL1', 'GRIN2B', 'YWHAEP7', 'ANP32D', 'OR1L1', 'TTTY15', 'SFTPB', 'NMUR2', 'IL3', 'OR51F2', 'YIPF7', 'USP9Y', 'CSN3', 'FAM71B', 'NEUROD1', 'OR2T10', 'OR2M3', 'OR10W1', 'ZNF705A', 'GPHA2', 'HBE1', 'SLC22A10', 'SNAR-G1', 'SNORA59B', 'PRB4', 'LRRC30', 'RBPJL', 'MAGEA9B', 'OR1B1', 'TARM1', 'AMER3', 'OR51B5', 'EDDM3B', 'TRIM48', 'GABRR3', 'IL36RN', 'URAD', 'RPS4Y2', 'KRTAP9-2', 'SDR16C6P', 'SLC9C1', 'SCTR', 'OCSTAMP', 'OR52R1', 'C16ORF90', 'PLA2G12B', 'NKX2-3', 'MUC2', 'SPANXN3', 'OR6A2', 'COX7B2', 'SYT14P1', 'OR7D4', 'SNORA76C', 'USH1C', 'TNP1', 'SPZ1', 'SNORD15B', 'AKR1D1', 'OR8I2', 'PSG4', 'BCYRN1', 'SHH', 'CCL15-CCL14', 'B4GALNT2', 'HULC', 'TBC1D21', 'OR13C9', 'FIGLA', 'ZNF679', 'OR5M3', 'PTH2', 'OR2L1P', 'TCEB3C', 'DEFB124', 'TRHDE', 'ANKRD34C', 'DEFB113', 'DMP1', 'GKN2', 'SNAR-I', 'CD300LD', 'DDI1', 'SNAR-E', 'GPR22', 'BPIFB4', 'CTRB2', 'CPA2', 'ADGRD2', 'KRTAP1-5', 'XKR7', 'OR10G8', 'BPIFB3', 'PPP1R2P9', 'SNORA36A', 'FKBP6', 'VIL1', 'SLC36A3', 'PCDH8', 'FAM41AY1', 'ACSM2B', 'AADACL3', 'SNORD97', 'NEUROD6', 'LINC00520', 'MAGEA1', 'CHRNB3', 'OR2AG1', 'OR4D2', 'C12ORF50', 'PRAC1', 'SH2D7', 'OACYLP', 'DISC2', 'NXPE1', 'USP50', 'BHLHE23', 'MYH7', 'CALCB', 'LOC284798', 'DEFB110', 'RAPGEF4-AS1', 'AIRE', 'KGFLP1', 'RFX6', 'CPNE4', 'CNGB1', 'CETN1', 'C2ORF27B', 'SSX9', 'SLC5A8', 'C11ORF40', 'LOC400736', 'SLCO1B7', 'TNFSF18', 'KRTAP1-1', 'KRT71', 'PRMT8', 'POU4F1', 'DMRT1', 'FAM183CP', 'KCNK4', 'ASB15', 'SCEL', 'GLYATL3', 'NEUROG3', 'CA5A', 'SNORA27', 'OR2L2', 'XIRP2', 'UGT2B10', 'FAM47C', 'NF1P2', 'DEFB118', 'TRIM75P', 'LINC00029', 'KCNJ16', 'CACNG7', 'HTR1A', 'DSCR10', 'MIR1-1HG', 'OR2A14', 'CD1B', 'OR8D4', 'GAGE2B', 'SPATA3', 'CIB4', 'HYMAI', 'ARL14', 'PRL', 'LOC100132831', 'FMO9P', 'HGC6.3', 'BTF3P11', 'OR52N1', 'SNORA16B', 'CDH10', 'HRK', 'KRTAP11-1', 'LINC00479', 'OR10H2', 'SNORA58', 'C12ORF42', 'LINC00202-2', 'C6ORF10', 'ODF3', 'GFI1B', 'OR1L4', 'OVCH1', 'HSD52', 'POU4F2', 'HIST1H3A', 'FAM19A1', 'HOXC12', 'OR52N2', 'NPB', 'ADRB3', 'HIST2H2AB', 'HIST1H3F', 'RAET1L', 'SNORA2B', 'HCRTR2', 'SPOCK3', 'SCARNA1', 'GPR52', 'SLC39A12', 'ANKRD20A20P', 'XAGE3', 'HTR2C', 'IFNL1', 'GSC2', 'DEFB109P1', 'CLRN1-AS1', 'SPINT3', 'HPVC1', 'HHATL', 'CYP2A7', 'SLC2A2', 'OR2A12', 'HIST1H2BM', 'RNF222', 'IGFBP1', 'NEUROG1', 'CA4', 'TPSD1', 'SERPINB11', 'NKX6-2', 'OR5H2', 'AATK-AS1', 'KRT12', 'KLRC4', 'LINC00314', 'FOXG1', 'GABBR2', 'SNORA72', 'MYH16', 'LOC647859', 'OR51T1', 'CRYGC', 'OR5M1', 'FOXE3', 'GBA3', 'LINC00710', 'CRISP2', 'EXD1', 'F2', 'TRPM3', 'CLCA3P', 'SLC13A1', 'LOC285627', 'CGB2', 'MROH5', 'LINC00452', 'LINC00964', 'PLD5', 'LINC00691', 'KRTAP12-1', 'OR51L1', 'LOC400940', 'OR4N4', 'MYL1', 'TMEM207', 'FAM170A', 'SCGB3A2', 'PTCHD3', 'NYAP2', 'OR51A2', 'C5ORF47', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.9999999999999996 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.279098570171657e-15 NRMSE: 7.689570704762821e-16 MAPE: 4.884584751930696e-12 Pearson Correlation: -0.09834360980227544 Spearman Correlation: -0.06541800799921958 Coefficient of Determination: -3.53521522077064 RMSE: 0.5013719729584944 NRMSE: 0.3878906766095922 MAPE: 1533.9731159833557 Predictor: ElasticNet Pearson Correlation: 0.7398064880766703 Spearman Correlation: 0.7297317241154716 Coefficient of Determination: 0.4799167866178199 RMSE: 0.1721745259782713 NRMSE: 0.10350634594887119 MAPE: 395.9773654729305 Pearson Correlation: 0.2872588081160602 Spearman Correlation: 0.32676324261047707 Coefficient of Determination: 0.07710360166010766 RMSE: 0.2261713434507006 NRMSE: 0.17497937693468824 MAPE: 402.62393793714466 Predictor: RandomForests Pearson Correlation: 0.5667487975651887 Spearman Correlation: 0.56559946103911 Coefficient of Determination: 0.2906192059577013 RMSE: 0.20108153453466512 NRMSE: 0.12088440353889285 MAPE: 479.4248937355052 Pearson Correlation: 0.2562030423063652 Spearman Correlation: 0.40900937592628195 Coefficient of Determination: 0.048430663630586346 RMSE: 0.22965786417388495 NRMSE: 0.17767675324463464 MAPE: 315.04486439687014 Protein: ERBB2 x_train_column_count: 698 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'OR8B3', 'LGALS14', 'OR52A4P', 'OR52B4', 'CT45A1', 'ARL5C', 'GYS2', 'SERPINI2', 'OR9A2', 'TMEM252', 'TMPRSS11F', 'TMPRSS11B', 'C10ORF53', 'TTTY2', 'MOGAT3', 'SNORA37', 'OR4F15', 'OR6S1', 'OR14C36', 'NXF2B', 'LINC00895', 'F13B', 'CGB5', 'LINC00469', 'HTR5A', 'HBG1', 'TCP10L2', 'IFNA16', 'OR10V1', 'FGA', 'PRSS1', 'ZNF479', 'MAGEB3', 'ZCCHC13', 'PPY', 'SNORA51', 'OR5H14', 'LINC00696', 'RAX2', 'WFDC5', 'OR4A16', 'GPR78', 'CLEC6A', 'ASB17', 'OR5T2', 'VWC2L', 'PSG7', 'ALPPL2', 'SST', 'PLG', 'ANKUB1', 'LINC00575', 'NOX3', 'SCARNA11', 'OR1S2', 'SNORA34', 'PLET1', 'LEUTX', 'LINC00523', 'RPL13AP17', 'OR1N1', 'LOC145845', 'ADAM18', 'TPD52L3', 'LINC01205', 'C18ORF42', 'POTED', 'ALOX12B', 'OR2G2', 'XAGE5', 'OR6M1', 'AMTN', 'OR2M2', 'HIST1H4F', 'C2ORF83', 'ARSF', 'SSX5', 'SFTA3', 'ARHGAP36', 'OR9G4', 'EPPIN', 'SLC1A6', 'ACTR3BP2', 'RESP18', 'OR11H4', 'OR4S1', 'ARR3', 'MBD3L5', 'OR2A2', 'LINC00488', 'CABS1', 'FMR1NB', 'TAAR9', 'PLSCR5', 'HNRNPCL1', 'SNORD89', 'TSGA13', 'ACTRT2', 'ZPBP', 'PROKR1', 'GH1', 'LINC01101', 'KRT13', 'BPIFA3', 'OPN1MW', 'OR4D9', 'SNORA70B', 'DEFB126', 'LINC00934', 'PROP1', 'SNORA1', 'FAM27B', 'OR8G5', 'CLCA4', 'ZIM3', 'PWAR4', 'CASC8', 'GABRG3', 'TRHR', 'CLRN2', 'ADGRG7', 'SPATA31C1', 'PRAMEF20', 'RGS8', 'RTP2', 'STATH', 'TCERG1L', 'ZAR1', 'COL6A4P1', 'MYBPHL', 'TMEM72', 'OR8G2', 'KRTAP25-1', 'OR2M4', 'CYP2W1', 'KRTAP19-8', 'SVOP', 'WFDC8', 'LINC00114', 'OR8H2', 'SLC38A8', 'OR2M7', 'SERPINB3', 'SLC32A1', 'LHX9', 'HYALP1', 'LINC00636', 'GYPB', 'NKAIN3', 'OR2T35', 'KRTAP6-1', 'HBD', 'KCNQ1DN', 'OR4C16', 'KRTAP19-2', 'DUXA', 'OR6Y1', 'IQCJ', 'LGI3', 'SPACA7', 'DAOA', 'OR7A17', 'FAM169B', 'OR2L8', 'HSFY2', 'SPANXA2', 'PPY2P', 'B3GNT6', 'DEFB104A', 'UGT2A3', 'OR6B3', 'TCP10', 'OR4K17', 'RHAG', 'SNORA38B', 'CTRB1', 'KRT3', 'INS', 'LINC00200', 'SPDYC', 'PRKAG3', 'OLIG1', 'KRTAP10-12', 'MYH1', 'LINC01566', 'FAM71C', 'LINC01565', 'PABPC1L2A', 'TRPV5', 'FDCSP', 'OR8J3', 'FTMT', 'INSM2', 'NEU2', 'TBC1D3P2', 'PPIAL4E', 'DYDC1', 'SFTPC', 'PRR27', 'MYF5', 'ACER1', 'DEFB129', 'HPD', 'IVL', 'C9ORF135', 'SNORD115-26', 'FBXW12', 'C3ORF30', 'IL13', 'MMD2', 'SLC51B', 'ITIH1', 'TEX13B', 'OR2AT4', 'HMX3', 'DNTT', 'CT47A1', 'OR6B2', 'KRTAP4-3', 'GSTA5', 'FAM27L', 'GPR148', 'OR1K1', 'LINC00602', 'AVPR1B', 'PRG1', 'C11ORF94', 'APOC3', 'LCN9', 'CYP2C18', 'SCARNA8', 'TAS2R60', 'KRTAP10-7', 'ZFAT-AS1', 'UCMA', 'SCN1A', 'LINC00113', 'FTHL17', 'HHLA1', 'LCE1D', 'PYDC2', 'OR11L1', 'GUCY2EP', 'CYLC2', 'KRTAP10-1', 'CSNK1A1P1', 'CCDC37', 'OR5M10', 'SPINK1', 'PSKH2', 'SULT1C3', 'CYP11B2', 'SNORD94', 'CYP7A1', 'CCK', 'SLC25A31', 'C20ORF173', 'OR5M8', 'LRRTM1', 'LOC729609', 'EPB42', 'TTTY8', 'TTTY9B', 'SLC17A6', 'EPGN', 'LYZL1', 'CGB8', 'SNORA77', 'CHIAP2', 'SPATA19', 'FAM138D', 'OLFM3', 'PCGEM1', 'UGT1A4', 'GBX2', 'SBSN', 'ACOT12', 'HBG2', 'CPLX3', 'REG4', 'PSG11', 'CNTNAP4', 'KRTAP21-1', 'SNORA47', 'KRTAP3-2', 'FFAR1', 'ABRA', 'TMEM202', 'HAO1', 'BOLL', 'ANGPTL3', 'ASAP1-IT1', 'SNCB', 'MMP20', 'LCN1', 'OR52K1', 'PRAMEF1', 'SPACA3', 'MUSK', 'PRDM9', 'SLITRK3', 'FOXN3-AS2', 'CCDC166', 'OR6K6', 'AADAC', 'KRTAP19-6', 'OR51G2', 'INSC', 'CCL24', 'UGT2B28', 'NKX2-1', 'OR2W1', 'DPRX', 'DPPA5', 'SNAR-F', 'MGC27382', 'CFHR4', 'NCAN', 'BRINP3', 'AWAT1', 'FOXD4L3', 'LOC285847', 'KRTAP2-1', 'CRLF2', 'DEFB123', 'BMP15', 'C1ORF94', 'IL17F', 'ENAM', 'TSKS', 'IQCF6', 'DPPA2', 'OR4C12', 'SPRR2E', 'DUSP21', 'LINC00923', 'APCS', 'KCNIP4-IT1', 'GRK1', 'OR51I2', 'PRSS54', 'MAGEA5', 'CRYGB', 'GAGE12F', 'ARL13A', 'OR56A1', 'MAP3K15', 'ASB11', 'DKFZP434K028', 'OR5H1', 'KRT25', 'NYX', 'CA6', 'NTS', 'C10ORF120', 'GCSAML-AS1', 'SLC10A1', 'SLC6A5', 'RPL3L', 'KRTAP10-6', 'IZUMO1R', 'MMP23A', 'MTNR1B', 'DAW1', 'BANF2', 'PROKR2', 'FAM74A3', 'NXNL1', 'TMPRSS12', 'OR6K2', 'PAPOLB', 'KRTAP10-3', 'OR12D2', 'AQP2', 'CD200R1L', 'FAM138B', 'OR6C2', 'LINC01312', 'LINC00410', 'IGLL3P', 'ADAM29', 'TFF2', 'NUTM1', 'SLURP1', 'KRTAP19-3', 'KRTAP5-4', 'AKR1C8P', 'TMEM88B', 'GOLGA6L1', 'OR4D5', 'KCNMB2', 'OTOL1', 'GRIN2B', 'YWHAEP7', 'ANP32D', 'OR1L1', 'TTTY15', 'SFTPB', 'NMUR2', 'IL3', 'OR51F2', 'YIPF7', 'USP9Y', 'CSN3', 'FAM71B', 'NEUROD1', 'OR2T10', 'OR2M3', 'OR10W1', 'ZNF705A', 'GPHA2', 'HBE1', 'SLC22A10', 'SNAR-G1', 'SNORA59B', 'PRB4', 'LRRC30', 'RBPJL', 'MAGEA9B', 'OR1B1', 'TARM1', 'AMER3', 'OR51B5', 'EDDM3B', 'TRIM48', 'GABRR3', 'IL36RN', 'URAD', 'RPS4Y2', 'KRTAP9-2', 'SDR16C6P', 'SLC9C1', 'SCTR', 'OCSTAMP', 'OR52R1', 'C16ORF90', 'PLA2G12B', 'NKX2-3', 'MUC2', 'SPANXN3', 'OR6A2', 'COX7B2', 'SYT14P1', 'OR7D4', 'SNORA76C', 'USH1C', 'TNP1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 5.1078244807177966e-15 NRMSE: 9.166456365805495e-16 MAPE: 5.0359059746179296e-12 Pearson Correlation: 0.42552992828821423 Spearman Correlation: 0.3648570871134524 Coefficient of Determination: -1.3822563577257814 RMSE: 1.6317441289920376 NRMSE: 0.2779944680293776 MAPE: 1096.1748988300749 Predictor: ElasticNet Pearson Correlation: 0.9361567306206121 Spearman Correlation: 0.8728561033776904 Coefficient of Determination: 0.8612173614650129 RMSE: 0.366205567401555 NRMSE: 0.06571892529145147 MAPE: 181.67283125801006 Pearson Correlation: 0.7981124117502933 Spearman Correlation: 0.4739879036191592 Coefficient of Determination: 0.6077281339042808 RMSE: 0.6621423901708546 NRMSE: 0.11280685387172337 MAPE: 1177.9206240279389 Predictor: RandomForests Pearson Correlation: 0.845481607978856 Spearman Correlation: 0.6681326017901326 Coefficient of Determination: 0.7121704878277108 RMSE: 0.5273816727292395 NRMSE: 0.09464344574578532 MAPE: 278.8496141655355 Pearson Correlation: 0.8064757431741914 Spearman Correlation: 0.5014348149400902 Coefficient of Determination: 0.6286012150696798 RMSE: 0.6442850450262027 NRMSE: 0.10976456122565083 MAPE: 1421.060295700622 Protein: ERBB3 x_train_column_count: 251 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.7618542005433064 Spearman Correlation: 0.7189509073225805 Coefficient of Determination: 0.5804218228854803 RMSE: 0.28833429093828006 NRMSE: 0.07781314946235701 MAPE: 149.115406297276 Pearson Correlation: 0.21608852746944782 Spearman Correlation: 0.24824895132182231 Coefficient of Determination: -0.5436648855907551 RMSE: 0.6433065865245 NRMSE: 0.23741842364509022 MAPE: 560.2159906171119 Predictor: ElasticNet Pearson Correlation: 0.6250628125984088 Spearman Correlation: 0.6076295567536344 Coefficient of Determination: 0.36230471556328625 RMSE: 0.3554646779669734 NRMSE: 0.09592971417039496 MAPE: 174.7604168971406 Pearson Correlation: 0.34029295217991673 Spearman Correlation: 0.3829772705101942 Coefficient of Determination: 0.11290886845319481 RMSE: 0.4876695106638645 NRMSE: 0.17997907826049864 MAPE: 292.12330906441963 Predictor: RandomForests Pearson Correlation: 0.5648631216611818 Spearman Correlation: 0.5265345702229367 Coefficient of Determination: 0.29935291915419127 RMSE: 0.37259713199662814 NRMSE: 0.10055327178377592 MAPE: 208.00245204501488 Pearson Correlation: 0.4279264229017254 Spearman Correlation: 0.4103628526744945 Coefficient of Determination: 0.17480424909278558 RMSE: 0.47034873127878485 NRMSE: 0.17358667963743032 MAPE: 364.38316725286654 Fold: 3 Protein: RB1 x_train_column_count: 380 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'LINC00200', 'OR52B4', 'OR4F15', 'OR8J3', 'HTR5A', 'DAZL', 'RAB9BP1', 'SNORA32', 'C10ORF53', 'KRTAP19-8', 'IFNA16', 'OR2L2', 'TGIF2LX', 'F13B', 'FAM71A', 'OR11L1', 'OR9A2', 'OR8B3', 'TXLNGY', 'ZCCHC13', 'HBG1', 'OR2M3', 'GUCA2B', 'CLEC6A', 'NXF2B', 'OR10V1', 'OR10A5', 'SNORA51', 'OTX2', 'GRIN2B', 'TMPRSS11F', 'WFDC5', 'IL31', 'OR8S1', 'FGF23', 'OR5H14', 'HMHB1', 'PSG7', 'C18ORF42', 'LINC00895', 'MS4A6E', 'PPY', 'GOLGA6D', 'SCGB1C1', 'NOX3', 'KRTAP10-12', 'OR1N1', 'ASB17', 'ADAM18', 'ITLN2', 'RPL13AP17', 'OR1S2', 'KRTAP10-11', 'VWC2L', 'OR2G2', 'OR8G5', 'TAAR9', 'BRDTP1', 'PLG', 'SSX5', 'LEUTX', 'OR4D9', 'PWAR4', 'CRYAA', 'MAGEA10', 'TTTY14', 'TPD52L3', 'HIST1H4F', 'LINC01205', 'GDNF', 'SNORA34', 'CAPZA3', 'POTED', 'GPR52', 'MMP23A', 'LINC00636', 'ARSF', 'TCP10L2', 'SNORD89', 'XAGE5', 'C2ORF83', 'KRTAP12-2', 'COL6A4P1', 'TSGA13', 'LOC391343', 'ALOX12B', 'BTNL3', 'LOC391003', 'CYP11B2', 'CFHR4', 'SNORA70B', 'SFTA3', 'FAM27B', 'FMR1NB', 'HBD', 'RSPH6A', 'OR5T2', 'ANKUB1', 'OR4S1', 'BPIFA3', 'TRIM51', 'CYP2W1', 'OR9G4', 'CASC8', 'OPN1MW', 'SLC38A8', 'SSX8', 'ACTR3BP2', 'PROKR1', 'FOXN3-AS2', 'ARR3', 'OR56A1', 'ACTRT2', 'INSM2', 'P2RX3', 'ARHGAP36', 'HNRNPCL1', 'TBC1D28', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.8291596561259732 Spearman Correlation: 0.7815028318652334 Coefficient of Determination: 0.6875057353469424 RMSE: 0.13448771456224506 NRMSE: 0.0491836287895864 MAPE: 641.9371531591997 Pearson Correlation: 0.03050837523389166 Spearman Correlation: 0.04540954375989726 Coefficient of Determination: -163237.3349840763 RMSE: 89.5588159823237 NRMSE: 62.84211795495438 MAPE: 10682.427638570534 Predictor: ElasticNet Pearson Correlation: 0.5618378477167113 Spearman Correlation: 0.42220570885752146 Coefficient of Determination: 0.26921697772795317 RMSE: 0.20566283233638613 NRMSE: 0.07521314816280944 MAPE: 271.4908796046589 Pearson Correlation: 0.1876517687674993 Spearman Correlation: 0.2570331300889039 Coefficient of Determination: -0.004108403379673664 RMSE: 0.22211994946819422 NRMSE: 0.1558583363516526 MAPE: 237.96923558517875 Predictor: RandomForests Pearson Correlation: 0.5829353679289165 Spearman Correlation: 0.40652467854058655 Coefficient of Determination: 0.1821780248032916 RMSE: 0.2175659743151438 NRMSE: 0.07956625742947038 MAPE: 192.41206534222724 Pearson Correlation: 0.17490931986307762 Spearman Correlation: 0.3066723584894404 Coefficient of Determination: -0.00859835044422308 RMSE: 0.22261600866565057 NRMSE: 0.15620641387207612 MAPE: 199.37188313924028 Protein: CDH1 x_train_column_count: 877 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'LINC00200', 'OR52B4', 'OR4F15', 'OR8J3', 'HTR5A', 'DAZL', 'RAB9BP1', 'SNORA32', 'C10ORF53', 'KRTAP19-8', 'IFNA16', 'OR2L2', 'TGIF2LX', 'F13B', 'FAM71A', 'OR11L1', 'OR9A2', 'OR8B3', 'TXLNGY', 'ZCCHC13', 'HBG1', 'OR2M3', 'GUCA2B', 'CLEC6A', 'NXF2B', 'OR10V1', 'OR10A5', 'SNORA51', 'OTX2', 'GRIN2B', 'TMPRSS11F', 'WFDC5', 'IL31', 'OR8S1', 'FGF23', 'OR5H14', 'HMHB1', 'PSG7', 'C18ORF42', 'LINC00895', 'MS4A6E', 'PPY', 'GOLGA6D', 'SCGB1C1', 'NOX3', 'KRTAP10-12', 'OR1N1', 'ASB17', 'ADAM18', 'ITLN2', 'RPL13AP17', 'OR1S2', 'KRTAP10-11', 'VWC2L', 'OR2G2', 'OR8G5', 'TAAR9', 'BRDTP1', 'PLG', 'SSX5', 'LEUTX', 'OR4D9', 'PWAR4', 'CRYAA', 'MAGEA10', 'TTTY14', 'TPD52L3', 'HIST1H4F', 'LINC01205', 'GDNF', 'SNORA34', 'CAPZA3', 'POTED', 'GPR52', 'MMP23A', 'LINC00636', 'ARSF', 'TCP10L2', 'SNORD89', 'XAGE5', 'C2ORF83', 'KRTAP12-2', 'COL6A4P1', 'TSGA13', 'LOC391343', 'ALOX12B', 'BTNL3', 'LOC391003', 'CYP11B2', 'CFHR4', 'SNORA70B', 'SFTA3', 'FAM27B', 'FMR1NB', 'HBD', 'RSPH6A', 'OR5T2', 'ANKUB1', 'OR4S1', 'BPIFA3', 'TRIM51', 'CYP2W1', 'OR9G4', 'CASC8', 'OPN1MW', 'SLC38A8', 'SSX8', 'ACTR3BP2', 'PROKR1', 'FOXN3-AS2', 'ARR3', 'OR56A1', 'ACTRT2', 'INSM2', 'P2RX3', 'ARHGAP36', 'HNRNPCL1', 'TBC1D28', 'DMRT1', 'SDR16C6P', 'LINC00469', 'TAS2R60', 'STATH', 'KHDC1L', 'LINC00111', 'SLC13A1', 'ANKRD18DP', 'PF4', 'POTEH', 'C11ORF94', 'RESP18', 'EDDM3A', 'RTP2', 'DAOA', 'ASB18', 'C20ORF173', 'TKTL2', 'ADGRG7', 'OR4C16', 'DEFB126', 'DEFB129', 'GAGE1', 'OR4F5', 'ZIM3', 'IFITM5', 'OR6Y1', 'OR7A17', 'LINC00114', 'SPACA7', 'DUXA', 'OR6B3', 'DEFB104A', 'LHX9', 'SOX3', 'YWHAEP7', 'OR8H2', 'LGI3', 'FAM169B', 'PRAMEF20', 'CTRB1', 'LINC01566', 'KRTAP19-2', 'RGS8', 'MYBPHL', 'KRTAP6-1', 'KRTAP25-1', 'TRPV5', 'LINC00523', 'WFDC8', 'TCP10', 'GAGE2D', 'KCNQ1DN', 'TAS2R13', 'CPLX4', 'OR52H1', 'CLRN2', 'TMEM72', 'HSFY2', 'OR2T35', 'SFTPC', 'OR4K17', 'KRTAP13-1', 'SPANXA2', 'CCKAR', 'MYF5', 'TMEM202', 'GABRG3', 'AVPR1B', 'OR4K2', 'FCAMR', 'ASAP1-IT1', 'INS', 'CGB5', 'MMD2', 'CNTNAP4', 'LCNL1', 'FDCSP', 'KLK9', 'OLFM3', 'GH1', 'MAGEB6', 'CCDC166', 'LINC01101', 'SPDYC', 'MBD3L5', 'CRNN', 'LINC00113', 'CRLF2', 'NEU2', 'BEND2', 'HPD', 'OR8G2', 'OR14I1', 'SVOP', 'FAM71C', 'OLIG1', 'YIPF7', 'TPTE', 'IQCJ', 'OTOL1', 'IZUMO1R', 'LIPN', 'PRDM14', 'CYLC2', 'OR10H2', 'FAM27L', 'LRRTM1', 'OLAH', 'PRKAG3', 'HOXC12', 'PSG11', 'LOC285847', 'TARM1', 'DNTT', 'XAGE3', 'ALPPL2', 'FTMT', 'TCEB3C', 'FRMPD4', 'RHAG', 'SNORD115-26', 'GUCY2EP', 'KRTAP10-7', 'NANOS2', 'KRTAP10-1', 'SCN1A', 'KRT85', 'DEFB110', 'DAW1', 'OR4D6', 'LPO', 'BARHL2', 'OPRD1', 'DISC2', 'OR5H6', 'ABRA', 'OR5M10', 'IL17F', 'UGT2A3', 'C9ORF135', 'XKR7', 'PYDC2', 'UCMA', 'NKX1-2', 'LOC646813', 'OR1L1', 'TFF2', 'F11', 'OR6B2', 'SNORA59B', 'LCE1D', 'C20ORF166-AS1', 'PISRT1', 'TTTY15', 'C1ORF146', 'LCN9', 'TBC1D3P2', 'SNORA16B', 'FBXW12', 'MYBPC2', 'TMEM207', 'EPS8L3', 'SPATA19', 'SLC2A2', 'TTTY9B', 'TTTY8', 'ANXA8L1', 'SBSN', 'ADAM29', 'REG4', 'CHIAP2', 'ANP32D', 'GRK1', 'SPACA3', 'IGLL3P', 'CXADRP2', 'CETN1', 'IL26', 'CGB8', 'OR2M7', 'HBG2', 'FRMPD2B', 'CPLX3', 'OR4C12', 'ZNF679', 'SULT1C3', 'IVL', 'GUCY2F', 'GAGE2B', 'KRTAP21-1', 'SNORD94', 'PCGEM1', 'LMNTD1', 'MAGEA1', 'UGT1A5', 'DEFB134', 'CALR3', 'PSKH2', 'SNCB', 'FKBP6', 'PRAMEF1', 'MOGAT3', 'CYP7A1', 'POM121L2', 'CNGB1', 'GBX2', 'OR1E2', 'OR51I2', 'NYX', 'HAO1', 'LYZL1', 'OR51G2', 'NKX2-1', 'OR52E8', 'ZNF705A', 'OR5M8', 'LOC729609', 'OR6K6', 'GOLGA6L1', 'LINC00032', 'SATB2-AS1', 'ALX4', 'CCL24', 'FAM74A3', 'LINC00923', 'KCNK4', 'SNORA1', 'SNAR-F', 'SNORA84', 'TMEM88B', 'HTR3E', 'SLITRK3', 'SYCN', 'SLC25A31', 'KRTAP19-6', 'LINC00608', 'IFNA13', 'TSKS', 'SRY', 'TRHR', 'RPL3L', 'MAP3K15', 'BMP15', 'CRYGB', 'KGFLP1', 'ALLC', 'C10ORF120', 'DMRTB1', 'KRTAP2-1', 'NTS', 'INSC', 'DPPA2', 'RAX2', 'MUSK', 'CLRN1-AS1', 'TRIML1', 'TFAMP1', 'DKFZP434K028', 'FFAR1', 'KCNIP4-IT1', 'PROKR2', 'SLC6A5', 'NLRP13', 'POU6F2', 'FAM138D', 'LOC286238', 'OACYLP', 'CT47B1', 'OR1K1', 'GDPD2', 'DEFB123', 'ADGRD2', 'ANGPTL3', 'OR51F2', 'NKX2-3', 'KCNMB2', 'SLC36A3', 'CD200R1L', 'LCN1', 'MGC27382', 'MUC2', 'SPRR2E', 'LINC00520', 'MAGEA9B', 'GAGE12F', 'FOXD4L3', 'KIR3DL3', 'PTX4', 'AKR1C8P', 'CDRT15', 'GCSAML-AS1', 'LINC00575', 'IFNA7', 'LINC00479', 'HGC6.3', 'OR6A2', 'SLC10A1', 'CTRC', 'LINC00202-2', 'OR13C3', 'LINC01565', 'KRT25', 'ARL13A', 'KRTAP19-3', 'PAPOLB', 'MTVR2', 'SLC9C1', 'ADGRG4', 'IL36RN', 'LRRC30', 'KRTAP9-2', 'USP26', 'C12ORF50', 'KRT71', 'TRIM48', 'LHCGR', 'FAM71B', 'USP17L6P', 'BPIFB4', 'C6ORF10', 'OR7D4', 'LINC00303', 'USH1C', 'OCSTAMP', 'EDDM3B', 'CSN3', 'DAZ1', 'KRTAP10-6', 'OR2M4', 'DMRTC1', 'MAGEA6', 'ODF3', 'TNP1', 'AMER3', 'HULC', 'OR10W1', 'OR12D2', 'FOXR1', 'OR7G3', 'SLC17A6', 'PRB4', 'LINC01312', 'RPS4Y2', 'LINC00410', 'GUCA1C', 'KRTAP1-1', 'NKAIN3', 'NEUROD1', 'AQP2', 'XIRP2', 'CER1', 'SPOCK3', 'ACSM4', 'FAM170B', 'SPZ1', 'OR5M3', 'GKN2', 'KRTAP4-3', 'KRTAP1-5', 'FAM224B', 'ACSM2B', 'CRYGC', 'BTF3P11', 'OVCH1', 'BCYRN1', 'POTEG', 'BTN1A1', 'OR51B5', 'CHRNB3', 'GNAT3', 'FAM205A', 'LOC647859', 'HTR1A', 'PTH2', 'CALCB', 'SLC5A8', 'SLC5A7', 'OR1L4', 'LINC00304', 'TDH', 'HBE1', 'DMP1', 'MAGEB3', 'CNTN5', 'FAM19A1', 'OR2T10', 'FAM19A4', 'OR2AG1', 'FBXO47', 'HCRTR1', 'SHH', 'KCNG4', 'PRAC1', 'OR51M1', 'NLRP8', 'SHD', 'BPIFB3', 'SPANXN3', 'AHSG', 'OR13H1', 'SSX9', 'SERPINB12', 'LOC284798', 'LINC00671', 'NUTM1', 'KRT83', 'RFX6', 'SCTR', 'NCAN', 'LINC01142', 'OR7G2', 'AATK-AS1', 'H3F3AP5', 'SLC22A10', 'KRTAP11-1', 'FAM138B', 'C2ORF27B', 'GPHA2', 'DSCR10', 'CRISP2', 'UROC1', 'PPP1R2P9', 'DCT', 'PRL', 'POU4F2', 'HTR2C', 'NYAP2', 'SNORA76C', 'AVP', 'OR2G6', 'PTCHD3', 'AADACL3', 'TMEM14E', 'CLEC4G', 'HIST1H3A', 'PCP4', 'PPY2P', 'UGT1A4', 'GPR22', 'OR5H2', 'AIRE', 'KLRC4', 'OR2L8', 'AKR1D1', 'KCNJ16', 'TRIM75P', 'TRIM55', 'ARL14', 'CPA2', 'NF1P2', 'ISL1', 'ASB15', 'SPATA22', 'SPATA3', 'SSTR3', 'HIST2H2AB', 'OR2A14', 'LINC00207', 'IFNW1', 'SPATA45', 'CNGA2', 'POU4F3', 'SLC22A13', 'C16ORF90', 'GFI1B', 'APCS', 'C6ORF118', 'LOC145845', 'SNORA71B', 'SNORA62', 'PPAN-P2RY11', 'PCDH8', 'SNORA80E', 'FOXE3', 'NXPE1', 'UGT2B10', 'DEFB131', 'CACNG7', 'PRO0611', 'DEFB118', 'PCSK2', 'USP50', 'FAM170A', 'GNAS-AS1', 'LOC392196', 'ZFY', 'LOC400794', 'C1ORF140', 'CT47A6', 'MYH16', 'MIR1-1HG', 'C1ORF94', 'CGB2', 'CT47A7', 'MYL2', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 5.524028588498764e-15 NRMSE: 8.795943741439387e-16 MAPE: 5.792413178625105e-12 Pearson Correlation: 0.34177746701332273 Spearman Correlation: 0.2917816930385666 Coefficient of Determination: -4.011906024178598 RMSE: 2.1078523074102993 NRMSE: 0.414393171747395 MAPE: 742.0944162696566 Predictor: ElasticNet Pearson Correlation: 0.9077222902562047 Spearman Correlation: 0.8918086574358361 Coefficient of Determination: 0.8015154684461061 RMSE: 0.5233514269648948 NRMSE: 0.08333356054980649 MAPE: 241.74495370507998 Pearson Correlation: 0.37319134456486425 Spearman Correlation: 0.3551091659497002 Coefficient of Determination: -0.0017820021866139513 RMSE: 0.9423784157213578 NRMSE: 0.185266861109849 MAPE: 286.60696173425 Predictor: RandomForests Pearson Correlation: 0.7521519829563229 Spearman Correlation: 0.6827408320707337 Coefficient of Determination: 0.5613737681582754 RMSE: 0.777996028062923 NRMSE: 0.12388077259687955 MAPE: 183.60587603365084 Pearson Correlation: 0.7300270358723214 Spearman Correlation: 0.5067613315463262 Coefficient of Determination: 0.5285386408754698 RMSE: 0.6464899380025885 NRMSE: 0.12709667322034138 MAPE: 144.5833121592465 Protein: CDH2 x_train_column_count: 482 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'LINC00200', 'OR52B4', 'OR4F15', 'OR8J3', 'HTR5A', 'DAZL', 'RAB9BP1', 'SNORA32', 'C10ORF53', 'KRTAP19-8', 'IFNA16', 'OR2L2', 'TGIF2LX', 'F13B', 'FAM71A', 'OR11L1', 'OR9A2', 'OR8B3', 'TXLNGY', 'ZCCHC13', 'HBG1', 'OR2M3', 'GUCA2B', 'CLEC6A', 'NXF2B', 'OR10V1', 'OR10A5', 'SNORA51', 'OTX2', 'GRIN2B', 'TMPRSS11F', 'WFDC5', 'IL31', 'OR8S1', 'FGF23', 'OR5H14', 'HMHB1', 'PSG7', 'C18ORF42', 'LINC00895', 'MS4A6E', 'PPY', 'GOLGA6D', 'SCGB1C1', 'NOX3', 'KRTAP10-12', 'OR1N1', 'ASB17', 'ADAM18', 'ITLN2', 'RPL13AP17', 'OR1S2', 'KRTAP10-11', 'VWC2L', 'OR2G2', 'OR8G5', 'TAAR9', 'BRDTP1', 'PLG', 'SSX5', 'LEUTX', 'OR4D9', 'PWAR4', 'CRYAA', 'MAGEA10', 'TTTY14', 'TPD52L3', 'HIST1H4F', 'LINC01205', 'GDNF', 'SNORA34', 'CAPZA3', 'POTED', 'GPR52', 'MMP23A', 'LINC00636', 'ARSF', 'TCP10L2', 'SNORD89', 'XAGE5', 'C2ORF83', 'KRTAP12-2', 'COL6A4P1', 'TSGA13', 'LOC391343', 'ALOX12B', 'BTNL3', 'LOC391003', 'CYP11B2', 'CFHR4', 'SNORA70B', 'SFTA3', 'FAM27B', 'FMR1NB', 'HBD', 'RSPH6A', 'OR5T2', 'ANKUB1', 'OR4S1', 'BPIFA3', 'TRIM51', 'CYP2W1', 'OR9G4', 'CASC8', 'OPN1MW', 'SLC38A8', 'SSX8', 'ACTR3BP2', 'PROKR1', 'FOXN3-AS2', 'ARR3', 'OR56A1', 'ACTRT2', 'INSM2', 'P2RX3', 'ARHGAP36', 'HNRNPCL1', 'TBC1D28', 'DMRT1', 'SDR16C6P', 'LINC00469', 'TAS2R60', 'STATH', 'KHDC1L', 'LINC00111', 'SLC13A1', 'ANKRD18DP', 'PF4', 'POTEH', 'C11ORF94', 'RESP18', 'EDDM3A', 'RTP2', 'DAOA', 'ASB18', 'C20ORF173', 'TKTL2', 'ADGRG7', 'OR4C16', 'DEFB126', 'DEFB129', 'GAGE1', 'OR4F5', 'ZIM3', 'IFITM5', 'OR6Y1', 'OR7A17', 'LINC00114', 'SPACA7', 'DUXA', 'OR6B3', 'DEFB104A', 'LHX9', 'SOX3', 'YWHAEP7', 'OR8H2', 'LGI3', 'FAM169B', 'PRAMEF20', 'CTRB1', 'LINC01566', 'KRTAP19-2', 'RGS8', 'MYBPHL', 'KRTAP6-1', 'KRTAP25-1', 'TRPV5', 'LINC00523', 'WFDC8', 'TCP10', 'GAGE2D', 'KCNQ1DN', 'TAS2R13', 'CPLX4', 'OR52H1', 'CLRN2', 'TMEM72', 'HSFY2', 'OR2T35', 'SFTPC', 'OR4K17', 'KRTAP13-1', 'SPANXA2', 'CCKAR', 'MYF5', 'TMEM202', 'GABRG3', 'AVPR1B', 'OR4K2', 'FCAMR', 'ASAP1-IT1', 'INS', 'CGB5', 'MMD2', 'CNTNAP4', 'LCNL1', 'FDCSP', 'KLK9', 'OLFM3', 'GH1', 'MAGEB6', 'CCDC166', 'LINC01101', 'SPDYC', 'MBD3L5', 'CRNN', 'LINC00113', 'CRLF2', 'NEU2', 'BEND2', 'HPD', 'OR8G2', 'OR14I1', 'SVOP', 'FAM71C', 'OLIG1', 'YIPF7', 'TPTE', 'IQCJ', 'OTOL1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.944837213912435 Spearman Correlation: 0.9203531731579715 Coefficient of Determination: 0.8927062386789633 RMSE: 0.12487726538903755 NRMSE: 0.04524866489928167 MAPE: 184.53947740941365 Pearson Correlation: 0.015231876760113736 Spearman Correlation: 0.018835646329754735 Coefficient of Determination: -1280325.923167207 RMSE: 375.638689517949 NRMSE: 197.9254165268347 MAPE: 41292.76370426067 Predictor: ElasticNet Pearson Correlation: 0.723220491859214 Spearman Correlation: 0.6746963055459276 Coefficient of Determination: 0.4641410829095247 RMSE: 0.2790752842105039 NRMSE: 0.10112156105895498 MAPE: 312.5340111466861 Pearson Correlation: -0.012747974360724317 Spearman Correlation: 0.002571104377860073 Coefficient of Determination: -0.07674086885496179 RMSE: 0.3444811612245911 NRMSE: 0.1815083994902687 MAPE: 2349.838934478684 Predictor: RandomForests Pearson Correlation: 0.5317373792897031 Spearman Correlation: 0.46735021163820406 Coefficient of Determination: 0.15870000479660196 RMSE: 0.34968063961935986 NRMSE: 0.12670506544653956 MAPE: 236.22968448894306 Pearson Correlation: -0.08644078492005822 Spearman Correlation: -0.04854929431704209 Coefficient of Determination: -0.04707572964837037 RMSE: 0.33970264178212556 NRMSE: 0.17899057990079753 MAPE: 1195.6829566884114 Protein: CDH3 x_train_column_count: 77 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.4552478991561304 Spearman Correlation: 0.4556562150707948 Coefficient of Determination: 0.20725064968607032 RMSE: 0.18921203466829145 NRMSE: 0.13274683916224073 MAPE: 380.2683105660067 Pearson Correlation: 0.23229200704466843 Spearman Correlation: 0.3272783949924563 Coefficient of Determination: -0.38196240837178075 RMSE: 0.22139287189636103 NRMSE: 0.1925708002264659 MAPE: 197.55784476597174 Predictor: ElasticNet Pearson Correlation: 0.3623115846441366 Spearman Correlation: 0.3850161919123548 Coefficient of Determination: 0.11953537607410103 RMSE: 0.19940533068034388 NRMSE: 0.13989822268082722 MAPE: 287.09150654600126 Pearson Correlation: 0.23461068123232287 Spearman Correlation: 0.30194640830933056 Coefficient of Determination: 0.04923503800286122 RMSE: 0.18363358099734828 NRMSE: 0.15972720954478092 MAPE: 131.43841722760737 Predictor: RandomForests Pearson Correlation: 0.45840679785656985 Spearman Correlation: 0.49224919938960504 Coefficient of Determination: 0.19716706676528573 RMSE: 0.1904115981886461 NRMSE: 0.1335884255126046 MAPE: 541.3925866510423 Pearson Correlation: 0.3021385045527537 Spearman Correlation: 0.301515371970968 Coefficient of Determination: 0.08017428539122728 RMSE: 0.1806210207833562 NRMSE: 0.1571068400352764 MAPE: 191.81523686251037 Protein: PTEN x_train_column_count: 950 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'LINC00200', 'OR52B4', 'OR4F15', 'OR8J3', 'HTR5A', 'DAZL', 'RAB9BP1', 'SNORA32', 'C10ORF53', 'KRTAP19-8', 'IFNA16', 'OR2L2', 'TGIF2LX', 'F13B', 'FAM71A', 'OR11L1', 'OR9A2', 'OR8B3', 'TXLNGY', 'ZCCHC13', 'HBG1', 'OR2M3', 'GUCA2B', 'CLEC6A', 'NXF2B', 'OR10V1', 'OR10A5', 'SNORA51', 'OTX2', 'GRIN2B', 'TMPRSS11F', 'WFDC5', 'IL31', 'OR8S1', 'FGF23', 'OR5H14', 'HMHB1', 'PSG7', 'C18ORF42', 'LINC00895', 'MS4A6E', 'PPY', 'GOLGA6D', 'SCGB1C1', 'NOX3', 'KRTAP10-12', 'OR1N1', 'ASB17', 'ADAM18', 'ITLN2', 'RPL13AP17', 'OR1S2', 'KRTAP10-11', 'VWC2L', 'OR2G2', 'OR8G5', 'TAAR9', 'BRDTP1', 'PLG', 'SSX5', 'LEUTX', 'OR4D9', 'PWAR4', 'CRYAA', 'MAGEA10', 'TTTY14', 'TPD52L3', 'HIST1H4F', 'LINC01205', 'GDNF', 'SNORA34', 'CAPZA3', 'POTED', 'GPR52', 'MMP23A', 'LINC00636', 'ARSF', 'TCP10L2', 'SNORD89', 'XAGE5', 'C2ORF83', 'KRTAP12-2', 'COL6A4P1', 'TSGA13', 'LOC391343', 'ALOX12B', 'BTNL3', 'LOC391003', 'CYP11B2', 'CFHR4', 'SNORA70B', 'SFTA3', 'FAM27B', 'FMR1NB', 'HBD', 'RSPH6A', 'OR5T2', 'ANKUB1', 'OR4S1', 'BPIFA3', 'TRIM51', 'CYP2W1', 'OR9G4', 'CASC8', 'OPN1MW', 'SLC38A8', 'SSX8', 'ACTR3BP2', 'PROKR1', 'FOXN3-AS2', 'ARR3', 'OR56A1', 'ACTRT2', 'INSM2', 'P2RX3', 'ARHGAP36', 'HNRNPCL1', 'TBC1D28', 'DMRT1', 'SDR16C6P', 'LINC00469', 'TAS2R60', 'STATH', 'KHDC1L', 'LINC00111', 'SLC13A1', 'ANKRD18DP', 'PF4', 'POTEH', 'C11ORF94', 'RESP18', 'EDDM3A', 'RTP2', 'DAOA', 'ASB18', 'C20ORF173', 'TKTL2', 'ADGRG7', 'OR4C16', 'DEFB126', 'DEFB129', 'GAGE1', 'OR4F5', 'ZIM3', 'IFITM5', 'OR6Y1', 'OR7A17', 'LINC00114', 'SPACA7', 'DUXA', 'OR6B3', 'DEFB104A', 'LHX9', 'SOX3', 'YWHAEP7', 'OR8H2', 'LGI3', 'FAM169B', 'PRAMEF20', 'CTRB1', 'LINC01566', 'KRTAP19-2', 'RGS8', 'MYBPHL', 'KRTAP6-1', 'KRTAP25-1', 'TRPV5', 'LINC00523', 'WFDC8', 'TCP10', 'GAGE2D', 'KCNQ1DN', 'TAS2R13', 'CPLX4', 'OR52H1', 'CLRN2', 'TMEM72', 'HSFY2', 'OR2T35', 'SFTPC', 'OR4K17', 'KRTAP13-1', 'SPANXA2', 'CCKAR', 'MYF5', 'TMEM202', 'GABRG3', 'AVPR1B', 'OR4K2', 'FCAMR', 'ASAP1-IT1', 'INS', 'CGB5', 'MMD2', 'CNTNAP4', 'LCNL1', 'FDCSP', 'KLK9', 'OLFM3', 'GH1', 'MAGEB6', 'CCDC166', 'LINC01101', 'SPDYC', 'MBD3L5', 'CRNN', 'LINC00113', 'CRLF2', 'NEU2', 'BEND2', 'HPD', 'OR8G2', 'OR14I1', 'SVOP', 'FAM71C', 'OLIG1', 'YIPF7', 'TPTE', 'IQCJ', 'OTOL1', 'IZUMO1R', 'LIPN', 'PRDM14', 'CYLC2', 'OR10H2', 'FAM27L', 'LRRTM1', 'OLAH', 'PRKAG3', 'HOXC12', 'PSG11', 'LOC285847', 'TARM1', 'DNTT', 'XAGE3', 'ALPPL2', 'FTMT', 'TCEB3C', 'FRMPD4', 'RHAG', 'SNORD115-26', 'GUCY2EP', 'KRTAP10-7', 'NANOS2', 'KRTAP10-1', 'SCN1A', 'KRT85', 'DEFB110', 'DAW1', 'OR4D6', 'LPO', 'BARHL2', 'OPRD1', 'DISC2', 'OR5H6', 'ABRA', 'OR5M10', 'IL17F', 'UGT2A3', 'C9ORF135', 'XKR7', 'PYDC2', 'UCMA', 'NKX1-2', 'LOC646813', 'OR1L1', 'TFF2', 'F11', 'OR6B2', 'SNORA59B', 'LCE1D', 'C20ORF166-AS1', 'PISRT1', 'TTTY15', 'C1ORF146', 'LCN9', 'TBC1D3P2', 'SNORA16B', 'FBXW12', 'MYBPC2', 'TMEM207', 'EPS8L3', 'SPATA19', 'SLC2A2', 'TTTY9B', 'TTTY8', 'ANXA8L1', 'SBSN', 'ADAM29', 'REG4', 'CHIAP2', 'ANP32D', 'GRK1', 'SPACA3', 'IGLL3P', 'CXADRP2', 'CETN1', 'IL26', 'CGB8', 'OR2M7', 'HBG2', 'FRMPD2B', 'CPLX3', 'OR4C12', 'ZNF679', 'SULT1C3', 'IVL', 'GUCY2F', 'GAGE2B', 'KRTAP21-1', 'SNORD94', 'PCGEM1', 'LMNTD1', 'MAGEA1', 'UGT1A5', 'DEFB134', 'CALR3', 'PSKH2', 'SNCB', 'FKBP6', 'PRAMEF1', 'MOGAT3', 'CYP7A1', 'POM121L2', 'CNGB1', 'GBX2', 'OR1E2', 'OR51I2', 'NYX', 'HAO1', 'LYZL1', 'OR51G2', 'NKX2-1', 'OR52E8', 'ZNF705A', 'OR5M8', 'LOC729609', 'OR6K6', 'GOLGA6L1', 'LINC00032', 'SATB2-AS1', 'ALX4', 'CCL24', 'FAM74A3', 'LINC00923', 'KCNK4', 'SNORA1', 'SNAR-F', 'SNORA84', 'TMEM88B', 'HTR3E', 'SLITRK3', 'SYCN', 'SLC25A31', 'KRTAP19-6', 'LINC00608', 'IFNA13', 'TSKS', 'SRY', 'TRHR', 'RPL3L', 'MAP3K15', 'BMP15', 'CRYGB', 'KGFLP1', 'ALLC', 'C10ORF120', 'DMRTB1', 'KRTAP2-1', 'NTS', 'INSC', 'DPPA2', 'RAX2', 'MUSK', 'CLRN1-AS1', 'TRIML1', 'TFAMP1', 'DKFZP434K028', 'FFAR1', 'KCNIP4-IT1', 'PROKR2', 'SLC6A5', 'NLRP13', 'POU6F2', 'FAM138D', 'LOC286238', 'OACYLP', 'CT47B1', 'OR1K1', 'GDPD2', 'DEFB123', 'ADGRD2', 'ANGPTL3', 'OR51F2', 'NKX2-3', 'KCNMB2', 'SLC36A3', 'CD200R1L', 'LCN1', 'MGC27382', 'MUC2', 'SPRR2E', 'LINC00520', 'MAGEA9B', 'GAGE12F', 'FOXD4L3', 'KIR3DL3', 'PTX4', 'AKR1C8P', 'CDRT15', 'GCSAML-AS1', 'LINC00575', 'IFNA7', 'LINC00479', 'HGC6.3', 'OR6A2', 'SLC10A1', 'CTRC', 'LINC00202-2', 'OR13C3', 'LINC01565', 'KRT25', 'ARL13A', 'KRTAP19-3', 'PAPOLB', 'MTVR2', 'SLC9C1', 'ADGRG4', 'IL36RN', 'LRRC30', 'KRTAP9-2', 'USP26', 'C12ORF50', 'KRT71', 'TRIM48', 'LHCGR', 'FAM71B', 'USP17L6P', 'BPIFB4', 'C6ORF10', 'OR7D4', 'LINC00303', 'USH1C', 'OCSTAMP', 'EDDM3B', 'CSN3', 'DAZ1', 'KRTAP10-6', 'OR2M4', 'DMRTC1', 'MAGEA6', 'ODF3', 'TNP1', 'AMER3', 'HULC', 'OR10W1', 'OR12D2', 'FOXR1', 'OR7G3', 'SLC17A6', 'PRB4', 'LINC01312', 'RPS4Y2', 'LINC00410', 'GUCA1C', 'KRTAP1-1', 'NKAIN3', 'NEUROD1', 'AQP2', 'XIRP2', 'CER1', 'SPOCK3', 'ACSM4', 'FAM170B', 'SPZ1', 'OR5M3', 'GKN2', 'KRTAP4-3', 'KRTAP1-5', 'FAM224B', 'ACSM2B', 'CRYGC', 'BTF3P11', 'OVCH1', 'BCYRN1', 'POTEG', 'BTN1A1', 'OR51B5', 'CHRNB3', 'GNAT3', 'FAM205A', 'LOC647859', 'HTR1A', 'PTH2', 'CALCB', 'SLC5A8', 'SLC5A7', 'OR1L4', 'LINC00304', 'TDH', 'HBE1', 'DMP1', 'MAGEB3', 'CNTN5', 'FAM19A1', 'OR2T10', 'FAM19A4', 'OR2AG1', 'FBXO47', 'HCRTR1', 'SHH', 'KCNG4', 'PRAC1', 'OR51M1', 'NLRP8', 'SHD', 'BPIFB3', 'SPANXN3', 'AHSG', 'OR13H1', 'SSX9', 'SERPINB12', 'LOC284798', 'LINC00671', 'NUTM1', 'KRT83', 'RFX6', 'SCTR', 'NCAN', 'LINC01142', 'OR7G2', 'AATK-AS1', 'H3F3AP5', 'SLC22A10', 'KRTAP11-1', 'FAM138B', 'C2ORF27B', 'GPHA2', 'DSCR10', 'CRISP2', 'UROC1', 'PPP1R2P9', 'DCT', 'PRL', 'POU4F2', 'HTR2C', 'NYAP2', 'SNORA76C', 'AVP', 'OR2G6', 'PTCHD3', 'AADACL3', 'TMEM14E', 'CLEC4G', 'HIST1H3A', 'PCP4', 'PPY2P', 'UGT1A4', 'GPR22', 'OR5H2', 'AIRE', 'KLRC4', 'OR2L8', 'AKR1D1', 'KCNJ16', 'TRIM75P', 'TRIM55', 'ARL14', 'CPA2', 'NF1P2', 'ISL1', 'ASB15', 'SPATA22', 'SPATA3', 'SSTR3', 'HIST2H2AB', 'OR2A14', 'LINC00207', 'IFNW1', 'SPATA45', 'CNGA2', 'POU4F3', 'SLC22A13', 'C16ORF90', 'GFI1B', 'APCS', 'C6ORF118', 'LOC145845', 'SNORA71B', 'SNORA62', 'PPAN-P2RY11', 'PCDH8', 'SNORA80E', 'FOXE3', 'NXPE1', 'UGT2B10', 'DEFB131', 'CACNG7', 'PRO0611', 'DEFB118', 'PCSK2', 'USP50', 'FAM170A', 'GNAS-AS1', 'LOC392196', 'ZFY', 'LOC400794', 'C1ORF140', 'CT47A6', 'MYH16', 'MIR1-1HG', 'C1ORF94', 'CGB2', 'CT47A7', 'MYL2', 'TMEM132D', 'CA4', 'MAGEA12', 'IGLL1', 'SLC4A9', 'LOC100132831', 'LRRC74A', 'OR10AD1', 'OR4D10', 'CALHM3', 'GH2', 'TDRG1', 'HPVC1', 'TMPRSS11B', 'HBM', 'SLC39A12', 'SLC22A12', 'IFNL1', 'RAPGEF4-AS1', 'ANKRD34C', 'ART1', 'GABRB1', 'OR2A12', 'DNAJC25-GNG10', 'LINC00710', 'ASB10', 'OR2A2', 'ZFAT-AS1', 'LINC00691', 'SH2D7', 'LINC01591', 'LINC00452', 'SCGB3A2', 'FAM47C', 'CSNK1A1P1', 'PRR32', 'SNORA72', 'GPR139', 'NEUROD6', 'KRTAP6-2', 'OR5B17', 'PDX1', 'ADRB3', 'GBA3', 'MTNR1A', 'GPR50', 'SPRR1B', 'MUC13', 'GPR61', 'KRTAP12-1', 'GSC2', 'GPRC6A', 'ANKRD20A20P', 'TRPM3', 'FERD3L', 'VIL1', 'CST9L', 'APOA5', 'NEUROG1', 'B4GALNT2', 'SNORA27', 'LHFPL4', 'C11ORF87', 'PRAMEF16', 'OR51L1', 'NKX6-2', 'SNORA2B', 'PRDM9', 'BANF2', 'PRSS1', 'PRSS57', 'OR51T1', 'VWA5B1', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.850053337675275e-15 NRMSE: 4.456341705379212e-16 MAPE: 3.741858620752533e-12 Pearson Correlation: 0.1368679022981531 Spearman Correlation: 0.09759473310141024 Coefficient of Determination: -4.066293632805446 RMSE: 1.060053386020037 NRMSE: 0.25344364414958087 MAPE: 387.74813365472176 Predictor: ElasticNet Pearson Correlation: 0.8618668871327266 Spearman Correlation: 0.8326005902350556 Coefficient of Determination: 0.7004199000789852 RMSE: 0.3444373914783303 NRMSE: 0.0538562100661919 MAPE: 284.2869614187279 Pearson Correlation: 0.3333169711260669 Spearman Correlation: 0.34728861955884743 Coefficient of Determination: 0.03659537154611758 RMSE: 0.4622606474978051 NRMSE: 0.11051992719786857 MAPE: 122.88462708318042 Predictor: RandomForests Pearson Correlation: 0.5773748229480761 Spearman Correlation: 0.5282493245545491 Coefficient of Determination: 0.2814110918343762 RMSE: 0.5334504251111242 NRMSE: 0.0834102767744702 MAPE: 347.7930583140399 Pearson Correlation: 0.3959342204139854 Spearman Correlation: 0.40638162570605624 Coefficient of Determination: 0.14813424549827459 RMSE: 0.4346784791769532 NRMSE: 0.1039254241804029 MAPE: 117.16991852767853 Protein: BRCA2 x_train_column_count: 380 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'LINC00200', 'OR52B4', 'OR4F15', 'OR8J3', 'HTR5A', 'DAZL', 'RAB9BP1', 'SNORA32', 'C10ORF53', 'KRTAP19-8', 'IFNA16', 'OR2L2', 'TGIF2LX', 'F13B', 'FAM71A', 'OR11L1', 'OR9A2', 'OR8B3', 'TXLNGY', 'ZCCHC13', 'HBG1', 'OR2M3', 'GUCA2B', 'CLEC6A', 'NXF2B', 'OR10V1', 'OR10A5', 'SNORA51', 'OTX2', 'GRIN2B', 'TMPRSS11F', 'WFDC5', 'IL31', 'OR8S1', 'FGF23', 'OR5H14', 'HMHB1', 'PSG7', 'C18ORF42', 'LINC00895', 'MS4A6E', 'PPY', 'GOLGA6D', 'SCGB1C1', 'NOX3', 'KRTAP10-12', 'OR1N1', 'ASB17', 'ADAM18', 'ITLN2', 'RPL13AP17', 'OR1S2', 'KRTAP10-11', 'VWC2L', 'OR2G2', 'OR8G5', 'TAAR9', 'BRDTP1', 'PLG', 'SSX5', 'LEUTX', 'OR4D9', 'PWAR4', 'CRYAA', 'MAGEA10', 'TTTY14', 'TPD52L3', 'HIST1H4F', 'LINC01205', 'GDNF', 'SNORA34', 'CAPZA3', 'POTED', 'GPR52', 'MMP23A', 'LINC00636', 'ARSF', 'TCP10L2', 'SNORD89', 'XAGE5', 'C2ORF83', 'KRTAP12-2', 'COL6A4P1', 'TSGA13', 'LOC391343', 'ALOX12B', 'BTNL3', 'LOC391003', 'CYP11B2', 'CFHR4', 'SNORA70B', 'SFTA3', 'FAM27B', 'FMR1NB', 'HBD', 'RSPH6A', 'OR5T2', 'ANKUB1', 'OR4S1', 'BPIFA3', 'TRIM51', 'CYP2W1', 'OR9G4', 'CASC8', 'OPN1MW', 'SLC38A8', 'SSX8', 'ACTR3BP2', 'PROKR1', 'FOXN3-AS2', 'ARR3', 'OR56A1', 'ACTRT2', 'INSM2', 'P2RX3', 'ARHGAP36', 'HNRNPCL1', 'TBC1D28', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.8494898159198341 Spearman Correlation: 0.8326796486069571 Coefficient of Determination: 0.7216329473515134 RMSE: 0.1002714117801701 NRMSE: 0.06758108792775598 MAPE: 268.03389906284906 Pearson Correlation: -0.02265781568115147 Spearman Correlation: 0.020172321350640284 Coefficient of Determination: -77146.78917410607 RMSE: 59.476052763336284 NRMSE: 40.90822054167529 MAPE: 11140.154223438978 Predictor: ElasticNet Pearson Correlation: 0.5131791591148518 Spearman Correlation: 0.4019031349587193 Coefficient of Determination: 0.18194723664887957 RMSE: 0.17189326947150158 NRMSE: 0.11585290315659395 MAPE: 105.16629411627196 Pearson Correlation: -0.1665389513419802 Spearman Correlation: 0.07330515343084078 Coefficient of Determination: -0.05908868891741781 RMSE: 0.22036700055480254 NRMSE: 0.15157061438953603 MAPE: 149.18349761836473 Predictor: RandomForests Pearson Correlation: 0.48919101726605924 Spearman Correlation: 0.4562047619152324 Coefficient of Determination: 0.14132983469572535 RMSE: 0.17610893909851022 NRMSE: 0.11869418697497522 MAPE: 116.13314714242959 Pearson Correlation: 0.08147583522140009 Spearman Correlation: 0.09097891739056807 Coefficient of Determination: 0.0032318015896283248 RMSE: 0.21378512414309891 NRMSE: 0.14704353434104295 MAPE: 126.85575552764404 Protein: CDKN2A x_train_column_count: 619 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'LINC00200', 'OR52B4', 'OR4F15', 'OR8J3', 'HTR5A', 'DAZL', 'RAB9BP1', 'SNORA32', 'C10ORF53', 'KRTAP19-8', 'IFNA16', 'OR2L2', 'TGIF2LX', 'F13B', 'FAM71A', 'OR11L1', 'OR9A2', 'OR8B3', 'TXLNGY', 'ZCCHC13', 'HBG1', 'OR2M3', 'GUCA2B', 'CLEC6A', 'NXF2B', 'OR10V1', 'OR10A5', 'SNORA51', 'OTX2', 'GRIN2B', 'TMPRSS11F', 'WFDC5', 'IL31', 'OR8S1', 'FGF23', 'OR5H14', 'HMHB1', 'PSG7', 'C18ORF42', 'LINC00895', 'MS4A6E', 'PPY', 'GOLGA6D', 'SCGB1C1', 'NOX3', 'KRTAP10-12', 'OR1N1', 'ASB17', 'ADAM18', 'ITLN2', 'RPL13AP17', 'OR1S2', 'KRTAP10-11', 'VWC2L', 'OR2G2', 'OR8G5', 'TAAR9', 'BRDTP1', 'PLG', 'SSX5', 'LEUTX', 'OR4D9', 'PWAR4', 'CRYAA', 'MAGEA10', 'TTTY14', 'TPD52L3', 'HIST1H4F', 'LINC01205', 'GDNF', 'SNORA34', 'CAPZA3', 'POTED', 'GPR52', 'MMP23A', 'LINC00636', 'ARSF', 'TCP10L2', 'SNORD89', 'XAGE5', 'C2ORF83', 'KRTAP12-2', 'COL6A4P1', 'TSGA13', 'LOC391343', 'ALOX12B', 'BTNL3', 'LOC391003', 'CYP11B2', 'CFHR4', 'SNORA70B', 'SFTA3', 'FAM27B', 'FMR1NB', 'HBD', 'RSPH6A', 'OR5T2', 'ANKUB1', 'OR4S1', 'BPIFA3', 'TRIM51', 'CYP2W1', 'OR9G4', 'CASC8', 'OPN1MW', 'SLC38A8', 'SSX8', 'ACTR3BP2', 'PROKR1', 'FOXN3-AS2', 'ARR3', 'OR56A1', 'ACTRT2', 'INSM2', 'P2RX3', 'ARHGAP36', 'HNRNPCL1', 'TBC1D28', 'DMRT1', 'SDR16C6P', 'LINC00469', 'TAS2R60', 'STATH', 'KHDC1L', 'LINC00111', 'SLC13A1', 'ANKRD18DP', 'PF4', 'POTEH', 'C11ORF94', 'RESP18', 'EDDM3A', 'RTP2', 'DAOA', 'ASB18', 'C20ORF173', 'TKTL2', 'ADGRG7', 'OR4C16', 'DEFB126', 'DEFB129', 'GAGE1', 'OR4F5', 'ZIM3', 'IFITM5', 'OR6Y1', 'OR7A17', 'LINC00114', 'SPACA7', 'DUXA', 'OR6B3', 'DEFB104A', 'LHX9', 'SOX3', 'YWHAEP7', 'OR8H2', 'LGI3', 'FAM169B', 'PRAMEF20', 'CTRB1', 'LINC01566', 'KRTAP19-2', 'RGS8', 'MYBPHL', 'KRTAP6-1', 'KRTAP25-1', 'TRPV5', 'LINC00523', 'WFDC8', 'TCP10', 'GAGE2D', 'KCNQ1DN', 'TAS2R13', 'CPLX4', 'OR52H1', 'CLRN2', 'TMEM72', 'HSFY2', 'OR2T35', 'SFTPC', 'OR4K17', 'KRTAP13-1', 'SPANXA2', 'CCKAR', 'MYF5', 'TMEM202', 'GABRG3', 'AVPR1B', 'OR4K2', 'FCAMR', 'ASAP1-IT1', 'INS', 'CGB5', 'MMD2', 'CNTNAP4', 'LCNL1', 'FDCSP', 'KLK9', 'OLFM3', 'GH1', 'MAGEB6', 'CCDC166', 'LINC01101', 'SPDYC', 'MBD3L5', 'CRNN', 'LINC00113', 'CRLF2', 'NEU2', 'BEND2', 'HPD', 'OR8G2', 'OR14I1', 'SVOP', 'FAM71C', 'OLIG1', 'YIPF7', 'TPTE', 'IQCJ', 'OTOL1', 'IZUMO1R', 'LIPN', 'PRDM14', 'CYLC2', 'OR10H2', 'FAM27L', 'LRRTM1', 'OLAH', 'PRKAG3', 'HOXC12', 'PSG11', 'LOC285847', 'TARM1', 'DNTT', 'XAGE3', 'ALPPL2', 'FTMT', 'TCEB3C', 'FRMPD4', 'RHAG', 'SNORD115-26', 'GUCY2EP', 'KRTAP10-7', 'NANOS2', 'KRTAP10-1', 'SCN1A', 'KRT85', 'DEFB110', 'DAW1', 'OR4D6', 'LPO', 'BARHL2', 'OPRD1', 'DISC2', 'OR5H6', 'ABRA', 'OR5M10', 'IL17F', 'UGT2A3', 'C9ORF135', 'XKR7', 'PYDC2', 'UCMA', 'NKX1-2', 'LOC646813', 'OR1L1', 'TFF2', 'F11', 'OR6B2', 'SNORA59B', 'LCE1D', 'C20ORF166-AS1', 'PISRT1', 'TTTY15', 'C1ORF146', 'LCN9', 'TBC1D3P2', 'SNORA16B', 'FBXW12', 'MYBPC2', 'TMEM207', 'EPS8L3', 'SPATA19', 'SLC2A2', 'TTTY9B', 'TTTY8', 'ANXA8L1', 'SBSN', 'ADAM29', 'REG4', 'CHIAP2', 'ANP32D', 'GRK1', 'SPACA3', 'IGLL3P', 'CXADRP2', 'CETN1', 'IL26', 'CGB8', 'OR2M7', 'HBG2', 'FRMPD2B', 'CPLX3', 'OR4C12', 'ZNF679', 'SULT1C3', 'IVL', 'GUCY2F', 'GAGE2B', 'KRTAP21-1', 'SNORD94', 'PCGEM1', 'LMNTD1', 'MAGEA1', 'UGT1A5', 'DEFB134', 'CALR3', 'PSKH2', 'SNCB', 'FKBP6', 'PRAMEF1', 'MOGAT3', 'CYP7A1', 'POM121L2', 'CNGB1', 'GBX2', 'OR1E2', 'OR51I2', 'NYX', 'HAO1', 'LYZL1', 'OR51G2', 'NKX2-1', 'OR52E8', 'ZNF705A', 'OR5M8', 'LOC729609', 'OR6K6', 'GOLGA6L1', 'LINC00032', 'SATB2-AS1', 'ALX4', 'CCL24', 'FAM74A3', 'LINC00923', 'KCNK4', 'SNORA1', 'SNAR-F', 'SNORA84', 'TMEM88B', 'HTR3E', 'SLITRK3', 'SYCN', 'SLC25A31', 'KRTAP19-6', 'LINC00608', 'IFNA13', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 9.26651592050229e-15 NRMSE: 2.163456275799003e-15 MAPE: 1.1505023547150294e-11 Pearson Correlation: -0.056476579897349805 Spearman Correlation: -0.07247721293282959 Coefficient of Determination: -28.169404698534258 RMSE: 3.545894226941124 NRMSE: 1.094715886184781 MAPE: 1274.4010911454493 Predictor: ElasticNet Pearson Correlation: 0.8683947239738548 Spearman Correlation: 0.828189737151278 Coefficient of Determination: 0.7243124091886253 RMSE: 0.35052352643305856 NRMSE: 0.08183683377686277 MAPE: 214.66594064749822 Pearson Correlation: 0.35561495528734616 Spearman Correlation: 0.3130837042855896 Coefficient of Determination: 0.10938131299541709 RMSE: 0.6195949868750718 NRMSE: 0.19128615568369972 MAPE: 136.32308073725733 Predictor: RandomForests Pearson Correlation: 0.6629891126535916 Spearman Correlation: 0.5681547587609801 Coefficient of Determination: 0.4330200240540818 RMSE: 0.5026809460394429 NRMSE: 0.11736107257177879 MAPE: 206.1356502347852 Pearson Correlation: 0.5972992615086624 Spearman Correlation: 0.547003717161622 Coefficient of Determination: 0.35210562383454136 RMSE: 0.5284624072173522 NRMSE: 0.16315100096241306 MAPE: 105.96323980177796 Protein: TP53 x_train_column_count: 1053 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'LINC00200', 'OR52B4', 'OR4F15', 'OR8J3', 'HTR5A', 'DAZL', 'RAB9BP1', 'SNORA32', 'C10ORF53', 'KRTAP19-8', 'IFNA16', 'OR2L2', 'TGIF2LX', 'F13B', 'FAM71A', 'OR11L1', 'OR9A2', 'OR8B3', 'TXLNGY', 'ZCCHC13', 'HBG1', 'OR2M3', 'GUCA2B', 'CLEC6A', 'NXF2B', 'OR10V1', 'OR10A5', 'SNORA51', 'OTX2', 'GRIN2B', 'TMPRSS11F', 'WFDC5', 'IL31', 'OR8S1', 'FGF23', 'OR5H14', 'HMHB1', 'PSG7', 'C18ORF42', 'LINC00895', 'MS4A6E', 'PPY', 'GOLGA6D', 'SCGB1C1', 'NOX3', 'KRTAP10-12', 'OR1N1', 'ASB17', 'ADAM18', 'ITLN2', 'RPL13AP17', 'OR1S2', 'KRTAP10-11', 'VWC2L', 'OR2G2', 'OR8G5', 'TAAR9', 'BRDTP1', 'PLG', 'SSX5', 'LEUTX', 'OR4D9', 'PWAR4', 'CRYAA', 'MAGEA10', 'TTTY14', 'TPD52L3', 'HIST1H4F', 'LINC01205', 'GDNF', 'SNORA34', 'CAPZA3', 'POTED', 'GPR52', 'MMP23A', 'LINC00636', 'ARSF', 'TCP10L2', 'SNORD89', 'XAGE5', 'C2ORF83', 'KRTAP12-2', 'COL6A4P1', 'TSGA13', 'LOC391343', 'ALOX12B', 'BTNL3', 'LOC391003', 'CYP11B2', 'CFHR4', 'SNORA70B', 'SFTA3', 'FAM27B', 'FMR1NB', 'HBD', 'RSPH6A', 'OR5T2', 'ANKUB1', 'OR4S1', 'BPIFA3', 'TRIM51', 'CYP2W1', 'OR9G4', 'CASC8', 'OPN1MW', 'SLC38A8', 'SSX8', 'ACTR3BP2', 'PROKR1', 'FOXN3-AS2', 'ARR3', 'OR56A1', 'ACTRT2', 'INSM2', 'P2RX3', 'ARHGAP36', 'HNRNPCL1', 'TBC1D28', 'DMRT1', 'SDR16C6P', 'LINC00469', 'TAS2R60', 'STATH', 'KHDC1L', 'LINC00111', 'SLC13A1', 'ANKRD18DP', 'PF4', 'POTEH', 'C11ORF94', 'RESP18', 'EDDM3A', 'RTP2', 'DAOA', 'ASB18', 'C20ORF173', 'TKTL2', 'ADGRG7', 'OR4C16', 'DEFB126', 'DEFB129', 'GAGE1', 'OR4F5', 'ZIM3', 'IFITM5', 'OR6Y1', 'OR7A17', 'LINC00114', 'SPACA7', 'DUXA', 'OR6B3', 'DEFB104A', 'LHX9', 'SOX3', 'YWHAEP7', 'OR8H2', 'LGI3', 'FAM169B', 'PRAMEF20', 'CTRB1', 'LINC01566', 'KRTAP19-2', 'RGS8', 'MYBPHL', 'KRTAP6-1', 'KRTAP25-1', 'TRPV5', 'LINC00523', 'WFDC8', 'TCP10', 'GAGE2D', 'KCNQ1DN', 'TAS2R13', 'CPLX4', 'OR52H1', 'CLRN2', 'TMEM72', 'HSFY2', 'OR2T35', 'SFTPC', 'OR4K17', 'KRTAP13-1', 'SPANXA2', 'CCKAR', 'MYF5', 'TMEM202', 'GABRG3', 'AVPR1B', 'OR4K2', 'FCAMR', 'ASAP1-IT1', 'INS', 'CGB5', 'MMD2', 'CNTNAP4', 'LCNL1', 'FDCSP', 'KLK9', 'OLFM3', 'GH1', 'MAGEB6', 'CCDC166', 'LINC01101', 'SPDYC', 'MBD3L5', 'CRNN', 'LINC00113', 'CRLF2', 'NEU2', 'BEND2', 'HPD', 'OR8G2', 'OR14I1', 'SVOP', 'FAM71C', 'OLIG1', 'YIPF7', 'TPTE', 'IQCJ', 'OTOL1', 'IZUMO1R', 'LIPN', 'PRDM14', 'CYLC2', 'OR10H2', 'FAM27L', 'LRRTM1', 'OLAH', 'PRKAG3', 'HOXC12', 'PSG11', 'LOC285847', 'TARM1', 'DNTT', 'XAGE3', 'ALPPL2', 'FTMT', 'TCEB3C', 'FRMPD4', 'RHAG', 'SNORD115-26', 'GUCY2EP', 'KRTAP10-7', 'NANOS2', 'KRTAP10-1', 'SCN1A', 'KRT85', 'DEFB110', 'DAW1', 'OR4D6', 'LPO', 'BARHL2', 'OPRD1', 'DISC2', 'OR5H6', 'ABRA', 'OR5M10', 'IL17F', 'UGT2A3', 'C9ORF135', 'XKR7', 'PYDC2', 'UCMA', 'NKX1-2', 'LOC646813', 'OR1L1', 'TFF2', 'F11', 'OR6B2', 'SNORA59B', 'LCE1D', 'C20ORF166-AS1', 'PISRT1', 'TTTY15', 'C1ORF146', 'LCN9', 'TBC1D3P2', 'SNORA16B', 'FBXW12', 'MYBPC2', 'TMEM207', 'EPS8L3', 'SPATA19', 'SLC2A2', 'TTTY9B', 'TTTY8', 'ANXA8L1', 'SBSN', 'ADAM29', 'REG4', 'CHIAP2', 'ANP32D', 'GRK1', 'SPACA3', 'IGLL3P', 'CXADRP2', 'CETN1', 'IL26', 'CGB8', 'OR2M7', 'HBG2', 'FRMPD2B', 'CPLX3', 'OR4C12', 'ZNF679', 'SULT1C3', 'IVL', 'GUCY2F', 'GAGE2B', 'KRTAP21-1', 'SNORD94', 'PCGEM1', 'LMNTD1', 'MAGEA1', 'UGT1A5', 'DEFB134', 'CALR3', 'PSKH2', 'SNCB', 'FKBP6', 'PRAMEF1', 'MOGAT3', 'CYP7A1', 'POM121L2', 'CNGB1', 'GBX2', 'OR1E2', 'OR51I2', 'NYX', 'HAO1', 'LYZL1', 'OR51G2', 'NKX2-1', 'OR52E8', 'ZNF705A', 'OR5M8', 'LOC729609', 'OR6K6', 'GOLGA6L1', 'LINC00032', 'SATB2-AS1', 'ALX4', 'CCL24', 'FAM74A3', 'LINC00923', 'KCNK4', 'SNORA1', 'SNAR-F', 'SNORA84', 'TMEM88B', 'HTR3E', 'SLITRK3', 'SYCN', 'SLC25A31', 'KRTAP19-6', 'LINC00608', 'IFNA13', 'TSKS', 'SRY', 'TRHR', 'RPL3L', 'MAP3K15', 'BMP15', 'CRYGB', 'KGFLP1', 'ALLC', 'C10ORF120', 'DMRTB1', 'KRTAP2-1', 'NTS', 'INSC', 'DPPA2', 'RAX2', 'MUSK', 'CLRN1-AS1', 'TRIML1', 'TFAMP1', 'DKFZP434K028', 'FFAR1', 'KCNIP4-IT1', 'PROKR2', 'SLC6A5', 'NLRP13', 'POU6F2', 'FAM138D', 'LOC286238', 'OACYLP', 'CT47B1', 'OR1K1', 'GDPD2', 'DEFB123', 'ADGRD2', 'ANGPTL3', 'OR51F2', 'NKX2-3', 'KCNMB2', 'SLC36A3', 'CD200R1L', 'LCN1', 'MGC27382', 'MUC2', 'SPRR2E', 'LINC00520', 'MAGEA9B', 'GAGE12F', 'FOXD4L3', 'KIR3DL3', 'PTX4', 'AKR1C8P', 'CDRT15', 'GCSAML-AS1', 'LINC00575', 'IFNA7', 'LINC00479', 'HGC6.3', 'OR6A2', 'SLC10A1', 'CTRC', 'LINC00202-2', 'OR13C3', 'LINC01565', 'KRT25', 'ARL13A', 'KRTAP19-3', 'PAPOLB', 'MTVR2', 'SLC9C1', 'ADGRG4', 'IL36RN', 'LRRC30', 'KRTAP9-2', 'USP26', 'C12ORF50', 'KRT71', 'TRIM48', 'LHCGR', 'FAM71B', 'USP17L6P', 'BPIFB4', 'C6ORF10', 'OR7D4', 'LINC00303', 'USH1C', 'OCSTAMP', 'EDDM3B', 'CSN3', 'DAZ1', 'KRTAP10-6', 'OR2M4', 'DMRTC1', 'MAGEA6', 'ODF3', 'TNP1', 'AMER3', 'HULC', 'OR10W1', 'OR12D2', 'FOXR1', 'OR7G3', 'SLC17A6', 'PRB4', 'LINC01312', 'RPS4Y2', 'LINC00410', 'GUCA1C', 'KRTAP1-1', 'NKAIN3', 'NEUROD1', 'AQP2', 'XIRP2', 'CER1', 'SPOCK3', 'ACSM4', 'FAM170B', 'SPZ1', 'OR5M3', 'GKN2', 'KRTAP4-3', 'KRTAP1-5', 'FAM224B', 'ACSM2B', 'CRYGC', 'BTF3P11', 'OVCH1', 'BCYRN1', 'POTEG', 'BTN1A1', 'OR51B5', 'CHRNB3', 'GNAT3', 'FAM205A', 'LOC647859', 'HTR1A', 'PTH2', 'CALCB', 'SLC5A8', 'SLC5A7', 'OR1L4', 'LINC00304', 'TDH', 'HBE1', 'DMP1', 'MAGEB3', 'CNTN5', 'FAM19A1', 'OR2T10', 'FAM19A4', 'OR2AG1', 'FBXO47', 'HCRTR1', 'SHH', 'KCNG4', 'PRAC1', 'OR51M1', 'NLRP8', 'SHD', 'BPIFB3', 'SPANXN3', 'AHSG', 'OR13H1', 'SSX9', 'SERPINB12', 'LOC284798', 'LINC00671', 'NUTM1', 'KRT83', 'RFX6', 'SCTR', 'NCAN', 'LINC01142', 'OR7G2', 'AATK-AS1', 'H3F3AP5', 'SLC22A10', 'KRTAP11-1', 'FAM138B', 'C2ORF27B', 'GPHA2', 'DSCR10', 'CRISP2', 'UROC1', 'PPP1R2P9', 'DCT', 'PRL', 'POU4F2', 'HTR2C', 'NYAP2', 'SNORA76C', 'AVP', 'OR2G6', 'PTCHD3', 'AADACL3', 'TMEM14E', 'CLEC4G', 'HIST1H3A', 'PCP4', 'PPY2P', 'UGT1A4', 'GPR22', 'OR5H2', 'AIRE', 'KLRC4', 'OR2L8', 'AKR1D1', 'KCNJ16', 'TRIM75P', 'TRIM55', 'ARL14', 'CPA2', 'NF1P2', 'ISL1', 'ASB15', 'SPATA22', 'SPATA3', 'SSTR3', 'HIST2H2AB', 'OR2A14', 'LINC00207', 'IFNW1', 'SPATA45', 'CNGA2', 'POU4F3', 'SLC22A13', 'C16ORF90', 'GFI1B', 'APCS', 'C6ORF118', 'LOC145845', 'SNORA71B', 'SNORA62', 'PPAN-P2RY11', 'PCDH8', 'SNORA80E', 'FOXE3', 'NXPE1', 'UGT2B10', 'DEFB131', 'CACNG7', 'PRO0611', 'DEFB118', 'PCSK2', 'USP50', 'FAM170A', 'GNAS-AS1', 'LOC392196', 'ZFY', 'LOC400794', 'C1ORF140', 'CT47A6', 'MYH16', 'MIR1-1HG', 'C1ORF94', 'CGB2', 'CT47A7', 'MYL2', 'TMEM132D', 'CA4', 'MAGEA12', 'IGLL1', 'SLC4A9', 'LOC100132831', 'LRRC74A', 'OR10AD1', 'OR4D10', 'CALHM3', 'GH2', 'TDRG1', 'HPVC1', 'TMPRSS11B', 'HBM', 'SLC39A12', 'SLC22A12', 'IFNL1', 'RAPGEF4-AS1', 'ANKRD34C', 'ART1', 'GABRB1', 'OR2A12', 'DNAJC25-GNG10', 'LINC00710', 'ASB10', 'OR2A2', 'ZFAT-AS1', 'LINC00691', 'SH2D7', 'LINC01591', 'LINC00452', 'SCGB3A2', 'FAM47C', 'CSNK1A1P1', 'PRR32', 'SNORA72', 'GPR139', 'NEUROD6', 'KRTAP6-2', 'OR5B17', 'PDX1', 'ADRB3', 'GBA3', 'MTNR1A', 'GPR50', 'SPRR1B', 'MUC13', 'GPR61', 'KRTAP12-1', 'GSC2', 'GPRC6A', 'ANKRD20A20P', 'TRPM3', 'FERD3L', 'VIL1', 'CST9L', 'APOA5', 'NEUROG1', 'B4GALNT2', 'SNORA27', 'LHFPL4', 'C11ORF87', 'PRAMEF16', 'OR51L1', 'NKX6-2', 'SNORA2B', 'PRDM9', 'BANF2', 'PRSS1', 'PRSS57', 'OR51T1', 'VWA5B1', 'ZSCAN10', 'TKTL1', 'VSTM5', 'OTOP1', 'PRSS48', 'PAEP', 'SERPINB11', 'LINC00336', 'SPINK14', 'SNORA16A', 'RAET1L', 'SST', 'SSX2', 'CDHR5', 'NPSR1-AS1', 'C4ORF50', 'FOXG1', 'B3GALT1', 'TMEM252', 'PSAPL1', 'GOLGA2P6', 'PACRG-AS1', 'INS-IGF2', 'ZG16', 'MT1B', 'BET1P1', 'ITPK1-AS1', 'HYMAI', 'NHLH2', 'FAM71E2', 'FEZF1', 'OR52K2', 'NPY', 'MEP1A', 'OR2T2', 'SYT14P1', 'ADGRE3', 'OR3A2', 'SCARNA8', 'TRIM49', 'TRIM49D2', 'CLLU1', 'MAGEA11', 'OR2K2', 'BAGE', 'C9ORF171', 'NPSR1', 'CLEC4M', 'GJB4', 'ACTL7B', 'LINC00244', 'CPN1', 'OTC', 'CTRB2', 'FRMPD2', 'C1ORF158', 'SPINT3', 'GCGR', 'OR4D1', 'SNORA67', 'GCKR', 'C17ORF78', 'SNORA38', 'NPPC', 'MBL2', 'KLK13', 'KRTAP3-2', 'TAS2R42', 'CCER1', 'RNF222', 'SLCO1A2', 'DACH2', 'IFNL2', 'CACNG3', 'PASD1', 'LOC100130264', 'IL13', 'FER1L6', 'DMRTC2', 'CYP1A2', 'OPRM1', 'OR12D3', 'FAM9B', 'FRG2DP', 'CMTM5', 'TNP2', 'TP53TG5', 'LINC00964', 'CHRNA9', 'MAS1L', 'CCDC54', 'F2', 'C12ORF56', 'CLRN1', 'S100A12', 'OR5M1', 'CYP2A7', 'OR5K1', 'POU4F1', 'ATOH7', 'VCX3A', 'MYADML', 'SLITRK1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.832002186906911e-15 NRMSE: 4.4027930471206706e-16 MAPE: 6.545408443832372e-12 Pearson Correlation: 0.16545161345120193 Spearman Correlation: 0.08004837965560668 Coefficient of Determination: -1.0673370606097579 RMSE: 0.6189088313450309 NRMSE: 0.2307905952384619 MAPE: 915.3536634574035 Predictor: ElasticNet Pearson Correlation: 0.8748082779178036 Spearman Correlation: 0.800564542842555 Coefficient of Determination: 0.7240062754665688 RMSE: 0.236467234678122 NRMSE: 0.056829424339851484 MAPE: 476.4810015979293 Pearson Correlation: 0.3721620933199065 Spearman Correlation: 0.3661915983989826 Coefficient of Determination: 0.12479197740589232 RMSE: 0.40269541019148625 NRMSE: 0.15016478794770693 MAPE: 453.65213563624394 Predictor: RandomForests Pearson Correlation: 0.6644503413671478 Spearman Correlation: 0.544360907093898 Coefficient of Determination: 0.37944533660549906 RMSE: 0.35457767729180817 NRMSE: 0.08521453431670468 MAPE: 500.36145296381795 Pearson Correlation: 0.44740685341985637 Spearman Correlation: 0.38969409967952806 Coefficient of Determination: 0.18500512890703014 RMSE: 0.3885961311948405 NRMSE: 0.1449071783818564 MAPE: 369.7703007666136 Protein: CTNNB1 x_train_column_count: 1053 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'LINC00200', 'OR52B4', 'OR4F15', 'OR8J3', 'HTR5A', 'DAZL', 'RAB9BP1', 'SNORA32', 'C10ORF53', 'KRTAP19-8', 'IFNA16', 'OR2L2', 'TGIF2LX', 'F13B', 'FAM71A', 'OR11L1', 'OR9A2', 'OR8B3', 'TXLNGY', 'ZCCHC13', 'HBG1', 'OR2M3', 'GUCA2B', 'CLEC6A', 'NXF2B', 'OR10V1', 'OR10A5', 'SNORA51', 'OTX2', 'GRIN2B', 'TMPRSS11F', 'WFDC5', 'IL31', 'OR8S1', 'FGF23', 'OR5H14', 'HMHB1', 'PSG7', 'C18ORF42', 'LINC00895', 'MS4A6E', 'PPY', 'GOLGA6D', 'SCGB1C1', 'NOX3', 'KRTAP10-12', 'OR1N1', 'ASB17', 'ADAM18', 'ITLN2', 'RPL13AP17', 'OR1S2', 'KRTAP10-11', 'VWC2L', 'OR2G2', 'OR8G5', 'TAAR9', 'BRDTP1', 'PLG', 'SSX5', 'LEUTX', 'OR4D9', 'PWAR4', 'CRYAA', 'MAGEA10', 'TTTY14', 'TPD52L3', 'HIST1H4F', 'LINC01205', 'GDNF', 'SNORA34', 'CAPZA3', 'POTED', 'GPR52', 'MMP23A', 'LINC00636', 'ARSF', 'TCP10L2', 'SNORD89', 'XAGE5', 'C2ORF83', 'KRTAP12-2', 'COL6A4P1', 'TSGA13', 'LOC391343', 'ALOX12B', 'BTNL3', 'LOC391003', 'CYP11B2', 'CFHR4', 'SNORA70B', 'SFTA3', 'FAM27B', 'FMR1NB', 'HBD', 'RSPH6A', 'OR5T2', 'ANKUB1', 'OR4S1', 'BPIFA3', 'TRIM51', 'CYP2W1', 'OR9G4', 'CASC8', 'OPN1MW', 'SLC38A8', 'SSX8', 'ACTR3BP2', 'PROKR1', 'FOXN3-AS2', 'ARR3', 'OR56A1', 'ACTRT2', 'INSM2', 'P2RX3', 'ARHGAP36', 'HNRNPCL1', 'TBC1D28', 'DMRT1', 'SDR16C6P', 'LINC00469', 'TAS2R60', 'STATH', 'KHDC1L', 'LINC00111', 'SLC13A1', 'ANKRD18DP', 'PF4', 'POTEH', 'C11ORF94', 'RESP18', 'EDDM3A', 'RTP2', 'DAOA', 'ASB18', 'C20ORF173', 'TKTL2', 'ADGRG7', 'OR4C16', 'DEFB126', 'DEFB129', 'GAGE1', 'OR4F5', 'ZIM3', 'IFITM5', 'OR6Y1', 'OR7A17', 'LINC00114', 'SPACA7', 'DUXA', 'OR6B3', 'DEFB104A', 'LHX9', 'SOX3', 'YWHAEP7', 'OR8H2', 'LGI3', 'FAM169B', 'PRAMEF20', 'CTRB1', 'LINC01566', 'KRTAP19-2', 'RGS8', 'MYBPHL', 'KRTAP6-1', 'KRTAP25-1', 'TRPV5', 'LINC00523', 'WFDC8', 'TCP10', 'GAGE2D', 'KCNQ1DN', 'TAS2R13', 'CPLX4', 'OR52H1', 'CLRN2', 'TMEM72', 'HSFY2', 'OR2T35', 'SFTPC', 'OR4K17', 'KRTAP13-1', 'SPANXA2', 'CCKAR', 'MYF5', 'TMEM202', 'GABRG3', 'AVPR1B', 'OR4K2', 'FCAMR', 'ASAP1-IT1', 'INS', 'CGB5', 'MMD2', 'CNTNAP4', 'LCNL1', 'FDCSP', 'KLK9', 'OLFM3', 'GH1', 'MAGEB6', 'CCDC166', 'LINC01101', 'SPDYC', 'MBD3L5', 'CRNN', 'LINC00113', 'CRLF2', 'NEU2', 'BEND2', 'HPD', 'OR8G2', 'OR14I1', 'SVOP', 'FAM71C', 'OLIG1', 'YIPF7', 'TPTE', 'IQCJ', 'OTOL1', 'IZUMO1R', 'LIPN', 'PRDM14', 'CYLC2', 'OR10H2', 'FAM27L', 'LRRTM1', 'OLAH', 'PRKAG3', 'HOXC12', 'PSG11', 'LOC285847', 'TARM1', 'DNTT', 'XAGE3', 'ALPPL2', 'FTMT', 'TCEB3C', 'FRMPD4', 'RHAG', 'SNORD115-26', 'GUCY2EP', 'KRTAP10-7', 'NANOS2', 'KRTAP10-1', 'SCN1A', 'KRT85', 'DEFB110', 'DAW1', 'OR4D6', 'LPO', 'BARHL2', 'OPRD1', 'DISC2', 'OR5H6', 'ABRA', 'OR5M10', 'IL17F', 'UGT2A3', 'C9ORF135', 'XKR7', 'PYDC2', 'UCMA', 'NKX1-2', 'LOC646813', 'OR1L1', 'TFF2', 'F11', 'OR6B2', 'SNORA59B', 'LCE1D', 'C20ORF166-AS1', 'PISRT1', 'TTTY15', 'C1ORF146', 'LCN9', 'TBC1D3P2', 'SNORA16B', 'FBXW12', 'MYBPC2', 'TMEM207', 'EPS8L3', 'SPATA19', 'SLC2A2', 'TTTY9B', 'TTTY8', 'ANXA8L1', 'SBSN', 'ADAM29', 'REG4', 'CHIAP2', 'ANP32D', 'GRK1', 'SPACA3', 'IGLL3P', 'CXADRP2', 'CETN1', 'IL26', 'CGB8', 'OR2M7', 'HBG2', 'FRMPD2B', 'CPLX3', 'OR4C12', 'ZNF679', 'SULT1C3', 'IVL', 'GUCY2F', 'GAGE2B', 'KRTAP21-1', 'SNORD94', 'PCGEM1', 'LMNTD1', 'MAGEA1', 'UGT1A5', 'DEFB134', 'CALR3', 'PSKH2', 'SNCB', 'FKBP6', 'PRAMEF1', 'MOGAT3', 'CYP7A1', 'POM121L2', 'CNGB1', 'GBX2', 'OR1E2', 'OR51I2', 'NYX', 'HAO1', 'LYZL1', 'OR51G2', 'NKX2-1', 'OR52E8', 'ZNF705A', 'OR5M8', 'LOC729609', 'OR6K6', 'GOLGA6L1', 'LINC00032', 'SATB2-AS1', 'ALX4', 'CCL24', 'FAM74A3', 'LINC00923', 'KCNK4', 'SNORA1', 'SNAR-F', 'SNORA84', 'TMEM88B', 'HTR3E', 'SLITRK3', 'SYCN', 'SLC25A31', 'KRTAP19-6', 'LINC00608', 'IFNA13', 'TSKS', 'SRY', 'TRHR', 'RPL3L', 'MAP3K15', 'BMP15', 'CRYGB', 'KGFLP1', 'ALLC', 'C10ORF120', 'DMRTB1', 'KRTAP2-1', 'NTS', 'INSC', 'DPPA2', 'RAX2', 'MUSK', 'CLRN1-AS1', 'TRIML1', 'TFAMP1', 'DKFZP434K028', 'FFAR1', 'KCNIP4-IT1', 'PROKR2', 'SLC6A5', 'NLRP13', 'POU6F2', 'FAM138D', 'LOC286238', 'OACYLP', 'CT47B1', 'OR1K1', 'GDPD2', 'DEFB123', 'ADGRD2', 'ANGPTL3', 'OR51F2', 'NKX2-3', 'KCNMB2', 'SLC36A3', 'CD200R1L', 'LCN1', 'MGC27382', 'MUC2', 'SPRR2E', 'LINC00520', 'MAGEA9B', 'GAGE12F', 'FOXD4L3', 'KIR3DL3', 'PTX4', 'AKR1C8P', 'CDRT15', 'GCSAML-AS1', 'LINC00575', 'IFNA7', 'LINC00479', 'HGC6.3', 'OR6A2', 'SLC10A1', 'CTRC', 'LINC00202-2', 'OR13C3', 'LINC01565', 'KRT25', 'ARL13A', 'KRTAP19-3', 'PAPOLB', 'MTVR2', 'SLC9C1', 'ADGRG4', 'IL36RN', 'LRRC30', 'KRTAP9-2', 'USP26', 'C12ORF50', 'KRT71', 'TRIM48', 'LHCGR', 'FAM71B', 'USP17L6P', 'BPIFB4', 'C6ORF10', 'OR7D4', 'LINC00303', 'USH1C', 'OCSTAMP', 'EDDM3B', 'CSN3', 'DAZ1', 'KRTAP10-6', 'OR2M4', 'DMRTC1', 'MAGEA6', 'ODF3', 'TNP1', 'AMER3', 'HULC', 'OR10W1', 'OR12D2', 'FOXR1', 'OR7G3', 'SLC17A6', 'PRB4', 'LINC01312', 'RPS4Y2', 'LINC00410', 'GUCA1C', 'KRTAP1-1', 'NKAIN3', 'NEUROD1', 'AQP2', 'XIRP2', 'CER1', 'SPOCK3', 'ACSM4', 'FAM170B', 'SPZ1', 'OR5M3', 'GKN2', 'KRTAP4-3', 'KRTAP1-5', 'FAM224B', 'ACSM2B', 'CRYGC', 'BTF3P11', 'OVCH1', 'BCYRN1', 'POTEG', 'BTN1A1', 'OR51B5', 'CHRNB3', 'GNAT3', 'FAM205A', 'LOC647859', 'HTR1A', 'PTH2', 'CALCB', 'SLC5A8', 'SLC5A7', 'OR1L4', 'LINC00304', 'TDH', 'HBE1', 'DMP1', 'MAGEB3', 'CNTN5', 'FAM19A1', 'OR2T10', 'FAM19A4', 'OR2AG1', 'FBXO47', 'HCRTR1', 'SHH', 'KCNG4', 'PRAC1', 'OR51M1', 'NLRP8', 'SHD', 'BPIFB3', 'SPANXN3', 'AHSG', 'OR13H1', 'SSX9', 'SERPINB12', 'LOC284798', 'LINC00671', 'NUTM1', 'KRT83', 'RFX6', 'SCTR', 'NCAN', 'LINC01142', 'OR7G2', 'AATK-AS1', 'H3F3AP5', 'SLC22A10', 'KRTAP11-1', 'FAM138B', 'C2ORF27B', 'GPHA2', 'DSCR10', 'CRISP2', 'UROC1', 'PPP1R2P9', 'DCT', 'PRL', 'POU4F2', 'HTR2C', 'NYAP2', 'SNORA76C', 'AVP', 'OR2G6', 'PTCHD3', 'AADACL3', 'TMEM14E', 'CLEC4G', 'HIST1H3A', 'PCP4', 'PPY2P', 'UGT1A4', 'GPR22', 'OR5H2', 'AIRE', 'KLRC4', 'OR2L8', 'AKR1D1', 'KCNJ16', 'TRIM75P', 'TRIM55', 'ARL14', 'CPA2', 'NF1P2', 'ISL1', 'ASB15', 'SPATA22', 'SPATA3', 'SSTR3', 'HIST2H2AB', 'OR2A14', 'LINC00207', 'IFNW1', 'SPATA45', 'CNGA2', 'POU4F3', 'SLC22A13', 'C16ORF90', 'GFI1B', 'APCS', 'C6ORF118', 'LOC145845', 'SNORA71B', 'SNORA62', 'PPAN-P2RY11', 'PCDH8', 'SNORA80E', 'FOXE3', 'NXPE1', 'UGT2B10', 'DEFB131', 'CACNG7', 'PRO0611', 'DEFB118', 'PCSK2', 'USP50', 'FAM170A', 'GNAS-AS1', 'LOC392196', 'ZFY', 'LOC400794', 'C1ORF140', 'CT47A6', 'MYH16', 'MIR1-1HG', 'C1ORF94', 'CGB2', 'CT47A7', 'MYL2', 'TMEM132D', 'CA4', 'MAGEA12', 'IGLL1', 'SLC4A9', 'LOC100132831', 'LRRC74A', 'OR10AD1', 'OR4D10', 'CALHM3', 'GH2', 'TDRG1', 'HPVC1', 'TMPRSS11B', 'HBM', 'SLC39A12', 'SLC22A12', 'IFNL1', 'RAPGEF4-AS1', 'ANKRD34C', 'ART1', 'GABRB1', 'OR2A12', 'DNAJC25-GNG10', 'LINC00710', 'ASB10', 'OR2A2', 'ZFAT-AS1', 'LINC00691', 'SH2D7', 'LINC01591', 'LINC00452', 'SCGB3A2', 'FAM47C', 'CSNK1A1P1', 'PRR32', 'SNORA72', 'GPR139', 'NEUROD6', 'KRTAP6-2', 'OR5B17', 'PDX1', 'ADRB3', 'GBA3', 'MTNR1A', 'GPR50', 'SPRR1B', 'MUC13', 'GPR61', 'KRTAP12-1', 'GSC2', 'GPRC6A', 'ANKRD20A20P', 'TRPM3', 'FERD3L', 'VIL1', 'CST9L', 'APOA5', 'NEUROG1', 'B4GALNT2', 'SNORA27', 'LHFPL4', 'C11ORF87', 'PRAMEF16', 'OR51L1', 'NKX6-2', 'SNORA2B', 'PRDM9', 'BANF2', 'PRSS1', 'PRSS57', 'OR51T1', 'VWA5B1', 'ZSCAN10', 'TKTL1', 'VSTM5', 'OTOP1', 'PRSS48', 'PAEP', 'SERPINB11', 'LINC00336', 'SPINK14', 'SNORA16A', 'RAET1L', 'SST', 'SSX2', 'CDHR5', 'NPSR1-AS1', 'C4ORF50', 'FOXG1', 'B3GALT1', 'TMEM252', 'PSAPL1', 'GOLGA2P6', 'PACRG-AS1', 'INS-IGF2', 'ZG16', 'MT1B', 'BET1P1', 'ITPK1-AS1', 'HYMAI', 'NHLH2', 'FAM71E2', 'FEZF1', 'OR52K2', 'NPY', 'MEP1A', 'OR2T2', 'SYT14P1', 'ADGRE3', 'OR3A2', 'SCARNA8', 'TRIM49', 'TRIM49D2', 'CLLU1', 'MAGEA11', 'OR2K2', 'BAGE', 'C9ORF171', 'NPSR1', 'CLEC4M', 'GJB4', 'ACTL7B', 'LINC00244', 'CPN1', 'OTC', 'CTRB2', 'FRMPD2', 'C1ORF158', 'SPINT3', 'GCGR', 'OR4D1', 'SNORA67', 'GCKR', 'C17ORF78', 'SNORA38', 'NPPC', 'MBL2', 'KLK13', 'KRTAP3-2', 'TAS2R42', 'CCER1', 'RNF222', 'SLCO1A2', 'DACH2', 'IFNL2', 'CACNG3', 'PASD1', 'LOC100130264', 'IL13', 'FER1L6', 'DMRTC2', 'CYP1A2', 'OPRM1', 'OR12D3', 'FAM9B', 'FRG2DP', 'CMTM5', 'TNP2', 'TP53TG5', 'LINC00964', 'CHRNA9', 'MAS1L', 'CCDC54', 'F2', 'C12ORF56', 'CLRN1', 'S100A12', 'OR5M1', 'CYP2A7', 'OR5K1', 'POU4F1', 'ATOH7', 'VCX3A', 'MYADML', 'SLITRK1', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 0.9999999807346924 Coefficient of Determination: 1.0 RMSE: 3.1665789513353546e-15 NRMSE: 6.228518787048298e-16 MAPE: 1.543068252145602e-12 Pearson Correlation: 0.010844019549723265 Spearman Correlation: 0.07807329268444745 Coefficient of Determination: -2.6945073792858176 RMSE: 1.178196564417447 NRMSE: 0.3851700168091297 MAPE: 1125.8371604803115 Predictor: ElasticNet Pearson Correlation: 0.8957886847281182 Spearman Correlation: 0.8947538178830453 Coefficient of Determination: 0.7615890190100636 RMSE: 0.37557870288423373 NRMSE: 0.07387464651538823 MAPE: 136.5525925596509 Pearson Correlation: 0.0625878442380667 Spearman Correlation: 0.14242322223469123 Coefficient of Determination: -0.23192274988770567 RMSE: 0.6803481693481469 NRMSE: 0.22241595650336618 MAPE: 827.9910211886247 Predictor: RandomForests Pearson Correlation: 0.607194432048588 Spearman Correlation: 0.5963183033428682 Coefficient of Determination: 0.24953568153897454 RMSE: 0.66635069405492 NRMSE: 0.1310681931657986 MAPE: 334.7958998767034 Pearson Correlation: 0.03724568992909676 Spearman Correlation: 0.018905472636815922 Coefficient of Determination: -0.06457394119555171 RMSE: 0.6324517497858498 NRMSE: 0.2067579030977965 MAPE: 1111.1968978550617 Protein: CCNE1 x_train_column_count: 380 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'LINC00200', 'OR52B4', 'OR4F15', 'OR8J3', 'HTR5A', 'DAZL', 'RAB9BP1', 'SNORA32', 'C10ORF53', 'KRTAP19-8', 'IFNA16', 'OR2L2', 'TGIF2LX', 'F13B', 'FAM71A', 'OR11L1', 'OR9A2', 'OR8B3', 'TXLNGY', 'ZCCHC13', 'HBG1', 'OR2M3', 'GUCA2B', 'CLEC6A', 'NXF2B', 'OR10V1', 'OR10A5', 'SNORA51', 'OTX2', 'GRIN2B', 'TMPRSS11F', 'WFDC5', 'IL31', 'OR8S1', 'FGF23', 'OR5H14', 'HMHB1', 'PSG7', 'C18ORF42', 'LINC00895', 'MS4A6E', 'PPY', 'GOLGA6D', 'SCGB1C1', 'NOX3', 'KRTAP10-12', 'OR1N1', 'ASB17', 'ADAM18', 'ITLN2', 'RPL13AP17', 'OR1S2', 'KRTAP10-11', 'VWC2L', 'OR2G2', 'OR8G5', 'TAAR9', 'BRDTP1', 'PLG', 'SSX5', 'LEUTX', 'OR4D9', 'PWAR4', 'CRYAA', 'MAGEA10', 'TTTY14', 'TPD52L3', 'HIST1H4F', 'LINC01205', 'GDNF', 'SNORA34', 'CAPZA3', 'POTED', 'GPR52', 'MMP23A', 'LINC00636', 'ARSF', 'TCP10L2', 'SNORD89', 'XAGE5', 'C2ORF83', 'KRTAP12-2', 'COL6A4P1', 'TSGA13', 'LOC391343', 'ALOX12B', 'BTNL3', 'LOC391003', 'CYP11B2', 'CFHR4', 'SNORA70B', 'SFTA3', 'FAM27B', 'FMR1NB', 'HBD', 'RSPH6A', 'OR5T2', 'ANKUB1', 'OR4S1', 'BPIFA3', 'TRIM51', 'CYP2W1', 'OR9G4', 'CASC8', 'OPN1MW', 'SLC38A8', 'SSX8', 'ACTR3BP2', 'PROKR1', 'FOXN3-AS2', 'ARR3', 'OR56A1', 'ACTRT2', 'INSM2', 'P2RX3', 'ARHGAP36', 'HNRNPCL1', 'TBC1D28', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.9506042964924557 Spearman Correlation: 0.8369049767817409 Coefficient of Determination: 0.903648528509917 RMSE: 0.16216287989193945 NRMSE: 0.039134802203812886 MAPE: 30.66098126173889 Pearson Correlation: 0.04014547659846672 Spearman Correlation: 0.33467499594758043 Coefficient of Determination: -452480.27872921235 RMSE: 245.44864634701287 NRMSE: 106.91669048526065 MAPE: 2886.5587340728953 Predictor: ElasticNet Pearson Correlation: 0.8825331577543224 Spearman Correlation: 0.7428459678781444 Coefficient of Determination: 0.7653326612309621 RMSE: 0.2530746219842675 NRMSE: 0.06107455220799467 MAPE: 61.65825775088669 Pearson Correlation: 0.6428434414627986 Spearman Correlation: 0.5437449344754923 Coefficient of Determination: 0.40612699401029206 RMSE: 0.2811946971383004 NRMSE: 0.12248756245951144 MAPE: 94.6368988925641 Predictor: RandomForests Pearson Correlation: 0.8633610980603431 Spearman Correlation: 0.7272684119539691 Coefficient of Determination: 0.742184369182501 RMSE: 0.2652631330213 NRMSE: 0.0640160081621015 MAPE: 55.768678567224825 Pearson Correlation: 0.7730644965426068 Spearman Correlation: 0.6681455802541714 Coefficient of Determination: 0.5390810488935164 RMSE: 0.24772658523446808 NRMSE: 0.10790895379817401 MAPE: 79.73369783711594 Protein: CCND1 x_train_column_count: 877 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'LINC00200', 'OR52B4', 'OR4F15', 'OR8J3', 'HTR5A', 'DAZL', 'RAB9BP1', 'SNORA32', 'C10ORF53', 'KRTAP19-8', 'IFNA16', 'OR2L2', 'TGIF2LX', 'F13B', 'FAM71A', 'OR11L1', 'OR9A2', 'OR8B3', 'TXLNGY', 'ZCCHC13', 'HBG1', 'OR2M3', 'GUCA2B', 'CLEC6A', 'NXF2B', 'OR10V1', 'OR10A5', 'SNORA51', 'OTX2', 'GRIN2B', 'TMPRSS11F', 'WFDC5', 'IL31', 'OR8S1', 'FGF23', 'OR5H14', 'HMHB1', 'PSG7', 'C18ORF42', 'LINC00895', 'MS4A6E', 'PPY', 'GOLGA6D', 'SCGB1C1', 'NOX3', 'KRTAP10-12', 'OR1N1', 'ASB17', 'ADAM18', 'ITLN2', 'RPL13AP17', 'OR1S2', 'KRTAP10-11', 'VWC2L', 'OR2G2', 'OR8G5', 'TAAR9', 'BRDTP1', 'PLG', 'SSX5', 'LEUTX', 'OR4D9', 'PWAR4', 'CRYAA', 'MAGEA10', 'TTTY14', 'TPD52L3', 'HIST1H4F', 'LINC01205', 'GDNF', 'SNORA34', 'CAPZA3', 'POTED', 'GPR52', 'MMP23A', 'LINC00636', 'ARSF', 'TCP10L2', 'SNORD89', 'XAGE5', 'C2ORF83', 'KRTAP12-2', 'COL6A4P1', 'TSGA13', 'LOC391343', 'ALOX12B', 'BTNL3', 'LOC391003', 'CYP11B2', 'CFHR4', 'SNORA70B', 'SFTA3', 'FAM27B', 'FMR1NB', 'HBD', 'RSPH6A', 'OR5T2', 'ANKUB1', 'OR4S1', 'BPIFA3', 'TRIM51', 'CYP2W1', 'OR9G4', 'CASC8', 'OPN1MW', 'SLC38A8', 'SSX8', 'ACTR3BP2', 'PROKR1', 'FOXN3-AS2', 'ARR3', 'OR56A1', 'ACTRT2', 'INSM2', 'P2RX3', 'ARHGAP36', 'HNRNPCL1', 'TBC1D28', 'DMRT1', 'SDR16C6P', 'LINC00469', 'TAS2R60', 'STATH', 'KHDC1L', 'LINC00111', 'SLC13A1', 'ANKRD18DP', 'PF4', 'POTEH', 'C11ORF94', 'RESP18', 'EDDM3A', 'RTP2', 'DAOA', 'ASB18', 'C20ORF173', 'TKTL2', 'ADGRG7', 'OR4C16', 'DEFB126', 'DEFB129', 'GAGE1', 'OR4F5', 'ZIM3', 'IFITM5', 'OR6Y1', 'OR7A17', 'LINC00114', 'SPACA7', 'DUXA', 'OR6B3', 'DEFB104A', 'LHX9', 'SOX3', 'YWHAEP7', 'OR8H2', 'LGI3', 'FAM169B', 'PRAMEF20', 'CTRB1', 'LINC01566', 'KRTAP19-2', 'RGS8', 'MYBPHL', 'KRTAP6-1', 'KRTAP25-1', 'TRPV5', 'LINC00523', 'WFDC8', 'TCP10', 'GAGE2D', 'KCNQ1DN', 'TAS2R13', 'CPLX4', 'OR52H1', 'CLRN2', 'TMEM72', 'HSFY2', 'OR2T35', 'SFTPC', 'OR4K17', 'KRTAP13-1', 'SPANXA2', 'CCKAR', 'MYF5', 'TMEM202', 'GABRG3', 'AVPR1B', 'OR4K2', 'FCAMR', 'ASAP1-IT1', 'INS', 'CGB5', 'MMD2', 'CNTNAP4', 'LCNL1', 'FDCSP', 'KLK9', 'OLFM3', 'GH1', 'MAGEB6', 'CCDC166', 'LINC01101', 'SPDYC', 'MBD3L5', 'CRNN', 'LINC00113', 'CRLF2', 'NEU2', 'BEND2', 'HPD', 'OR8G2', 'OR14I1', 'SVOP', 'FAM71C', 'OLIG1', 'YIPF7', 'TPTE', 'IQCJ', 'OTOL1', 'IZUMO1R', 'LIPN', 'PRDM14', 'CYLC2', 'OR10H2', 'FAM27L', 'LRRTM1', 'OLAH', 'PRKAG3', 'HOXC12', 'PSG11', 'LOC285847', 'TARM1', 'DNTT', 'XAGE3', 'ALPPL2', 'FTMT', 'TCEB3C', 'FRMPD4', 'RHAG', 'SNORD115-26', 'GUCY2EP', 'KRTAP10-7', 'NANOS2', 'KRTAP10-1', 'SCN1A', 'KRT85', 'DEFB110', 'DAW1', 'OR4D6', 'LPO', 'BARHL2', 'OPRD1', 'DISC2', 'OR5H6', 'ABRA', 'OR5M10', 'IL17F', 'UGT2A3', 'C9ORF135', 'XKR7', 'PYDC2', 'UCMA', 'NKX1-2', 'LOC646813', 'OR1L1', 'TFF2', 'F11', 'OR6B2', 'SNORA59B', 'LCE1D', 'C20ORF166-AS1', 'PISRT1', 'TTTY15', 'C1ORF146', 'LCN9', 'TBC1D3P2', 'SNORA16B', 'FBXW12', 'MYBPC2', 'TMEM207', 'EPS8L3', 'SPATA19', 'SLC2A2', 'TTTY9B', 'TTTY8', 'ANXA8L1', 'SBSN', 'ADAM29', 'REG4', 'CHIAP2', 'ANP32D', 'GRK1', 'SPACA3', 'IGLL3P', 'CXADRP2', 'CETN1', 'IL26', 'CGB8', 'OR2M7', 'HBG2', 'FRMPD2B', 'CPLX3', 'OR4C12', 'ZNF679', 'SULT1C3', 'IVL', 'GUCY2F', 'GAGE2B', 'KRTAP21-1', 'SNORD94', 'PCGEM1', 'LMNTD1', 'MAGEA1', 'UGT1A5', 'DEFB134', 'CALR3', 'PSKH2', 'SNCB', 'FKBP6', 'PRAMEF1', 'MOGAT3', 'CYP7A1', 'POM121L2', 'CNGB1', 'GBX2', 'OR1E2', 'OR51I2', 'NYX', 'HAO1', 'LYZL1', 'OR51G2', 'NKX2-1', 'OR52E8', 'ZNF705A', 'OR5M8', 'LOC729609', 'OR6K6', 'GOLGA6L1', 'LINC00032', 'SATB2-AS1', 'ALX4', 'CCL24', 'FAM74A3', 'LINC00923', 'KCNK4', 'SNORA1', 'SNAR-F', 'SNORA84', 'TMEM88B', 'HTR3E', 'SLITRK3', 'SYCN', 'SLC25A31', 'KRTAP19-6', 'LINC00608', 'IFNA13', 'TSKS', 'SRY', 'TRHR', 'RPL3L', 'MAP3K15', 'BMP15', 'CRYGB', 'KGFLP1', 'ALLC', 'C10ORF120', 'DMRTB1', 'KRTAP2-1', 'NTS', 'INSC', 'DPPA2', 'RAX2', 'MUSK', 'CLRN1-AS1', 'TRIML1', 'TFAMP1', 'DKFZP434K028', 'FFAR1', 'KCNIP4-IT1', 'PROKR2', 'SLC6A5', 'NLRP13', 'POU6F2', 'FAM138D', 'LOC286238', 'OACYLP', 'CT47B1', 'OR1K1', 'GDPD2', 'DEFB123', 'ADGRD2', 'ANGPTL3', 'OR51F2', 'NKX2-3', 'KCNMB2', 'SLC36A3', 'CD200R1L', 'LCN1', 'MGC27382', 'MUC2', 'SPRR2E', 'LINC00520', 'MAGEA9B', 'GAGE12F', 'FOXD4L3', 'KIR3DL3', 'PTX4', 'AKR1C8P', 'CDRT15', 'GCSAML-AS1', 'LINC00575', 'IFNA7', 'LINC00479', 'HGC6.3', 'OR6A2', 'SLC10A1', 'CTRC', 'LINC00202-2', 'OR13C3', 'LINC01565', 'KRT25', 'ARL13A', 'KRTAP19-3', 'PAPOLB', 'MTVR2', 'SLC9C1', 'ADGRG4', 'IL36RN', 'LRRC30', 'KRTAP9-2', 'USP26', 'C12ORF50', 'KRT71', 'TRIM48', 'LHCGR', 'FAM71B', 'USP17L6P', 'BPIFB4', 'C6ORF10', 'OR7D4', 'LINC00303', 'USH1C', 'OCSTAMP', 'EDDM3B', 'CSN3', 'DAZ1', 'KRTAP10-6', 'OR2M4', 'DMRTC1', 'MAGEA6', 'ODF3', 'TNP1', 'AMER3', 'HULC', 'OR10W1', 'OR12D2', 'FOXR1', 'OR7G3', 'SLC17A6', 'PRB4', 'LINC01312', 'RPS4Y2', 'LINC00410', 'GUCA1C', 'KRTAP1-1', 'NKAIN3', 'NEUROD1', 'AQP2', 'XIRP2', 'CER1', 'SPOCK3', 'ACSM4', 'FAM170B', 'SPZ1', 'OR5M3', 'GKN2', 'KRTAP4-3', 'KRTAP1-5', 'FAM224B', 'ACSM2B', 'CRYGC', 'BTF3P11', 'OVCH1', 'BCYRN1', 'POTEG', 'BTN1A1', 'OR51B5', 'CHRNB3', 'GNAT3', 'FAM205A', 'LOC647859', 'HTR1A', 'PTH2', 'CALCB', 'SLC5A8', 'SLC5A7', 'OR1L4', 'LINC00304', 'TDH', 'HBE1', 'DMP1', 'MAGEB3', 'CNTN5', 'FAM19A1', 'OR2T10', 'FAM19A4', 'OR2AG1', 'FBXO47', 'HCRTR1', 'SHH', 'KCNG4', 'PRAC1', 'OR51M1', 'NLRP8', 'SHD', 'BPIFB3', 'SPANXN3', 'AHSG', 'OR13H1', 'SSX9', 'SERPINB12', 'LOC284798', 'LINC00671', 'NUTM1', 'KRT83', 'RFX6', 'SCTR', 'NCAN', 'LINC01142', 'OR7G2', 'AATK-AS1', 'H3F3AP5', 'SLC22A10', 'KRTAP11-1', 'FAM138B', 'C2ORF27B', 'GPHA2', 'DSCR10', 'CRISP2', 'UROC1', 'PPP1R2P9', 'DCT', 'PRL', 'POU4F2', 'HTR2C', 'NYAP2', 'SNORA76C', 'AVP', 'OR2G6', 'PTCHD3', 'AADACL3', 'TMEM14E', 'CLEC4G', 'HIST1H3A', 'PCP4', 'PPY2P', 'UGT1A4', 'GPR22', 'OR5H2', 'AIRE', 'KLRC4', 'OR2L8', 'AKR1D1', 'KCNJ16', 'TRIM75P', 'TRIM55', 'ARL14', 'CPA2', 'NF1P2', 'ISL1', 'ASB15', 'SPATA22', 'SPATA3', 'SSTR3', 'HIST2H2AB', 'OR2A14', 'LINC00207', 'IFNW1', 'SPATA45', 'CNGA2', 'POU4F3', 'SLC22A13', 'C16ORF90', 'GFI1B', 'APCS', 'C6ORF118', 'LOC145845', 'SNORA71B', 'SNORA62', 'PPAN-P2RY11', 'PCDH8', 'SNORA80E', 'FOXE3', 'NXPE1', 'UGT2B10', 'DEFB131', 'CACNG7', 'PRO0611', 'DEFB118', 'PCSK2', 'USP50', 'FAM170A', 'GNAS-AS1', 'LOC392196', 'ZFY', 'LOC400794', 'C1ORF140', 'CT47A6', 'MYH16', 'MIR1-1HG', 'C1ORF94', 'CGB2', 'CT47A7', 'MYL2', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.25399686293137e-15 NRMSE: 7.538666499930085e-16 MAPE: 3.84203789836982e-12 Pearson Correlation: 0.07412175132152257 Spearman Correlation: 0.05330989164453422 Coefficient of Determination: -3.764683748351649 RMSE: 0.4578228409532724 NRMSE: 0.4338196023549718 MAPE: 1401.939556687805 Predictor: ElasticNet Pearson Correlation: 0.7179706693340736 Spearman Correlation: 0.7000839601349166 Coefficient of Determination: 0.45422067836052027 RMSE: 0.1807444846314524 NRMSE: 0.10865835725881161 MAPE: 348.24753935588296 Pearson Correlation: 0.27912474776184476 Spearman Correlation: 0.2220351874711655 Coefficient of Determination: 0.06857140372358128 RMSE: 0.20242082922711255 NRMSE: 0.19180808773285374 MAPE: 259.8160045743752 Predictor: RandomForests Pearson Correlation: 0.5587964687286338 Spearman Correlation: 0.5363703857012737 Coefficient of Determination: 0.27139216503117314 RMSE: 0.2088350707263052 NRMSE: 0.12554560527485856 MAPE: 503.36086342085594 Pearson Correlation: 0.38339306296775555 Spearman Correlation: 0.38402723225975394 Coefficient of Determination: 0.1331450354185666 RMSE: 0.19527814294428136 NRMSE: 0.1850398860491802 MAPE: 299.77884592002744 Protein: ERBB2 x_train_column_count: 687 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'LINC00200', 'OR52B4', 'OR4F15', 'OR8J3', 'HTR5A', 'DAZL', 'RAB9BP1', 'SNORA32', 'C10ORF53', 'KRTAP19-8', 'IFNA16', 'OR2L2', 'TGIF2LX', 'F13B', 'FAM71A', 'OR11L1', 'OR9A2', 'OR8B3', 'TXLNGY', 'ZCCHC13', 'HBG1', 'OR2M3', 'GUCA2B', 'CLEC6A', 'NXF2B', 'OR10V1', 'OR10A5', 'SNORA51', 'OTX2', 'GRIN2B', 'TMPRSS11F', 'WFDC5', 'IL31', 'OR8S1', 'FGF23', 'OR5H14', 'HMHB1', 'PSG7', 'C18ORF42', 'LINC00895', 'MS4A6E', 'PPY', 'GOLGA6D', 'SCGB1C1', 'NOX3', 'KRTAP10-12', 'OR1N1', 'ASB17', 'ADAM18', 'ITLN2', 'RPL13AP17', 'OR1S2', 'KRTAP10-11', 'VWC2L', 'OR2G2', 'OR8G5', 'TAAR9', 'BRDTP1', 'PLG', 'SSX5', 'LEUTX', 'OR4D9', 'PWAR4', 'CRYAA', 'MAGEA10', 'TTTY14', 'TPD52L3', 'HIST1H4F', 'LINC01205', 'GDNF', 'SNORA34', 'CAPZA3', 'POTED', 'GPR52', 'MMP23A', 'LINC00636', 'ARSF', 'TCP10L2', 'SNORD89', 'XAGE5', 'C2ORF83', 'KRTAP12-2', 'COL6A4P1', 'TSGA13', 'LOC391343', 'ALOX12B', 'BTNL3', 'LOC391003', 'CYP11B2', 'CFHR4', 'SNORA70B', 'SFTA3', 'FAM27B', 'FMR1NB', 'HBD', 'RSPH6A', 'OR5T2', 'ANKUB1', 'OR4S1', 'BPIFA3', 'TRIM51', 'CYP2W1', 'OR9G4', 'CASC8', 'OPN1MW', 'SLC38A8', 'SSX8', 'ACTR3BP2', 'PROKR1', 'FOXN3-AS2', 'ARR3', 'OR56A1', 'ACTRT2', 'INSM2', 'P2RX3', 'ARHGAP36', 'HNRNPCL1', 'TBC1D28', 'DMRT1', 'SDR16C6P', 'LINC00469', 'TAS2R60', 'STATH', 'KHDC1L', 'LINC00111', 'SLC13A1', 'ANKRD18DP', 'PF4', 'POTEH', 'C11ORF94', 'RESP18', 'EDDM3A', 'RTP2', 'DAOA', 'ASB18', 'C20ORF173', 'TKTL2', 'ADGRG7', 'OR4C16', 'DEFB126', 'DEFB129', 'GAGE1', 'OR4F5', 'ZIM3', 'IFITM5', 'OR6Y1', 'OR7A17', 'LINC00114', 'SPACA7', 'DUXA', 'OR6B3', 'DEFB104A', 'LHX9', 'SOX3', 'YWHAEP7', 'OR8H2', 'LGI3', 'FAM169B', 'PRAMEF20', 'CTRB1', 'LINC01566', 'KRTAP19-2', 'RGS8', 'MYBPHL', 'KRTAP6-1', 'KRTAP25-1', 'TRPV5', 'LINC00523', 'WFDC8', 'TCP10', 'GAGE2D', 'KCNQ1DN', 'TAS2R13', 'CPLX4', 'OR52H1', 'CLRN2', 'TMEM72', 'HSFY2', 'OR2T35', 'SFTPC', 'OR4K17', 'KRTAP13-1', 'SPANXA2', 'CCKAR', 'MYF5', 'TMEM202', 'GABRG3', 'AVPR1B', 'OR4K2', 'FCAMR', 'ASAP1-IT1', 'INS', 'CGB5', 'MMD2', 'CNTNAP4', 'LCNL1', 'FDCSP', 'KLK9', 'OLFM3', 'GH1', 'MAGEB6', 'CCDC166', 'LINC01101', 'SPDYC', 'MBD3L5', 'CRNN', 'LINC00113', 'CRLF2', 'NEU2', 'BEND2', 'HPD', 'OR8G2', 'OR14I1', 'SVOP', 'FAM71C', 'OLIG1', 'YIPF7', 'TPTE', 'IQCJ', 'OTOL1', 'IZUMO1R', 'LIPN', 'PRDM14', 'CYLC2', 'OR10H2', 'FAM27L', 'LRRTM1', 'OLAH', 'PRKAG3', 'HOXC12', 'PSG11', 'LOC285847', 'TARM1', 'DNTT', 'XAGE3', 'ALPPL2', 'FTMT', 'TCEB3C', 'FRMPD4', 'RHAG', 'SNORD115-26', 'GUCY2EP', 'KRTAP10-7', 'NANOS2', 'KRTAP10-1', 'SCN1A', 'KRT85', 'DEFB110', 'DAW1', 'OR4D6', 'LPO', 'BARHL2', 'OPRD1', 'DISC2', 'OR5H6', 'ABRA', 'OR5M10', 'IL17F', 'UGT2A3', 'C9ORF135', 'XKR7', 'PYDC2', 'UCMA', 'NKX1-2', 'LOC646813', 'OR1L1', 'TFF2', 'F11', 'OR6B2', 'SNORA59B', 'LCE1D', 'C20ORF166-AS1', 'PISRT1', 'TTTY15', 'C1ORF146', 'LCN9', 'TBC1D3P2', 'SNORA16B', 'FBXW12', 'MYBPC2', 'TMEM207', 'EPS8L3', 'SPATA19', 'SLC2A2', 'TTTY9B', 'TTTY8', 'ANXA8L1', 'SBSN', 'ADAM29', 'REG4', 'CHIAP2', 'ANP32D', 'GRK1', 'SPACA3', 'IGLL3P', 'CXADRP2', 'CETN1', 'IL26', 'CGB8', 'OR2M7', 'HBG2', 'FRMPD2B', 'CPLX3', 'OR4C12', 'ZNF679', 'SULT1C3', 'IVL', 'GUCY2F', 'GAGE2B', 'KRTAP21-1', 'SNORD94', 'PCGEM1', 'LMNTD1', 'MAGEA1', 'UGT1A5', 'DEFB134', 'CALR3', 'PSKH2', 'SNCB', 'FKBP6', 'PRAMEF1', 'MOGAT3', 'CYP7A1', 'POM121L2', 'CNGB1', 'GBX2', 'OR1E2', 'OR51I2', 'NYX', 'HAO1', 'LYZL1', 'OR51G2', 'NKX2-1', 'OR52E8', 'ZNF705A', 'OR5M8', 'LOC729609', 'OR6K6', 'GOLGA6L1', 'LINC00032', 'SATB2-AS1', 'ALX4', 'CCL24', 'FAM74A3', 'LINC00923', 'KCNK4', 'SNORA1', 'SNAR-F', 'SNORA84', 'TMEM88B', 'HTR3E', 'SLITRK3', 'SYCN', 'SLC25A31', 'KRTAP19-6', 'LINC00608', 'IFNA13', 'TSKS', 'SRY', 'TRHR', 'RPL3L', 'MAP3K15', 'BMP15', 'CRYGB', 'KGFLP1', 'ALLC', 'C10ORF120', 'DMRTB1', 'KRTAP2-1', 'NTS', 'INSC', 'DPPA2', 'RAX2', 'MUSK', 'CLRN1-AS1', 'TRIML1', 'TFAMP1', 'DKFZP434K028', 'FFAR1', 'KCNIP4-IT1', 'PROKR2', 'SLC6A5', 'NLRP13', 'POU6F2', 'FAM138D', 'LOC286238', 'OACYLP', 'CT47B1', 'OR1K1', 'GDPD2', 'DEFB123', 'ADGRD2', 'ANGPTL3', 'OR51F2', 'NKX2-3', 'KCNMB2', 'SLC36A3', 'CD200R1L', 'LCN1', 'MGC27382', 'MUC2', 'SPRR2E', 'LINC00520', 'MAGEA9B', 'GAGE12F', 'FOXD4L3', 'KIR3DL3', 'PTX4', 'AKR1C8P', 'CDRT15', 'GCSAML-AS1', 'LINC00575', 'IFNA7', 'LINC00479', 'HGC6.3', 'OR6A2', 'SLC10A1', 'CTRC', 'LINC00202-2', 'OR13C3', 'LINC01565', 'KRT25', 'ARL13A', 'KRTAP19-3', 'PAPOLB', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 4.7928699173232555e-15 NRMSE: 8.165442726754784e-16 MAPE: 4.823155759193431e-12 Pearson Correlation: 0.4477116679568309 Spearman Correlation: 0.37201008991424067 Coefficient of Determination: -1.4900552850949946 RMSE: 1.6829922183831356 NRMSE: 0.3035919291404747 MAPE: 939.4136607503577 Predictor: ElasticNet Pearson Correlation: 0.9342891004642445 Spearman Correlation: 0.8772661588537117 Coefficient of Determination: 0.8571746216181457 RMSE: 0.37083074242601327 NRMSE: 0.06317712019796809 MAPE: 468.75413106657504 Pearson Correlation: 0.7862563961761218 Spearman Correlation: 0.5590625307832757 Coefficient of Determination: 0.6164273830636793 RMSE: 0.6605434811877926 NRMSE: 0.11915424655238341 MAPE: 217.29806190564483 Predictor: RandomForests Pearson Correlation: 0.8368023469187987 Spearman Correlation: 0.6432675141295189 Coefficient of Determination: 0.693848411347717 RMSE: 0.5429268222584062 NRMSE: 0.09249651979801458 MAPE: 536.463432395008 Pearson Correlation: 0.8620790220905912 Spearman Correlation: 0.6981126094030845 Coefficient of Determination: 0.7394682994250211 RMSE: 0.5443871938167051 NRMSE: 0.09820102348955645 MAPE: 200.7770358826022 Protein: ERBB3 x_train_column_count: 262 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.6903928974754523 Spearman Correlation: 0.6655740796210604 Coefficient of Determination: 0.4536381194487049 RMSE: 0.3333657373988952 NRMSE: 0.12087797372569961 MAPE: 203.9310743688987 Pearson Correlation: 0.36507514196802043 Spearman Correlation: 0.3531889425055176 Coefficient of Determination: -0.9126906849941958 RMSE: 0.6842004858390056 NRMSE: 0.19022742360158632 MAPE: 277.6383437776841 Predictor: ElasticNet Pearson Correlation: 0.6146281545288641 Spearman Correlation: 0.612632817929811 Coefficient of Determination: 0.3553175403285763 RMSE: 0.3621209853749542 NRMSE: 0.13130458845955545 MAPE: 181.0155420944635 Pearson Correlation: 0.3841180042747777 Spearman Correlation: 0.4034588959962095 Coefficient of Determination: 0.11917055347303795 RMSE: 0.46430880467832314 NRMSE: 0.12909120864066814 MAPE: 144.1259343537446 Predictor: RandomForests Pearson Correlation: 0.5299703409714386 Spearman Correlation: 0.5606832979608602 Coefficient of Determination: 0.27425526288165236 RMSE: 0.3842135826789409 NRMSE: 0.13931533490662754 MAPE: 243.46764449622333 Pearson Correlation: 0.4067949683666696 Spearman Correlation: 0.43597257590513516 Coefficient of Determination: 0.14199470638723555 RMSE: 0.45825371085287137 NRMSE: 0.12740771831594394 MAPE: 163.60143074765222 Fold: 4 Protein: RB1 x_train_column_count: 380 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'DEFB109P1', 'OR8J3', 'TXLNGY', 'OR52B4', 'IFNA16', 'LINC00111', 'SNORA20', 'RAB9BP1', 'DAZL', 'OR5AN1', 'OR2T34', 'F13B', 'KRTAP19-8', 'OR11L1', 'LGALS14', 'SST', 'HBG1', 'OR2M3', 'SNORD15A', 'OTX2', 'FAM183CP', 'CLEC6A', 'OR10V1', 'NXF2B', 'TMPRSS11F', 'GPR151', 'OR8S1', 'OR2M7', 'OR5H14', 'PRM3', 'MS4A6E', 'OR8G5', 'DNAJB8', 'OR2G2', 'FGF23', 'MBD3L5', 'SCGB1C1', 'OR8B3', 'OR10A5', 'WFDC5', 'TCP10L2', 'TMEM252', 'ACOT12', 'LOC145845', 'PRSS3P2', 'PPY', 'MAGEB10', 'LINC01205', 'TAAR9', 'TSGA13', 'PLA2G2F', 'PSAPL1', 'SUN3', 'PSG7', 'CRYAA', 'USP26', 'SPRR1B', 'TTTY14', 'KRTAP10-12', 'OR1S2', 'OR2AG1', 'PRAMEF8', 'HIST1H4F', 'NPPC', 'SNORD89', 'MC2R', 'C1ORF87', 'NOX3', 'C20ORF173', 'LEUTX', 'SFTA3', 'FOXN3-AS2', 'XAGE5', 'LOC391003', 'VWC2L', 'LINC00636', 'SDR16C6P', 'FAM169B', 'LOC391343', 'ACTRT2', 'RPL13AP17', 'SLC5A7', 'ALOX12B', 'CAPZA3', 'KRTAP19-1', 'OR4S1', 'BMP10', 'OR5B2', 'TTTY15', 'OPN1MW', 'RTP2', 'SLC38A8', 'C10ORF53', 'OR4D9', 'FMR1NB', 'P2RX3', 'ARHGAP36', 'ARR3', 'CCKBR', 'SNORA70B', 'STATH', 'CASC8', 'TBC1D28', 'C11ORF94', 'KRT39', 'OR1N1', 'C1ORF94', 'SNORA34', 'TAS2R60', 'ACTR3BP2', 'SSX8', 'HNRNPCL1', 'IFITM5', 'ANKRD18DP', 'PF4', 'BEND2', 'GAGE1', 'PROKR1', 'EDDM3A', 'CABS1', 'BPIFA3', 'KHDC1L', 'LINC00029', 'MMP23A', 'DEFB129', 'OR4C16', 'AKAP14', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.7948212463825206 Spearman Correlation: 0.7385210747822216 Coefficient of Determination: 0.6313634072787018 RMSE: 0.15270593857693868 NRMSE: 0.05584623265686757 MAPE: 701.4685938742297 Pearson Correlation: 0.09744470793523596 Spearman Correlation: 0.0023616254566765174 Coefficient of Determination: -6.180819027975259e+26 RMSE: 4099181804304.693 NRMSE: 3927472697950.3057 MAPE: 158186560539828.4 Predictor: ElasticNet Pearson Correlation: 0.549636417905403 Spearman Correlation: 0.4435581418673299 Coefficient of Determination: 0.25548088364574895 RMSE: 0.21701743775703264 NRMSE: 0.07936565160804294 MAPE: 303.4215565298054 Pearson Correlation: 0.25444331536408993 Spearman Correlation: 0.2827042731206125 Coefficient of Determination: 0.008328271063699821 RMSE: 0.16419432118524044 NRMSE: 0.15731644615916188 MAPE: 112.25851575916363 Predictor: RandomForests Pearson Correlation: 0.5617739264944551 Spearman Correlation: 0.42247727368749793 Coefficient of Determination: 0.169391436139408 RMSE: 0.22922126623458292 NRMSE: 0.08382872521744548 MAPE: 139.57757966827057 Pearson Correlation: 0.16082302622451827 Spearman Correlation: 0.20889533031800062 Coefficient of Determination: -0.04082953315843407 RMSE: 0.16821470943082512 NRMSE: 0.16116842585255156 MAPE: 94.62457313035952 Protein: CDH1 x_train_column_count: 885 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'DEFB109P1', 'OR8J3', 'TXLNGY', 'OR52B4', 'IFNA16', 'LINC00111', 'SNORA20', 'RAB9BP1', 'DAZL', 'OR5AN1', 'OR2T34', 'F13B', 'KRTAP19-8', 'OR11L1', 'LGALS14', 'SST', 'HBG1', 'OR2M3', 'SNORD15A', 'OTX2', 'FAM183CP', 'CLEC6A', 'OR10V1', 'NXF2B', 'TMPRSS11F', 'GPR151', 'OR8S1', 'OR2M7', 'OR5H14', 'PRM3', 'MS4A6E', 'OR8G5', 'DNAJB8', 'OR2G2', 'FGF23', 'MBD3L5', 'SCGB1C1', 'OR8B3', 'OR10A5', 'WFDC5', 'TCP10L2', 'TMEM252', 'ACOT12', 'LOC145845', 'PRSS3P2', 'PPY', 'MAGEB10', 'LINC01205', 'TAAR9', 'TSGA13', 'PLA2G2F', 'PSAPL1', 'SUN3', 'PSG7', 'CRYAA', 'USP26', 'SPRR1B', 'TTTY14', 'KRTAP10-12', 'OR1S2', 'OR2AG1', 'PRAMEF8', 'HIST1H4F', 'NPPC', 'SNORD89', 'MC2R', 'C1ORF87', 'NOX3', 'C20ORF173', 'LEUTX', 'SFTA3', 'FOXN3-AS2', 'XAGE5', 'LOC391003', 'VWC2L', 'LINC00636', 'SDR16C6P', 'FAM169B', 'LOC391343', 'ACTRT2', 'RPL13AP17', 'SLC5A7', 'ALOX12B', 'CAPZA3', 'KRTAP19-1', 'OR4S1', 'BMP10', 'OR5B2', 'TTTY15', 'OPN1MW', 'RTP2', 'SLC38A8', 'C10ORF53', 'OR4D9', 'FMR1NB', 'P2RX3', 'ARHGAP36', 'ARR3', 'CCKBR', 'SNORA70B', 'STATH', 'CASC8', 'TBC1D28', 'C11ORF94', 'KRT39', 'OR1N1', 'C1ORF94', 'SNORA34', 'TAS2R60', 'ACTR3BP2', 'SSX8', 'HNRNPCL1', 'IFITM5', 'ANKRD18DP', 'PF4', 'BEND2', 'GAGE1', 'PROKR1', 'EDDM3A', 'CABS1', 'BPIFA3', 'KHDC1L', 'LINC00029', 'MMP23A', 'DEFB129', 'OR4C16', 'AKAP14', 'CYP11B2', 'HBD', 'OR10S1', 'LINC00114', 'PRSS1', 'DEFB104A', 'HSFY2', 'CABP5', 'CYP2W1', 'CYP3A4', 'SFTPC', 'CGB5', 'CCL15-CCL14', 'DMRT1', 'RGS8', 'PROP1', 'TKTL2', 'SERPINB4', 'CLRN2', 'KCNQ1DN', 'PRAP1', 'LINC00469', 'YWHAEP7', 'SNORA51', 'KRTAP25-1', 'DUXA', 'SNORA32', 'OR4F5', 'XKR7', 'OTP', 'SNORA54', 'SLC13A1', 'LHX9', 'SVOP', 'LGI3', 'KRTAP6-1', 'PAGE2', 'LOC646813', 'MYBPHL', 'OR6Y1', 'OR4K17', 'KRTAP19-2', 'TAS2R13', 'GAGE2D', 'OR7A17', 'OR2T35', 'FBP2', 'SPACA7', 'KRTAP19-3', 'ANKUB1', 'LOC285627', 'PLET1', 'GABRG3', 'INS', 'AVPR1B', 'PRAMEF20', 'OR4K2', 'NEU2', 'MGC27382', 'FCAMR', 'TCP10', 'LCNL1', 'CRLF2', 'LINC01101', 'OTOL1', 'DNTT', 'FDCSP', 'KRT85', 'FAM71C', 'C3ORF49', 'ZFAT-AS1', 'FOXE1', 'OR6B3', 'LINC00113', 'HPD', 'C9ORF135', 'IFNA13', 'KRTAP4-5', 'OR10H2', 'IZUMO1R', 'OLIG1', 'OR1L3', 'OR8H2', 'PRDM14', 'FGF6', 'XAGE3', 'SCARNA20', 'DAW1', 'GH1', 'TCEB3C', 'CCDC166', 'TMEM207', 'UGT2A3', 'PTF1A', 'SPANXN1', 'FAM27L', 'OR14I1', 'OR8G2', 'OR1L1', 'OLAH', 'PSG11', 'DEFB108B', 'DEFA4', 'ALPPL2', 'CYLC2', 'PRKAG3', 'SNORA47', 'SPATA19', 'IL26', 'FGA', 'PRG1', 'OR51I2', 'CER1', 'LINC00923', 'BARHL2', 'KRTAP10-1', 'C17ORF78', 'SLC25A31', 'SULT1C3', 'IVL', 'NANOS2', 'LCN9', 'HBBP1', 'LCE1D', 'PYDC2', 'TFF2', 'NKX2-1', 'ZNF479', 'PISRT1', 'OR5H6', 'GYS2', 'GUCY2EP', 'FTMT', 'LINC00696', 'DEFB110', 'OPRD1', 'OR4D6', 'MYBPC2', 'EPS8L3', 'LPO', 'TARM1', 'OR7E24', 'SCGB1A1', 'UCMA', 'HOXC12', 'SCN1A', 'ENAM', 'FMO6P', 'OR1E2', 'GAGE2B', 'CPLX3', 'OR14C36', 'OR6B2', 'OR1B1', 'LOC729609', 'CLCA4', 'OR6M1', 'RESP18', 'MAGEA9B', 'ST8SIA3', 'OR1K1', 'TTTY9B', 'CYP7A1', 'GBX2', 'PRAMEF1', 'SCARNA11', 'SBSN', 'HBZ', 'HBG2', 'GPR78', 'OR4C12', 'SERPINI2', 'FRMPD2B', 'ZNF679', 'SNORA59B', 'TTTY8', 'HAO1', 'LINC00326', 'SPATA31A3', 'FAM27B', 'KRTAP21-1', 'SLC1A6', 'LINC00488', 'HTR3E', 'SLITRK3', 'OR4M2', 'MAGEB6', 'OR2M4', 'C12ORF50', 'KRTAP19-6', 'LYZL1', 'ADGRD2', 'YIPF7', 'GPRC6A', 'OR12D2', 'CCL24', 'SYCN', 'SNAR-F', 'CGB8', 'LINC00608', 'NYX', 'ANP32D', 'ASB10', 'LOC286238', 'ANGPTL3', 'TMEM88B', 'ALX4', 'ALLC', 'OR6F1', 'SNORD94', 'OC90', 'CD200R1L', 'SNORA38B', 'OR6C74', 'LMNTD1', 'OR51G2', 'GPR148', 'FAM71B', 'DPPA2', 'BRINP3', 'OR6A2', 'SLC51B', 'OR6K6', 'DYDC1', 'OR51F2', 'POU6F2', 'GDPD2', 'DKFZP434K028', 'ADGRG4', 'FFAR1', 'MAP3K15', 'KRT13', 'KRTAP2-1', 'CNBD1', 'SRY', 'NTS', 'LINC00575', 'RAX2', 'LINC00934', 'SERPINB3', 'BET1P1', 'C10ORF120', 'MOGAT3', 'SPACA3', 'IL17F', 'IL36RN', 'ARID3C', 'OR11H4', 'SLC6A5', 'CNTN5', 'TRHR', 'SNORA37', 'TSKS', 'SNORA16B', 'LOC284798', 'OR13C3', 'KCNK4', 'TCERG1L', 'GUCA2B', 'LINC00304', 'OR2A14', 'KRT25', 'KCNMB2', 'SLC2A2', 'MYH1', 'IFNA7', 'LINC00410', 'APOC3', 'TMEM179', 'HBE1', 'BMP15', 'OR2L8', 'SLC22A12', 'SNORA71A', 'KIR3DL3', 'GAGE12F', 'LINC01312', 'PRB4', 'MUSK', 'SPRR2E', 'FAM25BP', 'NLRP8', 'OR2A2', 'SPATA31C1', 'ITIH1', 'SEC14L3', 'NKAIN3', 'RPS4Y2', 'SNORA74A', 'LINC00710', 'LINC00928', 'SNORA76C', 'ZNF705A', 'DCT', 'OR2AT4', 'FAM170B', 'GPR22', 'TDRG1', 'SLC17A6', 'OR56B1', 'MAGEB3', 'PAPOLB', 'MAGEA1', 'TNP1', 'LOC100130264', 'OR11H6', 'HTR1A', 'SSX6', 'LRRC30', 'USH1C', 'CSN3', 'OR10W1', 'PROKR2', 'SPANXN3', 'USP9Y', 'CFHR2', 'SOX3', 'CTRC', 'GDNF', 'EDDM3B', 'KCNIP4-IT1', 'EPPIN', 'GKN2', 'PAGE5', 'MUC2', 'GCSAML-AS1', 'DMRTC1', 'BTN1A1', 'FAM205A', 'OR51B5', 'BCYRN1', 'DMP1', 'PPY2P', 'SCP2D1', 'ZCCHC13', 'SCARNA8', 'CHRNB3', 'LOC647859', 'HPVC1', 'SPOCK3', 'HMHB1', 'OCSTAMP', 'SPZ1', 'CRYGC', 'BPIFB3', 'ADAM29', 'ACER1', 'MAGEA12', 'PTH2', 'KRTAP4-3', 'ZFY', 'BPIFB4', 'LINC00479', 'ANKRD34C', 'GAGE2C', 'SLC32A1', 'NXPE1', 'CCKAR', 'KRTAP1-1', 'KRTAP1-5', 'TRIM48', 'ZAR1L', 'ASB15', 'FAM19A4', 'OR2T10', 'MS4A10', 'NUTM1', 'TMEM14E', 'VRTN', 'C4ORF51', 'KRT83', 'OR4F21', 'C6ORF10', 'KRT71', 'KRT3', 'C2ORF27B', 'KRTAP11-1', 'DAOA', 'KLRC4', 'HMSD', 'SOX1', 'LOC644669', 'AATK-AS1', 'ODF3', 'SPATA3', 'MMP20', 'CT47A1', 'ATOH7', 'AVP', 'AIRE', 'TPTE', 'CLEC4G', 'LINC01142', 'KCNU1', 'BTF3P11', 'FOXD4L3', 'MTVR2', 'OR2G6', 'PPP1R2P9', 'AADACL3', 'SSX9', 'RFX6', 'OR6S1', 'AFM', 'AKR1D1', 'LRRC52', 'C1ORF146', 'ZNF735', 'LOC400940', 'OACYLP', 'EPB42', 'TBR1', 'ASAP1-IT1', 'PCP4', 'B3GNT6', 'FAM170A', 'SLC22A10', 'GFI1B', 'MTNR1B', 'BTNL3', 'GNAS-AS1', 'MYH16', 'CPA2', 'LINC00303', 'IGLL1', 'HCRTR1', 'CNGA2', 'CA4', 'SH2D7', 'INSM2', 'CA6', 'CLCA1', 'HULC', 'CACNG7', 'PRR32', 'PRL', 'NF1P2', 'ZIM3', 'HYALP1', 'CT47A11', 'KRTAP3-2', 'CFHR4', 'TMEM132D', 'KCNJ16', 'USP50', 'TSPEAR-AS2', 'UGT1A4', 'PLA2G12B', 'TRIM55', 'NEUROG1', 'SSTR3', 'C11ORF87', 'SNORA72', 'DISC2', 'SERPINB11', 'NEUROD6', 'PRAMEF16', 'LINC01591', 'SNORA2B', 'PRSS48', 'GSC2', 'SNORA27', 'VWA5B1', 'OR51F1', 'OR10AD1', 'SCGB3A2', 'FERD3L', 'LINC00691', 'GABRR3', 'NKX6-2', 'RAPGEF4-AS1', 'ADRB3', 'GAGE12J', 'FAM47C', 'OR51L1', 'POM121L2', 'OR5H2', 'KRTAP12-1', 'C17ORF64', 'COX7B2', 'IFNW1', 'HIST1H3A', 'ANKRD20A20P', 'SLC10A1', 'LINC00032', 'GSTA5', 'KRTAP9-2', 'OR4D10', 'APCS', 'CGB2', 'OR5B17', 'AADAC', 'IFNL1', 'ZSCAN10', 'MMD2', 'FER1L6', 'UTS2R', 'OR51T1', 'LINC00452', 'MCF2', 'ART1', 'C12ORF56', 'OR52K2', 'MAGEA5', 'PATE3', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 5.346226950196883e-15 NRMSE: 8.51282912995905e-16 MAPE: 3.470265198312674e-12 Pearson Correlation: 0.16887063263060964 Spearman Correlation: 0.12528585144453175 Coefficient of Determination: -2.227951862943126 RMSE: 2.095697430754734 NRMSE: 0.380192560276248 MAPE: 902.1718448138315 Predictor: ElasticNet Pearson Correlation: 0.9145647338353758 Spearman Correlation: 0.8937310268034744 Coefficient of Determination: 0.8107416766105788 RMSE: 0.48681277645121873 NRMSE: 0.07751548938747471 MAPE: 244.21392151305707 Pearson Correlation: 0.4397501210267807 Spearman Correlation: 0.38131896906445223 Coefficient of Determination: 0.13379328810438018 RMSE: 1.0856149826722763 NRMSE: 0.19694767654879655 MAPE: 392.0037546884568 Predictor: RandomForests Pearson Correlation: 0.7447307174752974 Spearman Correlation: 0.6906461505909994 Coefficient of Determination: 0.5493926358416389 RMSE: 0.751162011248155 NRMSE: 0.11960797605938583 MAPE: 242.84357349447396 Pearson Correlation: 0.7609719704060809 Spearman Correlation: 0.4104640334912239 Coefficient of Determination: 0.5194468899943138 RMSE: 0.8086037521536624 NRMSE: 0.1466934712371943 MAPE: 138.0956579190937 Protein: CDH2 x_train_column_count: 485 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'DEFB109P1', 'OR8J3', 'TXLNGY', 'OR52B4', 'IFNA16', 'LINC00111', 'SNORA20', 'RAB9BP1', 'DAZL', 'OR5AN1', 'OR2T34', 'F13B', 'KRTAP19-8', 'OR11L1', 'LGALS14', 'SST', 'HBG1', 'OR2M3', 'SNORD15A', 'OTX2', 'FAM183CP', 'CLEC6A', 'OR10V1', 'NXF2B', 'TMPRSS11F', 'GPR151', 'OR8S1', 'OR2M7', 'OR5H14', 'PRM3', 'MS4A6E', 'OR8G5', 'DNAJB8', 'OR2G2', 'FGF23', 'MBD3L5', 'SCGB1C1', 'OR8B3', 'OR10A5', 'WFDC5', 'TCP10L2', 'TMEM252', 'ACOT12', 'LOC145845', 'PRSS3P2', 'PPY', 'MAGEB10', 'LINC01205', 'TAAR9', 'TSGA13', 'PLA2G2F', 'PSAPL1', 'SUN3', 'PSG7', 'CRYAA', 'USP26', 'SPRR1B', 'TTTY14', 'KRTAP10-12', 'OR1S2', 'OR2AG1', 'PRAMEF8', 'HIST1H4F', 'NPPC', 'SNORD89', 'MC2R', 'C1ORF87', 'NOX3', 'C20ORF173', 'LEUTX', 'SFTA3', 'FOXN3-AS2', 'XAGE5', 'LOC391003', 'VWC2L', 'LINC00636', 'SDR16C6P', 'FAM169B', 'LOC391343', 'ACTRT2', 'RPL13AP17', 'SLC5A7', 'ALOX12B', 'CAPZA3', 'KRTAP19-1', 'OR4S1', 'BMP10', 'OR5B2', 'TTTY15', 'OPN1MW', 'RTP2', 'SLC38A8', 'C10ORF53', 'OR4D9', 'FMR1NB', 'P2RX3', 'ARHGAP36', 'ARR3', 'CCKBR', 'SNORA70B', 'STATH', 'CASC8', 'TBC1D28', 'C11ORF94', 'KRT39', 'OR1N1', 'C1ORF94', 'SNORA34', 'TAS2R60', 'ACTR3BP2', 'SSX8', 'HNRNPCL1', 'IFITM5', 'ANKRD18DP', 'PF4', 'BEND2', 'GAGE1', 'PROKR1', 'EDDM3A', 'CABS1', 'BPIFA3', 'KHDC1L', 'LINC00029', 'MMP23A', 'DEFB129', 'OR4C16', 'AKAP14', 'CYP11B2', 'HBD', 'OR10S1', 'LINC00114', 'PRSS1', 'DEFB104A', 'HSFY2', 'CABP5', 'CYP2W1', 'CYP3A4', 'SFTPC', 'CGB5', 'CCL15-CCL14', 'DMRT1', 'RGS8', 'PROP1', 'TKTL2', 'SERPINB4', 'CLRN2', 'KCNQ1DN', 'PRAP1', 'LINC00469', 'YWHAEP7', 'SNORA51', 'KRTAP25-1', 'DUXA', 'SNORA32', 'OR4F5', 'XKR7', 'OTP', 'SNORA54', 'SLC13A1', 'LHX9', 'SVOP', 'LGI3', 'KRTAP6-1', 'PAGE2', 'LOC646813', 'MYBPHL', 'OR6Y1', 'OR4K17', 'KRTAP19-2', 'TAS2R13', 'GAGE2D', 'OR7A17', 'OR2T35', 'FBP2', 'SPACA7', 'KRTAP19-3', 'ANKUB1', 'LOC285627', 'PLET1', 'GABRG3', 'INS', 'AVPR1B', 'PRAMEF20', 'OR4K2', 'NEU2', 'MGC27382', 'FCAMR', 'TCP10', 'LCNL1', 'CRLF2', 'LINC01101', 'OTOL1', 'DNTT', 'FDCSP', 'KRT85', 'FAM71C', 'C3ORF49', 'ZFAT-AS1', 'FOXE1', 'OR6B3', 'LINC00113', 'HPD', 'C9ORF135', 'IFNA13', 'KRTAP4-5', 'OR10H2', 'IZUMO1R', 'OLIG1', 'OR1L3', 'OR8H2', 'PRDM14', 'FGF6', 'XAGE3', 'SCARNA20', 'DAW1', 'GH1', 'TCEB3C', 'CCDC166', 'TMEM207', 'UGT2A3', 'PTF1A', 'SPANXN1', 'FAM27L', 'OR14I1', 'OR8G2', 'OR1L1', 'OLAH', 'PSG11', 'DEFB108B', 'DEFA4', 'ALPPL2', 'CYLC2', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.9277958710352593 Spearman Correlation: 0.9081586713163659 Coefficient of Determination: 0.860367562569324 RMSE: 0.141758380590052 NRMSE: 0.05136545423220958 MAPE: 504.5748907883453 Pearson Correlation: 0.023045865780504337 Spearman Correlation: -0.08927542737440618 Coefficient of Determination: -7.988936925718366e+25 RMSE: 2978769167924.7803 NRMSE: 1536651999465.963 MAPE: 303887155662883.4 Predictor: ElasticNet Pearson Correlation: 0.7175004083170967 Spearman Correlation: 0.6706533654095614 Coefficient of Determination: 0.4519500698942466 RMSE: 0.28084432146615423 NRMSE: 0.10176256303578311 MAPE: 734.2118396429041 Pearson Correlation: 0.15517475242206477 Spearman Correlation: 0.10547513061260118 Coefficient of Determination: -0.008890129836808258 RMSE: 0.3347451477315342 NRMSE: 0.17268434429632193 MAPE: 183.02558774823302 Predictor: RandomForests Pearson Correlation: 0.49717142891566196 Spearman Correlation: 0.44704252007221246 Coefficient of Determination: 0.14267273620604326 RMSE: 0.35126016515245284 NRMSE: 0.1272773987797858 MAPE: 339.0862828489548 Pearson Correlation: 0.020656056004860084 Spearman Correlation: 0.09401898035819478 Coefficient of Determination: -0.03994579077910787 RMSE: 0.33985816213931774 NRMSE: 0.17532198533867654 MAPE: 127.39945963325259 Protein: CDH3 x_train_column_count: 75 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.43276192816482667 Spearman Correlation: 0.40484379149265626 Coefficient of Determination: 0.18726098470496266 RMSE: 0.18563213195218672 NRMSE: 0.13229765522484335 MAPE: 201.74319735663775 Pearson Correlation: 0.2888588063909453 Spearman Correlation: 0.3449594134590207 Coefficient of Determination: 0.00218849823550038 RMSE: 0.2075686888433383 NRMSE: 0.18474525948638967 MAPE: 449.2018047791869 Predictor: ElasticNet Pearson Correlation: 0.32934932240759757 Spearman Correlation: 0.3733415074748625 Coefficient of Determination: 0.09723088032647553 RMSE: 0.1956437352496859 NRMSE: 0.13943279733290043 MAPE: 154.10305580898194 Pearson Correlation: 0.4269839505580554 Spearman Correlation: 0.35420641155126625 Coefficient of Determination: 0.014417717442761324 RMSE: 0.20629278216397984 NRMSE: 0.1836096464424763 MAPE: 441.64364930304816 Predictor: RandomForests Pearson Correlation: 0.43827324138357854 Spearman Correlation: 0.45204391190675935 Coefficient of Determination: 0.17736902999295445 RMSE: 0.1867583920420393 NRMSE: 0.1331003264407253 MAPE: 300.69066356706446 Pearson Correlation: 0.3526330326270272 Spearman Correlation: 0.33777045165003217 Coefficient of Determination: 0.03172131042408621 RMSE: 0.2044738508019339 NRMSE: 0.18199071755516835 MAPE: 723.2262449960062 Protein: PTEN x_train_column_count: 929 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'DEFB109P1', 'OR8J3', 'TXLNGY', 'OR52B4', 'IFNA16', 'LINC00111', 'SNORA20', 'RAB9BP1', 'DAZL', 'OR5AN1', 'OR2T34', 'F13B', 'KRTAP19-8', 'OR11L1', 'LGALS14', 'SST', 'HBG1', 'OR2M3', 'SNORD15A', 'OTX2', 'FAM183CP', 'CLEC6A', 'OR10V1', 'NXF2B', 'TMPRSS11F', 'GPR151', 'OR8S1', 'OR2M7', 'OR5H14', 'PRM3', 'MS4A6E', 'OR8G5', 'DNAJB8', 'OR2G2', 'FGF23', 'MBD3L5', 'SCGB1C1', 'OR8B3', 'OR10A5', 'WFDC5', 'TCP10L2', 'TMEM252', 'ACOT12', 'LOC145845', 'PRSS3P2', 'PPY', 'MAGEB10', 'LINC01205', 'TAAR9', 'TSGA13', 'PLA2G2F', 'PSAPL1', 'SUN3', 'PSG7', 'CRYAA', 'USP26', 'SPRR1B', 'TTTY14', 'KRTAP10-12', 'OR1S2', 'OR2AG1', 'PRAMEF8', 'HIST1H4F', 'NPPC', 'SNORD89', 'MC2R', 'C1ORF87', 'NOX3', 'C20ORF173', 'LEUTX', 'SFTA3', 'FOXN3-AS2', 'XAGE5', 'LOC391003', 'VWC2L', 'LINC00636', 'SDR16C6P', 'FAM169B', 'LOC391343', 'ACTRT2', 'RPL13AP17', 'SLC5A7', 'ALOX12B', 'CAPZA3', 'KRTAP19-1', 'OR4S1', 'BMP10', 'OR5B2', 'TTTY15', 'OPN1MW', 'RTP2', 'SLC38A8', 'C10ORF53', 'OR4D9', 'FMR1NB', 'P2RX3', 'ARHGAP36', 'ARR3', 'CCKBR', 'SNORA70B', 'STATH', 'CASC8', 'TBC1D28', 'C11ORF94', 'KRT39', 'OR1N1', 'C1ORF94', 'SNORA34', 'TAS2R60', 'ACTR3BP2', 'SSX8', 'HNRNPCL1', 'IFITM5', 'ANKRD18DP', 'PF4', 'BEND2', 'GAGE1', 'PROKR1', 'EDDM3A', 'CABS1', 'BPIFA3', 'KHDC1L', 'LINC00029', 'MMP23A', 'DEFB129', 'OR4C16', 'AKAP14', 'CYP11B2', 'HBD', 'OR10S1', 'LINC00114', 'PRSS1', 'DEFB104A', 'HSFY2', 'CABP5', 'CYP2W1', 'CYP3A4', 'SFTPC', 'CGB5', 'CCL15-CCL14', 'DMRT1', 'RGS8', 'PROP1', 'TKTL2', 'SERPINB4', 'CLRN2', 'KCNQ1DN', 'PRAP1', 'LINC00469', 'YWHAEP7', 'SNORA51', 'KRTAP25-1', 'DUXA', 'SNORA32', 'OR4F5', 'XKR7', 'OTP', 'SNORA54', 'SLC13A1', 'LHX9', 'SVOP', 'LGI3', 'KRTAP6-1', 'PAGE2', 'LOC646813', 'MYBPHL', 'OR6Y1', 'OR4K17', 'KRTAP19-2', 'TAS2R13', 'GAGE2D', 'OR7A17', 'OR2T35', 'FBP2', 'SPACA7', 'KRTAP19-3', 'ANKUB1', 'LOC285627', 'PLET1', 'GABRG3', 'INS', 'AVPR1B', 'PRAMEF20', 'OR4K2', 'NEU2', 'MGC27382', 'FCAMR', 'TCP10', 'LCNL1', 'CRLF2', 'LINC01101', 'OTOL1', 'DNTT', 'FDCSP', 'KRT85', 'FAM71C', 'C3ORF49', 'ZFAT-AS1', 'FOXE1', 'OR6B3', 'LINC00113', 'HPD', 'C9ORF135', 'IFNA13', 'KRTAP4-5', 'OR10H2', 'IZUMO1R', 'OLIG1', 'OR1L3', 'OR8H2', 'PRDM14', 'FGF6', 'XAGE3', 'SCARNA20', 'DAW1', 'GH1', 'TCEB3C', 'CCDC166', 'TMEM207', 'UGT2A3', 'PTF1A', 'SPANXN1', 'FAM27L', 'OR14I1', 'OR8G2', 'OR1L1', 'OLAH', 'PSG11', 'DEFB108B', 'DEFA4', 'ALPPL2', 'CYLC2', 'PRKAG3', 'SNORA47', 'SPATA19', 'IL26', 'FGA', 'PRG1', 'OR51I2', 'CER1', 'LINC00923', 'BARHL2', 'KRTAP10-1', 'C17ORF78', 'SLC25A31', 'SULT1C3', 'IVL', 'NANOS2', 'LCN9', 'HBBP1', 'LCE1D', 'PYDC2', 'TFF2', 'NKX2-1', 'ZNF479', 'PISRT1', 'OR5H6', 'GYS2', 'GUCY2EP', 'FTMT', 'LINC00696', 'DEFB110', 'OPRD1', 'OR4D6', 'MYBPC2', 'EPS8L3', 'LPO', 'TARM1', 'OR7E24', 'SCGB1A1', 'UCMA', 'HOXC12', 'SCN1A', 'ENAM', 'FMO6P', 'OR1E2', 'GAGE2B', 'CPLX3', 'OR14C36', 'OR6B2', 'OR1B1', 'LOC729609', 'CLCA4', 'OR6M1', 'RESP18', 'MAGEA9B', 'ST8SIA3', 'OR1K1', 'TTTY9B', 'CYP7A1', 'GBX2', 'PRAMEF1', 'SCARNA11', 'SBSN', 'HBZ', 'HBG2', 'GPR78', 'OR4C12', 'SERPINI2', 'FRMPD2B', 'ZNF679', 'SNORA59B', 'TTTY8', 'HAO1', 'LINC00326', 'SPATA31A3', 'FAM27B', 'KRTAP21-1', 'SLC1A6', 'LINC00488', 'HTR3E', 'SLITRK3', 'OR4M2', 'MAGEB6', 'OR2M4', 'C12ORF50', 'KRTAP19-6', 'LYZL1', 'ADGRD2', 'YIPF7', 'GPRC6A', 'OR12D2', 'CCL24', 'SYCN', 'SNAR-F', 'CGB8', 'LINC00608', 'NYX', 'ANP32D', 'ASB10', 'LOC286238', 'ANGPTL3', 'TMEM88B', 'ALX4', 'ALLC', 'OR6F1', 'SNORD94', 'OC90', 'CD200R1L', 'SNORA38B', 'OR6C74', 'LMNTD1', 'OR51G2', 'GPR148', 'FAM71B', 'DPPA2', 'BRINP3', 'OR6A2', 'SLC51B', 'OR6K6', 'DYDC1', 'OR51F2', 'POU6F2', 'GDPD2', 'DKFZP434K028', 'ADGRG4', 'FFAR1', 'MAP3K15', 'KRT13', 'KRTAP2-1', 'CNBD1', 'SRY', 'NTS', 'LINC00575', 'RAX2', 'LINC00934', 'SERPINB3', 'BET1P1', 'C10ORF120', 'MOGAT3', 'SPACA3', 'IL17F', 'IL36RN', 'ARID3C', 'OR11H4', 'SLC6A5', 'CNTN5', 'TRHR', 'SNORA37', 'TSKS', 'SNORA16B', 'LOC284798', 'OR13C3', 'KCNK4', 'TCERG1L', 'GUCA2B', 'LINC00304', 'OR2A14', 'KRT25', 'KCNMB2', 'SLC2A2', 'MYH1', 'IFNA7', 'LINC00410', 'APOC3', 'TMEM179', 'HBE1', 'BMP15', 'OR2L8', 'SLC22A12', 'SNORA71A', 'KIR3DL3', 'GAGE12F', 'LINC01312', 'PRB4', 'MUSK', 'SPRR2E', 'FAM25BP', 'NLRP8', 'OR2A2', 'SPATA31C1', 'ITIH1', 'SEC14L3', 'NKAIN3', 'RPS4Y2', 'SNORA74A', 'LINC00710', 'LINC00928', 'SNORA76C', 'ZNF705A', 'DCT', 'OR2AT4', 'FAM170B', 'GPR22', 'TDRG1', 'SLC17A6', 'OR56B1', 'MAGEB3', 'PAPOLB', 'MAGEA1', 'TNP1', 'LOC100130264', 'OR11H6', 'HTR1A', 'SSX6', 'LRRC30', 'USH1C', 'CSN3', 'OR10W1', 'PROKR2', 'SPANXN3', 'USP9Y', 'CFHR2', 'SOX3', 'CTRC', 'GDNF', 'EDDM3B', 'KCNIP4-IT1', 'EPPIN', 'GKN2', 'PAGE5', 'MUC2', 'GCSAML-AS1', 'DMRTC1', 'BTN1A1', 'FAM205A', 'OR51B5', 'BCYRN1', 'DMP1', 'PPY2P', 'SCP2D1', 'ZCCHC13', 'SCARNA8', 'CHRNB3', 'LOC647859', 'HPVC1', 'SPOCK3', 'HMHB1', 'OCSTAMP', 'SPZ1', 'CRYGC', 'BPIFB3', 'ADAM29', 'ACER1', 'MAGEA12', 'PTH2', 'KRTAP4-3', 'ZFY', 'BPIFB4', 'LINC00479', 'ANKRD34C', 'GAGE2C', 'SLC32A1', 'NXPE1', 'CCKAR', 'KRTAP1-1', 'KRTAP1-5', 'TRIM48', 'ZAR1L', 'ASB15', 'FAM19A4', 'OR2T10', 'MS4A10', 'NUTM1', 'TMEM14E', 'VRTN', 'C4ORF51', 'KRT83', 'OR4F21', 'C6ORF10', 'KRT71', 'KRT3', 'C2ORF27B', 'KRTAP11-1', 'DAOA', 'KLRC4', 'HMSD', 'SOX1', 'LOC644669', 'AATK-AS1', 'ODF3', 'SPATA3', 'MMP20', 'CT47A1', 'ATOH7', 'AVP', 'AIRE', 'TPTE', 'CLEC4G', 'LINC01142', 'KCNU1', 'BTF3P11', 'FOXD4L3', 'MTVR2', 'OR2G6', 'PPP1R2P9', 'AADACL3', 'SSX9', 'RFX6', 'OR6S1', 'AFM', 'AKR1D1', 'LRRC52', 'C1ORF146', 'ZNF735', 'LOC400940', 'OACYLP', 'EPB42', 'TBR1', 'ASAP1-IT1', 'PCP4', 'B3GNT6', 'FAM170A', 'SLC22A10', 'GFI1B', 'MTNR1B', 'BTNL3', 'GNAS-AS1', 'MYH16', 'CPA2', 'LINC00303', 'IGLL1', 'HCRTR1', 'CNGA2', 'CA4', 'SH2D7', 'INSM2', 'CA6', 'CLCA1', 'HULC', 'CACNG7', 'PRR32', 'PRL', 'NF1P2', 'ZIM3', 'HYALP1', 'CT47A11', 'KRTAP3-2', 'CFHR4', 'TMEM132D', 'KCNJ16', 'USP50', 'TSPEAR-AS2', 'UGT1A4', 'PLA2G12B', 'TRIM55', 'NEUROG1', 'SSTR3', 'C11ORF87', 'SNORA72', 'DISC2', 'SERPINB11', 'NEUROD6', 'PRAMEF16', 'LINC01591', 'SNORA2B', 'PRSS48', 'GSC2', 'SNORA27', 'VWA5B1', 'OR51F1', 'OR10AD1', 'SCGB3A2', 'FERD3L', 'LINC00691', 'GABRR3', 'NKX6-2', 'RAPGEF4-AS1', 'ADRB3', 'GAGE12J', 'FAM47C', 'OR51L1', 'POM121L2', 'OR5H2', 'KRTAP12-1', 'C17ORF64', 'COX7B2', 'IFNW1', 'HIST1H3A', 'ANKRD20A20P', 'SLC10A1', 'LINC00032', 'GSTA5', 'KRTAP9-2', 'OR4D10', 'APCS', 'CGB2', 'OR5B17', 'AADAC', 'IFNL1', 'ZSCAN10', 'MMD2', 'FER1L6', 'UTS2R', 'OR51T1', 'LINC00452', 'MCF2', 'ART1', 'C12ORF56', 'OR52K2', 'MAGEA5', 'PATE3', 'CYP2C18', 'BAGE', 'PRDM9', 'GCGR', 'APOA5', 'PACRG-AS1', 'OLIG3', 'SNORD15B', 'SPINK14', 'B3GALT1', 'REG1B', 'CST9L', 'OR2A12', 'INS-IGF2', 'ISL1', 'DACH2', 'OTOP1', 'MT1B', 'GPR52', 'PDX1', 'TRIM49', 'NPSR1-AS1', 'CNTNAP5', 'OR4D5', 'FOXG1', 'NPHS2', 'EPGN', 'HAND1', 'LOC100130417', 'OR4N4', 'MYADML', 'PRSS57', 'MUC13', 'CLRN1', 'LINC00052', 'FAM138B', 'TRIM75P', 'HBM', 'PPBPP1', 'HRK', 'NHLH2', 'TAS2R42', 'NEUROG3', 'EXD1', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.0543290938032825e-15 NRMSE: 5.908250336202574e-16 MAPE: 6.2249534332536675e-12 Pearson Correlation: 0.1320193045652653 Spearman Correlation: 0.1302584820259604 Coefficient of Determination: -1.8180975198296476 RMSE: 1.2516048365591133 NRMSE: 0.19570085787805694 MAPE: 3640.5938874719127 Predictor: ElasticNet Pearson Correlation: 0.8395154222506441 Spearman Correlation: 0.8063781959265511 Coefficient of Determination: 0.6626751262825021 RMSE: 0.32628075251555716 NRMSE: 0.06311528019876918 MAPE: 259.03201461782095 Pearson Correlation: 0.3593082000237718 Spearman Correlation: 0.3554981982318982 Coefficient of Determination: 0.12033475845772434 RMSE: 0.6992748999911406 NRMSE: 0.10933858181395364 MAPE: 199.78333429995322 Predictor: RandomForests Pearson Correlation: 0.5706155589904446 Spearman Correlation: 0.5507947433204587 Coefficient of Determination: 0.2625441092346765 RMSE: 0.4824310996595935 NRMSE: 0.0933207791046877 MAPE: 205.09022641917477 Pearson Correlation: 0.41505925990711096 Spearman Correlation: 0.46172453736932534 Coefficient of Determination: 0.13515566507191967 RMSE: 0.6933590624870081 NRMSE: 0.10841358181330749 MAPE: 238.40020248050982 Protein: BRCA2 x_train_column_count: 366 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'DEFB109P1', 'OR8J3', 'TXLNGY', 'OR52B4', 'IFNA16', 'LINC00111', 'SNORA20', 'RAB9BP1', 'DAZL', 'OR5AN1', 'OR2T34', 'F13B', 'KRTAP19-8', 'OR11L1', 'LGALS14', 'SST', 'HBG1', 'OR2M3', 'SNORD15A', 'OTX2', 'FAM183CP', 'CLEC6A', 'OR10V1', 'NXF2B', 'TMPRSS11F', 'GPR151', 'OR8S1', 'OR2M7', 'OR5H14', 'PRM3', 'MS4A6E', 'OR8G5', 'DNAJB8', 'OR2G2', 'FGF23', 'MBD3L5', 'SCGB1C1', 'OR8B3', 'OR10A5', 'WFDC5', 'TCP10L2', 'TMEM252', 'ACOT12', 'LOC145845', 'PRSS3P2', 'PPY', 'MAGEB10', 'LINC01205', 'TAAR9', 'TSGA13', 'PLA2G2F', 'PSAPL1', 'SUN3', 'PSG7', 'CRYAA', 'USP26', 'SPRR1B', 'TTTY14', 'KRTAP10-12', 'OR1S2', 'OR2AG1', 'PRAMEF8', 'HIST1H4F', 'NPPC', 'SNORD89', 'MC2R', 'C1ORF87', 'NOX3', 'C20ORF173', 'LEUTX', 'SFTA3', 'FOXN3-AS2', 'XAGE5', 'LOC391003', 'VWC2L', 'LINC00636', 'SDR16C6P', 'FAM169B', 'LOC391343', 'ACTRT2', 'RPL13AP17', 'SLC5A7', 'ALOX12B', 'CAPZA3', 'KRTAP19-1', 'OR4S1', 'BMP10', 'OR5B2', 'TTTY15', 'OPN1MW', 'RTP2', 'SLC38A8', 'C10ORF53', 'OR4D9', 'FMR1NB', 'P2RX3', 'ARHGAP36', 'ARR3', 'CCKBR', 'SNORA70B', 'STATH', 'CASC8', 'TBC1D28', 'C11ORF94', 'KRT39', 'OR1N1', 'C1ORF94', 'SNORA34', 'TAS2R60', 'ACTR3BP2', 'SSX8', 'HNRNPCL1', 'IFITM5', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.8233608329624333 Spearman Correlation: 0.7940235700257565 Coefficient of Determination: 0.6779226728599903 RMSE: 0.10884851088697914 NRMSE: 0.0701230542032399 MAPE: 154.00041674750065 Pearson Correlation: -0.075669989078492 Spearman Correlation: 0.10939537899475056 Coefficient of Determination: -3.17134072187731e+25 RMSE: 1171949631806.9177 NRMSE: 1138577913171.8508 MAPE: 250993185026457.8 Predictor: ElasticNet Pearson Correlation: 0.5448033700149972 Spearman Correlation: 0.37609241522118203 Coefficient of Determination: 0.22835381122889808 RMSE: 0.16848122946491406 NRMSE: 0.10854000931867552 MAPE: 117.1612688641377 Pearson Correlation: 0.0742073027803069 Spearman Correlation: 0.08388383895061036 Coefficient of Determination: 0.003485410837059 RMSE: 0.20774439988872045 NRMSE: 0.20182879782448482 MAPE: 127.6625770624112 Predictor: RandomForests Pearson Correlation: 0.4505893622733489 Spearman Correlation: 0.40679228420189445 Coefficient of Determination: 0.1300315851192948 RMSE: 0.17889333399360874 NRMSE: 0.11524775905531245 MAPE: 111.32568151371014 Pearson Correlation: 0.02486783212240672 Spearman Correlation: 0.09583547444771427 Coefficient of Determination: 0.0004965316902778572 RMSE: 0.20805571395261316 NRMSE: 0.20213124710010896 MAPE: 155.45489973712253 Protein: CDKN2A x_train_column_count: 638 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'DEFB109P1', 'OR8J3', 'TXLNGY', 'OR52B4', 'IFNA16', 'LINC00111', 'SNORA20', 'RAB9BP1', 'DAZL', 'OR5AN1', 'OR2T34', 'F13B', 'KRTAP19-8', 'OR11L1', 'LGALS14', 'SST', 'HBG1', 'OR2M3', 'SNORD15A', 'OTX2', 'FAM183CP', 'CLEC6A', 'OR10V1', 'NXF2B', 'TMPRSS11F', 'GPR151', 'OR8S1', 'OR2M7', 'OR5H14', 'PRM3', 'MS4A6E', 'OR8G5', 'DNAJB8', 'OR2G2', 'FGF23', 'MBD3L5', 'SCGB1C1', 'OR8B3', 'OR10A5', 'WFDC5', 'TCP10L2', 'TMEM252', 'ACOT12', 'LOC145845', 'PRSS3P2', 'PPY', 'MAGEB10', 'LINC01205', 'TAAR9', 'TSGA13', 'PLA2G2F', 'PSAPL1', 'SUN3', 'PSG7', 'CRYAA', 'USP26', 'SPRR1B', 'TTTY14', 'KRTAP10-12', 'OR1S2', 'OR2AG1', 'PRAMEF8', 'HIST1H4F', 'NPPC', 'SNORD89', 'MC2R', 'C1ORF87', 'NOX3', 'C20ORF173', 'LEUTX', 'SFTA3', 'FOXN3-AS2', 'XAGE5', 'LOC391003', 'VWC2L', 'LINC00636', 'SDR16C6P', 'FAM169B', 'LOC391343', 'ACTRT2', 'RPL13AP17', 'SLC5A7', 'ALOX12B', 'CAPZA3', 'KRTAP19-1', 'OR4S1', 'BMP10', 'OR5B2', 'TTTY15', 'OPN1MW', 'RTP2', 'SLC38A8', 'C10ORF53', 'OR4D9', 'FMR1NB', 'P2RX3', 'ARHGAP36', 'ARR3', 'CCKBR', 'SNORA70B', 'STATH', 'CASC8', 'TBC1D28', 'C11ORF94', 'KRT39', 'OR1N1', 'C1ORF94', 'SNORA34', 'TAS2R60', 'ACTR3BP2', 'SSX8', 'HNRNPCL1', 'IFITM5', 'ANKRD18DP', 'PF4', 'BEND2', 'GAGE1', 'PROKR1', 'EDDM3A', 'CABS1', 'BPIFA3', 'KHDC1L', 'LINC00029', 'MMP23A', 'DEFB129', 'OR4C16', 'AKAP14', 'CYP11B2', 'HBD', 'OR10S1', 'LINC00114', 'PRSS1', 'DEFB104A', 'HSFY2', 'CABP5', 'CYP2W1', 'CYP3A4', 'SFTPC', 'CGB5', 'CCL15-CCL14', 'DMRT1', 'RGS8', 'PROP1', 'TKTL2', 'SERPINB4', 'CLRN2', 'KCNQ1DN', 'PRAP1', 'LINC00469', 'YWHAEP7', 'SNORA51', 'KRTAP25-1', 'DUXA', 'SNORA32', 'OR4F5', 'XKR7', 'OTP', 'SNORA54', 'SLC13A1', 'LHX9', 'SVOP', 'LGI3', 'KRTAP6-1', 'PAGE2', 'LOC646813', 'MYBPHL', 'OR6Y1', 'OR4K17', 'KRTAP19-2', 'TAS2R13', 'GAGE2D', 'OR7A17', 'OR2T35', 'FBP2', 'SPACA7', 'KRTAP19-3', 'ANKUB1', 'LOC285627', 'PLET1', 'GABRG3', 'INS', 'AVPR1B', 'PRAMEF20', 'OR4K2', 'NEU2', 'MGC27382', 'FCAMR', 'TCP10', 'LCNL1', 'CRLF2', 'LINC01101', 'OTOL1', 'DNTT', 'FDCSP', 'KRT85', 'FAM71C', 'C3ORF49', 'ZFAT-AS1', 'FOXE1', 'OR6B3', 'LINC00113', 'HPD', 'C9ORF135', 'IFNA13', 'KRTAP4-5', 'OR10H2', 'IZUMO1R', 'OLIG1', 'OR1L3', 'OR8H2', 'PRDM14', 'FGF6', 'XAGE3', 'SCARNA20', 'DAW1', 'GH1', 'TCEB3C', 'CCDC166', 'TMEM207', 'UGT2A3', 'PTF1A', 'SPANXN1', 'FAM27L', 'OR14I1', 'OR8G2', 'OR1L1', 'OLAH', 'PSG11', 'DEFB108B', 'DEFA4', 'ALPPL2', 'CYLC2', 'PRKAG3', 'SNORA47', 'SPATA19', 'IL26', 'FGA', 'PRG1', 'OR51I2', 'CER1', 'LINC00923', 'BARHL2', 'KRTAP10-1', 'C17ORF78', 'SLC25A31', 'SULT1C3', 'IVL', 'NANOS2', 'LCN9', 'HBBP1', 'LCE1D', 'PYDC2', 'TFF2', 'NKX2-1', 'ZNF479', 'PISRT1', 'OR5H6', 'GYS2', 'GUCY2EP', 'FTMT', 'LINC00696', 'DEFB110', 'OPRD1', 'OR4D6', 'MYBPC2', 'EPS8L3', 'LPO', 'TARM1', 'OR7E24', 'SCGB1A1', 'UCMA', 'HOXC12', 'SCN1A', 'ENAM', 'FMO6P', 'OR1E2', 'GAGE2B', 'CPLX3', 'OR14C36', 'OR6B2', 'OR1B1', 'LOC729609', 'CLCA4', 'OR6M1', 'RESP18', 'MAGEA9B', 'ST8SIA3', 'OR1K1', 'TTTY9B', 'CYP7A1', 'GBX2', 'PRAMEF1', 'SCARNA11', 'SBSN', 'HBZ', 'HBG2', 'GPR78', 'OR4C12', 'SERPINI2', 'FRMPD2B', 'ZNF679', 'SNORA59B', 'TTTY8', 'HAO1', 'LINC00326', 'SPATA31A3', 'FAM27B', 'KRTAP21-1', 'SLC1A6', 'LINC00488', 'HTR3E', 'SLITRK3', 'OR4M2', 'MAGEB6', 'OR2M4', 'C12ORF50', 'KRTAP19-6', 'LYZL1', 'ADGRD2', 'YIPF7', 'GPRC6A', 'OR12D2', 'CCL24', 'SYCN', 'SNAR-F', 'CGB8', 'LINC00608', 'NYX', 'ANP32D', 'ASB10', 'LOC286238', 'ANGPTL3', 'TMEM88B', 'ALX4', 'ALLC', 'OR6F1', 'SNORD94', 'OC90', 'CD200R1L', 'SNORA38B', 'OR6C74', 'LMNTD1', 'OR51G2', 'GPR148', 'FAM71B', 'DPPA2', 'BRINP3', 'OR6A2', 'SLC51B', 'OR6K6', 'DYDC1', 'OR51F2', 'POU6F2', 'GDPD2', 'DKFZP434K028', 'ADGRG4', 'FFAR1', 'MAP3K15', 'KRT13', 'KRTAP2-1', 'CNBD1', 'SRY', 'NTS', 'LINC00575', 'RAX2', 'LINC00934', 'SERPINB3', 'BET1P1', 'C10ORF120', 'MOGAT3', 'SPACA3', 'IL17F', 'IL36RN', 'ARID3C', 'OR11H4', 'SLC6A5', 'CNTN5', 'TRHR', 'SNORA37', 'TSKS', 'SNORA16B', 'LOC284798', 'OR13C3', 'KCNK4', 'TCERG1L', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 7.0709136714972096e-15 NRMSE: 1.5984884529212633e-15 MAPE: 5.094270804688172e-12 Pearson Correlation: 0.018737769520306556 Spearman Correlation: -0.07366924774623125 Coefficient of Determination: -16.927131414353425 RMSE: 2.670307510328914 NRMSE: 0.8045518259502603 MAPE: 1519.8576186405387 Predictor: ElasticNet Pearson Correlation: 0.8558200335423919 Spearman Correlation: 0.8127135306435999 Coefficient of Determination: 0.7041410540445266 RMSE: 0.3665837962323604 NRMSE: 0.08287188792412352 MAPE: 206.5532208576084 Pearson Correlation: 0.4670667011639691 Spearman Correlation: 0.2754223868128032 Coefficient of Determination: 0.2114734951789321 RMSE: 0.5600335229383648 NRMSE: 0.1687356200477146 MAPE: 199.3996583565105 Predictor: RandomForests Pearson Correlation: 0.6709436412709644 Spearman Correlation: 0.5756498619170534 Coefficient of Determination: 0.4436237559924451 RMSE: 0.5027073102256171 NRMSE: 0.11364469542796814 MAPE: 235.9946678524082 Pearson Correlation: 0.5825361521120446 Spearman Correlation: 0.4758893505510104 Coefficient of Determination: 0.32078484417540665 RMSE: 0.519768026304744 NRMSE: 0.1566038042496969 MAPE: 110.36912875495248 Protein: TP53 x_train_column_count: 1003 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'DEFB109P1', 'OR8J3', 'TXLNGY', 'OR52B4', 'IFNA16', 'LINC00111', 'SNORA20', 'RAB9BP1', 'DAZL', 'OR5AN1', 'OR2T34', 'F13B', 'KRTAP19-8', 'OR11L1', 'LGALS14', 'SST', 'HBG1', 'OR2M3', 'SNORD15A', 'OTX2', 'FAM183CP', 'CLEC6A', 'OR10V1', 'NXF2B', 'TMPRSS11F', 'GPR151', 'OR8S1', 'OR2M7', 'OR5H14', 'PRM3', 'MS4A6E', 'OR8G5', 'DNAJB8', 'OR2G2', 'FGF23', 'MBD3L5', 'SCGB1C1', 'OR8B3', 'OR10A5', 'WFDC5', 'TCP10L2', 'TMEM252', 'ACOT12', 'LOC145845', 'PRSS3P2', 'PPY', 'MAGEB10', 'LINC01205', 'TAAR9', 'TSGA13', 'PLA2G2F', 'PSAPL1', 'SUN3', 'PSG7', 'CRYAA', 'USP26', 'SPRR1B', 'TTTY14', 'KRTAP10-12', 'OR1S2', 'OR2AG1', 'PRAMEF8', 'HIST1H4F', 'NPPC', 'SNORD89', 'MC2R', 'C1ORF87', 'NOX3', 'C20ORF173', 'LEUTX', 'SFTA3', 'FOXN3-AS2', 'XAGE5', 'LOC391003', 'VWC2L', 'LINC00636', 'SDR16C6P', 'FAM169B', 'LOC391343', 'ACTRT2', 'RPL13AP17', 'SLC5A7', 'ALOX12B', 'CAPZA3', 'KRTAP19-1', 'OR4S1', 'BMP10', 'OR5B2', 'TTTY15', 'OPN1MW', 'RTP2', 'SLC38A8', 'C10ORF53', 'OR4D9', 'FMR1NB', 'P2RX3', 'ARHGAP36', 'ARR3', 'CCKBR', 'SNORA70B', 'STATH', 'CASC8', 'TBC1D28', 'C11ORF94', 'KRT39', 'OR1N1', 'C1ORF94', 'SNORA34', 'TAS2R60', 'ACTR3BP2', 'SSX8', 'HNRNPCL1', 'IFITM5', 'ANKRD18DP', 'PF4', 'BEND2', 'GAGE1', 'PROKR1', 'EDDM3A', 'CABS1', 'BPIFA3', 'KHDC1L', 'LINC00029', 'MMP23A', 'DEFB129', 'OR4C16', 'AKAP14', 'CYP11B2', 'HBD', 'OR10S1', 'LINC00114', 'PRSS1', 'DEFB104A', 'HSFY2', 'CABP5', 'CYP2W1', 'CYP3A4', 'SFTPC', 'CGB5', 'CCL15-CCL14', 'DMRT1', 'RGS8', 'PROP1', 'TKTL2', 'SERPINB4', 'CLRN2', 'KCNQ1DN', 'PRAP1', 'LINC00469', 'YWHAEP7', 'SNORA51', 'KRTAP25-1', 'DUXA', 'SNORA32', 'OR4F5', 'XKR7', 'OTP', 'SNORA54', 'SLC13A1', 'LHX9', 'SVOP', 'LGI3', 'KRTAP6-1', 'PAGE2', 'LOC646813', 'MYBPHL', 'OR6Y1', 'OR4K17', 'KRTAP19-2', 'TAS2R13', 'GAGE2D', 'OR7A17', 'OR2T35', 'FBP2', 'SPACA7', 'KRTAP19-3', 'ANKUB1', 'LOC285627', 'PLET1', 'GABRG3', 'INS', 'AVPR1B', 'PRAMEF20', 'OR4K2', 'NEU2', 'MGC27382', 'FCAMR', 'TCP10', 'LCNL1', 'CRLF2', 'LINC01101', 'OTOL1', 'DNTT', 'FDCSP', 'KRT85', 'FAM71C', 'C3ORF49', 'ZFAT-AS1', 'FOXE1', 'OR6B3', 'LINC00113', 'HPD', 'C9ORF135', 'IFNA13', 'KRTAP4-5', 'OR10H2', 'IZUMO1R', 'OLIG1', 'OR1L3', 'OR8H2', 'PRDM14', 'FGF6', 'XAGE3', 'SCARNA20', 'DAW1', 'GH1', 'TCEB3C', 'CCDC166', 'TMEM207', 'UGT2A3', 'PTF1A', 'SPANXN1', 'FAM27L', 'OR14I1', 'OR8G2', 'OR1L1', 'OLAH', 'PSG11', 'DEFB108B', 'DEFA4', 'ALPPL2', 'CYLC2', 'PRKAG3', 'SNORA47', 'SPATA19', 'IL26', 'FGA', 'PRG1', 'OR51I2', 'CER1', 'LINC00923', 'BARHL2', 'KRTAP10-1', 'C17ORF78', 'SLC25A31', 'SULT1C3', 'IVL', 'NANOS2', 'LCN9', 'HBBP1', 'LCE1D', 'PYDC2', 'TFF2', 'NKX2-1', 'ZNF479', 'PISRT1', 'OR5H6', 'GYS2', 'GUCY2EP', 'FTMT', 'LINC00696', 'DEFB110', 'OPRD1', 'OR4D6', 'MYBPC2', 'EPS8L3', 'LPO', 'TARM1', 'OR7E24', 'SCGB1A1', 'UCMA', 'HOXC12', 'SCN1A', 'ENAM', 'FMO6P', 'OR1E2', 'GAGE2B', 'CPLX3', 'OR14C36', 'OR6B2', 'OR1B1', 'LOC729609', 'CLCA4', 'OR6M1', 'RESP18', 'MAGEA9B', 'ST8SIA3', 'OR1K1', 'TTTY9B', 'CYP7A1', 'GBX2', 'PRAMEF1', 'SCARNA11', 'SBSN', 'HBZ', 'HBG2', 'GPR78', 'OR4C12', 'SERPINI2', 'FRMPD2B', 'ZNF679', 'SNORA59B', 'TTTY8', 'HAO1', 'LINC00326', 'SPATA31A3', 'FAM27B', 'KRTAP21-1', 'SLC1A6', 'LINC00488', 'HTR3E', 'SLITRK3', 'OR4M2', 'MAGEB6', 'OR2M4', 'C12ORF50', 'KRTAP19-6', 'LYZL1', 'ADGRD2', 'YIPF7', 'GPRC6A', 'OR12D2', 'CCL24', 'SYCN', 'SNAR-F', 'CGB8', 'LINC00608', 'NYX', 'ANP32D', 'ASB10', 'LOC286238', 'ANGPTL3', 'TMEM88B', 'ALX4', 'ALLC', 'OR6F1', 'SNORD94', 'OC90', 'CD200R1L', 'SNORA38B', 'OR6C74', 'LMNTD1', 'OR51G2', 'GPR148', 'FAM71B', 'DPPA2', 'BRINP3', 'OR6A2', 'SLC51B', 'OR6K6', 'DYDC1', 'OR51F2', 'POU6F2', 'GDPD2', 'DKFZP434K028', 'ADGRG4', 'FFAR1', 'MAP3K15', 'KRT13', 'KRTAP2-1', 'CNBD1', 'SRY', 'NTS', 'LINC00575', 'RAX2', 'LINC00934', 'SERPINB3', 'BET1P1', 'C10ORF120', 'MOGAT3', 'SPACA3', 'IL17F', 'IL36RN', 'ARID3C', 'OR11H4', 'SLC6A5', 'CNTN5', 'TRHR', 'SNORA37', 'TSKS', 'SNORA16B', 'LOC284798', 'OR13C3', 'KCNK4', 'TCERG1L', 'GUCA2B', 'LINC00304', 'OR2A14', 'KRT25', 'KCNMB2', 'SLC2A2', 'MYH1', 'IFNA7', 'LINC00410', 'APOC3', 'TMEM179', 'HBE1', 'BMP15', 'OR2L8', 'SLC22A12', 'SNORA71A', 'KIR3DL3', 'GAGE12F', 'LINC01312', 'PRB4', 'MUSK', 'SPRR2E', 'FAM25BP', 'NLRP8', 'OR2A2', 'SPATA31C1', 'ITIH1', 'SEC14L3', 'NKAIN3', 'RPS4Y2', 'SNORA74A', 'LINC00710', 'LINC00928', 'SNORA76C', 'ZNF705A', 'DCT', 'OR2AT4', 'FAM170B', 'GPR22', 'TDRG1', 'SLC17A6', 'OR56B1', 'MAGEB3', 'PAPOLB', 'MAGEA1', 'TNP1', 'LOC100130264', 'OR11H6', 'HTR1A', 'SSX6', 'LRRC30', 'USH1C', 'CSN3', 'OR10W1', 'PROKR2', 'SPANXN3', 'USP9Y', 'CFHR2', 'SOX3', 'CTRC', 'GDNF', 'EDDM3B', 'KCNIP4-IT1', 'EPPIN', 'GKN2', 'PAGE5', 'MUC2', 'GCSAML-AS1', 'DMRTC1', 'BTN1A1', 'FAM205A', 'OR51B5', 'BCYRN1', 'DMP1', 'PPY2P', 'SCP2D1', 'ZCCHC13', 'SCARNA8', 'CHRNB3', 'LOC647859', 'HPVC1', 'SPOCK3', 'HMHB1', 'OCSTAMP', 'SPZ1', 'CRYGC', 'BPIFB3', 'ADAM29', 'ACER1', 'MAGEA12', 'PTH2', 'KRTAP4-3', 'ZFY', 'BPIFB4', 'LINC00479', 'ANKRD34C', 'GAGE2C', 'SLC32A1', 'NXPE1', 'CCKAR', 'KRTAP1-1', 'KRTAP1-5', 'TRIM48', 'ZAR1L', 'ASB15', 'FAM19A4', 'OR2T10', 'MS4A10', 'NUTM1', 'TMEM14E', 'VRTN', 'C4ORF51', 'KRT83', 'OR4F21', 'C6ORF10', 'KRT71', 'KRT3', 'C2ORF27B', 'KRTAP11-1', 'DAOA', 'KLRC4', 'HMSD', 'SOX1', 'LOC644669', 'AATK-AS1', 'ODF3', 'SPATA3', 'MMP20', 'CT47A1', 'ATOH7', 'AVP', 'AIRE', 'TPTE', 'CLEC4G', 'LINC01142', 'KCNU1', 'BTF3P11', 'FOXD4L3', 'MTVR2', 'OR2G6', 'PPP1R2P9', 'AADACL3', 'SSX9', 'RFX6', 'OR6S1', 'AFM', 'AKR1D1', 'LRRC52', 'C1ORF146', 'ZNF735', 'LOC400940', 'OACYLP', 'EPB42', 'TBR1', 'ASAP1-IT1', 'PCP4', 'B3GNT6', 'FAM170A', 'SLC22A10', 'GFI1B', 'MTNR1B', 'BTNL3', 'GNAS-AS1', 'MYH16', 'CPA2', 'LINC00303', 'IGLL1', 'HCRTR1', 'CNGA2', 'CA4', 'SH2D7', 'INSM2', 'CA6', 'CLCA1', 'HULC', 'CACNG7', 'PRR32', 'PRL', 'NF1P2', 'ZIM3', 'HYALP1', 'CT47A11', 'KRTAP3-2', 'CFHR4', 'TMEM132D', 'KCNJ16', 'USP50', 'TSPEAR-AS2', 'UGT1A4', 'PLA2G12B', 'TRIM55', 'NEUROG1', 'SSTR3', 'C11ORF87', 'SNORA72', 'DISC2', 'SERPINB11', 'NEUROD6', 'PRAMEF16', 'LINC01591', 'SNORA2B', 'PRSS48', 'GSC2', 'SNORA27', 'VWA5B1', 'OR51F1', 'OR10AD1', 'SCGB3A2', 'FERD3L', 'LINC00691', 'GABRR3', 'NKX6-2', 'RAPGEF4-AS1', 'ADRB3', 'GAGE12J', 'FAM47C', 'OR51L1', 'POM121L2', 'OR5H2', 'KRTAP12-1', 'C17ORF64', 'COX7B2', 'IFNW1', 'HIST1H3A', 'ANKRD20A20P', 'SLC10A1', 'LINC00032', 'GSTA5', 'KRTAP9-2', 'OR4D10', 'APCS', 'CGB2', 'OR5B17', 'AADAC', 'IFNL1', 'ZSCAN10', 'MMD2', 'FER1L6', 'UTS2R', 'OR51T1', 'LINC00452', 'MCF2', 'ART1', 'C12ORF56', 'OR52K2', 'MAGEA5', 'PATE3', 'CYP2C18', 'BAGE', 'PRDM9', 'GCGR', 'APOA5', 'PACRG-AS1', 'OLIG3', 'SNORD15B', 'SPINK14', 'B3GALT1', 'REG1B', 'CST9L', 'OR2A12', 'INS-IGF2', 'ISL1', 'DACH2', 'OTOP1', 'MT1B', 'GPR52', 'PDX1', 'TRIM49', 'NPSR1-AS1', 'CNTNAP5', 'OR4D5', 'FOXG1', 'NPHS2', 'EPGN', 'HAND1', 'LOC100130417', 'OR4N4', 'MYADML', 'PRSS57', 'MUC13', 'CLRN1', 'LINC00052', 'FAM138B', 'TRIM75P', 'HBM', 'PPBPP1', 'HRK', 'NHLH2', 'TAS2R42', 'NEUROG3', 'EXD1', 'OR13H1', 'IGFBP1', 'OR5K1', 'MMP21', 'PSKH2', 'OR10G8', 'ACSM2A', 'SYT10', 'CPNE6', 'COL20A1', 'MAGEA11', 'MAS1L', 'MBL2', 'PSG4', 'SSX5', 'ALAS2', 'LINC00202-2', 'ADCYAP1R1', 'SPINT3', 'HYMAI', 'CLEC4M', 'OR3A2', 'NPSR1', 'OPRM1', 'PPAN-P2RY11', 'NYAP2', 'TNP2', 'SLITRK1', 'CCER1', 'HIST2H2AB', 'VCX3A', 'PWAR4', 'SFTPB', 'PASD1', 'SHD', 'SLCO4A1-AS1', 'POU4F2', 'CALHM3', 'KRTAP10-6', 'GPHA2', 'C4ORF50', 'LHCGR', 'ADGRG7', 'OR2T2', 'PNLIPRP1', 'LINC01565', 'NBPF22P', 'TMEM202', 'TNFSF18', 'CACNG3', 'OR2K2', 'OTC', 'SCARNA14', 'RNF151', 'LOC392196', 'IFNL2', 'ARL14', 'SNORD115-26', 'H3F3AP5', 'IQCF2', 'NXNL1', 'CYP1A2', 'F2', 'SALL3', 'LOC285629', 'FOXR1', 'NMUR2', 'SNORA68', 'AWAT1', 'SDC4P', 'SNORA16A', 'SCTR', 'KCNB2', 'AMER3', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.9533152041732012e-15 NRMSE: 4.694340793494837e-16 MAPE: 7.28973996936754e-12 Pearson Correlation: 0.25169496378633205 Spearman Correlation: 0.20407985136971785 Coefficient of Determination: -1.6457697786991101 RMSE: 0.7023783024788572 NRMSE: 0.2228923275193124 MAPE: 718.2878603805864 Predictor: ElasticNet Pearson Correlation: 0.8639429633155309 Spearman Correlation: 0.7967143481091111 Coefficient of Determination: 0.701555013184299 RMSE: 0.24590063246449725 NRMSE: 0.05909652306284482 MAPE: 409.0246190649695 Pearson Correlation: 0.46916078749040346 Spearman Correlation: 0.40020698512450287 Coefficient of Determination: 0.20798499197379816 RMSE: 0.3842923746061818 NRMSE: 0.12195112166989774 MAPE: 229.4877112986543 Predictor: RandomForests Pearson Correlation: 0.6554794006101635 Spearman Correlation: 0.5503354566830744 Coefficient of Determination: 0.36080838849234664 RMSE: 0.3598678382927371 NRMSE: 0.08648590201700003 MAPE: 540.9786670935528 Pearson Correlation: 0.613604399659856 Spearman Correlation: 0.49421334766625485 Coefficient of Determination: 0.2874274640521677 RMSE: 0.3645101292127265 NRMSE: 0.11567343526679566 MAPE: 188.5180424568354 Protein: CTNNB1 x_train_column_count: 1003 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'DEFB109P1', 'OR8J3', 'TXLNGY', 'OR52B4', 'IFNA16', 'LINC00111', 'SNORA20', 'RAB9BP1', 'DAZL', 'OR5AN1', 'OR2T34', 'F13B', 'KRTAP19-8', 'OR11L1', 'LGALS14', 'SST', 'HBG1', 'OR2M3', 'SNORD15A', 'OTX2', 'FAM183CP', 'CLEC6A', 'OR10V1', 'NXF2B', 'TMPRSS11F', 'GPR151', 'OR8S1', 'OR2M7', 'OR5H14', 'PRM3', 'MS4A6E', 'OR8G5', 'DNAJB8', 'OR2G2', 'FGF23', 'MBD3L5', 'SCGB1C1', 'OR8B3', 'OR10A5', 'WFDC5', 'TCP10L2', 'TMEM252', 'ACOT12', 'LOC145845', 'PRSS3P2', 'PPY', 'MAGEB10', 'LINC01205', 'TAAR9', 'TSGA13', 'PLA2G2F', 'PSAPL1', 'SUN3', 'PSG7', 'CRYAA', 'USP26', 'SPRR1B', 'TTTY14', 'KRTAP10-12', 'OR1S2', 'OR2AG1', 'PRAMEF8', 'HIST1H4F', 'NPPC', 'SNORD89', 'MC2R', 'C1ORF87', 'NOX3', 'C20ORF173', 'LEUTX', 'SFTA3', 'FOXN3-AS2', 'XAGE5', 'LOC391003', 'VWC2L', 'LINC00636', 'SDR16C6P', 'FAM169B', 'LOC391343', 'ACTRT2', 'RPL13AP17', 'SLC5A7', 'ALOX12B', 'CAPZA3', 'KRTAP19-1', 'OR4S1', 'BMP10', 'OR5B2', 'TTTY15', 'OPN1MW', 'RTP2', 'SLC38A8', 'C10ORF53', 'OR4D9', 'FMR1NB', 'P2RX3', 'ARHGAP36', 'ARR3', 'CCKBR', 'SNORA70B', 'STATH', 'CASC8', 'TBC1D28', 'C11ORF94', 'KRT39', 'OR1N1', 'C1ORF94', 'SNORA34', 'TAS2R60', 'ACTR3BP2', 'SSX8', 'HNRNPCL1', 'IFITM5', 'ANKRD18DP', 'PF4', 'BEND2', 'GAGE1', 'PROKR1', 'EDDM3A', 'CABS1', 'BPIFA3', 'KHDC1L', 'LINC00029', 'MMP23A', 'DEFB129', 'OR4C16', 'AKAP14', 'CYP11B2', 'HBD', 'OR10S1', 'LINC00114', 'PRSS1', 'DEFB104A', 'HSFY2', 'CABP5', 'CYP2W1', 'CYP3A4', 'SFTPC', 'CGB5', 'CCL15-CCL14', 'DMRT1', 'RGS8', 'PROP1', 'TKTL2', 'SERPINB4', 'CLRN2', 'KCNQ1DN', 'PRAP1', 'LINC00469', 'YWHAEP7', 'SNORA51', 'KRTAP25-1', 'DUXA', 'SNORA32', 'OR4F5', 'XKR7', 'OTP', 'SNORA54', 'SLC13A1', 'LHX9', 'SVOP', 'LGI3', 'KRTAP6-1', 'PAGE2', 'LOC646813', 'MYBPHL', 'OR6Y1', 'OR4K17', 'KRTAP19-2', 'TAS2R13', 'GAGE2D', 'OR7A17', 'OR2T35', 'FBP2', 'SPACA7', 'KRTAP19-3', 'ANKUB1', 'LOC285627', 'PLET1', 'GABRG3', 'INS', 'AVPR1B', 'PRAMEF20', 'OR4K2', 'NEU2', 'MGC27382', 'FCAMR', 'TCP10', 'LCNL1', 'CRLF2', 'LINC01101', 'OTOL1', 'DNTT', 'FDCSP', 'KRT85', 'FAM71C', 'C3ORF49', 'ZFAT-AS1', 'FOXE1', 'OR6B3', 'LINC00113', 'HPD', 'C9ORF135', 'IFNA13', 'KRTAP4-5', 'OR10H2', 'IZUMO1R', 'OLIG1', 'OR1L3', 'OR8H2', 'PRDM14', 'FGF6', 'XAGE3', 'SCARNA20', 'DAW1', 'GH1', 'TCEB3C', 'CCDC166', 'TMEM207', 'UGT2A3', 'PTF1A', 'SPANXN1', 'FAM27L', 'OR14I1', 'OR8G2', 'OR1L1', 'OLAH', 'PSG11', 'DEFB108B', 'DEFA4', 'ALPPL2', 'CYLC2', 'PRKAG3', 'SNORA47', 'SPATA19', 'IL26', 'FGA', 'PRG1', 'OR51I2', 'CER1', 'LINC00923', 'BARHL2', 'KRTAP10-1', 'C17ORF78', 'SLC25A31', 'SULT1C3', 'IVL', 'NANOS2', 'LCN9', 'HBBP1', 'LCE1D', 'PYDC2', 'TFF2', 'NKX2-1', 'ZNF479', 'PISRT1', 'OR5H6', 'GYS2', 'GUCY2EP', 'FTMT', 'LINC00696', 'DEFB110', 'OPRD1', 'OR4D6', 'MYBPC2', 'EPS8L3', 'LPO', 'TARM1', 'OR7E24', 'SCGB1A1', 'UCMA', 'HOXC12', 'SCN1A', 'ENAM', 'FMO6P', 'OR1E2', 'GAGE2B', 'CPLX3', 'OR14C36', 'OR6B2', 'OR1B1', 'LOC729609', 'CLCA4', 'OR6M1', 'RESP18', 'MAGEA9B', 'ST8SIA3', 'OR1K1', 'TTTY9B', 'CYP7A1', 'GBX2', 'PRAMEF1', 'SCARNA11', 'SBSN', 'HBZ', 'HBG2', 'GPR78', 'OR4C12', 'SERPINI2', 'FRMPD2B', 'ZNF679', 'SNORA59B', 'TTTY8', 'HAO1', 'LINC00326', 'SPATA31A3', 'FAM27B', 'KRTAP21-1', 'SLC1A6', 'LINC00488', 'HTR3E', 'SLITRK3', 'OR4M2', 'MAGEB6', 'OR2M4', 'C12ORF50', 'KRTAP19-6', 'LYZL1', 'ADGRD2', 'YIPF7', 'GPRC6A', 'OR12D2', 'CCL24', 'SYCN', 'SNAR-F', 'CGB8', 'LINC00608', 'NYX', 'ANP32D', 'ASB10', 'LOC286238', 'ANGPTL3', 'TMEM88B', 'ALX4', 'ALLC', 'OR6F1', 'SNORD94', 'OC90', 'CD200R1L', 'SNORA38B', 'OR6C74', 'LMNTD1', 'OR51G2', 'GPR148', 'FAM71B', 'DPPA2', 'BRINP3', 'OR6A2', 'SLC51B', 'OR6K6', 'DYDC1', 'OR51F2', 'POU6F2', 'GDPD2', 'DKFZP434K028', 'ADGRG4', 'FFAR1', 'MAP3K15', 'KRT13', 'KRTAP2-1', 'CNBD1', 'SRY', 'NTS', 'LINC00575', 'RAX2', 'LINC00934', 'SERPINB3', 'BET1P1', 'C10ORF120', 'MOGAT3', 'SPACA3', 'IL17F', 'IL36RN', 'ARID3C', 'OR11H4', 'SLC6A5', 'CNTN5', 'TRHR', 'SNORA37', 'TSKS', 'SNORA16B', 'LOC284798', 'OR13C3', 'KCNK4', 'TCERG1L', 'GUCA2B', 'LINC00304', 'OR2A14', 'KRT25', 'KCNMB2', 'SLC2A2', 'MYH1', 'IFNA7', 'LINC00410', 'APOC3', 'TMEM179', 'HBE1', 'BMP15', 'OR2L8', 'SLC22A12', 'SNORA71A', 'KIR3DL3', 'GAGE12F', 'LINC01312', 'PRB4', 'MUSK', 'SPRR2E', 'FAM25BP', 'NLRP8', 'OR2A2', 'SPATA31C1', 'ITIH1', 'SEC14L3', 'NKAIN3', 'RPS4Y2', 'SNORA74A', 'LINC00710', 'LINC00928', 'SNORA76C', 'ZNF705A', 'DCT', 'OR2AT4', 'FAM170B', 'GPR22', 'TDRG1', 'SLC17A6', 'OR56B1', 'MAGEB3', 'PAPOLB', 'MAGEA1', 'TNP1', 'LOC100130264', 'OR11H6', 'HTR1A', 'SSX6', 'LRRC30', 'USH1C', 'CSN3', 'OR10W1', 'PROKR2', 'SPANXN3', 'USP9Y', 'CFHR2', 'SOX3', 'CTRC', 'GDNF', 'EDDM3B', 'KCNIP4-IT1', 'EPPIN', 'GKN2', 'PAGE5', 'MUC2', 'GCSAML-AS1', 'DMRTC1', 'BTN1A1', 'FAM205A', 'OR51B5', 'BCYRN1', 'DMP1', 'PPY2P', 'SCP2D1', 'ZCCHC13', 'SCARNA8', 'CHRNB3', 'LOC647859', 'HPVC1', 'SPOCK3', 'HMHB1', 'OCSTAMP', 'SPZ1', 'CRYGC', 'BPIFB3', 'ADAM29', 'ACER1', 'MAGEA12', 'PTH2', 'KRTAP4-3', 'ZFY', 'BPIFB4', 'LINC00479', 'ANKRD34C', 'GAGE2C', 'SLC32A1', 'NXPE1', 'CCKAR', 'KRTAP1-1', 'KRTAP1-5', 'TRIM48', 'ZAR1L', 'ASB15', 'FAM19A4', 'OR2T10', 'MS4A10', 'NUTM1', 'TMEM14E', 'VRTN', 'C4ORF51', 'KRT83', 'OR4F21', 'C6ORF10', 'KRT71', 'KRT3', 'C2ORF27B', 'KRTAP11-1', 'DAOA', 'KLRC4', 'HMSD', 'SOX1', 'LOC644669', 'AATK-AS1', 'ODF3', 'SPATA3', 'MMP20', 'CT47A1', 'ATOH7', 'AVP', 'AIRE', 'TPTE', 'CLEC4G', 'LINC01142', 'KCNU1', 'BTF3P11', 'FOXD4L3', 'MTVR2', 'OR2G6', 'PPP1R2P9', 'AADACL3', 'SSX9', 'RFX6', 'OR6S1', 'AFM', 'AKR1D1', 'LRRC52', 'C1ORF146', 'ZNF735', 'LOC400940', 'OACYLP', 'EPB42', 'TBR1', 'ASAP1-IT1', 'PCP4', 'B3GNT6', 'FAM170A', 'SLC22A10', 'GFI1B', 'MTNR1B', 'BTNL3', 'GNAS-AS1', 'MYH16', 'CPA2', 'LINC00303', 'IGLL1', 'HCRTR1', 'CNGA2', 'CA4', 'SH2D7', 'INSM2', 'CA6', 'CLCA1', 'HULC', 'CACNG7', 'PRR32', 'PRL', 'NF1P2', 'ZIM3', 'HYALP1', 'CT47A11', 'KRTAP3-2', 'CFHR4', 'TMEM132D', 'KCNJ16', 'USP50', 'TSPEAR-AS2', 'UGT1A4', 'PLA2G12B', 'TRIM55', 'NEUROG1', 'SSTR3', 'C11ORF87', 'SNORA72', 'DISC2', 'SERPINB11', 'NEUROD6', 'PRAMEF16', 'LINC01591', 'SNORA2B', 'PRSS48', 'GSC2', 'SNORA27', 'VWA5B1', 'OR51F1', 'OR10AD1', 'SCGB3A2', 'FERD3L', 'LINC00691', 'GABRR3', 'NKX6-2', 'RAPGEF4-AS1', 'ADRB3', 'GAGE12J', 'FAM47C', 'OR51L1', 'POM121L2', 'OR5H2', 'KRTAP12-1', 'C17ORF64', 'COX7B2', 'IFNW1', 'HIST1H3A', 'ANKRD20A20P', 'SLC10A1', 'LINC00032', 'GSTA5', 'KRTAP9-2', 'OR4D10', 'APCS', 'CGB2', 'OR5B17', 'AADAC', 'IFNL1', 'ZSCAN10', 'MMD2', 'FER1L6', 'UTS2R', 'OR51T1', 'LINC00452', 'MCF2', 'ART1', 'C12ORF56', 'OR52K2', 'MAGEA5', 'PATE3', 'CYP2C18', 'BAGE', 'PRDM9', 'GCGR', 'APOA5', 'PACRG-AS1', 'OLIG3', 'SNORD15B', 'SPINK14', 'B3GALT1', 'REG1B', 'CST9L', 'OR2A12', 'INS-IGF2', 'ISL1', 'DACH2', 'OTOP1', 'MT1B', 'GPR52', 'PDX1', 'TRIM49', 'NPSR1-AS1', 'CNTNAP5', 'OR4D5', 'FOXG1', 'NPHS2', 'EPGN', 'HAND1', 'LOC100130417', 'OR4N4', 'MYADML', 'PRSS57', 'MUC13', 'CLRN1', 'LINC00052', 'FAM138B', 'TRIM75P', 'HBM', 'PPBPP1', 'HRK', 'NHLH2', 'TAS2R42', 'NEUROG3', 'EXD1', 'OR13H1', 'IGFBP1', 'OR5K1', 'MMP21', 'PSKH2', 'OR10G8', 'ACSM2A', 'SYT10', 'CPNE6', 'COL20A1', 'MAGEA11', 'MAS1L', 'MBL2', 'PSG4', 'SSX5', 'ALAS2', 'LINC00202-2', 'ADCYAP1R1', 'SPINT3', 'HYMAI', 'CLEC4M', 'OR3A2', 'NPSR1', 'OPRM1', 'PPAN-P2RY11', 'NYAP2', 'TNP2', 'SLITRK1', 'CCER1', 'HIST2H2AB', 'VCX3A', 'PWAR4', 'SFTPB', 'PASD1', 'SHD', 'SLCO4A1-AS1', 'POU4F2', 'CALHM3', 'KRTAP10-6', 'GPHA2', 'C4ORF50', 'LHCGR', 'ADGRG7', 'OR2T2', 'PNLIPRP1', 'LINC01565', 'NBPF22P', 'TMEM202', 'TNFSF18', 'CACNG3', 'OR2K2', 'OTC', 'SCARNA14', 'RNF151', 'LOC392196', 'IFNL2', 'ARL14', 'SNORD115-26', 'H3F3AP5', 'IQCF2', 'NXNL1', 'CYP1A2', 'F2', 'SALL3', 'LOC285629', 'FOXR1', 'NMUR2', 'SNORA68', 'AWAT1', 'SDC4P', 'SNORA16A', 'SCTR', 'KCNB2', 'AMER3', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 3.1297354471032873e-15 NRMSE: 7.559017116953163e-16 MAPE: 2.976168192052226e-12 Pearson Correlation: 0.05353888788606333 Spearman Correlation: 0.011204628486639485 Coefficient of Determination: -1.5609183398286586 RMSE: 1.284157092532732 NRMSE: 0.2699850921984551 MAPE: 684.973089017786 Predictor: ElasticNet Pearson Correlation: 0.8830869714725302 Spearman Correlation: 0.8839238808421459 Coefficient of Determination: 0.7345012467369539 RMSE: 0.36657385231744016 NRMSE: 0.0885358545834799 MAPE: 352.8801982941252 Pearson Correlation: 0.18620284972874715 Spearman Correlation: 0.1904687090861482 Coefficient of Determination: -0.09409561732858851 RMSE: 0.8393593426531603 NRMSE: 0.1764694606536793 MAPE: 600.4227737368318 Predictor: RandomForests Pearson Correlation: 0.5107080497160787 Spearman Correlation: 0.5590889050610455 Coefficient of Determination: 0.21862823013812638 RMSE: 0.6288674245878954 NRMSE: 0.15188566915947624 MAPE: 508.7703963024707 Pearson Correlation: 0.0509370913536166 Spearman Correlation: 0.11746530505367898 Coefficient of Determination: -0.11605001438247142 RMSE: 0.8477389123457137 NRMSE: 0.178231206867739 MAPE: 731.0720073221628 Protein: CCNE1 x_train_column_count: 366 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'DEFB109P1', 'OR8J3', 'TXLNGY', 'OR52B4', 'IFNA16', 'LINC00111', 'SNORA20', 'RAB9BP1', 'DAZL', 'OR5AN1', 'OR2T34', 'F13B', 'KRTAP19-8', 'OR11L1', 'LGALS14', 'SST', 'HBG1', 'OR2M3', 'SNORD15A', 'OTX2', 'FAM183CP', 'CLEC6A', 'OR10V1', 'NXF2B', 'TMPRSS11F', 'GPR151', 'OR8S1', 'OR2M7', 'OR5H14', 'PRM3', 'MS4A6E', 'OR8G5', 'DNAJB8', 'OR2G2', 'FGF23', 'MBD3L5', 'SCGB1C1', 'OR8B3', 'OR10A5', 'WFDC5', 'TCP10L2', 'TMEM252', 'ACOT12', 'LOC145845', 'PRSS3P2', 'PPY', 'MAGEB10', 'LINC01205', 'TAAR9', 'TSGA13', 'PLA2G2F', 'PSAPL1', 'SUN3', 'PSG7', 'CRYAA', 'USP26', 'SPRR1B', 'TTTY14', 'KRTAP10-12', 'OR1S2', 'OR2AG1', 'PRAMEF8', 'HIST1H4F', 'NPPC', 'SNORD89', 'MC2R', 'C1ORF87', 'NOX3', 'C20ORF173', 'LEUTX', 'SFTA3', 'FOXN3-AS2', 'XAGE5', 'LOC391003', 'VWC2L', 'LINC00636', 'SDR16C6P', 'FAM169B', 'LOC391343', 'ACTRT2', 'RPL13AP17', 'SLC5A7', 'ALOX12B', 'CAPZA3', 'KRTAP19-1', 'OR4S1', 'BMP10', 'OR5B2', 'TTTY15', 'OPN1MW', 'RTP2', 'SLC38A8', 'C10ORF53', 'OR4D9', 'FMR1NB', 'P2RX3', 'ARHGAP36', 'ARR3', 'CCKBR', 'SNORA70B', 'STATH', 'CASC8', 'TBC1D28', 'C11ORF94', 'KRT39', 'OR1N1', 'C1ORF94', 'SNORA34', 'TAS2R60', 'ACTR3BP2', 'SSX8', 'HNRNPCL1', 'IFITM5', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.9488852502960334 Spearman Correlation: 0.8267688277627249 Coefficient of Determination: 0.9003779749695002 RMSE: 0.15933117834172664 NRMSE: 0.038451427068013286 MAPE: 34.50750326766078 Pearson Correlation: 0.13142572529001073 Spearman Correlation: 0.18721181062108008 Coefficient of Determination: -1.4181587833235481e+25 RMSE: 1702509113860.67 NRMSE: 694731540790.284 MAPE: 13009347375616.598 Predictor: ElasticNet Pearson Correlation: 0.8686077872170644 Spearman Correlation: 0.7287556549936502 Coefficient of Determination: 0.7412780668319013 RMSE: 0.2567672968804682 NRMSE: 0.06196570622401916 MAPE: 61.23929040413686 Pearson Correlation: 0.7858395085713675 Spearman Correlation: 0.5403832965498323 Coefficient of Determination: 0.4926608198564528 RMSE: 0.32201508522921707 NRMSE: 0.13140254844903987 MAPE: 99.8737519385266 Predictor: RandomForests Pearson Correlation: 0.8575410201855053 Spearman Correlation: 0.7167027695109632 Coefficient of Determination: 0.7303496634788526 RMSE: 0.2621341291473355 NRMSE: 0.0632608849934444 MAPE: 56.000741443297905 Pearson Correlation: 0.8425448311383597 Spearman Correlation: 0.7089048091926338 Coefficient of Determination: 0.7005862835544734 RMSE: 0.24737901837875365 NRMSE: 0.10094630636527939 MAPE: 72.12604285004788 Protein: CCND1 x_train_column_count: 885 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'DEFB109P1', 'OR8J3', 'TXLNGY', 'OR52B4', 'IFNA16', 'LINC00111', 'SNORA20', 'RAB9BP1', 'DAZL', 'OR5AN1', 'OR2T34', 'F13B', 'KRTAP19-8', 'OR11L1', 'LGALS14', 'SST', 'HBG1', 'OR2M3', 'SNORD15A', 'OTX2', 'FAM183CP', 'CLEC6A', 'OR10V1', 'NXF2B', 'TMPRSS11F', 'GPR151', 'OR8S1', 'OR2M7', 'OR5H14', 'PRM3', 'MS4A6E', 'OR8G5', 'DNAJB8', 'OR2G2', 'FGF23', 'MBD3L5', 'SCGB1C1', 'OR8B3', 'OR10A5', 'WFDC5', 'TCP10L2', 'TMEM252', 'ACOT12', 'LOC145845', 'PRSS3P2', 'PPY', 'MAGEB10', 'LINC01205', 'TAAR9', 'TSGA13', 'PLA2G2F', 'PSAPL1', 'SUN3', 'PSG7', 'CRYAA', 'USP26', 'SPRR1B', 'TTTY14', 'KRTAP10-12', 'OR1S2', 'OR2AG1', 'PRAMEF8', 'HIST1H4F', 'NPPC', 'SNORD89', 'MC2R', 'C1ORF87', 'NOX3', 'C20ORF173', 'LEUTX', 'SFTA3', 'FOXN3-AS2', 'XAGE5', 'LOC391003', 'VWC2L', 'LINC00636', 'SDR16C6P', 'FAM169B', 'LOC391343', 'ACTRT2', 'RPL13AP17', 'SLC5A7', 'ALOX12B', 'CAPZA3', 'KRTAP19-1', 'OR4S1', 'BMP10', 'OR5B2', 'TTTY15', 'OPN1MW', 'RTP2', 'SLC38A8', 'C10ORF53', 'OR4D9', 'FMR1NB', 'P2RX3', 'ARHGAP36', 'ARR3', 'CCKBR', 'SNORA70B', 'STATH', 'CASC8', 'TBC1D28', 'C11ORF94', 'KRT39', 'OR1N1', 'C1ORF94', 'SNORA34', 'TAS2R60', 'ACTR3BP2', 'SSX8', 'HNRNPCL1', 'IFITM5', 'ANKRD18DP', 'PF4', 'BEND2', 'GAGE1', 'PROKR1', 'EDDM3A', 'CABS1', 'BPIFA3', 'KHDC1L', 'LINC00029', 'MMP23A', 'DEFB129', 'OR4C16', 'AKAP14', 'CYP11B2', 'HBD', 'OR10S1', 'LINC00114', 'PRSS1', 'DEFB104A', 'HSFY2', 'CABP5', 'CYP2W1', 'CYP3A4', 'SFTPC', 'CGB5', 'CCL15-CCL14', 'DMRT1', 'RGS8', 'PROP1', 'TKTL2', 'SERPINB4', 'CLRN2', 'KCNQ1DN', 'PRAP1', 'LINC00469', 'YWHAEP7', 'SNORA51', 'KRTAP25-1', 'DUXA', 'SNORA32', 'OR4F5', 'XKR7', 'OTP', 'SNORA54', 'SLC13A1', 'LHX9', 'SVOP', 'LGI3', 'KRTAP6-1', 'PAGE2', 'LOC646813', 'MYBPHL', 'OR6Y1', 'OR4K17', 'KRTAP19-2', 'TAS2R13', 'GAGE2D', 'OR7A17', 'OR2T35', 'FBP2', 'SPACA7', 'KRTAP19-3', 'ANKUB1', 'LOC285627', 'PLET1', 'GABRG3', 'INS', 'AVPR1B', 'PRAMEF20', 'OR4K2', 'NEU2', 'MGC27382', 'FCAMR', 'TCP10', 'LCNL1', 'CRLF2', 'LINC01101', 'OTOL1', 'DNTT', 'FDCSP', 'KRT85', 'FAM71C', 'C3ORF49', 'ZFAT-AS1', 'FOXE1', 'OR6B3', 'LINC00113', 'HPD', 'C9ORF135', 'IFNA13', 'KRTAP4-5', 'OR10H2', 'IZUMO1R', 'OLIG1', 'OR1L3', 'OR8H2', 'PRDM14', 'FGF6', 'XAGE3', 'SCARNA20', 'DAW1', 'GH1', 'TCEB3C', 'CCDC166', 'TMEM207', 'UGT2A3', 'PTF1A', 'SPANXN1', 'FAM27L', 'OR14I1', 'OR8G2', 'OR1L1', 'OLAH', 'PSG11', 'DEFB108B', 'DEFA4', 'ALPPL2', 'CYLC2', 'PRKAG3', 'SNORA47', 'SPATA19', 'IL26', 'FGA', 'PRG1', 'OR51I2', 'CER1', 'LINC00923', 'BARHL2', 'KRTAP10-1', 'C17ORF78', 'SLC25A31', 'SULT1C3', 'IVL', 'NANOS2', 'LCN9', 'HBBP1', 'LCE1D', 'PYDC2', 'TFF2', 'NKX2-1', 'ZNF479', 'PISRT1', 'OR5H6', 'GYS2', 'GUCY2EP', 'FTMT', 'LINC00696', 'DEFB110', 'OPRD1', 'OR4D6', 'MYBPC2', 'EPS8L3', 'LPO', 'TARM1', 'OR7E24', 'SCGB1A1', 'UCMA', 'HOXC12', 'SCN1A', 'ENAM', 'FMO6P', 'OR1E2', 'GAGE2B', 'CPLX3', 'OR14C36', 'OR6B2', 'OR1B1', 'LOC729609', 'CLCA4', 'OR6M1', 'RESP18', 'MAGEA9B', 'ST8SIA3', 'OR1K1', 'TTTY9B', 'CYP7A1', 'GBX2', 'PRAMEF1', 'SCARNA11', 'SBSN', 'HBZ', 'HBG2', 'GPR78', 'OR4C12', 'SERPINI2', 'FRMPD2B', 'ZNF679', 'SNORA59B', 'TTTY8', 'HAO1', 'LINC00326', 'SPATA31A3', 'FAM27B', 'KRTAP21-1', 'SLC1A6', 'LINC00488', 'HTR3E', 'SLITRK3', 'OR4M2', 'MAGEB6', 'OR2M4', 'C12ORF50', 'KRTAP19-6', 'LYZL1', 'ADGRD2', 'YIPF7', 'GPRC6A', 'OR12D2', 'CCL24', 'SYCN', 'SNAR-F', 'CGB8', 'LINC00608', 'NYX', 'ANP32D', 'ASB10', 'LOC286238', 'ANGPTL3', 'TMEM88B', 'ALX4', 'ALLC', 'OR6F1', 'SNORD94', 'OC90', 'CD200R1L', 'SNORA38B', 'OR6C74', 'LMNTD1', 'OR51G2', 'GPR148', 'FAM71B', 'DPPA2', 'BRINP3', 'OR6A2', 'SLC51B', 'OR6K6', 'DYDC1', 'OR51F2', 'POU6F2', 'GDPD2', 'DKFZP434K028', 'ADGRG4', 'FFAR1', 'MAP3K15', 'KRT13', 'KRTAP2-1', 'CNBD1', 'SRY', 'NTS', 'LINC00575', 'RAX2', 'LINC00934', 'SERPINB3', 'BET1P1', 'C10ORF120', 'MOGAT3', 'SPACA3', 'IL17F', 'IL36RN', 'ARID3C', 'OR11H4', 'SLC6A5', 'CNTN5', 'TRHR', 'SNORA37', 'TSKS', 'SNORA16B', 'LOC284798', 'OR13C3', 'KCNK4', 'TCERG1L', 'GUCA2B', 'LINC00304', 'OR2A14', 'KRT25', 'KCNMB2', 'SLC2A2', 'MYH1', 'IFNA7', 'LINC00410', 'APOC3', 'TMEM179', 'HBE1', 'BMP15', 'OR2L8', 'SLC22A12', 'SNORA71A', 'KIR3DL3', 'GAGE12F', 'LINC01312', 'PRB4', 'MUSK', 'SPRR2E', 'FAM25BP', 'NLRP8', 'OR2A2', 'SPATA31C1', 'ITIH1', 'SEC14L3', 'NKAIN3', 'RPS4Y2', 'SNORA74A', 'LINC00710', 'LINC00928', 'SNORA76C', 'ZNF705A', 'DCT', 'OR2AT4', 'FAM170B', 'GPR22', 'TDRG1', 'SLC17A6', 'OR56B1', 'MAGEB3', 'PAPOLB', 'MAGEA1', 'TNP1', 'LOC100130264', 'OR11H6', 'HTR1A', 'SSX6', 'LRRC30', 'USH1C', 'CSN3', 'OR10W1', 'PROKR2', 'SPANXN3', 'USP9Y', 'CFHR2', 'SOX3', 'CTRC', 'GDNF', 'EDDM3B', 'KCNIP4-IT1', 'EPPIN', 'GKN2', 'PAGE5', 'MUC2', 'GCSAML-AS1', 'DMRTC1', 'BTN1A1', 'FAM205A', 'OR51B5', 'BCYRN1', 'DMP1', 'PPY2P', 'SCP2D1', 'ZCCHC13', 'SCARNA8', 'CHRNB3', 'LOC647859', 'HPVC1', 'SPOCK3', 'HMHB1', 'OCSTAMP', 'SPZ1', 'CRYGC', 'BPIFB3', 'ADAM29', 'ACER1', 'MAGEA12', 'PTH2', 'KRTAP4-3', 'ZFY', 'BPIFB4', 'LINC00479', 'ANKRD34C', 'GAGE2C', 'SLC32A1', 'NXPE1', 'CCKAR', 'KRTAP1-1', 'KRTAP1-5', 'TRIM48', 'ZAR1L', 'ASB15', 'FAM19A4', 'OR2T10', 'MS4A10', 'NUTM1', 'TMEM14E', 'VRTN', 'C4ORF51', 'KRT83', 'OR4F21', 'C6ORF10', 'KRT71', 'KRT3', 'C2ORF27B', 'KRTAP11-1', 'DAOA', 'KLRC4', 'HMSD', 'SOX1', 'LOC644669', 'AATK-AS1', 'ODF3', 'SPATA3', 'MMP20', 'CT47A1', 'ATOH7', 'AVP', 'AIRE', 'TPTE', 'CLEC4G', 'LINC01142', 'KCNU1', 'BTF3P11', 'FOXD4L3', 'MTVR2', 'OR2G6', 'PPP1R2P9', 'AADACL3', 'SSX9', 'RFX6', 'OR6S1', 'AFM', 'AKR1D1', 'LRRC52', 'C1ORF146', 'ZNF735', 'LOC400940', 'OACYLP', 'EPB42', 'TBR1', 'ASAP1-IT1', 'PCP4', 'B3GNT6', 'FAM170A', 'SLC22A10', 'GFI1B', 'MTNR1B', 'BTNL3', 'GNAS-AS1', 'MYH16', 'CPA2', 'LINC00303', 'IGLL1', 'HCRTR1', 'CNGA2', 'CA4', 'SH2D7', 'INSM2', 'CA6', 'CLCA1', 'HULC', 'CACNG7', 'PRR32', 'PRL', 'NF1P2', 'ZIM3', 'HYALP1', 'CT47A11', 'KRTAP3-2', 'CFHR4', 'TMEM132D', 'KCNJ16', 'USP50', 'TSPEAR-AS2', 'UGT1A4', 'PLA2G12B', 'TRIM55', 'NEUROG1', 'SSTR3', 'C11ORF87', 'SNORA72', 'DISC2', 'SERPINB11', 'NEUROD6', 'PRAMEF16', 'LINC01591', 'SNORA2B', 'PRSS48', 'GSC2', 'SNORA27', 'VWA5B1', 'OR51F1', 'OR10AD1', 'SCGB3A2', 'FERD3L', 'LINC00691', 'GABRR3', 'NKX6-2', 'RAPGEF4-AS1', 'ADRB3', 'GAGE12J', 'FAM47C', 'OR51L1', 'POM121L2', 'OR5H2', 'KRTAP12-1', 'C17ORF64', 'COX7B2', 'IFNW1', 'HIST1H3A', 'ANKRD20A20P', 'SLC10A1', 'LINC00032', 'GSTA5', 'KRTAP9-2', 'OR4D10', 'APCS', 'CGB2', 'OR5B17', 'AADAC', 'IFNL1', 'ZSCAN10', 'MMD2', 'FER1L6', 'UTS2R', 'OR51T1', 'LINC00452', 'MCF2', 'ART1', 'C12ORF56', 'OR52K2', 'MAGEA5', 'PATE3', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.153256444409575e-15 NRMSE: 7.368015003702834e-16 MAPE: 2.9508810647346856e-12 Pearson Correlation: 0.10798906410373335 Spearman Correlation: 0.06468659210214592 Coefficient of Determination: -4.318288374922927 RMSE: 0.5281106604660627 NRMSE: 0.33306676366426763 MAPE: 2184.2116870651475 Predictor: ElasticNet Pearson Correlation: 0.7044116830017639 Spearman Correlation: 0.6806244456167169 Coefficient of Determination: 0.42572813416099664 RMSE: 0.18210651057566773 NRMSE: 0.11634563229173389 MAPE: 413.68916465159754 Pearson Correlation: 0.5504607253494472 Spearman Correlation: 0.44288582151897155 Coefficient of Determination: 0.23667775856265993 RMSE: 0.20007505800117997 NRMSE: 0.12618255423888747 MAPE: 450.4761320236522 Predictor: RandomForests Pearson Correlation: 0.5454677949615393 Spearman Correlation: 0.546526785895414 Coefficient of Determination: 0.24835790183626172 RMSE: 0.20833980373168115 NRMSE: 0.13310576387452316 MAPE: 486.7335164666157 Pearson Correlation: 0.4986692741342949 Spearman Correlation: 0.46759934662526975 Coefficient of Determination: 0.21460905787738982 RMSE: 0.20294667348202194 NRMSE: 0.12799361344728932 MAPE: 480.01651618154506 Protein: ERBB2 x_train_column_count: 702 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'DEFB109P1', 'OR8J3', 'TXLNGY', 'OR52B4', 'IFNA16', 'LINC00111', 'SNORA20', 'RAB9BP1', 'DAZL', 'OR5AN1', 'OR2T34', 'F13B', 'KRTAP19-8', 'OR11L1', 'LGALS14', 'SST', 'HBG1', 'OR2M3', 'SNORD15A', 'OTX2', 'FAM183CP', 'CLEC6A', 'OR10V1', 'NXF2B', 'TMPRSS11F', 'GPR151', 'OR8S1', 'OR2M7', 'OR5H14', 'PRM3', 'MS4A6E', 'OR8G5', 'DNAJB8', 'OR2G2', 'FGF23', 'MBD3L5', 'SCGB1C1', 'OR8B3', 'OR10A5', 'WFDC5', 'TCP10L2', 'TMEM252', 'ACOT12', 'LOC145845', 'PRSS3P2', 'PPY', 'MAGEB10', 'LINC01205', 'TAAR9', 'TSGA13', 'PLA2G2F', 'PSAPL1', 'SUN3', 'PSG7', 'CRYAA', 'USP26', 'SPRR1B', 'TTTY14', 'KRTAP10-12', 'OR1S2', 'OR2AG1', 'PRAMEF8', 'HIST1H4F', 'NPPC', 'SNORD89', 'MC2R', 'C1ORF87', 'NOX3', 'C20ORF173', 'LEUTX', 'SFTA3', 'FOXN3-AS2', 'XAGE5', 'LOC391003', 'VWC2L', 'LINC00636', 'SDR16C6P', 'FAM169B', 'LOC391343', 'ACTRT2', 'RPL13AP17', 'SLC5A7', 'ALOX12B', 'CAPZA3', 'KRTAP19-1', 'OR4S1', 'BMP10', 'OR5B2', 'TTTY15', 'OPN1MW', 'RTP2', 'SLC38A8', 'C10ORF53', 'OR4D9', 'FMR1NB', 'P2RX3', 'ARHGAP36', 'ARR3', 'CCKBR', 'SNORA70B', 'STATH', 'CASC8', 'TBC1D28', 'C11ORF94', 'KRT39', 'OR1N1', 'C1ORF94', 'SNORA34', 'TAS2R60', 'ACTR3BP2', 'SSX8', 'HNRNPCL1', 'IFITM5', 'ANKRD18DP', 'PF4', 'BEND2', 'GAGE1', 'PROKR1', 'EDDM3A', 'CABS1', 'BPIFA3', 'KHDC1L', 'LINC00029', 'MMP23A', 'DEFB129', 'OR4C16', 'AKAP14', 'CYP11B2', 'HBD', 'OR10S1', 'LINC00114', 'PRSS1', 'DEFB104A', 'HSFY2', 'CABP5', 'CYP2W1', 'CYP3A4', 'SFTPC', 'CGB5', 'CCL15-CCL14', 'DMRT1', 'RGS8', 'PROP1', 'TKTL2', 'SERPINB4', 'CLRN2', 'KCNQ1DN', 'PRAP1', 'LINC00469', 'YWHAEP7', 'SNORA51', 'KRTAP25-1', 'DUXA', 'SNORA32', 'OR4F5', 'XKR7', 'OTP', 'SNORA54', 'SLC13A1', 'LHX9', 'SVOP', 'LGI3', 'KRTAP6-1', 'PAGE2', 'LOC646813', 'MYBPHL', 'OR6Y1', 'OR4K17', 'KRTAP19-2', 'TAS2R13', 'GAGE2D', 'OR7A17', 'OR2T35', 'FBP2', 'SPACA7', 'KRTAP19-3', 'ANKUB1', 'LOC285627', 'PLET1', 'GABRG3', 'INS', 'AVPR1B', 'PRAMEF20', 'OR4K2', 'NEU2', 'MGC27382', 'FCAMR', 'TCP10', 'LCNL1', 'CRLF2', 'LINC01101', 'OTOL1', 'DNTT', 'FDCSP', 'KRT85', 'FAM71C', 'C3ORF49', 'ZFAT-AS1', 'FOXE1', 'OR6B3', 'LINC00113', 'HPD', 'C9ORF135', 'IFNA13', 'KRTAP4-5', 'OR10H2', 'IZUMO1R', 'OLIG1', 'OR1L3', 'OR8H2', 'PRDM14', 'FGF6', 'XAGE3', 'SCARNA20', 'DAW1', 'GH1', 'TCEB3C', 'CCDC166', 'TMEM207', 'UGT2A3', 'PTF1A', 'SPANXN1', 'FAM27L', 'OR14I1', 'OR8G2', 'OR1L1', 'OLAH', 'PSG11', 'DEFB108B', 'DEFA4', 'ALPPL2', 'CYLC2', 'PRKAG3', 'SNORA47', 'SPATA19', 'IL26', 'FGA', 'PRG1', 'OR51I2', 'CER1', 'LINC00923', 'BARHL2', 'KRTAP10-1', 'C17ORF78', 'SLC25A31', 'SULT1C3', 'IVL', 'NANOS2', 'LCN9', 'HBBP1', 'LCE1D', 'PYDC2', 'TFF2', 'NKX2-1', 'ZNF479', 'PISRT1', 'OR5H6', 'GYS2', 'GUCY2EP', 'FTMT', 'LINC00696', 'DEFB110', 'OPRD1', 'OR4D6', 'MYBPC2', 'EPS8L3', 'LPO', 'TARM1', 'OR7E24', 'SCGB1A1', 'UCMA', 'HOXC12', 'SCN1A', 'ENAM', 'FMO6P', 'OR1E2', 'GAGE2B', 'CPLX3', 'OR14C36', 'OR6B2', 'OR1B1', 'LOC729609', 'CLCA4', 'OR6M1', 'RESP18', 'MAGEA9B', 'ST8SIA3', 'OR1K1', 'TTTY9B', 'CYP7A1', 'GBX2', 'PRAMEF1', 'SCARNA11', 'SBSN', 'HBZ', 'HBG2', 'GPR78', 'OR4C12', 'SERPINI2', 'FRMPD2B', 'ZNF679', 'SNORA59B', 'TTTY8', 'HAO1', 'LINC00326', 'SPATA31A3', 'FAM27B', 'KRTAP21-1', 'SLC1A6', 'LINC00488', 'HTR3E', 'SLITRK3', 'OR4M2', 'MAGEB6', 'OR2M4', 'C12ORF50', 'KRTAP19-6', 'LYZL1', 'ADGRD2', 'YIPF7', 'GPRC6A', 'OR12D2', 'CCL24', 'SYCN', 'SNAR-F', 'CGB8', 'LINC00608', 'NYX', 'ANP32D', 'ASB10', 'LOC286238', 'ANGPTL3', 'TMEM88B', 'ALX4', 'ALLC', 'OR6F1', 'SNORD94', 'OC90', 'CD200R1L', 'SNORA38B', 'OR6C74', 'LMNTD1', 'OR51G2', 'GPR148', 'FAM71B', 'DPPA2', 'BRINP3', 'OR6A2', 'SLC51B', 'OR6K6', 'DYDC1', 'OR51F2', 'POU6F2', 'GDPD2', 'DKFZP434K028', 'ADGRG4', 'FFAR1', 'MAP3K15', 'KRT13', 'KRTAP2-1', 'CNBD1', 'SRY', 'NTS', 'LINC00575', 'RAX2', 'LINC00934', 'SERPINB3', 'BET1P1', 'C10ORF120', 'MOGAT3', 'SPACA3', 'IL17F', 'IL36RN', 'ARID3C', 'OR11H4', 'SLC6A5', 'CNTN5', 'TRHR', 'SNORA37', 'TSKS', 'SNORA16B', 'LOC284798', 'OR13C3', 'KCNK4', 'TCERG1L', 'GUCA2B', 'LINC00304', 'OR2A14', 'KRT25', 'KCNMB2', 'SLC2A2', 'MYH1', 'IFNA7', 'LINC00410', 'APOC3', 'TMEM179', 'HBE1', 'BMP15', 'OR2L8', 'SLC22A12', 'SNORA71A', 'KIR3DL3', 'GAGE12F', 'LINC01312', 'PRB4', 'MUSK', 'SPRR2E', 'FAM25BP', 'NLRP8', 'OR2A2', 'SPATA31C1', 'ITIH1', 'SEC14L3', 'NKAIN3', 'RPS4Y2', 'SNORA74A', 'LINC00710', 'LINC00928', 'SNORA76C', 'ZNF705A', 'DCT', 'OR2AT4', 'FAM170B', 'GPR22', 'TDRG1', 'SLC17A6', 'OR56B1', 'MAGEB3', 'PAPOLB', 'MAGEA1', 'TNP1', 'LOC100130264', 'OR11H6', 'HTR1A', 'SSX6', 'LRRC30', 'USH1C', 'CSN3', 'OR10W1', 'PROKR2', 'SPANXN3', 'USP9Y', 'CFHR2', 'SOX3', 'CTRC', 'GDNF', 'EDDM3B', 'KCNIP4-IT1', 'EPPIN', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 5.170602104576315e-15 NRMSE: 8.808971675854499e-16 MAPE: 5.384869834396056e-12 Pearson Correlation: 0.3727404283453757 Spearman Correlation: 0.23883369971427149 Coefficient of Determination: -1.979251585150994 RMSE: 1.789338317164985 NRMSE: 0.3222059129839351 MAPE: 953.6272459103596 Predictor: ElasticNet Pearson Correlation: 0.9347702711224813 Spearman Correlation: 0.8733759153140243 Coefficient of Determination: 0.8582754141544311 RMSE: 0.369244565884893 NRMSE: 0.0629068889184955 MAPE: 389.8927870202106 Pearson Correlation: 0.7755122636983788 Spearman Correlation: 0.5444239260143711 Coefficient of Determination: 0.5836021590607599 RMSE: 0.6689491512200745 NRMSE: 0.12045758476250126 MAPE: 242.18802107762997 Predictor: RandomForests Pearson Correlation: 0.843651508263647 Spearman Correlation: 0.6247523106105647 Coefficient of Determination: 0.7098198773669752 RMSE: 0.5283544192188371 NRMSE: 0.09001387110394689 MAPE: 437.79323089117054 Pearson Correlation: 0.7845930635999361 Spearman Correlation: 0.6582735621872314 Coefficient of Determination: 0.5634875622647124 RMSE: 0.6849157985072024 NRMSE: 0.1233326968176617 MAPE: 218.96930999488228 Protein: ERBB3 x_train_column_count: 253 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.7652413089925142 Spearman Correlation: 0.7315175020814723 Coefficient of Determination: 0.5855935202136264 RMSE: 0.3075267604802548 NRMSE: 0.08408826461853357 MAPE: 179.9799177537033 Pearson Correlation: 0.018232767502192975 Spearman Correlation: 0.12628103377986322 Coefficient of Determination: -1.421516982133713e+27 RMSE: 14499854532270.672 NRMSE: 7136914229314.146 MAPE: 436110525240613.8 Predictor: ElasticNet Pearson Correlation: 0.6286927317750521 Spearman Correlation: 0.6182398971325024 Coefficient of Determination: 0.3730087545237868 RMSE: 0.37826867922003865 NRMSE: 0.10343150867743778 MAPE: 190.74122109196915 Pearson Correlation: 0.31845572898869107 Spearman Correlation: 0.34259030661230194 Coefficient of Determination: 0.04852384898643003 RMSE: 0.37513412499876186 NRMSE: 0.18464323684395686 MAPE: 186.43254236970404 Predictor: RandomForests Pearson Correlation: 0.5458546843220063 Spearman Correlation: 0.5400118094519417 Coefficient of Determination: 0.2848770760794782 RMSE: 0.40398012066174904 NRMSE: 0.11046189032064209 MAPE: 242.2530549212541 Pearson Correlation: 0.4164301002779678 Spearman Correlation: 0.3069679172736834 Coefficient of Determination: 0.16091326181012888 RMSE: 0.3522824821110486 NRMSE: 0.1733955229496171 MAPE: 246.9650122209046 Fold: 5 Protein: RB1 x_train_column_count: 379 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'BTNL3', 'F9', 'FAM183CP', 'LINC00111', 'KCNU1', 'LOC727924', 'CXORF51A', 'OR2M3', 'OR10T2', 'OR1S1', 'SOX1', 'SNORD15A', 'HBG1', 'OR10V1', 'FGF23', 'MS4A6E', 'WFDC5', 'GPR151', 'PRM3', 'SCGB1C1', 'CLEC6A', 'PRSS3P2', 'ASAP1-IT1', 'PPY', 'DNAJB8', 'CT47A11', 'TMEM252', 'OR10A5', 'MAGEB10', 'OR8S1', 'PSG7', 'SUN3', 'SPRR1B', 'PRAMEF8', 'CELA2B', 'PLA2G2F', 'CRYAA', 'KLHL40', 'OR2AG1', 'MC2R', 'USP26', 'HIST1H4F', 'DMBT1P1', 'OR8G5', 'OR10K1', 'NPPC', 'PSAPL1', 'SNORD89', 'SLC5A7', 'C1ORF87', 'ALOX12B', 'TUSC7', 'HBBP1', 'LOC391003', 'C15ORF43', 'SFTA3', 'CAPZA3', 'XAGE5', 'LOC391343', 'LINC00636', 'TBC1D28', 'KRT39', 'C20ORF173', 'C22ORF42', 'BMP10', 'SNORA34', 'IFITM5', 'SNORA70B', 'OR4S1', 'PIWIL3', 'C4ORF51', 'TAS2R60', 'CCKBR', 'OR5B2', 'CASC8', 'IQCF2', 'ARR3', 'KRTAP19-1', 'PROKR1', 'FMR1NB', 'NXF2B', 'ARHGAP36', 'P2RX3', 'TTTY15', 'OPN1MW', 'PPBPP1', 'CHODL-AS1', 'PF4', 'KHDC1L', 'LYZL6', 'TEX33', 'OR1B1', 'HBD', 'FAM153C', 'TKTL2', 'ANKRD18DP', 'MYBPHL', 'AKAP14', 'EDDM3A', 'SYT10', 'ACOT12', 'GAGE1', 'C11ORF94', 'CSH2', 'SERPINB4', 'BRDTP1', 'LGI3', 'PRB1', 'SNORA54', 'PRAP1', 'SNORA51', 'OR10S1', 'SFTPC', 'OTP', 'IGF2BP2-AS1', 'SPACA7', 'KCNQ1DN', 'DMRT1', 'YWHAEP7', 'CYP3A4', 'PRSS1', 'ZAR1L', 'C17ORF64', 'GAGE2D', 'FBP2', 'IFNA13', 'KRTAP19-3', 'SLC13A1', 'LHX9', 'CYP2W1', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.8341993200180651 Spearman Correlation: 0.7485961755744572 Coefficient of Determination: 0.6958713051347339 RMSE: 0.12899364738660796 NRMSE: 0.06372479776834053 MAPE: 285.3784171429158 Pearson Correlation: 0.020907234248521638 Spearman Correlation: -0.11830820833177472 Coefficient of Determination: -4.850249827570435e+25 RMSE: 1674023075700.2727 NRMSE: 844050922544.1547 MAPE: 546082500866997.6 Predictor: ElasticNet Pearson Correlation: 0.5739137072869047 Spearman Correlation: 0.4235186780423935 Coefficient of Determination: 0.28041941130191494 RMSE: 0.19841721222979258 NRMSE: 0.09802108072194986 MAPE: 164.76592547333345 Pearson Correlation: 0.09501327666447162 Spearman Correlation: 0.21662863626728512 Coefficient of Determination: -0.20248172374406992 RMSE: 0.26358374732877654 NRMSE: 0.13290026184820228 MAPE: 541.3658216040079 Predictor: RandomForests Pearson Correlation: 0.5619478702017143 Spearman Correlation: 0.4619434304304732 Coefficient of Determination: 0.17751678896055556 RMSE: 0.21213051417449674 NRMSE: 0.10479565769428213 MAPE: 120.45109933230103 Pearson Correlation: 0.1812092369004648 Spearman Correlation: 0.24415297466692462 Coefficient of Determination: -0.07720420047693222 RMSE: 0.24947578906999623 NRMSE: 0.12578695776273938 MAPE: 143.14524014735238 Protein: CDH1 x_train_column_count: 862 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'BTNL3', 'F9', 'FAM183CP', 'LINC00111', 'KCNU1', 'LOC727924', 'CXORF51A', 'OR2M3', 'OR10T2', 'OR1S1', 'SOX1', 'SNORD15A', 'HBG1', 'OR10V1', 'FGF23', 'MS4A6E', 'WFDC5', 'GPR151', 'PRM3', 'SCGB1C1', 'CLEC6A', 'PRSS3P2', 'ASAP1-IT1', 'PPY', 'DNAJB8', 'CT47A11', 'TMEM252', 'OR10A5', 'MAGEB10', 'OR8S1', 'PSG7', 'SUN3', 'SPRR1B', 'PRAMEF8', 'CELA2B', 'PLA2G2F', 'CRYAA', 'KLHL40', 'OR2AG1', 'MC2R', 'USP26', 'HIST1H4F', 'DMBT1P1', 'OR8G5', 'OR10K1', 'NPPC', 'PSAPL1', 'SNORD89', 'SLC5A7', 'C1ORF87', 'ALOX12B', 'TUSC7', 'HBBP1', 'LOC391003', 'C15ORF43', 'SFTA3', 'CAPZA3', 'XAGE5', 'LOC391343', 'LINC00636', 'TBC1D28', 'KRT39', 'C20ORF173', 'C22ORF42', 'BMP10', 'SNORA34', 'IFITM5', 'SNORA70B', 'OR4S1', 'PIWIL3', 'C4ORF51', 'TAS2R60', 'CCKBR', 'OR5B2', 'CASC8', 'IQCF2', 'ARR3', 'KRTAP19-1', 'PROKR1', 'FMR1NB', 'NXF2B', 'ARHGAP36', 'P2RX3', 'TTTY15', 'OPN1MW', 'PPBPP1', 'CHODL-AS1', 'PF4', 'KHDC1L', 'LYZL6', 'TEX33', 'OR1B1', 'HBD', 'FAM153C', 'TKTL2', 'ANKRD18DP', 'MYBPHL', 'AKAP14', 'EDDM3A', 'SYT10', 'ACOT12', 'GAGE1', 'C11ORF94', 'CSH2', 'SERPINB4', 'BRDTP1', 'LGI3', 'PRB1', 'SNORA54', 'PRAP1', 'SNORA51', 'OR10S1', 'SFTPC', 'OTP', 'IGF2BP2-AS1', 'SPACA7', 'KCNQ1DN', 'DMRT1', 'YWHAEP7', 'CYP3A4', 'PRSS1', 'ZAR1L', 'C17ORF64', 'GAGE2D', 'FBP2', 'IFNA13', 'KRTAP19-3', 'SLC13A1', 'LHX9', 'CYP2W1', 'LINC00469', 'LOC646813', 'FOXE1', 'C9ORF135', 'OR4K2', 'OTOL1', 'HPD', 'OLIG1', 'PLET1', 'LCNL1', 'CRLF2', 'NEU2', 'GABRG3', 'FCAMR', 'CCDC166', 'SVOP', 'FERD3L', 'FDCSP', 'HAND1', 'NPHS2', 'GH1', 'FAM71C', 'C3ORF49', 'USP17L6P', 'XKR7', 'LINC01101', 'FAM27L', 'VRTN', 'SATB2-AS1', 'SCARNA20', 'CNTNAP5', 'ZFAT-AS1', 'ACSM2A', 'OLAH', 'PTF1A', 'C17ORF78', 'PRDM14', 'HOXC12', 'DNAJC5G', 'LCE1D', 'FMO6P', 'PISRT1', 'TMEM207', 'LINC00696', 'GDNF', 'OR13H1', 'CRNN', 'OR51I2', 'AVPR1B', 'CLDN22', 'SPANXN1', 'ZNF479', 'OR5H6', 'LPO', 'FGA', 'OR6M1', 'PRKAG3', 'OR4D6', 'OR7E24', 'CELA2A', 'IL26', 'HFE2', 'UCMA', 'SCGB1A1', 'OR1L1', 'PWRN2', 'SCN1A', 'MYBPC2', 'FTMT', 'BARHL2', 'OPRD1', 'GYS2', 'IVL', 'OR1K1', 'DEFB110', 'ADAM18', 'EPS8L3', 'CCKAR', 'LOC285627', 'HBZ', 'SLC1A6', 'KRTAP21-1', 'CER1', 'SBSN', 'GABRA6', 'LOC729609', 'PRG1', 'SERPINI2', 'CPLX3', 'FAM27B', 'LMNTD1', 'TFF2', 'CT45A1', 'OR4C12', 'OR4D2', 'SCARNA11', 'POM121L2', 'OR56B1', 'NKX2-1', 'CLCA4', 'HBG2', 'LINC00488', 'SNORA59B', 'OR8D4', 'CYP7A1', 'FOXN3-AS2', 'GBX2', 'GAGE2B', 'LINC00608', 'CGB8', 'OR2M4', 'OR52A4P', 'DRGX', 'HTR3E', 'SNORA38B', 'ANP32D', 'LYZL1', 'CCL24', 'HTR5A', 'SLITRK3', 'YIPF7', 'TSPY1', 'SLC25A31', 'RAX', 'ALLC', 'SYCN', 'SNORA44', 'TARM1', 'HMHB1', 'SLC35G3', 'TMEM88B', 'OR6C74', 'ALX4', 'SPACA3', 'LINC00923', 'A1CF', 'OR6F1', 'CD200R1L', 'SLC51B', 'TSPY2', 'FRMPD2B', 'OR9A2', 'KRT13', 'SNORD94', 'TSKS', 'OR8J3', 'NPBWR2', 'ARL5C', 'OR2T29', 'DYDC1', 'GDPD2', 'ARID3C', 'LINC00602', 'NKX2-6', 'LINC00934', 'OR11H4', 'GOLGA8EP', 'OR13C3', 'PLG', 'TRHR', 'LINC00895', 'MAP3K15', 'MAGEA9B', 'ITLN2', 'POU6F2', 'SRY', 'RAX2', 'OR1N1', 'LINC00575', 'SSX5', 'SNORA37', 'TPTE2', 'CNTN5', 'TCERG1L', 'DPPA2', 'NTS', 'ADGRG4', 'ZIM3', 'BMP15', 'ZCCHC13', 'POTED', 'MUSK', 'SNORA71A', 'KIR3DL3', 'LINC00304', 'KCNK4', 'GRIN2B', 'APOC3', 'IQCF3', 'C2ORF83', 'MYH1', 'C18ORF42', 'TRPM1', 'GPR22', 'IL36RN', 'ALPPL2', 'GAGE2C', 'GAGE12F', 'KCNMB2', 'SNORD116-19', 'TPD52L3', 'OR2L8', 'C20ORF166-AS1', 'NLRP8', 'SNORA74A', 'SNORA76C', 'OR2A14', 'OR4F15', 'CFHR4', 'OR2AT4', 'OR11H6', 'SPANXN3', 'CPLX4', 'SOX3', 'FAM170B', 'DAOA', 'CYP2C18', 'LINC01312', 'CSN3', 'EDDM3B', 'GUCA2B', 'ITIH1', 'USH1C', 'F13B', 'ZNF705A', 'FFAR1', 'GPR52', 'SYCP1', 'ARSF', 'EPPIN', 'DNMT3L', 'PRAMEF14', 'MUC2', 'MTVR2', 'LRRC30', 'SPATA31C1', 'MAGEA1', 'ADAM29', 'TRIM48', 'OR52N5', 'CXADRP2', 'BPIFB3', 'DUSP21', 'OR2T10', 'FAM205A', 'SLC32A1', 'DMP1', 'FOXD4L3', 'PPIAL4E', 'MMP23A', 'PSKH2', 'BTN1A1', 'OR5C1', 'C6ORF10', 'ACER1', 'NKAIN3', 'AATK-AS1', 'SPINK1', 'IFNA14', 'MORC1', 'TRIM75P', 'LOC647859', 'TTTY2', 'TMIGD1', 'SPOCK3', 'CHRNB3', 'BET1P1', 'GCSAML-AS1', 'CSNK1A1P1', 'OR2A2', 'SCARNA8', 'FAM19A4', 'ADGRG7', 'KRTAP4-3', 'OR9G4', 'TMEM72', 'CRYGC', 'PAGE5', 'ODAM', 'OR1S2', 'KRTAP1-5', 'REC114', 'KRTAP1-1', 'TREML4', 'IQCF6', 'TMEM14E', 'KRTAP12-2', 'PPY2P', 'ZFY', 'TSPAN19', 'IQCJ', 'KRT83', 'RFX6', 'PLA2G12B', 'DMRTC1', 'SNORD115-26', 'OR6C4', 'COL6A4P1', 'DCT', 'VWC2L', 'SH2D7', 'HCRTR1', 'NUTM1', 'OR52A5', 'KRT3', 'TPTE', 'REG4', 'AADACL3', 'OR2G6', 'CT47A1', 'CLEC4G', 'OR6S1', 'SNORA16B', 'CGB5', 'BTF3P11', 'SPATA3', 'MAGEA5', 'LINC01020', 'SPDYC', 'KLRC4', 'S100G', 'KRTAP11-1', 'RAPGEF4-AS1', 'LOC400736', 'NF1P2', 'NXPE1', 'KRT85', 'FRMPD4', 'TSGA13', 'RPE65', 'TRPV5', 'LOC100129935', 'ANKRD34C', 'EPB42', 'CA6', 'OR2F1', 'APCS', 'CHIAP2', 'FOXG1', 'KCNJ16', 'ASB15', 'IHH', 'AKR1D1', 'OACYLP', 'GNAS-AS1', 'KRT74', 'KRTAP3-2', 'LOC400940', 'SDR16C6P', 'B3GNT6', 'IFNL1', 'PCGEM1', 'MAGEA12', 'POTEH', 'COX7B2', 'TCP10L2', 'CPA2', 'LINC00303', 'C2ORF27B', 'MAGEB3', 'PCP4', 'DEFB126', 'GFI1B', 'CTRB1', 'C1ORF146', 'UGT1A4', 'CNGA2', 'SLC22A10', 'DISC2', 'SPANXA2', 'INSM2', 'MTNR1B', 'LY6G6D', 'C15ORF32', 'TSPEAR-AS2', 'PRR32', 'TMPRSS11F', 'PRSS48', 'FAM24A', 'GABRR3', 'OR2A12', 'GML', 'TMEM132D', 'LINC00113', 'RNASE8', 'HIST2H2AB', 'ZSCAN10', 'LINC01591', 'NKX6-2', 'ABRA', 'GLTPD2', 'SNORA72', 'OR6B1', 'WFDC8', 'FBXW12', 'LINC00691', 'MOS', 'LOC284661', 'TRIM55', 'LINC01142', 'OR4A16', 'RBM46', 'TLX3', 'HYPM', 'TAAR9', 'OR4D10', 'CNTNAP4', 'CABS1', 'PRAMEF16', 'VWA5B1', 'CRYGB', 'SNORA2B', 'LINC00452', 'GCG', 'SNORA27', 'CFC1B', 'SCGB3A2', 'PRAMEF5', 'FAM170A', 'OR51T1', 'CGB2', 'GSC2', 'HIST1H3A', 'CCK', 'LRRTM1', 'AGXT2', 'ADRB3', 'AIRE', 'GSTA5', 'OR4D5', 'OR10AD1', 'DUXA', 'MCF2', 'KRTAP12-1', 'MS4A10', 'RPL3L', 'LOC643923', 'AADAC', 'DEFB123', 'OR5B17', 'SERPINB3', 'ANKRD20A20P', 'SNCB', 'MYF5', 'HMSD', 'MT1B', 'CST9L', 'EPGN', 'ZG16', 'SNORD15B', 'TRIM15', 'RHAG', 'GABRB1', 'CLRN1', 'TBC1D3P2', 'ART1', 'OR4D1', 'PRLHR', 'KRTAP10-11', 'GRK1', 'HYMAI', 'MYADML', 'BANF2', 'USP50', 'B3GALT1', 'NPSR1-AS1', 'HRK', 'INS-IGF2', 'NHLH2', 'PABPC1L2A', 'SLC5A2', 'FAM47C', 'TRIM49', 'OR5T2', 'CEACAM22P', 'AQP2', 'MMD2', 'APOA5', 'PACRG-AS1', 'UTS2R', 'PRSS57', 'LINC00523', 'SPINK14', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 5.63073248402896e-15 NRMSE: 8.965848992116428e-16 MAPE: 2.884406460104315e-12 Pearson Correlation: 0.15282719686347096 Spearman Correlation: 0.14335091459993268 Coefficient of Determination: -2.591090162411753 RMSE: 2.201532021468415 NRMSE: 0.4329378028885204 MAPE: 2372.60826395797 Predictor: ElasticNet Pearson Correlation: 0.9062556760883894 Spearman Correlation: 0.8757772250860956 Coefficient of Determination: 0.7952167253550019 RMSE: 0.5095815631543961 NRMSE: 0.08114097690430178 MAPE: 138.38629498686348 Pearson Correlation: 0.46360116458907785 Spearman Correlation: 0.5120886794099677 Coefficient of Determination: 0.1907279600362256 RMSE: 1.0451030617610326 NRMSE: 0.2055226174039906 MAPE: 965.1198086227507 Predictor: RandomForests Pearson Correlation: 0.775229775259976 Spearman Correlation: 0.6837210778073392 Coefficient of Determination: 0.5967478252303777 RMSE: 0.7150803171538865 NRMSE: 0.11386266634086278 MAPE: 136.23234083553996 Pearson Correlation: 0.6274030294059526 Spearman Correlation: 0.525729476756449 Coefficient of Determination: 0.3826609722985752 RMSE: 0.9127959802724861 NRMSE: 0.17950403733898765 MAPE: 450.4658343048412 Protein: CDH2 x_train_column_count: 487 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'BTNL3', 'F9', 'FAM183CP', 'LINC00111', 'KCNU1', 'LOC727924', 'CXORF51A', 'OR2M3', 'OR10T2', 'OR1S1', 'SOX1', 'SNORD15A', 'HBG1', 'OR10V1', 'FGF23', 'MS4A6E', 'WFDC5', 'GPR151', 'PRM3', 'SCGB1C1', 'CLEC6A', 'PRSS3P2', 'ASAP1-IT1', 'PPY', 'DNAJB8', 'CT47A11', 'TMEM252', 'OR10A5', 'MAGEB10', 'OR8S1', 'PSG7', 'SUN3', 'SPRR1B', 'PRAMEF8', 'CELA2B', 'PLA2G2F', 'CRYAA', 'KLHL40', 'OR2AG1', 'MC2R', 'USP26', 'HIST1H4F', 'DMBT1P1', 'OR8G5', 'OR10K1', 'NPPC', 'PSAPL1', 'SNORD89', 'SLC5A7', 'C1ORF87', 'ALOX12B', 'TUSC7', 'HBBP1', 'LOC391003', 'C15ORF43', 'SFTA3', 'CAPZA3', 'XAGE5', 'LOC391343', 'LINC00636', 'TBC1D28', 'KRT39', 'C20ORF173', 'C22ORF42', 'BMP10', 'SNORA34', 'IFITM5', 'SNORA70B', 'OR4S1', 'PIWIL3', 'C4ORF51', 'TAS2R60', 'CCKBR', 'OR5B2', 'CASC8', 'IQCF2', 'ARR3', 'KRTAP19-1', 'PROKR1', 'FMR1NB', 'NXF2B', 'ARHGAP36', 'P2RX3', 'TTTY15', 'OPN1MW', 'PPBPP1', 'CHODL-AS1', 'PF4', 'KHDC1L', 'LYZL6', 'TEX33', 'OR1B1', 'HBD', 'FAM153C', 'TKTL2', 'ANKRD18DP', 'MYBPHL', 'AKAP14', 'EDDM3A', 'SYT10', 'ACOT12', 'GAGE1', 'C11ORF94', 'CSH2', 'SERPINB4', 'BRDTP1', 'LGI3', 'PRB1', 'SNORA54', 'PRAP1', 'SNORA51', 'OR10S1', 'SFTPC', 'OTP', 'IGF2BP2-AS1', 'SPACA7', 'KCNQ1DN', 'DMRT1', 'YWHAEP7', 'CYP3A4', 'PRSS1', 'ZAR1L', 'C17ORF64', 'GAGE2D', 'FBP2', 'IFNA13', 'KRTAP19-3', 'SLC13A1', 'LHX9', 'CYP2W1', 'LINC00469', 'LOC646813', 'FOXE1', 'C9ORF135', 'OR4K2', 'OTOL1', 'HPD', 'OLIG1', 'PLET1', 'LCNL1', 'CRLF2', 'NEU2', 'GABRG3', 'FCAMR', 'CCDC166', 'SVOP', 'FERD3L', 'FDCSP', 'HAND1', 'NPHS2', 'GH1', 'FAM71C', 'C3ORF49', 'USP17L6P', 'XKR7', 'LINC01101', 'FAM27L', 'VRTN', 'SATB2-AS1', 'SCARNA20', 'CNTNAP5', 'ZFAT-AS1', 'ACSM2A', 'OLAH', 'PTF1A', 'C17ORF78', 'PRDM14', 'HOXC12', 'DNAJC5G', 'LCE1D', 'FMO6P', 'PISRT1', 'TMEM207', 'LINC00696', 'GDNF', 'OR13H1', 'CRNN', 'OR51I2', 'AVPR1B', 'CLDN22', 'SPANXN1', 'ZNF479', 'OR5H6', 'LPO', 'FGA', 'OR6M1', 'PRKAG3', 'OR4D6', 'OR7E24', 'CELA2A', 'IL26', 'HFE2', 'UCMA', 'SCGB1A1', 'OR1L1', 'PWRN2', 'SCN1A', 'MYBPC2', 'FTMT', 'BARHL2', 'OPRD1', 'GYS2', 'IVL', 'OR1K1', 'DEFB110', 'ADAM18', 'EPS8L3', 'CCKAR', 'LOC285627', 'HBZ', 'SLC1A6', 'KRTAP21-1', 'CER1', 'SBSN', 'GABRA6', 'LOC729609', 'PRG1', 'SERPINI2', 'CPLX3', 'FAM27B', 'LMNTD1', 'TFF2', 'CT45A1', 'OR4C12', 'OR4D2', 'SCARNA11', 'POM121L2', 'OR56B1', 'NKX2-1', 'CLCA4', 'HBG2', 'LINC00488', 'SNORA59B', 'OR8D4', 'CYP7A1', 'FOXN3-AS2', 'GBX2', 'GAGE2B', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.938984664695915 Spearman Correlation: 0.9173397997987575 Coefficient of Determination: 0.8801269340357167 RMSE: 0.12434268459525362 NRMSE: 0.061069046017019596 MAPE: 180.7653356797936 Pearson Correlation: 0.10818452018914587 Spearman Correlation: 0.003438949910786986 Coefficient of Determination: -3.734136375842569e+26 RMSE: 8059841546093.397 NRMSE: 3013982591138.641 MAPE: 118620076511277.48 Predictor: ElasticNet Pearson Correlation: 0.7340573951571691 Spearman Correlation: 0.6824020817628902 Coefficient of Determination: 0.46139757341703935 RMSE: 0.2635685491110771 NRMSE: 0.129447742798034 MAPE: 363.18238798812035 Pearson Correlation: 0.1846669172060297 Spearman Correlation: 0.17850868278755855 Coefficient of Determination: -0.02332119886236561 RMSE: 0.4219270817180395 NRMSE: 0.15777988583962735 MAPE: 835.893636984675 Predictor: RandomForests Pearson Correlation: 0.6065449369017719 Spearman Correlation: 0.49878407007147085 Coefficient of Determination: 0.139097367782406 RMSE: 0.33322413622078373 NRMSE: 0.16365804047973267 MAPE: 418.1264994772313 Pearson Correlation: 0.07193293017047774 Spearman Correlation: 0.11098669805533247 Coefficient of Determination: -0.00966421703770548 RMSE: 0.41910215967006004 NRMSE: 0.1567235045416525 MAPE: 278.47852611872486 Protein: CDH3 x_train_column_count: 82 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.44467787283148497 Spearman Correlation: 0.4771317625827549 Coefficient of Determination: 0.19713745508486602 RMSE: 0.18258123165050055 NRMSE: 0.12809481930915737 MAPE: 376.61396164230626 Pearson Correlation: 0.0671969185584296 Spearman Correlation: 0.3310889163206524 Coefficient of Determination: -0.6422276358673782 RMSE: 0.28627575720193 NRMSE: 0.258280710942836 MAPE: 181.0328501326582 Predictor: ElasticNet Pearson Correlation: 0.3578628679368281 Spearman Correlation: 0.39072870966348006 Coefficient of Determination: 0.11578265715265146 RMSE: 0.19160862217449795 NRMSE: 0.1344282301836013 MAPE: 257.5291696626051 Pearson Correlation: 0.25623958472829444 Spearman Correlation: 0.2831681193032332 Coefficient of Determination: 0.05697116163283167 RMSE: 0.21693537699081852 NRMSE: 0.19572116041358956 MAPE: 114.35765131032906 Predictor: RandomForests Pearson Correlation: 0.4468818008105274 Spearman Correlation: 0.4630385305722384 Coefficient of Determination: 0.18149516924195652 RMSE: 0.18435127984512578 NRMSE: 0.1293366446688035 MAPE: 463.258906046624 Pearson Correlation: 0.3718163223653611 Spearman Correlation: 0.3787321645015605 Coefficient of Determination: 0.12182966380435445 RMSE: 0.20934243690664417 NRMSE: 0.1888707376524907 MAPE: 143.33759385535018 Protein: PTEN x_train_column_count: 947 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'BTNL3', 'F9', 'FAM183CP', 'LINC00111', 'KCNU1', 'LOC727924', 'CXORF51A', 'OR2M3', 'OR10T2', 'OR1S1', 'SOX1', 'SNORD15A', 'HBG1', 'OR10V1', 'FGF23', 'MS4A6E', 'WFDC5', 'GPR151', 'PRM3', 'SCGB1C1', 'CLEC6A', 'PRSS3P2', 'ASAP1-IT1', 'PPY', 'DNAJB8', 'CT47A11', 'TMEM252', 'OR10A5', 'MAGEB10', 'OR8S1', 'PSG7', 'SUN3', 'SPRR1B', 'PRAMEF8', 'CELA2B', 'PLA2G2F', 'CRYAA', 'KLHL40', 'OR2AG1', 'MC2R', 'USP26', 'HIST1H4F', 'DMBT1P1', 'OR8G5', 'OR10K1', 'NPPC', 'PSAPL1', 'SNORD89', 'SLC5A7', 'C1ORF87', 'ALOX12B', 'TUSC7', 'HBBP1', 'LOC391003', 'C15ORF43', 'SFTA3', 'CAPZA3', 'XAGE5', 'LOC391343', 'LINC00636', 'TBC1D28', 'KRT39', 'C20ORF173', 'C22ORF42', 'BMP10', 'SNORA34', 'IFITM5', 'SNORA70B', 'OR4S1', 'PIWIL3', 'C4ORF51', 'TAS2R60', 'CCKBR', 'OR5B2', 'CASC8', 'IQCF2', 'ARR3', 'KRTAP19-1', 'PROKR1', 'FMR1NB', 'NXF2B', 'ARHGAP36', 'P2RX3', 'TTTY15', 'OPN1MW', 'PPBPP1', 'CHODL-AS1', 'PF4', 'KHDC1L', 'LYZL6', 'TEX33', 'OR1B1', 'HBD', 'FAM153C', 'TKTL2', 'ANKRD18DP', 'MYBPHL', 'AKAP14', 'EDDM3A', 'SYT10', 'ACOT12', 'GAGE1', 'C11ORF94', 'CSH2', 'SERPINB4', 'BRDTP1', 'LGI3', 'PRB1', 'SNORA54', 'PRAP1', 'SNORA51', 'OR10S1', 'SFTPC', 'OTP', 'IGF2BP2-AS1', 'SPACA7', 'KCNQ1DN', 'DMRT1', 'YWHAEP7', 'CYP3A4', 'PRSS1', 'ZAR1L', 'C17ORF64', 'GAGE2D', 'FBP2', 'IFNA13', 'KRTAP19-3', 'SLC13A1', 'LHX9', 'CYP2W1', 'LINC00469', 'LOC646813', 'FOXE1', 'C9ORF135', 'OR4K2', 'OTOL1', 'HPD', 'OLIG1', 'PLET1', 'LCNL1', 'CRLF2', 'NEU2', 'GABRG3', 'FCAMR', 'CCDC166', 'SVOP', 'FERD3L', 'FDCSP', 'HAND1', 'NPHS2', 'GH1', 'FAM71C', 'C3ORF49', 'USP17L6P', 'XKR7', 'LINC01101', 'FAM27L', 'VRTN', 'SATB2-AS1', 'SCARNA20', 'CNTNAP5', 'ZFAT-AS1', 'ACSM2A', 'OLAH', 'PTF1A', 'C17ORF78', 'PRDM14', 'HOXC12', 'DNAJC5G', 'LCE1D', 'FMO6P', 'PISRT1', 'TMEM207', 'LINC00696', 'GDNF', 'OR13H1', 'CRNN', 'OR51I2', 'AVPR1B', 'CLDN22', 'SPANXN1', 'ZNF479', 'OR5H6', 'LPO', 'FGA', 'OR6M1', 'PRKAG3', 'OR4D6', 'OR7E24', 'CELA2A', 'IL26', 'HFE2', 'UCMA', 'SCGB1A1', 'OR1L1', 'PWRN2', 'SCN1A', 'MYBPC2', 'FTMT', 'BARHL2', 'OPRD1', 'GYS2', 'IVL', 'OR1K1', 'DEFB110', 'ADAM18', 'EPS8L3', 'CCKAR', 'LOC285627', 'HBZ', 'SLC1A6', 'KRTAP21-1', 'CER1', 'SBSN', 'GABRA6', 'LOC729609', 'PRG1', 'SERPINI2', 'CPLX3', 'FAM27B', 'LMNTD1', 'TFF2', 'CT45A1', 'OR4C12', 'OR4D2', 'SCARNA11', 'POM121L2', 'OR56B1', 'NKX2-1', 'CLCA4', 'HBG2', 'LINC00488', 'SNORA59B', 'OR8D4', 'CYP7A1', 'FOXN3-AS2', 'GBX2', 'GAGE2B', 'LINC00608', 'CGB8', 'OR2M4', 'OR52A4P', 'DRGX', 'HTR3E', 'SNORA38B', 'ANP32D', 'LYZL1', 'CCL24', 'HTR5A', 'SLITRK3', 'YIPF7', 'TSPY1', 'SLC25A31', 'RAX', 'ALLC', 'SYCN', 'SNORA44', 'TARM1', 'HMHB1', 'SLC35G3', 'TMEM88B', 'OR6C74', 'ALX4', 'SPACA3', 'LINC00923', 'A1CF', 'OR6F1', 'CD200R1L', 'SLC51B', 'TSPY2', 'FRMPD2B', 'OR9A2', 'KRT13', 'SNORD94', 'TSKS', 'OR8J3', 'NPBWR2', 'ARL5C', 'OR2T29', 'DYDC1', 'GDPD2', 'ARID3C', 'LINC00602', 'NKX2-6', 'LINC00934', 'OR11H4', 'GOLGA8EP', 'OR13C3', 'PLG', 'TRHR', 'LINC00895', 'MAP3K15', 'MAGEA9B', 'ITLN2', 'POU6F2', 'SRY', 'RAX2', 'OR1N1', 'LINC00575', 'SSX5', 'SNORA37', 'TPTE2', 'CNTN5', 'TCERG1L', 'DPPA2', 'NTS', 'ADGRG4', 'ZIM3', 'BMP15', 'ZCCHC13', 'POTED', 'MUSK', 'SNORA71A', 'KIR3DL3', 'LINC00304', 'KCNK4', 'GRIN2B', 'APOC3', 'IQCF3', 'C2ORF83', 'MYH1', 'C18ORF42', 'TRPM1', 'GPR22', 'IL36RN', 'ALPPL2', 'GAGE2C', 'GAGE12F', 'KCNMB2', 'SNORD116-19', 'TPD52L3', 'OR2L8', 'C20ORF166-AS1', 'NLRP8', 'SNORA74A', 'SNORA76C', 'OR2A14', 'OR4F15', 'CFHR4', 'OR2AT4', 'OR11H6', 'SPANXN3', 'CPLX4', 'SOX3', 'FAM170B', 'DAOA', 'CYP2C18', 'LINC01312', 'CSN3', 'EDDM3B', 'GUCA2B', 'ITIH1', 'USH1C', 'F13B', 'ZNF705A', 'FFAR1', 'GPR52', 'SYCP1', 'ARSF', 'EPPIN', 'DNMT3L', 'PRAMEF14', 'MUC2', 'MTVR2', 'LRRC30', 'SPATA31C1', 'MAGEA1', 'ADAM29', 'TRIM48', 'OR52N5', 'CXADRP2', 'BPIFB3', 'DUSP21', 'OR2T10', 'FAM205A', 'SLC32A1', 'DMP1', 'FOXD4L3', 'PPIAL4E', 'MMP23A', 'PSKH2', 'BTN1A1', 'OR5C1', 'C6ORF10', 'ACER1', 'NKAIN3', 'AATK-AS1', 'SPINK1', 'IFNA14', 'MORC1', 'TRIM75P', 'LOC647859', 'TTTY2', 'TMIGD1', 'SPOCK3', 'CHRNB3', 'BET1P1', 'GCSAML-AS1', 'CSNK1A1P1', 'OR2A2', 'SCARNA8', 'FAM19A4', 'ADGRG7', 'KRTAP4-3', 'OR9G4', 'TMEM72', 'CRYGC', 'PAGE5', 'ODAM', 'OR1S2', 'KRTAP1-5', 'REC114', 'KRTAP1-1', 'TREML4', 'IQCF6', 'TMEM14E', 'KRTAP12-2', 'PPY2P', 'ZFY', 'TSPAN19', 'IQCJ', 'KRT83', 'RFX6', 'PLA2G12B', 'DMRTC1', 'SNORD115-26', 'OR6C4', 'COL6A4P1', 'DCT', 'VWC2L', 'SH2D7', 'HCRTR1', 'NUTM1', 'OR52A5', 'KRT3', 'TPTE', 'REG4', 'AADACL3', 'OR2G6', 'CT47A1', 'CLEC4G', 'OR6S1', 'SNORA16B', 'CGB5', 'BTF3P11', 'SPATA3', 'MAGEA5', 'LINC01020', 'SPDYC', 'KLRC4', 'S100G', 'KRTAP11-1', 'RAPGEF4-AS1', 'LOC400736', 'NF1P2', 'NXPE1', 'KRT85', 'FRMPD4', 'TSGA13', 'RPE65', 'TRPV5', 'LOC100129935', 'ANKRD34C', 'EPB42', 'CA6', 'OR2F1', 'APCS', 'CHIAP2', 'FOXG1', 'KCNJ16', 'ASB15', 'IHH', 'AKR1D1', 'OACYLP', 'GNAS-AS1', 'KRT74', 'KRTAP3-2', 'LOC400940', 'SDR16C6P', 'B3GNT6', 'IFNL1', 'PCGEM1', 'MAGEA12', 'POTEH', 'COX7B2', 'TCP10L2', 'CPA2', 'LINC00303', 'C2ORF27B', 'MAGEB3', 'PCP4', 'DEFB126', 'GFI1B', 'CTRB1', 'C1ORF146', 'UGT1A4', 'CNGA2', 'SLC22A10', 'DISC2', 'SPANXA2', 'INSM2', 'MTNR1B', 'LY6G6D', 'C15ORF32', 'TSPEAR-AS2', 'PRR32', 'TMPRSS11F', 'PRSS48', 'FAM24A', 'GABRR3', 'OR2A12', 'GML', 'TMEM132D', 'LINC00113', 'RNASE8', 'HIST2H2AB', 'ZSCAN10', 'LINC01591', 'NKX6-2', 'ABRA', 'GLTPD2', 'SNORA72', 'OR6B1', 'WFDC8', 'FBXW12', 'LINC00691', 'MOS', 'LOC284661', 'TRIM55', 'LINC01142', 'OR4A16', 'RBM46', 'TLX3', 'HYPM', 'TAAR9', 'OR4D10', 'CNTNAP4', 'CABS1', 'PRAMEF16', 'VWA5B1', 'CRYGB', 'SNORA2B', 'LINC00452', 'GCG', 'SNORA27', 'CFC1B', 'SCGB3A2', 'PRAMEF5', 'FAM170A', 'OR51T1', 'CGB2', 'GSC2', 'HIST1H3A', 'CCK', 'LRRTM1', 'AGXT2', 'ADRB3', 'AIRE', 'GSTA5', 'OR4D5', 'OR10AD1', 'DUXA', 'MCF2', 'KRTAP12-1', 'MS4A10', 'RPL3L', 'LOC643923', 'AADAC', 'DEFB123', 'OR5B17', 'SERPINB3', 'ANKRD20A20P', 'SNCB', 'MYF5', 'HMSD', 'MT1B', 'CST9L', 'EPGN', 'ZG16', 'SNORD15B', 'TRIM15', 'RHAG', 'GABRB1', 'CLRN1', 'TBC1D3P2', 'ART1', 'OR4D1', 'PRLHR', 'KRTAP10-11', 'GRK1', 'HYMAI', 'MYADML', 'BANF2', 'USP50', 'B3GALT1', 'NPSR1-AS1', 'HRK', 'INS-IGF2', 'NHLH2', 'PABPC1L2A', 'SLC5A2', 'FAM47C', 'TRIM49', 'OR5T2', 'CEACAM22P', 'AQP2', 'MMD2', 'APOA5', 'PACRG-AS1', 'UTS2R', 'PRSS57', 'LINC00523', 'SPINK14', 'MYH7', 'WFDC6', 'INS', 'IGFBP1', 'FAM19A1', 'IFNB1', 'TAS2R42', 'INSC', 'MUC13', 'KRTAP12-3', 'SLCO1B7', 'GHSR', 'CYP1A2', 'C1ORF140', 'SPINT3', 'TNFSF18', 'KLK9', 'STATH', 'KCNB2', 'FLJ25758', 'LINC00202-2', 'MAS1L', 'IFNL2', 'FOXR1', 'SNORA16A', 'IL31', 'MAGEA11', 'TNP2', 'LOC392196', 'SNORA68', 'SLITRK1', 'LOC285629', 'FAM138D', 'FAM138B', 'AMER3', 'F2', 'NPSR1', 'MRGPRX1', 'TAS2R13', 'CTRB2', 'LOC100130417', 'VCX3A', 'ACTR3BP2', 'FAM9B', 'LINC01105', 'KCNK18', 'CLEC4M', 'NMUR2', 'GOLGA2P6', 'ALAS2', 'OR52W1', 'OR52K2', 'ZNF735', 'OR7D4', 'OR10G8', 'SLC5A8', 'OR52N2', 'SFTPB', 'PSG4', 'AKR1C8P', 'SLC10A1', 'C3ORF30', 'CALHM3', 'PASD1', 'OR5H14', 'AWAT1', 'HIST1H3B', 'RNF151', 'OR5K1', 'OR6B2', 'ADCYAP1R1', 'OR52K1', 'CACNG3', 'SHH', 'CCER1', 'OTC', 'OR51B5', 'OR8G2', 'C4ORF50', 'HGC6.3', 'SDC4P', 'OR8H2', 'OR3A2', 'SHD', 'PDX1', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.4014189206223175e-15 NRMSE: 3.7548571974393205e-16 MAPE: 2.6227644739399173e-12 Pearson Correlation: 0.20211169390260825 Spearman Correlation: 0.21724211025075127 Coefficient of Determination: -1.79584744032439 RMSE: 1.206746840747213 NRMSE: 0.23343137587960636 MAPE: 1148.6833765488357 Predictor: ElasticNet Pearson Correlation: 0.8607447432331816 Spearman Correlation: 0.8065502736463434 Coefficient of Determination: 0.6937667027649128 RMSE: 0.3148904708984997 NRMSE: 0.04923625531991239 MAPE: 236.15361035694477 Pearson Correlation: 0.4669702760845659 Spearman Correlation: 0.49088642003017496 Coefficient of Determination: 0.21560190761741582 RMSE: 0.639186656282243 NRMSE: 0.12364334886301513 MAPE: 313.2719102599244 Predictor: RandomForests Pearson Correlation: 0.5641272265334536 Spearman Correlation: 0.535034661588795 Coefficient of Determination: 0.2806321770785436 RMSE: 0.48262389154551677 NRMSE: 0.07546304300610066 MAPE: 290.64327722290733 Pearson Correlation: 0.3976394013905507 Spearman Correlation: 0.4474145562912257 Coefficient of Determination: 0.13922856024989672 RMSE: 0.6695813674889552 NRMSE: 0.1295228581493646 MAPE: 376.20079671089235 Protein: BRCA2 x_train_column_count: 379 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'BTNL3', 'F9', 'FAM183CP', 'LINC00111', 'KCNU1', 'LOC727924', 'CXORF51A', 'OR2M3', 'OR10T2', 'OR1S1', 'SOX1', 'SNORD15A', 'HBG1', 'OR10V1', 'FGF23', 'MS4A6E', 'WFDC5', 'GPR151', 'PRM3', 'SCGB1C1', 'CLEC6A', 'PRSS3P2', 'ASAP1-IT1', 'PPY', 'DNAJB8', 'CT47A11', 'TMEM252', 'OR10A5', 'MAGEB10', 'OR8S1', 'PSG7', 'SUN3', 'SPRR1B', 'PRAMEF8', 'CELA2B', 'PLA2G2F', 'CRYAA', 'KLHL40', 'OR2AG1', 'MC2R', 'USP26', 'HIST1H4F', 'DMBT1P1', 'OR8G5', 'OR10K1', 'NPPC', 'PSAPL1', 'SNORD89', 'SLC5A7', 'C1ORF87', 'ALOX12B', 'TUSC7', 'HBBP1', 'LOC391003', 'C15ORF43', 'SFTA3', 'CAPZA3', 'XAGE5', 'LOC391343', 'LINC00636', 'TBC1D28', 'KRT39', 'C20ORF173', 'C22ORF42', 'BMP10', 'SNORA34', 'IFITM5', 'SNORA70B', 'OR4S1', 'PIWIL3', 'C4ORF51', 'TAS2R60', 'CCKBR', 'OR5B2', 'CASC8', 'IQCF2', 'ARR3', 'KRTAP19-1', 'PROKR1', 'FMR1NB', 'NXF2B', 'ARHGAP36', 'P2RX3', 'TTTY15', 'OPN1MW', 'PPBPP1', 'CHODL-AS1', 'PF4', 'KHDC1L', 'LYZL6', 'TEX33', 'OR1B1', 'HBD', 'FAM153C', 'TKTL2', 'ANKRD18DP', 'MYBPHL', 'AKAP14', 'EDDM3A', 'SYT10', 'ACOT12', 'GAGE1', 'C11ORF94', 'CSH2', 'SERPINB4', 'BRDTP1', 'LGI3', 'PRB1', 'SNORA54', 'PRAP1', 'SNORA51', 'OR10S1', 'SFTPC', 'OTP', 'IGF2BP2-AS1', 'SPACA7', 'KCNQ1DN', 'DMRT1', 'YWHAEP7', 'CYP3A4', 'PRSS1', 'ZAR1L', 'C17ORF64', 'GAGE2D', 'FBP2', 'IFNA13', 'KRTAP19-3', 'SLC13A1', 'LHX9', 'CYP2W1', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.832753633533519 Spearman Correlation: 0.8106031099488002 Coefficient of Determination: 0.6934766375098154 RMSE: 0.11098832142055923 NRMSE: 0.071501576048033 MAPE: 178.4758568064121 Pearson Correlation: 0.07067244362810299 Spearman Correlation: 0.07668434355090632 Coefficient of Determination: -8.99259114173665e+25 RMSE: 1574996217714.2996 NRMSE: 2059760959542.6658 MAPE: 156323115789823.4 Predictor: ElasticNet Pearson Correlation: 0.5620179146083444 Spearman Correlation: 0.39228045234637465 Coefficient of Determination: 0.2486479723147459 RMSE: 0.17376696830395583 NRMSE: 0.11194522036009395 MAPE: 111.4969278725531 Pearson Correlation: 0.11166619274706302 Spearman Correlation: 0.03435703687078393 Coefficient of Determination: -0.06798393199860597 RMSE: 0.1716403733181127 NRMSE: 0.22446919939594936 MAPE: 107.16343755374031 Predictor: RandomForests Pearson Correlation: 0.4869492406286058 Spearman Correlation: 0.41551703643640386 Coefficient of Determination: 0.12429272120638557 RMSE: 0.1875966041039896 NRMSE: 0.12085463301915902 MAPE: 115.50480922846505 Pearson Correlation: 0.22578141926160383 Spearman Correlation: 0.16978017182259134 Coefficient of Determination: -0.05777066544789711 RMSE: 0.17081769235203795 NRMSE: 0.22339330720203746 MAPE: 111.08872845372153 Protein: CDKN2A x_train_column_count: 618 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'BTNL3', 'F9', 'FAM183CP', 'LINC00111', 'KCNU1', 'LOC727924', 'CXORF51A', 'OR2M3', 'OR10T2', 'OR1S1', 'SOX1', 'SNORD15A', 'HBG1', 'OR10V1', 'FGF23', 'MS4A6E', 'WFDC5', 'GPR151', 'PRM3', 'SCGB1C1', 'CLEC6A', 'PRSS3P2', 'ASAP1-IT1', 'PPY', 'DNAJB8', 'CT47A11', 'TMEM252', 'OR10A5', 'MAGEB10', 'OR8S1', 'PSG7', 'SUN3', 'SPRR1B', 'PRAMEF8', 'CELA2B', 'PLA2G2F', 'CRYAA', 'KLHL40', 'OR2AG1', 'MC2R', 'USP26', 'HIST1H4F', 'DMBT1P1', 'OR8G5', 'OR10K1', 'NPPC', 'PSAPL1', 'SNORD89', 'SLC5A7', 'C1ORF87', 'ALOX12B', 'TUSC7', 'HBBP1', 'LOC391003', 'C15ORF43', 'SFTA3', 'CAPZA3', 'XAGE5', 'LOC391343', 'LINC00636', 'TBC1D28', 'KRT39', 'C20ORF173', 'C22ORF42', 'BMP10', 'SNORA34', 'IFITM5', 'SNORA70B', 'OR4S1', 'PIWIL3', 'C4ORF51', 'TAS2R60', 'CCKBR', 'OR5B2', 'CASC8', 'IQCF2', 'ARR3', 'KRTAP19-1', 'PROKR1', 'FMR1NB', 'NXF2B', 'ARHGAP36', 'P2RX3', 'TTTY15', 'OPN1MW', 'PPBPP1', 'CHODL-AS1', 'PF4', 'KHDC1L', 'LYZL6', 'TEX33', 'OR1B1', 'HBD', 'FAM153C', 'TKTL2', 'ANKRD18DP', 'MYBPHL', 'AKAP14', 'EDDM3A', 'SYT10', 'ACOT12', 'GAGE1', 'C11ORF94', 'CSH2', 'SERPINB4', 'BRDTP1', 'LGI3', 'PRB1', 'SNORA54', 'PRAP1', 'SNORA51', 'OR10S1', 'SFTPC', 'OTP', 'IGF2BP2-AS1', 'SPACA7', 'KCNQ1DN', 'DMRT1', 'YWHAEP7', 'CYP3A4', 'PRSS1', 'ZAR1L', 'C17ORF64', 'GAGE2D', 'FBP2', 'IFNA13', 'KRTAP19-3', 'SLC13A1', 'LHX9', 'CYP2W1', 'LINC00469', 'LOC646813', 'FOXE1', 'C9ORF135', 'OR4K2', 'OTOL1', 'HPD', 'OLIG1', 'PLET1', 'LCNL1', 'CRLF2', 'NEU2', 'GABRG3', 'FCAMR', 'CCDC166', 'SVOP', 'FERD3L', 'FDCSP', 'HAND1', 'NPHS2', 'GH1', 'FAM71C', 'C3ORF49', 'USP17L6P', 'XKR7', 'LINC01101', 'FAM27L', 'VRTN', 'SATB2-AS1', 'SCARNA20', 'CNTNAP5', 'ZFAT-AS1', 'ACSM2A', 'OLAH', 'PTF1A', 'C17ORF78', 'PRDM14', 'HOXC12', 'DNAJC5G', 'LCE1D', 'FMO6P', 'PISRT1', 'TMEM207', 'LINC00696', 'GDNF', 'OR13H1', 'CRNN', 'OR51I2', 'AVPR1B', 'CLDN22', 'SPANXN1', 'ZNF479', 'OR5H6', 'LPO', 'FGA', 'OR6M1', 'PRKAG3', 'OR4D6', 'OR7E24', 'CELA2A', 'IL26', 'HFE2', 'UCMA', 'SCGB1A1', 'OR1L1', 'PWRN2', 'SCN1A', 'MYBPC2', 'FTMT', 'BARHL2', 'OPRD1', 'GYS2', 'IVL', 'OR1K1', 'DEFB110', 'ADAM18', 'EPS8L3', 'CCKAR', 'LOC285627', 'HBZ', 'SLC1A6', 'KRTAP21-1', 'CER1', 'SBSN', 'GABRA6', 'LOC729609', 'PRG1', 'SERPINI2', 'CPLX3', 'FAM27B', 'LMNTD1', 'TFF2', 'CT45A1', 'OR4C12', 'OR4D2', 'SCARNA11', 'POM121L2', 'OR56B1', 'NKX2-1', 'CLCA4', 'HBG2', 'LINC00488', 'SNORA59B', 'OR8D4', 'CYP7A1', 'FOXN3-AS2', 'GBX2', 'GAGE2B', 'LINC00608', 'CGB8', 'OR2M4', 'OR52A4P', 'DRGX', 'HTR3E', 'SNORA38B', 'ANP32D', 'LYZL1', 'CCL24', 'HTR5A', 'SLITRK3', 'YIPF7', 'TSPY1', 'SLC25A31', 'RAX', 'ALLC', 'SYCN', 'SNORA44', 'TARM1', 'HMHB1', 'SLC35G3', 'TMEM88B', 'OR6C74', 'ALX4', 'SPACA3', 'LINC00923', 'A1CF', 'OR6F1', 'CD200R1L', 'SLC51B', 'TSPY2', 'FRMPD2B', 'OR9A2', 'KRT13', 'SNORD94', 'TSKS', 'OR8J3', 'NPBWR2', 'ARL5C', 'OR2T29', 'DYDC1', 'GDPD2', 'ARID3C', 'LINC00602', 'NKX2-6', 'LINC00934', 'OR11H4', 'GOLGA8EP', 'OR13C3', 'PLG', 'TRHR', 'LINC00895', 'MAP3K15', 'MAGEA9B', 'ITLN2', 'POU6F2', 'SRY', 'RAX2', 'OR1N1', 'LINC00575', 'SSX5', 'SNORA37', 'TPTE2', 'CNTN5', 'TCERG1L', 'DPPA2', 'NTS', 'ADGRG4', 'ZIM3', 'BMP15', 'ZCCHC13', 'POTED', 'MUSK', 'SNORA71A', 'KIR3DL3', 'LINC00304', 'KCNK4', 'GRIN2B', 'APOC3', 'IQCF3', 'C2ORF83', 'MYH1', 'C18ORF42', 'TRPM1', 'GPR22', 'IL36RN', 'ALPPL2', 'GAGE2C', 'GAGE12F', 'KCNMB2', 'SNORD116-19', 'TPD52L3', 'OR2L8', 'C20ORF166-AS1', 'NLRP8', 'SNORA74A', 'SNORA76C', 'OR2A14', 'OR4F15', 'CFHR4', 'OR2AT4', 'OR11H6', 'SPANXN3', 'CPLX4', 'SOX3', 'FAM170B', 'DAOA', 'CYP2C18', 'LINC01312', 'CSN3', 'EDDM3B', 'GUCA2B', 'ITIH1', 'USH1C', 'F13B', 'ZNF705A', 'FFAR1', 'GPR52', 'SYCP1', 'ARSF', 'EPPIN', 'DNMT3L', 'PRAMEF14', 'MUC2', 'MTVR2', 'LRRC30', 'SPATA31C1', 'MAGEA1', 'ADAM29', 'TRIM48', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 8.108227841521515e-15 NRMSE: 2.0646858601821996e-15 MAPE: 7.157797047580723e-12 Pearson Correlation: 0.07603993095438619 Spearman Correlation: 0.0734996695719398 Coefficient of Determination: -40.34648745869262 RMSE: 3.8963299485149157 NRMSE: 0.9804307764059575 MAPE: 1838.0439674944264 Predictor: ElasticNet Pearson Correlation: 0.8673316619728375 Spearman Correlation: 0.8259633067573562 Coefficient of Determination: 0.7278124025589883 RMSE: 0.35460383408232965 NRMSE: 0.09029661431650064 MAPE: 198.18115998029572 Pearson Correlation: 0.3260093952442686 Spearman Correlation: 0.25212533822117483 Coefficient of Determination: 0.0349936248766316 RMSE: 0.5952528831334517 NRMSE: 0.1497830661365974 MAPE: 306.5709364192943 Predictor: RandomForests Pearson Correlation: 0.6894764125721379 Spearman Correlation: 0.5921426274964147 Coefficient of Determination: 0.47373803558419203 RMSE: 0.49307189914615623 NRMSE: 0.1255562372096856 MAPE: 251.85218521681887 Pearson Correlation: 0.3717400853681722 Spearman Correlation: 0.3305649488402713 Coefficient of Determination: -0.08059642980225523 RMSE: 0.629895028353752 NRMSE: 0.15850004487902972 MAPE: 516.9001773997148 Protein: TP53 x_train_column_count: 1007 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'BTNL3', 'F9', 'FAM183CP', 'LINC00111', 'KCNU1', 'LOC727924', 'CXORF51A', 'OR2M3', 'OR10T2', 'OR1S1', 'SOX1', 'SNORD15A', 'HBG1', 'OR10V1', 'FGF23', 'MS4A6E', 'WFDC5', 'GPR151', 'PRM3', 'SCGB1C1', 'CLEC6A', 'PRSS3P2', 'ASAP1-IT1', 'PPY', 'DNAJB8', 'CT47A11', 'TMEM252', 'OR10A5', 'MAGEB10', 'OR8S1', 'PSG7', 'SUN3', 'SPRR1B', 'PRAMEF8', 'CELA2B', 'PLA2G2F', 'CRYAA', 'KLHL40', 'OR2AG1', 'MC2R', 'USP26', 'HIST1H4F', 'DMBT1P1', 'OR8G5', 'OR10K1', 'NPPC', 'PSAPL1', 'SNORD89', 'SLC5A7', 'C1ORF87', 'ALOX12B', 'TUSC7', 'HBBP1', 'LOC391003', 'C15ORF43', 'SFTA3', 'CAPZA3', 'XAGE5', 'LOC391343', 'LINC00636', 'TBC1D28', 'KRT39', 'C20ORF173', 'C22ORF42', 'BMP10', 'SNORA34', 'IFITM5', 'SNORA70B', 'OR4S1', 'PIWIL3', 'C4ORF51', 'TAS2R60', 'CCKBR', 'OR5B2', 'CASC8', 'IQCF2', 'ARR3', 'KRTAP19-1', 'PROKR1', 'FMR1NB', 'NXF2B', 'ARHGAP36', 'P2RX3', 'TTTY15', 'OPN1MW', 'PPBPP1', 'CHODL-AS1', 'PF4', 'KHDC1L', 'LYZL6', 'TEX33', 'OR1B1', 'HBD', 'FAM153C', 'TKTL2', 'ANKRD18DP', 'MYBPHL', 'AKAP14', 'EDDM3A', 'SYT10', 'ACOT12', 'GAGE1', 'C11ORF94', 'CSH2', 'SERPINB4', 'BRDTP1', 'LGI3', 'PRB1', 'SNORA54', 'PRAP1', 'SNORA51', 'OR10S1', 'SFTPC', 'OTP', 'IGF2BP2-AS1', 'SPACA7', 'KCNQ1DN', 'DMRT1', 'YWHAEP7', 'CYP3A4', 'PRSS1', 'ZAR1L', 'C17ORF64', 'GAGE2D', 'FBP2', 'IFNA13', 'KRTAP19-3', 'SLC13A1', 'LHX9', 'CYP2W1', 'LINC00469', 'LOC646813', 'FOXE1', 'C9ORF135', 'OR4K2', 'OTOL1', 'HPD', 'OLIG1', 'PLET1', 'LCNL1', 'CRLF2', 'NEU2', 'GABRG3', 'FCAMR', 'CCDC166', 'SVOP', 'FERD3L', 'FDCSP', 'HAND1', 'NPHS2', 'GH1', 'FAM71C', 'C3ORF49', 'USP17L6P', 'XKR7', 'LINC01101', 'FAM27L', 'VRTN', 'SATB2-AS1', 'SCARNA20', 'CNTNAP5', 'ZFAT-AS1', 'ACSM2A', 'OLAH', 'PTF1A', 'C17ORF78', 'PRDM14', 'HOXC12', 'DNAJC5G', 'LCE1D', 'FMO6P', 'PISRT1', 'TMEM207', 'LINC00696', 'GDNF', 'OR13H1', 'CRNN', 'OR51I2', 'AVPR1B', 'CLDN22', 'SPANXN1', 'ZNF479', 'OR5H6', 'LPO', 'FGA', 'OR6M1', 'PRKAG3', 'OR4D6', 'OR7E24', 'CELA2A', 'IL26', 'HFE2', 'UCMA', 'SCGB1A1', 'OR1L1', 'PWRN2', 'SCN1A', 'MYBPC2', 'FTMT', 'BARHL2', 'OPRD1', 'GYS2', 'IVL', 'OR1K1', 'DEFB110', 'ADAM18', 'EPS8L3', 'CCKAR', 'LOC285627', 'HBZ', 'SLC1A6', 'KRTAP21-1', 'CER1', 'SBSN', 'GABRA6', 'LOC729609', 'PRG1', 'SERPINI2', 'CPLX3', 'FAM27B', 'LMNTD1', 'TFF2', 'CT45A1', 'OR4C12', 'OR4D2', 'SCARNA11', 'POM121L2', 'OR56B1', 'NKX2-1', 'CLCA4', 'HBG2', 'LINC00488', 'SNORA59B', 'OR8D4', 'CYP7A1', 'FOXN3-AS2', 'GBX2', 'GAGE2B', 'LINC00608', 'CGB8', 'OR2M4', 'OR52A4P', 'DRGX', 'HTR3E', 'SNORA38B', 'ANP32D', 'LYZL1', 'CCL24', 'HTR5A', 'SLITRK3', 'YIPF7', 'TSPY1', 'SLC25A31', 'RAX', 'ALLC', 'SYCN', 'SNORA44', 'TARM1', 'HMHB1', 'SLC35G3', 'TMEM88B', 'OR6C74', 'ALX4', 'SPACA3', 'LINC00923', 'A1CF', 'OR6F1', 'CD200R1L', 'SLC51B', 'TSPY2', 'FRMPD2B', 'OR9A2', 'KRT13', 'SNORD94', 'TSKS', 'OR8J3', 'NPBWR2', 'ARL5C', 'OR2T29', 'DYDC1', 'GDPD2', 'ARID3C', 'LINC00602', 'NKX2-6', 'LINC00934', 'OR11H4', 'GOLGA8EP', 'OR13C3', 'PLG', 'TRHR', 'LINC00895', 'MAP3K15', 'MAGEA9B', 'ITLN2', 'POU6F2', 'SRY', 'RAX2', 'OR1N1', 'LINC00575', 'SSX5', 'SNORA37', 'TPTE2', 'CNTN5', 'TCERG1L', 'DPPA2', 'NTS', 'ADGRG4', 'ZIM3', 'BMP15', 'ZCCHC13', 'POTED', 'MUSK', 'SNORA71A', 'KIR3DL3', 'LINC00304', 'KCNK4', 'GRIN2B', 'APOC3', 'IQCF3', 'C2ORF83', 'MYH1', 'C18ORF42', 'TRPM1', 'GPR22', 'IL36RN', 'ALPPL2', 'GAGE2C', 'GAGE12F', 'KCNMB2', 'SNORD116-19', 'TPD52L3', 'OR2L8', 'C20ORF166-AS1', 'NLRP8', 'SNORA74A', 'SNORA76C', 'OR2A14', 'OR4F15', 'CFHR4', 'OR2AT4', 'OR11H6', 'SPANXN3', 'CPLX4', 'SOX3', 'FAM170B', 'DAOA', 'CYP2C18', 'LINC01312', 'CSN3', 'EDDM3B', 'GUCA2B', 'ITIH1', 'USH1C', 'F13B', 'ZNF705A', 'FFAR1', 'GPR52', 'SYCP1', 'ARSF', 'EPPIN', 'DNMT3L', 'PRAMEF14', 'MUC2', 'MTVR2', 'LRRC30', 'SPATA31C1', 'MAGEA1', 'ADAM29', 'TRIM48', 'OR52N5', 'CXADRP2', 'BPIFB3', 'DUSP21', 'OR2T10', 'FAM205A', 'SLC32A1', 'DMP1', 'FOXD4L3', 'PPIAL4E', 'MMP23A', 'PSKH2', 'BTN1A1', 'OR5C1', 'C6ORF10', 'ACER1', 'NKAIN3', 'AATK-AS1', 'SPINK1', 'IFNA14', 'MORC1', 'TRIM75P', 'LOC647859', 'TTTY2', 'TMIGD1', 'SPOCK3', 'CHRNB3', 'BET1P1', 'GCSAML-AS1', 'CSNK1A1P1', 'OR2A2', 'SCARNA8', 'FAM19A4', 'ADGRG7', 'KRTAP4-3', 'OR9G4', 'TMEM72', 'CRYGC', 'PAGE5', 'ODAM', 'OR1S2', 'KRTAP1-5', 'REC114', 'KRTAP1-1', 'TREML4', 'IQCF6', 'TMEM14E', 'KRTAP12-2', 'PPY2P', 'ZFY', 'TSPAN19', 'IQCJ', 'KRT83', 'RFX6', 'PLA2G12B', 'DMRTC1', 'SNORD115-26', 'OR6C4', 'COL6A4P1', 'DCT', 'VWC2L', 'SH2D7', 'HCRTR1', 'NUTM1', 'OR52A5', 'KRT3', 'TPTE', 'REG4', 'AADACL3', 'OR2G6', 'CT47A1', 'CLEC4G', 'OR6S1', 'SNORA16B', 'CGB5', 'BTF3P11', 'SPATA3', 'MAGEA5', 'LINC01020', 'SPDYC', 'KLRC4', 'S100G', 'KRTAP11-1', 'RAPGEF4-AS1', 'LOC400736', 'NF1P2', 'NXPE1', 'KRT85', 'FRMPD4', 'TSGA13', 'RPE65', 'TRPV5', 'LOC100129935', 'ANKRD34C', 'EPB42', 'CA6', 'OR2F1', 'APCS', 'CHIAP2', 'FOXG1', 'KCNJ16', 'ASB15', 'IHH', 'AKR1D1', 'OACYLP', 'GNAS-AS1', 'KRT74', 'KRTAP3-2', 'LOC400940', 'SDR16C6P', 'B3GNT6', 'IFNL1', 'PCGEM1', 'MAGEA12', 'POTEH', 'COX7B2', 'TCP10L2', 'CPA2', 'LINC00303', 'C2ORF27B', 'MAGEB3', 'PCP4', 'DEFB126', 'GFI1B', 'CTRB1', 'C1ORF146', 'UGT1A4', 'CNGA2', 'SLC22A10', 'DISC2', 'SPANXA2', 'INSM2', 'MTNR1B', 'LY6G6D', 'C15ORF32', 'TSPEAR-AS2', 'PRR32', 'TMPRSS11F', 'PRSS48', 'FAM24A', 'GABRR3', 'OR2A12', 'GML', 'TMEM132D', 'LINC00113', 'RNASE8', 'HIST2H2AB', 'ZSCAN10', 'LINC01591', 'NKX6-2', 'ABRA', 'GLTPD2', 'SNORA72', 'OR6B1', 'WFDC8', 'FBXW12', 'LINC00691', 'MOS', 'LOC284661', 'TRIM55', 'LINC01142', 'OR4A16', 'RBM46', 'TLX3', 'HYPM', 'TAAR9', 'OR4D10', 'CNTNAP4', 'CABS1', 'PRAMEF16', 'VWA5B1', 'CRYGB', 'SNORA2B', 'LINC00452', 'GCG', 'SNORA27', 'CFC1B', 'SCGB3A2', 'PRAMEF5', 'FAM170A', 'OR51T1', 'CGB2', 'GSC2', 'HIST1H3A', 'CCK', 'LRRTM1', 'AGXT2', 'ADRB3', 'AIRE', 'GSTA5', 'OR4D5', 'OR10AD1', 'DUXA', 'MCF2', 'KRTAP12-1', 'MS4A10', 'RPL3L', 'LOC643923', 'AADAC', 'DEFB123', 'OR5B17', 'SERPINB3', 'ANKRD20A20P', 'SNCB', 'MYF5', 'HMSD', 'MT1B', 'CST9L', 'EPGN', 'ZG16', 'SNORD15B', 'TRIM15', 'RHAG', 'GABRB1', 'CLRN1', 'TBC1D3P2', 'ART1', 'OR4D1', 'PRLHR', 'KRTAP10-11', 'GRK1', 'HYMAI', 'MYADML', 'BANF2', 'USP50', 'B3GALT1', 'NPSR1-AS1', 'HRK', 'INS-IGF2', 'NHLH2', 'PABPC1L2A', 'SLC5A2', 'FAM47C', 'TRIM49', 'OR5T2', 'CEACAM22P', 'AQP2', 'MMD2', 'APOA5', 'PACRG-AS1', 'UTS2R', 'PRSS57', 'LINC00523', 'SPINK14', 'MYH7', 'WFDC6', 'INS', 'IGFBP1', 'FAM19A1', 'IFNB1', 'TAS2R42', 'INSC', 'MUC13', 'KRTAP12-3', 'SLCO1B7', 'GHSR', 'CYP1A2', 'C1ORF140', 'SPINT3', 'TNFSF18', 'KLK9', 'STATH', 'KCNB2', 'FLJ25758', 'LINC00202-2', 'MAS1L', 'IFNL2', 'FOXR1', 'SNORA16A', 'IL31', 'MAGEA11', 'TNP2', 'LOC392196', 'SNORA68', 'SLITRK1', 'LOC285629', 'FAM138D', 'FAM138B', 'AMER3', 'F2', 'NPSR1', 'MRGPRX1', 'TAS2R13', 'CTRB2', 'LOC100130417', 'VCX3A', 'ACTR3BP2', 'FAM9B', 'LINC01105', 'KCNK18', 'CLEC4M', 'NMUR2', 'GOLGA2P6', 'ALAS2', 'OR52W1', 'OR52K2', 'ZNF735', 'OR7D4', 'OR10G8', 'SLC5A8', 'OR52N2', 'SFTPB', 'PSG4', 'AKR1C8P', 'SLC10A1', 'C3ORF30', 'CALHM3', 'PASD1', 'OR5H14', 'AWAT1', 'HIST1H3B', 'RNF151', 'OR5K1', 'OR6B2', 'ADCYAP1R1', 'OR52K1', 'CACNG3', 'SHH', 'CCER1', 'OTC', 'OR51B5', 'OR8G2', 'C4ORF50', 'HGC6.3', 'SDC4P', 'OR8H2', 'OR3A2', 'SHD', 'PDX1', 'ERC2-IT1', 'HAO1', 'KRTAP21-2', 'OR4C16', 'CLCA3P', 'VPREB1', 'LINC00052', 'SERPINA7', 'PRLH', 'TSNAX-DISC1', 'SKINTL', 'DSCR10', 'TSPAN16', 'LINC00597', 'CHRNA9', 'HTR1B', 'TMEM8C', 'PRAC1', 'HAVCR1', 'SLC38A8', 'LEUTX', 'F11', 'OR4X2', 'HNRNPCL1', 'FMO9P', 'C7ORF57', 'GPR61', 'NEUROG3', 'AHSG', 'PSG11', 'KRTAP7-1', 'GPHA2', 'DACH2', 'HSD52', 'BRINP3', 'ACSM2B', 'B4GALNT2', 'CALR3', 'SPATA45', 'PPAN-P2RY11', 'SLC4A9', 'POU4F2', 'UGT2B28', 'KRT32', 'SLC25A3P1', 'CCDC63', 'HS3ST4', 'NXNL1', 'SLC9C1', 'GOLGA6L1', 'CPNE6', 'RNF222', 'CELP', 'SSX2', 'ACTBL2', 'VGLL2', 'HPSE2', 'CD1B', 'CLRN1-AS1', 'KRTAP10-7', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.6108924558042391e-15 NRMSE: 4.0969822625301745e-16 MAPE: 7.325056251974543e-12 Pearson Correlation: 0.26090369586339146 Spearman Correlation: 0.22421975336350833 Coefficient of Determination: -0.7194633028843229 RMSE: 0.6925486363290646 NRMSE: 0.18549581795341225 MAPE: 398.45706788198385 Predictor: ElasticNet Pearson Correlation: 0.8551476650673357 Spearman Correlation: 0.7678237705295442 Coefficient of Determination: 0.6872443037237383 RMSE: 0.23700435476057777 NRMSE: 0.06027730989103939 MAPE: 565.6953145181438 Pearson Correlation: 0.5023578070691405 Spearman Correlation: 0.43417748350976954 Coefficient of Determination: 0.2410807162044597 RMSE: 0.4600993469280658 NRMSE: 0.12323539491845878 MAPE: 160.35501654464144 Predictor: RandomForests Pearson Correlation: 0.6502683900131322 Spearman Correlation: 0.5678507669606474 Coefficient of Determination: 0.36179509163699897 RMSE: 0.33855854666245333 NRMSE: 0.08610558423725256 MAPE: 641.8254671785085 Pearson Correlation: 0.5684016542543556 Spearman Correlation: 0.49431096014754444 Coefficient of Determination: 0.2678960549681868 RMSE: 0.451897767996809 NRMSE: 0.12103864148836453 MAPE: 178.85023289793455 Protein: CTNNB1 x_train_column_count: 1007 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'BTNL3', 'F9', 'FAM183CP', 'LINC00111', 'KCNU1', 'LOC727924', 'CXORF51A', 'OR2M3', 'OR10T2', 'OR1S1', 'SOX1', 'SNORD15A', 'HBG1', 'OR10V1', 'FGF23', 'MS4A6E', 'WFDC5', 'GPR151', 'PRM3', 'SCGB1C1', 'CLEC6A', 'PRSS3P2', 'ASAP1-IT1', 'PPY', 'DNAJB8', 'CT47A11', 'TMEM252', 'OR10A5', 'MAGEB10', 'OR8S1', 'PSG7', 'SUN3', 'SPRR1B', 'PRAMEF8', 'CELA2B', 'PLA2G2F', 'CRYAA', 'KLHL40', 'OR2AG1', 'MC2R', 'USP26', 'HIST1H4F', 'DMBT1P1', 'OR8G5', 'OR10K1', 'NPPC', 'PSAPL1', 'SNORD89', 'SLC5A7', 'C1ORF87', 'ALOX12B', 'TUSC7', 'HBBP1', 'LOC391003', 'C15ORF43', 'SFTA3', 'CAPZA3', 'XAGE5', 'LOC391343', 'LINC00636', 'TBC1D28', 'KRT39', 'C20ORF173', 'C22ORF42', 'BMP10', 'SNORA34', 'IFITM5', 'SNORA70B', 'OR4S1', 'PIWIL3', 'C4ORF51', 'TAS2R60', 'CCKBR', 'OR5B2', 'CASC8', 'IQCF2', 'ARR3', 'KRTAP19-1', 'PROKR1', 'FMR1NB', 'NXF2B', 'ARHGAP36', 'P2RX3', 'TTTY15', 'OPN1MW', 'PPBPP1', 'CHODL-AS1', 'PF4', 'KHDC1L', 'LYZL6', 'TEX33', 'OR1B1', 'HBD', 'FAM153C', 'TKTL2', 'ANKRD18DP', 'MYBPHL', 'AKAP14', 'EDDM3A', 'SYT10', 'ACOT12', 'GAGE1', 'C11ORF94', 'CSH2', 'SERPINB4', 'BRDTP1', 'LGI3', 'PRB1', 'SNORA54', 'PRAP1', 'SNORA51', 'OR10S1', 'SFTPC', 'OTP', 'IGF2BP2-AS1', 'SPACA7', 'KCNQ1DN', 'DMRT1', 'YWHAEP7', 'CYP3A4', 'PRSS1', 'ZAR1L', 'C17ORF64', 'GAGE2D', 'FBP2', 'IFNA13', 'KRTAP19-3', 'SLC13A1', 'LHX9', 'CYP2W1', 'LINC00469', 'LOC646813', 'FOXE1', 'C9ORF135', 'OR4K2', 'OTOL1', 'HPD', 'OLIG1', 'PLET1', 'LCNL1', 'CRLF2', 'NEU2', 'GABRG3', 'FCAMR', 'CCDC166', 'SVOP', 'FERD3L', 'FDCSP', 'HAND1', 'NPHS2', 'GH1', 'FAM71C', 'C3ORF49', 'USP17L6P', 'XKR7', 'LINC01101', 'FAM27L', 'VRTN', 'SATB2-AS1', 'SCARNA20', 'CNTNAP5', 'ZFAT-AS1', 'ACSM2A', 'OLAH', 'PTF1A', 'C17ORF78', 'PRDM14', 'HOXC12', 'DNAJC5G', 'LCE1D', 'FMO6P', 'PISRT1', 'TMEM207', 'LINC00696', 'GDNF', 'OR13H1', 'CRNN', 'OR51I2', 'AVPR1B', 'CLDN22', 'SPANXN1', 'ZNF479', 'OR5H6', 'LPO', 'FGA', 'OR6M1', 'PRKAG3', 'OR4D6', 'OR7E24', 'CELA2A', 'IL26', 'HFE2', 'UCMA', 'SCGB1A1', 'OR1L1', 'PWRN2', 'SCN1A', 'MYBPC2', 'FTMT', 'BARHL2', 'OPRD1', 'GYS2', 'IVL', 'OR1K1', 'DEFB110', 'ADAM18', 'EPS8L3', 'CCKAR', 'LOC285627', 'HBZ', 'SLC1A6', 'KRTAP21-1', 'CER1', 'SBSN', 'GABRA6', 'LOC729609', 'PRG1', 'SERPINI2', 'CPLX3', 'FAM27B', 'LMNTD1', 'TFF2', 'CT45A1', 'OR4C12', 'OR4D2', 'SCARNA11', 'POM121L2', 'OR56B1', 'NKX2-1', 'CLCA4', 'HBG2', 'LINC00488', 'SNORA59B', 'OR8D4', 'CYP7A1', 'FOXN3-AS2', 'GBX2', 'GAGE2B', 'LINC00608', 'CGB8', 'OR2M4', 'OR52A4P', 'DRGX', 'HTR3E', 'SNORA38B', 'ANP32D', 'LYZL1', 'CCL24', 'HTR5A', 'SLITRK3', 'YIPF7', 'TSPY1', 'SLC25A31', 'RAX', 'ALLC', 'SYCN', 'SNORA44', 'TARM1', 'HMHB1', 'SLC35G3', 'TMEM88B', 'OR6C74', 'ALX4', 'SPACA3', 'LINC00923', 'A1CF', 'OR6F1', 'CD200R1L', 'SLC51B', 'TSPY2', 'FRMPD2B', 'OR9A2', 'KRT13', 'SNORD94', 'TSKS', 'OR8J3', 'NPBWR2', 'ARL5C', 'OR2T29', 'DYDC1', 'GDPD2', 'ARID3C', 'LINC00602', 'NKX2-6', 'LINC00934', 'OR11H4', 'GOLGA8EP', 'OR13C3', 'PLG', 'TRHR', 'LINC00895', 'MAP3K15', 'MAGEA9B', 'ITLN2', 'POU6F2', 'SRY', 'RAX2', 'OR1N1', 'LINC00575', 'SSX5', 'SNORA37', 'TPTE2', 'CNTN5', 'TCERG1L', 'DPPA2', 'NTS', 'ADGRG4', 'ZIM3', 'BMP15', 'ZCCHC13', 'POTED', 'MUSK', 'SNORA71A', 'KIR3DL3', 'LINC00304', 'KCNK4', 'GRIN2B', 'APOC3', 'IQCF3', 'C2ORF83', 'MYH1', 'C18ORF42', 'TRPM1', 'GPR22', 'IL36RN', 'ALPPL2', 'GAGE2C', 'GAGE12F', 'KCNMB2', 'SNORD116-19', 'TPD52L3', 'OR2L8', 'C20ORF166-AS1', 'NLRP8', 'SNORA74A', 'SNORA76C', 'OR2A14', 'OR4F15', 'CFHR4', 'OR2AT4', 'OR11H6', 'SPANXN3', 'CPLX4', 'SOX3', 'FAM170B', 'DAOA', 'CYP2C18', 'LINC01312', 'CSN3', 'EDDM3B', 'GUCA2B', 'ITIH1', 'USH1C', 'F13B', 'ZNF705A', 'FFAR1', 'GPR52', 'SYCP1', 'ARSF', 'EPPIN', 'DNMT3L', 'PRAMEF14', 'MUC2', 'MTVR2', 'LRRC30', 'SPATA31C1', 'MAGEA1', 'ADAM29', 'TRIM48', 'OR52N5', 'CXADRP2', 'BPIFB3', 'DUSP21', 'OR2T10', 'FAM205A', 'SLC32A1', 'DMP1', 'FOXD4L3', 'PPIAL4E', 'MMP23A', 'PSKH2', 'BTN1A1', 'OR5C1', 'C6ORF10', 'ACER1', 'NKAIN3', 'AATK-AS1', 'SPINK1', 'IFNA14', 'MORC1', 'TRIM75P', 'LOC647859', 'TTTY2', 'TMIGD1', 'SPOCK3', 'CHRNB3', 'BET1P1', 'GCSAML-AS1', 'CSNK1A1P1', 'OR2A2', 'SCARNA8', 'FAM19A4', 'ADGRG7', 'KRTAP4-3', 'OR9G4', 'TMEM72', 'CRYGC', 'PAGE5', 'ODAM', 'OR1S2', 'KRTAP1-5', 'REC114', 'KRTAP1-1', 'TREML4', 'IQCF6', 'TMEM14E', 'KRTAP12-2', 'PPY2P', 'ZFY', 'TSPAN19', 'IQCJ', 'KRT83', 'RFX6', 'PLA2G12B', 'DMRTC1', 'SNORD115-26', 'OR6C4', 'COL6A4P1', 'DCT', 'VWC2L', 'SH2D7', 'HCRTR1', 'NUTM1', 'OR52A5', 'KRT3', 'TPTE', 'REG4', 'AADACL3', 'OR2G6', 'CT47A1', 'CLEC4G', 'OR6S1', 'SNORA16B', 'CGB5', 'BTF3P11', 'SPATA3', 'MAGEA5', 'LINC01020', 'SPDYC', 'KLRC4', 'S100G', 'KRTAP11-1', 'RAPGEF4-AS1', 'LOC400736', 'NF1P2', 'NXPE1', 'KRT85', 'FRMPD4', 'TSGA13', 'RPE65', 'TRPV5', 'LOC100129935', 'ANKRD34C', 'EPB42', 'CA6', 'OR2F1', 'APCS', 'CHIAP2', 'FOXG1', 'KCNJ16', 'ASB15', 'IHH', 'AKR1D1', 'OACYLP', 'GNAS-AS1', 'KRT74', 'KRTAP3-2', 'LOC400940', 'SDR16C6P', 'B3GNT6', 'IFNL1', 'PCGEM1', 'MAGEA12', 'POTEH', 'COX7B2', 'TCP10L2', 'CPA2', 'LINC00303', 'C2ORF27B', 'MAGEB3', 'PCP4', 'DEFB126', 'GFI1B', 'CTRB1', 'C1ORF146', 'UGT1A4', 'CNGA2', 'SLC22A10', 'DISC2', 'SPANXA2', 'INSM2', 'MTNR1B', 'LY6G6D', 'C15ORF32', 'TSPEAR-AS2', 'PRR32', 'TMPRSS11F', 'PRSS48', 'FAM24A', 'GABRR3', 'OR2A12', 'GML', 'TMEM132D', 'LINC00113', 'RNASE8', 'HIST2H2AB', 'ZSCAN10', 'LINC01591', 'NKX6-2', 'ABRA', 'GLTPD2', 'SNORA72', 'OR6B1', 'WFDC8', 'FBXW12', 'LINC00691', 'MOS', 'LOC284661', 'TRIM55', 'LINC01142', 'OR4A16', 'RBM46', 'TLX3', 'HYPM', 'TAAR9', 'OR4D10', 'CNTNAP4', 'CABS1', 'PRAMEF16', 'VWA5B1', 'CRYGB', 'SNORA2B', 'LINC00452', 'GCG', 'SNORA27', 'CFC1B', 'SCGB3A2', 'PRAMEF5', 'FAM170A', 'OR51T1', 'CGB2', 'GSC2', 'HIST1H3A', 'CCK', 'LRRTM1', 'AGXT2', 'ADRB3', 'AIRE', 'GSTA5', 'OR4D5', 'OR10AD1', 'DUXA', 'MCF2', 'KRTAP12-1', 'MS4A10', 'RPL3L', 'LOC643923', 'AADAC', 'DEFB123', 'OR5B17', 'SERPINB3', 'ANKRD20A20P', 'SNCB', 'MYF5', 'HMSD', 'MT1B', 'CST9L', 'EPGN', 'ZG16', 'SNORD15B', 'TRIM15', 'RHAG', 'GABRB1', 'CLRN1', 'TBC1D3P2', 'ART1', 'OR4D1', 'PRLHR', 'KRTAP10-11', 'GRK1', 'HYMAI', 'MYADML', 'BANF2', 'USP50', 'B3GALT1', 'NPSR1-AS1', 'HRK', 'INS-IGF2', 'NHLH2', 'PABPC1L2A', 'SLC5A2', 'FAM47C', 'TRIM49', 'OR5T2', 'CEACAM22P', 'AQP2', 'MMD2', 'APOA5', 'PACRG-AS1', 'UTS2R', 'PRSS57', 'LINC00523', 'SPINK14', 'MYH7', 'WFDC6', 'INS', 'IGFBP1', 'FAM19A1', 'IFNB1', 'TAS2R42', 'INSC', 'MUC13', 'KRTAP12-3', 'SLCO1B7', 'GHSR', 'CYP1A2', 'C1ORF140', 'SPINT3', 'TNFSF18', 'KLK9', 'STATH', 'KCNB2', 'FLJ25758', 'LINC00202-2', 'MAS1L', 'IFNL2', 'FOXR1', 'SNORA16A', 'IL31', 'MAGEA11', 'TNP2', 'LOC392196', 'SNORA68', 'SLITRK1', 'LOC285629', 'FAM138D', 'FAM138B', 'AMER3', 'F2', 'NPSR1', 'MRGPRX1', 'TAS2R13', 'CTRB2', 'LOC100130417', 'VCX3A', 'ACTR3BP2', 'FAM9B', 'LINC01105', 'KCNK18', 'CLEC4M', 'NMUR2', 'GOLGA2P6', 'ALAS2', 'OR52W1', 'OR52K2', 'ZNF735', 'OR7D4', 'OR10G8', 'SLC5A8', 'OR52N2', 'SFTPB', 'PSG4', 'AKR1C8P', 'SLC10A1', 'C3ORF30', 'CALHM3', 'PASD1', 'OR5H14', 'AWAT1', 'HIST1H3B', 'RNF151', 'OR5K1', 'OR6B2', 'ADCYAP1R1', 'OR52K1', 'CACNG3', 'SHH', 'CCER1', 'OTC', 'OR51B5', 'OR8G2', 'C4ORF50', 'HGC6.3', 'SDC4P', 'OR8H2', 'OR3A2', 'SHD', 'PDX1', 'ERC2-IT1', 'HAO1', 'KRTAP21-2', 'OR4C16', 'CLCA3P', 'VPREB1', 'LINC00052', 'SERPINA7', 'PRLH', 'TSNAX-DISC1', 'SKINTL', 'DSCR10', 'TSPAN16', 'LINC00597', 'CHRNA9', 'HTR1B', 'TMEM8C', 'PRAC1', 'HAVCR1', 'SLC38A8', 'LEUTX', 'F11', 'OR4X2', 'HNRNPCL1', 'FMO9P', 'C7ORF57', 'GPR61', 'NEUROG3', 'AHSG', 'PSG11', 'KRTAP7-1', 'GPHA2', 'DACH2', 'HSD52', 'BRINP3', 'ACSM2B', 'B4GALNT2', 'CALR3', 'SPATA45', 'PPAN-P2RY11', 'SLC4A9', 'POU4F2', 'UGT2B28', 'KRT32', 'SLC25A3P1', 'CCDC63', 'HS3ST4', 'NXNL1', 'SLC9C1', 'GOLGA6L1', 'CPNE6', 'RNF222', 'CELP', 'SSX2', 'ACTBL2', 'VGLL2', 'HPSE2', 'CD1B', 'CLRN1-AS1', 'KRTAP10-7', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 3.204711481928924e-15 NRMSE: 6.303523764612361e-16 MAPE: 4.596331633889109e-12 Pearson Correlation: 0.12065613974229439 Spearman Correlation: 0.09587401339168818 Coefficient of Determination: -3.066664551395209 RMSE: 1.3665627316145021 NRMSE: 0.4376656124361473 MAPE: 518.0517401387906 Predictor: ElasticNet Pearson Correlation: 0.8846253085595108 Spearman Correlation: 0.8874494707097498 Coefficient of Determination: 0.7370515597771052 RMSE: 0.38765559979796127 NRMSE: 0.0762501179775691 MAPE: 199.8289549336806 Pearson Correlation: 0.32290305686205567 Spearman Correlation: 0.3165450940784798 Coefficient of Determination: -0.01739178568140165 RMSE: 0.6835251691473025 NRMSE: 0.218910888501213 MAPE: 241.68912179955325 Predictor: RandomForests Pearson Correlation: 0.5835862140697211 Spearman Correlation: 0.564692566625456 Coefficient of Determination: 0.20408078255743978 RMSE: 0.6744430097599473 NRMSE: 0.13265991537371113 MAPE: 578.8796090056196 Pearson Correlation: 0.365179665000061 Spearman Correlation: 0.40040648885896335 Coefficient of Determination: 0.1185755429660369 RMSE: 0.6362135962534538 NRMSE: 0.2037585299252988 MAPE: 248.00798041319018 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'BTNL3', 'F9', 'FAM183CP', 'LINC00111', 'KCNU1', 'LOC727924', 'CXORF51A', 'OR2M3', 'OR10T2', 'OR1S1', 'SOX1', 'SNORD15A', 'HBG1', 'OR10V1', 'FGF23', 'MS4A6E', 'WFDC5', 'GPR151', 'PRM3', 'SCGB1C1', 'CLEC6A', 'PRSS3P2', 'ASAP1-IT1', 'PPY', 'DNAJB8', 'CT47A11', 'TMEM252', 'OR10A5', 'MAGEB10', 'OR8S1', 'PSG7', 'SUN3', 'SPRR1B', 'PRAMEF8', 'CELA2B', 'PLA2G2F', 'CRYAA', 'KLHL40', 'OR2AG1', 'MC2R', 'USP26', 'HIST1H4F', 'DMBT1P1', 'OR8G5', 'OR10K1', 'NPPC', 'PSAPL1', 'SNORD89', 'SLC5A7', 'C1ORF87', 'ALOX12B', 'TUSC7', 'HBBP1', 'LOC391003', 'C15ORF43', 'SFTA3', 'CAPZA3', 'XAGE5', 'LOC391343', 'LINC00636', 'TBC1D28', 'KRT39', 'C20ORF173', 'C22ORF42', 'BMP10', 'SNORA34', 'IFITM5', 'SNORA70B', 'OR4S1', 'PIWIL3', 'C4ORF51', 'TAS2R60', 'CCKBR', 'OR5B2', 'CASC8', 'IQCF2', 'ARR3', 'KRTAP19-1', 'PROKR1', 'FMR1NB', 'NXF2B', 'ARHGAP36', 'P2RX3', 'TTTY15', 'OPN1MW', 'PPBPP1', 'CHODL-AS1', 'PF4', 'KHDC1L', 'LYZL6', 'TEX33', 'OR1B1', 'HBD', 'FAM153C', 'TKTL2', 'ANKRD18DP', 'MYBPHL', 'AKAP14', 'EDDM3A', 'SYT10', 'ACOT12', 'GAGE1', 'C11ORF94', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.9455334122927708 Spearman Correlation: 0.8516484244754488 Coefficient of Determination: 0.8940317114692515 RMSE: 0.14609458606705672 NRMSE: 0.05203725238363552 MAPE: 28.26423608364081 Pearson Correlation: -0.01701871730269025 Spearman Correlation: 0.26529258469556977 Coefficient of Determination: -7.253356793831849e+24 RMSE: 1745456098803.643 NRMSE: 421231290586.5876 MAPE: 21026095854396.87 Predictor: ElasticNet Pearson Correlation: 0.8561894644382064 Spearman Correlation: 0.7294656096537382 Coefficient of Determination: 0.7087570077721321 RMSE: 0.24219986923872797 NRMSE: 0.08626887595324237 MAPE: 58.58050050769332 Pearson Correlation: 0.7949060007880667 Spearman Correlation: 0.6633573984713027 Coefficient of Determination: 0.6258067705888976 RMSE: 0.39644904144639026 NRMSE: 0.09567513127069775 MAPE: 98.85734312072911 Predictor: RandomForests Pearson Correlation: 0.8619694406563877 Spearman Correlation: 0.7122059201594867 Coefficient of Determination: 0.7405251481357392 RMSE: 0.22860924981316724 NRMSE: 0.08142804979988147 MAPE: 57.3993267801535 Pearson Correlation: 0.7807286040754466 Spearman Correlation: 0.7306522599538879 Coefficient of Determination: 0.5792723298778331 RMSE: 0.42037796859568743 NRMSE: 0.10144990433566316 MAPE: 77.73294578263943 Protein: CCND1 x_train_column_count: 862 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'BTNL3', 'F9', 'FAM183CP', 'LINC00111', 'KCNU1', 'LOC727924', 'CXORF51A', 'OR2M3', 'OR10T2', 'OR1S1', 'SOX1', 'SNORD15A', 'HBG1', 'OR10V1', 'FGF23', 'MS4A6E', 'WFDC5', 'GPR151', 'PRM3', 'SCGB1C1', 'CLEC6A', 'PRSS3P2', 'ASAP1-IT1', 'PPY', 'DNAJB8', 'CT47A11', 'TMEM252', 'OR10A5', 'MAGEB10', 'OR8S1', 'PSG7', 'SUN3', 'SPRR1B', 'PRAMEF8', 'CELA2B', 'PLA2G2F', 'CRYAA', 'KLHL40', 'OR2AG1', 'MC2R', 'USP26', 'HIST1H4F', 'DMBT1P1', 'OR8G5', 'OR10K1', 'NPPC', 'PSAPL1', 'SNORD89', 'SLC5A7', 'C1ORF87', 'ALOX12B', 'TUSC7', 'HBBP1', 'LOC391003', 'C15ORF43', 'SFTA3', 'CAPZA3', 'XAGE5', 'LOC391343', 'LINC00636', 'TBC1D28', 'KRT39', 'C20ORF173', 'C22ORF42', 'BMP10', 'SNORA34', 'IFITM5', 'SNORA70B', 'OR4S1', 'PIWIL3', 'C4ORF51', 'TAS2R60', 'CCKBR', 'OR5B2', 'CASC8', 'IQCF2', 'ARR3', 'KRTAP19-1', 'PROKR1', 'FMR1NB', 'NXF2B', 'ARHGAP36', 'P2RX3', 'TTTY15', 'OPN1MW', 'PPBPP1', 'CHODL-AS1', 'PF4', 'KHDC1L', 'LYZL6', 'TEX33', 'OR1B1', 'HBD', 'FAM153C', 'TKTL2', 'ANKRD18DP', 'MYBPHL', 'AKAP14', 'EDDM3A', 'SYT10', 'ACOT12', 'GAGE1', 'C11ORF94', 'CSH2', 'SERPINB4', 'BRDTP1', 'LGI3', 'PRB1', 'SNORA54', 'PRAP1', 'SNORA51', 'OR10S1', 'SFTPC', 'OTP', 'IGF2BP2-AS1', 'SPACA7', 'KCNQ1DN', 'DMRT1', 'YWHAEP7', 'CYP3A4', 'PRSS1', 'ZAR1L', 'C17ORF64', 'GAGE2D', 'FBP2', 'IFNA13', 'KRTAP19-3', 'SLC13A1', 'LHX9', 'CYP2W1', 'LINC00469', 'LOC646813', 'FOXE1', 'C9ORF135', 'OR4K2', 'OTOL1', 'HPD', 'OLIG1', 'PLET1', 'LCNL1', 'CRLF2', 'NEU2', 'GABRG3', 'FCAMR', 'CCDC166', 'SVOP', 'FERD3L', 'FDCSP', 'HAND1', 'NPHS2', 'GH1', 'FAM71C', 'C3ORF49', 'USP17L6P', 'XKR7', 'LINC01101', 'FAM27L', 'VRTN', 'SATB2-AS1', 'SCARNA20', 'CNTNAP5', 'ZFAT-AS1', 'ACSM2A', 'OLAH', 'PTF1A', 'C17ORF78', 'PRDM14', 'HOXC12', 'DNAJC5G', 'LCE1D', 'FMO6P', 'PISRT1', 'TMEM207', 'LINC00696', 'GDNF', 'OR13H1', 'CRNN', 'OR51I2', 'AVPR1B', 'CLDN22', 'SPANXN1', 'ZNF479', 'OR5H6', 'LPO', 'FGA', 'OR6M1', 'PRKAG3', 'OR4D6', 'OR7E24', 'CELA2A', 'IL26', 'HFE2', 'UCMA', 'SCGB1A1', 'OR1L1', 'PWRN2', 'SCN1A', 'MYBPC2', 'FTMT', 'BARHL2', 'OPRD1', 'GYS2', 'IVL', 'OR1K1', 'DEFB110', 'ADAM18', 'EPS8L3', 'CCKAR', 'LOC285627', 'HBZ', 'SLC1A6', 'KRTAP21-1', 'CER1', 'SBSN', 'GABRA6', 'LOC729609', 'PRG1', 'SERPINI2', 'CPLX3', 'FAM27B', 'LMNTD1', 'TFF2', 'CT45A1', 'OR4C12', 'OR4D2', 'SCARNA11', 'POM121L2', 'OR56B1', 'NKX2-1', 'CLCA4', 'HBG2', 'LINC00488', 'SNORA59B', 'OR8D4', 'CYP7A1', 'FOXN3-AS2', 'GBX2', 'GAGE2B', 'LINC00608', 'CGB8', 'OR2M4', 'OR52A4P', 'DRGX', 'HTR3E', 'SNORA38B', 'ANP32D', 'LYZL1', 'CCL24', 'HTR5A', 'SLITRK3', 'YIPF7', 'TSPY1', 'SLC25A31', 'RAX', 'ALLC', 'SYCN', 'SNORA44', 'TARM1', 'HMHB1', 'SLC35G3', 'TMEM88B', 'OR6C74', 'ALX4', 'SPACA3', 'LINC00923', 'A1CF', 'OR6F1', 'CD200R1L', 'SLC51B', 'TSPY2', 'FRMPD2B', 'OR9A2', 'KRT13', 'SNORD94', 'TSKS', 'OR8J3', 'NPBWR2', 'ARL5C', 'OR2T29', 'DYDC1', 'GDPD2', 'ARID3C', 'LINC00602', 'NKX2-6', 'LINC00934', 'OR11H4', 'GOLGA8EP', 'OR13C3', 'PLG', 'TRHR', 'LINC00895', 'MAP3K15', 'MAGEA9B', 'ITLN2', 'POU6F2', 'SRY', 'RAX2', 'OR1N1', 'LINC00575', 'SSX5', 'SNORA37', 'TPTE2', 'CNTN5', 'TCERG1L', 'DPPA2', 'NTS', 'ADGRG4', 'ZIM3', 'BMP15', 'ZCCHC13', 'POTED', 'MUSK', 'SNORA71A', 'KIR3DL3', 'LINC00304', 'KCNK4', 'GRIN2B', 'APOC3', 'IQCF3', 'C2ORF83', 'MYH1', 'C18ORF42', 'TRPM1', 'GPR22', 'IL36RN', 'ALPPL2', 'GAGE2C', 'GAGE12F', 'KCNMB2', 'SNORD116-19', 'TPD52L3', 'OR2L8', 'C20ORF166-AS1', 'NLRP8', 'SNORA74A', 'SNORA76C', 'OR2A14', 'OR4F15', 'CFHR4', 'OR2AT4', 'OR11H6', 'SPANXN3', 'CPLX4', 'SOX3', 'FAM170B', 'DAOA', 'CYP2C18', 'LINC01312', 'CSN3', 'EDDM3B', 'GUCA2B', 'ITIH1', 'USH1C', 'F13B', 'ZNF705A', 'FFAR1', 'GPR52', 'SYCP1', 'ARSF', 'EPPIN', 'DNMT3L', 'PRAMEF14', 'MUC2', 'MTVR2', 'LRRC30', 'SPATA31C1', 'MAGEA1', 'ADAM29', 'TRIM48', 'OR52N5', 'CXADRP2', 'BPIFB3', 'DUSP21', 'OR2T10', 'FAM205A', 'SLC32A1', 'DMP1', 'FOXD4L3', 'PPIAL4E', 'MMP23A', 'PSKH2', 'BTN1A1', 'OR5C1', 'C6ORF10', 'ACER1', 'NKAIN3', 'AATK-AS1', 'SPINK1', 'IFNA14', 'MORC1', 'TRIM75P', 'LOC647859', 'TTTY2', 'TMIGD1', 'SPOCK3', 'CHRNB3', 'BET1P1', 'GCSAML-AS1', 'CSNK1A1P1', 'OR2A2', 'SCARNA8', 'FAM19A4', 'ADGRG7', 'KRTAP4-3', 'OR9G4', 'TMEM72', 'CRYGC', 'PAGE5', 'ODAM', 'OR1S2', 'KRTAP1-5', 'REC114', 'KRTAP1-1', 'TREML4', 'IQCF6', 'TMEM14E', 'KRTAP12-2', 'PPY2P', 'ZFY', 'TSPAN19', 'IQCJ', 'KRT83', 'RFX6', 'PLA2G12B', 'DMRTC1', 'SNORD115-26', 'OR6C4', 'COL6A4P1', 'DCT', 'VWC2L', 'SH2D7', 'HCRTR1', 'NUTM1', 'OR52A5', 'KRT3', 'TPTE', 'REG4', 'AADACL3', 'OR2G6', 'CT47A1', 'CLEC4G', 'OR6S1', 'SNORA16B', 'CGB5', 'BTF3P11', 'SPATA3', 'MAGEA5', 'LINC01020', 'SPDYC', 'KLRC4', 'S100G', 'KRTAP11-1', 'RAPGEF4-AS1', 'LOC400736', 'NF1P2', 'NXPE1', 'KRT85', 'FRMPD4', 'TSGA13', 'RPE65', 'TRPV5', 'LOC100129935', 'ANKRD34C', 'EPB42', 'CA6', 'OR2F1', 'APCS', 'CHIAP2', 'FOXG1', 'KCNJ16', 'ASB15', 'IHH', 'AKR1D1', 'OACYLP', 'GNAS-AS1', 'KRT74', 'KRTAP3-2', 'LOC400940', 'SDR16C6P', 'B3GNT6', 'IFNL1', 'PCGEM1', 'MAGEA12', 'POTEH', 'COX7B2', 'TCP10L2', 'CPA2', 'LINC00303', 'C2ORF27B', 'MAGEB3', 'PCP4', 'DEFB126', 'GFI1B', 'CTRB1', 'C1ORF146', 'UGT1A4', 'CNGA2', 'SLC22A10', 'DISC2', 'SPANXA2', 'INSM2', 'MTNR1B', 'LY6G6D', 'C15ORF32', 'TSPEAR-AS2', 'PRR32', 'TMPRSS11F', 'PRSS48', 'FAM24A', 'GABRR3', 'OR2A12', 'GML', 'TMEM132D', 'LINC00113', 'RNASE8', 'HIST2H2AB', 'ZSCAN10', 'LINC01591', 'NKX6-2', 'ABRA', 'GLTPD2', 'SNORA72', 'OR6B1', 'WFDC8', 'FBXW12', 'LINC00691', 'MOS', 'LOC284661', 'TRIM55', 'LINC01142', 'OR4A16', 'RBM46', 'TLX3', 'HYPM', 'TAAR9', 'OR4D10', 'CNTNAP4', 'CABS1', 'PRAMEF16', 'VWA5B1', 'CRYGB', 'SNORA2B', 'LINC00452', 'GCG', 'SNORA27', 'CFC1B', 'SCGB3A2', 'PRAMEF5', 'FAM170A', 'OR51T1', 'CGB2', 'GSC2', 'HIST1H3A', 'CCK', 'LRRTM1', 'AGXT2', 'ADRB3', 'AIRE', 'GSTA5', 'OR4D5', 'OR10AD1', 'DUXA', 'MCF2', 'KRTAP12-1', 'MS4A10', 'RPL3L', 'LOC643923', 'AADAC', 'DEFB123', 'OR5B17', 'SERPINB3', 'ANKRD20A20P', 'SNCB', 'MYF5', 'HMSD', 'MT1B', 'CST9L', 'EPGN', 'ZG16', 'SNORD15B', 'TRIM15', 'RHAG', 'GABRB1', 'CLRN1', 'TBC1D3P2', 'ART1', 'OR4D1', 'PRLHR', 'KRTAP10-11', 'GRK1', 'HYMAI', 'MYADML', 'BANF2', 'USP50', 'B3GALT1', 'NPSR1-AS1', 'HRK', 'INS-IGF2', 'NHLH2', 'PABPC1L2A', 'SLC5A2', 'FAM47C', 'TRIM49', 'OR5T2', 'CEACAM22P', 'AQP2', 'MMD2', 'APOA5', 'PACRG-AS1', 'UTS2R', 'PRSS57', 'LINC00523', 'SPINK14', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.0842927056529414e-15 NRMSE: 6.829415912859905e-16 MAPE: 4.083862542380664e-12 Pearson Correlation: 0.08590017559171995 Spearman Correlation: 0.07319043878352599 Coefficient of Determination: -2.649433044947394 RMSE: 0.5271778747069713 NRMSE: 0.3368075252724673 MAPE: 729.3829073263349 Predictor: ElasticNet Pearson Correlation: 0.7140832722108549 Spearman Correlation: 0.7089699537890792 Coefficient of Determination: 0.44648577873214834 RMSE: 0.1693450324126174 NRMSE: 0.1066619422129254 MAPE: 513.9826410885407 Pearson Correlation: 0.32583141147677164 Spearman Correlation: 0.23519245875883743 Coefficient of Determination: 0.09837561675263384 RMSE: 0.2620337902762825 NRMSE: 0.1674101981039614 MAPE: 259.01784849067656 Predictor: RandomForests Pearson Correlation: 0.5516661647708384 Spearman Correlation: 0.5693334738160837 Coefficient of Determination: 0.27298838263446545 RMSE: 0.19407908907482221 NRMSE: 0.12224068393808715 MAPE: 514.8189533782679 Pearson Correlation: 0.3447849592704686 Spearman Correlation: 0.32486439980548387 Coefficient of Determination: 0.11531453622095 RMSE: 0.25956069034263785 NRMSE: 0.16583016466863307 MAPE: 250.98184207749222 Protein: ERBB2 x_train_column_count: 701 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'BTNL3', 'F9', 'FAM183CP', 'LINC00111', 'KCNU1', 'LOC727924', 'CXORF51A', 'OR2M3', 'OR10T2', 'OR1S1', 'SOX1', 'SNORD15A', 'HBG1', 'OR10V1', 'FGF23', 'MS4A6E', 'WFDC5', 'GPR151', 'PRM3', 'SCGB1C1', 'CLEC6A', 'PRSS3P2', 'ASAP1-IT1', 'PPY', 'DNAJB8', 'CT47A11', 'TMEM252', 'OR10A5', 'MAGEB10', 'OR8S1', 'PSG7', 'SUN3', 'SPRR1B', 'PRAMEF8', 'CELA2B', 'PLA2G2F', 'CRYAA', 'KLHL40', 'OR2AG1', 'MC2R', 'USP26', 'HIST1H4F', 'DMBT1P1', 'OR8G5', 'OR10K1', 'NPPC', 'PSAPL1', 'SNORD89', 'SLC5A7', 'C1ORF87', 'ALOX12B', 'TUSC7', 'HBBP1', 'LOC391003', 'C15ORF43', 'SFTA3', 'CAPZA3', 'XAGE5', 'LOC391343', 'LINC00636', 'TBC1D28', 'KRT39', 'C20ORF173', 'C22ORF42', 'BMP10', 'SNORA34', 'IFITM5', 'SNORA70B', 'OR4S1', 'PIWIL3', 'C4ORF51', 'TAS2R60', 'CCKBR', 'OR5B2', 'CASC8', 'IQCF2', 'ARR3', 'KRTAP19-1', 'PROKR1', 'FMR1NB', 'NXF2B', 'ARHGAP36', 'P2RX3', 'TTTY15', 'OPN1MW', 'PPBPP1', 'CHODL-AS1', 'PF4', 'KHDC1L', 'LYZL6', 'TEX33', 'OR1B1', 'HBD', 'FAM153C', 'TKTL2', 'ANKRD18DP', 'MYBPHL', 'AKAP14', 'EDDM3A', 'SYT10', 'ACOT12', 'GAGE1', 'C11ORF94', 'CSH2', 'SERPINB4', 'BRDTP1', 'LGI3', 'PRB1', 'SNORA54', 'PRAP1', 'SNORA51', 'OR10S1', 'SFTPC', 'OTP', 'IGF2BP2-AS1', 'SPACA7', 'KCNQ1DN', 'DMRT1', 'YWHAEP7', 'CYP3A4', 'PRSS1', 'ZAR1L', 'C17ORF64', 'GAGE2D', 'FBP2', 'IFNA13', 'KRTAP19-3', 'SLC13A1', 'LHX9', 'CYP2W1', 'LINC00469', 'LOC646813', 'FOXE1', 'C9ORF135', 'OR4K2', 'OTOL1', 'HPD', 'OLIG1', 'PLET1', 'LCNL1', 'CRLF2', 'NEU2', 'GABRG3', 'FCAMR', 'CCDC166', 'SVOP', 'FERD3L', 'FDCSP', 'HAND1', 'NPHS2', 'GH1', 'FAM71C', 'C3ORF49', 'USP17L6P', 'XKR7', 'LINC01101', 'FAM27L', 'VRTN', 'SATB2-AS1', 'SCARNA20', 'CNTNAP5', 'ZFAT-AS1', 'ACSM2A', 'OLAH', 'PTF1A', 'C17ORF78', 'PRDM14', 'HOXC12', 'DNAJC5G', 'LCE1D', 'FMO6P', 'PISRT1', 'TMEM207', 'LINC00696', 'GDNF', 'OR13H1', 'CRNN', 'OR51I2', 'AVPR1B', 'CLDN22', 'SPANXN1', 'ZNF479', 'OR5H6', 'LPO', 'FGA', 'OR6M1', 'PRKAG3', 'OR4D6', 'OR7E24', 'CELA2A', 'IL26', 'HFE2', 'UCMA', 'SCGB1A1', 'OR1L1', 'PWRN2', 'SCN1A', 'MYBPC2', 'FTMT', 'BARHL2', 'OPRD1', 'GYS2', 'IVL', 'OR1K1', 'DEFB110', 'ADAM18', 'EPS8L3', 'CCKAR', 'LOC285627', 'HBZ', 'SLC1A6', 'KRTAP21-1', 'CER1', 'SBSN', 'GABRA6', 'LOC729609', 'PRG1', 'SERPINI2', 'CPLX3', 'FAM27B', 'LMNTD1', 'TFF2', 'CT45A1', 'OR4C12', 'OR4D2', 'SCARNA11', 'POM121L2', 'OR56B1', 'NKX2-1', 'CLCA4', 'HBG2', 'LINC00488', 'SNORA59B', 'OR8D4', 'CYP7A1', 'FOXN3-AS2', 'GBX2', 'GAGE2B', 'LINC00608', 'CGB8', 'OR2M4', 'OR52A4P', 'DRGX', 'HTR3E', 'SNORA38B', 'ANP32D', 'LYZL1', 'CCL24', 'HTR5A', 'SLITRK3', 'YIPF7', 'TSPY1', 'SLC25A31', 'RAX', 'ALLC', 'SYCN', 'SNORA44', 'TARM1', 'HMHB1', 'SLC35G3', 'TMEM88B', 'OR6C74', 'ALX4', 'SPACA3', 'LINC00923', 'A1CF', 'OR6F1', 'CD200R1L', 'SLC51B', 'TSPY2', 'FRMPD2B', 'OR9A2', 'KRT13', 'SNORD94', 'TSKS', 'OR8J3', 'NPBWR2', 'ARL5C', 'OR2T29', 'DYDC1', 'GDPD2', 'ARID3C', 'LINC00602', 'NKX2-6', 'LINC00934', 'OR11H4', 'GOLGA8EP', 'OR13C3', 'PLG', 'TRHR', 'LINC00895', 'MAP3K15', 'MAGEA9B', 'ITLN2', 'POU6F2', 'SRY', 'RAX2', 'OR1N1', 'LINC00575', 'SSX5', 'SNORA37', 'TPTE2', 'CNTN5', 'TCERG1L', 'DPPA2', 'NTS', 'ADGRG4', 'ZIM3', 'BMP15', 'ZCCHC13', 'POTED', 'MUSK', 'SNORA71A', 'KIR3DL3', 'LINC00304', 'KCNK4', 'GRIN2B', 'APOC3', 'IQCF3', 'C2ORF83', 'MYH1', 'C18ORF42', 'TRPM1', 'GPR22', 'IL36RN', 'ALPPL2', 'GAGE2C', 'GAGE12F', 'KCNMB2', 'SNORD116-19', 'TPD52L3', 'OR2L8', 'C20ORF166-AS1', 'NLRP8', 'SNORA74A', 'SNORA76C', 'OR2A14', 'OR4F15', 'CFHR4', 'OR2AT4', 'OR11H6', 'SPANXN3', 'CPLX4', 'SOX3', 'FAM170B', 'DAOA', 'CYP2C18', 'LINC01312', 'CSN3', 'EDDM3B', 'GUCA2B', 'ITIH1', 'USH1C', 'F13B', 'ZNF705A', 'FFAR1', 'GPR52', 'SYCP1', 'ARSF', 'EPPIN', 'DNMT3L', 'PRAMEF14', 'MUC2', 'MTVR2', 'LRRC30', 'SPATA31C1', 'MAGEA1', 'ADAM29', 'TRIM48', 'OR52N5', 'CXADRP2', 'BPIFB3', 'DUSP21', 'OR2T10', 'FAM205A', 'SLC32A1', 'DMP1', 'FOXD4L3', 'PPIAL4E', 'MMP23A', 'PSKH2', 'BTN1A1', 'OR5C1', 'C6ORF10', 'ACER1', 'NKAIN3', 'AATK-AS1', 'SPINK1', 'IFNA14', 'MORC1', 'TRIM75P', 'LOC647859', 'TTTY2', 'TMIGD1', 'SPOCK3', 'CHRNB3', 'BET1P1', 'GCSAML-AS1', 'CSNK1A1P1', 'OR2A2', 'SCARNA8', 'FAM19A4', 'ADGRG7', 'KRTAP4-3', 'OR9G4', 'TMEM72', 'CRYGC', 'PAGE5', 'ODAM', 'OR1S2', 'KRTAP1-5', 'REC114', 'KRTAP1-1', 'TREML4', 'IQCF6', 'TMEM14E', 'KRTAP12-2', 'PPY2P', 'ZFY', 'TSPAN19', 'IQCJ', 'KRT83', 'RFX6', 'PLA2G12B', 'DMRTC1', 'SNORD115-26', 'OR6C4', 'COL6A4P1', 'DCT', 'VWC2L', 'SH2D7', 'HCRTR1', 'NUTM1', 'OR52A5', 'KRT3', 'TPTE', 'REG4', 'AADACL3', 'OR2G6', 'CT47A1', 'CLEC4G', 'OR6S1', 'SNORA16B', 'CGB5', 'BTF3P11', 'SPATA3', 'MAGEA5', 'LINC01020', 'SPDYC', 'KLRC4', 'S100G', 'KRTAP11-1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 5.599338519626898e-15 NRMSE: 9.539394721411483e-16 MAPE: 1.0034505352767168e-11 Pearson Correlation: 0.28726637065988325 Spearman Correlation: 0.18466315041334683 Coefficient of Determination: -7.288055140344014 RMSE: 2.4980783958014494 NRMSE: 0.5527333545306892 MAPE: 2968.3158677911365 Predictor: ElasticNet Pearson Correlation: 0.9377044093620469 Spearman Correlation: 0.8705496947065261 Coefficient of Determination: 0.8665938654663805 RMSE: 0.3754458925824246 NRMSE: 0.06396338698441566 MAPE: 381.1472795735649 Pearson Correlation: 0.7161786936726399 Spearman Correlation: 0.5614459033155027 Coefficient of Determination: 0.512352250596211 RMSE: 0.6059445165168549 NRMSE: 0.13407335247634802 MAPE: 286.9491581206602 Predictor: RandomForests Pearson Correlation: 0.8485803747583326 Spearman Correlation: 0.6648252772453114 Coefficient of Determination: 0.7165601763337733 RMSE: 0.5472551934814445 NRMSE: 0.09323392907328219 MAPE: 541.4799700994992 Pearson Correlation: 0.7888975125440271 Spearman Correlation: 0.6103510590429463 Coefficient of Determination: 0.6089427981744895 RMSE: 0.5426251161229562 NRMSE: 0.12006308576677867 MAPE: 283.6435280163146 Protein: ERBB3 x_train_column_count: 249 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.7297797616634306 Spearman Correlation: 0.6944094977057772 Coefficient of Determination: 0.5325655639676676 RMSE: 0.3205900516893861 NRMSE: 0.0865180534964218 MAPE: 177.66354056873064 Pearson Correlation: 0.05951002510718941 Spearman Correlation: 0.214498933901919 Coefficient of Determination: -6.662696267072153 RMSE: 1.1542371345885805 NRMSE: 0.5584550011556678 MAPE: 538.2889321696689 Predictor: ElasticNet Pearson Correlation: 0.602818491127124 Spearman Correlation: 0.5787688530091013 Coefficient of Determination: 0.34064797822780357 RMSE: 0.3807574071268104 NRMSE: 0.1027554958282783 MAPE: 195.19126972655405 Pearson Correlation: 0.4979338603748124 Spearman Correlation: 0.5435903190812854 Coefficient of Determination: 0.21072183150941115 RMSE: 0.37044119965580724 NRMSE: 0.17923070951588282 MAPE: 193.6072962830104 Predictor: RandomForests Pearson Correlation: 0.5303702877096366 Spearman Correlation: 0.5175725645346669 Coefficient of Determination: 0.26179029274883236 RMSE: 0.4028835780714043 NRMSE: 0.10872671430922509 MAPE: 257.828882651883 Pearson Correlation: 0.4791482378587275 Spearman Correlation: 0.5399809982412606 Coefficient of Determination: 0.20483913647592789 RMSE: 0.37181913409778977 NRMSE: 0.17989739607216318 MAPE: 227.00814447623196
Min-Max
scenario = Scenario.NMostVariableGenes_Mutations
normalizeTechnique = NormalizeTechnique.MinMax
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.266811 | 0.102965 | 0.232299 | 0.000000 | 0.0 | 0.00000 | 0.165596 | 0.256402 | 0.0 | 0.00000 | ... | 0.362558 | 0.154626 | 0.343226 | 0.136973 | 0.283236 | 0.203583 | 0.106969 | 0.050188 | 0.019658 | 0.021305 |
| TCGA-A1-A0SH-01 | 0.074647 | 0.046655 | 0.060467 | 0.000000 | 0.0 | 0.00000 | 0.019946 | 0.108076 | 0.0 | 0.00000 | ... | 0.437102 | 0.171136 | 0.196632 | 0.028737 | 0.498917 | 0.208787 | 0.168174 | 0.119445 | 0.172767 | 0.000000 |
| TCGA-A1-A0SJ-01 | 0.122769 | 0.097168 | 0.035285 | 0.088368 | 0.0 | 0.00000 | 0.020200 | 0.129369 | 0.0 | 0.29443 | ... | 0.415293 | 0.914898 | 0.215818 | 0.074090 | 0.379839 | 0.104565 | 0.110857 | 0.079787 | 0.016343 | 0.000000 |
| TCGA-A1-A0SK-01 | 0.716855 | 1.000000 | 0.116251 | 0.076144 | 0.0 | 0.01449 | 0.000000 | 0.094313 | 0.0 | 0.00000 | ... | 0.334733 | 0.181185 | 0.763246 | 0.229344 | 0.511470 | 0.000000 | 0.246798 | 0.166438 | 0.018601 | 0.000000 |
| TCGA-A1-A0SQ-01 | 0.025757 | 0.011574 | 0.044865 | 0.000000 | 0.0 | 0.00000 | 0.022276 | 0.153652 | 0.0 | 0.00000 | ... | 0.537294 | 0.183640 | 0.239462 | 0.036770 | 0.323545 | 0.099038 | 0.071604 | 0.075950 | 0.006561 | 0.000000 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 371 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.8291847527807681 Spearman Correlation: 0.7398971426020816 Coefficient of Determination: 0.6875473542441033 RMSE: 0.12526729672948506 NRMSE: 0.047440748619384604 MAPE: 557.634180761792 Pearson Correlation: 0.09708844807007722 Spearman Correlation: 0.1375963320651644 Coefficient of Determination: -1.0764692824495685 RMSE: 0.4041507274120109 NRMSE: 0.19965652490676003 MAPE: 535.7719535848273 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: RandomForests Pearson Correlation: 0.5774352883015229 Spearman Correlation: 0.4146223528222209 Coefficient of Determination: 0.18356685781928717 RMSE: 0.20249108863332196 NRMSE: 0.07668664595088882 MAPE: 212.2091029127584 Pearson Correlation: 0.1920581277680577 Spearman Correlation: 0.24579065457028587 Coefficient of Determination: -0.007074799676827004 RMSE: 0.28145662370983715 NRMSE: 0.13904379626319002 MAPE: 128.882750583963 Protein: CDH1 x_train_column_count: 836 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 5.808626811048573e-15 NRMSE: 9.763546654309874e-16 MAPE: 5.551216105812379e-12 Pearson Correlation: 0.45959078461174613 Spearman Correlation: 0.49638084089357143 Coefficient of Determination: -0.5364449750269655 RMSE: 1.4382380904323366 NRMSE: 0.23294322996215489 MAPE: 880.7712782891066 Predictor: ElasticNet Pearson Correlation: 0.701730462991032 Spearman Correlation: 0.6768816041079725 Coefficient of Determination: 0.40741128192441367 RMSE: 0.8686641349965406 NRMSE: 0.14601115005068505 MAPE: 394.50896409196866 Pearson Correlation: 0.69233585958734 Spearman Correlation: 0.6268461613501123 Coefficient of Determination: 0.40829240990582605 RMSE: 0.8925362233327442 NRMSE: 0.1445590073746792 MAPE: 261.41020007804514 Predictor: RandomForests Pearson Correlation: 0.7538582144176262 Spearman Correlation: 0.6992369925408993 Coefficient of Determination: 0.5614276548294443 RMSE: 0.7473014467100612 NRMSE: 0.12561165964232113 MAPE: 212.87414455774046 Pearson Correlation: 0.758652351304768 Spearman Correlation: 0.6760153594963559 Coefficient of Determination: 0.5682524452778982 RMSE: 0.7624076125549784 NRMSE: 0.12348281762090285 MAPE: 127.5955338384151 Protein: CDH2 x_train_column_count: 474 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.9599887121010388 Spearman Correlation: 0.9401739905292915 Coefficient of Determination: 0.9215783273614113 RMSE: 0.10394881419051163 NRMSE: 0.03840184943883956 MAPE: 718.5408043523353 Pearson Correlation: 0.04529660488879918 Spearman Correlation: 0.08728904497122232 Coefficient of Determination: -6.176433696935291 RMSE: 1.0048905408262174 NRMSE: 0.518599649494874 MAPE: 927.1113329354853 Predictor: ElasticNet Pearson Correlation: 0.14355741657293344 Spearman Correlation: 0.14363782215177615 Coefficient of Determination: 0.00021679678934838353 RMSE: 0.37115422355717675 NRMSE: 0.13711564410451066 MAPE: 454.64306818332744 Pearson Correlation: 0.045443603978313846 Spearman Correlation: 0.09462003706955419 Coefficient of Determination: -0.00022059428765075495 RMSE: 0.375156362190072 NRMSE: 0.19360910470664808 MAPE: 105.29410893649612 Predictor: RandomForests Pearson Correlation: 0.5655487494912812 Spearman Correlation: 0.5312016864238138 Coefficient of Determination: 0.17181386215244132 RMSE: 0.33780452860181215 NRMSE: 0.12479525378086578 MAPE: 273.3107642405301 Pearson Correlation: 0.09068431158886454 Spearman Correlation: 0.19681982245634574 Coefficient of Determination: 0.0075649601983969195 RMSE: 0.37369343176106185 NRMSE: 0.1928541217737843 MAPE: 108.57572484937619 Protein: CDH3 x_train_column_count: 75 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.5513408664257738 Spearman Correlation: 0.5483606636933942 Coefficient of Determination: 0.30397675099112287 RMSE: 0.17419749067667722 NRMSE: 0.12221297824877732 MAPE: 471.6926141872558 Pearson Correlation: 0.40228668022566366 Spearman Correlation: 0.475719442005658 Coefficient of Determination: 0.11093099324031086 RMSE: 0.19289877866864025 NRMSE: 0.14764431858052388 MAPE: 315.66907109210615 Predictor: ElasticNet Pearson Correlation: 0.34986218103665956 Spearman Correlation: 0.35953079118664155 Coefficient of Determination: 0.019243907857821818 RMSE: 0.2067809511791429 NRMSE: 0.14507278945609736 MAPE: 113.85475272414556 Pearson Correlation: 0.4326734355354927 Spearman Correlation: 0.4386889083991806 Coefficient of Determination: 0.026515269070147784 RMSE: 0.20184886630375307 NRMSE: 0.15449469679049763 MAPE: 117.28528723993337 Predictor: RandomForests Pearson Correlation: 0.5040026786872635 Spearman Correlation: 0.5313296241915906 Coefficient of Determination: 0.22062795663433876 RMSE: 0.18433272066051076 NRMSE: 0.12932362396903993 MAPE: 419.01385703014614 Pearson Correlation: 0.41281900763225626 Spearman Correlation: 0.4692078821578384 Coefficient of Determination: 0.16189419358089985 RMSE: 0.18728852408637184 NRMSE: 0.14335024154914378 MAPE: 305.96288100113867 Protein: PTEN x_train_column_count: 886 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 2.7337929735547737e-15 NRMSE: 4.2745570691185576e-16 MAPE: 3.0100620392203646e-12 Pearson Correlation: 0.19462088772916947 Spearman Correlation: 0.1874597600234124 Coefficient of Determination: -2.5363919807124287 RMSE: 0.933995806915997 NRMSE: 0.30782275621778293 MAPE: 517.1279791344533 Predictor: ElasticNet Pearson Correlation: 0.48861440278026036 Spearman Correlation: 0.46561663758629956 Coefficient of Determination: 0.13535428934464078 RMSE: 0.5825352802658917 NRMSE: 0.09108518181000574 MAPE: 460.45960514374104 Pearson Correlation: 0.1982414794315036 Spearman Correlation: 0.2583260169739538 Coefficient of Determination: 0.036418984533811205 RMSE: 0.4875384198725983 NRMSE: 0.16068104273699765 MAPE: 154.1500415087992 Predictor: RandomForests Pearson Correlation: 0.6079067266956076 Spearman Correlation: 0.5506233025481305 Coefficient of Determination: 0.3059348455984082 RMSE: 0.5219191808099048 NRMSE: 0.08160725210068093 MAPE: 290.03366899787113 Pearson Correlation: 0.2814536999286226 Spearman Correlation: 0.31190942186630216 Coefficient of Determination: 0.06135241981824835 RMSE: 0.4811893541385281 NRMSE: 0.15858854200070135 MAPE: 174.46055958840165 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.860476172698356 Spearman Correlation: 0.8129275857136872 Coefficient of Determination: 0.7404192437816104 RMSE: 0.10068107896740573 NRMSE: 0.0651294935941196 MAPE: 273.2739876590816 Pearson Correlation: 0.176776259589048 Spearman Correlation: 0.13024842728576078 Coefficient of Determination: -2.560234331055414 RMSE: 0.3485681437034204 NRMSE: 0.34884722148060493 MAPE: 461.1513877875395 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: RandomForests Pearson Correlation: 0.5177669672832886 Spearman Correlation: 0.523125617010205 Coefficient of Determination: 0.21322561467551449 RMSE: 0.1752817581045173 NRMSE: 0.1133878605465678 MAPE: 178.40744518979125 Pearson Correlation: 0.3556275559394979 Spearman Correlation: 0.3442253734094031 Coefficient of Determination: 0.11222295820798112 RMSE: 0.17406055207067747 NRMSE: 0.1741999120002777 MAPE: 153.41840350818504 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 4.694962575872795e-15 NRMSE: 1.061368277579472e-15 MAPE: 2.7291536175423892e-12 Pearson Correlation: 0.23967218201743004 Spearman Correlation: 0.20191200858452837 Coefficient of Determination: -4.165129880753286 RMSE: 1.6973940476116238 NRMSE: 0.45838348571742477 MAPE: 846.938584018417 Predictor: ElasticNet Pearson Correlation: 0.4713552716389777 Spearman Correlation: 0.3757547071245926 Coefficient of Determination: 0.14645373520765137 RMSE: 0.593788512291423 NRMSE: 0.13423499769219463 MAPE: 161.51629854590897 Pearson Correlation: 0.524198966032349 Spearman Correlation: 0.3668568920105356 Coefficient of Determination: 0.1485641422389552 RMSE: 0.6891567586727467 NRMSE: 0.18610768530184899 MAPE: 354.84723782670113 Predictor: RandomForests Pearson Correlation: 0.6541305386823169 Spearman Correlation: 0.6132472433488344 Coefficient of Determination: 0.4157310370569892 RMSE: 0.4912750025092552 NRMSE: 0.11106024697846843 MAPE: 172.18973686908527 Pearson Correlation: 0.6988379091845354 Spearman Correlation: 0.6171332274090378 Coefficient of Determination: 0.4469766852828647 RMSE: 0.5554100987300212 NRMSE: 0.1499892246097816 MAPE: 278.5683736894839 Protein: TP53 x_train_column_count: 1001 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.801555620106396e-15 NRMSE: 4.3296217738678115e-16 MAPE: 4.937717421388165e-12 Pearson Correlation: 0.3362815777818592 Spearman Correlation: 0.3841430104380061 Coefficient of Determination: -0.8641939835216788 RMSE: 0.5743195882047223 NRMSE: 0.20652291999162944 MAPE: 1046.557763189288 Predictor: ElasticNet Pearson Correlation: 0.48748623297728966 Spearman Correlation: 0.4727241462554703 Coefficient of Determination: 0.18427853520959003 RMSE: 0.4089744089058369 NRMSE: 0.0982875291770817 MAPE: 542.8871824260805 Pearson Correlation: 0.529872273050651 Spearman Correlation: 0.4707589503463077 Coefficient of Determination: 0.22142890973382356 RMSE: 0.3711566230859456 NRMSE: 0.13346636811318122 MAPE: 598.3212603557769 Predictor: RandomForests Pearson Correlation: 0.6530591557775642 Spearman Correlation: 0.5980284463118771 Coefficient of Determination: 0.36868372481543554 RMSE: 0.35978966242126675 NRMSE: 0.08646711425649287 MAPE: 608.440839032735 Pearson Correlation: 0.4919579374581136 Spearman Correlation: 0.4747244171300362 Coefficient of Determination: 0.24067670404353358 RMSE: 0.3665400544434684 NRMSE: 0.13180626935289597 MAPE: 405.50694494350495 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 3.145719623240271e-15 NRMSE: 6.340003674628194e-16 MAPE: 3.241293234738837e-12 Pearson Correlation: 0.33609676394628685 Spearman Correlation: 0.34401034045458984 Coefficient of Determination: -0.4733573049971116 RMSE: 0.9115270348026838 NRMSE: 0.22615169820936928 MAPE: 514.6265203610645 Predictor: ElasticNet Pearson Correlation: 0.5654294979176141 Spearman Correlation: 0.5629712624141356 Coefficient of Determination: 0.21180897517766117 RMSE: 0.6545182876090692 NRMSE: 0.13191411967855154 MAPE: 663.5293372265993 Pearson Correlation: 0.49481112450054177 Spearman Correlation: 0.4443810359964882 Coefficient of Determination: 0.1663474798035286 RMSE: 0.6856587888185416 NRMSE: 0.17011333022838823 MAPE: 322.0497289640768 Predictor: RandomForests Pearson Correlation: 0.6645895860474808 Spearman Correlation: 0.6562140464878917 Coefficient of Determination: 0.2710389057929081 RMSE: 0.6294456229093188 NRMSE: 0.1268608789143477 MAPE: 567.1492765556733 Pearson Correlation: 0.5007887164433864 Spearman Correlation: 0.43379182518778664 Coefficient of Determination: 0.15544485562653876 RMSE: 0.6901277954450372 NRMSE: 0.1712220997978061 MAPE: 312.88766939114953 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.9488554747092095 Spearman Correlation: 0.8662073037883978 Coefficient of Determination: 0.9003267118856395 RMSE: 0.1527001927851586 NRMSE: 0.03685116991702068 MAPE: 38.91078000647225 Pearson Correlation: 0.5967779897750507 Spearman Correlation: 0.4439127889961956 Coefficient of Determination: 0.19596121351712215 RMSE: 0.4815541717124881 NRMSE: 0.17152419295191026 MAPE: 69.59802421358717 Predictor: ElasticNet Pearson Correlation: 0.6623779683605396 Spearman Correlation: 0.6279286223937566 Coefficient of Determination: 0.35571515467351267 RMSE: 0.38823005255471854 NRMSE: 0.09369164093798261 MAPE: 85.42722264818178 Pearson Correlation: 0.7227883876180188 Spearman Correlation: 0.6077358306506683 Coefficient of Determination: 0.379647552244454 RMSE: 0.4229859089984207 NRMSE: 0.1506628349059379 MAPE: 61.47727280787769 Predictor: RandomForests Pearson Correlation: 0.8587570249665001 Spearman Correlation: 0.7210004911564247 Coefficient of Determination: 0.7303066641016753 RMSE: 0.25118014120938864 NRMSE: 0.060617356760718354 MAPE: 54.17614982505702 Pearson Correlation: 0.8407626682528961 Spearman Correlation: 0.7067926632336369 Coefficient of Determination: 0.7029651029759798 RMSE: 0.29269168672349505 NRMSE: 0.10425349482582191 MAPE: 43.39863490086028 Protein: CCND1 x_train_column_count: 859 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.0157803986874209e-15 NRMSE: 6.106578006080371e-16 MAPE: 2.2191325250650887e-12 Pearson Correlation: 0.3694520537617822 Spearman Correlation: 0.3150082918739635 Coefficient of Determination: -1.6550809242786557 RMSE: 0.3828330087675141 NRMSE: 0.2726575471251738 MAPE: 1973.041574199652 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: RandomForests Pearson Correlation: 0.5675328824948965 Spearman Correlation: 0.5437008822002752 Coefficient of Determination: 0.2610724039695447 RMSE: 0.20535543292136632 NRMSE: 0.12345374765324833 MAPE: 321.4978117037175 Pearson Correlation: 0.5056897104845651 Spearman Correlation: 0.4937079309335676 Coefficient of Determination: 0.22789258941074286 RMSE: 0.20644737053815404 NRMSE: 0.14703390870759075 MAPE: 1019.4300238341643 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 8.895628068055658e-15 NRMSE: 1.5155166478790499e-15 MAPE: 1.7526618743709454e-11 Pearson Correlation: 0.30684422743377504 Spearman Correlation: 0.2314115696029656 Coefficient of Determination: -1.6996127496303184 RMSE: 1.490312717093449 NRMSE: 0.2763420576846744 MAPE: 1125.548561423725 Predictor: ElasticNet Pearson Correlation: 0.7327786107107452 Spearman Correlation: 0.6176455944423902 Coefficient of Determination: 0.3693824640564538 RMSE: 0.8093113401027654 NRMSE: 0.13787950663624468 MAPE: 880.835572511422 Pearson Correlation: 0.6019547000889927 Spearman Correlation: 0.5099404936103795 Coefficient of Determination: 0.2833657473814748 RMSE: 0.7678483460776233 NRMSE: 0.14237870314808518 MAPE: 559.5698288714459 Predictor: RandomForests Pearson Correlation: 0.8528952673080121 Spearman Correlation: 0.6881736281446229 Coefficient of Determination: 0.7235299112107079 RMSE: 0.5358665893753556 NRMSE: 0.09129369292729707 MAPE: 470.1019264252636 Pearson Correlation: 0.7882440858943033 Spearman Correlation: 0.6523570535968691 Coefficient of Determination: 0.6168400332811796 RMSE: 0.561457303473134 NRMSE: 0.1041085302193833 MAPE: 379.5408772599159 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.7373251798753129 Spearman Correlation: 0.7242522405515768 Coefficient of Determination: 0.5436484208781622 RMSE: 0.3101652486350335 NRMSE: 0.08370469836081076 MAPE: 191.67855682217964 Pearson Correlation: 0.3126008557875987 Spearman Correlation: 0.3132527476013786 Coefficient of Determination: -0.14344840159157002 RMSE: 0.4977895451932205 NRMSE: 0.19974220964674036 MAPE: 281.72718518971493 Predictor: ElasticNet Pearson Correlation: 0.43686619752890515 Spearman Correlation: 0.4468792687493694 Coefficient of Determination: 0.10686820861904633 RMSE: 0.433911472241357 NRMSE: 0.1171002523947993 MAPE: 206.35448005886002 Pearson Correlation: 0.37387849282621677 Spearman Correlation: 0.3688108096905601 Coefficient of Determination: 0.08347541411258186 RMSE: 0.44566604319271497 NRMSE: 0.17882721943724117 MAPE: 235.34096025488225 Predictor: RandomForests Pearson Correlation: 0.5739938249286378 Spearman Correlation: 0.5330786526688833 Coefficient of Determination: 0.3019561377421488 RMSE: 0.38360540237758545 NRMSE: 0.10352408800437878 MAPE: 236.91679166445545 Pearson Correlation: 0.32784610677198583 Spearman Correlation: 0.35380150476642935 Coefficient of Determination: 0.08632050369056687 RMSE: 0.444973783885337 NRMSE: 0.17854944461243938 MAPE: 281.19013044355626 Fold: 2 Protein: RB1 x_train_column_count: 371 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.8735442324230008 Spearman Correlation: 0.7990027175083854 Coefficient of Determination: 0.7630795259994896 RMSE: 0.11440504529892478 NRMSE: 0.041839176893989465 MAPE: 407.19946226187653 Pearson Correlation: -0.03349243870368232 Spearman Correlation: 0.06473027021753976 Coefficient of Determination: -3.137234181449915 RMSE: 0.4981395182461264 NRMSE: 0.28539808083219304 MAPE: 1480.8235647427778 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: RandomForests Pearson Correlation: 0.608696241718142 Spearman Correlation: 0.4505157449079276 Coefficient of Determination: 0.2077545069546014 RMSE: 0.20920582355620668 NRMSE: 0.07650885881956067 MAPE: 170.95008724877755 Pearson Correlation: 0.16819661031103791 Spearman Correlation: 0.20744805384840506 Coefficient of Determination: 0.009143223603396922 RMSE: 0.24378185998497717 NRMSE: 0.13966945490768823 MAPE: 223.05222063555092 Protein: CDH1 x_train_column_count: 836 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 4.098543295287029e-15 NRMSE: 6.57502734464912e-16 MAPE: 4.103990245742505e-12 Pearson Correlation: 0.4476456576681859 Spearman Correlation: 0.3932738269437129 Coefficient of Determination: -0.5678578376905223 RMSE: 1.4407387278111683 NRMSE: 0.25585841374732166 MAPE: 619.6262025899723 Predictor: ElasticNet Pearson Correlation: 0.6973863834326812 Spearman Correlation: 0.6447853565137284 Coefficient of Determination: 0.39613437252750194 RMSE: 0.8708026445340582 NRMSE: 0.13969722379627147 MAPE: 376.63234890025865 Pearson Correlation: 0.6813678298191918 Spearman Correlation: 0.7097502682665107 Coefficient of Determination: 0.3689389378230984 RMSE: 0.9140450093380597 NRMSE: 0.1623237452207529 MAPE: 163.99650754553255 Predictor: RandomForests Pearson Correlation: 0.7754829149733395 Spearman Correlation: 0.6583380235796261 Coefficient of Determination: 0.5962293219265364 RMSE: 0.7120606279025822 NRMSE: 0.1142312710199057 MAPE: 147.53932499906855 Pearson Correlation: 0.6538794324423199 Spearman Correlation: 0.6487017088637692 Coefficient of Determination: 0.38972486727710687 RMSE: 0.8988655307291381 NRMSE: 0.1596280466576342 MAPE: 204.98287208644416 Protein: CDH2 x_train_column_count: 474 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.9598704643446667 Spearman Correlation: 0.9397517177675101 Coefficient of Determination: 0.9213513083212462 RMSE: 0.10323086030779936 NRMSE: 0.037405196140227324 MAPE: 844.2431094389655 Pearson Correlation: 0.07949501479098868 Spearman Correlation: 0.0855428738659643 Coefficient of Determination: -6.427560217874282 RMSE: 1.054931466124137 NRMSE: 0.5557623743522113 MAPE: 2108.1139071990265 Predictor: ElasticNet Pearson Correlation: 0.17852812910846552 Spearman Correlation: 0.18118047102679763 Coefficient of Determination: 0.0009724126903641883 RMSE: 0.3679192709233093 NRMSE: 0.13331374408410368 MAPE: 465.39604536189154 Pearson Correlation: 0.09102438149903282 Spearman Correlation: 0.09537118329919032 Coefficient of Determination: 0.00028225110599533476 RMSE: 0.3870257465754021 NRMSE: 0.203894143609583 MAPE: 137.47764156288068 Predictor: RandomForests Pearson Correlation: 0.5493655425793792 Spearman Correlation: 0.5120817654816059 Coefficient of Determination: 0.17000872571102954 RMSE: 0.3353517359054917 NRMSE: 0.12151305743368786 MAPE: 610.5666943640239 Pearson Correlation: 0.21970028257364474 Spearman Correlation: 0.29996097941664235 Coefficient of Determination: 0.0435029906992912 RMSE: 0.37856718351279484 NRMSE: 0.1994379763207694 MAPE: 146.86111997052018 Protein: CDH3 x_train_column_count: 75 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.5837518064328462 Spearman Correlation: 0.585104189692446 Coefficient of Determination: 0.3407661715136112 RMSE: 0.1686437544312653 NRMSE: 0.12692101061258892 MAPE: 295.76675608103653 Pearson Correlation: 0.23367899334892914 Spearman Correlation: 0.30939420544337143 Coefficient of Determination: -0.26000337386192274 RMSE: 0.22217336051805225 NRMSE: 0.1828135937777111 MAPE: 2816.195128057508 Predictor: ElasticNet Pearson Correlation: 0.4101860323990973 Spearman Correlation: 0.42336698511581383 Coefficient of Determination: 0.037973682434135236 RMSE: 0.20372484501116006 NRMSE: 0.15332298135148603 MAPE: 131.91117439441007 Pearson Correlation: 0.24178632020664997 Spearman Correlation: 0.2528485025851137 Coefficient of Determination: -0.11894141609684361 RMSE: 0.20936775900522947 NRMSE: 0.17227660578065457 MAPE: 305.9206303138362 Predictor: RandomForests Pearson Correlation: 0.5544877471596632 Spearman Correlation: 0.5569509659532826 Coefficient of Determination: 0.272297778080836 RMSE: 0.17718517020196192 NRMSE: 0.13334926599230987 MAPE: 248.97901686314188 Pearson Correlation: 0.18971090812238542 Spearman Correlation: 0.23190908204077657 Coefficient of Determination: -0.14379433371693118 RMSE: 0.21168013335163996 NRMSE: 0.17417932473598288 MAPE: 1459.8920061191423 Protein: PTEN x_train_column_count: 886 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 2.8060391145235634e-15 NRMSE: 4.3875210922110285e-16 MAPE: 2.9630974534066067e-12 Pearson Correlation: 0.1933736078830396 Spearman Correlation: 0.182123695249244 Coefficient of Determination: -2.4650550780016753 RMSE: 0.9523820762518095 NRMSE: 0.3194198001917794 MAPE: 5200.494968179748 Predictor: ElasticNet Pearson Correlation: 0.44716570199405303 Spearman Correlation: 0.43813824793087164 Coefficient of Determination: 0.11488508373127304 RMSE: 0.5868270503226877 NRMSE: 0.09175624272108321 MAPE: 319.72684265147876 Pearson Correlation: 0.28561371043654066 Spearman Correlation: 0.2672812408545508 Coefficient of Determination: 0.07236820773796937 RMSE: 0.4927696535119634 NRMSE: 0.16527020844914256 MAPE: 490.02804806963115 Predictor: RandomForests Pearson Correlation: 0.6015618104442768 Spearman Correlation: 0.553701541960766 Coefficient of Determination: 0.3110972699039264 RMSE: 0.5177132115498015 NRMSE: 0.0809496069970763 MAPE: 241.20949464405535 Pearson Correlation: 0.3050308357140823 Spearman Correlation: 0.3214250438797555 Coefficient of Determination: 0.08090593848048555 RMSE: 0.49049673668235017 NRMSE: 0.16450789397717674 MAPE: 511.53270253580524 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.8428930672615108 Spearman Correlation: 0.8067633866629308 Coefficient of Determination: 0.7104687228375179 RMSE: 0.10510036682360843 NRMSE: 0.06770840188346493 MAPE: 346.1634618973154 Pearson Correlation: 0.17745918604666758 Spearman Correlation: 0.18285533118720126 Coefficient of Determination: -1.391060764262941 RMSE: 0.29872729172219514 NRMSE: 0.20220755804200494 MAPE: 561.6151147193748 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: RandomForests Pearson Correlation: 0.5556947570508174 Spearman Correlation: 0.4945635491957955 Coefficient of Determination: 0.20617546573534362 RMSE: 0.17402784703849092 NRMSE: 0.11211328525591298 MAPE: 173.7205390648931 Pearson Correlation: 0.4121269278613817 Spearman Correlation: 0.3884986830553117 Coefficient of Determination: 0.11299431012941985 RMSE: 0.18194611966637683 NRMSE: 0.12315875238868555 MAPE: 158.60973492360787 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 3.755609040227598e-15 NRMSE: 8.490130078507059e-16 MAPE: 2.4490962375082443e-12 Pearson Correlation: 0.02491121165899406 Spearman Correlation: -0.011452541215491174 Coefficient of Determination: -4.88902196768515 RMSE: 1.6342388761078213 NRMSE: 0.4414952658601203 MAPE: 1752.7306782099622 Predictor: ElasticNet Pearson Correlation: 0.4850620905266957 Spearman Correlation: 0.3595514359832579 Coefficient of Determination: 0.1615856226104484 RMSE: 0.6073916549813992 NRMSE: 0.1373101966726346 MAPE: 232.32670852839382 Pearson Correlation: 0.46867676591403656 Spearman Correlation: 0.3984733196761292 Coefficient of Determination: 0.14842014606392173 RMSE: 0.6214506400606786 NRMSE: 0.16788703265092897 MAPE: 183.86802372719004 Predictor: RandomForests Pearson Correlation: 0.6650136701741173 Spearman Correlation: 0.6358313260182442 Coefficient of Determination: 0.4266274375479594 RMSE: 0.5022939135029205 NRMSE: 0.11355124076023973 MAPE: 161.66907817203366 Pearson Correlation: 0.6865406209493548 Spearman Correlation: 0.5499365915520438 Coefficient of Determination: 0.430915936717958 RMSE: 0.5080215815552276 NRMSE: 0.1372437814877965 MAPE: 122.92552780553332 Protein: TP53 x_train_column_count: 1001 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.5476835681219156e-15 NRMSE: 6.823847778550732e-16 MAPE: 4.209467711822812e-12 Pearson Correlation: 0.23719793180009743 Spearman Correlation: 0.2854063018242123 Coefficient of Determination: -1.1088898542768169 RMSE: 0.5945074042277578 NRMSE: 0.1957870588597918 MAPE: 2001.337920618533 Predictor: ElasticNet Pearson Correlation: 0.49008557943462416 Spearman Correlation: 0.49147207175592345 Coefficient of Determination: 0.19232173318785306 RMSE: 0.40920236393929377 NRMSE: 0.10960288306931668 MAPE: 324.7902675326891 Pearson Correlation: 0.44055834265387717 Spearman Correlation: 0.4434103989854649 Coefficient of Determination: 0.16528487705522155 RMSE: 0.3740239910526728 NRMSE: 0.12317602208222388 MAPE: 1721.334437305324 Predictor: RandomForests Pearson Correlation: 0.6505453354646915 Spearman Correlation: 0.5819069248692361 Coefficient of Determination: 0.36529986789386737 RMSE: 0.36274649919177704 NRMSE: 0.0971599033592546 MAPE: 354.6929875131954 Pearson Correlation: 0.6336804868102075 Spearman Correlation: 0.47527070529704424 Coefficient of Determination: 0.34763982816256334 RMSE: 0.3306541960671895 NRMSE: 0.10889319811203342 MAPE: 1879.1378770775584 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 4.2590782647439784e-15 NRMSE: 8.377415941667937e-16 MAPE: 2.951955380757281e-12 Pearson Correlation: 0.37737779907512187 Spearman Correlation: 0.37150521900302413 Coefficient of Determination: -0.48345548275847494 RMSE: 0.9336170933793003 NRMSE: 0.23235287657830825 MAPE: 275.5321154777403 Predictor: ElasticNet Pearson Correlation: 0.5420312116579821 Spearman Correlation: 0.5153468075173743 Coefficient of Determination: 0.1998386226382125 RMSE: 0.6485104324877792 NRMSE: 0.12755909372300928 MAPE: 647.6953782355914 Pearson Correlation: 0.4721703908029855 Spearman Correlation: 0.4993073846454005 Coefficient of Determination: 0.06239513175016442 RMSE: 0.7422350558951895 NRMSE: 0.18472289288349955 MAPE: 242.71416401840926 Predictor: RandomForests Pearson Correlation: 0.6410652602353805 Spearman Correlation: 0.6032518700064903 Coefficient of Determination: 0.2662699013246782 RMSE: 0.6210067802969268 NRMSE: 0.12214924868153557 MAPE: 576.893927756645 Pearson Correlation: 0.4112545183054059 Spearman Correlation: 0.4323383084577115 Coefficient of Determination: 0.03919075416296702 RMSE: 0.7513635490759296 NRMSE: 0.1869947360881834 MAPE: 238.20971631080448 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.9544761056842739 Spearman Correlation: 0.8715046771301358 Coefficient of Determination: 0.9110246363222173 RMSE: 0.15296084136791668 NRMSE: 0.03691407229478888 MAPE: 36.322395549356315 Pearson Correlation: 0.5073457097809748 Spearman Correlation: 0.4794946834455176 Coefficient of Determination: -0.25895942089384416 RMSE: 0.4693167288092081 NRMSE: 0.25506482579210116 MAPE: 78.45821354491402 Predictor: ElasticNet Pearson Correlation: 0.6726188993565676 Spearman Correlation: 0.6140254021712752 Coefficient of Determination: 0.3731797189577253 RMSE: 0.40599145950592413 NRMSE: 0.0979780050452311 MAPE: 83.13272639481194 Pearson Correlation: 0.7287590523731049 Spearman Correlation: 0.6625646278411864 Coefficient of Determination: 0.4746679021593526 RMSE: 0.303163657141347 NRMSE: 0.1647637525972136 MAPE: 53.215830200238024 Predictor: RandomForests Pearson Correlation: 0.8601666551404066 Spearman Correlation: 0.7113393454881213 Coefficient of Determination: 0.7348264342628519 RMSE: 0.2640647871153272 NRMSE: 0.06372681109040887 MAPE: 68.28606293399753 Pearson Correlation: 0.8394601414804943 Spearman Correlation: 0.7380981055063798 Coefficient of Determination: 0.7018944615029981 RMSE: 0.22837322839566587 NRMSE: 0.12411655954416377 MAPE: 41.145629433483656 Protein: CCND1 x_train_column_count: 859 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 9.847418240698052e-16 NRMSE: 5.919983071442e-16 MAPE: 3.171235612142203e-12 Pearson Correlation: 0.1678123040060668 Spearman Correlation: 0.26983221149156184 Coefficient of Determination: -1.2168821492863944 RMSE: 0.35053582144966905 NRMSE: 0.2711950094770603 MAPE: 744.8791611086734 Predictor: ElasticNet Pearson Correlation: 0.2553211072643501 Spearman Correlation: 0.2013501874186171 Coefficient of Determination: 0.0010956886527865306 RMSE: 0.23861317613783342 NRMSE: 0.14344734110316903 MAPE: 629.5364547656819 Pearson Correlation: 0.06978611061687223 Spearman Correlation: 0.08860598965954541 Coefficient of Determination: -0.0017641462745487946 RMSE: 0.2356371949239719 NRMSE: 0.18230271316145627 MAPE: 420.4752730384974 Predictor: RandomForests Pearson Correlation: 0.5848700025629117 Spearman Correlation: 0.5733946679048425 Coefficient of Determination: 0.3058273738047287 RMSE: 0.19891439798107882 NRMSE: 0.11958158371372163 MAPE: 476.49107250785033 Pearson Correlation: 0.25308027630238145 Spearman Correlation: 0.39063018242122727 Coefficient of Determination: 0.04518044892874762 RMSE: 0.23004974369050288 NRMSE: 0.17797993415431615 MAPE: 303.77507172907644 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.9999999999999996 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 6.04082001046161e-15 NRMSE: 1.0840801842078872e-15 MAPE: 6.9842921855527574e-12 Pearson Correlation: 0.338332152105857 Spearman Correlation: 0.2431226221832017 Coefficient of Determination: -1.2690407656345566 RMSE: 1.5924982387815179 NRMSE: 0.2713082847132763 MAPE: 4502.909290726943 Predictor: ElasticNet Pearson Correlation: 0.7233739550581938 Spearman Correlation: 0.619284341242372 Coefficient of Determination: 0.36352932870982324 RMSE: 0.7842356317465236 NRMSE: 0.14073822869309324 MAPE: 362.05225994589114 Pearson Correlation: 0.6066824317183247 Spearman Correlation: 0.45524339088869387 Coefficient of Determination: 0.2591158489324197 RMSE: 0.9099823392326404 NRMSE: 0.1550304682066614 MAPE: 2351.2436986885127 Predictor: RandomForests Pearson Correlation: 0.8515796739482241 Spearman Correlation: 0.7048712720382518 Coefficient of Determination: 0.7214987644531584 RMSE: 0.5187653203783733 NRMSE: 0.09309716281936961 MAPE: 259.70392022517353 Pearson Correlation: 0.8140939991468883 Spearman Correlation: 0.5456280388304897 Coefficient of Determination: 0.6411067376064739 RMSE: 0.6333451717444715 NRMSE: 0.10790077376091989 MAPE: 1386.3461066112197 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.7767425827744902 Spearman Correlation: 0.7789599805385371 Coefficient of Determination: 0.6033290398951856 RMSE: 0.28035290002686264 NRMSE: 0.075659201134232 MAPE: 156.2633123001785 Pearson Correlation: 0.14921105433854365 Spearman Correlation: 0.1423665983806458 Coefficient of Determination: -0.3556603643092202 RMSE: 0.6028606461894046 NRMSE: 0.22249146409213372 MAPE: 321.18905058144054 Predictor: ElasticNet Pearson Correlation: 0.42985089818097677 Spearman Correlation: 0.4440220798765861 Coefficient of Determination: 0.10194131907099924 RMSE: 0.42183460774771764 NRMSE: 0.11384105329356806 MAPE: 200.49737787651173 Pearson Correlation: 0.36266883817755813 Spearman Correlation: 0.3345332162715833 Coefficient of Determination: 0.07370998630226311 RMSE: 0.4983276401699614 NRMSE: 0.18391256247991813 MAPE: 300.1779873771697 Predictor: RandomForests Pearson Correlation: 0.5716440103686522 Spearman Correlation: 0.5791464917896721 Coefficient of Determination: 0.3023260459260617 RMSE: 0.37180575198106014 NRMSE: 0.10033970103146433 MAPE: 198.52760475855482 Pearson Correlation: 0.3924130683415336 Spearman Correlation: 0.3616135011218419 Coefficient of Determination: 0.14877586781419327 RMSE: 0.47770902818337785 NRMSE: 0.1763030673213947 MAPE: 379.33122772248294 Fold: 3 Protein: RB1 x_train_column_count: 371 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.8445041645976727 Spearman Correlation: 0.7669788712372014 Coefficient of Determination: 0.7131872840228131 RMSE: 0.12884298828566926 NRMSE: 0.04711929062524475 MAPE: 533.3998165897772 Pearson Correlation: -0.0161308939664125 Spearman Correlation: 0.029982917492736825 Coefficient of Determination: -2.2025586771634114 RMSE: 0.39668503134268 NRMSE: 0.2783481141099681 MAPE: 1474.9294647200838 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: RandomForests Pearson Correlation: 0.6348626211614683 Spearman Correlation: 0.44821220351293334 Coefficient of Determination: 0.18713766590755776 RMSE: 0.21690526200765473 NRMSE: 0.07932462770906039 MAPE: 225.21191852464804 Pearson Correlation: 0.23499155905840322 Spearman Correlation: 0.22072843801044903 Coefficient of Determination: 0.010624377473585689 RMSE: 0.22048440038712697 NRMSE: 0.15471069536124657 MAPE: 202.97632552758108 Protein: CDH1 x_train_column_count: 836 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.474629500436693e-15 NRMSE: 7.12497930071764e-16 MAPE: 4.0428307550081526e-12 Pearson Correlation: 0.40318442315105063 Spearman Correlation: 0.20276811431563987 Coefficient of Determination: -1.3114519789781887 RMSE: 1.4314663903818918 NRMSE: 0.28141909927690245 MAPE: 705.6595194524994 Predictor: ElasticNet Pearson Correlation: 0.7055906341281423 Spearman Correlation: 0.6916720201743208 Coefficient of Determination: 0.43106933784858914 RMSE: 0.8860531003392852 NRMSE: 0.14108676480673946 MAPE: 433.20992074356406 Pearson Correlation: 0.594197548630309 Spearman Correlation: 0.5014800683300291 Coefficient of Determination: 0.28870333207859544 RMSE: 0.7940797206822227 NRMSE: 0.15611208286128705 MAPE: 207.76342131195463 Predictor: RandomForests Pearson Correlation: 0.761883039454922 Spearman Correlation: 0.694343325597399 Coefficient of Determination: 0.5759765683340765 RMSE: 0.764935836324877 NRMSE: 0.12180119045967915 MAPE: 213.92655914173613 Pearson Correlation: 0.7193356885059549 Spearman Correlation: 0.4568389683187596 Coefficient of Determination: 0.5078883336909982 RMSE: 0.6604965422249376 NRMSE: 0.12985030122772334 MAPE: 146.20083511009287 Protein: CDH2 x_train_column_count: 474 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.9565892050876684 Spearman Correlation: 0.9348848019379982 Coefficient of Determination: 0.9150629072902579 RMSE: 0.11110787471358001 NRMSE: 0.04025939369286906 MAPE: 340.931385366361 Pearson Correlation: -0.02160650655030942 Spearman Correlation: -0.030202371600643402 Coefficient of Determination: -9.270616503724352 RMSE: 1.0639179455667513 NRMSE: 0.5605823052915629 MAPE: 16058.883745402423 Predictor: ElasticNet Pearson Correlation: 0.15830323465523358 Spearman Correlation: 0.13887262040701592 Coefficient of Determination: 0.0004926328255235868 RMSE: 0.38114405000308904 NRMSE: 0.1381056779487967 MAPE: 301.15752374079466 Pearson Correlation: -0.1732712087320546 Spearman Correlation: -0.20031920597513686 Coefficient of Determination: -0.0030911344306878696 RMSE: 0.3324911374955035 NRMSE: 0.17519081158740465 MAPE: 592.823604573626 Predictor: RandomForests Pearson Correlation: 0.5652517785700716 Spearman Correlation: 0.5088470145015367 Coefficient of Determination: 0.18043142866362039 RMSE: 0.345134832638925 NRMSE: 0.1250579145731303 MAPE: 245.36236864938084 Pearson Correlation: 0.03066613145403758 Spearman Correlation: 0.02759884786593349 Coefficient of Determination: -0.010996809210259029 RMSE: 0.3337987993221108 NRMSE: 0.17587982344621939 MAPE: 1919.6362894195954 Protein: CDH3 x_train_column_count: 75 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.5732544744639588 Spearman Correlation: 0.5850948791311993 Coefficient of Determination: 0.32862069249294956 RMSE: 0.1741264654096039 NRMSE: 0.1221631485446511 MAPE: 654.6066681940183 Pearson Correlation: 0.2557237835851185 Spearman Correlation: 0.22250900884050925 Coefficient of Determination: -0.06833813883732964 RMSE: 0.19465693705629297 NRMSE: 0.16931548797158574 MAPE: 345.68714005041744 Predictor: ElasticNet Pearson Correlation: 0.35818175563434973 Spearman Correlation: 0.3766490380119528 Coefficient of Determination: 0.023671510224962167 RMSE: 0.20998041499215755 NRMSE: 0.14731746014491606 MAPE: 115.99666009221052 Pearson Correlation: 0.4627964949137583 Spearman Correlation: 0.43870123068866196 Coefficient of Determination: 0.02882235976432157 RMSE: 0.1855943951296169 NRMSE: 0.16143275472928484 MAPE: 102.34259653448716 Predictor: RandomForests Pearson Correlation: 0.5225956139302995 Spearman Correlation: 0.5622402253948459 Coefficient of Determination: 0.23315455049600298 RMSE: 0.18609501123253902 NRMSE: 0.13056000675796922 MAPE: 469.6983093031111 Pearson Correlation: 0.39932281403695874 Spearman Correlation: 0.3854187708076161 Coefficient of Determination: 0.15213700167083843 RMSE: 0.17341168588359643 NRMSE: 0.1508360537228913 MAPE: 184.38821913274916 Protein: PTEN x_train_column_count: 886 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.7079827278422664e-15 NRMSE: 4.2342001842580975e-16 MAPE: 7.437074235555386e-12 Pearson Correlation: 0.09257553769143255 Spearman Correlation: 0.22394543572862508 Coefficient of Determination: -2.7630666509838 RMSE: 0.9135945798512659 NRMSE: 0.2184274326618051 MAPE: 340.15196452217816 Predictor: ElasticNet Pearson Correlation: 0.4548429657047358 Spearman Correlation: 0.4413333842451172 Coefficient of Determination: 0.11834636190873338 RMSE: 0.5908847926368316 NRMSE: 0.09239071106822477 MAPE: 384.2263805113973 Pearson Correlation: 0.23722232943186483 Spearman Correlation: 0.21576578261574336 Coefficient of Determination: 0.00901927242387568 RMSE: 0.4688297509517139 NRMSE: 0.11209050613295891 MAPE: 101.07284088653219 Predictor: RandomForests Pearson Correlation: 0.6060411672853728 Spearman Correlation: 0.5257816714293839 Coefficient of Determination: 0.29220554148664435 RMSE: 0.5294285896942086 NRMSE: 0.08278142282764578 MAPE: 258.9368253437717 Pearson Correlation: 0.4114203501209551 Spearman Correlation: 0.4148555468272672 Coefficient of Determination: 0.15242233418112272 RMSE: 0.43358306511860956 NRMSE: 0.10366352630388026 MAPE: 104.94304075951999 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.8621656854765118 Spearman Correlation: 0.845304744028025 Coefficient of Determination: 0.7433296692131832 RMSE: 0.09628442678666146 NRMSE: 0.0648939333477081 MAPE: 224.3198084044078 Pearson Correlation: -0.025405348305672336 Spearman Correlation: -0.035838352099153356 Coefficient of Determination: -1.3274645946420116 RMSE: 0.3266795413490752 NRMSE: 0.22469343715760834 MAPE: 722.184166857073 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: RandomForests Pearson Correlation: 0.5605405316592658 Spearman Correlation: 0.4983927339274552 Coefficient of Determination: 0.24554202322065388 RMSE: 0.16507668592587535 NRMSE: 0.11125865117803585 MAPE: 190.69652864516428 Pearson Correlation: 0.20616610433964286 Spearman Correlation: 0.24763151660245142 Coefficient of Determination: 0.04184350790161473 RMSE: 0.20960354273128404 NRMSE: 0.14416740106286174 MAPE: 203.44582532613623 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 4.4290661408969766e-15 NRMSE: 1.0340554120510312e-15 MAPE: 6.5733273515265225e-12 Pearson Correlation: 0.22454035016127913 Spearman Correlation: 0.18675295203182085 Coefficient of Determination: -4.192027759557082 RMSE: 1.495996221075639 NRMSE: 0.4618555219275845 MAPE: 739.4493847252487 Predictor: ElasticNet Pearson Correlation: 0.5044880528620912 Spearman Correlation: 0.3884753622826554 Coefficient of Determination: 0.1907830231889429 RMSE: 0.6005387779213667 NRMSE: 0.14020797019083084 MAPE: 229.14304317003786 Pearson Correlation: 0.33450300671669403 Spearman Correlation: 0.2786094589708102 Coefficient of Determination: 0.09272125792935082 RMSE: 0.6253632575871491 NRMSE: 0.19306698082404034 MAPE: 159.83283403773382 Predictor: RandomForests Pearson Correlation: 0.674000277923669 Spearman Correlation: 0.6378490512894603 Coefficient of Determination: 0.4430090737569734 RMSE: 0.4982331537951955 NRMSE: 0.11632264517071243 MAPE: 165.4712241981439 Pearson Correlation: 0.6095567272806891 Spearman Correlation: 0.6109727053953292 Coefficient of Determination: 0.3615088635348833 RMSE: 0.5246134610821274 NRMSE: 0.16196272454759883 MAPE: 97.78707783701522 Protein: TP53 x_train_column_count: 1001 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.9492126600735497e-15 NRMSE: 4.684481278715573e-16 MAPE: 3.998658717330757e-12 Pearson Correlation: 0.2450186588585545 Spearman Correlation: 0.17782017232135067 Coefficient of Determination: -0.7616597411941362 RMSE: 0.5713234492506785 NRMSE: 0.21304604531123225 MAPE: 1156.506262633099 Predictor: ElasticNet Pearson Correlation: 0.5041834053878547 Spearman Correlation: 0.48651808054817036 Coefficient of Determination: 0.20338291519108287 RMSE: 0.4017410193159278 NRMSE: 0.09654915148183799 MAPE: 582.1853224142912 Pearson Correlation: 0.4207340219743935 Spearman Correlation: 0.46240726193593445 Coefficient of Determination: 0.14329720766091647 RMSE: 0.3984154082500403 NRMSE: 0.14856877873655802 MAPE: 291.61337665938436 Predictor: RandomForests Pearson Correlation: 0.6491535493646411 Spearman Correlation: 0.5937027524327151 Coefficient of Determination: 0.3697300023395774 RMSE: 0.35734251202225764 NRMSE: 0.0858789983230612 MAPE: 572.7841332127937 Pearson Correlation: 0.47974776336749136 Spearman Correlation: 0.41579820197259315 Coefficient of Determination: 0.21329241450136505 RMSE: 0.381792773182401 NRMSE: 0.14237021176288123 MAPE: 415.847666435099 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 4.109730126633464e-15 NRMSE: 8.083654851757404e-16 MAPE: 2.4006693693642466e-12 Pearson Correlation: 0.3227572666034448 Spearman Correlation: 0.26753700170825073 Coefficient of Determination: -0.9886312078867192 RMSE: 0.8644036820082395 NRMSE: 0.28258644676460143 MAPE: 743.2187836258108 Predictor: ElasticNet Pearson Correlation: 0.5767741501762601 Spearman Correlation: 0.5642870980852291 Coefficient of Determination: 0.2435843291118608 RMSE: 0.6689876326425915 NRMSE: 0.13158686716022652 MAPE: 331.57408979369507 Pearson Correlation: 0.3088909155404072 Spearman Correlation: 0.2901307996359057 Coefficient of Determination: 0.08908074311959413 RMSE: 0.5850317342484043 NRMSE: 0.19125559326830044 MAPE: 2060.517452359517 Predictor: RandomForests Pearson Correlation: 0.6498732717738358 Spearman Correlation: 0.648096271669811 Coefficient of Determination: 0.3072239027457424 RMSE: 0.6402274308780905 NRMSE: 0.1259298644528109 MAPE: 324.44732417919585 Pearson Correlation: 0.11812289218865393 Spearman Correlation: 0.12336064040698763 Coefficient of Determination: -0.02481403294529816 RMSE: 0.6205289026949041 NRMSE: 0.2028601466850515 MAPE: 1652.5197809322694 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.9544533346044815 Spearman Correlation: 0.8721154079745697 Coefficient of Determination: 0.9109811679376143 RMSE: 0.1558702452290122 NRMSE: 0.03761619934575674 MAPE: 32.56886761652151 Pearson Correlation: 0.5680098126924269 Spearman Correlation: 0.39923440441900776 Coefficient of Determination: -0.4750482184010103 RMSE: 0.44316294770503056 NRMSE: 0.1930404441804376 MAPE: 159.2662877122222 Predictor: ElasticNet Pearson Correlation: 0.6972603860920463 Spearman Correlation: 0.6321086743644284 Coefficient of Determination: 0.41294826690043496 RMSE: 0.40027683757497934 NRMSE: 0.0965988941223977 MAPE: 74.31268664441002 Pearson Correlation: 0.5773729047237426 Spearman Correlation: 0.5325128742253644 Coefficient of Determination: 0.3202575910062483 RMSE: 0.30083787816522567 NRMSE: 0.1310440729037878 MAPE: 75.23600187744381 Predictor: RandomForests Pearson Correlation: 0.8639692097627703 Spearman Correlation: 0.7275169540040112 Coefficient of Determination: 0.7429467272253591 RMSE: 0.26487065255304676 NRMSE: 0.06392129076744137 MAPE: 55.38554580037876 Pearson Correlation: 0.7760238688287519 Spearman Correlation: 0.6684071147859494 Coefficient of Determination: 0.5477607744341675 RMSE: 0.2453829866482355 NRMSE: 0.10688808931839329 MAPE: 80.02763552235753 Protein: CCND1 x_train_column_count: 859 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.3931912453528291e-15 NRMSE: 8.375462873795128e-16 MAPE: 5.085997180338718e-12 Pearson Correlation: 0.23083229812956602 Spearman Correlation: 0.21655382236686244 Coefficient of Determination: -1.3109830365675599 RMSE: 0.3188444008074788 NRMSE: 0.3021276764684779 MAPE: 501.09837433937975 Predictor: ElasticNet Pearson Correlation: 0.22324045281592123 Spearman Correlation: 0.2597344851521026 Coefficient of Determination: 0.0003115901717327674 RMSE: 0.24461824369214077 NRMSE: 0.1470574140578692 MAPE: 620.5422396961181 Pearson Correlation: 0.07607581205909651 Spearman Correlation: 0.08772428583897555 Coefficient of Determination: -0.0009309097943495104 RMSE: 0.20983719222611147 NRMSE: 0.19883561750932074 MAPE: 467.64618390592904 Predictor: RandomForests Pearson Correlation: 0.5897710312353405 Spearman Correlation: 0.5713633831299172 Coefficient of Determination: 0.29123185736813684 RMSE: 0.20597220089215873 NRMSE: 0.12382453072114002 MAPE: 479.9119266859347 Pearson Correlation: 0.39371097182997356 Spearman Correlation: 0.3903714510155987 Coefficient of Determination: 0.13908917150487698 RMSE: 0.19460746755706568 NRMSE: 0.18440437356757192 MAPE: 300.2271654611187 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.899880691110149e-15 NRMSE: 6.644088609486257e-16 MAPE: 1.1687841540871375e-11 Pearson Correlation: 0.5950720881631723 Spearman Correlation: 0.34308699994665004 Coefficient of Determination: -0.6817418393779306 RMSE: 1.3831117717221837 NRMSE: 0.24949703653261127 MAPE: 628.2714074974228 Predictor: ElasticNet Pearson Correlation: 0.7091131726238019 Spearman Correlation: 0.5992643041440296 Coefficient of Determination: 0.33383730310947934 RMSE: 0.800872154416297 NRMSE: 0.13644175246031262 MAPE: 844.4248052888801 Pearson Correlation: 0.7059542441027785 Spearman Correlation: 0.5740253295249159 Coefficient of Determination: 0.3114414160339698 RMSE: 0.8850097628385445 NRMSE: 0.15964531402672352 MAPE: 184.8240978818005 Predictor: RandomForests Pearson Correlation: 0.8449849078963357 Spearman Correlation: 0.6637984079557606 Coefficient of Determination: 0.7051627916818983 RMSE: 0.5327999607717844 NRMSE: 0.09077124227333329 MAPE: 545.0259590118802 Pearson Correlation: 0.8590935633979401 Spearman Correlation: 0.7056050337675138 Coefficient of Determination: 0.729751059609612 RMSE: 0.5544464575874581 NRMSE: 0.10001559592817992 MAPE: 195.76151695391974 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.7875229898223587 Spearman Correlation: 0.7767506713767574 Coefficient of Determination: 0.6201924594987467 RMSE: 0.277947362786117 NRMSE: 0.1007833446776378 MAPE: 178.13249189293754 Pearson Correlation: 0.12092833241419283 Spearman Correlation: 0.13810396638362074 Coefficient of Determination: -0.753427459936225 RMSE: 0.6550959411675095 NRMSE: 0.1821355226711641 MAPE: 273.60678319673315 Predictor: ElasticNet Pearson Correlation: 0.4505901136585096 Spearman Correlation: 0.451689309441168 Coefficient of Determination: 0.11974337748141317 RMSE: 0.423141300909502 NRMSE: 0.1534304738473902 MAPE: 222.6955145887451 Pearson Correlation: 0.33899014924642706 Spearman Correlation: 0.39477549595381495 Coefficient of Determination: 0.05343364241702142 RMSE: 0.4813229161784311 NRMSE: 0.1338216212354017 MAPE: 146.40305019731565 Predictor: RandomForests Pearson Correlation: 0.5606451160135087 Spearman Correlation: 0.6004710985802729 Coefficient of Determination: 0.30016484465582927 RMSE: 0.3772929097476907 NRMSE: 0.1368059080912772 MAPE: 235.00265445870744 Pearson Correlation: 0.3683699387537341 Spearman Correlation: 0.33612638561578073 Coefficient of Determination: 0.11059982664782475 RMSE: 0.46656226612841395 NRMSE: 0.1297177357693512 MAPE: 160.24857145858988 Fold: 4 Protein: RB1 x_train_column_count: 371 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.8398703817808183 Spearman Correlation: 0.7506062117745007 Coefficient of Determination: 0.7053822581926574 RMSE: 0.13651681681612177 NRMSE: 0.04992569368641083 MAPE: 475.1924065452071 Pearson Correlation: 0.10167487438263645 Spearman Correlation: 0.10561977082008503 Coefficient of Determination: -4.279099410069374 RMSE: 0.3788384809320053 NRMSE: 0.3629694563024617 MAPE: 594.1201206026583 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: RandomForests Pearson Correlation: 0.6257425471713854 Spearman Correlation: 0.45723712614179207 Coefficient of Determination: 0.19012921276554873 RMSE: 0.22634169921415628 NRMSE: 0.08277563604964756 MAPE: 154.994205808006 Pearson Correlation: 0.1925534966260292 Spearman Correlation: 0.19314704672128083 Coefficient of Determination: -0.053290047746569424 RMSE: 0.1692186230126267 NRMSE: 0.1621302868706422 MAPE: 105.09269540272494 Protein: CDH1 x_train_column_count: 836 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.29358793713091e-15 NRMSE: 6.836705737286884e-16 MAPE: 3.577876066188565e-12 Pearson Correlation: 0.23616266736175404 Spearman Correlation: 0.23164129228543998 Coefficient of Determination: -1.1417903453250564 RMSE: 1.7070786643216183 NRMSE: 0.3096909880486227 MAPE: 886.0823046370177 Predictor: ElasticNet Pearson Correlation: 0.7017017887936349 Spearman Correlation: 0.6829456068338512 Coefficient of Determination: 0.41556301533054407 RMSE: 0.8554671146237143 NRMSE: 0.13621654001842523 MAPE: 381.50467029977176 Pearson Correlation: 0.6519688010193061 Spearman Correlation: 0.5065923515255801 Coefficient of Determination: 0.3160229538389212 RMSE: 0.9646856533103695 NRMSE: 0.17500918930923579 MAPE: 258.57248770542043 Predictor: RandomForests Pearson Correlation: 0.7494142949687495 Spearman Correlation: 0.7191521424935826 Coefficient of Determination: 0.5567404513379521 RMSE: 0.7450124383245037 NRMSE: 0.11862877588683539 MAPE: 223.650607306605 Pearson Correlation: 0.7730195641847599 Spearman Correlation: 0.5187321537675034 Coefficient of Determination: 0.5299743770162841 RMSE: 0.7996976558936354 NRMSE: 0.1450777649384339 MAPE: 149.35397387043358 Protein: CDH2 x_train_column_count: 474 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.9462941657111009 Spearman Correlation: 0.92443465903766 Coefficient of Determination: 0.8954726480588682 RMSE: 0.12265084874295047 NRMSE: 0.04444193374264457 MAPE: 1263.891967121989 Pearson Correlation: 0.21101530774341806 Spearman Correlation: 0.29054476988491135 Coefficient of Determination: -10.698582283594614 RMSE: 1.139879572533342 NRMSE: 0.5880275125527948 MAPE: 1054.6753919089504 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: RandomForests Pearson Correlation: 0.5551909831155625 Spearman Correlation: 0.5319185224633426 Coefficient of Determination: 0.1621186002086169 RMSE: 0.34725368134240964 NRMSE: 0.1258256690131204 MAPE: 746.5447768031952 Pearson Correlation: 0.19127219849889193 Spearman Correlation: 0.15188468684148182 Coefficient of Determination: -0.020031245588358892 RMSE: 0.33658835880338656 NRMSE: 0.1736351980950985 MAPE: 166.70450734569494 Protein: CDH3 x_train_column_count: 75 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.5493156064038008 Spearman Correlation: 0.5590690895539345 Coefficient of Determination: 0.30174763543877525 RMSE: 0.17206154006860347 NRMSE: 0.12262606729806254 MAPE: 612.2957994865696 Pearson Correlation: 0.30323642915312965 Spearman Correlation: 0.21644409531290917 Coefficient of Determination: 0.023369711617291733 RMSE: 0.20535377158461188 NRMSE: 0.1827738857402601 MAPE: 370.1577939959501 Predictor: ElasticNet Pearson Correlation: 0.37454135690241697 Spearman Correlation: 0.3752559781405035 Coefficient of Determination: 0.02529570818890048 RMSE: 0.20328907392322934 NRMSE: 0.14488153279304228 MAPE: 173.0695721384089 Pearson Correlation: 0.289551772207729 Spearman Correlation: 0.2790832803401539 Coefficient of Determination: -0.07410947900271037 RMSE: 0.21535842369527122 NRMSE: 0.191678466005012 MAPE: 174.07632460863118 Predictor: RandomForests Pearson Correlation: 0.5159809720497014 Spearman Correlation: 0.533584219015726 Coefficient of Determination: 0.22916603505065325 RMSE: 0.1807831792229734 NRMSE: 0.12884186839728992 MAPE: 293.4305742187338 Pearson Correlation: 0.38126170209617005 Spearman Correlation: 0.360281749500585 Coefficient of Determination: 0.068997810424264 RMSE: 0.200499336754623 NRMSE: 0.17845322530094432 MAPE: 286.753328452953 Protein: PTEN x_train_column_count: 886 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.7986042956768405e-15 NRMSE: 5.413579959139663e-16 MAPE: 2.477410699846715e-12 Pearson Correlation: 0.11704042681823644 Spearman Correlation: 0.21468347485629496 Coefficient of Determination: -0.7047157648787168 RMSE: 0.9734535036612341 NRMSE: 0.1522091319930004 MAPE: 522.2726226844613 Predictor: ElasticNet Pearson Correlation: 0.42271100422693253 Spearman Correlation: 0.3948925128814583 Coefficient of Determination: 0.09821335648941931 RMSE: 0.5334812638295254 NRMSE: 0.10319584954919635 MAPE: 256.9519720834883 Pearson Correlation: 0.2823839447495531 Spearman Correlation: 0.29986159428421805 Coefficient of Determination: 0.039046077114628486 RMSE: 0.7308706228221148 NRMSE: 0.11427888715848875 MAPE: 632.4862724423841 Predictor: RandomForests Pearson Correlation: 0.6056395735700819 Spearman Correlation: 0.531673816474884 Coefficient of Determination: 0.2812108868850163 RMSE: 0.47628622080922206 NRMSE: 0.09213212256445799 MAPE: 175.64886646189873 Pearson Correlation: 0.43505564588252316 Spearman Correlation: 0.4688761705258171 Coefficient of Determination: 0.14481069815334868 RMSE: 0.6894779052939363 NRMSE: 0.10780672430520463 MAPE: 454.9202229500479 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.8492008889056355 Spearman Correlation: 0.8179276176939857 Coefficient of Determination: 0.7211421497181215 RMSE: 0.10128236943430233 NRMSE: 0.06524874822631814 MAPE: 211.40701722278706 Pearson Correlation: 0.12141654028279596 Spearman Correlation: 0.1352211374206661 Coefficient of Determination: -1.855324214330301 RMSE: 0.35165371433906245 NRMSE: 0.3416402389358526 MAPE: 940.9358621228607 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: RandomForests Pearson Correlation: 0.5269892125734114 Spearman Correlation: 0.45687235350052896 Coefficient of Determination: 0.21659947143226044 RMSE: 0.16975960084763375 NRMSE: 0.10936356955879128 MAPE: 151.90301686965086 Pearson Correlation: 0.34697437637148304 Spearman Correlation: 0.365972144291076 Coefficient of Determination: 0.10677167893302919 RMSE: 0.19668386642927202 NRMSE: 0.19108321732934883 MAPE: 210.6387968686485 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 4.3189902676263116e-15 NRMSE: 9.763739725616165e-16 MAPE: 3.2564151759427783e-12 Pearson Correlation: 0.19412005314432754 Spearman Correlation: 0.18843875858801232 Coefficient of Determination: -6.613105958331328 RMSE: 1.7401505108164244 NRMSE: 0.5242996417042556 MAPE: 1069.397340206037 Predictor: ElasticNet Pearson Correlation: 0.48820863800905206 Spearman Correlation: 0.39394385823646894 Coefficient of Determination: 0.16808700704121682 RMSE: 0.6147094152913293 NRMSE: 0.13896448859304378 MAPE: 209.49730863059193 Pearson Correlation: 0.4701521851707853 Spearman Correlation: 0.29736779760346144 Coefficient of Determination: 0.1540993165216864 RMSE: 0.5800501776235633 NRMSE: 0.1747665494497027 MAPE: 133.7488655772837 Predictor: RandomForests Pearson Correlation: 0.6819690718633923 Spearman Correlation: 0.6462979435515678 Coefficient of Determination: 0.4553534615841366 RMSE: 0.49737996263059614 NRMSE: 0.11244036682052584 MAPE: 187.13921669204146 Pearson Correlation: 0.5879725581535926 Spearman Correlation: 0.5370098592378884 Coefficient of Determination: 0.32702705808545407 RMSE: 0.5173740925523513 NRMSE: 0.15588252261294105 MAPE: 120.1624623454324 Protein: TP53 x_train_column_count: 1001 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.6408257881980406e-15 NRMSE: 3.9433448406585934e-16 MAPE: 7.77026299626469e-12 Pearson Correlation: 0.36854420773416885 Spearman Correlation: 0.32326338233643814 Coefficient of Determination: -1.1006498049639646 RMSE: 0.6258523545242678 NRMSE: 0.19860762710214133 MAPE: 660.3006668487272 Predictor: ElasticNet Pearson Correlation: 0.5006659671684368 Spearman Correlation: 0.5051125790376082 Coefficient of Determination: 0.19764522709242416 RMSE: 0.40319090032573485 NRMSE: 0.09689759680983775 MAPE: 636.0158666339481 Pearson Correlation: 0.4512113360972279 Spearman Correlation: 0.4104365391089665 Coefficient of Determination: 0.17350042261298115 RMSE: 0.3925693413442478 NRMSE: 0.12457772954564858 MAPE: 192.87969015069407 Predictor: RandomForests Pearson Correlation: 0.6433824266604506 Spearman Correlation: 0.6041917396723134 Coefficient of Determination: 0.3583414686990819 RMSE: 0.36056161317796764 NRMSE: 0.08665263474596675 MAPE: 941.2731495586623 Pearson Correlation: 0.5358288936353018 Spearman Correlation: 0.42058629159964595 Coefficient of Determination: 0.25469168301376355 RMSE: 0.3727889623838569 NRMSE: 0.11830063543534428 MAPE: 241.8061378960294 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 2.8549987064371644e-15 NRMSE: 6.895465912561986e-16 MAPE: 1.4128897352403341e-12 Pearson Correlation: 0.2753329473212207 Spearman Correlation: 0.24738213693437575 Coefficient of Determination: -0.4816471618149014 RMSE: 0.976770840894011 NRMSE: 0.2053592719060657 MAPE: 527.5741874325549 Predictor: ElasticNet Pearson Correlation: 0.5541095747909084 Spearman Correlation: 0.5337895101362018 Coefficient of Determination: 0.2109594471619537 RMSE: 0.6319459031783659 NRMSE: 0.15262919118403195 MAPE: 689.60926251423 Pearson Correlation: 0.3609479099274049 Spearman Correlation: 0.3023504033716132 Coefficient of Determination: 0.021795043204534403 RMSE: 0.7936613276990756 NRMSE: 0.16686177102410973 MAPE: 642.7131208478266 Predictor: RandomForests Pearson Correlation: 0.6372468278179654 Spearman Correlation: 0.619141181473903 Coefficient of Determination: 0.2818379794243988 RMSE: 0.6028946882332625 NRMSE: 0.14561266743147103 MAPE: 598.9458415167467 Pearson Correlation: 0.29554981000557057 Spearman Correlation: 0.2490579683038442 Coefficient of Determination: -0.016567701288256576 RMSE: 0.809074368879058 NRMSE: 0.1701022556721592 MAPE: 689.0307806101766 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.9444685803682439 Spearman Correlation: 0.8405528464895278 Coefficient of Determination: 0.8920208993028061 RMSE: 0.16587958430114821 NRMSE: 0.040031755267308976 MAPE: 32.02378853707825 Pearson Correlation: 0.6305255244470445 Spearman Correlation: 0.4441925709796881 Coefficient of Determination: 0.07011176359192928 RMSE: 0.4359557325540313 NRMSE: 0.17789754858158466 MAPE: 122.07888089902335 Predictor: ElasticNet Pearson Correlation: 0.6823297415461541 Spearman Correlation: 0.6361039400287953 Coefficient of Determination: 0.3870982334629558 RMSE: 0.39520144314886696 NRMSE: 0.09537404810890435 MAPE: 71.466684452007 Pearson Correlation: 0.6473596964055295 Spearman Correlation: 0.537784760408484 Coefficient of Determination: 0.374051179645585 RMSE: 0.3576814591538612 NRMSE: 0.14595668781272392 MAPE: 98.05561069326617 Predictor: RandomForests Pearson Correlation: 0.8576246588103699 Spearman Correlation: 0.7171161000368212 Coefficient of Determination: 0.7307177811604746 RMSE: 0.261955139636337 NRMSE: 0.0632176894167862 MAPE: 55.86991146233804 Pearson Correlation: 0.8422166070167482 Spearman Correlation: 0.7086185752833065 Coefficient of Determination: 0.7016854226742207 RMSE: 0.24692454027950614 NRMSE: 0.10076085051803892 MAPE: 75.41903994396631 Protein: CCND1 x_train_column_count: 859 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.0031219852228343e-15 NRMSE: 6.408824224216623e-16 MAPE: 3.5033095691473313e-12 Pearson Correlation: 0.27171358707549326 Spearman Correlation: 0.22909761967106823 Coefficient of Determination: -1.85330199962816 RMSE: 0.38682351181188973 NRMSE: 0.2439603379237448 MAPE: 758.5739381151889 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: RandomForests Pearson Correlation: 0.5871579891062465 Spearman Correlation: 0.5460872566584656 Coefficient of Determination: 0.27114373943761383 RMSE: 0.20515761746171324 NRMSE: 0.1310727038126993 MAPE: 469.4096588608179 Pearson Correlation: 0.48332030152953764 Spearman Correlation: 0.41814237085250444 Coefficient of Determination: 0.19407731900565095 RMSE: 0.20558228183165161 NRMSE: 0.1296558286022021 MAPE: 500.77086320043105 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 5.5325170172581285e-15 NRMSE: 9.425553294475236e-16 MAPE: 9.742896605968851e-12 Pearson Correlation: 0.4163903898185696 Spearman Correlation: 0.2682904628369806 Coefficient of Determination: -1.2129185776079412 RMSE: 1.5421321449521068 NRMSE: 0.27769153040517647 MAPE: 902.8478201487246 Predictor: ElasticNet Pearson Correlation: 0.7115140854653665 Spearman Correlation: 0.5931660637139171 Coefficient of Determination: 0.34266654430958754 RMSE: 0.795214668924979 NRMSE: 0.1354779066945464 MAPE: 746.5390441232867 Pearson Correlation: 0.62713860014732 Spearman Correlation: 0.5123686235101971 Coefficient of Determination: 0.22821020419003823 RMSE: 0.9107273701823793 NRMSE: 0.1639945565207583 MAPE: 284.6717588756601 Predictor: RandomForests Pearson Correlation: 0.8538791896038284 Spearman Correlation: 0.6855346565573451 Coefficient of Determination: 0.7245388513570387 RMSE: 0.5147800306075009 NRMSE: 0.08770125059330135 MAPE: 384.1425396529065 Pearson Correlation: 0.7853228528382237 Spearman Correlation: 0.6864460211679355 Coefficient of Determination: 0.5681769065457153 RMSE: 0.6812269247679369 NRMSE: 0.12266844181365234 MAPE: 205.8208193896694 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.7717515445364852 Spearman Correlation: 0.7520275244234539 Coefficient of Determination: 0.5956004464944502 RMSE: 0.30379105233805176 NRMSE: 0.08306679509078056 MAPE: 174.32019294318587 Pearson Correlation: 0.11802124811646539 Spearman Correlation: 0.12498160824947943 Coefficient of Determination: -1.4594558231853099 RMSE: 0.6031247242974894 NRMSE: 0.2968615593563371 MAPE: 328.3417530231292 Predictor: ElasticNet Pearson Correlation: 0.45567888818600144 Spearman Correlation: 0.46834797455045246 Coefficient of Determination: 0.12102823188114187 RMSE: 0.44787529541600746 NRMSE: 0.12246432244865797 MAPE: 225.84328847315064 Pearson Correlation: 0.322255677574242 Spearman Correlation: 0.3114377984762903 Coefficient of Determination: 0.08497869408580994 RMSE: 0.3678774965223215 NRMSE: 0.1810714813539214 MAPE: 199.56716108312972 Predictor: RandomForests Pearson Correlation: 0.5749455998545075 Spearman Correlation: 0.592504273825388 Coefficient of Determination: 0.30694618856596667 RMSE: 0.39769773971346695 NRMSE: 0.1087440739238232 MAPE: 235.54871055429544 Pearson Correlation: 0.408409834324933 Spearman Correlation: 0.32077956084240455 Coefficient of Determination: 0.1541628574918943 RMSE: 0.35369668960947587 NRMSE: 0.17409160425141673 MAPE: 235.07872096060925 Fold: 5 Protein: RB1 x_train_column_count: 371 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.8317518643147351 Spearman Correlation: 0.7597441320669143 Coefficient of Determination: 0.6918111637910375 RMSE: 0.1298518302116713 NRMSE: 0.06414875296368065 MAPE: 323.44274069646343 Pearson Correlation: 0.11634708484278043 Spearman Correlation: 0.12236312173468497 Coefficient of Determination: -1.4631122606301177 RMSE: 0.3772432596608072 NRMSE: 0.19020796425226752 MAPE: 1890.9544327297979 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: RandomForests Pearson Correlation: 0.5965999450363038 Spearman Correlation: 0.4460678591571146 Coefficient of Determination: 0.20414087701589445 RMSE: 0.20866889838042393 NRMSE: 0.10308556753947126 MAPE: 148.65124954812745 Pearson Correlation: 0.03277263994947263 Spearman Correlation: 0.06947468172919863 Coefficient of Determination: -0.10732740711026412 RMSE: 0.2529399395214556 NRMSE: 0.12753359998459937 MAPE: 273.33423820737823 Protein: CDH1 x_train_column_count: 836 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.454967526986674e-15 NRMSE: 7.093671422863401e-16 MAPE: 2.4623449793079476e-12 Pearson Correlation: 0.3504459326612748 Spearman Correlation: 0.306440229928054 Coefficient of Determination: -0.7774210354824331 RMSE: 1.5488416184723315 NRMSE: 0.30458429892673333 MAPE: 3156.3048302344077 Predictor: ElasticNet Pearson Correlation: 0.7266551247196824 Spearman Correlation: 0.6760816862876752 Coefficient of Determination: 0.4462646610830311 RMSE: 0.8379489967200725 NRMSE: 0.13342711963314424 MAPE: 206.79772164683453 Pearson Correlation: 0.5390809864397121 Spearman Correlation: 0.555715158543124 Coefficient of Determination: 0.26347218785611637 RMSE: 0.9970258709041528 NRMSE: 0.19606809520051777 MAPE: 820.5708462663862 Predictor: RandomForests Pearson Correlation: 0.7880643798131389 Spearman Correlation: 0.7005427928972505 Coefficient of Determination: 0.6158969123229191 RMSE: 0.6978954455361632 NRMSE: 0.1111263089608871 MAPE: 138.8624794310874 Pearson Correlation: 0.6373054357471448 Spearman Correlation: 0.5630718587513561 Coefficient of Determination: 0.3948137677269272 RMSE: 0.9037667758491557 NRMSE: 0.17772841750391452 MAPE: 336.9709126967755 Protein: CDH2 x_train_column_count: 474 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.9410509786138535 Spearman Correlation: 0.9226169238482473 Coefficient of Determination: 0.8855769443500913 RMSE: 0.1214831945482306 NRMSE: 0.05966465033555846 MAPE: 340.0479778776273 Pearson Correlation: 0.13144084076128118 Spearman Correlation: 0.11514123011671205 Coefficient of Determination: -3.1480157151320407 RMSE: 0.8494769769956638 NRMSE: 0.3176624261898786 MAPE: 5845.679194093277 Predictor: ElasticNet Pearson Correlation: 0.23221614978546967 Spearman Correlation: 0.2444401863833733 Coefficient of Determination: 0.0009905499537362639 RMSE: 0.3589584913319304 NRMSE: 0.17629708331218033 MAPE: 197.487552145442 Pearson Correlation: -0.04263508250691145 Spearman Correlation: -0.07257705529632608 Coefficient of Determination: -0.015746119601998343 RMSE: 0.4203625348876348 NRMSE: 0.1571948226119084 MAPE: 600.7699587126888 Predictor: RandomForests Pearson Correlation: 0.6785269262889105 Spearman Correlation: 0.609916054119794 Coefficient of Determination: 0.18164516472413417 RMSE: 0.32488544815024617 NRMSE: 0.15956261880568054 MAPE: 495.4766685268787 Pearson Correlation: 0.11066317527196014 Spearman Correlation: 0.11659262159465116 Coefficient of Determination: -0.0065618770901907375 RMSE: 0.4184577881806257 NRMSE: 0.15648254143583032 MAPE: 801.818100876645 Protein: CDH3 x_train_column_count: 75 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.5508034122964364 Spearman Correlation: 0.5541673296340477 Coefficient of Determination: 0.3033843989973981 RMSE: 0.1700717309048601 NRMSE: 0.11931843948536518 MAPE: 744.1943748327363 Pearson Correlation: 0.4023421217849817 Spearman Correlation: 0.39993266748961964 Coefficient of Determination: 0.1326610019173461 RMSE: 0.20804741828997972 NRMSE: 0.18770235953949396 MAPE: 220.8517087236633 Predictor: ElasticNet Pearson Correlation: 0.3741009057856108 Spearman Correlation: 0.3911173294385048 Coefficient of Determination: 0.026598873743802653 RMSE: 0.20103952790470367 NRMSE: 0.1410447381045516 MAPE: 127.83500590491951 Pearson Correlation: 0.36793519379187806 Spearman Correlation: 0.3687552213868004 Coefficient of Determination: 0.01532970157787883 RMSE: 0.2216732624206902 NRMSE: 0.19999572571088714 MAPE: 116.5652883885615 Predictor: RandomForests Pearson Correlation: 0.5173937655382825 Spearman Correlation: 0.5408788632913746 Coefficient of Determination: 0.22944641589597048 RMSE: 0.17886977305173116 NRMSE: 0.12549094478007744 MAPE: 414.8585871122312 Pearson Correlation: 0.4326336687210953 Spearman Correlation: 0.44842205015025133 Coefficient of Determination: 0.1565084946338191 RMSE: 0.20516735071924774 NRMSE: 0.18510393518459003 MAPE: 211.53182388739688 Protein: PTEN x_train_column_count: 886 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.422649364060355e-15 NRMSE: 5.351652512016816e-16 MAPE: 5.037952729652862e-12 Pearson Correlation: 0.2658121400808326 Spearman Correlation: 0.2771181685557177 Coefficient of Determination: -0.6991461707314943 RMSE: 0.9407512545859544 NRMSE: 0.18197757168561482 MAPE: 1110.1298608669204 Predictor: ElasticNet Pearson Correlation: 0.43905403916963115 Spearman Correlation: 0.42218459408133546 Coefficient of Determination: 0.07879313786480924 RMSE: 0.5461499463648739 NRMSE: 0.08539597316314188 MAPE: 339.4661651305673 Pearson Correlation: 0.41019954856345164 Spearman Correlation: 0.43077594483721743 Coefficient of Determination: 0.05538908332640491 RMSE: 0.7014325505188561 NRMSE: 0.13568410525357014 MAPE: 427.3478275645001 Predictor: RandomForests Pearson Correlation: 0.5819771470150942 Spearman Correlation: 0.5467377872862089 Coefficient of Determination: 0.2900196057166555 RMSE: 0.479464537597846 NRMSE: 0.07496904661056149 MAPE: 263.4419350409604 Pearson Correlation: 0.3954619183059733 Spearman Correlation: 0.45036222396787995 Coefficient of Determination: 0.14130125812540162 RMSE: 0.6687747210990298 NRMSE: 0.12936682163011254 MAPE: 399.53375732983966 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.8562034672316303 Spearman Correlation: 0.8146234945991302 Coefficient of Determination: 0.7330843772994652 RMSE: 0.10356964548954534 NRMSE: 0.06672227121246277 MAPE: 340.56952530517754 Pearson Correlation: 0.07530421890658907 Spearman Correlation: 0.10326562675345079 Coefficient of Determination: -3.288833464381004 RMSE: 0.34395900388092326 NRMSE: 0.4498254153938707 MAPE: 943.6000937040408 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: RandomForests Pearson Correlation: 0.5374555566427357 Spearman Correlation: 0.509073652277976 Coefficient of Determination: 0.22436690230393408 RMSE: 0.17655241364436364 NRMSE: 0.11373967701360196 MAPE: 175.8557583596619 Pearson Correlation: 0.26472075350013713 Spearman Correlation: 0.2325041459369818 Coefficient of Determination: -0.01826073948759821 RMSE: 0.1675971351685284 NRMSE: 0.21918150156088195 MAPE: 164.81814649411595 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.253970171212126e-15 NRMSE: 1.0832344914089598e-15 MAPE: 3.718579126098466e-12 Pearson Correlation: 0.054035346931626774 Spearman Correlation: 0.09392386438733652 Coefficient of Determination: -6.5785143854683765 RMSE: 1.6681244811544276 NRMSE: 0.4197489950314354 MAPE: 2240.9027566880955 Predictor: ElasticNet Pearson Correlation: 0.5321376583519405 Spearman Correlation: 0.4195910984881396 Coefficient of Determination: 0.20545362356401542 RMSE: 0.6058552653815459 NRMSE: 0.15427548709774283 MAPE: 201.05815753196077 Pearson Correlation: 0.28680659171954914 Spearman Correlation: 0.2279355104178357 Coefficient of Determination: 0.08211531649024728 RMSE: 0.5805377666848698 NRMSE: 0.14608031168940636 MAPE: 244.19639648642763 Predictor: RandomForests Pearson Correlation: 0.7056450231069856 Spearman Correlation: 0.6564174575454519 Coefficient of Determination: 0.49359949086383403 RMSE: 0.4836779930041094 NRMSE: 0.12316416516108819 MAPE: 181.1020306473699 Pearson Correlation: 0.36854120386969186 Spearman Correlation: 0.32810964752691846 Coefficient of Determination: -0.07496682044992875 RMSE: 0.6282520960725495 NRMSE: 0.1580866349796305 MAPE: 478.66457497203606 Protein: TP53 x_train_column_count: 1001 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.6434013121754137e-15 NRMSE: 4.1796620264386526e-16 MAPE: 7.720763723287795e-12 Pearson Correlation: 0.24313954701855237 Spearman Correlation: 0.14658287509819326 Coefficient of Determination: -0.5312488894848961 RMSE: 0.6535468354564562 NRMSE: 0.17504937336452558 MAPE: 392.59663605820566 Predictor: ElasticNet Pearson Correlation: 0.493363668131485 Spearman Correlation: 0.48738155159620955 Coefficient of Determination: 0.18960746035593656 RMSE: 0.38150604948313155 NRMSE: 0.09702842124243535 MAPE: 656.8446636117651 Pearson Correlation: 0.46652205540742325 Spearman Correlation: 0.43634708662202776 Coefficient of Determination: 0.14974091181099058 RMSE: 0.4870005638788619 NRMSE: 0.13044075636235755 MAPE: 157.5658988123128 Predictor: RandomForests Pearson Correlation: 0.6530727746641888 Spearman Correlation: 0.5959312206892813 Coefficient of Determination: 0.3758632534461287 RMSE: 0.33480627429801607 NRMSE: 0.08515126892800327 MAPE: 742.679459909424 Pearson Correlation: 0.49415112658010396 Spearman Correlation: 0.3946662610088742 Coefficient of Determination: 0.21459470396151326 RMSE: 0.4680591455079002 NRMSE: 0.12536738864548017 MAPE: 148.29271555874683 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 2.9137521208990404e-15 NRMSE: 5.731219749998113e-16 MAPE: 3.70782409724583e-12 Pearson Correlation: 0.2721825192874613 Spearman Correlation: 0.24998566066908565 Coefficient of Determination: -0.8149687214472985 RMSE: 0.9129457476287389 NRMSE: 0.29238684073057464 MAPE: 342.29811849767935 Predictor: ElasticNet Pearson Correlation: 0.5528786428690461 Spearman Correlation: 0.5342535728717503 Coefficient of Determination: 0.20670555676859492 RMSE: 0.6733300057776254 NRMSE: 0.13244099248183033 MAPE: 771.7518021349326 Pearson Correlation: 0.5416559521710368 Spearman Correlation: 0.5134652551777454 Coefficient of Determination: 0.2093564035386033 RMSE: 0.6025606634796759 NRMSE: 0.19298058970201537 MAPE: 255.9694070953486 Predictor: RandomForests Pearson Correlation: 0.6255295564125625 Spearman Correlation: 0.6072170347705104 Coefficient of Determination: 0.2695428709283161 RMSE: 0.6461124779848941 NRMSE: 0.12708742682629703 MAPE: 648.7392605197148 Pearson Correlation: 0.476995013527657 Spearman Correlation: 0.44343445678873805 Coefficient of Determination: 0.19098672756440327 RMSE: 0.6095203653633464 NRMSE: 0.19520955593738976 MAPE: 254.01594966021239 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.9489212881094693 Spearman Correlation: 0.8709361182439848 Coefficient of Determination: 0.9004516110273343 RMSE: 0.14160000875448378 NRMSE: 0.05043633437381435 MAPE: 29.8942842639769 Pearson Correlation: 0.7178647628882102 Spearman Correlation: 0.44009276923652424 Coefficient of Determination: 0.2724825213501558 RMSE: 0.5527912058673922 NRMSE: 0.13340521897516525 MAPE: 144.48144341103475 Predictor: ElasticNet Pearson Correlation: 0.6970293895461044 Spearman Correlation: 0.6161430253344963 Coefficient of Determination: 0.40062997610173956 RMSE: 0.3474510845355542 NRMSE: 0.12375817792895963 MAPE: 75.84940533485421 Pearson Correlation: 0.6200537244015452 Spearman Correlation: 0.6518460329929302 Coefficient of Determination: 0.24934707849089 RMSE: 0.5615119446468297 NRMSE: 0.13550979671473073 MAPE: 102.58061850035702 Predictor: RandomForests Pearson Correlation: 0.8642743809375889 Spearman Correlation: 0.712444018843912 Coefficient of Determination: 0.7437307296664993 RMSE: 0.2271927290484665 NRMSE: 0.08092350099678236 MAPE: 54.02401511592223 Pearson Correlation: 0.7836002503138819 Spearman Correlation: 0.7325660649467042 Coefficient of Determination: 0.5834274407327997 RMSE: 0.4182969893042453 NRMSE: 0.10094770116182285 MAPE: 76.3162680747975 Protein: CCND1 x_train_column_count: 859 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 9.44787870305914e-16 NRMSE: 5.950744925337059e-16 MAPE: 3.756724984070302e-12 Pearson Correlation: 0.0949837787145281 Spearman Correlation: 0.012391675706679636 Coefficient of Determination: -0.9564941683898012 RMSE: 0.38599684392926714 NRMSE: 0.24660868371811448 MAPE: 483.78376895175046 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: RandomForests Pearson Correlation: 0.5735393384007444 Spearman Correlation: 0.5797095323466234 Coefficient of Determination: 0.2916794941021762 RMSE: 0.19156800529111231 NRMSE: 0.1206590782091557 MAPE: 511.53426213392777 Pearson Correlation: 0.3587291669929732 Spearman Correlation: 0.28818065063155407 Coefficient of Determination: 0.1245046338260326 RMSE: 0.2582090148569781 NRMSE: 0.16496659565874325 MAPE: 233.58768498104726 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 5.2197141332821866e-15 NRMSE: 8.89264209973625e-16 MAPE: 7.114712972684909e-12 Pearson Correlation: 0.42732276518029816 Spearman Correlation: 0.25366151697652095 Coefficient of Determination: -2.2073737763900323 RMSE: 1.5540125959551496 NRMSE: 0.3438461325268613 MAPE: 2237.607895282257 Predictor: ElasticNet Pearson Correlation: 0.7380636157298364 Spearman Correlation: 0.6007712750258275 Coefficient of Determination: 0.3704262559695707 RMSE: 0.8156104115187992 NRMSE: 0.1389526571236689 MAPE: 828.9836135910851 Pearson Correlation: 0.6245990085656 Spearman Correlation: 0.5455654060524446 Coefficient of Determination: 0.3026212729607579 RMSE: 0.7246263046684513 NRMSE: 0.160333290113608 MAPE: 432.6658887272196 Predictor: RandomForests Pearson Correlation: 0.8516880218712113 Spearman Correlation: 0.6972120514795691 Coefficient of Determination: 0.7205317513932848 RMSE: 0.5434075821222613 NRMSE: 0.09257842515328914 MAPE: 498.8613571595705 Pearson Correlation: 0.8067774348726954 Spearman Correlation: 0.6311619060503226 Coefficient of Determination: 0.6297988075689844 RMSE: 0.5279571237841779 NRMSE: 0.11681759570398892 MAPE: 206.58630100845863 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.7416978110336306 Spearman Correlation: 0.7229001567368054 Coefficient of Determination: 0.550115642892079 RMSE: 0.3145141114520203 NRMSE: 0.08487833161569795 MAPE: 189.26843431600713 Pearson Correlation: 0.3593589698101202 Spearman Correlation: 0.4179378795246824 Coefficient of Determination: -0.5105449112038107 RMSE: 0.512473081016475 NRMSE: 0.24795004984250113 MAPE: 326.2058289999269 Predictor: ElasticNet Pearson Correlation: 0.40321290795769243 Spearman Correlation: 0.4060465950422316 Coefficient of Determination: 0.08888729753152969 RMSE: 0.4475852234793049 NRMSE: 0.1207904053950794 MAPE: 236.1063857293186 Pearson Correlation: 0.4950571071097122 Spearman Correlation: 0.5032007880397512 Coefficient of Determination: 0.07561303248755091 RMSE: 0.4008954652852179 NRMSE: 0.19396540868437706 MAPE: 231.14093563056701 Predictor: RandomForests Pearson Correlation: 0.532600764858108 Spearman Correlation: 0.5117946832911409 Coefficient of Determination: 0.2624970549080692 RMSE: 0.4026906714686944 NRMSE: 0.10867465435388612 MAPE: 252.17048478389822 Pearson Correlation: 0.538081735650257 Spearman Correlation: 0.566258930909363 Coefficient of Determination: 0.2407984168365016 RMSE: 0.36331454875968805 NRMSE: 0.1757826192446866 MAPE: 240.03589656852267
TMM
scenario = Scenario.NMostVariableGenes_Mutations
normalizeTechnique = NormalizeTechnique.TMM
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12.2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 6.676054 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SH-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SJ-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SK-01 | 6.676054 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SQ-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 371 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'LINC01119', 'IQUB', 'NKPD1', 'LINC01341', 'SOX8', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'PPP1R3G', 'C19ORF18', 'FXYD1', 'RNF138P1', 'CCIN', 'MYCBPAP', 'ETV2', 'XPNPEP2', 'TEKT3', 'STKLD1', 'SLC30A8', 'UGT8', 'SLC28A3', 'CCR8', 'METTL7B', 'HEPACAM2', 'UBE2Q2P1', 'TEX14', 'PLP1', 'SLC25A18', 'JPH4', 'IDI2.AS1', 'CASQ1', 'S100A3', 'LINC00482', 'LRIT3', 'GLIS1', 'SGK2', 'CCDC36', 'NR1I3', 'ALOXE3', 'ZNF843', 'CACNG1', 'MS4A15', 'WNT2B', 'PBX4', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'LGALS2', 'PYGO1', 'TMEM92', 'FUT9', 'ADAMTS8', 'BCHE', 'AOC2', 'GJB1', 'C9ORF43', 'CCDC151', 'FCRL6', 'PNCK', 'PITX2', 'TNNI3K', 'FAM189A1', 'DQX1', 'LPAR3', 'CKMT2', 'ABCA17P', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'NLRP12', 'C1ORF101', 'CLDN9', 'IYD', 'ZNF835', 'SLC6A20', 'OTOA', 'CA3', 'SPIB', 'FAM95B1', 'FAM90A1', 'C1ORF95', 'C2CD4A', 'RYR2', 'PCDH9', 'CCDC158', 'CLEC3A', 'SCN2B', 'CLECL1', 'PCSK1N', 'ULBP3', 'SVOPL', 'LINC01550', 'GSDMC', 'ARC', 'TAS1R3', 'CCDC65', 'IL20RB', 'DDX11L2', 'VSIG1', 'AURKC', 'TTC16', 'ZCCHC18', 'PDE1C', 'ALDH8A1', 'COLCA2', 'PCYT1B', 'MYOZ1', 'BPIFB2', 'KNDC1', 'B3GALT5.AS1', 'DUOXA1', 'CRYGS', 'GSTM1', 'PPP1R36', 'KLHL4', 'LOC148709', 'LOC441455', 'CPEB1', 'OR7E91P', 'IL22RA1', 'HOXD3', 'TARP', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.8635047254262793 Spearman Correlation: 0.7817359072842056 Coefficient of Determination: 0.7456404108335138 RMSE: 0.11302373621237617 NRMSE: 0.042803914490579874 MAPE: 467.5899976151151 Pearson Correlation: 0.2294008149453472 Spearman Correlation: 0.27141742269046926 Coefficient of Determination: -0.980752390350365 RMSE: 0.39472597277578453 NRMSE: 0.19500055466808836 MAPE: 529.5990094643992 Predictor: ElasticNet Pearson Correlation: 0.4595387050828242 Spearman Correlation: 0.40741346330588746 Coefficient of Determination: 0.14701204528826928 RMSE: 0.20697459974002266 NRMSE: 0.07838462402576127 MAPE: 260.6314056597216 Pearson Correlation: 0.38810526420542496 Spearman Correlation: 0.4092039800995026 Coefficient of Determination: 0.06548921194820034 RMSE: 0.27112700020288766 NRMSE: 0.1339408072219499 MAPE: 120.88015870538096 Predictor: RandomForests Pearson Correlation: 0.452100184345328 Spearman Correlation: 0.43109309116811323 Coefficient of Determination: 0.1132070476273771 RMSE: 0.21103608361349716 NRMSE: 0.07992277357072415 MAPE: 212.88616407682733 Pearson Correlation: 0.3630029259810247 Spearman Correlation: 0.3847819724904888 Coefficient of Determination: 0.0387554017311742 RMSE: 0.27497775725477674 NRMSE: 0.13584313899842246 MAPE: 144.38481934830747 Protein: CDH1 x_train_column_count: 836 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'LINC01119', 'IQUB', 'NKPD1', 'LINC01341', 'SOX8', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'PPP1R3G', 'C19ORF18', 'FXYD1', 'RNF138P1', 'CCIN', 'MYCBPAP', 'ETV2', 'XPNPEP2', 'TEKT3', 'STKLD1', 'SLC30A8', 'UGT8', 'SLC28A3', 'CCR8', 'METTL7B', 'HEPACAM2', 'UBE2Q2P1', 'TEX14', 'PLP1', 'SLC25A18', 'JPH4', 'IDI2.AS1', 'CASQ1', 'S100A3', 'LINC00482', 'LRIT3', 'GLIS1', 'SGK2', 'CCDC36', 'NR1I3', 'ALOXE3', 'ZNF843', 'CACNG1', 'MS4A15', 'WNT2B', 'PBX4', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'LGALS2', 'PYGO1', 'TMEM92', 'FUT9', 'ADAMTS8', 'BCHE', 'AOC2', 'GJB1', 'C9ORF43', 'CCDC151', 'FCRL6', 'PNCK', 'PITX2', 'TNNI3K', 'FAM189A1', 'DQX1', 'LPAR3', 'CKMT2', 'ABCA17P', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'NLRP12', 'C1ORF101', 'CLDN9', 'IYD', 'ZNF835', 'SLC6A20', 'OTOA', 'CA3', 'SPIB', 'FAM95B1', 'FAM90A1', 'C1ORF95', 'C2CD4A', 'RYR2', 'PCDH9', 'CCDC158', 'CLEC3A', 'SCN2B', 'CLECL1', 'PCSK1N', 'ULBP3', 'SVOPL', 'LINC01550', 'GSDMC', 'ARC', 'TAS1R3', 'CCDC65', 'IL20RB', 'DDX11L2', 'VSIG1', 'AURKC', 'TTC16', 'ZCCHC18', 'PDE1C', 'ALDH8A1', 'COLCA2', 'PCYT1B', 'MYOZ1', 'BPIFB2', 'KNDC1', 'B3GALT5.AS1', 'DUOXA1', 'CRYGS', 'GSTM1', 'PPP1R36', 'KLHL4', 'LOC148709', 'LOC441455', 'CPEB1', 'OR7E91P', 'IL22RA1', 'HOXD3', 'TARP', 'FAM57B', 'LOC90768', 'CAMP', 'JPH3', 'LUZP2', 'FUT7', 'IL12RB2', 'PLA2G5', 'RIMS1', 'FLJ37201', 'LBX2', 'SCARA5', 'RELN', 'HOXB13', 'CD177', 'IGSF5', 'TUBB8', 'SLC22A18AS', 'HIST1H2BN', 'ZBED3.AS1', 'GPR18', 'ASTN1', 'ZC3H12D', 'KCNE1', 'MNX1', 'TCHH', 'CIDEA', 'ONECUT2', 'GAL', 'KCNE2', 'SP5', 'WDR72', 'BTBD8', 'CHRNA6', 'FAM135B', 'IRX4', 'C10ORF128', 'SLC16A10', 'RSPH4A', 'MGC16142', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'CCDC7', 'MGAT5B', 'YPEL4', 'GBP1P1', 'DCSTAMP', 'CELF5', 'CXXC4', 'GRIN2C', 'GPR3', 'SKIDA1', 'OBP2B', 'CXCR5', 'SLC35F1', 'PYDC1', 'SLC30A2', 'HOXA11', 'NIPAL1', 'ATP13A5', 'CCDC153', 'FOXJ1', 'STRC', 'SRL', 'WT1', 'PCSK9', 'PCAT18', 'TNFRSF9', 'LRP1B', 'RPGRIP1', 'INSM1', 'GPR174', 'CNNM1', 'PCK1', 'NOXO1', 'SLC18A2', 'C17ORF104', 'SLC25A53', 'FOXD4', 'DMRT3', 'PPP4R4', 'MARCO', 'GPX2', 'LBP', 'IL20', 'COL23A1', 'INHA', 'FOXD1', 'NOS2', 'PKNOX2', 'BTLA', 'TNFRSF17', 'CRISP3', 'ADH1C', 'KLHL14', 'AVPR2', 'CXCL2', 'GLOD5', 'MYBPC1', 'PARP15', 'GPLD1', 'PFN1P2', 'GPR55', 'CST9', 'SLCO4C1', 'STEAP1B', 'BCL2L14', 'SLC23A1', 'C2ORF40', 'DHRS4L1', 'SCN3A', 'AMH', 'CXCR2P1', 'ZNF98', 'VAT1L', 'ULBP2', 'VSIG2', 'ZNF454', 'RNF212', 'TPSG1', 'VGLL1', 'CYSLTR2', 'HAP1', 'P2RX1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'TMEM105', 'ORM1', 'FAM178B', 'DKK1', 'ZNF488', 'IL23A', 'DPY19L2P2', 'AMBP', 'PRKG2', 'CXCL1', 'SIGLEC17P', 'CRYM', 'SUCNR1', 'DEPDC4', 'SPDYE1', 'FABP7', 'LRRC2', 'GPBAR1', 'CTCFL', 'BRINP1', 'BDKRB1', 'LRGUK', 'XIRP1', 'ADAMTS18', 'VWDE', 'LINC00930', 'FUT6', 'RERGL', 'TENM1', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'KIAA0319', 'NUGGC', 'CECR2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'PKD1L1', 'SSUH2', 'WSCD2', 'CBLN2', 'ECEL1', 'SPESP1', 'SEC14L5', 'ABHD11.AS1', 'FSCN2', 'DMRT2', 'CCL17', 'ZNF732', 'FAM162B', 'PIANP', 'HOXD4', 'GNB3', 'TMEM217', 'CTSG', 'GRIA3', 'RSPO1', 'RGS6', 'SERPINA6', 'ADAMTS19', 'IL1R2', 'MT1A', 'RNF175', 'ADAM32', 'COL2A1', 'CHRNB2', 'FLJ12825', 'POM121L9P', 'PFKFB1', 'RASL10A', 'HECTD2.AS1', 'PRSS21', 'DIRC3', 'LRRC16B', 'CYP46A1', 'SMIM5', 'FOXC2', 'CAPN11', 'ZNF804A', 'IGF2BP3', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'CYSRT1', 'VIPR2', 'GPR87', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'SLC13A2', 'XKR9', 'CA9', 'HTR7', 'HOGA1', 'EMX1', 'WIPF3', 'CEP83.AS1', 'ZSCAN1', 'ZBTB16', 'CITED1', 'OTUD7A', 'TMEM40', 'CYP26A1', 'TMSB15A', 'WFDC3', 'MAPT.IT1', 'CDHR1', 'ANKK1', 'GZMM', 'ROPN1L', 'PVALB', 'FIRRE', 'M1AP', 'MYO3B', 'INE2', 'CRTAC1', 'MRAP2', 'IGSF22', 'RFX8', 'RBM12B.AS1', 'SPAG17', 'TTC23L', 'HEATR4', 'PYGM', 'MROH7', 'PCDHA12', 'CFAP61', 'BTC', 'KCNT2', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'B3GAT1', 'OPCML', 'SRSF12', 'NWD1', 'LRRC4B', 'CIDEC', 'CCBE1', 'ADGRF1', 'CLEC4E', 'MIA', 'LINC00173', 'TMEM59L', 'HPDL', 'TSPAN8', 'RNF182', 'FRMPD1', 'GALNT13', 'SMC1B', 'KCNA6', 'KLK6', 'LSAMP', 'LOC613037', 'ABCC6P2', 'FASLG', 'IL11', 'NLRP7', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'COL28A1', 'C15ORF56', 'FAM83A', 'PSORS1C1', 'ANO5', 'SLC16A11', 'PTCHD1', 'SLC6A14', 'SLC24A5', 'C9ORF47', 'ADGRG2', 'TMPRSS4', 'TUSC5', 'LINC00908', 'RUFY4', 'CYP4F12', 'INTS4P2', 'PIK3C2G', 'IGSF1', 'KCNQ3', 'LOC100133669', 'VENTX', 'MYOM2', 'FAM157A', 'NBPF4', 'EBF2', 'MAG', 'DSCAML1', 'PCDHA5', 'PTPRN', 'KLK7', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'SFTPA2', 'CNTN2', 'ZBTB20', 'FAM19A2', 'NKX3.2', 'DLX5', 'PLAC1', 'CCNI2', 'BRE.AS1', 'OR2W3', 'SLC6A17', 'RYR3', 'GHRLOS', 'ABCC2', 'PTPRR', 'ABCD2', 'TFAP2E', 'CD160', 'GRIA2', 'CD1A', 'DEFB1', 'CCDC144A', 'RGS9', 'DLK2', 'CACNA1I', 'GGT3P', 'CDKL2', 'MYO16', 'PWAR5', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'CABP4', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CHRNA10', 'TCEAL2', 'FKBP1AP1', 'UNC13A', 'AGBL4', 'SLC39A2', 'XCL2', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'ZNF727', 'LINC00202.1', 'KCNH3', 'ARL9', 'TM6SF2', 'MAK', 'SNORD116.4', 'TCN1', 'P2RY12', 'GRID2IP', 'MPL', 'HRCT1', 'PCBP3', 'SYCE3', 'TCTEX1D1', 'ELOVL3', 'GPM6A', 'CD70', 'NOX5', 'SLC46A2', 'SYCE2', 'GRIN2A', 'ARMC3', 'JAKMIP1', 'PGLYRP2', 'TIGD4', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'KLF3.AS1', 'SOSTDC1', 'ASIC3', 'LONRF3', 'LRRC43', 'AGAP7P', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'LOC400927', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'ACHE', 'CEACAM7', 'RIMS2', 'OLFM4', 'CTAGE11P', 'TMEM145', 'CD40LG', 'C6ORF52', 'HRC', 'BEGAIN', 'VN1R1', 'GPR82', 'CXADRP3', 'PAH', 'CHODL', 'TTBK1', 'LOC285593', 'MLLT4.AS1', 'CHST9', 'TTYH1', 'HIST1H2BH', 'APOBEC3A', 'GABRB3', 'ADGRL3', 'SLC25A34', 'BRSK2', 'TRH', 'MAPK4', 'CAMK4', 'DGCR5', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'EPYC', 'GBP6', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 5.611340111124624e-15 NRMSE: 9.43193335539412e-16 MAPE: 5.0547000232638306e-12 Pearson Correlation: 0.35474548567041786 Spearman Correlation: 0.28671349136669594 Coefficient of Determination: -0.4777346407309775 RMSE: 1.4104916119715922 NRMSE: 0.22844929091568014 MAPE: 659.115186474354 Predictor: ElasticNet Pearson Correlation: 0.9167817951607486 Spearman Correlation: 0.8748804677573688 Coefficient of Determination: 0.8005470840529061 RMSE: 0.5039592215617211 NRMSE: 0.08470899459797306 MAPE: 359.0783942881882 Pearson Correlation: 0.5503615476898589 Spearman Correlation: 0.4643790849673204 Coefficient of Determination: 0.2895349036310362 RMSE: 0.978010807938426 NRMSE: 0.15840283890033138 MAPE: 388.2463767706927 Predictor: RandomForests Pearson Correlation: 0.6442586427286383 Spearman Correlation: 0.5842240962471854 Coefficient of Determination: 0.40812305026542783 RMSE: 0.868142294652709 NRMSE: 0.14592343547185535 MAPE: 284.03970988810056 Pearson Correlation: 0.6688762619131711 Spearman Correlation: 0.5790801550804627 Coefficient of Determination: 0.4295292075537963 RMSE: 0.8763729973596167 NRMSE: 0.1419411417446174 MAPE: 193.9256067967293 Protein: CDH2 x_train_column_count: 474 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'LINC01119', 'IQUB', 'NKPD1', 'LINC01341', 'SOX8', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'PPP1R3G', 'C19ORF18', 'FXYD1', 'RNF138P1', 'CCIN', 'MYCBPAP', 'ETV2', 'XPNPEP2', 'TEKT3', 'STKLD1', 'SLC30A8', 'UGT8', 'SLC28A3', 'CCR8', 'METTL7B', 'HEPACAM2', 'UBE2Q2P1', 'TEX14', 'PLP1', 'SLC25A18', 'JPH4', 'IDI2.AS1', 'CASQ1', 'S100A3', 'LINC00482', 'LRIT3', 'GLIS1', 'SGK2', 'CCDC36', 'NR1I3', 'ALOXE3', 'ZNF843', 'CACNG1', 'MS4A15', 'WNT2B', 'PBX4', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'LGALS2', 'PYGO1', 'TMEM92', 'FUT9', 'ADAMTS8', 'BCHE', 'AOC2', 'GJB1', 'C9ORF43', 'CCDC151', 'FCRL6', 'PNCK', 'PITX2', 'TNNI3K', 'FAM189A1', 'DQX1', 'LPAR3', 'CKMT2', 'ABCA17P', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'NLRP12', 'C1ORF101', 'CLDN9', 'IYD', 'ZNF835', 'SLC6A20', 'OTOA', 'CA3', 'SPIB', 'FAM95B1', 'FAM90A1', 'C1ORF95', 'C2CD4A', 'RYR2', 'PCDH9', 'CCDC158', 'CLEC3A', 'SCN2B', 'CLECL1', 'PCSK1N', 'ULBP3', 'SVOPL', 'LINC01550', 'GSDMC', 'ARC', 'TAS1R3', 'CCDC65', 'IL20RB', 'DDX11L2', 'VSIG1', 'AURKC', 'TTC16', 'ZCCHC18', 'PDE1C', 'ALDH8A1', 'COLCA2', 'PCYT1B', 'MYOZ1', 'BPIFB2', 'KNDC1', 'B3GALT5.AS1', 'DUOXA1', 'CRYGS', 'GSTM1', 'PPP1R36', 'KLHL4', 'LOC148709', 'LOC441455', 'CPEB1', 'OR7E91P', 'IL22RA1', 'HOXD3', 'TARP', 'FAM57B', 'LOC90768', 'CAMP', 'JPH3', 'LUZP2', 'FUT7', 'IL12RB2', 'PLA2G5', 'RIMS1', 'FLJ37201', 'LBX2', 'SCARA5', 'RELN', 'HOXB13', 'CD177', 'IGSF5', 'TUBB8', 'SLC22A18AS', 'HIST1H2BN', 'ZBED3.AS1', 'GPR18', 'ASTN1', 'ZC3H12D', 'KCNE1', 'MNX1', 'TCHH', 'CIDEA', 'ONECUT2', 'GAL', 'KCNE2', 'SP5', 'WDR72', 'BTBD8', 'CHRNA6', 'FAM135B', 'IRX4', 'C10ORF128', 'SLC16A10', 'RSPH4A', 'MGC16142', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'CCDC7', 'MGAT5B', 'YPEL4', 'GBP1P1', 'DCSTAMP', 'CELF5', 'CXXC4', 'GRIN2C', 'GPR3', 'SKIDA1', 'OBP2B', 'CXCR5', 'SLC35F1', 'PYDC1', 'SLC30A2', 'HOXA11', 'NIPAL1', 'ATP13A5', 'CCDC153', 'FOXJ1', 'STRC', 'SRL', 'WT1', 'PCSK9', 'PCAT18', 'TNFRSF9', 'LRP1B', 'RPGRIP1', 'INSM1', 'GPR174', 'CNNM1', 'PCK1', 'NOXO1', 'SLC18A2', 'C17ORF104', 'SLC25A53', 'FOXD4', 'DMRT3', 'PPP4R4', 'MARCO', 'GPX2', 'LBP', 'IL20', 'COL23A1', 'INHA', 'FOXD1', 'NOS2', 'PKNOX2', 'BTLA', 'TNFRSF17', 'CRISP3', 'ADH1C', 'KLHL14', 'AVPR2', 'CXCL2', 'GLOD5', 'MYBPC1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.9534693063184488 Spearman Correlation: 0.9413656709216642 Coefficient of Determination: 0.9091037180913835 RMSE: 0.1119114565853062 NRMSE: 0.04134349140716259 MAPE: 945.3507545503473 Pearson Correlation: 0.17481405713026651 Spearman Correlation: 0.18135791630084871 Coefficient of Determination: -4.855607945687453 RMSE: 0.907716887931919 NRMSE: 0.4684506827330954 MAPE: 694.4305797950124 Predictor: ElasticNet Pearson Correlation: 0.6583832203671176 Spearman Correlation: 0.6605778576631258 Coefficient of Determination: 0.34571320292972474 RMSE: 0.30025176377146273 NRMSE: 0.11092212177587499 MAPE: 715.3473908936406 Pearson Correlation: 0.1820104054642951 Spearman Correlation: 0.21490586284264954 Coefficient of Determination: 0.007160909657639047 RMSE: 0.3737694950105397 NRMSE: 0.19289337617306068 MAPE: 130.64174296008505 Predictor: RandomForests Pearson Correlation: 0.4529617722718923 Spearman Correlation: 0.47325981137500533 Coefficient of Determination: 0.133885179666677 RMSE: 0.34545320311413164 NRMSE: 0.12762090647653254 MAPE: 878.1963551849751 Pearson Correlation: 0.21033414446731016 Spearman Correlation: 0.26333528436250125 Coefficient of Determination: 0.04203209697717247 RMSE: 0.3671469281292651 NRMSE: 0.18947562993717557 MAPE: 111.21303032482213 Protein: CDH3 x_train_column_count: 75 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.5397912087135193 Spearman Correlation: 0.5339191149514866 Coefficient of Determination: 0.2913745490044022 RMSE: 0.17576742675081802 NRMSE: 0.12331440951816947 MAPE: 441.4884674780064 Pearson Correlation: 0.470866658341916 Spearman Correlation: 0.4713393815237538 Coefficient of Determination: 0.21044691185555686 RMSE: 0.18178264185800383 NRMSE: 0.13913605089743195 MAPE: 520.3589224752473 Predictor: ElasticNet Pearson Correlation: 0.4662997030801478 Spearman Correlation: 0.47792261714939777 Coefficient of Determination: 0.18464956568309954 RMSE: 0.18853942354630812 NRMSE: 0.13227495057129998 MAPE: 175.82312291109355 Pearson Correlation: 0.5062651739558789 Spearman Correlation: 0.524934152765584 Coefficient of Determination: 0.20739344622948075 RMSE: 0.18213380977466065 NRMSE: 0.1394048340806122 MAPE: 278.897757986947 Predictor: RandomForests Pearson Correlation: 0.4421703366364154 Spearman Correlation: 0.4407830381070928 Coefficient of Determination: 0.15650178379720314 RMSE: 0.19176621910747707 NRMSE: 0.1345387965899682 MAPE: 258.58479419514225 Pearson Correlation: 0.47573524620073404 Spearman Correlation: 0.5009755145839432 Coefficient of Determination: 0.1693955924068088 RMSE: 0.1864484847256676 NRMSE: 0.1427072771931846 MAPE: 256.53935447855105 Protein: PTEN x_train_column_count: 886 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'LINC01119', 'IQUB', 'NKPD1', 'LINC01341', 'SOX8', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'PPP1R3G', 'C19ORF18', 'FXYD1', 'RNF138P1', 'CCIN', 'MYCBPAP', 'ETV2', 'XPNPEP2', 'TEKT3', 'STKLD1', 'SLC30A8', 'UGT8', 'SLC28A3', 'CCR8', 'METTL7B', 'HEPACAM2', 'UBE2Q2P1', 'TEX14', 'PLP1', 'SLC25A18', 'JPH4', 'IDI2.AS1', 'CASQ1', 'S100A3', 'LINC00482', 'LRIT3', 'GLIS1', 'SGK2', 'CCDC36', 'NR1I3', 'ALOXE3', 'ZNF843', 'CACNG1', 'MS4A15', 'WNT2B', 'PBX4', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'LGALS2', 'PYGO1', 'TMEM92', 'FUT9', 'ADAMTS8', 'BCHE', 'AOC2', 'GJB1', 'C9ORF43', 'CCDC151', 'FCRL6', 'PNCK', 'PITX2', 'TNNI3K', 'FAM189A1', 'DQX1', 'LPAR3', 'CKMT2', 'ABCA17P', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'NLRP12', 'C1ORF101', 'CLDN9', 'IYD', 'ZNF835', 'SLC6A20', 'OTOA', 'CA3', 'SPIB', 'FAM95B1', 'FAM90A1', 'C1ORF95', 'C2CD4A', 'RYR2', 'PCDH9', 'CCDC158', 'CLEC3A', 'SCN2B', 'CLECL1', 'PCSK1N', 'ULBP3', 'SVOPL', 'LINC01550', 'GSDMC', 'ARC', 'TAS1R3', 'CCDC65', 'IL20RB', 'DDX11L2', 'VSIG1', 'AURKC', 'TTC16', 'ZCCHC18', 'PDE1C', 'ALDH8A1', 'COLCA2', 'PCYT1B', 'MYOZ1', 'BPIFB2', 'KNDC1', 'B3GALT5.AS1', 'DUOXA1', 'CRYGS', 'GSTM1', 'PPP1R36', 'KLHL4', 'LOC148709', 'LOC441455', 'CPEB1', 'OR7E91P', 'IL22RA1', 'HOXD3', 'TARP', 'FAM57B', 'LOC90768', 'CAMP', 'JPH3', 'LUZP2', 'FUT7', 'IL12RB2', 'PLA2G5', 'RIMS1', 'FLJ37201', 'LBX2', 'SCARA5', 'RELN', 'HOXB13', 'CD177', 'IGSF5', 'TUBB8', 'SLC22A18AS', 'HIST1H2BN', 'ZBED3.AS1', 'GPR18', 'ASTN1', 'ZC3H12D', 'KCNE1', 'MNX1', 'TCHH', 'CIDEA', 'ONECUT2', 'GAL', 'KCNE2', 'SP5', 'WDR72', 'BTBD8', 'CHRNA6', 'FAM135B', 'IRX4', 'C10ORF128', 'SLC16A10', 'RSPH4A', 'MGC16142', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'CCDC7', 'MGAT5B', 'YPEL4', 'GBP1P1', 'DCSTAMP', 'CELF5', 'CXXC4', 'GRIN2C', 'GPR3', 'SKIDA1', 'OBP2B', 'CXCR5', 'SLC35F1', 'PYDC1', 'SLC30A2', 'HOXA11', 'NIPAL1', 'ATP13A5', 'CCDC153', 'FOXJ1', 'STRC', 'SRL', 'WT1', 'PCSK9', 'PCAT18', 'TNFRSF9', 'LRP1B', 'RPGRIP1', 'INSM1', 'GPR174', 'CNNM1', 'PCK1', 'NOXO1', 'SLC18A2', 'C17ORF104', 'SLC25A53', 'FOXD4', 'DMRT3', 'PPP4R4', 'MARCO', 'GPX2', 'LBP', 'IL20', 'COL23A1', 'INHA', 'FOXD1', 'NOS2', 'PKNOX2', 'BTLA', 'TNFRSF17', 'CRISP3', 'ADH1C', 'KLHL14', 'AVPR2', 'CXCL2', 'GLOD5', 'MYBPC1', 'PARP15', 'GPLD1', 'PFN1P2', 'GPR55', 'CST9', 'SLCO4C1', 'STEAP1B', 'BCL2L14', 'SLC23A1', 'C2ORF40', 'DHRS4L1', 'SCN3A', 'AMH', 'CXCR2P1', 'ZNF98', 'VAT1L', 'ULBP2', 'VSIG2', 'ZNF454', 'RNF212', 'TPSG1', 'VGLL1', 'CYSLTR2', 'HAP1', 'P2RX1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'TMEM105', 'ORM1', 'FAM178B', 'DKK1', 'ZNF488', 'IL23A', 'DPY19L2P2', 'AMBP', 'PRKG2', 'CXCL1', 'SIGLEC17P', 'CRYM', 'SUCNR1', 'DEPDC4', 'SPDYE1', 'FABP7', 'LRRC2', 'GPBAR1', 'CTCFL', 'BRINP1', 'BDKRB1', 'LRGUK', 'XIRP1', 'ADAMTS18', 'VWDE', 'LINC00930', 'FUT6', 'RERGL', 'TENM1', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'KIAA0319', 'NUGGC', 'CECR2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'PKD1L1', 'SSUH2', 'WSCD2', 'CBLN2', 'ECEL1', 'SPESP1', 'SEC14L5', 'ABHD11.AS1', 'FSCN2', 'DMRT2', 'CCL17', 'ZNF732', 'FAM162B', 'PIANP', 'HOXD4', 'GNB3', 'TMEM217', 'CTSG', 'GRIA3', 'RSPO1', 'RGS6', 'SERPINA6', 'ADAMTS19', 'IL1R2', 'MT1A', 'RNF175', 'ADAM32', 'COL2A1', 'CHRNB2', 'FLJ12825', 'POM121L9P', 'PFKFB1', 'RASL10A', 'HECTD2.AS1', 'PRSS21', 'DIRC3', 'LRRC16B', 'CYP46A1', 'SMIM5', 'FOXC2', 'CAPN11', 'ZNF804A', 'IGF2BP3', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'CYSRT1', 'VIPR2', 'GPR87', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'SLC13A2', 'XKR9', 'CA9', 'HTR7', 'HOGA1', 'EMX1', 'WIPF3', 'CEP83.AS1', 'ZSCAN1', 'ZBTB16', 'CITED1', 'OTUD7A', 'TMEM40', 'CYP26A1', 'TMSB15A', 'WFDC3', 'MAPT.IT1', 'CDHR1', 'ANKK1', 'GZMM', 'ROPN1L', 'PVALB', 'FIRRE', 'M1AP', 'MYO3B', 'INE2', 'CRTAC1', 'MRAP2', 'IGSF22', 'RFX8', 'RBM12B.AS1', 'SPAG17', 'TTC23L', 'HEATR4', 'PYGM', 'MROH7', 'PCDHA12', 'CFAP61', 'BTC', 'KCNT2', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'B3GAT1', 'OPCML', 'SRSF12', 'NWD1', 'LRRC4B', 'CIDEC', 'CCBE1', 'ADGRF1', 'CLEC4E', 'MIA', 'LINC00173', 'TMEM59L', 'HPDL', 'TSPAN8', 'RNF182', 'FRMPD1', 'GALNT13', 'SMC1B', 'KCNA6', 'KLK6', 'LSAMP', 'LOC613037', 'ABCC6P2', 'FASLG', 'IL11', 'NLRP7', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'COL28A1', 'C15ORF56', 'FAM83A', 'PSORS1C1', 'ANO5', 'SLC16A11', 'PTCHD1', 'SLC6A14', 'SLC24A5', 'C9ORF47', 'ADGRG2', 'TMPRSS4', 'TUSC5', 'LINC00908', 'RUFY4', 'CYP4F12', 'INTS4P2', 'PIK3C2G', 'IGSF1', 'KCNQ3', 'LOC100133669', 'VENTX', 'MYOM2', 'FAM157A', 'NBPF4', 'EBF2', 'MAG', 'DSCAML1', 'PCDHA5', 'PTPRN', 'KLK7', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'SFTPA2', 'CNTN2', 'ZBTB20', 'FAM19A2', 'NKX3.2', 'DLX5', 'PLAC1', 'CCNI2', 'BRE.AS1', 'OR2W3', 'SLC6A17', 'RYR3', 'GHRLOS', 'ABCC2', 'PTPRR', 'ABCD2', 'TFAP2E', 'CD160', 'GRIA2', 'CD1A', 'DEFB1', 'CCDC144A', 'RGS9', 'DLK2', 'CACNA1I', 'GGT3P', 'CDKL2', 'MYO16', 'PWAR5', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'CABP4', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CHRNA10', 'TCEAL2', 'FKBP1AP1', 'UNC13A', 'AGBL4', 'SLC39A2', 'XCL2', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'ZNF727', 'LINC00202.1', 'KCNH3', 'ARL9', 'TM6SF2', 'MAK', 'SNORD116.4', 'TCN1', 'P2RY12', 'GRID2IP', 'MPL', 'HRCT1', 'PCBP3', 'SYCE3', 'TCTEX1D1', 'ELOVL3', 'GPM6A', 'CD70', 'NOX5', 'SLC46A2', 'SYCE2', 'GRIN2A', 'ARMC3', 'JAKMIP1', 'PGLYRP2', 'TIGD4', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'KLF3.AS1', 'SOSTDC1', 'ASIC3', 'LONRF3', 'LRRC43', 'AGAP7P', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'LOC400927', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'ACHE', 'CEACAM7', 'RIMS2', 'OLFM4', 'CTAGE11P', 'TMEM145', 'CD40LG', 'C6ORF52', 'HRC', 'BEGAIN', 'VN1R1', 'GPR82', 'CXADRP3', 'PAH', 'CHODL', 'TTBK1', 'LOC285593', 'MLLT4.AS1', 'CHST9', 'TTYH1', 'HIST1H2BH', 'APOBEC3A', 'GABRB3', 'ADGRL3', 'SLC25A34', 'BRSK2', 'TRH', 'MAPK4', 'CAMK4', 'DGCR5', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'EPYC', 'GBP6', 'MUC15', 'GPR63', 'CAPSL', 'SLC35F3', 'ANKLE1', 'IL17D', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'TNFSF11', 'RMRP', 'FAM201A', 'HAMP', 'MYO15A', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'PTX3', 'DCLK3', 'RHCE', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'ROPN1B', 'RUNDC3A', 'LOC100132215', 'CYP2E1', 'C1QL3', 'UCKL1.AS1', 'PNMA6A', 'LINC00961', 'CYTL1', 'FOLR1', 'RRN3P1', 'XCL1', 'SIGLEC6', 'LINC00689', 'RRN3P2', 'HBA1', 'ATP13A4', 'THSD7B', 'SLC2A14', 'ADRA2B', 'MT1L', 'ZMAT4', 'TMEM150B', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 4.036908692228344e-15 NRMSE: 6.312108032567187e-16 MAPE: 7.303204884600224e-12 Pearson Correlation: 0.025579920593008905 Spearman Correlation: 0.06240854550775535 Coefficient of Determination: -2.1558732970665746 RMSE: 0.8823167161274872 NRMSE: 0.29079055966234496 MAPE: 504.9271338856097 Predictor: ElasticNet Pearson Correlation: 0.8469525503617161 Spearman Correlation: 0.7974734022355667 Coefficient of Determination: 0.6425981482864285 RMSE: 0.3745256239913508 NRMSE: 0.05856080431418197 MAPE: 331.1999032465007 Pearson Correlation: 0.11215159690872795 Spearman Correlation: 0.12145156570090725 Coefficient of Determination: -0.3069402439827358 RMSE: 0.5677963463045173 NRMSE: 0.18713214234543446 MAPE: 280.6069838155501 Predictor: RandomForests Pearson Correlation: 0.524342618251774 Spearman Correlation: 0.5066631960341178 Coefficient of Determination: 0.17271031331141162 RMSE: 0.5698124607963886 NRMSE: 0.08909584251370316 MAPE: 408.9680483980852 Pearson Correlation: 0.1262123047162386 Spearman Correlation: 0.1864062042727539 Coefficient of Determination: -0.005724965466336052 RMSE: 0.4980860097472167 NRMSE: 0.16415727695841298 MAPE: 169.7537035938659 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'LINC01119', 'IQUB', 'NKPD1', 'LINC01341', 'SOX8', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'PPP1R3G', 'C19ORF18', 'FXYD1', 'RNF138P1', 'CCIN', 'MYCBPAP', 'ETV2', 'XPNPEP2', 'TEKT3', 'STKLD1', 'SLC30A8', 'UGT8', 'SLC28A3', 'CCR8', 'METTL7B', 'HEPACAM2', 'UBE2Q2P1', 'TEX14', 'PLP1', 'SLC25A18', 'JPH4', 'IDI2.AS1', 'CASQ1', 'S100A3', 'LINC00482', 'LRIT3', 'GLIS1', 'SGK2', 'CCDC36', 'NR1I3', 'ALOXE3', 'ZNF843', 'CACNG1', 'MS4A15', 'WNT2B', 'PBX4', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'LGALS2', 'PYGO1', 'TMEM92', 'FUT9', 'ADAMTS8', 'BCHE', 'AOC2', 'GJB1', 'C9ORF43', 'CCDC151', 'FCRL6', 'PNCK', 'PITX2', 'TNNI3K', 'FAM189A1', 'DQX1', 'LPAR3', 'CKMT2', 'ABCA17P', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'NLRP12', 'C1ORF101', 'CLDN9', 'IYD', 'ZNF835', 'SLC6A20', 'OTOA', 'CA3', 'SPIB', 'FAM95B1', 'FAM90A1', 'C1ORF95', 'C2CD4A', 'RYR2', 'PCDH9', 'CCDC158', 'CLEC3A', 'SCN2B', 'CLECL1', 'PCSK1N', 'ULBP3', 'SVOPL', 'LINC01550', 'GSDMC', 'ARC', 'TAS1R3', 'CCDC65', 'IL20RB', 'DDX11L2', 'VSIG1', 'AURKC', 'TTC16', 'ZCCHC18', 'PDE1C', 'ALDH8A1', 'COLCA2', 'PCYT1B', 'MYOZ1', 'BPIFB2', 'KNDC1', 'B3GALT5.AS1', 'DUOXA1', 'CRYGS', 'GSTM1', 'PPP1R36', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.8441961445526212 Spearman Correlation: 0.8062893803806384 Coefficient of Determination: 0.7126671304775102 RMSE: 0.10592641385944983 NRMSE: 0.06852264361549547 MAPE: 317.1748578374848 Pearson Correlation: 0.06636025559994134 Spearman Correlation: 0.061389207625164685 Coefficient of Determination: -2.492236592615603 RMSE: 0.3452234044491522 NRMSE: 0.34549980429258637 MAPE: 619.0985894093243 Predictor: ElasticNet Pearson Correlation: 0.4768726538590419 Spearman Correlation: 0.4669740034008014 Coefficient of Determination: 0.1650388334373305 RMSE: 0.18056964867690284 NRMSE: 0.11680853937413663 MAPE: 189.87578525423098 Pearson Correlation: 0.32482137511192755 Spearman Correlation: 0.3329435334890944 Coefficient of Determination: 0.08552914715626803 RMSE: 0.17665801066225423 NRMSE: 0.1767994502224322 MAPE: 128.95221264619985 Predictor: RandomForests Pearson Correlation: 0.5009107961762462 Spearman Correlation: 0.48815624248867384 Coefficient of Determination: 0.12848748052908332 RMSE: 0.1844796345241979 NRMSE: 0.1193378666400566 MAPE: 153.51780208535118 Pearson Correlation: 0.33373587802386034 Spearman Correlation: 0.34736165662114477 Coefficient of Determination: 0.07361626204311844 RMSE: 0.17780495644391983 NRMSE: 0.17794731429535615 MAPE: 112.72143791548712 Protein: CDKN2A x_train_column_count: 615 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'LINC01119', 'IQUB', 'NKPD1', 'LINC01341', 'SOX8', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'PPP1R3G', 'C19ORF18', 'FXYD1', 'RNF138P1', 'CCIN', 'MYCBPAP', 'ETV2', 'XPNPEP2', 'TEKT3', 'STKLD1', 'SLC30A8', 'UGT8', 'SLC28A3', 'CCR8', 'METTL7B', 'HEPACAM2', 'UBE2Q2P1', 'TEX14', 'PLP1', 'SLC25A18', 'JPH4', 'IDI2.AS1', 'CASQ1', 'S100A3', 'LINC00482', 'LRIT3', 'GLIS1', 'SGK2', 'CCDC36', 'NR1I3', 'ALOXE3', 'ZNF843', 'CACNG1', 'MS4A15', 'WNT2B', 'PBX4', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'LGALS2', 'PYGO1', 'TMEM92', 'FUT9', 'ADAMTS8', 'BCHE', 'AOC2', 'GJB1', 'C9ORF43', 'CCDC151', 'FCRL6', 'PNCK', 'PITX2', 'TNNI3K', 'FAM189A1', 'DQX1', 'LPAR3', 'CKMT2', 'ABCA17P', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'NLRP12', 'C1ORF101', 'CLDN9', 'IYD', 'ZNF835', 'SLC6A20', 'OTOA', 'CA3', 'SPIB', 'FAM95B1', 'FAM90A1', 'C1ORF95', 'C2CD4A', 'RYR2', 'PCDH9', 'CCDC158', 'CLEC3A', 'SCN2B', 'CLECL1', 'PCSK1N', 'ULBP3', 'SVOPL', 'LINC01550', 'GSDMC', 'ARC', 'TAS1R3', 'CCDC65', 'IL20RB', 'DDX11L2', 'VSIG1', 'AURKC', 'TTC16', 'ZCCHC18', 'PDE1C', 'ALDH8A1', 'COLCA2', 'PCYT1B', 'MYOZ1', 'BPIFB2', 'KNDC1', 'B3GALT5.AS1', 'DUOXA1', 'CRYGS', 'GSTM1', 'PPP1R36', 'KLHL4', 'LOC148709', 'LOC441455', 'CPEB1', 'OR7E91P', 'IL22RA1', 'HOXD3', 'TARP', 'FAM57B', 'LOC90768', 'CAMP', 'JPH3', 'LUZP2', 'FUT7', 'IL12RB2', 'PLA2G5', 'RIMS1', 'FLJ37201', 'LBX2', 'SCARA5', 'RELN', 'HOXB13', 'CD177', 'IGSF5', 'TUBB8', 'SLC22A18AS', 'HIST1H2BN', 'ZBED3.AS1', 'GPR18', 'ASTN1', 'ZC3H12D', 'KCNE1', 'MNX1', 'TCHH', 'CIDEA', 'ONECUT2', 'GAL', 'KCNE2', 'SP5', 'WDR72', 'BTBD8', 'CHRNA6', 'FAM135B', 'IRX4', 'C10ORF128', 'SLC16A10', 'RSPH4A', 'MGC16142', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'CCDC7', 'MGAT5B', 'YPEL4', 'GBP1P1', 'DCSTAMP', 'CELF5', 'CXXC4', 'GRIN2C', 'GPR3', 'SKIDA1', 'OBP2B', 'CXCR5', 'SLC35F1', 'PYDC1', 'SLC30A2', 'HOXA11', 'NIPAL1', 'ATP13A5', 'CCDC153', 'FOXJ1', 'STRC', 'SRL', 'WT1', 'PCSK9', 'PCAT18', 'TNFRSF9', 'LRP1B', 'RPGRIP1', 'INSM1', 'GPR174', 'CNNM1', 'PCK1', 'NOXO1', 'SLC18A2', 'C17ORF104', 'SLC25A53', 'FOXD4', 'DMRT3', 'PPP4R4', 'MARCO', 'GPX2', 'LBP', 'IL20', 'COL23A1', 'INHA', 'FOXD1', 'NOS2', 'PKNOX2', 'BTLA', 'TNFRSF17', 'CRISP3', 'ADH1C', 'KLHL14', 'AVPR2', 'CXCL2', 'GLOD5', 'MYBPC1', 'PARP15', 'GPLD1', 'PFN1P2', 'GPR55', 'CST9', 'SLCO4C1', 'STEAP1B', 'BCL2L14', 'SLC23A1', 'C2ORF40', 'DHRS4L1', 'SCN3A', 'AMH', 'CXCR2P1', 'ZNF98', 'VAT1L', 'ULBP2', 'VSIG2', 'ZNF454', 'RNF212', 'TPSG1', 'VGLL1', 'CYSLTR2', 'HAP1', 'P2RX1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'TMEM105', 'ORM1', 'FAM178B', 'DKK1', 'ZNF488', 'IL23A', 'DPY19L2P2', 'AMBP', 'PRKG2', 'CXCL1', 'SIGLEC17P', 'CRYM', 'SUCNR1', 'DEPDC4', 'SPDYE1', 'FABP7', 'LRRC2', 'GPBAR1', 'CTCFL', 'BRINP1', 'BDKRB1', 'LRGUK', 'XIRP1', 'ADAMTS18', 'VWDE', 'LINC00930', 'FUT6', 'RERGL', 'TENM1', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'KIAA0319', 'NUGGC', 'CECR2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'PKD1L1', 'SSUH2', 'WSCD2', 'CBLN2', 'ECEL1', 'SPESP1', 'SEC14L5', 'ABHD11.AS1', 'FSCN2', 'DMRT2', 'CCL17', 'ZNF732', 'FAM162B', 'PIANP', 'HOXD4', 'GNB3', 'TMEM217', 'CTSG', 'GRIA3', 'RSPO1', 'RGS6', 'SERPINA6', 'ADAMTS19', 'IL1R2', 'MT1A', 'RNF175', 'ADAM32', 'COL2A1', 'CHRNB2', 'FLJ12825', 'POM121L9P', 'PFKFB1', 'RASL10A', 'HECTD2.AS1', 'PRSS21', 'DIRC3', 'LRRC16B', 'CYP46A1', 'SMIM5', 'FOXC2', 'CAPN11', 'ZNF804A', 'IGF2BP3', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'CYSRT1', 'VIPR2', 'GPR87', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'SLC13A2', 'XKR9', 'CA9', 'HTR7', 'HOGA1', 'EMX1', 'WIPF3', 'CEP83.AS1', 'ZSCAN1', 'ZBTB16', 'CITED1', 'OTUD7A', 'TMEM40', 'CYP26A1', 'TMSB15A', 'WFDC3', 'MAPT.IT1', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 4.2647290706174875e-15 NRMSE: 9.641073969972843e-16 MAPE: 3.2817919099874694e-12 Pearson Correlation: 0.20761524116024582 Spearman Correlation: 0.18261633011413525 Coefficient of Determination: -2.0216571278438633 RMSE: 1.298268867748059 NRMSE: 0.35059920814152284 MAPE: 2239.9721687164765 Predictor: ElasticNet Pearson Correlation: 0.8069706841644965 Spearman Correlation: 0.788500827552535 Coefficient of Determination: 0.5914613927634004 RMSE: 0.4108041385960095 NRMSE: 0.09286857434068259 MAPE: 167.76412603639073 Pearson Correlation: 0.5175149575363702 Spearman Correlation: 0.45072675836503756 Coefficient of Determination: 0.25328014289719025 RMSE: 0.6453880232820103 NRMSE: 0.17428788098352965 MAPE: 1277.2135147028441 Predictor: RandomForests Pearson Correlation: 0.5420547662999063 Spearman Correlation: 0.5031804973126458 Coefficient of Determination: 0.1954549701520769 RMSE: 0.576492200954563 NRMSE: 0.13032490131221044 MAPE: 181.04631578294257 Pearson Correlation: 0.5153730144546627 Spearman Correlation: 0.4495707735830651 Coefficient of Determination: 0.15396195108858957 RMSE: 0.6869687776537536 NRMSE: 0.18551681816196428 MAPE: 571.0861137486792 Protein: TP53 x_train_column_count: 1002 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'LINC01119', 'IQUB', 'NKPD1', 'LINC01341', 'SOX8', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'PPP1R3G', 'C19ORF18', 'FXYD1', 'RNF138P1', 'CCIN', 'MYCBPAP', 'ETV2', 'XPNPEP2', 'TEKT3', 'STKLD1', 'SLC30A8', 'UGT8', 'SLC28A3', 'CCR8', 'METTL7B', 'HEPACAM2', 'UBE2Q2P1', 'TEX14', 'PLP1', 'SLC25A18', 'JPH4', 'IDI2.AS1', 'CASQ1', 'S100A3', 'LINC00482', 'LRIT3', 'GLIS1', 'SGK2', 'CCDC36', 'NR1I3', 'ALOXE3', 'ZNF843', 'CACNG1', 'MS4A15', 'WNT2B', 'PBX4', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'LGALS2', 'PYGO1', 'TMEM92', 'FUT9', 'ADAMTS8', 'BCHE', 'AOC2', 'GJB1', 'C9ORF43', 'CCDC151', 'FCRL6', 'PNCK', 'PITX2', 'TNNI3K', 'FAM189A1', 'DQX1', 'LPAR3', 'CKMT2', 'ABCA17P', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'NLRP12', 'C1ORF101', 'CLDN9', 'IYD', 'ZNF835', 'SLC6A20', 'OTOA', 'CA3', 'SPIB', 'FAM95B1', 'FAM90A1', 'C1ORF95', 'C2CD4A', 'RYR2', 'PCDH9', 'CCDC158', 'CLEC3A', 'SCN2B', 'CLECL1', 'PCSK1N', 'ULBP3', 'SVOPL', 'LINC01550', 'GSDMC', 'ARC', 'TAS1R3', 'CCDC65', 'IL20RB', 'DDX11L2', 'VSIG1', 'AURKC', 'TTC16', 'ZCCHC18', 'PDE1C', 'ALDH8A1', 'COLCA2', 'PCYT1B', 'MYOZ1', 'BPIFB2', 'KNDC1', 'B3GALT5.AS1', 'DUOXA1', 'CRYGS', 'GSTM1', 'PPP1R36', 'KLHL4', 'LOC148709', 'LOC441455', 'CPEB1', 'OR7E91P', 'IL22RA1', 'HOXD3', 'TARP', 'FAM57B', 'LOC90768', 'CAMP', 'JPH3', 'LUZP2', 'FUT7', 'IL12RB2', 'PLA2G5', 'RIMS1', 'FLJ37201', 'LBX2', 'SCARA5', 'RELN', 'HOXB13', 'CD177', 'IGSF5', 'TUBB8', 'SLC22A18AS', 'HIST1H2BN', 'ZBED3.AS1', 'GPR18', 'ASTN1', 'ZC3H12D', 'KCNE1', 'MNX1', 'TCHH', 'CIDEA', 'ONECUT2', 'GAL', 'KCNE2', 'SP5', 'WDR72', 'BTBD8', 'CHRNA6', 'FAM135B', 'IRX4', 'C10ORF128', 'SLC16A10', 'RSPH4A', 'MGC16142', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'CCDC7', 'MGAT5B', 'YPEL4', 'GBP1P1', 'DCSTAMP', 'CELF5', 'CXXC4', 'GRIN2C', 'GPR3', 'SKIDA1', 'OBP2B', 'CXCR5', 'SLC35F1', 'PYDC1', 'SLC30A2', 'HOXA11', 'NIPAL1', 'ATP13A5', 'CCDC153', 'FOXJ1', 'STRC', 'SRL', 'WT1', 'PCSK9', 'PCAT18', 'TNFRSF9', 'LRP1B', 'RPGRIP1', 'INSM1', 'GPR174', 'CNNM1', 'PCK1', 'NOXO1', 'SLC18A2', 'C17ORF104', 'SLC25A53', 'FOXD4', 'DMRT3', 'PPP4R4', 'MARCO', 'GPX2', 'LBP', 'IL20', 'COL23A1', 'INHA', 'FOXD1', 'NOS2', 'PKNOX2', 'BTLA', 'TNFRSF17', 'CRISP3', 'ADH1C', 'KLHL14', 'AVPR2', 'CXCL2', 'GLOD5', 'MYBPC1', 'PARP15', 'GPLD1', 'PFN1P2', 'GPR55', 'CST9', 'SLCO4C1', 'STEAP1B', 'BCL2L14', 'SLC23A1', 'C2ORF40', 'DHRS4L1', 'SCN3A', 'AMH', 'CXCR2P1', 'ZNF98', 'VAT1L', 'ULBP2', 'VSIG2', 'ZNF454', 'RNF212', 'TPSG1', 'VGLL1', 'CYSLTR2', 'HAP1', 'P2RX1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'TMEM105', 'ORM1', 'FAM178B', 'DKK1', 'ZNF488', 'IL23A', 'DPY19L2P2', 'AMBP', 'PRKG2', 'CXCL1', 'SIGLEC17P', 'CRYM', 'SUCNR1', 'DEPDC4', 'SPDYE1', 'FABP7', 'LRRC2', 'GPBAR1', 'CTCFL', 'BRINP1', 'BDKRB1', 'LRGUK', 'XIRP1', 'ADAMTS18', 'VWDE', 'LINC00930', 'FUT6', 'RERGL', 'TENM1', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'KIAA0319', 'NUGGC', 'CECR2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'PKD1L1', 'SSUH2', 'WSCD2', 'CBLN2', 'ECEL1', 'SPESP1', 'SEC14L5', 'ABHD11.AS1', 'FSCN2', 'DMRT2', 'CCL17', 'ZNF732', 'FAM162B', 'PIANP', 'HOXD4', 'GNB3', 'TMEM217', 'CTSG', 'GRIA3', 'RSPO1', 'RGS6', 'SERPINA6', 'ADAMTS19', 'IL1R2', 'MT1A', 'RNF175', 'ADAM32', 'COL2A1', 'CHRNB2', 'FLJ12825', 'POM121L9P', 'PFKFB1', 'RASL10A', 'HECTD2.AS1', 'PRSS21', 'DIRC3', 'LRRC16B', 'CYP46A1', 'SMIM5', 'FOXC2', 'CAPN11', 'ZNF804A', 'IGF2BP3', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'CYSRT1', 'VIPR2', 'GPR87', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'SLC13A2', 'XKR9', 'CA9', 'HTR7', 'HOGA1', 'EMX1', 'WIPF3', 'CEP83.AS1', 'ZSCAN1', 'ZBTB16', 'CITED1', 'OTUD7A', 'TMEM40', 'CYP26A1', 'TMSB15A', 'WFDC3', 'MAPT.IT1', 'CDHR1', 'ANKK1', 'GZMM', 'ROPN1L', 'PVALB', 'FIRRE', 'M1AP', 'MYO3B', 'INE2', 'CRTAC1', 'MRAP2', 'IGSF22', 'RFX8', 'RBM12B.AS1', 'SPAG17', 'TTC23L', 'HEATR4', 'PYGM', 'MROH7', 'PCDHA12', 'CFAP61', 'BTC', 'KCNT2', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'B3GAT1', 'OPCML', 'SRSF12', 'NWD1', 'LRRC4B', 'CIDEC', 'CCBE1', 'ADGRF1', 'CLEC4E', 'MIA', 'LINC00173', 'TMEM59L', 'HPDL', 'TSPAN8', 'RNF182', 'FRMPD1', 'GALNT13', 'SMC1B', 'KCNA6', 'KLK6', 'LSAMP', 'LOC613037', 'ABCC6P2', 'FASLG', 'IL11', 'NLRP7', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'COL28A1', 'C15ORF56', 'FAM83A', 'PSORS1C1', 'ANO5', 'SLC16A11', 'PTCHD1', 'SLC6A14', 'SLC24A5', 'C9ORF47', 'ADGRG2', 'TMPRSS4', 'TUSC5', 'LINC00908', 'RUFY4', 'CYP4F12', 'INTS4P2', 'PIK3C2G', 'IGSF1', 'KCNQ3', 'LOC100133669', 'VENTX', 'MYOM2', 'FAM157A', 'NBPF4', 'EBF2', 'MAG', 'DSCAML1', 'PCDHA5', 'PTPRN', 'KLK7', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'SFTPA2', 'CNTN2', 'ZBTB20', 'FAM19A2', 'NKX3.2', 'DLX5', 'PLAC1', 'CCNI2', 'BRE.AS1', 'OR2W3', 'SLC6A17', 'RYR3', 'GHRLOS', 'ABCC2', 'PTPRR', 'ABCD2', 'TFAP2E', 'CD160', 'GRIA2', 'CD1A', 'DEFB1', 'CCDC144A', 'RGS9', 'DLK2', 'CACNA1I', 'GGT3P', 'CDKL2', 'MYO16', 'PWAR5', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'CABP4', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CHRNA10', 'TCEAL2', 'FKBP1AP1', 'UNC13A', 'AGBL4', 'SLC39A2', 'XCL2', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'ZNF727', 'LINC00202.1', 'KCNH3', 'ARL9', 'TM6SF2', 'MAK', 'SNORD116.4', 'TCN1', 'P2RY12', 'GRID2IP', 'MPL', 'HRCT1', 'PCBP3', 'SYCE3', 'TCTEX1D1', 'ELOVL3', 'GPM6A', 'CD70', 'NOX5', 'SLC46A2', 'SYCE2', 'GRIN2A', 'ARMC3', 'JAKMIP1', 'PGLYRP2', 'TIGD4', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'KLF3.AS1', 'SOSTDC1', 'ASIC3', 'LONRF3', 'LRRC43', 'AGAP7P', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'LOC400927', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'ACHE', 'CEACAM7', 'RIMS2', 'OLFM4', 'CTAGE11P', 'TMEM145', 'CD40LG', 'C6ORF52', 'HRC', 'BEGAIN', 'VN1R1', 'GPR82', 'CXADRP3', 'PAH', 'CHODL', 'TTBK1', 'LOC285593', 'MLLT4.AS1', 'CHST9', 'TTYH1', 'HIST1H2BH', 'APOBEC3A', 'GABRB3', 'ADGRL3', 'SLC25A34', 'BRSK2', 'TRH', 'MAPK4', 'CAMK4', 'DGCR5', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'EPYC', 'GBP6', 'MUC15', 'GPR63', 'CAPSL', 'SLC35F3', 'ANKLE1', 'IL17D', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'TNFSF11', 'RMRP', 'FAM201A', 'HAMP', 'MYO15A', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'PTX3', 'DCLK3', 'RHCE', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'ROPN1B', 'RUNDC3A', 'LOC100132215', 'CYP2E1', 'C1QL3', 'UCKL1.AS1', 'PNMA6A', 'LINC00961', 'CYTL1', 'FOLR1', 'RRN3P1', 'XCL1', 'SIGLEC6', 'LINC00689', 'RRN3P2', 'HBA1', 'ATP13A4', 'THSD7B', 'SLC2A14', 'ADRA2B', 'MT1L', 'ZMAT4', 'TMEM150B', 'IL1RL1', 'KISS1R', 'CCR10', 'KIF19', 'IL24', 'GLI1', 'GPR173', 'ARRDC3.AS1', 'DPEP1', 'LIN7A', 'TTLL9', 'PRRT4', 'NIPAL4', 'KIAA1210', 'GPR135', 'WBP2NL', 'A2ML1', 'RHBG', 'B3GALT5', 'PCDHB18P', 'GNMT', 'RRAD', 'CBLN1', 'FIGF', 'DPF3', 'LOC90246', 'OXGR1', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'MAP7D2', 'CACNA2D3', 'DPY19L2P4', 'MS4A8', 'SLC5A8', 'HIST1H1D', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PCDH20', 'GABRB2', 'DNAH11', 'TIFAB', 'PON3', 'KLK8', 'FOXN1', 'PHKG1', 'WFIKKN1', 'MASP2', 'CD19', 'GPR171', 'WNT10A', 'FREM2', 'LINC00669', 'ANK1', 'DCST2', 'C19ORF45', 'CRB2', 'CLCA2', 'KCNB1', 'SLC26A3', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'LINC01465', 'LINC00685', 'TYMSOS', 'RASAL1', 'CD1E', 'ANO2', 'RIC3', 'COLCA1', 'CST2', 'HNRNPCL3', 'NEURL3', 'LOC646999', 'MED12L', 'TTC41P', 'PCDHGC5', 'EYA1', 'STXBP6', 'RAB3B', 'CLPSL1', 'MYEOV', 'NRXN1', 'FAM182B', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'TDRD9', 'AJAP1', 'ZNF676', 'CR2', 'CLDN14', 'CXCR2', 'LPAR4', 'KIF4B', 'PATL2', 'FNDC8', 'CLEC4F', 'MSLN', 'KCNRG', 'MKX', 'ABHD1', 'C9ORF117', 'PDCD1', 'MAGEL2', 'NDP', 'VIT', 'HAPLN1', 'SEZ6L', 'DMRTC1B', 'POU3F1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.1789840570009644e-15 NRMSE: 5.236683626534402e-16 MAPE: 3.916700301534307e-12 Pearson Correlation: 0.19604119209560847 Spearman Correlation: 0.20419959028387477 Coefficient of Determination: -0.9856078295623765 RMSE: 0.5927271439972583 NRMSE: 0.21314220000620604 MAPE: 1248.193857150084 Predictor: ElasticNet Pearson Correlation: 0.7973572073827991 Spearman Correlation: 0.7314271834264533 Coefficient of Determination: 0.5771850254814479 RMSE: 0.29444241299096086 NRMSE: 0.07076241600359551 MAPE: 667.5094051156225 Pearson Correlation: 0.4881651207322523 Spearman Correlation: 0.49733684518583554 Coefficient of Determination: 0.2362600943164328 RMSE: 0.36760450035573455 NRMSE: 0.13218903964750064 MAPE: 556.0436389408072 Predictor: RandomForests Pearson Correlation: 0.5029915829893747 Spearman Correlation: 0.5325551687321626 Coefficient of Determination: 0.22476513012888932 RMSE: 0.3986959624622658 NRMSE: 0.09581734257684832 MAPE: 596.5086028446158 Pearson Correlation: 0.5012043295190987 Spearman Correlation: 0.49536630572627066 Coefficient of Determination: 0.2330521507101344 RMSE: 0.3683757176139241 NRMSE: 0.1324663661454652 MAPE: 811.1548290279641 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'LINC01119', 'IQUB', 'NKPD1', 'LINC01341', 'SOX8', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'PPP1R3G', 'C19ORF18', 'FXYD1', 'RNF138P1', 'CCIN', 'MYCBPAP', 'ETV2', 'XPNPEP2', 'TEKT3', 'STKLD1', 'SLC30A8', 'UGT8', 'SLC28A3', 'CCR8', 'METTL7B', 'HEPACAM2', 'UBE2Q2P1', 'TEX14', 'PLP1', 'SLC25A18', 'JPH4', 'IDI2.AS1', 'CASQ1', 'S100A3', 'LINC00482', 'LRIT3', 'GLIS1', 'SGK2', 'CCDC36', 'NR1I3', 'ALOXE3', 'ZNF843', 'CACNG1', 'MS4A15', 'WNT2B', 'PBX4', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'LGALS2', 'PYGO1', 'TMEM92', 'FUT9', 'ADAMTS8', 'BCHE', 'AOC2', 'GJB1', 'C9ORF43', 'CCDC151', 'FCRL6', 'PNCK', 'PITX2', 'TNNI3K', 'FAM189A1', 'DQX1', 'LPAR3', 'CKMT2', 'ABCA17P', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'NLRP12', 'C1ORF101', 'CLDN9', 'IYD', 'ZNF835', 'SLC6A20', 'OTOA', 'CA3', 'SPIB', 'FAM95B1', 'FAM90A1', 'C1ORF95', 'C2CD4A', 'RYR2', 'PCDH9', 'CCDC158', 'CLEC3A', 'SCN2B', 'CLECL1', 'PCSK1N', 'ULBP3', 'SVOPL', 'LINC01550', 'GSDMC', 'ARC', 'TAS1R3', 'CCDC65', 'IL20RB', 'DDX11L2', 'VSIG1', 'AURKC', 'TTC16', 'ZCCHC18', 'PDE1C', 'ALDH8A1', 'COLCA2', 'PCYT1B', 'MYOZ1', 'BPIFB2', 'KNDC1', 'B3GALT5.AS1', 'DUOXA1', 'CRYGS', 'GSTM1', 'PPP1R36', 'KLHL4', 'LOC148709', 'LOC441455', 'CPEB1', 'OR7E91P', 'IL22RA1', 'HOXD3', 'TARP', 'FAM57B', 'LOC90768', 'CAMP', 'JPH3', 'LUZP2', 'FUT7', 'IL12RB2', 'PLA2G5', 'RIMS1', 'FLJ37201', 'LBX2', 'SCARA5', 'RELN', 'HOXB13', 'CD177', 'IGSF5', 'TUBB8', 'SLC22A18AS', 'HIST1H2BN', 'ZBED3.AS1', 'GPR18', 'ASTN1', 'ZC3H12D', 'KCNE1', 'MNX1', 'TCHH', 'CIDEA', 'ONECUT2', 'GAL', 'KCNE2', 'SP5', 'WDR72', 'BTBD8', 'CHRNA6', 'FAM135B', 'IRX4', 'C10ORF128', 'SLC16A10', 'RSPH4A', 'MGC16142', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'CCDC7', 'MGAT5B', 'YPEL4', 'GBP1P1', 'DCSTAMP', 'CELF5', 'CXXC4', 'GRIN2C', 'GPR3', 'SKIDA1', 'OBP2B', 'CXCR5', 'SLC35F1', 'PYDC1', 'SLC30A2', 'HOXA11', 'NIPAL1', 'ATP13A5', 'CCDC153', 'FOXJ1', 'STRC', 'SRL', 'WT1', 'PCSK9', 'PCAT18', 'TNFRSF9', 'LRP1B', 'RPGRIP1', 'INSM1', 'GPR174', 'CNNM1', 'PCK1', 'NOXO1', 'SLC18A2', 'C17ORF104', 'SLC25A53', 'FOXD4', 'DMRT3', 'PPP4R4', 'MARCO', 'GPX2', 'LBP', 'IL20', 'COL23A1', 'INHA', 'FOXD1', 'NOS2', 'PKNOX2', 'BTLA', 'TNFRSF17', 'CRISP3', 'ADH1C', 'KLHL14', 'AVPR2', 'CXCL2', 'GLOD5', 'MYBPC1', 'PARP15', 'GPLD1', 'PFN1P2', 'GPR55', 'CST9', 'SLCO4C1', 'STEAP1B', 'BCL2L14', 'SLC23A1', 'C2ORF40', 'DHRS4L1', 'SCN3A', 'AMH', 'CXCR2P1', 'ZNF98', 'VAT1L', 'ULBP2', 'VSIG2', 'ZNF454', 'RNF212', 'TPSG1', 'VGLL1', 'CYSLTR2', 'HAP1', 'P2RX1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'TMEM105', 'ORM1', 'FAM178B', 'DKK1', 'ZNF488', 'IL23A', 'DPY19L2P2', 'AMBP', 'PRKG2', 'CXCL1', 'SIGLEC17P', 'CRYM', 'SUCNR1', 'DEPDC4', 'SPDYE1', 'FABP7', 'LRRC2', 'GPBAR1', 'CTCFL', 'BRINP1', 'BDKRB1', 'LRGUK', 'XIRP1', 'ADAMTS18', 'VWDE', 'LINC00930', 'FUT6', 'RERGL', 'TENM1', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'KIAA0319', 'NUGGC', 'CECR2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'PKD1L1', 'SSUH2', 'WSCD2', 'CBLN2', 'ECEL1', 'SPESP1', 'SEC14L5', 'ABHD11.AS1', 'FSCN2', 'DMRT2', 'CCL17', 'ZNF732', 'FAM162B', 'PIANP', 'HOXD4', 'GNB3', 'TMEM217', 'CTSG', 'GRIA3', 'RSPO1', 'RGS6', 'SERPINA6', 'ADAMTS19', 'IL1R2', 'MT1A', 'RNF175', 'ADAM32', 'COL2A1', 'CHRNB2', 'FLJ12825', 'POM121L9P', 'PFKFB1', 'RASL10A', 'HECTD2.AS1', 'PRSS21', 'DIRC3', 'LRRC16B', 'CYP46A1', 'SMIM5', 'FOXC2', 'CAPN11', 'ZNF804A', 'IGF2BP3', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'CYSRT1', 'VIPR2', 'GPR87', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'SLC13A2', 'XKR9', 'CA9', 'HTR7', 'HOGA1', 'EMX1', 'WIPF3', 'CEP83.AS1', 'ZSCAN1', 'ZBTB16', 'CITED1', 'OTUD7A', 'TMEM40', 'CYP26A1', 'TMSB15A', 'WFDC3', 'MAPT.IT1', 'CDHR1', 'ANKK1', 'GZMM', 'ROPN1L', 'PVALB', 'FIRRE', 'M1AP', 'MYO3B', 'INE2', 'CRTAC1', 'MRAP2', 'IGSF22', 'RFX8', 'RBM12B.AS1', 'SPAG17', 'TTC23L', 'HEATR4', 'PYGM', 'MROH7', 'PCDHA12', 'CFAP61', 'BTC', 'KCNT2', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'B3GAT1', 'OPCML', 'SRSF12', 'NWD1', 'LRRC4B', 'CIDEC', 'CCBE1', 'ADGRF1', 'CLEC4E', 'MIA', 'LINC00173', 'TMEM59L', 'HPDL', 'TSPAN8', 'RNF182', 'FRMPD1', 'GALNT13', 'SMC1B', 'KCNA6', 'KLK6', 'LSAMP', 'LOC613037', 'ABCC6P2', 'FASLG', 'IL11', 'NLRP7', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'COL28A1', 'C15ORF56', 'FAM83A', 'PSORS1C1', 'ANO5', 'SLC16A11', 'PTCHD1', 'SLC6A14', 'SLC24A5', 'C9ORF47', 'ADGRG2', 'TMPRSS4', 'TUSC5', 'LINC00908', 'RUFY4', 'CYP4F12', 'INTS4P2', 'PIK3C2G', 'IGSF1', 'KCNQ3', 'LOC100133669', 'VENTX', 'MYOM2', 'FAM157A', 'NBPF4', 'EBF2', 'MAG', 'DSCAML1', 'PCDHA5', 'PTPRN', 'KLK7', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'SFTPA2', 'CNTN2', 'ZBTB20', 'FAM19A2', 'NKX3.2', 'DLX5', 'PLAC1', 'CCNI2', 'BRE.AS1', 'OR2W3', 'SLC6A17', 'RYR3', 'GHRLOS', 'ABCC2', 'PTPRR', 'ABCD2', 'TFAP2E', 'CD160', 'GRIA2', 'CD1A', 'DEFB1', 'CCDC144A', 'RGS9', 'DLK2', 'CACNA1I', 'GGT3P', 'CDKL2', 'MYO16', 'PWAR5', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'CABP4', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CHRNA10', 'TCEAL2', 'FKBP1AP1', 'UNC13A', 'AGBL4', 'SLC39A2', 'XCL2', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'ZNF727', 'LINC00202.1', 'KCNH3', 'ARL9', 'TM6SF2', 'MAK', 'SNORD116.4', 'TCN1', 'P2RY12', 'GRID2IP', 'MPL', 'HRCT1', 'PCBP3', 'SYCE3', 'TCTEX1D1', 'ELOVL3', 'GPM6A', 'CD70', 'NOX5', 'SLC46A2', 'SYCE2', 'GRIN2A', 'ARMC3', 'JAKMIP1', 'PGLYRP2', 'TIGD4', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'KLF3.AS1', 'SOSTDC1', 'ASIC3', 'LONRF3', 'LRRC43', 'AGAP7P', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'LOC400927', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'ACHE', 'CEACAM7', 'RIMS2', 'OLFM4', 'CTAGE11P', 'TMEM145', 'CD40LG', 'C6ORF52', 'HRC', 'BEGAIN', 'VN1R1', 'GPR82', 'CXADRP3', 'PAH', 'CHODL', 'TTBK1', 'LOC285593', 'MLLT4.AS1', 'CHST9', 'TTYH1', 'HIST1H2BH', 'APOBEC3A', 'GABRB3', 'ADGRL3', 'SLC25A34', 'BRSK2', 'TRH', 'MAPK4', 'CAMK4', 'DGCR5', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'EPYC', 'GBP6', 'MUC15', 'GPR63', 'CAPSL', 'SLC35F3', 'ANKLE1', 'IL17D', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'TNFSF11', 'RMRP', 'FAM201A', 'HAMP', 'MYO15A', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'PTX3', 'DCLK3', 'RHCE', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'ROPN1B', 'RUNDC3A', 'LOC100132215', 'CYP2E1', 'C1QL3', 'UCKL1.AS1', 'PNMA6A', 'LINC00961', 'CYTL1', 'FOLR1', 'RRN3P1', 'XCL1', 'SIGLEC6', 'LINC00689', 'RRN3P2', 'HBA1', 'ATP13A4', 'THSD7B', 'SLC2A14', 'ADRA2B', 'MT1L', 'ZMAT4', 'TMEM150B', 'IL1RL1', 'KISS1R', 'CCR10', 'KIF19', 'IL24', 'GLI1', 'GPR173', 'ARRDC3.AS1', 'DPEP1', 'LIN7A', 'TTLL9', 'PRRT4', 'NIPAL4', 'KIAA1210', 'GPR135', 'WBP2NL', 'A2ML1', 'RHBG', 'B3GALT5', 'PCDHB18P', 'GNMT', 'RRAD', 'CBLN1', 'FIGF', 'DPF3', 'LOC90246', 'OXGR1', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'MAP7D2', 'CACNA2D3', 'DPY19L2P4', 'MS4A8', 'SLC5A8', 'HIST1H1D', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PCDH20', 'GABRB2', 'DNAH11', 'TIFAB', 'PON3', 'KLK8', 'FOXN1', 'PHKG1', 'WFIKKN1', 'MASP2', 'CD19', 'GPR171', 'WNT10A', 'FREM2', 'LINC00669', 'ANK1', 'DCST2', 'C19ORF45', 'CRB2', 'CLCA2', 'KCNB1', 'SLC26A3', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'LINC01465', 'LINC00685', 'TYMSOS', 'RASAL1', 'CD1E', 'ANO2', 'RIC3', 'COLCA1', 'CST2', 'HNRNPCL3', 'NEURL3', 'LOC646999', 'MED12L', 'TTC41P', 'PCDHGC5', 'EYA1', 'STXBP6', 'RAB3B', 'CLPSL1', 'MYEOV', 'NRXN1', 'FAM182B', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'TDRD9', 'AJAP1', 'ZNF676', 'CR2', 'CLDN14', 'CXCR2', 'LPAR4', 'KIF4B', 'PATL2', 'FNDC8', 'CLEC4F', 'MSLN', 'KCNRG', 'MKX', 'ABHD1', 'C9ORF117', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 3.0883376074704154e-15 NRMSE: 6.224353764779038e-16 MAPE: 1.7439582607289639e-12 Pearson Correlation: 0.20334713661644063 Spearman Correlation: 0.16428153350892596 Coefficient of Determination: -0.6390205824712107 RMSE: 0.9614079680132976 NRMSE: 0.23852725847598316 MAPE: 461.2411664454568 Predictor: ElasticNet Pearson Correlation: 0.891552910119654 Spearman Correlation: 0.8784037218427704 Coefficient of Determination: 0.7370674024393437 RMSE: 0.3780317344115821 NRMSE: 0.07618996199116879 MAPE: 381.70132231225216 Pearson Correlation: 0.3871652782985032 Spearman Correlation: 0.33544532240757 Coefficient of Determination: 0.10410356477726235 RMSE: 0.7107950877281135 NRMSE: 0.17634969675187653 MAPE: 267.91969099131575 Predictor: RandomForests Pearson Correlation: 0.504934166630769 Spearman Correlation: 0.530375768500797 Coefficient of Determination: 0.2021620766990806 RMSE: 0.6585115257145909 NRMSE: 0.13271893216328898 MAPE: 610.8189524946588 Pearson Correlation: 0.4805331278789748 Spearman Correlation: 0.45674568334796606 Coefficient of Determination: 0.1778848473529664 RMSE: 0.6808976572795028 NRMSE: 0.16893208387820743 MAPE: 255.25270173250226 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'LINC01119', 'IQUB', 'NKPD1', 'LINC01341', 'SOX8', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'PPP1R3G', 'C19ORF18', 'FXYD1', 'RNF138P1', 'CCIN', 'MYCBPAP', 'ETV2', 'XPNPEP2', 'TEKT3', 'STKLD1', 'SLC30A8', 'UGT8', 'SLC28A3', 'CCR8', 'METTL7B', 'HEPACAM2', 'UBE2Q2P1', 'TEX14', 'PLP1', 'SLC25A18', 'JPH4', 'IDI2.AS1', 'CASQ1', 'S100A3', 'LINC00482', 'LRIT3', 'GLIS1', 'SGK2', 'CCDC36', 'NR1I3', 'ALOXE3', 'ZNF843', 'CACNG1', 'MS4A15', 'WNT2B', 'PBX4', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'LGALS2', 'PYGO1', 'TMEM92', 'FUT9', 'ADAMTS8', 'BCHE', 'AOC2', 'GJB1', 'C9ORF43', 'CCDC151', 'FCRL6', 'PNCK', 'PITX2', 'TNNI3K', 'FAM189A1', 'DQX1', 'LPAR3', 'CKMT2', 'ABCA17P', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'NLRP12', 'C1ORF101', 'CLDN9', 'IYD', 'ZNF835', 'SLC6A20', 'OTOA', 'CA3', 'SPIB', 'FAM95B1', 'FAM90A1', 'C1ORF95', 'C2CD4A', 'RYR2', 'PCDH9', 'CCDC158', 'CLEC3A', 'SCN2B', 'CLECL1', 'PCSK1N', 'ULBP3', 'SVOPL', 'LINC01550', 'GSDMC', 'ARC', 'TAS1R3', 'CCDC65', 'IL20RB', 'DDX11L2', 'VSIG1', 'AURKC', 'TTC16', 'ZCCHC18', 'PDE1C', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.8995660912471326 Spearman Correlation: 0.8095625022884522 Coefficient of Determination: 0.8092191525216441 RMSE: 0.2112601478940347 NRMSE: 0.05098345630572548 MAPE: 47.75165992097009 Pearson Correlation: 0.4561773353723235 Spearman Correlation: 0.39854160569700525 Coefficient of Determination: -0.2889514114157379 RMSE: 0.6097122532111794 NRMSE: 0.21717266365491697 MAPE: 97.23968917460154 Predictor: ElasticNet Pearson Correlation: 0.7662951015109425 Spearman Correlation: 0.6947138268200532 Coefficient of Determination: 0.563845992934639 RMSE: 0.3194258992239308 NRMSE: 0.07708712001928972 MAPE: 60.87150995677798 Pearson Correlation: 0.6776879967031533 Spearman Correlation: 0.5938298702565604 Coefficient of Determination: 0.4490074873775868 RMSE: 0.3986387372345899 NRMSE: 0.14199064549762774 MAPE: 52.51850892535774 Predictor: RandomForests Pearson Correlation: 0.5827605095308536 Spearman Correlation: 0.5987656832320156 Coefficient of Determination: 0.3102577510099761 RMSE: 0.40169239265828205 NRMSE: 0.09694051033093179 MAPE: 87.14179696028977 Pearson Correlation: 0.5557288622316139 Spearman Correlation: 0.5209741988275735 Coefficient of Determination: 0.2699600559176638 RMSE: 0.45885974705300714 NRMSE: 0.1634406935184353 MAPE: 62.29628951032247 Protein: CCND1 x_train_column_count: 859 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'LINC01119', 'IQUB', 'NKPD1', 'LINC01341', 'SOX8', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'PPP1R3G', 'C19ORF18', 'FXYD1', 'RNF138P1', 'CCIN', 'MYCBPAP', 'ETV2', 'XPNPEP2', 'TEKT3', 'STKLD1', 'SLC30A8', 'UGT8', 'SLC28A3', 'CCR8', 'METTL7B', 'HEPACAM2', 'UBE2Q2P1', 'TEX14', 'PLP1', 'SLC25A18', 'JPH4', 'IDI2.AS1', 'CASQ1', 'S100A3', 'LINC00482', 'LRIT3', 'GLIS1', 'SGK2', 'CCDC36', 'NR1I3', 'ALOXE3', 'ZNF843', 'CACNG1', 'MS4A15', 'WNT2B', 'PBX4', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'LGALS2', 'PYGO1', 'TMEM92', 'FUT9', 'ADAMTS8', 'BCHE', 'AOC2', 'GJB1', 'C9ORF43', 'CCDC151', 'FCRL6', 'PNCK', 'PITX2', 'TNNI3K', 'FAM189A1', 'DQX1', 'LPAR3', 'CKMT2', 'ABCA17P', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'NLRP12', 'C1ORF101', 'CLDN9', 'IYD', 'ZNF835', 'SLC6A20', 'OTOA', 'CA3', 'SPIB', 'FAM95B1', 'FAM90A1', 'C1ORF95', 'C2CD4A', 'RYR2', 'PCDH9', 'CCDC158', 'CLEC3A', 'SCN2B', 'CLECL1', 'PCSK1N', 'ULBP3', 'SVOPL', 'LINC01550', 'GSDMC', 'ARC', 'TAS1R3', 'CCDC65', 'IL20RB', 'DDX11L2', 'VSIG1', 'AURKC', 'TTC16', 'ZCCHC18', 'PDE1C', 'ALDH8A1', 'COLCA2', 'PCYT1B', 'MYOZ1', 'BPIFB2', 'KNDC1', 'B3GALT5.AS1', 'DUOXA1', 'CRYGS', 'GSTM1', 'PPP1R36', 'KLHL4', 'LOC148709', 'LOC441455', 'CPEB1', 'OR7E91P', 'IL22RA1', 'HOXD3', 'TARP', 'FAM57B', 'LOC90768', 'CAMP', 'JPH3', 'LUZP2', 'FUT7', 'IL12RB2', 'PLA2G5', 'RIMS1', 'FLJ37201', 'LBX2', 'SCARA5', 'RELN', 'HOXB13', 'CD177', 'IGSF5', 'TUBB8', 'SLC22A18AS', 'HIST1H2BN', 'ZBED3.AS1', 'GPR18', 'ASTN1', 'ZC3H12D', 'KCNE1', 'MNX1', 'TCHH', 'CIDEA', 'ONECUT2', 'GAL', 'KCNE2', 'SP5', 'WDR72', 'BTBD8', 'CHRNA6', 'FAM135B', 'IRX4', 'C10ORF128', 'SLC16A10', 'RSPH4A', 'MGC16142', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'CCDC7', 'MGAT5B', 'YPEL4', 'GBP1P1', 'DCSTAMP', 'CELF5', 'CXXC4', 'GRIN2C', 'GPR3', 'SKIDA1', 'OBP2B', 'CXCR5', 'SLC35F1', 'PYDC1', 'SLC30A2', 'HOXA11', 'NIPAL1', 'ATP13A5', 'CCDC153', 'FOXJ1', 'STRC', 'SRL', 'WT1', 'PCSK9', 'PCAT18', 'TNFRSF9', 'LRP1B', 'RPGRIP1', 'INSM1', 'GPR174', 'CNNM1', 'PCK1', 'NOXO1', 'SLC18A2', 'C17ORF104', 'SLC25A53', 'FOXD4', 'DMRT3', 'PPP4R4', 'MARCO', 'GPX2', 'LBP', 'IL20', 'COL23A1', 'INHA', 'FOXD1', 'NOS2', 'PKNOX2', 'BTLA', 'TNFRSF17', 'CRISP3', 'ADH1C', 'KLHL14', 'AVPR2', 'CXCL2', 'GLOD5', 'MYBPC1', 'PARP15', 'GPLD1', 'PFN1P2', 'GPR55', 'CST9', 'SLCO4C1', 'STEAP1B', 'BCL2L14', 'SLC23A1', 'C2ORF40', 'DHRS4L1', 'SCN3A', 'AMH', 'CXCR2P1', 'ZNF98', 'VAT1L', 'ULBP2', 'VSIG2', 'ZNF454', 'RNF212', 'TPSG1', 'VGLL1', 'CYSLTR2', 'HAP1', 'P2RX1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'TMEM105', 'ORM1', 'FAM178B', 'DKK1', 'ZNF488', 'IL23A', 'DPY19L2P2', 'AMBP', 'PRKG2', 'CXCL1', 'SIGLEC17P', 'CRYM', 'SUCNR1', 'DEPDC4', 'SPDYE1', 'FABP7', 'LRRC2', 'GPBAR1', 'CTCFL', 'BRINP1', 'BDKRB1', 'LRGUK', 'XIRP1', 'ADAMTS18', 'VWDE', 'LINC00930', 'FUT6', 'RERGL', 'TENM1', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'KIAA0319', 'NUGGC', 'CECR2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'PKD1L1', 'SSUH2', 'WSCD2', 'CBLN2', 'ECEL1', 'SPESP1', 'SEC14L5', 'ABHD11.AS1', 'FSCN2', 'DMRT2', 'CCL17', 'ZNF732', 'FAM162B', 'PIANP', 'HOXD4', 'GNB3', 'TMEM217', 'CTSG', 'GRIA3', 'RSPO1', 'RGS6', 'SERPINA6', 'ADAMTS19', 'IL1R2', 'MT1A', 'RNF175', 'ADAM32', 'COL2A1', 'CHRNB2', 'FLJ12825', 'POM121L9P', 'PFKFB1', 'RASL10A', 'HECTD2.AS1', 'PRSS21', 'DIRC3', 'LRRC16B', 'CYP46A1', 'SMIM5', 'FOXC2', 'CAPN11', 'ZNF804A', 'IGF2BP3', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'CYSRT1', 'VIPR2', 'GPR87', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'SLC13A2', 'XKR9', 'CA9', 'HTR7', 'HOGA1', 'EMX1', 'WIPF3', 'CEP83.AS1', 'ZSCAN1', 'ZBTB16', 'CITED1', 'OTUD7A', 'TMEM40', 'CYP26A1', 'TMSB15A', 'WFDC3', 'MAPT.IT1', 'CDHR1', 'ANKK1', 'GZMM', 'ROPN1L', 'PVALB', 'FIRRE', 'M1AP', 'MYO3B', 'INE2', 'CRTAC1', 'MRAP2', 'IGSF22', 'RFX8', 'RBM12B.AS1', 'SPAG17', 'TTC23L', 'HEATR4', 'PYGM', 'MROH7', 'PCDHA12', 'CFAP61', 'BTC', 'KCNT2', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'B3GAT1', 'OPCML', 'SRSF12', 'NWD1', 'LRRC4B', 'CIDEC', 'CCBE1', 'ADGRF1', 'CLEC4E', 'MIA', 'LINC00173', 'TMEM59L', 'HPDL', 'TSPAN8', 'RNF182', 'FRMPD1', 'GALNT13', 'SMC1B', 'KCNA6', 'KLK6', 'LSAMP', 'LOC613037', 'ABCC6P2', 'FASLG', 'IL11', 'NLRP7', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'COL28A1', 'C15ORF56', 'FAM83A', 'PSORS1C1', 'ANO5', 'SLC16A11', 'PTCHD1', 'SLC6A14', 'SLC24A5', 'C9ORF47', 'ADGRG2', 'TMPRSS4', 'TUSC5', 'LINC00908', 'RUFY4', 'CYP4F12', 'INTS4P2', 'PIK3C2G', 'IGSF1', 'KCNQ3', 'LOC100133669', 'VENTX', 'MYOM2', 'FAM157A', 'NBPF4', 'EBF2', 'MAG', 'DSCAML1', 'PCDHA5', 'PTPRN', 'KLK7', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'SFTPA2', 'CNTN2', 'ZBTB20', 'FAM19A2', 'NKX3.2', 'DLX5', 'PLAC1', 'CCNI2', 'BRE.AS1', 'OR2W3', 'SLC6A17', 'RYR3', 'GHRLOS', 'ABCC2', 'PTPRR', 'ABCD2', 'TFAP2E', 'CD160', 'GRIA2', 'CD1A', 'DEFB1', 'CCDC144A', 'RGS9', 'DLK2', 'CACNA1I', 'GGT3P', 'CDKL2', 'MYO16', 'PWAR5', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'CABP4', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CHRNA10', 'TCEAL2', 'FKBP1AP1', 'UNC13A', 'AGBL4', 'SLC39A2', 'XCL2', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'ZNF727', 'LINC00202.1', 'KCNH3', 'ARL9', 'TM6SF2', 'MAK', 'SNORD116.4', 'TCN1', 'P2RY12', 'GRID2IP', 'MPL', 'HRCT1', 'PCBP3', 'SYCE3', 'TCTEX1D1', 'ELOVL3', 'GPM6A', 'CD70', 'NOX5', 'SLC46A2', 'SYCE2', 'GRIN2A', 'ARMC3', 'JAKMIP1', 'PGLYRP2', 'TIGD4', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'KLF3.AS1', 'SOSTDC1', 'ASIC3', 'LONRF3', 'LRRC43', 'AGAP7P', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'LOC400927', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'ACHE', 'CEACAM7', 'RIMS2', 'OLFM4', 'CTAGE11P', 'TMEM145', 'CD40LG', 'C6ORF52', 'HRC', 'BEGAIN', 'VN1R1', 'GPR82', 'CXADRP3', 'PAH', 'CHODL', 'TTBK1', 'LOC285593', 'MLLT4.AS1', 'CHST9', 'TTYH1', 'HIST1H2BH', 'APOBEC3A', 'GABRB3', 'ADGRL3', 'SLC25A34', 'BRSK2', 'TRH', 'MAPK4', 'CAMK4', 'DGCR5', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'EPYC', 'GBP6', 'MUC15', 'GPR63', 'CAPSL', 'SLC35F3', 'ANKLE1', 'IL17D', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'TNFSF11', 'RMRP', 'FAM201A', 'HAMP', 'MYO15A', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'PTX3', 'DCLK3', 'RHCE', 'NEK5', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.004749574988021e-15 NRMSE: 1.2051974696637175e-15 MAPE: 4.894171211162293e-12 Pearson Correlation: 0.09407622522612177 Spearman Correlation: 0.08769388352355868 Coefficient of Determination: -1.25840581140943 RMSE: 0.35307867383944336 NRMSE: 0.25146620836379935 MAPE: 4756.332027470384 Predictor: ElasticNet Pearson Correlation: 0.600045976155611 Spearman Correlation: 0.589528033808291 Coefficient of Determination: 0.27538205102492397 RMSE: 0.20335731439212482 NRMSE: 0.12225253657652597 MAPE: 318.7294678050602 Pearson Correlation: 0.29199359703462674 Spearman Correlation: 0.3030289727831431 Coefficient of Determination: 0.0843299734669114 RMSE: 0.22482261476418877 NRMSE: 0.1601209437953598 MAPE: 1522.7254573027872 Predictor: RandomForests Pearson Correlation: 0.5400045185281005 Spearman Correlation: 0.5611955595766436 Coefficient of Determination: 0.1455562326195029 RMSE: 0.22082436853271217 NRMSE: 0.13275322440075998 MAPE: 368.84863864916883 Pearson Correlation: 0.32993656188677545 Spearman Correlation: 0.3532387084186909 Coefficient of Determination: 0.07673841564619788 RMSE: 0.22575266099648592 NRMSE: 0.16078333214381368 MAPE: 1314.3415880688337 Protein: ERBB2 x_train_column_count: 666 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'LINC01119', 'IQUB', 'NKPD1', 'LINC01341', 'SOX8', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'PPP1R3G', 'C19ORF18', 'FXYD1', 'RNF138P1', 'CCIN', 'MYCBPAP', 'ETV2', 'XPNPEP2', 'TEKT3', 'STKLD1', 'SLC30A8', 'UGT8', 'SLC28A3', 'CCR8', 'METTL7B', 'HEPACAM2', 'UBE2Q2P1', 'TEX14', 'PLP1', 'SLC25A18', 'JPH4', 'IDI2.AS1', 'CASQ1', 'S100A3', 'LINC00482', 'LRIT3', 'GLIS1', 'SGK2', 'CCDC36', 'NR1I3', 'ALOXE3', 'ZNF843', 'CACNG1', 'MS4A15', 'WNT2B', 'PBX4', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'LGALS2', 'PYGO1', 'TMEM92', 'FUT9', 'ADAMTS8', 'BCHE', 'AOC2', 'GJB1', 'C9ORF43', 'CCDC151', 'FCRL6', 'PNCK', 'PITX2', 'TNNI3K', 'FAM189A1', 'DQX1', 'LPAR3', 'CKMT2', 'ABCA17P', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'NLRP12', 'C1ORF101', 'CLDN9', 'IYD', 'ZNF835', 'SLC6A20', 'OTOA', 'CA3', 'SPIB', 'FAM95B1', 'FAM90A1', 'C1ORF95', 'C2CD4A', 'RYR2', 'PCDH9', 'CCDC158', 'CLEC3A', 'SCN2B', 'CLECL1', 'PCSK1N', 'ULBP3', 'SVOPL', 'LINC01550', 'GSDMC', 'ARC', 'TAS1R3', 'CCDC65', 'IL20RB', 'DDX11L2', 'VSIG1', 'AURKC', 'TTC16', 'ZCCHC18', 'PDE1C', 'ALDH8A1', 'COLCA2', 'PCYT1B', 'MYOZ1', 'BPIFB2', 'KNDC1', 'B3GALT5.AS1', 'DUOXA1', 'CRYGS', 'GSTM1', 'PPP1R36', 'KLHL4', 'LOC148709', 'LOC441455', 'CPEB1', 'OR7E91P', 'IL22RA1', 'HOXD3', 'TARP', 'FAM57B', 'LOC90768', 'CAMP', 'JPH3', 'LUZP2', 'FUT7', 'IL12RB2', 'PLA2G5', 'RIMS1', 'FLJ37201', 'LBX2', 'SCARA5', 'RELN', 'HOXB13', 'CD177', 'IGSF5', 'TUBB8', 'SLC22A18AS', 'HIST1H2BN', 'ZBED3.AS1', 'GPR18', 'ASTN1', 'ZC3H12D', 'KCNE1', 'MNX1', 'TCHH', 'CIDEA', 'ONECUT2', 'GAL', 'KCNE2', 'SP5', 'WDR72', 'BTBD8', 'CHRNA6', 'FAM135B', 'IRX4', 'C10ORF128', 'SLC16A10', 'RSPH4A', 'MGC16142', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'CCDC7', 'MGAT5B', 'YPEL4', 'GBP1P1', 'DCSTAMP', 'CELF5', 'CXXC4', 'GRIN2C', 'GPR3', 'SKIDA1', 'OBP2B', 'CXCR5', 'SLC35F1', 'PYDC1', 'SLC30A2', 'HOXA11', 'NIPAL1', 'ATP13A5', 'CCDC153', 'FOXJ1', 'STRC', 'SRL', 'WT1', 'PCSK9', 'PCAT18', 'TNFRSF9', 'LRP1B', 'RPGRIP1', 'INSM1', 'GPR174', 'CNNM1', 'PCK1', 'NOXO1', 'SLC18A2', 'C17ORF104', 'SLC25A53', 'FOXD4', 'DMRT3', 'PPP4R4', 'MARCO', 'GPX2', 'LBP', 'IL20', 'COL23A1', 'INHA', 'FOXD1', 'NOS2', 'PKNOX2', 'BTLA', 'TNFRSF17', 'CRISP3', 'ADH1C', 'KLHL14', 'AVPR2', 'CXCL2', 'GLOD5', 'MYBPC1', 'PARP15', 'GPLD1', 'PFN1P2', 'GPR55', 'CST9', 'SLCO4C1', 'STEAP1B', 'BCL2L14', 'SLC23A1', 'C2ORF40', 'DHRS4L1', 'SCN3A', 'AMH', 'CXCR2P1', 'ZNF98', 'VAT1L', 'ULBP2', 'VSIG2', 'ZNF454', 'RNF212', 'TPSG1', 'VGLL1', 'CYSLTR2', 'HAP1', 'P2RX1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'TMEM105', 'ORM1', 'FAM178B', 'DKK1', 'ZNF488', 'IL23A', 'DPY19L2P2', 'AMBP', 'PRKG2', 'CXCL1', 'SIGLEC17P', 'CRYM', 'SUCNR1', 'DEPDC4', 'SPDYE1', 'FABP7', 'LRRC2', 'GPBAR1', 'CTCFL', 'BRINP1', 'BDKRB1', 'LRGUK', 'XIRP1', 'ADAMTS18', 'VWDE', 'LINC00930', 'FUT6', 'RERGL', 'TENM1', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'KIAA0319', 'NUGGC', 'CECR2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'PKD1L1', 'SSUH2', 'WSCD2', 'CBLN2', 'ECEL1', 'SPESP1', 'SEC14L5', 'ABHD11.AS1', 'FSCN2', 'DMRT2', 'CCL17', 'ZNF732', 'FAM162B', 'PIANP', 'HOXD4', 'GNB3', 'TMEM217', 'CTSG', 'GRIA3', 'RSPO1', 'RGS6', 'SERPINA6', 'ADAMTS19', 'IL1R2', 'MT1A', 'RNF175', 'ADAM32', 'COL2A1', 'CHRNB2', 'FLJ12825', 'POM121L9P', 'PFKFB1', 'RASL10A', 'HECTD2.AS1', 'PRSS21', 'DIRC3', 'LRRC16B', 'CYP46A1', 'SMIM5', 'FOXC2', 'CAPN11', 'ZNF804A', 'IGF2BP3', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'CYSRT1', 'VIPR2', 'GPR87', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'SLC13A2', 'XKR9', 'CA9', 'HTR7', 'HOGA1', 'EMX1', 'WIPF3', 'CEP83.AS1', 'ZSCAN1', 'ZBTB16', 'CITED1', 'OTUD7A', 'TMEM40', 'CYP26A1', 'TMSB15A', 'WFDC3', 'MAPT.IT1', 'CDHR1', 'ANKK1', 'GZMM', 'ROPN1L', 'PVALB', 'FIRRE', 'M1AP', 'MYO3B', 'INE2', 'CRTAC1', 'MRAP2', 'IGSF22', 'RFX8', 'RBM12B.AS1', 'SPAG17', 'TTC23L', 'HEATR4', 'PYGM', 'MROH7', 'PCDHA12', 'CFAP61', 'BTC', 'KCNT2', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'B3GAT1', 'OPCML', 'SRSF12', 'NWD1', 'LRRC4B', 'CIDEC', 'CCBE1', 'ADGRF1', 'CLEC4E', 'MIA', 'LINC00173', 'TMEM59L', 'HPDL', 'TSPAN8', 'RNF182', 'FRMPD1', 'GALNT13', 'SMC1B', 'KCNA6', 'KLK6', 'LSAMP', 'LOC613037', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 7.464250851551974e-15 NRMSE: 1.2716579810811412e-15 MAPE: 7.423819165802129e-12 Pearson Correlation: 0.23689332539706298 Spearman Correlation: 0.20788703541117942 Coefficient of Determination: -3.291134274532065 RMSE: 1.8789391876066477 NRMSE: 0.34840333536188534 MAPE: 1844.0638342387222 Predictor: ElasticNet Pearson Correlation: 0.8951875741607087 Spearman Correlation: 0.7940437294293629 Coefficient of Determination: 0.7755064909300006 RMSE: 0.4828747523265023 NRMSE: 0.08226566133303274 MAPE: 790.9057319088132 Pearson Correlation: 0.6289937724904119 Spearman Correlation: 0.5875036581796899 Coefficient of Determination: 0.3806636914802305 RMSE: 0.7138220228958945 NRMSE: 0.13236084236897727 MAPE: 692.392723623118 Predictor: RandomForests Pearson Correlation: 0.5812646571301153 Spearman Correlation: 0.5500395115102583 Coefficient of Determination: 0.29712116855122306 RMSE: 0.8544228142813297 NRMSE: 0.14556498871855966 MAPE: 698.5954763570832 Pearson Correlation: 0.32329287526182504 Spearman Correlation: 0.4316554482489514 Coefficient of Determination: 0.09382156720436752 RMSE: 0.8634427215626689 NRMSE: 0.16010434295617818 MAPE: 356.68614651151773 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.7565467042176283 Spearman Correlation: 0.7505038468266906 Coefficient of Determination: 0.5723629156625554 RMSE: 0.30024863266704854 NRMSE: 0.08102848833401662 MAPE: 171.89990051263726 Pearson Correlation: 0.32922342418010464 Spearman Correlation: 0.3318680273488315 Coefficient of Determination: -0.21338657469729116 RMSE: 0.5127870843187574 NRMSE: 0.20576009739292717 MAPE: 350.9350730401587 Predictor: ElasticNet Pearson Correlation: 0.618927609926515 Spearman Correlation: 0.6274048115507288 Coefficient of Determination: 0.3524349346178046 RMSE: 0.36947500540274314 NRMSE: 0.0997106994261843 MAPE: 177.87247378139062 Pearson Correlation: 0.3987779372406433 Spearman Correlation: 0.40771681752641953 Coefficient of Determination: 0.1529653429467266 RMSE: 0.4284380907903878 NRMSE: 0.17191435974832586 MAPE: 249.89776763476016 Predictor: RandomForests Pearson Correlation: 0.4944273833372727 Spearman Correlation: 0.5165700948140637 Coefficient of Determination: 0.19795165454717667 RMSE: 0.41119102991907436 NRMSE: 0.11096865712556689 MAPE: 199.81575660191368 Pearson Correlation: 0.3397005517069244 Spearman Correlation: 0.3303169572689965 Coefficient of Determination: 0.10033226507657289 RMSE: 0.44154864666745913 NRMSE: 0.17717507971697607 MAPE: 241.2465045777347 Fold: 2 Protein: RB1 x_train_column_count: 371 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'IQUB', 'LINC01119', 'CBLN4', 'NKPD1', 'LINC01341', 'SOX8', 'EYS', 'ECT2L', 'PAX2', 'FXYD1', 'PPP1R3G', 'RNF138P1', 'CCR8', 'CCIN', 'MYCBPAP', 'XPNPEP2', 'ETV2', 'TEKT3', 'STKLD1', 'SLC30A8', 'C19ORF18', 'UGT8', 'SLC28A3', 'JPH4', 'UBE2Q2P1', 'METTL7B', 'SLC25A18', 'HEPACAM2', 'CASQ1', 'PLP1', 'TEX14', 'IDI2.AS1', 'S100A3', 'GLIS1', 'SGK2', 'ZNF843', 'LRIT3', 'CCDC36', 'NR1I3', 'LINC00482', 'ALOXE3', 'CACNG1', 'WNT2B', 'MS4A15', 'PBX4', 'ZIC2', 'ST6GALNAC1', 'GTSE1.AS1', 'ADAMTS8', 'PYGO1', 'LGALS2', 'TMEM92', 'FUT9', 'FCRL6', 'CCDC151', 'C9ORF43', 'PITX2', 'BCHE', 'PNCK', 'TNNI3K', 'AOC2', 'GJB1', 'DQX1', 'CKMT2', 'LPAR3', 'FAM189A1', 'ABCA17P', 'CACNA1G', 'C2ORF50', 'C1ORF101', 'NLRP12', 'ADCYAP1', 'ENPP6', 'SLC6A20', 'IYD', 'ZNF835', 'OTOA', 'CA3', 'SPIB', 'CLDN9', 'FAM95B1', 'FAM90A1', 'RYR2', 'C2CD4A', 'C1ORF95', 'PCDH9', 'LINC01550', 'CLEC3A', 'SVOPL', 'CCDC158', 'SCN2B', 'VSIG1', 'CLECL1', 'PCSK1N', 'IL20RB', 'ARC', 'CCDC65', 'TAS1R3', 'GSDMC', 'TTC16', 'AURKC', 'ZCCHC18', 'ULBP3', 'DDX11L2', 'DUOXA1', 'B3GALT5.AS1', 'ALDH8A1', 'KNDC1', 'COLCA2', 'GSTM1', 'PCYT1B', 'BPIFB2', 'MYOZ1', 'PDE1C', 'CRYGS', 'PPP1R36', 'TARP', 'KLHL4', 'LOC148709', 'LUZP2', 'LOC441455', 'JPH3', 'CPEB1', 'IL22RA1', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.8578303529457928 Spearman Correlation: 0.7845953045100347 Coefficient of Determination: 0.7358729144351038 RMSE: 0.1207953873050854 NRMSE: 0.04417619488922082 MAPE: 451.9424178722512 Pearson Correlation: 0.06565029331565415 Spearman Correlation: 0.13271875914544923 Coefficient of Determination: -1.6161432980036143 RMSE: 0.39611994368485015 NRMSE: 0.2269482094194235 MAPE: 2187.0415085438285 Predictor: ElasticNet Pearson Correlation: 0.5218695786706964 Spearman Correlation: 0.471966686267113 Coefficient of Determination: 0.2101099536342952 RMSE: 0.2088945942834463 NRMSE: 0.07639503886901929 MAPE: 246.77637428652613 Pearson Correlation: 0.1280305845867133 Spearman Correlation: 0.20700907228563067 Coefficient of Determination: -0.007516644694659069 RMSE: 0.24582274229357393 NRMSE: 0.14083873353896137 MAPE: 255.68999343001266 Predictor: RandomForests Pearson Correlation: 0.45349470752490856 Spearman Correlation: 0.4311161064524317 Coefficient of Determination: 0.13488426688064703 RMSE: 0.21861551791545544 NRMSE: 0.07995008700828535 MAPE: 179.9909349997878 Pearson Correlation: 0.16724489473055335 Spearman Correlation: 0.2232416349624427 Coefficient of Determination: 0.014438972590626209 RMSE: 0.24312952698441143 NRMSE: 0.13929571506251298 MAPE: 187.93881520012025 Protein: CDH1 x_train_column_count: 836 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'IQUB', 'LINC01119', 'CBLN4', 'NKPD1', 'LINC01341', 'SOX8', 'EYS', 'ECT2L', 'PAX2', 'FXYD1', 'PPP1R3G', 'RNF138P1', 'CCR8', 'CCIN', 'MYCBPAP', 'XPNPEP2', 'ETV2', 'TEKT3', 'STKLD1', 'SLC30A8', 'C19ORF18', 'UGT8', 'SLC28A3', 'JPH4', 'UBE2Q2P1', 'METTL7B', 'SLC25A18', 'HEPACAM2', 'CASQ1', 'PLP1', 'TEX14', 'IDI2.AS1', 'S100A3', 'GLIS1', 'SGK2', 'ZNF843', 'LRIT3', 'CCDC36', 'NR1I3', 'LINC00482', 'ALOXE3', 'CACNG1', 'WNT2B', 'MS4A15', 'PBX4', 'ZIC2', 'ST6GALNAC1', 'GTSE1.AS1', 'ADAMTS8', 'PYGO1', 'LGALS2', 'TMEM92', 'FUT9', 'FCRL6', 'CCDC151', 'C9ORF43', 'PITX2', 'BCHE', 'PNCK', 'TNNI3K', 'AOC2', 'GJB1', 'DQX1', 'CKMT2', 'LPAR3', 'FAM189A1', 'ABCA17P', 'CACNA1G', 'C2ORF50', 'C1ORF101', 'NLRP12', 'ADCYAP1', 'ENPP6', 'SLC6A20', 'IYD', 'ZNF835', 'OTOA', 'CA3', 'SPIB', 'CLDN9', 'FAM95B1', 'FAM90A1', 'RYR2', 'C2CD4A', 'C1ORF95', 'PCDH9', 'LINC01550', 'CLEC3A', 'SVOPL', 'CCDC158', 'SCN2B', 'VSIG1', 'CLECL1', 'PCSK1N', 'IL20RB', 'ARC', 'CCDC65', 'TAS1R3', 'GSDMC', 'TTC16', 'AURKC', 'ZCCHC18', 'ULBP3', 'DDX11L2', 'DUOXA1', 'B3GALT5.AS1', 'ALDH8A1', 'KNDC1', 'COLCA2', 'GSTM1', 'PCYT1B', 'BPIFB2', 'MYOZ1', 'PDE1C', 'CRYGS', 'PPP1R36', 'TARP', 'KLHL4', 'LOC148709', 'LUZP2', 'LOC441455', 'JPH3', 'CPEB1', 'IL22RA1', 'HOXD3', 'FAM57B', 'LOC90768', 'CAMP', 'OR7E91P', 'FLJ37201', 'RIMS1', 'IL12RB2', 'RELN', 'LBX2', 'FUT7', 'SCARA5', 'PLA2G5', 'KCNE1', 'IGSF5', 'TUBB8', 'HIST1H2BN', 'GPR18', 'ZBED3.AS1', 'SLC22A18AS', 'HOXB13', 'CD177', 'ZC3H12D', 'MNX1', 'ASTN1', 'CIDEA', 'TCHH', 'ONECUT2', 'C10ORF128', 'GAL', 'SP5', 'WDR72', 'CHRNA6', 'KCNE2', 'IRX4', 'FAM135B', 'BTBD8', 'SLC16A10', 'RSPH4A', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'MGC16142', 'CCDC7', 'DCSTAMP', 'CELF5', 'GRIN2C', 'MGAT5B', 'GBP1P1', 'CXXC4', 'YPEL4', 'GPR3', 'CXCR5', 'HOXA11', 'SLC30A2', 'OBP2B', 'SLC35F1', 'ATP13A5', 'NIPAL1', 'PYDC1', 'SKIDA1', 'CCDC153', 'RPGRIP1', 'SRL', 'STRC', 'WT1', 'TNFRSF9', 'LRP1B', 'PCSK9', 'PCAT18', 'FOXJ1', 'SLC18A2', 'PPP4R4', 'NOXO1', 'PCK1', 'INSM1', 'CNNM1', 'GPR174', 'MARCO', 'SLC25A53', 'C17ORF104', 'FOXD4', 'DMRT3', 'GPX2', 'INHA', 'COL23A1', 'NOS2', 'ADH1C', 'FOXD1', 'PKNOX2', 'KLHL14', 'BTLA', 'CRISP3', 'LBP', 'IL20', 'TNFRSF17', 'AVPR2', 'GLOD5', 'MYBPC1', 'PARP15', 'CXCL2', 'GPLD1', 'PFN1P2', 'CST9', 'GPR55', 'SLCO4C1', 'SLC23A1', 'STEAP1B', 'C2ORF40', 'BCL2L14', 'DHRS4L1', 'SCN3A', 'AMH', 'ULBP2', 'CXCR2P1', 'VAT1L', 'ZNF98', 'VSIG2', 'RNF212', 'VGLL1', 'HAP1', 'CYSLTR2', 'ZNF454', 'TPSG1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'ORM1', 'ZNF488', 'TMEM105', 'FAM178B', 'P2RX1', 'DKK1', 'DPY19L2P2', 'IL23A', 'SIGLEC17P', 'CRYM', 'PRKG2', 'CXCL1', 'AMBP', 'BRINP1', 'CTCFL', 'SUCNR1', 'DEPDC4', 'FABP7', 'SPDYE1', 'LRRC2', 'GPBAR1', 'XIRP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'FUT6', 'RERGL', 'BDKRB1', 'TENM1', 'LINC00930', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'NUGGC', 'KIAA0319', 'CECR2', 'SORCS1', 'ABHD11.AS1', 'PCDHGA3', 'PKD1L1', 'FAM184B', 'ECEL1', 'CBLN2', 'WSCD2', 'SPESP1', 'SEC14L5', 'SSUH2', 'FSCN2', 'DMRT2', 'FAM162B', 'CCL17', 'ZNF732', 'HOXD4', 'PIANP', 'TMEM217', 'GRIA3', 'CTSG', 'GNB3', 'RSPO1', 'RGS6', 'COL2A1', 'SERPINA6', 'MT1A', 'ADAMTS19', 'IL1R2', 'RNF175', 'CHRNB2', 'ADAM32', 'FLJ12825', 'RASL10A', 'PFKFB1', 'POM121L9P', 'HECTD2.AS1', 'DIRC3', 'PRSS21', 'SMIM5', 'CYP46A1', 'LRRC16B', 'CAPN11', 'IGF2BP3', 'VIPR2', 'TRAT1', 'ZNF804A', 'TBX21', 'HIST1H2BE', 'GPR87', 'LOC100126784', 'CYSRT1', 'PART1', 'FOXC2', 'HOGA1', 'EMX1', 'CA9', 'ZSCAN1', 'HTR7', 'CEP83.AS1', 'SLC13A2', 'XKR9', 'WIPF3', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'OTUD7A', 'CITED1', 'ZBTB16', 'CYP26A1', 'TMEM40', 'TMSB15A', 'PVALB', 'ANKK1', 'WFDC3', 'MAPT.IT1', 'ROPN1L', 'MYO3B', 'GZMM', 'CDHR1', 'FIRRE', 'M1AP', 'MRAP2', 'INE2', 'RFX8', 'TTC23L', 'IGSF22', 'CRTAC1', 'RBM12B.AS1', 'SPAG17', 'MROH7', 'KCNT2', 'PYGM', 'PCDHA12', 'CFAP61', 'BTC', 'HEATR4', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'NWD1', 'CLEC4E', 'LRRC4B', 'SRSF12', 'B3GAT1', 'CCBE1', 'OPCML', 'ADGRF1', 'MIA', 'LINC00173', 'TMEM59L', 'CIDEC', 'HPDL', 'NLRP7', 'RNF182', 'FRMPD1', 'SMC1B', 'KCNA6', 'KLK6', 'ABCC6P2', 'FASLG', 'IL11', 'LOC613037', 'LSAMP', 'GALNT13', 'TSPAN8', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'C15ORF56', 'FAM83A', 'COL28A1', 'PSORS1C1', 'ANO5', 'SLC6A14', 'SLC16A11', 'PTCHD1', 'TMPRSS4', 'C9ORF47', 'ADGRG2', 'SLC24A5', 'TUSC5', 'CYP4F12', 'LOC100133669', 'RUFY4', 'LINC00908', 'KCNQ3', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'VENTX', 'NBPF4', 'MYOM2', 'FAM157A', 'EBF2', 'MAG', 'DSCAML1', 'PTPRN', 'PCDHA5', 'KLK7', 'CCNI2', 'CDKN2B.AS1', 'SYT6', 'DLX2', 'SFTPA2', 'ZBTB20', 'NKX3.2', 'DLX5', 'FAM19A2', 'PLAC1', 'BRE.AS1', 'CNTN2', 'OR2W3', 'SLC6A17', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'TFAP2E', 'CD160', 'ABCD2', 'CD1A', 'GRIA2', 'CCDC144A', 'DEFB1', 'RGS9', 'CACNA1I', 'GGT3P', 'DLK2', 'MYO16', 'PWAR5', 'CDKL2', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CABP4', 'CHRNA10', 'TCEAL2', 'UNC13A', 'FKBP1AP1', 'LY6H', 'AGBL4', 'SLC39A2', 'XCL2', 'TUBAL3', 'S100A7', 'SPAG8', 'PCBP3', 'MPL', 'KCNH3', 'LINC00202.1', 'ARL9', 'TM6SF2', 'ZNF727', 'GRID2IP', 'P2RY12', 'MAK', 'TCN1', 'HRCT1', 'SNORD116.4', 'ELOVL3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'GPM6A', 'CD70', 'SYCE3', 'SYCE2', 'PGLYRP2', 'TIGD4', 'GRIN2A', 'JAKMIP1', 'ARMC3', 'BAIAP2L2', 'RAB9B', 'CTAGE6', 'MKRN3', 'SOSTDC1', 'ASIC3', 'KLF3.AS1', 'LONRF3', 'AGAP7P', 'LRRC43', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'LOC400927', 'ACHE', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'HRC', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'GPR82', 'CHODL', 'CXADRP3', 'TTBK1', 'LOC285593', 'PAH', 'TTYH1', 'HIST1H2BH', 'ADGRL3', 'MLLT4.AS1', 'APOBEC3A', 'CHST9', 'GABRB3', 'SLC25A34', 'MAPK4', 'BRSK2', 'TRH', 'DNASE1L2', 'C8ORF46', 'ST8SIA2', 'CAMK4', 'DGCR5', 'EPYC', 'GBP6', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 4.669152120123989e-15 NRMSE: 7.490418095971748e-16 MAPE: 5.222050308059627e-12 Pearson Correlation: 0.4168118061260681 Spearman Correlation: 0.4024192761681788 Coefficient of Determination: -0.4348688685084017 RMSE: 1.3782817201621707 NRMSE: 0.2447667768002434 MAPE: 503.66258414892775 Predictor: ElasticNet Pearson Correlation: 0.9180548408835203 Spearman Correlation: 0.8641100121291323 Coefficient of Determination: 0.8010060345842588 RMSE: 0.49988434669748916 NRMSE: 0.08019320553420857 MAPE: 235.66887916788204 Pearson Correlation: 0.5424689152724902 Spearman Correlation: 0.5232952882645596 Coefficient of Determination: 0.24343924771706538 RMSE: 1.0008149718750878 NRMSE: 0.17773307971498628 MAPE: 233.49463908576018 Predictor: RandomForests Pearson Correlation: 0.6507549541417902 Spearman Correlation: 0.5821633846341023 Coefficient of Determination: 0.4168824454117347 RMSE: 0.8557120393351876 NRMSE: 0.13727633582019533 MAPE: 245.67971974543877 Pearson Correlation: 0.5972286109503283 Spearman Correlation: 0.6409210853704442 Coefficient of Determination: 0.319774688189184 RMSE: 0.9489826751238722 NRMSE: 0.168528267647642 MAPE: 171.86138357041943 Protein: CDH2 x_train_column_count: 474 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'IQUB', 'LINC01119', 'CBLN4', 'NKPD1', 'LINC01341', 'SOX8', 'EYS', 'ECT2L', 'PAX2', 'FXYD1', 'PPP1R3G', 'RNF138P1', 'CCR8', 'CCIN', 'MYCBPAP', 'XPNPEP2', 'ETV2', 'TEKT3', 'STKLD1', 'SLC30A8', 'C19ORF18', 'UGT8', 'SLC28A3', 'JPH4', 'UBE2Q2P1', 'METTL7B', 'SLC25A18', 'HEPACAM2', 'CASQ1', 'PLP1', 'TEX14', 'IDI2.AS1', 'S100A3', 'GLIS1', 'SGK2', 'ZNF843', 'LRIT3', 'CCDC36', 'NR1I3', 'LINC00482', 'ALOXE3', 'CACNG1', 'WNT2B', 'MS4A15', 'PBX4', 'ZIC2', 'ST6GALNAC1', 'GTSE1.AS1', 'ADAMTS8', 'PYGO1', 'LGALS2', 'TMEM92', 'FUT9', 'FCRL6', 'CCDC151', 'C9ORF43', 'PITX2', 'BCHE', 'PNCK', 'TNNI3K', 'AOC2', 'GJB1', 'DQX1', 'CKMT2', 'LPAR3', 'FAM189A1', 'ABCA17P', 'CACNA1G', 'C2ORF50', 'C1ORF101', 'NLRP12', 'ADCYAP1', 'ENPP6', 'SLC6A20', 'IYD', 'ZNF835', 'OTOA', 'CA3', 'SPIB', 'CLDN9', 'FAM95B1', 'FAM90A1', 'RYR2', 'C2CD4A', 'C1ORF95', 'PCDH9', 'LINC01550', 'CLEC3A', 'SVOPL', 'CCDC158', 'SCN2B', 'VSIG1', 'CLECL1', 'PCSK1N', 'IL20RB', 'ARC', 'CCDC65', 'TAS1R3', 'GSDMC', 'TTC16', 'AURKC', 'ZCCHC18', 'ULBP3', 'DDX11L2', 'DUOXA1', 'B3GALT5.AS1', 'ALDH8A1', 'KNDC1', 'COLCA2', 'GSTM1', 'PCYT1B', 'BPIFB2', 'MYOZ1', 'PDE1C', 'CRYGS', 'PPP1R36', 'TARP', 'KLHL4', 'LOC148709', 'LUZP2', 'LOC441455', 'JPH3', 'CPEB1', 'IL22RA1', 'HOXD3', 'FAM57B', 'LOC90768', 'CAMP', 'OR7E91P', 'FLJ37201', 'RIMS1', 'IL12RB2', 'RELN', 'LBX2', 'FUT7', 'SCARA5', 'PLA2G5', 'KCNE1', 'IGSF5', 'TUBB8', 'HIST1H2BN', 'GPR18', 'ZBED3.AS1', 'SLC22A18AS', 'HOXB13', 'CD177', 'ZC3H12D', 'MNX1', 'ASTN1', 'CIDEA', 'TCHH', 'ONECUT2', 'C10ORF128', 'GAL', 'SP5', 'WDR72', 'CHRNA6', 'KCNE2', 'IRX4', 'FAM135B', 'BTBD8', 'SLC16A10', 'RSPH4A', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'MGC16142', 'CCDC7', 'DCSTAMP', 'CELF5', 'GRIN2C', 'MGAT5B', 'GBP1P1', 'CXXC4', 'YPEL4', 'GPR3', 'CXCR5', 'HOXA11', 'SLC30A2', 'OBP2B', 'SLC35F1', 'ATP13A5', 'NIPAL1', 'PYDC1', 'SKIDA1', 'CCDC153', 'RPGRIP1', 'SRL', 'STRC', 'WT1', 'TNFRSF9', 'LRP1B', 'PCSK9', 'PCAT18', 'FOXJ1', 'SLC18A2', 'PPP4R4', 'NOXO1', 'PCK1', 'INSM1', 'CNNM1', 'GPR174', 'MARCO', 'SLC25A53', 'C17ORF104', 'FOXD4', 'DMRT3', 'GPX2', 'INHA', 'COL23A1', 'NOS2', 'ADH1C', 'FOXD1', 'PKNOX2', 'KLHL14', 'BTLA', 'CRISP3', 'LBP', 'IL20', 'TNFRSF17', 'AVPR2', 'GLOD5', 'MYBPC1', 'PARP15', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.951978918380492 Spearman Correlation: 0.932989253527897 Coefficient of Determination: 0.9062638610408909 RMSE: 0.11269828983318107 NRMSE: 0.04083567281439999 MAPE: 1306.8265440887503 Pearson Correlation: 0.09041690235958305 Spearman Correlation: 0.09125451175495075 Coefficient of Determination: -4.776464766562691 RMSE: 0.930319705705494 NRMSE: 0.4901140075470027 MAPE: 2160.3785214250984 Predictor: ElasticNet Pearson Correlation: 0.6755319142070144 Spearman Correlation: 0.6621844721605139 Coefficient of Determination: 0.3543659003338624 RMSE: 0.29577197776874603 NRMSE: 0.10717152611375681 MAPE: 1902.6616145684568 Pearson Correlation: 0.22147084903087427 Spearman Correlation: 0.2774119598087992 Coefficient of Determination: 0.03793400231910182 RMSE: 0.37966764511589024 NRMSE: 0.2000177250277321 MAPE: 167.31881109274985 Predictor: RandomForests Pearson Correlation: 0.4578089436879612 Spearman Correlation: 0.46337541630447 Coefficient of Determination: 0.11893762839260225 RMSE: 0.34551517182954106 NRMSE: 0.12519572861422607 MAPE: 826.3279139347338 Pearson Correlation: 0.3453027172686356 Spearman Correlation: 0.4094234708808897 Coefficient of Determination: 0.07890239461338333 RMSE: 0.37149586351505115 NRMSE: 0.19571264086728332 MAPE: 121.43529583255706 Protein: CDH3 x_train_column_count: 79 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.5615559706379264 Spearman Correlation: 0.564979763791106 Coefficient of Determination: 0.31534510815910366 RMSE: 0.17186457853519074 NRMSE: 0.12934499750528003 MAPE: 339.56605003568103 Pearson Correlation: 0.40629534570305337 Spearman Correlation: 0.4213979123987904 Coefficient of Determination: 0.01573942547192697 RMSE: 0.19636368553891437 NRMSE: 0.16157630670526982 MAPE: 807.6446321315542 Predictor: ElasticNet Pearson Correlation: 0.4888069839826531 Spearman Correlation: 0.5026100457070394 Coefficient of Determination: 0.21052579911825064 RMSE: 0.1845523122275716 NRMSE: 0.13889376489397512 MAPE: 233.52734405460467 Pearson Correlation: 0.38469751086345516 Spearman Correlation: 0.4133011413520633 Coefficient of Determination: 0.017338372469785424 RMSE: 0.1962041227403583 NRMSE: 0.1614450117175663 MAPE: 953.9810061436369 Predictor: RandomForests Pearson Correlation: 0.49008871279797767 Spearman Correlation: 0.49839166164741044 Coefficient of Determination: 0.18651298370328595 RMSE: 0.18733797974612773 NRMSE: 0.14099025366035817 MAPE: 223.34222211450245 Pearson Correlation: 0.35807779070884727 Spearman Correlation: 0.3962198809872208 Coefficient of Determination: -0.010370811634680344 RMSE: 0.19895118296549816 NRMSE: 0.16370540851271143 MAPE: 830.0082874294346 Protein: PTEN x_train_column_count: 886 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'IQUB', 'LINC01119', 'CBLN4', 'NKPD1', 'LINC01341', 'SOX8', 'EYS', 'ECT2L', 'PAX2', 'FXYD1', 'PPP1R3G', 'RNF138P1', 'CCR8', 'CCIN', 'MYCBPAP', 'XPNPEP2', 'ETV2', 'TEKT3', 'STKLD1', 'SLC30A8', 'C19ORF18', 'UGT8', 'SLC28A3', 'JPH4', 'UBE2Q2P1', 'METTL7B', 'SLC25A18', 'HEPACAM2', 'CASQ1', 'PLP1', 'TEX14', 'IDI2.AS1', 'S100A3', 'GLIS1', 'SGK2', 'ZNF843', 'LRIT3', 'CCDC36', 'NR1I3', 'LINC00482', 'ALOXE3', 'CACNG1', 'WNT2B', 'MS4A15', 'PBX4', 'ZIC2', 'ST6GALNAC1', 'GTSE1.AS1', 'ADAMTS8', 'PYGO1', 'LGALS2', 'TMEM92', 'FUT9', 'FCRL6', 'CCDC151', 'C9ORF43', 'PITX2', 'BCHE', 'PNCK', 'TNNI3K', 'AOC2', 'GJB1', 'DQX1', 'CKMT2', 'LPAR3', 'FAM189A1', 'ABCA17P', 'CACNA1G', 'C2ORF50', 'C1ORF101', 'NLRP12', 'ADCYAP1', 'ENPP6', 'SLC6A20', 'IYD', 'ZNF835', 'OTOA', 'CA3', 'SPIB', 'CLDN9', 'FAM95B1', 'FAM90A1', 'RYR2', 'C2CD4A', 'C1ORF95', 'PCDH9', 'LINC01550', 'CLEC3A', 'SVOPL', 'CCDC158', 'SCN2B', 'VSIG1', 'CLECL1', 'PCSK1N', 'IL20RB', 'ARC', 'CCDC65', 'TAS1R3', 'GSDMC', 'TTC16', 'AURKC', 'ZCCHC18', 'ULBP3', 'DDX11L2', 'DUOXA1', 'B3GALT5.AS1', 'ALDH8A1', 'KNDC1', 'COLCA2', 'GSTM1', 'PCYT1B', 'BPIFB2', 'MYOZ1', 'PDE1C', 'CRYGS', 'PPP1R36', 'TARP', 'KLHL4', 'LOC148709', 'LUZP2', 'LOC441455', 'JPH3', 'CPEB1', 'IL22RA1', 'HOXD3', 'FAM57B', 'LOC90768', 'CAMP', 'OR7E91P', 'FLJ37201', 'RIMS1', 'IL12RB2', 'RELN', 'LBX2', 'FUT7', 'SCARA5', 'PLA2G5', 'KCNE1', 'IGSF5', 'TUBB8', 'HIST1H2BN', 'GPR18', 'ZBED3.AS1', 'SLC22A18AS', 'HOXB13', 'CD177', 'ZC3H12D', 'MNX1', 'ASTN1', 'CIDEA', 'TCHH', 'ONECUT2', 'C10ORF128', 'GAL', 'SP5', 'WDR72', 'CHRNA6', 'KCNE2', 'IRX4', 'FAM135B', 'BTBD8', 'SLC16A10', 'RSPH4A', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'MGC16142', 'CCDC7', 'DCSTAMP', 'CELF5', 'GRIN2C', 'MGAT5B', 'GBP1P1', 'CXXC4', 'YPEL4', 'GPR3', 'CXCR5', 'HOXA11', 'SLC30A2', 'OBP2B', 'SLC35F1', 'ATP13A5', 'NIPAL1', 'PYDC1', 'SKIDA1', 'CCDC153', 'RPGRIP1', 'SRL', 'STRC', 'WT1', 'TNFRSF9', 'LRP1B', 'PCSK9', 'PCAT18', 'FOXJ1', 'SLC18A2', 'PPP4R4', 'NOXO1', 'PCK1', 'INSM1', 'CNNM1', 'GPR174', 'MARCO', 'SLC25A53', 'C17ORF104', 'FOXD4', 'DMRT3', 'GPX2', 'INHA', 'COL23A1', 'NOS2', 'ADH1C', 'FOXD1', 'PKNOX2', 'KLHL14', 'BTLA', 'CRISP3', 'LBP', 'IL20', 'TNFRSF17', 'AVPR2', 'GLOD5', 'MYBPC1', 'PARP15', 'CXCL2', 'GPLD1', 'PFN1P2', 'CST9', 'GPR55', 'SLCO4C1', 'SLC23A1', 'STEAP1B', 'C2ORF40', 'BCL2L14', 'DHRS4L1', 'SCN3A', 'AMH', 'ULBP2', 'CXCR2P1', 'VAT1L', 'ZNF98', 'VSIG2', 'RNF212', 'VGLL1', 'HAP1', 'CYSLTR2', 'ZNF454', 'TPSG1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'ORM1', 'ZNF488', 'TMEM105', 'FAM178B', 'P2RX1', 'DKK1', 'DPY19L2P2', 'IL23A', 'SIGLEC17P', 'CRYM', 'PRKG2', 'CXCL1', 'AMBP', 'BRINP1', 'CTCFL', 'SUCNR1', 'DEPDC4', 'FABP7', 'SPDYE1', 'LRRC2', 'GPBAR1', 'XIRP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'FUT6', 'RERGL', 'BDKRB1', 'TENM1', 'LINC00930', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'NUGGC', 'KIAA0319', 'CECR2', 'SORCS1', 'ABHD11.AS1', 'PCDHGA3', 'PKD1L1', 'FAM184B', 'ECEL1', 'CBLN2', 'WSCD2', 'SPESP1', 'SEC14L5', 'SSUH2', 'FSCN2', 'DMRT2', 'FAM162B', 'CCL17', 'ZNF732', 'HOXD4', 'PIANP', 'TMEM217', 'GRIA3', 'CTSG', 'GNB3', 'RSPO1', 'RGS6', 'COL2A1', 'SERPINA6', 'MT1A', 'ADAMTS19', 'IL1R2', 'RNF175', 'CHRNB2', 'ADAM32', 'FLJ12825', 'RASL10A', 'PFKFB1', 'POM121L9P', 'HECTD2.AS1', 'DIRC3', 'PRSS21', 'SMIM5', 'CYP46A1', 'LRRC16B', 'CAPN11', 'IGF2BP3', 'VIPR2', 'TRAT1', 'ZNF804A', 'TBX21', 'HIST1H2BE', 'GPR87', 'LOC100126784', 'CYSRT1', 'PART1', 'FOXC2', 'HOGA1', 'EMX1', 'CA9', 'ZSCAN1', 'HTR7', 'CEP83.AS1', 'SLC13A2', 'XKR9', 'WIPF3', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'OTUD7A', 'CITED1', 'ZBTB16', 'CYP26A1', 'TMEM40', 'TMSB15A', 'PVALB', 'ANKK1', 'WFDC3', 'MAPT.IT1', 'ROPN1L', 'MYO3B', 'GZMM', 'CDHR1', 'FIRRE', 'M1AP', 'MRAP2', 'INE2', 'RFX8', 'TTC23L', 'IGSF22', 'CRTAC1', 'RBM12B.AS1', 'SPAG17', 'MROH7', 'KCNT2', 'PYGM', 'PCDHA12', 'CFAP61', 'BTC', 'HEATR4', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'NWD1', 'CLEC4E', 'LRRC4B', 'SRSF12', 'B3GAT1', 'CCBE1', 'OPCML', 'ADGRF1', 'MIA', 'LINC00173', 'TMEM59L', 'CIDEC', 'HPDL', 'NLRP7', 'RNF182', 'FRMPD1', 'SMC1B', 'KCNA6', 'KLK6', 'ABCC6P2', 'FASLG', 'IL11', 'LOC613037', 'LSAMP', 'GALNT13', 'TSPAN8', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'C15ORF56', 'FAM83A', 'COL28A1', 'PSORS1C1', 'ANO5', 'SLC6A14', 'SLC16A11', 'PTCHD1', 'TMPRSS4', 'C9ORF47', 'ADGRG2', 'SLC24A5', 'TUSC5', 'CYP4F12', 'LOC100133669', 'RUFY4', 'LINC00908', 'KCNQ3', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'VENTX', 'NBPF4', 'MYOM2', 'FAM157A', 'EBF2', 'MAG', 'DSCAML1', 'PTPRN', 'PCDHA5', 'KLK7', 'CCNI2', 'CDKN2B.AS1', 'SYT6', 'DLX2', 'SFTPA2', 'ZBTB20', 'NKX3.2', 'DLX5', 'FAM19A2', 'PLAC1', 'BRE.AS1', 'CNTN2', 'OR2W3', 'SLC6A17', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'TFAP2E', 'CD160', 'ABCD2', 'CD1A', 'GRIA2', 'CCDC144A', 'DEFB1', 'RGS9', 'CACNA1I', 'GGT3P', 'DLK2', 'MYO16', 'PWAR5', 'CDKL2', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CABP4', 'CHRNA10', 'TCEAL2', 'UNC13A', 'FKBP1AP1', 'LY6H', 'AGBL4', 'SLC39A2', 'XCL2', 'TUBAL3', 'S100A7', 'SPAG8', 'PCBP3', 'MPL', 'KCNH3', 'LINC00202.1', 'ARL9', 'TM6SF2', 'ZNF727', 'GRID2IP', 'P2RY12', 'MAK', 'TCN1', 'HRCT1', 'SNORD116.4', 'ELOVL3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'GPM6A', 'CD70', 'SYCE3', 'SYCE2', 'PGLYRP2', 'TIGD4', 'GRIN2A', 'JAKMIP1', 'ARMC3', 'BAIAP2L2', 'RAB9B', 'CTAGE6', 'MKRN3', 'SOSTDC1', 'ASIC3', 'KLF3.AS1', 'LONRF3', 'AGAP7P', 'LRRC43', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'LOC400927', 'ACHE', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'HRC', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'GPR82', 'CHODL', 'CXADRP3', 'TTBK1', 'LOC285593', 'PAH', 'TTYH1', 'HIST1H2BH', 'ADGRL3', 'MLLT4.AS1', 'APOBEC3A', 'CHST9', 'GABRB3', 'SLC25A34', 'MAPK4', 'BRSK2', 'TRH', 'DNASE1L2', 'C8ORF46', 'ST8SIA2', 'CAMK4', 'DGCR5', 'EPYC', 'GBP6', 'GPR63', 'CAPSL', 'MUC15', 'ANKLE1', 'IL17D', 'SLC35F3', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'HAMP', 'MYO15A', 'RMRP', 'FAM201A', 'TNFSF11', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'RHCE', 'DCLK3', 'PTX3', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'RUNDC3A', 'ROPN1B', 'CYP2E1', 'LOC100132215', 'KCNK17', 'FOLR1', 'RRN3P1', 'UCKL1.AS1', 'LINC00961', 'C1QL3', 'PNMA6A', 'CYTL1', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'THSD7B', 'ATP13A4', 'MT1L', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'LIN7A', 'IL1RL1', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 3.830961818354533e-15 NRMSE: 5.990089622945091e-16 MAPE: 3.8567800999799555e-12 Pearson Correlation: -0.01084364907912207 Spearman Correlation: 0.04871719832211492 Coefficient of Determination: -1.840197156229955 RMSE: 0.8622444079162409 NRMSE: 0.2891884920566947 MAPE: 580.3078020298773 Predictor: ElasticNet Pearson Correlation: 0.8471834368588446 Spearman Correlation: 0.7963247303182123 Coefficient of Determination: 0.6362266461978683 RMSE: 0.3762060167242024 NRMSE: 0.05882355042204712 MAPE: 193.95632091237925 Pearson Correlation: 0.18054840314656878 Spearman Correlation: 0.19196175982830946 Coefficient of Determination: -0.12826523264004064 RMSE: 0.5434526929228255 NRMSE: 0.18226881302751058 MAPE: 670.3225914352947 Predictor: RandomForests Pearson Correlation: 0.5189252923336548 Spearman Correlation: 0.49166893203191325 Coefficient of Determination: 0.16115152444759318 RMSE: 0.5712839919544019 NRMSE: 0.08932593103813649 MAPE: 302.0310943353992 Pearson Correlation: 0.27900649386560294 Spearman Correlation: 0.29515169251780315 Coefficient of Determination: 0.07369948693491413 RMSE: 0.49241593044495674 NRMSE: 0.16515157313018405 MAPE: 285.29853641107985 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'IQUB', 'LINC01119', 'CBLN4', 'NKPD1', 'LINC01341', 'SOX8', 'EYS', 'ECT2L', 'PAX2', 'FXYD1', 'PPP1R3G', 'RNF138P1', 'CCR8', 'CCIN', 'MYCBPAP', 'XPNPEP2', 'ETV2', 'TEKT3', 'STKLD1', 'SLC30A8', 'C19ORF18', 'UGT8', 'SLC28A3', 'JPH4', 'UBE2Q2P1', 'METTL7B', 'SLC25A18', 'HEPACAM2', 'CASQ1', 'PLP1', 'TEX14', 'IDI2.AS1', 'S100A3', 'GLIS1', 'SGK2', 'ZNF843', 'LRIT3', 'CCDC36', 'NR1I3', 'LINC00482', 'ALOXE3', 'CACNG1', 'WNT2B', 'MS4A15', 'PBX4', 'ZIC2', 'ST6GALNAC1', 'GTSE1.AS1', 'ADAMTS8', 'PYGO1', 'LGALS2', 'TMEM92', 'FUT9', 'FCRL6', 'CCDC151', 'C9ORF43', 'PITX2', 'BCHE', 'PNCK', 'TNNI3K', 'AOC2', 'GJB1', 'DQX1', 'CKMT2', 'LPAR3', 'FAM189A1', 'ABCA17P', 'CACNA1G', 'C2ORF50', 'C1ORF101', 'NLRP12', 'ADCYAP1', 'ENPP6', 'SLC6A20', 'IYD', 'ZNF835', 'OTOA', 'CA3', 'SPIB', 'CLDN9', 'FAM95B1', 'FAM90A1', 'RYR2', 'C2CD4A', 'C1ORF95', 'PCDH9', 'LINC01550', 'CLEC3A', 'SVOPL', 'CCDC158', 'SCN2B', 'VSIG1', 'CLECL1', 'PCSK1N', 'IL20RB', 'ARC', 'CCDC65', 'TAS1R3', 'GSDMC', 'TTC16', 'AURKC', 'ZCCHC18', 'ULBP3', 'DDX11L2', 'DUOXA1', 'B3GALT5.AS1', 'ALDH8A1', 'KNDC1', 'COLCA2', 'GSTM1', 'PCYT1B', 'BPIFB2', 'MYOZ1', 'PDE1C', 'CRYGS', 'PPP1R36', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.8510790841613144 Spearman Correlation: 0.8245568375664047 Coefficient of Determination: 0.7243356074968621 RMSE: 0.10255263526558123 NRMSE: 0.06606708665845143 MAPE: 231.8499076264368 Pearson Correlation: -0.01151489890010136 Spearman Correlation: 0.011872012486586675 Coefficient of Determination: -1.929762918330399 RMSE: 0.33067079079157974 NRMSE: 0.22383001143385683 MAPE: 595.6253065502059 Predictor: ElasticNet Pearson Correlation: 0.4472379834496676 Spearman Correlation: 0.43447079216832557 Coefficient of Determination: 0.14901935254150556 RMSE: 0.18018404431280205 NRMSE: 0.11607926836063912 MAPE: 149.89718823490338 Pearson Correlation: 0.2624202970195912 Spearman Correlation: 0.2640474100087797 Coefficient of Determination: 0.05312566790856421 RMSE: 0.18798611253425931 NRMSE: 0.12724720443926496 MAPE: 139.5227063195939 Predictor: RandomForests Pearson Correlation: 0.46559522285457366 Spearman Correlation: 0.4460403517634643 Coefficient of Determination: 0.1322991366640207 RMSE: 0.18194557740783773 NRMSE: 0.11721409399764068 MAPE: 137.2141714898507 Pearson Correlation: 0.2400867904504081 Spearman Correlation: 0.23804506877377818 Coefficient of Determination: 0.03782591231476362 RMSE: 0.1894987822265651 NRMSE: 0.1282711257651067 MAPE: 139.16841379497714 Protein: CDKN2A x_train_column_count: 615 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'IQUB', 'LINC01119', 'CBLN4', 'NKPD1', 'LINC01341', 'SOX8', 'EYS', 'ECT2L', 'PAX2', 'FXYD1', 'PPP1R3G', 'RNF138P1', 'CCR8', 'CCIN', 'MYCBPAP', 'XPNPEP2', 'ETV2', 'TEKT3', 'STKLD1', 'SLC30A8', 'C19ORF18', 'UGT8', 'SLC28A3', 'JPH4', 'UBE2Q2P1', 'METTL7B', 'SLC25A18', 'HEPACAM2', 'CASQ1', 'PLP1', 'TEX14', 'IDI2.AS1', 'S100A3', 'GLIS1', 'SGK2', 'ZNF843', 'LRIT3', 'CCDC36', 'NR1I3', 'LINC00482', 'ALOXE3', 'CACNG1', 'WNT2B', 'MS4A15', 'PBX4', 'ZIC2', 'ST6GALNAC1', 'GTSE1.AS1', 'ADAMTS8', 'PYGO1', 'LGALS2', 'TMEM92', 'FUT9', 'FCRL6', 'CCDC151', 'C9ORF43', 'PITX2', 'BCHE', 'PNCK', 'TNNI3K', 'AOC2', 'GJB1', 'DQX1', 'CKMT2', 'LPAR3', 'FAM189A1', 'ABCA17P', 'CACNA1G', 'C2ORF50', 'C1ORF101', 'NLRP12', 'ADCYAP1', 'ENPP6', 'SLC6A20', 'IYD', 'ZNF835', 'OTOA', 'CA3', 'SPIB', 'CLDN9', 'FAM95B1', 'FAM90A1', 'RYR2', 'C2CD4A', 'C1ORF95', 'PCDH9', 'LINC01550', 'CLEC3A', 'SVOPL', 'CCDC158', 'SCN2B', 'VSIG1', 'CLECL1', 'PCSK1N', 'IL20RB', 'ARC', 'CCDC65', 'TAS1R3', 'GSDMC', 'TTC16', 'AURKC', 'ZCCHC18', 'ULBP3', 'DDX11L2', 'DUOXA1', 'B3GALT5.AS1', 'ALDH8A1', 'KNDC1', 'COLCA2', 'GSTM1', 'PCYT1B', 'BPIFB2', 'MYOZ1', 'PDE1C', 'CRYGS', 'PPP1R36', 'TARP', 'KLHL4', 'LOC148709', 'LUZP2', 'LOC441455', 'JPH3', 'CPEB1', 'IL22RA1', 'HOXD3', 'FAM57B', 'LOC90768', 'CAMP', 'OR7E91P', 'FLJ37201', 'RIMS1', 'IL12RB2', 'RELN', 'LBX2', 'FUT7', 'SCARA5', 'PLA2G5', 'KCNE1', 'IGSF5', 'TUBB8', 'HIST1H2BN', 'GPR18', 'ZBED3.AS1', 'SLC22A18AS', 'HOXB13', 'CD177', 'ZC3H12D', 'MNX1', 'ASTN1', 'CIDEA', 'TCHH', 'ONECUT2', 'C10ORF128', 'GAL', 'SP5', 'WDR72', 'CHRNA6', 'KCNE2', 'IRX4', 'FAM135B', 'BTBD8', 'SLC16A10', 'RSPH4A', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'MGC16142', 'CCDC7', 'DCSTAMP', 'CELF5', 'GRIN2C', 'MGAT5B', 'GBP1P1', 'CXXC4', 'YPEL4', 'GPR3', 'CXCR5', 'HOXA11', 'SLC30A2', 'OBP2B', 'SLC35F1', 'ATP13A5', 'NIPAL1', 'PYDC1', 'SKIDA1', 'CCDC153', 'RPGRIP1', 'SRL', 'STRC', 'WT1', 'TNFRSF9', 'LRP1B', 'PCSK9', 'PCAT18', 'FOXJ1', 'SLC18A2', 'PPP4R4', 'NOXO1', 'PCK1', 'INSM1', 'CNNM1', 'GPR174', 'MARCO', 'SLC25A53', 'C17ORF104', 'FOXD4', 'DMRT3', 'GPX2', 'INHA', 'COL23A1', 'NOS2', 'ADH1C', 'FOXD1', 'PKNOX2', 'KLHL14', 'BTLA', 'CRISP3', 'LBP', 'IL20', 'TNFRSF17', 'AVPR2', 'GLOD5', 'MYBPC1', 'PARP15', 'CXCL2', 'GPLD1', 'PFN1P2', 'CST9', 'GPR55', 'SLCO4C1', 'SLC23A1', 'STEAP1B', 'C2ORF40', 'BCL2L14', 'DHRS4L1', 'SCN3A', 'AMH', 'ULBP2', 'CXCR2P1', 'VAT1L', 'ZNF98', 'VSIG2', 'RNF212', 'VGLL1', 'HAP1', 'CYSLTR2', 'ZNF454', 'TPSG1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'ORM1', 'ZNF488', 'TMEM105', 'FAM178B', 'P2RX1', 'DKK1', 'DPY19L2P2', 'IL23A', 'SIGLEC17P', 'CRYM', 'PRKG2', 'CXCL1', 'AMBP', 'BRINP1', 'CTCFL', 'SUCNR1', 'DEPDC4', 'FABP7', 'SPDYE1', 'LRRC2', 'GPBAR1', 'XIRP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'FUT6', 'RERGL', 'BDKRB1', 'TENM1', 'LINC00930', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'NUGGC', 'KIAA0319', 'CECR2', 'SORCS1', 'ABHD11.AS1', 'PCDHGA3', 'PKD1L1', 'FAM184B', 'ECEL1', 'CBLN2', 'WSCD2', 'SPESP1', 'SEC14L5', 'SSUH2', 'FSCN2', 'DMRT2', 'FAM162B', 'CCL17', 'ZNF732', 'HOXD4', 'PIANP', 'TMEM217', 'GRIA3', 'CTSG', 'GNB3', 'RSPO1', 'RGS6', 'COL2A1', 'SERPINA6', 'MT1A', 'ADAMTS19', 'IL1R2', 'RNF175', 'CHRNB2', 'ADAM32', 'FLJ12825', 'RASL10A', 'PFKFB1', 'POM121L9P', 'HECTD2.AS1', 'DIRC3', 'PRSS21', 'SMIM5', 'CYP46A1', 'LRRC16B', 'CAPN11', 'IGF2BP3', 'VIPR2', 'TRAT1', 'ZNF804A', 'TBX21', 'HIST1H2BE', 'GPR87', 'LOC100126784', 'CYSRT1', 'PART1', 'FOXC2', 'HOGA1', 'EMX1', 'CA9', 'ZSCAN1', 'HTR7', 'CEP83.AS1', 'SLC13A2', 'XKR9', 'WIPF3', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'OTUD7A', 'CITED1', 'ZBTB16', 'CYP26A1', 'TMEM40', 'TMSB15A', 'PVALB', 'ANKK1', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 6.435542888919143e-15 NRMSE: 1.4548531454547625e-15 MAPE: 5.715748745558088e-12 Pearson Correlation: 0.11201011840782447 Spearman Correlation: 0.09813676714466883 Coefficient of Determination: -2.526557075555152 RMSE: 1.2646472642245772 NRMSE: 0.34164881786918555 MAPE: 478.9543039886234 Predictor: ElasticNet Pearson Correlation: 0.8284694837862003 Spearman Correlation: 0.7969220428149381 Coefficient of Determination: 0.6330535874662055 RMSE: 0.40182854547114055 NRMSE: 0.09083950389310286 MAPE: 437.39724954731923 Pearson Correlation: 0.3826008240645536 Spearman Correlation: 0.333167495854063 Coefficient of Determination: 0.09305478195713512 RMSE: 0.6413343153319709 NRMSE: 0.17325867606763856 MAPE: 193.00740526422234 Predictor: RandomForests Pearson Correlation: 0.5603619479451764 Spearman Correlation: 0.502260224908148 Coefficient of Determination: 0.22868413048644676 RMSE: 0.5825800328556408 NRMSE: 0.1317011490574524 MAPE: 295.82969538371816 Pearson Correlation: 0.3437613945220933 Spearman Correlation: 0.3409960003902059 Coefficient of Determination: 0.10296381927517861 RMSE: 0.6378211707217067 NRMSE: 0.1723095879408112 MAPE: 169.80013652215104 Protein: TP53 x_train_column_count: 1002 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'IQUB', 'LINC01119', 'CBLN4', 'NKPD1', 'LINC01341', 'SOX8', 'EYS', 'ECT2L', 'PAX2', 'FXYD1', 'PPP1R3G', 'RNF138P1', 'CCR8', 'CCIN', 'MYCBPAP', 'XPNPEP2', 'ETV2', 'TEKT3', 'STKLD1', 'SLC30A8', 'C19ORF18', 'UGT8', 'SLC28A3', 'JPH4', 'UBE2Q2P1', 'METTL7B', 'SLC25A18', 'HEPACAM2', 'CASQ1', 'PLP1', 'TEX14', 'IDI2.AS1', 'S100A3', 'GLIS1', 'SGK2', 'ZNF843', 'LRIT3', 'CCDC36', 'NR1I3', 'LINC00482', 'ALOXE3', 'CACNG1', 'WNT2B', 'MS4A15', 'PBX4', 'ZIC2', 'ST6GALNAC1', 'GTSE1.AS1', 'ADAMTS8', 'PYGO1', 'LGALS2', 'TMEM92', 'FUT9', 'FCRL6', 'CCDC151', 'C9ORF43', 'PITX2', 'BCHE', 'PNCK', 'TNNI3K', 'AOC2', 'GJB1', 'DQX1', 'CKMT2', 'LPAR3', 'FAM189A1', 'ABCA17P', 'CACNA1G', 'C2ORF50', 'C1ORF101', 'NLRP12', 'ADCYAP1', 'ENPP6', 'SLC6A20', 'IYD', 'ZNF835', 'OTOA', 'CA3', 'SPIB', 'CLDN9', 'FAM95B1', 'FAM90A1', 'RYR2', 'C2CD4A', 'C1ORF95', 'PCDH9', 'LINC01550', 'CLEC3A', 'SVOPL', 'CCDC158', 'SCN2B', 'VSIG1', 'CLECL1', 'PCSK1N', 'IL20RB', 'ARC', 'CCDC65', 'TAS1R3', 'GSDMC', 'TTC16', 'AURKC', 'ZCCHC18', 'ULBP3', 'DDX11L2', 'DUOXA1', 'B3GALT5.AS1', 'ALDH8A1', 'KNDC1', 'COLCA2', 'GSTM1', 'PCYT1B', 'BPIFB2', 'MYOZ1', 'PDE1C', 'CRYGS', 'PPP1R36', 'TARP', 'KLHL4', 'LOC148709', 'LUZP2', 'LOC441455', 'JPH3', 'CPEB1', 'IL22RA1', 'HOXD3', 'FAM57B', 'LOC90768', 'CAMP', 'OR7E91P', 'FLJ37201', 'RIMS1', 'IL12RB2', 'RELN', 'LBX2', 'FUT7', 'SCARA5', 'PLA2G5', 'KCNE1', 'IGSF5', 'TUBB8', 'HIST1H2BN', 'GPR18', 'ZBED3.AS1', 'SLC22A18AS', 'HOXB13', 'CD177', 'ZC3H12D', 'MNX1', 'ASTN1', 'CIDEA', 'TCHH', 'ONECUT2', 'C10ORF128', 'GAL', 'SP5', 'WDR72', 'CHRNA6', 'KCNE2', 'IRX4', 'FAM135B', 'BTBD8', 'SLC16A10', 'RSPH4A', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'MGC16142', 'CCDC7', 'DCSTAMP', 'CELF5', 'GRIN2C', 'MGAT5B', 'GBP1P1', 'CXXC4', 'YPEL4', 'GPR3', 'CXCR5', 'HOXA11', 'SLC30A2', 'OBP2B', 'SLC35F1', 'ATP13A5', 'NIPAL1', 'PYDC1', 'SKIDA1', 'CCDC153', 'RPGRIP1', 'SRL', 'STRC', 'WT1', 'TNFRSF9', 'LRP1B', 'PCSK9', 'PCAT18', 'FOXJ1', 'SLC18A2', 'PPP4R4', 'NOXO1', 'PCK1', 'INSM1', 'CNNM1', 'GPR174', 'MARCO', 'SLC25A53', 'C17ORF104', 'FOXD4', 'DMRT3', 'GPX2', 'INHA', 'COL23A1', 'NOS2', 'ADH1C', 'FOXD1', 'PKNOX2', 'KLHL14', 'BTLA', 'CRISP3', 'LBP', 'IL20', 'TNFRSF17', 'AVPR2', 'GLOD5', 'MYBPC1', 'PARP15', 'CXCL2', 'GPLD1', 'PFN1P2', 'CST9', 'GPR55', 'SLCO4C1', 'SLC23A1', 'STEAP1B', 'C2ORF40', 'BCL2L14', 'DHRS4L1', 'SCN3A', 'AMH', 'ULBP2', 'CXCR2P1', 'VAT1L', 'ZNF98', 'VSIG2', 'RNF212', 'VGLL1', 'HAP1', 'CYSLTR2', 'ZNF454', 'TPSG1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'ORM1', 'ZNF488', 'TMEM105', 'FAM178B', 'P2RX1', 'DKK1', 'DPY19L2P2', 'IL23A', 'SIGLEC17P', 'CRYM', 'PRKG2', 'CXCL1', 'AMBP', 'BRINP1', 'CTCFL', 'SUCNR1', 'DEPDC4', 'FABP7', 'SPDYE1', 'LRRC2', 'GPBAR1', 'XIRP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'FUT6', 'RERGL', 'BDKRB1', 'TENM1', 'LINC00930', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'NUGGC', 'KIAA0319', 'CECR2', 'SORCS1', 'ABHD11.AS1', 'PCDHGA3', 'PKD1L1', 'FAM184B', 'ECEL1', 'CBLN2', 'WSCD2', 'SPESP1', 'SEC14L5', 'SSUH2', 'FSCN2', 'DMRT2', 'FAM162B', 'CCL17', 'ZNF732', 'HOXD4', 'PIANP', 'TMEM217', 'GRIA3', 'CTSG', 'GNB3', 'RSPO1', 'RGS6', 'COL2A1', 'SERPINA6', 'MT1A', 'ADAMTS19', 'IL1R2', 'RNF175', 'CHRNB2', 'ADAM32', 'FLJ12825', 'RASL10A', 'PFKFB1', 'POM121L9P', 'HECTD2.AS1', 'DIRC3', 'PRSS21', 'SMIM5', 'CYP46A1', 'LRRC16B', 'CAPN11', 'IGF2BP3', 'VIPR2', 'TRAT1', 'ZNF804A', 'TBX21', 'HIST1H2BE', 'GPR87', 'LOC100126784', 'CYSRT1', 'PART1', 'FOXC2', 'HOGA1', 'EMX1', 'CA9', 'ZSCAN1', 'HTR7', 'CEP83.AS1', 'SLC13A2', 'XKR9', 'WIPF3', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'OTUD7A', 'CITED1', 'ZBTB16', 'CYP26A1', 'TMEM40', 'TMSB15A', 'PVALB', 'ANKK1', 'WFDC3', 'MAPT.IT1', 'ROPN1L', 'MYO3B', 'GZMM', 'CDHR1', 'FIRRE', 'M1AP', 'MRAP2', 'INE2', 'RFX8', 'TTC23L', 'IGSF22', 'CRTAC1', 'RBM12B.AS1', 'SPAG17', 'MROH7', 'KCNT2', 'PYGM', 'PCDHA12', 'CFAP61', 'BTC', 'HEATR4', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'NWD1', 'CLEC4E', 'LRRC4B', 'SRSF12', 'B3GAT1', 'CCBE1', 'OPCML', 'ADGRF1', 'MIA', 'LINC00173', 'TMEM59L', 'CIDEC', 'HPDL', 'NLRP7', 'RNF182', 'FRMPD1', 'SMC1B', 'KCNA6', 'KLK6', 'ABCC6P2', 'FASLG', 'IL11', 'LOC613037', 'LSAMP', 'GALNT13', 'TSPAN8', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'C15ORF56', 'FAM83A', 'COL28A1', 'PSORS1C1', 'ANO5', 'SLC6A14', 'SLC16A11', 'PTCHD1', 'TMPRSS4', 'C9ORF47', 'ADGRG2', 'SLC24A5', 'TUSC5', 'CYP4F12', 'LOC100133669', 'RUFY4', 'LINC00908', 'KCNQ3', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'VENTX', 'NBPF4', 'MYOM2', 'FAM157A', 'EBF2', 'MAG', 'DSCAML1', 'PTPRN', 'PCDHA5', 'KLK7', 'CCNI2', 'CDKN2B.AS1', 'SYT6', 'DLX2', 'SFTPA2', 'ZBTB20', 'NKX3.2', 'DLX5', 'FAM19A2', 'PLAC1', 'BRE.AS1', 'CNTN2', 'OR2W3', 'SLC6A17', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'TFAP2E', 'CD160', 'ABCD2', 'CD1A', 'GRIA2', 'CCDC144A', 'DEFB1', 'RGS9', 'CACNA1I', 'GGT3P', 'DLK2', 'MYO16', 'PWAR5', 'CDKL2', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CABP4', 'CHRNA10', 'TCEAL2', 'UNC13A', 'FKBP1AP1', 'LY6H', 'AGBL4', 'SLC39A2', 'XCL2', 'TUBAL3', 'S100A7', 'SPAG8', 'PCBP3', 'MPL', 'KCNH3', 'LINC00202.1', 'ARL9', 'TM6SF2', 'ZNF727', 'GRID2IP', 'P2RY12', 'MAK', 'TCN1', 'HRCT1', 'SNORD116.4', 'ELOVL3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'GPM6A', 'CD70', 'SYCE3', 'SYCE2', 'PGLYRP2', 'TIGD4', 'GRIN2A', 'JAKMIP1', 'ARMC3', 'BAIAP2L2', 'RAB9B', 'CTAGE6', 'MKRN3', 'SOSTDC1', 'ASIC3', 'KLF3.AS1', 'LONRF3', 'AGAP7P', 'LRRC43', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'LOC400927', 'ACHE', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'HRC', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'GPR82', 'CHODL', 'CXADRP3', 'TTBK1', 'LOC285593', 'PAH', 'TTYH1', 'HIST1H2BH', 'ADGRL3', 'MLLT4.AS1', 'APOBEC3A', 'CHST9', 'GABRB3', 'SLC25A34', 'MAPK4', 'BRSK2', 'TRH', 'DNASE1L2', 'C8ORF46', 'ST8SIA2', 'CAMK4', 'DGCR5', 'EPYC', 'GBP6', 'GPR63', 'CAPSL', 'MUC15', 'ANKLE1', 'IL17D', 'SLC35F3', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'HAMP', 'MYO15A', 'RMRP', 'FAM201A', 'TNFSF11', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'RHCE', 'DCLK3', 'PTX3', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'RUNDC3A', 'ROPN1B', 'CYP2E1', 'LOC100132215', 'KCNK17', 'FOLR1', 'RRN3P1', 'UCKL1.AS1', 'LINC00961', 'C1QL3', 'PNMA6A', 'CYTL1', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'THSD7B', 'ATP13A4', 'MT1L', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'LIN7A', 'IL1RL1', 'CCR10', 'KISS1R', 'TMEM150B', 'ZMAT4', 'IL24', 'KIF19', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'DPEP1', 'TTLL9', 'WBP2NL', 'A2ML1', 'NIPAL4', 'PRRT4', 'RHBG', 'GPR135', 'KIAA1210', 'LOC90246', 'CNTNAP3', 'RRAD', 'CD300LB', 'PCDHB18P', 'CBLN1', 'B3GALT5', 'GNMT', 'FIGF', 'OXGR1', 'DPF3', 'IL18RAP', 'MAP7D2', 'SLC5A8', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'LRRC24', 'AIM2', 'RAB39A', 'TRIM7', 'PCDH20', 'GABRB2', 'FOXN1', 'TIFAB', 'PHKG1', 'PON3', 'DNAH11', 'MASP2', 'KLK8', 'WFIKKN1', 'CD19', 'CRB2', 'GPR171', 'FREM2', 'DCST2', 'WNT10A', 'LINC00669', 'C19ORF45', 'CLCA2', 'ANK1', 'SLC26A3', 'KCNB1', 'SEPHS1P1', 'HIST1H2AG', 'LINC01465', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'NEURL3', 'RIC3', 'COLCA1', 'CD1E', 'HNRNPCL3', 'TTC41P', 'ANO2', 'MED12L', 'LOC646999', 'CST2', 'PCDHGC5', 'EYA1', 'NRXN1', 'RAB3B', 'MYEOV', 'FAM182B', 'IL6', 'SEC14L1P1', 'CLPSL1', 'STXBP6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'LPAR4', 'CXCR2', 'KIF4B', 'MSLN', 'CR2', 'FNDC8', 'AJAP1', 'CLDN14', 'PATL2', 'TDRD9', 'ZNF676', 'CLEC4F', 'KCNRG', 'C9ORF117', 'FAM43B', 'HAPLN1', 'ABHD1', 'MAGEL2', 'NDP', 'VIT', 'TRABD2A', 'PDCD1', 'TSPAN32', 'MKX', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.7846443925219112e-15 NRMSE: 7.45853593818645e-16 MAPE: 4.5063172407057366e-12 Pearson Correlation: 0.268250532975855 Spearman Correlation: 0.2562774363476734 Coefficient of Determination: -0.91634596265457 RMSE: 0.5667183527463802 NRMSE: 0.18663538703980903 MAPE: 2521.360947928638 Predictor: ElasticNet Pearson Correlation: 0.8059754442137206 Spearman Correlation: 0.744585494430795 Coefficient of Determination: 0.5910094000562449 RMSE: 0.29118942491487215 NRMSE: 0.07799368552695116 MAPE: 347.08470541085444 Pearson Correlation: 0.406790987019494 Spearman Correlation: 0.372997756316457 Coefficient of Determination: 0.11275423093176151 RMSE: 0.38561355138908865 NRMSE: 0.12699277174019055 MAPE: 3283.1657884932433 Predictor: RandomForests Pearson Correlation: 0.5025080028834915 Spearman Correlation: 0.5278915513582496 Coefficient of Determination: 0.2386702534948556 RMSE: 0.3972878969764269 NRMSE: 0.10641165045571901 MAPE: 363.7120656871787 Pearson Correlation: 0.3479156615047917 Spearman Correlation: 0.3615842356843235 Coefficient of Determination: 0.10667526723508303 RMSE: 0.3869323118471989 NRMSE: 0.12742707454213695 MAPE: 2509.610197345597 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'IQUB', 'LINC01119', 'CBLN4', 'NKPD1', 'LINC01341', 'SOX8', 'EYS', 'ECT2L', 'PAX2', 'FXYD1', 'PPP1R3G', 'RNF138P1', 'CCR8', 'CCIN', 'MYCBPAP', 'XPNPEP2', 'ETV2', 'TEKT3', 'STKLD1', 'SLC30A8', 'C19ORF18', 'UGT8', 'SLC28A3', 'JPH4', 'UBE2Q2P1', 'METTL7B', 'SLC25A18', 'HEPACAM2', 'CASQ1', 'PLP1', 'TEX14', 'IDI2.AS1', 'S100A3', 'GLIS1', 'SGK2', 'ZNF843', 'LRIT3', 'CCDC36', 'NR1I3', 'LINC00482', 'ALOXE3', 'CACNG1', 'WNT2B', 'MS4A15', 'PBX4', 'ZIC2', 'ST6GALNAC1', 'GTSE1.AS1', 'ADAMTS8', 'PYGO1', 'LGALS2', 'TMEM92', 'FUT9', 'FCRL6', 'CCDC151', 'C9ORF43', 'PITX2', 'BCHE', 'PNCK', 'TNNI3K', 'AOC2', 'GJB1', 'DQX1', 'CKMT2', 'LPAR3', 'FAM189A1', 'ABCA17P', 'CACNA1G', 'C2ORF50', 'C1ORF101', 'NLRP12', 'ADCYAP1', 'ENPP6', 'SLC6A20', 'IYD', 'ZNF835', 'OTOA', 'CA3', 'SPIB', 'CLDN9', 'FAM95B1', 'FAM90A1', 'RYR2', 'C2CD4A', 'C1ORF95', 'PCDH9', 'LINC01550', 'CLEC3A', 'SVOPL', 'CCDC158', 'SCN2B', 'VSIG1', 'CLECL1', 'PCSK1N', 'IL20RB', 'ARC', 'CCDC65', 'TAS1R3', 'GSDMC', 'TTC16', 'AURKC', 'ZCCHC18', 'ULBP3', 'DDX11L2', 'DUOXA1', 'B3GALT5.AS1', 'ALDH8A1', 'KNDC1', 'COLCA2', 'GSTM1', 'PCYT1B', 'BPIFB2', 'MYOZ1', 'PDE1C', 'CRYGS', 'PPP1R36', 'TARP', 'KLHL4', 'LOC148709', 'LUZP2', 'LOC441455', 'JPH3', 'CPEB1', 'IL22RA1', 'HOXD3', 'FAM57B', 'LOC90768', 'CAMP', 'OR7E91P', 'FLJ37201', 'RIMS1', 'IL12RB2', 'RELN', 'LBX2', 'FUT7', 'SCARA5', 'PLA2G5', 'KCNE1', 'IGSF5', 'TUBB8', 'HIST1H2BN', 'GPR18', 'ZBED3.AS1', 'SLC22A18AS', 'HOXB13', 'CD177', 'ZC3H12D', 'MNX1', 'ASTN1', 'CIDEA', 'TCHH', 'ONECUT2', 'C10ORF128', 'GAL', 'SP5', 'WDR72', 'CHRNA6', 'KCNE2', 'IRX4', 'FAM135B', 'BTBD8', 'SLC16A10', 'RSPH4A', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'MGC16142', 'CCDC7', 'DCSTAMP', 'CELF5', 'GRIN2C', 'MGAT5B', 'GBP1P1', 'CXXC4', 'YPEL4', 'GPR3', 'CXCR5', 'HOXA11', 'SLC30A2', 'OBP2B', 'SLC35F1', 'ATP13A5', 'NIPAL1', 'PYDC1', 'SKIDA1', 'CCDC153', 'RPGRIP1', 'SRL', 'STRC', 'WT1', 'TNFRSF9', 'LRP1B', 'PCSK9', 'PCAT18', 'FOXJ1', 'SLC18A2', 'PPP4R4', 'NOXO1', 'PCK1', 'INSM1', 'CNNM1', 'GPR174', 'MARCO', 'SLC25A53', 'C17ORF104', 'FOXD4', 'DMRT3', 'GPX2', 'INHA', 'COL23A1', 'NOS2', 'ADH1C', 'FOXD1', 'PKNOX2', 'KLHL14', 'BTLA', 'CRISP3', 'LBP', 'IL20', 'TNFRSF17', 'AVPR2', 'GLOD5', 'MYBPC1', 'PARP15', 'CXCL2', 'GPLD1', 'PFN1P2', 'CST9', 'GPR55', 'SLCO4C1', 'SLC23A1', 'STEAP1B', 'C2ORF40', 'BCL2L14', 'DHRS4L1', 'SCN3A', 'AMH', 'ULBP2', 'CXCR2P1', 'VAT1L', 'ZNF98', 'VSIG2', 'RNF212', 'VGLL1', 'HAP1', 'CYSLTR2', 'ZNF454', 'TPSG1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'ORM1', 'ZNF488', 'TMEM105', 'FAM178B', 'P2RX1', 'DKK1', 'DPY19L2P2', 'IL23A', 'SIGLEC17P', 'CRYM', 'PRKG2', 'CXCL1', 'AMBP', 'BRINP1', 'CTCFL', 'SUCNR1', 'DEPDC4', 'FABP7', 'SPDYE1', 'LRRC2', 'GPBAR1', 'XIRP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'FUT6', 'RERGL', 'BDKRB1', 'TENM1', 'LINC00930', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'NUGGC', 'KIAA0319', 'CECR2', 'SORCS1', 'ABHD11.AS1', 'PCDHGA3', 'PKD1L1', 'FAM184B', 'ECEL1', 'CBLN2', 'WSCD2', 'SPESP1', 'SEC14L5', 'SSUH2', 'FSCN2', 'DMRT2', 'FAM162B', 'CCL17', 'ZNF732', 'HOXD4', 'PIANP', 'TMEM217', 'GRIA3', 'CTSG', 'GNB3', 'RSPO1', 'RGS6', 'COL2A1', 'SERPINA6', 'MT1A', 'ADAMTS19', 'IL1R2', 'RNF175', 'CHRNB2', 'ADAM32', 'FLJ12825', 'RASL10A', 'PFKFB1', 'POM121L9P', 'HECTD2.AS1', 'DIRC3', 'PRSS21', 'SMIM5', 'CYP46A1', 'LRRC16B', 'CAPN11', 'IGF2BP3', 'VIPR2', 'TRAT1', 'ZNF804A', 'TBX21', 'HIST1H2BE', 'GPR87', 'LOC100126784', 'CYSRT1', 'PART1', 'FOXC2', 'HOGA1', 'EMX1', 'CA9', 'ZSCAN1', 'HTR7', 'CEP83.AS1', 'SLC13A2', 'XKR9', 'WIPF3', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'OTUD7A', 'CITED1', 'ZBTB16', 'CYP26A1', 'TMEM40', 'TMSB15A', 'PVALB', 'ANKK1', 'WFDC3', 'MAPT.IT1', 'ROPN1L', 'MYO3B', 'GZMM', 'CDHR1', 'FIRRE', 'M1AP', 'MRAP2', 'INE2', 'RFX8', 'TTC23L', 'IGSF22', 'CRTAC1', 'RBM12B.AS1', 'SPAG17', 'MROH7', 'KCNT2', 'PYGM', 'PCDHA12', 'CFAP61', 'BTC', 'HEATR4', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'NWD1', 'CLEC4E', 'LRRC4B', 'SRSF12', 'B3GAT1', 'CCBE1', 'OPCML', 'ADGRF1', 'MIA', 'LINC00173', 'TMEM59L', 'CIDEC', 'HPDL', 'NLRP7', 'RNF182', 'FRMPD1', 'SMC1B', 'KCNA6', 'KLK6', 'ABCC6P2', 'FASLG', 'IL11', 'LOC613037', 'LSAMP', 'GALNT13', 'TSPAN8', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'C15ORF56', 'FAM83A', 'COL28A1', 'PSORS1C1', 'ANO5', 'SLC6A14', 'SLC16A11', 'PTCHD1', 'TMPRSS4', 'C9ORF47', 'ADGRG2', 'SLC24A5', 'TUSC5', 'CYP4F12', 'LOC100133669', 'RUFY4', 'LINC00908', 'KCNQ3', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'VENTX', 'NBPF4', 'MYOM2', 'FAM157A', 'EBF2', 'MAG', 'DSCAML1', 'PTPRN', 'PCDHA5', 'KLK7', 'CCNI2', 'CDKN2B.AS1', 'SYT6', 'DLX2', 'SFTPA2', 'ZBTB20', 'NKX3.2', 'DLX5', 'FAM19A2', 'PLAC1', 'BRE.AS1', 'CNTN2', 'OR2W3', 'SLC6A17', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'TFAP2E', 'CD160', 'ABCD2', 'CD1A', 'GRIA2', 'CCDC144A', 'DEFB1', 'RGS9', 'CACNA1I', 'GGT3P', 'DLK2', 'MYO16', 'PWAR5', 'CDKL2', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CABP4', 'CHRNA10', 'TCEAL2', 'UNC13A', 'FKBP1AP1', 'LY6H', 'AGBL4', 'SLC39A2', 'XCL2', 'TUBAL3', 'S100A7', 'SPAG8', 'PCBP3', 'MPL', 'KCNH3', 'LINC00202.1', 'ARL9', 'TM6SF2', 'ZNF727', 'GRID2IP', 'P2RY12', 'MAK', 'TCN1', 'HRCT1', 'SNORD116.4', 'ELOVL3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'GPM6A', 'CD70', 'SYCE3', 'SYCE2', 'PGLYRP2', 'TIGD4', 'GRIN2A', 'JAKMIP1', 'ARMC3', 'BAIAP2L2', 'RAB9B', 'CTAGE6', 'MKRN3', 'SOSTDC1', 'ASIC3', 'KLF3.AS1', 'LONRF3', 'AGAP7P', 'LRRC43', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'LOC400927', 'ACHE', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'HRC', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'GPR82', 'CHODL', 'CXADRP3', 'TTBK1', 'LOC285593', 'PAH', 'TTYH1', 'HIST1H2BH', 'ADGRL3', 'MLLT4.AS1', 'APOBEC3A', 'CHST9', 'GABRB3', 'SLC25A34', 'MAPK4', 'BRSK2', 'TRH', 'DNASE1L2', 'C8ORF46', 'ST8SIA2', 'CAMK4', 'DGCR5', 'EPYC', 'GBP6', 'GPR63', 'CAPSL', 'MUC15', 'ANKLE1', 'IL17D', 'SLC35F3', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'HAMP', 'MYO15A', 'RMRP', 'FAM201A', 'TNFSF11', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'RHCE', 'DCLK3', 'PTX3', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'RUNDC3A', 'ROPN1B', 'CYP2E1', 'LOC100132215', 'KCNK17', 'FOLR1', 'RRN3P1', 'UCKL1.AS1', 'LINC00961', 'C1QL3', 'PNMA6A', 'CYTL1', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'THSD7B', 'ATP13A4', 'MT1L', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'LIN7A', 'IL1RL1', 'CCR10', 'KISS1R', 'TMEM150B', 'ZMAT4', 'IL24', 'KIF19', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'DPEP1', 'TTLL9', 'WBP2NL', 'A2ML1', 'NIPAL4', 'PRRT4', 'RHBG', 'GPR135', 'KIAA1210', 'LOC90246', 'CNTNAP3', 'RRAD', 'CD300LB', 'PCDHB18P', 'CBLN1', 'B3GALT5', 'GNMT', 'FIGF', 'OXGR1', 'DPF3', 'IL18RAP', 'MAP7D2', 'SLC5A8', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'LRRC24', 'AIM2', 'RAB39A', 'TRIM7', 'PCDH20', 'GABRB2', 'FOXN1', 'TIFAB', 'PHKG1', 'PON3', 'DNAH11', 'MASP2', 'KLK8', 'WFIKKN1', 'CD19', 'CRB2', 'GPR171', 'FREM2', 'DCST2', 'WNT10A', 'LINC00669', 'C19ORF45', 'CLCA2', 'ANK1', 'SLC26A3', 'KCNB1', 'SEPHS1P1', 'HIST1H2AG', 'LINC01465', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'NEURL3', 'RIC3', 'COLCA1', 'CD1E', 'HNRNPCL3', 'TTC41P', 'ANO2', 'MED12L', 'LOC646999', 'CST2', 'PCDHGC5', 'EYA1', 'NRXN1', 'RAB3B', 'MYEOV', 'FAM182B', 'IL6', 'SEC14L1P1', 'CLPSL1', 'STXBP6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'LPAR4', 'CXCR2', 'KIF4B', 'MSLN', 'CR2', 'FNDC8', 'AJAP1', 'CLDN14', 'PATL2', 'TDRD9', 'ZNF676', 'CLEC4F', 'KCNRG', 'C9ORF117', 'FAM43B', 'HAPLN1', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 4.271556488609562e-15 NRMSE: 8.401960048405905e-16 MAPE: 7.83759723212689e-12 Pearson Correlation: 0.30541931646468723 Spearman Correlation: 0.3325821871036973 Coefficient of Determination: -0.42160436947340396 RMSE: 0.9139467867993785 NRMSE: 0.22745745173076293 MAPE: 327.4530888115843 Predictor: ElasticNet Pearson Correlation: 0.8903117519070342 Spearman Correlation: 0.8791988293821288 Coefficient of Determination: 0.7316833296666629 RMSE: 0.3755363686948514 NRMSE: 0.07386631957019107 MAPE: 250.24453335467456 Pearson Correlation: 0.3517724995677102 Spearman Correlation: 0.3625158521119891 Coefficient of Determination: 0.01795567794468156 RMSE: 0.7596212055644824 NRMSE: 0.18904985081617742 MAPE: 196.6244109952887 Predictor: RandomForests Pearson Correlation: 0.5067113811211299 Spearman Correlation: 0.5189366883782056 Coefficient of Determination: 0.2114264045742208 RMSE: 0.643797506162766 NRMSE: 0.12663208225074077 MAPE: 546.9916724669365 Pearson Correlation: 0.42051207975805166 Spearman Correlation: 0.4134816115500927 Coefficient of Determination: 0.04985827756061545 RMSE: 0.7471808457519283 NRMSE: 0.1859537706258999 MAPE: 246.98672793189013 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'IQUB', 'LINC01119', 'CBLN4', 'NKPD1', 'LINC01341', 'SOX8', 'EYS', 'ECT2L', 'PAX2', 'FXYD1', 'PPP1R3G', 'RNF138P1', 'CCR8', 'CCIN', 'MYCBPAP', 'XPNPEP2', 'ETV2', 'TEKT3', 'STKLD1', 'SLC30A8', 'C19ORF18', 'UGT8', 'SLC28A3', 'JPH4', 'UBE2Q2P1', 'METTL7B', 'SLC25A18', 'HEPACAM2', 'CASQ1', 'PLP1', 'TEX14', 'IDI2.AS1', 'S100A3', 'GLIS1', 'SGK2', 'ZNF843', 'LRIT3', 'CCDC36', 'NR1I3', 'LINC00482', 'ALOXE3', 'CACNG1', 'WNT2B', 'MS4A15', 'PBX4', 'ZIC2', 'ST6GALNAC1', 'GTSE1.AS1', 'ADAMTS8', 'PYGO1', 'LGALS2', 'TMEM92', 'FUT9', 'FCRL6', 'CCDC151', 'C9ORF43', 'PITX2', 'BCHE', 'PNCK', 'TNNI3K', 'AOC2', 'GJB1', 'DQX1', 'CKMT2', 'LPAR3', 'FAM189A1', 'ABCA17P', 'CACNA1G', 'C2ORF50', 'C1ORF101', 'NLRP12', 'ADCYAP1', 'ENPP6', 'SLC6A20', 'IYD', 'ZNF835', 'OTOA', 'CA3', 'SPIB', 'CLDN9', 'FAM95B1', 'FAM90A1', 'RYR2', 'C2CD4A', 'C1ORF95', 'PCDH9', 'LINC01550', 'CLEC3A', 'SVOPL', 'CCDC158', 'SCN2B', 'VSIG1', 'CLECL1', 'PCSK1N', 'IL20RB', 'ARC', 'CCDC65', 'TAS1R3', 'GSDMC', 'TTC16', 'AURKC', 'ZCCHC18', 'ULBP3', 'DDX11L2', 'DUOXA1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.8833355335711962 Spearman Correlation: 0.7908561358526393 Coefficient of Determination: 0.78028166486951 RMSE: 0.24036903929282602 NRMSE: 0.05800831124184329 MAPE: 49.135261005451774 Pearson Correlation: 0.48909306583531165 Spearman Correlation: 0.36437420739440063 Coefficient of Determination: -0.5823389599333393 RMSE: 0.526150429869765 NRMSE: 0.28595287467310426 MAPE: 93.76962836444545 Predictor: ElasticNet Pearson Correlation: 0.7638050035195556 Spearman Correlation: 0.6911038620713357 Coefficient of Determination: 0.564192433574149 RMSE: 0.3385265700311747 NRMSE: 0.08169668895701299 MAPE: 62.63028737505121 Pearson Correlation: 0.71345658436748 Spearman Correlation: 0.5744512730465322 Coefficient of Determination: 0.5080819882293259 RMSE: 0.293363805925539 NRMSE: 0.15943771755582314 MAPE: 51.80878289350734 Predictor: RandomForests Pearson Correlation: 0.6351647954206122 Spearman Correlation: 0.5850321603739169 Coefficient of Determination: 0.3369906903227954 RMSE: 0.4175468302973679 NRMSE: 0.10076666512956245 MAPE: 84.3729762908243 Pearson Correlation: 0.6796460995087611 Spearman Correlation: 0.5669739537606088 Coefficient of Determination: 0.4094326136011379 RMSE: 0.3214362840379576 NRMSE: 0.1746945820564012 MAPE: 58.13603049591056 Protein: CCND1 x_train_column_count: 859 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'IQUB', 'LINC01119', 'CBLN4', 'NKPD1', 'LINC01341', 'SOX8', 'EYS', 'ECT2L', 'PAX2', 'FXYD1', 'PPP1R3G', 'RNF138P1', 'CCR8', 'CCIN', 'MYCBPAP', 'XPNPEP2', 'ETV2', 'TEKT3', 'STKLD1', 'SLC30A8', 'C19ORF18', 'UGT8', 'SLC28A3', 'JPH4', 'UBE2Q2P1', 'METTL7B', 'SLC25A18', 'HEPACAM2', 'CASQ1', 'PLP1', 'TEX14', 'IDI2.AS1', 'S100A3', 'GLIS1', 'SGK2', 'ZNF843', 'LRIT3', 'CCDC36', 'NR1I3', 'LINC00482', 'ALOXE3', 'CACNG1', 'WNT2B', 'MS4A15', 'PBX4', 'ZIC2', 'ST6GALNAC1', 'GTSE1.AS1', 'ADAMTS8', 'PYGO1', 'LGALS2', 'TMEM92', 'FUT9', 'FCRL6', 'CCDC151', 'C9ORF43', 'PITX2', 'BCHE', 'PNCK', 'TNNI3K', 'AOC2', 'GJB1', 'DQX1', 'CKMT2', 'LPAR3', 'FAM189A1', 'ABCA17P', 'CACNA1G', 'C2ORF50', 'C1ORF101', 'NLRP12', 'ADCYAP1', 'ENPP6', 'SLC6A20', 'IYD', 'ZNF835', 'OTOA', 'CA3', 'SPIB', 'CLDN9', 'FAM95B1', 'FAM90A1', 'RYR2', 'C2CD4A', 'C1ORF95', 'PCDH9', 'LINC01550', 'CLEC3A', 'SVOPL', 'CCDC158', 'SCN2B', 'VSIG1', 'CLECL1', 'PCSK1N', 'IL20RB', 'ARC', 'CCDC65', 'TAS1R3', 'GSDMC', 'TTC16', 'AURKC', 'ZCCHC18', 'ULBP3', 'DDX11L2', 'DUOXA1', 'B3GALT5.AS1', 'ALDH8A1', 'KNDC1', 'COLCA2', 'GSTM1', 'PCYT1B', 'BPIFB2', 'MYOZ1', 'PDE1C', 'CRYGS', 'PPP1R36', 'TARP', 'KLHL4', 'LOC148709', 'LUZP2', 'LOC441455', 'JPH3', 'CPEB1', 'IL22RA1', 'HOXD3', 'FAM57B', 'LOC90768', 'CAMP', 'OR7E91P', 'FLJ37201', 'RIMS1', 'IL12RB2', 'RELN', 'LBX2', 'FUT7', 'SCARA5', 'PLA2G5', 'KCNE1', 'IGSF5', 'TUBB8', 'HIST1H2BN', 'GPR18', 'ZBED3.AS1', 'SLC22A18AS', 'HOXB13', 'CD177', 'ZC3H12D', 'MNX1', 'ASTN1', 'CIDEA', 'TCHH', 'ONECUT2', 'C10ORF128', 'GAL', 'SP5', 'WDR72', 'CHRNA6', 'KCNE2', 'IRX4', 'FAM135B', 'BTBD8', 'SLC16A10', 'RSPH4A', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'MGC16142', 'CCDC7', 'DCSTAMP', 'CELF5', 'GRIN2C', 'MGAT5B', 'GBP1P1', 'CXXC4', 'YPEL4', 'GPR3', 'CXCR5', 'HOXA11', 'SLC30A2', 'OBP2B', 'SLC35F1', 'ATP13A5', 'NIPAL1', 'PYDC1', 'SKIDA1', 'CCDC153', 'RPGRIP1', 'SRL', 'STRC', 'WT1', 'TNFRSF9', 'LRP1B', 'PCSK9', 'PCAT18', 'FOXJ1', 'SLC18A2', 'PPP4R4', 'NOXO1', 'PCK1', 'INSM1', 'CNNM1', 'GPR174', 'MARCO', 'SLC25A53', 'C17ORF104', 'FOXD4', 'DMRT3', 'GPX2', 'INHA', 'COL23A1', 'NOS2', 'ADH1C', 'FOXD1', 'PKNOX2', 'KLHL14', 'BTLA', 'CRISP3', 'LBP', 'IL20', 'TNFRSF17', 'AVPR2', 'GLOD5', 'MYBPC1', 'PARP15', 'CXCL2', 'GPLD1', 'PFN1P2', 'CST9', 'GPR55', 'SLCO4C1', 'SLC23A1', 'STEAP1B', 'C2ORF40', 'BCL2L14', 'DHRS4L1', 'SCN3A', 'AMH', 'ULBP2', 'CXCR2P1', 'VAT1L', 'ZNF98', 'VSIG2', 'RNF212', 'VGLL1', 'HAP1', 'CYSLTR2', 'ZNF454', 'TPSG1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'ORM1', 'ZNF488', 'TMEM105', 'FAM178B', 'P2RX1', 'DKK1', 'DPY19L2P2', 'IL23A', 'SIGLEC17P', 'CRYM', 'PRKG2', 'CXCL1', 'AMBP', 'BRINP1', 'CTCFL', 'SUCNR1', 'DEPDC4', 'FABP7', 'SPDYE1', 'LRRC2', 'GPBAR1', 'XIRP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'FUT6', 'RERGL', 'BDKRB1', 'TENM1', 'LINC00930', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'NUGGC', 'KIAA0319', 'CECR2', 'SORCS1', 'ABHD11.AS1', 'PCDHGA3', 'PKD1L1', 'FAM184B', 'ECEL1', 'CBLN2', 'WSCD2', 'SPESP1', 'SEC14L5', 'SSUH2', 'FSCN2', 'DMRT2', 'FAM162B', 'CCL17', 'ZNF732', 'HOXD4', 'PIANP', 'TMEM217', 'GRIA3', 'CTSG', 'GNB3', 'RSPO1', 'RGS6', 'COL2A1', 'SERPINA6', 'MT1A', 'ADAMTS19', 'IL1R2', 'RNF175', 'CHRNB2', 'ADAM32', 'FLJ12825', 'RASL10A', 'PFKFB1', 'POM121L9P', 'HECTD2.AS1', 'DIRC3', 'PRSS21', 'SMIM5', 'CYP46A1', 'LRRC16B', 'CAPN11', 'IGF2BP3', 'VIPR2', 'TRAT1', 'ZNF804A', 'TBX21', 'HIST1H2BE', 'GPR87', 'LOC100126784', 'CYSRT1', 'PART1', 'FOXC2', 'HOGA1', 'EMX1', 'CA9', 'ZSCAN1', 'HTR7', 'CEP83.AS1', 'SLC13A2', 'XKR9', 'WIPF3', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'OTUD7A', 'CITED1', 'ZBTB16', 'CYP26A1', 'TMEM40', 'TMSB15A', 'PVALB', 'ANKK1', 'WFDC3', 'MAPT.IT1', 'ROPN1L', 'MYO3B', 'GZMM', 'CDHR1', 'FIRRE', 'M1AP', 'MRAP2', 'INE2', 'RFX8', 'TTC23L', 'IGSF22', 'CRTAC1', 'RBM12B.AS1', 'SPAG17', 'MROH7', 'KCNT2', 'PYGM', 'PCDHA12', 'CFAP61', 'BTC', 'HEATR4', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'NWD1', 'CLEC4E', 'LRRC4B', 'SRSF12', 'B3GAT1', 'CCBE1', 'OPCML', 'ADGRF1', 'MIA', 'LINC00173', 'TMEM59L', 'CIDEC', 'HPDL', 'NLRP7', 'RNF182', 'FRMPD1', 'SMC1B', 'KCNA6', 'KLK6', 'ABCC6P2', 'FASLG', 'IL11', 'LOC613037', 'LSAMP', 'GALNT13', 'TSPAN8', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'C15ORF56', 'FAM83A', 'COL28A1', 'PSORS1C1', 'ANO5', 'SLC6A14', 'SLC16A11', 'PTCHD1', 'TMPRSS4', 'C9ORF47', 'ADGRG2', 'SLC24A5', 'TUSC5', 'CYP4F12', 'LOC100133669', 'RUFY4', 'LINC00908', 'KCNQ3', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'VENTX', 'NBPF4', 'MYOM2', 'FAM157A', 'EBF2', 'MAG', 'DSCAML1', 'PTPRN', 'PCDHA5', 'KLK7', 'CCNI2', 'CDKN2B.AS1', 'SYT6', 'DLX2', 'SFTPA2', 'ZBTB20', 'NKX3.2', 'DLX5', 'FAM19A2', 'PLAC1', 'BRE.AS1', 'CNTN2', 'OR2W3', 'SLC6A17', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'TFAP2E', 'CD160', 'ABCD2', 'CD1A', 'GRIA2', 'CCDC144A', 'DEFB1', 'RGS9', 'CACNA1I', 'GGT3P', 'DLK2', 'MYO16', 'PWAR5', 'CDKL2', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CABP4', 'CHRNA10', 'TCEAL2', 'UNC13A', 'FKBP1AP1', 'LY6H', 'AGBL4', 'SLC39A2', 'XCL2', 'TUBAL3', 'S100A7', 'SPAG8', 'PCBP3', 'MPL', 'KCNH3', 'LINC00202.1', 'ARL9', 'TM6SF2', 'ZNF727', 'GRID2IP', 'P2RY12', 'MAK', 'TCN1', 'HRCT1', 'SNORD116.4', 'ELOVL3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'GPM6A', 'CD70', 'SYCE3', 'SYCE2', 'PGLYRP2', 'TIGD4', 'GRIN2A', 'JAKMIP1', 'ARMC3', 'BAIAP2L2', 'RAB9B', 'CTAGE6', 'MKRN3', 'SOSTDC1', 'ASIC3', 'KLF3.AS1', 'LONRF3', 'AGAP7P', 'LRRC43', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'LOC400927', 'ACHE', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'HRC', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'GPR82', 'CHODL', 'CXADRP3', 'TTBK1', 'LOC285593', 'PAH', 'TTYH1', 'HIST1H2BH', 'ADGRL3', 'MLLT4.AS1', 'APOBEC3A', 'CHST9', 'GABRB3', 'SLC25A34', 'MAPK4', 'BRSK2', 'TRH', 'DNASE1L2', 'C8ORF46', 'ST8SIA2', 'CAMK4', 'DGCR5', 'EPYC', 'GBP6', 'GPR63', 'CAPSL', 'MUC15', 'ANKLE1', 'IL17D', 'SLC35F3', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'HAMP', 'MYO15A', 'RMRP', 'FAM201A', 'TNFSF11', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'RHCE', 'DCLK3', 'PTX3', 'NEK5', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.4945905210592406e-15 NRMSE: 8.985045995955566e-16 MAPE: 6.2313349011351364e-12 Pearson Correlation: 0.0713406212938226 Spearman Correlation: 0.0950053653302117 Coefficient of Determination: -1.3213703611883694 RMSE: 0.3587016048578719 NRMSE: 0.27751253702564826 MAPE: 497.50394483202484 Predictor: ElasticNet Pearson Correlation: 0.6168268784393522 Spearman Correlation: 0.587649188398336 Coefficient of Determination: 0.296655336144366 RMSE: 0.20022420421413756 NRMSE: 0.1203690013430989 MAPE: 545.7526547920432 Pearson Correlation: 0.1937675644397912 Spearman Correlation: 0.21208662569505415 Coefficient of Determination: 0.018450402674736188 RMSE: 0.23324762310060657 NRMSE: 0.18045400066581557 MAPE: 391.0272740434684 Predictor: RandomForests Pearson Correlation: 0.5256051466381508 Spearman Correlation: 0.518360085017842 Coefficient of Determination: 0.15133059762490642 RMSE: 0.21993874879607694 NRMSE: 0.1322208154260962 MAPE: 554.3550492572584 Pearson Correlation: 0.2355251010104509 Spearman Correlation: 0.2591308165057068 Coefficient of Determination: 0.04685823315465276 RMSE: 0.2298475360924041 NRMSE: 0.17782349453209453 MAPE: 394.3216140786631 Protein: ERBB2 x_train_column_count: 666 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'IQUB', 'LINC01119', 'CBLN4', 'NKPD1', 'LINC01341', 'SOX8', 'EYS', 'ECT2L', 'PAX2', 'FXYD1', 'PPP1R3G', 'RNF138P1', 'CCR8', 'CCIN', 'MYCBPAP', 'XPNPEP2', 'ETV2', 'TEKT3', 'STKLD1', 'SLC30A8', 'C19ORF18', 'UGT8', 'SLC28A3', 'JPH4', 'UBE2Q2P1', 'METTL7B', 'SLC25A18', 'HEPACAM2', 'CASQ1', 'PLP1', 'TEX14', 'IDI2.AS1', 'S100A3', 'GLIS1', 'SGK2', 'ZNF843', 'LRIT3', 'CCDC36', 'NR1I3', 'LINC00482', 'ALOXE3', 'CACNG1', 'WNT2B', 'MS4A15', 'PBX4', 'ZIC2', 'ST6GALNAC1', 'GTSE1.AS1', 'ADAMTS8', 'PYGO1', 'LGALS2', 'TMEM92', 'FUT9', 'FCRL6', 'CCDC151', 'C9ORF43', 'PITX2', 'BCHE', 'PNCK', 'TNNI3K', 'AOC2', 'GJB1', 'DQX1', 'CKMT2', 'LPAR3', 'FAM189A1', 'ABCA17P', 'CACNA1G', 'C2ORF50', 'C1ORF101', 'NLRP12', 'ADCYAP1', 'ENPP6', 'SLC6A20', 'IYD', 'ZNF835', 'OTOA', 'CA3', 'SPIB', 'CLDN9', 'FAM95B1', 'FAM90A1', 'RYR2', 'C2CD4A', 'C1ORF95', 'PCDH9', 'LINC01550', 'CLEC3A', 'SVOPL', 'CCDC158', 'SCN2B', 'VSIG1', 'CLECL1', 'PCSK1N', 'IL20RB', 'ARC', 'CCDC65', 'TAS1R3', 'GSDMC', 'TTC16', 'AURKC', 'ZCCHC18', 'ULBP3', 'DDX11L2', 'DUOXA1', 'B3GALT5.AS1', 'ALDH8A1', 'KNDC1', 'COLCA2', 'GSTM1', 'PCYT1B', 'BPIFB2', 'MYOZ1', 'PDE1C', 'CRYGS', 'PPP1R36', 'TARP', 'KLHL4', 'LOC148709', 'LUZP2', 'LOC441455', 'JPH3', 'CPEB1', 'IL22RA1', 'HOXD3', 'FAM57B', 'LOC90768', 'CAMP', 'OR7E91P', 'FLJ37201', 'RIMS1', 'IL12RB2', 'RELN', 'LBX2', 'FUT7', 'SCARA5', 'PLA2G5', 'KCNE1', 'IGSF5', 'TUBB8', 'HIST1H2BN', 'GPR18', 'ZBED3.AS1', 'SLC22A18AS', 'HOXB13', 'CD177', 'ZC3H12D', 'MNX1', 'ASTN1', 'CIDEA', 'TCHH', 'ONECUT2', 'C10ORF128', 'GAL', 'SP5', 'WDR72', 'CHRNA6', 'KCNE2', 'IRX4', 'FAM135B', 'BTBD8', 'SLC16A10', 'RSPH4A', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'MGC16142', 'CCDC7', 'DCSTAMP', 'CELF5', 'GRIN2C', 'MGAT5B', 'GBP1P1', 'CXXC4', 'YPEL4', 'GPR3', 'CXCR5', 'HOXA11', 'SLC30A2', 'OBP2B', 'SLC35F1', 'ATP13A5', 'NIPAL1', 'PYDC1', 'SKIDA1', 'CCDC153', 'RPGRIP1', 'SRL', 'STRC', 'WT1', 'TNFRSF9', 'LRP1B', 'PCSK9', 'PCAT18', 'FOXJ1', 'SLC18A2', 'PPP4R4', 'NOXO1', 'PCK1', 'INSM1', 'CNNM1', 'GPR174', 'MARCO', 'SLC25A53', 'C17ORF104', 'FOXD4', 'DMRT3', 'GPX2', 'INHA', 'COL23A1', 'NOS2', 'ADH1C', 'FOXD1', 'PKNOX2', 'KLHL14', 'BTLA', 'CRISP3', 'LBP', 'IL20', 'TNFRSF17', 'AVPR2', 'GLOD5', 'MYBPC1', 'PARP15', 'CXCL2', 'GPLD1', 'PFN1P2', 'CST9', 'GPR55', 'SLCO4C1', 'SLC23A1', 'STEAP1B', 'C2ORF40', 'BCL2L14', 'DHRS4L1', 'SCN3A', 'AMH', 'ULBP2', 'CXCR2P1', 'VAT1L', 'ZNF98', 'VSIG2', 'RNF212', 'VGLL1', 'HAP1', 'CYSLTR2', 'ZNF454', 'TPSG1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'ORM1', 'ZNF488', 'TMEM105', 'FAM178B', 'P2RX1', 'DKK1', 'DPY19L2P2', 'IL23A', 'SIGLEC17P', 'CRYM', 'PRKG2', 'CXCL1', 'AMBP', 'BRINP1', 'CTCFL', 'SUCNR1', 'DEPDC4', 'FABP7', 'SPDYE1', 'LRRC2', 'GPBAR1', 'XIRP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'FUT6', 'RERGL', 'BDKRB1', 'TENM1', 'LINC00930', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'NUGGC', 'KIAA0319', 'CECR2', 'SORCS1', 'ABHD11.AS1', 'PCDHGA3', 'PKD1L1', 'FAM184B', 'ECEL1', 'CBLN2', 'WSCD2', 'SPESP1', 'SEC14L5', 'SSUH2', 'FSCN2', 'DMRT2', 'FAM162B', 'CCL17', 'ZNF732', 'HOXD4', 'PIANP', 'TMEM217', 'GRIA3', 'CTSG', 'GNB3', 'RSPO1', 'RGS6', 'COL2A1', 'SERPINA6', 'MT1A', 'ADAMTS19', 'IL1R2', 'RNF175', 'CHRNB2', 'ADAM32', 'FLJ12825', 'RASL10A', 'PFKFB1', 'POM121L9P', 'HECTD2.AS1', 'DIRC3', 'PRSS21', 'SMIM5', 'CYP46A1', 'LRRC16B', 'CAPN11', 'IGF2BP3', 'VIPR2', 'TRAT1', 'ZNF804A', 'TBX21', 'HIST1H2BE', 'GPR87', 'LOC100126784', 'CYSRT1', 'PART1', 'FOXC2', 'HOGA1', 'EMX1', 'CA9', 'ZSCAN1', 'HTR7', 'CEP83.AS1', 'SLC13A2', 'XKR9', 'WIPF3', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'OTUD7A', 'CITED1', 'ZBTB16', 'CYP26A1', 'TMEM40', 'TMSB15A', 'PVALB', 'ANKK1', 'WFDC3', 'MAPT.IT1', 'ROPN1L', 'MYO3B', 'GZMM', 'CDHR1', 'FIRRE', 'M1AP', 'MRAP2', 'INE2', 'RFX8', 'TTC23L', 'IGSF22', 'CRTAC1', 'RBM12B.AS1', 'SPAG17', 'MROH7', 'KCNT2', 'PYGM', 'PCDHA12', 'CFAP61', 'BTC', 'HEATR4', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'NWD1', 'CLEC4E', 'LRRC4B', 'SRSF12', 'B3GAT1', 'CCBE1', 'OPCML', 'ADGRF1', 'MIA', 'LINC00173', 'TMEM59L', 'CIDEC', 'HPDL', 'NLRP7', 'RNF182', 'FRMPD1', 'SMC1B', 'KCNA6', 'KLK6', 'ABCC6P2', 'FASLG', 'IL11', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 7.563565577506658e-15 NRMSE: 1.3573507487943323e-15 MAPE: 6.496411090745351e-12 Pearson Correlation: 0.3415532103094601 Spearman Correlation: 0.2508291873963516 Coefficient of Determination: -1.189652222929404 RMSE: 1.5643912661040797 NRMSE: 0.26651979932604386 MAPE: 978.9291670126838 Predictor: ElasticNet Pearson Correlation: 0.9108364874471024 Spearman Correlation: 0.835519808072667 Coefficient of Determination: 0.8011267449428326 RMSE: 0.43837478269224606 NRMSE: 0.07867034845436284 MAPE: 274.61541425745304 Pearson Correlation: 0.5314064122637786 Spearman Correlation: 0.41268168959125945 Coefficient of Determination: 0.2591918335623571 RMSE: 0.9099356744172665 NRMSE: 0.1550225180873412 MAPE: 4000.424971210651 Predictor: RandomForests Pearson Correlation: 0.6303086656239917 Spearman Correlation: 0.5827506362186329 Coefficient of Determination: 0.2768699059753875 RMSE: 0.8359216826568023 NRMSE: 0.15001376140136072 MAPE: 399.34739280642196 Pearson Correlation: 0.5633372406588792 Spearman Correlation: 0.46538386498878165 Coefficient of Determination: 0.22576418902050632 RMSE: 0.9302387766577327 NRMSE: 0.15848148570757153 MAPE: 1798.1043541991212 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.7671679846919506 Spearman Correlation: 0.7509509934943037 Coefficient of Determination: 0.588546716736309 RMSE: 0.28552892833170695 NRMSE: 0.0770560626133006 MAPE: 192.90855905533456 Pearson Correlation: 0.26323381048380345 Spearman Correlation: 0.2866549604916594 Coefficient of Determination: -0.2368315627587465 RMSE: 0.575833285329226 NRMSE: 0.21251675911456197 MAPE: 364.08758592626447 Predictor: ElasticNet Pearson Correlation: 0.6326749588770125 Spearman Correlation: 0.6226170433525079 Coefficient of Determination: 0.36986646748901963 RMSE: 0.3533508536055074 NRMSE: 0.0953592536454235 MAPE: 190.46916769940415 Pearson Correlation: 0.3549759147833534 Spearman Correlation: 0.39370305336064776 Coefficient of Determination: 0.11758832410439246 RMSE: 0.4863815678660727 NRMSE: 0.17950375070253163 MAPE: 256.0464983444937 Predictor: RandomForests Pearson Correlation: 0.5154944859599191 Spearman Correlation: 0.5235576499382765 Coefficient of Determination: 0.20115484466881217 RMSE: 0.3978516394897037 NRMSE: 0.10736873851082418 MAPE: 194.5277930395512 Pearson Correlation: 0.32326302191370265 Spearman Correlation: 0.3309774656131109 Coefficient of Determination: 0.09349563737126909 RMSE: 0.492976746902182 NRMSE: 0.181937764348917 MAPE: 280.3791610842418 Fold: 3 Protein: RB1 x_train_column_count: 372 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'LINC01119', 'IQUB', 'CBLN4', 'LINC01341', 'ECT2L', 'SOX8', 'PAX2', 'EYS', 'NKPD1', 'ETV2', 'FXYD1', 'RNF138P1', 'MYCBPAP', 'TEKT3', 'XPNPEP2', 'CCR8', 'PPP1R3G', 'CCIN', 'STKLD1', 'C19ORF18', 'SLC30A8', 'UGT8', 'SLC28A3', 'JPH4', 'PLP1', 'UBE2Q2P1', 'SLC25A18', 'METTL7B', 'HEPACAM2', 'TEX14', 'IDI2.AS1', 'CASQ1', 'LINC00482', 'S100A3', 'ALOXE3', 'GLIS1', 'SGK2', 'NR1I3', 'CCDC36', 'PBX4', 'ZNF843', 'LRIT3', 'WNT2B', 'CACNG1', 'MS4A15', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'LPAR3', 'AOC2', 'TNNI3K', 'BCHE', 'GJB1', 'C9ORF43', 'PITX2', 'FCRL6', 'CCDC151', 'PNCK', 'CKMT2', 'FAM189A1', 'DQX1', 'ABCA17P', 'CACNA1G', 'C1ORF101', 'ENPP6', 'NLRP12', 'C2ORF50', 'ADCYAP1', 'CLDN9', 'FAM90A1', 'SLC6A20', 'IYD', 'SPIB', 'FAM95B1', 'CA3', 'OTOA', 'ZNF835', 'PCDH9', 'C2CD4A', 'C1ORF95', 'RYR2', 'LINC01550', 'ZCCHC18', 'CLEC3A', 'VSIG1', 'AURKC', 'ULBP3', 'CLECL1', 'CCDC158', 'CCDC65', 'IL20RB', 'ARC', 'GSDMC', 'TAS1R3', 'DDX11L2', 'SCN2B', 'TTC16', 'PCSK1N', 'SVOPL', 'ALDH8A1', 'BPIFB2', 'CRYGS', 'MYOZ1', 'COLCA2', 'GSTM1', 'PDE1C', 'KNDC1', 'DUOXA1', 'B3GALT5.AS1', 'PCYT1B', 'IL22RA1', 'LOC148709', 'KLHL4', 'PPP1R36', 'HOXD3', 'TARP', 'FAM57B', 'OR7E91P', 'CAMP', 'LOC90768', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.8751122607832464 Spearman Correlation: 0.8182698991642284 Coefficient of Determination: 0.7658214689731647 RMSE: 0.11642201900974823 NRMSE: 0.04257680624990793 MAPE: 462.4080009651964 Pearson Correlation: -0.04374069376857086 Spearman Correlation: -0.08523547675158046 Coefficient of Determination: -1.993026792794824 RMSE: 0.3834886964756189 NRMSE: 0.2690884379609153 MAPE: 809.8230863716847 Predictor: ElasticNet Pearson Correlation: 0.5302026285208183 Spearman Correlation: 0.49811618051114626 Coefficient of Determination: 0.21284434911712735 RMSE: 0.21344790507267536 NRMSE: 0.07806023444729204 MAPE: 249.8635033775244 Pearson Correlation: 0.161257397186638 Spearman Correlation: 0.12740557862317486 Coefficient of Determination: -0.009295117092312788 RMSE: 0.22269288992892794 NRMSE: 0.1562603603357761 MAPE: 241.57783622480463 Predictor: RandomForests Pearson Correlation: 0.464143739872756 Spearman Correlation: 0.4671949778890147 Coefficient of Determination: 0.1417187299376801 RMSE: 0.22288272328058506 NRMSE: 0.08151065070237898 MAPE: 274.0268653977501 Pearson Correlation: 0.17625778879289702 Spearman Correlation: 0.14178979787777904 Coefficient of Determination: 0.006561899614965672 RMSE: 0.22093660245522445 NRMSE: 0.1550279989721883 MAPE: 206.82833531058037 Protein: CDH1 x_train_column_count: 836 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'LINC01119', 'IQUB', 'CBLN4', 'LINC01341', 'ECT2L', 'SOX8', 'PAX2', 'EYS', 'NKPD1', 'ETV2', 'FXYD1', 'RNF138P1', 'MYCBPAP', 'TEKT3', 'XPNPEP2', 'CCR8', 'PPP1R3G', 'CCIN', 'STKLD1', 'C19ORF18', 'SLC30A8', 'UGT8', 'SLC28A3', 'JPH4', 'PLP1', 'UBE2Q2P1', 'SLC25A18', 'METTL7B', 'HEPACAM2', 'TEX14', 'IDI2.AS1', 'CASQ1', 'LINC00482', 'S100A3', 'ALOXE3', 'GLIS1', 'SGK2', 'NR1I3', 'CCDC36', 'PBX4', 'ZNF843', 'LRIT3', 'WNT2B', 'CACNG1', 'MS4A15', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'LPAR3', 'AOC2', 'TNNI3K', 'BCHE', 'GJB1', 'C9ORF43', 'PITX2', 'FCRL6', 'CCDC151', 'PNCK', 'CKMT2', 'FAM189A1', 'DQX1', 'ABCA17P', 'CACNA1G', 'C1ORF101', 'ENPP6', 'NLRP12', 'C2ORF50', 'ADCYAP1', 'CLDN9', 'FAM90A1', 'SLC6A20', 'IYD', 'SPIB', 'FAM95B1', 'CA3', 'OTOA', 'ZNF835', 'PCDH9', 'C2CD4A', 'C1ORF95', 'RYR2', 'LINC01550', 'ZCCHC18', 'CLEC3A', 'VSIG1', 'AURKC', 'ULBP3', 'CLECL1', 'CCDC158', 'CCDC65', 'IL20RB', 'ARC', 'GSDMC', 'TAS1R3', 'DDX11L2', 'SCN2B', 'TTC16', 'PCSK1N', 'SVOPL', 'ALDH8A1', 'BPIFB2', 'CRYGS', 'MYOZ1', 'COLCA2', 'GSTM1', 'PDE1C', 'KNDC1', 'DUOXA1', 'B3GALT5.AS1', 'PCYT1B', 'IL22RA1', 'LOC148709', 'KLHL4', 'PPP1R36', 'HOXD3', 'TARP', 'FAM57B', 'OR7E91P', 'CAMP', 'LOC90768', 'LOC441455', 'JPH3', 'CPEB1', 'LUZP2', 'FLJ37201', 'IL12RB2', 'RELN', 'FUT7', 'LBX2', 'SCARA5', 'RIMS1', 'PLA2G5', 'GPR18', 'MNX1', 'ZBED3.AS1', 'HIST1H2BN', 'SLC22A18AS', 'HOXB13', 'KCNE1', 'CD177', 'TUBB8', 'ZC3H12D', 'IGSF5', 'ASTN1', 'CIDEA', 'TCHH', 'KCNE2', 'ONECUT2', 'IRX4', 'C10ORF128', 'GAL', 'WDR72', 'CHRNA6', 'SP5', 'BTBD8', 'FAM135B', 'SLC16A10', 'SCN7A', 'MGC16142', 'HOXB8', 'SCART1', 'LINC01124', 'RSPH4A', 'CCDC183', 'ALB', 'YPEL4', 'GBP1P1', 'CCDC7', 'DCSTAMP', 'GRIN2C', 'CELF5', 'MGAT5B', 'CXXC4', 'SLC35F1', 'GPR3', 'CXCR5', 'HOXA11', 'PYDC1', 'CCDC153', 'OBP2B', 'SLC30A2', 'ATP13A5', 'NIPAL1', 'SKIDA1', 'SRL', 'FOXJ1', 'PCSK9', 'LRP1B', 'RPGRIP1', 'WT1', 'TNFRSF9', 'PCAT18', 'STRC', 'SLC18A2', 'INSM1', 'NOXO1', 'CNNM1', 'GPR174', 'PCK1', 'MARCO', 'GPX2', 'FOXD4', 'SLC25A53', 'PPP4R4', 'DMRT3', 'C17ORF104', 'IL20', 'LBP', 'CRISP3', 'KLHL14', 'FOXD1', 'NOS2', 'PKNOX2', 'INHA', 'COL23A1', 'TNFRSF17', 'BTLA', 'AVPR2', 'ADH1C', 'GPLD1', 'PARP15', 'CXCL2', 'MYBPC1', 'GLOD5', 'CST9', 'GPR55', 'SLCO4C1', 'PFN1P2', 'BCL2L14', 'STEAP1B', 'C2ORF40', 'SLC23A1', 'ULBP2', 'VSIG2', 'SCN3A', 'AMH', 'VAT1L', 'CXCR2P1', 'ZNF98', 'DHRS4L1', 'CYSLTR2', 'ZNF454', 'RNF212', 'HAP1', 'TPSG1', 'VGLL1', 'FAM178B', 'FAM218A', 'P2RX1', 'ORM1', 'DBIL5P', 'TMEM105', 'DKK1', 'SYN2', 'EMILIN3', 'ZNF488', 'IL23A', 'SIGLEC17P', 'CRYM', 'AMBP', 'DPY19L2P2', 'PRKG2', 'CXCL1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'CTCFL', 'LRRC2', 'FABP7', 'GPBAR1', 'BRINP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'BDKRB1', 'XIRP1', 'TENM1', 'FUT6', 'LINC00930', 'RERGL', 'BMPER', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'RDM1', 'CECR2', 'CLEC12A', 'HCG27', 'ABHD11.AS1', 'FAM184B', 'PKD1L1', 'PCDHGA3', 'SORCS1', 'SEC14L5', 'WSCD2', 'SSUH2', 'CBLN2', 'ECEL1', 'SPESP1', 'FSCN2', 'CCL17', 'DMRT2', 'ZNF732', 'FAM162B', 'GRIA3', 'TMEM217', 'RSPO1', 'GNB3', 'CTSG', 'RGS6', 'HOXD4', 'PIANP', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'RNF175', 'IL1R2', 'ADAMTS19', 'SERPINA6', 'MT1A', 'RASL10A', 'DIRC3', 'PRSS21', 'HECTD2.AS1', 'PFKFB1', 'POM121L9P', 'CYP46A1', 'LRRC16B', 'SMIM5', 'CAPN11', 'FOXC2', 'ZNF804A', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'VIPR2', 'CYSRT1', 'GPR87', 'IGF2BP3', 'XKR9', 'EMX1', 'SLC26A10', 'HOGA1', 'CA9', 'CEP83.AS1', 'HS3ST3B1', 'SLC13A2', 'HTR7', 'WIPF3', 'ULBP1', 'ZSCAN1', 'ZBTB16', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CYP26A1', 'CITED1', 'ROPN1L', 'MAPT.IT1', 'ANKK1', 'WFDC3', 'GZMM', 'M1AP', 'PVALB', 'FIRRE', 'CDHR1', 'MYO3B', 'IGSF22', 'MRAP2', 'SPAG17', 'INE2', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'CRTAC1', 'MROH7', 'PYGM', 'BTC', 'PCDHA12', 'CFAP61', 'KCNT2', 'HEATR4', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'CLEC4E', 'MIA', 'OPCML', 'ADGRF1', 'LRRC4B', 'NWD1', 'SRSF12', 'B3GAT1', 'CCBE1', 'CIDEC', 'HPDL', 'LINC00173', 'TMEM59L', 'IL11', 'LSAMP', 'RNF182', 'TSPAN8', 'GAS2', 'FASLG', 'KCNA6', 'LOC613037', 'KLK6', 'GALNT13', 'ABCC6P2', 'DHDH', 'NLRP7', 'SMC1B', 'FRMPD1', 'SCN3B', 'RFPL1S', 'C15ORF56', 'COL28A1', 'FAM83A', 'SLC16A11', 'PSORS1C1', 'PTCHD1', 'SLC24A5', 'TUSC5', 'C9ORF47', 'ADGRG2', 'ANO5', 'SLC6A14', 'TMPRSS4', 'RUFY4', 'INTS4P2', 'IGSF1', 'KCNQ3', 'PIK3C2G', 'LOC100133669', 'CYP4F12', 'LINC00908', 'NBPF4', 'MYOM2', 'EBF2', 'VENTX', 'FAM157A', 'DSCAML1', 'PCDHA5', 'PTPRN', 'MAG', 'PLAC1', 'DLX5', 'CCNI2', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'CNTN2', 'FAM19A2', 'KLK7', 'ZBTB20', 'NKX3.2', 'SFTPA2', 'BRE.AS1', 'SLC6A17', 'OR2W3', 'PTPRR', 'RYR3', 'GHRLOS', 'ABCC2', 'TFAP2E', 'ABCD2', 'CD160', 'CD1A', 'GRIA2', 'RGS9', 'CCDC144A', 'DEFB1', 'CDKL2', 'DCX', 'DLK2', 'CACNA1I', 'PWAR5', 'GGT3P', 'MYO16', 'SLC6A11', 'WDR17', 'MSMB', 'CHRFAM7A', 'BTBD19', 'MMP12', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'AGBL4', 'SLC39A2', 'LY6H', 'XCL2', 'SPAG8', 'TUBAL3', 'S100A7', 'P2RY12', 'PCBP3', 'SNORD116.4', 'KCNH3', 'LINC00202.1', 'ZNF727', 'ARL9', 'TM6SF2', 'MAK', 'GRID2IP', 'MPL', 'HRCT1', 'TCN1', 'ELOVL3', 'SLC46A2', 'SYCE3', 'CD70', 'TCTEX1D1', 'NOX5', 'GPM6A', 'GRIN2A', 'PGLYRP2', 'TIGD4', 'SYCE2', 'ARMC3', 'JAKMIP1', 'RAB9B', 'MKRN3', 'CTAGE6', 'BAIAP2L2', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'LONRF3', 'AGAP7P', 'ACY3', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'KLK10', 'SCN9A', 'ACHE', 'AKR1E2', 'SCN2A', 'PRPH2', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'HRC', 'GPR82', 'PAH', 'LOC285593', 'CHODL', 'TTBK1', 'CXADRP3', 'MLLT4.AS1', 'TTYH1', 'CHST9', 'ADGRL3', 'APOBEC3A', 'GABRB3', 'SLC25A34', 'HIST1H2BH', 'TRH', 'BRSK2', 'MAPK4', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'DGCR5', 'CAMK4', 'EPYC', 'MUC15', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 5.883526415269963e-15 NRMSE: 9.368374279911408e-16 MAPE: 5.243219593717101e-12 Pearson Correlation: 0.3175056883049439 Spearman Correlation: 0.2647090362722727 Coefficient of Determination: -1.1849643556839715 RMSE: 1.3917489304556938 NRMSE: 0.27361084623435966 MAPE: 648.5882637754979 Predictor: ElasticNet Pearson Correlation: 0.9230731428808026 Spearman Correlation: 0.8894281590739458 Coefficient of Determination: 0.8211448681010838 RMSE: 0.4967990792580283 NRMSE: 0.07910561435273211 MAPE: 313.0836849334754 Pearson Correlation: 0.32094567127438073 Spearman Correlation: 0.3006047456950835 Coefficient of Determination: -0.20054184966514432 RMSE: 1.0316380926239082 NRMSE: 0.20281486506190938 MAPE: 408.6664712340436 Predictor: RandomForests Pearson Correlation: 0.6536085885375041 Spearman Correlation: 0.6254387024272486 Coefficient of Determination: 0.41944361422199283 RMSE: 0.8950602750768586 NRMSE: 0.14252098262425694 MAPE: 336.0818018437372 Pearson Correlation: 0.6256316720599945 Spearman Correlation: 0.39758498322389296 Coefficient of Determination: 0.3615061652279544 RMSE: 0.7523450571358887 NRMSE: 0.14790725772340832 MAPE: 181.72602055642383 Protein: CDH2 x_train_column_count: 474 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'LINC01119', 'IQUB', 'CBLN4', 'LINC01341', 'ECT2L', 'SOX8', 'PAX2', 'EYS', 'NKPD1', 'ETV2', 'FXYD1', 'RNF138P1', 'MYCBPAP', 'TEKT3', 'XPNPEP2', 'CCR8', 'PPP1R3G', 'CCIN', 'STKLD1', 'C19ORF18', 'SLC30A8', 'UGT8', 'SLC28A3', 'JPH4', 'PLP1', 'UBE2Q2P1', 'SLC25A18', 'METTL7B', 'HEPACAM2', 'TEX14', 'IDI2.AS1', 'CASQ1', 'LINC00482', 'S100A3', 'ALOXE3', 'GLIS1', 'SGK2', 'NR1I3', 'CCDC36', 'PBX4', 'ZNF843', 'LRIT3', 'WNT2B', 'CACNG1', 'MS4A15', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'LPAR3', 'AOC2', 'TNNI3K', 'BCHE', 'GJB1', 'C9ORF43', 'PITX2', 'FCRL6', 'CCDC151', 'PNCK', 'CKMT2', 'FAM189A1', 'DQX1', 'ABCA17P', 'CACNA1G', 'C1ORF101', 'ENPP6', 'NLRP12', 'C2ORF50', 'ADCYAP1', 'CLDN9', 'FAM90A1', 'SLC6A20', 'IYD', 'SPIB', 'FAM95B1', 'CA3', 'OTOA', 'ZNF835', 'PCDH9', 'C2CD4A', 'C1ORF95', 'RYR2', 'LINC01550', 'ZCCHC18', 'CLEC3A', 'VSIG1', 'AURKC', 'ULBP3', 'CLECL1', 'CCDC158', 'CCDC65', 'IL20RB', 'ARC', 'GSDMC', 'TAS1R3', 'DDX11L2', 'SCN2B', 'TTC16', 'PCSK1N', 'SVOPL', 'ALDH8A1', 'BPIFB2', 'CRYGS', 'MYOZ1', 'COLCA2', 'GSTM1', 'PDE1C', 'KNDC1', 'DUOXA1', 'B3GALT5.AS1', 'PCYT1B', 'IL22RA1', 'LOC148709', 'KLHL4', 'PPP1R36', 'HOXD3', 'TARP', 'FAM57B', 'OR7E91P', 'CAMP', 'LOC90768', 'LOC441455', 'JPH3', 'CPEB1', 'LUZP2', 'FLJ37201', 'IL12RB2', 'RELN', 'FUT7', 'LBX2', 'SCARA5', 'RIMS1', 'PLA2G5', 'GPR18', 'MNX1', 'ZBED3.AS1', 'HIST1H2BN', 'SLC22A18AS', 'HOXB13', 'KCNE1', 'CD177', 'TUBB8', 'ZC3H12D', 'IGSF5', 'ASTN1', 'CIDEA', 'TCHH', 'KCNE2', 'ONECUT2', 'IRX4', 'C10ORF128', 'GAL', 'WDR72', 'CHRNA6', 'SP5', 'BTBD8', 'FAM135B', 'SLC16A10', 'SCN7A', 'MGC16142', 'HOXB8', 'SCART1', 'LINC01124', 'RSPH4A', 'CCDC183', 'ALB', 'YPEL4', 'GBP1P1', 'CCDC7', 'DCSTAMP', 'GRIN2C', 'CELF5', 'MGAT5B', 'CXXC4', 'SLC35F1', 'GPR3', 'CXCR5', 'HOXA11', 'PYDC1', 'CCDC153', 'OBP2B', 'SLC30A2', 'ATP13A5', 'NIPAL1', 'SKIDA1', 'SRL', 'FOXJ1', 'PCSK9', 'LRP1B', 'RPGRIP1', 'WT1', 'TNFRSF9', 'PCAT18', 'STRC', 'SLC18A2', 'INSM1', 'NOXO1', 'CNNM1', 'GPR174', 'PCK1', 'MARCO', 'GPX2', 'FOXD4', 'SLC25A53', 'PPP4R4', 'DMRT3', 'C17ORF104', 'IL20', 'LBP', 'CRISP3', 'KLHL14', 'FOXD1', 'NOS2', 'PKNOX2', 'INHA', 'COL23A1', 'TNFRSF17', 'BTLA', 'AVPR2', 'ADH1C', 'GPLD1', 'PARP15', 'CXCL2', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.9545444724680601 Spearman Correlation: 0.9384920381107861 Coefficient of Determination: 0.9111551499193269 RMSE: 0.11363504128826225 NRMSE: 0.04117510011169732 MAPE: 578.2018125735397 Pearson Correlation: 0.07339792123310303 Spearman Correlation: 0.04658162819985287 Coefficient of Determination: -6.435205951529378 RMSE: 0.905224665573711 NRMSE: 0.47696622840944164 MAPE: 1474.2950055631698 Predictor: ElasticNet Pearson Correlation: 0.6867673692981417 Spearman Correlation: 0.6829861673551064 Coefficient of Determination: 0.3875074647181205 RMSE: 0.2983640850895056 NRMSE: 0.10811076349355231 MAPE: 1172.6678940968661 Pearson Correlation: -0.02108466723077229 Spearman Correlation: -0.02980835172508386 Coefficient of Determination: -0.25622678442862523 RMSE: 0.3720864904810388 NRMSE: 0.19605374970021228 MAPE: 2197.05950979228 Predictor: RandomForests Pearson Correlation: 0.4446657815066397 Spearman Correlation: 0.478002062775003 Coefficient of Determination: 0.1409535472719523 RMSE: 0.35334949020348894 NRMSE: 0.12803445546905173 MAPE: 571.7021105068637 Pearson Correlation: 0.07381898046211917 Spearman Correlation: 0.07844736218656093 Coefficient of Determination: -0.017249139437553573 RMSE: 0.3348293681336518 NRMSE: 0.17642283396929828 MAPE: 3244.3018425571026 Protein: CDH3 x_train_column_count: 78 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.5781534289266359 Spearman Correlation: 0.5728369809430283 Coefficient of Determination: 0.33426138737962663 RMSE: 0.17339344759266423 NRMSE: 0.12164887999709845 MAPE: 652.6182670532878 Pearson Correlation: 0.2855335217717521 Spearman Correlation: 0.3205002556141598 Coefficient of Determination: -0.03295704201251359 RMSE: 0.1914064856816547 NRMSE: 0.16648819720585445 MAPE: 257.72800441412625 Predictor: ElasticNet Pearson Correlation: 0.4979044362217941 Spearman Correlation: 0.5177856062995396 Coefficient of Determination: 0.22034245825535037 RMSE: 0.18764316541784923 NRMSE: 0.1316461563519737 MAPE: 341.4808514614244 Pearson Correlation: 0.3034165673901857 Spearman Correlation: 0.3290938789760471 Coefficient of Determination: 0.08938033323129868 RMSE: 0.17971487779424755 NRMSE: 0.15631866343754952 MAPE: 197.20130431321547 Predictor: RandomForests Pearson Correlation: 0.4625317299652922 Spearman Correlation: 0.4864817930407679 Coefficient of Determination: 0.19111416014524385 RMSE: 0.19112804823981341 NRMSE: 0.13409107049434066 MAPE: 300.1824559130542 Pearson Correlation: 0.19875883485081616 Spearman Correlation: 0.19644883352660258 Coefficient of Determination: 0.01971098130664828 RMSE: 0.18646296592585274 NRMSE: 0.16218825047696533 MAPE: 193.94707777126214 Protein: PTEN x_train_column_count: 886 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'LINC01119', 'IQUB', 'CBLN4', 'LINC01341', 'ECT2L', 'SOX8', 'PAX2', 'EYS', 'NKPD1', 'ETV2', 'FXYD1', 'RNF138P1', 'MYCBPAP', 'TEKT3', 'XPNPEP2', 'CCR8', 'PPP1R3G', 'CCIN', 'STKLD1', 'C19ORF18', 'SLC30A8', 'UGT8', 'SLC28A3', 'JPH4', 'PLP1', 'UBE2Q2P1', 'SLC25A18', 'METTL7B', 'HEPACAM2', 'TEX14', 'IDI2.AS1', 'CASQ1', 'LINC00482', 'S100A3', 'ALOXE3', 'GLIS1', 'SGK2', 'NR1I3', 'CCDC36', 'PBX4', 'ZNF843', 'LRIT3', 'WNT2B', 'CACNG1', 'MS4A15', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'LPAR3', 'AOC2', 'TNNI3K', 'BCHE', 'GJB1', 'C9ORF43', 'PITX2', 'FCRL6', 'CCDC151', 'PNCK', 'CKMT2', 'FAM189A1', 'DQX1', 'ABCA17P', 'CACNA1G', 'C1ORF101', 'ENPP6', 'NLRP12', 'C2ORF50', 'ADCYAP1', 'CLDN9', 'FAM90A1', 'SLC6A20', 'IYD', 'SPIB', 'FAM95B1', 'CA3', 'OTOA', 'ZNF835', 'PCDH9', 'C2CD4A', 'C1ORF95', 'RYR2', 'LINC01550', 'ZCCHC18', 'CLEC3A', 'VSIG1', 'AURKC', 'ULBP3', 'CLECL1', 'CCDC158', 'CCDC65', 'IL20RB', 'ARC', 'GSDMC', 'TAS1R3', 'DDX11L2', 'SCN2B', 'TTC16', 'PCSK1N', 'SVOPL', 'ALDH8A1', 'BPIFB2', 'CRYGS', 'MYOZ1', 'COLCA2', 'GSTM1', 'PDE1C', 'KNDC1', 'DUOXA1', 'B3GALT5.AS1', 'PCYT1B', 'IL22RA1', 'LOC148709', 'KLHL4', 'PPP1R36', 'HOXD3', 'TARP', 'FAM57B', 'OR7E91P', 'CAMP', 'LOC90768', 'LOC441455', 'JPH3', 'CPEB1', 'LUZP2', 'FLJ37201', 'IL12RB2', 'RELN', 'FUT7', 'LBX2', 'SCARA5', 'RIMS1', 'PLA2G5', 'GPR18', 'MNX1', 'ZBED3.AS1', 'HIST1H2BN', 'SLC22A18AS', 'HOXB13', 'KCNE1', 'CD177', 'TUBB8', 'ZC3H12D', 'IGSF5', 'ASTN1', 'CIDEA', 'TCHH', 'KCNE2', 'ONECUT2', 'IRX4', 'C10ORF128', 'GAL', 'WDR72', 'CHRNA6', 'SP5', 'BTBD8', 'FAM135B', 'SLC16A10', 'SCN7A', 'MGC16142', 'HOXB8', 'SCART1', 'LINC01124', 'RSPH4A', 'CCDC183', 'ALB', 'YPEL4', 'GBP1P1', 'CCDC7', 'DCSTAMP', 'GRIN2C', 'CELF5', 'MGAT5B', 'CXXC4', 'SLC35F1', 'GPR3', 'CXCR5', 'HOXA11', 'PYDC1', 'CCDC153', 'OBP2B', 'SLC30A2', 'ATP13A5', 'NIPAL1', 'SKIDA1', 'SRL', 'FOXJ1', 'PCSK9', 'LRP1B', 'RPGRIP1', 'WT1', 'TNFRSF9', 'PCAT18', 'STRC', 'SLC18A2', 'INSM1', 'NOXO1', 'CNNM1', 'GPR174', 'PCK1', 'MARCO', 'GPX2', 'FOXD4', 'SLC25A53', 'PPP4R4', 'DMRT3', 'C17ORF104', 'IL20', 'LBP', 'CRISP3', 'KLHL14', 'FOXD1', 'NOS2', 'PKNOX2', 'INHA', 'COL23A1', 'TNFRSF17', 'BTLA', 'AVPR2', 'ADH1C', 'GPLD1', 'PARP15', 'CXCL2', 'MYBPC1', 'GLOD5', 'CST9', 'GPR55', 'SLCO4C1', 'PFN1P2', 'BCL2L14', 'STEAP1B', 'C2ORF40', 'SLC23A1', 'ULBP2', 'VSIG2', 'SCN3A', 'AMH', 'VAT1L', 'CXCR2P1', 'ZNF98', 'DHRS4L1', 'CYSLTR2', 'ZNF454', 'RNF212', 'HAP1', 'TPSG1', 'VGLL1', 'FAM178B', 'FAM218A', 'P2RX1', 'ORM1', 'DBIL5P', 'TMEM105', 'DKK1', 'SYN2', 'EMILIN3', 'ZNF488', 'IL23A', 'SIGLEC17P', 'CRYM', 'AMBP', 'DPY19L2P2', 'PRKG2', 'CXCL1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'CTCFL', 'LRRC2', 'FABP7', 'GPBAR1', 'BRINP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'BDKRB1', 'XIRP1', 'TENM1', 'FUT6', 'LINC00930', 'RERGL', 'BMPER', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'RDM1', 'CECR2', 'CLEC12A', 'HCG27', 'ABHD11.AS1', 'FAM184B', 'PKD1L1', 'PCDHGA3', 'SORCS1', 'SEC14L5', 'WSCD2', 'SSUH2', 'CBLN2', 'ECEL1', 'SPESP1', 'FSCN2', 'CCL17', 'DMRT2', 'ZNF732', 'FAM162B', 'GRIA3', 'TMEM217', 'RSPO1', 'GNB3', 'CTSG', 'RGS6', 'HOXD4', 'PIANP', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'RNF175', 'IL1R2', 'ADAMTS19', 'SERPINA6', 'MT1A', 'RASL10A', 'DIRC3', 'PRSS21', 'HECTD2.AS1', 'PFKFB1', 'POM121L9P', 'CYP46A1', 'LRRC16B', 'SMIM5', 'CAPN11', 'FOXC2', 'ZNF804A', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'VIPR2', 'CYSRT1', 'GPR87', 'IGF2BP3', 'XKR9', 'EMX1', 'SLC26A10', 'HOGA1', 'CA9', 'CEP83.AS1', 'HS3ST3B1', 'SLC13A2', 'HTR7', 'WIPF3', 'ULBP1', 'ZSCAN1', 'ZBTB16', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CYP26A1', 'CITED1', 'ROPN1L', 'MAPT.IT1', 'ANKK1', 'WFDC3', 'GZMM', 'M1AP', 'PVALB', 'FIRRE', 'CDHR1', 'MYO3B', 'IGSF22', 'MRAP2', 'SPAG17', 'INE2', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'CRTAC1', 'MROH7', 'PYGM', 'BTC', 'PCDHA12', 'CFAP61', 'KCNT2', 'HEATR4', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'CLEC4E', 'MIA', 'OPCML', 'ADGRF1', 'LRRC4B', 'NWD1', 'SRSF12', 'B3GAT1', 'CCBE1', 'CIDEC', 'HPDL', 'LINC00173', 'TMEM59L', 'IL11', 'LSAMP', 'RNF182', 'TSPAN8', 'GAS2', 'FASLG', 'KCNA6', 'LOC613037', 'KLK6', 'GALNT13', 'ABCC6P2', 'DHDH', 'NLRP7', 'SMC1B', 'FRMPD1', 'SCN3B', 'RFPL1S', 'C15ORF56', 'COL28A1', 'FAM83A', 'SLC16A11', 'PSORS1C1', 'PTCHD1', 'SLC24A5', 'TUSC5', 'C9ORF47', 'ADGRG2', 'ANO5', 'SLC6A14', 'TMPRSS4', 'RUFY4', 'INTS4P2', 'IGSF1', 'KCNQ3', 'PIK3C2G', 'LOC100133669', 'CYP4F12', 'LINC00908', 'NBPF4', 'MYOM2', 'EBF2', 'VENTX', 'FAM157A', 'DSCAML1', 'PCDHA5', 'PTPRN', 'MAG', 'PLAC1', 'DLX5', 'CCNI2', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'CNTN2', 'FAM19A2', 'KLK7', 'ZBTB20', 'NKX3.2', 'SFTPA2', 'BRE.AS1', 'SLC6A17', 'OR2W3', 'PTPRR', 'RYR3', 'GHRLOS', 'ABCC2', 'TFAP2E', 'ABCD2', 'CD160', 'CD1A', 'GRIA2', 'RGS9', 'CCDC144A', 'DEFB1', 'CDKL2', 'DCX', 'DLK2', 'CACNA1I', 'PWAR5', 'GGT3P', 'MYO16', 'SLC6A11', 'WDR17', 'MSMB', 'CHRFAM7A', 'BTBD19', 'MMP12', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'AGBL4', 'SLC39A2', 'LY6H', 'XCL2', 'SPAG8', 'TUBAL3', 'S100A7', 'P2RY12', 'PCBP3', 'SNORD116.4', 'KCNH3', 'LINC00202.1', 'ZNF727', 'ARL9', 'TM6SF2', 'MAK', 'GRID2IP', 'MPL', 'HRCT1', 'TCN1', 'ELOVL3', 'SLC46A2', 'SYCE3', 'CD70', 'TCTEX1D1', 'NOX5', 'GPM6A', 'GRIN2A', 'PGLYRP2', 'TIGD4', 'SYCE2', 'ARMC3', 'JAKMIP1', 'RAB9B', 'MKRN3', 'CTAGE6', 'BAIAP2L2', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'LONRF3', 'AGAP7P', 'ACY3', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'KLK10', 'SCN9A', 'ACHE', 'AKR1E2', 'SCN2A', 'PRPH2', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'HRC', 'GPR82', 'PAH', 'LOC285593', 'CHODL', 'TTBK1', 'CXADRP3', 'MLLT4.AS1', 'TTYH1', 'CHST9', 'ADGRL3', 'APOBEC3A', 'GABRB3', 'SLC25A34', 'HIST1H2BH', 'TRH', 'BRSK2', 'MAPK4', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'DGCR5', 'CAMK4', 'EPYC', 'MUC15', 'GBP6', 'GPR63', 'ANKLE1', 'CAPSL', 'IL17D', 'ROBO2', 'SLC35F3', 'AIM1L', 'ASGR1', 'HAMP', 'TNFSF11', 'RMRP', 'FAM201A', 'PCDHA1', 'MYO15A', 'FAM159A', 'CHKB.AS1', 'DUSP9', 'NMU', 'PTX3', 'DCLK3', 'NEK5', 'RHCE', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'LOC100132215', 'RUNDC3A', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'LINC00961', 'CYP2E1', 'RRN3P1', 'FOLR1', 'PNMA6A', 'ROPN1B', 'SIGLEC6', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'ADRA2B', 'THSD7B', 'SLC2A14', 'ATP13A4', 'MT1L', 'DPEP1', 'KISS1R', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.1303837805142994e-15 NRMSE: 6.45826562507122e-16 MAPE: 8.723766037271036e-12 Pearson Correlation: 0.011461661899979395 Spearman Correlation: 0.047264928490380186 Coefficient of Determination: -3.5943789288248684 RMSE: 1.0094759224119536 NRMSE: 0.24135129403049627 MAPE: 403.7170142863816 Predictor: ElasticNet Pearson Correlation: 0.8460751278842252 Spearman Correlation: 0.8090231684193534 Coefficient of Determination: 0.6358136342461727 RMSE: 0.37976562577335676 NRMSE: 0.0593801306814724 MAPE: 356.63424389121303 Pearson Correlation: 0.15292772921837586 Spearman Correlation: 0.12423346924525244 Coefficient of Determination: -0.33509026886618054 RMSE: 0.5441741082988921 NRMSE: 0.13010426727367957 MAPE: 170.36378648709407 Predictor: RandomForests Pearson Correlation: 0.5471359501005076 Spearman Correlation: 0.5462561748679526 Coefficient of Determination: 0.1650146651529787 RMSE: 0.5750336171832976 NRMSE: 0.08991222221613597 MAPE: 335.69286854696793 Pearson Correlation: 0.1661370525236204 Spearman Correlation: 0.19233905659671569 Coefficient of Determination: -0.023409265668744572 RMSE: 0.47643891985887155 NRMSE: 0.1139097498825782 MAPE: 95.08513023715432 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'LINC01119', 'IQUB', 'CBLN4', 'LINC01341', 'ECT2L', 'SOX8', 'PAX2', 'EYS', 'NKPD1', 'ETV2', 'FXYD1', 'RNF138P1', 'MYCBPAP', 'TEKT3', 'XPNPEP2', 'CCR8', 'PPP1R3G', 'CCIN', 'STKLD1', 'C19ORF18', 'SLC30A8', 'UGT8', 'SLC28A3', 'JPH4', 'PLP1', 'UBE2Q2P1', 'SLC25A18', 'METTL7B', 'HEPACAM2', 'TEX14', 'IDI2.AS1', 'CASQ1', 'LINC00482', 'S100A3', 'ALOXE3', 'GLIS1', 'SGK2', 'NR1I3', 'CCDC36', 'PBX4', 'ZNF843', 'LRIT3', 'WNT2B', 'CACNG1', 'MS4A15', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'LPAR3', 'AOC2', 'TNNI3K', 'BCHE', 'GJB1', 'C9ORF43', 'PITX2', 'FCRL6', 'CCDC151', 'PNCK', 'CKMT2', 'FAM189A1', 'DQX1', 'ABCA17P', 'CACNA1G', 'C1ORF101', 'ENPP6', 'NLRP12', 'C2ORF50', 'ADCYAP1', 'CLDN9', 'FAM90A1', 'SLC6A20', 'IYD', 'SPIB', 'FAM95B1', 'CA3', 'OTOA', 'ZNF835', 'PCDH9', 'C2CD4A', 'C1ORF95', 'RYR2', 'LINC01550', 'ZCCHC18', 'CLEC3A', 'VSIG1', 'AURKC', 'ULBP3', 'CLECL1', 'CCDC158', 'CCDC65', 'IL20RB', 'ARC', 'GSDMC', 'TAS1R3', 'DDX11L2', 'SCN2B', 'TTC16', 'PCSK1N', 'SVOPL', 'ALDH8A1', 'BPIFB2', 'CRYGS', 'MYOZ1', 'COLCA2', 'GSTM1', 'PDE1C', 'KNDC1', 'DUOXA1', 'B3GALT5.AS1', 'PCYT1B', 'IL22RA1', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.8264176087410744 Spearman Correlation: 0.8131101033899704 Coefficient of Determination: 0.6829660640373152 RMSE: 0.10700919335848161 NRMSE: 0.07212222882921415 MAPE: 216.61520201240268 Pearson Correlation: 0.22715253005853966 Spearman Correlation: 0.20151124078853852 Coefficient of Determination: -1.0216599746656034 RMSE: 0.304462950695435 NRMSE: 0.20941264517634417 MAPE: 615.6593226815671 Predictor: ElasticNet Pearson Correlation: 0.49182311838252996 Spearman Correlation: 0.48106582462374503 Coefficient of Determination: 0.17719869005238698 RMSE: 0.17239144156443087 NRMSE: 0.11618866198772738 MAPE: 155.46946661409575 Pearson Correlation: 0.19305996594295863 Spearman Correlation: 0.18016434120126187 Coefficient of Determination: 0.03652066162794587 RMSE: 0.21018494161558324 NRMSE: 0.14456729299712032 MAPE: 153.15265179234154 Predictor: RandomForests Pearson Correlation: 0.4921374659589384 Spearman Correlation: 0.47651639932327944 Coefficient of Determination: 0.14182412216438944 RMSE: 0.17605824386298946 NRMSE: 0.1186600193183279 MAPE: 141.63783369491549 Pearson Correlation: 0.20651252465455486 Spearman Correlation: 0.1885385104552426 Coefficient of Determination: 0.03647908041643244 RMSE: 0.21018947707881125 NRMSE: 0.1445704125338308 MAPE: 139.75753004598067 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'LINC01119', 'IQUB', 'CBLN4', 'LINC01341', 'ECT2L', 'SOX8', 'PAX2', 'EYS', 'NKPD1', 'ETV2', 'FXYD1', 'RNF138P1', 'MYCBPAP', 'TEKT3', 'XPNPEP2', 'CCR8', 'PPP1R3G', 'CCIN', 'STKLD1', 'C19ORF18', 'SLC30A8', 'UGT8', 'SLC28A3', 'JPH4', 'PLP1', 'UBE2Q2P1', 'SLC25A18', 'METTL7B', 'HEPACAM2', 'TEX14', 'IDI2.AS1', 'CASQ1', 'LINC00482', 'S100A3', 'ALOXE3', 'GLIS1', 'SGK2', 'NR1I3', 'CCDC36', 'PBX4', 'ZNF843', 'LRIT3', 'WNT2B', 'CACNG1', 'MS4A15', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'LPAR3', 'AOC2', 'TNNI3K', 'BCHE', 'GJB1', 'C9ORF43', 'PITX2', 'FCRL6', 'CCDC151', 'PNCK', 'CKMT2', 'FAM189A1', 'DQX1', 'ABCA17P', 'CACNA1G', 'C1ORF101', 'ENPP6', 'NLRP12', 'C2ORF50', 'ADCYAP1', 'CLDN9', 'FAM90A1', 'SLC6A20', 'IYD', 'SPIB', 'FAM95B1', 'CA3', 'OTOA', 'ZNF835', 'PCDH9', 'C2CD4A', 'C1ORF95', 'RYR2', 'LINC01550', 'ZCCHC18', 'CLEC3A', 'VSIG1', 'AURKC', 'ULBP3', 'CLECL1', 'CCDC158', 'CCDC65', 'IL20RB', 'ARC', 'GSDMC', 'TAS1R3', 'DDX11L2', 'SCN2B', 'TTC16', 'PCSK1N', 'SVOPL', 'ALDH8A1', 'BPIFB2', 'CRYGS', 'MYOZ1', 'COLCA2', 'GSTM1', 'PDE1C', 'KNDC1', 'DUOXA1', 'B3GALT5.AS1', 'PCYT1B', 'IL22RA1', 'LOC148709', 'KLHL4', 'PPP1R36', 'HOXD3', 'TARP', 'FAM57B', 'OR7E91P', 'CAMP', 'LOC90768', 'LOC441455', 'JPH3', 'CPEB1', 'LUZP2', 'FLJ37201', 'IL12RB2', 'RELN', 'FUT7', 'LBX2', 'SCARA5', 'RIMS1', 'PLA2G5', 'GPR18', 'MNX1', 'ZBED3.AS1', 'HIST1H2BN', 'SLC22A18AS', 'HOXB13', 'KCNE1', 'CD177', 'TUBB8', 'ZC3H12D', 'IGSF5', 'ASTN1', 'CIDEA', 'TCHH', 'KCNE2', 'ONECUT2', 'IRX4', 'C10ORF128', 'GAL', 'WDR72', 'CHRNA6', 'SP5', 'BTBD8', 'FAM135B', 'SLC16A10', 'SCN7A', 'MGC16142', 'HOXB8', 'SCART1', 'LINC01124', 'RSPH4A', 'CCDC183', 'ALB', 'YPEL4', 'GBP1P1', 'CCDC7', 'DCSTAMP', 'GRIN2C', 'CELF5', 'MGAT5B', 'CXXC4', 'SLC35F1', 'GPR3', 'CXCR5', 'HOXA11', 'PYDC1', 'CCDC153', 'OBP2B', 'SLC30A2', 'ATP13A5', 'NIPAL1', 'SKIDA1', 'SRL', 'FOXJ1', 'PCSK9', 'LRP1B', 'RPGRIP1', 'WT1', 'TNFRSF9', 'PCAT18', 'STRC', 'SLC18A2', 'INSM1', 'NOXO1', 'CNNM1', 'GPR174', 'PCK1', 'MARCO', 'GPX2', 'FOXD4', 'SLC25A53', 'PPP4R4', 'DMRT3', 'C17ORF104', 'IL20', 'LBP', 'CRISP3', 'KLHL14', 'FOXD1', 'NOS2', 'PKNOX2', 'INHA', 'COL23A1', 'TNFRSF17', 'BTLA', 'AVPR2', 'ADH1C', 'GPLD1', 'PARP15', 'CXCL2', 'MYBPC1', 'GLOD5', 'CST9', 'GPR55', 'SLCO4C1', 'PFN1P2', 'BCL2L14', 'STEAP1B', 'C2ORF40', 'SLC23A1', 'ULBP2', 'VSIG2', 'SCN3A', 'AMH', 'VAT1L', 'CXCR2P1', 'ZNF98', 'DHRS4L1', 'CYSLTR2', 'ZNF454', 'RNF212', 'HAP1', 'TPSG1', 'VGLL1', 'FAM178B', 'FAM218A', 'P2RX1', 'ORM1', 'DBIL5P', 'TMEM105', 'DKK1', 'SYN2', 'EMILIN3', 'ZNF488', 'IL23A', 'SIGLEC17P', 'CRYM', 'AMBP', 'DPY19L2P2', 'PRKG2', 'CXCL1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'CTCFL', 'LRRC2', 'FABP7', 'GPBAR1', 'BRINP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'BDKRB1', 'XIRP1', 'TENM1', 'FUT6', 'LINC00930', 'RERGL', 'BMPER', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'RDM1', 'CECR2', 'CLEC12A', 'HCG27', 'ABHD11.AS1', 'FAM184B', 'PKD1L1', 'PCDHGA3', 'SORCS1', 'SEC14L5', 'WSCD2', 'SSUH2', 'CBLN2', 'ECEL1', 'SPESP1', 'FSCN2', 'CCL17', 'DMRT2', 'ZNF732', 'FAM162B', 'GRIA3', 'TMEM217', 'RSPO1', 'GNB3', 'CTSG', 'RGS6', 'HOXD4', 'PIANP', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'RNF175', 'IL1R2', 'ADAMTS19', 'SERPINA6', 'MT1A', 'RASL10A', 'DIRC3', 'PRSS21', 'HECTD2.AS1', 'PFKFB1', 'POM121L9P', 'CYP46A1', 'LRRC16B', 'SMIM5', 'CAPN11', 'FOXC2', 'ZNF804A', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'VIPR2', 'CYSRT1', 'GPR87', 'IGF2BP3', 'XKR9', 'EMX1', 'SLC26A10', 'HOGA1', 'CA9', 'CEP83.AS1', 'HS3ST3B1', 'SLC13A2', 'HTR7', 'WIPF3', 'ULBP1', 'ZSCAN1', 'ZBTB16', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CYP26A1', 'CITED1', 'ROPN1L', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 5.016863975251957e-15 NRMSE: 1.1712887502922948e-15 MAPE: 7.131587275718222e-12 Pearson Correlation: 0.10124170752041832 Spearman Correlation: 0.1378944874624372 Coefficient of Determination: -3.718422235627404 RMSE: 1.4261341991101713 NRMSE: 0.44028717826253316 MAPE: 648.9418629828881 Predictor: ElasticNet Pearson Correlation: 0.8293210105447208 Spearman Correlation: 0.792533159976394 Coefficient of Determination: 0.6382136876533056 RMSE: 0.4015453759854247 NRMSE: 0.09374892042991799 MAPE: 278.34289433597064 Pearson Correlation: 0.336552985376233 Spearman Correlation: 0.32781206748213826 Coefficient of Determination: 0.030167852394397676 RMSE: 0.6465621563493302 NRMSE: 0.19961166878124487 MAPE: 263.39835432755063 Predictor: RandomForests Pearson Correlation: 0.5827936033923328 Spearman Correlation: 0.5361011722997173 Coefficient of Determination: 0.2354787843559013 RMSE: 0.5837183336429017 NRMSE: 0.13628089597564946 MAPE: 271.90238540417096 Pearson Correlation: 0.3304623588018438 Spearman Correlation: 0.30449008092370233 Coefficient of Determination: 0.09197771028028656 RMSE: 0.62561945897762 NRMSE: 0.193146077298515 MAPE: 166.70176250768534 Protein: TP53 x_train_column_count: 1002 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'LINC01119', 'IQUB', 'CBLN4', 'LINC01341', 'ECT2L', 'SOX8', 'PAX2', 'EYS', 'NKPD1', 'ETV2', 'FXYD1', 'RNF138P1', 'MYCBPAP', 'TEKT3', 'XPNPEP2', 'CCR8', 'PPP1R3G', 'CCIN', 'STKLD1', 'C19ORF18', 'SLC30A8', 'UGT8', 'SLC28A3', 'JPH4', 'PLP1', 'UBE2Q2P1', 'SLC25A18', 'METTL7B', 'HEPACAM2', 'TEX14', 'IDI2.AS1', 'CASQ1', 'LINC00482', 'S100A3', 'ALOXE3', 'GLIS1', 'SGK2', 'NR1I3', 'CCDC36', 'PBX4', 'ZNF843', 'LRIT3', 'WNT2B', 'CACNG1', 'MS4A15', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'LPAR3', 'AOC2', 'TNNI3K', 'BCHE', 'GJB1', 'C9ORF43', 'PITX2', 'FCRL6', 'CCDC151', 'PNCK', 'CKMT2', 'FAM189A1', 'DQX1', 'ABCA17P', 'CACNA1G', 'C1ORF101', 'ENPP6', 'NLRP12', 'C2ORF50', 'ADCYAP1', 'CLDN9', 'FAM90A1', 'SLC6A20', 'IYD', 'SPIB', 'FAM95B1', 'CA3', 'OTOA', 'ZNF835', 'PCDH9', 'C2CD4A', 'C1ORF95', 'RYR2', 'LINC01550', 'ZCCHC18', 'CLEC3A', 'VSIG1', 'AURKC', 'ULBP3', 'CLECL1', 'CCDC158', 'CCDC65', 'IL20RB', 'ARC', 'GSDMC', 'TAS1R3', 'DDX11L2', 'SCN2B', 'TTC16', 'PCSK1N', 'SVOPL', 'ALDH8A1', 'BPIFB2', 'CRYGS', 'MYOZ1', 'COLCA2', 'GSTM1', 'PDE1C', 'KNDC1', 'DUOXA1', 'B3GALT5.AS1', 'PCYT1B', 'IL22RA1', 'LOC148709', 'KLHL4', 'PPP1R36', 'HOXD3', 'TARP', 'FAM57B', 'OR7E91P', 'CAMP', 'LOC90768', 'LOC441455', 'JPH3', 'CPEB1', 'LUZP2', 'FLJ37201', 'IL12RB2', 'RELN', 'FUT7', 'LBX2', 'SCARA5', 'RIMS1', 'PLA2G5', 'GPR18', 'MNX1', 'ZBED3.AS1', 'HIST1H2BN', 'SLC22A18AS', 'HOXB13', 'KCNE1', 'CD177', 'TUBB8', 'ZC3H12D', 'IGSF5', 'ASTN1', 'CIDEA', 'TCHH', 'KCNE2', 'ONECUT2', 'IRX4', 'C10ORF128', 'GAL', 'WDR72', 'CHRNA6', 'SP5', 'BTBD8', 'FAM135B', 'SLC16A10', 'SCN7A', 'MGC16142', 'HOXB8', 'SCART1', 'LINC01124', 'RSPH4A', 'CCDC183', 'ALB', 'YPEL4', 'GBP1P1', 'CCDC7', 'DCSTAMP', 'GRIN2C', 'CELF5', 'MGAT5B', 'CXXC4', 'SLC35F1', 'GPR3', 'CXCR5', 'HOXA11', 'PYDC1', 'CCDC153', 'OBP2B', 'SLC30A2', 'ATP13A5', 'NIPAL1', 'SKIDA1', 'SRL', 'FOXJ1', 'PCSK9', 'LRP1B', 'RPGRIP1', 'WT1', 'TNFRSF9', 'PCAT18', 'STRC', 'SLC18A2', 'INSM1', 'NOXO1', 'CNNM1', 'GPR174', 'PCK1', 'MARCO', 'GPX2', 'FOXD4', 'SLC25A53', 'PPP4R4', 'DMRT3', 'C17ORF104', 'IL20', 'LBP', 'CRISP3', 'KLHL14', 'FOXD1', 'NOS2', 'PKNOX2', 'INHA', 'COL23A1', 'TNFRSF17', 'BTLA', 'AVPR2', 'ADH1C', 'GPLD1', 'PARP15', 'CXCL2', 'MYBPC1', 'GLOD5', 'CST9', 'GPR55', 'SLCO4C1', 'PFN1P2', 'BCL2L14', 'STEAP1B', 'C2ORF40', 'SLC23A1', 'ULBP2', 'VSIG2', 'SCN3A', 'AMH', 'VAT1L', 'CXCR2P1', 'ZNF98', 'DHRS4L1', 'CYSLTR2', 'ZNF454', 'RNF212', 'HAP1', 'TPSG1', 'VGLL1', 'FAM178B', 'FAM218A', 'P2RX1', 'ORM1', 'DBIL5P', 'TMEM105', 'DKK1', 'SYN2', 'EMILIN3', 'ZNF488', 'IL23A', 'SIGLEC17P', 'CRYM', 'AMBP', 'DPY19L2P2', 'PRKG2', 'CXCL1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'CTCFL', 'LRRC2', 'FABP7', 'GPBAR1', 'BRINP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'BDKRB1', 'XIRP1', 'TENM1', 'FUT6', 'LINC00930', 'RERGL', 'BMPER', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'RDM1', 'CECR2', 'CLEC12A', 'HCG27', 'ABHD11.AS1', 'FAM184B', 'PKD1L1', 'PCDHGA3', 'SORCS1', 'SEC14L5', 'WSCD2', 'SSUH2', 'CBLN2', 'ECEL1', 'SPESP1', 'FSCN2', 'CCL17', 'DMRT2', 'ZNF732', 'FAM162B', 'GRIA3', 'TMEM217', 'RSPO1', 'GNB3', 'CTSG', 'RGS6', 'HOXD4', 'PIANP', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'RNF175', 'IL1R2', 'ADAMTS19', 'SERPINA6', 'MT1A', 'RASL10A', 'DIRC3', 'PRSS21', 'HECTD2.AS1', 'PFKFB1', 'POM121L9P', 'CYP46A1', 'LRRC16B', 'SMIM5', 'CAPN11', 'FOXC2', 'ZNF804A', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'VIPR2', 'CYSRT1', 'GPR87', 'IGF2BP3', 'XKR9', 'EMX1', 'SLC26A10', 'HOGA1', 'CA9', 'CEP83.AS1', 'HS3ST3B1', 'SLC13A2', 'HTR7', 'WIPF3', 'ULBP1', 'ZSCAN1', 'ZBTB16', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CYP26A1', 'CITED1', 'ROPN1L', 'MAPT.IT1', 'ANKK1', 'WFDC3', 'GZMM', 'M1AP', 'PVALB', 'FIRRE', 'CDHR1', 'MYO3B', 'IGSF22', 'MRAP2', 'SPAG17', 'INE2', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'CRTAC1', 'MROH7', 'PYGM', 'BTC', 'PCDHA12', 'CFAP61', 'KCNT2', 'HEATR4', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'CLEC4E', 'MIA', 'OPCML', 'ADGRF1', 'LRRC4B', 'NWD1', 'SRSF12', 'B3GAT1', 'CCBE1', 'CIDEC', 'HPDL', 'LINC00173', 'TMEM59L', 'IL11', 'LSAMP', 'RNF182', 'TSPAN8', 'GAS2', 'FASLG', 'KCNA6', 'LOC613037', 'KLK6', 'GALNT13', 'ABCC6P2', 'DHDH', 'NLRP7', 'SMC1B', 'FRMPD1', 'SCN3B', 'RFPL1S', 'C15ORF56', 'COL28A1', 'FAM83A', 'SLC16A11', 'PSORS1C1', 'PTCHD1', 'SLC24A5', 'TUSC5', 'C9ORF47', 'ADGRG2', 'ANO5', 'SLC6A14', 'TMPRSS4', 'RUFY4', 'INTS4P2', 'IGSF1', 'KCNQ3', 'PIK3C2G', 'LOC100133669', 'CYP4F12', 'LINC00908', 'NBPF4', 'MYOM2', 'EBF2', 'VENTX', 'FAM157A', 'DSCAML1', 'PCDHA5', 'PTPRN', 'MAG', 'PLAC1', 'DLX5', 'CCNI2', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'CNTN2', 'FAM19A2', 'KLK7', 'ZBTB20', 'NKX3.2', 'SFTPA2', 'BRE.AS1', 'SLC6A17', 'OR2W3', 'PTPRR', 'RYR3', 'GHRLOS', 'ABCC2', 'TFAP2E', 'ABCD2', 'CD160', 'CD1A', 'GRIA2', 'RGS9', 'CCDC144A', 'DEFB1', 'CDKL2', 'DCX', 'DLK2', 'CACNA1I', 'PWAR5', 'GGT3P', 'MYO16', 'SLC6A11', 'WDR17', 'MSMB', 'CHRFAM7A', 'BTBD19', 'MMP12', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'AGBL4', 'SLC39A2', 'LY6H', 'XCL2', 'SPAG8', 'TUBAL3', 'S100A7', 'P2RY12', 'PCBP3', 'SNORD116.4', 'KCNH3', 'LINC00202.1', 'ZNF727', 'ARL9', 'TM6SF2', 'MAK', 'GRID2IP', 'MPL', 'HRCT1', 'TCN1', 'ELOVL3', 'SLC46A2', 'SYCE3', 'CD70', 'TCTEX1D1', 'NOX5', 'GPM6A', 'GRIN2A', 'PGLYRP2', 'TIGD4', 'SYCE2', 'ARMC3', 'JAKMIP1', 'RAB9B', 'MKRN3', 'CTAGE6', 'BAIAP2L2', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'LONRF3', 'AGAP7P', 'ACY3', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'KLK10', 'SCN9A', 'ACHE', 'AKR1E2', 'SCN2A', 'PRPH2', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'HRC', 'GPR82', 'PAH', 'LOC285593', 'CHODL', 'TTBK1', 'CXADRP3', 'MLLT4.AS1', 'TTYH1', 'CHST9', 'ADGRL3', 'APOBEC3A', 'GABRB3', 'SLC25A34', 'HIST1H2BH', 'TRH', 'BRSK2', 'MAPK4', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'DGCR5', 'CAMK4', 'EPYC', 'MUC15', 'GBP6', 'GPR63', 'ANKLE1', 'CAPSL', 'IL17D', 'ROBO2', 'SLC35F3', 'AIM1L', 'ASGR1', 'HAMP', 'TNFSF11', 'RMRP', 'FAM201A', 'PCDHA1', 'MYO15A', 'FAM159A', 'CHKB.AS1', 'DUSP9', 'NMU', 'PTX3', 'DCLK3', 'NEK5', 'RHCE', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'LOC100132215', 'RUNDC3A', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'LINC00961', 'CYP2E1', 'RRN3P1', 'FOLR1', 'PNMA6A', 'ROPN1B', 'SIGLEC6', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'ADRA2B', 'THSD7B', 'SLC2A14', 'ATP13A4', 'MT1L', 'DPEP1', 'KISS1R', 'KIF19', 'TMEM150B', 'IL1RL1', 'ZMAT4', 'CCR10', 'IL24', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'LIN7A', 'TTLL9', 'WBP2NL', 'RHBG', 'A2ML1', 'PRRT4', 'KIAA1210', 'NIPAL4', 'GPR135', 'LOC90246', 'GNMT', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'FIGF', 'OXGR1', 'CBLN1', 'B3GALT5', 'PCDHB18P', 'RRAD', 'MAP7D2', 'DPF3', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'SLC5A8', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PON3', 'PCDH20', 'GABRB2', 'MASP2', 'TIFAB', 'PHKG1', 'DNAH11', 'KLK8', 'FOXN1', 'WFIKKN1', 'CD19', 'CLCA2', 'DCST2', 'ANK1', 'LINC00669', 'WNT10A', 'GPR171', 'FREM2', 'KCNB1', 'CRB2', 'C19ORF45', 'SLC26A3', 'UCA1', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'RASAL1', 'LINC00685', 'TYMSOS', 'RIC3', 'ANO2', 'CD1E', 'TTC41P', 'COLCA1', 'NEURL3', 'LOC646999', 'CST2', 'MED12L', 'HNRNPCL3', 'PCDHGC5', 'NRXN1', 'RAB3B', 'STXBP6', 'FAM182B', 'MYEOV', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'EYA1', 'ARHGEF33', 'CLPSL1', 'CR2', 'KIF4B', 'FNDC8', 'CXCR2', 'PATL2', 'AJAP1', 'ZNF676', 'VSTM2A', 'CLDN14', 'KCNRG', 'TDRD9', 'CLEC4F', 'LPAR4', 'MSLN', 'C9ORF117', 'MAGEL2', 'FAM43B', 'HAPLN1', 'NDP', 'VIT', 'PDCD1', 'DMRTC1B', 'TRABD2A', 'ABHD1', 'MKX', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.151627095174617e-15 NRMSE: 7.574205948509055e-16 MAPE: 1.1355356818294343e-11 Pearson Correlation: 0.213212165768622 Spearman Correlation: 0.25383109515081237 Coefficient of Determination: -1.1063403726447052 RMSE: 0.6247198574280721 NRMSE: 0.23295752209542195 MAPE: 1363.2620538075867 Predictor: ElasticNet Pearson Correlation: 0.8162035634081356 Spearman Correlation: 0.7449402080013519 Coefficient of Determination: 0.6048933547125298 RMSE: 0.28292969801700524 NRMSE: 0.06799560154217862 MAPE: 602.4712726203538 Pearson Correlation: 0.39638679178435793 Spearman Correlation: 0.4138430653748801 Coefficient of Determination: 0.1387358969778002 RMSE: 0.3994746343617513 NRMSE: 0.14896376328425406 MAPE: 638.5195699912244 Predictor: RandomForests Pearson Correlation: 0.48894740388311264 Spearman Correlation: 0.5397435764554679 Coefficient of Determination: 0.2278051530212729 RMSE: 0.3955349082628979 NRMSE: 0.09505765639579378 MAPE: 770.6118716941512 Pearson Correlation: 0.3664038459129452 Spearman Correlation: 0.4476938615194704 Coefficient of Determination: 0.11717119042064406 RMSE: 0.4044448253874385 NRMSE: 0.1508171434384431 MAPE: 386.6439988052067 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'LINC01119', 'IQUB', 'CBLN4', 'LINC01341', 'ECT2L', 'SOX8', 'PAX2', 'EYS', 'NKPD1', 'ETV2', 'FXYD1', 'RNF138P1', 'MYCBPAP', 'TEKT3', 'XPNPEP2', 'CCR8', 'PPP1R3G', 'CCIN', 'STKLD1', 'C19ORF18', 'SLC30A8', 'UGT8', 'SLC28A3', 'JPH4', 'PLP1', 'UBE2Q2P1', 'SLC25A18', 'METTL7B', 'HEPACAM2', 'TEX14', 'IDI2.AS1', 'CASQ1', 'LINC00482', 'S100A3', 'ALOXE3', 'GLIS1', 'SGK2', 'NR1I3', 'CCDC36', 'PBX4', 'ZNF843', 'LRIT3', 'WNT2B', 'CACNG1', 'MS4A15', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'LPAR3', 'AOC2', 'TNNI3K', 'BCHE', 'GJB1', 'C9ORF43', 'PITX2', 'FCRL6', 'CCDC151', 'PNCK', 'CKMT2', 'FAM189A1', 'DQX1', 'ABCA17P', 'CACNA1G', 'C1ORF101', 'ENPP6', 'NLRP12', 'C2ORF50', 'ADCYAP1', 'CLDN9', 'FAM90A1', 'SLC6A20', 'IYD', 'SPIB', 'FAM95B1', 'CA3', 'OTOA', 'ZNF835', 'PCDH9', 'C2CD4A', 'C1ORF95', 'RYR2', 'LINC01550', 'ZCCHC18', 'CLEC3A', 'VSIG1', 'AURKC', 'ULBP3', 'CLECL1', 'CCDC158', 'CCDC65', 'IL20RB', 'ARC', 'GSDMC', 'TAS1R3', 'DDX11L2', 'SCN2B', 'TTC16', 'PCSK1N', 'SVOPL', 'ALDH8A1', 'BPIFB2', 'CRYGS', 'MYOZ1', 'COLCA2', 'GSTM1', 'PDE1C', 'KNDC1', 'DUOXA1', 'B3GALT5.AS1', 'PCYT1B', 'IL22RA1', 'LOC148709', 'KLHL4', 'PPP1R36', 'HOXD3', 'TARP', 'FAM57B', 'OR7E91P', 'CAMP', 'LOC90768', 'LOC441455', 'JPH3', 'CPEB1', 'LUZP2', 'FLJ37201', 'IL12RB2', 'RELN', 'FUT7', 'LBX2', 'SCARA5', 'RIMS1', 'PLA2G5', 'GPR18', 'MNX1', 'ZBED3.AS1', 'HIST1H2BN', 'SLC22A18AS', 'HOXB13', 'KCNE1', 'CD177', 'TUBB8', 'ZC3H12D', 'IGSF5', 'ASTN1', 'CIDEA', 'TCHH', 'KCNE2', 'ONECUT2', 'IRX4', 'C10ORF128', 'GAL', 'WDR72', 'CHRNA6', 'SP5', 'BTBD8', 'FAM135B', 'SLC16A10', 'SCN7A', 'MGC16142', 'HOXB8', 'SCART1', 'LINC01124', 'RSPH4A', 'CCDC183', 'ALB', 'YPEL4', 'GBP1P1', 'CCDC7', 'DCSTAMP', 'GRIN2C', 'CELF5', 'MGAT5B', 'CXXC4', 'SLC35F1', 'GPR3', 'CXCR5', 'HOXA11', 'PYDC1', 'CCDC153', 'OBP2B', 'SLC30A2', 'ATP13A5', 'NIPAL1', 'SKIDA1', 'SRL', 'FOXJ1', 'PCSK9', 'LRP1B', 'RPGRIP1', 'WT1', 'TNFRSF9', 'PCAT18', 'STRC', 'SLC18A2', 'INSM1', 'NOXO1', 'CNNM1', 'GPR174', 'PCK1', 'MARCO', 'GPX2', 'FOXD4', 'SLC25A53', 'PPP4R4', 'DMRT3', 'C17ORF104', 'IL20', 'LBP', 'CRISP3', 'KLHL14', 'FOXD1', 'NOS2', 'PKNOX2', 'INHA', 'COL23A1', 'TNFRSF17', 'BTLA', 'AVPR2', 'ADH1C', 'GPLD1', 'PARP15', 'CXCL2', 'MYBPC1', 'GLOD5', 'CST9', 'GPR55', 'SLCO4C1', 'PFN1P2', 'BCL2L14', 'STEAP1B', 'C2ORF40', 'SLC23A1', 'ULBP2', 'VSIG2', 'SCN3A', 'AMH', 'VAT1L', 'CXCR2P1', 'ZNF98', 'DHRS4L1', 'CYSLTR2', 'ZNF454', 'RNF212', 'HAP1', 'TPSG1', 'VGLL1', 'FAM178B', 'FAM218A', 'P2RX1', 'ORM1', 'DBIL5P', 'TMEM105', 'DKK1', 'SYN2', 'EMILIN3', 'ZNF488', 'IL23A', 'SIGLEC17P', 'CRYM', 'AMBP', 'DPY19L2P2', 'PRKG2', 'CXCL1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'CTCFL', 'LRRC2', 'FABP7', 'GPBAR1', 'BRINP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'BDKRB1', 'XIRP1', 'TENM1', 'FUT6', 'LINC00930', 'RERGL', 'BMPER', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'RDM1', 'CECR2', 'CLEC12A', 'HCG27', 'ABHD11.AS1', 'FAM184B', 'PKD1L1', 'PCDHGA3', 'SORCS1', 'SEC14L5', 'WSCD2', 'SSUH2', 'CBLN2', 'ECEL1', 'SPESP1', 'FSCN2', 'CCL17', 'DMRT2', 'ZNF732', 'FAM162B', 'GRIA3', 'TMEM217', 'RSPO1', 'GNB3', 'CTSG', 'RGS6', 'HOXD4', 'PIANP', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'RNF175', 'IL1R2', 'ADAMTS19', 'SERPINA6', 'MT1A', 'RASL10A', 'DIRC3', 'PRSS21', 'HECTD2.AS1', 'PFKFB1', 'POM121L9P', 'CYP46A1', 'LRRC16B', 'SMIM5', 'CAPN11', 'FOXC2', 'ZNF804A', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'VIPR2', 'CYSRT1', 'GPR87', 'IGF2BP3', 'XKR9', 'EMX1', 'SLC26A10', 'HOGA1', 'CA9', 'CEP83.AS1', 'HS3ST3B1', 'SLC13A2', 'HTR7', 'WIPF3', 'ULBP1', 'ZSCAN1', 'ZBTB16', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CYP26A1', 'CITED1', 'ROPN1L', 'MAPT.IT1', 'ANKK1', 'WFDC3', 'GZMM', 'M1AP', 'PVALB', 'FIRRE', 'CDHR1', 'MYO3B', 'IGSF22', 'MRAP2', 'SPAG17', 'INE2', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'CRTAC1', 'MROH7', 'PYGM', 'BTC', 'PCDHA12', 'CFAP61', 'KCNT2', 'HEATR4', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'CLEC4E', 'MIA', 'OPCML', 'ADGRF1', 'LRRC4B', 'NWD1', 'SRSF12', 'B3GAT1', 'CCBE1', 'CIDEC', 'HPDL', 'LINC00173', 'TMEM59L', 'IL11', 'LSAMP', 'RNF182', 'TSPAN8', 'GAS2', 'FASLG', 'KCNA6', 'LOC613037', 'KLK6', 'GALNT13', 'ABCC6P2', 'DHDH', 'NLRP7', 'SMC1B', 'FRMPD1', 'SCN3B', 'RFPL1S', 'C15ORF56', 'COL28A1', 'FAM83A', 'SLC16A11', 'PSORS1C1', 'PTCHD1', 'SLC24A5', 'TUSC5', 'C9ORF47', 'ADGRG2', 'ANO5', 'SLC6A14', 'TMPRSS4', 'RUFY4', 'INTS4P2', 'IGSF1', 'KCNQ3', 'PIK3C2G', 'LOC100133669', 'CYP4F12', 'LINC00908', 'NBPF4', 'MYOM2', 'EBF2', 'VENTX', 'FAM157A', 'DSCAML1', 'PCDHA5', 'PTPRN', 'MAG', 'PLAC1', 'DLX5', 'CCNI2', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'CNTN2', 'FAM19A2', 'KLK7', 'ZBTB20', 'NKX3.2', 'SFTPA2', 'BRE.AS1', 'SLC6A17', 'OR2W3', 'PTPRR', 'RYR3', 'GHRLOS', 'ABCC2', 'TFAP2E', 'ABCD2', 'CD160', 'CD1A', 'GRIA2', 'RGS9', 'CCDC144A', 'DEFB1', 'CDKL2', 'DCX', 'DLK2', 'CACNA1I', 'PWAR5', 'GGT3P', 'MYO16', 'SLC6A11', 'WDR17', 'MSMB', 'CHRFAM7A', 'BTBD19', 'MMP12', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'AGBL4', 'SLC39A2', 'LY6H', 'XCL2', 'SPAG8', 'TUBAL3', 'S100A7', 'P2RY12', 'PCBP3', 'SNORD116.4', 'KCNH3', 'LINC00202.1', 'ZNF727', 'ARL9', 'TM6SF2', 'MAK', 'GRID2IP', 'MPL', 'HRCT1', 'TCN1', 'ELOVL3', 'SLC46A2', 'SYCE3', 'CD70', 'TCTEX1D1', 'NOX5', 'GPM6A', 'GRIN2A', 'PGLYRP2', 'TIGD4', 'SYCE2', 'ARMC3', 'JAKMIP1', 'RAB9B', 'MKRN3', 'CTAGE6', 'BAIAP2L2', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'LONRF3', 'AGAP7P', 'ACY3', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'KLK10', 'SCN9A', 'ACHE', 'AKR1E2', 'SCN2A', 'PRPH2', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'HRC', 'GPR82', 'PAH', 'LOC285593', 'CHODL', 'TTBK1', 'CXADRP3', 'MLLT4.AS1', 'TTYH1', 'CHST9', 'ADGRL3', 'APOBEC3A', 'GABRB3', 'SLC25A34', 'HIST1H2BH', 'TRH', 'BRSK2', 'MAPK4', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'DGCR5', 'CAMK4', 'EPYC', 'MUC15', 'GBP6', 'GPR63', 'ANKLE1', 'CAPSL', 'IL17D', 'ROBO2', 'SLC35F3', 'AIM1L', 'ASGR1', 'HAMP', 'TNFSF11', 'RMRP', 'FAM201A', 'PCDHA1', 'MYO15A', 'FAM159A', 'CHKB.AS1', 'DUSP9', 'NMU', 'PTX3', 'DCLK3', 'NEK5', 'RHCE', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'LOC100132215', 'RUNDC3A', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'LINC00961', 'CYP2E1', 'RRN3P1', 'FOLR1', 'PNMA6A', 'ROPN1B', 'SIGLEC6', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'ADRA2B', 'THSD7B', 'SLC2A14', 'ATP13A4', 'MT1L', 'DPEP1', 'KISS1R', 'KIF19', 'TMEM150B', 'IL1RL1', 'ZMAT4', 'CCR10', 'IL24', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'LIN7A', 'TTLL9', 'WBP2NL', 'RHBG', 'A2ML1', 'PRRT4', 'KIAA1210', 'NIPAL4', 'GPR135', 'LOC90246', 'GNMT', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'FIGF', 'OXGR1', 'CBLN1', 'B3GALT5', 'PCDHB18P', 'RRAD', 'MAP7D2', 'DPF3', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'SLC5A8', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PON3', 'PCDH20', 'GABRB2', 'MASP2', 'TIFAB', 'PHKG1', 'DNAH11', 'KLK8', 'FOXN1', 'WFIKKN1', 'CD19', 'CLCA2', 'DCST2', 'ANK1', 'LINC00669', 'WNT10A', 'GPR171', 'FREM2', 'KCNB1', 'CRB2', 'C19ORF45', 'SLC26A3', 'UCA1', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'RASAL1', 'LINC00685', 'TYMSOS', 'RIC3', 'ANO2', 'CD1E', 'TTC41P', 'COLCA1', 'NEURL3', 'LOC646999', 'CST2', 'MED12L', 'HNRNPCL3', 'PCDHGC5', 'NRXN1', 'RAB3B', 'STXBP6', 'FAM182B', 'MYEOV', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'EYA1', 'ARHGEF33', 'CLPSL1', 'CR2', 'KIF4B', 'FNDC8', 'CXCR2', 'PATL2', 'AJAP1', 'ZNF676', 'VSTM2A', 'CLDN14', 'KCNRG', 'TDRD9', 'CLEC4F', 'LPAR4', 'MSLN', 'C9ORF117', 'MAGEL2', 'FAM43B', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.699103592597292e-15 NRMSE: 7.275970874502935e-16 MAPE: 2.49294914457845e-12 Pearson Correlation: 0.17950211567816107 Spearman Correlation: 0.1722989064701555 Coefficient of Determination: -1.2063122254019292 RMSE: 0.9104853632604664 NRMSE: 0.2976512351696578 MAPE: 2697.4019773319187 Predictor: ElasticNet Pearson Correlation: 0.893847270518569 Spearman Correlation: 0.884598226636153 Coefficient of Determination: 0.7510004428711053 RMSE: 0.38382841063137635 NRMSE: 0.0754973270321354 MAPE: 212.22485349022358 Pearson Correlation: 0.20637663074686902 Spearman Correlation: 0.19646878390004865 Coefficient of Determination: -0.23845001141334765 RMSE: 0.6821481781664878 NRMSE: 0.2230044062135041 MAPE: 1595.7478384684982 Predictor: RandomForests Pearson Correlation: 0.5353190449417706 Spearman Correlation: 0.5580549637681219 Coefficient of Determination: 0.2511654006011921 RMSE: 0.6656267724663083 NRMSE: 0.13092580103585924 MAPE: 295.9630882855158 Pearson Correlation: 0.15527456895114067 Spearman Correlation: 0.17101709497624662 Coefficient of Determination: -0.06919743172240156 RMSE: 0.6338236444592873 NRMSE: 0.20720639591333068 MAPE: 1956.2125943402768 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'LINC01119', 'IQUB', 'CBLN4', 'LINC01341', 'ECT2L', 'SOX8', 'PAX2', 'EYS', 'NKPD1', 'ETV2', 'FXYD1', 'RNF138P1', 'MYCBPAP', 'TEKT3', 'XPNPEP2', 'CCR8', 'PPP1R3G', 'CCIN', 'STKLD1', 'C19ORF18', 'SLC30A8', 'UGT8', 'SLC28A3', 'JPH4', 'PLP1', 'UBE2Q2P1', 'SLC25A18', 'METTL7B', 'HEPACAM2', 'TEX14', 'IDI2.AS1', 'CASQ1', 'LINC00482', 'S100A3', 'ALOXE3', 'GLIS1', 'SGK2', 'NR1I3', 'CCDC36', 'PBX4', 'ZNF843', 'LRIT3', 'WNT2B', 'CACNG1', 'MS4A15', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'LPAR3', 'AOC2', 'TNNI3K', 'BCHE', 'GJB1', 'C9ORF43', 'PITX2', 'FCRL6', 'CCDC151', 'PNCK', 'CKMT2', 'FAM189A1', 'DQX1', 'ABCA17P', 'CACNA1G', 'C1ORF101', 'ENPP6', 'NLRP12', 'C2ORF50', 'ADCYAP1', 'CLDN9', 'FAM90A1', 'SLC6A20', 'IYD', 'SPIB', 'FAM95B1', 'CA3', 'OTOA', 'ZNF835', 'PCDH9', 'C2CD4A', 'C1ORF95', 'RYR2', 'LINC01550', 'ZCCHC18', 'CLEC3A', 'VSIG1', 'AURKC', 'ULBP3', 'CLECL1', 'CCDC158', 'CCDC65', 'IL20RB', 'ARC', 'GSDMC', 'TAS1R3', 'DDX11L2', 'SCN2B', 'TTC16', 'PCSK1N', 'SVOPL', 'ALDH8A1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.897594447884323 Spearman Correlation: 0.7908412807059857 Coefficient of Determination: 0.8056757928727626 RMSE: 0.23029564476244133 NRMSE: 0.05557729680296385 MAPE: 39.53853391349215 Pearson Correlation: 0.36218125027704634 Spearman Correlation: 0.37224653673985963 Coefficient of Determination: -1.300358062466504 RMSE: 0.553424083420223 NRMSE: 0.24106986253440038 MAPE: 159.0299732720448 Predictor: ElasticNet Pearson Correlation: 0.7830785890018894 Spearman Correlation: 0.6983319345757107 Coefficient of Determination: 0.596968703751739 RMSE: 0.33165890180453284 NRMSE: 0.08003931312704415 MAPE: 54.93919857008691 Pearson Correlation: 0.5111744580568175 Spearman Correlation: 0.4485866407311812 Coefficient of Determination: 0.1281245015717164 RMSE: 0.3407121102345742 NRMSE: 0.1484131681990566 MAPE: 94.32653925388317 Predictor: RandomForests Pearson Correlation: 0.6326666757723072 Spearman Correlation: 0.6085055001983019 Coefficient of Determination: 0.35611668081665826 RMSE: 0.41920442642133876 NRMSE: 0.10116669315378497 MAPE: 70.01794077756193 Pearson Correlation: 0.4323543640997513 Spearman Correlation: 0.3974538335889475 Coefficient of Determination: 0.16591938782562377 RMSE: 0.33324554090354513 NRMSE: 0.14516075310517276 MAPE: 101.38069842206683 Protein: CCND1 x_train_column_count: 859 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'LINC01119', 'IQUB', 'CBLN4', 'LINC01341', 'ECT2L', 'SOX8', 'PAX2', 'EYS', 'NKPD1', 'ETV2', 'FXYD1', 'RNF138P1', 'MYCBPAP', 'TEKT3', 'XPNPEP2', 'CCR8', 'PPP1R3G', 'CCIN', 'STKLD1', 'C19ORF18', 'SLC30A8', 'UGT8', 'SLC28A3', 'JPH4', 'PLP1', 'UBE2Q2P1', 'SLC25A18', 'METTL7B', 'HEPACAM2', 'TEX14', 'IDI2.AS1', 'CASQ1', 'LINC00482', 'S100A3', 'ALOXE3', 'GLIS1', 'SGK2', 'NR1I3', 'CCDC36', 'PBX4', 'ZNF843', 'LRIT3', 'WNT2B', 'CACNG1', 'MS4A15', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'LPAR3', 'AOC2', 'TNNI3K', 'BCHE', 'GJB1', 'C9ORF43', 'PITX2', 'FCRL6', 'CCDC151', 'PNCK', 'CKMT2', 'FAM189A1', 'DQX1', 'ABCA17P', 'CACNA1G', 'C1ORF101', 'ENPP6', 'NLRP12', 'C2ORF50', 'ADCYAP1', 'CLDN9', 'FAM90A1', 'SLC6A20', 'IYD', 'SPIB', 'FAM95B1', 'CA3', 'OTOA', 'ZNF835', 'PCDH9', 'C2CD4A', 'C1ORF95', 'RYR2', 'LINC01550', 'ZCCHC18', 'CLEC3A', 'VSIG1', 'AURKC', 'ULBP3', 'CLECL1', 'CCDC158', 'CCDC65', 'IL20RB', 'ARC', 'GSDMC', 'TAS1R3', 'DDX11L2', 'SCN2B', 'TTC16', 'PCSK1N', 'SVOPL', 'ALDH8A1', 'BPIFB2', 'CRYGS', 'MYOZ1', 'COLCA2', 'GSTM1', 'PDE1C', 'KNDC1', 'DUOXA1', 'B3GALT5.AS1', 'PCYT1B', 'IL22RA1', 'LOC148709', 'KLHL4', 'PPP1R36', 'HOXD3', 'TARP', 'FAM57B', 'OR7E91P', 'CAMP', 'LOC90768', 'LOC441455', 'JPH3', 'CPEB1', 'LUZP2', 'FLJ37201', 'IL12RB2', 'RELN', 'FUT7', 'LBX2', 'SCARA5', 'RIMS1', 'PLA2G5', 'GPR18', 'MNX1', 'ZBED3.AS1', 'HIST1H2BN', 'SLC22A18AS', 'HOXB13', 'KCNE1', 'CD177', 'TUBB8', 'ZC3H12D', 'IGSF5', 'ASTN1', 'CIDEA', 'TCHH', 'KCNE2', 'ONECUT2', 'IRX4', 'C10ORF128', 'GAL', 'WDR72', 'CHRNA6', 'SP5', 'BTBD8', 'FAM135B', 'SLC16A10', 'SCN7A', 'MGC16142', 'HOXB8', 'SCART1', 'LINC01124', 'RSPH4A', 'CCDC183', 'ALB', 'YPEL4', 'GBP1P1', 'CCDC7', 'DCSTAMP', 'GRIN2C', 'CELF5', 'MGAT5B', 'CXXC4', 'SLC35F1', 'GPR3', 'CXCR5', 'HOXA11', 'PYDC1', 'CCDC153', 'OBP2B', 'SLC30A2', 'ATP13A5', 'NIPAL1', 'SKIDA1', 'SRL', 'FOXJ1', 'PCSK9', 'LRP1B', 'RPGRIP1', 'WT1', 'TNFRSF9', 'PCAT18', 'STRC', 'SLC18A2', 'INSM1', 'NOXO1', 'CNNM1', 'GPR174', 'PCK1', 'MARCO', 'GPX2', 'FOXD4', 'SLC25A53', 'PPP4R4', 'DMRT3', 'C17ORF104', 'IL20', 'LBP', 'CRISP3', 'KLHL14', 'FOXD1', 'NOS2', 'PKNOX2', 'INHA', 'COL23A1', 'TNFRSF17', 'BTLA', 'AVPR2', 'ADH1C', 'GPLD1', 'PARP15', 'CXCL2', 'MYBPC1', 'GLOD5', 'CST9', 'GPR55', 'SLCO4C1', 'PFN1P2', 'BCL2L14', 'STEAP1B', 'C2ORF40', 'SLC23A1', 'ULBP2', 'VSIG2', 'SCN3A', 'AMH', 'VAT1L', 'CXCR2P1', 'ZNF98', 'DHRS4L1', 'CYSLTR2', 'ZNF454', 'RNF212', 'HAP1', 'TPSG1', 'VGLL1', 'FAM178B', 'FAM218A', 'P2RX1', 'ORM1', 'DBIL5P', 'TMEM105', 'DKK1', 'SYN2', 'EMILIN3', 'ZNF488', 'IL23A', 'SIGLEC17P', 'CRYM', 'AMBP', 'DPY19L2P2', 'PRKG2', 'CXCL1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'CTCFL', 'LRRC2', 'FABP7', 'GPBAR1', 'BRINP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'BDKRB1', 'XIRP1', 'TENM1', 'FUT6', 'LINC00930', 'RERGL', 'BMPER', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'RDM1', 'CECR2', 'CLEC12A', 'HCG27', 'ABHD11.AS1', 'FAM184B', 'PKD1L1', 'PCDHGA3', 'SORCS1', 'SEC14L5', 'WSCD2', 'SSUH2', 'CBLN2', 'ECEL1', 'SPESP1', 'FSCN2', 'CCL17', 'DMRT2', 'ZNF732', 'FAM162B', 'GRIA3', 'TMEM217', 'RSPO1', 'GNB3', 'CTSG', 'RGS6', 'HOXD4', 'PIANP', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'RNF175', 'IL1R2', 'ADAMTS19', 'SERPINA6', 'MT1A', 'RASL10A', 'DIRC3', 'PRSS21', 'HECTD2.AS1', 'PFKFB1', 'POM121L9P', 'CYP46A1', 'LRRC16B', 'SMIM5', 'CAPN11', 'FOXC2', 'ZNF804A', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'VIPR2', 'CYSRT1', 'GPR87', 'IGF2BP3', 'XKR9', 'EMX1', 'SLC26A10', 'HOGA1', 'CA9', 'CEP83.AS1', 'HS3ST3B1', 'SLC13A2', 'HTR7', 'WIPF3', 'ULBP1', 'ZSCAN1', 'ZBTB16', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CYP26A1', 'CITED1', 'ROPN1L', 'MAPT.IT1', 'ANKK1', 'WFDC3', 'GZMM', 'M1AP', 'PVALB', 'FIRRE', 'CDHR1', 'MYO3B', 'IGSF22', 'MRAP2', 'SPAG17', 'INE2', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'CRTAC1', 'MROH7', 'PYGM', 'BTC', 'PCDHA12', 'CFAP61', 'KCNT2', 'HEATR4', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'CLEC4E', 'MIA', 'OPCML', 'ADGRF1', 'LRRC4B', 'NWD1', 'SRSF12', 'B3GAT1', 'CCBE1', 'CIDEC', 'HPDL', 'LINC00173', 'TMEM59L', 'IL11', 'LSAMP', 'RNF182', 'TSPAN8', 'GAS2', 'FASLG', 'KCNA6', 'LOC613037', 'KLK6', 'GALNT13', 'ABCC6P2', 'DHDH', 'NLRP7', 'SMC1B', 'FRMPD1', 'SCN3B', 'RFPL1S', 'C15ORF56', 'COL28A1', 'FAM83A', 'SLC16A11', 'PSORS1C1', 'PTCHD1', 'SLC24A5', 'TUSC5', 'C9ORF47', 'ADGRG2', 'ANO5', 'SLC6A14', 'TMPRSS4', 'RUFY4', 'INTS4P2', 'IGSF1', 'KCNQ3', 'PIK3C2G', 'LOC100133669', 'CYP4F12', 'LINC00908', 'NBPF4', 'MYOM2', 'EBF2', 'VENTX', 'FAM157A', 'DSCAML1', 'PCDHA5', 'PTPRN', 'MAG', 'PLAC1', 'DLX5', 'CCNI2', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'CNTN2', 'FAM19A2', 'KLK7', 'ZBTB20', 'NKX3.2', 'SFTPA2', 'BRE.AS1', 'SLC6A17', 'OR2W3', 'PTPRR', 'RYR3', 'GHRLOS', 'ABCC2', 'TFAP2E', 'ABCD2', 'CD160', 'CD1A', 'GRIA2', 'RGS9', 'CCDC144A', 'DEFB1', 'CDKL2', 'DCX', 'DLK2', 'CACNA1I', 'PWAR5', 'GGT3P', 'MYO16', 'SLC6A11', 'WDR17', 'MSMB', 'CHRFAM7A', 'BTBD19', 'MMP12', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'AGBL4', 'SLC39A2', 'LY6H', 'XCL2', 'SPAG8', 'TUBAL3', 'S100A7', 'P2RY12', 'PCBP3', 'SNORD116.4', 'KCNH3', 'LINC00202.1', 'ZNF727', 'ARL9', 'TM6SF2', 'MAK', 'GRID2IP', 'MPL', 'HRCT1', 'TCN1', 'ELOVL3', 'SLC46A2', 'SYCE3', 'CD70', 'TCTEX1D1', 'NOX5', 'GPM6A', 'GRIN2A', 'PGLYRP2', 'TIGD4', 'SYCE2', 'ARMC3', 'JAKMIP1', 'RAB9B', 'MKRN3', 'CTAGE6', 'BAIAP2L2', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'LONRF3', 'AGAP7P', 'ACY3', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'KLK10', 'SCN9A', 'ACHE', 'AKR1E2', 'SCN2A', 'PRPH2', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'HRC', 'GPR82', 'PAH', 'LOC285593', 'CHODL', 'TTBK1', 'CXADRP3', 'MLLT4.AS1', 'TTYH1', 'CHST9', 'ADGRL3', 'APOBEC3A', 'GABRB3', 'SLC25A34', 'HIST1H2BH', 'TRH', 'BRSK2', 'MAPK4', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'DGCR5', 'CAMK4', 'EPYC', 'MUC15', 'GBP6', 'GPR63', 'ANKLE1', 'CAPSL', 'IL17D', 'ROBO2', 'SLC35F3', 'AIM1L', 'ASGR1', 'HAMP', 'TNFSF11', 'RMRP', 'FAM201A', 'PCDHA1', 'MYO15A', 'FAM159A', 'CHKB.AS1', 'DUSP9', 'NMU', 'PTX3', 'DCLK3', 'NEK5', 'RHCE', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.4981410205793727e-15 NRMSE: 9.006390572311098e-16 MAPE: 4.63846925442469e-12 Pearson Correlation: -0.024399307885429523 Spearman Correlation: -0.00561852392174466 Coefficient of Determination: -1.9643343581658113 RMSE: 0.3611137372242659 NRMSE: 0.3421808697035674 MAPE: 567.0046108870746 Predictor: ElasticNet Pearson Correlation: 0.6093504210886607 Spearman Correlation: 0.6047090536944724 Coefficient of Determination: 0.29691197523792123 RMSE: 0.2051452027834114 NRMSE: 0.1233273633738992 MAPE: 626.2410754591835 Pearson Correlation: 0.15620196821029927 Spearman Correlation: 0.18952106634746071 Coefficient of Determination: -0.013972513436459888 RMSE: 0.2111998022272684 NRMSE: 0.20012678709718132 MAPE: 280.3594467705005 Predictor: RandomForests Pearson Correlation: 0.5109126957280493 Spearman Correlation: 0.5234643252845385 Coefficient of Determination: 0.15961604340287505 RMSE: 0.22428250167916627 NRMSE: 0.13483215404357665 MAPE: 593.3229894652553 Pearson Correlation: 0.14265769250586197 Spearman Correlation: 0.13147046721280814 Coefficient of Determination: 0.01623158197393071 RMSE: 0.20803042394217067 NRMSE: 0.19712357645681508 MAPE: 425.2551984504275 Protein: ERBB2 x_train_column_count: 668 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'LINC01119', 'IQUB', 'CBLN4', 'LINC01341', 'ECT2L', 'SOX8', 'PAX2', 'EYS', 'NKPD1', 'ETV2', 'FXYD1', 'RNF138P1', 'MYCBPAP', 'TEKT3', 'XPNPEP2', 'CCR8', 'PPP1R3G', 'CCIN', 'STKLD1', 'C19ORF18', 'SLC30A8', 'UGT8', 'SLC28A3', 'JPH4', 'PLP1', 'UBE2Q2P1', 'SLC25A18', 'METTL7B', 'HEPACAM2', 'TEX14', 'IDI2.AS1', 'CASQ1', 'LINC00482', 'S100A3', 'ALOXE3', 'GLIS1', 'SGK2', 'NR1I3', 'CCDC36', 'PBX4', 'ZNF843', 'LRIT3', 'WNT2B', 'CACNG1', 'MS4A15', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'LPAR3', 'AOC2', 'TNNI3K', 'BCHE', 'GJB1', 'C9ORF43', 'PITX2', 'FCRL6', 'CCDC151', 'PNCK', 'CKMT2', 'FAM189A1', 'DQX1', 'ABCA17P', 'CACNA1G', 'C1ORF101', 'ENPP6', 'NLRP12', 'C2ORF50', 'ADCYAP1', 'CLDN9', 'FAM90A1', 'SLC6A20', 'IYD', 'SPIB', 'FAM95B1', 'CA3', 'OTOA', 'ZNF835', 'PCDH9', 'C2CD4A', 'C1ORF95', 'RYR2', 'LINC01550', 'ZCCHC18', 'CLEC3A', 'VSIG1', 'AURKC', 'ULBP3', 'CLECL1', 'CCDC158', 'CCDC65', 'IL20RB', 'ARC', 'GSDMC', 'TAS1R3', 'DDX11L2', 'SCN2B', 'TTC16', 'PCSK1N', 'SVOPL', 'ALDH8A1', 'BPIFB2', 'CRYGS', 'MYOZ1', 'COLCA2', 'GSTM1', 'PDE1C', 'KNDC1', 'DUOXA1', 'B3GALT5.AS1', 'PCYT1B', 'IL22RA1', 'LOC148709', 'KLHL4', 'PPP1R36', 'HOXD3', 'TARP', 'FAM57B', 'OR7E91P', 'CAMP', 'LOC90768', 'LOC441455', 'JPH3', 'CPEB1', 'LUZP2', 'FLJ37201', 'IL12RB2', 'RELN', 'FUT7', 'LBX2', 'SCARA5', 'RIMS1', 'PLA2G5', 'GPR18', 'MNX1', 'ZBED3.AS1', 'HIST1H2BN', 'SLC22A18AS', 'HOXB13', 'KCNE1', 'CD177', 'TUBB8', 'ZC3H12D', 'IGSF5', 'ASTN1', 'CIDEA', 'TCHH', 'KCNE2', 'ONECUT2', 'IRX4', 'C10ORF128', 'GAL', 'WDR72', 'CHRNA6', 'SP5', 'BTBD8', 'FAM135B', 'SLC16A10', 'SCN7A', 'MGC16142', 'HOXB8', 'SCART1', 'LINC01124', 'RSPH4A', 'CCDC183', 'ALB', 'YPEL4', 'GBP1P1', 'CCDC7', 'DCSTAMP', 'GRIN2C', 'CELF5', 'MGAT5B', 'CXXC4', 'SLC35F1', 'GPR3', 'CXCR5', 'HOXA11', 'PYDC1', 'CCDC153', 'OBP2B', 'SLC30A2', 'ATP13A5', 'NIPAL1', 'SKIDA1', 'SRL', 'FOXJ1', 'PCSK9', 'LRP1B', 'RPGRIP1', 'WT1', 'TNFRSF9', 'PCAT18', 'STRC', 'SLC18A2', 'INSM1', 'NOXO1', 'CNNM1', 'GPR174', 'PCK1', 'MARCO', 'GPX2', 'FOXD4', 'SLC25A53', 'PPP4R4', 'DMRT3', 'C17ORF104', 'IL20', 'LBP', 'CRISP3', 'KLHL14', 'FOXD1', 'NOS2', 'PKNOX2', 'INHA', 'COL23A1', 'TNFRSF17', 'BTLA', 'AVPR2', 'ADH1C', 'GPLD1', 'PARP15', 'CXCL2', 'MYBPC1', 'GLOD5', 'CST9', 'GPR55', 'SLCO4C1', 'PFN1P2', 'BCL2L14', 'STEAP1B', 'C2ORF40', 'SLC23A1', 'ULBP2', 'VSIG2', 'SCN3A', 'AMH', 'VAT1L', 'CXCR2P1', 'ZNF98', 'DHRS4L1', 'CYSLTR2', 'ZNF454', 'RNF212', 'HAP1', 'TPSG1', 'VGLL1', 'FAM178B', 'FAM218A', 'P2RX1', 'ORM1', 'DBIL5P', 'TMEM105', 'DKK1', 'SYN2', 'EMILIN3', 'ZNF488', 'IL23A', 'SIGLEC17P', 'CRYM', 'AMBP', 'DPY19L2P2', 'PRKG2', 'CXCL1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'CTCFL', 'LRRC2', 'FABP7', 'GPBAR1', 'BRINP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'BDKRB1', 'XIRP1', 'TENM1', 'FUT6', 'LINC00930', 'RERGL', 'BMPER', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'RDM1', 'CECR2', 'CLEC12A', 'HCG27', 'ABHD11.AS1', 'FAM184B', 'PKD1L1', 'PCDHGA3', 'SORCS1', 'SEC14L5', 'WSCD2', 'SSUH2', 'CBLN2', 'ECEL1', 'SPESP1', 'FSCN2', 'CCL17', 'DMRT2', 'ZNF732', 'FAM162B', 'GRIA3', 'TMEM217', 'RSPO1', 'GNB3', 'CTSG', 'RGS6', 'HOXD4', 'PIANP', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'RNF175', 'IL1R2', 'ADAMTS19', 'SERPINA6', 'MT1A', 'RASL10A', 'DIRC3', 'PRSS21', 'HECTD2.AS1', 'PFKFB1', 'POM121L9P', 'CYP46A1', 'LRRC16B', 'SMIM5', 'CAPN11', 'FOXC2', 'ZNF804A', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'VIPR2', 'CYSRT1', 'GPR87', 'IGF2BP3', 'XKR9', 'EMX1', 'SLC26A10', 'HOGA1', 'CA9', 'CEP83.AS1', 'HS3ST3B1', 'SLC13A2', 'HTR7', 'WIPF3', 'ULBP1', 'ZSCAN1', 'ZBTB16', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CYP26A1', 'CITED1', 'ROPN1L', 'MAPT.IT1', 'ANKK1', 'WFDC3', 'GZMM', 'M1AP', 'PVALB', 'FIRRE', 'CDHR1', 'MYO3B', 'IGSF22', 'MRAP2', 'SPAG17', 'INE2', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'CRTAC1', 'MROH7', 'PYGM', 'BTC', 'PCDHA12', 'CFAP61', 'KCNT2', 'HEATR4', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'CLEC4E', 'MIA', 'OPCML', 'ADGRF1', 'LRRC4B', 'NWD1', 'SRSF12', 'B3GAT1', 'CCBE1', 'CIDEC', 'HPDL', 'LINC00173', 'TMEM59L', 'IL11', 'LSAMP', 'RNF182', 'TSPAN8', 'GAS2', 'FASLG', 'KCNA6', 'LOC613037', 'KLK6', 'GALNT13', 'ABCC6P2', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 6.278994383940592e-15 NRMSE: 1.0697300345742698e-15 MAPE: 5.972289035344145e-12 Pearson Correlation: 0.31583293895326975 Spearman Correlation: 0.28012104904203755 Coefficient of Determination: -1.2841902738008333 RMSE: 1.6119209957391984 NRMSE: 0.29077151954311253 MAPE: 1240.7567531504974 Predictor: ElasticNet Pearson Correlation: 0.8971790914617978 Spearman Correlation: 0.8002976335883398 Coefficient of Determination: 0.7731175268396618 RMSE: 0.4673836467088039 NRMSE: 0.07962649653454246 MAPE: 551.5928524583496 Pearson Correlation: 0.6830924922418344 Spearman Correlation: 0.5736362967576334 Coefficient of Determination: 0.464001353900365 RMSE: 0.7808353374333538 NRMSE: 0.14085347742141457 MAPE: 479.4648932041901 Predictor: RandomForests Pearson Correlation: 0.5741461825703591 Spearman Correlation: 0.5400512642125956 Coefficient of Determination: 0.2667499174108834 RMSE: 0.8402317712547885 NRMSE: 0.1431473109792304 MAPE: 733.1360480469394 Pearson Correlation: 0.4355948341657177 Spearman Correlation: 0.435412455782151 Coefficient of Determination: 0.167975319024544 RMSE: 0.9728496294232368 NRMSE: 0.1754905890438049 MAPE: 222.8504715158235 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.7626515339829552 Spearman Correlation: 0.7641253052684583 Coefficient of Determination: 0.5816373622865547 RMSE: 0.29171395985446197 NRMSE: 0.10577509449483187 MAPE: 203.3519384577208 Pearson Correlation: 0.2533120003051703 Spearman Correlation: 0.24877367548223794 Coefficient of Determination: -0.20408905299108127 RMSE: 0.5428630855587594 NRMSE: 0.15093155920171247 MAPE: 215.2826013041756 Predictor: ElasticNet Pearson Correlation: 0.6354528059344409 Spearman Correlation: 0.6418271203611009 Coefficient of Determination: 0.3752963516282325 RMSE: 0.35646573298667245 NRMSE: 0.1292540014528141 MAPE: 184.61036634040522 Pearson Correlation: 0.32211156473702374 Spearman Correlation: 0.33278968565692846 Coefficient of Determination: 0.08708850023414139 RMSE: 0.4726888365661786 NRMSE: 0.13142109864910784 MAPE: 156.34949817819998 Predictor: RandomForests Pearson Correlation: 0.5335959039783829 Spearman Correlation: 0.5461977870633178 Coefficient of Determination: 0.21729848596906776 RMSE: 0.39900547349519216 NRMSE: 0.14467885487539012 MAPE: 211.45394891096143 Pearson Correlation: 0.26166145310698996 Spearman Correlation: 0.3033479220439158 Coefficient of Determination: 0.04553050545840076 RMSE: 0.4833280866555625 NRMSE: 0.1343791163287864 MAPE: 136.0016711735679 Fold: 4 Protein: RB1 x_train_column_count: 373 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'SLC28A3', 'PPP1R3G', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'HEPACAM2', 'METTL7B', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'ALOXE3', 'LRIT3', 'SGK2', 'GLIS1', 'ZNF843', 'S100A3', 'WNT2B', 'NR1I3', 'LINC00482', 'CCDC36', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'FCRL6', 'BCHE', 'CKMT2', 'DQX1', 'ABCA17P', 'FAM189A1', 'LPAR3', 'PITX2', 'NLRP12', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'C1ORF101', 'SLC6A20', 'FAM90A1', 'FAM95B1', 'ZNF835', 'CA3', 'CLDN9', 'OTOA', 'SPIB', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'PCSK1N', 'CLECL1', 'ULBP3', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'LINC01550', 'SCN2B', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'GSTM1', 'PCYT1B', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'CPEB1', 'JPH3', 'CAMP', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.859034407947005 Spearman Correlation: 0.7810447028709814 Coefficient of Determination: 0.7379401140368615 RMSE: 0.12875288787226152 NRMSE: 0.047086339918176394 MAPE: 374.80903743092205 Pearson Correlation: 0.24195858832409692 Spearman Correlation: 0.165520767091859 Coefficient of Determination: -3.5430485237630203 RMSE: 0.3514373003554138 NRMSE: 0.33671607361688366 MAPE: 641.4522138547052 Predictor: ElasticNet Pearson Correlation: 0.5270962381143124 Spearman Correlation: 0.4998997626090373 Coefficient of Determination: 0.21834661952315637 RMSE: 0.2223636582250932 NRMSE: 0.08132082293193871 MAPE: 297.3629102736258 Pearson Correlation: 0.16671582452983935 Spearman Correlation: 0.14186959937156324 Coefficient of Determination: -0.07784780950858727 RMSE: 0.17117994721482688 NRMSE: 0.1640094538907244 MAPE: 160.84191212664106 Predictor: RandomForests Pearson Correlation: 0.449697605819958 Spearman Correlation: 0.45466844426367586 Coefficient of Determination: 0.1310805696794516 RMSE: 0.2344479606707373 NRMSE: 0.08574018456361078 MAPE: 210.24648866997146 Pearson Correlation: 0.10659676950180799 Spearman Correlation: 0.0798987518547613 Coefficient of Determination: -0.05752259974529772 RMSE: 0.16955827710005233 NRMSE: 0.16245571331396574 MAPE: 121.44943807378317 Protein: CDH1 x_train_column_count: 836 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'SLC28A3', 'PPP1R3G', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'HEPACAM2', 'METTL7B', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'ALOXE3', 'LRIT3', 'SGK2', 'GLIS1', 'ZNF843', 'S100A3', 'WNT2B', 'NR1I3', 'LINC00482', 'CCDC36', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'FCRL6', 'BCHE', 'CKMT2', 'DQX1', 'ABCA17P', 'FAM189A1', 'LPAR3', 'PITX2', 'NLRP12', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'C1ORF101', 'SLC6A20', 'FAM90A1', 'FAM95B1', 'ZNF835', 'CA3', 'CLDN9', 'OTOA', 'SPIB', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'PCSK1N', 'CLECL1', 'ULBP3', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'LINC01550', 'SCN2B', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'GSTM1', 'PCYT1B', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'CPEB1', 'JPH3', 'CAMP', 'LOC441455', 'LOC90768', 'OR7E91P', 'FLJ37201', 'RELN', 'IL12RB2', 'SCARA5', 'LBX2', 'FUT7', 'PLA2G5', 'RIMS1', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'MNX1', 'HOXB13', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'WDR72', 'BTBD8', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'LINC01124', 'HOXB8', 'RSPH4A', 'MGC16142', 'CCDC183', 'ALB', 'SCART1', 'CELF5', 'GBP1P1', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'CCDC153', 'SKIDA1', 'NIPAL1', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'NOXO1', 'PPP4R4', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'CXCR2P1', 'ULBP2', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'ORM1', 'DBIL5P', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'BRINP1', 'CTCFL', 'VWDE', 'BDKRB1', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'CECR2', 'RDM1', 'HCG27', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'CLEC12A', 'PKD1L1', 'CBLN2', 'ECEL1', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'FAM184B', 'SORCS1', 'SPESP1', 'PCDHGA3', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'CHRNB2', 'COL2A1', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'TRAT1', 'GPR87', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'SLC13A2', 'CA9', 'WIPF3', 'EMX1', 'ZSCAN1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CITED1', 'MAPT.IT1', 'GZMM', 'WFDC3', 'FIRRE', 'ROPN1L', 'ANKK1', 'M1AP', 'PVALB', 'CDHR1', 'MYO3B', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'IGSF22', 'HEATR4', 'KCNT2', 'MROH7', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'MIA', 'CIDEC', 'SRSF12', 'CCBE1', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KLK6', 'KCNA6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'DHDH', 'SMC1B', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'ADGRG2', 'C9ORF47', 'TUSC5', 'TMPRSS4', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'FAM157A', 'VENTX', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'FAM19A2', 'CCNI2', 'DLX5', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'GHRLOS', 'CD160', 'PTPRR', 'ABCC2', 'OR2W3', 'RYR3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'CDKL2', 'MYO16', 'CACNA1I', 'PWAR5', 'DCX', 'DLK2', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'FKBP1AP1', 'UNC13A', 'SLC39A2', 'XCL2', 'AGBL4', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'P2RY12', 'HRCT1', 'PCBP3', 'LINC00202.1', 'TM6SF2', 'ZNF727', 'ARL9', 'KCNH3', 'SNORD116.4', 'MAK', 'MPL', 'GRID2IP', 'SLC46A2', 'TCTEX1D1', 'NOX5', 'SYCE3', 'CD70', 'GPM6A', 'ELOVL3', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'PGLYRP2', 'GRIN2A', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'AGAP7P', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'KLK10', 'SCN9A', 'SCN2A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'GABRB3', 'TTYH1', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'SLC35F3', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 5.532222347858845e-15 NRMSE: 8.808990713446776e-16 MAPE: 5.992815986072382e-12 Pearson Correlation: 0.3508914161998958 Spearman Correlation: 0.3006695844087832 Coefficient of Determination: -0.5638536521070951 RMSE: 1.4586903519852943 NRMSE: 0.2646294314403132 MAPE: 605.4812997920423 Predictor: ElasticNet Pearson Correlation: 0.9109853046700549 Spearman Correlation: 0.8764014980856641 Coefficient of Determination: 0.792102522950195 RMSE: 0.510221885197569 NRMSE: 0.08124293576598976 MAPE: 400.7672056768417 Pearson Correlation: 0.5248940933394558 Spearman Correlation: 0.5032606391600893 Coefficient of Determination: 0.26571090282214316 RMSE: 0.9995363577495973 NRMSE: 0.1813316566433724 MAPE: 449.0892572311752 Predictor: RandomForests Pearson Correlation: 0.6331870048343657 Spearman Correlation: 0.6117599720440282 Coefficient of Determination: 0.39495870657633925 RMSE: 0.8704162322146898 NRMSE: 0.1385968969482962 MAPE: 297.6488754968091 Pearson Correlation: 0.683382691079747 Spearman Correlation: 0.4860684048429532 Coefficient of Determination: 0.3968887500805849 RMSE: 0.9058656065377738 NRMSE: 0.16433830531144983 MAPE: 237.23144112745817 Protein: CDH2 x_train_column_count: 475 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'SLC28A3', 'PPP1R3G', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'HEPACAM2', 'METTL7B', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'ALOXE3', 'LRIT3', 'SGK2', 'GLIS1', 'ZNF843', 'S100A3', 'WNT2B', 'NR1I3', 'LINC00482', 'CCDC36', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'FCRL6', 'BCHE', 'CKMT2', 'DQX1', 'ABCA17P', 'FAM189A1', 'LPAR3', 'PITX2', 'NLRP12', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'C1ORF101', 'SLC6A20', 'FAM90A1', 'FAM95B1', 'ZNF835', 'CA3', 'CLDN9', 'OTOA', 'SPIB', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'PCSK1N', 'CLECL1', 'ULBP3', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'LINC01550', 'SCN2B', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'GSTM1', 'PCYT1B', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'CPEB1', 'JPH3', 'CAMP', 'LOC441455', 'LOC90768', 'OR7E91P', 'FLJ37201', 'RELN', 'IL12RB2', 'SCARA5', 'LBX2', 'FUT7', 'PLA2G5', 'RIMS1', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'MNX1', 'HOXB13', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'WDR72', 'BTBD8', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'LINC01124', 'HOXB8', 'RSPH4A', 'MGC16142', 'CCDC183', 'ALB', 'SCART1', 'CELF5', 'GBP1P1', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'CCDC153', 'SKIDA1', 'NIPAL1', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'NOXO1', 'PPP4R4', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.9504652350178416 Spearman Correlation: 0.9393905492834281 Coefficient of Determination: 0.9033841629775211 RMSE: 0.11791790213063962 NRMSE: 0.04272697374108255 MAPE: 2512.4648674384516 Pearson Correlation: 0.008963194514635791 Spearman Correlation: 0.058526914300677066 Coefficient of Determination: -6.811324287614291 RMSE: 0.9314395782137324 NRMSE: 0.48049996812643525 MAPE: 2302.5408953249644 Predictor: ElasticNet Pearson Correlation: 0.6724504555524821 Spearman Correlation: 0.67655964665729 Coefficient of Determination: 0.3577185810718182 RMSE: 0.30403127641337807 NRMSE: 0.11016424248618671 MAPE: 1576.7854014267916 Pearson Correlation: 0.18333758843056966 Spearman Correlation: 0.20743151410865476 Coefficient of Determination: -0.016355424313335032 RMSE: 0.3359813404851218 NRMSE: 0.17332205670686401 MAPE: 180.76587300727854 Predictor: RandomForests Pearson Correlation: 0.44800011541999146 Spearman Correlation: 0.47126219925095536 Coefficient of Determination: 0.12522717237632297 RMSE: 0.3548160248022239 NRMSE: 0.1285658470911747 MAPE: 1134.1425189434135 Pearson Correlation: 0.22023771585020777 Spearman Correlation: 0.24941707502587318 Coefficient of Determination: 0.014737354709762673 RMSE: 0.3308021797397345 NRMSE: 0.17065029287881975 MAPE: 165.0678421216959 Protein: CDH3 x_train_column_count: 76 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.552301126154792 Spearman Correlation: 0.5531835381184148 Coefficient of Determination: 0.3050365339518515 RMSE: 0.17165584084631183 NRMSE: 0.12233693063152061 MAPE: 396.14243349585666 Pearson Correlation: 0.3784934613576736 Spearman Correlation: 0.34233593935086476 Coefficient of Determination: 0.06572506374401554 RMSE: 0.2008514346808658 NRMSE: 0.1787666079364026 MAPE: 620.8632725547801 Predictor: ElasticNet Pearson Correlation: 0.4620729401658624 Spearman Correlation: 0.4732768019834945 Coefficient of Determination: 0.18742749049758822 RMSE: 0.1856131157563845 NRMSE: 0.1322841026243885 MAPE: 316.0222169380919 Pearson Correlation: 0.39303168038131603 Spearman Correlation: 0.36979264080599517 Coefficient of Determination: 0.08867374626187552 RMSE: 0.1983693316086125 NRMSE: 0.17655742706856228 MAPE: 354.759739809884 Predictor: RandomForests Pearson Correlation: 0.4268415649502355 Spearman Correlation: 0.44907215967333475 Coefficient of Determination: 0.16799238753077583 RMSE: 0.187819745713932 NRMSE: 0.13385673967952735 MAPE: 365.8512848396322 Pearson Correlation: 0.25454468546567743 Spearman Correlation: 0.25471389917580023 Coefficient of Determination: 0.006826783016147586 RMSE: 0.2070856897311906 NRMSE: 0.18431536903999018 MAPE: 295.54695778461337 Protein: PTEN x_train_column_count: 886 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'SLC28A3', 'PPP1R3G', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'HEPACAM2', 'METTL7B', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'ALOXE3', 'LRIT3', 'SGK2', 'GLIS1', 'ZNF843', 'S100A3', 'WNT2B', 'NR1I3', 'LINC00482', 'CCDC36', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'FCRL6', 'BCHE', 'CKMT2', 'DQX1', 'ABCA17P', 'FAM189A1', 'LPAR3', 'PITX2', 'NLRP12', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'C1ORF101', 'SLC6A20', 'FAM90A1', 'FAM95B1', 'ZNF835', 'CA3', 'CLDN9', 'OTOA', 'SPIB', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'PCSK1N', 'CLECL1', 'ULBP3', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'LINC01550', 'SCN2B', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'GSTM1', 'PCYT1B', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'CPEB1', 'JPH3', 'CAMP', 'LOC441455', 'LOC90768', 'OR7E91P', 'FLJ37201', 'RELN', 'IL12RB2', 'SCARA5', 'LBX2', 'FUT7', 'PLA2G5', 'RIMS1', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'MNX1', 'HOXB13', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'WDR72', 'BTBD8', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'LINC01124', 'HOXB8', 'RSPH4A', 'MGC16142', 'CCDC183', 'ALB', 'SCART1', 'CELF5', 'GBP1P1', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'CCDC153', 'SKIDA1', 'NIPAL1', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'NOXO1', 'PPP4R4', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'CXCR2P1', 'ULBP2', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'ORM1', 'DBIL5P', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'BRINP1', 'CTCFL', 'VWDE', 'BDKRB1', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'CECR2', 'RDM1', 'HCG27', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'CLEC12A', 'PKD1L1', 'CBLN2', 'ECEL1', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'FAM184B', 'SORCS1', 'SPESP1', 'PCDHGA3', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'CHRNB2', 'COL2A1', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'TRAT1', 'GPR87', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'SLC13A2', 'CA9', 'WIPF3', 'EMX1', 'ZSCAN1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CITED1', 'MAPT.IT1', 'GZMM', 'WFDC3', 'FIRRE', 'ROPN1L', 'ANKK1', 'M1AP', 'PVALB', 'CDHR1', 'MYO3B', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'IGSF22', 'HEATR4', 'KCNT2', 'MROH7', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'MIA', 'CIDEC', 'SRSF12', 'CCBE1', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KLK6', 'KCNA6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'DHDH', 'SMC1B', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'ADGRG2', 'C9ORF47', 'TUSC5', 'TMPRSS4', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'FAM157A', 'VENTX', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'FAM19A2', 'CCNI2', 'DLX5', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'GHRLOS', 'CD160', 'PTPRR', 'ABCC2', 'OR2W3', 'RYR3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'CDKL2', 'MYO16', 'CACNA1I', 'PWAR5', 'DCX', 'DLK2', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'FKBP1AP1', 'UNC13A', 'SLC39A2', 'XCL2', 'AGBL4', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'P2RY12', 'HRCT1', 'PCBP3', 'LINC00202.1', 'TM6SF2', 'ZNF727', 'ARL9', 'KCNH3', 'SNORD116.4', 'MAK', 'MPL', 'GRID2IP', 'SLC46A2', 'TCTEX1D1', 'NOX5', 'SYCE3', 'CD70', 'GPM6A', 'ELOVL3', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'PGLYRP2', 'GRIN2A', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'AGAP7P', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'KLK10', 'SCN9A', 'SCN2A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'GABRB3', 'TTYH1', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'SLC35F3', 'IL17D', 'GPR63', 'CAPSL', 'GBP6', 'MUC15', 'ANKLE1', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'FAM201A', 'HAMP', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'LOC100132215', 'MTUS2', 'RUNDC3A', 'RRN3P1', 'C1QL3', 'UCKL1.AS1', 'CYP2E1', 'CYTL1', 'FOLR1', 'PNMA6A', 'LINC00961', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'CCR10', 'KIF19', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.525284905063819e-15 NRMSE: 6.819260494165543e-16 MAPE: 8.354861403659982e-12 Pearson Correlation: 0.08174938605861225 Spearman Correlation: 0.040097756829885665 Coefficient of Determination: -0.9070535796365664 RMSE: 1.029605067297706 NRMSE: 0.1609889871468542 MAPE: 1119.4303343086951 Predictor: ElasticNet Pearson Correlation: 0.8238330260158006 Spearman Correlation: 0.7897425264962507 Coefficient of Determination: 0.6035140283490605 RMSE: 0.3537375674426109 NRMSE: 0.06842648704785881 MAPE: 192.73006998682825 Pearson Correlation: 0.15717010110788388 Spearman Correlation: 0.1247771169216574 Coefficient of Determination: -0.033028520045752074 RMSE: 0.7577839101040276 NRMSE: 0.11848704715878783 MAPE: 1805.3495120042228 Predictor: RandomForests Pearson Correlation: 0.5236978915670663 Spearman Correlation: 0.5171879865091992 Coefficient of Determination: 0.16611009961312573 RMSE: 0.5130050366544093 NRMSE: 0.09923495757010393 MAPE: 298.36073618244103 Pearson Correlation: 0.18300125125776087 Spearman Correlation: 0.19381039663836208 Coefficient of Determination: 0.02642758713016713 RMSE: 0.7356535811818057 NRMSE: 0.11502675024342204 MAPE: 698.6671501800251 Protein: BRCA2 x_train_column_count: 365 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'SLC28A3', 'PPP1R3G', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'HEPACAM2', 'METTL7B', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'ALOXE3', 'LRIT3', 'SGK2', 'GLIS1', 'ZNF843', 'S100A3', 'WNT2B', 'NR1I3', 'LINC00482', 'CCDC36', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'FCRL6', 'BCHE', 'CKMT2', 'DQX1', 'ABCA17P', 'FAM189A1', 'LPAR3', 'PITX2', 'NLRP12', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'C1ORF101', 'SLC6A20', 'FAM90A1', 'FAM95B1', 'ZNF835', 'CA3', 'CLDN9', 'OTOA', 'SPIB', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'PCSK1N', 'CLECL1', 'ULBP3', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'LINC01550', 'SCN2B', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'GSTM1', 'PCYT1B', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.8246519253593595 Spearman Correlation: 0.7809908972574584 Coefficient of Determination: 0.680050797998899 RMSE: 0.10848830675622745 NRMSE: 0.06989100129246413 MAPE: 229.12180912182004 Pearson Correlation: 0.13429218959254582 Spearman Correlation: 0.15829374431102633 Coefficient of Determination: -1.2352683245408862 RMSE: 0.3111374777567836 NRMSE: 0.3022777178466969 MAPE: 2102.040180316576 Predictor: ElasticNet Pearson Correlation: 0.44823959055444074 Spearman Correlation: 0.4308580995613418 Coefficient of Determination: 0.1431089133032235 RMSE: 0.17754368432833634 NRMSE: 0.11437827948354733 MAPE: 153.959640216959 Pearson Correlation: 0.3037378475477486 Spearman Correlation: 0.3505854187708077 Coefficient of Determination: 0.07616958892585513 RMSE: 0.20002469739222123 NRMSE: 0.19432891683965106 MAPE: 117.92834789904423 Predictor: RandomForests Pearson Correlation: 0.44718621684070464 Spearman Correlation: 0.4395124227909071 Coefficient of Determination: 0.1254628532786337 RMSE: 0.1793624575907806 NRMSE: 0.11554998073169953 MAPE: 132.9497270779262 Pearson Correlation: 0.26745694901989425 Spearman Correlation: 0.2805895335353309 Coefficient of Determination: 0.057021711405744746 RMSE: 0.20208698361914015 NRMSE: 0.19633247866934175 MAPE: 228.8710697743936 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'SLC28A3', 'PPP1R3G', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'HEPACAM2', 'METTL7B', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'ALOXE3', 'LRIT3', 'SGK2', 'GLIS1', 'ZNF843', 'S100A3', 'WNT2B', 'NR1I3', 'LINC00482', 'CCDC36', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'FCRL6', 'BCHE', 'CKMT2', 'DQX1', 'ABCA17P', 'FAM189A1', 'LPAR3', 'PITX2', 'NLRP12', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'C1ORF101', 'SLC6A20', 'FAM90A1', 'FAM95B1', 'ZNF835', 'CA3', 'CLDN9', 'OTOA', 'SPIB', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'PCSK1N', 'CLECL1', 'ULBP3', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'LINC01550', 'SCN2B', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'GSTM1', 'PCYT1B', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'CPEB1', 'JPH3', 'CAMP', 'LOC441455', 'LOC90768', 'OR7E91P', 'FLJ37201', 'RELN', 'IL12RB2', 'SCARA5', 'LBX2', 'FUT7', 'PLA2G5', 'RIMS1', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'MNX1', 'HOXB13', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'WDR72', 'BTBD8', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'LINC01124', 'HOXB8', 'RSPH4A', 'MGC16142', 'CCDC183', 'ALB', 'SCART1', 'CELF5', 'GBP1P1', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'CCDC153', 'SKIDA1', 'NIPAL1', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'NOXO1', 'PPP4R4', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'CXCR2P1', 'ULBP2', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'ORM1', 'DBIL5P', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'BRINP1', 'CTCFL', 'VWDE', 'BDKRB1', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'CECR2', 'RDM1', 'HCG27', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'CLEC12A', 'PKD1L1', 'CBLN2', 'ECEL1', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'FAM184B', 'SORCS1', 'SPESP1', 'PCDHGA3', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'CHRNB2', 'COL2A1', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'TRAT1', 'GPR87', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'SLC13A2', 'CA9', 'WIPF3', 'EMX1', 'ZSCAN1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CITED1', 'MAPT.IT1', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 7.516004409474805e-15 NRMSE: 1.6991080387645088e-15 MAPE: 9.510369111797122e-12 Pearson Correlation: 0.25852496627939764 Spearman Correlation: 0.245596578510954 Coefficient of Determination: -4.083996823780597 RMSE: 1.422029190703594 NRMSE: 0.42845109692786804 MAPE: 1303.9071827431521 Predictor: ElasticNet Pearson Correlation: 0.8111676632217065 Spearman Correlation: 0.7817608864445581 Coefficient of Determination: 0.6063675035950781 RMSE: 0.4228403111595345 NRMSE: 0.09558953569787147 MAPE: 358.2614376106212 Pearson Correlation: 0.45480639448764937 Spearman Correlation: 0.3846955697701967 Coefficient of Determination: 0.19321634818971556 RMSE: 0.5664797906210834 NRMSE: 0.17067785194970878 MAPE: 280.11198212447243 Predictor: RandomForests Pearson Correlation: 0.5520719223461276 Spearman Correlation: 0.5054430561157748 Coefficient of Determination: 0.2188369516326123 RMSE: 0.5956645537127597 NRMSE: 0.13465910562060804 MAPE: 250.6406167882033 Pearson Correlation: 0.4190648197158444 Spearman Correlation: 0.31169216573772746 Coefficient of Determination: 0.14897224845156476 RMSE: 0.581805386044397 NRMSE: 0.175295385973003 MAPE: 210.7159600156701 Protein: TP53 x_train_column_count: 1003 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'SLC28A3', 'PPP1R3G', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'HEPACAM2', 'METTL7B', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'ALOXE3', 'LRIT3', 'SGK2', 'GLIS1', 'ZNF843', 'S100A3', 'WNT2B', 'NR1I3', 'LINC00482', 'CCDC36', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'FCRL6', 'BCHE', 'CKMT2', 'DQX1', 'ABCA17P', 'FAM189A1', 'LPAR3', 'PITX2', 'NLRP12', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'C1ORF101', 'SLC6A20', 'FAM90A1', 'FAM95B1', 'ZNF835', 'CA3', 'CLDN9', 'OTOA', 'SPIB', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'PCSK1N', 'CLECL1', 'ULBP3', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'LINC01550', 'SCN2B', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'GSTM1', 'PCYT1B', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'CPEB1', 'JPH3', 'CAMP', 'LOC441455', 'LOC90768', 'OR7E91P', 'FLJ37201', 'RELN', 'IL12RB2', 'SCARA5', 'LBX2', 'FUT7', 'PLA2G5', 'RIMS1', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'MNX1', 'HOXB13', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'WDR72', 'BTBD8', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'LINC01124', 'HOXB8', 'RSPH4A', 'MGC16142', 'CCDC183', 'ALB', 'SCART1', 'CELF5', 'GBP1P1', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'CCDC153', 'SKIDA1', 'NIPAL1', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'NOXO1', 'PPP4R4', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'CXCR2P1', 'ULBP2', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'ORM1', 'DBIL5P', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'BRINP1', 'CTCFL', 'VWDE', 'BDKRB1', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'CECR2', 'RDM1', 'HCG27', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'CLEC12A', 'PKD1L1', 'CBLN2', 'ECEL1', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'FAM184B', 'SORCS1', 'SPESP1', 'PCDHGA3', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'CHRNB2', 'COL2A1', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'TRAT1', 'GPR87', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'SLC13A2', 'CA9', 'WIPF3', 'EMX1', 'ZSCAN1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CITED1', 'MAPT.IT1', 'GZMM', 'WFDC3', 'FIRRE', 'ROPN1L', 'ANKK1', 'M1AP', 'PVALB', 'CDHR1', 'MYO3B', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'IGSF22', 'HEATR4', 'KCNT2', 'MROH7', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'MIA', 'CIDEC', 'SRSF12', 'CCBE1', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KLK6', 'KCNA6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'DHDH', 'SMC1B', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'ADGRG2', 'C9ORF47', 'TUSC5', 'TMPRSS4', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'FAM157A', 'VENTX', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'FAM19A2', 'CCNI2', 'DLX5', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'GHRLOS', 'CD160', 'PTPRR', 'ABCC2', 'OR2W3', 'RYR3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'CDKL2', 'MYO16', 'CACNA1I', 'PWAR5', 'DCX', 'DLK2', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'FKBP1AP1', 'UNC13A', 'SLC39A2', 'XCL2', 'AGBL4', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'P2RY12', 'HRCT1', 'PCBP3', 'LINC00202.1', 'TM6SF2', 'ZNF727', 'ARL9', 'KCNH3', 'SNORD116.4', 'MAK', 'MPL', 'GRID2IP', 'SLC46A2', 'TCTEX1D1', 'NOX5', 'SYCE3', 'CD70', 'GPM6A', 'ELOVL3', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'PGLYRP2', 'GRIN2A', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'AGAP7P', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'KLK10', 'SCN9A', 'SCN2A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'GABRB3', 'TTYH1', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'SLC35F3', 'IL17D', 'GPR63', 'CAPSL', 'GBP6', 'MUC15', 'ANKLE1', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'FAM201A', 'HAMP', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'LOC100132215', 'MTUS2', 'RUNDC3A', 'RRN3P1', 'C1QL3', 'UCKL1.AS1', 'CYP2E1', 'CYTL1', 'FOLR1', 'PNMA6A', 'LINC00961', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'CCR10', 'KIF19', 'DPEP1', 'IL1RL1', 'GLI1', 'KISS1R', 'IL24', 'ARRDC3.AS1', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'NIPAL4', 'KIAA1210', 'PRRT4', 'RHBG', 'WBP2NL', 'A2ML1', 'GPR135', 'LOC90246', 'CBLN1', 'GNMT', 'PCDHB18P', 'DPF3', 'IL18RAP', 'CD300LB', 'B3GALT5', 'MAP7D2', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'GABRB2', 'PCDH20', 'MASP2', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'GPR171', 'ANK1', 'CD19', 'CRB2', 'KCNB1', 'SLC26A3', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'MED12L', 'RIC3', 'CST2', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'SEC14L1P1', 'FAM182B', 'IL6', 'EYA1', 'NRXN1', 'MYEOV', 'MAPT.AS1', 'ARHGEF33', 'RAB3B', 'STXBP6', 'KCNRG', 'CXCR2', 'MSLN', 'CR2', 'KIF4B', 'PATL2', 'TDRD9', 'AJAP1', 'ZNF676', 'CLEC4F', 'LPAR4', 'VSTM2A', 'CLDN14', 'FNDC8', 'MAGEL2', 'TRABD2A', 'ABHD1', 'NDP', 'PDCD1', 'VIT', 'FAM43B', 'POU3F1', 'TSPAN32', 'SEZ6L', 'HAPLN1', 'C9ORF117', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 3.6106276650267034e-15 NRMSE: 8.677307534310751e-16 MAPE: 9.838287944575239e-12 Pearson Correlation: 0.16090486153464417 Spearman Correlation: 0.21221960373570742 Coefficient of Determination: -0.9494388047940692 RMSE: 0.6029063593411451 NRMSE: 0.19132595815598663 MAPE: 568.4137598586633 Predictor: ElasticNet Pearson Correlation: 0.7907315162129384 Spearman Correlation: 0.7413787991498683 Coefficient of Determination: 0.575919077951873 RMSE: 0.29312433137553606 NRMSE: 0.07044564560815575 MAPE: 771.7675063193515 Pearson Correlation: 0.35611051397423515 Spearman Correlation: 0.3136273519619946 Coefficient of Determination: 0.09993723662981902 RMSE: 0.40966745018987294 NRMSE: 0.13000363359668474 MAPE: 316.1715822793307 Predictor: RandomForests Pearson Correlation: 0.5384312437096184 Spearman Correlation: 0.563842675109649 Coefficient of Determination: 0.2565866080287805 RMSE: 0.3880991502335039 NRMSE: 0.09327064413206054 MAPE: 813.728936122638 Pearson Correlation: 0.36804535362074503 Spearman Correlation: 0.3259566827516553 Coefficient of Determination: 0.1312139783161077 RMSE: 0.40248664428681247 NRMSE: 0.12772488077139263 MAPE: 188.20302650525167 Protein: CTNNB1 x_train_column_count: 995 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'SLC28A3', 'PPP1R3G', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'HEPACAM2', 'METTL7B', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'ALOXE3', 'LRIT3', 'SGK2', 'GLIS1', 'ZNF843', 'S100A3', 'WNT2B', 'NR1I3', 'LINC00482', 'CCDC36', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'FCRL6', 'BCHE', 'CKMT2', 'DQX1', 'ABCA17P', 'FAM189A1', 'LPAR3', 'PITX2', 'NLRP12', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'C1ORF101', 'SLC6A20', 'FAM90A1', 'FAM95B1', 'ZNF835', 'CA3', 'CLDN9', 'OTOA', 'SPIB', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'PCSK1N', 'CLECL1', 'ULBP3', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'LINC01550', 'SCN2B', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'GSTM1', 'PCYT1B', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'CPEB1', 'JPH3', 'CAMP', 'LOC441455', 'LOC90768', 'OR7E91P', 'FLJ37201', 'RELN', 'IL12RB2', 'SCARA5', 'LBX2', 'FUT7', 'PLA2G5', 'RIMS1', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'MNX1', 'HOXB13', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'WDR72', 'BTBD8', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'LINC01124', 'HOXB8', 'RSPH4A', 'MGC16142', 'CCDC183', 'ALB', 'SCART1', 'CELF5', 'GBP1P1', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'CCDC153', 'SKIDA1', 'NIPAL1', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'NOXO1', 'PPP4R4', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'CXCR2P1', 'ULBP2', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'ORM1', 'DBIL5P', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'BRINP1', 'CTCFL', 'VWDE', 'BDKRB1', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'CECR2', 'RDM1', 'HCG27', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'CLEC12A', 'PKD1L1', 'CBLN2', 'ECEL1', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'FAM184B', 'SORCS1', 'SPESP1', 'PCDHGA3', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'CHRNB2', 'COL2A1', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'TRAT1', 'GPR87', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'SLC13A2', 'CA9', 'WIPF3', 'EMX1', 'ZSCAN1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CITED1', 'MAPT.IT1', 'GZMM', 'WFDC3', 'FIRRE', 'ROPN1L', 'ANKK1', 'M1AP', 'PVALB', 'CDHR1', 'MYO3B', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'IGSF22', 'HEATR4', 'KCNT2', 'MROH7', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'MIA', 'CIDEC', 'SRSF12', 'CCBE1', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KLK6', 'KCNA6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'DHDH', 'SMC1B', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'ADGRG2', 'C9ORF47', 'TUSC5', 'TMPRSS4', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'FAM157A', 'VENTX', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'FAM19A2', 'CCNI2', 'DLX5', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'GHRLOS', 'CD160', 'PTPRR', 'ABCC2', 'OR2W3', 'RYR3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'CDKL2', 'MYO16', 'CACNA1I', 'PWAR5', 'DCX', 'DLK2', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'FKBP1AP1', 'UNC13A', 'SLC39A2', 'XCL2', 'AGBL4', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'P2RY12', 'HRCT1', 'PCBP3', 'LINC00202.1', 'TM6SF2', 'ZNF727', 'ARL9', 'KCNH3', 'SNORD116.4', 'MAK', 'MPL', 'GRID2IP', 'SLC46A2', 'TCTEX1D1', 'NOX5', 'SYCE3', 'CD70', 'GPM6A', 'ELOVL3', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'PGLYRP2', 'GRIN2A', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'AGAP7P', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'KLK10', 'SCN9A', 'SCN2A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'GABRB3', 'TTYH1', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'SLC35F3', 'IL17D', 'GPR63', 'CAPSL', 'GBP6', 'MUC15', 'ANKLE1', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'FAM201A', 'HAMP', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'LOC100132215', 'MTUS2', 'RUNDC3A', 'RRN3P1', 'C1QL3', 'UCKL1.AS1', 'CYP2E1', 'CYTL1', 'FOLR1', 'PNMA6A', 'LINC00961', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'CCR10', 'KIF19', 'DPEP1', 'IL1RL1', 'GLI1', 'KISS1R', 'IL24', 'ARRDC3.AS1', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'NIPAL4', 'KIAA1210', 'PRRT4', 'RHBG', 'WBP2NL', 'A2ML1', 'GPR135', 'LOC90246', 'CBLN1', 'GNMT', 'PCDHB18P', 'DPF3', 'IL18RAP', 'CD300LB', 'B3GALT5', 'MAP7D2', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'GABRB2', 'PCDH20', 'MASP2', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'GPR171', 'ANK1', 'CD19', 'CRB2', 'KCNB1', 'SLC26A3', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'MED12L', 'RIC3', 'CST2', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'SEC14L1P1', 'FAM182B', 'IL6', 'EYA1', 'NRXN1', 'MYEOV', 'MAPT.AS1', 'ARHGEF33', 'RAB3B', 'STXBP6', 'KCNRG', 'CXCR2', 'MSLN', 'CR2', 'KIF4B', 'PATL2', 'TDRD9', 'AJAP1', 'ZNF676', 'CLEC4F', 'LPAR4', 'VSTM2A', 'CLDN14', 'FNDC8', 'MAGEL2', 'TRABD2A', 'ABHD1', 'NDP', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 4.520506782285215e-15 NRMSE: 1.0918043624493324e-15 MAPE: 2.575437928654003e-12 Pearson Correlation: 0.32854701506032175 Spearman Correlation: 0.294205663412262 Coefficient of Determination: -0.3346930754947226 RMSE: 0.927066724886807 NRMSE: 0.19490932740871392 MAPE: 887.1204272484524 Predictor: ElasticNet Pearson Correlation: 0.8726377119199304 Spearman Correlation: 0.8636731139624851 Coefficient of Determination: 0.7020999124984696 RMSE: 0.3882983596636953 NRMSE: 0.09378281317353283 MAPE: 255.7126441868563 Pearson Correlation: 0.40331805871289766 Spearman Correlation: 0.40040648885896335 Coefficient of Determination: 0.13365766832360926 RMSE: 0.7469044680440862 NRMSE: 0.1570314666647225 MAPE: 384.5959802820632 Predictor: RandomForests Pearson Correlation: 0.5097745906277034 Spearman Correlation: 0.5370604126339972 Coefficient of Determination: 0.2224610077000858 RMSE: 0.6273231712149495 NRMSE: 0.15151269713432267 MAPE: 650.8519249283903 Pearson Correlation: 0.27102088983870076 Spearman Correlation: 0.3178468559458347 Coefficient of Determination: -0.011048146415648441 RMSE: 0.8068749046116298 NRMSE: 0.16963983361610246 MAPE: 587.9297491491693 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'SLC28A3', 'PPP1R3G', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'HEPACAM2', 'METTL7B', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'ALOXE3', 'LRIT3', 'SGK2', 'GLIS1', 'ZNF843', 'S100A3', 'WNT2B', 'NR1I3', 'LINC00482', 'CCDC36', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'FCRL6', 'BCHE', 'CKMT2', 'DQX1', 'ABCA17P', 'FAM189A1', 'LPAR3', 'PITX2', 'NLRP12', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'C1ORF101', 'SLC6A20', 'FAM90A1', 'FAM95B1', 'ZNF835', 'CA3', 'CLDN9', 'OTOA', 'SPIB', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'PCSK1N', 'CLECL1', 'ULBP3', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'LINC01550', 'SCN2B', 'ALDH8A1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.8890355619865796 Spearman Correlation: 0.8012702695590159 Coefficient of Determination: 0.7903842304767936 RMSE: 0.2311186867738069 NRMSE: 0.055775921706158 MAPE: 42.60016810324696 Pearson Correlation: 0.3781214643397565 Spearman Correlation: 0.2937567800097258 Coefficient of Determination: -0.686091002506964 RMSE: 0.587039766056007 NRMSE: 0.23954940261813723 MAPE: 149.4005382757414 Predictor: ElasticNet Pearson Correlation: 0.7677936816453251 Spearman Correlation: 0.6846008049276339 Coefficient of Determination: 0.5701575742968796 RMSE: 0.33096168918110785 NRMSE: 0.0798710546567338 MAPE: 57.74237729607894 Pearson Correlation: 0.6622150477498251 Spearman Correlation: 0.5399992518609958 Coefficient of Determination: 0.42608685748592556 RMSE: 0.3424917392552888 NRMSE: 0.13975832010743852 MAPE: 66.284336744317 Predictor: RandomForests Pearson Correlation: 0.6343060182743792 Spearman Correlation: 0.586554184995694 Coefficient of Determination: 0.3382577248713977 RMSE: 0.4106459324579687 NRMSE: 0.09910126999009791 MAPE: 75.5247707954288 Pearson Correlation: 0.609977360898037 Spearman Correlation: 0.5223132458010699 Coefficient of Determination: 0.3112483989918624 RMSE: 0.3751961096469366 NRMSE: 0.15310377444174353 MAPE: 96.91880764042892 Protein: CCND1 x_train_column_count: 859 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'SLC28A3', 'PPP1R3G', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'HEPACAM2', 'METTL7B', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'ALOXE3', 'LRIT3', 'SGK2', 'GLIS1', 'ZNF843', 'S100A3', 'WNT2B', 'NR1I3', 'LINC00482', 'CCDC36', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'FCRL6', 'BCHE', 'CKMT2', 'DQX1', 'ABCA17P', 'FAM189A1', 'LPAR3', 'PITX2', 'NLRP12', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'C1ORF101', 'SLC6A20', 'FAM90A1', 'FAM95B1', 'ZNF835', 'CA3', 'CLDN9', 'OTOA', 'SPIB', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'PCSK1N', 'CLECL1', 'ULBP3', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'LINC01550', 'SCN2B', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'GSTM1', 'PCYT1B', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'CPEB1', 'JPH3', 'CAMP', 'LOC441455', 'LOC90768', 'OR7E91P', 'FLJ37201', 'RELN', 'IL12RB2', 'SCARA5', 'LBX2', 'FUT7', 'PLA2G5', 'RIMS1', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'MNX1', 'HOXB13', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'WDR72', 'BTBD8', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'LINC01124', 'HOXB8', 'RSPH4A', 'MGC16142', 'CCDC183', 'ALB', 'SCART1', 'CELF5', 'GBP1P1', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'CCDC153', 'SKIDA1', 'NIPAL1', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'NOXO1', 'PPP4R4', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'CXCR2P1', 'ULBP2', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'ORM1', 'DBIL5P', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'BRINP1', 'CTCFL', 'VWDE', 'BDKRB1', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'CECR2', 'RDM1', 'HCG27', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'CLEC12A', 'PKD1L1', 'CBLN2', 'ECEL1', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'FAM184B', 'SORCS1', 'SPESP1', 'PCDHGA3', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'CHRNB2', 'COL2A1', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'TRAT1', 'GPR87', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'SLC13A2', 'CA9', 'WIPF3', 'EMX1', 'ZSCAN1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CITED1', 'MAPT.IT1', 'GZMM', 'WFDC3', 'FIRRE', 'ROPN1L', 'ANKK1', 'M1AP', 'PVALB', 'CDHR1', 'MYO3B', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'IGSF22', 'HEATR4', 'KCNT2', 'MROH7', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'MIA', 'CIDEC', 'SRSF12', 'CCBE1', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KLK6', 'KCNA6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'DHDH', 'SMC1B', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'ADGRG2', 'C9ORF47', 'TUSC5', 'TMPRSS4', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'FAM157A', 'VENTX', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'FAM19A2', 'CCNI2', 'DLX5', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'GHRLOS', 'CD160', 'PTPRR', 'ABCC2', 'OR2W3', 'RYR3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'CDKL2', 'MYO16', 'CACNA1I', 'PWAR5', 'DCX', 'DLK2', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'FKBP1AP1', 'UNC13A', 'SLC39A2', 'XCL2', 'AGBL4', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'P2RY12', 'HRCT1', 'PCBP3', 'LINC00202.1', 'TM6SF2', 'ZNF727', 'ARL9', 'KCNH3', 'SNORD116.4', 'MAK', 'MPL', 'GRID2IP', 'SLC46A2', 'TCTEX1D1', 'NOX5', 'SYCE3', 'CD70', 'GPM6A', 'ELOVL3', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'PGLYRP2', 'GRIN2A', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'AGAP7P', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'KLK10', 'SCN9A', 'SCN2A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'GABRB3', 'TTYH1', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'SLC35F3', 'IL17D', 'GPR63', 'CAPSL', 'GBP6', 'MUC15', 'ANKLE1', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'FAM201A', 'HAMP', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.7585238980184671e-15 NRMSE: 1.1234995067903982e-15 MAPE: 5.887655301610023e-12 Pearson Correlation: 0.1032071999174573 Spearman Correlation: 0.059464581852641564 Coefficient of Determination: -1.6499083823314247 RMSE: 0.3727815609196511 NRMSE: 0.2351044153125953 MAPE: 846.6543957862181 Predictor: ElasticNet Pearson Correlation: 0.6084692548854029 Spearman Correlation: 0.6080170493340965 Coefficient of Determination: 0.2890121030092012 RMSE: 0.20262722956217225 NRMSE: 0.12945606979349372 MAPE: 459.17225441968156 Pearson Correlation: 0.21382600003538085 Spearman Correlation: 0.20980062095537352 Coefficient of Determination: 0.03226759567825388 RMSE: 0.22527688627995704 NRMSE: 0.14207674462661268 MAPE: 492.356848576368 Predictor: RandomForests Pearson Correlation: 0.5144240152170287 Spearman Correlation: 0.5399622762175682 Coefficient of Determination: 0.15124939494399714 RMSE: 0.22138936318483868 NRMSE: 0.1414429685186994 MAPE: 546.8192849833245 Pearson Correlation: 0.17830203226575664 Spearman Correlation: 0.13899674559533162 Coefficient of Determination: 0.02761205861683813 RMSE: 0.22581811366264556 NRMSE: 0.14241808379329313 MAPE: 514.9990524691111 Protein: ERBB2 x_train_column_count: 665 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'SLC28A3', 'PPP1R3G', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'HEPACAM2', 'METTL7B', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'ALOXE3', 'LRIT3', 'SGK2', 'GLIS1', 'ZNF843', 'S100A3', 'WNT2B', 'NR1I3', 'LINC00482', 'CCDC36', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'FCRL6', 'BCHE', 'CKMT2', 'DQX1', 'ABCA17P', 'FAM189A1', 'LPAR3', 'PITX2', 'NLRP12', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'C1ORF101', 'SLC6A20', 'FAM90A1', 'FAM95B1', 'ZNF835', 'CA3', 'CLDN9', 'OTOA', 'SPIB', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'PCSK1N', 'CLECL1', 'ULBP3', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'LINC01550', 'SCN2B', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'GSTM1', 'PCYT1B', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'CPEB1', 'JPH3', 'CAMP', 'LOC441455', 'LOC90768', 'OR7E91P', 'FLJ37201', 'RELN', 'IL12RB2', 'SCARA5', 'LBX2', 'FUT7', 'PLA2G5', 'RIMS1', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'MNX1', 'HOXB13', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'WDR72', 'BTBD8', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'LINC01124', 'HOXB8', 'RSPH4A', 'MGC16142', 'CCDC183', 'ALB', 'SCART1', 'CELF5', 'GBP1P1', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'CCDC153', 'SKIDA1', 'NIPAL1', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'NOXO1', 'PPP4R4', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'CXCR2P1', 'ULBP2', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'ORM1', 'DBIL5P', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'BRINP1', 'CTCFL', 'VWDE', 'BDKRB1', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'CECR2', 'RDM1', 'HCG27', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'CLEC12A', 'PKD1L1', 'CBLN2', 'ECEL1', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'FAM184B', 'SORCS1', 'SPESP1', 'PCDHGA3', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'CHRNB2', 'COL2A1', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'TRAT1', 'GPR87', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'SLC13A2', 'CA9', 'WIPF3', 'EMX1', 'ZSCAN1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CITED1', 'MAPT.IT1', 'GZMM', 'WFDC3', 'FIRRE', 'ROPN1L', 'ANKK1', 'M1AP', 'PVALB', 'CDHR1', 'MYO3B', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'IGSF22', 'HEATR4', 'KCNT2', 'MROH7', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'MIA', 'CIDEC', 'SRSF12', 'CCBE1', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KLK6', 'KCNA6', 'GALNT13', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 6.015059487809747e-15 NRMSE: 1.0247643811114276e-15 MAPE: 6.7899486267894285e-12 Pearson Correlation: 0.3386023994238666 Spearman Correlation: 0.3062785150422149 Coefficient of Determination: -1.1718769777537594 RMSE: 1.527764743125487 NRMSE: 0.2751043942675635 MAPE: 723.2206003065022 Predictor: ElasticNet Pearson Correlation: 0.9063479150301309 Spearman Correlation: 0.8197735108803527 Coefficient of Determination: 0.7905574302895532 RMSE: 0.4488735272012618 NRMSE: 0.07647299303222682 MAPE: 573.4146743848391 Pearson Correlation: 0.603057922189408 Spearman Correlation: 0.47482197386784114 Coefficient of Determination: 0.35916353365254894 RMSE: 0.8298746166459774 NRMSE: 0.14943541193610715 MAPE: 397.1643303823271 Predictor: RandomForests Pearson Correlation: 0.6016968615786664 Spearman Correlation: 0.5505708156484237 Coefficient of Determination: 0.2776896331702783 RMSE: 0.8335918086134754 NRMSE: 0.14201608406110625 MAPE: 817.4545980076883 Pearson Correlation: 0.5003043172482944 Spearman Correlation: 0.45873696522057783 Coefficient of Determination: 0.16373575767717863 RMSE: 0.9480050180104113 NRMSE: 0.1707071376112672 MAPE: 241.28155162684982 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.7720617707442768 Spearman Correlation: 0.7569936971423784 Coefficient of Determination: 0.5960793778447881 RMSE: 0.3036111088134875 NRMSE: 0.08301759241753574 MAPE: 175.64386482958648 Pearson Correlation: 0.17098816567871328 Spearman Correlation: 0.15885734236087734 Coefficient of Determination: -1.087358986290179 RMSE: 0.5556306468456412 NRMSE: 0.27348469330434627 MAPE: 460.65443743701803 Predictor: ElasticNet Pearson Correlation: 0.6369745313757229 Spearman Correlation: 0.6362620153635856 Coefficient of Determination: 0.37491799694097394 RMSE: 0.3776923097358471 NRMSE: 0.10327390967815375 MAPE: 195.66605292575818 Pearson Correlation: 0.3671266325533294 Spearman Correlation: 0.3622464120500256 Coefficient of Determination: 0.07785435623292236 RMSE: 0.36930686313047734 NRMSE: 0.18177502405926027 MAPE: 221.10386678150448 Predictor: RandomForests Pearson Correlation: 0.5194956902567824 Spearman Correlation: 0.5320858994644133 Coefficient of Determination: 0.20223144817630634 RMSE: 0.42668571243204745 NRMSE: 0.11667037053914274 MAPE: 215.86157340272973 Pearson Correlation: 0.36664211020944026 Spearman Correlation: 0.3789997381513486 Coefficient of Determination: 0.12691028740579546 RMSE: 0.3593495080266814 NRMSE: 0.17687395493691466 MAPE: 198.29065734586186 Fold: 5 Protein: RB1 x_train_column_count: 373 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'PPP1R3G', 'SLC28A3', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'METTL7B', 'HEPACAM2', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'LRIT3', 'ALOXE3', 'GLIS1', 'SGK2', 'ZNF843', 'S100A3', 'LINC00482', 'NR1I3', 'CCDC36', 'WNT2B', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'BCHE', 'FCRL6', 'CKMT2', 'ABCA17P', 'LPAR3', 'DQX1', 'FAM189A1', 'PITX2', 'NLRP12', 'ADCYAP1', 'ENPP6', 'C2ORF50', 'CACNA1G', 'C1ORF101', 'SLC6A20', 'FAM95B1', 'FAM90A1', 'ZNF835', 'OTOA', 'SPIB', 'CLDN9', 'CA3', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'CLECL1', 'ULBP3', 'PCSK1N', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'SCN2B', 'LINC01550', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'PCYT1B', 'GSTM1', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'JPH3', 'CAMP', 'CPEB1', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.8825891914750682 Spearman Correlation: 0.8188802240817181 Coefficient of Determination: 0.7789636809086147 RMSE: 0.10996929570606917 NRMSE: 0.054326482517337044 MAPE: 272.03134704990356 Pearson Correlation: 0.03629745273085877 Spearman Correlation: 0.11282185563411017 Coefficient of Determination: -1.620996079892337 RMSE: 0.38914600069935396 NRMSE: 0.19620938663420626 MAPE: 3070.0764198226916 Predictor: ElasticNet Pearson Correlation: 0.5440100017362374 Spearman Correlation: 0.502765130210933 Coefficient of Determination: 0.2306073154352266 RMSE: 0.20516990159171067 NRMSE: 0.10135701061228747 MAPE: 193.65990302392854 Pearson Correlation: -0.002664562431646529 Spearman Correlation: 0.0560131672464744 Coefficient of Determination: -0.14614678709227613 RMSE: 0.25733538400921285 NRMSE: 0.12974980538148803 MAPE: 456.8190131773027 Predictor: RandomForests Pearson Correlation: 0.4428257501800629 Spearman Correlation: 0.4226617571986456 Coefficient of Determination: 0.1490603784625234 RMSE: 0.21576897411433732 NRMSE: 0.10659311151121034 MAPE: 230.83061256371508 Pearson Correlation: -0.007581477434154964 Spearman Correlation: 0.036152570480928695 Coefficient of Determination: -0.13842864322650117 RMSE: 0.2564674731420938 NRMSE: 0.12931220032173013 MAPE: 440.2193351710207 Protein: CDH1 x_train_column_count: 836 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'PPP1R3G', 'SLC28A3', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'METTL7B', 'HEPACAM2', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'LRIT3', 'ALOXE3', 'GLIS1', 'SGK2', 'ZNF843', 'S100A3', 'LINC00482', 'NR1I3', 'CCDC36', 'WNT2B', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'BCHE', 'FCRL6', 'CKMT2', 'ABCA17P', 'LPAR3', 'DQX1', 'FAM189A1', 'PITX2', 'NLRP12', 'ADCYAP1', 'ENPP6', 'C2ORF50', 'CACNA1G', 'C1ORF101', 'SLC6A20', 'FAM95B1', 'FAM90A1', 'ZNF835', 'OTOA', 'SPIB', 'CLDN9', 'CA3', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'CLECL1', 'ULBP3', 'PCSK1N', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'SCN2B', 'LINC01550', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'PCYT1B', 'GSTM1', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'JPH3', 'CAMP', 'CPEB1', 'LOC90768', 'LOC441455', 'OR7E91P', 'FLJ37201', 'RELN', 'SCARA5', 'IL12RB2', 'LBX2', 'FUT7', 'RIMS1', 'PLA2G5', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'HOXB13', 'MNX1', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'BTBD8', 'WDR72', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'HOXB8', 'LINC01124', 'RSPH4A', 'MGC16142', 'ALB', 'CCDC183', 'SCART1', 'GBP1P1', 'CELF5', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'SKIDA1', 'CCDC153', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'NIPAL1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'PPP4R4', 'NOXO1', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'ULBP2', 'CXCR2P1', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'DBIL5P', 'ORM1', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'SUCNR1', 'DEPDC4', 'BRINP1', 'CTCFL', 'BDKRB1', 'VWDE', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'RDM1', 'CECR2', 'HCG27', 'KIAA0319', 'CYP4F8', 'CDR1', 'NUGGC', 'CLEC12A', 'ECEL1', 'PKD1L1', 'CBLN2', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'SPESP1', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'GPR87', 'TRAT1', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'WIPF3', 'SLC13A2', 'ZSCAN1', 'CA9', 'EMX1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'CITED1', 'TMEM40', 'MAPT.IT1', 'GZMM', 'ANKK1', 'WFDC3', 'ROPN1L', 'FIRRE', 'M1AP', 'CDHR1', 'MYO3B', 'PVALB', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'TTC23L', 'RBM12B.AS1', 'IGSF22', 'RFX8', 'MROH7', 'KCNT2', 'HEATR4', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'CIDEC', 'MIA', 'CCBE1', 'SRSF12', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KCNA6', 'KLK6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'SMC1B', 'DHDH', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'TUSC5', 'ADGRG2', 'TMPRSS4', 'C9ORF47', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'VENTX', 'FAM157A', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'DLX5', 'FAM19A2', 'CCNI2', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'CD160', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'OR2W3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'MYO16', 'CDKL2', 'CACNA1I', 'PWAR5', 'DLK2', 'DCX', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'SLC39A2', 'XCL2', 'LY6H', 'AGBL4', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'HRCT1', 'P2RY12', 'PCBP3', 'TM6SF2', 'LINC00202.1', 'ZNF727', 'ARL9', 'KCNH3', 'MAK', 'MPL', 'SNORD116.4', 'GRID2IP', 'SYCE3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'CD70', 'ELOVL3', 'GPM6A', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'GRIN2A', 'PGLYRP2', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'LRRC43', 'AGAP7P', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'SCN2A', 'KLK10', 'SCN9A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'TTYH1', 'GABRB3', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'IL17D', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 6.143366539028535e-15 NRMSE: 9.782119262170846e-16 MAPE: 2.767694525489843e-12 Pearson Correlation: 0.31004469417871844 Spearman Correlation: 0.31406626017780775 Coefficient of Determination: -0.6793431746369456 RMSE: 1.5055028390779102 NRMSE: 0.2960615993938979 MAPE: 2897.1597007369246 Predictor: ElasticNet Pearson Correlation: 0.9237187363997971 Spearman Correlation: 0.8761421099957312 Coefficient of Determination: 0.8171470502247588 RMSE: 0.48152345931036206 NRMSE: 0.07667326825743798 MAPE: 173.37823719824803 Pearson Correlation: 0.41696277184309094 Spearman Correlation: 0.4473447299841644 Coefficient of Determination: 0.10409982912423643 RMSE: 1.099617547957401 NRMSE: 0.2162430528322749 MAPE: 1795.5075381178688 Predictor: RandomForests Pearson Correlation: 0.6787818164889391 Spearman Correlation: 0.6015530905393194 Coefficient of Determination: 0.45554562392663767 RMSE: 0.8308970391196577 NRMSE: 0.1323042322091108 MAPE: 162.57428697206657 Pearson Correlation: 0.4688634431048551 Spearman Correlation: 0.5171342749094096 Coefficient of Determination: 0.1949223286466547 RMSE: 1.0423912158742108 NRMSE: 0.20498932486562915 MAPE: 453.72191925430565 Protein: CDH2 x_train_column_count: 475 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'PPP1R3G', 'SLC28A3', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'METTL7B', 'HEPACAM2', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'LRIT3', 'ALOXE3', 'GLIS1', 'SGK2', 'ZNF843', 'S100A3', 'LINC00482', 'NR1I3', 'CCDC36', 'WNT2B', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'BCHE', 'FCRL6', 'CKMT2', 'ABCA17P', 'LPAR3', 'DQX1', 'FAM189A1', 'PITX2', 'NLRP12', 'ADCYAP1', 'ENPP6', 'C2ORF50', 'CACNA1G', 'C1ORF101', 'SLC6A20', 'FAM95B1', 'FAM90A1', 'ZNF835', 'OTOA', 'SPIB', 'CLDN9', 'CA3', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'CLECL1', 'ULBP3', 'PCSK1N', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'SCN2B', 'LINC01550', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'PCYT1B', 'GSTM1', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'JPH3', 'CAMP', 'CPEB1', 'LOC90768', 'LOC441455', 'OR7E91P', 'FLJ37201', 'RELN', 'SCARA5', 'IL12RB2', 'LBX2', 'FUT7', 'RIMS1', 'PLA2G5', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'HOXB13', 'MNX1', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'BTBD8', 'WDR72', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'HOXB8', 'LINC01124', 'RSPH4A', 'MGC16142', 'ALB', 'CCDC183', 'SCART1', 'GBP1P1', 'CELF5', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'SKIDA1', 'CCDC153', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'NIPAL1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'PPP4R4', 'NOXO1', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.9534487224197199 Spearman Correlation: 0.9426482584855594 Coefficient of Determination: 0.909064466283796 RMSE: 0.10829944800653994 NRMSE: 0.053189650806217736 MAPE: 220.12451643401292 Pearson Correlation: 0.13245998113942828 Spearman Correlation: 0.14380995250569478 Coefficient of Determination: -3.885059383403341 RMSE: 0.921862905772942 NRMSE: 0.344731187769176 MAPE: 8927.82972076823 Predictor: ElasticNet Pearson Correlation: 0.6371540007763142 Spearman Correlation: 0.6596443593414475 Coefficient of Determination: 0.3355784098178356 RMSE: 0.29273948277190676 NRMSE: 0.14377460968120756 MAPE: 1157.6665316670776 Pearson Correlation: 0.1251871623723868 Spearman Correlation: 0.14736361720683436 Coefficient of Determination: -0.028672160759385168 RMSE: 0.4230287749225227 NRMSE: 0.15819186467569984 MAPE: 717.5296639104478 Predictor: RandomForests Pearson Correlation: 0.4393815088491485 Spearman Correlation: 0.46425557233606685 Coefficient of Determination: 0.1331656317054084 RMSE: 0.33437014535091675 NRMSE: 0.16422088568877594 MAPE: 864.2947807582939 Pearson Correlation: 0.15814420712658825 Spearman Correlation: 0.1802568364405402 Coefficient of Determination: 0.008428578642893036 RMSE: 0.4153301098469047 NRMSE: 0.1553129442428079 MAPE: 1621.486201029658 Protein: CDH3 x_train_column_count: 76 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.5713758693540824 Spearman Correlation: 0.5820011903262652 Coefficient of Determination: 0.3264703840801333 RMSE: 0.1672298814970776 NRMSE: 0.11732466289013134 MAPE: 413.69498232482476 Pearson Correlation: 0.2873882527416964 Spearman Correlation: 0.27141236175014655 Coefficient of Determination: 0.009736604739256527 RMSE: 0.22230194208213722 NRMSE: 0.20056292648087515 MAPE: 239.09203648193676 Predictor: ElasticNet Pearson Correlation: 0.49693468084948467 Spearman Correlation: 0.5192442027076427 Coefficient of Determination: 0.2112246372635218 RMSE: 0.18097234005723853 NRMSE: 0.12696605773786168 MAPE: 388.9888196176824 Pearson Correlation: 0.4127458709116747 Spearman Correlation: 0.40681554632850786 Coefficient of Determination: 0.14462899769396653 RMSE: 0.20660705894033915 NRMSE: 0.186402853634857 MAPE: 206.58259317515822 Predictor: RandomForests Pearson Correlation: 0.463308779954201 Spearman Correlation: 0.4873753669463116 Coefficient of Determination: 0.178436639765866 RMSE: 0.1846953939244533 NRMSE: 0.12957806724227797 MAPE: 354.9034926778918 Pearson Correlation: 0.37979027839264323 Spearman Correlation: 0.3923016496465043 Coefficient of Determination: 0.1179578059053632 RMSE: 0.20980342532498777 NRMSE: 0.18928664578802387 MAPE: 184.43434161739532 Protein: PTEN x_train_column_count: 886 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'PPP1R3G', 'SLC28A3', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'METTL7B', 'HEPACAM2', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'LRIT3', 'ALOXE3', 'GLIS1', 'SGK2', 'ZNF843', 'S100A3', 'LINC00482', 'NR1I3', 'CCDC36', 'WNT2B', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'BCHE', 'FCRL6', 'CKMT2', 'ABCA17P', 'LPAR3', 'DQX1', 'FAM189A1', 'PITX2', 'NLRP12', 'ADCYAP1', 'ENPP6', 'C2ORF50', 'CACNA1G', 'C1ORF101', 'SLC6A20', 'FAM95B1', 'FAM90A1', 'ZNF835', 'OTOA', 'SPIB', 'CLDN9', 'CA3', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'CLECL1', 'ULBP3', 'PCSK1N', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'SCN2B', 'LINC01550', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'PCYT1B', 'GSTM1', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'JPH3', 'CAMP', 'CPEB1', 'LOC90768', 'LOC441455', 'OR7E91P', 'FLJ37201', 'RELN', 'SCARA5', 'IL12RB2', 'LBX2', 'FUT7', 'RIMS1', 'PLA2G5', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'HOXB13', 'MNX1', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'BTBD8', 'WDR72', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'HOXB8', 'LINC01124', 'RSPH4A', 'MGC16142', 'ALB', 'CCDC183', 'SCART1', 'GBP1P1', 'CELF5', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'SKIDA1', 'CCDC153', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'NIPAL1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'PPP4R4', 'NOXO1', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'ULBP2', 'CXCR2P1', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'DBIL5P', 'ORM1', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'SUCNR1', 'DEPDC4', 'BRINP1', 'CTCFL', 'BDKRB1', 'VWDE', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'RDM1', 'CECR2', 'HCG27', 'KIAA0319', 'CYP4F8', 'CDR1', 'NUGGC', 'CLEC12A', 'ECEL1', 'PKD1L1', 'CBLN2', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'SPESP1', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'GPR87', 'TRAT1', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'WIPF3', 'SLC13A2', 'ZSCAN1', 'CA9', 'EMX1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'CITED1', 'TMEM40', 'MAPT.IT1', 'GZMM', 'ANKK1', 'WFDC3', 'ROPN1L', 'FIRRE', 'M1AP', 'CDHR1', 'MYO3B', 'PVALB', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'TTC23L', 'RBM12B.AS1', 'IGSF22', 'RFX8', 'MROH7', 'KCNT2', 'HEATR4', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'CIDEC', 'MIA', 'CCBE1', 'SRSF12', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KCNA6', 'KLK6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'SMC1B', 'DHDH', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'TUSC5', 'ADGRG2', 'TMPRSS4', 'C9ORF47', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'VENTX', 'FAM157A', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'DLX5', 'FAM19A2', 'CCNI2', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'CD160', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'OR2W3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'MYO16', 'CDKL2', 'CACNA1I', 'PWAR5', 'DLK2', 'DCX', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'SLC39A2', 'XCL2', 'LY6H', 'AGBL4', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'HRCT1', 'P2RY12', 'PCBP3', 'TM6SF2', 'LINC00202.1', 'ZNF727', 'ARL9', 'KCNH3', 'MAK', 'MPL', 'SNORD116.4', 'GRID2IP', 'SYCE3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'CD70', 'ELOVL3', 'GPM6A', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'GRIN2A', 'PGLYRP2', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'LRRC43', 'AGAP7P', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'SCN2A', 'KLK10', 'SCN9A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'TTYH1', 'GABRB3', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'IL17D', 'SLC35F3', 'GPR63', 'CAPSL', 'GBP6', 'ANKLE1', 'MUC15', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'HAMP', 'FAM201A', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'MTUS2', 'LOC100132215', 'RUNDC3A', 'RRN3P1', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'CYP2E1', 'FOLR1', 'LINC00961', 'PNMA6A', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'KIF19', 'CCR10', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.6637250944474265e-15 NRMSE: 7.292197786642836e-16 MAPE: 5.877127568989545e-12 Pearson Correlation: 0.17233977440519319 Spearman Correlation: 0.17370042020474072 Coefficient of Determination: -0.8229241253028519 RMSE: 0.9744144864635452 NRMSE: 0.18848933891665606 MAPE: 1527.6099408757912 Predictor: ElasticNet Pearson Correlation: 0.831228481643141 Spearman Correlation: 0.7962849476035672 Coefficient of Determination: 0.5906925920697246 RMSE: 0.3640475524634513 NRMSE: 0.05692245367265284 MAPE: 192.0389804642947 Pearson Correlation: 0.29911627105916533 Spearman Correlation: 0.3193431339542887 Coefficient of Determination: 0.05789156927383976 RMSE: 0.7005028083495649 NRMSE: 0.1355042572635339 MAPE: 914.914991597598 Predictor: RandomForests Pearson Correlation: 0.5394466177186239 Spearman Correlation: 0.5280475316730312 Coefficient of Determination: 0.14911618993900932 RMSE: 0.5248901746041401 NRMSE: 0.08207179651382067 MAPE: 336.82654100670857 Pearson Correlation: 0.2859726261091967 Spearman Correlation: 0.3611291911370466 Coefficient of Determination: 0.0476249024711376 RMSE: 0.7043093455888098 NRMSE: 0.13624058836057137 MAPE: 490.9856172618145 Protein: BRCA2 x_train_column_count: 365 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'PPP1R3G', 'SLC28A3', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'METTL7B', 'HEPACAM2', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'LRIT3', 'ALOXE3', 'GLIS1', 'SGK2', 'ZNF843', 'S100A3', 'LINC00482', 'NR1I3', 'CCDC36', 'WNT2B', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'BCHE', 'FCRL6', 'CKMT2', 'ABCA17P', 'LPAR3', 'DQX1', 'FAM189A1', 'PITX2', 'NLRP12', 'ADCYAP1', 'ENPP6', 'C2ORF50', 'CACNA1G', 'C1ORF101', 'SLC6A20', 'FAM95B1', 'FAM90A1', 'ZNF835', 'OTOA', 'SPIB', 'CLDN9', 'CA3', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'CLECL1', 'ULBP3', 'PCSK1N', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'SCN2B', 'LINC01550', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'PCYT1B', 'GSTM1', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.8452560005343308 Spearman Correlation: 0.8176642539050644 Coefficient of Determination: 0.7144577064392925 RMSE: 0.10712250367508157 NRMSE: 0.06901111526821167 MAPE: 347.43970780540354 Pearson Correlation: 0.051544685003435245 Spearman Correlation: -0.003239441888302847 Coefficient of Determination: -2.970098339442868 RMSE: 0.3309312069881682 NRMSE: 0.43278782055602977 MAPE: 649.301702091641 Predictor: ElasticNet Pearson Correlation: 0.47975448064749887 Spearman Correlation: 0.46956732350838853 Coefficient of Determination: 0.1770665205167794 RMSE: 0.1818560937537621 NRMSE: 0.11715644629007062 MAPE: 171.28957814154575 Pearson Correlation: 0.11929003867042386 Spearman Correlation: 0.10479681791543537 Coefficient of Determination: -0.0790153059377201 RMSE: 0.1725245461939707 NRMSE: 0.2256255099639975 MAPE: 206.9968634139102 Predictor: RandomForests Pearson Correlation: 0.4405365082587232 Spearman Correlation: 0.4312646527123695 Coefficient of Determination: 0.13450085901182984 RMSE: 0.18649999018203517 NRMSE: 0.12014816568338553 MAPE: 149.41333991017547 Pearson Correlation: 0.09302018711737858 Spearman Correlation: 0.0680781555879749 Coefficient of Determination: -0.07484531470222411 RMSE: 0.1721908520072444 NRMSE: 0.2251891087520361 MAPE: 186.32245569709914 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'PPP1R3G', 'SLC28A3', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'METTL7B', 'HEPACAM2', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'LRIT3', 'ALOXE3', 'GLIS1', 'SGK2', 'ZNF843', 'S100A3', 'LINC00482', 'NR1I3', 'CCDC36', 'WNT2B', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'BCHE', 'FCRL6', 'CKMT2', 'ABCA17P', 'LPAR3', 'DQX1', 'FAM189A1', 'PITX2', 'NLRP12', 'ADCYAP1', 'ENPP6', 'C2ORF50', 'CACNA1G', 'C1ORF101', 'SLC6A20', 'FAM95B1', 'FAM90A1', 'ZNF835', 'OTOA', 'SPIB', 'CLDN9', 'CA3', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'CLECL1', 'ULBP3', 'PCSK1N', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'SCN2B', 'LINC01550', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'PCYT1B', 'GSTM1', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'JPH3', 'CAMP', 'CPEB1', 'LOC90768', 'LOC441455', 'OR7E91P', 'FLJ37201', 'RELN', 'SCARA5', 'IL12RB2', 'LBX2', 'FUT7', 'RIMS1', 'PLA2G5', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'HOXB13', 'MNX1', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'BTBD8', 'WDR72', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'HOXB8', 'LINC01124', 'RSPH4A', 'MGC16142', 'ALB', 'CCDC183', 'SCART1', 'GBP1P1', 'CELF5', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'SKIDA1', 'CCDC153', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'NIPAL1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'PPP4R4', 'NOXO1', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'ULBP2', 'CXCR2P1', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'DBIL5P', 'ORM1', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'SUCNR1', 'DEPDC4', 'BRINP1', 'CTCFL', 'BDKRB1', 'VWDE', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'RDM1', 'CECR2', 'HCG27', 'KIAA0319', 'CYP4F8', 'CDR1', 'NUGGC', 'CLEC12A', 'ECEL1', 'PKD1L1', 'CBLN2', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'SPESP1', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'GPR87', 'TRAT1', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'WIPF3', 'SLC13A2', 'ZSCAN1', 'CA9', 'EMX1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'CITED1', 'TMEM40', 'MAPT.IT1', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 5.787970083482697e-15 NRMSE: 1.4738535009250331e-15 MAPE: 4.356087304588177e-12 Pearson Correlation: 0.2064694440542647 Spearman Correlation: 0.19284779111959005 Coefficient of Determination: -3.9612378708058333 RMSE: 1.349681954942334 NRMSE: 0.33961952516100097 MAPE: 1385.1433812528912 Predictor: ElasticNet Pearson Correlation: 0.8374014750653396 Spearman Correlation: 0.8122779264010569 Coefficient of Determination: 0.6546401994964862 RMSE: 0.3994341139291961 NRMSE: 0.10171223394596422 MAPE: 341.0824543901491 Pearson Correlation: 0.2689847820291849 Spearman Correlation: 0.23139690021072581 Coefficient of Determination: -0.1018892926581707 RMSE: 0.6360707105264141 NRMSE: 0.16005402745940314 MAPE: 415.27479919631816 Predictor: RandomForests Pearson Correlation: 0.5928758812670902 Spearman Correlation: 0.5501008365420021 Coefficient of Determination: 0.2433694239198252 RMSE: 0.5912228419101435 NRMSE: 0.15054947465308843 MAPE: 225.71440950031604 Pearson Correlation: 0.33591829628354125 Spearman Correlation: 0.2960311225825759 Coefficient of Determination: 0.10686454785080901 RMSE: 0.572657668409482 NRMSE: 0.14409744807867994 MAPE: 292.1691251511485 Protein: TP53 x_train_column_count: 1002 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'PPP1R3G', 'SLC28A3', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'METTL7B', 'HEPACAM2', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'LRIT3', 'ALOXE3', 'GLIS1', 'SGK2', 'ZNF843', 'S100A3', 'LINC00482', 'NR1I3', 'CCDC36', 'WNT2B', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'BCHE', 'FCRL6', 'CKMT2', 'ABCA17P', 'LPAR3', 'DQX1', 'FAM189A1', 'PITX2', 'NLRP12', 'ADCYAP1', 'ENPP6', 'C2ORF50', 'CACNA1G', 'C1ORF101', 'SLC6A20', 'FAM95B1', 'FAM90A1', 'ZNF835', 'OTOA', 'SPIB', 'CLDN9', 'CA3', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'CLECL1', 'ULBP3', 'PCSK1N', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'SCN2B', 'LINC01550', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'PCYT1B', 'GSTM1', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'JPH3', 'CAMP', 'CPEB1', 'LOC90768', 'LOC441455', 'OR7E91P', 'FLJ37201', 'RELN', 'SCARA5', 'IL12RB2', 'LBX2', 'FUT7', 'RIMS1', 'PLA2G5', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'HOXB13', 'MNX1', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'BTBD8', 'WDR72', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'HOXB8', 'LINC01124', 'RSPH4A', 'MGC16142', 'ALB', 'CCDC183', 'SCART1', 'GBP1P1', 'CELF5', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'SKIDA1', 'CCDC153', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'NIPAL1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'PPP4R4', 'NOXO1', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'ULBP2', 'CXCR2P1', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'DBIL5P', 'ORM1', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'SUCNR1', 'DEPDC4', 'BRINP1', 'CTCFL', 'BDKRB1', 'VWDE', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'RDM1', 'CECR2', 'HCG27', 'KIAA0319', 'CYP4F8', 'CDR1', 'NUGGC', 'CLEC12A', 'ECEL1', 'PKD1L1', 'CBLN2', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'SPESP1', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'GPR87', 'TRAT1', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'WIPF3', 'SLC13A2', 'ZSCAN1', 'CA9', 'EMX1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'CITED1', 'TMEM40', 'MAPT.IT1', 'GZMM', 'ANKK1', 'WFDC3', 'ROPN1L', 'FIRRE', 'M1AP', 'CDHR1', 'MYO3B', 'PVALB', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'TTC23L', 'RBM12B.AS1', 'IGSF22', 'RFX8', 'MROH7', 'KCNT2', 'HEATR4', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'CIDEC', 'MIA', 'CCBE1', 'SRSF12', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KCNA6', 'KLK6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'SMC1B', 'DHDH', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'TUSC5', 'ADGRG2', 'TMPRSS4', 'C9ORF47', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'VENTX', 'FAM157A', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'DLX5', 'FAM19A2', 'CCNI2', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'CD160', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'OR2W3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'MYO16', 'CDKL2', 'CACNA1I', 'PWAR5', 'DLK2', 'DCX', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'SLC39A2', 'XCL2', 'LY6H', 'AGBL4', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'HRCT1', 'P2RY12', 'PCBP3', 'TM6SF2', 'LINC00202.1', 'ZNF727', 'ARL9', 'KCNH3', 'MAK', 'MPL', 'SNORD116.4', 'GRID2IP', 'SYCE3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'CD70', 'ELOVL3', 'GPM6A', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'GRIN2A', 'PGLYRP2', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'LRRC43', 'AGAP7P', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'SCN2A', 'KLK10', 'SCN9A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'TTYH1', 'GABRB3', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'IL17D', 'SLC35F3', 'GPR63', 'CAPSL', 'GBP6', 'ANKLE1', 'MUC15', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'HAMP', 'FAM201A', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'MTUS2', 'LOC100132215', 'RUNDC3A', 'RRN3P1', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'CYP2E1', 'FOLR1', 'LINC00961', 'PNMA6A', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'KIF19', 'CCR10', 'DPEP1', 'IL1RL1', 'GLI1', 'ARRDC3.AS1', 'IL24', 'KISS1R', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'KIAA1210', 'NIPAL4', 'PRRT4', 'RHBG', 'A2ML1', 'WBP2NL', 'GPR135', 'CBLN1', 'LOC90246', 'GNMT', 'DPF3', 'PCDHB18P', 'IL18RAP', 'MAP7D2', 'CD300LB', 'B3GALT5', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'MASP2', 'GABRB2', 'PCDH20', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'ANK1', 'GPR171', 'CRB2', 'KCNB1', 'CD19', 'SLC26A3', 'SEPHS1P1', 'LINC01465', 'HIST1H2AG', 'UCA1', 'RASAL1', 'TYMSOS', 'LINC00685', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'RIC3', 'CST2', 'MED12L', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'NRXN1', 'SEC14L1P1', 'FAM182B', 'EYA1', 'IL6', 'MYEOV', 'ARHGEF33', 'MAPT.AS1', 'RAB3B', 'STXBP6', 'KCNRG', 'CR2', 'CXCR2', 'MSLN', 'PATL2', 'KIF4B', 'LPAR4', 'CLEC4F', 'AJAP1', 'ZNF676', 'TDRD9', 'VSTM2A', 'CLDN14', 'FNDC8', 'MKX', 'ABHD1', 'TRABD2A', 'MAGEL2', 'NDP', 'PDCD1', 'FAM43B', 'VIT', 'POU3F1', 'TSPAN32', 'SEZ6L', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.5206345020460146e-15 NRMSE: 6.410728914891057e-16 MAPE: 4.667808305075573e-12 Pearson Correlation: 0.22242447495004117 Spearman Correlation: 0.19266325016521402 Coefficient of Determination: -0.40021388033990646 RMSE: 0.6249582593151871 NRMSE: 0.16739206088527847 MAPE: 316.7157757170287 Predictor: ElasticNet Pearson Correlation: 0.7791256992211404 Spearman Correlation: 0.731323412137043 Coefficient of Determination: 0.5522352926474181 RMSE: 0.28358198723594696 NRMSE: 0.07212339765404689 MAPE: 850.1267951210309 Pearson Correlation: 0.4362440612061021 Spearman Correlation: 0.4012743301038667 Coefficient of Determination: 0.18801390326898904 RMSE: 0.4759136039680115 NRMSE: 0.12747116752859555 MAPE: 205.43325812860155 Predictor: RandomForests Pearson Correlation: 0.515307760679544 Spearman Correlation: 0.5438436190356488 Coefficient of Determination: 0.23864448682466244 RMSE: 0.3697834416405663 NRMSE: 0.09404701076847487 MAPE: 860.64858674498 Pearson Correlation: 0.43566242762905866 Spearman Correlation: 0.4369755233855784 Coefficient of Determination: 0.1631633643980812 RMSE: 0.4831413017528265 NRMSE: 0.12940707158238288 MAPE: 169.4269332274583 Protein: CTNNB1 x_train_column_count: 994 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'PPP1R3G', 'SLC28A3', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'METTL7B', 'HEPACAM2', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'LRIT3', 'ALOXE3', 'GLIS1', 'SGK2', 'ZNF843', 'S100A3', 'LINC00482', 'NR1I3', 'CCDC36', 'WNT2B', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'BCHE', 'FCRL6', 'CKMT2', 'ABCA17P', 'LPAR3', 'DQX1', 'FAM189A1', 'PITX2', 'NLRP12', 'ADCYAP1', 'ENPP6', 'C2ORF50', 'CACNA1G', 'C1ORF101', 'SLC6A20', 'FAM95B1', 'FAM90A1', 'ZNF835', 'OTOA', 'SPIB', 'CLDN9', 'CA3', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'CLECL1', 'ULBP3', 'PCSK1N', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'SCN2B', 'LINC01550', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'PCYT1B', 'GSTM1', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'JPH3', 'CAMP', 'CPEB1', 'LOC90768', 'LOC441455', 'OR7E91P', 'FLJ37201', 'RELN', 'SCARA5', 'IL12RB2', 'LBX2', 'FUT7', 'RIMS1', 'PLA2G5', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'HOXB13', 'MNX1', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'BTBD8', 'WDR72', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'HOXB8', 'LINC01124', 'RSPH4A', 'MGC16142', 'ALB', 'CCDC183', 'SCART1', 'GBP1P1', 'CELF5', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'SKIDA1', 'CCDC153', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'NIPAL1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'PPP4R4', 'NOXO1', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'ULBP2', 'CXCR2P1', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'DBIL5P', 'ORM1', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'SUCNR1', 'DEPDC4', 'BRINP1', 'CTCFL', 'BDKRB1', 'VWDE', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'RDM1', 'CECR2', 'HCG27', 'KIAA0319', 'CYP4F8', 'CDR1', 'NUGGC', 'CLEC12A', 'ECEL1', 'PKD1L1', 'CBLN2', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'SPESP1', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'GPR87', 'TRAT1', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'WIPF3', 'SLC13A2', 'ZSCAN1', 'CA9', 'EMX1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'CITED1', 'TMEM40', 'MAPT.IT1', 'GZMM', 'ANKK1', 'WFDC3', 'ROPN1L', 'FIRRE', 'M1AP', 'CDHR1', 'MYO3B', 'PVALB', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'TTC23L', 'RBM12B.AS1', 'IGSF22', 'RFX8', 'MROH7', 'KCNT2', 'HEATR4', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'CIDEC', 'MIA', 'CCBE1', 'SRSF12', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KCNA6', 'KLK6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'SMC1B', 'DHDH', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'TUSC5', 'ADGRG2', 'TMPRSS4', 'C9ORF47', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'VENTX', 'FAM157A', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'DLX5', 'FAM19A2', 'CCNI2', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'CD160', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'OR2W3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'MYO16', 'CDKL2', 'CACNA1I', 'PWAR5', 'DLK2', 'DCX', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'SLC39A2', 'XCL2', 'LY6H', 'AGBL4', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'HRCT1', 'P2RY12', 'PCBP3', 'TM6SF2', 'LINC00202.1', 'ZNF727', 'ARL9', 'KCNH3', 'MAK', 'MPL', 'SNORD116.4', 'GRID2IP', 'SYCE3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'CD70', 'ELOVL3', 'GPM6A', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'GRIN2A', 'PGLYRP2', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'LRRC43', 'AGAP7P', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'SCN2A', 'KLK10', 'SCN9A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'TTYH1', 'GABRB3', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'IL17D', 'SLC35F3', 'GPR63', 'CAPSL', 'GBP6', 'ANKLE1', 'MUC15', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'HAMP', 'FAM201A', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'MTUS2', 'LOC100132215', 'RUNDC3A', 'RRN3P1', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'CYP2E1', 'FOLR1', 'LINC00961', 'PNMA6A', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'KIF19', 'CCR10', 'DPEP1', 'IL1RL1', 'GLI1', 'ARRDC3.AS1', 'IL24', 'KISS1R', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'KIAA1210', 'NIPAL4', 'PRRT4', 'RHBG', 'A2ML1', 'WBP2NL', 'GPR135', 'CBLN1', 'LOC90246', 'GNMT', 'DPF3', 'PCDHB18P', 'IL18RAP', 'MAP7D2', 'CD300LB', 'B3GALT5', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'MASP2', 'GABRB2', 'PCDH20', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'ANK1', 'GPR171', 'CRB2', 'KCNB1', 'CD19', 'SLC26A3', 'SEPHS1P1', 'LINC01465', 'HIST1H2AG', 'UCA1', 'RASAL1', 'TYMSOS', 'LINC00685', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'RIC3', 'CST2', 'MED12L', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'NRXN1', 'SEC14L1P1', 'FAM182B', 'EYA1', 'IL6', 'MYEOV', 'ARHGEF33', 'MAPT.AS1', 'RAB3B', 'STXBP6', 'KCNRG', 'CR2', 'CXCR2', 'MSLN', 'PATL2', 'KIF4B', 'LPAR4', 'CLEC4F', 'AJAP1', 'ZNF676', 'TDRD9', 'VSTM2A', 'CLDN14', 'FNDC8', 'MKX', 'ABHD1', 'TRABD2A', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 3.505066924898016e-15 NRMSE: 6.894309451018914e-16 MAPE: 2.9980330631362716e-12 Pearson Correlation: 0.3329932337176217 Spearman Correlation: 0.34779236648836026 Coefficient of Determination: -0.7332124994348936 RMSE: 0.8921467624541993 NRMSE: 0.28572560200814096 MAPE: 409.47072359204446 Predictor: ElasticNet Pearson Correlation: 0.8925139943125827 Spearman Correlation: 0.8788137194036824 Coefficient of Determination: 0.7375450929029271 RMSE: 0.38729162970256614 NRMSE: 0.07617852669208619 MAPE: 293.98029278724886 Pearson Correlation: 0.4271293461988809 Spearman Correlation: 0.4393047294854051 Coefficient of Determination: 0.12011980114529208 RMSE: 0.6356560279074688 NRMSE: 0.20357995891207337 MAPE: 261.38367871284356 Predictor: RandomForests Pearson Correlation: 0.503348825734335 Spearman Correlation: 0.5217043825203944 Coefficient of Determination: 0.21028309652954302 RMSE: 0.6718100235950104 NRMSE: 0.13214201880310986 MAPE: 674.2498899444593 Pearson Correlation: 0.43819189877109105 Spearman Correlation: 0.43644185089589643 Coefficient of Determination: 0.17483855100476708 RMSE: 0.6155734249046547 NRMSE: 0.19714815410780034 MAPE: 238.0807450521627 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'PPP1R3G', 'SLC28A3', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'METTL7B', 'HEPACAM2', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'LRIT3', 'ALOXE3', 'GLIS1', 'SGK2', 'ZNF843', 'S100A3', 'LINC00482', 'NR1I3', 'CCDC36', 'WNT2B', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'BCHE', 'FCRL6', 'CKMT2', 'ABCA17P', 'LPAR3', 'DQX1', 'FAM189A1', 'PITX2', 'NLRP12', 'ADCYAP1', 'ENPP6', 'C2ORF50', 'CACNA1G', 'C1ORF101', 'SLC6A20', 'FAM95B1', 'FAM90A1', 'ZNF835', 'OTOA', 'SPIB', 'CLDN9', 'CA3', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'CLECL1', 'ULBP3', 'PCSK1N', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'SCN2B', 'LINC01550', 'ALDH8A1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.9181262408533604 Spearman Correlation: 0.8376209687922062 Coefficient of Determination: 0.842955794143522 RMSE: 0.1778513315483808 NRMSE: 0.06334864881509555 MAPE: 39.03137652120223 Pearson Correlation: 0.35809007214986016 Spearman Correlation: 0.3673487200588536 Coefficient of Determination: -0.15982522682746336 RMSE: 0.6979682781108703 NRMSE: 0.1684408326159882 MAPE: 116.51837005164829 Predictor: ElasticNet Pearson Correlation: 0.8057860840137404 Spearman Correlation: 0.7068597363858627 Coefficient of Determination: 0.6285551357381172 RMSE: 0.27352267880491393 NRMSE: 0.09742570928046801 MAPE: 52.860907497993004 Pearson Correlation: 0.5209748437929314 Spearman Correlation: 0.5628224790832804 Coefficient of Determination: 0.2614461980720715 RMSE: 0.556968300923416 NRMSE: 0.13441327821111954 MAPE: 88.7650779397453 Predictor: RandomForests Pearson Correlation: 0.6571475276758021 Spearman Correlation: 0.5948774223288916 Coefficient of Determination: 0.3807723482595653 RMSE: 0.35315985755353496 NRMSE: 0.12579157882583614 MAPE: 77.72811600763156 Pearson Correlation: 0.48861335235576847 Spearman Correlation: 0.5333757278769062 Coefficient of Determination: 0.19700485914631716 RMSE: 0.5807588922100257 NRMSE: 0.1401546666529975 MAPE: 95.6943259095444 Protein: CCND1 x_train_column_count: 859 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'PPP1R3G', 'SLC28A3', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'METTL7B', 'HEPACAM2', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'LRIT3', 'ALOXE3', 'GLIS1', 'SGK2', 'ZNF843', 'S100A3', 'LINC00482', 'NR1I3', 'CCDC36', 'WNT2B', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'BCHE', 'FCRL6', 'CKMT2', 'ABCA17P', 'LPAR3', 'DQX1', 'FAM189A1', 'PITX2', 'NLRP12', 'ADCYAP1', 'ENPP6', 'C2ORF50', 'CACNA1G', 'C1ORF101', 'SLC6A20', 'FAM95B1', 'FAM90A1', 'ZNF835', 'OTOA', 'SPIB', 'CLDN9', 'CA3', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'CLECL1', 'ULBP3', 'PCSK1N', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'SCN2B', 'LINC01550', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'PCYT1B', 'GSTM1', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'JPH3', 'CAMP', 'CPEB1', 'LOC90768', 'LOC441455', 'OR7E91P', 'FLJ37201', 'RELN', 'SCARA5', 'IL12RB2', 'LBX2', 'FUT7', 'RIMS1', 'PLA2G5', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'HOXB13', 'MNX1', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'BTBD8', 'WDR72', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'HOXB8', 'LINC01124', 'RSPH4A', 'MGC16142', 'ALB', 'CCDC183', 'SCART1', 'GBP1P1', 'CELF5', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'SKIDA1', 'CCDC153', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'NIPAL1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'PPP4R4', 'NOXO1', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'ULBP2', 'CXCR2P1', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'DBIL5P', 'ORM1', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'SUCNR1', 'DEPDC4', 'BRINP1', 'CTCFL', 'BDKRB1', 'VWDE', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'RDM1', 'CECR2', 'HCG27', 'KIAA0319', 'CYP4F8', 'CDR1', 'NUGGC', 'CLEC12A', 'ECEL1', 'PKD1L1', 'CBLN2', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'SPESP1', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'GPR87', 'TRAT1', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'WIPF3', 'SLC13A2', 'ZSCAN1', 'CA9', 'EMX1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'CITED1', 'TMEM40', 'MAPT.IT1', 'GZMM', 'ANKK1', 'WFDC3', 'ROPN1L', 'FIRRE', 'M1AP', 'CDHR1', 'MYO3B', 'PVALB', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'TTC23L', 'RBM12B.AS1', 'IGSF22', 'RFX8', 'MROH7', 'KCNT2', 'HEATR4', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'CIDEC', 'MIA', 'CCBE1', 'SRSF12', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KCNA6', 'KLK6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'SMC1B', 'DHDH', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'TUSC5', 'ADGRG2', 'TMPRSS4', 'C9ORF47', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'VENTX', 'FAM157A', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'DLX5', 'FAM19A2', 'CCNI2', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'CD160', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'OR2W3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'MYO16', 'CDKL2', 'CACNA1I', 'PWAR5', 'DLK2', 'DCX', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'SLC39A2', 'XCL2', 'LY6H', 'AGBL4', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'HRCT1', 'P2RY12', 'PCBP3', 'TM6SF2', 'LINC00202.1', 'ZNF727', 'ARL9', 'KCNH3', 'MAK', 'MPL', 'SNORD116.4', 'GRID2IP', 'SYCE3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'CD70', 'ELOVL3', 'GPM6A', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'GRIN2A', 'PGLYRP2', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'LRRC43', 'AGAP7P', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'SCN2A', 'KLK10', 'SCN9A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'TTYH1', 'GABRB3', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'IL17D', 'SLC35F3', 'GPR63', 'CAPSL', 'GBP6', 'ANKLE1', 'MUC15', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'HAMP', 'FAM201A', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.2327285214143792e-15 NRMSE: 7.764338666572478e-16 MAPE: 3.810592169305893e-12 Pearson Correlation: 0.009155399335530695 Spearman Correlation: -0.0444419506477637 Coefficient of Determination: -1.0834228659302925 RMSE: 0.3983209856978665 NRMSE: 0.2544824278362572 MAPE: 444.4498134935044 Predictor: ElasticNet Pearson Correlation: 0.5980790057115857 Spearman Correlation: 0.5989501024317093 Coefficient of Determination: 0.27698733117764684 RMSE: 0.19354458420971493 NRMSE: 0.12190402613229047 MAPE: 649.0302145818841 Pearson Correlation: 0.162964673897179 Spearman Correlation: 0.13349044252422101 Coefficient of Determination: 0.01944929468084089 RMSE: 0.27326216386818625 NRMSE: 0.17458386927600353 MAPE: 251.15676800769674 Predictor: RandomForests Pearson Correlation: 0.5163933400937986 Spearman Correlation: 0.5403173743513804 Coefficient of Determination: 0.15814269497982614 RMSE: 0.20884655322076387 NRMSE: 0.13154196892368983 MAPE: 647.613918001873 Pearson Correlation: 0.1700641721891928 Spearman Correlation: 0.12701654634097684 Coefficient of Determination: 0.026369009683008482 RMSE: 0.27229625557479187 NRMSE: 0.17396676222817997 MAPE: 263.3663073235089 Protein: ERBB2 x_train_column_count: 666 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'PPP1R3G', 'SLC28A3', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'METTL7B', 'HEPACAM2', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'LRIT3', 'ALOXE3', 'GLIS1', 'SGK2', 'ZNF843', 'S100A3', 'LINC00482', 'NR1I3', 'CCDC36', 'WNT2B', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'BCHE', 'FCRL6', 'CKMT2', 'ABCA17P', 'LPAR3', 'DQX1', 'FAM189A1', 'PITX2', 'NLRP12', 'ADCYAP1', 'ENPP6', 'C2ORF50', 'CACNA1G', 'C1ORF101', 'SLC6A20', 'FAM95B1', 'FAM90A1', 'ZNF835', 'OTOA', 'SPIB', 'CLDN9', 'CA3', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'CLECL1', 'ULBP3', 'PCSK1N', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'SCN2B', 'LINC01550', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'PCYT1B', 'GSTM1', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'JPH3', 'CAMP', 'CPEB1', 'LOC90768', 'LOC441455', 'OR7E91P', 'FLJ37201', 'RELN', 'SCARA5', 'IL12RB2', 'LBX2', 'FUT7', 'RIMS1', 'PLA2G5', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'HOXB13', 'MNX1', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'BTBD8', 'WDR72', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'HOXB8', 'LINC01124', 'RSPH4A', 'MGC16142', 'ALB', 'CCDC183', 'SCART1', 'GBP1P1', 'CELF5', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'SKIDA1', 'CCDC153', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'NIPAL1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'PPP4R4', 'NOXO1', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'ULBP2', 'CXCR2P1', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'DBIL5P', 'ORM1', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'SUCNR1', 'DEPDC4', 'BRINP1', 'CTCFL', 'BDKRB1', 'VWDE', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'RDM1', 'CECR2', 'HCG27', 'KIAA0319', 'CYP4F8', 'CDR1', 'NUGGC', 'CLEC12A', 'ECEL1', 'PKD1L1', 'CBLN2', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'SPESP1', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'GPR87', 'TRAT1', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'WIPF3', 'SLC13A2', 'ZSCAN1', 'CA9', 'EMX1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'CITED1', 'TMEM40', 'MAPT.IT1', 'GZMM', 'ANKK1', 'WFDC3', 'ROPN1L', 'FIRRE', 'M1AP', 'CDHR1', 'MYO3B', 'PVALB', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'TTC23L', 'RBM12B.AS1', 'IGSF22', 'RFX8', 'MROH7', 'KCNT2', 'HEATR4', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'CIDEC', 'MIA', 'CCBE1', 'SRSF12', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KCNA6', 'KLK6', 'GALNT13', 'ABCC6P2', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 5.979831148629139e-15 NRMSE: 1.018762653735138e-15 MAPE: 4.615887840297256e-12 Pearson Correlation: 0.17864560646050062 Spearman Correlation: 0.1359742640182546 Coefficient of Determination: -2.9463610270731846 RMSE: 1.7237653809358962 NRMSE: 0.38140621328374735 MAPE: 1248.8687027977983 Predictor: ElasticNet Pearson Correlation: 0.9116592051301405 Spearman Correlation: 0.8103161714378107 Coefficient of Determination: 0.8040339657822819 RMSE: 0.45504029796567963 NRMSE: 0.07752360392621081 MAPE: 803.2166026470924 Pearson Correlation: 0.4868917784123089 Spearman Correlation: 0.36825147445728756 Coefficient of Determination: 0.18565240480528367 RMSE: 0.7830412783921302 NRMSE: 0.1732583866339485 MAPE: 588.5064938987255 Predictor: RandomForests Pearson Correlation: 0.6307742694154364 Spearman Correlation: 0.5445033226490511 Coefficient of Determination: 0.29848530460230416 RMSE: 0.8609498282241023 NRMSE: 0.1466769729669493 MAPE: 513.0101351248974 Pearson Correlation: 0.4714934248274261 Spearman Correlation: 0.4410204616017656 Coefficient of Determination: 0.18327630812854034 RMSE: 0.7841828219843178 NRMSE: 0.17351096846649358 MAPE: 815.6863277205272 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.7622112110771894 Spearman Correlation: 0.7525562129500548 Coefficient of Determination: 0.5809659302917556 RMSE: 0.3035389007627274 NRMSE: 0.08191643725700852 MAPE: 184.67583319976535 Pearson Correlation: 0.24577084657945716 Spearman Correlation: 0.27782141921969106 Coefficient of Determination: -0.5527650634152341 RMSE: 0.5195856071328258 NRMSE: 0.2513913061160156 MAPE: 349.0637642406273 Predictor: ElasticNet Pearson Correlation: 0.6308100718621289 Spearman Correlation: 0.6190842130468407 Coefficient of Determination: 0.36359983189179723 RMSE: 0.3740716820026206 NRMSE: 0.1009512105084161 MAPE: 198.64214064220647 Pearson Correlation: 0.4138184955360135 Spearman Correlation: 0.4268507088617065 Coefficient of Determination: 0.11773651727852641 RMSE: 0.3916547416429271 NRMSE: 0.18949446577525453 MAPE: 249.60818968480035 Predictor: RandomForests Pearson Correlation: 0.493641873259135 Spearman Correlation: 0.5034521606787914 Coefficient of Determination: 0.1843458749584045 RMSE: 0.42348955963618334 NRMSE: 0.1142876773084611 MAPE: 222.0896541662142 Pearson Correlation: 0.4562205180780658 Spearman Correlation: 0.4573897430142521 Coefficient of Determination: 0.11990478752060951 RMSE: 0.39117317590796924 NRMSE: 0.18926146963866058 MAPE: 233.66592497599362
Unnormalized
scenario = Scenario.NMostVariableGenes_Mutations
normalizeTechnique = NormalizeTechnique.UN
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 10.7401 | 141.1933 | 314.4482 | 0.0000 | 0.0 | 0.000 | 2.9988 | 9.4249 | 0.0 | 0.0000 | ... | 74.1138 | 533.3625 | 1053.4444 | 94.6772 | 881.2262 | 5343.4779 | 934.3482 | 508.0867 | 52.2652 | 0.8568 |
| TCGA-A1-A0SH-01 | 3.0048 | 79.8003 | 95.7054 | 0.0000 | 0.0 | 0.000 | 0.3612 | 3.9727 | 0.0 | 0.0000 | ... | 87.7601 | 581.0946 | 801.3977 | 19.8634 | 1353.2389 | 5464.9614 | 1312.7898 | 1001.1151 | 455.7746 | 0.0000 |
| TCGA-A1-A0SJ-01 | 4.9419 | 134.8733 | 63.6488 | 0.3658 | 0.0 | 0.000 | 0.3658 | 4.7554 | 0.0 | 0.7316 | ... | 83.7677 | 2731.4129 | 834.3850 | 51.2117 | 1092.6383 | 3032.0988 | 958.3905 | 718.7929 | 43.5299 | 0.0000 |
| TCGA-A1-A0SK-01 | 28.8560 | 1119.1932 | 166.7192 | 0.3152 | 0.0 | 1.891 | 0.0000 | 3.4668 | 0.0 | 0.0000 | ... | 69.0199 | 610.1481 | 1775.6067 | 158.5251 | 1380.7123 | 591.2386 | 1798.9285 | 1335.6445 | 49.4800 | 0.0000 |
| TCGA-A1-A0SQ-01 | 1.0368 | 41.5532 | 75.8447 | 0.0000 | 0.0 | 0.000 | 0.4034 | 5.6480 | 0.0 | 0.0000 | ... | 106.1019 | 617.2466 | 875.0378 | 25.4160 | 969.4402 | 2903.0761 | 715.6833 | 691.4776 | 17.7509 | 0.0000 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 371 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.8438309468618949 Spearman Correlation: 0.7613187153472735 Coefficient of Determination: 0.712050666881842 RMSE: 0.1202551379138592 NRMSE: 0.045542563118295465 MAPE: 252.72170238946578 Pearson Correlation: 0.2012212368415188 Spearman Correlation: 0.049346405228758175 Coefficient of Determination: -39.50626265134494 RMSE: 1.7850142873153105 NRMSE: 0.8818238477422577 MAPE: 724.4365657065164 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 3.9545212166987835, tolerance: 0.0026969040165678213 positive)
Pearson Correlation: 0.8408961587837653 Spearman Correlation: 0.7620813969239181 Coefficient of Determination: 0.7070986512587767 RMSE: 0.1212847753028672 NRMSE: 0.045932503428467025 MAPE: 255.2699011290592 Pearson Correlation: 0.19684452406501043 Spearman Correlation: 0.048985464832699256 Coefficient of Determination: -38.710500991260254 RMSE: 1.7673936587395893 NRMSE: 0.8731189927723575 MAPE: 660.2064731683638 Predictor: RandomForests Pearson Correlation: 0.577559772956092 Spearman Correlation: 0.43276361054314455 Coefficient of Determination: 0.18808029390619674 RMSE: 0.20193060354936967 NRMSE: 0.07647438119650432 MAPE: 206.6330367833719 Pearson Correlation: 0.027188237205427474 Spearman Correlation: 0.28332357818749393 Coefficient of Determination: -0.057810554944102366 RMSE: 0.28845930806150966 NRMSE: 0.1425032274304351 MAPE: 144.32961962756823 Protein: CDH1 x_train_column_count: 835 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 1.2866099827678258e-14 NRMSE: 2.1626241453075584e-15 MAPE: 1.395281571156612e-11 Pearson Correlation: 0.25280304701881057 Spearman Correlation: 0.32694859038142626 Coefficient of Determination: -6.54479220766013 RMSE: 3.187101703213233 NRMSE: 0.5161967061665047 MAPE: 1619.7531671482834 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.09857598901057654, tolerance: 0.06837930598298066 positive)
Pearson Correlation: 0.999999961199618 Spearman Correlation: 0.9999990700895225 Coefficient of Determination: 0.9999999149156091 RMSE: 0.0003291547664638528 NRMSE: 5.5326637833669974e-05 MAPE: 0.1381456233231019 Pearson Correlation: 0.06917167277563468 Spearman Correlation: 0.3722222222222223 Coefficient of Determination: -59.562634002357775 RMSE: 9.029727793067835 NRMSE: 1.462493568894405 MAPE: 1790.2115782728813 Predictor: RandomForests Pearson Correlation: 0.7593882774131262 Spearman Correlation: 0.7023766577683125 Coefficient of Determination: 0.5701342862065168 RMSE: 0.7398464682326789 NRMSE: 0.12435857466133475 MAPE: 244.28734120831314 Pearson Correlation: 0.7792919388828009 Spearman Correlation: 0.7149530715948536 Coefficient of Determination: 0.6004457710203155 RMSE: 0.7334324932864278 NRMSE: 0.11878988262227136 MAPE: 161.23167163665545 Protein: CDH2 x_train_column_count: 474 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.9287480304854615 Spearman Correlation: 0.9140457896100245 Coefficient of Determination: 0.8625729041306235 RMSE: 0.13760609590075834 NRMSE: 0.05083587165277917 MAPE: 278.6584146724888 Pearson Correlation: 0.04749076705467398 Spearman Correlation: -0.024324456150619456 Coefficient of Determination: -220.83292827973708 RMSE: 5.586983976951756 NRMSE: 2.8833070015749374 MAPE: 1114.6465780452838 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 5.515174384566014, tolerance: 0.007399072171665535 positive)
Pearson Correlation: 0.9227012397482321 Spearman Correlation: 0.9032809511481794 Coefficient of Determination: 0.8513737098114819 RMSE: 0.14310318760865182 NRMSE: 0.05286666430550851 MAPE: 815.8810750286447 Pearson Correlation: 0.040492535343937826 Spearman Correlation: 0.027231489610769682 Coefficient of Determination: -85.61784649483988 RMSE: 3.491146798925326 NRMSE: 1.801696237253097 MAPE: 813.2643884816954 Predictor: RandomForests Pearson Correlation: 0.5460672511423272 Spearman Correlation: 0.45927566127442093 Coefficient of Determination: 0.1744161212092905 RMSE: 0.33727340011241586 NRMSE: 0.1245990387836933 MAPE: 654.2974133124524 Pearson Correlation: 0.08505653152442219 Spearman Correlation: 0.16887132962637794 Coefficient of Determination: 0.0057782262840763154 RMSE: 0.3740296706339855 NRMSE: 0.19302764650564355 MAPE: 111.26536856061935 Protein: CDH3 x_train_column_count: 75 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.5494493958437898 Spearman Correlation: 0.5458068195024937 Coefficient of Determination: 0.3018946385931055 RMSE: 0.17445784685913326 NRMSE: 0.12239563819605803 MAPE: 400.9980986377613 Pearson Correlation: 0.3732125281840606 Spearman Correlation: 0.4761389132767536 Coefficient of Determination: -0.10112540419212057 RMSE: 0.21467433868612334 NRMSE: 0.16431128631707628 MAPE: 360.33119195272053 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 7.930612692297163, tolerance: 0.002341177429816801 positive)
Pearson Correlation: 0.5490107678012566 Spearman Correlation: 0.5457348676779017 Coefficient of Determination: 0.30141282265783775 RMSE: 0.17451803983058864 NRMSE: 0.1224378682091462 MAPE: 400.74916140106626 Pearson Correlation: 0.37443372093593696 Spearman Correlation: 0.4787289044971223 Coefficient of Determination: -0.09947253547034896 RMSE: 0.21451315733735946 NRMSE: 0.1641879184524875 MAPE: 359.92373007446304 Predictor: RandomForests Pearson Correlation: 0.5657934990786441 Spearman Correlation: 0.5571021323215752 Coefficient of Determination: 0.25409865282941424 RMSE: 0.18033113545539403 NRMSE: 0.12651620324366758 MAPE: 343.38623203302916 Pearson Correlation: 0.43797716757098015 Spearman Correlation: 0.48281143303092394 Coefficient of Determination: 0.17428124611482132 RMSE: 0.18589932666740486 NRMSE: 0.14228695277296374 MAPE: 306.6549196515722 Protein: PTEN x_train_column_count: 886 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 7.043366290575643e-15 NRMSE: 1.1013003347002803e-15 MAPE: 1.0024006233905596e-11 Pearson Correlation: 0.02337878331510212 Spearman Correlation: 0.005955516534972199 Coefficient of Determination: -13.921385220882211 RMSE: 1.9185331127133785 NRMSE: 0.6323027858128595 MAPE: 909.9251309162277 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.05164735646812941, tolerance: 0.021075629727119613 positive)
Pearson Correlation: 0.9999998456082421 Spearman Correlation: 0.9999975977312664 Coefficient of Determination: 0.9999996620447237 RMSE: 0.00036419397158627954 NRMSE: 5.694534775799852e-05 MAPE: 0.5341598089446079 Pearson Correlation: -0.00023558938712480283 Spearman Correlation: 0.0019022534386889086 Coefficient of Determination: -65.87746872061574 RMSE: 4.061670058091542 NRMSE: 1.3386296414513024 MAPE: 1491.415970513106 Predictor: RandomForests Pearson Correlation: 0.6109223910560806 Spearman Correlation: 0.5572613036504848 Coefficient of Determination: 0.30657927509830507 RMSE: 0.521676827320073 NRMSE: 0.08156935772341069 MAPE: 296.11836539421944 Pearson Correlation: 0.30206440179406935 Spearman Correlation: 0.3323383084577115 Coefficient of Determination: 0.07860989007275843 RMSE: 0.47674538878222045 NRMSE: 0.15712391694094668 MAPE: 183.90578322526792 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.8540514570557396 Spearman Correlation: 0.8249825588492489 Coefficient of Determination: 0.7294038912990317 RMSE: 0.10279509397956896 NRMSE: 0.06649702688443258 MAPE: 196.3475131829148 Pearson Correlation: 0.07433580626100594 Spearman Correlation: 0.04093020306583262 Coefficient of Determination: -10.602306453536798 RMSE: 0.6292461512866703 NRMSE: 0.6297499512476685 MAPE: 958.1851982979853 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 2.8597036441851222, tolerance: 0.002096995577721637 positive)
Pearson Correlation: 0.8524741826892555 Spearman Correlation: 0.8224611450914894 Coefficient of Determination: 0.7267115243438742 RMSE: 0.10330522158247626 NRMSE: 0.06682702287560081 MAPE: 209.39826715751983 Pearson Correlation: 0.060861804289468885 Spearman Correlation: 0.0462979786094123 Coefficient of Determination: -10.390601337832221 RMSE: 0.6234788530509635 NRMSE: 0.623978035479347 MAPE: 951.1665631175908 Predictor: RandomForests Pearson Correlation: 0.5555466573700903 Spearman Correlation: 0.4563197080576792 Coefficient of Determination: 0.17958233452907224 RMSE: 0.1789901434183375 NRMSE: 0.11578677462275852 MAPE: 167.35609018237992 Pearson Correlation: 0.22566002475071836 Spearman Correlation: 0.25322926205908747 Coefficient of Determination: 0.04244053133126968 RMSE: 0.1807720484235457 NRMSE: 0.18091678184902493 MAPE: 114.56859313707044 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.2715407185725292e-14 NRMSE: 2.874512758161024e-15 MAPE: 9.909377696636298e-12 Pearson Correlation: 0.16019646627196843 Spearman Correlation: 0.2053653302116867 Coefficient of Determination: -33.65505625944023 RMSE: 4.396685039587802 NRMSE: 1.1873305534938705 MAPE: 1419.0384644985297 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.2013140735165605, tolerance: 0.02218251593097602 positive)
Pearson Correlation: 0.9994184800098268 Spearman Correlation: 0.9992734493059585 Coefficient of Determination: 0.9988320198227081 RMSE: 0.02196524209167848 NRMSE: 0.004965579765271499 MAPE: 14.851609610104882 Pearson Correlation: 0.11425177535753332 Spearman Correlation: 0.1846697883133353 Coefficient of Determination: -100.91432563610154 RMSE: 7.539797276742914 NRMSE: 2.0361321298252535 MAPE: 2045.381002965112 Predictor: RandomForests Pearson Correlation: 0.6515079912322985 Spearman Correlation: 0.5911619132136582 Coefficient of Determination: 0.4138667117288445 RMSE: 0.49205817517922873 NRMSE: 0.11123729516880947 MAPE: 174.7850480807136 Pearson Correlation: 0.6912638159353723 Spearman Correlation: 0.5679212267276245 Coefficient of Determination: 0.436474169977181 RMSE: 0.5606592157960325 NRMSE: 0.15140675554848299 MAPE: 337.74724839935055 Protein: TP53 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 3.121939820580451e-15 NRMSE: 7.502859458256311e-16 MAPE: 5.069538609027722e-12 Pearson Correlation: 0.1695594457481716 Spearman Correlation: 0.2937762169544435 Coefficient of Determination: -5.665639050816655 RMSE: 1.0859978719234722 NRMSE: 0.3905202890875156 MAPE: 1553.3994405395258 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.03313582504544052, tolerance: 0.011010946742365387 positive)
Pearson Correlation: 0.9999997956273604 Spearman Correlation: 0.9999972683879195 Coefficient of Determination: 0.9999995519691515 RMSE: 0.00030309526169466406 NRMSE: 7.284192782856623e-05 MAPE: 1.614992087094604 Pearson Correlation: 0.12021124626566213 Spearman Correlation: 0.22175397522192958 Coefficient of Determination: -20.325760555680315 RMSE: 1.9424969352078683 NRMSE: 0.6985137672004992 MAPE: 1468.3150807883444 Predictor: RandomForests Pearson Correlation: 0.6587497905889853 Spearman Correlation: 0.569611688258932 Coefficient of Determination: 0.38305446569890156 RMSE: 0.3556711184894722 NRMSE: 0.08547731758939492 MAPE: 599.2266866471739 Pearson Correlation: 0.5311455536845011 Spearman Correlation: 0.5154570285825774 Coefficient of Determination: 0.280552395622339 RMSE: 0.35678588389047716 NRMSE: 0.12829871045002594 MAPE: 474.75252734092 Protein: CTNNB1 x_train_column_count: 993 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 6.09703401845532e-15 NRMSE: 1.2288195615324023e-15 MAPE: 5.716524829632564e-12 Pearson Correlation: 0.19014822634940975 Spearman Correlation: 0.2503658179689787 Coefficient of Determination: -4.164523025555744 RMSE: 1.7065956035964103 NRMSE: 0.4234098158081701 MAPE: 694.4821081010074 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.05770476158414565, tolerance: 0.02918679256026189 positive)
Pearson Correlation: 0.9999999168331893 Spearman Correlation: 0.9999988957312866 Coefficient of Determination: 0.9999998161219364 RMSE: 0.00031613385241462317 NRMSE: 6.371482605047125e-05 MAPE: 0.14857076189226698 Pearson Correlation: 0.03491519783513444 Spearman Correlation: 0.20867232465125357 Coefficient of Determination: -33.303704497463876 RMSE: 4.398311912888712 NRMSE: 1.0912300682004445 MAPE: 1135.9898823580684 Predictor: RandomForests Pearson Correlation: 0.6847938221942541 Spearman Correlation: 0.674270028466305 Coefficient of Determination: 0.45478147688268555 RMSE: 0.5443664407975737 NRMSE: 0.10971369506370271 MAPE: 356.94316861810137 Pearson Correlation: 0.5561474601653553 Spearman Correlation: 0.495771144278607 Coefficient of Determination: 0.3004470954537345 RMSE: 0.6280956643559193 NRMSE: 0.15583180279757838 MAPE: 227.99689495389867 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 0.9504346529840199 Spearman Correlation: 0.8554776088203567 Coefficient of Determination: 0.903326029592854 RMSE: 0.15038515590537935 NRMSE: 0.0362924815757365 MAPE: 38.019547122936345 Pearson Correlation: 0.3855921233611785 Spearman Correlation: 0.5096039410789192 Coefficient of Determination: -4.467299692855187 RMSE: 1.2557208059531113 NRMSE: 0.4472736619601465 MAPE: 98.89735776873655 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 6.103633396134064, tolerance: 0.012562459394718587 positive)
Pearson Correlation: 0.9501181107724782 Spearman Correlation: 0.8538887017228728 Coefficient of Determination: 0.9027244155402034 RMSE: 0.1508523628565318 NRMSE: 0.03640523272836639 MAPE: 38.22173123800788 Pearson Correlation: 0.39687575613682985 Spearman Correlation: 0.4909813676714468 Coefficient of Determination: -4.276010424683178 RMSE: 1.2335577106354871 NRMSE: 0.43937941607675407 MAPE: 96.56371969276877 Predictor: RandomForests Pearson Correlation: 0.8613811896815188 Spearman Correlation: 0.7210897461488589 Coefficient of Determination: 0.7345647448360589 RMSE: 0.2491893603981484 NRMSE: 0.06013692120523889 MAPE: 54.35854172690294 Pearson Correlation: 0.8432726617633344 Spearman Correlation: 0.7061761327639762 Coefficient of Determination: 0.7047662045574807 RMSE: 0.2918029544050486 NRMSE: 0.10393693834552042 MAPE: 44.17084508270032 Protein: CCND1 x_train_column_count: 858 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 3.757293149691726e-15 NRMSE: 2.2587759854346623e-15 MAPE: 7.78847906943982e-12 Pearson Correlation: 0.1568062188211506 Spearman Correlation: 0.14917569017656815 Coefficient of Determination: -4.6441881036033985 RMSE: 0.5581760973929839 NRMSE: 0.3975386711533416 MAPE: 2721.162989371334 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.01857819494846012, tolerance: 0.0030646775987981157 positive)
Pearson Correlation: 0.9999991252902889 Spearman Correlation: 0.9999935487459373 Coefficient of Determination: 0.9999980650924117 RMSE: 0.0003323038462207132 NRMSE: 0.00019977146254145868 MAPE: 0.5076850154427982 Pearson Correlation: 0.030328654648254797 Spearman Correlation: 0.07126134035703834 Coefficient of Determination: -23.191806676759327 RMSE: 1.1555923203209226 NRMSE: 0.8230245572338631 MAPE: 8413.514220679026 Predictor: RandomForests Pearson Correlation: 0.5737828741003477 Spearman Correlation: 0.5573325176468438 Coefficient of Determination: 0.26460537977253884 RMSE: 0.20486391990199665 NRMSE: 0.12315826423993739 MAPE: 331.72164890333937 Pearson Correlation: 0.4793269993591618 Spearman Correlation: 0.48389425421910065 Coefficient of Determination: 0.21089893176033792 RMSE: 0.2087069017460154 NRMSE: 0.1486431697239583 MAPE: 1004.0050349507981 Protein: ERBB2 x_train_column_count: 664 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 5.836772108823219e-15 NRMSE: 9.943901918025146e-16 MAPE: 5.4373044174417365e-12 Pearson Correlation: 0.16987137447976905 Spearman Correlation: 0.16675934055214128 Coefficient of Determination: -6.600028534327266 RMSE: 2.500542748597966 NRMSE: 0.4636645185607206 MAPE: 1944.511352108662 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.06987898986422028, tolerance: 0.05577498909165362 positive)
Pearson Correlation: 0.9999886499848761 Spearman Correlation: 0.9999449415483442 Coefficient of Determination: 0.9999771934946858 RMSE: 0.00486700705127916 NRMSE: 0.0008291747536124777 MAPE: 11.167669291989844 Pearson Correlation: 0.12936201359343819 Spearman Correlation: 0.17157838259681985 Coefficient of Determination: -61.982078484458654 RMSE: 7.198386585476831 NRMSE: 1.3347648035373318 MAPE: 2873.8586457292104 Predictor: RandomForests Pearson Correlation: 0.8587373140196296 Spearman Correlation: 0.7172177649664015 Coefficient of Determination: 0.7316057354962123 RMSE: 0.5279821249824207 NRMSE: 0.08995044465346111 MAPE: 414.371657800436 Pearson Correlation: 0.8035139665143372 Spearman Correlation: 0.6791760763717333 Coefficient of Determination: 0.6374390547873258 RMSE: 0.5461565950715112 NRMSE: 0.10127138792351403 MAPE: 261.02744303369167 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.752779779589801 Spearman Correlation: 0.7411973798996361 Coefficient of Determination: 0.5666773965592695 RMSE: 0.30223797462442636 NRMSE: 0.0815653546309716 MAPE: 186.4778733879655 Pearson Correlation: 0.13389978684980372 Spearman Correlation: 0.2624503249079174 Coefficient of Determination: -10.887579013863956 RMSE: 1.6050338407124582 NRMSE: 0.644033224476943 MAPE: 1113.5287562265692 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 24.529790335591297, tolerance: 0.011320379923715432 positive)
Pearson Correlation: 0.7520388216521953 Spearman Correlation: 0.7403587556015006 Coefficient of Determination: 0.5655623784580839 RMSE: 0.3026265815159556 NRMSE: 0.08167022847734717 MAPE: 187.92915013982972 Pearson Correlation: 0.13337449057516887 Spearman Correlation: 0.2554266113388536 Coefficient of Determination: -10.991164538245755 RMSE: 1.6120116137972045 NRMSE: 0.6468331141649029 MAPE: 1113.5126558530403 Predictor: RandomForests Pearson Correlation: 0.5600591396801902 Spearman Correlation: 0.5559594921431007 Coefficient of Determination: 0.29193386267494714 RMSE: 0.38634942563656927 NRMSE: 0.10426462112405964 MAPE: 241.8881149414949 Pearson Correlation: 0.3640872903143947 Spearman Correlation: 0.42677839574023985 Coefficient of Determination: 0.12286800510860119 RMSE: 0.43598340785581574 NRMSE: 0.17494198119535492 MAPE: 316.35763402453387 Fold: 2 Protein: RB1 x_train_column_count: 371 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.8398543791832742 Spearman Correlation: 0.769150731359092 Coefficient of Determination: 0.7053553782333231 RMSE: 0.12758309697339412 NRMSE: 0.04665853458652506 MAPE: 657.127257209541 Pearson Correlation: -0.07634865039460959 Spearman Correlation: -0.01981270119988294 Coefficient of Determination: -65039.86009402333 RMSE: 62.4581450870699 NRMSE: 35.784020514873156 MAPE: 5634.512632035622 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 4.381499809563006, tolerance: 0.0029666208701464043 positive)
Pearson Correlation: 0.8395396245881134 Spearman Correlation: 0.7692395378096949 Coefficient of Determination: 0.7048230173411201 RMSE: 0.12769830287670914 NRMSE: 0.04670066664595858 MAPE: 667.4090200729155 Pearson Correlation: -0.07631743538950923 Spearman Correlation: -0.015525314603453324 Coefficient of Determination: -66937.6967819903 RMSE: 63.362830687166934 NRMSE: 36.30234023167314 MAPE: 5584.614835741999 Predictor: RandomForests Pearson Correlation: 0.5919941697037949 Spearman Correlation: 0.4659424433038884 Coefficient of Determination: 0.20517512574166707 RMSE: 0.20954611142544363 NRMSE: 0.07663330581679477 MAPE: 158.9565762710633 Pearson Correlation: 0.12670002504176972 Spearman Correlation: 0.18037774409552004 Coefficient of Determination: -0.00720703905609299 RMSE: 0.24578496924271334 NRMSE: 0.1408170923002563 MAPE: 228.54515441351117 Protein: CDH1 x_train_column_count: 835 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 1.7243601275553468e-14 NRMSE: 2.7662791811267294e-15 MAPE: 1.2709536248108706e-11 Pearson Correlation: 0.22658405485807556 Spearman Correlation: 0.3010535557506585 Coefficient of Determination: -4.33136782192574 RMSE: 2.656753203480039 NRMSE: 0.4718084183058141 MAPE: 1431.7254086467613 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.1039751357770025, tolerance: 0.0674331510902594 positive)
Pearson Correlation: 0.9999999365905401 Spearman Correlation: 0.9999981401790449 Coefficient of Determination: 0.9999998620425437 RMSE: 0.00041621926064064113 NRMSE: 6.677135808785451e-05 MAPE: 0.426580734609705 Pearson Correlation: 0.11619197098208411 Spearman Correlation: 0.26684713686469613 Coefficient of Determination: -85.70517878466357 RMSE: 10.714068254713945 NRMSE: 1.902693705330127 MAPE: 1468.3538273367612 Predictor: RandomForests Pearson Correlation: 0.7837942603044153 Spearman Correlation: 0.6811820052744563 Coefficient of Determination: 0.6103616281891473 RMSE: 0.6994882832578185 NRMSE: 0.11221437126138101 MAPE: 235.80472256955684 Pearson Correlation: 0.6776015948174685 Spearman Correlation: 0.6639489105768327 Coefficient of Determination: 0.419294694070961 RMSE: 0.8768186663575858 NRMSE: 0.15571278038671385 MAPE: 200.5190230885543 Protein: CDH2 x_train_column_count: 474 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.9630637141565092 Spearman Correlation: 0.9436427733263698 Coefficient of Determination: 0.9274917175249301 RMSE: 0.09911915806649951 NRMSE: 0.035915340990832496 MAPE: 382.34929050932345 Pearson Correlation: -0.0030727593058683766 Spearman Correlation: -0.0283630865281436 Coefficient of Determination: -110156.24850375518 RMSE: 128.47176644798006 NRMSE: 67.68190754673189 MAPE: 62432.95461439466 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 2.8110554324359414, tolerance: 0.007276153902921154 positive)
Pearson Correlation: 0.9610467134128176 Spearman Correlation: 0.9394654603144227 Coefficient of Determination: 0.9235931276444804 RMSE: 0.1017489665209171 NRMSE: 0.03686823919157805 MAPE: 354.8365555985971 Pearson Correlation: -0.0028668210392234993 Spearman Correlation: -0.019759047897766075 Coefficient of Determination: -98853.4351004674 RMSE: 121.7024258966367 NRMSE: 64.11566187255973 MAPE: 59206.28311287275 Predictor: RandomForests Pearson Correlation: 0.5422449069528146 Spearman Correlation: 0.5297606429711265 Coefficient of Determination: 0.15869453589163784 RMSE: 0.33762970571198425 NRMSE: 0.122338468625257 MAPE: 420.6099173240049 Pearson Correlation: 0.13627086446070433 Spearman Correlation: 0.2893083601599844 Coefficient of Determination: 0.017416001328948605 RMSE: 0.3836948759603035 NRMSE: 0.2021393636820219 MAPE: 117.76280249858235 Protein: CDH3 x_train_column_count: 75 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.574552531910747 Spearman Correlation: 0.5773864361315183 Coefficient of Determination: 0.33011061192505 RMSE: 0.17000123196587455 NRMSE: 0.12794264595958135 MAPE: 264.0142582193623 Pearson Correlation: 0.0007753015766821367 Spearman Correlation: 0.3547702663154815 Coefficient of Determination: -2278.493711007902 RMSE: 9.449859015708547 NRMSE: 7.775741805075741 MAPE: 2650.859635950661 Predictor: ElasticNet Pearson Correlation: 0.5745426888510519 Spearman Correlation: 0.5775625766812931 Coefficient of Determination: 0.3300992990113333 RMSE: 0.17000266742759676 NRMSE: 0.12794372628569892 MAPE: 263.95053276993565 Pearson Correlation: 0.0008959886522141604 Spearman Correlation: 0.3550434103989855 Coefficient of Determination: -2125.0272408347555 RMSE: 9.126211776418986 NRMSE: 7.509431232139379 MAPE: 2609.6090938745015 Predictor: RandomForests Pearson Correlation: 0.5724261663841643 Spearman Correlation: 0.574509680465312 Coefficient of Determination: 0.2907985319378138 RMSE: 0.17491833411952845 NRMSE: 0.131643248906496 MAPE: 256.0238755360594 Pearson Correlation: 0.23351341378213553 Spearman Correlation: 0.32698761096478396 Coefficient of Determination: -0.10647889227884555 RMSE: 0.20819854822055792 NRMSE: 0.17131452992722615 MAPE: 1171.915795100246 Protein: PTEN x_train_column_count: 886 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 4.421706997077756e-15 NRMSE: 6.913778433394974e-16 MAPE: 3.4132745642405882e-12 Pearson Correlation: 0.07212908989421532 Spearman Correlation: 0.06337430494585895 Coefficient of Determination: -8.086037652518183 RMSE: 1.5422096220130461 NRMSE: 0.5172422934038926 MAPE: 4085.106661385548 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.05467900724895689, tolerance: 0.020892714789331884 positive)
Pearson Correlation: 0.999999842136245 Spearman Correlation: 0.9999981401790449 Coefficient of Determination: 0.9999996511233141 RMSE: 0.00036842260503562694 NRMSE: 5.7606536632886704e-05 MAPE: 0.5118328261756883 Pearson Correlation: 0.1252215294016436 Spearman Correlation: -0.0050726758365037565 Coefficient of Determination: -7587.570593036203 RMSE: 44.56933267664794 NRMSE: 14.948126065417206 MAPE: 4980.213804464324 Predictor: RandomForests Pearson Correlation: 0.5988459316803008 Spearman Correlation: 0.5367131270411893 Coefficient of Determination: 0.30540844429731273 RMSE: 0.5198464045535693 NRMSE: 0.08128315292839798 MAPE: 229.08984107108168 Pearson Correlation: 0.31277528435883606 Spearman Correlation: 0.34763670603509206 Coefficient of Determination: 0.08734647326220768 RMSE: 0.4887751419253951 NRMSE: 0.16393048763261173 MAPE: 534.0083990484341 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.8420670919857615 Spearman Correlation: 0.8168885626969351 Coefficient of Determination: 0.7090769874053571 RMSE: 0.10535266521092905 NRMSE: 0.06787093909546082 MAPE: 293.76772518983626 Pearson Correlation: -0.08405658283408048 Spearman Correlation: 0.03594771241830066 Coefficient of Determination: -5022.808390577072 RMSE: 13.692921818741084 NRMSE: 9.268695429417317 MAPE: 1357.0560462145409 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 2.963631321772869, tolerance: 0.0020487419647026942 positive)
Pearson Correlation: 0.8416947001096619 Spearman Correlation: 0.8163462698614388 Coefficient of Determination: 0.708449842674217 RMSE: 0.10546615881016716 NRMSE: 0.06794405463692521 MAPE: 283.68950431741894 Pearson Correlation: -0.08366751586349627 Spearman Correlation: 0.035108769876109655 Coefficient of Determination: -5137.424506443348 RMSE: 13.848240115098767 NRMSE: 9.373829892507947 MAPE: 1353.4230456511798 Predictor: RandomForests Pearson Correlation: 0.528142720415565 Spearman Correlation: 0.46647966940440216 Coefficient of Determination: 0.1822001667948686 RMSE: 0.17663631570641272 NRMSE: 0.11379372891377854 MAPE: 167.7987156201221 Pearson Correlation: 0.23751949277788936 Spearman Correlation: 0.2441566676421813 Coefficient of Determination: 0.04032199470411235 RMSE: 0.18925282271355992 NRMSE: 0.12810463654942356 MAPE: 169.63370569086388 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 9.495928721101258e-15 NRMSE: 2.1467002873519287e-15 MAPE: 7.19882467923556e-12 Pearson Correlation: 0.08869987446362307 Spearman Correlation: 0.09497122231977369 Coefficient of Determination: -91.98583061722597 RMSE: 6.493851271263072 NRMSE: 1.7543363062629869 MAPE: 3070.977672226107 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.18066769651596012, tolerance: 0.023629428078437084 positive)
Pearson Correlation: 0.9995900826831629 Spearman Correlation: 0.9992946629028022 Coefficient of Determination: 0.9991780061754961 RMSE: 0.019018389589791598 NRMSE: 0.0042993985734806365 MAPE: 17.779755167869297 Pearson Correlation: 0.13438011753499915 Spearman Correlation: 0.05737976782752904 Coefficient of Determination: -92731.1264349512 RMSE: 205.07327148106938 NRMSE: 55.40125121057634 MAPE: 4016.6494501258085 Predictor: RandomForests Pearson Correlation: 0.6588164693828077 Spearman Correlation: 0.6042075504391192 Coefficient of Determination: 0.41835904172624727 RMSE: 0.5059026483330265 NRMSE: 0.11436705060088762 MAPE: 176.00097453025793 Pearson Correlation: 0.6910390941113381 Spearman Correlation: 0.547844112769486 Coefficient of Determination: 0.43744825453987046 RMSE: 0.5050974646788615 NRMSE: 0.13645382123375338 MAPE: 127.04011635235368 Protein: TP53 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.7724541643423523e-15 NRMSE: 7.425884998908135e-16 MAPE: 3.3072936302344763e-12 Pearson Correlation: 0.20754787323470436 Spearman Correlation: 0.20132182226124282 Coefficient of Determination: -2.4820547753990514 RMSE: 0.7639204188335845 NRMSE: 0.25157925863118213 MAPE: 2965.2535092109565 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.03638971928312777, tolerance: 0.011132998655991638 positive)
Pearson Correlation: 0.9999998201839372 Spearman Correlation: 0.9999964934625065 Coefficient of Determination: 0.9999996016233614 RMSE: 0.00028738617149873924 NRMSE: 7.697500241026898e-05 MAPE: 0.48790250450704137 Pearson Correlation: 0.1816262418416041 Spearman Correlation: 0.2764315676519364 Coefficient of Determination: -78.98608848106274 RMSE: 3.661318826407402 NRMSE: 1.2057694142622764 MAPE: 3563.799578866972 Predictor: RandomForests Pearson Correlation: 0.6817242960852894 Spearman Correlation: 0.5995204023693445 Coefficient of Determination: 0.3943448703845094 RMSE: 0.3543493458721129 NRMSE: 0.09491076627082173 MAPE: 300.43384517655204 Pearson Correlation: 0.5868677106276413 Spearman Correlation: 0.4781246684774168 Coefficient of Determination: 0.30902329369383663 RMSE: 0.3403000576238626 NRMSE: 0.11206983620084393 MAPE: 1902.4641587392275 Protein: CTNNB1 x_train_column_count: 993 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 5.068579139604901e-15 NRMSE: 9.96966785917565e-16 MAPE: 5.7093483310052924e-12 Pearson Correlation: 0.27956251353641537 Spearman Correlation: 0.3520827236367184 Coefficient of Determination: -2.350672078128874 RMSE: 1.4031286705527954 NRMSE: 0.34920202845942 MAPE: 601.8537465683693 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.06147083946609214, tolerance: 0.028224784501103505 positive)
Pearson Correlation: 0.9999998898011065 Spearman Correlation: 0.9999988569849734 Coefficient of Determination: 0.9999997546797122 RMSE: 0.000359083051538842 NRMSE: 7.063002587310031e-05 MAPE: 0.25255732268105097 Pearson Correlation: 0.07086572047337063 Spearman Correlation: 0.37746561311091603 Coefficient of Determination: -9979.852020971579 RMSE: 76.57999679176098 NRMSE: 19.05875831655782 MAPE: 1380.7720781657624 Predictor: RandomForests Pearson Correlation: 0.6720707414567955 Spearman Correlation: 0.656945446546816 Coefficient of Determination: 0.4404609223310487 RMSE: 0.5423047218182556 NRMSE: 0.10666890673057743 MAPE: 401.5772421542724 Pearson Correlation: 0.5684810833697357 Spearman Correlation: 0.5563359672227101 Coefficient of Determination: 0.2805136576753322 RMSE: 0.6501937831490174 NRMSE: 0.16181622735845735 MAPE: 207.1491275269099 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.9580496656029474 Spearman Correlation: 0.8747058165184691 Coefficient of Determination: 0.9178591617619193 RMSE: 0.1469687306075004 NRMSE: 0.03546799493387562 MAPE: 35.016069227604795 Pearson Correlation: -0.048646920556689045 Spearman Correlation: 0.32684616135011224 Coefficient of Determination: -161.69499272776983 RMSE: 5.335157715028012 NRMSE: 2.899557994895631 MAPE: 136.28656914444935 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 5.808045007246208, tolerance: 0.014120986618491432 positive)
Pearson Correlation: 0.9580058374235852 Spearman Correlation: 0.8750272168334879 Coefficient of Determination: 0.9177751839946242 RMSE: 0.14704383912359412 NRMSE: 0.03548612088799723 MAPE: 34.97137641575608 Pearson Correlation: -0.0460738343426772 Spearman Correlation: 0.33302604623939136 Coefficient of Determination: -146.16049956343855 RMSE: 5.074062304582361 NRMSE: 2.7576575441075013 MAPE: 133.0657069848839 Predictor: RandomForests Pearson Correlation: 0.8632117970033647 Spearman Correlation: 0.7117208799642074 Coefficient of Determination: 0.7398394408831499 RMSE: 0.2615568548933126 NRMSE: 0.06312157127526428 MAPE: 68.00755178580101 Pearson Correlation: 0.8413337406783356 Spearman Correlation: 0.7374689829172879 Coefficient of Determination: 0.7046858123674995 RMSE: 0.22730151215431948 NRMSE: 0.1235341018996405 MAPE: 40.080365157348105 Protein: CCND1 x_train_column_count: 858 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.6090690422131454e-15 NRMSE: 9.673257759394172e-16 MAPE: 4.849426001135574e-12 Pearson Correlation: 0.17934777543130886 Spearman Correlation: 0.19544922446590576 Coefficient of Determination: -3.056613816169704 RMSE: 0.4741796752620412 NRMSE: 0.3668531250093158 MAPE: 1156.9326955540566 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.01840893619176583, tolerance: 0.003060830225233494 positive)
Pearson Correlation: 0.9999989238199593 Spearman Correlation: 0.9999926963279832 Coefficient of Determination: 0.9999976667793261 RMSE: 0.0003646786897507814 NRMSE: 0.0002192342822322573 MAPE: 1.9208743741899583 Pearson Correlation: -0.04354648315924904 Spearman Correlation: 0.13825968198224567 Coefficient of Determination: -30192.463531635665 RMSE: 40.908878094648074 NRMSE: 31.64950028984966 MAPE: 8777.424765315714 Predictor: RandomForests Pearson Correlation: 0.5855948479517242 Spearman Correlation: 0.5874827344196355 Coefficient of Determination: 0.3062804552181345 RMSE: 0.19884947239638187 NRMSE: 0.11954255232976752 MAPE: 487.48886852094284 Pearson Correlation: 0.25070625911763195 Spearman Correlation: 0.3758755243390889 Coefficient of Determination: 0.04354463624943139 RMSE: 0.23024672187680936 NRMSE: 0.17813232799777912 MAPE: 307.11356143767125 Protein: ERBB2 x_train_column_count: 664 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 8.133883409478007e-15 NRMSE: 1.4596994794749037e-15 MAPE: 8.568644253040425e-12 Pearson Correlation: 0.36132526224337524 Spearman Correlation: 0.24968295776021854 Coefficient of Determination: -3.6000993595962667 RMSE: 2.267469309839146 NRMSE: 0.38630071551172057 MAPE: 4190.079525970558 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.07372581272136325, tolerance: 0.0518906404354321 positive)
Pearson Correlation: 0.9999929623473028 Spearman Correlation: 0.9999576309514072 Coefficient of Determination: 0.9999858497811239 RMSE: 0.003697761967916094 NRMSE: 0.000663597072647936 MAPE: 2.6820234089374564 Pearson Correlation: -0.008722286516599655 Spearman Correlation: 0.17514876597405135 Coefficient of Determination: -3901.6999750102777 RMSE: 66.04506839545334 NRMSE: 11.251864387524634 MAPE: 43083.21449948333 Predictor: RandomForests Pearson Correlation: 0.8568503474696717 Spearman Correlation: 0.713721500763862 Coefficient of Determination: 0.7285098826917975 RMSE: 0.5121938802166079 NRMSE: 0.09191785801493242 MAPE: 261.2963891209982 Pearson Correlation: 0.7947976722587995 Spearman Correlation: 0.5356024452900536 Coefficient of Determination: 0.6110180150145317 RMSE: 0.6593599368040762 NRMSE: 0.11233281714637482 MAPE: 1401.5275351861853 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 0.7481018227024001 Spearman Correlation: 0.7329996490943484 Coefficient of Determination: 0.5596563371306531 RMSE: 0.2953831547499844 NRMSE: 0.07971543549130998 MAPE: 162.23652558313864 Pearson Correlation: -0.020251217626284027 Spearman Correlation: 0.27692420251682764 Coefficient of Determination: -11150.004935259301 RMSE: 54.67622089155489 NRMSE: 20.17878014443325 MAPE: 8608.097977805372 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 22.183506343782973, tolerance: 0.01064030272396596 positive)
Pearson Correlation: 0.747932126609234 Spearman Correlation: 0.7328264144847237 Coefficient of Determination: 0.5594024596702905 RMSE: 0.29546829316082107 NRMSE: 0.0797384119047843 MAPE: 161.9817778293281 Pearson Correlation: -0.020118832951243594 Spearman Correlation: 0.2820797970929666 Coefficient of Determination: -11145.63815271128 RMSE: 54.665514119029446 NRMSE: 20.174828708044185 MAPE: 8607.007559290925 Predictor: RandomForests Pearson Correlation: 0.5753934211321562 Spearman Correlation: 0.5844911973328893 Coefficient of Determination: 0.30267840944718905 RMSE: 0.37171184899868526 NRMSE: 0.10031435931168928 MAPE: 211.10106471668487 Pearson Correlation: 0.4181273446652575 Spearman Correlation: 0.3811218187518914 Coefficient of Determination: 0.16766145957464407 RMSE: 0.4723799845948904 NRMSE: 0.1743363330226678 MAPE: 364.32876405743633 Fold: 3 Protein: RB1 x_train_column_count: 371 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.804866861559758 Spearman Correlation: 0.7423441693876665 Coefficient of Determination: 0.647810664837055 RMSE: 0.14277418451629123 NRMSE: 0.05221408152292687 MAPE: 688.1137867794212 Pearson Correlation: 0.07332579499111153 Spearman Correlation: 0.06647713811892916 Coefficient of Determination: -3.654639943959748 RMSE: 0.4782338482582366 NRMSE: 0.33556973227769665 MAPE: 1619.799783958977 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 5.531781248034409, tolerance: 0.003113905664439024 positive)
Pearson Correlation: 0.8028974139065456 Spearman Correlation: 0.7444052489638251 Coefficient of Determination: 0.6446438726489263 RMSE: 0.1434146416500814 NRMSE: 0.052448303704681606 MAPE: 705.9022261113861 Pearson Correlation: 0.09472171790739568 Spearman Correlation: 0.06768413571241537 Coefficient of Determination: -3.0617305641188075 RMSE: 0.4467379229143643 NRMSE: 0.313469499778523 MAPE: 1604.566015130138 Predictor: RandomForests Pearson Correlation: 0.5879611829458442 Spearman Correlation: 0.47134775759041164 Coefficient of Determination: 0.18574695044660916 RMSE: 0.21709073288955738 NRMSE: 0.07939245644000782 MAPE: 198.11714693116363 Pearson Correlation: 0.04831332966047765 Spearman Correlation: 0.0436140101497525 Coefficient of Determination: -0.0383183192042289 RMSE: 0.2258720655214266 NRMSE: 0.15849114158709082 MAPE: 252.72555129961606 Protein: CDH1 x_train_column_count: 835 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 8.74162293185732e-15 NRMSE: 1.3919338447592941e-15 MAPE: 8.888252349555997e-12 Pearson Correlation: 0.2445520037517913 Spearman Correlation: 0.25284853925859424 Coefficient of Determination: -4.260228608003736 RMSE: 2.1594394317591785 NRMSE: 0.4245349411707582 MAPE: 1336.0218672418048 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.09270871012536445, tolerance: 0.07424076431120771 positive)
Pearson Correlation: 0.9999999672882833 Spearman Correlation: 0.9999986899591415 Coefficient of Determination: 0.9999999278861582 RMSE: 0.00031545643831538825 NRMSE: 5.0230317237570176e-05 MAPE: 0.31116267654141044 Pearson Correlation: 0.20241301068485884 Spearman Correlation: 0.20867342485567153 Coefficient of Determination: -7.627919610101223 RMSE: 2.7656152604350464 NRMSE: 0.5437060630745579 MAPE: 1230.5503653966748 Predictor: RandomForests Pearson Correlation: 0.7643260877257265 Spearman Correlation: 0.7129625872898693 Coefficient of Determination: 0.580356810568925 RMSE: 0.7609746138015918 NRMSE: 0.12117044262946908 MAPE: 277.85307939593406 Pearson Correlation: 0.7626579492998052 Spearman Correlation: 0.5416752910966068 Coefficient of Determination: 0.566316061785705 RMSE: 0.620048108501882 NRMSE: 0.121898342409838 MAPE: 158.67672382108 Protein: CDH2 x_train_column_count: 474 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.9282693858849654 Spearman Correlation: 0.9024679937740698 Coefficient of Determination: 0.8616840527712512 RMSE: 0.14178564796772947 NRMSE: 0.0513753344328319 MAPE: 439.86312840184877 Pearson Correlation: 0.036490618560688096 Spearman Correlation: 0.060028179902492554 Coefficient of Determination: -14.557845813205077 RMSE: 1.3094370026983182 NRMSE: 0.6899472056707054 MAPE: 56879.70204664299 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 5.684129985154452, tolerance: 0.007819420435861616 positive)
Pearson Correlation: 0.9246765226310353 Spearman Correlation: 0.8951501052579346 Coefficient of Determination: 0.8550101365211928 RMSE: 0.14516601837187548 NRMSE: 0.0526001950764097 MAPE: 453.488096207604 Pearson Correlation: 0.03443574236805108 Spearman Correlation: 0.06007306824274617 Coefficient of Determination: -10.927355464103137 RMSE: 1.1465208552281576 NRMSE: 0.6041060842772766 MAPE: 30180.92368229635 Predictor: RandomForests Pearson Correlation: 0.5594625049279448 Spearman Correlation: 0.4946994203608411 Coefficient of Determination: 0.18187002000370278 RMSE: 0.34483179145926435 NRMSE: 0.12494810908734849 MAPE: 181.0708320357097 Pearson Correlation: -0.09874876959249552 Spearman Correlation: -0.0439182533448048 Coefficient of Determination: -0.05837903642723852 RMSE: 0.3415312850927408 NRMSE: 0.17995409883277172 MAPE: 1788.9477835023015 Protein: CDH3 x_train_column_count: 75 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.5856110152021285 Spearman Correlation: 0.5949739743044733 Coefficient of Determination: 0.3429402611260678 RMSE: 0.17225952163900818 NRMSE: 0.12085334346341148 MAPE: 585.4674957402206 Pearson Correlation: 0.10616887465530847 Spearman Correlation: 0.19985535979251615 Coefficient of Determination: -0.48047171764362084 RMSE: 0.22914773915605774 NRMSE: 0.19931609866836375 MAPE: 487.88709879007183 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 7.973137963627039, tolerance: 0.0024296509859561446 positive)
Pearson Correlation: 0.5824855701750795 Spearman Correlation: 0.5919128711861097 Coefficient of Determination: 0.33928943281501356 RMSE: 0.17273742246202012 NRMSE: 0.12118862775861546 MAPE: 589.5166723683901 Pearson Correlation: 0.13863534206748235 Spearman Correlation: 0.20478310203369124 Coefficient of Determination: -0.22084234169586003 RMSE: 0.20808717331502052 NRMSE: 0.18099730645752304 MAPE: 288.0876933460816 Predictor: RandomForests Pearson Correlation: 0.5836203688449265 Spearman Correlation: 0.5841705297138651 Coefficient of Determination: 0.27520118451391695 RMSE: 0.1809212359517805 NRMSE: 0.12693020426543505 MAPE: 469.5270837729854 Pearson Correlation: 0.3483283736258241 Spearman Correlation: 0.3610892903901545 Coefficient of Determination: 0.11775038658097825 RMSE: 0.17689324850250002 NRMSE: 0.1538643684731271 MAPE: 177.090752788679 Protein: PTEN x_train_column_count: 886 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.5394032000890945e-15 NRMSE: 7.097808146492212e-16 MAPE: 6.3763979248482356e-12 Pearson Correlation: 0.10364084017162231 Spearman Correlation: 0.180398758089253 Coefficient of Determination: -9.93296664261746 RMSE: 1.557225728697576 NRMSE: 0.37231045968956533 MAPE: 684.6897411968645 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.05131964743416992, tolerance: 0.02130541006350738 positive)
Pearson Correlation: 0.9999999122080941 Spearman Correlation: 0.9999984587754607 Coefficient of Determination: 0.9999997954628185 RMSE: 0.0002846033085435861 NRMSE: 4.450055641366368e-05 MAPE: 0.2626050834973852 Pearson Correlation: 0.13899348235423123 Spearman Correlation: 0.20054863526976646 Coefficient of Determination: -9.952517483609778 RMSE: 1.558617458634063 NRMSE: 0.3726432024659454 MAPE: 619.7098604657175 Predictor: RandomForests Pearson Correlation: 0.6158077209960537 Spearman Correlation: 0.5301391776385271 Coefficient of Determination: 0.2960362712395399 RMSE: 0.5279939575080432 NRMSE: 0.08255710382425818 MAPE: 290.4490842110867 Pearson Correlation: 0.40257742618260034 Spearman Correlation: 0.41507001334181237 Coefficient of Determination: 0.14828879015916907 RMSE: 0.43463904791393354 NRMSE: 0.10391599672785673 MAPE: 105.98564152597636 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.8666037577995866 Spearman Correlation: 0.8533588370042484 Coefficient of Determination: 0.751002073032364 RMSE: 0.09483443907573573 NRMSE: 0.06391666829033492 MAPE: 211.92944084913225 Pearson Correlation: 0.09146193561568379 Spearman Correlation: 0.060117956582999794 Coefficient of Determination: -4.940770292772315 RMSE: 0.5219173997348382 NRMSE: 0.3589799776701389 MAPE: 994.1217516466759 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 2.478595430539699, tolerance: 0.0019432053784754488 positive)
Pearson Correlation: 0.862932701837153 Spearman Correlation: 0.8475677626366166 Coefficient of Determination: 0.7446511255988052 RMSE: 0.09603624878332528 NRMSE: 0.0647266659365145 MAPE: 213.6736316128145 Pearson Correlation: 0.09812567544460085 Spearman Correlation: 0.08305091085923766 Coefficient of Determination: -4.100318847518048 RMSE: 0.4835919457435782 NRMSE: 0.3326193492929852 MAPE: 976.1032118234606 Predictor: RandomForests Pearson Correlation: 0.5753954169497891 Spearman Correlation: 0.509108752968977 Coefficient of Determination: 0.2075190383281813 RMSE: 0.16918530277178062 NRMSE: 0.11402778339024926 MAPE: 143.482131210702 Pearson Correlation: 0.11790324392992879 Spearman Correlation: 0.15196947592862758 Coefficient of Determination: 0.011623346935991874 RMSE: 0.2128833200281104 NRMSE: 0.14642326450289253 MAPE: 187.72936977635632 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 9.976646591510951e-15 NRMSE: 2.329250698428967e-15 MAPE: 1.2056513210335614e-11 Pearson Correlation: 0.1139524970296359 Spearman Correlation: 0.10993902667115552 Coefficient of Determination: -19.6431122876549 RMSE: 2.98297477642846 NRMSE: 0.9209270403595011 MAPE: 1692.0328898156097 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.4524982219992237, tolerance: 0.02397725168374273 positive)
Pearson Correlation: 0.9984418217825495 Spearman Correlation: 0.9976579358799335 Coefficient of Determination: 0.9968612452665969 RMSE: 0.03740134786160944 NRMSE: 0.008732104002056743 MAPE: 72.8660415578542 Pearson Correlation: 0.22665842738614558 Spearman Correlation: 0.1846930759735159 Coefficient of Determination: -15.288940467251958 RMSE: 2.6497714204098286 NRMSE: 0.8180579236237931 MAPE: 1181.291097757725 Predictor: RandomForests Pearson Correlation: 0.6711858623791881 Spearman Correlation: 0.600770509113065 Coefficient of Determination: 0.440869251607526 RMSE: 0.49918928099353604 NRMSE: 0.11654587247701159 MAPE: 185.34485015692627 Pearson Correlation: 0.6107592091122445 Spearman Correlation: 0.5965500730702801 Coefficient of Determination: 0.3657442136872102 RMSE: 0.5228705874882477 NRMSE: 0.16142465113403343 MAPE: 106.97931445417623 Protein: TP53 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.193075148895659e-15 NRMSE: 7.673816748127035e-16 MAPE: 7.2699277955965556e-12 Pearson Correlation: 0.1366241690513068 Spearman Correlation: 0.12784947443234954 Coefficient of Determination: -2.228955741718939 RMSE: 0.7734853292963992 NRMSE: 0.2884320444556974 MAPE: 1049.9027350764397 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.033051166514434634, tolerance: 0.010899962745861313 positive)
Pearson Correlation: 0.9999998478105327 Spearman Correlation: 0.9999971487346024 Coefficient of Determination: 0.9999996605510492 RMSE: 0.0002622458379529172 NRMSE: 6.302471472072032e-05 MAPE: 0.5006877669609924 Pearson Correlation: 0.15820207994059646 Spearman Correlation: 0.19550119078791509 Coefficient of Determination: -3.481515368067301 RMSE: 0.9112414778339766 NRMSE: 0.3398011991818505 MAPE: 967.1647059879809 Predictor: RandomForests Pearson Correlation: 0.6771238092658958 Spearman Correlation: 0.5832017628210413 Coefficient of Determination: 0.3957126358987394 RMSE: 0.34989934177888216 NRMSE: 0.08409020470533098 MAPE: 505.2938142491085 Pearson Correlation: 0.4980266397715637 Spearman Correlation: 0.38444705188482126 Coefficient of Determination: 0.23158902742845922 RMSE: 0.3773269399586351 NRMSE: 0.14070490621907644 MAPE: 410.3498211979149 Protein: CTNNB1 x_train_column_count: 993 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.9999999999999994 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 5.725617144140987e-15 NRMSE: 1.1262032148192343e-15 MAPE: 4.359965505072856e-12 Pearson Correlation: 0.19962184091941826 Spearman Correlation: 0.24082843925734737 Coefficient of Determination: -3.2538814438161507 RMSE: 1.2642477046050329 NRMSE: 0.41330141704698836 MAPE: 6455.519185660185 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.059342198663786885, tolerance: 0.03183156097646061 positive)
Pearson Correlation: 0.9999999330222423 Spearman Correlation: 0.9999989596733967 Coefficient of Determination: 0.9999998522562981 RMSE: 0.00029565982718738937 NRMSE: 5.815496207462419e-05 MAPE: 0.15556323104290057 Pearson Correlation: 0.2032167850504172 Spearman Correlation: 0.21967106821780824 Coefficient of Determination: -6.688516203484651 RMSE: 1.6996548967941196 NRMSE: 0.5556425175043707 MAPE: 1884.713813591997 Predictor: RandomForests Pearson Correlation: 0.6782013241025107 Spearman Correlation: 0.6977513301924209 Coefficient of Determination: 0.45232460759519433 RMSE: 0.569245288017496 NRMSE: 0.11196799528274902 MAPE: 242.34888899692731 Pearson Correlation: 0.4951813640650429 Spearman Correlation: 0.4453696430130052 Coefficient of Determination: 0.23694941391714797 RMSE: 0.535446578746181 NRMSE: 0.17504546691496317 MAPE: 846.9646780919732 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.959014613773111 Spearman Correlation: 0.8753961741835754 Coefficient of Determination: 0.9197090294303895 RMSE: 0.14803200675274011 NRMSE: 0.0357245955915583 MAPE: 29.86322047601101 Pearson Correlation: 0.3070127132122012 Spearman Correlation: 0.35626628760957124 Coefficient of Determination: -2.101147859479455 RMSE: 0.6425716643821627 NRMSE: 0.2799022800810919 MAPE: 153.1708317721028 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 5.9856835477482715, tolerance: 0.014683406463848499 positive)
Pearson Correlation: 0.958362254911638 Spearman Correlation: 0.872780099600482 Coefficient of Determination: 0.9184582115889417 RMSE: 0.14918061350802295 NRMSE: 0.0360017891034638 MAPE: 30.449262354825823 Pearson Correlation: 0.29053836500619923 Spearman Correlation: 0.33322859387274156 Coefficient of Determination: -2.0455821711338698 RMSE: 0.636788914591102 NRMSE: 0.27738333170322865 MAPE: 157.10425436711668 Predictor: RandomForests Pearson Correlation: 0.8657059774197732 Spearman Correlation: 0.7277104762182307 Coefficient of Determination: 0.7454502600546815 RMSE: 0.2635776620978198 NRMSE: 0.06360925310660033 MAPE: 55.22194693514736 Pearson Correlation: 0.7854138098363409 Spearman Correlation: 0.6684071147859494 Coefficient of Determination: 0.564748026139885 RMSE: 0.2407302730289669 NRMSE: 0.10486138129065944 MAPE: 80.58663691037302 Protein: CCND1 x_train_column_count: 858 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.7151610232800163e-15 NRMSE: 1.0311052069110725e-15 MAPE: 3.503455969188882e-12 Pearson Correlation: 0.17090769466492614 Spearman Correlation: 0.23301786805321764 Coefficient of Determination: -5.692455984338252 RMSE: 0.5425917395627227 NRMSE: 0.5141441440712599 MAPE: 979.5123199653167 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.018607459190808796, tolerance: 0.0032202923923696524 positive)
Pearson Correlation: 0.9999993203096817 Spearman Correlation: 0.9999933534690472 Coefficient of Determination: 0.9999984542359042 RMSE: 0.00030417822617441936 NRMSE: 0.00018286315312694292 MAPE: 1.3045801687280392 Pearson Correlation: 0.17702776432547002 Spearman Correlation: 0.26501327946732506 Coefficient of Determination: -7.241869186425745 RMSE: 0.602134171754365 NRMSE: 0.570564820249936 MAPE: 662.8522855275827 Predictor: RandomForests Pearson Correlation: 0.5819476710866504 Spearman Correlation: 0.5574850467020906 Coefficient of Determination: 0.28632338998346474 RMSE: 0.20668418511430553 NRMSE: 0.12425255504581256 MAPE: 478.9060831623546 Pearson Correlation: 0.37818228037276846 Spearman Correlation: 0.3745308544994327 Coefficient of Determination: 0.13292613620409144 RMSE: 0.19530279731877295 NRMSE: 0.18506324781705527 MAPE: 322.6152701021065 Protein: ERBB2 x_train_column_count: 664 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 7.343736684552711e-15 NRMSE: 1.251126409280323e-15 MAPE: 6.634049973899533e-12 Pearson Correlation: 0.47794608469807576 Spearman Correlation: 0.29643798106979624 Coefficient of Determination: -2.535625383616274 RMSE: 2.0054449028125467 NRMSE: 0.3617585869854511 MAPE: 707.7793896277677 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.07325515251757733, tolerance: 0.05179983228777935 positive)
Pearson Correlation: 0.9999797082403487 Spearman Correlation: 0.9999106475039028 Coefficient of Determination: 0.9999591878418164 RMSE: 0.006268560469293242 NRMSE: 0.0010679524454901004 MAPE: 6.7887893139698505 Pearson Correlation: 0.2729262374718609 Spearman Correlation: 0.2702655522708771 Coefficient of Determination: -7.617926990219331 RMSE: 3.130970807774419 NRMSE: 0.5647901738535283 MAPE: 803.1748287151876 Predictor: RandomForests Pearson Correlation: 0.8467736165306973 Spearman Correlation: 0.6882019830791625 Coefficient of Determination: 0.7095405763624913 RMSE: 0.5288296229313746 NRMSE: 0.09009482987739997 MAPE: 480.3626820728608 Pearson Correlation: 0.8455799891233879 Spearman Correlation: 0.7131274501414934 Coefficient of Determination: 0.7116131472060716 RMSE: 0.5727503218799478 NRMSE: 0.10331739697668443 MAPE: 182.29027605188458 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 0.7716095797997321 Spearman Correlation: 0.7444483351806245 Coefficient of Determination: 0.595381343638719 RMSE: 0.28688227626803386 NRMSE: 0.10402313244207807 MAPE: 201.45443073292282 Pearson Correlation: 0.1487432297595444 Spearman Correlation: 0.17037369543261138 Coefficient of Determination: -1.386852590166662 RMSE: 0.7643175044333398 NRMSE: 0.21250226021640084 MAPE: 395.074559581594 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 22.225566869881785, tolerance: 0.010943186691674512 positive)
Pearson Correlation: 0.7693338332432857 Spearman Correlation: 0.7396454165942019 Coefficient of Determination: 0.5918742122589519 RMSE: 0.2881229049287026 NRMSE: 0.10447298274708473 MAPE: 201.2549253014849 Pearson Correlation: 0.1801862670419489 Spearman Correlation: 0.1815558797491241 Coefficient of Determination: -1.0718291648440053 RMSE: 0.71209506821007 NRMSE: 0.1979829201946396 MAPE: 244.38745580331815 Predictor: RandomForests Pearson Correlation: 0.5656651272598293 Spearman Correlation: 0.5988143318577327 Coefficient of Determination: 0.3035627878554765 RMSE: 0.37637585105203797 NRMSE: 0.1364733838259374 MAPE: 234.6617166512164 Pearson Correlation: 0.36406567992073785 Spearman Correlation: 0.3483410017581267 Coefficient of Determination: 0.10633488350509712 RMSE: 0.4676795819343259 NRMSE: 0.13002838171525014 MAPE: 158.6984783909037 Fold: 4 Protein: RB1 x_train_column_count: 371 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.8514085783899157 Spearman Correlation: 0.7987684768258972 Coefficient of Determination: 0.7248965673559373 RMSE: 0.13191819784462025 NRMSE: 0.048243928410115655 MAPE: 334.64664390275954 Pearson Correlation: -0.04237432850979901 Spearman Correlation: 0.023937954338582777 Coefficient of Determination: -21.452010738618558 RMSE: 0.7812711493096078 NRMSE: 0.748544771882888 MAPE: 791.7893473245575 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 4.742115510709101, tolerance: 0.0034032643600116126 positive)
Pearson Correlation: 0.8494708763098403 Spearman Correlation: 0.7977287667518103 Coefficient of Determination: 0.7216007288563131 RMSE: 0.13270605898660714 NRMSE: 0.04853205785057312 MAPE: 339.5909411368504 Pearson Correlation: 0.008323316914093427 Spearman Correlation: 0.049928303345428256 Coefficient of Determination: -30.485946145706148 RMSE: 0.9251934309575796 NRMSE: 0.8864383464507527 MAPE: 923.5231060471035 Predictor: RandomForests Pearson Correlation: 0.5943565970282852 Spearman Correlation: 0.4306441443928575 Coefficient of Determination: 0.1854250730926652 RMSE: 0.22699810102307405 NRMSE: 0.08301568937356424 MAPE: 191.74597797116002 Pearson Correlation: 0.09426634987547124 Spearman Correlation: 0.11929575181735434 Coefficient of Determination: -0.08117729739402368 RMSE: 0.17144413205356804 NRMSE: 0.16426257238873265 MAPE: 109.3944588436172 Protein: CDH1 x_train_column_count: 835 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 9.119641036671206e-15 NRMSE: 1.4521258935497602e-15 MAPE: 7.967849837783787e-12 Pearson Correlation: 0.06339776809485285 Spearman Correlation: 0.11476202945173881 Coefficient of Determination: -6.7131499685121065 RMSE: 3.2395220765651658 NRMSE: 0.5877003876066118 MAPE: 1144.4411861277233 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.08865455477658321, tolerance: 0.06736762282826622 positive)
Pearson Correlation: 0.9999999642032867 Spearman Correlation: 0.9999990752652764 Coefficient of Determination: 0.9999999199274806 RMSE: 0.00031664761433456296 NRMSE: 5.041998890713081e-05 MAPE: 0.2442672387579503 Pearson Correlation: 0.07650859023621057 Spearman Correlation: 0.13907155949575434 Coefficient of Determination: -8.447469633003793 RMSE: 3.58527777093198 NRMSE: 0.6504259226682595 MAPE: 1291.457902073954 Predictor: RandomForests Pearson Correlation: 0.7565631209267103 Spearman Correlation: 0.7201013155185761 Coefficient of Determination: 0.5683364031153834 RMSE: 0.7352028572653573 NRMSE: 0.11706679043109411 MAPE: 287.82632375135336 Pearson Correlation: 0.7856144570338331 Spearman Correlation: 0.563132412041002 Coefficient of Determination: 0.5551106974267459 RMSE: 0.7780204953572248 NRMSE: 0.14114518619738486 MAPE: 152.7248565808833 Protein: CDH2 x_train_column_count: 474 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 0.9524673240316106 Spearman Correlation: 0.9338469182046863 Coefficient of Determination: 0.9071940033479369 RMSE: 0.11556959816652228 NRMSE: 0.04187607731231331 MAPE: 311.96068003507645 Pearson Correlation: 0.02447094859146637 Spearman Correlation: -0.05276624396812928 Coefficient of Determination: -252.37514506590884 RMSE: 5.304865277125477 NRMSE: 2.7366107863508917 MAPE: 3323.491992568749 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 4.082113930826392, tolerance: 0.007742718020581794 positive)
Pearson Correlation: 0.9461428529312469 Spearman Correlation: 0.9246491589835535 Coefficient of Determination: 0.8951787456809859 RMSE: 0.12282315805788663 NRMSE: 0.044504369178160245 MAPE: 222.1506338343099 Pearson Correlation: 0.04140968400538926 Spearman Correlation: 0.020391775458546865 Coefficient of Determination: -98.72518019782461 RMSE: 3.3280877506912208 NRMSE: 1.7168543140456545 MAPE: 2503.831729716033 Predictor: RandomForests Pearson Correlation: 0.5171089655618624 Spearman Correlation: 0.47345875267568865 Coefficient of Determination: 0.16066615908979343 RMSE: 0.3475545277028601 NRMSE: 0.12593467921692156 MAPE: 583.121901244578 Pearson Correlation: 0.16782423016535206 Spearman Correlation: 0.1362336188730533 Coefficient of Determination: -0.013527616609906756 RMSE: 0.3355136141460875 NRMSE: 0.17308077160769647 MAPE: 142.5104902655049 Protein: CDH3 x_train_column_count: 75 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.5277530454212466 Spearman Correlation: 0.5367439503466758 Coefficient of Determination: 0.2785232769514002 RMSE: 0.1748995774738833 NRMSE: 0.12464870039617093 MAPE: 276.3655386762538 Pearson Correlation: 0.19067041451051242 Spearman Correlation: 0.39771817603710774 Coefficient of Determination: -1.82441098826475 RMSE: 0.3492219518596935 NRMSE: 0.3108228918059824 MAPE: 298.955048445114 Predictor: ElasticNet Pearson Correlation: 0.52769570059206 Spearman Correlation: 0.5365888260908368 Coefficient of Determination: 0.27846275077840377 RMSE: 0.1749069136634885 NRMSE: 0.12465392880502908 MAPE: 274.45184111448197 Pearson Correlation: 0.1907816504903303 Spearman Correlation: 0.39916956570530804 Coefficient of Determination: -1.8207299568968343 RMSE: 0.3489943086303548 NRMSE: 0.3106202793228143 MAPE: 296.08163843624936 Predictor: RandomForests
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 8.12279743291394, tolerance: 0.002281064009154941 positive)
Pearson Correlation: 0.5677910860558321 Spearman Correlation: 0.5464475004188282 Coefficient of Determination: 0.2435480286302767 RMSE: 0.17908873870192735 NRMSE: 0.1276342622275235 MAPE: 328.12477936459476 Pearson Correlation: 0.48447826592796944 Spearman Correlation: 0.42002768114315636 Coefficient of Determination: 0.11752083723694207 RMSE: 0.19520449720713362 NRMSE: 0.17374058529926267 MAPE: 315.515961098473 Protein: PTEN x_train_column_count: 886 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.8116502789349715e-15 NRMSE: 9.307587200044436e-16 MAPE: 5.638706721262167e-12 Pearson Correlation: 0.16684158865394025 Spearman Correlation: 0.10255240090275441 Coefficient of Determination: -8.484171462564753 RMSE: 2.2960900802259387 NRMSE: 0.35901650851785455 MAPE: 3805.996233980143 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.05344703721706815, tolerance: 0.016979184196949017 positive)
Pearson Correlation: 0.9999998626696567 Spearman Correlation: 0.9999983046530069 Coefficient of Determination: 0.9999996827446545 RMSE: 0.00031642569764193305 NRMSE: 6.120893253674037e-05 MAPE: 0.3967113843895781 Pearson Correlation: 0.08716698477993394 Spearman Correlation: 0.10091647028017807 Coefficient of Determination: -5.301446649657367 RMSE: 1.8715841375445972 NRMSE: 0.2926407845429751 MAPE: 5938.70508762632 Predictor: RandomForests Pearson Correlation: 0.618910899657293 Spearman Correlation: 0.5593086343871564 Coefficient of Determination: 0.2916843734189397 RMSE: 0.47280350086799594 NRMSE: 0.09145843022051918 MAPE: 166.61284952118285 Pearson Correlation: 0.4111941839962659 Spearman Correlation: 0.4569558223918005 Coefficient of Determination: 0.13711413499209912 RMSE: 0.6925735497360981 NRMSE: 0.10829075908624784 MAPE: 177.52042582443522 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.8278642965759131 Spearman Correlation: 0.8051352218498519 Coefficient of Determination: 0.6853592935451314 RMSE: 0.1075845405606066 NRMSE: 0.06930877149982709 MAPE: 184.09684007116905 Pearson Correlation: 0.11091094830344791 Spearman Correlation: 0.2166884873876233 Coefficient of Determination: -68.84616694818132 RMSE: 1.7392370712209646 NRMSE: 1.6897116235351495 MAPE: 1259.1253613588779 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 3.1292064289016994, tolerance: 0.001979097117455079 positive)
Pearson Correlation: 0.826567277372929 Spearman Correlation: 0.8032092689867439 Coefficient of Determination: 0.68321328163137 RMSE: 0.107950808118542 NRMSE: 0.06954473062879177 MAPE: 181.68085477807742 Pearson Correlation: 0.11561283600044775 Spearman Correlation: 0.22110749510592403 Coefficient of Determination: -66.14631850440222 RMSE: 1.7052913845308035 NRMSE: 1.6567325533909159 MAPE: 1242.881659333515 Predictor: RandomForests Pearson Correlation: 0.535015304032934 Spearman Correlation: 0.43264056440880083 Coefficient of Determination: 0.17307487491964058 RMSE: 0.17441165739181072 NRMSE: 0.1123605459119412 MAPE: 143.075421167161 Pearson Correlation: 0.29256078601564717 Spearman Correlation: 0.31361238918191003 Coefficient of Determination: 0.061007052888959246 RMSE: 0.2016594878809015 NRMSE: 0.19591715603744403 MAPE: 127.70017969205061 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 9.913723599563033e-15 NRMSE: 2.2411492256274516e-15 MAPE: 1.1558286250632589e-11 Pearson Correlation: 0.006597346349897559 Spearman Correlation: -0.06417785757927158 Coefficient of Determination: -15.024338218792696 RMSE: 2.524619472422512 NRMSE: 0.7606566653879218 MAPE: 1220.2658249687195 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.24658866822059589, tolerance: 0.024436786734185888 positive)
Pearson Correlation: 0.999264325818053 Spearman Correlation: 0.9988818608406376 Coefficient of Determination: 0.998517077369434 RMSE: 0.025953154848459694 NRMSE: 0.005867108590134439 MAPE: 56.39783835776744 Pearson Correlation: -0.04896501014834452 Spearman Correlation: -0.013967755208917819 Coefficient of Determination: -39.93529679278019 RMSE: 4.035105071365357 NRMSE: 1.2157592863408728 MAPE: 895.2366181824137 Predictor: RandomForests Pearson Correlation: 0.6780557645899977 Spearman Correlation: 0.6089971478839292 Coefficient of Determination: 0.4507466227327015 RMSE: 0.4994790528391916 NRMSE: 0.11291489834727965 MAPE: 201.81819054960854 Pearson Correlation: 0.5826105400894136 Spearman Correlation: 0.483532816535266 Coefficient of Determination: 0.3158887337677051 RMSE: 0.5216380316817489 NRMSE: 0.15716722858745072 MAPE: 132.96725514294997 Protein: TP53 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 2.803160180098069e-15 NRMSE: 6.736746407349362e-16 MAPE: 1.0007903864716073e-11 Pearson Correlation: 0.16706574140275196 Spearman Correlation: 0.15956558061821222 Coefficient of Determination: -4.752348467093666 RMSE: 1.035661077713096 NRMSE: 0.32865609219125913 MAPE: 957.2970885148641 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.033356787039538004, tolerance: 0.01090027058925727 positive)
Pearson Correlation: 0.9999998325789636 Spearman Correlation: 0.9999976688978398 Coefficient of Determination: 0.9999996179042046 RMSE: 0.00027823619853606976 NRMSE: 6.686762762222297e-05 MAPE: 0.8807345005915899 Pearson Correlation: 0.12167380552350404 Spearman Correlation: 0.19858851107869177 Coefficient of Determination: -10.462574916081978 RMSE: 1.4619622375202503 NRMSE: 0.46393825765430635 MAPE: 1304.9993736573879 Predictor: RandomForests Pearson Correlation: 0.6522736857068524 Spearman Correlation: 0.5955850254943221 Coefficient of Determination: 0.37080883820779376 RMSE: 0.35704159046480755 NRMSE: 0.08580667879471462 MAPE: 640.5525464204939 Pearson Correlation: 0.6077390431140113 Spearman Correlation: 0.46335855399476744 Coefficient of Determination: 0.3053556548286668 RMSE: 0.35989541487510385 NRMSE: 0.11420900446658537 MAPE: 232.63716914762745 Protein: CTNNB1 x_train_column_count: 993 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 4.600615805124841e-15 NRMSE: 1.1111524985810168e-15 MAPE: 6.590867966726994e-12 Pearson Correlation: 0.17689643469403538 Spearman Correlation: 0.21649397124652428 Coefficient of Determination: -1.5869691502725018 RMSE: 1.290672077193133 NRMSE: 0.2713548223852353 MAPE: 3120.566871240978 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.05506599084815565, tolerance: 0.02722969373777278 positive)
Pearson Correlation: 0.9999999422207301 Spearman Correlation: 0.9999990174693013 Coefficient of Determination: 0.9999998670642999 RMSE: 0.00025938870090574636 NRMSE: 6.264822261272978e-05 MAPE: 0.18600358828420707 Pearson Correlation: 0.1042995305501971 Spearman Correlation: 0.14419381787802843 Coefficient of Determination: -2.325038187834079 RMSE: 1.4632502546443236 NRMSE: 0.3076381832151046 MAPE: 3576.2464511336902 Predictor: RandomForests Pearson Correlation: 0.6496455379927298 Spearman Correlation: 0.6499877260721313 Coefficient of Determination: 0.40594963317014865 RMSE: 0.5483298323867549 NRMSE: 0.13243402385922978 MAPE: 462.92385455535356 Pearson Correlation: 0.6913832106253599 Spearman Correlation: 0.506318033890697 Coefficient of Determination: 0.3085261488413984 RMSE: 0.6672800954764723 NRMSE: 0.14029099644194606 MAPE: 527.1599954719128 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.9541395094845281 Spearman Correlation: 0.8526189392838059 Coefficient of Determination: 0.910382203559376 RMSE: 0.15111939833449578 NRMSE: 0.036469676456909475 MAPE: 30.524166608000876 Pearson Correlation: 0.06332510208596669 Spearman Correlation: 0.3418122420479059 Coefficient of Determination: -24.06625897999632 RMSE: 2.2634545436944293 NRMSE: 0.9236328016381415 MAPE: 150.0451382692285 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 6.192577894892065, tolerance: 0.013709715616187399 positive)
Pearson Correlation: 0.9537460750912562 Spearman Correlation: 0.8503846260694508 Coefficient of Determination: 0.9096315444352068 RMSE: 0.15175098380819255 NRMSE: 0.03662209711325447 MAPE: 30.795506712837824 Pearson Correlation: 0.0663603988459859 Spearman Correlation: 0.3425304554919637 Coefficient of Determination: -24.75489807973153 RMSE: 2.294335546128138 NRMSE: 0.9362342063691089 MAPE: 153.31995129414742 Predictor: RandomForests Pearson Correlation: 0.8624943669575923 Spearman Correlation: 0.716972763739347 Coefficient of Determination: 0.738906218733604 RMSE: 0.2579415761317823 NRMSE: 0.06224909528483778 MAPE: 55.21408282475618 Pearson Correlation: 0.8379862050831705 Spearman Correlation: 0.7082279133519095 Coefficient of Determination: 0.6926887559886095 RMSE: 0.2506202975326634 NRMSE: 0.1022689535349153 MAPE: 70.4088749371017 Protein: CCND1 x_train_column_count: 858 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.249266753064264e-15 NRMSE: 1.4370291416313771e-15 MAPE: 5.247657264260021e-12 Pearson Correlation: 0.13047237920649474 Spearman Correlation: 0.1689073429843265 Coefficient of Determination: -15.434201879328654 RMSE: 0.9283533348019132 NRMSE: 0.5854902464694206 MAPE: 998.0444128222281 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.01912127964009712, tolerance: 0.003106817057166876 positive)
Pearson Correlation: 0.9999991247165562 Spearman Correlation: 0.9999936809793896 Coefficient of Determination: 0.9999980343150239 RMSE: 0.0003369175715971299 NRMSE: 0.00021525253421060932 MAPE: 0.7451815539757646 Pearson Correlation: 0.25051032085648456 Spearman Correlation: 0.2271025823264629 Coefficient of Determination: -5.524294477560831 RMSE: 0.584932524501726 NRMSE: 0.3689029544032076 MAPE: 1008.0142855827365 Predictor: RandomForests Pearson Correlation: 0.5845255069186686 Spearman Correlation: 0.5486191032700969 Coefficient of Determination: 0.27311659095308904 RMSE: 0.20487977133571603 NRMSE: 0.13089519130583305 MAPE: 470.69943813392194 Pearson Correlation: 0.48665102914047126 Spearman Correlation: 0.43169366201573584 Coefficient of Determination: 0.1971981619469998 RMSE: 0.20518384885868313 NRMSE: 0.1294045464547699 MAPE: 509.02857235263167 Protein: ERBB2 x_train_column_count: 664 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 4.929495237235095e-15 NRMSE: 8.398206445363639e-16 MAPE: 7.0190688287716286e-12 Pearson Correlation: 0.36640654162909914 Spearman Correlation: 0.2944080280405137 Coefficient of Determination: -4.0369707806460475 RMSE: 2.3266099887502825 NRMSE: 0.418952351487428 MAPE: 957.9748818929405 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.05809118865664245, tolerance: 0.051756548208396 positive)
Pearson Correlation: 0.999989887012824 Spearman Correlation: 0.9999466350982776 Coefficient of Determination: 0.99997975923239 RMSE: 0.004412706106022198 NRMSE: 0.0007517771105886498 MAPE: 3.8004951183574733 Pearson Correlation: 0.3554281389571156 Spearman Correlation: 0.25776164012244646 Coefficient of Determination: -3.748297601869093 RMSE: 2.2589563438596967 NRMSE: 0.40676996864257875 MAPE: 1136.6316169449472 Predictor: RandomForests Pearson Correlation: 0.8599602555036779 Spearman Correlation: 0.687160132543633 Coefficient of Determination: 0.7332875991930502 RMSE: 0.5065392682705221 NRMSE: 0.08629730110065627 MAPE: 371.5442931634038 Pearson Correlation: 0.787759728435935 Spearman Correlation: 0.6861209929174887 Coefficient of Determination: 0.5785044326009188 RMSE: 0.6730314804356515 NRMSE: 0.12119268924184311 MAPE: 193.8909153813567 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.7592125710943494 Spearman Correlation: 0.7491220461730529 Coefficient of Determination: 0.5764037281076924 RMSE: 0.3109178881461633 NRMSE: 0.0850155141368546 MAPE: 189.54963664789796 Pearson Correlation: -0.07484428754337946 Spearman Correlation: 0.0657339867080637 Coefficient of Determination: -22.83920102915046 RMSE: 1.8777313926962265 NRMSE: 0.9242305062811511 MAPE: 366.5424164956127 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 26.038808584262107, tolerance: 0.012277828558956158 positive)
Pearson Correlation: 0.7583955056603507 Spearman Correlation: 0.7467284086413959 Coefficient of Determination: 0.575163699011306 RMSE: 0.31137264365803324 NRMSE: 0.08513985974423895 MAPE: 194.65392059234722 Pearson Correlation: -0.07514432861539364 Spearman Correlation: 0.06605319268320055 Coefficient of Determination: -23.61118074668535 RMSE: 1.9078922507632226 NRMSE: 0.9390758591519403 MAPE: 374.9224653643693 Predictor: RandomForests Pearson Correlation: 0.5675874239979665 Spearman Correlation: 0.5882040683848929 Coefficient of Determination: 0.2991630452244778 RMSE: 0.3999246206510382 NRMSE: 0.10935297883102552 MAPE: 238.4221048362214 Pearson Correlation: 0.432174408021615 Spearman Correlation: 0.37350341026696093 Coefficient of Determination: 0.17592303821260047 RMSE: 0.34911740885092657 NRMSE: 0.17183765515606697 MAPE: 232.75962781290494 Fold: 5 Protein: RB1 x_train_column_count: 371 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.8554110939812628 Spearman Correlation: 0.7967702021497076 Coefficient of Determination: 0.7317281397062204 RMSE: 0.1211510504888502 NRMSE: 0.05985043719777407 MAPE: 326.4473949408986 Pearson Correlation: 0.06437421801012214 Spearman Correlation: 0.03525480367585631 Coefficient of Determination: -6.773950975876557 RMSE: 0.6701936128992023 NRMSE: 0.3379150176971958 MAPE: 3929.2929186973233 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 4.028376292203314, tolerance: 0.002943482941498817 positive)
Pearson Correlation: 0.8524285073724692 Spearman Correlation: 0.7941690774950431 Coefficient of Determination: 0.7266286637645036 RMSE: 0.12229708669698973 NRMSE: 0.060416596284508045 MAPE: 343.03635930635585 Pearson Correlation: 0.0799257064466165 Spearman Correlation: 0.05214778239130165 Coefficient of Determination: -7.017623308197196 RMSE: 0.6806160869203154 NRMSE: 0.3431700819435671 MAPE: 3859.6289579521313 Predictor: RandomForests Pearson Correlation: 0.6207380815146208 Spearman Correlation: 0.4758058764502778 Coefficient of Determination: 0.19442022954855576 RMSE: 0.2099393748718139 NRMSE: 0.10371320199375263 MAPE: 159.52248638851367 Pearson Correlation: 0.03199896194757723 Spearman Correlation: 0.15666778887517302 Coefficient of Determination: -0.12200311947955012 RMSE: 0.2546105634613614 NRMSE: 0.12837593704564135 MAPE: 186.02256739061608 Protein: CDH1 x_train_column_count: 835 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 8.525104463126078e-15 NRMSE: 1.3574574795589436e-15 MAPE: 4.082159387557489e-12 Pearson Correlation: 0.18532713034156606 Spearman Correlation: 0.2140101497524907 Coefficient of Determination: -3.184803961795599 RMSE: 2.3765634363275545 NRMSE: 0.46735824985301266 MAPE: 3795.4861454937236 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.10030215221593232, tolerance: 0.0682205483025332 positive)
Pearson Correlation: 0.9999993310606291 Spearman Correlation: 0.999992833305893 Coefficient of Determination: 0.9999986492493291 RMSE: 0.0013087420631765032 NRMSE: 0.00020839178102234054 MAPE: 0.515241083871236 Pearson Correlation: -0.012213473356163969 Spearman Correlation: 0.08406339231162484 Coefficient of Determination: -29.009808189130926 RMSE: 6.364194763367622 NRMSE: 1.251537779663649 MAPE: 5212.169427722253 Predictor: RandomForests Pearson Correlation: 0.7916230982259471 Spearman Correlation: 0.7066482402823967 Coefficient of Determination: 0.6220034915121988 RMSE: 0.692325549611328 NRMSE: 0.11023941110336102 MAPE: 150.78755031277004 Pearson Correlation: 0.648717665027404 Spearman Correlation: 0.5911278084866108 Coefficient of Determination: 0.4138897133087699 RMSE: 0.8894090084389707 NRMSE: 0.17490491995024104 MAPE: 573.9971245730172 Protein: CDH2 x_train_column_count: 474 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 0.9362841511332414 Spearman Correlation: 0.9264017861560123 Coefficient of Determination: 0.8766280116632941 RMSE: 0.1261443243914475 NRMSE: 0.06195389440177176 MAPE: 555.4322411629586 Pearson Correlation: 0.18842746545402023 Spearman Correlation: 0.23373637294295274 Coefficient of Determination: -15.615633235005514 RMSE: 1.700160276844507 NRMSE: 0.6357759575358551 MAPE: 65139.36603422525 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 4.654524882480011, tolerance: 0.0069390679727214565 positive)
Pearson Correlation: 0.9308008610765771 Spearman Correlation: 0.9189414499563608 Coefficient of Determination: 0.8663692885747081 RMSE: 0.13128423361818523 NRMSE: 0.06447828378674192 MAPE: 425.7996636343896 Pearson Correlation: 0.16400532196308576 Spearman Correlation: 0.1939054026927064 Coefficient of Determination: -9.8774740886226 RMSE: 1.3756103825529233 NRMSE: 0.5144103294702703 MAPE: 39109.85067641032 Predictor: RandomForests Pearson Correlation: 0.5888866616482243 Spearman Correlation: 0.5235015174126789 Coefficient of Determination: 0.16263445485642447 RMSE: 0.32863739285234245 NRMSE: 0.16140533021577644 MAPE: 456.42380133341203 Pearson Correlation: 0.14611935521102742 Spearman Correlation: 0.17836404239972267 Coefficient of Determination: 0.004461307227862976 RMSE: 0.41616014709345905 NRMSE: 0.1556233371701135 MAPE: 4193.07498211373 Protein: CDH3 x_train_column_count: 75 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.5502185820559152 Spearman Correlation: 0.5575790999314021 Coefficient of Determination: 0.3027404880396217 RMSE: 0.17015031495914854 NRMSE: 0.11937357226184861 MAPE: 530.6238588308955 Pearson Correlation: 0.24814899447962915 Spearman Correlation: 0.43303532462998295 Coefficient of Determination: -0.3950296920795784 RMSE: 0.26385153164014113 NRMSE: 0.2380493613621028 MAPE: 434.77829580426624 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 7.733730192384534, tolerance: 0.0022338465809413456 positive)
Pearson Correlation: 0.5498660230654021 Spearman Correlation: 0.557205815340837 Coefficient of Determination: 0.302352635835053 RMSE: 0.17019763163175813 NRMSE: 0.11940676855794896 MAPE: 528.3895058082835 Pearson Correlation: 0.24832303666017516 Spearman Correlation: 0.4346413296923903 Coefficient of Determination: -0.4023723672337185 RMSE: 0.26454500557163096 NRMSE: 0.23867502013878777 MAPE: 432.67714467788636 Predictor: RandomForests Pearson Correlation: 0.5514431726898725 Spearman Correlation: 0.5520588573626909 Coefficient of Determination: 0.24516672619768298 RMSE: 0.17703578114088928 NRMSE: 0.12420425797054027 MAPE: 425.0672206809644 Pearson Correlation: 0.45835080231151626 Spearman Correlation: 0.44538959338645123 Coefficient of Determination: 0.1700144040149717 RMSE: 0.20351816192031405 NRMSE: 0.18361602136460456 MAPE: 151.82735538294335 Protein: PTEN x_train_column_count: 886 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 5.324906624037677e-15 NRMSE: 8.326020833457395e-16 MAPE: 9.956710431311237e-12 Pearson Correlation: 0.05062067435039004 Spearman Correlation: 0.0856693973740321 Coefficient of Determination: -3.687486826189419 RMSE: 1.5625339624217096 NRMSE: 0.3022543257547411 MAPE: 2211.5117611448413 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.04584891815642315, tolerance: 0.017420030134596684 positive)
Pearson Correlation: 0.9999998941545499 Spearman Correlation: 0.9999984587754607 Coefficient of Determination: 0.999999757647437 RMSE: 0.00028012838765532054 NRMSE: 4.380085804945986e-05 MAPE: 0.2561250331440479 Pearson Correlation: -0.01812155051478466 Spearman Correlation: 0.05875634359530669 Coefficient of Determination: -4.3873789541490575 RMSE: 1.6751287726856856 NRMSE: 0.3240345041561602 MAPE: 1585.8771391980204 Predictor: RandomForests Pearson Correlation: 0.5767879497498114 Spearman Correlation: 0.5404464924927253 Coefficient of Determination: 0.2875790758116853 RMSE: 0.48028790095568463 NRMSE: 0.07509778765627154 MAPE: 251.18004522254404 Pearson Correlation: 0.403829844219503 Spearman Correlation: 0.4793033320909623 Coefficient of Determination: 0.14630872219182867 RMSE: 0.6668219047627856 NRMSE: 0.12898907164244536 MAPE: 520.5162711372515 Protein: BRCA2 x_train_column_count: 363 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 0.8604115793545983 Spearman Correlation: 0.8391950090828283 Coefficient of Determination: 0.7403080858874742 RMSE: 0.10215854678493246 NRMSE: 0.06581320456429858 MAPE: 165.85187723672814 Pearson Correlation: -0.01989545286289579 Spearman Correlation: -0.0016284492325340713 Coefficient of Determination: -6.822294091083317 RMSE: 0.4645197258371659 NRMSE: 0.6074932659872698 MAPE: 1034.4653850807726 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 2.826749876732138, tolerance: 0.0021620874757223526 positive)
Pearson Correlation: 0.8593271052728015 Spearman Correlation: 0.8370023857388067 Coefficient of Determination: 0.7384430202486851 RMSE: 0.10252473362914163 NRMSE: 0.0660491116953723 MAPE: 171.47793366462273 Pearson Correlation: -0.0121508675235696 Spearman Correlation: -0.008995124627489122 Coefficient of Determination: -6.493631508688492 RMSE: 0.4546563465222402 NRMSE: 0.5945940580948671 MAPE: 995.0407913882793 Predictor: RandomForests Pearson Correlation: 0.5431520294910669 Spearman Correlation: 0.4780730344780478 Coefficient of Determination: 0.19354368844234138 RMSE: 0.18002628323887607 NRMSE: 0.1159776345555652 MAPE: 160.3118006059256 Pearson Correlation: 0.13736967669204084 Spearman Correlation: 0.09695632115113655 Coefficient of Determination: -0.05486386739795335 RMSE: 0.17058282380074521 NRMSE: 0.22308614895801374 MAPE: 196.22417219622807 Protein: CDKN2A x_train_column_count: 614 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 8.178924420431755e-15 NRMSE: 2.0826880956511817e-15 MAPE: 5.7839740445722355e-12 Pearson Correlation: 0.00937496573247892 Spearman Correlation: 0.03443683836456814 Coefficient of Determination: -18.208665114591632 RMSE: 2.6557366616897164 NRMSE: 0.668261156410185 MAPE: 1769.8228922581688 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.16391152470947573, tolerance: 0.024854257731250624 positive)
Pearson Correlation: 0.9995970594369622 Spearman Correlation: 0.9993957629194398 Coefficient of Determination: 0.9991940453041156 RMSE: 0.019295879392940744 NRMSE: 0.004913518727035406 MAPE: 23.897312679321157 Pearson Correlation: 0.06031451849642026 Spearman Correlation: 0.0513397922667365 Coefficient of Determination: -15.242613544072238 RMSE: 2.442105220873926 NRMSE: 0.6145052265604605 MAPE: 1837.3675172988917 Predictor: RandomForests Pearson Correlation: 0.7059872269055824 Spearman Correlation: 0.6337434201182001 Coefficient of Determination: 0.4941790722697704 RMSE: 0.4834011261541003 NRMSE: 0.12309366355684864 MAPE: 215.56277213970233 Pearson Correlation: 0.3673934879684137 Spearman Correlation: 0.33207220697604445 Coefficient of Determination: -0.0764074952327276 RMSE: 0.6286729480843993 NRMSE: 0.15819253367665617 MAPE: 502.41296054935145 Protein: TP53 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.640568665508078e-15 NRMSE: 6.715757434085502e-16 MAPE: 9.029646923270314e-12 Pearson Correlation: 0.19221683845258838 Spearman Correlation: 0.08680158106709561 Coefficient of Determination: -1.3464207060648414 RMSE: 0.8090153538864676 NRMSE: 0.21669086752014668 MAPE: 453.8767312415372 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.03225737268038473, tolerance: 0.009662504276089433 positive)
Pearson Correlation: 0.99999984331704 Spearman Correlation: 0.9999985358366877 Coefficient of Determination: 0.99999964118403 RMSE: 0.00025385726331161206 NRMSE: 6.456350957847658e-05 MAPE: 0.7948096803296328 Pearson Correlation: 0.28240445775150796 Spearman Correlation: 0.22023466626765922 Coefficient of Determination: -0.9318291843639817 RMSE: 0.734071197400797 NRMSE: 0.19661743602539092 MAPE: 366.3352644012029 Predictor: RandomForests Pearson Correlation: 0.6494504641594678 Spearman Correlation: 0.5976737280102739 Coefficient of Determination: 0.37248863991397363 RMSE: 0.3357101777164568 NRMSE: 0.08538115865521931 MAPE: 759.2323708412493 Pearson Correlation: 0.5046538026736783 Spearman Correlation: 0.40734972674220465 Coefficient of Determination: 0.22678733554446173 RMSE: 0.46441186000847356 NRMSE: 0.12439048078437755 MAPE: 144.26997802582628 Protein: CTNNB1 x_train_column_count: 993 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999614693844 Coefficient of Determination: 1.0 RMSE: 4.907138758557662e-15 NRMSE: 9.652121869704294e-16 MAPE: 5.595502882007188e-12 Pearson Correlation: 0.1513807963190951 Spearman Correlation: 0.14482225464157908 Coefficient of Determination: -4.221588464406208 RMSE: 1.548501811412583 NRMSE: 0.495934784383944 MAPE: 662.2554884519235 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.05896582997362612, tolerance: 0.030747074518831245 positive)
Pearson Correlation: 0.9999999499935215 Spearman Correlation: 0.9999982468569871 Coefficient of Determination: 0.999999885934733 RMSE: 0.0002553215504249582 NRMSE: 5.022060393881948e-05 MAPE: 0.1222581870085487 Pearson Correlation: 0.12315342646852927 Spearman Correlation: 0.15587974912405395 Coefficient of Determination: -4.960260484939639 RMSE: 1.6544095097558198 NRMSE: 0.5298535768292301 MAPE: 1002.6212248954522 Predictor: RandomForests Pearson Correlation: 0.6636273843817175 Spearman Correlation: 0.6666348660633338 Coefficient of Determination: 0.42580237751724903 RMSE: 0.5728507121583366 NRMSE: 0.11267716604215906 MAPE: 450.07674070033784 Pearson Correlation: 0.6548358538903155 Spearman Correlation: 0.5739547874661779 Coefficient of Determination: 0.42458383660141763 RMSE: 0.5140453395786565 NRMSE: 0.1646320093193536 MAPE: 184.49613990582574 Protein: CCNE1 x_train_column_count: 352 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.955583530351512 Spearman Correlation: 0.8733971071522536 Coefficient of Determination: 0.9131398834790593 RMSE: 0.1322684809802215 NRMSE: 0.047112548879865185 MAPE: 27.693758522898797 Pearson Correlation: 0.7051072893789501 Spearman Correlation: 0.4535941844661405 Coefficient of Determination: 0.1540543481430946 RMSE: 0.5960883592821477 NRMSE: 0.14385413019334115 MAPE: 112.60809253453988 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 4.780763278312118, tolerance: 0.010836139816194496 positive)
Pearson Correlation: 0.9549010484164644 Spearman Correlation: 0.870727359372118 Coefficient of Determination: 0.911836008428531 RMSE: 0.1332575377407428 NRMSE: 0.04746483980079886 MAPE: 28.41788863103941 Pearson Correlation: 0.7240592033729483 Spearman Correlation: 0.4299829174927368 Coefficient of Determination: 0.24845620510558164 RMSE: 0.5618450464711956 NRMSE: 0.1355901842486656 MAPE: 112.80544831478412 Predictor: RandomForests Pearson Correlation: 0.8635406701238967 Spearman Correlation: 0.7124395708693522 Coefficient of Determination: 0.742785591603353 RMSE: 0.2276112944048001 NRMSE: 0.08107258928042746 MAPE: 54.250959498407816 Pearson Correlation: 0.7864489412152244 Spearman Correlation: 0.7340389312404989 Coefficient of Determination: 0.5874084148407293 RMSE: 0.416293464335031 NRMSE: 0.10046419005599609 MAPE: 77.13768509365346 Protein: CCND1 x_train_column_count: 858 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.6982325878752993e-15 NRMSE: 1.0696315302046377e-15 MAPE: 4.16714511050611e-12 Pearson Correlation: 0.035074929099314166 Spearman Correlation: 0.06410803127221038 Coefficient of Determination: -3.901405176289532 RMSE: 0.6109487455030461 NRMSE: 0.3903277146363106 MAPE: 843.7969381566845 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.017525435072179837, tolerance: 0.0027873943484564415 positive)
Pearson Correlation: 0.9999993071063066 Spearman Correlation: 0.9999941433467513 Coefficient of Determination: 0.9999984080722825 RMSE: 0.0002871902832452909 NRMSE: 0.00018088675504213122 MAPE: 1.5869395979239225 Pearson Correlation: 0.09726270270462486 Spearman Correlation: 0.1263980847641492 Coefficient of Determination: -4.962033388864496 RMSE: 0.6738165546975892 NRMSE: 0.43049319245702783 MAPE: 1056.6624693185947 Predictor: RandomForests Pearson Correlation: 0.576429311531941 Spearman Correlation: 0.5729290416162808 Coefficient of Determination: 0.293958251420527 RMSE: 0.19125960771186185 NRMSE: 0.12046483404203734 MAPE: 524.7116387936928 Pearson Correlation: 0.33368855461753166 Spearman Correlation: 0.28471427324530235 Coefficient of Determination: 0.10895202712032204 RMSE: 0.26049237663153046 NRMSE: 0.16642540769446496 MAPE: 246.24347193643658 Protein: ERBB2 x_train_column_count: 664 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 5.92413738061152e-15 NRMSE: 1.0092743037312844e-15 MAPE: 6.431258641835469e-12 Pearson Correlation: 0.3645811795528848 Spearman Correlation: 0.274235339592763 Coefficient of Determination: -4.864961248666829 RMSE: 2.101417386076625 NRMSE: 0.4649667852808109 MAPE: 4892.50604885057 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.06963267066806865, tolerance: 0.05684616744754108 positive)
Pearson Correlation: 0.9999811976511763 Spearman Correlation: 0.9999056770545726 Coefficient of Determination: 0.9999622685738047 RMSE: 0.006314094359049839 NRMSE: 0.001075709893018355 MAPE: 8.69026935711594 Pearson Correlation: 0.28154851888649113 Spearman Correlation: 0.14428359455853565 Coefficient of Determination: -3.833520934328315 RMSE: 1.907706456462476 NRMSE: 0.4221056436469689 MAPE: 4546.7260123465985 Predictor: RandomForests Pearson Correlation: 0.8543449139109744 Spearman Correlation: 0.6847598504742807 Coefficient of Determination: 0.7244387340547666 RMSE: 0.539595777834539 NRMSE: 0.09192902155724127 MAPE: 535.4483284342853 Pearson Correlation: 0.7998916837336487 Spearman Correlation: 0.6274757112782302 Coefficient of Determination: 0.6262959110101587 RMSE: 0.5304490457891352 NRMSE: 0.11736896687446294 MAPE: 212.76310810289618 Protein: ERBB3 x_train_column_count: 247 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.7478124492554005 Spearman Correlation: 0.7271335161367466 Coefficient of Determination: 0.5592234592613607 RMSE: 0.3113141964574562 NRMSE: 0.08401476640141635 MAPE: 201.79148007743274 Pearson Correlation: 0.23968660300494082 Spearman Correlation: 0.25489345253681467 Coefficient of Determination: -1.122248719681762 RMSE: 0.6074385874121749 NRMSE: 0.293897247688343 MAPE: 400.2474501853244 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 26.02195867552834, tolerance: 0.011829371061673479 positive)
Pearson Correlation: 0.7473029508512888 Spearman Correlation: 0.7263991610188484 Coefficient of Determination: 0.5584616932400497 RMSE: 0.3115830925773184 NRMSE: 0.08408733374641231 MAPE: 204.78344359791373 Pearson Correlation: 0.22930309613928584 Spearman Correlation: 0.24380104490080923 Coefficient of Determination: -1.1778185343513985 RMSE: 0.6153399070319532 NRMSE: 0.2977201462290033 MAPE: 400.64221558842456 Predictor: RandomForests Pearson Correlation: 0.5387861282858313 Spearman Correlation: 0.5368780097235907 Coefficient of Determination: 0.26504248757830096 RMSE: 0.4019951434216424 NRMSE: 0.10848695129677001 MAPE: 253.7475407492331 Pearson Correlation: 0.5387142377677739 Spearman Correlation: 0.5453309891644534 Coefficient of Determination: 0.23587478546326823 RMSE: 0.3644907423148453 NRMSE: 0.1763516974293343 MAPE: 241.79197989064568
1000 Most Variable mRNAs
ZScore
scenario = Scenario.ThousandMostVariableGenes_Mutations
normalizeTechnique = NormalizeTechnique.ZScore
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.648331 | 0.348611 | 0.770359 | -0.860535 | -0.0703 | -0.190586 | 0.719543 | 0.931178 | -0.283665 | -0.568745 | ... | 0.238689 | -0.239582 | -0.271725 | -0.222943 | -0.211122 | 0.792968 | -0.619672 | -0.946953 | -0.457066 | 0.454464 |
| TCGA-A1-A0SH-01 | -0.757220 | -0.562180 | -0.708360 | -0.860535 | -0.0703 | -0.190586 | -0.527186 | -0.611509 | -0.283665 | -0.568745 | ... | 0.739490 | -0.107967 | -1.200905 | -0.903627 | 1.252346 | 0.854083 | 0.108510 | -0.031025 | 0.991113 | -0.083768 |
| TCGA-A1-A0SJ-01 | -0.405237 | 0.254851 | -0.925065 | -0.223237 | -0.0703 | -0.190586 | -0.525012 | -0.390046 | -0.283665 | 1.475888 | ... | 0.592975 | 5.821247 | -1.079296 | -0.618408 | 0.444358 | -0.369825 | -0.573411 | -0.555512 | -0.488416 | -0.083768 |
| TCGA-A1-A0SK-01 | 3.940101 | 14.857648 | -0.228301 | -0.311392 | -0.0703 | -0.004913 | -0.697917 | -0.754652 | -0.283665 | -0.568745 | ... | 0.051750 | -0.027856 | 2.390553 | 0.357970 | 1.337526 | -1.597758 | 1.043918 | 0.590450 | -0.467061 | -0.083768 |
| TCGA-A1-A0SQ-01 | -1.114818 | -1.129592 | -0.842620 | -0.860535 | -0.0703 | -0.190586 | -0.507239 | -0.137487 | -0.283665 | -0.568745 | ... | 1.412610 | -0.008283 | -0.929428 | -0.853107 | 0.062384 | -0.434733 | -1.040418 | -0.606257 | -0.580936 | -0.083768 |
5 rows × 20133 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 1002 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'OR6C74', 'GYS2', 'IQCF6', 'IL13', 'ANKRD18DP', 'C10ORF53', 'LINC00469', 'LINC00696', 'LINC00895', 'CYP11B2', 'ADAM18', 'TCP10L2', 'C17ORF78', 'SNORA5B', 'FMO6P', 'PLET1', 'SCARNA11', 'LY6G6D', 'CGB5', 'POTEH', 'CLCA4', 'PLG', 'SST', 'TPD52L3', 'ZNF479', 'OR8B3', 'TMPRSS11F', 'TAAR9', 'OR2A2', 'F13B', 'SNORD89', 'OR1S2', 'OR5H14', 'ZCCHC13', 'OLAH', 'OPRD1', 'OR4D6', 'NOX3', 'LEUTX', 'VWC2L', 'EPS8L3', 'RPL13AP17', 'RAX2', 'DPPA5', 'KRTAP4-5', 'OR5T2', 'PRDM14', 'LOC285627', 'TKTL2', 'C18ORF42', 'OR10V1', 'OR2G2', 'OR8A1', 'SNORA71A', 'ZPBP', 'GPR78', 'FCAMR', 'BEND2', 'ACTRT2', 'TSGA13', 'SLC1A6', 'TTTY14', 'CST11', 'SSX5', 'STATH', 'CT45A1', 'OR5H6', 'IL26', 'LIPN', 'SPANXA2', 'OR6M1', 'ASB17', 'LINC01205', 'OR9G4', 'ACTR3BP2', 'SNORA74A', 'BARHL2', 'OR8D4', 'RTP2', 'LMNTD1', 'KLK9', 'OR4C12', 'LCNL1', 'TMEM202', 'OR11H4', 'OR2L8', 'GAGE2B', 'LOC145845', 'HNRNPCL1', 'KRTAP21-2', 'SERPINB3', 'DEFB110', 'KRT85', 'PWAR4', 'MYBPC2', 'LOC646813', 'C2ORF83', 'GPR52', 'PROP1', 'SSX8', 'LPO', 'NCOR1P1', 'SPATA31C1', 'ANKUB1', 'LINC00488', 'GOT1L1', 'OR2M4', 'LOC100129935', 'USP26', 'OR4C16', 'LINC00934', 'ZIM3', 'BPIFA3', 'DYDC1', 'FAM27B', 'COL6A4P1', 'TEX13B', 'CABS1', 'UGT2A3', 'OR4D9', 'FAM138D', 'ZAR1', 'FOXN3-AS2', 'POTED', 'CPLX4', 'SYCN', 'OR2M7', 'GSTA5', 'HIST1H4F', 'OR2T35', 'DUXA', 'SLC32A1', 'OR4K17', 'SLC38A8', 'TBC1D3P2', 'LINC00114', 'HTR3E', 'C3ORF30', 'KRTAP19-2', 'ASB18', 'CLRN2', 'RGS8', 'TMEM72', 'RBPJL', 'TRHR', 'HBD', 'CTRB1', 'B3GNT6', 'GABRG3', 'DAOA', 'WFDC8', 'DEFB104A', 'FRMPD4', 'LINC01565', 'KRTAP6-1', 'KRTAP25-1', 'HSFY2', 'EPPIN', 'LINC00608', 'OR56A1', 'OR6Y1', 'OR7A17', 'OR8H2', 'IL31', 'FBXW12', 'ALLC', 'OR4K2', 'OR4X2', 'GRIN2B', 'PRAMEF20', 'OR8G2', 'MYF5', 'LINC01566', 'KIR3DL3', 'MMD2', 'ITIH1', 'MAGEB3', 'ABRA', 'TCERG1L', 'OR8J3', 'CYLC2', 'SLC25A31', 'FAM169B', 'LINC00113', 'LOC729609', 'BMP15', 'FAM74A3', 'CFHR4', 'DEFB126', 'DEFB129', 'DEFB134', 'OR6B3', 'OR2AT4', 'FAM170B', 'INS', 'RHAG', 'CT47A1', 'CSNK1A1P1', 'OTOP1', 'GAGE12F', 'SRY', 'NKAIN3', 'PSKH2', 'MYH1', 'CCK', 'TCP10', 'SNORA70B', 'OR52H1', 'CD200R1L', 'OR5P3', 'REG4', 'POU6F2', 'TRPV5', 'KRTAP10-3', 'GPRC6A', 'ODF3', 'SPINK1', 'SCARNA8', 'FTHL17', 'ZNF705A', 'HOXC12', 'OR6B2', 'AQP2', 'KRTAP11-1', 'OR10H2', 'OR51I2', 'SNORA47', 'ACOT12', 'LCN9', 'DISC2', 'GUCY2EP', 'FGF6', 'TFF2', 'CHIAP2', 'CXADRP2', 'SNORA38B', 'C20ORF166-AS1', 'SNORD94', 'TMEM88B', 'OR4S1', 'OR5M10', 'MGC27382', 'MBD3L5', 'CNTN5', 'PYDC2', 'SNORA59B', 'ENAM', 'FIGLA', 'CCDC37', 'PCGEM1', 'PSG11', 'OR5AN1', 'OR6F1', 'OR14I1', 'SNORD115-26', 'LOC392196', 'SNCB', 'PISRT1', 'BOLL', 'OR7C2', 'SPATA19', 'TTTY8', 'TTTY9B', 'NANOS2', 'AVPR1B', 'XAGE3', 'CNGB1', 'MOGAT3', 'OR2T12', 'NLRP8', 'KRTAP10-7', 'MAGEA1', 'SLC51B', 'CYP2C18', 'CNTNAP4', 'UGT1A4', 'TAS2R60', 'OPN1MW', 'RESP18', 'RPL3L', 'OACYLP', 'IHH', 'LRRTM1', 'SLC17A6', 'MAGEB6', 'SNAR-F', 'MAGEA5', 'CLEC4G', 'PRAMEF1', 'PRDM9', 'SPDYC', 'SPRR2C', 'GRK1', 'KRTAP2-1', 'DNTT', 'KRTAP19-6', 'FOXR1', 'OR6K6', 'APCS', 'SFTPC', 'BSX', 'NEU2', 'PAQR9', 'OR5M3', 'KCNIP4-IT1', 'SLC6A5', 'MUSK', 'PAPOLB', 'CNGA2', 'IL17F', 'SLC2A2', 'GOLGA6L1', 'C10ORF120', 'ZFY', 'F9', 'CALR3', 'ANP32D', 'KRTAP10-12', 'C11ORF94', 'CA6', 'APOA2', 'CCDC166', 'HAO1', 'LINC00304', 'DEFB123', 'PPIAL4E', 'KGFLP1', 'SFTPB', 'LINC00575', 'OR5M8', 'ALX4', 'DKFZP434K028', 'EPB42', 'HCRTR1', 'SPANXN3', 'IZUMO1R', 'KRT3', 'OR4D11', 'KRTAP3-2', 'OR52R1', 'SSX9', 'LELP1', 'CRYGB', 'FTMT', 'OTOL1', 'AWAT1', 'OR7E24', 'LINC00410', 'LINC01553', 'BTN1A1', 'KRT25', 'PLA2G12B', 'KRTAP10-11', 'SCN1A', 'OR1K1', 'C16ORF90', 'ANXA10', 'KRTAP13-1', 'GABRR3', 'PROKR2', 'CELA2B', 'MT4', 'OR12D2', 'C12ORF77', 'COX7B2', 'ALPPL2', 'ZNF679', 'FKBP6', 'FOXD4L3', 'IQCJ', 'OR1E2', 'LGALS14', 'OR4D5', 'TMEM14E', 'PRR32', 'OR2T10', 'HBE1', 'NXNL1', 'PRB4', 'LOC286238', 'LINC01591', 'AADACL3', 'PRAMEF16', 'AGXT2', 'AKR1C8P', 'TMPRSS11BNL', 'SCTR', 'BANF2', 'BTF3P11', 'RPS4Y2', 'CDX4', 'SLC36A3', 'CHAT', 'OR4K5', 'OR10W1', 'MTNR1B', 'YIPF7', 'SPACA3', 'LYZL1', 'TNP1', 'EPGN', 'NEUROD1', 'KRTAP9-2', 'SVOP', 'SLC5A8', 'ANGPTL3', 'SPRR2E', 'OR2G6', 'INSC', 'OR51B5', 'NCAN', 'OR7D4', 'OR2M3', 'PLCZ1', 'SLC10A1', 'LINC01142', 'DAW1', 'OR6A2', 'AADAC', 'NKX2-3', 'TRIM49', 'ACSM2B', 'GBA3', 'ITPK1-AS1', 'OCSTAMP', 'BCYRN1', 'CETN1', 'HIST1H3B', 'SNORA16B', 'GKN2', 'EDDM3B', 'PCSK2', 'HIST1H4B', 'FAM170A', 'HULC', 'LOC647859', 'MCF2', 'RSPH6A', 'C1ORF141', 'C1ORF94', 'OR5B17', 'OR4D10', 'CTRC', 'KRTAP1-3', 'SLC9C1', 'PTH2', 'BET1P1', 'SHH', 'GPHA2', 'OR10AG1', 'C12ORF50', 'ZSCAN10', 'LHX3', 'OR10G8', 'PRAC1', 'PSG4', 'DEFB119', 'HS3ST4', 'PRG1', 'IL3', 'GUCY2F', 'DMRT1', 'LINC00520', 'OR1M1', 'OR1N1', 'OR1S1', 'NLRP13', 'UGT2B28', 'FAM47C', 'MMP23A', 'KRT71', 'TDRG1', 'FAM138B', 'NXPE1', 'FAM150A', 'AMER3', 'PCDH8', 'GCGR', 'NPSR1-AS1', 'ARL13A', 'DRD3', 'HSD52', 'TARM1', 'TCEB3C', 'LINC00202-2', 'SH2D7', 'IGFBP1', 'OR5E1P', 'OR2B3', 'OR5H2', 'SNORA27', 'SLCO6A1', 'CALCB', 'TMEM8C', 'GABRA4', 'SNORD15B', 'LINC00479', 'LOC284798', 'CHRNB3', 'HGC6.3', 'CCKAR', 'XKR7', 'ISL1', 'MRGPRG-AS1', 'CGB8', 'SNORA36B', 'LINC00523', 'MYH7', 'CGB2', 'GUCA1C', 'NEUROG3', 'PRSS57', 'FAM71B', 'VWA5B1', 'PROKR1', 'SLCO1B7', 'VGLL2', 'UBE2DNL', 'NKX6-2', 'PRKY', 'CACNG7', 'GH1', 'CCER1', 'PPP1R2P9', 'TRPM3', 'C7ORF72', 'IL36A', 'BPIFB4', 'UGT2B10', 'USP50', 'MTVR2', 'MUC13', 'LINC00032', 'FGF23', 'OR4K1', 'KRTAP12-2', 'OR52N2', 'DEFB118', 'KRTAP1-5', 'DEFB115', 'AIRE', 'RNF151', 'EXD1', 'FGF16', 'APOA5', 'PASD1', 'SNORA77', 'OR2A14', 'POU4F3', 'SYT14P1', 'HTR1A', 'FMO9P', 'SNORD97', 'ZFAT-AS1', 'B4GALNT2', 'OLFM3', 'HMSD', 'OR2B11', 'FOXE3', 'OR10K1', 'LINC00923', 'OR1L4', 'DSCR10', 'KDM5D', 'ANKRD34C', 'CHRNA9', 'DPRX', 'POU4F2', 'KRTAP3-3', 'MYADML', 'SFTA3', 'OR52K2', 'HCRTR2', 'PTCHD3', 'LINC00710', 'OR1L1', 'MEP1A', 'FAM9B', 'SNORA2B', 'MAGEA9B', 'KRTAP12-1', 'LINC00964', 'OTC', 'GPR148', 'MYH16', 'PACRG-AS1', 'C12ORF42', 'ITLN2', 'OTOR', 'SPATA3', 'OR10AD1', 'HIST1H3F', 'LOC100129055', 'PLD5', 'LOC100132831', 'FAM83A-AS1', 'ARID3C', 'IGLL1', 'C11ORF87', 'MYL1', 'LINC00052', 'OVCH1', 'NPSR1', 'CLEC18C', 'MIR1-1HG', 'TMSB4Y', 'POM121L2', 'HRK', 'CDH10', 'VIL1', 'CLEC4M', 'SNORA64', 'SLC39A12', 'VCX3A', 'CLRN1-AS1', 'OR51F2', 'CMTM5', 'PSG3', 'HTR4', 'HPVC1', 'OR2M2', 'LOC100130264', 'C4ORF50', 'SOX3', 'HIST2H2AB', 'C7ORF57', 'ATOH7', 'AATK-AS1', 'CPA2', 'SPINK14', 'FERD3L', 'TSNAX-DISC1', 'H3F3AP5', 'OR5AR1', 'KRTAP4-8', 'CYP2W1', 'C15ORF43', 'C20ORF144', 'NF1P2', 'KLK12', 'DEFB108B', 'IFNA21', 'OR13C3', 'PPP1R3A', 'PRSS48', 'ADGRG7', 'ADAMTS20', 'CACNG3', 'KRTAP10-1', 'SNORA68', 'MBL2', 'PGA4', 'CXCL6', 'SLC12A1', 'COL20A1', 'KRT18P55', 'PRKAG3', 'S100A7', 'KRT73', 'LINC01101', 'LOC100130417', 'CELP', 'SNORA44', 'CLCA3P', 'LRRC30', 'TMPRSS11B', 'KRTAP7-1', 'SCARNA1', 'XIRP2', 'MCHR2', 'MMP21', 'PTX4', 'FAM19A1', 'MGC16025', 'SLURP1', 'TBX20', 'CCDC54', 'FFAR1', 'KRTAP5-2', 'FER1L6', 'HSFY1P1', 'GSX2', 'PPY2P', 'HTR6', 'NEUROD6', 'NUTM1', 'C2ORF27B', 'HEATR9', 'OR2T2', 'SLC28A2', 'HTR2C', 'KCNJ13', 'LINC01548', 'MYL2', 'FEZF1', 'MYH4', 'TMPRSS7', 'TMEM212', 'LINC00691', 'PRO0611', 'BARHL1', 'LOC285629', 'PATE3', 'SNORA72', 'OR5M1', 'TSHB', 'HILS1', 'C1ORF140', 'RFPL1', 'SNORA61', 'CDH19', 'SNORA5C', 'LOC644669', 'NYAP2', 'CLRN1', 'SALL3', 'GRM7', 'GCKR', 'TPTE2', 'ADGRE3', 'LRRC52', 'LRRIQ4', 'WFDC6', 'KRT12', 'CAPZA3', 'FAM71E2', 'C14ORF178', 'ADH6', 'PRTN3', 'LRRC74A', 'OR12D3', 'FNDC9', 'C5ORF47', 'A1CF', 'OR10R2', 'ZIC5', 'C12ORF56', 'PAGE2', 'C9ORF171', 'FSHR', 'OPRM1', 'OR4F17', 'KAAG1', 'CTXN3', 'CTRB2', 'OR5K1', 'FRG2DP', 'CAPNS2', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 1.0882107717575707e-15 NRMSE: 4.121229963103846e-16 MAPE: 5.6465111221784144e-12 Pearson Correlation: 0.01570729718339197 Spearman Correlation: 0.062023217247097855 Coefficient of Determination: -1.404829575362926 RMSE: 0.43493340165480093 NRMSE: 0.21486362797448952 MAPE: 1019.1700862166339 Predictor: ElasticNet Pearson Correlation: 0.7108847469337464 Spearman Correlation: 0.5561380755874632 Coefficient of Determination: 0.4169890952926175 RMSE: 0.17111336864057877 NRMSE: 0.06480339656905085 MAPE: 265.75606242139423 Pearson Correlation: 0.16111864075959967 Spearman Correlation: 0.23201638864501023 Coefficient of Determination: -0.03345588051180348 RMSE: 0.2851192761247734 NRMSE: 0.1408532015259004 MAPE: 198.1708431527657 Predictor: RandomForests Pearson Correlation: 0.6140297277995412 Spearman Correlation: 0.46951744719998045 Coefficient of Determination: 0.18890147758382048 RMSE: 0.20182846040383798 NRMSE: 0.07643569793745046 MAPE: 267.4194603902116 Pearson Correlation: 0.20929058177853768 Spearman Correlation: 0.3133298783706075 Coefficient of Determination: 4.845884331938777e-05 RMSE: 0.28045945540621964 NRMSE: 0.13855118015552562 MAPE: 110.77480099213537 Protein: CDH1 x_train_column_count: 1002 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'OR6C74', 'GYS2', 'IQCF6', 'IL13', 'ANKRD18DP', 'C10ORF53', 'LINC00469', 'LINC00696', 'LINC00895', 'CYP11B2', 'ADAM18', 'TCP10L2', 'C17ORF78', 'SNORA5B', 'FMO6P', 'PLET1', 'SCARNA11', 'LY6G6D', 'CGB5', 'POTEH', 'CLCA4', 'PLG', 'SST', 'TPD52L3', 'ZNF479', 'OR8B3', 'TMPRSS11F', 'TAAR9', 'OR2A2', 'F13B', 'SNORD89', 'OR1S2', 'OR5H14', 'ZCCHC13', 'OLAH', 'OPRD1', 'OR4D6', 'NOX3', 'LEUTX', 'VWC2L', 'EPS8L3', 'RPL13AP17', 'RAX2', 'DPPA5', 'KRTAP4-5', 'OR5T2', 'PRDM14', 'LOC285627', 'TKTL2', 'C18ORF42', 'OR10V1', 'OR2G2', 'OR8A1', 'SNORA71A', 'ZPBP', 'GPR78', 'FCAMR', 'BEND2', 'ACTRT2', 'TSGA13', 'SLC1A6', 'TTTY14', 'CST11', 'SSX5', 'STATH', 'CT45A1', 'OR5H6', 'IL26', 'LIPN', 'SPANXA2', 'OR6M1', 'ASB17', 'LINC01205', 'OR9G4', 'ACTR3BP2', 'SNORA74A', 'BARHL2', 'OR8D4', 'RTP2', 'LMNTD1', 'KLK9', 'OR4C12', 'LCNL1', 'TMEM202', 'OR11H4', 'OR2L8', 'GAGE2B', 'LOC145845', 'HNRNPCL1', 'KRTAP21-2', 'SERPINB3', 'DEFB110', 'KRT85', 'PWAR4', 'MYBPC2', 'LOC646813', 'C2ORF83', 'GPR52', 'PROP1', 'SSX8', 'LPO', 'NCOR1P1', 'SPATA31C1', 'ANKUB1', 'LINC00488', 'GOT1L1', 'OR2M4', 'LOC100129935', 'USP26', 'OR4C16', 'LINC00934', 'ZIM3', 'BPIFA3', 'DYDC1', 'FAM27B', 'COL6A4P1', 'TEX13B', 'CABS1', 'UGT2A3', 'OR4D9', 'FAM138D', 'ZAR1', 'FOXN3-AS2', 'POTED', 'CPLX4', 'SYCN', 'OR2M7', 'GSTA5', 'HIST1H4F', 'OR2T35', 'DUXA', 'SLC32A1', 'OR4K17', 'SLC38A8', 'TBC1D3P2', 'LINC00114', 'HTR3E', 'C3ORF30', 'KRTAP19-2', 'ASB18', 'CLRN2', 'RGS8', 'TMEM72', 'RBPJL', 'TRHR', 'HBD', 'CTRB1', 'B3GNT6', 'GABRG3', 'DAOA', 'WFDC8', 'DEFB104A', 'FRMPD4', 'LINC01565', 'KRTAP6-1', 'KRTAP25-1', 'HSFY2', 'EPPIN', 'LINC00608', 'OR56A1', 'OR6Y1', 'OR7A17', 'OR8H2', 'IL31', 'FBXW12', 'ALLC', 'OR4K2', 'OR4X2', 'GRIN2B', 'PRAMEF20', 'OR8G2', 'MYF5', 'LINC01566', 'KIR3DL3', 'MMD2', 'ITIH1', 'MAGEB3', 'ABRA', 'TCERG1L', 'OR8J3', 'CYLC2', 'SLC25A31', 'FAM169B', 'LINC00113', 'LOC729609', 'BMP15', 'FAM74A3', 'CFHR4', 'DEFB126', 'DEFB129', 'DEFB134', 'OR6B3', 'OR2AT4', 'FAM170B', 'INS', 'RHAG', 'CT47A1', 'CSNK1A1P1', 'OTOP1', 'GAGE12F', 'SRY', 'NKAIN3', 'PSKH2', 'MYH1', 'CCK', 'TCP10', 'SNORA70B', 'OR52H1', 'CD200R1L', 'OR5P3', 'REG4', 'POU6F2', 'TRPV5', 'KRTAP10-3', 'GPRC6A', 'ODF3', 'SPINK1', 'SCARNA8', 'FTHL17', 'ZNF705A', 'HOXC12', 'OR6B2', 'AQP2', 'KRTAP11-1', 'OR10H2', 'OR51I2', 'SNORA47', 'ACOT12', 'LCN9', 'DISC2', 'GUCY2EP', 'FGF6', 'TFF2', 'CHIAP2', 'CXADRP2', 'SNORA38B', 'C20ORF166-AS1', 'SNORD94', 'TMEM88B', 'OR4S1', 'OR5M10', 'MGC27382', 'MBD3L5', 'CNTN5', 'PYDC2', 'SNORA59B', 'ENAM', 'FIGLA', 'CCDC37', 'PCGEM1', 'PSG11', 'OR5AN1', 'OR6F1', 'OR14I1', 'SNORD115-26', 'LOC392196', 'SNCB', 'PISRT1', 'BOLL', 'OR7C2', 'SPATA19', 'TTTY8', 'TTTY9B', 'NANOS2', 'AVPR1B', 'XAGE3', 'CNGB1', 'MOGAT3', 'OR2T12', 'NLRP8', 'KRTAP10-7', 'MAGEA1', 'SLC51B', 'CYP2C18', 'CNTNAP4', 'UGT1A4', 'TAS2R60', 'OPN1MW', 'RESP18', 'RPL3L', 'OACYLP', 'IHH', 'LRRTM1', 'SLC17A6', 'MAGEB6', 'SNAR-F', 'MAGEA5', 'CLEC4G', 'PRAMEF1', 'PRDM9', 'SPDYC', 'SPRR2C', 'GRK1', 'KRTAP2-1', 'DNTT', 'KRTAP19-6', 'FOXR1', 'OR6K6', 'APCS', 'SFTPC', 'BSX', 'NEU2', 'PAQR9', 'OR5M3', 'KCNIP4-IT1', 'SLC6A5', 'MUSK', 'PAPOLB', 'CNGA2', 'IL17F', 'SLC2A2', 'GOLGA6L1', 'C10ORF120', 'ZFY', 'F9', 'CALR3', 'ANP32D', 'KRTAP10-12', 'C11ORF94', 'CA6', 'APOA2', 'CCDC166', 'HAO1', 'LINC00304', 'DEFB123', 'PPIAL4E', 'KGFLP1', 'SFTPB', 'LINC00575', 'OR5M8', 'ALX4', 'DKFZP434K028', 'EPB42', 'HCRTR1', 'SPANXN3', 'IZUMO1R', 'KRT3', 'OR4D11', 'KRTAP3-2', 'OR52R1', 'SSX9', 'LELP1', 'CRYGB', 'FTMT', 'OTOL1', 'AWAT1', 'OR7E24', 'LINC00410', 'LINC01553', 'BTN1A1', 'KRT25', 'PLA2G12B', 'KRTAP10-11', 'SCN1A', 'OR1K1', 'C16ORF90', 'ANXA10', 'KRTAP13-1', 'GABRR3', 'PROKR2', 'CELA2B', 'MT4', 'OR12D2', 'C12ORF77', 'COX7B2', 'ALPPL2', 'ZNF679', 'FKBP6', 'FOXD4L3', 'IQCJ', 'OR1E2', 'LGALS14', 'OR4D5', 'TMEM14E', 'PRR32', 'OR2T10', 'HBE1', 'NXNL1', 'PRB4', 'LOC286238', 'LINC01591', 'AADACL3', 'PRAMEF16', 'AGXT2', 'AKR1C8P', 'TMPRSS11BNL', 'SCTR', 'BANF2', 'BTF3P11', 'RPS4Y2', 'CDX4', 'SLC36A3', 'CHAT', 'OR4K5', 'OR10W1', 'MTNR1B', 'YIPF7', 'SPACA3', 'LYZL1', 'TNP1', 'EPGN', 'NEUROD1', 'KRTAP9-2', 'SVOP', 'SLC5A8', 'ANGPTL3', 'SPRR2E', 'OR2G6', 'INSC', 'OR51B5', 'NCAN', 'OR7D4', 'OR2M3', 'PLCZ1', 'SLC10A1', 'LINC01142', 'DAW1', 'OR6A2', 'AADAC', 'NKX2-3', 'TRIM49', 'ACSM2B', 'GBA3', 'ITPK1-AS1', 'OCSTAMP', 'BCYRN1', 'CETN1', 'HIST1H3B', 'SNORA16B', 'GKN2', 'EDDM3B', 'PCSK2', 'HIST1H4B', 'FAM170A', 'HULC', 'LOC647859', 'MCF2', 'RSPH6A', 'C1ORF141', 'C1ORF94', 'OR5B17', 'OR4D10', 'CTRC', 'KRTAP1-3', 'SLC9C1', 'PTH2', 'BET1P1', 'SHH', 'GPHA2', 'OR10AG1', 'C12ORF50', 'ZSCAN10', 'LHX3', 'OR10G8', 'PRAC1', 'PSG4', 'DEFB119', 'HS3ST4', 'PRG1', 'IL3', 'GUCY2F', 'DMRT1', 'LINC00520', 'OR1M1', 'OR1N1', 'OR1S1', 'NLRP13', 'UGT2B28', 'FAM47C', 'MMP23A', 'KRT71', 'TDRG1', 'FAM138B', 'NXPE1', 'FAM150A', 'AMER3', 'PCDH8', 'GCGR', 'NPSR1-AS1', 'ARL13A', 'DRD3', 'HSD52', 'TARM1', 'TCEB3C', 'LINC00202-2', 'SH2D7', 'IGFBP1', 'OR5E1P', 'OR2B3', 'OR5H2', 'SNORA27', 'SLCO6A1', 'CALCB', 'TMEM8C', 'GABRA4', 'SNORD15B', 'LINC00479', 'LOC284798', 'CHRNB3', 'HGC6.3', 'CCKAR', 'XKR7', 'ISL1', 'MRGPRG-AS1', 'CGB8', 'SNORA36B', 'LINC00523', 'MYH7', 'CGB2', 'GUCA1C', 'NEUROG3', 'PRSS57', 'FAM71B', 'VWA5B1', 'PROKR1', 'SLCO1B7', 'VGLL2', 'UBE2DNL', 'NKX6-2', 'PRKY', 'CACNG7', 'GH1', 'CCER1', 'PPP1R2P9', 'TRPM3', 'C7ORF72', 'IL36A', 'BPIFB4', 'UGT2B10', 'USP50', 'MTVR2', 'MUC13', 'LINC00032', 'FGF23', 'OR4K1', 'KRTAP12-2', 'OR52N2', 'DEFB118', 'KRTAP1-5', 'DEFB115', 'AIRE', 'RNF151', 'EXD1', 'FGF16', 'APOA5', 'PASD1', 'SNORA77', 'OR2A14', 'POU4F3', 'SYT14P1', 'HTR1A', 'FMO9P', 'SNORD97', 'ZFAT-AS1', 'B4GALNT2', 'OLFM3', 'HMSD', 'OR2B11', 'FOXE3', 'OR10K1', 'LINC00923', 'OR1L4', 'DSCR10', 'KDM5D', 'ANKRD34C', 'CHRNA9', 'DPRX', 'POU4F2', 'KRTAP3-3', 'MYADML', 'SFTA3', 'OR52K2', 'HCRTR2', 'PTCHD3', 'LINC00710', 'OR1L1', 'MEP1A', 'FAM9B', 'SNORA2B', 'MAGEA9B', 'KRTAP12-1', 'LINC00964', 'OTC', 'GPR148', 'MYH16', 'PACRG-AS1', 'C12ORF42', 'ITLN2', 'OTOR', 'SPATA3', 'OR10AD1', 'HIST1H3F', 'LOC100129055', 'PLD5', 'LOC100132831', 'FAM83A-AS1', 'ARID3C', 'IGLL1', 'C11ORF87', 'MYL1', 'LINC00052', 'OVCH1', 'NPSR1', 'CLEC18C', 'MIR1-1HG', 'TMSB4Y', 'POM121L2', 'HRK', 'CDH10', 'VIL1', 'CLEC4M', 'SNORA64', 'SLC39A12', 'VCX3A', 'CLRN1-AS1', 'OR51F2', 'CMTM5', 'PSG3', 'HTR4', 'HPVC1', 'OR2M2', 'LOC100130264', 'C4ORF50', 'SOX3', 'HIST2H2AB', 'C7ORF57', 'ATOH7', 'AATK-AS1', 'CPA2', 'SPINK14', 'FERD3L', 'TSNAX-DISC1', 'H3F3AP5', 'OR5AR1', 'KRTAP4-8', 'CYP2W1', 'C15ORF43', 'C20ORF144', 'NF1P2', 'KLK12', 'DEFB108B', 'IFNA21', 'OR13C3', 'PPP1R3A', 'PRSS48', 'ADGRG7', 'ADAMTS20', 'CACNG3', 'KRTAP10-1', 'SNORA68', 'MBL2', 'PGA4', 'CXCL6', 'SLC12A1', 'COL20A1', 'KRT18P55', 'PRKAG3', 'S100A7', 'KRT73', 'LINC01101', 'LOC100130417', 'CELP', 'SNORA44', 'CLCA3P', 'LRRC30', 'TMPRSS11B', 'KRTAP7-1', 'SCARNA1', 'XIRP2', 'MCHR2', 'MMP21', 'PTX4', 'FAM19A1', 'MGC16025', 'SLURP1', 'TBX20', 'CCDC54', 'FFAR1', 'KRTAP5-2', 'FER1L6', 'HSFY1P1', 'GSX2', 'PPY2P', 'HTR6', 'NEUROD6', 'NUTM1', 'C2ORF27B', 'HEATR9', 'OR2T2', 'SLC28A2', 'HTR2C', 'KCNJ13', 'LINC01548', 'MYL2', 'FEZF1', 'MYH4', 'TMPRSS7', 'TMEM212', 'LINC00691', 'PRO0611', 'BARHL1', 'LOC285629', 'PATE3', 'SNORA72', 'OR5M1', 'TSHB', 'HILS1', 'C1ORF140', 'RFPL1', 'SNORA61', 'CDH19', 'SNORA5C', 'LOC644669', 'NYAP2', 'CLRN1', 'SALL3', 'GRM7', 'GCKR', 'TPTE2', 'ADGRE3', 'LRRC52', 'LRRIQ4', 'WFDC6', 'KRT12', 'CAPZA3', 'FAM71E2', 'C14ORF178', 'ADH6', 'PRTN3', 'LRRC74A', 'OR12D3', 'FNDC9', 'C5ORF47', 'A1CF', 'OR10R2', 'ZIC5', 'C12ORF56', 'PAGE2', 'C9ORF171', 'FSHR', 'OPRM1', 'OR4F17', 'KAAG1', 'CTXN3', 'CTRB2', 'OR5K1', 'FRG2DP', 'CAPNS2', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 5.786599526416871e-15 NRMSE: 9.726521651987412e-16 MAPE: 4.0158904370794215e-12 Pearson Correlation: 0.3785310017282896 Spearman Correlation: 0.3287142717783631 Coefficient of Determination: -1.1765408713347414 RMSE: 1.7118105323762447 NRMSE: 0.27725219986010247 MAPE: 789.387544810749 Predictor: ElasticNet Pearson Correlation: 0.9240116151566721 Spearman Correlation: 0.8989635992742978 Coefficient of Determination: 0.8233179413385647 RMSE: 0.4743199886151476 NRMSE: 0.0797270247953789 MAPE: 210.17765115910572 Pearson Correlation: 0.5601453619187866 Spearman Correlation: 0.48880109257633403 Coefficient of Determination: 0.2888216292549307 RMSE: 0.9785016237808585 NRMSE: 0.1584823335461855 MAPE: 361.1524435624721 Predictor: RandomForests Pearson Correlation: 0.7416076430381736 Spearman Correlation: 0.664429855774446 Coefficient of Determination: 0.5451731120536603 RMSE: 0.7610238489690192 NRMSE: 0.1279182170959641 MAPE: 222.92655000171214 Pearson Correlation: 0.7445558059786131 Spearman Correlation: 0.7396205248268463 Coefficient of Determination: 0.5505154176558849 RMSE: 0.7779105843811813 NRMSE: 0.1259937456482105 MAPE: 126.15522531678454 Protein: CDH2 x_train_column_count: 1002 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'OR6C74', 'GYS2', 'IQCF6', 'IL13', 'ANKRD18DP', 'C10ORF53', 'LINC00469', 'LINC00696', 'LINC00895', 'CYP11B2', 'ADAM18', 'TCP10L2', 'C17ORF78', 'SNORA5B', 'FMO6P', 'PLET1', 'SCARNA11', 'LY6G6D', 'CGB5', 'POTEH', 'CLCA4', 'PLG', 'SST', 'TPD52L3', 'ZNF479', 'OR8B3', 'TMPRSS11F', 'TAAR9', 'OR2A2', 'F13B', 'SNORD89', 'OR1S2', 'OR5H14', 'ZCCHC13', 'OLAH', 'OPRD1', 'OR4D6', 'NOX3', 'LEUTX', 'VWC2L', 'EPS8L3', 'RPL13AP17', 'RAX2', 'DPPA5', 'KRTAP4-5', 'OR5T2', 'PRDM14', 'LOC285627', 'TKTL2', 'C18ORF42', 'OR10V1', 'OR2G2', 'OR8A1', 'SNORA71A', 'ZPBP', 'GPR78', 'FCAMR', 'BEND2', 'ACTRT2', 'TSGA13', 'SLC1A6', 'TTTY14', 'CST11', 'SSX5', 'STATH', 'CT45A1', 'OR5H6', 'IL26', 'LIPN', 'SPANXA2', 'OR6M1', 'ASB17', 'LINC01205', 'OR9G4', 'ACTR3BP2', 'SNORA74A', 'BARHL2', 'OR8D4', 'RTP2', 'LMNTD1', 'KLK9', 'OR4C12', 'LCNL1', 'TMEM202', 'OR11H4', 'OR2L8', 'GAGE2B', 'LOC145845', 'HNRNPCL1', 'KRTAP21-2', 'SERPINB3', 'DEFB110', 'KRT85', 'PWAR4', 'MYBPC2', 'LOC646813', 'C2ORF83', 'GPR52', 'PROP1', 'SSX8', 'LPO', 'NCOR1P1', 'SPATA31C1', 'ANKUB1', 'LINC00488', 'GOT1L1', 'OR2M4', 'LOC100129935', 'USP26', 'OR4C16', 'LINC00934', 'ZIM3', 'BPIFA3', 'DYDC1', 'FAM27B', 'COL6A4P1', 'TEX13B', 'CABS1', 'UGT2A3', 'OR4D9', 'FAM138D', 'ZAR1', 'FOXN3-AS2', 'POTED', 'CPLX4', 'SYCN', 'OR2M7', 'GSTA5', 'HIST1H4F', 'OR2T35', 'DUXA', 'SLC32A1', 'OR4K17', 'SLC38A8', 'TBC1D3P2', 'LINC00114', 'HTR3E', 'C3ORF30', 'KRTAP19-2', 'ASB18', 'CLRN2', 'RGS8', 'TMEM72', 'RBPJL', 'TRHR', 'HBD', 'CTRB1', 'B3GNT6', 'GABRG3', 'DAOA', 'WFDC8', 'DEFB104A', 'FRMPD4', 'LINC01565', 'KRTAP6-1', 'KRTAP25-1', 'HSFY2', 'EPPIN', 'LINC00608', 'OR56A1', 'OR6Y1', 'OR7A17', 'OR8H2', 'IL31', 'FBXW12', 'ALLC', 'OR4K2', 'OR4X2', 'GRIN2B', 'PRAMEF20', 'OR8G2', 'MYF5', 'LINC01566', 'KIR3DL3', 'MMD2', 'ITIH1', 'MAGEB3', 'ABRA', 'TCERG1L', 'OR8J3', 'CYLC2', 'SLC25A31', 'FAM169B', 'LINC00113', 'LOC729609', 'BMP15', 'FAM74A3', 'CFHR4', 'DEFB126', 'DEFB129', 'DEFB134', 'OR6B3', 'OR2AT4', 'FAM170B', 'INS', 'RHAG', 'CT47A1', 'CSNK1A1P1', 'OTOP1', 'GAGE12F', 'SRY', 'NKAIN3', 'PSKH2', 'MYH1', 'CCK', 'TCP10', 'SNORA70B', 'OR52H1', 'CD200R1L', 'OR5P3', 'REG4', 'POU6F2', 'TRPV5', 'KRTAP10-3', 'GPRC6A', 'ODF3', 'SPINK1', 'SCARNA8', 'FTHL17', 'ZNF705A', 'HOXC12', 'OR6B2', 'AQP2', 'KRTAP11-1', 'OR10H2', 'OR51I2', 'SNORA47', 'ACOT12', 'LCN9', 'DISC2', 'GUCY2EP', 'FGF6', 'TFF2', 'CHIAP2', 'CXADRP2', 'SNORA38B', 'C20ORF166-AS1', 'SNORD94', 'TMEM88B', 'OR4S1', 'OR5M10', 'MGC27382', 'MBD3L5', 'CNTN5', 'PYDC2', 'SNORA59B', 'ENAM', 'FIGLA', 'CCDC37', 'PCGEM1', 'PSG11', 'OR5AN1', 'OR6F1', 'OR14I1', 'SNORD115-26', 'LOC392196', 'SNCB', 'PISRT1', 'BOLL', 'OR7C2', 'SPATA19', 'TTTY8', 'TTTY9B', 'NANOS2', 'AVPR1B', 'XAGE3', 'CNGB1', 'MOGAT3', 'OR2T12', 'NLRP8', 'KRTAP10-7', 'MAGEA1', 'SLC51B', 'CYP2C18', 'CNTNAP4', 'UGT1A4', 'TAS2R60', 'OPN1MW', 'RESP18', 'RPL3L', 'OACYLP', 'IHH', 'LRRTM1', 'SLC17A6', 'MAGEB6', 'SNAR-F', 'MAGEA5', 'CLEC4G', 'PRAMEF1', 'PRDM9', 'SPDYC', 'SPRR2C', 'GRK1', 'KRTAP2-1', 'DNTT', 'KRTAP19-6', 'FOXR1', 'OR6K6', 'APCS', 'SFTPC', 'BSX', 'NEU2', 'PAQR9', 'OR5M3', 'KCNIP4-IT1', 'SLC6A5', 'MUSK', 'PAPOLB', 'CNGA2', 'IL17F', 'SLC2A2', 'GOLGA6L1', 'C10ORF120', 'ZFY', 'F9', 'CALR3', 'ANP32D', 'KRTAP10-12', 'C11ORF94', 'CA6', 'APOA2', 'CCDC166', 'HAO1', 'LINC00304', 'DEFB123', 'PPIAL4E', 'KGFLP1', 'SFTPB', 'LINC00575', 'OR5M8', 'ALX4', 'DKFZP434K028', 'EPB42', 'HCRTR1', 'SPANXN3', 'IZUMO1R', 'KRT3', 'OR4D11', 'KRTAP3-2', 'OR52R1', 'SSX9', 'LELP1', 'CRYGB', 'FTMT', 'OTOL1', 'AWAT1', 'OR7E24', 'LINC00410', 'LINC01553', 'BTN1A1', 'KRT25', 'PLA2G12B', 'KRTAP10-11', 'SCN1A', 'OR1K1', 'C16ORF90', 'ANXA10', 'KRTAP13-1', 'GABRR3', 'PROKR2', 'CELA2B', 'MT4', 'OR12D2', 'C12ORF77', 'COX7B2', 'ALPPL2', 'ZNF679', 'FKBP6', 'FOXD4L3', 'IQCJ', 'OR1E2', 'LGALS14', 'OR4D5', 'TMEM14E', 'PRR32', 'OR2T10', 'HBE1', 'NXNL1', 'PRB4', 'LOC286238', 'LINC01591', 'AADACL3', 'PRAMEF16', 'AGXT2', 'AKR1C8P', 'TMPRSS11BNL', 'SCTR', 'BANF2', 'BTF3P11', 'RPS4Y2', 'CDX4', 'SLC36A3', 'CHAT', 'OR4K5', 'OR10W1', 'MTNR1B', 'YIPF7', 'SPACA3', 'LYZL1', 'TNP1', 'EPGN', 'NEUROD1', 'KRTAP9-2', 'SVOP', 'SLC5A8', 'ANGPTL3', 'SPRR2E', 'OR2G6', 'INSC', 'OR51B5', 'NCAN', 'OR7D4', 'OR2M3', 'PLCZ1', 'SLC10A1', 'LINC01142', 'DAW1', 'OR6A2', 'AADAC', 'NKX2-3', 'TRIM49', 'ACSM2B', 'GBA3', 'ITPK1-AS1', 'OCSTAMP', 'BCYRN1', 'CETN1', 'HIST1H3B', 'SNORA16B', 'GKN2', 'EDDM3B', 'PCSK2', 'HIST1H4B', 'FAM170A', 'HULC', 'LOC647859', 'MCF2', 'RSPH6A', 'C1ORF141', 'C1ORF94', 'OR5B17', 'OR4D10', 'CTRC', 'KRTAP1-3', 'SLC9C1', 'PTH2', 'BET1P1', 'SHH', 'GPHA2', 'OR10AG1', 'C12ORF50', 'ZSCAN10', 'LHX3', 'OR10G8', 'PRAC1', 'PSG4', 'DEFB119', 'HS3ST4', 'PRG1', 'IL3', 'GUCY2F', 'DMRT1', 'LINC00520', 'OR1M1', 'OR1N1', 'OR1S1', 'NLRP13', 'UGT2B28', 'FAM47C', 'MMP23A', 'KRT71', 'TDRG1', 'FAM138B', 'NXPE1', 'FAM150A', 'AMER3', 'PCDH8', 'GCGR', 'NPSR1-AS1', 'ARL13A', 'DRD3', 'HSD52', 'TARM1', 'TCEB3C', 'LINC00202-2', 'SH2D7', 'IGFBP1', 'OR5E1P', 'OR2B3', 'OR5H2', 'SNORA27', 'SLCO6A1', 'CALCB', 'TMEM8C', 'GABRA4', 'SNORD15B', 'LINC00479', 'LOC284798', 'CHRNB3', 'HGC6.3', 'CCKAR', 'XKR7', 'ISL1', 'MRGPRG-AS1', 'CGB8', 'SNORA36B', 'LINC00523', 'MYH7', 'CGB2', 'GUCA1C', 'NEUROG3', 'PRSS57', 'FAM71B', 'VWA5B1', 'PROKR1', 'SLCO1B7', 'VGLL2', 'UBE2DNL', 'NKX6-2', 'PRKY', 'CACNG7', 'GH1', 'CCER1', 'PPP1R2P9', 'TRPM3', 'C7ORF72', 'IL36A', 'BPIFB4', 'UGT2B10', 'USP50', 'MTVR2', 'MUC13', 'LINC00032', 'FGF23', 'OR4K1', 'KRTAP12-2', 'OR52N2', 'DEFB118', 'KRTAP1-5', 'DEFB115', 'AIRE', 'RNF151', 'EXD1', 'FGF16', 'APOA5', 'PASD1', 'SNORA77', 'OR2A14', 'POU4F3', 'SYT14P1', 'HTR1A', 'FMO9P', 'SNORD97', 'ZFAT-AS1', 'B4GALNT2', 'OLFM3', 'HMSD', 'OR2B11', 'FOXE3', 'OR10K1', 'LINC00923', 'OR1L4', 'DSCR10', 'KDM5D', 'ANKRD34C', 'CHRNA9', 'DPRX', 'POU4F2', 'KRTAP3-3', 'MYADML', 'SFTA3', 'OR52K2', 'HCRTR2', 'PTCHD3', 'LINC00710', 'OR1L1', 'MEP1A', 'FAM9B', 'SNORA2B', 'MAGEA9B', 'KRTAP12-1', 'LINC00964', 'OTC', 'GPR148', 'MYH16', 'PACRG-AS1', 'C12ORF42', 'ITLN2', 'OTOR', 'SPATA3', 'OR10AD1', 'HIST1H3F', 'LOC100129055', 'PLD5', 'LOC100132831', 'FAM83A-AS1', 'ARID3C', 'IGLL1', 'C11ORF87', 'MYL1', 'LINC00052', 'OVCH1', 'NPSR1', 'CLEC18C', 'MIR1-1HG', 'TMSB4Y', 'POM121L2', 'HRK', 'CDH10', 'VIL1', 'CLEC4M', 'SNORA64', 'SLC39A12', 'VCX3A', 'CLRN1-AS1', 'OR51F2', 'CMTM5', 'PSG3', 'HTR4', 'HPVC1', 'OR2M2', 'LOC100130264', 'C4ORF50', 'SOX3', 'HIST2H2AB', 'C7ORF57', 'ATOH7', 'AATK-AS1', 'CPA2', 'SPINK14', 'FERD3L', 'TSNAX-DISC1', 'H3F3AP5', 'OR5AR1', 'KRTAP4-8', 'CYP2W1', 'C15ORF43', 'C20ORF144', 'NF1P2', 'KLK12', 'DEFB108B', 'IFNA21', 'OR13C3', 'PPP1R3A', 'PRSS48', 'ADGRG7', 'ADAMTS20', 'CACNG3', 'KRTAP10-1', 'SNORA68', 'MBL2', 'PGA4', 'CXCL6', 'SLC12A1', 'COL20A1', 'KRT18P55', 'PRKAG3', 'S100A7', 'KRT73', 'LINC01101', 'LOC100130417', 'CELP', 'SNORA44', 'CLCA3P', 'LRRC30', 'TMPRSS11B', 'KRTAP7-1', 'SCARNA1', 'XIRP2', 'MCHR2', 'MMP21', 'PTX4', 'FAM19A1', 'MGC16025', 'SLURP1', 'TBX20', 'CCDC54', 'FFAR1', 'KRTAP5-2', 'FER1L6', 'HSFY1P1', 'GSX2', 'PPY2P', 'HTR6', 'NEUROD6', 'NUTM1', 'C2ORF27B', 'HEATR9', 'OR2T2', 'SLC28A2', 'HTR2C', 'KCNJ13', 'LINC01548', 'MYL2', 'FEZF1', 'MYH4', 'TMPRSS7', 'TMEM212', 'LINC00691', 'PRO0611', 'BARHL1', 'LOC285629', 'PATE3', 'SNORA72', 'OR5M1', 'TSHB', 'HILS1', 'C1ORF140', 'RFPL1', 'SNORA61', 'CDH19', 'SNORA5C', 'LOC644669', 'NYAP2', 'CLRN1', 'SALL3', 'GRM7', 'GCKR', 'TPTE2', 'ADGRE3', 'LRRC52', 'LRRIQ4', 'WFDC6', 'KRT12', 'CAPZA3', 'FAM71E2', 'C14ORF178', 'ADH6', 'PRTN3', 'LRRC74A', 'OR12D3', 'FNDC9', 'C5ORF47', 'A1CF', 'OR10R2', 'ZIC5', 'C12ORF56', 'PAGE2', 'C9ORF171', 'FSHR', 'OPRM1', 'OR4F17', 'KAAG1', 'CTXN3', 'CTRB2', 'OR5K1', 'FRG2DP', 'CAPNS2', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999031343205 Coefficient of Determination: 1.0 RMSE: 1.876833138887619e-15 NRMSE: 6.933591708828348e-16 MAPE: 1.2731183161945136e-11 Pearson Correlation: 0.23813492305422732 Spearman Correlation: 0.25805775046336943 Coefficient of Determination: -1.2476122015521653 RMSE: 0.5623738399536978 NRMSE: 0.2902275068141084 MAPE: 420.17801601220344 Predictor: ElasticNet Pearson Correlation: 0.8150676495382704 Spearman Correlation: 0.7958955762352635 Coefficient of Determination: 0.5801100631940461 RMSE: 0.24052998382890323 NRMSE: 0.08885908219785332 MAPE: 1638.3595972705045 Pearson Correlation: 0.15724938837530997 Spearman Correlation: 0.1940005853087504 Coefficient of Determination: 0.00404287758315891 RMSE: 0.37435595041331793 NRMSE: 0.19319603159070958 MAPE: 139.87229355578665 Predictor: RandomForests Pearson Correlation: 0.5749314869061466 Spearman Correlation: 0.5054881868714205 Coefficient of Determination: 0.16460232575424638 RMSE: 0.33927207880947047 NRMSE: 0.12533741140485893 MAPE: 476.02985393067706 Pearson Correlation: 0.06526020697209875 Spearman Correlation: 0.12341235001463272 Coefficient of Determination: 0.0025929805403490658 RMSE: 0.37462834175194487 NRMSE: 0.19333660615778753 MAPE: 105.87005989575312 Protein: CDH3 x_train_column_count: 1002 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'OR6C74', 'GYS2', 'IQCF6', 'IL13', 'ANKRD18DP', 'C10ORF53', 'LINC00469', 'LINC00696', 'LINC00895', 'CYP11B2', 'ADAM18', 'TCP10L2', 'C17ORF78', 'SNORA5B', 'FMO6P', 'PLET1', 'SCARNA11', 'LY6G6D', 'CGB5', 'POTEH', 'CLCA4', 'PLG', 'SST', 'TPD52L3', 'ZNF479', 'OR8B3', 'TMPRSS11F', 'TAAR9', 'OR2A2', 'F13B', 'SNORD89', 'OR1S2', 'OR5H14', 'ZCCHC13', 'OLAH', 'OPRD1', 'OR4D6', 'NOX3', 'LEUTX', 'VWC2L', 'EPS8L3', 'RPL13AP17', 'RAX2', 'DPPA5', 'KRTAP4-5', 'OR5T2', 'PRDM14', 'LOC285627', 'TKTL2', 'C18ORF42', 'OR10V1', 'OR2G2', 'OR8A1', 'SNORA71A', 'ZPBP', 'GPR78', 'FCAMR', 'BEND2', 'ACTRT2', 'TSGA13', 'SLC1A6', 'TTTY14', 'CST11', 'SSX5', 'STATH', 'CT45A1', 'OR5H6', 'IL26', 'LIPN', 'SPANXA2', 'OR6M1', 'ASB17', 'LINC01205', 'OR9G4', 'ACTR3BP2', 'SNORA74A', 'BARHL2', 'OR8D4', 'RTP2', 'LMNTD1', 'KLK9', 'OR4C12', 'LCNL1', 'TMEM202', 'OR11H4', 'OR2L8', 'GAGE2B', 'LOC145845', 'HNRNPCL1', 'KRTAP21-2', 'SERPINB3', 'DEFB110', 'KRT85', 'PWAR4', 'MYBPC2', 'LOC646813', 'C2ORF83', 'GPR52', 'PROP1', 'SSX8', 'LPO', 'NCOR1P1', 'SPATA31C1', 'ANKUB1', 'LINC00488', 'GOT1L1', 'OR2M4', 'LOC100129935', 'USP26', 'OR4C16', 'LINC00934', 'ZIM3', 'BPIFA3', 'DYDC1', 'FAM27B', 'COL6A4P1', 'TEX13B', 'CABS1', 'UGT2A3', 'OR4D9', 'FAM138D', 'ZAR1', 'FOXN3-AS2', 'POTED', 'CPLX4', 'SYCN', 'OR2M7', 'GSTA5', 'HIST1H4F', 'OR2T35', 'DUXA', 'SLC32A1', 'OR4K17', 'SLC38A8', 'TBC1D3P2', 'LINC00114', 'HTR3E', 'C3ORF30', 'KRTAP19-2', 'ASB18', 'CLRN2', 'RGS8', 'TMEM72', 'RBPJL', 'TRHR', 'HBD', 'CTRB1', 'B3GNT6', 'GABRG3', 'DAOA', 'WFDC8', 'DEFB104A', 'FRMPD4', 'LINC01565', 'KRTAP6-1', 'KRTAP25-1', 'HSFY2', 'EPPIN', 'LINC00608', 'OR56A1', 'OR6Y1', 'OR7A17', 'OR8H2', 'IL31', 'FBXW12', 'ALLC', 'OR4K2', 'OR4X2', 'GRIN2B', 'PRAMEF20', 'OR8G2', 'MYF5', 'LINC01566', 'KIR3DL3', 'MMD2', 'ITIH1', 'MAGEB3', 'ABRA', 'TCERG1L', 'OR8J3', 'CYLC2', 'SLC25A31', 'FAM169B', 'LINC00113', 'LOC729609', 'BMP15', 'FAM74A3', 'CFHR4', 'DEFB126', 'DEFB129', 'DEFB134', 'OR6B3', 'OR2AT4', 'FAM170B', 'INS', 'RHAG', 'CT47A1', 'CSNK1A1P1', 'OTOP1', 'GAGE12F', 'SRY', 'NKAIN3', 'PSKH2', 'MYH1', 'CCK', 'TCP10', 'SNORA70B', 'OR52H1', 'CD200R1L', 'OR5P3', 'REG4', 'POU6F2', 'TRPV5', 'KRTAP10-3', 'GPRC6A', 'ODF3', 'SPINK1', 'SCARNA8', 'FTHL17', 'ZNF705A', 'HOXC12', 'OR6B2', 'AQP2', 'KRTAP11-1', 'OR10H2', 'OR51I2', 'SNORA47', 'ACOT12', 'LCN9', 'DISC2', 'GUCY2EP', 'FGF6', 'TFF2', 'CHIAP2', 'CXADRP2', 'SNORA38B', 'C20ORF166-AS1', 'SNORD94', 'TMEM88B', 'OR4S1', 'OR5M10', 'MGC27382', 'MBD3L5', 'CNTN5', 'PYDC2', 'SNORA59B', 'ENAM', 'FIGLA', 'CCDC37', 'PCGEM1', 'PSG11', 'OR5AN1', 'OR6F1', 'OR14I1', 'SNORD115-26', 'LOC392196', 'SNCB', 'PISRT1', 'BOLL', 'OR7C2', 'SPATA19', 'TTTY8', 'TTTY9B', 'NANOS2', 'AVPR1B', 'XAGE3', 'CNGB1', 'MOGAT3', 'OR2T12', 'NLRP8', 'KRTAP10-7', 'MAGEA1', 'SLC51B', 'CYP2C18', 'CNTNAP4', 'UGT1A4', 'TAS2R60', 'OPN1MW', 'RESP18', 'RPL3L', 'OACYLP', 'IHH', 'LRRTM1', 'SLC17A6', 'MAGEB6', 'SNAR-F', 'MAGEA5', 'CLEC4G', 'PRAMEF1', 'PRDM9', 'SPDYC', 'SPRR2C', 'GRK1', 'KRTAP2-1', 'DNTT', 'KRTAP19-6', 'FOXR1', 'OR6K6', 'APCS', 'SFTPC', 'BSX', 'NEU2', 'PAQR9', 'OR5M3', 'KCNIP4-IT1', 'SLC6A5', 'MUSK', 'PAPOLB', 'CNGA2', 'IL17F', 'SLC2A2', 'GOLGA6L1', 'C10ORF120', 'ZFY', 'F9', 'CALR3', 'ANP32D', 'KRTAP10-12', 'C11ORF94', 'CA6', 'APOA2', 'CCDC166', 'HAO1', 'LINC00304', 'DEFB123', 'PPIAL4E', 'KGFLP1', 'SFTPB', 'LINC00575', 'OR5M8', 'ALX4', 'DKFZP434K028', 'EPB42', 'HCRTR1', 'SPANXN3', 'IZUMO1R', 'KRT3', 'OR4D11', 'KRTAP3-2', 'OR52R1', 'SSX9', 'LELP1', 'CRYGB', 'FTMT', 'OTOL1', 'AWAT1', 'OR7E24', 'LINC00410', 'LINC01553', 'BTN1A1', 'KRT25', 'PLA2G12B', 'KRTAP10-11', 'SCN1A', 'OR1K1', 'C16ORF90', 'ANXA10', 'KRTAP13-1', 'GABRR3', 'PROKR2', 'CELA2B', 'MT4', 'OR12D2', 'C12ORF77', 'COX7B2', 'ALPPL2', 'ZNF679', 'FKBP6', 'FOXD4L3', 'IQCJ', 'OR1E2', 'LGALS14', 'OR4D5', 'TMEM14E', 'PRR32', 'OR2T10', 'HBE1', 'NXNL1', 'PRB4', 'LOC286238', 'LINC01591', 'AADACL3', 'PRAMEF16', 'AGXT2', 'AKR1C8P', 'TMPRSS11BNL', 'SCTR', 'BANF2', 'BTF3P11', 'RPS4Y2', 'CDX4', 'SLC36A3', 'CHAT', 'OR4K5', 'OR10W1', 'MTNR1B', 'YIPF7', 'SPACA3', 'LYZL1', 'TNP1', 'EPGN', 'NEUROD1', 'KRTAP9-2', 'SVOP', 'SLC5A8', 'ANGPTL3', 'SPRR2E', 'OR2G6', 'INSC', 'OR51B5', 'NCAN', 'OR7D4', 'OR2M3', 'PLCZ1', 'SLC10A1', 'LINC01142', 'DAW1', 'OR6A2', 'AADAC', 'NKX2-3', 'TRIM49', 'ACSM2B', 'GBA3', 'ITPK1-AS1', 'OCSTAMP', 'BCYRN1', 'CETN1', 'HIST1H3B', 'SNORA16B', 'GKN2', 'EDDM3B', 'PCSK2', 'HIST1H4B', 'FAM170A', 'HULC', 'LOC647859', 'MCF2', 'RSPH6A', 'C1ORF141', 'C1ORF94', 'OR5B17', 'OR4D10', 'CTRC', 'KRTAP1-3', 'SLC9C1', 'PTH2', 'BET1P1', 'SHH', 'GPHA2', 'OR10AG1', 'C12ORF50', 'ZSCAN10', 'LHX3', 'OR10G8', 'PRAC1', 'PSG4', 'DEFB119', 'HS3ST4', 'PRG1', 'IL3', 'GUCY2F', 'DMRT1', 'LINC00520', 'OR1M1', 'OR1N1', 'OR1S1', 'NLRP13', 'UGT2B28', 'FAM47C', 'MMP23A', 'KRT71', 'TDRG1', 'FAM138B', 'NXPE1', 'FAM150A', 'AMER3', 'PCDH8', 'GCGR', 'NPSR1-AS1', 'ARL13A', 'DRD3', 'HSD52', 'TARM1', 'TCEB3C', 'LINC00202-2', 'SH2D7', 'IGFBP1', 'OR5E1P', 'OR2B3', 'OR5H2', 'SNORA27', 'SLCO6A1', 'CALCB', 'TMEM8C', 'GABRA4', 'SNORD15B', 'LINC00479', 'LOC284798', 'CHRNB3', 'HGC6.3', 'CCKAR', 'XKR7', 'ISL1', 'MRGPRG-AS1', 'CGB8', 'SNORA36B', 'LINC00523', 'MYH7', 'CGB2', 'GUCA1C', 'NEUROG3', 'PRSS57', 'FAM71B', 'VWA5B1', 'PROKR1', 'SLCO1B7', 'VGLL2', 'UBE2DNL', 'NKX6-2', 'PRKY', 'CACNG7', 'GH1', 'CCER1', 'PPP1R2P9', 'TRPM3', 'C7ORF72', 'IL36A', 'BPIFB4', 'UGT2B10', 'USP50', 'MTVR2', 'MUC13', 'LINC00032', 'FGF23', 'OR4K1', 'KRTAP12-2', 'OR52N2', 'DEFB118', 'KRTAP1-5', 'DEFB115', 'AIRE', 'RNF151', 'EXD1', 'FGF16', 'APOA5', 'PASD1', 'SNORA77', 'OR2A14', 'POU4F3', 'SYT14P1', 'HTR1A', 'FMO9P', 'SNORD97', 'ZFAT-AS1', 'B4GALNT2', 'OLFM3', 'HMSD', 'OR2B11', 'FOXE3', 'OR10K1', 'LINC00923', 'OR1L4', 'DSCR10', 'KDM5D', 'ANKRD34C', 'CHRNA9', 'DPRX', 'POU4F2', 'KRTAP3-3', 'MYADML', 'SFTA3', 'OR52K2', 'HCRTR2', 'PTCHD3', 'LINC00710', 'OR1L1', 'MEP1A', 'FAM9B', 'SNORA2B', 'MAGEA9B', 'KRTAP12-1', 'LINC00964', 'OTC', 'GPR148', 'MYH16', 'PACRG-AS1', 'C12ORF42', 'ITLN2', 'OTOR', 'SPATA3', 'OR10AD1', 'HIST1H3F', 'LOC100129055', 'PLD5', 'LOC100132831', 'FAM83A-AS1', 'ARID3C', 'IGLL1', 'C11ORF87', 'MYL1', 'LINC00052', 'OVCH1', 'NPSR1', 'CLEC18C', 'MIR1-1HG', 'TMSB4Y', 'POM121L2', 'HRK', 'CDH10', 'VIL1', 'CLEC4M', 'SNORA64', 'SLC39A12', 'VCX3A', 'CLRN1-AS1', 'OR51F2', 'CMTM5', 'PSG3', 'HTR4', 'HPVC1', 'OR2M2', 'LOC100130264', 'C4ORF50', 'SOX3', 'HIST2H2AB', 'C7ORF57', 'ATOH7', 'AATK-AS1', 'CPA2', 'SPINK14', 'FERD3L', 'TSNAX-DISC1', 'H3F3AP5', 'OR5AR1', 'KRTAP4-8', 'CYP2W1', 'C15ORF43', 'C20ORF144', 'NF1P2', 'KLK12', 'DEFB108B', 'IFNA21', 'OR13C3', 'PPP1R3A', 'PRSS48', 'ADGRG7', 'ADAMTS20', 'CACNG3', 'KRTAP10-1', 'SNORA68', 'MBL2', 'PGA4', 'CXCL6', 'SLC12A1', 'COL20A1', 'KRT18P55', 'PRKAG3', 'S100A7', 'KRT73', 'LINC01101', 'LOC100130417', 'CELP', 'SNORA44', 'CLCA3P', 'LRRC30', 'TMPRSS11B', 'KRTAP7-1', 'SCARNA1', 'XIRP2', 'MCHR2', 'MMP21', 'PTX4', 'FAM19A1', 'MGC16025', 'SLURP1', 'TBX20', 'CCDC54', 'FFAR1', 'KRTAP5-2', 'FER1L6', 'HSFY1P1', 'GSX2', 'PPY2P', 'HTR6', 'NEUROD6', 'NUTM1', 'C2ORF27B', 'HEATR9', 'OR2T2', 'SLC28A2', 'HTR2C', 'KCNJ13', 'LINC01548', 'MYL2', 'FEZF1', 'MYH4', 'TMPRSS7', 'TMEM212', 'LINC00691', 'PRO0611', 'BARHL1', 'LOC285629', 'PATE3', 'SNORA72', 'OR5M1', 'TSHB', 'HILS1', 'C1ORF140', 'RFPL1', 'SNORA61', 'CDH19', 'SNORA5C', 'LOC644669', 'NYAP2', 'CLRN1', 'SALL3', 'GRM7', 'GCKR', 'TPTE2', 'ADGRE3', 'LRRC52', 'LRRIQ4', 'WFDC6', 'KRT12', 'CAPZA3', 'FAM71E2', 'C14ORF178', 'ADH6', 'PRTN3', 'LRRC74A', 'OR12D3', 'FNDC9', 'C5ORF47', 'A1CF', 'OR10R2', 'ZIC5', 'C12ORF56', 'PAGE2', 'C9ORF171', 'FSHR', 'OPRM1', 'OR4F17', 'KAAG1', 'CTXN3', 'CTRB2', 'OR5K1', 'FRG2DP', 'CAPNS2', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 9.03541990599831e-16 NRMSE: 6.339044105347639e-16 MAPE: 4.142866735614624e-12 Pearson Correlation: 0.07560182441667763 Spearman Correlation: 0.10438493805482393 Coefficient of Determination: -1.7462040132858676 RMSE: 0.33902220269425204 NRMSE: 0.2594868793153149 MAPE: 1076.2727570024008 Predictor: ElasticNet Pearson Correlation: 0.7084995949208842 Spearman Correlation: 0.6776752183366882 Coefficient of Determination: 0.4259033408176017 RMSE: 0.15820584739250862 NRMSE: 0.11099360680284884 MAPE: 325.59431748013054 Pearson Correlation: 0.3364655975721403 Spearman Correlation: 0.4039752219295679 Coefficient of Determination: 0.11151659866486985 RMSE: 0.1928352396307324 NRMSE: 0.1475956859348435 MAPE: 414.23383493665693 Predictor: RandomForests Pearson Correlation: 0.6063443243872141 Spearman Correlation: 0.5803816279055756 Coefficient of Determination: 0.25419074828565436 RMSE: 0.18032000248793076 NRMSE: 0.12650839260813462 MAPE: 250.89026806021647 Pearson Correlation: 0.4679636046051671 Spearman Correlation: 0.5368207979709297 Coefficient of Determination: 0.17613946617836929 RMSE: 0.18569003238655593 NRMSE: 0.1421267593715746 MAPE: 334.5285314056732 Protein: PTEN x_train_column_count: 1002 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'OR6C74', 'GYS2', 'IQCF6', 'IL13', 'ANKRD18DP', 'C10ORF53', 'LINC00469', 'LINC00696', 'LINC00895', 'CYP11B2', 'ADAM18', 'TCP10L2', 'C17ORF78', 'SNORA5B', 'FMO6P', 'PLET1', 'SCARNA11', 'LY6G6D', 'CGB5', 'POTEH', 'CLCA4', 'PLG', 'SST', 'TPD52L3', 'ZNF479', 'OR8B3', 'TMPRSS11F', 'TAAR9', 'OR2A2', 'F13B', 'SNORD89', 'OR1S2', 'OR5H14', 'ZCCHC13', 'OLAH', 'OPRD1', 'OR4D6', 'NOX3', 'LEUTX', 'VWC2L', 'EPS8L3', 'RPL13AP17', 'RAX2', 'DPPA5', 'KRTAP4-5', 'OR5T2', 'PRDM14', 'LOC285627', 'TKTL2', 'C18ORF42', 'OR10V1', 'OR2G2', 'OR8A1', 'SNORA71A', 'ZPBP', 'GPR78', 'FCAMR', 'BEND2', 'ACTRT2', 'TSGA13', 'SLC1A6', 'TTTY14', 'CST11', 'SSX5', 'STATH', 'CT45A1', 'OR5H6', 'IL26', 'LIPN', 'SPANXA2', 'OR6M1', 'ASB17', 'LINC01205', 'OR9G4', 'ACTR3BP2', 'SNORA74A', 'BARHL2', 'OR8D4', 'RTP2', 'LMNTD1', 'KLK9', 'OR4C12', 'LCNL1', 'TMEM202', 'OR11H4', 'OR2L8', 'GAGE2B', 'LOC145845', 'HNRNPCL1', 'KRTAP21-2', 'SERPINB3', 'DEFB110', 'KRT85', 'PWAR4', 'MYBPC2', 'LOC646813', 'C2ORF83', 'GPR52', 'PROP1', 'SSX8', 'LPO', 'NCOR1P1', 'SPATA31C1', 'ANKUB1', 'LINC00488', 'GOT1L1', 'OR2M4', 'LOC100129935', 'USP26', 'OR4C16', 'LINC00934', 'ZIM3', 'BPIFA3', 'DYDC1', 'FAM27B', 'COL6A4P1', 'TEX13B', 'CABS1', 'UGT2A3', 'OR4D9', 'FAM138D', 'ZAR1', 'FOXN3-AS2', 'POTED', 'CPLX4', 'SYCN', 'OR2M7', 'GSTA5', 'HIST1H4F', 'OR2T35', 'DUXA', 'SLC32A1', 'OR4K17', 'SLC38A8', 'TBC1D3P2', 'LINC00114', 'HTR3E', 'C3ORF30', 'KRTAP19-2', 'ASB18', 'CLRN2', 'RGS8', 'TMEM72', 'RBPJL', 'TRHR', 'HBD', 'CTRB1', 'B3GNT6', 'GABRG3', 'DAOA', 'WFDC8', 'DEFB104A', 'FRMPD4', 'LINC01565', 'KRTAP6-1', 'KRTAP25-1', 'HSFY2', 'EPPIN', 'LINC00608', 'OR56A1', 'OR6Y1', 'OR7A17', 'OR8H2', 'IL31', 'FBXW12', 'ALLC', 'OR4K2', 'OR4X2', 'GRIN2B', 'PRAMEF20', 'OR8G2', 'MYF5', 'LINC01566', 'KIR3DL3', 'MMD2', 'ITIH1', 'MAGEB3', 'ABRA', 'TCERG1L', 'OR8J3', 'CYLC2', 'SLC25A31', 'FAM169B', 'LINC00113', 'LOC729609', 'BMP15', 'FAM74A3', 'CFHR4', 'DEFB126', 'DEFB129', 'DEFB134', 'OR6B3', 'OR2AT4', 'FAM170B', 'INS', 'RHAG', 'CT47A1', 'CSNK1A1P1', 'OTOP1', 'GAGE12F', 'SRY', 'NKAIN3', 'PSKH2', 'MYH1', 'CCK', 'TCP10', 'SNORA70B', 'OR52H1', 'CD200R1L', 'OR5P3', 'REG4', 'POU6F2', 'TRPV5', 'KRTAP10-3', 'GPRC6A', 'ODF3', 'SPINK1', 'SCARNA8', 'FTHL17', 'ZNF705A', 'HOXC12', 'OR6B2', 'AQP2', 'KRTAP11-1', 'OR10H2', 'OR51I2', 'SNORA47', 'ACOT12', 'LCN9', 'DISC2', 'GUCY2EP', 'FGF6', 'TFF2', 'CHIAP2', 'CXADRP2', 'SNORA38B', 'C20ORF166-AS1', 'SNORD94', 'TMEM88B', 'OR4S1', 'OR5M10', 'MGC27382', 'MBD3L5', 'CNTN5', 'PYDC2', 'SNORA59B', 'ENAM', 'FIGLA', 'CCDC37', 'PCGEM1', 'PSG11', 'OR5AN1', 'OR6F1', 'OR14I1', 'SNORD115-26', 'LOC392196', 'SNCB', 'PISRT1', 'BOLL', 'OR7C2', 'SPATA19', 'TTTY8', 'TTTY9B', 'NANOS2', 'AVPR1B', 'XAGE3', 'CNGB1', 'MOGAT3', 'OR2T12', 'NLRP8', 'KRTAP10-7', 'MAGEA1', 'SLC51B', 'CYP2C18', 'CNTNAP4', 'UGT1A4', 'TAS2R60', 'OPN1MW', 'RESP18', 'RPL3L', 'OACYLP', 'IHH', 'LRRTM1', 'SLC17A6', 'MAGEB6', 'SNAR-F', 'MAGEA5', 'CLEC4G', 'PRAMEF1', 'PRDM9', 'SPDYC', 'SPRR2C', 'GRK1', 'KRTAP2-1', 'DNTT', 'KRTAP19-6', 'FOXR1', 'OR6K6', 'APCS', 'SFTPC', 'BSX', 'NEU2', 'PAQR9', 'OR5M3', 'KCNIP4-IT1', 'SLC6A5', 'MUSK', 'PAPOLB', 'CNGA2', 'IL17F', 'SLC2A2', 'GOLGA6L1', 'C10ORF120', 'ZFY', 'F9', 'CALR3', 'ANP32D', 'KRTAP10-12', 'C11ORF94', 'CA6', 'APOA2', 'CCDC166', 'HAO1', 'LINC00304', 'DEFB123', 'PPIAL4E', 'KGFLP1', 'SFTPB', 'LINC00575', 'OR5M8', 'ALX4', 'DKFZP434K028', 'EPB42', 'HCRTR1', 'SPANXN3', 'IZUMO1R', 'KRT3', 'OR4D11', 'KRTAP3-2', 'OR52R1', 'SSX9', 'LELP1', 'CRYGB', 'FTMT', 'OTOL1', 'AWAT1', 'OR7E24', 'LINC00410', 'LINC01553', 'BTN1A1', 'KRT25', 'PLA2G12B', 'KRTAP10-11', 'SCN1A', 'OR1K1', 'C16ORF90', 'ANXA10', 'KRTAP13-1', 'GABRR3', 'PROKR2', 'CELA2B', 'MT4', 'OR12D2', 'C12ORF77', 'COX7B2', 'ALPPL2', 'ZNF679', 'FKBP6', 'FOXD4L3', 'IQCJ', 'OR1E2', 'LGALS14', 'OR4D5', 'TMEM14E', 'PRR32', 'OR2T10', 'HBE1', 'NXNL1', 'PRB4', 'LOC286238', 'LINC01591', 'AADACL3', 'PRAMEF16', 'AGXT2', 'AKR1C8P', 'TMPRSS11BNL', 'SCTR', 'BANF2', 'BTF3P11', 'RPS4Y2', 'CDX4', 'SLC36A3', 'CHAT', 'OR4K5', 'OR10W1', 'MTNR1B', 'YIPF7', 'SPACA3', 'LYZL1', 'TNP1', 'EPGN', 'NEUROD1', 'KRTAP9-2', 'SVOP', 'SLC5A8', 'ANGPTL3', 'SPRR2E', 'OR2G6', 'INSC', 'OR51B5', 'NCAN', 'OR7D4', 'OR2M3', 'PLCZ1', 'SLC10A1', 'LINC01142', 'DAW1', 'OR6A2', 'AADAC', 'NKX2-3', 'TRIM49', 'ACSM2B', 'GBA3', 'ITPK1-AS1', 'OCSTAMP', 'BCYRN1', 'CETN1', 'HIST1H3B', 'SNORA16B', 'GKN2', 'EDDM3B', 'PCSK2', 'HIST1H4B', 'FAM170A', 'HULC', 'LOC647859', 'MCF2', 'RSPH6A', 'C1ORF141', 'C1ORF94', 'OR5B17', 'OR4D10', 'CTRC', 'KRTAP1-3', 'SLC9C1', 'PTH2', 'BET1P1', 'SHH', 'GPHA2', 'OR10AG1', 'C12ORF50', 'ZSCAN10', 'LHX3', 'OR10G8', 'PRAC1', 'PSG4', 'DEFB119', 'HS3ST4', 'PRG1', 'IL3', 'GUCY2F', 'DMRT1', 'LINC00520', 'OR1M1', 'OR1N1', 'OR1S1', 'NLRP13', 'UGT2B28', 'FAM47C', 'MMP23A', 'KRT71', 'TDRG1', 'FAM138B', 'NXPE1', 'FAM150A', 'AMER3', 'PCDH8', 'GCGR', 'NPSR1-AS1', 'ARL13A', 'DRD3', 'HSD52', 'TARM1', 'TCEB3C', 'LINC00202-2', 'SH2D7', 'IGFBP1', 'OR5E1P', 'OR2B3', 'OR5H2', 'SNORA27', 'SLCO6A1', 'CALCB', 'TMEM8C', 'GABRA4', 'SNORD15B', 'LINC00479', 'LOC284798', 'CHRNB3', 'HGC6.3', 'CCKAR', 'XKR7', 'ISL1', 'MRGPRG-AS1', 'CGB8', 'SNORA36B', 'LINC00523', 'MYH7', 'CGB2', 'GUCA1C', 'NEUROG3', 'PRSS57', 'FAM71B', 'VWA5B1', 'PROKR1', 'SLCO1B7', 'VGLL2', 'UBE2DNL', 'NKX6-2', 'PRKY', 'CACNG7', 'GH1', 'CCER1', 'PPP1R2P9', 'TRPM3', 'C7ORF72', 'IL36A', 'BPIFB4', 'UGT2B10', 'USP50', 'MTVR2', 'MUC13', 'LINC00032', 'FGF23', 'OR4K1', 'KRTAP12-2', 'OR52N2', 'DEFB118', 'KRTAP1-5', 'DEFB115', 'AIRE', 'RNF151', 'EXD1', 'FGF16', 'APOA5', 'PASD1', 'SNORA77', 'OR2A14', 'POU4F3', 'SYT14P1', 'HTR1A', 'FMO9P', 'SNORD97', 'ZFAT-AS1', 'B4GALNT2', 'OLFM3', 'HMSD', 'OR2B11', 'FOXE3', 'OR10K1', 'LINC00923', 'OR1L4', 'DSCR10', 'KDM5D', 'ANKRD34C', 'CHRNA9', 'DPRX', 'POU4F2', 'KRTAP3-3', 'MYADML', 'SFTA3', 'OR52K2', 'HCRTR2', 'PTCHD3', 'LINC00710', 'OR1L1', 'MEP1A', 'FAM9B', 'SNORA2B', 'MAGEA9B', 'KRTAP12-1', 'LINC00964', 'OTC', 'GPR148', 'MYH16', 'PACRG-AS1', 'C12ORF42', 'ITLN2', 'OTOR', 'SPATA3', 'OR10AD1', 'HIST1H3F', 'LOC100129055', 'PLD5', 'LOC100132831', 'FAM83A-AS1', 'ARID3C', 'IGLL1', 'C11ORF87', 'MYL1', 'LINC00052', 'OVCH1', 'NPSR1', 'CLEC18C', 'MIR1-1HG', 'TMSB4Y', 'POM121L2', 'HRK', 'CDH10', 'VIL1', 'CLEC4M', 'SNORA64', 'SLC39A12', 'VCX3A', 'CLRN1-AS1', 'OR51F2', 'CMTM5', 'PSG3', 'HTR4', 'HPVC1', 'OR2M2', 'LOC100130264', 'C4ORF50', 'SOX3', 'HIST2H2AB', 'C7ORF57', 'ATOH7', 'AATK-AS1', 'CPA2', 'SPINK14', 'FERD3L', 'TSNAX-DISC1', 'H3F3AP5', 'OR5AR1', 'KRTAP4-8', 'CYP2W1', 'C15ORF43', 'C20ORF144', 'NF1P2', 'KLK12', 'DEFB108B', 'IFNA21', 'OR13C3', 'PPP1R3A', 'PRSS48', 'ADGRG7', 'ADAMTS20', 'CACNG3', 'KRTAP10-1', 'SNORA68', 'MBL2', 'PGA4', 'CXCL6', 'SLC12A1', 'COL20A1', 'KRT18P55', 'PRKAG3', 'S100A7', 'KRT73', 'LINC01101', 'LOC100130417', 'CELP', 'SNORA44', 'CLCA3P', 'LRRC30', 'TMPRSS11B', 'KRTAP7-1', 'SCARNA1', 'XIRP2', 'MCHR2', 'MMP21', 'PTX4', 'FAM19A1', 'MGC16025', 'SLURP1', 'TBX20', 'CCDC54', 'FFAR1', 'KRTAP5-2', 'FER1L6', 'HSFY1P1', 'GSX2', 'PPY2P', 'HTR6', 'NEUROD6', 'NUTM1', 'C2ORF27B', 'HEATR9', 'OR2T2', 'SLC28A2', 'HTR2C', 'KCNJ13', 'LINC01548', 'MYL2', 'FEZF1', 'MYH4', 'TMPRSS7', 'TMEM212', 'LINC00691', 'PRO0611', 'BARHL1', 'LOC285629', 'PATE3', 'SNORA72', 'OR5M1', 'TSHB', 'HILS1', 'C1ORF140', 'RFPL1', 'SNORA61', 'CDH19', 'SNORA5C', 'LOC644669', 'NYAP2', 'CLRN1', 'SALL3', 'GRM7', 'GCKR', 'TPTE2', 'ADGRE3', 'LRRC52', 'LRRIQ4', 'WFDC6', 'KRT12', 'CAPZA3', 'FAM71E2', 'C14ORF178', 'ADH6', 'PRTN3', 'LRRC74A', 'OR12D3', 'FNDC9', 'C5ORF47', 'A1CF', 'OR10R2', 'ZIC5', 'C12ORF56', 'PAGE2', 'C9ORF171', 'FSHR', 'OPRM1', 'OR4F17', 'KAAG1', 'CTXN3', 'CTRB2', 'OR5K1', 'FRG2DP', 'CAPNS2', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 2.5742552985558676e-15 NRMSE: 4.0251040552824136e-16 MAPE: 5.979825875732374e-12 Pearson Correlation: 0.1171366700301612 Spearman Correlation: 0.13452346112574384 Coefficient of Determination: -3.274412285701036 RMSE: 1.0268403656775567 NRMSE: 0.338422109840339 MAPE: 768.1875129824718 Predictor: ElasticNet Pearson Correlation: 0.8797024346989111 Spearman Correlation: 0.8514124720213183 Coefficient of Determination: 0.7216598521660552 RMSE: 0.33051491608820954 NRMSE: 0.05167929264142124 MAPE: 251.0738707279638 Pearson Correlation: 0.16120742615508932 Spearman Correlation: 0.23507462686567165 Coefficient of Determination: -0.24232633120360925 RMSE: 0.553582781010027 NRMSE: 0.1824476900039638 MAPE: 243.8511010053379 Predictor: RandomForests Pearson Correlation: 0.559315674110717 Spearman Correlation: 0.5666788058991487 Coefficient of Determination: 0.27754839330522696 RMSE: 0.5324851709926139 NRMSE: 0.08325934969785223 MAPE: 324.9041630904922 Pearson Correlation: 0.34592416363720985 Spearman Correlation: 0.3876069569557588 Coefficient of Determination: 0.11614438756353629 RMSE: 0.46693388341044245 NRMSE: 0.1538902786271315 MAPE: 186.80439452294465 Protein: BRCA2 x_train_column_count: 1002 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'OR6C74', 'GYS2', 'IQCF6', 'IL13', 'ANKRD18DP', 'C10ORF53', 'LINC00469', 'LINC00696', 'LINC00895', 'CYP11B2', 'ADAM18', 'TCP10L2', 'C17ORF78', 'SNORA5B', 'FMO6P', 'PLET1', 'SCARNA11', 'LY6G6D', 'CGB5', 'POTEH', 'CLCA4', 'PLG', 'SST', 'TPD52L3', 'ZNF479', 'OR8B3', 'TMPRSS11F', 'TAAR9', 'OR2A2', 'F13B', 'SNORD89', 'OR1S2', 'OR5H14', 'ZCCHC13', 'OLAH', 'OPRD1', 'OR4D6', 'NOX3', 'LEUTX', 'VWC2L', 'EPS8L3', 'RPL13AP17', 'RAX2', 'DPPA5', 'KRTAP4-5', 'OR5T2', 'PRDM14', 'LOC285627', 'TKTL2', 'C18ORF42', 'OR10V1', 'OR2G2', 'OR8A1', 'SNORA71A', 'ZPBP', 'GPR78', 'FCAMR', 'BEND2', 'ACTRT2', 'TSGA13', 'SLC1A6', 'TTTY14', 'CST11', 'SSX5', 'STATH', 'CT45A1', 'OR5H6', 'IL26', 'LIPN', 'SPANXA2', 'OR6M1', 'ASB17', 'LINC01205', 'OR9G4', 'ACTR3BP2', 'SNORA74A', 'BARHL2', 'OR8D4', 'RTP2', 'LMNTD1', 'KLK9', 'OR4C12', 'LCNL1', 'TMEM202', 'OR11H4', 'OR2L8', 'GAGE2B', 'LOC145845', 'HNRNPCL1', 'KRTAP21-2', 'SERPINB3', 'DEFB110', 'KRT85', 'PWAR4', 'MYBPC2', 'LOC646813', 'C2ORF83', 'GPR52', 'PROP1', 'SSX8', 'LPO', 'NCOR1P1', 'SPATA31C1', 'ANKUB1', 'LINC00488', 'GOT1L1', 'OR2M4', 'LOC100129935', 'USP26', 'OR4C16', 'LINC00934', 'ZIM3', 'BPIFA3', 'DYDC1', 'FAM27B', 'COL6A4P1', 'TEX13B', 'CABS1', 'UGT2A3', 'OR4D9', 'FAM138D', 'ZAR1', 'FOXN3-AS2', 'POTED', 'CPLX4', 'SYCN', 'OR2M7', 'GSTA5', 'HIST1H4F', 'OR2T35', 'DUXA', 'SLC32A1', 'OR4K17', 'SLC38A8', 'TBC1D3P2', 'LINC00114', 'HTR3E', 'C3ORF30', 'KRTAP19-2', 'ASB18', 'CLRN2', 'RGS8', 'TMEM72', 'RBPJL', 'TRHR', 'HBD', 'CTRB1', 'B3GNT6', 'GABRG3', 'DAOA', 'WFDC8', 'DEFB104A', 'FRMPD4', 'LINC01565', 'KRTAP6-1', 'KRTAP25-1', 'HSFY2', 'EPPIN', 'LINC00608', 'OR56A1', 'OR6Y1', 'OR7A17', 'OR8H2', 'IL31', 'FBXW12', 'ALLC', 'OR4K2', 'OR4X2', 'GRIN2B', 'PRAMEF20', 'OR8G2', 'MYF5', 'LINC01566', 'KIR3DL3', 'MMD2', 'ITIH1', 'MAGEB3', 'ABRA', 'TCERG1L', 'OR8J3', 'CYLC2', 'SLC25A31', 'FAM169B', 'LINC00113', 'LOC729609', 'BMP15', 'FAM74A3', 'CFHR4', 'DEFB126', 'DEFB129', 'DEFB134', 'OR6B3', 'OR2AT4', 'FAM170B', 'INS', 'RHAG', 'CT47A1', 'CSNK1A1P1', 'OTOP1', 'GAGE12F', 'SRY', 'NKAIN3', 'PSKH2', 'MYH1', 'CCK', 'TCP10', 'SNORA70B', 'OR52H1', 'CD200R1L', 'OR5P3', 'REG4', 'POU6F2', 'TRPV5', 'KRTAP10-3', 'GPRC6A', 'ODF3', 'SPINK1', 'SCARNA8', 'FTHL17', 'ZNF705A', 'HOXC12', 'OR6B2', 'AQP2', 'KRTAP11-1', 'OR10H2', 'OR51I2', 'SNORA47', 'ACOT12', 'LCN9', 'DISC2', 'GUCY2EP', 'FGF6', 'TFF2', 'CHIAP2', 'CXADRP2', 'SNORA38B', 'C20ORF166-AS1', 'SNORD94', 'TMEM88B', 'OR4S1', 'OR5M10', 'MGC27382', 'MBD3L5', 'CNTN5', 'PYDC2', 'SNORA59B', 'ENAM', 'FIGLA', 'CCDC37', 'PCGEM1', 'PSG11', 'OR5AN1', 'OR6F1', 'OR14I1', 'SNORD115-26', 'LOC392196', 'SNCB', 'PISRT1', 'BOLL', 'OR7C2', 'SPATA19', 'TTTY8', 'TTTY9B', 'NANOS2', 'AVPR1B', 'XAGE3', 'CNGB1', 'MOGAT3', 'OR2T12', 'NLRP8', 'KRTAP10-7', 'MAGEA1', 'SLC51B', 'CYP2C18', 'CNTNAP4', 'UGT1A4', 'TAS2R60', 'OPN1MW', 'RESP18', 'RPL3L', 'OACYLP', 'IHH', 'LRRTM1', 'SLC17A6', 'MAGEB6', 'SNAR-F', 'MAGEA5', 'CLEC4G', 'PRAMEF1', 'PRDM9', 'SPDYC', 'SPRR2C', 'GRK1', 'KRTAP2-1', 'DNTT', 'KRTAP19-6', 'FOXR1', 'OR6K6', 'APCS', 'SFTPC', 'BSX', 'NEU2', 'PAQR9', 'OR5M3', 'KCNIP4-IT1', 'SLC6A5', 'MUSK', 'PAPOLB', 'CNGA2', 'IL17F', 'SLC2A2', 'GOLGA6L1', 'C10ORF120', 'ZFY', 'F9', 'CALR3', 'ANP32D', 'KRTAP10-12', 'C11ORF94', 'CA6', 'APOA2', 'CCDC166', 'HAO1', 'LINC00304', 'DEFB123', 'PPIAL4E', 'KGFLP1', 'SFTPB', 'LINC00575', 'OR5M8', 'ALX4', 'DKFZP434K028', 'EPB42', 'HCRTR1', 'SPANXN3', 'IZUMO1R', 'KRT3', 'OR4D11', 'KRTAP3-2', 'OR52R1', 'SSX9', 'LELP1', 'CRYGB', 'FTMT', 'OTOL1', 'AWAT1', 'OR7E24', 'LINC00410', 'LINC01553', 'BTN1A1', 'KRT25', 'PLA2G12B', 'KRTAP10-11', 'SCN1A', 'OR1K1', 'C16ORF90', 'ANXA10', 'KRTAP13-1', 'GABRR3', 'PROKR2', 'CELA2B', 'MT4', 'OR12D2', 'C12ORF77', 'COX7B2', 'ALPPL2', 'ZNF679', 'FKBP6', 'FOXD4L3', 'IQCJ', 'OR1E2', 'LGALS14', 'OR4D5', 'TMEM14E', 'PRR32', 'OR2T10', 'HBE1', 'NXNL1', 'PRB4', 'LOC286238', 'LINC01591', 'AADACL3', 'PRAMEF16', 'AGXT2', 'AKR1C8P', 'TMPRSS11BNL', 'SCTR', 'BANF2', 'BTF3P11', 'RPS4Y2', 'CDX4', 'SLC36A3', 'CHAT', 'OR4K5', 'OR10W1', 'MTNR1B', 'YIPF7', 'SPACA3', 'LYZL1', 'TNP1', 'EPGN', 'NEUROD1', 'KRTAP9-2', 'SVOP', 'SLC5A8', 'ANGPTL3', 'SPRR2E', 'OR2G6', 'INSC', 'OR51B5', 'NCAN', 'OR7D4', 'OR2M3', 'PLCZ1', 'SLC10A1', 'LINC01142', 'DAW1', 'OR6A2', 'AADAC', 'NKX2-3', 'TRIM49', 'ACSM2B', 'GBA3', 'ITPK1-AS1', 'OCSTAMP', 'BCYRN1', 'CETN1', 'HIST1H3B', 'SNORA16B', 'GKN2', 'EDDM3B', 'PCSK2', 'HIST1H4B', 'FAM170A', 'HULC', 'LOC647859', 'MCF2', 'RSPH6A', 'C1ORF141', 'C1ORF94', 'OR5B17', 'OR4D10', 'CTRC', 'KRTAP1-3', 'SLC9C1', 'PTH2', 'BET1P1', 'SHH', 'GPHA2', 'OR10AG1', 'C12ORF50', 'ZSCAN10', 'LHX3', 'OR10G8', 'PRAC1', 'PSG4', 'DEFB119', 'HS3ST4', 'PRG1', 'IL3', 'GUCY2F', 'DMRT1', 'LINC00520', 'OR1M1', 'OR1N1', 'OR1S1', 'NLRP13', 'UGT2B28', 'FAM47C', 'MMP23A', 'KRT71', 'TDRG1', 'FAM138B', 'NXPE1', 'FAM150A', 'AMER3', 'PCDH8', 'GCGR', 'NPSR1-AS1', 'ARL13A', 'DRD3', 'HSD52', 'TARM1', 'TCEB3C', 'LINC00202-2', 'SH2D7', 'IGFBP1', 'OR5E1P', 'OR2B3', 'OR5H2', 'SNORA27', 'SLCO6A1', 'CALCB', 'TMEM8C', 'GABRA4', 'SNORD15B', 'LINC00479', 'LOC284798', 'CHRNB3', 'HGC6.3', 'CCKAR', 'XKR7', 'ISL1', 'MRGPRG-AS1', 'CGB8', 'SNORA36B', 'LINC00523', 'MYH7', 'CGB2', 'GUCA1C', 'NEUROG3', 'PRSS57', 'FAM71B', 'VWA5B1', 'PROKR1', 'SLCO1B7', 'VGLL2', 'UBE2DNL', 'NKX6-2', 'PRKY', 'CACNG7', 'GH1', 'CCER1', 'PPP1R2P9', 'TRPM3', 'C7ORF72', 'IL36A', 'BPIFB4', 'UGT2B10', 'USP50', 'MTVR2', 'MUC13', 'LINC00032', 'FGF23', 'OR4K1', 'KRTAP12-2', 'OR52N2', 'DEFB118', 'KRTAP1-5', 'DEFB115', 'AIRE', 'RNF151', 'EXD1', 'FGF16', 'APOA5', 'PASD1', 'SNORA77', 'OR2A14', 'POU4F3', 'SYT14P1', 'HTR1A', 'FMO9P', 'SNORD97', 'ZFAT-AS1', 'B4GALNT2', 'OLFM3', 'HMSD', 'OR2B11', 'FOXE3', 'OR10K1', 'LINC00923', 'OR1L4', 'DSCR10', 'KDM5D', 'ANKRD34C', 'CHRNA9', 'DPRX', 'POU4F2', 'KRTAP3-3', 'MYADML', 'SFTA3', 'OR52K2', 'HCRTR2', 'PTCHD3', 'LINC00710', 'OR1L1', 'MEP1A', 'FAM9B', 'SNORA2B', 'MAGEA9B', 'KRTAP12-1', 'LINC00964', 'OTC', 'GPR148', 'MYH16', 'PACRG-AS1', 'C12ORF42', 'ITLN2', 'OTOR', 'SPATA3', 'OR10AD1', 'HIST1H3F', 'LOC100129055', 'PLD5', 'LOC100132831', 'FAM83A-AS1', 'ARID3C', 'IGLL1', 'C11ORF87', 'MYL1', 'LINC00052', 'OVCH1', 'NPSR1', 'CLEC18C', 'MIR1-1HG', 'TMSB4Y', 'POM121L2', 'HRK', 'CDH10', 'VIL1', 'CLEC4M', 'SNORA64', 'SLC39A12', 'VCX3A', 'CLRN1-AS1', 'OR51F2', 'CMTM5', 'PSG3', 'HTR4', 'HPVC1', 'OR2M2', 'LOC100130264', 'C4ORF50', 'SOX3', 'HIST2H2AB', 'C7ORF57', 'ATOH7', 'AATK-AS1', 'CPA2', 'SPINK14', 'FERD3L', 'TSNAX-DISC1', 'H3F3AP5', 'OR5AR1', 'KRTAP4-8', 'CYP2W1', 'C15ORF43', 'C20ORF144', 'NF1P2', 'KLK12', 'DEFB108B', 'IFNA21', 'OR13C3', 'PPP1R3A', 'PRSS48', 'ADGRG7', 'ADAMTS20', 'CACNG3', 'KRTAP10-1', 'SNORA68', 'MBL2', 'PGA4', 'CXCL6', 'SLC12A1', 'COL20A1', 'KRT18P55', 'PRKAG3', 'S100A7', 'KRT73', 'LINC01101', 'LOC100130417', 'CELP', 'SNORA44', 'CLCA3P', 'LRRC30', 'TMPRSS11B', 'KRTAP7-1', 'SCARNA1', 'XIRP2', 'MCHR2', 'MMP21', 'PTX4', 'FAM19A1', 'MGC16025', 'SLURP1', 'TBX20', 'CCDC54', 'FFAR1', 'KRTAP5-2', 'FER1L6', 'HSFY1P1', 'GSX2', 'PPY2P', 'HTR6', 'NEUROD6', 'NUTM1', 'C2ORF27B', 'HEATR9', 'OR2T2', 'SLC28A2', 'HTR2C', 'KCNJ13', 'LINC01548', 'MYL2', 'FEZF1', 'MYH4', 'TMPRSS7', 'TMEM212', 'LINC00691', 'PRO0611', 'BARHL1', 'LOC285629', 'PATE3', 'SNORA72', 'OR5M1', 'TSHB', 'HILS1', 'C1ORF140', 'RFPL1', 'SNORA61', 'CDH19', 'SNORA5C', 'LOC644669', 'NYAP2', 'CLRN1', 'SALL3', 'GRM7', 'GCKR', 'TPTE2', 'ADGRE3', 'LRRC52', 'LRRIQ4', 'WFDC6', 'KRT12', 'CAPZA3', 'FAM71E2', 'C14ORF178', 'ADH6', 'PRTN3', 'LRRC74A', 'OR12D3', 'FNDC9', 'C5ORF47', 'A1CF', 'OR10R2', 'ZIC5', 'C12ORF56', 'PAGE2', 'C9ORF171', 'FSHR', 'OPRM1', 'OR4F17', 'KAAG1', 'CTXN3', 'CTRB2', 'OR5K1', 'FRG2DP', 'CAPNS2', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999031343205 Coefficient of Determination: 1.0 RMSE: 9.232144751857373e-16 NRMSE: 5.972173904401028e-16 MAPE: 2.139324611711844e-12 Pearson Correlation: 0.12638029307727575 Spearman Correlation: 0.112920828359303 Coefficient of Determination: -2.389202605113906 RMSE: 0.34009258840237033 NRMSE: 0.34036488030661566 MAPE: 548.9190402269214 Predictor: ElasticNet Pearson Correlation: 0.6970917268975934 Spearman Correlation: 0.5862978026581406 Coefficient of Determination: 0.38686994561170285 RMSE: 0.15473477113121512 NRMSE: 0.10009623842470541 MAPE: 139.80989834289701 Pearson Correlation: 0.18859703711496104 Spearman Correlation: 0.18039725441098967 Coefficient of Determination: 0.015063175043196209 RMSE: 0.18333804218768024 NRMSE: 0.18348483005172164 MAPE: 145.12992654278563 Predictor: RandomForests Pearson Correlation: 0.6005774635773903 Spearman Correlation: 0.5426280400156817 Coefficient of Determination: 0.15663432280245737 RMSE: 0.18147615771526596 NRMSE: 0.11739495019941389 MAPE: 132.69504944206724 Pearson Correlation: 0.10109491160356913 Spearman Correlation: 0.10039276703837216 Coefficient of Determination: 0.003718868733978309 RMSE: 0.1843908449130103 NRMSE: 0.18453847569356518 MAPE: 106.07473608661171 Protein: CDKN2A x_train_column_count: 1002 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'OR6C74', 'GYS2', 'IQCF6', 'IL13', 'ANKRD18DP', 'C10ORF53', 'LINC00469', 'LINC00696', 'LINC00895', 'CYP11B2', 'ADAM18', 'TCP10L2', 'C17ORF78', 'SNORA5B', 'FMO6P', 'PLET1', 'SCARNA11', 'LY6G6D', 'CGB5', 'POTEH', 'CLCA4', 'PLG', 'SST', 'TPD52L3', 'ZNF479', 'OR8B3', 'TMPRSS11F', 'TAAR9', 'OR2A2', 'F13B', 'SNORD89', 'OR1S2', 'OR5H14', 'ZCCHC13', 'OLAH', 'OPRD1', 'OR4D6', 'NOX3', 'LEUTX', 'VWC2L', 'EPS8L3', 'RPL13AP17', 'RAX2', 'DPPA5', 'KRTAP4-5', 'OR5T2', 'PRDM14', 'LOC285627', 'TKTL2', 'C18ORF42', 'OR10V1', 'OR2G2', 'OR8A1', 'SNORA71A', 'ZPBP', 'GPR78', 'FCAMR', 'BEND2', 'ACTRT2', 'TSGA13', 'SLC1A6', 'TTTY14', 'CST11', 'SSX5', 'STATH', 'CT45A1', 'OR5H6', 'IL26', 'LIPN', 'SPANXA2', 'OR6M1', 'ASB17', 'LINC01205', 'OR9G4', 'ACTR3BP2', 'SNORA74A', 'BARHL2', 'OR8D4', 'RTP2', 'LMNTD1', 'KLK9', 'OR4C12', 'LCNL1', 'TMEM202', 'OR11H4', 'OR2L8', 'GAGE2B', 'LOC145845', 'HNRNPCL1', 'KRTAP21-2', 'SERPINB3', 'DEFB110', 'KRT85', 'PWAR4', 'MYBPC2', 'LOC646813', 'C2ORF83', 'GPR52', 'PROP1', 'SSX8', 'LPO', 'NCOR1P1', 'SPATA31C1', 'ANKUB1', 'LINC00488', 'GOT1L1', 'OR2M4', 'LOC100129935', 'USP26', 'OR4C16', 'LINC00934', 'ZIM3', 'BPIFA3', 'DYDC1', 'FAM27B', 'COL6A4P1', 'TEX13B', 'CABS1', 'UGT2A3', 'OR4D9', 'FAM138D', 'ZAR1', 'FOXN3-AS2', 'POTED', 'CPLX4', 'SYCN', 'OR2M7', 'GSTA5', 'HIST1H4F', 'OR2T35', 'DUXA', 'SLC32A1', 'OR4K17', 'SLC38A8', 'TBC1D3P2', 'LINC00114', 'HTR3E', 'C3ORF30', 'KRTAP19-2', 'ASB18', 'CLRN2', 'RGS8', 'TMEM72', 'RBPJL', 'TRHR', 'HBD', 'CTRB1', 'B3GNT6', 'GABRG3', 'DAOA', 'WFDC8', 'DEFB104A', 'FRMPD4', 'LINC01565', 'KRTAP6-1', 'KRTAP25-1', 'HSFY2', 'EPPIN', 'LINC00608', 'OR56A1', 'OR6Y1', 'OR7A17', 'OR8H2', 'IL31', 'FBXW12', 'ALLC', 'OR4K2', 'OR4X2', 'GRIN2B', 'PRAMEF20', 'OR8G2', 'MYF5', 'LINC01566', 'KIR3DL3', 'MMD2', 'ITIH1', 'MAGEB3', 'ABRA', 'TCERG1L', 'OR8J3', 'CYLC2', 'SLC25A31', 'FAM169B', 'LINC00113', 'LOC729609', 'BMP15', 'FAM74A3', 'CFHR4', 'DEFB126', 'DEFB129', 'DEFB134', 'OR6B3', 'OR2AT4', 'FAM170B', 'INS', 'RHAG', 'CT47A1', 'CSNK1A1P1', 'OTOP1', 'GAGE12F', 'SRY', 'NKAIN3', 'PSKH2', 'MYH1', 'CCK', 'TCP10', 'SNORA70B', 'OR52H1', 'CD200R1L', 'OR5P3', 'REG4', 'POU6F2', 'TRPV5', 'KRTAP10-3', 'GPRC6A', 'ODF3', 'SPINK1', 'SCARNA8', 'FTHL17', 'ZNF705A', 'HOXC12', 'OR6B2', 'AQP2', 'KRTAP11-1', 'OR10H2', 'OR51I2', 'SNORA47', 'ACOT12', 'LCN9', 'DISC2', 'GUCY2EP', 'FGF6', 'TFF2', 'CHIAP2', 'CXADRP2', 'SNORA38B', 'C20ORF166-AS1', 'SNORD94', 'TMEM88B', 'OR4S1', 'OR5M10', 'MGC27382', 'MBD3L5', 'CNTN5', 'PYDC2', 'SNORA59B', 'ENAM', 'FIGLA', 'CCDC37', 'PCGEM1', 'PSG11', 'OR5AN1', 'OR6F1', 'OR14I1', 'SNORD115-26', 'LOC392196', 'SNCB', 'PISRT1', 'BOLL', 'OR7C2', 'SPATA19', 'TTTY8', 'TTTY9B', 'NANOS2', 'AVPR1B', 'XAGE3', 'CNGB1', 'MOGAT3', 'OR2T12', 'NLRP8', 'KRTAP10-7', 'MAGEA1', 'SLC51B', 'CYP2C18', 'CNTNAP4', 'UGT1A4', 'TAS2R60', 'OPN1MW', 'RESP18', 'RPL3L', 'OACYLP', 'IHH', 'LRRTM1', 'SLC17A6', 'MAGEB6', 'SNAR-F', 'MAGEA5', 'CLEC4G', 'PRAMEF1', 'PRDM9', 'SPDYC', 'SPRR2C', 'GRK1', 'KRTAP2-1', 'DNTT', 'KRTAP19-6', 'FOXR1', 'OR6K6', 'APCS', 'SFTPC', 'BSX', 'NEU2', 'PAQR9', 'OR5M3', 'KCNIP4-IT1', 'SLC6A5', 'MUSK', 'PAPOLB', 'CNGA2', 'IL17F', 'SLC2A2', 'GOLGA6L1', 'C10ORF120', 'ZFY', 'F9', 'CALR3', 'ANP32D', 'KRTAP10-12', 'C11ORF94', 'CA6', 'APOA2', 'CCDC166', 'HAO1', 'LINC00304', 'DEFB123', 'PPIAL4E', 'KGFLP1', 'SFTPB', 'LINC00575', 'OR5M8', 'ALX4', 'DKFZP434K028', 'EPB42', 'HCRTR1', 'SPANXN3', 'IZUMO1R', 'KRT3', 'OR4D11', 'KRTAP3-2', 'OR52R1', 'SSX9', 'LELP1', 'CRYGB', 'FTMT', 'OTOL1', 'AWAT1', 'OR7E24', 'LINC00410', 'LINC01553', 'BTN1A1', 'KRT25', 'PLA2G12B', 'KRTAP10-11', 'SCN1A', 'OR1K1', 'C16ORF90', 'ANXA10', 'KRTAP13-1', 'GABRR3', 'PROKR2', 'CELA2B', 'MT4', 'OR12D2', 'C12ORF77', 'COX7B2', 'ALPPL2', 'ZNF679', 'FKBP6', 'FOXD4L3', 'IQCJ', 'OR1E2', 'LGALS14', 'OR4D5', 'TMEM14E', 'PRR32', 'OR2T10', 'HBE1', 'NXNL1', 'PRB4', 'LOC286238', 'LINC01591', 'AADACL3', 'PRAMEF16', 'AGXT2', 'AKR1C8P', 'TMPRSS11BNL', 'SCTR', 'BANF2', 'BTF3P11', 'RPS4Y2', 'CDX4', 'SLC36A3', 'CHAT', 'OR4K5', 'OR10W1', 'MTNR1B', 'YIPF7', 'SPACA3', 'LYZL1', 'TNP1', 'EPGN', 'NEUROD1', 'KRTAP9-2', 'SVOP', 'SLC5A8', 'ANGPTL3', 'SPRR2E', 'OR2G6', 'INSC', 'OR51B5', 'NCAN', 'OR7D4', 'OR2M3', 'PLCZ1', 'SLC10A1', 'LINC01142', 'DAW1', 'OR6A2', 'AADAC', 'NKX2-3', 'TRIM49', 'ACSM2B', 'GBA3', 'ITPK1-AS1', 'OCSTAMP', 'BCYRN1', 'CETN1', 'HIST1H3B', 'SNORA16B', 'GKN2', 'EDDM3B', 'PCSK2', 'HIST1H4B', 'FAM170A', 'HULC', 'LOC647859', 'MCF2', 'RSPH6A', 'C1ORF141', 'C1ORF94', 'OR5B17', 'OR4D10', 'CTRC', 'KRTAP1-3', 'SLC9C1', 'PTH2', 'BET1P1', 'SHH', 'GPHA2', 'OR10AG1', 'C12ORF50', 'ZSCAN10', 'LHX3', 'OR10G8', 'PRAC1', 'PSG4', 'DEFB119', 'HS3ST4', 'PRG1', 'IL3', 'GUCY2F', 'DMRT1', 'LINC00520', 'OR1M1', 'OR1N1', 'OR1S1', 'NLRP13', 'UGT2B28', 'FAM47C', 'MMP23A', 'KRT71', 'TDRG1', 'FAM138B', 'NXPE1', 'FAM150A', 'AMER3', 'PCDH8', 'GCGR', 'NPSR1-AS1', 'ARL13A', 'DRD3', 'HSD52', 'TARM1', 'TCEB3C', 'LINC00202-2', 'SH2D7', 'IGFBP1', 'OR5E1P', 'OR2B3', 'OR5H2', 'SNORA27', 'SLCO6A1', 'CALCB', 'TMEM8C', 'GABRA4', 'SNORD15B', 'LINC00479', 'LOC284798', 'CHRNB3', 'HGC6.3', 'CCKAR', 'XKR7', 'ISL1', 'MRGPRG-AS1', 'CGB8', 'SNORA36B', 'LINC00523', 'MYH7', 'CGB2', 'GUCA1C', 'NEUROG3', 'PRSS57', 'FAM71B', 'VWA5B1', 'PROKR1', 'SLCO1B7', 'VGLL2', 'UBE2DNL', 'NKX6-2', 'PRKY', 'CACNG7', 'GH1', 'CCER1', 'PPP1R2P9', 'TRPM3', 'C7ORF72', 'IL36A', 'BPIFB4', 'UGT2B10', 'USP50', 'MTVR2', 'MUC13', 'LINC00032', 'FGF23', 'OR4K1', 'KRTAP12-2', 'OR52N2', 'DEFB118', 'KRTAP1-5', 'DEFB115', 'AIRE', 'RNF151', 'EXD1', 'FGF16', 'APOA5', 'PASD1', 'SNORA77', 'OR2A14', 'POU4F3', 'SYT14P1', 'HTR1A', 'FMO9P', 'SNORD97', 'ZFAT-AS1', 'B4GALNT2', 'OLFM3', 'HMSD', 'OR2B11', 'FOXE3', 'OR10K1', 'LINC00923', 'OR1L4', 'DSCR10', 'KDM5D', 'ANKRD34C', 'CHRNA9', 'DPRX', 'POU4F2', 'KRTAP3-3', 'MYADML', 'SFTA3', 'OR52K2', 'HCRTR2', 'PTCHD3', 'LINC00710', 'OR1L1', 'MEP1A', 'FAM9B', 'SNORA2B', 'MAGEA9B', 'KRTAP12-1', 'LINC00964', 'OTC', 'GPR148', 'MYH16', 'PACRG-AS1', 'C12ORF42', 'ITLN2', 'OTOR', 'SPATA3', 'OR10AD1', 'HIST1H3F', 'LOC100129055', 'PLD5', 'LOC100132831', 'FAM83A-AS1', 'ARID3C', 'IGLL1', 'C11ORF87', 'MYL1', 'LINC00052', 'OVCH1', 'NPSR1', 'CLEC18C', 'MIR1-1HG', 'TMSB4Y', 'POM121L2', 'HRK', 'CDH10', 'VIL1', 'CLEC4M', 'SNORA64', 'SLC39A12', 'VCX3A', 'CLRN1-AS1', 'OR51F2', 'CMTM5', 'PSG3', 'HTR4', 'HPVC1', 'OR2M2', 'LOC100130264', 'C4ORF50', 'SOX3', 'HIST2H2AB', 'C7ORF57', 'ATOH7', 'AATK-AS1', 'CPA2', 'SPINK14', 'FERD3L', 'TSNAX-DISC1', 'H3F3AP5', 'OR5AR1', 'KRTAP4-8', 'CYP2W1', 'C15ORF43', 'C20ORF144', 'NF1P2', 'KLK12', 'DEFB108B', 'IFNA21', 'OR13C3', 'PPP1R3A', 'PRSS48', 'ADGRG7', 'ADAMTS20', 'CACNG3', 'KRTAP10-1', 'SNORA68', 'MBL2', 'PGA4', 'CXCL6', 'SLC12A1', 'COL20A1', 'KRT18P55', 'PRKAG3', 'S100A7', 'KRT73', 'LINC01101', 'LOC100130417', 'CELP', 'SNORA44', 'CLCA3P', 'LRRC30', 'TMPRSS11B', 'KRTAP7-1', 'SCARNA1', 'XIRP2', 'MCHR2', 'MMP21', 'PTX4', 'FAM19A1', 'MGC16025', 'SLURP1', 'TBX20', 'CCDC54', 'FFAR1', 'KRTAP5-2', 'FER1L6', 'HSFY1P1', 'GSX2', 'PPY2P', 'HTR6', 'NEUROD6', 'NUTM1', 'C2ORF27B', 'HEATR9', 'OR2T2', 'SLC28A2', 'HTR2C', 'KCNJ13', 'LINC01548', 'MYL2', 'FEZF1', 'MYH4', 'TMPRSS7', 'TMEM212', 'LINC00691', 'PRO0611', 'BARHL1', 'LOC285629', 'PATE3', 'SNORA72', 'OR5M1', 'TSHB', 'HILS1', 'C1ORF140', 'RFPL1', 'SNORA61', 'CDH19', 'SNORA5C', 'LOC644669', 'NYAP2', 'CLRN1', 'SALL3', 'GRM7', 'GCKR', 'TPTE2', 'ADGRE3', 'LRRC52', 'LRRIQ4', 'WFDC6', 'KRT12', 'CAPZA3', 'FAM71E2', 'C14ORF178', 'ADH6', 'PRTN3', 'LRRC74A', 'OR12D3', 'FNDC9', 'C5ORF47', 'A1CF', 'OR10R2', 'ZIC5', 'C12ORF56', 'PAGE2', 'C9ORF171', 'FSHR', 'OPRM1', 'OR4F17', 'KAAG1', 'CTXN3', 'CTRB2', 'OR5K1', 'FRG2DP', 'CAPNS2', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 3.1140790793875316e-15 NRMSE: 7.0398532370013135e-16 MAPE: 2.669050181282137e-12 Pearson Correlation: 0.2285110339243571 Spearman Correlation: 0.2003219198127012 Coefficient of Determination: -1.0417116537634574 RMSE: 1.067183877204915 NRMSE: 0.28819440378204564 MAPE: 1176.8418895531147 Predictor: ElasticNet Pearson Correlation: 0.9002505073403797 Spearman Correlation: 0.8790490409804 Coefficient of Determination: 0.7711610444207531 RMSE: 0.30745618687627996 NRMSE: 0.06950518523257147 MAPE: 145.37170127644958 Pearson Correlation: 0.5275182725040916 Spearman Correlation: 0.41621792995805296 Coefficient of Determination: 0.27757866686039356 RMSE: 0.6348006059959852 NRMSE: 0.17142873507858095 MAPE: 916.5871413410962 Predictor: RandomForests Pearson Correlation: 0.6367970587155104 Spearman Correlation: 0.5586319925058439 Coefficient of Determination: 0.39870260681637193 RMSE: 0.49838265427754735 NRMSE: 0.11266704064147107 MAPE: 205.65133548164957 Pearson Correlation: 0.6719195042850558 Spearman Correlation: 0.5062309002806783 Coefficient of Determination: 0.4290577163695076 RMSE: 0.5643365196032228 NRMSE: 0.15239981625795918 MAPE: 406.03758729145164 Protein: TP53 x_train_column_count: 1002 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'OR6C74', 'GYS2', 'IQCF6', 'IL13', 'ANKRD18DP', 'C10ORF53', 'LINC00469', 'LINC00696', 'LINC00895', 'CYP11B2', 'ADAM18', 'TCP10L2', 'C17ORF78', 'SNORA5B', 'FMO6P', 'PLET1', 'SCARNA11', 'LY6G6D', 'CGB5', 'POTEH', 'CLCA4', 'PLG', 'SST', 'TPD52L3', 'ZNF479', 'OR8B3', 'TMPRSS11F', 'TAAR9', 'OR2A2', 'F13B', 'SNORD89', 'OR1S2', 'OR5H14', 'ZCCHC13', 'OLAH', 'OPRD1', 'OR4D6', 'NOX3', 'LEUTX', 'VWC2L', 'EPS8L3', 'RPL13AP17', 'RAX2', 'DPPA5', 'KRTAP4-5', 'OR5T2', 'PRDM14', 'LOC285627', 'TKTL2', 'C18ORF42', 'OR10V1', 'OR2G2', 'OR8A1', 'SNORA71A', 'ZPBP', 'GPR78', 'FCAMR', 'BEND2', 'ACTRT2', 'TSGA13', 'SLC1A6', 'TTTY14', 'CST11', 'SSX5', 'STATH', 'CT45A1', 'OR5H6', 'IL26', 'LIPN', 'SPANXA2', 'OR6M1', 'ASB17', 'LINC01205', 'OR9G4', 'ACTR3BP2', 'SNORA74A', 'BARHL2', 'OR8D4', 'RTP2', 'LMNTD1', 'KLK9', 'OR4C12', 'LCNL1', 'TMEM202', 'OR11H4', 'OR2L8', 'GAGE2B', 'LOC145845', 'HNRNPCL1', 'KRTAP21-2', 'SERPINB3', 'DEFB110', 'KRT85', 'PWAR4', 'MYBPC2', 'LOC646813', 'C2ORF83', 'GPR52', 'PROP1', 'SSX8', 'LPO', 'NCOR1P1', 'SPATA31C1', 'ANKUB1', 'LINC00488', 'GOT1L1', 'OR2M4', 'LOC100129935', 'USP26', 'OR4C16', 'LINC00934', 'ZIM3', 'BPIFA3', 'DYDC1', 'FAM27B', 'COL6A4P1', 'TEX13B', 'CABS1', 'UGT2A3', 'OR4D9', 'FAM138D', 'ZAR1', 'FOXN3-AS2', 'POTED', 'CPLX4', 'SYCN', 'OR2M7', 'GSTA5', 'HIST1H4F', 'OR2T35', 'DUXA', 'SLC32A1', 'OR4K17', 'SLC38A8', 'TBC1D3P2', 'LINC00114', 'HTR3E', 'C3ORF30', 'KRTAP19-2', 'ASB18', 'CLRN2', 'RGS8', 'TMEM72', 'RBPJL', 'TRHR', 'HBD', 'CTRB1', 'B3GNT6', 'GABRG3', 'DAOA', 'WFDC8', 'DEFB104A', 'FRMPD4', 'LINC01565', 'KRTAP6-1', 'KRTAP25-1', 'HSFY2', 'EPPIN', 'LINC00608', 'OR56A1', 'OR6Y1', 'OR7A17', 'OR8H2', 'IL31', 'FBXW12', 'ALLC', 'OR4K2', 'OR4X2', 'GRIN2B', 'PRAMEF20', 'OR8G2', 'MYF5', 'LINC01566', 'KIR3DL3', 'MMD2', 'ITIH1', 'MAGEB3', 'ABRA', 'TCERG1L', 'OR8J3', 'CYLC2', 'SLC25A31', 'FAM169B', 'LINC00113', 'LOC729609', 'BMP15', 'FAM74A3', 'CFHR4', 'DEFB126', 'DEFB129', 'DEFB134', 'OR6B3', 'OR2AT4', 'FAM170B', 'INS', 'RHAG', 'CT47A1', 'CSNK1A1P1', 'OTOP1', 'GAGE12F', 'SRY', 'NKAIN3', 'PSKH2', 'MYH1', 'CCK', 'TCP10', 'SNORA70B', 'OR52H1', 'CD200R1L', 'OR5P3', 'REG4', 'POU6F2', 'TRPV5', 'KRTAP10-3', 'GPRC6A', 'ODF3', 'SPINK1', 'SCARNA8', 'FTHL17', 'ZNF705A', 'HOXC12', 'OR6B2', 'AQP2', 'KRTAP11-1', 'OR10H2', 'OR51I2', 'SNORA47', 'ACOT12', 'LCN9', 'DISC2', 'GUCY2EP', 'FGF6', 'TFF2', 'CHIAP2', 'CXADRP2', 'SNORA38B', 'C20ORF166-AS1', 'SNORD94', 'TMEM88B', 'OR4S1', 'OR5M10', 'MGC27382', 'MBD3L5', 'CNTN5', 'PYDC2', 'SNORA59B', 'ENAM', 'FIGLA', 'CCDC37', 'PCGEM1', 'PSG11', 'OR5AN1', 'OR6F1', 'OR14I1', 'SNORD115-26', 'LOC392196', 'SNCB', 'PISRT1', 'BOLL', 'OR7C2', 'SPATA19', 'TTTY8', 'TTTY9B', 'NANOS2', 'AVPR1B', 'XAGE3', 'CNGB1', 'MOGAT3', 'OR2T12', 'NLRP8', 'KRTAP10-7', 'MAGEA1', 'SLC51B', 'CYP2C18', 'CNTNAP4', 'UGT1A4', 'TAS2R60', 'OPN1MW', 'RESP18', 'RPL3L', 'OACYLP', 'IHH', 'LRRTM1', 'SLC17A6', 'MAGEB6', 'SNAR-F', 'MAGEA5', 'CLEC4G', 'PRAMEF1', 'PRDM9', 'SPDYC', 'SPRR2C', 'GRK1', 'KRTAP2-1', 'DNTT', 'KRTAP19-6', 'FOXR1', 'OR6K6', 'APCS', 'SFTPC', 'BSX', 'NEU2', 'PAQR9', 'OR5M3', 'KCNIP4-IT1', 'SLC6A5', 'MUSK', 'PAPOLB', 'CNGA2', 'IL17F', 'SLC2A2', 'GOLGA6L1', 'C10ORF120', 'ZFY', 'F9', 'CALR3', 'ANP32D', 'KRTAP10-12', 'C11ORF94', 'CA6', 'APOA2', 'CCDC166', 'HAO1', 'LINC00304', 'DEFB123', 'PPIAL4E', 'KGFLP1', 'SFTPB', 'LINC00575', 'OR5M8', 'ALX4', 'DKFZP434K028', 'EPB42', 'HCRTR1', 'SPANXN3', 'IZUMO1R', 'KRT3', 'OR4D11', 'KRTAP3-2', 'OR52R1', 'SSX9', 'LELP1', 'CRYGB', 'FTMT', 'OTOL1', 'AWAT1', 'OR7E24', 'LINC00410', 'LINC01553', 'BTN1A1', 'KRT25', 'PLA2G12B', 'KRTAP10-11', 'SCN1A', 'OR1K1', 'C16ORF90', 'ANXA10', 'KRTAP13-1', 'GABRR3', 'PROKR2', 'CELA2B', 'MT4', 'OR12D2', 'C12ORF77', 'COX7B2', 'ALPPL2', 'ZNF679', 'FKBP6', 'FOXD4L3', 'IQCJ', 'OR1E2', 'LGALS14', 'OR4D5', 'TMEM14E', 'PRR32', 'OR2T10', 'HBE1', 'NXNL1', 'PRB4', 'LOC286238', 'LINC01591', 'AADACL3', 'PRAMEF16', 'AGXT2', 'AKR1C8P', 'TMPRSS11BNL', 'SCTR', 'BANF2', 'BTF3P11', 'RPS4Y2', 'CDX4', 'SLC36A3', 'CHAT', 'OR4K5', 'OR10W1', 'MTNR1B', 'YIPF7', 'SPACA3', 'LYZL1', 'TNP1', 'EPGN', 'NEUROD1', 'KRTAP9-2', 'SVOP', 'SLC5A8', 'ANGPTL3', 'SPRR2E', 'OR2G6', 'INSC', 'OR51B5', 'NCAN', 'OR7D4', 'OR2M3', 'PLCZ1', 'SLC10A1', 'LINC01142', 'DAW1', 'OR6A2', 'AADAC', 'NKX2-3', 'TRIM49', 'ACSM2B', 'GBA3', 'ITPK1-AS1', 'OCSTAMP', 'BCYRN1', 'CETN1', 'HIST1H3B', 'SNORA16B', 'GKN2', 'EDDM3B', 'PCSK2', 'HIST1H4B', 'FAM170A', 'HULC', 'LOC647859', 'MCF2', 'RSPH6A', 'C1ORF141', 'C1ORF94', 'OR5B17', 'OR4D10', 'CTRC', 'KRTAP1-3', 'SLC9C1', 'PTH2', 'BET1P1', 'SHH', 'GPHA2', 'OR10AG1', 'C12ORF50', 'ZSCAN10', 'LHX3', 'OR10G8', 'PRAC1', 'PSG4', 'DEFB119', 'HS3ST4', 'PRG1', 'IL3', 'GUCY2F', 'DMRT1', 'LINC00520', 'OR1M1', 'OR1N1', 'OR1S1', 'NLRP13', 'UGT2B28', 'FAM47C', 'MMP23A', 'KRT71', 'TDRG1', 'FAM138B', 'NXPE1', 'FAM150A', 'AMER3', 'PCDH8', 'GCGR', 'NPSR1-AS1', 'ARL13A', 'DRD3', 'HSD52', 'TARM1', 'TCEB3C', 'LINC00202-2', 'SH2D7', 'IGFBP1', 'OR5E1P', 'OR2B3', 'OR5H2', 'SNORA27', 'SLCO6A1', 'CALCB', 'TMEM8C', 'GABRA4', 'SNORD15B', 'LINC00479', 'LOC284798', 'CHRNB3', 'HGC6.3', 'CCKAR', 'XKR7', 'ISL1', 'MRGPRG-AS1', 'CGB8', 'SNORA36B', 'LINC00523', 'MYH7', 'CGB2', 'GUCA1C', 'NEUROG3', 'PRSS57', 'FAM71B', 'VWA5B1', 'PROKR1', 'SLCO1B7', 'VGLL2', 'UBE2DNL', 'NKX6-2', 'PRKY', 'CACNG7', 'GH1', 'CCER1', 'PPP1R2P9', 'TRPM3', 'C7ORF72', 'IL36A', 'BPIFB4', 'UGT2B10', 'USP50', 'MTVR2', 'MUC13', 'LINC00032', 'FGF23', 'OR4K1', 'KRTAP12-2', 'OR52N2', 'DEFB118', 'KRTAP1-5', 'DEFB115', 'AIRE', 'RNF151', 'EXD1', 'FGF16', 'APOA5', 'PASD1', 'SNORA77', 'OR2A14', 'POU4F3', 'SYT14P1', 'HTR1A', 'FMO9P', 'SNORD97', 'ZFAT-AS1', 'B4GALNT2', 'OLFM3', 'HMSD', 'OR2B11', 'FOXE3', 'OR10K1', 'LINC00923', 'OR1L4', 'DSCR10', 'KDM5D', 'ANKRD34C', 'CHRNA9', 'DPRX', 'POU4F2', 'KRTAP3-3', 'MYADML', 'SFTA3', 'OR52K2', 'HCRTR2', 'PTCHD3', 'LINC00710', 'OR1L1', 'MEP1A', 'FAM9B', 'SNORA2B', 'MAGEA9B', 'KRTAP12-1', 'LINC00964', 'OTC', 'GPR148', 'MYH16', 'PACRG-AS1', 'C12ORF42', 'ITLN2', 'OTOR', 'SPATA3', 'OR10AD1', 'HIST1H3F', 'LOC100129055', 'PLD5', 'LOC100132831', 'FAM83A-AS1', 'ARID3C', 'IGLL1', 'C11ORF87', 'MYL1', 'LINC00052', 'OVCH1', 'NPSR1', 'CLEC18C', 'MIR1-1HG', 'TMSB4Y', 'POM121L2', 'HRK', 'CDH10', 'VIL1', 'CLEC4M', 'SNORA64', 'SLC39A12', 'VCX3A', 'CLRN1-AS1', 'OR51F2', 'CMTM5', 'PSG3', 'HTR4', 'HPVC1', 'OR2M2', 'LOC100130264', 'C4ORF50', 'SOX3', 'HIST2H2AB', 'C7ORF57', 'ATOH7', 'AATK-AS1', 'CPA2', 'SPINK14', 'FERD3L', 'TSNAX-DISC1', 'H3F3AP5', 'OR5AR1', 'KRTAP4-8', 'CYP2W1', 'C15ORF43', 'C20ORF144', 'NF1P2', 'KLK12', 'DEFB108B', 'IFNA21', 'OR13C3', 'PPP1R3A', 'PRSS48', 'ADGRG7', 'ADAMTS20', 'CACNG3', 'KRTAP10-1', 'SNORA68', 'MBL2', 'PGA4', 'CXCL6', 'SLC12A1', 'COL20A1', 'KRT18P55', 'PRKAG3', 'S100A7', 'KRT73', 'LINC01101', 'LOC100130417', 'CELP', 'SNORA44', 'CLCA3P', 'LRRC30', 'TMPRSS11B', 'KRTAP7-1', 'SCARNA1', 'XIRP2', 'MCHR2', 'MMP21', 'PTX4', 'FAM19A1', 'MGC16025', 'SLURP1', 'TBX20', 'CCDC54', 'FFAR1', 'KRTAP5-2', 'FER1L6', 'HSFY1P1', 'GSX2', 'PPY2P', 'HTR6', 'NEUROD6', 'NUTM1', 'C2ORF27B', 'HEATR9', 'OR2T2', 'SLC28A2', 'HTR2C', 'KCNJ13', 'LINC01548', 'MYL2', 'FEZF1', 'MYH4', 'TMPRSS7', 'TMEM212', 'LINC00691', 'PRO0611', 'BARHL1', 'LOC285629', 'PATE3', 'SNORA72', 'OR5M1', 'TSHB', 'HILS1', 'C1ORF140', 'RFPL1', 'SNORA61', 'CDH19', 'SNORA5C', 'LOC644669', 'NYAP2', 'CLRN1', 'SALL3', 'GRM7', 'GCKR', 'TPTE2', 'ADGRE3', 'LRRC52', 'LRRIQ4', 'WFDC6', 'KRT12', 'CAPZA3', 'FAM71E2', 'C14ORF178', 'ADH6', 'PRTN3', 'LRRC74A', 'OR12D3', 'FNDC9', 'C5ORF47', 'A1CF', 'OR10R2', 'ZIC5', 'C12ORF56', 'PAGE2', 'C9ORF171', 'FSHR', 'OPRM1', 'OR4F17', 'KAAG1', 'CTXN3', 'CTRB2', 'OR5K1', 'FRG2DP', 'CAPNS2', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.7811161181824987e-15 NRMSE: 4.2805001638608484e-16 MAPE: 4.227794765386803e-12 Pearson Correlation: 0.3779560698548651 Spearman Correlation: 0.2939664422983124 Coefficient of Determination: -1.2810577581713214 RMSE: 0.6352961434577297 NRMSE: 0.22844983403133148 MAPE: 1693.5058027270998 Predictor: ElasticNet Pearson Correlation: 0.8680673599596158 Spearman Correlation: 0.7526445637403373 Coefficient of Determination: 0.7107299568919734 RMSE: 0.24354371044646209 NRMSE: 0.05853009143149775 MAPE: 588.9178402922262 Pearson Correlation: 0.4821668778220998 Spearman Correlation: 0.4061457418788411 Coefficient of Determination: 0.21444179361831628 RMSE: 0.3728183352490532 NRMSE: 0.13406391285161395 MAPE: 427.76531867217227 Predictor: RandomForests Pearson Correlation: 0.641750399243109 Spearman Correlation: 0.518312831192323 Coefficient of Determination: 0.36581217871663707 RMSE: 0.3606069868599514 NRMSE: 0.08666353925978165 MAPE: 526.0549284913765 Pearson Correlation: 0.4614351569825657 Spearman Correlation: 0.4689536427317829 Coefficient of Determination: 0.21154376488556337 RMSE: 0.3735053903918798 NRMSE: 0.13431097500517092 MAPE: 498.46629482419286 Protein: CTNNB1 x_train_column_count: 1002 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'OR6C74', 'GYS2', 'IQCF6', 'IL13', 'ANKRD18DP', 'C10ORF53', 'LINC00469', 'LINC00696', 'LINC00895', 'CYP11B2', 'ADAM18', 'TCP10L2', 'C17ORF78', 'SNORA5B', 'FMO6P', 'PLET1', 'SCARNA11', 'LY6G6D', 'CGB5', 'POTEH', 'CLCA4', 'PLG', 'SST', 'TPD52L3', 'ZNF479', 'OR8B3', 'TMPRSS11F', 'TAAR9', 'OR2A2', 'F13B', 'SNORD89', 'OR1S2', 'OR5H14', 'ZCCHC13', 'OLAH', 'OPRD1', 'OR4D6', 'NOX3', 'LEUTX', 'VWC2L', 'EPS8L3', 'RPL13AP17', 'RAX2', 'DPPA5', 'KRTAP4-5', 'OR5T2', 'PRDM14', 'LOC285627', 'TKTL2', 'C18ORF42', 'OR10V1', 'OR2G2', 'OR8A1', 'SNORA71A', 'ZPBP', 'GPR78', 'FCAMR', 'BEND2', 'ACTRT2', 'TSGA13', 'SLC1A6', 'TTTY14', 'CST11', 'SSX5', 'STATH', 'CT45A1', 'OR5H6', 'IL26', 'LIPN', 'SPANXA2', 'OR6M1', 'ASB17', 'LINC01205', 'OR9G4', 'ACTR3BP2', 'SNORA74A', 'BARHL2', 'OR8D4', 'RTP2', 'LMNTD1', 'KLK9', 'OR4C12', 'LCNL1', 'TMEM202', 'OR11H4', 'OR2L8', 'GAGE2B', 'LOC145845', 'HNRNPCL1', 'KRTAP21-2', 'SERPINB3', 'DEFB110', 'KRT85', 'PWAR4', 'MYBPC2', 'LOC646813', 'C2ORF83', 'GPR52', 'PROP1', 'SSX8', 'LPO', 'NCOR1P1', 'SPATA31C1', 'ANKUB1', 'LINC00488', 'GOT1L1', 'OR2M4', 'LOC100129935', 'USP26', 'OR4C16', 'LINC00934', 'ZIM3', 'BPIFA3', 'DYDC1', 'FAM27B', 'COL6A4P1', 'TEX13B', 'CABS1', 'UGT2A3', 'OR4D9', 'FAM138D', 'ZAR1', 'FOXN3-AS2', 'POTED', 'CPLX4', 'SYCN', 'OR2M7', 'GSTA5', 'HIST1H4F', 'OR2T35', 'DUXA', 'SLC32A1', 'OR4K17', 'SLC38A8', 'TBC1D3P2', 'LINC00114', 'HTR3E', 'C3ORF30', 'KRTAP19-2', 'ASB18', 'CLRN2', 'RGS8', 'TMEM72', 'RBPJL', 'TRHR', 'HBD', 'CTRB1', 'B3GNT6', 'GABRG3', 'DAOA', 'WFDC8', 'DEFB104A', 'FRMPD4', 'LINC01565', 'KRTAP6-1', 'KRTAP25-1', 'HSFY2', 'EPPIN', 'LINC00608', 'OR56A1', 'OR6Y1', 'OR7A17', 'OR8H2', 'IL31', 'FBXW12', 'ALLC', 'OR4K2', 'OR4X2', 'GRIN2B', 'PRAMEF20', 'OR8G2', 'MYF5', 'LINC01566', 'KIR3DL3', 'MMD2', 'ITIH1', 'MAGEB3', 'ABRA', 'TCERG1L', 'OR8J3', 'CYLC2', 'SLC25A31', 'FAM169B', 'LINC00113', 'LOC729609', 'BMP15', 'FAM74A3', 'CFHR4', 'DEFB126', 'DEFB129', 'DEFB134', 'OR6B3', 'OR2AT4', 'FAM170B', 'INS', 'RHAG', 'CT47A1', 'CSNK1A1P1', 'OTOP1', 'GAGE12F', 'SRY', 'NKAIN3', 'PSKH2', 'MYH1', 'CCK', 'TCP10', 'SNORA70B', 'OR52H1', 'CD200R1L', 'OR5P3', 'REG4', 'POU6F2', 'TRPV5', 'KRTAP10-3', 'GPRC6A', 'ODF3', 'SPINK1', 'SCARNA8', 'FTHL17', 'ZNF705A', 'HOXC12', 'OR6B2', 'AQP2', 'KRTAP11-1', 'OR10H2', 'OR51I2', 'SNORA47', 'ACOT12', 'LCN9', 'DISC2', 'GUCY2EP', 'FGF6', 'TFF2', 'CHIAP2', 'CXADRP2', 'SNORA38B', 'C20ORF166-AS1', 'SNORD94', 'TMEM88B', 'OR4S1', 'OR5M10', 'MGC27382', 'MBD3L5', 'CNTN5', 'PYDC2', 'SNORA59B', 'ENAM', 'FIGLA', 'CCDC37', 'PCGEM1', 'PSG11', 'OR5AN1', 'OR6F1', 'OR14I1', 'SNORD115-26', 'LOC392196', 'SNCB', 'PISRT1', 'BOLL', 'OR7C2', 'SPATA19', 'TTTY8', 'TTTY9B', 'NANOS2', 'AVPR1B', 'XAGE3', 'CNGB1', 'MOGAT3', 'OR2T12', 'NLRP8', 'KRTAP10-7', 'MAGEA1', 'SLC51B', 'CYP2C18', 'CNTNAP4', 'UGT1A4', 'TAS2R60', 'OPN1MW', 'RESP18', 'RPL3L', 'OACYLP', 'IHH', 'LRRTM1', 'SLC17A6', 'MAGEB6', 'SNAR-F', 'MAGEA5', 'CLEC4G', 'PRAMEF1', 'PRDM9', 'SPDYC', 'SPRR2C', 'GRK1', 'KRTAP2-1', 'DNTT', 'KRTAP19-6', 'FOXR1', 'OR6K6', 'APCS', 'SFTPC', 'BSX', 'NEU2', 'PAQR9', 'OR5M3', 'KCNIP4-IT1', 'SLC6A5', 'MUSK', 'PAPOLB', 'CNGA2', 'IL17F', 'SLC2A2', 'GOLGA6L1', 'C10ORF120', 'ZFY', 'F9', 'CALR3', 'ANP32D', 'KRTAP10-12', 'C11ORF94', 'CA6', 'APOA2', 'CCDC166', 'HAO1', 'LINC00304', 'DEFB123', 'PPIAL4E', 'KGFLP1', 'SFTPB', 'LINC00575', 'OR5M8', 'ALX4', 'DKFZP434K028', 'EPB42', 'HCRTR1', 'SPANXN3', 'IZUMO1R', 'KRT3', 'OR4D11', 'KRTAP3-2', 'OR52R1', 'SSX9', 'LELP1', 'CRYGB', 'FTMT', 'OTOL1', 'AWAT1', 'OR7E24', 'LINC00410', 'LINC01553', 'BTN1A1', 'KRT25', 'PLA2G12B', 'KRTAP10-11', 'SCN1A', 'OR1K1', 'C16ORF90', 'ANXA10', 'KRTAP13-1', 'GABRR3', 'PROKR2', 'CELA2B', 'MT4', 'OR12D2', 'C12ORF77', 'COX7B2', 'ALPPL2', 'ZNF679', 'FKBP6', 'FOXD4L3', 'IQCJ', 'OR1E2', 'LGALS14', 'OR4D5', 'TMEM14E', 'PRR32', 'OR2T10', 'HBE1', 'NXNL1', 'PRB4', 'LOC286238', 'LINC01591', 'AADACL3', 'PRAMEF16', 'AGXT2', 'AKR1C8P', 'TMPRSS11BNL', 'SCTR', 'BANF2', 'BTF3P11', 'RPS4Y2', 'CDX4', 'SLC36A3', 'CHAT', 'OR4K5', 'OR10W1', 'MTNR1B', 'YIPF7', 'SPACA3', 'LYZL1', 'TNP1', 'EPGN', 'NEUROD1', 'KRTAP9-2', 'SVOP', 'SLC5A8', 'ANGPTL3', 'SPRR2E', 'OR2G6', 'INSC', 'OR51B5', 'NCAN', 'OR7D4', 'OR2M3', 'PLCZ1', 'SLC10A1', 'LINC01142', 'DAW1', 'OR6A2', 'AADAC', 'NKX2-3', 'TRIM49', 'ACSM2B', 'GBA3', 'ITPK1-AS1', 'OCSTAMP', 'BCYRN1', 'CETN1', 'HIST1H3B', 'SNORA16B', 'GKN2', 'EDDM3B', 'PCSK2', 'HIST1H4B', 'FAM170A', 'HULC', 'LOC647859', 'MCF2', 'RSPH6A', 'C1ORF141', 'C1ORF94', 'OR5B17', 'OR4D10', 'CTRC', 'KRTAP1-3', 'SLC9C1', 'PTH2', 'BET1P1', 'SHH', 'GPHA2', 'OR10AG1', 'C12ORF50', 'ZSCAN10', 'LHX3', 'OR10G8', 'PRAC1', 'PSG4', 'DEFB119', 'HS3ST4', 'PRG1', 'IL3', 'GUCY2F', 'DMRT1', 'LINC00520', 'OR1M1', 'OR1N1', 'OR1S1', 'NLRP13', 'UGT2B28', 'FAM47C', 'MMP23A', 'KRT71', 'TDRG1', 'FAM138B', 'NXPE1', 'FAM150A', 'AMER3', 'PCDH8', 'GCGR', 'NPSR1-AS1', 'ARL13A', 'DRD3', 'HSD52', 'TARM1', 'TCEB3C', 'LINC00202-2', 'SH2D7', 'IGFBP1', 'OR5E1P', 'OR2B3', 'OR5H2', 'SNORA27', 'SLCO6A1', 'CALCB', 'TMEM8C', 'GABRA4', 'SNORD15B', 'LINC00479', 'LOC284798', 'CHRNB3', 'HGC6.3', 'CCKAR', 'XKR7', 'ISL1', 'MRGPRG-AS1', 'CGB8', 'SNORA36B', 'LINC00523', 'MYH7', 'CGB2', 'GUCA1C', 'NEUROG3', 'PRSS57', 'FAM71B', 'VWA5B1', 'PROKR1', 'SLCO1B7', 'VGLL2', 'UBE2DNL', 'NKX6-2', 'PRKY', 'CACNG7', 'GH1', 'CCER1', 'PPP1R2P9', 'TRPM3', 'C7ORF72', 'IL36A', 'BPIFB4', 'UGT2B10', 'USP50', 'MTVR2', 'MUC13', 'LINC00032', 'FGF23', 'OR4K1', 'KRTAP12-2', 'OR52N2', 'DEFB118', 'KRTAP1-5', 'DEFB115', 'AIRE', 'RNF151', 'EXD1', 'FGF16', 'APOA5', 'PASD1', 'SNORA77', 'OR2A14', 'POU4F3', 'SYT14P1', 'HTR1A', 'FMO9P', 'SNORD97', 'ZFAT-AS1', 'B4GALNT2', 'OLFM3', 'HMSD', 'OR2B11', 'FOXE3', 'OR10K1', 'LINC00923', 'OR1L4', 'DSCR10', 'KDM5D', 'ANKRD34C', 'CHRNA9', 'DPRX', 'POU4F2', 'KRTAP3-3', 'MYADML', 'SFTA3', 'OR52K2', 'HCRTR2', 'PTCHD3', 'LINC00710', 'OR1L1', 'MEP1A', 'FAM9B', 'SNORA2B', 'MAGEA9B', 'KRTAP12-1', 'LINC00964', 'OTC', 'GPR148', 'MYH16', 'PACRG-AS1', 'C12ORF42', 'ITLN2', 'OTOR', 'SPATA3', 'OR10AD1', 'HIST1H3F', 'LOC100129055', 'PLD5', 'LOC100132831', 'FAM83A-AS1', 'ARID3C', 'IGLL1', 'C11ORF87', 'MYL1', 'LINC00052', 'OVCH1', 'NPSR1', 'CLEC18C', 'MIR1-1HG', 'TMSB4Y', 'POM121L2', 'HRK', 'CDH10', 'VIL1', 'CLEC4M', 'SNORA64', 'SLC39A12', 'VCX3A', 'CLRN1-AS1', 'OR51F2', 'CMTM5', 'PSG3', 'HTR4', 'HPVC1', 'OR2M2', 'LOC100130264', 'C4ORF50', 'SOX3', 'HIST2H2AB', 'C7ORF57', 'ATOH7', 'AATK-AS1', 'CPA2', 'SPINK14', 'FERD3L', 'TSNAX-DISC1', 'H3F3AP5', 'OR5AR1', 'KRTAP4-8', 'CYP2W1', 'C15ORF43', 'C20ORF144', 'NF1P2', 'KLK12', 'DEFB108B', 'IFNA21', 'OR13C3', 'PPP1R3A', 'PRSS48', 'ADGRG7', 'ADAMTS20', 'CACNG3', 'KRTAP10-1', 'SNORA68', 'MBL2', 'PGA4', 'CXCL6', 'SLC12A1', 'COL20A1', 'KRT18P55', 'PRKAG3', 'S100A7', 'KRT73', 'LINC01101', 'LOC100130417', 'CELP', 'SNORA44', 'CLCA3P', 'LRRC30', 'TMPRSS11B', 'KRTAP7-1', 'SCARNA1', 'XIRP2', 'MCHR2', 'MMP21', 'PTX4', 'FAM19A1', 'MGC16025', 'SLURP1', 'TBX20', 'CCDC54', 'FFAR1', 'KRTAP5-2', 'FER1L6', 'HSFY1P1', 'GSX2', 'PPY2P', 'HTR6', 'NEUROD6', 'NUTM1', 'C2ORF27B', 'HEATR9', 'OR2T2', 'SLC28A2', 'HTR2C', 'KCNJ13', 'LINC01548', 'MYL2', 'FEZF1', 'MYH4', 'TMPRSS7', 'TMEM212', 'LINC00691', 'PRO0611', 'BARHL1', 'LOC285629', 'PATE3', 'SNORA72', 'OR5M1', 'TSHB', 'HILS1', 'C1ORF140', 'RFPL1', 'SNORA61', 'CDH19', 'SNORA5C', 'LOC644669', 'NYAP2', 'CLRN1', 'SALL3', 'GRM7', 'GCKR', 'TPTE2', 'ADGRE3', 'LRRC52', 'LRRIQ4', 'WFDC6', 'KRT12', 'CAPZA3', 'FAM71E2', 'C14ORF178', 'ADH6', 'PRTN3', 'LRRC74A', 'OR12D3', 'FNDC9', 'C5ORF47', 'A1CF', 'OR10R2', 'ZIC5', 'C12ORF56', 'PAGE2', 'C9ORF171', 'FSHR', 'OPRM1', 'OR4F17', 'KAAG1', 'CTXN3', 'CTRB2', 'OR5K1', 'FRG2DP', 'CAPNS2', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 3.947977000566632e-15 NRMSE: 7.956903884891534e-16 MAPE: 3.5603132810827935e-12 Pearson Correlation: 0.27269172898732946 Spearman Correlation: 0.2576236464735148 Coefficient of Determination: -2.0721752549068677 RMSE: 1.3162503718165306 NRMSE: 0.3265643754816977 MAPE: 797.7032032831576 Predictor: ElasticNet Pearson Correlation: 0.8792757937027341 Spearman Correlation: 0.8830628059030176 Coefficient of Determination: 0.722208092331891 RMSE: 0.3885669316993077 NRMSE: 0.07831326595709288 MAPE: 215.9553304458755 Pearson Correlation: 0.28433439057008136 Spearman Correlation: 0.26749097649009856 Coefficient of Determination: 0.0006506429405107594 RMSE: 0.7507134245952714 NRMSE: 0.18625351674571314 MAPE: 262.30595395059066 Predictor: RandomForests Pearson Correlation: 0.5977801955491041 Spearman Correlation: 0.5760015944865297 Coefficient of Determination: 0.18928163661016506 RMSE: 0.6638058080366055 NRMSE: 0.13378596207682963 MAPE: 555.2554119705992 Pearson Correlation: 0.44360238056235424 Spearman Correlation: 0.40000487757291975 Coefficient of Determination: 0.10915491354411755 RMSE: 0.7087884108818361 NRMSE: 0.17585183617373 MAPE: 299.3884024264422 Protein: CCNE1 x_train_column_count: 1002 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'OR6C74', 'GYS2', 'IQCF6', 'IL13', 'ANKRD18DP', 'C10ORF53', 'LINC00469', 'LINC00696', 'LINC00895', 'CYP11B2', 'ADAM18', 'TCP10L2', 'C17ORF78', 'SNORA5B', 'FMO6P', 'PLET1', 'SCARNA11', 'LY6G6D', 'CGB5', 'POTEH', 'CLCA4', 'PLG', 'SST', 'TPD52L3', 'ZNF479', 'OR8B3', 'TMPRSS11F', 'TAAR9', 'OR2A2', 'F13B', 'SNORD89', 'OR1S2', 'OR5H14', 'ZCCHC13', 'OLAH', 'OPRD1', 'OR4D6', 'NOX3', 'LEUTX', 'VWC2L', 'EPS8L3', 'RPL13AP17', 'RAX2', 'DPPA5', 'KRTAP4-5', 'OR5T2', 'PRDM14', 'LOC285627', 'TKTL2', 'C18ORF42', 'OR10V1', 'OR2G2', 'OR8A1', 'SNORA71A', 'ZPBP', 'GPR78', 'FCAMR', 'BEND2', 'ACTRT2', 'TSGA13', 'SLC1A6', 'TTTY14', 'CST11', 'SSX5', 'STATH', 'CT45A1', 'OR5H6', 'IL26', 'LIPN', 'SPANXA2', 'OR6M1', 'ASB17', 'LINC01205', 'OR9G4', 'ACTR3BP2', 'SNORA74A', 'BARHL2', 'OR8D4', 'RTP2', 'LMNTD1', 'KLK9', 'OR4C12', 'LCNL1', 'TMEM202', 'OR11H4', 'OR2L8', 'GAGE2B', 'LOC145845', 'HNRNPCL1', 'KRTAP21-2', 'SERPINB3', 'DEFB110', 'KRT85', 'PWAR4', 'MYBPC2', 'LOC646813', 'C2ORF83', 'GPR52', 'PROP1', 'SSX8', 'LPO', 'NCOR1P1', 'SPATA31C1', 'ANKUB1', 'LINC00488', 'GOT1L1', 'OR2M4', 'LOC100129935', 'USP26', 'OR4C16', 'LINC00934', 'ZIM3', 'BPIFA3', 'DYDC1', 'FAM27B', 'COL6A4P1', 'TEX13B', 'CABS1', 'UGT2A3', 'OR4D9', 'FAM138D', 'ZAR1', 'FOXN3-AS2', 'POTED', 'CPLX4', 'SYCN', 'OR2M7', 'GSTA5', 'HIST1H4F', 'OR2T35', 'DUXA', 'SLC32A1', 'OR4K17', 'SLC38A8', 'TBC1D3P2', 'LINC00114', 'HTR3E', 'C3ORF30', 'KRTAP19-2', 'ASB18', 'CLRN2', 'RGS8', 'TMEM72', 'RBPJL', 'TRHR', 'HBD', 'CTRB1', 'B3GNT6', 'GABRG3', 'DAOA', 'WFDC8', 'DEFB104A', 'FRMPD4', 'LINC01565', 'KRTAP6-1', 'KRTAP25-1', 'HSFY2', 'EPPIN', 'LINC00608', 'OR56A1', 'OR6Y1', 'OR7A17', 'OR8H2', 'IL31', 'FBXW12', 'ALLC', 'OR4K2', 'OR4X2', 'GRIN2B', 'PRAMEF20', 'OR8G2', 'MYF5', 'LINC01566', 'KIR3DL3', 'MMD2', 'ITIH1', 'MAGEB3', 'ABRA', 'TCERG1L', 'OR8J3', 'CYLC2', 'SLC25A31', 'FAM169B', 'LINC00113', 'LOC729609', 'BMP15', 'FAM74A3', 'CFHR4', 'DEFB126', 'DEFB129', 'DEFB134', 'OR6B3', 'OR2AT4', 'FAM170B', 'INS', 'RHAG', 'CT47A1', 'CSNK1A1P1', 'OTOP1', 'GAGE12F', 'SRY', 'NKAIN3', 'PSKH2', 'MYH1', 'CCK', 'TCP10', 'SNORA70B', 'OR52H1', 'CD200R1L', 'OR5P3', 'REG4', 'POU6F2', 'TRPV5', 'KRTAP10-3', 'GPRC6A', 'ODF3', 'SPINK1', 'SCARNA8', 'FTHL17', 'ZNF705A', 'HOXC12', 'OR6B2', 'AQP2', 'KRTAP11-1', 'OR10H2', 'OR51I2', 'SNORA47', 'ACOT12', 'LCN9', 'DISC2', 'GUCY2EP', 'FGF6', 'TFF2', 'CHIAP2', 'CXADRP2', 'SNORA38B', 'C20ORF166-AS1', 'SNORD94', 'TMEM88B', 'OR4S1', 'OR5M10', 'MGC27382', 'MBD3L5', 'CNTN5', 'PYDC2', 'SNORA59B', 'ENAM', 'FIGLA', 'CCDC37', 'PCGEM1', 'PSG11', 'OR5AN1', 'OR6F1', 'OR14I1', 'SNORD115-26', 'LOC392196', 'SNCB', 'PISRT1', 'BOLL', 'OR7C2', 'SPATA19', 'TTTY8', 'TTTY9B', 'NANOS2', 'AVPR1B', 'XAGE3', 'CNGB1', 'MOGAT3', 'OR2T12', 'NLRP8', 'KRTAP10-7', 'MAGEA1', 'SLC51B', 'CYP2C18', 'CNTNAP4', 'UGT1A4', 'TAS2R60', 'OPN1MW', 'RESP18', 'RPL3L', 'OACYLP', 'IHH', 'LRRTM1', 'SLC17A6', 'MAGEB6', 'SNAR-F', 'MAGEA5', 'CLEC4G', 'PRAMEF1', 'PRDM9', 'SPDYC', 'SPRR2C', 'GRK1', 'KRTAP2-1', 'DNTT', 'KRTAP19-6', 'FOXR1', 'OR6K6', 'APCS', 'SFTPC', 'BSX', 'NEU2', 'PAQR9', 'OR5M3', 'KCNIP4-IT1', 'SLC6A5', 'MUSK', 'PAPOLB', 'CNGA2', 'IL17F', 'SLC2A2', 'GOLGA6L1', 'C10ORF120', 'ZFY', 'F9', 'CALR3', 'ANP32D', 'KRTAP10-12', 'C11ORF94', 'CA6', 'APOA2', 'CCDC166', 'HAO1', 'LINC00304', 'DEFB123', 'PPIAL4E', 'KGFLP1', 'SFTPB', 'LINC00575', 'OR5M8', 'ALX4', 'DKFZP434K028', 'EPB42', 'HCRTR1', 'SPANXN3', 'IZUMO1R', 'KRT3', 'OR4D11', 'KRTAP3-2', 'OR52R1', 'SSX9', 'LELP1', 'CRYGB', 'FTMT', 'OTOL1', 'AWAT1', 'OR7E24', 'LINC00410', 'LINC01553', 'BTN1A1', 'KRT25', 'PLA2G12B', 'KRTAP10-11', 'SCN1A', 'OR1K1', 'C16ORF90', 'ANXA10', 'KRTAP13-1', 'GABRR3', 'PROKR2', 'CELA2B', 'MT4', 'OR12D2', 'C12ORF77', 'COX7B2', 'ALPPL2', 'ZNF679', 'FKBP6', 'FOXD4L3', 'IQCJ', 'OR1E2', 'LGALS14', 'OR4D5', 'TMEM14E', 'PRR32', 'OR2T10', 'HBE1', 'NXNL1', 'PRB4', 'LOC286238', 'LINC01591', 'AADACL3', 'PRAMEF16', 'AGXT2', 'AKR1C8P', 'TMPRSS11BNL', 'SCTR', 'BANF2', 'BTF3P11', 'RPS4Y2', 'CDX4', 'SLC36A3', 'CHAT', 'OR4K5', 'OR10W1', 'MTNR1B', 'YIPF7', 'SPACA3', 'LYZL1', 'TNP1', 'EPGN', 'NEUROD1', 'KRTAP9-2', 'SVOP', 'SLC5A8', 'ANGPTL3', 'SPRR2E', 'OR2G6', 'INSC', 'OR51B5', 'NCAN', 'OR7D4', 'OR2M3', 'PLCZ1', 'SLC10A1', 'LINC01142', 'DAW1', 'OR6A2', 'AADAC', 'NKX2-3', 'TRIM49', 'ACSM2B', 'GBA3', 'ITPK1-AS1', 'OCSTAMP', 'BCYRN1', 'CETN1', 'HIST1H3B', 'SNORA16B', 'GKN2', 'EDDM3B', 'PCSK2', 'HIST1H4B', 'FAM170A', 'HULC', 'LOC647859', 'MCF2', 'RSPH6A', 'C1ORF141', 'C1ORF94', 'OR5B17', 'OR4D10', 'CTRC', 'KRTAP1-3', 'SLC9C1', 'PTH2', 'BET1P1', 'SHH', 'GPHA2', 'OR10AG1', 'C12ORF50', 'ZSCAN10', 'LHX3', 'OR10G8', 'PRAC1', 'PSG4', 'DEFB119', 'HS3ST4', 'PRG1', 'IL3', 'GUCY2F', 'DMRT1', 'LINC00520', 'OR1M1', 'OR1N1', 'OR1S1', 'NLRP13', 'UGT2B28', 'FAM47C', 'MMP23A', 'KRT71', 'TDRG1', 'FAM138B', 'NXPE1', 'FAM150A', 'AMER3', 'PCDH8', 'GCGR', 'NPSR1-AS1', 'ARL13A', 'DRD3', 'HSD52', 'TARM1', 'TCEB3C', 'LINC00202-2', 'SH2D7', 'IGFBP1', 'OR5E1P', 'OR2B3', 'OR5H2', 'SNORA27', 'SLCO6A1', 'CALCB', 'TMEM8C', 'GABRA4', 'SNORD15B', 'LINC00479', 'LOC284798', 'CHRNB3', 'HGC6.3', 'CCKAR', 'XKR7', 'ISL1', 'MRGPRG-AS1', 'CGB8', 'SNORA36B', 'LINC00523', 'MYH7', 'CGB2', 'GUCA1C', 'NEUROG3', 'PRSS57', 'FAM71B', 'VWA5B1', 'PROKR1', 'SLCO1B7', 'VGLL2', 'UBE2DNL', 'NKX6-2', 'PRKY', 'CACNG7', 'GH1', 'CCER1', 'PPP1R2P9', 'TRPM3', 'C7ORF72', 'IL36A', 'BPIFB4', 'UGT2B10', 'USP50', 'MTVR2', 'MUC13', 'LINC00032', 'FGF23', 'OR4K1', 'KRTAP12-2', 'OR52N2', 'DEFB118', 'KRTAP1-5', 'DEFB115', 'AIRE', 'RNF151', 'EXD1', 'FGF16', 'APOA5', 'PASD1', 'SNORA77', 'OR2A14', 'POU4F3', 'SYT14P1', 'HTR1A', 'FMO9P', 'SNORD97', 'ZFAT-AS1', 'B4GALNT2', 'OLFM3', 'HMSD', 'OR2B11', 'FOXE3', 'OR10K1', 'LINC00923', 'OR1L4', 'DSCR10', 'KDM5D', 'ANKRD34C', 'CHRNA9', 'DPRX', 'POU4F2', 'KRTAP3-3', 'MYADML', 'SFTA3', 'OR52K2', 'HCRTR2', 'PTCHD3', 'LINC00710', 'OR1L1', 'MEP1A', 'FAM9B', 'SNORA2B', 'MAGEA9B', 'KRTAP12-1', 'LINC00964', 'OTC', 'GPR148', 'MYH16', 'PACRG-AS1', 'C12ORF42', 'ITLN2', 'OTOR', 'SPATA3', 'OR10AD1', 'HIST1H3F', 'LOC100129055', 'PLD5', 'LOC100132831', 'FAM83A-AS1', 'ARID3C', 'IGLL1', 'C11ORF87', 'MYL1', 'LINC00052', 'OVCH1', 'NPSR1', 'CLEC18C', 'MIR1-1HG', 'TMSB4Y', 'POM121L2', 'HRK', 'CDH10', 'VIL1', 'CLEC4M', 'SNORA64', 'SLC39A12', 'VCX3A', 'CLRN1-AS1', 'OR51F2', 'CMTM5', 'PSG3', 'HTR4', 'HPVC1', 'OR2M2', 'LOC100130264', 'C4ORF50', 'SOX3', 'HIST2H2AB', 'C7ORF57', 'ATOH7', 'AATK-AS1', 'CPA2', 'SPINK14', 'FERD3L', 'TSNAX-DISC1', 'H3F3AP5', 'OR5AR1', 'KRTAP4-8', 'CYP2W1', 'C15ORF43', 'C20ORF144', 'NF1P2', 'KLK12', 'DEFB108B', 'IFNA21', 'OR13C3', 'PPP1R3A', 'PRSS48', 'ADGRG7', 'ADAMTS20', 'CACNG3', 'KRTAP10-1', 'SNORA68', 'MBL2', 'PGA4', 'CXCL6', 'SLC12A1', 'COL20A1', 'KRT18P55', 'PRKAG3', 'S100A7', 'KRT73', 'LINC01101', 'LOC100130417', 'CELP', 'SNORA44', 'CLCA3P', 'LRRC30', 'TMPRSS11B', 'KRTAP7-1', 'SCARNA1', 'XIRP2', 'MCHR2', 'MMP21', 'PTX4', 'FAM19A1', 'MGC16025', 'SLURP1', 'TBX20', 'CCDC54', 'FFAR1', 'KRTAP5-2', 'FER1L6', 'HSFY1P1', 'GSX2', 'PPY2P', 'HTR6', 'NEUROD6', 'NUTM1', 'C2ORF27B', 'HEATR9', 'OR2T2', 'SLC28A2', 'HTR2C', 'KCNJ13', 'LINC01548', 'MYL2', 'FEZF1', 'MYH4', 'TMPRSS7', 'TMEM212', 'LINC00691', 'PRO0611', 'BARHL1', 'LOC285629', 'PATE3', 'SNORA72', 'OR5M1', 'TSHB', 'HILS1', 'C1ORF140', 'RFPL1', 'SNORA61', 'CDH19', 'SNORA5C', 'LOC644669', 'NYAP2', 'CLRN1', 'SALL3', 'GRM7', 'GCKR', 'TPTE2', 'ADGRE3', 'LRRC52', 'LRRIQ4', 'WFDC6', 'KRT12', 'CAPZA3', 'FAM71E2', 'C14ORF178', 'ADH6', 'PRTN3', 'LRRC74A', 'OR12D3', 'FNDC9', 'C5ORF47', 'A1CF', 'OR10R2', 'ZIC5', 'C12ORF56', 'PAGE2', 'C9ORF171', 'FSHR', 'OPRM1', 'OR4F17', 'KAAG1', 'CTXN3', 'CTRB2', 'OR5K1', 'FRG2DP', 'CAPNS2', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 1.9008509777443567e-15 NRMSE: 4.587327696851502e-16 MAPE: 2.868513489572296e-13 Pearson Correlation: 0.4426948102639665 Spearman Correlation: 0.40726270607745585 Coefficient of Determination: 0.03987822436537114 RMSE: 0.5262229799292881 NRMSE: 0.18743472125709282 MAPE: 97.9402269682339 Predictor: ElasticNet Pearson Correlation: 0.925358681617381 Spearman Correlation: 0.8251572565857528 Coefficient of Determination: 0.8401156138148751 RMSE: 0.19339855266569833 NRMSE: 0.046672913740304155 MAPE: 61.62720214236277 Pearson Correlation: 0.7693260392338592 Spearman Correlation: 0.60085845283387 Coefficient of Determination: 0.5414125384761628 RMSE: 0.3636785927955316 NRMSE: 0.12953823429938793 MAPE: 63.48412401091689 Predictor: RandomForests Pearson Correlation: 0.8580120880533392 Spearman Correlation: 0.7209157912952483 Coefficient of Determination: 0.7295389403040076 RMSE: 0.2515373987055415 NRMSE: 0.060703573788049685 MAPE: 54.71173736187718 Pearson Correlation: 0.8416347706632035 Spearman Correlation: 0.7058950995480469 Coefficient of Determination: 0.7044269775527919 RMSE: 0.2919705487414834 NRMSE: 0.10399663356775901 MAPE: 43.39122780357401 Protein: CCND1 x_train_column_count: 1002 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'OR6C74', 'GYS2', 'IQCF6', 'IL13', 'ANKRD18DP', 'C10ORF53', 'LINC00469', 'LINC00696', 'LINC00895', 'CYP11B2', 'ADAM18', 'TCP10L2', 'C17ORF78', 'SNORA5B', 'FMO6P', 'PLET1', 'SCARNA11', 'LY6G6D', 'CGB5', 'POTEH', 'CLCA4', 'PLG', 'SST', 'TPD52L3', 'ZNF479', 'OR8B3', 'TMPRSS11F', 'TAAR9', 'OR2A2', 'F13B', 'SNORD89', 'OR1S2', 'OR5H14', 'ZCCHC13', 'OLAH', 'OPRD1', 'OR4D6', 'NOX3', 'LEUTX', 'VWC2L', 'EPS8L3', 'RPL13AP17', 'RAX2', 'DPPA5', 'KRTAP4-5', 'OR5T2', 'PRDM14', 'LOC285627', 'TKTL2', 'C18ORF42', 'OR10V1', 'OR2G2', 'OR8A1', 'SNORA71A', 'ZPBP', 'GPR78', 'FCAMR', 'BEND2', 'ACTRT2', 'TSGA13', 'SLC1A6', 'TTTY14', 'CST11', 'SSX5', 'STATH', 'CT45A1', 'OR5H6', 'IL26', 'LIPN', 'SPANXA2', 'OR6M1', 'ASB17', 'LINC01205', 'OR9G4', 'ACTR3BP2', 'SNORA74A', 'BARHL2', 'OR8D4', 'RTP2', 'LMNTD1', 'KLK9', 'OR4C12', 'LCNL1', 'TMEM202', 'OR11H4', 'OR2L8', 'GAGE2B', 'LOC145845', 'HNRNPCL1', 'KRTAP21-2', 'SERPINB3', 'DEFB110', 'KRT85', 'PWAR4', 'MYBPC2', 'LOC646813', 'C2ORF83', 'GPR52', 'PROP1', 'SSX8', 'LPO', 'NCOR1P1', 'SPATA31C1', 'ANKUB1', 'LINC00488', 'GOT1L1', 'OR2M4', 'LOC100129935', 'USP26', 'OR4C16', 'LINC00934', 'ZIM3', 'BPIFA3', 'DYDC1', 'FAM27B', 'COL6A4P1', 'TEX13B', 'CABS1', 'UGT2A3', 'OR4D9', 'FAM138D', 'ZAR1', 'FOXN3-AS2', 'POTED', 'CPLX4', 'SYCN', 'OR2M7', 'GSTA5', 'HIST1H4F', 'OR2T35', 'DUXA', 'SLC32A1', 'OR4K17', 'SLC38A8', 'TBC1D3P2', 'LINC00114', 'HTR3E', 'C3ORF30', 'KRTAP19-2', 'ASB18', 'CLRN2', 'RGS8', 'TMEM72', 'RBPJL', 'TRHR', 'HBD', 'CTRB1', 'B3GNT6', 'GABRG3', 'DAOA', 'WFDC8', 'DEFB104A', 'FRMPD4', 'LINC01565', 'KRTAP6-1', 'KRTAP25-1', 'HSFY2', 'EPPIN', 'LINC00608', 'OR56A1', 'OR6Y1', 'OR7A17', 'OR8H2', 'IL31', 'FBXW12', 'ALLC', 'OR4K2', 'OR4X2', 'GRIN2B', 'PRAMEF20', 'OR8G2', 'MYF5', 'LINC01566', 'KIR3DL3', 'MMD2', 'ITIH1', 'MAGEB3', 'ABRA', 'TCERG1L', 'OR8J3', 'CYLC2', 'SLC25A31', 'FAM169B', 'LINC00113', 'LOC729609', 'BMP15', 'FAM74A3', 'CFHR4', 'DEFB126', 'DEFB129', 'DEFB134', 'OR6B3', 'OR2AT4', 'FAM170B', 'INS', 'RHAG', 'CT47A1', 'CSNK1A1P1', 'OTOP1', 'GAGE12F', 'SRY', 'NKAIN3', 'PSKH2', 'MYH1', 'CCK', 'TCP10', 'SNORA70B', 'OR52H1', 'CD200R1L', 'OR5P3', 'REG4', 'POU6F2', 'TRPV5', 'KRTAP10-3', 'GPRC6A', 'ODF3', 'SPINK1', 'SCARNA8', 'FTHL17', 'ZNF705A', 'HOXC12', 'OR6B2', 'AQP2', 'KRTAP11-1', 'OR10H2', 'OR51I2', 'SNORA47', 'ACOT12', 'LCN9', 'DISC2', 'GUCY2EP', 'FGF6', 'TFF2', 'CHIAP2', 'CXADRP2', 'SNORA38B', 'C20ORF166-AS1', 'SNORD94', 'TMEM88B', 'OR4S1', 'OR5M10', 'MGC27382', 'MBD3L5', 'CNTN5', 'PYDC2', 'SNORA59B', 'ENAM', 'FIGLA', 'CCDC37', 'PCGEM1', 'PSG11', 'OR5AN1', 'OR6F1', 'OR14I1', 'SNORD115-26', 'LOC392196', 'SNCB', 'PISRT1', 'BOLL', 'OR7C2', 'SPATA19', 'TTTY8', 'TTTY9B', 'NANOS2', 'AVPR1B', 'XAGE3', 'CNGB1', 'MOGAT3', 'OR2T12', 'NLRP8', 'KRTAP10-7', 'MAGEA1', 'SLC51B', 'CYP2C18', 'CNTNAP4', 'UGT1A4', 'TAS2R60', 'OPN1MW', 'RESP18', 'RPL3L', 'OACYLP', 'IHH', 'LRRTM1', 'SLC17A6', 'MAGEB6', 'SNAR-F', 'MAGEA5', 'CLEC4G', 'PRAMEF1', 'PRDM9', 'SPDYC', 'SPRR2C', 'GRK1', 'KRTAP2-1', 'DNTT', 'KRTAP19-6', 'FOXR1', 'OR6K6', 'APCS', 'SFTPC', 'BSX', 'NEU2', 'PAQR9', 'OR5M3', 'KCNIP4-IT1', 'SLC6A5', 'MUSK', 'PAPOLB', 'CNGA2', 'IL17F', 'SLC2A2', 'GOLGA6L1', 'C10ORF120', 'ZFY', 'F9', 'CALR3', 'ANP32D', 'KRTAP10-12', 'C11ORF94', 'CA6', 'APOA2', 'CCDC166', 'HAO1', 'LINC00304', 'DEFB123', 'PPIAL4E', 'KGFLP1', 'SFTPB', 'LINC00575', 'OR5M8', 'ALX4', 'DKFZP434K028', 'EPB42', 'HCRTR1', 'SPANXN3', 'IZUMO1R', 'KRT3', 'OR4D11', 'KRTAP3-2', 'OR52R1', 'SSX9', 'LELP1', 'CRYGB', 'FTMT', 'OTOL1', 'AWAT1', 'OR7E24', 'LINC00410', 'LINC01553', 'BTN1A1', 'KRT25', 'PLA2G12B', 'KRTAP10-11', 'SCN1A', 'OR1K1', 'C16ORF90', 'ANXA10', 'KRTAP13-1', 'GABRR3', 'PROKR2', 'CELA2B', 'MT4', 'OR12D2', 'C12ORF77', 'COX7B2', 'ALPPL2', 'ZNF679', 'FKBP6', 'FOXD4L3', 'IQCJ', 'OR1E2', 'LGALS14', 'OR4D5', 'TMEM14E', 'PRR32', 'OR2T10', 'HBE1', 'NXNL1', 'PRB4', 'LOC286238', 'LINC01591', 'AADACL3', 'PRAMEF16', 'AGXT2', 'AKR1C8P', 'TMPRSS11BNL', 'SCTR', 'BANF2', 'BTF3P11', 'RPS4Y2', 'CDX4', 'SLC36A3', 'CHAT', 'OR4K5', 'OR10W1', 'MTNR1B', 'YIPF7', 'SPACA3', 'LYZL1', 'TNP1', 'EPGN', 'NEUROD1', 'KRTAP9-2', 'SVOP', 'SLC5A8', 'ANGPTL3', 'SPRR2E', 'OR2G6', 'INSC', 'OR51B5', 'NCAN', 'OR7D4', 'OR2M3', 'PLCZ1', 'SLC10A1', 'LINC01142', 'DAW1', 'OR6A2', 'AADAC', 'NKX2-3', 'TRIM49', 'ACSM2B', 'GBA3', 'ITPK1-AS1', 'OCSTAMP', 'BCYRN1', 'CETN1', 'HIST1H3B', 'SNORA16B', 'GKN2', 'EDDM3B', 'PCSK2', 'HIST1H4B', 'FAM170A', 'HULC', 'LOC647859', 'MCF2', 'RSPH6A', 'C1ORF141', 'C1ORF94', 'OR5B17', 'OR4D10', 'CTRC', 'KRTAP1-3', 'SLC9C1', 'PTH2', 'BET1P1', 'SHH', 'GPHA2', 'OR10AG1', 'C12ORF50', 'ZSCAN10', 'LHX3', 'OR10G8', 'PRAC1', 'PSG4', 'DEFB119', 'HS3ST4', 'PRG1', 'IL3', 'GUCY2F', 'DMRT1', 'LINC00520', 'OR1M1', 'OR1N1', 'OR1S1', 'NLRP13', 'UGT2B28', 'FAM47C', 'MMP23A', 'KRT71', 'TDRG1', 'FAM138B', 'NXPE1', 'FAM150A', 'AMER3', 'PCDH8', 'GCGR', 'NPSR1-AS1', 'ARL13A', 'DRD3', 'HSD52', 'TARM1', 'TCEB3C', 'LINC00202-2', 'SH2D7', 'IGFBP1', 'OR5E1P', 'OR2B3', 'OR5H2', 'SNORA27', 'SLCO6A1', 'CALCB', 'TMEM8C', 'GABRA4', 'SNORD15B', 'LINC00479', 'LOC284798', 'CHRNB3', 'HGC6.3', 'CCKAR', 'XKR7', 'ISL1', 'MRGPRG-AS1', 'CGB8', 'SNORA36B', 'LINC00523', 'MYH7', 'CGB2', 'GUCA1C', 'NEUROG3', 'PRSS57', 'FAM71B', 'VWA5B1', 'PROKR1', 'SLCO1B7', 'VGLL2', 'UBE2DNL', 'NKX6-2', 'PRKY', 'CACNG7', 'GH1', 'CCER1', 'PPP1R2P9', 'TRPM3', 'C7ORF72', 'IL36A', 'BPIFB4', 'UGT2B10', 'USP50', 'MTVR2', 'MUC13', 'LINC00032', 'FGF23', 'OR4K1', 'KRTAP12-2', 'OR52N2', 'DEFB118', 'KRTAP1-5', 'DEFB115', 'AIRE', 'RNF151', 'EXD1', 'FGF16', 'APOA5', 'PASD1', 'SNORA77', 'OR2A14', 'POU4F3', 'SYT14P1', 'HTR1A', 'FMO9P', 'SNORD97', 'ZFAT-AS1', 'B4GALNT2', 'OLFM3', 'HMSD', 'OR2B11', 'FOXE3', 'OR10K1', 'LINC00923', 'OR1L4', 'DSCR10', 'KDM5D', 'ANKRD34C', 'CHRNA9', 'DPRX', 'POU4F2', 'KRTAP3-3', 'MYADML', 'SFTA3', 'OR52K2', 'HCRTR2', 'PTCHD3', 'LINC00710', 'OR1L1', 'MEP1A', 'FAM9B', 'SNORA2B', 'MAGEA9B', 'KRTAP12-1', 'LINC00964', 'OTC', 'GPR148', 'MYH16', 'PACRG-AS1', 'C12ORF42', 'ITLN2', 'OTOR', 'SPATA3', 'OR10AD1', 'HIST1H3F', 'LOC100129055', 'PLD5', 'LOC100132831', 'FAM83A-AS1', 'ARID3C', 'IGLL1', 'C11ORF87', 'MYL1', 'LINC00052', 'OVCH1', 'NPSR1', 'CLEC18C', 'MIR1-1HG', 'TMSB4Y', 'POM121L2', 'HRK', 'CDH10', 'VIL1', 'CLEC4M', 'SNORA64', 'SLC39A12', 'VCX3A', 'CLRN1-AS1', 'OR51F2', 'CMTM5', 'PSG3', 'HTR4', 'HPVC1', 'OR2M2', 'LOC100130264', 'C4ORF50', 'SOX3', 'HIST2H2AB', 'C7ORF57', 'ATOH7', 'AATK-AS1', 'CPA2', 'SPINK14', 'FERD3L', 'TSNAX-DISC1', 'H3F3AP5', 'OR5AR1', 'KRTAP4-8', 'CYP2W1', 'C15ORF43', 'C20ORF144', 'NF1P2', 'KLK12', 'DEFB108B', 'IFNA21', 'OR13C3', 'PPP1R3A', 'PRSS48', 'ADGRG7', 'ADAMTS20', 'CACNG3', 'KRTAP10-1', 'SNORA68', 'MBL2', 'PGA4', 'CXCL6', 'SLC12A1', 'COL20A1', 'KRT18P55', 'PRKAG3', 'S100A7', 'KRT73', 'LINC01101', 'LOC100130417', 'CELP', 'SNORA44', 'CLCA3P', 'LRRC30', 'TMPRSS11B', 'KRTAP7-1', 'SCARNA1', 'XIRP2', 'MCHR2', 'MMP21', 'PTX4', 'FAM19A1', 'MGC16025', 'SLURP1', 'TBX20', 'CCDC54', 'FFAR1', 'KRTAP5-2', 'FER1L6', 'HSFY1P1', 'GSX2', 'PPY2P', 'HTR6', 'NEUROD6', 'NUTM1', 'C2ORF27B', 'HEATR9', 'OR2T2', 'SLC28A2', 'HTR2C', 'KCNJ13', 'LINC01548', 'MYL2', 'FEZF1', 'MYH4', 'TMPRSS7', 'TMEM212', 'LINC00691', 'PRO0611', 'BARHL1', 'LOC285629', 'PATE3', 'SNORA72', 'OR5M1', 'TSHB', 'HILS1', 'C1ORF140', 'RFPL1', 'SNORA61', 'CDH19', 'SNORA5C', 'LOC644669', 'NYAP2', 'CLRN1', 'SALL3', 'GRM7', 'GCKR', 'TPTE2', 'ADGRE3', 'LRRC52', 'LRRIQ4', 'WFDC6', 'KRT12', 'CAPZA3', 'FAM71E2', 'C14ORF178', 'ADH6', 'PRTN3', 'LRRC74A', 'OR12D3', 'FNDC9', 'C5ORF47', 'A1CF', 'OR10R2', 'ZIC5', 'C12ORF56', 'PAGE2', 'C9ORF171', 'FSHR', 'OPRM1', 'OR4F17', 'KAAG1', 'CTXN3', 'CTRB2', 'OR5K1', 'FRG2DP', 'CAPNS2', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.0984896320052717e-15 NRMSE: 6.603801998324366e-16 MAPE: 1.879926559116168e-12 Pearson Correlation: 0.29912945040824096 Spearman Correlation: 0.2958345527265633 Coefficient of Determination: -2.1434614039204196 RMSE: 0.4165571195259064 NRMSE: 0.29667620044862575 MAPE: 1820.4766081815142 Predictor: ElasticNet Pearson Correlation: 0.7212617857185777 Spearman Correlation: 0.6893420303987354 Coefficient of Determination: 0.4422857306742026 RMSE: 0.17840668853133182 NRMSE: 0.10725294184952197 MAPE: 292.8033592932196 Pearson Correlation: 0.48885754824420147 Spearman Correlation: 0.42598770851624235 Coefficient of Determination: 0.2316931322436394 RMSE: 0.20593864599351333 NRMSE: 0.1466715899332754 MAPE: 987.80135169273 Predictor: RandomForests Pearson Correlation: 0.5390986966397793 Spearman Correlation: 0.5288892825510736 Coefficient of Determination: 0.2446199025489333 RMSE: 0.2076290051622355 NRMSE: 0.12482055353562872 MAPE: 325.76463739951527 Pearson Correlation: 0.5193995790516281 Spearman Correlation: 0.49054238610867235 Coefficient of Determination: 0.24323355036122685 RMSE: 0.20438613462635616 NRMSE: 0.14556587560990553 MAPE: 1025.0420213515517 Protein: ERBB2 x_train_column_count: 1002 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'OR6C74', 'GYS2', 'IQCF6', 'IL13', 'ANKRD18DP', 'C10ORF53', 'LINC00469', 'LINC00696', 'LINC00895', 'CYP11B2', 'ADAM18', 'TCP10L2', 'C17ORF78', 'SNORA5B', 'FMO6P', 'PLET1', 'SCARNA11', 'LY6G6D', 'CGB5', 'POTEH', 'CLCA4', 'PLG', 'SST', 'TPD52L3', 'ZNF479', 'OR8B3', 'TMPRSS11F', 'TAAR9', 'OR2A2', 'F13B', 'SNORD89', 'OR1S2', 'OR5H14', 'ZCCHC13', 'OLAH', 'OPRD1', 'OR4D6', 'NOX3', 'LEUTX', 'VWC2L', 'EPS8L3', 'RPL13AP17', 'RAX2', 'DPPA5', 'KRTAP4-5', 'OR5T2', 'PRDM14', 'LOC285627', 'TKTL2', 'C18ORF42', 'OR10V1', 'OR2G2', 'OR8A1', 'SNORA71A', 'ZPBP', 'GPR78', 'FCAMR', 'BEND2', 'ACTRT2', 'TSGA13', 'SLC1A6', 'TTTY14', 'CST11', 'SSX5', 'STATH', 'CT45A1', 'OR5H6', 'IL26', 'LIPN', 'SPANXA2', 'OR6M1', 'ASB17', 'LINC01205', 'OR9G4', 'ACTR3BP2', 'SNORA74A', 'BARHL2', 'OR8D4', 'RTP2', 'LMNTD1', 'KLK9', 'OR4C12', 'LCNL1', 'TMEM202', 'OR11H4', 'OR2L8', 'GAGE2B', 'LOC145845', 'HNRNPCL1', 'KRTAP21-2', 'SERPINB3', 'DEFB110', 'KRT85', 'PWAR4', 'MYBPC2', 'LOC646813', 'C2ORF83', 'GPR52', 'PROP1', 'SSX8', 'LPO', 'NCOR1P1', 'SPATA31C1', 'ANKUB1', 'LINC00488', 'GOT1L1', 'OR2M4', 'LOC100129935', 'USP26', 'OR4C16', 'LINC00934', 'ZIM3', 'BPIFA3', 'DYDC1', 'FAM27B', 'COL6A4P1', 'TEX13B', 'CABS1', 'UGT2A3', 'OR4D9', 'FAM138D', 'ZAR1', 'FOXN3-AS2', 'POTED', 'CPLX4', 'SYCN', 'OR2M7', 'GSTA5', 'HIST1H4F', 'OR2T35', 'DUXA', 'SLC32A1', 'OR4K17', 'SLC38A8', 'TBC1D3P2', 'LINC00114', 'HTR3E', 'C3ORF30', 'KRTAP19-2', 'ASB18', 'CLRN2', 'RGS8', 'TMEM72', 'RBPJL', 'TRHR', 'HBD', 'CTRB1', 'B3GNT6', 'GABRG3', 'DAOA', 'WFDC8', 'DEFB104A', 'FRMPD4', 'LINC01565', 'KRTAP6-1', 'KRTAP25-1', 'HSFY2', 'EPPIN', 'LINC00608', 'OR56A1', 'OR6Y1', 'OR7A17', 'OR8H2', 'IL31', 'FBXW12', 'ALLC', 'OR4K2', 'OR4X2', 'GRIN2B', 'PRAMEF20', 'OR8G2', 'MYF5', 'LINC01566', 'KIR3DL3', 'MMD2', 'ITIH1', 'MAGEB3', 'ABRA', 'TCERG1L', 'OR8J3', 'CYLC2', 'SLC25A31', 'FAM169B', 'LINC00113', 'LOC729609', 'BMP15', 'FAM74A3', 'CFHR4', 'DEFB126', 'DEFB129', 'DEFB134', 'OR6B3', 'OR2AT4', 'FAM170B', 'INS', 'RHAG', 'CT47A1', 'CSNK1A1P1', 'OTOP1', 'GAGE12F', 'SRY', 'NKAIN3', 'PSKH2', 'MYH1', 'CCK', 'TCP10', 'SNORA70B', 'OR52H1', 'CD200R1L', 'OR5P3', 'REG4', 'POU6F2', 'TRPV5', 'KRTAP10-3', 'GPRC6A', 'ODF3', 'SPINK1', 'SCARNA8', 'FTHL17', 'ZNF705A', 'HOXC12', 'OR6B2', 'AQP2', 'KRTAP11-1', 'OR10H2', 'OR51I2', 'SNORA47', 'ACOT12', 'LCN9', 'DISC2', 'GUCY2EP', 'FGF6', 'TFF2', 'CHIAP2', 'CXADRP2', 'SNORA38B', 'C20ORF166-AS1', 'SNORD94', 'TMEM88B', 'OR4S1', 'OR5M10', 'MGC27382', 'MBD3L5', 'CNTN5', 'PYDC2', 'SNORA59B', 'ENAM', 'FIGLA', 'CCDC37', 'PCGEM1', 'PSG11', 'OR5AN1', 'OR6F1', 'OR14I1', 'SNORD115-26', 'LOC392196', 'SNCB', 'PISRT1', 'BOLL', 'OR7C2', 'SPATA19', 'TTTY8', 'TTTY9B', 'NANOS2', 'AVPR1B', 'XAGE3', 'CNGB1', 'MOGAT3', 'OR2T12', 'NLRP8', 'KRTAP10-7', 'MAGEA1', 'SLC51B', 'CYP2C18', 'CNTNAP4', 'UGT1A4', 'TAS2R60', 'OPN1MW', 'RESP18', 'RPL3L', 'OACYLP', 'IHH', 'LRRTM1', 'SLC17A6', 'MAGEB6', 'SNAR-F', 'MAGEA5', 'CLEC4G', 'PRAMEF1', 'PRDM9', 'SPDYC', 'SPRR2C', 'GRK1', 'KRTAP2-1', 'DNTT', 'KRTAP19-6', 'FOXR1', 'OR6K6', 'APCS', 'SFTPC', 'BSX', 'NEU2', 'PAQR9', 'OR5M3', 'KCNIP4-IT1', 'SLC6A5', 'MUSK', 'PAPOLB', 'CNGA2', 'IL17F', 'SLC2A2', 'GOLGA6L1', 'C10ORF120', 'ZFY', 'F9', 'CALR3', 'ANP32D', 'KRTAP10-12', 'C11ORF94', 'CA6', 'APOA2', 'CCDC166', 'HAO1', 'LINC00304', 'DEFB123', 'PPIAL4E', 'KGFLP1', 'SFTPB', 'LINC00575', 'OR5M8', 'ALX4', 'DKFZP434K028', 'EPB42', 'HCRTR1', 'SPANXN3', 'IZUMO1R', 'KRT3', 'OR4D11', 'KRTAP3-2', 'OR52R1', 'SSX9', 'LELP1', 'CRYGB', 'FTMT', 'OTOL1', 'AWAT1', 'OR7E24', 'LINC00410', 'LINC01553', 'BTN1A1', 'KRT25', 'PLA2G12B', 'KRTAP10-11', 'SCN1A', 'OR1K1', 'C16ORF90', 'ANXA10', 'KRTAP13-1', 'GABRR3', 'PROKR2', 'CELA2B', 'MT4', 'OR12D2', 'C12ORF77', 'COX7B2', 'ALPPL2', 'ZNF679', 'FKBP6', 'FOXD4L3', 'IQCJ', 'OR1E2', 'LGALS14', 'OR4D5', 'TMEM14E', 'PRR32', 'OR2T10', 'HBE1', 'NXNL1', 'PRB4', 'LOC286238', 'LINC01591', 'AADACL3', 'PRAMEF16', 'AGXT2', 'AKR1C8P', 'TMPRSS11BNL', 'SCTR', 'BANF2', 'BTF3P11', 'RPS4Y2', 'CDX4', 'SLC36A3', 'CHAT', 'OR4K5', 'OR10W1', 'MTNR1B', 'YIPF7', 'SPACA3', 'LYZL1', 'TNP1', 'EPGN', 'NEUROD1', 'KRTAP9-2', 'SVOP', 'SLC5A8', 'ANGPTL3', 'SPRR2E', 'OR2G6', 'INSC', 'OR51B5', 'NCAN', 'OR7D4', 'OR2M3', 'PLCZ1', 'SLC10A1', 'LINC01142', 'DAW1', 'OR6A2', 'AADAC', 'NKX2-3', 'TRIM49', 'ACSM2B', 'GBA3', 'ITPK1-AS1', 'OCSTAMP', 'BCYRN1', 'CETN1', 'HIST1H3B', 'SNORA16B', 'GKN2', 'EDDM3B', 'PCSK2', 'HIST1H4B', 'FAM170A', 'HULC', 'LOC647859', 'MCF2', 'RSPH6A', 'C1ORF141', 'C1ORF94', 'OR5B17', 'OR4D10', 'CTRC', 'KRTAP1-3', 'SLC9C1', 'PTH2', 'BET1P1', 'SHH', 'GPHA2', 'OR10AG1', 'C12ORF50', 'ZSCAN10', 'LHX3', 'OR10G8', 'PRAC1', 'PSG4', 'DEFB119', 'HS3ST4', 'PRG1', 'IL3', 'GUCY2F', 'DMRT1', 'LINC00520', 'OR1M1', 'OR1N1', 'OR1S1', 'NLRP13', 'UGT2B28', 'FAM47C', 'MMP23A', 'KRT71', 'TDRG1', 'FAM138B', 'NXPE1', 'FAM150A', 'AMER3', 'PCDH8', 'GCGR', 'NPSR1-AS1', 'ARL13A', 'DRD3', 'HSD52', 'TARM1', 'TCEB3C', 'LINC00202-2', 'SH2D7', 'IGFBP1', 'OR5E1P', 'OR2B3', 'OR5H2', 'SNORA27', 'SLCO6A1', 'CALCB', 'TMEM8C', 'GABRA4', 'SNORD15B', 'LINC00479', 'LOC284798', 'CHRNB3', 'HGC6.3', 'CCKAR', 'XKR7', 'ISL1', 'MRGPRG-AS1', 'CGB8', 'SNORA36B', 'LINC00523', 'MYH7', 'CGB2', 'GUCA1C', 'NEUROG3', 'PRSS57', 'FAM71B', 'VWA5B1', 'PROKR1', 'SLCO1B7', 'VGLL2', 'UBE2DNL', 'NKX6-2', 'PRKY', 'CACNG7', 'GH1', 'CCER1', 'PPP1R2P9', 'TRPM3', 'C7ORF72', 'IL36A', 'BPIFB4', 'UGT2B10', 'USP50', 'MTVR2', 'MUC13', 'LINC00032', 'FGF23', 'OR4K1', 'KRTAP12-2', 'OR52N2', 'DEFB118', 'KRTAP1-5', 'DEFB115', 'AIRE', 'RNF151', 'EXD1', 'FGF16', 'APOA5', 'PASD1', 'SNORA77', 'OR2A14', 'POU4F3', 'SYT14P1', 'HTR1A', 'FMO9P', 'SNORD97', 'ZFAT-AS1', 'B4GALNT2', 'OLFM3', 'HMSD', 'OR2B11', 'FOXE3', 'OR10K1', 'LINC00923', 'OR1L4', 'DSCR10', 'KDM5D', 'ANKRD34C', 'CHRNA9', 'DPRX', 'POU4F2', 'KRTAP3-3', 'MYADML', 'SFTA3', 'OR52K2', 'HCRTR2', 'PTCHD3', 'LINC00710', 'OR1L1', 'MEP1A', 'FAM9B', 'SNORA2B', 'MAGEA9B', 'KRTAP12-1', 'LINC00964', 'OTC', 'GPR148', 'MYH16', 'PACRG-AS1', 'C12ORF42', 'ITLN2', 'OTOR', 'SPATA3', 'OR10AD1', 'HIST1H3F', 'LOC100129055', 'PLD5', 'LOC100132831', 'FAM83A-AS1', 'ARID3C', 'IGLL1', 'C11ORF87', 'MYL1', 'LINC00052', 'OVCH1', 'NPSR1', 'CLEC18C', 'MIR1-1HG', 'TMSB4Y', 'POM121L2', 'HRK', 'CDH10', 'VIL1', 'CLEC4M', 'SNORA64', 'SLC39A12', 'VCX3A', 'CLRN1-AS1', 'OR51F2', 'CMTM5', 'PSG3', 'HTR4', 'HPVC1', 'OR2M2', 'LOC100130264', 'C4ORF50', 'SOX3', 'HIST2H2AB', 'C7ORF57', 'ATOH7', 'AATK-AS1', 'CPA2', 'SPINK14', 'FERD3L', 'TSNAX-DISC1', 'H3F3AP5', 'OR5AR1', 'KRTAP4-8', 'CYP2W1', 'C15ORF43', 'C20ORF144', 'NF1P2', 'KLK12', 'DEFB108B', 'IFNA21', 'OR13C3', 'PPP1R3A', 'PRSS48', 'ADGRG7', 'ADAMTS20', 'CACNG3', 'KRTAP10-1', 'SNORA68', 'MBL2', 'PGA4', 'CXCL6', 'SLC12A1', 'COL20A1', 'KRT18P55', 'PRKAG3', 'S100A7', 'KRT73', 'LINC01101', 'LOC100130417', 'CELP', 'SNORA44', 'CLCA3P', 'LRRC30', 'TMPRSS11B', 'KRTAP7-1', 'SCARNA1', 'XIRP2', 'MCHR2', 'MMP21', 'PTX4', 'FAM19A1', 'MGC16025', 'SLURP1', 'TBX20', 'CCDC54', 'FFAR1', 'KRTAP5-2', 'FER1L6', 'HSFY1P1', 'GSX2', 'PPY2P', 'HTR6', 'NEUROD6', 'NUTM1', 'C2ORF27B', 'HEATR9', 'OR2T2', 'SLC28A2', 'HTR2C', 'KCNJ13', 'LINC01548', 'MYL2', 'FEZF1', 'MYH4', 'TMPRSS7', 'TMEM212', 'LINC00691', 'PRO0611', 'BARHL1', 'LOC285629', 'PATE3', 'SNORA72', 'OR5M1', 'TSHB', 'HILS1', 'C1ORF140', 'RFPL1', 'SNORA61', 'CDH19', 'SNORA5C', 'LOC644669', 'NYAP2', 'CLRN1', 'SALL3', 'GRM7', 'GCKR', 'TPTE2', 'ADGRE3', 'LRRC52', 'LRRIQ4', 'WFDC6', 'KRT12', 'CAPZA3', 'FAM71E2', 'C14ORF178', 'ADH6', 'PRTN3', 'LRRC74A', 'OR12D3', 'FNDC9', 'C5ORF47', 'A1CF', 'OR10R2', 'ZIC5', 'C12ORF56', 'PAGE2', 'C9ORF171', 'FSHR', 'OPRM1', 'OR4F17', 'KAAG1', 'CTXN3', 'CTRB2', 'OR5K1', 'FRG2DP', 'CAPNS2', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 4.258018008684316e-15 NRMSE: 7.254234473115007e-16 MAPE: 2.9206781171780345e-12 Pearson Correlation: 0.5127073935241745 Spearman Correlation: 0.46574480538484053 Coefficient of Determination: -0.2829501326060857 RMSE: 1.0273810717011198 NRMSE: 0.1905027019657185 MAPE: 994.9854838996929 Predictor: ElasticNet Pearson Correlation: 0.9568254721151448 Spearman Correlation: 0.9013066986297582 Coefficient of Determination: 0.9035251498105099 RMSE: 0.3165480631642966 NRMSE: 0.053929172387736445 MAPE: 451.63292127368095 Pearson Correlation: 0.7475884740960809 Spearman Correlation: 0.5804897083211396 Coefficient of Determination: 0.5497206040877416 RMSE: 0.6086501165180019 NRMSE: 0.11285928361171926 MAPE: 309.6001605633984 Predictor: RandomForests Pearson Correlation: 0.8436152675899347 Spearman Correlation: 0.6441544877546962 Coefficient of Determination: 0.709292726121856 RMSE: 0.5494909618195507 NRMSE: 0.09361482900651664 MAPE: 457.03377138250767 Pearson Correlation: 0.8104858890893567 Spearman Correlation: 0.7275208532144932 Coefficient of Determination: 0.6461025949523009 RMSE: 0.5395918248234716 NRMSE: 0.10005411177887476 MAPE: 324.3230213340426 Protein: ERBB3 x_train_column_count: 1002 x_train columns: ['BCORP1', 'OR5A1', 'CT45A6', 'MS4A5', 'DEFB124', 'OR8K3', 'SNAR-G1', 'OR9K2', 'OR7G3', 'OR52A1', 'MROH5', 'FAM92A1P2', 'SNORA36A', 'HES3', 'TAAR8', 'GJA8', 'TBC1D21', 'SNAR-E', 'OR8I2', 'DEFB113', 'FAM41AY1', 'SNAR-I', 'SNORA58', 'C11ORF40', 'OR51A2', 'CSN2', 'GJA10', 'SMR3B', 'SNORD8', 'CPN1', 'SNAR-A13', 'LRTM1', 'ZNRF4', 'TTTY21', 'LINC00326', 'TMEM247', 'SCP2D1', 'CCDC38', 'ST8SIA3', 'CT47B1', 'C17ORF102', 'SPRR2G', 'CEACAM20', 'ESX1', 'LINC00305', 'SNORA55', 'HYALP1', 'H1FOO', 'FAM224B', 'ANXA8L1', 'SCARNA4', 'GNAT3', 'OR6T1', 'CT47A6', 'CT47A7', 'SPANXN4', 'LINC00671', 'OR7G2', 'KRTAP6-2', 'HIST1H4G', 'OR8H1', 'OC90', 'CFHR2', 'PSG1', 'OR8B8', 'C12ORF40', 'ASB11', 'OR4A47', 'CA5A', 'OR5K3', 'SSX6', 'FAM25BP', 'OR10G4', 'SEC14L3', 'OR10T2', 'SNORA22', 'CCL15-CCL14', 'SCARNA14', 'EIF1AY', 'SNORD115-7', 'GLYCAM1', 'OR4S2', 'KRTAP19-5', 'SPATA31A3', 'SPAM1', 'CD5L', 'LYPD8', 'OR13C9', 'CLCA1', 'NMS', 'C1ORF105', 'SNORD15A', 'SNORA28', 'OR6C2', 'KLHL40', 'SCARNA22', 'BTNL3', 'CST13P', 'CSH2', 'LRRC7', 'KCNU1', 'SNORA20', 'SOX1', 'PLSCR5', 'GPR50', 'LILRP2', 'OR11L1', 'GJD2', 'VSTM2B', 'IFNA14', 'C22ORF42', 'CT47A11', 'LINC00314', 'OR2L2', 'CELA2A', 'SNORA24', 'CXORF51A', 'BRDTP1', 'MAGEB10', 'OR4B1', 'HHLA1', 'HBBP1', 'FAM153C', 'IQCF2', 'TEX33', 'SLC5A7', 'PLA2G2F', 'IGFL4', 'MC2R', 'SOST', 'PPBPP1', 'C4ORF51', 'OR6C4', 'SPRR4', 'NKX2-6', 'PRB1', 'CD300LD', 'OR1B1', 'PIWIL3', 'GPR151', 'RAB9BP1', 'AKAP14', 'DUSP21', 'PRSS3P2', 'TXLNGY', 'OR11H6', 'GABRA6', 'OR5B2', 'NPHS2', 'OR6B1', 'PWRN2', 'SCGB1C1', 'OR2AG1', 'KRT39', 'PGM5-AS1', 'OR14C36', 'OR8G5', 'OR10A5', 'MOS', 'OR8S1', 'GOLGA8EP', 'DDI1', 'PRAMEF8', 'PSAPL1', 'ZNF735', 'ZAR1L', 'DNMT3L', 'OR10S1', 'TTTY15', 'CASC8', 'SNORA51', 'LOC391003', 'USP17L6P', 'TMEM252', 'RNASE8', 'FLJ25758', 'MS4A10', 'DNAJC5G', 'CRYAA', 'CCKBR', 'TFAMP1', 'SNORA54', 'MRGPRX1', 'OR52A5', 'TBC1D28', 'OR52A4P', 'SCARNA20', 'OR4A16', 'KRTAP19-1', 'PABPC1L2A', 'SYT10', 'IFITM5', 'C17ORF64', 'IFNA13', 'ACSM2A', 'MORC1', 'FAM24A', 'NPPC', 'TSPY1', 'CFC1B', 'TSPY2', 'HFE2', 'HAND1', 'LINC00207', 'DAZL', 'PAGE5', 'HMHB1', 'VRTN', 'TGIF2LX', 'FBP2', 'NPBWR2', 'ARL5C', 'OR2W1', 'OR51L1', 'OR2T29', 'KRTAP12-3', 'SNORA34', 'GHSR', 'OR52B4', 'PRAMEF5', 'KHDC1L', 'GDNF', 'EDDM3A', 'OR6S1', 'IGF2BP2-AS1', 'LOC727924', 'CRLF2', 'P2RX3', 'CYP3A4', 'SERPINB4', 'GAGE1', 'OR5H1', 'SNORD116-19', 'SLC25A3P1', 'LINC01020', 'TMIGD1', 'LOC391343', 'FGA', 'SCGB1A1', 'SDR16C6P', 'SYCP1', 'OR9A2', 'PRSS1', 'GAGE2D', 'HTR5A', 'C3ORF49', 'CRNN', 'TTTY2', 'SLC13A1', 'OTX2', 'PF4', 'OR4F15', 'OR6C74', 'GYS2', 'IQCF6', 'IL13', 'ANKRD18DP', 'C10ORF53', 'LINC00469', 'LINC00696', 'LINC00895', 'CYP11B2', 'ADAM18', 'TCP10L2', 'C17ORF78', 'SNORA5B', 'FMO6P', 'PLET1', 'SCARNA11', 'LY6G6D', 'CGB5', 'POTEH', 'CLCA4', 'PLG', 'SST', 'TPD52L3', 'ZNF479', 'OR8B3', 'TMPRSS11F', 'TAAR9', 'OR2A2', 'F13B', 'SNORD89', 'OR1S2', 'OR5H14', 'ZCCHC13', 'OLAH', 'OPRD1', 'OR4D6', 'NOX3', 'LEUTX', 'VWC2L', 'EPS8L3', 'RPL13AP17', 'RAX2', 'DPPA5', 'KRTAP4-5', 'OR5T2', 'PRDM14', 'LOC285627', 'TKTL2', 'C18ORF42', 'OR10V1', 'OR2G2', 'OR8A1', 'SNORA71A', 'ZPBP', 'GPR78', 'FCAMR', 'BEND2', 'ACTRT2', 'TSGA13', 'SLC1A6', 'TTTY14', 'CST11', 'SSX5', 'STATH', 'CT45A1', 'OR5H6', 'IL26', 'LIPN', 'SPANXA2', 'OR6M1', 'ASB17', 'LINC01205', 'OR9G4', 'ACTR3BP2', 'SNORA74A', 'BARHL2', 'OR8D4', 'RTP2', 'LMNTD1', 'KLK9', 'OR4C12', 'LCNL1', 'TMEM202', 'OR11H4', 'OR2L8', 'GAGE2B', 'LOC145845', 'HNRNPCL1', 'KRTAP21-2', 'SERPINB3', 'DEFB110', 'KRT85', 'PWAR4', 'MYBPC2', 'LOC646813', 'C2ORF83', 'GPR52', 'PROP1', 'SSX8', 'LPO', 'NCOR1P1', 'SPATA31C1', 'ANKUB1', 'LINC00488', 'GOT1L1', 'OR2M4', 'LOC100129935', 'USP26', 'OR4C16', 'LINC00934', 'ZIM3', 'BPIFA3', 'DYDC1', 'FAM27B', 'COL6A4P1', 'TEX13B', 'CABS1', 'UGT2A3', 'OR4D9', 'FAM138D', 'ZAR1', 'FOXN3-AS2', 'POTED', 'CPLX4', 'SYCN', 'OR2M7', 'GSTA5', 'HIST1H4F', 'OR2T35', 'DUXA', 'SLC32A1', 'OR4K17', 'SLC38A8', 'TBC1D3P2', 'LINC00114', 'HTR3E', 'C3ORF30', 'KRTAP19-2', 'ASB18', 'CLRN2', 'RGS8', 'TMEM72', 'RBPJL', 'TRHR', 'HBD', 'CTRB1', 'B3GNT6', 'GABRG3', 'DAOA', 'WFDC8', 'DEFB104A', 'FRMPD4', 'LINC01565', 'KRTAP6-1', 'KRTAP25-1', 'HSFY2', 'EPPIN', 'LINC00608', 'OR56A1', 'OR6Y1', 'OR7A17', 'OR8H2', 'IL31', 'FBXW12', 'ALLC', 'OR4K2', 'OR4X2', 'GRIN2B', 'PRAMEF20', 'OR8G2', 'MYF5', 'LINC01566', 'KIR3DL3', 'MMD2', 'ITIH1', 'MAGEB3', 'ABRA', 'TCERG1L', 'OR8J3', 'CYLC2', 'SLC25A31', 'FAM169B', 'LINC00113', 'LOC729609', 'BMP15', 'FAM74A3', 'CFHR4', 'DEFB126', 'DEFB129', 'DEFB134', 'OR6B3', 'OR2AT4', 'FAM170B', 'INS', 'RHAG', 'CT47A1', 'CSNK1A1P1', 'OTOP1', 'GAGE12F', 'SRY', 'NKAIN3', 'PSKH2', 'MYH1', 'CCK', 'TCP10', 'SNORA70B', 'OR52H1', 'CD200R1L', 'OR5P3', 'REG4', 'POU6F2', 'TRPV5', 'KRTAP10-3', 'GPRC6A', 'ODF3', 'SPINK1', 'SCARNA8', 'FTHL17', 'ZNF705A', 'HOXC12', 'OR6B2', 'AQP2', 'KRTAP11-1', 'OR10H2', 'OR51I2', 'SNORA47', 'ACOT12', 'LCN9', 'DISC2', 'GUCY2EP', 'FGF6', 'TFF2', 'CHIAP2', 'CXADRP2', 'SNORA38B', 'C20ORF166-AS1', 'SNORD94', 'TMEM88B', 'OR4S1', 'OR5M10', 'MGC27382', 'MBD3L5', 'CNTN5', 'PYDC2', 'SNORA59B', 'ENAM', 'FIGLA', 'CCDC37', 'PCGEM1', 'PSG11', 'OR5AN1', 'OR6F1', 'OR14I1', 'SNORD115-26', 'LOC392196', 'SNCB', 'PISRT1', 'BOLL', 'OR7C2', 'SPATA19', 'TTTY8', 'TTTY9B', 'NANOS2', 'AVPR1B', 'XAGE3', 'CNGB1', 'MOGAT3', 'OR2T12', 'NLRP8', 'KRTAP10-7', 'MAGEA1', 'SLC51B', 'CYP2C18', 'CNTNAP4', 'UGT1A4', 'TAS2R60', 'OPN1MW', 'RESP18', 'RPL3L', 'OACYLP', 'IHH', 'LRRTM1', 'SLC17A6', 'MAGEB6', 'SNAR-F', 'MAGEA5', 'CLEC4G', 'PRAMEF1', 'PRDM9', 'SPDYC', 'SPRR2C', 'GRK1', 'KRTAP2-1', 'DNTT', 'KRTAP19-6', 'FOXR1', 'OR6K6', 'APCS', 'SFTPC', 'BSX', 'NEU2', 'PAQR9', 'OR5M3', 'KCNIP4-IT1', 'SLC6A5', 'MUSK', 'PAPOLB', 'CNGA2', 'IL17F', 'SLC2A2', 'GOLGA6L1', 'C10ORF120', 'ZFY', 'F9', 'CALR3', 'ANP32D', 'KRTAP10-12', 'C11ORF94', 'CA6', 'APOA2', 'CCDC166', 'HAO1', 'LINC00304', 'DEFB123', 'PPIAL4E', 'KGFLP1', 'SFTPB', 'LINC00575', 'OR5M8', 'ALX4', 'DKFZP434K028', 'EPB42', 'HCRTR1', 'SPANXN3', 'IZUMO1R', 'KRT3', 'OR4D11', 'KRTAP3-2', 'OR52R1', 'SSX9', 'LELP1', 'CRYGB', 'FTMT', 'OTOL1', 'AWAT1', 'OR7E24', 'LINC00410', 'LINC01553', 'BTN1A1', 'KRT25', 'PLA2G12B', 'KRTAP10-11', 'SCN1A', 'OR1K1', 'C16ORF90', 'ANXA10', 'KRTAP13-1', 'GABRR3', 'PROKR2', 'CELA2B', 'MT4', 'OR12D2', 'C12ORF77', 'COX7B2', 'ALPPL2', 'ZNF679', 'FKBP6', 'FOXD4L3', 'IQCJ', 'OR1E2', 'LGALS14', 'OR4D5', 'TMEM14E', 'PRR32', 'OR2T10', 'HBE1', 'NXNL1', 'PRB4', 'LOC286238', 'LINC01591', 'AADACL3', 'PRAMEF16', 'AGXT2', 'AKR1C8P', 'TMPRSS11BNL', 'SCTR', 'BANF2', 'BTF3P11', 'RPS4Y2', 'CDX4', 'SLC36A3', 'CHAT', 'OR4K5', 'OR10W1', 'MTNR1B', 'YIPF7', 'SPACA3', 'LYZL1', 'TNP1', 'EPGN', 'NEUROD1', 'KRTAP9-2', 'SVOP', 'SLC5A8', 'ANGPTL3', 'SPRR2E', 'OR2G6', 'INSC', 'OR51B5', 'NCAN', 'OR7D4', 'OR2M3', 'PLCZ1', 'SLC10A1', 'LINC01142', 'DAW1', 'OR6A2', 'AADAC', 'NKX2-3', 'TRIM49', 'ACSM2B', 'GBA3', 'ITPK1-AS1', 'OCSTAMP', 'BCYRN1', 'CETN1', 'HIST1H3B', 'SNORA16B', 'GKN2', 'EDDM3B', 'PCSK2', 'HIST1H4B', 'FAM170A', 'HULC', 'LOC647859', 'MCF2', 'RSPH6A', 'C1ORF141', 'C1ORF94', 'OR5B17', 'OR4D10', 'CTRC', 'KRTAP1-3', 'SLC9C1', 'PTH2', 'BET1P1', 'SHH', 'GPHA2', 'OR10AG1', 'C12ORF50', 'ZSCAN10', 'LHX3', 'OR10G8', 'PRAC1', 'PSG4', 'DEFB119', 'HS3ST4', 'PRG1', 'IL3', 'GUCY2F', 'DMRT1', 'LINC00520', 'OR1M1', 'OR1N1', 'OR1S1', 'NLRP13', 'UGT2B28', 'FAM47C', 'MMP23A', 'KRT71', 'TDRG1', 'FAM138B', 'NXPE1', 'FAM150A', 'AMER3', 'PCDH8', 'GCGR', 'NPSR1-AS1', 'ARL13A', 'DRD3', 'HSD52', 'TARM1', 'TCEB3C', 'LINC00202-2', 'SH2D7', 'IGFBP1', 'OR5E1P', 'OR2B3', 'OR5H2', 'SNORA27', 'SLCO6A1', 'CALCB', 'TMEM8C', 'GABRA4', 'SNORD15B', 'LINC00479', 'LOC284798', 'CHRNB3', 'HGC6.3', 'CCKAR', 'XKR7', 'ISL1', 'MRGPRG-AS1', 'CGB8', 'SNORA36B', 'LINC00523', 'MYH7', 'CGB2', 'GUCA1C', 'NEUROG3', 'PRSS57', 'FAM71B', 'VWA5B1', 'PROKR1', 'SLCO1B7', 'VGLL2', 'UBE2DNL', 'NKX6-2', 'PRKY', 'CACNG7', 'GH1', 'CCER1', 'PPP1R2P9', 'TRPM3', 'C7ORF72', 'IL36A', 'BPIFB4', 'UGT2B10', 'USP50', 'MTVR2', 'MUC13', 'LINC00032', 'FGF23', 'OR4K1', 'KRTAP12-2', 'OR52N2', 'DEFB118', 'KRTAP1-5', 'DEFB115', 'AIRE', 'RNF151', 'EXD1', 'FGF16', 'APOA5', 'PASD1', 'SNORA77', 'OR2A14', 'POU4F3', 'SYT14P1', 'HTR1A', 'FMO9P', 'SNORD97', 'ZFAT-AS1', 'B4GALNT2', 'OLFM3', 'HMSD', 'OR2B11', 'FOXE3', 'OR10K1', 'LINC00923', 'OR1L4', 'DSCR10', 'KDM5D', 'ANKRD34C', 'CHRNA9', 'DPRX', 'POU4F2', 'KRTAP3-3', 'MYADML', 'SFTA3', 'OR52K2', 'HCRTR2', 'PTCHD3', 'LINC00710', 'OR1L1', 'MEP1A', 'FAM9B', 'SNORA2B', 'MAGEA9B', 'KRTAP12-1', 'LINC00964', 'OTC', 'GPR148', 'MYH16', 'PACRG-AS1', 'C12ORF42', 'ITLN2', 'OTOR', 'SPATA3', 'OR10AD1', 'HIST1H3F', 'LOC100129055', 'PLD5', 'LOC100132831', 'FAM83A-AS1', 'ARID3C', 'IGLL1', 'C11ORF87', 'MYL1', 'LINC00052', 'OVCH1', 'NPSR1', 'CLEC18C', 'MIR1-1HG', 'TMSB4Y', 'POM121L2', 'HRK', 'CDH10', 'VIL1', 'CLEC4M', 'SNORA64', 'SLC39A12', 'VCX3A', 'CLRN1-AS1', 'OR51F2', 'CMTM5', 'PSG3', 'HTR4', 'HPVC1', 'OR2M2', 'LOC100130264', 'C4ORF50', 'SOX3', 'HIST2H2AB', 'C7ORF57', 'ATOH7', 'AATK-AS1', 'CPA2', 'SPINK14', 'FERD3L', 'TSNAX-DISC1', 'H3F3AP5', 'OR5AR1', 'KRTAP4-8', 'CYP2W1', 'C15ORF43', 'C20ORF144', 'NF1P2', 'KLK12', 'DEFB108B', 'IFNA21', 'OR13C3', 'PPP1R3A', 'PRSS48', 'ADGRG7', 'ADAMTS20', 'CACNG3', 'KRTAP10-1', 'SNORA68', 'MBL2', 'PGA4', 'CXCL6', 'SLC12A1', 'COL20A1', 'KRT18P55', 'PRKAG3', 'S100A7', 'KRT73', 'LINC01101', 'LOC100130417', 'CELP', 'SNORA44', 'CLCA3P', 'LRRC30', 'TMPRSS11B', 'KRTAP7-1', 'SCARNA1', 'XIRP2', 'MCHR2', 'MMP21', 'PTX4', 'FAM19A1', 'MGC16025', 'SLURP1', 'TBX20', 'CCDC54', 'FFAR1', 'KRTAP5-2', 'FER1L6', 'HSFY1P1', 'GSX2', 'PPY2P', 'HTR6', 'NEUROD6', 'NUTM1', 'C2ORF27B', 'HEATR9', 'OR2T2', 'SLC28A2', 'HTR2C', 'KCNJ13', 'LINC01548', 'MYL2', 'FEZF1', 'MYH4', 'TMPRSS7', 'TMEM212', 'LINC00691', 'PRO0611', 'BARHL1', 'LOC285629', 'PATE3', 'SNORA72', 'OR5M1', 'TSHB', 'HILS1', 'C1ORF140', 'RFPL1', 'SNORA61', 'CDH19', 'SNORA5C', 'LOC644669', 'NYAP2', 'CLRN1', 'SALL3', 'GRM7', 'GCKR', 'TPTE2', 'ADGRE3', 'LRRC52', 'LRRIQ4', 'WFDC6', 'KRT12', 'CAPZA3', 'FAM71E2', 'C14ORF178', 'ADH6', 'PRTN3', 'LRRC74A', 'OR12D3', 'FNDC9', 'C5ORF47', 'A1CF', 'OR10R2', 'ZIC5', 'C12ORF56', 'PAGE2', 'C9ORF171', 'FSHR', 'OPRM1', 'OR4F17', 'KAAG1', 'CTXN3', 'CTRB2', 'OR5K1', 'FRG2DP', 'CAPNS2', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 2.5975422751512873e-15 NRMSE: 7.01002106386312e-16 MAPE: 1.9524444200726e-12 Pearson Correlation: 0.12103376834208115 Spearman Correlation: 0.15493141514426592 Coefficient of Determination: -1.3352358507471918 RMSE: 0.7113819800675654 NRMSE: 0.28544795681961244 MAPE: 594.0250034884663 Predictor: ElasticNet Pearson Correlation: 0.8421612414576437 Spearman Correlation: 0.8042403144492406 Coefficient of Determination: 0.6556987408184385 RMSE: 0.26940934988485415 NRMSE: 0.07270585104854557 MAPE: 155.72724970829947 Pearson Correlation: 0.39620195837350125 Spearman Correlation: 0.440338064991627 Coefficient of Determination: 0.1422524298419794 RMSE: 0.4311389239614168 NRMSE: 0.17299809159982374 MAPE: 237.85420646864833 Predictor: RandomForests Pearson Correlation: 0.5745676466578189 Spearman Correlation: 0.5755927152010699 Coefficient of Determination: 0.3040713403259495 RMSE: 0.3830237636075926 NRMSE: 0.10336712039433395 MAPE: 243.86827145409669 Pearson Correlation: 0.403429465949659 Spearman Correlation: 0.4344514575105335 Coefficient of Determination: 0.15225739232033786 RMSE: 0.4286170974352281 NRMSE: 0.17198618765858856 MAPE: 274.00621045985025 Fold: 2 Protein: RB1 x_train_column_count: 1030 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'OR8B3', 'LGALS14', 'OR52A4P', 'OR52B4', 'CT45A1', 'ARL5C', 'GYS2', 'SERPINI2', 'OR9A2', 'TMEM252', 'TMPRSS11F', 'TMPRSS11B', 'C10ORF53', 'TTTY2', 'MOGAT3', 'SNORA37', 'OR4F15', 'OR6S1', 'OR14C36', 'NXF2B', 'LINC00895', 'F13B', 'CGB5', 'LINC00469', 'HTR5A', 'HBG1', 'TCP10L2', 'IFNA16', 'OR10V1', 'FGA', 'PRSS1', 'ZNF479', 'MAGEB3', 'ZCCHC13', 'PPY', 'SNORA51', 'OR5H14', 'LINC00696', 'RAX2', 'WFDC5', 'OR4A16', 'GPR78', 'CLEC6A', 'ASB17', 'OR5T2', 'VWC2L', 'PSG7', 'ALPPL2', 'SST', 'PLG', 'ANKUB1', 'LINC00575', 'NOX3', 'SCARNA11', 'OR1S2', 'SNORA34', 'PLET1', 'LEUTX', 'LINC00523', 'RPL13AP17', 'OR1N1', 'LOC145845', 'ADAM18', 'TPD52L3', 'LINC01205', 'C18ORF42', 'POTED', 'ALOX12B', 'OR2G2', 'XAGE5', 'OR6M1', 'AMTN', 'OR2M2', 'HIST1H4F', 'C2ORF83', 'ARSF', 'SSX5', 'SFTA3', 'ARHGAP36', 'OR9G4', 'EPPIN', 'SLC1A6', 'ACTR3BP2', 'RESP18', 'OR11H4', 'OR4S1', 'ARR3', 'MBD3L5', 'OR2A2', 'LINC00488', 'CABS1', 'FMR1NB', 'TAAR9', 'PLSCR5', 'HNRNPCL1', 'SNORD89', 'TSGA13', 'ACTRT2', 'ZPBP', 'PROKR1', 'GH1', 'LINC01101', 'KRT13', 'BPIFA3', 'OPN1MW', 'OR4D9', 'SNORA70B', 'DEFB126', 'LINC00934', 'PROP1', 'SNORA1', 'FAM27B', 'OR8G5', 'CLCA4', 'ZIM3', 'PWAR4', 'CASC8', 'GABRG3', 'TRHR', 'CLRN2', 'ADGRG7', 'SPATA31C1', 'PRAMEF20', 'RGS8', 'RTP2', 'STATH', 'TCERG1L', 'ZAR1', 'COL6A4P1', 'MYBPHL', 'TMEM72', 'OR8G2', 'KRTAP25-1', 'OR2M4', 'CYP2W1', 'KRTAP19-8', 'SVOP', 'WFDC8', 'LINC00114', 'OR8H2', 'SLC38A8', 'OR2M7', 'SERPINB3', 'SLC32A1', 'LHX9', 'HYALP1', 'LINC00636', 'GYPB', 'NKAIN3', 'OR2T35', 'KRTAP6-1', 'HBD', 'KCNQ1DN', 'OR4C16', 'KRTAP19-2', 'DUXA', 'OR6Y1', 'IQCJ', 'LGI3', 'SPACA7', 'DAOA', 'OR7A17', 'FAM169B', 'OR2L8', 'HSFY2', 'SPANXA2', 'PPY2P', 'B3GNT6', 'DEFB104A', 'UGT2A3', 'OR6B3', 'TCP10', 'OR4K17', 'RHAG', 'SNORA38B', 'CTRB1', 'KRT3', 'INS', 'LINC00200', 'SPDYC', 'PRKAG3', 'OLIG1', 'KRTAP10-12', 'MYH1', 'LINC01566', 'FAM71C', 'LINC01565', 'PABPC1L2A', 'TRPV5', 'FDCSP', 'OR8J3', 'FTMT', 'INSM2', 'NEU2', 'TBC1D3P2', 'PPIAL4E', 'DYDC1', 'SFTPC', 'PRR27', 'MYF5', 'ACER1', 'DEFB129', 'HPD', 'IVL', 'C9ORF135', 'SNORD115-26', 'FBXW12', 'C3ORF30', 'IL13', 'MMD2', 'SLC51B', 'ITIH1', 'TEX13B', 'OR2AT4', 'HMX3', 'DNTT', 'CT47A1', 'OR6B2', 'KRTAP4-3', 'GSTA5', 'FAM27L', 'GPR148', 'OR1K1', 'LINC00602', 'AVPR1B', 'PRG1', 'C11ORF94', 'APOC3', 'LCN9', 'CYP2C18', 'SCARNA8', 'TAS2R60', 'KRTAP10-7', 'ZFAT-AS1', 'UCMA', 'SCN1A', 'LINC00113', 'FTHL17', 'HHLA1', 'LCE1D', 'PYDC2', 'OR11L1', 'GUCY2EP', 'CYLC2', 'KRTAP10-1', 'CSNK1A1P1', 'CCDC37', 'OR5M10', 'SPINK1', 'PSKH2', 'SULT1C3', 'CYP11B2', 'SNORD94', 'CYP7A1', 'CCK', 'SLC25A31', 'C20ORF173', 'OR5M8', 'LRRTM1', 'LOC729609', 'EPB42', 'TTTY8', 'TTTY9B', 'SLC17A6', 'EPGN', 'LYZL1', 'CGB8', 'SNORA77', 'CHIAP2', 'SPATA19', 'FAM138D', 'OLFM3', 'PCGEM1', 'UGT1A4', 'GBX2', 'SBSN', 'ACOT12', 'HBG2', 'CPLX3', 'REG4', 'PSG11', 'CNTNAP4', 'KRTAP21-1', 'SNORA47', 'KRTAP3-2', 'FFAR1', 'ABRA', 'TMEM202', 'HAO1', 'BOLL', 'ANGPTL3', 'ASAP1-IT1', 'SNCB', 'MMP20', 'LCN1', 'OR52K1', 'PRAMEF1', 'SPACA3', 'MUSK', 'PRDM9', 'SLITRK3', 'FOXN3-AS2', 'CCDC166', 'OR6K6', 'AADAC', 'KRTAP19-6', 'OR51G2', 'INSC', 'CCL24', 'UGT2B28', 'NKX2-1', 'OR2W1', 'DPRX', 'DPPA5', 'SNAR-F', 'MGC27382', 'CFHR4', 'NCAN', 'BRINP3', 'AWAT1', 'FOXD4L3', 'LOC285847', 'KRTAP2-1', 'CRLF2', 'DEFB123', 'BMP15', 'C1ORF94', 'IL17F', 'ENAM', 'TSKS', 'IQCF6', 'DPPA2', 'OR4C12', 'SPRR2E', 'DUSP21', 'LINC00923', 'APCS', 'KCNIP4-IT1', 'GRK1', 'OR51I2', 'PRSS54', 'MAGEA5', 'CRYGB', 'GAGE12F', 'ARL13A', 'OR56A1', 'MAP3K15', 'ASB11', 'DKFZP434K028', 'OR5H1', 'KRT25', 'NYX', 'CA6', 'NTS', 'C10ORF120', 'GCSAML-AS1', 'SLC10A1', 'SLC6A5', 'RPL3L', 'KRTAP10-6', 'IZUMO1R', 'MMP23A', 'MTNR1B', 'DAW1', 'BANF2', 'PROKR2', 'FAM74A3', 'NXNL1', 'TMPRSS12', 'OR6K2', 'PAPOLB', 'KRTAP10-3', 'OR12D2', 'AQP2', 'CD200R1L', 'FAM138B', 'OR6C2', 'LINC01312', 'LINC00410', 'IGLL3P', 'ADAM29', 'TFF2', 'NUTM1', 'SLURP1', 'KRTAP19-3', 'KRTAP5-4', 'AKR1C8P', 'TMEM88B', 'GOLGA6L1', 'OR4D5', 'KCNMB2', 'OTOL1', 'GRIN2B', 'YWHAEP7', 'ANP32D', 'OR1L1', 'TTTY15', 'SFTPB', 'NMUR2', 'IL3', 'OR51F2', 'YIPF7', 'USP9Y', 'CSN3', 'FAM71B', 'NEUROD1', 'OR2T10', 'OR2M3', 'OR10W1', 'ZNF705A', 'GPHA2', 'HBE1', 'SLC22A10', 'SNAR-G1', 'SNORA59B', 'PRB4', 'LRRC30', 'RBPJL', 'MAGEA9B', 'OR1B1', 'TARM1', 'AMER3', 'OR51B5', 'EDDM3B', 'TRIM48', 'GABRR3', 'IL36RN', 'URAD', 'RPS4Y2', 'KRTAP9-2', 'SDR16C6P', 'SLC9C1', 'SCTR', 'OCSTAMP', 'OR52R1', 'C16ORF90', 'PLA2G12B', 'NKX2-3', 'MUC2', 'SPANXN3', 'OR6A2', 'COX7B2', 'SYT14P1', 'OR7D4', 'SNORA76C', 'USH1C', 'TNP1', 'SPZ1', 'SNORD15B', 'AKR1D1', 'OR8I2', 'PSG4', 'BCYRN1', 'SHH', 'CCL15-CCL14', 'B4GALNT2', 'HULC', 'TBC1D21', 'OR13C9', 'FIGLA', 'ZNF679', 'OR5M3', 'PTH2', 'OR2L1P', 'TCEB3C', 'DEFB124', 'TRHDE', 'ANKRD34C', 'DEFB113', 'DMP1', 'GKN2', 'SNAR-I', 'CD300LD', 'DDI1', 'SNAR-E', 'GPR22', 'BPIFB4', 'CTRB2', 'CPA2', 'ADGRD2', 'KRTAP1-5', 'XKR7', 'OR10G8', 'BPIFB3', 'PPP1R2P9', 'SNORA36A', 'FKBP6', 'VIL1', 'SLC36A3', 'PCDH8', 'FAM41AY1', 'ACSM2B', 'AADACL3', 'SNORD97', 'NEUROD6', 'LINC00520', 'MAGEA1', 'CHRNB3', 'OR2AG1', 'OR4D2', 'C12ORF50', 'PRAC1', 'SH2D7', 'OACYLP', 'DISC2', 'NXPE1', 'USP50', 'BHLHE23', 'MYH7', 'CALCB', 'LOC284798', 'DEFB110', 'RAPGEF4-AS1', 'AIRE', 'KGFLP1', 'RFX6', 'CPNE4', 'CNGB1', 'CETN1', 'C2ORF27B', 'SSX9', 'SLC5A8', 'C11ORF40', 'LOC400736', 'SLCO1B7', 'TNFSF18', 'KRTAP1-1', 'KRT71', 'PRMT8', 'POU4F1', 'DMRT1', 'FAM183CP', 'KCNK4', 'ASB15', 'SCEL', 'GLYATL3', 'NEUROG3', 'CA5A', 'SNORA27', 'OR2L2', 'XIRP2', 'UGT2B10', 'FAM47C', 'NF1P2', 'DEFB118', 'TRIM75P', 'LINC00029', 'KCNJ16', 'CACNG7', 'HTR1A', 'DSCR10', 'MIR1-1HG', 'OR2A14', 'CD1B', 'OR8D4', 'GAGE2B', 'SPATA3', 'CIB4', 'HYMAI', 'ARL14', 'PRL', 'LOC100132831', 'FMO9P', 'HGC6.3', 'BTF3P11', 'OR52N1', 'SNORA16B', 'CDH10', 'HRK', 'KRTAP11-1', 'LINC00479', 'OR10H2', 'SNORA58', 'C12ORF42', 'LINC00202-2', 'C6ORF10', 'ODF3', 'GFI1B', 'OR1L4', 'OVCH1', 'HSD52', 'POU4F2', 'HIST1H3A', 'FAM19A1', 'HOXC12', 'OR52N2', 'NPB', 'ADRB3', 'HIST2H2AB', 'HIST1H3F', 'RAET1L', 'SNORA2B', 'HCRTR2', 'SPOCK3', 'SCARNA1', 'GPR52', 'SLC39A12', 'ANKRD20A20P', 'XAGE3', 'HTR2C', 'IFNL1', 'GSC2', 'DEFB109P1', 'CLRN1-AS1', 'SPINT3', 'HPVC1', 'HHATL', 'CYP2A7', 'SLC2A2', 'OR2A12', 'HIST1H2BM', 'RNF222', 'IGFBP1', 'NEUROG1', 'CA4', 'TPSD1', 'SERPINB11', 'NKX6-2', 'OR5H2', 'AATK-AS1', 'KRT12', 'KLRC4', 'LINC00314', 'FOXG1', 'GABBR2', 'SNORA72', 'MYH16', 'LOC647859', 'OR51T1', 'CRYGC', 'OR5M1', 'FOXE3', 'GBA3', 'LINC00710', 'CRISP2', 'EXD1', 'F2', 'TRPM3', 'CLCA3P', 'SLC13A1', 'LOC285627', 'CGB2', 'MROH5', 'LINC00452', 'LINC00964', 'PLD5', 'LINC00691', 'KRTAP12-1', 'OR51L1', 'LOC400940', 'OR4N4', 'MYL1', 'TMEM207', 'FAM170A', 'SCGB3A2', 'PTCHD3', 'NYAP2', 'OR51A2', 'C5ORF47', 'FAM92A1P2', 'IGLL1', 'FRMPD2', 'HBM', 'POU4F3', 'POU6F2', 'PRSS48', 'TSHB', 'LINC01105', 'OR10AD1', 'FOXI3', 'SNORA68', 'STON1-GTF2A1L', 'S100A12', 'B3GALT1', 'TKTL2', 'C12ORF56', 'C1ORF146', 'MEP1A', 'OR3A2', 'MT1B', 'CACNG3', 'LOC100130417', 'ALAS2', 'DPP10', 'MAGEA11', 'SLC22A12', 'INS-IGF2', 'PRAMEF14', 'ART1', 'OR13C2', 'SSX8', 'CLEC18C', 'ZIC5', 'OR5A1', 'GH2', 'GPRC6A', 'MYH4', 'OR5E1P', 'OR52K2', 'OR13H1', 'MAGEB4', 'PAQR9', 'HIST1H3B', 'LOC391343', 'C11ORF87', 'CCL7', 'CWH43', 'PDX1', 'VSTM5', 'NHLH2', 'SPANXN2', 'HMHB1', 'PCSK2', 'FGF16', 'FAM9B', 'SNORA64', 'PAEP', 'FAM71E2', 'FEZF1', 'PATE3', 'FRG2DP', 'DACH2', 'DAPL1', 'LOC100130264', 'LOC100129055', 'MYADML', 'FEZF2', 'MMP21', 'ABCA13', 'TBATA', 'SNORA16A', 'HIST1H4B', 'CYP1A2', 'BRDT', 'LINC00608', 'OTC', 'IFNE', 'CASR', 'MAGEA12', 'GABRA3', 'SLITRK1', 'GABRB1', 'OR52A1', 'KLK12', 'IFNL2', 'TAS2R42', 'SPRR1B', 'C4ORF51', 'GJA10', 'OR12D3', 'GJB7', 'GPR61', 'MYL2', 'TBX20', 'OR2T2', 'KAAG1', 'SPRR2G', 'VAX1', 'ISL1', 'C17ORF78', 'GCKR', 'RNF151', 'LINC00652', 'KRT18P55', 'PLCZ1', 'OR7A5', 'KRTAP10-4', 'OR9K2', 'ADCYAP1R1', 'S100A7', 'ZG16', 'KRTAP4-5', 'FOXR1', 'KRT73', 'CST13P', 'OPRM1', 'SPINK14', 'FSHR', 'OR5K1', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 1.1697035684298787e-15 NRMSE: 4.2777339395475376e-16 MAPE: 3.378313670338364e-12 Pearson Correlation: 0.059307655113180355 Spearman Correlation: 0.04686859818554288 Coefficient of Determination: -2.169434478084648 RMSE: 0.4360003454318403 NRMSE: 0.2497968084654927 MAPE: 2018.653509749833 Predictor: ElasticNet Pearson Correlation: 0.6984891291118518 Spearman Correlation: 0.5786116870528872 Coefficient of Determination: 0.41136140262513354 RMSE: 0.18033011049550735 NRMSE: 0.06594869459314927 MAPE: 293.2825964854941 Pearson Correlation: 0.10842899926498387 Spearman Correlation: 0.11315481416447176 Coefficient of Determination: -0.0355727869466953 RMSE: 0.24922193237241258 NRMSE: 0.14278622473239252 MAPE: 197.11780625223574 Predictor: RandomForests Pearson Correlation: 0.627557085074531 Spearman Correlation: 0.4498136186210809 Coefficient of Determination: 0.20712263920704477 RMSE: 0.20928923461158083 NRMSE: 0.07653936315520071 MAPE: 229.11119025602932 Pearson Correlation: 0.07237664735865287 Spearman Correlation: 0.14078742431549077 Coefficient of Determination: -0.01968609338025007 RMSE: 0.24730289053862306 NRMSE: 0.14168675192138458 MAPE: 229.03367835638005 Protein: CDH1 x_train_column_count: 1030 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'OR8B3', 'LGALS14', 'OR52A4P', 'OR52B4', 'CT45A1', 'ARL5C', 'GYS2', 'SERPINI2', 'OR9A2', 'TMEM252', 'TMPRSS11F', 'TMPRSS11B', 'C10ORF53', 'TTTY2', 'MOGAT3', 'SNORA37', 'OR4F15', 'OR6S1', 'OR14C36', 'NXF2B', 'LINC00895', 'F13B', 'CGB5', 'LINC00469', 'HTR5A', 'HBG1', 'TCP10L2', 'IFNA16', 'OR10V1', 'FGA', 'PRSS1', 'ZNF479', 'MAGEB3', 'ZCCHC13', 'PPY', 'SNORA51', 'OR5H14', 'LINC00696', 'RAX2', 'WFDC5', 'OR4A16', 'GPR78', 'CLEC6A', 'ASB17', 'OR5T2', 'VWC2L', 'PSG7', 'ALPPL2', 'SST', 'PLG', 'ANKUB1', 'LINC00575', 'NOX3', 'SCARNA11', 'OR1S2', 'SNORA34', 'PLET1', 'LEUTX', 'LINC00523', 'RPL13AP17', 'OR1N1', 'LOC145845', 'ADAM18', 'TPD52L3', 'LINC01205', 'C18ORF42', 'POTED', 'ALOX12B', 'OR2G2', 'XAGE5', 'OR6M1', 'AMTN', 'OR2M2', 'HIST1H4F', 'C2ORF83', 'ARSF', 'SSX5', 'SFTA3', 'ARHGAP36', 'OR9G4', 'EPPIN', 'SLC1A6', 'ACTR3BP2', 'RESP18', 'OR11H4', 'OR4S1', 'ARR3', 'MBD3L5', 'OR2A2', 'LINC00488', 'CABS1', 'FMR1NB', 'TAAR9', 'PLSCR5', 'HNRNPCL1', 'SNORD89', 'TSGA13', 'ACTRT2', 'ZPBP', 'PROKR1', 'GH1', 'LINC01101', 'KRT13', 'BPIFA3', 'OPN1MW', 'OR4D9', 'SNORA70B', 'DEFB126', 'LINC00934', 'PROP1', 'SNORA1', 'FAM27B', 'OR8G5', 'CLCA4', 'ZIM3', 'PWAR4', 'CASC8', 'GABRG3', 'TRHR', 'CLRN2', 'ADGRG7', 'SPATA31C1', 'PRAMEF20', 'RGS8', 'RTP2', 'STATH', 'TCERG1L', 'ZAR1', 'COL6A4P1', 'MYBPHL', 'TMEM72', 'OR8G2', 'KRTAP25-1', 'OR2M4', 'CYP2W1', 'KRTAP19-8', 'SVOP', 'WFDC8', 'LINC00114', 'OR8H2', 'SLC38A8', 'OR2M7', 'SERPINB3', 'SLC32A1', 'LHX9', 'HYALP1', 'LINC00636', 'GYPB', 'NKAIN3', 'OR2T35', 'KRTAP6-1', 'HBD', 'KCNQ1DN', 'OR4C16', 'KRTAP19-2', 'DUXA', 'OR6Y1', 'IQCJ', 'LGI3', 'SPACA7', 'DAOA', 'OR7A17', 'FAM169B', 'OR2L8', 'HSFY2', 'SPANXA2', 'PPY2P', 'B3GNT6', 'DEFB104A', 'UGT2A3', 'OR6B3', 'TCP10', 'OR4K17', 'RHAG', 'SNORA38B', 'CTRB1', 'KRT3', 'INS', 'LINC00200', 'SPDYC', 'PRKAG3', 'OLIG1', 'KRTAP10-12', 'MYH1', 'LINC01566', 'FAM71C', 'LINC01565', 'PABPC1L2A', 'TRPV5', 'FDCSP', 'OR8J3', 'FTMT', 'INSM2', 'NEU2', 'TBC1D3P2', 'PPIAL4E', 'DYDC1', 'SFTPC', 'PRR27', 'MYF5', 'ACER1', 'DEFB129', 'HPD', 'IVL', 'C9ORF135', 'SNORD115-26', 'FBXW12', 'C3ORF30', 'IL13', 'MMD2', 'SLC51B', 'ITIH1', 'TEX13B', 'OR2AT4', 'HMX3', 'DNTT', 'CT47A1', 'OR6B2', 'KRTAP4-3', 'GSTA5', 'FAM27L', 'GPR148', 'OR1K1', 'LINC00602', 'AVPR1B', 'PRG1', 'C11ORF94', 'APOC3', 'LCN9', 'CYP2C18', 'SCARNA8', 'TAS2R60', 'KRTAP10-7', 'ZFAT-AS1', 'UCMA', 'SCN1A', 'LINC00113', 'FTHL17', 'HHLA1', 'LCE1D', 'PYDC2', 'OR11L1', 'GUCY2EP', 'CYLC2', 'KRTAP10-1', 'CSNK1A1P1', 'CCDC37', 'OR5M10', 'SPINK1', 'PSKH2', 'SULT1C3', 'CYP11B2', 'SNORD94', 'CYP7A1', 'CCK', 'SLC25A31', 'C20ORF173', 'OR5M8', 'LRRTM1', 'LOC729609', 'EPB42', 'TTTY8', 'TTTY9B', 'SLC17A6', 'EPGN', 'LYZL1', 'CGB8', 'SNORA77', 'CHIAP2', 'SPATA19', 'FAM138D', 'OLFM3', 'PCGEM1', 'UGT1A4', 'GBX2', 'SBSN', 'ACOT12', 'HBG2', 'CPLX3', 'REG4', 'PSG11', 'CNTNAP4', 'KRTAP21-1', 'SNORA47', 'KRTAP3-2', 'FFAR1', 'ABRA', 'TMEM202', 'HAO1', 'BOLL', 'ANGPTL3', 'ASAP1-IT1', 'SNCB', 'MMP20', 'LCN1', 'OR52K1', 'PRAMEF1', 'SPACA3', 'MUSK', 'PRDM9', 'SLITRK3', 'FOXN3-AS2', 'CCDC166', 'OR6K6', 'AADAC', 'KRTAP19-6', 'OR51G2', 'INSC', 'CCL24', 'UGT2B28', 'NKX2-1', 'OR2W1', 'DPRX', 'DPPA5', 'SNAR-F', 'MGC27382', 'CFHR4', 'NCAN', 'BRINP3', 'AWAT1', 'FOXD4L3', 'LOC285847', 'KRTAP2-1', 'CRLF2', 'DEFB123', 'BMP15', 'C1ORF94', 'IL17F', 'ENAM', 'TSKS', 'IQCF6', 'DPPA2', 'OR4C12', 'SPRR2E', 'DUSP21', 'LINC00923', 'APCS', 'KCNIP4-IT1', 'GRK1', 'OR51I2', 'PRSS54', 'MAGEA5', 'CRYGB', 'GAGE12F', 'ARL13A', 'OR56A1', 'MAP3K15', 'ASB11', 'DKFZP434K028', 'OR5H1', 'KRT25', 'NYX', 'CA6', 'NTS', 'C10ORF120', 'GCSAML-AS1', 'SLC10A1', 'SLC6A5', 'RPL3L', 'KRTAP10-6', 'IZUMO1R', 'MMP23A', 'MTNR1B', 'DAW1', 'BANF2', 'PROKR2', 'FAM74A3', 'NXNL1', 'TMPRSS12', 'OR6K2', 'PAPOLB', 'KRTAP10-3', 'OR12D2', 'AQP2', 'CD200R1L', 'FAM138B', 'OR6C2', 'LINC01312', 'LINC00410', 'IGLL3P', 'ADAM29', 'TFF2', 'NUTM1', 'SLURP1', 'KRTAP19-3', 'KRTAP5-4', 'AKR1C8P', 'TMEM88B', 'GOLGA6L1', 'OR4D5', 'KCNMB2', 'OTOL1', 'GRIN2B', 'YWHAEP7', 'ANP32D', 'OR1L1', 'TTTY15', 'SFTPB', 'NMUR2', 'IL3', 'OR51F2', 'YIPF7', 'USP9Y', 'CSN3', 'FAM71B', 'NEUROD1', 'OR2T10', 'OR2M3', 'OR10W1', 'ZNF705A', 'GPHA2', 'HBE1', 'SLC22A10', 'SNAR-G1', 'SNORA59B', 'PRB4', 'LRRC30', 'RBPJL', 'MAGEA9B', 'OR1B1', 'TARM1', 'AMER3', 'OR51B5', 'EDDM3B', 'TRIM48', 'GABRR3', 'IL36RN', 'URAD', 'RPS4Y2', 'KRTAP9-2', 'SDR16C6P', 'SLC9C1', 'SCTR', 'OCSTAMP', 'OR52R1', 'C16ORF90', 'PLA2G12B', 'NKX2-3', 'MUC2', 'SPANXN3', 'OR6A2', 'COX7B2', 'SYT14P1', 'OR7D4', 'SNORA76C', 'USH1C', 'TNP1', 'SPZ1', 'SNORD15B', 'AKR1D1', 'OR8I2', 'PSG4', 'BCYRN1', 'SHH', 'CCL15-CCL14', 'B4GALNT2', 'HULC', 'TBC1D21', 'OR13C9', 'FIGLA', 'ZNF679', 'OR5M3', 'PTH2', 'OR2L1P', 'TCEB3C', 'DEFB124', 'TRHDE', 'ANKRD34C', 'DEFB113', 'DMP1', 'GKN2', 'SNAR-I', 'CD300LD', 'DDI1', 'SNAR-E', 'GPR22', 'BPIFB4', 'CTRB2', 'CPA2', 'ADGRD2', 'KRTAP1-5', 'XKR7', 'OR10G8', 'BPIFB3', 'PPP1R2P9', 'SNORA36A', 'FKBP6', 'VIL1', 'SLC36A3', 'PCDH8', 'FAM41AY1', 'ACSM2B', 'AADACL3', 'SNORD97', 'NEUROD6', 'LINC00520', 'MAGEA1', 'CHRNB3', 'OR2AG1', 'OR4D2', 'C12ORF50', 'PRAC1', 'SH2D7', 'OACYLP', 'DISC2', 'NXPE1', 'USP50', 'BHLHE23', 'MYH7', 'CALCB', 'LOC284798', 'DEFB110', 'RAPGEF4-AS1', 'AIRE', 'KGFLP1', 'RFX6', 'CPNE4', 'CNGB1', 'CETN1', 'C2ORF27B', 'SSX9', 'SLC5A8', 'C11ORF40', 'LOC400736', 'SLCO1B7', 'TNFSF18', 'KRTAP1-1', 'KRT71', 'PRMT8', 'POU4F1', 'DMRT1', 'FAM183CP', 'KCNK4', 'ASB15', 'SCEL', 'GLYATL3', 'NEUROG3', 'CA5A', 'SNORA27', 'OR2L2', 'XIRP2', 'UGT2B10', 'FAM47C', 'NF1P2', 'DEFB118', 'TRIM75P', 'LINC00029', 'KCNJ16', 'CACNG7', 'HTR1A', 'DSCR10', 'MIR1-1HG', 'OR2A14', 'CD1B', 'OR8D4', 'GAGE2B', 'SPATA3', 'CIB4', 'HYMAI', 'ARL14', 'PRL', 'LOC100132831', 'FMO9P', 'HGC6.3', 'BTF3P11', 'OR52N1', 'SNORA16B', 'CDH10', 'HRK', 'KRTAP11-1', 'LINC00479', 'OR10H2', 'SNORA58', 'C12ORF42', 'LINC00202-2', 'C6ORF10', 'ODF3', 'GFI1B', 'OR1L4', 'OVCH1', 'HSD52', 'POU4F2', 'HIST1H3A', 'FAM19A1', 'HOXC12', 'OR52N2', 'NPB', 'ADRB3', 'HIST2H2AB', 'HIST1H3F', 'RAET1L', 'SNORA2B', 'HCRTR2', 'SPOCK3', 'SCARNA1', 'GPR52', 'SLC39A12', 'ANKRD20A20P', 'XAGE3', 'HTR2C', 'IFNL1', 'GSC2', 'DEFB109P1', 'CLRN1-AS1', 'SPINT3', 'HPVC1', 'HHATL', 'CYP2A7', 'SLC2A2', 'OR2A12', 'HIST1H2BM', 'RNF222', 'IGFBP1', 'NEUROG1', 'CA4', 'TPSD1', 'SERPINB11', 'NKX6-2', 'OR5H2', 'AATK-AS1', 'KRT12', 'KLRC4', 'LINC00314', 'FOXG1', 'GABBR2', 'SNORA72', 'MYH16', 'LOC647859', 'OR51T1', 'CRYGC', 'OR5M1', 'FOXE3', 'GBA3', 'LINC00710', 'CRISP2', 'EXD1', 'F2', 'TRPM3', 'CLCA3P', 'SLC13A1', 'LOC285627', 'CGB2', 'MROH5', 'LINC00452', 'LINC00964', 'PLD5', 'LINC00691', 'KRTAP12-1', 'OR51L1', 'LOC400940', 'OR4N4', 'MYL1', 'TMEM207', 'FAM170A', 'SCGB3A2', 'PTCHD3', 'NYAP2', 'OR51A2', 'C5ORF47', 'FAM92A1P2', 'IGLL1', 'FRMPD2', 'HBM', 'POU4F3', 'POU6F2', 'PRSS48', 'TSHB', 'LINC01105', 'OR10AD1', 'FOXI3', 'SNORA68', 'STON1-GTF2A1L', 'S100A12', 'B3GALT1', 'TKTL2', 'C12ORF56', 'C1ORF146', 'MEP1A', 'OR3A2', 'MT1B', 'CACNG3', 'LOC100130417', 'ALAS2', 'DPP10', 'MAGEA11', 'SLC22A12', 'INS-IGF2', 'PRAMEF14', 'ART1', 'OR13C2', 'SSX8', 'CLEC18C', 'ZIC5', 'OR5A1', 'GH2', 'GPRC6A', 'MYH4', 'OR5E1P', 'OR52K2', 'OR13H1', 'MAGEB4', 'PAQR9', 'HIST1H3B', 'LOC391343', 'C11ORF87', 'CCL7', 'CWH43', 'PDX1', 'VSTM5', 'NHLH2', 'SPANXN2', 'HMHB1', 'PCSK2', 'FGF16', 'FAM9B', 'SNORA64', 'PAEP', 'FAM71E2', 'FEZF1', 'PATE3', 'FRG2DP', 'DACH2', 'DAPL1', 'LOC100130264', 'LOC100129055', 'MYADML', 'FEZF2', 'MMP21', 'ABCA13', 'TBATA', 'SNORA16A', 'HIST1H4B', 'CYP1A2', 'BRDT', 'LINC00608', 'OTC', 'IFNE', 'CASR', 'MAGEA12', 'GABRA3', 'SLITRK1', 'GABRB1', 'OR52A1', 'KLK12', 'IFNL2', 'TAS2R42', 'SPRR1B', 'C4ORF51', 'GJA10', 'OR12D3', 'GJB7', 'GPR61', 'MYL2', 'TBX20', 'OR2T2', 'KAAG1', 'SPRR2G', 'VAX1', 'ISL1', 'C17ORF78', 'GCKR', 'RNF151', 'LINC00652', 'KRT18P55', 'PLCZ1', 'OR7A5', 'KRTAP10-4', 'OR9K2', 'ADCYAP1R1', 'S100A7', 'ZG16', 'KRTAP4-5', 'FOXR1', 'KRT73', 'CST13P', 'OPRM1', 'SPINK14', 'FSHR', 'OR5K1', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 6.0034129157064444e-15 NRMSE: 9.630886204710747e-16 MAPE: 5.002940450589494e-12 Pearson Correlation: 0.3044227077099506 Spearman Correlation: 0.32199785386791535 Coefficient of Determination: -1.8527547233055608 RMSE: 1.9434085374214038 NRMSE: 0.34512671593347605 MAPE: 805.4257265909534 Predictor: ElasticNet Pearson Correlation: 0.9169260484778308 Spearman Correlation: 0.8802045927038603 Coefficient of Determination: 0.811247052699263 RMSE: 0.4868514358198203 NRMSE: 0.07810242012028881 MAPE: 214.42036868983521 Pearson Correlation: 0.5867628844392277 Spearman Correlation: 0.6241342308067507 Coefficient of Determination: 0.30577157328412397 RMSE: 0.9587007919587864 NRMSE: 0.17025409198344635 MAPE: 375.93523237950683 Predictor: RandomForests Pearson Correlation: 0.7648439242080054 Spearman Correlation: 0.6723270713933032 Coefficient of Determination: 0.5806326176026948 RMSE: 0.7256829321779945 NRMSE: 0.11641660899622916 MAPE: 130.61141385413032 Pearson Correlation: 0.6440615871438021 Spearman Correlation: 0.6765251386403547 Coefficient of Determination: 0.3803013403013663 RMSE: 0.9057788343014113 NRMSE: 0.16085576883349514 MAPE: 207.87143304261315 Protein: CDH2 x_train_column_count: 1030 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'OR8B3', 'LGALS14', 'OR52A4P', 'OR52B4', 'CT45A1', 'ARL5C', 'GYS2', 'SERPINI2', 'OR9A2', 'TMEM252', 'TMPRSS11F', 'TMPRSS11B', 'C10ORF53', 'TTTY2', 'MOGAT3', 'SNORA37', 'OR4F15', 'OR6S1', 'OR14C36', 'NXF2B', 'LINC00895', 'F13B', 'CGB5', 'LINC00469', 'HTR5A', 'HBG1', 'TCP10L2', 'IFNA16', 'OR10V1', 'FGA', 'PRSS1', 'ZNF479', 'MAGEB3', 'ZCCHC13', 'PPY', 'SNORA51', 'OR5H14', 'LINC00696', 'RAX2', 'WFDC5', 'OR4A16', 'GPR78', 'CLEC6A', 'ASB17', 'OR5T2', 'VWC2L', 'PSG7', 'ALPPL2', 'SST', 'PLG', 'ANKUB1', 'LINC00575', 'NOX3', 'SCARNA11', 'OR1S2', 'SNORA34', 'PLET1', 'LEUTX', 'LINC00523', 'RPL13AP17', 'OR1N1', 'LOC145845', 'ADAM18', 'TPD52L3', 'LINC01205', 'C18ORF42', 'POTED', 'ALOX12B', 'OR2G2', 'XAGE5', 'OR6M1', 'AMTN', 'OR2M2', 'HIST1H4F', 'C2ORF83', 'ARSF', 'SSX5', 'SFTA3', 'ARHGAP36', 'OR9G4', 'EPPIN', 'SLC1A6', 'ACTR3BP2', 'RESP18', 'OR11H4', 'OR4S1', 'ARR3', 'MBD3L5', 'OR2A2', 'LINC00488', 'CABS1', 'FMR1NB', 'TAAR9', 'PLSCR5', 'HNRNPCL1', 'SNORD89', 'TSGA13', 'ACTRT2', 'ZPBP', 'PROKR1', 'GH1', 'LINC01101', 'KRT13', 'BPIFA3', 'OPN1MW', 'OR4D9', 'SNORA70B', 'DEFB126', 'LINC00934', 'PROP1', 'SNORA1', 'FAM27B', 'OR8G5', 'CLCA4', 'ZIM3', 'PWAR4', 'CASC8', 'GABRG3', 'TRHR', 'CLRN2', 'ADGRG7', 'SPATA31C1', 'PRAMEF20', 'RGS8', 'RTP2', 'STATH', 'TCERG1L', 'ZAR1', 'COL6A4P1', 'MYBPHL', 'TMEM72', 'OR8G2', 'KRTAP25-1', 'OR2M4', 'CYP2W1', 'KRTAP19-8', 'SVOP', 'WFDC8', 'LINC00114', 'OR8H2', 'SLC38A8', 'OR2M7', 'SERPINB3', 'SLC32A1', 'LHX9', 'HYALP1', 'LINC00636', 'GYPB', 'NKAIN3', 'OR2T35', 'KRTAP6-1', 'HBD', 'KCNQ1DN', 'OR4C16', 'KRTAP19-2', 'DUXA', 'OR6Y1', 'IQCJ', 'LGI3', 'SPACA7', 'DAOA', 'OR7A17', 'FAM169B', 'OR2L8', 'HSFY2', 'SPANXA2', 'PPY2P', 'B3GNT6', 'DEFB104A', 'UGT2A3', 'OR6B3', 'TCP10', 'OR4K17', 'RHAG', 'SNORA38B', 'CTRB1', 'KRT3', 'INS', 'LINC00200', 'SPDYC', 'PRKAG3', 'OLIG1', 'KRTAP10-12', 'MYH1', 'LINC01566', 'FAM71C', 'LINC01565', 'PABPC1L2A', 'TRPV5', 'FDCSP', 'OR8J3', 'FTMT', 'INSM2', 'NEU2', 'TBC1D3P2', 'PPIAL4E', 'DYDC1', 'SFTPC', 'PRR27', 'MYF5', 'ACER1', 'DEFB129', 'HPD', 'IVL', 'C9ORF135', 'SNORD115-26', 'FBXW12', 'C3ORF30', 'IL13', 'MMD2', 'SLC51B', 'ITIH1', 'TEX13B', 'OR2AT4', 'HMX3', 'DNTT', 'CT47A1', 'OR6B2', 'KRTAP4-3', 'GSTA5', 'FAM27L', 'GPR148', 'OR1K1', 'LINC00602', 'AVPR1B', 'PRG1', 'C11ORF94', 'APOC3', 'LCN9', 'CYP2C18', 'SCARNA8', 'TAS2R60', 'KRTAP10-7', 'ZFAT-AS1', 'UCMA', 'SCN1A', 'LINC00113', 'FTHL17', 'HHLA1', 'LCE1D', 'PYDC2', 'OR11L1', 'GUCY2EP', 'CYLC2', 'KRTAP10-1', 'CSNK1A1P1', 'CCDC37', 'OR5M10', 'SPINK1', 'PSKH2', 'SULT1C3', 'CYP11B2', 'SNORD94', 'CYP7A1', 'CCK', 'SLC25A31', 'C20ORF173', 'OR5M8', 'LRRTM1', 'LOC729609', 'EPB42', 'TTTY8', 'TTTY9B', 'SLC17A6', 'EPGN', 'LYZL1', 'CGB8', 'SNORA77', 'CHIAP2', 'SPATA19', 'FAM138D', 'OLFM3', 'PCGEM1', 'UGT1A4', 'GBX2', 'SBSN', 'ACOT12', 'HBG2', 'CPLX3', 'REG4', 'PSG11', 'CNTNAP4', 'KRTAP21-1', 'SNORA47', 'KRTAP3-2', 'FFAR1', 'ABRA', 'TMEM202', 'HAO1', 'BOLL', 'ANGPTL3', 'ASAP1-IT1', 'SNCB', 'MMP20', 'LCN1', 'OR52K1', 'PRAMEF1', 'SPACA3', 'MUSK', 'PRDM9', 'SLITRK3', 'FOXN3-AS2', 'CCDC166', 'OR6K6', 'AADAC', 'KRTAP19-6', 'OR51G2', 'INSC', 'CCL24', 'UGT2B28', 'NKX2-1', 'OR2W1', 'DPRX', 'DPPA5', 'SNAR-F', 'MGC27382', 'CFHR4', 'NCAN', 'BRINP3', 'AWAT1', 'FOXD4L3', 'LOC285847', 'KRTAP2-1', 'CRLF2', 'DEFB123', 'BMP15', 'C1ORF94', 'IL17F', 'ENAM', 'TSKS', 'IQCF6', 'DPPA2', 'OR4C12', 'SPRR2E', 'DUSP21', 'LINC00923', 'APCS', 'KCNIP4-IT1', 'GRK1', 'OR51I2', 'PRSS54', 'MAGEA5', 'CRYGB', 'GAGE12F', 'ARL13A', 'OR56A1', 'MAP3K15', 'ASB11', 'DKFZP434K028', 'OR5H1', 'KRT25', 'NYX', 'CA6', 'NTS', 'C10ORF120', 'GCSAML-AS1', 'SLC10A1', 'SLC6A5', 'RPL3L', 'KRTAP10-6', 'IZUMO1R', 'MMP23A', 'MTNR1B', 'DAW1', 'BANF2', 'PROKR2', 'FAM74A3', 'NXNL1', 'TMPRSS12', 'OR6K2', 'PAPOLB', 'KRTAP10-3', 'OR12D2', 'AQP2', 'CD200R1L', 'FAM138B', 'OR6C2', 'LINC01312', 'LINC00410', 'IGLL3P', 'ADAM29', 'TFF2', 'NUTM1', 'SLURP1', 'KRTAP19-3', 'KRTAP5-4', 'AKR1C8P', 'TMEM88B', 'GOLGA6L1', 'OR4D5', 'KCNMB2', 'OTOL1', 'GRIN2B', 'YWHAEP7', 'ANP32D', 'OR1L1', 'TTTY15', 'SFTPB', 'NMUR2', 'IL3', 'OR51F2', 'YIPF7', 'USP9Y', 'CSN3', 'FAM71B', 'NEUROD1', 'OR2T10', 'OR2M3', 'OR10W1', 'ZNF705A', 'GPHA2', 'HBE1', 'SLC22A10', 'SNAR-G1', 'SNORA59B', 'PRB4', 'LRRC30', 'RBPJL', 'MAGEA9B', 'OR1B1', 'TARM1', 'AMER3', 'OR51B5', 'EDDM3B', 'TRIM48', 'GABRR3', 'IL36RN', 'URAD', 'RPS4Y2', 'KRTAP9-2', 'SDR16C6P', 'SLC9C1', 'SCTR', 'OCSTAMP', 'OR52R1', 'C16ORF90', 'PLA2G12B', 'NKX2-3', 'MUC2', 'SPANXN3', 'OR6A2', 'COX7B2', 'SYT14P1', 'OR7D4', 'SNORA76C', 'USH1C', 'TNP1', 'SPZ1', 'SNORD15B', 'AKR1D1', 'OR8I2', 'PSG4', 'BCYRN1', 'SHH', 'CCL15-CCL14', 'B4GALNT2', 'HULC', 'TBC1D21', 'OR13C9', 'FIGLA', 'ZNF679', 'OR5M3', 'PTH2', 'OR2L1P', 'TCEB3C', 'DEFB124', 'TRHDE', 'ANKRD34C', 'DEFB113', 'DMP1', 'GKN2', 'SNAR-I', 'CD300LD', 'DDI1', 'SNAR-E', 'GPR22', 'BPIFB4', 'CTRB2', 'CPA2', 'ADGRD2', 'KRTAP1-5', 'XKR7', 'OR10G8', 'BPIFB3', 'PPP1R2P9', 'SNORA36A', 'FKBP6', 'VIL1', 'SLC36A3', 'PCDH8', 'FAM41AY1', 'ACSM2B', 'AADACL3', 'SNORD97', 'NEUROD6', 'LINC00520', 'MAGEA1', 'CHRNB3', 'OR2AG1', 'OR4D2', 'C12ORF50', 'PRAC1', 'SH2D7', 'OACYLP', 'DISC2', 'NXPE1', 'USP50', 'BHLHE23', 'MYH7', 'CALCB', 'LOC284798', 'DEFB110', 'RAPGEF4-AS1', 'AIRE', 'KGFLP1', 'RFX6', 'CPNE4', 'CNGB1', 'CETN1', 'C2ORF27B', 'SSX9', 'SLC5A8', 'C11ORF40', 'LOC400736', 'SLCO1B7', 'TNFSF18', 'KRTAP1-1', 'KRT71', 'PRMT8', 'POU4F1', 'DMRT1', 'FAM183CP', 'KCNK4', 'ASB15', 'SCEL', 'GLYATL3', 'NEUROG3', 'CA5A', 'SNORA27', 'OR2L2', 'XIRP2', 'UGT2B10', 'FAM47C', 'NF1P2', 'DEFB118', 'TRIM75P', 'LINC00029', 'KCNJ16', 'CACNG7', 'HTR1A', 'DSCR10', 'MIR1-1HG', 'OR2A14', 'CD1B', 'OR8D4', 'GAGE2B', 'SPATA3', 'CIB4', 'HYMAI', 'ARL14', 'PRL', 'LOC100132831', 'FMO9P', 'HGC6.3', 'BTF3P11', 'OR52N1', 'SNORA16B', 'CDH10', 'HRK', 'KRTAP11-1', 'LINC00479', 'OR10H2', 'SNORA58', 'C12ORF42', 'LINC00202-2', 'C6ORF10', 'ODF3', 'GFI1B', 'OR1L4', 'OVCH1', 'HSD52', 'POU4F2', 'HIST1H3A', 'FAM19A1', 'HOXC12', 'OR52N2', 'NPB', 'ADRB3', 'HIST2H2AB', 'HIST1H3F', 'RAET1L', 'SNORA2B', 'HCRTR2', 'SPOCK3', 'SCARNA1', 'GPR52', 'SLC39A12', 'ANKRD20A20P', 'XAGE3', 'HTR2C', 'IFNL1', 'GSC2', 'DEFB109P1', 'CLRN1-AS1', 'SPINT3', 'HPVC1', 'HHATL', 'CYP2A7', 'SLC2A2', 'OR2A12', 'HIST1H2BM', 'RNF222', 'IGFBP1', 'NEUROG1', 'CA4', 'TPSD1', 'SERPINB11', 'NKX6-2', 'OR5H2', 'AATK-AS1', 'KRT12', 'KLRC4', 'LINC00314', 'FOXG1', 'GABBR2', 'SNORA72', 'MYH16', 'LOC647859', 'OR51T1', 'CRYGC', 'OR5M1', 'FOXE3', 'GBA3', 'LINC00710', 'CRISP2', 'EXD1', 'F2', 'TRPM3', 'CLCA3P', 'SLC13A1', 'LOC285627', 'CGB2', 'MROH5', 'LINC00452', 'LINC00964', 'PLD5', 'LINC00691', 'KRTAP12-1', 'OR51L1', 'LOC400940', 'OR4N4', 'MYL1', 'TMEM207', 'FAM170A', 'SCGB3A2', 'PTCHD3', 'NYAP2', 'OR51A2', 'C5ORF47', 'FAM92A1P2', 'IGLL1', 'FRMPD2', 'HBM', 'POU4F3', 'POU6F2', 'PRSS48', 'TSHB', 'LINC01105', 'OR10AD1', 'FOXI3', 'SNORA68', 'STON1-GTF2A1L', 'S100A12', 'B3GALT1', 'TKTL2', 'C12ORF56', 'C1ORF146', 'MEP1A', 'OR3A2', 'MT1B', 'CACNG3', 'LOC100130417', 'ALAS2', 'DPP10', 'MAGEA11', 'SLC22A12', 'INS-IGF2', 'PRAMEF14', 'ART1', 'OR13C2', 'SSX8', 'CLEC18C', 'ZIC5', 'OR5A1', 'GH2', 'GPRC6A', 'MYH4', 'OR5E1P', 'OR52K2', 'OR13H1', 'MAGEB4', 'PAQR9', 'HIST1H3B', 'LOC391343', 'C11ORF87', 'CCL7', 'CWH43', 'PDX1', 'VSTM5', 'NHLH2', 'SPANXN2', 'HMHB1', 'PCSK2', 'FGF16', 'FAM9B', 'SNORA64', 'PAEP', 'FAM71E2', 'FEZF1', 'PATE3', 'FRG2DP', 'DACH2', 'DAPL1', 'LOC100130264', 'LOC100129055', 'MYADML', 'FEZF2', 'MMP21', 'ABCA13', 'TBATA', 'SNORA16A', 'HIST1H4B', 'CYP1A2', 'BRDT', 'LINC00608', 'OTC', 'IFNE', 'CASR', 'MAGEA12', 'GABRA3', 'SLITRK1', 'GABRB1', 'OR52A1', 'KLK12', 'IFNL2', 'TAS2R42', 'SPRR1B', 'C4ORF51', 'GJA10', 'OR12D3', 'GJB7', 'GPR61', 'MYL2', 'TBX20', 'OR2T2', 'KAAG1', 'SPRR2G', 'VAX1', 'ISL1', 'C17ORF78', 'GCKR', 'RNF151', 'LINC00652', 'KRT18P55', 'PLCZ1', 'OR7A5', 'KRTAP10-4', 'OR9K2', 'ADCYAP1R1', 'S100A7', 'ZG16', 'KRTAP4-5', 'FOXR1', 'KRT73', 'CST13P', 'OPRM1', 'SPINK14', 'FSHR', 'OR5K1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 1.7957569109156364e-15 NRMSE: 6.506837129196451e-16 MAPE: 1.1062279280044574e-11 Pearson Correlation: 0.04048711737185791 Spearman Correlation: 0.08522583162618283 Coefficient of Determination: -1.6983454250273708 RMSE: 0.6358430490868376 NRMSE: 0.3349768719802956 MAPE: 873.9657584706852 Predictor: ElasticNet Pearson Correlation: 0.814299609700057 Spearman Correlation: 0.7824502250867776 Coefficient of Determination: 0.5919146790745793 RMSE: 0.23514691317181552 NRMSE: 0.08520433117320658 MAPE: 658.2432272270589 Pearson Correlation: 0.1105736333111555 Spearman Correlation: 0.16259877085162425 Coefficient of Determination: -0.018499954359224136 RMSE: 0.390644453747853 NRMSE: 0.20580056251434437 MAPE: 166.6658416007406 Predictor: RandomForests Pearson Correlation: 0.5640727653302698 Spearman Correlation: 0.47659995417478396 Coefficient of Determination: 0.16220870221404982 RMSE: 0.3369238214718678 NRMSE: 0.12208269493146888 MAPE: 177.1206300199472 Pearson Correlation: 0.18444530859807956 Spearman Correlation: 0.207945566286216 Coefficient of Determination: 0.025325637349982277 RMSE: 0.3821474158423136 NRMSE: 0.20132412578552691 MAPE: 123.5707234469332 Protein: CDH3 x_train_column_count: 1030 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'OR8B3', 'LGALS14', 'OR52A4P', 'OR52B4', 'CT45A1', 'ARL5C', 'GYS2', 'SERPINI2', 'OR9A2', 'TMEM252', 'TMPRSS11F', 'TMPRSS11B', 'C10ORF53', 'TTTY2', 'MOGAT3', 'SNORA37', 'OR4F15', 'OR6S1', 'OR14C36', 'NXF2B', 'LINC00895', 'F13B', 'CGB5', 'LINC00469', 'HTR5A', 'HBG1', 'TCP10L2', 'IFNA16', 'OR10V1', 'FGA', 'PRSS1', 'ZNF479', 'MAGEB3', 'ZCCHC13', 'PPY', 'SNORA51', 'OR5H14', 'LINC00696', 'RAX2', 'WFDC5', 'OR4A16', 'GPR78', 'CLEC6A', 'ASB17', 'OR5T2', 'VWC2L', 'PSG7', 'ALPPL2', 'SST', 'PLG', 'ANKUB1', 'LINC00575', 'NOX3', 'SCARNA11', 'OR1S2', 'SNORA34', 'PLET1', 'LEUTX', 'LINC00523', 'RPL13AP17', 'OR1N1', 'LOC145845', 'ADAM18', 'TPD52L3', 'LINC01205', 'C18ORF42', 'POTED', 'ALOX12B', 'OR2G2', 'XAGE5', 'OR6M1', 'AMTN', 'OR2M2', 'HIST1H4F', 'C2ORF83', 'ARSF', 'SSX5', 'SFTA3', 'ARHGAP36', 'OR9G4', 'EPPIN', 'SLC1A6', 'ACTR3BP2', 'RESP18', 'OR11H4', 'OR4S1', 'ARR3', 'MBD3L5', 'OR2A2', 'LINC00488', 'CABS1', 'FMR1NB', 'TAAR9', 'PLSCR5', 'HNRNPCL1', 'SNORD89', 'TSGA13', 'ACTRT2', 'ZPBP', 'PROKR1', 'GH1', 'LINC01101', 'KRT13', 'BPIFA3', 'OPN1MW', 'OR4D9', 'SNORA70B', 'DEFB126', 'LINC00934', 'PROP1', 'SNORA1', 'FAM27B', 'OR8G5', 'CLCA4', 'ZIM3', 'PWAR4', 'CASC8', 'GABRG3', 'TRHR', 'CLRN2', 'ADGRG7', 'SPATA31C1', 'PRAMEF20', 'RGS8', 'RTP2', 'STATH', 'TCERG1L', 'ZAR1', 'COL6A4P1', 'MYBPHL', 'TMEM72', 'OR8G2', 'KRTAP25-1', 'OR2M4', 'CYP2W1', 'KRTAP19-8', 'SVOP', 'WFDC8', 'LINC00114', 'OR8H2', 'SLC38A8', 'OR2M7', 'SERPINB3', 'SLC32A1', 'LHX9', 'HYALP1', 'LINC00636', 'GYPB', 'NKAIN3', 'OR2T35', 'KRTAP6-1', 'HBD', 'KCNQ1DN', 'OR4C16', 'KRTAP19-2', 'DUXA', 'OR6Y1', 'IQCJ', 'LGI3', 'SPACA7', 'DAOA', 'OR7A17', 'FAM169B', 'OR2L8', 'HSFY2', 'SPANXA2', 'PPY2P', 'B3GNT6', 'DEFB104A', 'UGT2A3', 'OR6B3', 'TCP10', 'OR4K17', 'RHAG', 'SNORA38B', 'CTRB1', 'KRT3', 'INS', 'LINC00200', 'SPDYC', 'PRKAG3', 'OLIG1', 'KRTAP10-12', 'MYH1', 'LINC01566', 'FAM71C', 'LINC01565', 'PABPC1L2A', 'TRPV5', 'FDCSP', 'OR8J3', 'FTMT', 'INSM2', 'NEU2', 'TBC1D3P2', 'PPIAL4E', 'DYDC1', 'SFTPC', 'PRR27', 'MYF5', 'ACER1', 'DEFB129', 'HPD', 'IVL', 'C9ORF135', 'SNORD115-26', 'FBXW12', 'C3ORF30', 'IL13', 'MMD2', 'SLC51B', 'ITIH1', 'TEX13B', 'OR2AT4', 'HMX3', 'DNTT', 'CT47A1', 'OR6B2', 'KRTAP4-3', 'GSTA5', 'FAM27L', 'GPR148', 'OR1K1', 'LINC00602', 'AVPR1B', 'PRG1', 'C11ORF94', 'APOC3', 'LCN9', 'CYP2C18', 'SCARNA8', 'TAS2R60', 'KRTAP10-7', 'ZFAT-AS1', 'UCMA', 'SCN1A', 'LINC00113', 'FTHL17', 'HHLA1', 'LCE1D', 'PYDC2', 'OR11L1', 'GUCY2EP', 'CYLC2', 'KRTAP10-1', 'CSNK1A1P1', 'CCDC37', 'OR5M10', 'SPINK1', 'PSKH2', 'SULT1C3', 'CYP11B2', 'SNORD94', 'CYP7A1', 'CCK', 'SLC25A31', 'C20ORF173', 'OR5M8', 'LRRTM1', 'LOC729609', 'EPB42', 'TTTY8', 'TTTY9B', 'SLC17A6', 'EPGN', 'LYZL1', 'CGB8', 'SNORA77', 'CHIAP2', 'SPATA19', 'FAM138D', 'OLFM3', 'PCGEM1', 'UGT1A4', 'GBX2', 'SBSN', 'ACOT12', 'HBG2', 'CPLX3', 'REG4', 'PSG11', 'CNTNAP4', 'KRTAP21-1', 'SNORA47', 'KRTAP3-2', 'FFAR1', 'ABRA', 'TMEM202', 'HAO1', 'BOLL', 'ANGPTL3', 'ASAP1-IT1', 'SNCB', 'MMP20', 'LCN1', 'OR52K1', 'PRAMEF1', 'SPACA3', 'MUSK', 'PRDM9', 'SLITRK3', 'FOXN3-AS2', 'CCDC166', 'OR6K6', 'AADAC', 'KRTAP19-6', 'OR51G2', 'INSC', 'CCL24', 'UGT2B28', 'NKX2-1', 'OR2W1', 'DPRX', 'DPPA5', 'SNAR-F', 'MGC27382', 'CFHR4', 'NCAN', 'BRINP3', 'AWAT1', 'FOXD4L3', 'LOC285847', 'KRTAP2-1', 'CRLF2', 'DEFB123', 'BMP15', 'C1ORF94', 'IL17F', 'ENAM', 'TSKS', 'IQCF6', 'DPPA2', 'OR4C12', 'SPRR2E', 'DUSP21', 'LINC00923', 'APCS', 'KCNIP4-IT1', 'GRK1', 'OR51I2', 'PRSS54', 'MAGEA5', 'CRYGB', 'GAGE12F', 'ARL13A', 'OR56A1', 'MAP3K15', 'ASB11', 'DKFZP434K028', 'OR5H1', 'KRT25', 'NYX', 'CA6', 'NTS', 'C10ORF120', 'GCSAML-AS1', 'SLC10A1', 'SLC6A5', 'RPL3L', 'KRTAP10-6', 'IZUMO1R', 'MMP23A', 'MTNR1B', 'DAW1', 'BANF2', 'PROKR2', 'FAM74A3', 'NXNL1', 'TMPRSS12', 'OR6K2', 'PAPOLB', 'KRTAP10-3', 'OR12D2', 'AQP2', 'CD200R1L', 'FAM138B', 'OR6C2', 'LINC01312', 'LINC00410', 'IGLL3P', 'ADAM29', 'TFF2', 'NUTM1', 'SLURP1', 'KRTAP19-3', 'KRTAP5-4', 'AKR1C8P', 'TMEM88B', 'GOLGA6L1', 'OR4D5', 'KCNMB2', 'OTOL1', 'GRIN2B', 'YWHAEP7', 'ANP32D', 'OR1L1', 'TTTY15', 'SFTPB', 'NMUR2', 'IL3', 'OR51F2', 'YIPF7', 'USP9Y', 'CSN3', 'FAM71B', 'NEUROD1', 'OR2T10', 'OR2M3', 'OR10W1', 'ZNF705A', 'GPHA2', 'HBE1', 'SLC22A10', 'SNAR-G1', 'SNORA59B', 'PRB4', 'LRRC30', 'RBPJL', 'MAGEA9B', 'OR1B1', 'TARM1', 'AMER3', 'OR51B5', 'EDDM3B', 'TRIM48', 'GABRR3', 'IL36RN', 'URAD', 'RPS4Y2', 'KRTAP9-2', 'SDR16C6P', 'SLC9C1', 'SCTR', 'OCSTAMP', 'OR52R1', 'C16ORF90', 'PLA2G12B', 'NKX2-3', 'MUC2', 'SPANXN3', 'OR6A2', 'COX7B2', 'SYT14P1', 'OR7D4', 'SNORA76C', 'USH1C', 'TNP1', 'SPZ1', 'SNORD15B', 'AKR1D1', 'OR8I2', 'PSG4', 'BCYRN1', 'SHH', 'CCL15-CCL14', 'B4GALNT2', 'HULC', 'TBC1D21', 'OR13C9', 'FIGLA', 'ZNF679', 'OR5M3', 'PTH2', 'OR2L1P', 'TCEB3C', 'DEFB124', 'TRHDE', 'ANKRD34C', 'DEFB113', 'DMP1', 'GKN2', 'SNAR-I', 'CD300LD', 'DDI1', 'SNAR-E', 'GPR22', 'BPIFB4', 'CTRB2', 'CPA2', 'ADGRD2', 'KRTAP1-5', 'XKR7', 'OR10G8', 'BPIFB3', 'PPP1R2P9', 'SNORA36A', 'FKBP6', 'VIL1', 'SLC36A3', 'PCDH8', 'FAM41AY1', 'ACSM2B', 'AADACL3', 'SNORD97', 'NEUROD6', 'LINC00520', 'MAGEA1', 'CHRNB3', 'OR2AG1', 'OR4D2', 'C12ORF50', 'PRAC1', 'SH2D7', 'OACYLP', 'DISC2', 'NXPE1', 'USP50', 'BHLHE23', 'MYH7', 'CALCB', 'LOC284798', 'DEFB110', 'RAPGEF4-AS1', 'AIRE', 'KGFLP1', 'RFX6', 'CPNE4', 'CNGB1', 'CETN1', 'C2ORF27B', 'SSX9', 'SLC5A8', 'C11ORF40', 'LOC400736', 'SLCO1B7', 'TNFSF18', 'KRTAP1-1', 'KRT71', 'PRMT8', 'POU4F1', 'DMRT1', 'FAM183CP', 'KCNK4', 'ASB15', 'SCEL', 'GLYATL3', 'NEUROG3', 'CA5A', 'SNORA27', 'OR2L2', 'XIRP2', 'UGT2B10', 'FAM47C', 'NF1P2', 'DEFB118', 'TRIM75P', 'LINC00029', 'KCNJ16', 'CACNG7', 'HTR1A', 'DSCR10', 'MIR1-1HG', 'OR2A14', 'CD1B', 'OR8D4', 'GAGE2B', 'SPATA3', 'CIB4', 'HYMAI', 'ARL14', 'PRL', 'LOC100132831', 'FMO9P', 'HGC6.3', 'BTF3P11', 'OR52N1', 'SNORA16B', 'CDH10', 'HRK', 'KRTAP11-1', 'LINC00479', 'OR10H2', 'SNORA58', 'C12ORF42', 'LINC00202-2', 'C6ORF10', 'ODF3', 'GFI1B', 'OR1L4', 'OVCH1', 'HSD52', 'POU4F2', 'HIST1H3A', 'FAM19A1', 'HOXC12', 'OR52N2', 'NPB', 'ADRB3', 'HIST2H2AB', 'HIST1H3F', 'RAET1L', 'SNORA2B', 'HCRTR2', 'SPOCK3', 'SCARNA1', 'GPR52', 'SLC39A12', 'ANKRD20A20P', 'XAGE3', 'HTR2C', 'IFNL1', 'GSC2', 'DEFB109P1', 'CLRN1-AS1', 'SPINT3', 'HPVC1', 'HHATL', 'CYP2A7', 'SLC2A2', 'OR2A12', 'HIST1H2BM', 'RNF222', 'IGFBP1', 'NEUROG1', 'CA4', 'TPSD1', 'SERPINB11', 'NKX6-2', 'OR5H2', 'AATK-AS1', 'KRT12', 'KLRC4', 'LINC00314', 'FOXG1', 'GABBR2', 'SNORA72', 'MYH16', 'LOC647859', 'OR51T1', 'CRYGC', 'OR5M1', 'FOXE3', 'GBA3', 'LINC00710', 'CRISP2', 'EXD1', 'F2', 'TRPM3', 'CLCA3P', 'SLC13A1', 'LOC285627', 'CGB2', 'MROH5', 'LINC00452', 'LINC00964', 'PLD5', 'LINC00691', 'KRTAP12-1', 'OR51L1', 'LOC400940', 'OR4N4', 'MYL1', 'TMEM207', 'FAM170A', 'SCGB3A2', 'PTCHD3', 'NYAP2', 'OR51A2', 'C5ORF47', 'FAM92A1P2', 'IGLL1', 'FRMPD2', 'HBM', 'POU4F3', 'POU6F2', 'PRSS48', 'TSHB', 'LINC01105', 'OR10AD1', 'FOXI3', 'SNORA68', 'STON1-GTF2A1L', 'S100A12', 'B3GALT1', 'TKTL2', 'C12ORF56', 'C1ORF146', 'MEP1A', 'OR3A2', 'MT1B', 'CACNG3', 'LOC100130417', 'ALAS2', 'DPP10', 'MAGEA11', 'SLC22A12', 'INS-IGF2', 'PRAMEF14', 'ART1', 'OR13C2', 'SSX8', 'CLEC18C', 'ZIC5', 'OR5A1', 'GH2', 'GPRC6A', 'MYH4', 'OR5E1P', 'OR52K2', 'OR13H1', 'MAGEB4', 'PAQR9', 'HIST1H3B', 'LOC391343', 'C11ORF87', 'CCL7', 'CWH43', 'PDX1', 'VSTM5', 'NHLH2', 'SPANXN2', 'HMHB1', 'PCSK2', 'FGF16', 'FAM9B', 'SNORA64', 'PAEP', 'FAM71E2', 'FEZF1', 'PATE3', 'FRG2DP', 'DACH2', 'DAPL1', 'LOC100130264', 'LOC100129055', 'MYADML', 'FEZF2', 'MMP21', 'ABCA13', 'TBATA', 'SNORA16A', 'HIST1H4B', 'CYP1A2', 'BRDT', 'LINC00608', 'OTC', 'IFNE', 'CASR', 'MAGEA12', 'GABRA3', 'SLITRK1', 'GABRB1', 'OR52A1', 'KLK12', 'IFNL2', 'TAS2R42', 'SPRR1B', 'C4ORF51', 'GJA10', 'OR12D3', 'GJB7', 'GPR61', 'MYL2', 'TBX20', 'OR2T2', 'KAAG1', 'SPRR2G', 'VAX1', 'ISL1', 'C17ORF78', 'GCKR', 'RNF151', 'LINC00652', 'KRT18P55', 'PLCZ1', 'OR7A5', 'KRTAP10-4', 'OR9K2', 'ADCYAP1R1', 'S100A7', 'ZG16', 'KRTAP4-5', 'FOXR1', 'KRT73', 'CST13P', 'OPRM1', 'SPINK14', 'FSHR', 'OR5K1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 1.0609246674156215e-15 NRMSE: 7.984501497035676e-16 MAPE: 3.8672506981435536e-12 Pearson Correlation: 0.13485733441219314 Spearman Correlation: 0.18187493903033852 Coefficient of Determination: -2.9022569429955936 RMSE: 0.39098856951781596 NRMSE: 0.3217218542893245 MAPE: 4733.153219099118 Predictor: ElasticNet Pearson Correlation: 0.7088215873197364 Spearman Correlation: 0.6870756581005768 Coefficient of Determination: 0.43412586028070344 RMSE: 0.1562465523575283 NRMSE: 0.11759089683948452 MAPE: 226.88130515611604 Pearson Correlation: 0.1751021992684709 Spearman Correlation: 0.22789483952785097 Coefficient of Determination: -0.17577746808890127 RMSE: 0.21461926179968252 NRMSE: 0.1765977633503518 MAPE: 910.3918545318758 Predictor: RandomForests Pearson Correlation: 0.5787066295784826 Spearman Correlation: 0.5924469955850565 Coefficient of Determination: 0.28694248694998614 RMSE: 0.17539321935852764 NRMSE: 0.1320006467518063 MAPE: 292.91461301232243 Pearson Correlation: 0.18678756700263555 Spearman Correlation: 0.29491269144473714 Coefficient of Determination: -0.13326239831011222 RMSE: 0.2107033155740488 NRMSE: 0.173375557947872 MAPE: 936.1404160232647 Protein: PTEN x_train_column_count: 1030 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'OR8B3', 'LGALS14', 'OR52A4P', 'OR52B4', 'CT45A1', 'ARL5C', 'GYS2', 'SERPINI2', 'OR9A2', 'TMEM252', 'TMPRSS11F', 'TMPRSS11B', 'C10ORF53', 'TTTY2', 'MOGAT3', 'SNORA37', 'OR4F15', 'OR6S1', 'OR14C36', 'NXF2B', 'LINC00895', 'F13B', 'CGB5', 'LINC00469', 'HTR5A', 'HBG1', 'TCP10L2', 'IFNA16', 'OR10V1', 'FGA', 'PRSS1', 'ZNF479', 'MAGEB3', 'ZCCHC13', 'PPY', 'SNORA51', 'OR5H14', 'LINC00696', 'RAX2', 'WFDC5', 'OR4A16', 'GPR78', 'CLEC6A', 'ASB17', 'OR5T2', 'VWC2L', 'PSG7', 'ALPPL2', 'SST', 'PLG', 'ANKUB1', 'LINC00575', 'NOX3', 'SCARNA11', 'OR1S2', 'SNORA34', 'PLET1', 'LEUTX', 'LINC00523', 'RPL13AP17', 'OR1N1', 'LOC145845', 'ADAM18', 'TPD52L3', 'LINC01205', 'C18ORF42', 'POTED', 'ALOX12B', 'OR2G2', 'XAGE5', 'OR6M1', 'AMTN', 'OR2M2', 'HIST1H4F', 'C2ORF83', 'ARSF', 'SSX5', 'SFTA3', 'ARHGAP36', 'OR9G4', 'EPPIN', 'SLC1A6', 'ACTR3BP2', 'RESP18', 'OR11H4', 'OR4S1', 'ARR3', 'MBD3L5', 'OR2A2', 'LINC00488', 'CABS1', 'FMR1NB', 'TAAR9', 'PLSCR5', 'HNRNPCL1', 'SNORD89', 'TSGA13', 'ACTRT2', 'ZPBP', 'PROKR1', 'GH1', 'LINC01101', 'KRT13', 'BPIFA3', 'OPN1MW', 'OR4D9', 'SNORA70B', 'DEFB126', 'LINC00934', 'PROP1', 'SNORA1', 'FAM27B', 'OR8G5', 'CLCA4', 'ZIM3', 'PWAR4', 'CASC8', 'GABRG3', 'TRHR', 'CLRN2', 'ADGRG7', 'SPATA31C1', 'PRAMEF20', 'RGS8', 'RTP2', 'STATH', 'TCERG1L', 'ZAR1', 'COL6A4P1', 'MYBPHL', 'TMEM72', 'OR8G2', 'KRTAP25-1', 'OR2M4', 'CYP2W1', 'KRTAP19-8', 'SVOP', 'WFDC8', 'LINC00114', 'OR8H2', 'SLC38A8', 'OR2M7', 'SERPINB3', 'SLC32A1', 'LHX9', 'HYALP1', 'LINC00636', 'GYPB', 'NKAIN3', 'OR2T35', 'KRTAP6-1', 'HBD', 'KCNQ1DN', 'OR4C16', 'KRTAP19-2', 'DUXA', 'OR6Y1', 'IQCJ', 'LGI3', 'SPACA7', 'DAOA', 'OR7A17', 'FAM169B', 'OR2L8', 'HSFY2', 'SPANXA2', 'PPY2P', 'B3GNT6', 'DEFB104A', 'UGT2A3', 'OR6B3', 'TCP10', 'OR4K17', 'RHAG', 'SNORA38B', 'CTRB1', 'KRT3', 'INS', 'LINC00200', 'SPDYC', 'PRKAG3', 'OLIG1', 'KRTAP10-12', 'MYH1', 'LINC01566', 'FAM71C', 'LINC01565', 'PABPC1L2A', 'TRPV5', 'FDCSP', 'OR8J3', 'FTMT', 'INSM2', 'NEU2', 'TBC1D3P2', 'PPIAL4E', 'DYDC1', 'SFTPC', 'PRR27', 'MYF5', 'ACER1', 'DEFB129', 'HPD', 'IVL', 'C9ORF135', 'SNORD115-26', 'FBXW12', 'C3ORF30', 'IL13', 'MMD2', 'SLC51B', 'ITIH1', 'TEX13B', 'OR2AT4', 'HMX3', 'DNTT', 'CT47A1', 'OR6B2', 'KRTAP4-3', 'GSTA5', 'FAM27L', 'GPR148', 'OR1K1', 'LINC00602', 'AVPR1B', 'PRG1', 'C11ORF94', 'APOC3', 'LCN9', 'CYP2C18', 'SCARNA8', 'TAS2R60', 'KRTAP10-7', 'ZFAT-AS1', 'UCMA', 'SCN1A', 'LINC00113', 'FTHL17', 'HHLA1', 'LCE1D', 'PYDC2', 'OR11L1', 'GUCY2EP', 'CYLC2', 'KRTAP10-1', 'CSNK1A1P1', 'CCDC37', 'OR5M10', 'SPINK1', 'PSKH2', 'SULT1C3', 'CYP11B2', 'SNORD94', 'CYP7A1', 'CCK', 'SLC25A31', 'C20ORF173', 'OR5M8', 'LRRTM1', 'LOC729609', 'EPB42', 'TTTY8', 'TTTY9B', 'SLC17A6', 'EPGN', 'LYZL1', 'CGB8', 'SNORA77', 'CHIAP2', 'SPATA19', 'FAM138D', 'OLFM3', 'PCGEM1', 'UGT1A4', 'GBX2', 'SBSN', 'ACOT12', 'HBG2', 'CPLX3', 'REG4', 'PSG11', 'CNTNAP4', 'KRTAP21-1', 'SNORA47', 'KRTAP3-2', 'FFAR1', 'ABRA', 'TMEM202', 'HAO1', 'BOLL', 'ANGPTL3', 'ASAP1-IT1', 'SNCB', 'MMP20', 'LCN1', 'OR52K1', 'PRAMEF1', 'SPACA3', 'MUSK', 'PRDM9', 'SLITRK3', 'FOXN3-AS2', 'CCDC166', 'OR6K6', 'AADAC', 'KRTAP19-6', 'OR51G2', 'INSC', 'CCL24', 'UGT2B28', 'NKX2-1', 'OR2W1', 'DPRX', 'DPPA5', 'SNAR-F', 'MGC27382', 'CFHR4', 'NCAN', 'BRINP3', 'AWAT1', 'FOXD4L3', 'LOC285847', 'KRTAP2-1', 'CRLF2', 'DEFB123', 'BMP15', 'C1ORF94', 'IL17F', 'ENAM', 'TSKS', 'IQCF6', 'DPPA2', 'OR4C12', 'SPRR2E', 'DUSP21', 'LINC00923', 'APCS', 'KCNIP4-IT1', 'GRK1', 'OR51I2', 'PRSS54', 'MAGEA5', 'CRYGB', 'GAGE12F', 'ARL13A', 'OR56A1', 'MAP3K15', 'ASB11', 'DKFZP434K028', 'OR5H1', 'KRT25', 'NYX', 'CA6', 'NTS', 'C10ORF120', 'GCSAML-AS1', 'SLC10A1', 'SLC6A5', 'RPL3L', 'KRTAP10-6', 'IZUMO1R', 'MMP23A', 'MTNR1B', 'DAW1', 'BANF2', 'PROKR2', 'FAM74A3', 'NXNL1', 'TMPRSS12', 'OR6K2', 'PAPOLB', 'KRTAP10-3', 'OR12D2', 'AQP2', 'CD200R1L', 'FAM138B', 'OR6C2', 'LINC01312', 'LINC00410', 'IGLL3P', 'ADAM29', 'TFF2', 'NUTM1', 'SLURP1', 'KRTAP19-3', 'KRTAP5-4', 'AKR1C8P', 'TMEM88B', 'GOLGA6L1', 'OR4D5', 'KCNMB2', 'OTOL1', 'GRIN2B', 'YWHAEP7', 'ANP32D', 'OR1L1', 'TTTY15', 'SFTPB', 'NMUR2', 'IL3', 'OR51F2', 'YIPF7', 'USP9Y', 'CSN3', 'FAM71B', 'NEUROD1', 'OR2T10', 'OR2M3', 'OR10W1', 'ZNF705A', 'GPHA2', 'HBE1', 'SLC22A10', 'SNAR-G1', 'SNORA59B', 'PRB4', 'LRRC30', 'RBPJL', 'MAGEA9B', 'OR1B1', 'TARM1', 'AMER3', 'OR51B5', 'EDDM3B', 'TRIM48', 'GABRR3', 'IL36RN', 'URAD', 'RPS4Y2', 'KRTAP9-2', 'SDR16C6P', 'SLC9C1', 'SCTR', 'OCSTAMP', 'OR52R1', 'C16ORF90', 'PLA2G12B', 'NKX2-3', 'MUC2', 'SPANXN3', 'OR6A2', 'COX7B2', 'SYT14P1', 'OR7D4', 'SNORA76C', 'USH1C', 'TNP1', 'SPZ1', 'SNORD15B', 'AKR1D1', 'OR8I2', 'PSG4', 'BCYRN1', 'SHH', 'CCL15-CCL14', 'B4GALNT2', 'HULC', 'TBC1D21', 'OR13C9', 'FIGLA', 'ZNF679', 'OR5M3', 'PTH2', 'OR2L1P', 'TCEB3C', 'DEFB124', 'TRHDE', 'ANKRD34C', 'DEFB113', 'DMP1', 'GKN2', 'SNAR-I', 'CD300LD', 'DDI1', 'SNAR-E', 'GPR22', 'BPIFB4', 'CTRB2', 'CPA2', 'ADGRD2', 'KRTAP1-5', 'XKR7', 'OR10G8', 'BPIFB3', 'PPP1R2P9', 'SNORA36A', 'FKBP6', 'VIL1', 'SLC36A3', 'PCDH8', 'FAM41AY1', 'ACSM2B', 'AADACL3', 'SNORD97', 'NEUROD6', 'LINC00520', 'MAGEA1', 'CHRNB3', 'OR2AG1', 'OR4D2', 'C12ORF50', 'PRAC1', 'SH2D7', 'OACYLP', 'DISC2', 'NXPE1', 'USP50', 'BHLHE23', 'MYH7', 'CALCB', 'LOC284798', 'DEFB110', 'RAPGEF4-AS1', 'AIRE', 'KGFLP1', 'RFX6', 'CPNE4', 'CNGB1', 'CETN1', 'C2ORF27B', 'SSX9', 'SLC5A8', 'C11ORF40', 'LOC400736', 'SLCO1B7', 'TNFSF18', 'KRTAP1-1', 'KRT71', 'PRMT8', 'POU4F1', 'DMRT1', 'FAM183CP', 'KCNK4', 'ASB15', 'SCEL', 'GLYATL3', 'NEUROG3', 'CA5A', 'SNORA27', 'OR2L2', 'XIRP2', 'UGT2B10', 'FAM47C', 'NF1P2', 'DEFB118', 'TRIM75P', 'LINC00029', 'KCNJ16', 'CACNG7', 'HTR1A', 'DSCR10', 'MIR1-1HG', 'OR2A14', 'CD1B', 'OR8D4', 'GAGE2B', 'SPATA3', 'CIB4', 'HYMAI', 'ARL14', 'PRL', 'LOC100132831', 'FMO9P', 'HGC6.3', 'BTF3P11', 'OR52N1', 'SNORA16B', 'CDH10', 'HRK', 'KRTAP11-1', 'LINC00479', 'OR10H2', 'SNORA58', 'C12ORF42', 'LINC00202-2', 'C6ORF10', 'ODF3', 'GFI1B', 'OR1L4', 'OVCH1', 'HSD52', 'POU4F2', 'HIST1H3A', 'FAM19A1', 'HOXC12', 'OR52N2', 'NPB', 'ADRB3', 'HIST2H2AB', 'HIST1H3F', 'RAET1L', 'SNORA2B', 'HCRTR2', 'SPOCK3', 'SCARNA1', 'GPR52', 'SLC39A12', 'ANKRD20A20P', 'XAGE3', 'HTR2C', 'IFNL1', 'GSC2', 'DEFB109P1', 'CLRN1-AS1', 'SPINT3', 'HPVC1', 'HHATL', 'CYP2A7', 'SLC2A2', 'OR2A12', 'HIST1H2BM', 'RNF222', 'IGFBP1', 'NEUROG1', 'CA4', 'TPSD1', 'SERPINB11', 'NKX6-2', 'OR5H2', 'AATK-AS1', 'KRT12', 'KLRC4', 'LINC00314', 'FOXG1', 'GABBR2', 'SNORA72', 'MYH16', 'LOC647859', 'OR51T1', 'CRYGC', 'OR5M1', 'FOXE3', 'GBA3', 'LINC00710', 'CRISP2', 'EXD1', 'F2', 'TRPM3', 'CLCA3P', 'SLC13A1', 'LOC285627', 'CGB2', 'MROH5', 'LINC00452', 'LINC00964', 'PLD5', 'LINC00691', 'KRTAP12-1', 'OR51L1', 'LOC400940', 'OR4N4', 'MYL1', 'TMEM207', 'FAM170A', 'SCGB3A2', 'PTCHD3', 'NYAP2', 'OR51A2', 'C5ORF47', 'FAM92A1P2', 'IGLL1', 'FRMPD2', 'HBM', 'POU4F3', 'POU6F2', 'PRSS48', 'TSHB', 'LINC01105', 'OR10AD1', 'FOXI3', 'SNORA68', 'STON1-GTF2A1L', 'S100A12', 'B3GALT1', 'TKTL2', 'C12ORF56', 'C1ORF146', 'MEP1A', 'OR3A2', 'MT1B', 'CACNG3', 'LOC100130417', 'ALAS2', 'DPP10', 'MAGEA11', 'SLC22A12', 'INS-IGF2', 'PRAMEF14', 'ART1', 'OR13C2', 'SSX8', 'CLEC18C', 'ZIC5', 'OR5A1', 'GH2', 'GPRC6A', 'MYH4', 'OR5E1P', 'OR52K2', 'OR13H1', 'MAGEB4', 'PAQR9', 'HIST1H3B', 'LOC391343', 'C11ORF87', 'CCL7', 'CWH43', 'PDX1', 'VSTM5', 'NHLH2', 'SPANXN2', 'HMHB1', 'PCSK2', 'FGF16', 'FAM9B', 'SNORA64', 'PAEP', 'FAM71E2', 'FEZF1', 'PATE3', 'FRG2DP', 'DACH2', 'DAPL1', 'LOC100130264', 'LOC100129055', 'MYADML', 'FEZF2', 'MMP21', 'ABCA13', 'TBATA', 'SNORA16A', 'HIST1H4B', 'CYP1A2', 'BRDT', 'LINC00608', 'OTC', 'IFNE', 'CASR', 'MAGEA12', 'GABRA3', 'SLITRK1', 'GABRB1', 'OR52A1', 'KLK12', 'IFNL2', 'TAS2R42', 'SPRR1B', 'C4ORF51', 'GJA10', 'OR12D3', 'GJB7', 'GPR61', 'MYL2', 'TBX20', 'OR2T2', 'KAAG1', 'SPRR2G', 'VAX1', 'ISL1', 'C17ORF78', 'GCKR', 'RNF151', 'LINC00652', 'KRT18P55', 'PLCZ1', 'OR7A5', 'KRTAP10-4', 'OR9K2', 'ADCYAP1R1', 'S100A7', 'ZG16', 'KRTAP4-5', 'FOXR1', 'KRT73', 'CST13P', 'OPRM1', 'SPINK14', 'FSHR', 'OR5K1', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 3.14215945459869e-15 NRMSE: 4.913078656240622e-16 MAPE: 3.93104366184848e-12 Pearson Correlation: 0.23003702293521547 Spearman Correlation: 0.2716564237635353 Coefficient of Determination: -2.391288705277137 RMSE: 0.9421900727417428 NRMSE: 0.3160015001146173 MAPE: 3757.550572095545 Predictor: ElasticNet Pearson Correlation: 0.8696606662994667 Spearman Correlation: 0.8357303067433697 Coefficient of Determination: 0.7131463604154863 RMSE: 0.33407230782442976 NRMSE: 0.05223552620192788 MAPE: 247.0992159940815 Pearson Correlation: 0.3503977352192225 Spearman Correlation: 0.33670861379377626 Coefficient of Determination: 0.04022068231689935 RMSE: 0.5012355156153444 NRMSE: 0.16810957727909326 MAPE: 274.74657530694003 Predictor: RandomForests Pearson Correlation: 0.5678857971911857 Spearman Correlation: 0.5596679377913778 Coefficient of Determination: 0.2877900994378546 RMSE: 0.5263980820920889 NRMSE: 0.08230757283904135 MAPE: 256.9078935306161 Pearson Correlation: 0.3149428748459041 Spearman Correlation: 0.32723259747079947 Coefficient of Determination: 0.08802500890790432 RMSE: 0.4885934119405712 NRMSE: 0.16386953714132388 MAPE: 563.3185924874291 Protein: BRCA2 x_train_column_count: 1030 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'OR8B3', 'LGALS14', 'OR52A4P', 'OR52B4', 'CT45A1', 'ARL5C', 'GYS2', 'SERPINI2', 'OR9A2', 'TMEM252', 'TMPRSS11F', 'TMPRSS11B', 'C10ORF53', 'TTTY2', 'MOGAT3', 'SNORA37', 'OR4F15', 'OR6S1', 'OR14C36', 'NXF2B', 'LINC00895', 'F13B', 'CGB5', 'LINC00469', 'HTR5A', 'HBG1', 'TCP10L2', 'IFNA16', 'OR10V1', 'FGA', 'PRSS1', 'ZNF479', 'MAGEB3', 'ZCCHC13', 'PPY', 'SNORA51', 'OR5H14', 'LINC00696', 'RAX2', 'WFDC5', 'OR4A16', 'GPR78', 'CLEC6A', 'ASB17', 'OR5T2', 'VWC2L', 'PSG7', 'ALPPL2', 'SST', 'PLG', 'ANKUB1', 'LINC00575', 'NOX3', 'SCARNA11', 'OR1S2', 'SNORA34', 'PLET1', 'LEUTX', 'LINC00523', 'RPL13AP17', 'OR1N1', 'LOC145845', 'ADAM18', 'TPD52L3', 'LINC01205', 'C18ORF42', 'POTED', 'ALOX12B', 'OR2G2', 'XAGE5', 'OR6M1', 'AMTN', 'OR2M2', 'HIST1H4F', 'C2ORF83', 'ARSF', 'SSX5', 'SFTA3', 'ARHGAP36', 'OR9G4', 'EPPIN', 'SLC1A6', 'ACTR3BP2', 'RESP18', 'OR11H4', 'OR4S1', 'ARR3', 'MBD3L5', 'OR2A2', 'LINC00488', 'CABS1', 'FMR1NB', 'TAAR9', 'PLSCR5', 'HNRNPCL1', 'SNORD89', 'TSGA13', 'ACTRT2', 'ZPBP', 'PROKR1', 'GH1', 'LINC01101', 'KRT13', 'BPIFA3', 'OPN1MW', 'OR4D9', 'SNORA70B', 'DEFB126', 'LINC00934', 'PROP1', 'SNORA1', 'FAM27B', 'OR8G5', 'CLCA4', 'ZIM3', 'PWAR4', 'CASC8', 'GABRG3', 'TRHR', 'CLRN2', 'ADGRG7', 'SPATA31C1', 'PRAMEF20', 'RGS8', 'RTP2', 'STATH', 'TCERG1L', 'ZAR1', 'COL6A4P1', 'MYBPHL', 'TMEM72', 'OR8G2', 'KRTAP25-1', 'OR2M4', 'CYP2W1', 'KRTAP19-8', 'SVOP', 'WFDC8', 'LINC00114', 'OR8H2', 'SLC38A8', 'OR2M7', 'SERPINB3', 'SLC32A1', 'LHX9', 'HYALP1', 'LINC00636', 'GYPB', 'NKAIN3', 'OR2T35', 'KRTAP6-1', 'HBD', 'KCNQ1DN', 'OR4C16', 'KRTAP19-2', 'DUXA', 'OR6Y1', 'IQCJ', 'LGI3', 'SPACA7', 'DAOA', 'OR7A17', 'FAM169B', 'OR2L8', 'HSFY2', 'SPANXA2', 'PPY2P', 'B3GNT6', 'DEFB104A', 'UGT2A3', 'OR6B3', 'TCP10', 'OR4K17', 'RHAG', 'SNORA38B', 'CTRB1', 'KRT3', 'INS', 'LINC00200', 'SPDYC', 'PRKAG3', 'OLIG1', 'KRTAP10-12', 'MYH1', 'LINC01566', 'FAM71C', 'LINC01565', 'PABPC1L2A', 'TRPV5', 'FDCSP', 'OR8J3', 'FTMT', 'INSM2', 'NEU2', 'TBC1D3P2', 'PPIAL4E', 'DYDC1', 'SFTPC', 'PRR27', 'MYF5', 'ACER1', 'DEFB129', 'HPD', 'IVL', 'C9ORF135', 'SNORD115-26', 'FBXW12', 'C3ORF30', 'IL13', 'MMD2', 'SLC51B', 'ITIH1', 'TEX13B', 'OR2AT4', 'HMX3', 'DNTT', 'CT47A1', 'OR6B2', 'KRTAP4-3', 'GSTA5', 'FAM27L', 'GPR148', 'OR1K1', 'LINC00602', 'AVPR1B', 'PRG1', 'C11ORF94', 'APOC3', 'LCN9', 'CYP2C18', 'SCARNA8', 'TAS2R60', 'KRTAP10-7', 'ZFAT-AS1', 'UCMA', 'SCN1A', 'LINC00113', 'FTHL17', 'HHLA1', 'LCE1D', 'PYDC2', 'OR11L1', 'GUCY2EP', 'CYLC2', 'KRTAP10-1', 'CSNK1A1P1', 'CCDC37', 'OR5M10', 'SPINK1', 'PSKH2', 'SULT1C3', 'CYP11B2', 'SNORD94', 'CYP7A1', 'CCK', 'SLC25A31', 'C20ORF173', 'OR5M8', 'LRRTM1', 'LOC729609', 'EPB42', 'TTTY8', 'TTTY9B', 'SLC17A6', 'EPGN', 'LYZL1', 'CGB8', 'SNORA77', 'CHIAP2', 'SPATA19', 'FAM138D', 'OLFM3', 'PCGEM1', 'UGT1A4', 'GBX2', 'SBSN', 'ACOT12', 'HBG2', 'CPLX3', 'REG4', 'PSG11', 'CNTNAP4', 'KRTAP21-1', 'SNORA47', 'KRTAP3-2', 'FFAR1', 'ABRA', 'TMEM202', 'HAO1', 'BOLL', 'ANGPTL3', 'ASAP1-IT1', 'SNCB', 'MMP20', 'LCN1', 'OR52K1', 'PRAMEF1', 'SPACA3', 'MUSK', 'PRDM9', 'SLITRK3', 'FOXN3-AS2', 'CCDC166', 'OR6K6', 'AADAC', 'KRTAP19-6', 'OR51G2', 'INSC', 'CCL24', 'UGT2B28', 'NKX2-1', 'OR2W1', 'DPRX', 'DPPA5', 'SNAR-F', 'MGC27382', 'CFHR4', 'NCAN', 'BRINP3', 'AWAT1', 'FOXD4L3', 'LOC285847', 'KRTAP2-1', 'CRLF2', 'DEFB123', 'BMP15', 'C1ORF94', 'IL17F', 'ENAM', 'TSKS', 'IQCF6', 'DPPA2', 'OR4C12', 'SPRR2E', 'DUSP21', 'LINC00923', 'APCS', 'KCNIP4-IT1', 'GRK1', 'OR51I2', 'PRSS54', 'MAGEA5', 'CRYGB', 'GAGE12F', 'ARL13A', 'OR56A1', 'MAP3K15', 'ASB11', 'DKFZP434K028', 'OR5H1', 'KRT25', 'NYX', 'CA6', 'NTS', 'C10ORF120', 'GCSAML-AS1', 'SLC10A1', 'SLC6A5', 'RPL3L', 'KRTAP10-6', 'IZUMO1R', 'MMP23A', 'MTNR1B', 'DAW1', 'BANF2', 'PROKR2', 'FAM74A3', 'NXNL1', 'TMPRSS12', 'OR6K2', 'PAPOLB', 'KRTAP10-3', 'OR12D2', 'AQP2', 'CD200R1L', 'FAM138B', 'OR6C2', 'LINC01312', 'LINC00410', 'IGLL3P', 'ADAM29', 'TFF2', 'NUTM1', 'SLURP1', 'KRTAP19-3', 'KRTAP5-4', 'AKR1C8P', 'TMEM88B', 'GOLGA6L1', 'OR4D5', 'KCNMB2', 'OTOL1', 'GRIN2B', 'YWHAEP7', 'ANP32D', 'OR1L1', 'TTTY15', 'SFTPB', 'NMUR2', 'IL3', 'OR51F2', 'YIPF7', 'USP9Y', 'CSN3', 'FAM71B', 'NEUROD1', 'OR2T10', 'OR2M3', 'OR10W1', 'ZNF705A', 'GPHA2', 'HBE1', 'SLC22A10', 'SNAR-G1', 'SNORA59B', 'PRB4', 'LRRC30', 'RBPJL', 'MAGEA9B', 'OR1B1', 'TARM1', 'AMER3', 'OR51B5', 'EDDM3B', 'TRIM48', 'GABRR3', 'IL36RN', 'URAD', 'RPS4Y2', 'KRTAP9-2', 'SDR16C6P', 'SLC9C1', 'SCTR', 'OCSTAMP', 'OR52R1', 'C16ORF90', 'PLA2G12B', 'NKX2-3', 'MUC2', 'SPANXN3', 'OR6A2', 'COX7B2', 'SYT14P1', 'OR7D4', 'SNORA76C', 'USH1C', 'TNP1', 'SPZ1', 'SNORD15B', 'AKR1D1', 'OR8I2', 'PSG4', 'BCYRN1', 'SHH', 'CCL15-CCL14', 'B4GALNT2', 'HULC', 'TBC1D21', 'OR13C9', 'FIGLA', 'ZNF679', 'OR5M3', 'PTH2', 'OR2L1P', 'TCEB3C', 'DEFB124', 'TRHDE', 'ANKRD34C', 'DEFB113', 'DMP1', 'GKN2', 'SNAR-I', 'CD300LD', 'DDI1', 'SNAR-E', 'GPR22', 'BPIFB4', 'CTRB2', 'CPA2', 'ADGRD2', 'KRTAP1-5', 'XKR7', 'OR10G8', 'BPIFB3', 'PPP1R2P9', 'SNORA36A', 'FKBP6', 'VIL1', 'SLC36A3', 'PCDH8', 'FAM41AY1', 'ACSM2B', 'AADACL3', 'SNORD97', 'NEUROD6', 'LINC00520', 'MAGEA1', 'CHRNB3', 'OR2AG1', 'OR4D2', 'C12ORF50', 'PRAC1', 'SH2D7', 'OACYLP', 'DISC2', 'NXPE1', 'USP50', 'BHLHE23', 'MYH7', 'CALCB', 'LOC284798', 'DEFB110', 'RAPGEF4-AS1', 'AIRE', 'KGFLP1', 'RFX6', 'CPNE4', 'CNGB1', 'CETN1', 'C2ORF27B', 'SSX9', 'SLC5A8', 'C11ORF40', 'LOC400736', 'SLCO1B7', 'TNFSF18', 'KRTAP1-1', 'KRT71', 'PRMT8', 'POU4F1', 'DMRT1', 'FAM183CP', 'KCNK4', 'ASB15', 'SCEL', 'GLYATL3', 'NEUROG3', 'CA5A', 'SNORA27', 'OR2L2', 'XIRP2', 'UGT2B10', 'FAM47C', 'NF1P2', 'DEFB118', 'TRIM75P', 'LINC00029', 'KCNJ16', 'CACNG7', 'HTR1A', 'DSCR10', 'MIR1-1HG', 'OR2A14', 'CD1B', 'OR8D4', 'GAGE2B', 'SPATA3', 'CIB4', 'HYMAI', 'ARL14', 'PRL', 'LOC100132831', 'FMO9P', 'HGC6.3', 'BTF3P11', 'OR52N1', 'SNORA16B', 'CDH10', 'HRK', 'KRTAP11-1', 'LINC00479', 'OR10H2', 'SNORA58', 'C12ORF42', 'LINC00202-2', 'C6ORF10', 'ODF3', 'GFI1B', 'OR1L4', 'OVCH1', 'HSD52', 'POU4F2', 'HIST1H3A', 'FAM19A1', 'HOXC12', 'OR52N2', 'NPB', 'ADRB3', 'HIST2H2AB', 'HIST1H3F', 'RAET1L', 'SNORA2B', 'HCRTR2', 'SPOCK3', 'SCARNA1', 'GPR52', 'SLC39A12', 'ANKRD20A20P', 'XAGE3', 'HTR2C', 'IFNL1', 'GSC2', 'DEFB109P1', 'CLRN1-AS1', 'SPINT3', 'HPVC1', 'HHATL', 'CYP2A7', 'SLC2A2', 'OR2A12', 'HIST1H2BM', 'RNF222', 'IGFBP1', 'NEUROG1', 'CA4', 'TPSD1', 'SERPINB11', 'NKX6-2', 'OR5H2', 'AATK-AS1', 'KRT12', 'KLRC4', 'LINC00314', 'FOXG1', 'GABBR2', 'SNORA72', 'MYH16', 'LOC647859', 'OR51T1', 'CRYGC', 'OR5M1', 'FOXE3', 'GBA3', 'LINC00710', 'CRISP2', 'EXD1', 'F2', 'TRPM3', 'CLCA3P', 'SLC13A1', 'LOC285627', 'CGB2', 'MROH5', 'LINC00452', 'LINC00964', 'PLD5', 'LINC00691', 'KRTAP12-1', 'OR51L1', 'LOC400940', 'OR4N4', 'MYL1', 'TMEM207', 'FAM170A', 'SCGB3A2', 'PTCHD3', 'NYAP2', 'OR51A2', 'C5ORF47', 'FAM92A1P2', 'IGLL1', 'FRMPD2', 'HBM', 'POU4F3', 'POU6F2', 'PRSS48', 'TSHB', 'LINC01105', 'OR10AD1', 'FOXI3', 'SNORA68', 'STON1-GTF2A1L', 'S100A12', 'B3GALT1', 'TKTL2', 'C12ORF56', 'C1ORF146', 'MEP1A', 'OR3A2', 'MT1B', 'CACNG3', 'LOC100130417', 'ALAS2', 'DPP10', 'MAGEA11', 'SLC22A12', 'INS-IGF2', 'PRAMEF14', 'ART1', 'OR13C2', 'SSX8', 'CLEC18C', 'ZIC5', 'OR5A1', 'GH2', 'GPRC6A', 'MYH4', 'OR5E1P', 'OR52K2', 'OR13H1', 'MAGEB4', 'PAQR9', 'HIST1H3B', 'LOC391343', 'C11ORF87', 'CCL7', 'CWH43', 'PDX1', 'VSTM5', 'NHLH2', 'SPANXN2', 'HMHB1', 'PCSK2', 'FGF16', 'FAM9B', 'SNORA64', 'PAEP', 'FAM71E2', 'FEZF1', 'PATE3', 'FRG2DP', 'DACH2', 'DAPL1', 'LOC100130264', 'LOC100129055', 'MYADML', 'FEZF2', 'MMP21', 'ABCA13', 'TBATA', 'SNORA16A', 'HIST1H4B', 'CYP1A2', 'BRDT', 'LINC00608', 'OTC', 'IFNE', 'CASR', 'MAGEA12', 'GABRA3', 'SLITRK1', 'GABRB1', 'OR52A1', 'KLK12', 'IFNL2', 'TAS2R42', 'SPRR1B', 'C4ORF51', 'GJA10', 'OR12D3', 'GJB7', 'GPR61', 'MYL2', 'TBX20', 'OR2T2', 'KAAG1', 'SPRR2G', 'VAX1', 'ISL1', 'C17ORF78', 'GCKR', 'RNF151', 'LINC00652', 'KRT18P55', 'PLCZ1', 'OR7A5', 'KRTAP10-4', 'OR9K2', 'ADCYAP1R1', 'S100A7', 'ZG16', 'KRTAP4-5', 'FOXR1', 'KRT73', 'CST13P', 'OPRM1', 'SPINK14', 'FSHR', 'OR5K1', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 0.9999999225074571 Coefficient of Determination: 1.0 RMSE: 9.651147556493863e-16 NRMSE: 6.217521376385159e-16 MAPE: 2.0979677179353918e-12 Pearson Correlation: -0.0594282582850566 Spearman Correlation: -0.031265242415374116 Coefficient of Determination: -2.500873815774247 RMSE: 0.3614663084433264 NRMSE: 0.24467539983844258 MAPE: 446.7941357579439 Predictor: ElasticNet Pearson Correlation: 0.7051113020008934 Spearman Correlation: 0.6107406838267727 Coefficient of Determination: 0.3876257520372429 RMSE: 0.1528498258813716 NRMSE: 0.09846985078522894 MAPE: 147.26436667806175 Pearson Correlation: 0.11868431455001989 Spearman Correlation: 0.15962345137059802 Coefficient of Determination: -0.005681503163609936 RMSE: 0.19373577585272156 NRMSE: 0.1311391333369806 MAPE: 129.2365537625844 Predictor: RandomForests Pearson Correlation: 0.6376341478447927 Spearman Correlation: 0.5805815536589014 Coefficient of Determination: 0.15451238649070598 RMSE: 0.1796015637015382 NRMSE: 0.11570401913450683 MAPE: 132.55715744839605 Pearson Correlation: 0.12019515059052378 Spearman Correlation: 0.17252950931616431 Coefficient of Determination: -0.0008233185329948878 RMSE: 0.1932672658933728 NRMSE: 0.13082200042872805 MAPE: 105.814255499235 Protein: CDKN2A x_train_column_count: 1030 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'OR8B3', 'LGALS14', 'OR52A4P', 'OR52B4', 'CT45A1', 'ARL5C', 'GYS2', 'SERPINI2', 'OR9A2', 'TMEM252', 'TMPRSS11F', 'TMPRSS11B', 'C10ORF53', 'TTTY2', 'MOGAT3', 'SNORA37', 'OR4F15', 'OR6S1', 'OR14C36', 'NXF2B', 'LINC00895', 'F13B', 'CGB5', 'LINC00469', 'HTR5A', 'HBG1', 'TCP10L2', 'IFNA16', 'OR10V1', 'FGA', 'PRSS1', 'ZNF479', 'MAGEB3', 'ZCCHC13', 'PPY', 'SNORA51', 'OR5H14', 'LINC00696', 'RAX2', 'WFDC5', 'OR4A16', 'GPR78', 'CLEC6A', 'ASB17', 'OR5T2', 'VWC2L', 'PSG7', 'ALPPL2', 'SST', 'PLG', 'ANKUB1', 'LINC00575', 'NOX3', 'SCARNA11', 'OR1S2', 'SNORA34', 'PLET1', 'LEUTX', 'LINC00523', 'RPL13AP17', 'OR1N1', 'LOC145845', 'ADAM18', 'TPD52L3', 'LINC01205', 'C18ORF42', 'POTED', 'ALOX12B', 'OR2G2', 'XAGE5', 'OR6M1', 'AMTN', 'OR2M2', 'HIST1H4F', 'C2ORF83', 'ARSF', 'SSX5', 'SFTA3', 'ARHGAP36', 'OR9G4', 'EPPIN', 'SLC1A6', 'ACTR3BP2', 'RESP18', 'OR11H4', 'OR4S1', 'ARR3', 'MBD3L5', 'OR2A2', 'LINC00488', 'CABS1', 'FMR1NB', 'TAAR9', 'PLSCR5', 'HNRNPCL1', 'SNORD89', 'TSGA13', 'ACTRT2', 'ZPBP', 'PROKR1', 'GH1', 'LINC01101', 'KRT13', 'BPIFA3', 'OPN1MW', 'OR4D9', 'SNORA70B', 'DEFB126', 'LINC00934', 'PROP1', 'SNORA1', 'FAM27B', 'OR8G5', 'CLCA4', 'ZIM3', 'PWAR4', 'CASC8', 'GABRG3', 'TRHR', 'CLRN2', 'ADGRG7', 'SPATA31C1', 'PRAMEF20', 'RGS8', 'RTP2', 'STATH', 'TCERG1L', 'ZAR1', 'COL6A4P1', 'MYBPHL', 'TMEM72', 'OR8G2', 'KRTAP25-1', 'OR2M4', 'CYP2W1', 'KRTAP19-8', 'SVOP', 'WFDC8', 'LINC00114', 'OR8H2', 'SLC38A8', 'OR2M7', 'SERPINB3', 'SLC32A1', 'LHX9', 'HYALP1', 'LINC00636', 'GYPB', 'NKAIN3', 'OR2T35', 'KRTAP6-1', 'HBD', 'KCNQ1DN', 'OR4C16', 'KRTAP19-2', 'DUXA', 'OR6Y1', 'IQCJ', 'LGI3', 'SPACA7', 'DAOA', 'OR7A17', 'FAM169B', 'OR2L8', 'HSFY2', 'SPANXA2', 'PPY2P', 'B3GNT6', 'DEFB104A', 'UGT2A3', 'OR6B3', 'TCP10', 'OR4K17', 'RHAG', 'SNORA38B', 'CTRB1', 'KRT3', 'INS', 'LINC00200', 'SPDYC', 'PRKAG3', 'OLIG1', 'KRTAP10-12', 'MYH1', 'LINC01566', 'FAM71C', 'LINC01565', 'PABPC1L2A', 'TRPV5', 'FDCSP', 'OR8J3', 'FTMT', 'INSM2', 'NEU2', 'TBC1D3P2', 'PPIAL4E', 'DYDC1', 'SFTPC', 'PRR27', 'MYF5', 'ACER1', 'DEFB129', 'HPD', 'IVL', 'C9ORF135', 'SNORD115-26', 'FBXW12', 'C3ORF30', 'IL13', 'MMD2', 'SLC51B', 'ITIH1', 'TEX13B', 'OR2AT4', 'HMX3', 'DNTT', 'CT47A1', 'OR6B2', 'KRTAP4-3', 'GSTA5', 'FAM27L', 'GPR148', 'OR1K1', 'LINC00602', 'AVPR1B', 'PRG1', 'C11ORF94', 'APOC3', 'LCN9', 'CYP2C18', 'SCARNA8', 'TAS2R60', 'KRTAP10-7', 'ZFAT-AS1', 'UCMA', 'SCN1A', 'LINC00113', 'FTHL17', 'HHLA1', 'LCE1D', 'PYDC2', 'OR11L1', 'GUCY2EP', 'CYLC2', 'KRTAP10-1', 'CSNK1A1P1', 'CCDC37', 'OR5M10', 'SPINK1', 'PSKH2', 'SULT1C3', 'CYP11B2', 'SNORD94', 'CYP7A1', 'CCK', 'SLC25A31', 'C20ORF173', 'OR5M8', 'LRRTM1', 'LOC729609', 'EPB42', 'TTTY8', 'TTTY9B', 'SLC17A6', 'EPGN', 'LYZL1', 'CGB8', 'SNORA77', 'CHIAP2', 'SPATA19', 'FAM138D', 'OLFM3', 'PCGEM1', 'UGT1A4', 'GBX2', 'SBSN', 'ACOT12', 'HBG2', 'CPLX3', 'REG4', 'PSG11', 'CNTNAP4', 'KRTAP21-1', 'SNORA47', 'KRTAP3-2', 'FFAR1', 'ABRA', 'TMEM202', 'HAO1', 'BOLL', 'ANGPTL3', 'ASAP1-IT1', 'SNCB', 'MMP20', 'LCN1', 'OR52K1', 'PRAMEF1', 'SPACA3', 'MUSK', 'PRDM9', 'SLITRK3', 'FOXN3-AS2', 'CCDC166', 'OR6K6', 'AADAC', 'KRTAP19-6', 'OR51G2', 'INSC', 'CCL24', 'UGT2B28', 'NKX2-1', 'OR2W1', 'DPRX', 'DPPA5', 'SNAR-F', 'MGC27382', 'CFHR4', 'NCAN', 'BRINP3', 'AWAT1', 'FOXD4L3', 'LOC285847', 'KRTAP2-1', 'CRLF2', 'DEFB123', 'BMP15', 'C1ORF94', 'IL17F', 'ENAM', 'TSKS', 'IQCF6', 'DPPA2', 'OR4C12', 'SPRR2E', 'DUSP21', 'LINC00923', 'APCS', 'KCNIP4-IT1', 'GRK1', 'OR51I2', 'PRSS54', 'MAGEA5', 'CRYGB', 'GAGE12F', 'ARL13A', 'OR56A1', 'MAP3K15', 'ASB11', 'DKFZP434K028', 'OR5H1', 'KRT25', 'NYX', 'CA6', 'NTS', 'C10ORF120', 'GCSAML-AS1', 'SLC10A1', 'SLC6A5', 'RPL3L', 'KRTAP10-6', 'IZUMO1R', 'MMP23A', 'MTNR1B', 'DAW1', 'BANF2', 'PROKR2', 'FAM74A3', 'NXNL1', 'TMPRSS12', 'OR6K2', 'PAPOLB', 'KRTAP10-3', 'OR12D2', 'AQP2', 'CD200R1L', 'FAM138B', 'OR6C2', 'LINC01312', 'LINC00410', 'IGLL3P', 'ADAM29', 'TFF2', 'NUTM1', 'SLURP1', 'KRTAP19-3', 'KRTAP5-4', 'AKR1C8P', 'TMEM88B', 'GOLGA6L1', 'OR4D5', 'KCNMB2', 'OTOL1', 'GRIN2B', 'YWHAEP7', 'ANP32D', 'OR1L1', 'TTTY15', 'SFTPB', 'NMUR2', 'IL3', 'OR51F2', 'YIPF7', 'USP9Y', 'CSN3', 'FAM71B', 'NEUROD1', 'OR2T10', 'OR2M3', 'OR10W1', 'ZNF705A', 'GPHA2', 'HBE1', 'SLC22A10', 'SNAR-G1', 'SNORA59B', 'PRB4', 'LRRC30', 'RBPJL', 'MAGEA9B', 'OR1B1', 'TARM1', 'AMER3', 'OR51B5', 'EDDM3B', 'TRIM48', 'GABRR3', 'IL36RN', 'URAD', 'RPS4Y2', 'KRTAP9-2', 'SDR16C6P', 'SLC9C1', 'SCTR', 'OCSTAMP', 'OR52R1', 'C16ORF90', 'PLA2G12B', 'NKX2-3', 'MUC2', 'SPANXN3', 'OR6A2', 'COX7B2', 'SYT14P1', 'OR7D4', 'SNORA76C', 'USH1C', 'TNP1', 'SPZ1', 'SNORD15B', 'AKR1D1', 'OR8I2', 'PSG4', 'BCYRN1', 'SHH', 'CCL15-CCL14', 'B4GALNT2', 'HULC', 'TBC1D21', 'OR13C9', 'FIGLA', 'ZNF679', 'OR5M3', 'PTH2', 'OR2L1P', 'TCEB3C', 'DEFB124', 'TRHDE', 'ANKRD34C', 'DEFB113', 'DMP1', 'GKN2', 'SNAR-I', 'CD300LD', 'DDI1', 'SNAR-E', 'GPR22', 'BPIFB4', 'CTRB2', 'CPA2', 'ADGRD2', 'KRTAP1-5', 'XKR7', 'OR10G8', 'BPIFB3', 'PPP1R2P9', 'SNORA36A', 'FKBP6', 'VIL1', 'SLC36A3', 'PCDH8', 'FAM41AY1', 'ACSM2B', 'AADACL3', 'SNORD97', 'NEUROD6', 'LINC00520', 'MAGEA1', 'CHRNB3', 'OR2AG1', 'OR4D2', 'C12ORF50', 'PRAC1', 'SH2D7', 'OACYLP', 'DISC2', 'NXPE1', 'USP50', 'BHLHE23', 'MYH7', 'CALCB', 'LOC284798', 'DEFB110', 'RAPGEF4-AS1', 'AIRE', 'KGFLP1', 'RFX6', 'CPNE4', 'CNGB1', 'CETN1', 'C2ORF27B', 'SSX9', 'SLC5A8', 'C11ORF40', 'LOC400736', 'SLCO1B7', 'TNFSF18', 'KRTAP1-1', 'KRT71', 'PRMT8', 'POU4F1', 'DMRT1', 'FAM183CP', 'KCNK4', 'ASB15', 'SCEL', 'GLYATL3', 'NEUROG3', 'CA5A', 'SNORA27', 'OR2L2', 'XIRP2', 'UGT2B10', 'FAM47C', 'NF1P2', 'DEFB118', 'TRIM75P', 'LINC00029', 'KCNJ16', 'CACNG7', 'HTR1A', 'DSCR10', 'MIR1-1HG', 'OR2A14', 'CD1B', 'OR8D4', 'GAGE2B', 'SPATA3', 'CIB4', 'HYMAI', 'ARL14', 'PRL', 'LOC100132831', 'FMO9P', 'HGC6.3', 'BTF3P11', 'OR52N1', 'SNORA16B', 'CDH10', 'HRK', 'KRTAP11-1', 'LINC00479', 'OR10H2', 'SNORA58', 'C12ORF42', 'LINC00202-2', 'C6ORF10', 'ODF3', 'GFI1B', 'OR1L4', 'OVCH1', 'HSD52', 'POU4F2', 'HIST1H3A', 'FAM19A1', 'HOXC12', 'OR52N2', 'NPB', 'ADRB3', 'HIST2H2AB', 'HIST1H3F', 'RAET1L', 'SNORA2B', 'HCRTR2', 'SPOCK3', 'SCARNA1', 'GPR52', 'SLC39A12', 'ANKRD20A20P', 'XAGE3', 'HTR2C', 'IFNL1', 'GSC2', 'DEFB109P1', 'CLRN1-AS1', 'SPINT3', 'HPVC1', 'HHATL', 'CYP2A7', 'SLC2A2', 'OR2A12', 'HIST1H2BM', 'RNF222', 'IGFBP1', 'NEUROG1', 'CA4', 'TPSD1', 'SERPINB11', 'NKX6-2', 'OR5H2', 'AATK-AS1', 'KRT12', 'KLRC4', 'LINC00314', 'FOXG1', 'GABBR2', 'SNORA72', 'MYH16', 'LOC647859', 'OR51T1', 'CRYGC', 'OR5M1', 'FOXE3', 'GBA3', 'LINC00710', 'CRISP2', 'EXD1', 'F2', 'TRPM3', 'CLCA3P', 'SLC13A1', 'LOC285627', 'CGB2', 'MROH5', 'LINC00452', 'LINC00964', 'PLD5', 'LINC00691', 'KRTAP12-1', 'OR51L1', 'LOC400940', 'OR4N4', 'MYL1', 'TMEM207', 'FAM170A', 'SCGB3A2', 'PTCHD3', 'NYAP2', 'OR51A2', 'C5ORF47', 'FAM92A1P2', 'IGLL1', 'FRMPD2', 'HBM', 'POU4F3', 'POU6F2', 'PRSS48', 'TSHB', 'LINC01105', 'OR10AD1', 'FOXI3', 'SNORA68', 'STON1-GTF2A1L', 'S100A12', 'B3GALT1', 'TKTL2', 'C12ORF56', 'C1ORF146', 'MEP1A', 'OR3A2', 'MT1B', 'CACNG3', 'LOC100130417', 'ALAS2', 'DPP10', 'MAGEA11', 'SLC22A12', 'INS-IGF2', 'PRAMEF14', 'ART1', 'OR13C2', 'SSX8', 'CLEC18C', 'ZIC5', 'OR5A1', 'GH2', 'GPRC6A', 'MYH4', 'OR5E1P', 'OR52K2', 'OR13H1', 'MAGEB4', 'PAQR9', 'HIST1H3B', 'LOC391343', 'C11ORF87', 'CCL7', 'CWH43', 'PDX1', 'VSTM5', 'NHLH2', 'SPANXN2', 'HMHB1', 'PCSK2', 'FGF16', 'FAM9B', 'SNORA64', 'PAEP', 'FAM71E2', 'FEZF1', 'PATE3', 'FRG2DP', 'DACH2', 'DAPL1', 'LOC100130264', 'LOC100129055', 'MYADML', 'FEZF2', 'MMP21', 'ABCA13', 'TBATA', 'SNORA16A', 'HIST1H4B', 'CYP1A2', 'BRDT', 'LINC00608', 'OTC', 'IFNE', 'CASR', 'MAGEA12', 'GABRA3', 'SLITRK1', 'GABRB1', 'OR52A1', 'KLK12', 'IFNL2', 'TAS2R42', 'SPRR1B', 'C4ORF51', 'GJA10', 'OR12D3', 'GJB7', 'GPR61', 'MYL2', 'TBX20', 'OR2T2', 'KAAG1', 'SPRR2G', 'VAX1', 'ISL1', 'C17ORF78', 'GCKR', 'RNF151', 'LINC00652', 'KRT18P55', 'PLCZ1', 'OR7A5', 'KRTAP10-4', 'OR9K2', 'ADCYAP1R1', 'S100A7', 'ZG16', 'KRTAP4-5', 'FOXR1', 'KRT73', 'CST13P', 'OPRM1', 'SPINK14', 'FSHR', 'OR5K1', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 2.7828955130223473e-15 NRMSE: 6.291162005250022e-16 MAPE: 2.1039854716929287e-12 Pearson Correlation: 0.25478640478121556 Spearman Correlation: 0.13074334211296462 Coefficient of Determination: -1.8793173794293918 RMSE: 1.1427170823256967 NRMSE: 0.3087089589166027 MAPE: 631.1525375772488 Predictor: ElasticNet Pearson Correlation: 0.8885032522187007 Spearman Correlation: 0.8708589149122613 Coefficient of Determination: 0.7574841110990198 RMSE: 0.3266702320330632 NRMSE: 0.07384881474693414 MAPE: 174.31467411716983 Pearson Correlation: 0.4847331564968874 Spearman Correlation: 0.37234903911813483 Coefficient of Determination: 0.22857598657674183 RMSE: 0.5914806305777092 NRMSE: 0.15979053127774723 MAPE: 194.8285598781517 Predictor: RandomForests Pearson Correlation: 0.6434308998680772 Spearman Correlation: 0.6022633363651655 Coefficient of Determination: 0.40235687526918273 RMSE: 0.512814653054418 NRMSE: 0.11592961524910544 MAPE: 185.33336916923162 Pearson Correlation: 0.6966591405407699 Spearman Correlation: 0.5866256950541411 Coefficient of Determination: 0.44555487860693566 RMSE: 0.5014449172151836 NRMSE: 0.13546707294553262 MAPE: 168.93356280693607 Protein: TP53 x_train_column_count: 1030 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'OR8B3', 'LGALS14', 'OR52A4P', 'OR52B4', 'CT45A1', 'ARL5C', 'GYS2', 'SERPINI2', 'OR9A2', 'TMEM252', 'TMPRSS11F', 'TMPRSS11B', 'C10ORF53', 'TTTY2', 'MOGAT3', 'SNORA37', 'OR4F15', 'OR6S1', 'OR14C36', 'NXF2B', 'LINC00895', 'F13B', 'CGB5', 'LINC00469', 'HTR5A', 'HBG1', 'TCP10L2', 'IFNA16', 'OR10V1', 'FGA', 'PRSS1', 'ZNF479', 'MAGEB3', 'ZCCHC13', 'PPY', 'SNORA51', 'OR5H14', 'LINC00696', 'RAX2', 'WFDC5', 'OR4A16', 'GPR78', 'CLEC6A', 'ASB17', 'OR5T2', 'VWC2L', 'PSG7', 'ALPPL2', 'SST', 'PLG', 'ANKUB1', 'LINC00575', 'NOX3', 'SCARNA11', 'OR1S2', 'SNORA34', 'PLET1', 'LEUTX', 'LINC00523', 'RPL13AP17', 'OR1N1', 'LOC145845', 'ADAM18', 'TPD52L3', 'LINC01205', 'C18ORF42', 'POTED', 'ALOX12B', 'OR2G2', 'XAGE5', 'OR6M1', 'AMTN', 'OR2M2', 'HIST1H4F', 'C2ORF83', 'ARSF', 'SSX5', 'SFTA3', 'ARHGAP36', 'OR9G4', 'EPPIN', 'SLC1A6', 'ACTR3BP2', 'RESP18', 'OR11H4', 'OR4S1', 'ARR3', 'MBD3L5', 'OR2A2', 'LINC00488', 'CABS1', 'FMR1NB', 'TAAR9', 'PLSCR5', 'HNRNPCL1', 'SNORD89', 'TSGA13', 'ACTRT2', 'ZPBP', 'PROKR1', 'GH1', 'LINC01101', 'KRT13', 'BPIFA3', 'OPN1MW', 'OR4D9', 'SNORA70B', 'DEFB126', 'LINC00934', 'PROP1', 'SNORA1', 'FAM27B', 'OR8G5', 'CLCA4', 'ZIM3', 'PWAR4', 'CASC8', 'GABRG3', 'TRHR', 'CLRN2', 'ADGRG7', 'SPATA31C1', 'PRAMEF20', 'RGS8', 'RTP2', 'STATH', 'TCERG1L', 'ZAR1', 'COL6A4P1', 'MYBPHL', 'TMEM72', 'OR8G2', 'KRTAP25-1', 'OR2M4', 'CYP2W1', 'KRTAP19-8', 'SVOP', 'WFDC8', 'LINC00114', 'OR8H2', 'SLC38A8', 'OR2M7', 'SERPINB3', 'SLC32A1', 'LHX9', 'HYALP1', 'LINC00636', 'GYPB', 'NKAIN3', 'OR2T35', 'KRTAP6-1', 'HBD', 'KCNQ1DN', 'OR4C16', 'KRTAP19-2', 'DUXA', 'OR6Y1', 'IQCJ', 'LGI3', 'SPACA7', 'DAOA', 'OR7A17', 'FAM169B', 'OR2L8', 'HSFY2', 'SPANXA2', 'PPY2P', 'B3GNT6', 'DEFB104A', 'UGT2A3', 'OR6B3', 'TCP10', 'OR4K17', 'RHAG', 'SNORA38B', 'CTRB1', 'KRT3', 'INS', 'LINC00200', 'SPDYC', 'PRKAG3', 'OLIG1', 'KRTAP10-12', 'MYH1', 'LINC01566', 'FAM71C', 'LINC01565', 'PABPC1L2A', 'TRPV5', 'FDCSP', 'OR8J3', 'FTMT', 'INSM2', 'NEU2', 'TBC1D3P2', 'PPIAL4E', 'DYDC1', 'SFTPC', 'PRR27', 'MYF5', 'ACER1', 'DEFB129', 'HPD', 'IVL', 'C9ORF135', 'SNORD115-26', 'FBXW12', 'C3ORF30', 'IL13', 'MMD2', 'SLC51B', 'ITIH1', 'TEX13B', 'OR2AT4', 'HMX3', 'DNTT', 'CT47A1', 'OR6B2', 'KRTAP4-3', 'GSTA5', 'FAM27L', 'GPR148', 'OR1K1', 'LINC00602', 'AVPR1B', 'PRG1', 'C11ORF94', 'APOC3', 'LCN9', 'CYP2C18', 'SCARNA8', 'TAS2R60', 'KRTAP10-7', 'ZFAT-AS1', 'UCMA', 'SCN1A', 'LINC00113', 'FTHL17', 'HHLA1', 'LCE1D', 'PYDC2', 'OR11L1', 'GUCY2EP', 'CYLC2', 'KRTAP10-1', 'CSNK1A1P1', 'CCDC37', 'OR5M10', 'SPINK1', 'PSKH2', 'SULT1C3', 'CYP11B2', 'SNORD94', 'CYP7A1', 'CCK', 'SLC25A31', 'C20ORF173', 'OR5M8', 'LRRTM1', 'LOC729609', 'EPB42', 'TTTY8', 'TTTY9B', 'SLC17A6', 'EPGN', 'LYZL1', 'CGB8', 'SNORA77', 'CHIAP2', 'SPATA19', 'FAM138D', 'OLFM3', 'PCGEM1', 'UGT1A4', 'GBX2', 'SBSN', 'ACOT12', 'HBG2', 'CPLX3', 'REG4', 'PSG11', 'CNTNAP4', 'KRTAP21-1', 'SNORA47', 'KRTAP3-2', 'FFAR1', 'ABRA', 'TMEM202', 'HAO1', 'BOLL', 'ANGPTL3', 'ASAP1-IT1', 'SNCB', 'MMP20', 'LCN1', 'OR52K1', 'PRAMEF1', 'SPACA3', 'MUSK', 'PRDM9', 'SLITRK3', 'FOXN3-AS2', 'CCDC166', 'OR6K6', 'AADAC', 'KRTAP19-6', 'OR51G2', 'INSC', 'CCL24', 'UGT2B28', 'NKX2-1', 'OR2W1', 'DPRX', 'DPPA5', 'SNAR-F', 'MGC27382', 'CFHR4', 'NCAN', 'BRINP3', 'AWAT1', 'FOXD4L3', 'LOC285847', 'KRTAP2-1', 'CRLF2', 'DEFB123', 'BMP15', 'C1ORF94', 'IL17F', 'ENAM', 'TSKS', 'IQCF6', 'DPPA2', 'OR4C12', 'SPRR2E', 'DUSP21', 'LINC00923', 'APCS', 'KCNIP4-IT1', 'GRK1', 'OR51I2', 'PRSS54', 'MAGEA5', 'CRYGB', 'GAGE12F', 'ARL13A', 'OR56A1', 'MAP3K15', 'ASB11', 'DKFZP434K028', 'OR5H1', 'KRT25', 'NYX', 'CA6', 'NTS', 'C10ORF120', 'GCSAML-AS1', 'SLC10A1', 'SLC6A5', 'RPL3L', 'KRTAP10-6', 'IZUMO1R', 'MMP23A', 'MTNR1B', 'DAW1', 'BANF2', 'PROKR2', 'FAM74A3', 'NXNL1', 'TMPRSS12', 'OR6K2', 'PAPOLB', 'KRTAP10-3', 'OR12D2', 'AQP2', 'CD200R1L', 'FAM138B', 'OR6C2', 'LINC01312', 'LINC00410', 'IGLL3P', 'ADAM29', 'TFF2', 'NUTM1', 'SLURP1', 'KRTAP19-3', 'KRTAP5-4', 'AKR1C8P', 'TMEM88B', 'GOLGA6L1', 'OR4D5', 'KCNMB2', 'OTOL1', 'GRIN2B', 'YWHAEP7', 'ANP32D', 'OR1L1', 'TTTY15', 'SFTPB', 'NMUR2', 'IL3', 'OR51F2', 'YIPF7', 'USP9Y', 'CSN3', 'FAM71B', 'NEUROD1', 'OR2T10', 'OR2M3', 'OR10W1', 'ZNF705A', 'GPHA2', 'HBE1', 'SLC22A10', 'SNAR-G1', 'SNORA59B', 'PRB4', 'LRRC30', 'RBPJL', 'MAGEA9B', 'OR1B1', 'TARM1', 'AMER3', 'OR51B5', 'EDDM3B', 'TRIM48', 'GABRR3', 'IL36RN', 'URAD', 'RPS4Y2', 'KRTAP9-2', 'SDR16C6P', 'SLC9C1', 'SCTR', 'OCSTAMP', 'OR52R1', 'C16ORF90', 'PLA2G12B', 'NKX2-3', 'MUC2', 'SPANXN3', 'OR6A2', 'COX7B2', 'SYT14P1', 'OR7D4', 'SNORA76C', 'USH1C', 'TNP1', 'SPZ1', 'SNORD15B', 'AKR1D1', 'OR8I2', 'PSG4', 'BCYRN1', 'SHH', 'CCL15-CCL14', 'B4GALNT2', 'HULC', 'TBC1D21', 'OR13C9', 'FIGLA', 'ZNF679', 'OR5M3', 'PTH2', 'OR2L1P', 'TCEB3C', 'DEFB124', 'TRHDE', 'ANKRD34C', 'DEFB113', 'DMP1', 'GKN2', 'SNAR-I', 'CD300LD', 'DDI1', 'SNAR-E', 'GPR22', 'BPIFB4', 'CTRB2', 'CPA2', 'ADGRD2', 'KRTAP1-5', 'XKR7', 'OR10G8', 'BPIFB3', 'PPP1R2P9', 'SNORA36A', 'FKBP6', 'VIL1', 'SLC36A3', 'PCDH8', 'FAM41AY1', 'ACSM2B', 'AADACL3', 'SNORD97', 'NEUROD6', 'LINC00520', 'MAGEA1', 'CHRNB3', 'OR2AG1', 'OR4D2', 'C12ORF50', 'PRAC1', 'SH2D7', 'OACYLP', 'DISC2', 'NXPE1', 'USP50', 'BHLHE23', 'MYH7', 'CALCB', 'LOC284798', 'DEFB110', 'RAPGEF4-AS1', 'AIRE', 'KGFLP1', 'RFX6', 'CPNE4', 'CNGB1', 'CETN1', 'C2ORF27B', 'SSX9', 'SLC5A8', 'C11ORF40', 'LOC400736', 'SLCO1B7', 'TNFSF18', 'KRTAP1-1', 'KRT71', 'PRMT8', 'POU4F1', 'DMRT1', 'FAM183CP', 'KCNK4', 'ASB15', 'SCEL', 'GLYATL3', 'NEUROG3', 'CA5A', 'SNORA27', 'OR2L2', 'XIRP2', 'UGT2B10', 'FAM47C', 'NF1P2', 'DEFB118', 'TRIM75P', 'LINC00029', 'KCNJ16', 'CACNG7', 'HTR1A', 'DSCR10', 'MIR1-1HG', 'OR2A14', 'CD1B', 'OR8D4', 'GAGE2B', 'SPATA3', 'CIB4', 'HYMAI', 'ARL14', 'PRL', 'LOC100132831', 'FMO9P', 'HGC6.3', 'BTF3P11', 'OR52N1', 'SNORA16B', 'CDH10', 'HRK', 'KRTAP11-1', 'LINC00479', 'OR10H2', 'SNORA58', 'C12ORF42', 'LINC00202-2', 'C6ORF10', 'ODF3', 'GFI1B', 'OR1L4', 'OVCH1', 'HSD52', 'POU4F2', 'HIST1H3A', 'FAM19A1', 'HOXC12', 'OR52N2', 'NPB', 'ADRB3', 'HIST2H2AB', 'HIST1H3F', 'RAET1L', 'SNORA2B', 'HCRTR2', 'SPOCK3', 'SCARNA1', 'GPR52', 'SLC39A12', 'ANKRD20A20P', 'XAGE3', 'HTR2C', 'IFNL1', 'GSC2', 'DEFB109P1', 'CLRN1-AS1', 'SPINT3', 'HPVC1', 'HHATL', 'CYP2A7', 'SLC2A2', 'OR2A12', 'HIST1H2BM', 'RNF222', 'IGFBP1', 'NEUROG1', 'CA4', 'TPSD1', 'SERPINB11', 'NKX6-2', 'OR5H2', 'AATK-AS1', 'KRT12', 'KLRC4', 'LINC00314', 'FOXG1', 'GABBR2', 'SNORA72', 'MYH16', 'LOC647859', 'OR51T1', 'CRYGC', 'OR5M1', 'FOXE3', 'GBA3', 'LINC00710', 'CRISP2', 'EXD1', 'F2', 'TRPM3', 'CLCA3P', 'SLC13A1', 'LOC285627', 'CGB2', 'MROH5', 'LINC00452', 'LINC00964', 'PLD5', 'LINC00691', 'KRTAP12-1', 'OR51L1', 'LOC400940', 'OR4N4', 'MYL1', 'TMEM207', 'FAM170A', 'SCGB3A2', 'PTCHD3', 'NYAP2', 'OR51A2', 'C5ORF47', 'FAM92A1P2', 'IGLL1', 'FRMPD2', 'HBM', 'POU4F3', 'POU6F2', 'PRSS48', 'TSHB', 'LINC01105', 'OR10AD1', 'FOXI3', 'SNORA68', 'STON1-GTF2A1L', 'S100A12', 'B3GALT1', 'TKTL2', 'C12ORF56', 'C1ORF146', 'MEP1A', 'OR3A2', 'MT1B', 'CACNG3', 'LOC100130417', 'ALAS2', 'DPP10', 'MAGEA11', 'SLC22A12', 'INS-IGF2', 'PRAMEF14', 'ART1', 'OR13C2', 'SSX8', 'CLEC18C', 'ZIC5', 'OR5A1', 'GH2', 'GPRC6A', 'MYH4', 'OR5E1P', 'OR52K2', 'OR13H1', 'MAGEB4', 'PAQR9', 'HIST1H3B', 'LOC391343', 'C11ORF87', 'CCL7', 'CWH43', 'PDX1', 'VSTM5', 'NHLH2', 'SPANXN2', 'HMHB1', 'PCSK2', 'FGF16', 'FAM9B', 'SNORA64', 'PAEP', 'FAM71E2', 'FEZF1', 'PATE3', 'FRG2DP', 'DACH2', 'DAPL1', 'LOC100130264', 'LOC100129055', 'MYADML', 'FEZF2', 'MMP21', 'ABCA13', 'TBATA', 'SNORA16A', 'HIST1H4B', 'CYP1A2', 'BRDT', 'LINC00608', 'OTC', 'IFNE', 'CASR', 'MAGEA12', 'GABRA3', 'SLITRK1', 'GABRB1', 'OR52A1', 'KLK12', 'IFNL2', 'TAS2R42', 'SPRR1B', 'C4ORF51', 'GJA10', 'OR12D3', 'GJB7', 'GPR61', 'MYL2', 'TBX20', 'OR2T2', 'KAAG1', 'SPRR2G', 'VAX1', 'ISL1', 'C17ORF78', 'GCKR', 'RNF151', 'LINC00652', 'KRT18P55', 'PLCZ1', 'OR7A5', 'KRTAP10-4', 'OR9K2', 'ADCYAP1R1', 'S100A7', 'ZG16', 'KRTAP4-5', 'FOXR1', 'KRT73', 'CST13P', 'OPRM1', 'SPINK14', 'FSHR', 'OR5K1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.2113727840799722e-15 NRMSE: 5.92305553523496e-16 MAPE: 4.286600922469506e-12 Pearson Correlation: 0.1220297046308328 Spearman Correlation: 0.0929470295580919 Coefficient of Determination: -1.767776533121534 RMSE: 0.681076398022761 NRMSE: 0.22429652495398023 MAPE: 2695.5155340641886 Predictor: ElasticNet Pearson Correlation: 0.8654674762031456 Spearman Correlation: 0.782478455959565 Coefficient of Determination: 0.7073442064952036 RMSE: 0.24631876501639177 NRMSE: 0.06597529530370745 MAPE: 273.9432099369972 Pearson Correlation: 0.3662422251325018 Spearman Correlation: 0.3710174617110526 Coefficient of Determination: 0.11711748115707166 RMSE: 0.38466420784866256 NRMSE: 0.12668012772885312 MAPE: 1283.408940098084 Predictor: RandomForests Pearson Correlation: 0.656465670053954 Spearman Correlation: 0.5715890637512641 Coefficient of Determination: 0.38357927822314053 RMSE: 0.35748477502883214 NRMSE: 0.09575057587487135 MAPE: 320.46611313542314 Pearson Correlation: 0.5546068006651379 Spearman Correlation: 0.4503881395568437 Coefficient of Determination: 0.29498062776699374 RMSE: 0.34374061084078367 NRMSE: 0.11320290164359745 MAPE: 1520.1230943249782 Protein: CTNNB1 x_train_column_count: 1030 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'OR8B3', 'LGALS14', 'OR52A4P', 'OR52B4', 'CT45A1', 'ARL5C', 'GYS2', 'SERPINI2', 'OR9A2', 'TMEM252', 'TMPRSS11F', 'TMPRSS11B', 'C10ORF53', 'TTTY2', 'MOGAT3', 'SNORA37', 'OR4F15', 'OR6S1', 'OR14C36', 'NXF2B', 'LINC00895', 'F13B', 'CGB5', 'LINC00469', 'HTR5A', 'HBG1', 'TCP10L2', 'IFNA16', 'OR10V1', 'FGA', 'PRSS1', 'ZNF479', 'MAGEB3', 'ZCCHC13', 'PPY', 'SNORA51', 'OR5H14', 'LINC00696', 'RAX2', 'WFDC5', 'OR4A16', 'GPR78', 'CLEC6A', 'ASB17', 'OR5T2', 'VWC2L', 'PSG7', 'ALPPL2', 'SST', 'PLG', 'ANKUB1', 'LINC00575', 'NOX3', 'SCARNA11', 'OR1S2', 'SNORA34', 'PLET1', 'LEUTX', 'LINC00523', 'RPL13AP17', 'OR1N1', 'LOC145845', 'ADAM18', 'TPD52L3', 'LINC01205', 'C18ORF42', 'POTED', 'ALOX12B', 'OR2G2', 'XAGE5', 'OR6M1', 'AMTN', 'OR2M2', 'HIST1H4F', 'C2ORF83', 'ARSF', 'SSX5', 'SFTA3', 'ARHGAP36', 'OR9G4', 'EPPIN', 'SLC1A6', 'ACTR3BP2', 'RESP18', 'OR11H4', 'OR4S1', 'ARR3', 'MBD3L5', 'OR2A2', 'LINC00488', 'CABS1', 'FMR1NB', 'TAAR9', 'PLSCR5', 'HNRNPCL1', 'SNORD89', 'TSGA13', 'ACTRT2', 'ZPBP', 'PROKR1', 'GH1', 'LINC01101', 'KRT13', 'BPIFA3', 'OPN1MW', 'OR4D9', 'SNORA70B', 'DEFB126', 'LINC00934', 'PROP1', 'SNORA1', 'FAM27B', 'OR8G5', 'CLCA4', 'ZIM3', 'PWAR4', 'CASC8', 'GABRG3', 'TRHR', 'CLRN2', 'ADGRG7', 'SPATA31C1', 'PRAMEF20', 'RGS8', 'RTP2', 'STATH', 'TCERG1L', 'ZAR1', 'COL6A4P1', 'MYBPHL', 'TMEM72', 'OR8G2', 'KRTAP25-1', 'OR2M4', 'CYP2W1', 'KRTAP19-8', 'SVOP', 'WFDC8', 'LINC00114', 'OR8H2', 'SLC38A8', 'OR2M7', 'SERPINB3', 'SLC32A1', 'LHX9', 'HYALP1', 'LINC00636', 'GYPB', 'NKAIN3', 'OR2T35', 'KRTAP6-1', 'HBD', 'KCNQ1DN', 'OR4C16', 'KRTAP19-2', 'DUXA', 'OR6Y1', 'IQCJ', 'LGI3', 'SPACA7', 'DAOA', 'OR7A17', 'FAM169B', 'OR2L8', 'HSFY2', 'SPANXA2', 'PPY2P', 'B3GNT6', 'DEFB104A', 'UGT2A3', 'OR6B3', 'TCP10', 'OR4K17', 'RHAG', 'SNORA38B', 'CTRB1', 'KRT3', 'INS', 'LINC00200', 'SPDYC', 'PRKAG3', 'OLIG1', 'KRTAP10-12', 'MYH1', 'LINC01566', 'FAM71C', 'LINC01565', 'PABPC1L2A', 'TRPV5', 'FDCSP', 'OR8J3', 'FTMT', 'INSM2', 'NEU2', 'TBC1D3P2', 'PPIAL4E', 'DYDC1', 'SFTPC', 'PRR27', 'MYF5', 'ACER1', 'DEFB129', 'HPD', 'IVL', 'C9ORF135', 'SNORD115-26', 'FBXW12', 'C3ORF30', 'IL13', 'MMD2', 'SLC51B', 'ITIH1', 'TEX13B', 'OR2AT4', 'HMX3', 'DNTT', 'CT47A1', 'OR6B2', 'KRTAP4-3', 'GSTA5', 'FAM27L', 'GPR148', 'OR1K1', 'LINC00602', 'AVPR1B', 'PRG1', 'C11ORF94', 'APOC3', 'LCN9', 'CYP2C18', 'SCARNA8', 'TAS2R60', 'KRTAP10-7', 'ZFAT-AS1', 'UCMA', 'SCN1A', 'LINC00113', 'FTHL17', 'HHLA1', 'LCE1D', 'PYDC2', 'OR11L1', 'GUCY2EP', 'CYLC2', 'KRTAP10-1', 'CSNK1A1P1', 'CCDC37', 'OR5M10', 'SPINK1', 'PSKH2', 'SULT1C3', 'CYP11B2', 'SNORD94', 'CYP7A1', 'CCK', 'SLC25A31', 'C20ORF173', 'OR5M8', 'LRRTM1', 'LOC729609', 'EPB42', 'TTTY8', 'TTTY9B', 'SLC17A6', 'EPGN', 'LYZL1', 'CGB8', 'SNORA77', 'CHIAP2', 'SPATA19', 'FAM138D', 'OLFM3', 'PCGEM1', 'UGT1A4', 'GBX2', 'SBSN', 'ACOT12', 'HBG2', 'CPLX3', 'REG4', 'PSG11', 'CNTNAP4', 'KRTAP21-1', 'SNORA47', 'KRTAP3-2', 'FFAR1', 'ABRA', 'TMEM202', 'HAO1', 'BOLL', 'ANGPTL3', 'ASAP1-IT1', 'SNCB', 'MMP20', 'LCN1', 'OR52K1', 'PRAMEF1', 'SPACA3', 'MUSK', 'PRDM9', 'SLITRK3', 'FOXN3-AS2', 'CCDC166', 'OR6K6', 'AADAC', 'KRTAP19-6', 'OR51G2', 'INSC', 'CCL24', 'UGT2B28', 'NKX2-1', 'OR2W1', 'DPRX', 'DPPA5', 'SNAR-F', 'MGC27382', 'CFHR4', 'NCAN', 'BRINP3', 'AWAT1', 'FOXD4L3', 'LOC285847', 'KRTAP2-1', 'CRLF2', 'DEFB123', 'BMP15', 'C1ORF94', 'IL17F', 'ENAM', 'TSKS', 'IQCF6', 'DPPA2', 'OR4C12', 'SPRR2E', 'DUSP21', 'LINC00923', 'APCS', 'KCNIP4-IT1', 'GRK1', 'OR51I2', 'PRSS54', 'MAGEA5', 'CRYGB', 'GAGE12F', 'ARL13A', 'OR56A1', 'MAP3K15', 'ASB11', 'DKFZP434K028', 'OR5H1', 'KRT25', 'NYX', 'CA6', 'NTS', 'C10ORF120', 'GCSAML-AS1', 'SLC10A1', 'SLC6A5', 'RPL3L', 'KRTAP10-6', 'IZUMO1R', 'MMP23A', 'MTNR1B', 'DAW1', 'BANF2', 'PROKR2', 'FAM74A3', 'NXNL1', 'TMPRSS12', 'OR6K2', 'PAPOLB', 'KRTAP10-3', 'OR12D2', 'AQP2', 'CD200R1L', 'FAM138B', 'OR6C2', 'LINC01312', 'LINC00410', 'IGLL3P', 'ADAM29', 'TFF2', 'NUTM1', 'SLURP1', 'KRTAP19-3', 'KRTAP5-4', 'AKR1C8P', 'TMEM88B', 'GOLGA6L1', 'OR4D5', 'KCNMB2', 'OTOL1', 'GRIN2B', 'YWHAEP7', 'ANP32D', 'OR1L1', 'TTTY15', 'SFTPB', 'NMUR2', 'IL3', 'OR51F2', 'YIPF7', 'USP9Y', 'CSN3', 'FAM71B', 'NEUROD1', 'OR2T10', 'OR2M3', 'OR10W1', 'ZNF705A', 'GPHA2', 'HBE1', 'SLC22A10', 'SNAR-G1', 'SNORA59B', 'PRB4', 'LRRC30', 'RBPJL', 'MAGEA9B', 'OR1B1', 'TARM1', 'AMER3', 'OR51B5', 'EDDM3B', 'TRIM48', 'GABRR3', 'IL36RN', 'URAD', 'RPS4Y2', 'KRTAP9-2', 'SDR16C6P', 'SLC9C1', 'SCTR', 'OCSTAMP', 'OR52R1', 'C16ORF90', 'PLA2G12B', 'NKX2-3', 'MUC2', 'SPANXN3', 'OR6A2', 'COX7B2', 'SYT14P1', 'OR7D4', 'SNORA76C', 'USH1C', 'TNP1', 'SPZ1', 'SNORD15B', 'AKR1D1', 'OR8I2', 'PSG4', 'BCYRN1', 'SHH', 'CCL15-CCL14', 'B4GALNT2', 'HULC', 'TBC1D21', 'OR13C9', 'FIGLA', 'ZNF679', 'OR5M3', 'PTH2', 'OR2L1P', 'TCEB3C', 'DEFB124', 'TRHDE', 'ANKRD34C', 'DEFB113', 'DMP1', 'GKN2', 'SNAR-I', 'CD300LD', 'DDI1', 'SNAR-E', 'GPR22', 'BPIFB4', 'CTRB2', 'CPA2', 'ADGRD2', 'KRTAP1-5', 'XKR7', 'OR10G8', 'BPIFB3', 'PPP1R2P9', 'SNORA36A', 'FKBP6', 'VIL1', 'SLC36A3', 'PCDH8', 'FAM41AY1', 'ACSM2B', 'AADACL3', 'SNORD97', 'NEUROD6', 'LINC00520', 'MAGEA1', 'CHRNB3', 'OR2AG1', 'OR4D2', 'C12ORF50', 'PRAC1', 'SH2D7', 'OACYLP', 'DISC2', 'NXPE1', 'USP50', 'BHLHE23', 'MYH7', 'CALCB', 'LOC284798', 'DEFB110', 'RAPGEF4-AS1', 'AIRE', 'KGFLP1', 'RFX6', 'CPNE4', 'CNGB1', 'CETN1', 'C2ORF27B', 'SSX9', 'SLC5A8', 'C11ORF40', 'LOC400736', 'SLCO1B7', 'TNFSF18', 'KRTAP1-1', 'KRT71', 'PRMT8', 'POU4F1', 'DMRT1', 'FAM183CP', 'KCNK4', 'ASB15', 'SCEL', 'GLYATL3', 'NEUROG3', 'CA5A', 'SNORA27', 'OR2L2', 'XIRP2', 'UGT2B10', 'FAM47C', 'NF1P2', 'DEFB118', 'TRIM75P', 'LINC00029', 'KCNJ16', 'CACNG7', 'HTR1A', 'DSCR10', 'MIR1-1HG', 'OR2A14', 'CD1B', 'OR8D4', 'GAGE2B', 'SPATA3', 'CIB4', 'HYMAI', 'ARL14', 'PRL', 'LOC100132831', 'FMO9P', 'HGC6.3', 'BTF3P11', 'OR52N1', 'SNORA16B', 'CDH10', 'HRK', 'KRTAP11-1', 'LINC00479', 'OR10H2', 'SNORA58', 'C12ORF42', 'LINC00202-2', 'C6ORF10', 'ODF3', 'GFI1B', 'OR1L4', 'OVCH1', 'HSD52', 'POU4F2', 'HIST1H3A', 'FAM19A1', 'HOXC12', 'OR52N2', 'NPB', 'ADRB3', 'HIST2H2AB', 'HIST1H3F', 'RAET1L', 'SNORA2B', 'HCRTR2', 'SPOCK3', 'SCARNA1', 'GPR52', 'SLC39A12', 'ANKRD20A20P', 'XAGE3', 'HTR2C', 'IFNL1', 'GSC2', 'DEFB109P1', 'CLRN1-AS1', 'SPINT3', 'HPVC1', 'HHATL', 'CYP2A7', 'SLC2A2', 'OR2A12', 'HIST1H2BM', 'RNF222', 'IGFBP1', 'NEUROG1', 'CA4', 'TPSD1', 'SERPINB11', 'NKX6-2', 'OR5H2', 'AATK-AS1', 'KRT12', 'KLRC4', 'LINC00314', 'FOXG1', 'GABBR2', 'SNORA72', 'MYH16', 'LOC647859', 'OR51T1', 'CRYGC', 'OR5M1', 'FOXE3', 'GBA3', 'LINC00710', 'CRISP2', 'EXD1', 'F2', 'TRPM3', 'CLCA3P', 'SLC13A1', 'LOC285627', 'CGB2', 'MROH5', 'LINC00452', 'LINC00964', 'PLD5', 'LINC00691', 'KRTAP12-1', 'OR51L1', 'LOC400940', 'OR4N4', 'MYL1', 'TMEM207', 'FAM170A', 'SCGB3A2', 'PTCHD3', 'NYAP2', 'OR51A2', 'C5ORF47', 'FAM92A1P2', 'IGLL1', 'FRMPD2', 'HBM', 'POU4F3', 'POU6F2', 'PRSS48', 'TSHB', 'LINC01105', 'OR10AD1', 'FOXI3', 'SNORA68', 'STON1-GTF2A1L', 'S100A12', 'B3GALT1', 'TKTL2', 'C12ORF56', 'C1ORF146', 'MEP1A', 'OR3A2', 'MT1B', 'CACNG3', 'LOC100130417', 'ALAS2', 'DPP10', 'MAGEA11', 'SLC22A12', 'INS-IGF2', 'PRAMEF14', 'ART1', 'OR13C2', 'SSX8', 'CLEC18C', 'ZIC5', 'OR5A1', 'GH2', 'GPRC6A', 'MYH4', 'OR5E1P', 'OR52K2', 'OR13H1', 'MAGEB4', 'PAQR9', 'HIST1H3B', 'LOC391343', 'C11ORF87', 'CCL7', 'CWH43', 'PDX1', 'VSTM5', 'NHLH2', 'SPANXN2', 'HMHB1', 'PCSK2', 'FGF16', 'FAM9B', 'SNORA64', 'PAEP', 'FAM71E2', 'FEZF1', 'PATE3', 'FRG2DP', 'DACH2', 'DAPL1', 'LOC100130264', 'LOC100129055', 'MYADML', 'FEZF2', 'MMP21', 'ABCA13', 'TBATA', 'SNORA16A', 'HIST1H4B', 'CYP1A2', 'BRDT', 'LINC00608', 'OTC', 'IFNE', 'CASR', 'MAGEA12', 'GABRA3', 'SLITRK1', 'GABRB1', 'OR52A1', 'KLK12', 'IFNL2', 'TAS2R42', 'SPRR1B', 'C4ORF51', 'GJA10', 'OR12D3', 'GJB7', 'GPR61', 'MYL2', 'TBX20', 'OR2T2', 'KAAG1', 'SPRR2G', 'VAX1', 'ISL1', 'C17ORF78', 'GCKR', 'RNF151', 'LINC00652', 'KRT18P55', 'PLCZ1', 'OR7A5', 'KRTAP10-4', 'OR9K2', 'ADCYAP1R1', 'S100A7', 'ZG16', 'KRTAP4-5', 'FOXR1', 'KRT73', 'CST13P', 'OPRM1', 'SPINK14', 'FSHR', 'OR5K1', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 3.4235060496299002e-15 NRMSE: 6.733882867092645e-16 MAPE: 3.652142331381804e-12 Pearson Correlation: 0.11212831971326614 Spearman Correlation: 0.12759730757974833 Coefficient of Determination: -1.8212868282240136 RMSE: 1.2875234749611322 NRMSE: 0.3204309188325657 MAPE: 426.1211904680549 Predictor: ElasticNet Pearson Correlation: 0.8757022315895961 Spearman Correlation: 0.8774492027169907 Coefficient of Determination: 0.7243120044580299 RMSE: 0.3806598765251608 NRMSE: 0.07487409058323384 MAPE: 257.5251940364497 Pearson Correlation: 0.24875024508811946 Spearman Correlation: 0.331045751633987 Coefficient of Determination: -0.03503525817793851 RMSE: 0.7798464644738937 NRMSE: 0.19408338878422485 MAPE: 225.59969008713273 Predictor: RandomForests Pearson Correlation: 0.5972590525658618 Spearman Correlation: 0.5538335183887589 Coefficient of Determination: 0.20898274764799762 RMSE: 0.6447942446680092 NRMSE: 0.12682813624469103 MAPE: 510.22488960743874 Pearson Correlation: 0.37204848188453643 Spearman Correlation: 0.3828650863330407 Coefficient of Determination: -0.017462050768773052 RMSE: 0.773197863728417 NRMSE: 0.19242872594719324 MAPE: 242.36904765127494 Protein: CCNE1 x_train_column_count: 1030 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'OR8B3', 'LGALS14', 'OR52A4P', 'OR52B4', 'CT45A1', 'ARL5C', 'GYS2', 'SERPINI2', 'OR9A2', 'TMEM252', 'TMPRSS11F', 'TMPRSS11B', 'C10ORF53', 'TTTY2', 'MOGAT3', 'SNORA37', 'OR4F15', 'OR6S1', 'OR14C36', 'NXF2B', 'LINC00895', 'F13B', 'CGB5', 'LINC00469', 'HTR5A', 'HBG1', 'TCP10L2', 'IFNA16', 'OR10V1', 'FGA', 'PRSS1', 'ZNF479', 'MAGEB3', 'ZCCHC13', 'PPY', 'SNORA51', 'OR5H14', 'LINC00696', 'RAX2', 'WFDC5', 'OR4A16', 'GPR78', 'CLEC6A', 'ASB17', 'OR5T2', 'VWC2L', 'PSG7', 'ALPPL2', 'SST', 'PLG', 'ANKUB1', 'LINC00575', 'NOX3', 'SCARNA11', 'OR1S2', 'SNORA34', 'PLET1', 'LEUTX', 'LINC00523', 'RPL13AP17', 'OR1N1', 'LOC145845', 'ADAM18', 'TPD52L3', 'LINC01205', 'C18ORF42', 'POTED', 'ALOX12B', 'OR2G2', 'XAGE5', 'OR6M1', 'AMTN', 'OR2M2', 'HIST1H4F', 'C2ORF83', 'ARSF', 'SSX5', 'SFTA3', 'ARHGAP36', 'OR9G4', 'EPPIN', 'SLC1A6', 'ACTR3BP2', 'RESP18', 'OR11H4', 'OR4S1', 'ARR3', 'MBD3L5', 'OR2A2', 'LINC00488', 'CABS1', 'FMR1NB', 'TAAR9', 'PLSCR5', 'HNRNPCL1', 'SNORD89', 'TSGA13', 'ACTRT2', 'ZPBP', 'PROKR1', 'GH1', 'LINC01101', 'KRT13', 'BPIFA3', 'OPN1MW', 'OR4D9', 'SNORA70B', 'DEFB126', 'LINC00934', 'PROP1', 'SNORA1', 'FAM27B', 'OR8G5', 'CLCA4', 'ZIM3', 'PWAR4', 'CASC8', 'GABRG3', 'TRHR', 'CLRN2', 'ADGRG7', 'SPATA31C1', 'PRAMEF20', 'RGS8', 'RTP2', 'STATH', 'TCERG1L', 'ZAR1', 'COL6A4P1', 'MYBPHL', 'TMEM72', 'OR8G2', 'KRTAP25-1', 'OR2M4', 'CYP2W1', 'KRTAP19-8', 'SVOP', 'WFDC8', 'LINC00114', 'OR8H2', 'SLC38A8', 'OR2M7', 'SERPINB3', 'SLC32A1', 'LHX9', 'HYALP1', 'LINC00636', 'GYPB', 'NKAIN3', 'OR2T35', 'KRTAP6-1', 'HBD', 'KCNQ1DN', 'OR4C16', 'KRTAP19-2', 'DUXA', 'OR6Y1', 'IQCJ', 'LGI3', 'SPACA7', 'DAOA', 'OR7A17', 'FAM169B', 'OR2L8', 'HSFY2', 'SPANXA2', 'PPY2P', 'B3GNT6', 'DEFB104A', 'UGT2A3', 'OR6B3', 'TCP10', 'OR4K17', 'RHAG', 'SNORA38B', 'CTRB1', 'KRT3', 'INS', 'LINC00200', 'SPDYC', 'PRKAG3', 'OLIG1', 'KRTAP10-12', 'MYH1', 'LINC01566', 'FAM71C', 'LINC01565', 'PABPC1L2A', 'TRPV5', 'FDCSP', 'OR8J3', 'FTMT', 'INSM2', 'NEU2', 'TBC1D3P2', 'PPIAL4E', 'DYDC1', 'SFTPC', 'PRR27', 'MYF5', 'ACER1', 'DEFB129', 'HPD', 'IVL', 'C9ORF135', 'SNORD115-26', 'FBXW12', 'C3ORF30', 'IL13', 'MMD2', 'SLC51B', 'ITIH1', 'TEX13B', 'OR2AT4', 'HMX3', 'DNTT', 'CT47A1', 'OR6B2', 'KRTAP4-3', 'GSTA5', 'FAM27L', 'GPR148', 'OR1K1', 'LINC00602', 'AVPR1B', 'PRG1', 'C11ORF94', 'APOC3', 'LCN9', 'CYP2C18', 'SCARNA8', 'TAS2R60', 'KRTAP10-7', 'ZFAT-AS1', 'UCMA', 'SCN1A', 'LINC00113', 'FTHL17', 'HHLA1', 'LCE1D', 'PYDC2', 'OR11L1', 'GUCY2EP', 'CYLC2', 'KRTAP10-1', 'CSNK1A1P1', 'CCDC37', 'OR5M10', 'SPINK1', 'PSKH2', 'SULT1C3', 'CYP11B2', 'SNORD94', 'CYP7A1', 'CCK', 'SLC25A31', 'C20ORF173', 'OR5M8', 'LRRTM1', 'LOC729609', 'EPB42', 'TTTY8', 'TTTY9B', 'SLC17A6', 'EPGN', 'LYZL1', 'CGB8', 'SNORA77', 'CHIAP2', 'SPATA19', 'FAM138D', 'OLFM3', 'PCGEM1', 'UGT1A4', 'GBX2', 'SBSN', 'ACOT12', 'HBG2', 'CPLX3', 'REG4', 'PSG11', 'CNTNAP4', 'KRTAP21-1', 'SNORA47', 'KRTAP3-2', 'FFAR1', 'ABRA', 'TMEM202', 'HAO1', 'BOLL', 'ANGPTL3', 'ASAP1-IT1', 'SNCB', 'MMP20', 'LCN1', 'OR52K1', 'PRAMEF1', 'SPACA3', 'MUSK', 'PRDM9', 'SLITRK3', 'FOXN3-AS2', 'CCDC166', 'OR6K6', 'AADAC', 'KRTAP19-6', 'OR51G2', 'INSC', 'CCL24', 'UGT2B28', 'NKX2-1', 'OR2W1', 'DPRX', 'DPPA5', 'SNAR-F', 'MGC27382', 'CFHR4', 'NCAN', 'BRINP3', 'AWAT1', 'FOXD4L3', 'LOC285847', 'KRTAP2-1', 'CRLF2', 'DEFB123', 'BMP15', 'C1ORF94', 'IL17F', 'ENAM', 'TSKS', 'IQCF6', 'DPPA2', 'OR4C12', 'SPRR2E', 'DUSP21', 'LINC00923', 'APCS', 'KCNIP4-IT1', 'GRK1', 'OR51I2', 'PRSS54', 'MAGEA5', 'CRYGB', 'GAGE12F', 'ARL13A', 'OR56A1', 'MAP3K15', 'ASB11', 'DKFZP434K028', 'OR5H1', 'KRT25', 'NYX', 'CA6', 'NTS', 'C10ORF120', 'GCSAML-AS1', 'SLC10A1', 'SLC6A5', 'RPL3L', 'KRTAP10-6', 'IZUMO1R', 'MMP23A', 'MTNR1B', 'DAW1', 'BANF2', 'PROKR2', 'FAM74A3', 'NXNL1', 'TMPRSS12', 'OR6K2', 'PAPOLB', 'KRTAP10-3', 'OR12D2', 'AQP2', 'CD200R1L', 'FAM138B', 'OR6C2', 'LINC01312', 'LINC00410', 'IGLL3P', 'ADAM29', 'TFF2', 'NUTM1', 'SLURP1', 'KRTAP19-3', 'KRTAP5-4', 'AKR1C8P', 'TMEM88B', 'GOLGA6L1', 'OR4D5', 'KCNMB2', 'OTOL1', 'GRIN2B', 'YWHAEP7', 'ANP32D', 'OR1L1', 'TTTY15', 'SFTPB', 'NMUR2', 'IL3', 'OR51F2', 'YIPF7', 'USP9Y', 'CSN3', 'FAM71B', 'NEUROD1', 'OR2T10', 'OR2M3', 'OR10W1', 'ZNF705A', 'GPHA2', 'HBE1', 'SLC22A10', 'SNAR-G1', 'SNORA59B', 'PRB4', 'LRRC30', 'RBPJL', 'MAGEA9B', 'OR1B1', 'TARM1', 'AMER3', 'OR51B5', 'EDDM3B', 'TRIM48', 'GABRR3', 'IL36RN', 'URAD', 'RPS4Y2', 'KRTAP9-2', 'SDR16C6P', 'SLC9C1', 'SCTR', 'OCSTAMP', 'OR52R1', 'C16ORF90', 'PLA2G12B', 'NKX2-3', 'MUC2', 'SPANXN3', 'OR6A2', 'COX7B2', 'SYT14P1', 'OR7D4', 'SNORA76C', 'USH1C', 'TNP1', 'SPZ1', 'SNORD15B', 'AKR1D1', 'OR8I2', 'PSG4', 'BCYRN1', 'SHH', 'CCL15-CCL14', 'B4GALNT2', 'HULC', 'TBC1D21', 'OR13C9', 'FIGLA', 'ZNF679', 'OR5M3', 'PTH2', 'OR2L1P', 'TCEB3C', 'DEFB124', 'TRHDE', 'ANKRD34C', 'DEFB113', 'DMP1', 'GKN2', 'SNAR-I', 'CD300LD', 'DDI1', 'SNAR-E', 'GPR22', 'BPIFB4', 'CTRB2', 'CPA2', 'ADGRD2', 'KRTAP1-5', 'XKR7', 'OR10G8', 'BPIFB3', 'PPP1R2P9', 'SNORA36A', 'FKBP6', 'VIL1', 'SLC36A3', 'PCDH8', 'FAM41AY1', 'ACSM2B', 'AADACL3', 'SNORD97', 'NEUROD6', 'LINC00520', 'MAGEA1', 'CHRNB3', 'OR2AG1', 'OR4D2', 'C12ORF50', 'PRAC1', 'SH2D7', 'OACYLP', 'DISC2', 'NXPE1', 'USP50', 'BHLHE23', 'MYH7', 'CALCB', 'LOC284798', 'DEFB110', 'RAPGEF4-AS1', 'AIRE', 'KGFLP1', 'RFX6', 'CPNE4', 'CNGB1', 'CETN1', 'C2ORF27B', 'SSX9', 'SLC5A8', 'C11ORF40', 'LOC400736', 'SLCO1B7', 'TNFSF18', 'KRTAP1-1', 'KRT71', 'PRMT8', 'POU4F1', 'DMRT1', 'FAM183CP', 'KCNK4', 'ASB15', 'SCEL', 'GLYATL3', 'NEUROG3', 'CA5A', 'SNORA27', 'OR2L2', 'XIRP2', 'UGT2B10', 'FAM47C', 'NF1P2', 'DEFB118', 'TRIM75P', 'LINC00029', 'KCNJ16', 'CACNG7', 'HTR1A', 'DSCR10', 'MIR1-1HG', 'OR2A14', 'CD1B', 'OR8D4', 'GAGE2B', 'SPATA3', 'CIB4', 'HYMAI', 'ARL14', 'PRL', 'LOC100132831', 'FMO9P', 'HGC6.3', 'BTF3P11', 'OR52N1', 'SNORA16B', 'CDH10', 'HRK', 'KRTAP11-1', 'LINC00479', 'OR10H2', 'SNORA58', 'C12ORF42', 'LINC00202-2', 'C6ORF10', 'ODF3', 'GFI1B', 'OR1L4', 'OVCH1', 'HSD52', 'POU4F2', 'HIST1H3A', 'FAM19A1', 'HOXC12', 'OR52N2', 'NPB', 'ADRB3', 'HIST2H2AB', 'HIST1H3F', 'RAET1L', 'SNORA2B', 'HCRTR2', 'SPOCK3', 'SCARNA1', 'GPR52', 'SLC39A12', 'ANKRD20A20P', 'XAGE3', 'HTR2C', 'IFNL1', 'GSC2', 'DEFB109P1', 'CLRN1-AS1', 'SPINT3', 'HPVC1', 'HHATL', 'CYP2A7', 'SLC2A2', 'OR2A12', 'HIST1H2BM', 'RNF222', 'IGFBP1', 'NEUROG1', 'CA4', 'TPSD1', 'SERPINB11', 'NKX6-2', 'OR5H2', 'AATK-AS1', 'KRT12', 'KLRC4', 'LINC00314', 'FOXG1', 'GABBR2', 'SNORA72', 'MYH16', 'LOC647859', 'OR51T1', 'CRYGC', 'OR5M1', 'FOXE3', 'GBA3', 'LINC00710', 'CRISP2', 'EXD1', 'F2', 'TRPM3', 'CLCA3P', 'SLC13A1', 'LOC285627', 'CGB2', 'MROH5', 'LINC00452', 'LINC00964', 'PLD5', 'LINC00691', 'KRTAP12-1', 'OR51L1', 'LOC400940', 'OR4N4', 'MYL1', 'TMEM207', 'FAM170A', 'SCGB3A2', 'PTCHD3', 'NYAP2', 'OR51A2', 'C5ORF47', 'FAM92A1P2', 'IGLL1', 'FRMPD2', 'HBM', 'POU4F3', 'POU6F2', 'PRSS48', 'TSHB', 'LINC01105', 'OR10AD1', 'FOXI3', 'SNORA68', 'STON1-GTF2A1L', 'S100A12', 'B3GALT1', 'TKTL2', 'C12ORF56', 'C1ORF146', 'MEP1A', 'OR3A2', 'MT1B', 'CACNG3', 'LOC100130417', 'ALAS2', 'DPP10', 'MAGEA11', 'SLC22A12', 'INS-IGF2', 'PRAMEF14', 'ART1', 'OR13C2', 'SSX8', 'CLEC18C', 'ZIC5', 'OR5A1', 'GH2', 'GPRC6A', 'MYH4', 'OR5E1P', 'OR52K2', 'OR13H1', 'MAGEB4', 'PAQR9', 'HIST1H3B', 'LOC391343', 'C11ORF87', 'CCL7', 'CWH43', 'PDX1', 'VSTM5', 'NHLH2', 'SPANXN2', 'HMHB1', 'PCSK2', 'FGF16', 'FAM9B', 'SNORA64', 'PAEP', 'FAM71E2', 'FEZF1', 'PATE3', 'FRG2DP', 'DACH2', 'DAPL1', 'LOC100130264', 'LOC100129055', 'MYADML', 'FEZF2', 'MMP21', 'ABCA13', 'TBATA', 'SNORA16A', 'HIST1H4B', 'CYP1A2', 'BRDT', 'LINC00608', 'OTC', 'IFNE', 'CASR', 'MAGEA12', 'GABRA3', 'SLITRK1', 'GABRB1', 'OR52A1', 'KLK12', 'IFNL2', 'TAS2R42', 'SPRR1B', 'C4ORF51', 'GJA10', 'OR12D3', 'GJB7', 'GPR61', 'MYL2', 'TBX20', 'OR2T2', 'KAAG1', 'SPRR2G', 'VAX1', 'ISL1', 'C17ORF78', 'GCKR', 'RNF151', 'LINC00652', 'KRT18P55', 'PLCZ1', 'OR7A5', 'KRTAP10-4', 'OR9K2', 'ADCYAP1R1', 'S100A7', 'ZG16', 'KRTAP4-5', 'FOXR1', 'KRT73', 'CST13P', 'OPRM1', 'SPINK14', 'FSHR', 'OR5K1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.85815143049925e-15 NRMSE: 4.484280788906654e-16 MAPE: 3.4183793796834463e-13 Pearson Correlation: 0.45916469604841786 Spearman Correlation: 0.3689835138035314 Coefficient of Determination: -0.3392466439385289 RMSE: 0.4840502539151961 NRMSE: 0.2630722199116279 MAPE: 88.5071051977871 Predictor: ElasticNet Pearson Correlation: 0.9287134430040838 Spearman Correlation: 0.801615432763587 Coefficient of Determination: 0.8476668333036598 RMSE: 0.20014401744313132 NRMSE: 0.04830079818595249 MAPE: 61.69280533252931 Pearson Correlation: 0.714661206963719 Spearman Correlation: 0.6485855038532827 Coefficient of Determination: 0.48977532970631366 RMSE: 0.2987726889579065 NRMSE: 0.16237734387573113 MAPE: 49.27187333315319 Predictor: RandomForests Pearson Correlation: 0.8599635242538168 Spearman Correlation: 0.7114432237816355 Coefficient of Determination: 0.7347948204736499 RMSE: 0.264080527446936 NRMSE: 0.06373060970797499 MAPE: 68.77355026907242 Pearson Correlation: 0.8385297451775151 Spearman Correlation: 0.7373441570067537 Coefficient of Determination: 0.7002943562069117 RMSE: 0.2289853139154592 NRMSE: 0.12444921652588288 MAPE: 40.90888980239014 Protein: CCND1 x_train_column_count: 1030 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'OR8B3', 'LGALS14', 'OR52A4P', 'OR52B4', 'CT45A1', 'ARL5C', 'GYS2', 'SERPINI2', 'OR9A2', 'TMEM252', 'TMPRSS11F', 'TMPRSS11B', 'C10ORF53', 'TTTY2', 'MOGAT3', 'SNORA37', 'OR4F15', 'OR6S1', 'OR14C36', 'NXF2B', 'LINC00895', 'F13B', 'CGB5', 'LINC00469', 'HTR5A', 'HBG1', 'TCP10L2', 'IFNA16', 'OR10V1', 'FGA', 'PRSS1', 'ZNF479', 'MAGEB3', 'ZCCHC13', 'PPY', 'SNORA51', 'OR5H14', 'LINC00696', 'RAX2', 'WFDC5', 'OR4A16', 'GPR78', 'CLEC6A', 'ASB17', 'OR5T2', 'VWC2L', 'PSG7', 'ALPPL2', 'SST', 'PLG', 'ANKUB1', 'LINC00575', 'NOX3', 'SCARNA11', 'OR1S2', 'SNORA34', 'PLET1', 'LEUTX', 'LINC00523', 'RPL13AP17', 'OR1N1', 'LOC145845', 'ADAM18', 'TPD52L3', 'LINC01205', 'C18ORF42', 'POTED', 'ALOX12B', 'OR2G2', 'XAGE5', 'OR6M1', 'AMTN', 'OR2M2', 'HIST1H4F', 'C2ORF83', 'ARSF', 'SSX5', 'SFTA3', 'ARHGAP36', 'OR9G4', 'EPPIN', 'SLC1A6', 'ACTR3BP2', 'RESP18', 'OR11H4', 'OR4S1', 'ARR3', 'MBD3L5', 'OR2A2', 'LINC00488', 'CABS1', 'FMR1NB', 'TAAR9', 'PLSCR5', 'HNRNPCL1', 'SNORD89', 'TSGA13', 'ACTRT2', 'ZPBP', 'PROKR1', 'GH1', 'LINC01101', 'KRT13', 'BPIFA3', 'OPN1MW', 'OR4D9', 'SNORA70B', 'DEFB126', 'LINC00934', 'PROP1', 'SNORA1', 'FAM27B', 'OR8G5', 'CLCA4', 'ZIM3', 'PWAR4', 'CASC8', 'GABRG3', 'TRHR', 'CLRN2', 'ADGRG7', 'SPATA31C1', 'PRAMEF20', 'RGS8', 'RTP2', 'STATH', 'TCERG1L', 'ZAR1', 'COL6A4P1', 'MYBPHL', 'TMEM72', 'OR8G2', 'KRTAP25-1', 'OR2M4', 'CYP2W1', 'KRTAP19-8', 'SVOP', 'WFDC8', 'LINC00114', 'OR8H2', 'SLC38A8', 'OR2M7', 'SERPINB3', 'SLC32A1', 'LHX9', 'HYALP1', 'LINC00636', 'GYPB', 'NKAIN3', 'OR2T35', 'KRTAP6-1', 'HBD', 'KCNQ1DN', 'OR4C16', 'KRTAP19-2', 'DUXA', 'OR6Y1', 'IQCJ', 'LGI3', 'SPACA7', 'DAOA', 'OR7A17', 'FAM169B', 'OR2L8', 'HSFY2', 'SPANXA2', 'PPY2P', 'B3GNT6', 'DEFB104A', 'UGT2A3', 'OR6B3', 'TCP10', 'OR4K17', 'RHAG', 'SNORA38B', 'CTRB1', 'KRT3', 'INS', 'LINC00200', 'SPDYC', 'PRKAG3', 'OLIG1', 'KRTAP10-12', 'MYH1', 'LINC01566', 'FAM71C', 'LINC01565', 'PABPC1L2A', 'TRPV5', 'FDCSP', 'OR8J3', 'FTMT', 'INSM2', 'NEU2', 'TBC1D3P2', 'PPIAL4E', 'DYDC1', 'SFTPC', 'PRR27', 'MYF5', 'ACER1', 'DEFB129', 'HPD', 'IVL', 'C9ORF135', 'SNORD115-26', 'FBXW12', 'C3ORF30', 'IL13', 'MMD2', 'SLC51B', 'ITIH1', 'TEX13B', 'OR2AT4', 'HMX3', 'DNTT', 'CT47A1', 'OR6B2', 'KRTAP4-3', 'GSTA5', 'FAM27L', 'GPR148', 'OR1K1', 'LINC00602', 'AVPR1B', 'PRG1', 'C11ORF94', 'APOC3', 'LCN9', 'CYP2C18', 'SCARNA8', 'TAS2R60', 'KRTAP10-7', 'ZFAT-AS1', 'UCMA', 'SCN1A', 'LINC00113', 'FTHL17', 'HHLA1', 'LCE1D', 'PYDC2', 'OR11L1', 'GUCY2EP', 'CYLC2', 'KRTAP10-1', 'CSNK1A1P1', 'CCDC37', 'OR5M10', 'SPINK1', 'PSKH2', 'SULT1C3', 'CYP11B2', 'SNORD94', 'CYP7A1', 'CCK', 'SLC25A31', 'C20ORF173', 'OR5M8', 'LRRTM1', 'LOC729609', 'EPB42', 'TTTY8', 'TTTY9B', 'SLC17A6', 'EPGN', 'LYZL1', 'CGB8', 'SNORA77', 'CHIAP2', 'SPATA19', 'FAM138D', 'OLFM3', 'PCGEM1', 'UGT1A4', 'GBX2', 'SBSN', 'ACOT12', 'HBG2', 'CPLX3', 'REG4', 'PSG11', 'CNTNAP4', 'KRTAP21-1', 'SNORA47', 'KRTAP3-2', 'FFAR1', 'ABRA', 'TMEM202', 'HAO1', 'BOLL', 'ANGPTL3', 'ASAP1-IT1', 'SNCB', 'MMP20', 'LCN1', 'OR52K1', 'PRAMEF1', 'SPACA3', 'MUSK', 'PRDM9', 'SLITRK3', 'FOXN3-AS2', 'CCDC166', 'OR6K6', 'AADAC', 'KRTAP19-6', 'OR51G2', 'INSC', 'CCL24', 'UGT2B28', 'NKX2-1', 'OR2W1', 'DPRX', 'DPPA5', 'SNAR-F', 'MGC27382', 'CFHR4', 'NCAN', 'BRINP3', 'AWAT1', 'FOXD4L3', 'LOC285847', 'KRTAP2-1', 'CRLF2', 'DEFB123', 'BMP15', 'C1ORF94', 'IL17F', 'ENAM', 'TSKS', 'IQCF6', 'DPPA2', 'OR4C12', 'SPRR2E', 'DUSP21', 'LINC00923', 'APCS', 'KCNIP4-IT1', 'GRK1', 'OR51I2', 'PRSS54', 'MAGEA5', 'CRYGB', 'GAGE12F', 'ARL13A', 'OR56A1', 'MAP3K15', 'ASB11', 'DKFZP434K028', 'OR5H1', 'KRT25', 'NYX', 'CA6', 'NTS', 'C10ORF120', 'GCSAML-AS1', 'SLC10A1', 'SLC6A5', 'RPL3L', 'KRTAP10-6', 'IZUMO1R', 'MMP23A', 'MTNR1B', 'DAW1', 'BANF2', 'PROKR2', 'FAM74A3', 'NXNL1', 'TMPRSS12', 'OR6K2', 'PAPOLB', 'KRTAP10-3', 'OR12D2', 'AQP2', 'CD200R1L', 'FAM138B', 'OR6C2', 'LINC01312', 'LINC00410', 'IGLL3P', 'ADAM29', 'TFF2', 'NUTM1', 'SLURP1', 'KRTAP19-3', 'KRTAP5-4', 'AKR1C8P', 'TMEM88B', 'GOLGA6L1', 'OR4D5', 'KCNMB2', 'OTOL1', 'GRIN2B', 'YWHAEP7', 'ANP32D', 'OR1L1', 'TTTY15', 'SFTPB', 'NMUR2', 'IL3', 'OR51F2', 'YIPF7', 'USP9Y', 'CSN3', 'FAM71B', 'NEUROD1', 'OR2T10', 'OR2M3', 'OR10W1', 'ZNF705A', 'GPHA2', 'HBE1', 'SLC22A10', 'SNAR-G1', 'SNORA59B', 'PRB4', 'LRRC30', 'RBPJL', 'MAGEA9B', 'OR1B1', 'TARM1', 'AMER3', 'OR51B5', 'EDDM3B', 'TRIM48', 'GABRR3', 'IL36RN', 'URAD', 'RPS4Y2', 'KRTAP9-2', 'SDR16C6P', 'SLC9C1', 'SCTR', 'OCSTAMP', 'OR52R1', 'C16ORF90', 'PLA2G12B', 'NKX2-3', 'MUC2', 'SPANXN3', 'OR6A2', 'COX7B2', 'SYT14P1', 'OR7D4', 'SNORA76C', 'USH1C', 'TNP1', 'SPZ1', 'SNORD15B', 'AKR1D1', 'OR8I2', 'PSG4', 'BCYRN1', 'SHH', 'CCL15-CCL14', 'B4GALNT2', 'HULC', 'TBC1D21', 'OR13C9', 'FIGLA', 'ZNF679', 'OR5M3', 'PTH2', 'OR2L1P', 'TCEB3C', 'DEFB124', 'TRHDE', 'ANKRD34C', 'DEFB113', 'DMP1', 'GKN2', 'SNAR-I', 'CD300LD', 'DDI1', 'SNAR-E', 'GPR22', 'BPIFB4', 'CTRB2', 'CPA2', 'ADGRD2', 'KRTAP1-5', 'XKR7', 'OR10G8', 'BPIFB3', 'PPP1R2P9', 'SNORA36A', 'FKBP6', 'VIL1', 'SLC36A3', 'PCDH8', 'FAM41AY1', 'ACSM2B', 'AADACL3', 'SNORD97', 'NEUROD6', 'LINC00520', 'MAGEA1', 'CHRNB3', 'OR2AG1', 'OR4D2', 'C12ORF50', 'PRAC1', 'SH2D7', 'OACYLP', 'DISC2', 'NXPE1', 'USP50', 'BHLHE23', 'MYH7', 'CALCB', 'LOC284798', 'DEFB110', 'RAPGEF4-AS1', 'AIRE', 'KGFLP1', 'RFX6', 'CPNE4', 'CNGB1', 'CETN1', 'C2ORF27B', 'SSX9', 'SLC5A8', 'C11ORF40', 'LOC400736', 'SLCO1B7', 'TNFSF18', 'KRTAP1-1', 'KRT71', 'PRMT8', 'POU4F1', 'DMRT1', 'FAM183CP', 'KCNK4', 'ASB15', 'SCEL', 'GLYATL3', 'NEUROG3', 'CA5A', 'SNORA27', 'OR2L2', 'XIRP2', 'UGT2B10', 'FAM47C', 'NF1P2', 'DEFB118', 'TRIM75P', 'LINC00029', 'KCNJ16', 'CACNG7', 'HTR1A', 'DSCR10', 'MIR1-1HG', 'OR2A14', 'CD1B', 'OR8D4', 'GAGE2B', 'SPATA3', 'CIB4', 'HYMAI', 'ARL14', 'PRL', 'LOC100132831', 'FMO9P', 'HGC6.3', 'BTF3P11', 'OR52N1', 'SNORA16B', 'CDH10', 'HRK', 'KRTAP11-1', 'LINC00479', 'OR10H2', 'SNORA58', 'C12ORF42', 'LINC00202-2', 'C6ORF10', 'ODF3', 'GFI1B', 'OR1L4', 'OVCH1', 'HSD52', 'POU4F2', 'HIST1H3A', 'FAM19A1', 'HOXC12', 'OR52N2', 'NPB', 'ADRB3', 'HIST2H2AB', 'HIST1H3F', 'RAET1L', 'SNORA2B', 'HCRTR2', 'SPOCK3', 'SCARNA1', 'GPR52', 'SLC39A12', 'ANKRD20A20P', 'XAGE3', 'HTR2C', 'IFNL1', 'GSC2', 'DEFB109P1', 'CLRN1-AS1', 'SPINT3', 'HPVC1', 'HHATL', 'CYP2A7', 'SLC2A2', 'OR2A12', 'HIST1H2BM', 'RNF222', 'IGFBP1', 'NEUROG1', 'CA4', 'TPSD1', 'SERPINB11', 'NKX6-2', 'OR5H2', 'AATK-AS1', 'KRT12', 'KLRC4', 'LINC00314', 'FOXG1', 'GABBR2', 'SNORA72', 'MYH16', 'LOC647859', 'OR51T1', 'CRYGC', 'OR5M1', 'FOXE3', 'GBA3', 'LINC00710', 'CRISP2', 'EXD1', 'F2', 'TRPM3', 'CLCA3P', 'SLC13A1', 'LOC285627', 'CGB2', 'MROH5', 'LINC00452', 'LINC00964', 'PLD5', 'LINC00691', 'KRTAP12-1', 'OR51L1', 'LOC400940', 'OR4N4', 'MYL1', 'TMEM207', 'FAM170A', 'SCGB3A2', 'PTCHD3', 'NYAP2', 'OR51A2', 'C5ORF47', 'FAM92A1P2', 'IGLL1', 'FRMPD2', 'HBM', 'POU4F3', 'POU6F2', 'PRSS48', 'TSHB', 'LINC01105', 'OR10AD1', 'FOXI3', 'SNORA68', 'STON1-GTF2A1L', 'S100A12', 'B3GALT1', 'TKTL2', 'C12ORF56', 'C1ORF146', 'MEP1A', 'OR3A2', 'MT1B', 'CACNG3', 'LOC100130417', 'ALAS2', 'DPP10', 'MAGEA11', 'SLC22A12', 'INS-IGF2', 'PRAMEF14', 'ART1', 'OR13C2', 'SSX8', 'CLEC18C', 'ZIC5', 'OR5A1', 'GH2', 'GPRC6A', 'MYH4', 'OR5E1P', 'OR52K2', 'OR13H1', 'MAGEB4', 'PAQR9', 'HIST1H3B', 'LOC391343', 'C11ORF87', 'CCL7', 'CWH43', 'PDX1', 'VSTM5', 'NHLH2', 'SPANXN2', 'HMHB1', 'PCSK2', 'FGF16', 'FAM9B', 'SNORA64', 'PAEP', 'FAM71E2', 'FEZF1', 'PATE3', 'FRG2DP', 'DACH2', 'DAPL1', 'LOC100130264', 'LOC100129055', 'MYADML', 'FEZF2', 'MMP21', 'ABCA13', 'TBATA', 'SNORA16A', 'HIST1H4B', 'CYP1A2', 'BRDT', 'LINC00608', 'OTC', 'IFNE', 'CASR', 'MAGEA12', 'GABRA3', 'SLITRK1', 'GABRB1', 'OR52A1', 'KLK12', 'IFNL2', 'TAS2R42', 'SPRR1B', 'C4ORF51', 'GJA10', 'OR12D3', 'GJB7', 'GPR61', 'MYL2', 'TBX20', 'OR2T2', 'KAAG1', 'SPRR2G', 'VAX1', 'ISL1', 'C17ORF78', 'GCKR', 'RNF151', 'LINC00652', 'KRT18P55', 'PLCZ1', 'OR7A5', 'KRTAP10-4', 'OR9K2', 'ADCYAP1R1', 'S100A7', 'ZG16', 'KRTAP4-5', 'FOXR1', 'KRT73', 'CST13P', 'OPRM1', 'SPINK14', 'FSHR', 'OR5K1', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.128921860967384e-15 NRMSE: 6.786751758229335e-16 MAPE: 2.6820048325418896e-12 Pearson Correlation: -0.03026744844434502 Spearman Correlation: 0.01955906740805775 Coefficient of Determination: -2.8452394338138824 RMSE: 0.46166058323413134 NRMSE: 0.35716762334756713 MAPE: 1323.7715082919597 Predictor: ElasticNet Pearson Correlation: 0.7495012410707788 Spearman Correlation: 0.7364896161641383 Coefficient of Determination: 0.4925865281113847 RMSE: 0.17006442483088674 NRMSE: 0.10223781416051674 MAPE: 434.09951198485413 Pearson Correlation: 0.28777004212517576 Spearman Correlation: 0.3275436542776315 Coefficient of Determination: 0.07678056374799369 RMSE: 0.226210922934607 NRMSE: 0.17500999793789612 MAPE: 398.21002960930855 Predictor: RandomForests Pearson Correlation: 0.5679263715240153 Spearman Correlation: 0.5773942980542337 Coefficient of Determination: 0.2914974179195303 RMSE: 0.2009570267248468 NRMSE: 0.12080955304423827 MAPE: 478.26716916424664 Pearson Correlation: 0.26095589825475696 Spearman Correlation: 0.4246463759633207 Coefficient of Determination: 0.052432886711420656 RMSE: 0.22917439414894883 NRMSE: 0.1773027125618531 MAPE: 314.74679040564695 Protein: ERBB2 x_train_column_count: 1030 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'OR8B3', 'LGALS14', 'OR52A4P', 'OR52B4', 'CT45A1', 'ARL5C', 'GYS2', 'SERPINI2', 'OR9A2', 'TMEM252', 'TMPRSS11F', 'TMPRSS11B', 'C10ORF53', 'TTTY2', 'MOGAT3', 'SNORA37', 'OR4F15', 'OR6S1', 'OR14C36', 'NXF2B', 'LINC00895', 'F13B', 'CGB5', 'LINC00469', 'HTR5A', 'HBG1', 'TCP10L2', 'IFNA16', 'OR10V1', 'FGA', 'PRSS1', 'ZNF479', 'MAGEB3', 'ZCCHC13', 'PPY', 'SNORA51', 'OR5H14', 'LINC00696', 'RAX2', 'WFDC5', 'OR4A16', 'GPR78', 'CLEC6A', 'ASB17', 'OR5T2', 'VWC2L', 'PSG7', 'ALPPL2', 'SST', 'PLG', 'ANKUB1', 'LINC00575', 'NOX3', 'SCARNA11', 'OR1S2', 'SNORA34', 'PLET1', 'LEUTX', 'LINC00523', 'RPL13AP17', 'OR1N1', 'LOC145845', 'ADAM18', 'TPD52L3', 'LINC01205', 'C18ORF42', 'POTED', 'ALOX12B', 'OR2G2', 'XAGE5', 'OR6M1', 'AMTN', 'OR2M2', 'HIST1H4F', 'C2ORF83', 'ARSF', 'SSX5', 'SFTA3', 'ARHGAP36', 'OR9G4', 'EPPIN', 'SLC1A6', 'ACTR3BP2', 'RESP18', 'OR11H4', 'OR4S1', 'ARR3', 'MBD3L5', 'OR2A2', 'LINC00488', 'CABS1', 'FMR1NB', 'TAAR9', 'PLSCR5', 'HNRNPCL1', 'SNORD89', 'TSGA13', 'ACTRT2', 'ZPBP', 'PROKR1', 'GH1', 'LINC01101', 'KRT13', 'BPIFA3', 'OPN1MW', 'OR4D9', 'SNORA70B', 'DEFB126', 'LINC00934', 'PROP1', 'SNORA1', 'FAM27B', 'OR8G5', 'CLCA4', 'ZIM3', 'PWAR4', 'CASC8', 'GABRG3', 'TRHR', 'CLRN2', 'ADGRG7', 'SPATA31C1', 'PRAMEF20', 'RGS8', 'RTP2', 'STATH', 'TCERG1L', 'ZAR1', 'COL6A4P1', 'MYBPHL', 'TMEM72', 'OR8G2', 'KRTAP25-1', 'OR2M4', 'CYP2W1', 'KRTAP19-8', 'SVOP', 'WFDC8', 'LINC00114', 'OR8H2', 'SLC38A8', 'OR2M7', 'SERPINB3', 'SLC32A1', 'LHX9', 'HYALP1', 'LINC00636', 'GYPB', 'NKAIN3', 'OR2T35', 'KRTAP6-1', 'HBD', 'KCNQ1DN', 'OR4C16', 'KRTAP19-2', 'DUXA', 'OR6Y1', 'IQCJ', 'LGI3', 'SPACA7', 'DAOA', 'OR7A17', 'FAM169B', 'OR2L8', 'HSFY2', 'SPANXA2', 'PPY2P', 'B3GNT6', 'DEFB104A', 'UGT2A3', 'OR6B3', 'TCP10', 'OR4K17', 'RHAG', 'SNORA38B', 'CTRB1', 'KRT3', 'INS', 'LINC00200', 'SPDYC', 'PRKAG3', 'OLIG1', 'KRTAP10-12', 'MYH1', 'LINC01566', 'FAM71C', 'LINC01565', 'PABPC1L2A', 'TRPV5', 'FDCSP', 'OR8J3', 'FTMT', 'INSM2', 'NEU2', 'TBC1D3P2', 'PPIAL4E', 'DYDC1', 'SFTPC', 'PRR27', 'MYF5', 'ACER1', 'DEFB129', 'HPD', 'IVL', 'C9ORF135', 'SNORD115-26', 'FBXW12', 'C3ORF30', 'IL13', 'MMD2', 'SLC51B', 'ITIH1', 'TEX13B', 'OR2AT4', 'HMX3', 'DNTT', 'CT47A1', 'OR6B2', 'KRTAP4-3', 'GSTA5', 'FAM27L', 'GPR148', 'OR1K1', 'LINC00602', 'AVPR1B', 'PRG1', 'C11ORF94', 'APOC3', 'LCN9', 'CYP2C18', 'SCARNA8', 'TAS2R60', 'KRTAP10-7', 'ZFAT-AS1', 'UCMA', 'SCN1A', 'LINC00113', 'FTHL17', 'HHLA1', 'LCE1D', 'PYDC2', 'OR11L1', 'GUCY2EP', 'CYLC2', 'KRTAP10-1', 'CSNK1A1P1', 'CCDC37', 'OR5M10', 'SPINK1', 'PSKH2', 'SULT1C3', 'CYP11B2', 'SNORD94', 'CYP7A1', 'CCK', 'SLC25A31', 'C20ORF173', 'OR5M8', 'LRRTM1', 'LOC729609', 'EPB42', 'TTTY8', 'TTTY9B', 'SLC17A6', 'EPGN', 'LYZL1', 'CGB8', 'SNORA77', 'CHIAP2', 'SPATA19', 'FAM138D', 'OLFM3', 'PCGEM1', 'UGT1A4', 'GBX2', 'SBSN', 'ACOT12', 'HBG2', 'CPLX3', 'REG4', 'PSG11', 'CNTNAP4', 'KRTAP21-1', 'SNORA47', 'KRTAP3-2', 'FFAR1', 'ABRA', 'TMEM202', 'HAO1', 'BOLL', 'ANGPTL3', 'ASAP1-IT1', 'SNCB', 'MMP20', 'LCN1', 'OR52K1', 'PRAMEF1', 'SPACA3', 'MUSK', 'PRDM9', 'SLITRK3', 'FOXN3-AS2', 'CCDC166', 'OR6K6', 'AADAC', 'KRTAP19-6', 'OR51G2', 'INSC', 'CCL24', 'UGT2B28', 'NKX2-1', 'OR2W1', 'DPRX', 'DPPA5', 'SNAR-F', 'MGC27382', 'CFHR4', 'NCAN', 'BRINP3', 'AWAT1', 'FOXD4L3', 'LOC285847', 'KRTAP2-1', 'CRLF2', 'DEFB123', 'BMP15', 'C1ORF94', 'IL17F', 'ENAM', 'TSKS', 'IQCF6', 'DPPA2', 'OR4C12', 'SPRR2E', 'DUSP21', 'LINC00923', 'APCS', 'KCNIP4-IT1', 'GRK1', 'OR51I2', 'PRSS54', 'MAGEA5', 'CRYGB', 'GAGE12F', 'ARL13A', 'OR56A1', 'MAP3K15', 'ASB11', 'DKFZP434K028', 'OR5H1', 'KRT25', 'NYX', 'CA6', 'NTS', 'C10ORF120', 'GCSAML-AS1', 'SLC10A1', 'SLC6A5', 'RPL3L', 'KRTAP10-6', 'IZUMO1R', 'MMP23A', 'MTNR1B', 'DAW1', 'BANF2', 'PROKR2', 'FAM74A3', 'NXNL1', 'TMPRSS12', 'OR6K2', 'PAPOLB', 'KRTAP10-3', 'OR12D2', 'AQP2', 'CD200R1L', 'FAM138B', 'OR6C2', 'LINC01312', 'LINC00410', 'IGLL3P', 'ADAM29', 'TFF2', 'NUTM1', 'SLURP1', 'KRTAP19-3', 'KRTAP5-4', 'AKR1C8P', 'TMEM88B', 'GOLGA6L1', 'OR4D5', 'KCNMB2', 'OTOL1', 'GRIN2B', 'YWHAEP7', 'ANP32D', 'OR1L1', 'TTTY15', 'SFTPB', 'NMUR2', 'IL3', 'OR51F2', 'YIPF7', 'USP9Y', 'CSN3', 'FAM71B', 'NEUROD1', 'OR2T10', 'OR2M3', 'OR10W1', 'ZNF705A', 'GPHA2', 'HBE1', 'SLC22A10', 'SNAR-G1', 'SNORA59B', 'PRB4', 'LRRC30', 'RBPJL', 'MAGEA9B', 'OR1B1', 'TARM1', 'AMER3', 'OR51B5', 'EDDM3B', 'TRIM48', 'GABRR3', 'IL36RN', 'URAD', 'RPS4Y2', 'KRTAP9-2', 'SDR16C6P', 'SLC9C1', 'SCTR', 'OCSTAMP', 'OR52R1', 'C16ORF90', 'PLA2G12B', 'NKX2-3', 'MUC2', 'SPANXN3', 'OR6A2', 'COX7B2', 'SYT14P1', 'OR7D4', 'SNORA76C', 'USH1C', 'TNP1', 'SPZ1', 'SNORD15B', 'AKR1D1', 'OR8I2', 'PSG4', 'BCYRN1', 'SHH', 'CCL15-CCL14', 'B4GALNT2', 'HULC', 'TBC1D21', 'OR13C9', 'FIGLA', 'ZNF679', 'OR5M3', 'PTH2', 'OR2L1P', 'TCEB3C', 'DEFB124', 'TRHDE', 'ANKRD34C', 'DEFB113', 'DMP1', 'GKN2', 'SNAR-I', 'CD300LD', 'DDI1', 'SNAR-E', 'GPR22', 'BPIFB4', 'CTRB2', 'CPA2', 'ADGRD2', 'KRTAP1-5', 'XKR7', 'OR10G8', 'BPIFB3', 'PPP1R2P9', 'SNORA36A', 'FKBP6', 'VIL1', 'SLC36A3', 'PCDH8', 'FAM41AY1', 'ACSM2B', 'AADACL3', 'SNORD97', 'NEUROD6', 'LINC00520', 'MAGEA1', 'CHRNB3', 'OR2AG1', 'OR4D2', 'C12ORF50', 'PRAC1', 'SH2D7', 'OACYLP', 'DISC2', 'NXPE1', 'USP50', 'BHLHE23', 'MYH7', 'CALCB', 'LOC284798', 'DEFB110', 'RAPGEF4-AS1', 'AIRE', 'KGFLP1', 'RFX6', 'CPNE4', 'CNGB1', 'CETN1', 'C2ORF27B', 'SSX9', 'SLC5A8', 'C11ORF40', 'LOC400736', 'SLCO1B7', 'TNFSF18', 'KRTAP1-1', 'KRT71', 'PRMT8', 'POU4F1', 'DMRT1', 'FAM183CP', 'KCNK4', 'ASB15', 'SCEL', 'GLYATL3', 'NEUROG3', 'CA5A', 'SNORA27', 'OR2L2', 'XIRP2', 'UGT2B10', 'FAM47C', 'NF1P2', 'DEFB118', 'TRIM75P', 'LINC00029', 'KCNJ16', 'CACNG7', 'HTR1A', 'DSCR10', 'MIR1-1HG', 'OR2A14', 'CD1B', 'OR8D4', 'GAGE2B', 'SPATA3', 'CIB4', 'HYMAI', 'ARL14', 'PRL', 'LOC100132831', 'FMO9P', 'HGC6.3', 'BTF3P11', 'OR52N1', 'SNORA16B', 'CDH10', 'HRK', 'KRTAP11-1', 'LINC00479', 'OR10H2', 'SNORA58', 'C12ORF42', 'LINC00202-2', 'C6ORF10', 'ODF3', 'GFI1B', 'OR1L4', 'OVCH1', 'HSD52', 'POU4F2', 'HIST1H3A', 'FAM19A1', 'HOXC12', 'OR52N2', 'NPB', 'ADRB3', 'HIST2H2AB', 'HIST1H3F', 'RAET1L', 'SNORA2B', 'HCRTR2', 'SPOCK3', 'SCARNA1', 'GPR52', 'SLC39A12', 'ANKRD20A20P', 'XAGE3', 'HTR2C', 'IFNL1', 'GSC2', 'DEFB109P1', 'CLRN1-AS1', 'SPINT3', 'HPVC1', 'HHATL', 'CYP2A7', 'SLC2A2', 'OR2A12', 'HIST1H2BM', 'RNF222', 'IGFBP1', 'NEUROG1', 'CA4', 'TPSD1', 'SERPINB11', 'NKX6-2', 'OR5H2', 'AATK-AS1', 'KRT12', 'KLRC4', 'LINC00314', 'FOXG1', 'GABBR2', 'SNORA72', 'MYH16', 'LOC647859', 'OR51T1', 'CRYGC', 'OR5M1', 'FOXE3', 'GBA3', 'LINC00710', 'CRISP2', 'EXD1', 'F2', 'TRPM3', 'CLCA3P', 'SLC13A1', 'LOC285627', 'CGB2', 'MROH5', 'LINC00452', 'LINC00964', 'PLD5', 'LINC00691', 'KRTAP12-1', 'OR51L1', 'LOC400940', 'OR4N4', 'MYL1', 'TMEM207', 'FAM170A', 'SCGB3A2', 'PTCHD3', 'NYAP2', 'OR51A2', 'C5ORF47', 'FAM92A1P2', 'IGLL1', 'FRMPD2', 'HBM', 'POU4F3', 'POU6F2', 'PRSS48', 'TSHB', 'LINC01105', 'OR10AD1', 'FOXI3', 'SNORA68', 'STON1-GTF2A1L', 'S100A12', 'B3GALT1', 'TKTL2', 'C12ORF56', 'C1ORF146', 'MEP1A', 'OR3A2', 'MT1B', 'CACNG3', 'LOC100130417', 'ALAS2', 'DPP10', 'MAGEA11', 'SLC22A12', 'INS-IGF2', 'PRAMEF14', 'ART1', 'OR13C2', 'SSX8', 'CLEC18C', 'ZIC5', 'OR5A1', 'GH2', 'GPRC6A', 'MYH4', 'OR5E1P', 'OR52K2', 'OR13H1', 'MAGEB4', 'PAQR9', 'HIST1H3B', 'LOC391343', 'C11ORF87', 'CCL7', 'CWH43', 'PDX1', 'VSTM5', 'NHLH2', 'SPANXN2', 'HMHB1', 'PCSK2', 'FGF16', 'FAM9B', 'SNORA64', 'PAEP', 'FAM71E2', 'FEZF1', 'PATE3', 'FRG2DP', 'DACH2', 'DAPL1', 'LOC100130264', 'LOC100129055', 'MYADML', 'FEZF2', 'MMP21', 'ABCA13', 'TBATA', 'SNORA16A', 'HIST1H4B', 'CYP1A2', 'BRDT', 'LINC00608', 'OTC', 'IFNE', 'CASR', 'MAGEA12', 'GABRA3', 'SLITRK1', 'GABRB1', 'OR52A1', 'KLK12', 'IFNL2', 'TAS2R42', 'SPRR1B', 'C4ORF51', 'GJA10', 'OR12D3', 'GJB7', 'GPR61', 'MYL2', 'TBX20', 'OR2T2', 'KAAG1', 'SPRR2G', 'VAX1', 'ISL1', 'C17ORF78', 'GCKR', 'RNF151', 'LINC00652', 'KRT18P55', 'PLCZ1', 'OR7A5', 'KRTAP10-4', 'OR9K2', 'ADCYAP1R1', 'S100A7', 'ZG16', 'KRTAP4-5', 'FOXR1', 'KRT73', 'CST13P', 'OPRM1', 'SPINK14', 'FSHR', 'OR5K1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 4.039337939783116e-15 NRMSE: 7.248959926391465e-16 MAPE: 3.84988749973087e-12 Pearson Correlation: 0.5795335465832873 Spearman Correlation: 0.38159691737391477 Coefficient of Determination: 0.1305607074148486 RMSE: 0.9857741901658836 NRMSE: 0.1679428574144988 MAPE: 3269.480011755928 Predictor: ElasticNet Pearson Correlation: 0.9511703028407441 Spearman Correlation: 0.8995389561703928 Coefficient of Determination: 0.8908238428238475 RMSE: 0.3248039292858306 NRMSE: 0.058289024152653406 MAPE: 187.8013502973471 Pearson Correlation: 0.7612849675098025 Spearman Correlation: 0.45490196078431383 Coefficient of Determination: 0.5603061113795123 RMSE: 0.7010242252552206 NRMSE: 0.11943101440537346 MAPE: 1185.7716928205375 Predictor: RandomForests Pearson Correlation: 0.8473030831660952 Spearman Correlation: 0.6681906211191433 Coefficient of Determination: 0.7149787297310523 RMSE: 0.5248026365209767 NRMSE: 0.09418061420256926 MAPE: 278.0644776248489 Pearson Correlation: 0.8055688794409277 Spearman Correlation: 0.5013266156587465 Coefficient of Determination: 0.6272149998545609 RMSE: 0.6454862954719817 NRMSE: 0.10996921400957148 MAPE: 1419.9106432535832 Protein: ERBB3 x_train_column_count: 1030 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'OR7G3', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'C12ORF77', 'DUX4L6', 'TAAR8', 'GUCA1C', 'GJA8', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'CTSL3P', 'SNORA36B', 'FGF6', 'LCE2D', 'BTBD17', 'OR7G1', 'FGF22', 'DEFB127', 'CPN1', 'MRGPRG-AS1', 'SMCP', 'FAM150A', 'LINC00326', 'REXO1L6P', 'CT47B1', 'SCP2D1', 'ST8SIA3', 'CHAT', 'CEACAM20', 'ZNRF4', 'LHX3', 'HNF1B', 'CTXN3', 'ANXA8L1', 'FAM224B', 'LINC01553', 'ESX1', 'CT47A2', 'SLC18A3', 'GNAT3', 'AMBN', 'SCARNA4', 'H1FOO', 'OR6T1', 'CT47A6', 'CT47A7', 'OR7G2', 'SSX6', 'FLG2', 'OC90', 'KRT78', 'KRTAP6-2', 'OR5AN1', 'LINC00671', 'CFHR2', 'DEFB119', 'NR0B1', 'OR4A47', 'OR8B8', 'FAM25BP', 'SEC14L3', 'OR10G4', 'SPAM1', 'LOC727924', 'OR4M2', 'OR10T2', 'SCARNA14', 'LCE1F', 'ATP4B', 'LINC01548', 'GYPA', 'BARHL1', 'CXORF51A', 'KRTAP19-5', 'LCE2A', 'SNORA55', 'CHODL-AS1', 'KRTAP4-11', 'TYR', 'CLCA1', 'SLC28A2', 'NMS', 'SPATA31A3', 'PROL1', 'ASB10', 'CLC', 'SNORA24', 'BTNL3', 'SUN3', 'PSMB11', 'ZNF536', 'SOX1', 'FXYD4', 'C1ORF105', 'C1ORF87', 'KLHL40', 'IL37', 'SNORA28', 'KCNU1', 'OR8U1', 'CSH2', 'GPR50', 'IGFL4', 'OR2B3', 'ZNF804B', 'C22ORF42', 'OLIG3', 'CT47A11', 'SNORD115-7', 'BRDTP1', 'SNORA20', 'GLRA4', 'OR6C76', 'SNORA5B', 'OR2AE1', 'PIWIL3', 'MAGEB10', 'FAM153C', 'CNTNAP5', 'APOA2', 'HAO2', 'IQCF2', 'OR7C2', 'KRT39', 'ASB18', 'SPIC', 'PPBPP1', 'GAGE2C', 'TMEM179', 'OR2T12', 'TSPYL6', 'PLA2G2F', 'AHSP', 'GPR151', 'MC2R', 'OR6C4', 'DEFB128', 'DMBT1P1', 'OLIG2', 'SLCO1A2', 'LELP1', 'SATB2-AS1', 'PRSS3P2', 'FGF4', 'CCKBR', 'OR2C3', 'TEX36-AS1', 'LOC440040', 'TEX33', 'NPHS2', 'BMP10', 'CDKL4', 'LOC100129935', 'MOS', 'IFNA21', 'KRTAP1-3', 'OR5B2', 'OR6B1', 'HTR3B', 'GNAT1', 'SYT10', 'DNAJC5G', 'PSG8', 'OR10S1', 'PRAP1', 'PRAMEF8', 'PSAPL1', 'LINC00111', 'KRTDAP', 'GOLGA8EP', 'RNASE8', 'KRTAP19-1', 'AKAP14', 'ZNF735', 'KRTAP12-2', 'TMEM196', 'CFC1B', 'USP17L6P', 'SLCO6A1', 'NKX2-6', 'NCOR1P1', 'GOT1L1', 'HFE2', 'USP26', 'ITLN2', 'KRTAP10-11', 'FAM24A', 'SNORD15A', 'FLJ25758', 'SPRR4', 'IFNA13', 'SNORA54', 'SOX3', 'KRT2', 'LY6G6D', 'DNMT3L', 'OR52A5', 'SCARNA20', 'FBP2', 'TAGLN3', 'IL31', 'MORC1', 'ARG1', 'MS4A10', 'LINC00207', 'GABRA6', 'TSPY1', 'TSPY2', 'LOC646813', 'OR1M1', 'GABRA1', 'KRTAP12-3', 'GHSR', 'NPBWR2', 'HAND1', 'OR2T29', 'FOXE1', 'LINC01020', 'SERPINB4', 'OTX2', 'OR6C74', 'TGIF2LX', 'SLC25A3P1', 'TMIGD1', 'PRAMEF5', 'OR1E2', 'SCGB1A1', 'FAM71A', 'FGF23', 'GUCA2B', 'C3ORF49', 'SYCP1', 'MRGPRX1', 'OR2T34', 'CYP3A4', 'SNORD116-19', 'ACSM2A', 'VRTN', 'OR4D11', 'OR8B3', 'LGALS14', 'OR52A4P', 'OR52B4', 'CT45A1', 'ARL5C', 'GYS2', 'SERPINI2', 'OR9A2', 'TMEM252', 'TMPRSS11F', 'TMPRSS11B', 'C10ORF53', 'TTTY2', 'MOGAT3', 'SNORA37', 'OR4F15', 'OR6S1', 'OR14C36', 'NXF2B', 'LINC00895', 'F13B', 'CGB5', 'LINC00469', 'HTR5A', 'HBG1', 'TCP10L2', 'IFNA16', 'OR10V1', 'FGA', 'PRSS1', 'ZNF479', 'MAGEB3', 'ZCCHC13', 'PPY', 'SNORA51', 'OR5H14', 'LINC00696', 'RAX2', 'WFDC5', 'OR4A16', 'GPR78', 'CLEC6A', 'ASB17', 'OR5T2', 'VWC2L', 'PSG7', 'ALPPL2', 'SST', 'PLG', 'ANKUB1', 'LINC00575', 'NOX3', 'SCARNA11', 'OR1S2', 'SNORA34', 'PLET1', 'LEUTX', 'LINC00523', 'RPL13AP17', 'OR1N1', 'LOC145845', 'ADAM18', 'TPD52L3', 'LINC01205', 'C18ORF42', 'POTED', 'ALOX12B', 'OR2G2', 'XAGE5', 'OR6M1', 'AMTN', 'OR2M2', 'HIST1H4F', 'C2ORF83', 'ARSF', 'SSX5', 'SFTA3', 'ARHGAP36', 'OR9G4', 'EPPIN', 'SLC1A6', 'ACTR3BP2', 'RESP18', 'OR11H4', 'OR4S1', 'ARR3', 'MBD3L5', 'OR2A2', 'LINC00488', 'CABS1', 'FMR1NB', 'TAAR9', 'PLSCR5', 'HNRNPCL1', 'SNORD89', 'TSGA13', 'ACTRT2', 'ZPBP', 'PROKR1', 'GH1', 'LINC01101', 'KRT13', 'BPIFA3', 'OPN1MW', 'OR4D9', 'SNORA70B', 'DEFB126', 'LINC00934', 'PROP1', 'SNORA1', 'FAM27B', 'OR8G5', 'CLCA4', 'ZIM3', 'PWAR4', 'CASC8', 'GABRG3', 'TRHR', 'CLRN2', 'ADGRG7', 'SPATA31C1', 'PRAMEF20', 'RGS8', 'RTP2', 'STATH', 'TCERG1L', 'ZAR1', 'COL6A4P1', 'MYBPHL', 'TMEM72', 'OR8G2', 'KRTAP25-1', 'OR2M4', 'CYP2W1', 'KRTAP19-8', 'SVOP', 'WFDC8', 'LINC00114', 'OR8H2', 'SLC38A8', 'OR2M7', 'SERPINB3', 'SLC32A1', 'LHX9', 'HYALP1', 'LINC00636', 'GYPB', 'NKAIN3', 'OR2T35', 'KRTAP6-1', 'HBD', 'KCNQ1DN', 'OR4C16', 'KRTAP19-2', 'DUXA', 'OR6Y1', 'IQCJ', 'LGI3', 'SPACA7', 'DAOA', 'OR7A17', 'FAM169B', 'OR2L8', 'HSFY2', 'SPANXA2', 'PPY2P', 'B3GNT6', 'DEFB104A', 'UGT2A3', 'OR6B3', 'TCP10', 'OR4K17', 'RHAG', 'SNORA38B', 'CTRB1', 'KRT3', 'INS', 'LINC00200', 'SPDYC', 'PRKAG3', 'OLIG1', 'KRTAP10-12', 'MYH1', 'LINC01566', 'FAM71C', 'LINC01565', 'PABPC1L2A', 'TRPV5', 'FDCSP', 'OR8J3', 'FTMT', 'INSM2', 'NEU2', 'TBC1D3P2', 'PPIAL4E', 'DYDC1', 'SFTPC', 'PRR27', 'MYF5', 'ACER1', 'DEFB129', 'HPD', 'IVL', 'C9ORF135', 'SNORD115-26', 'FBXW12', 'C3ORF30', 'IL13', 'MMD2', 'SLC51B', 'ITIH1', 'TEX13B', 'OR2AT4', 'HMX3', 'DNTT', 'CT47A1', 'OR6B2', 'KRTAP4-3', 'GSTA5', 'FAM27L', 'GPR148', 'OR1K1', 'LINC00602', 'AVPR1B', 'PRG1', 'C11ORF94', 'APOC3', 'LCN9', 'CYP2C18', 'SCARNA8', 'TAS2R60', 'KRTAP10-7', 'ZFAT-AS1', 'UCMA', 'SCN1A', 'LINC00113', 'FTHL17', 'HHLA1', 'LCE1D', 'PYDC2', 'OR11L1', 'GUCY2EP', 'CYLC2', 'KRTAP10-1', 'CSNK1A1P1', 'CCDC37', 'OR5M10', 'SPINK1', 'PSKH2', 'SULT1C3', 'CYP11B2', 'SNORD94', 'CYP7A1', 'CCK', 'SLC25A31', 'C20ORF173', 'OR5M8', 'LRRTM1', 'LOC729609', 'EPB42', 'TTTY8', 'TTTY9B', 'SLC17A6', 'EPGN', 'LYZL1', 'CGB8', 'SNORA77', 'CHIAP2', 'SPATA19', 'FAM138D', 'OLFM3', 'PCGEM1', 'UGT1A4', 'GBX2', 'SBSN', 'ACOT12', 'HBG2', 'CPLX3', 'REG4', 'PSG11', 'CNTNAP4', 'KRTAP21-1', 'SNORA47', 'KRTAP3-2', 'FFAR1', 'ABRA', 'TMEM202', 'HAO1', 'BOLL', 'ANGPTL3', 'ASAP1-IT1', 'SNCB', 'MMP20', 'LCN1', 'OR52K1', 'PRAMEF1', 'SPACA3', 'MUSK', 'PRDM9', 'SLITRK3', 'FOXN3-AS2', 'CCDC166', 'OR6K6', 'AADAC', 'KRTAP19-6', 'OR51G2', 'INSC', 'CCL24', 'UGT2B28', 'NKX2-1', 'OR2W1', 'DPRX', 'DPPA5', 'SNAR-F', 'MGC27382', 'CFHR4', 'NCAN', 'BRINP3', 'AWAT1', 'FOXD4L3', 'LOC285847', 'KRTAP2-1', 'CRLF2', 'DEFB123', 'BMP15', 'C1ORF94', 'IL17F', 'ENAM', 'TSKS', 'IQCF6', 'DPPA2', 'OR4C12', 'SPRR2E', 'DUSP21', 'LINC00923', 'APCS', 'KCNIP4-IT1', 'GRK1', 'OR51I2', 'PRSS54', 'MAGEA5', 'CRYGB', 'GAGE12F', 'ARL13A', 'OR56A1', 'MAP3K15', 'ASB11', 'DKFZP434K028', 'OR5H1', 'KRT25', 'NYX', 'CA6', 'NTS', 'C10ORF120', 'GCSAML-AS1', 'SLC10A1', 'SLC6A5', 'RPL3L', 'KRTAP10-6', 'IZUMO1R', 'MMP23A', 'MTNR1B', 'DAW1', 'BANF2', 'PROKR2', 'FAM74A3', 'NXNL1', 'TMPRSS12', 'OR6K2', 'PAPOLB', 'KRTAP10-3', 'OR12D2', 'AQP2', 'CD200R1L', 'FAM138B', 'OR6C2', 'LINC01312', 'LINC00410', 'IGLL3P', 'ADAM29', 'TFF2', 'NUTM1', 'SLURP1', 'KRTAP19-3', 'KRTAP5-4', 'AKR1C8P', 'TMEM88B', 'GOLGA6L1', 'OR4D5', 'KCNMB2', 'OTOL1', 'GRIN2B', 'YWHAEP7', 'ANP32D', 'OR1L1', 'TTTY15', 'SFTPB', 'NMUR2', 'IL3', 'OR51F2', 'YIPF7', 'USP9Y', 'CSN3', 'FAM71B', 'NEUROD1', 'OR2T10', 'OR2M3', 'OR10W1', 'ZNF705A', 'GPHA2', 'HBE1', 'SLC22A10', 'SNAR-G1', 'SNORA59B', 'PRB4', 'LRRC30', 'RBPJL', 'MAGEA9B', 'OR1B1', 'TARM1', 'AMER3', 'OR51B5', 'EDDM3B', 'TRIM48', 'GABRR3', 'IL36RN', 'URAD', 'RPS4Y2', 'KRTAP9-2', 'SDR16C6P', 'SLC9C1', 'SCTR', 'OCSTAMP', 'OR52R1', 'C16ORF90', 'PLA2G12B', 'NKX2-3', 'MUC2', 'SPANXN3', 'OR6A2', 'COX7B2', 'SYT14P1', 'OR7D4', 'SNORA76C', 'USH1C', 'TNP1', 'SPZ1', 'SNORD15B', 'AKR1D1', 'OR8I2', 'PSG4', 'BCYRN1', 'SHH', 'CCL15-CCL14', 'B4GALNT2', 'HULC', 'TBC1D21', 'OR13C9', 'FIGLA', 'ZNF679', 'OR5M3', 'PTH2', 'OR2L1P', 'TCEB3C', 'DEFB124', 'TRHDE', 'ANKRD34C', 'DEFB113', 'DMP1', 'GKN2', 'SNAR-I', 'CD300LD', 'DDI1', 'SNAR-E', 'GPR22', 'BPIFB4', 'CTRB2', 'CPA2', 'ADGRD2', 'KRTAP1-5', 'XKR7', 'OR10G8', 'BPIFB3', 'PPP1R2P9', 'SNORA36A', 'FKBP6', 'VIL1', 'SLC36A3', 'PCDH8', 'FAM41AY1', 'ACSM2B', 'AADACL3', 'SNORD97', 'NEUROD6', 'LINC00520', 'MAGEA1', 'CHRNB3', 'OR2AG1', 'OR4D2', 'C12ORF50', 'PRAC1', 'SH2D7', 'OACYLP', 'DISC2', 'NXPE1', 'USP50', 'BHLHE23', 'MYH7', 'CALCB', 'LOC284798', 'DEFB110', 'RAPGEF4-AS1', 'AIRE', 'KGFLP1', 'RFX6', 'CPNE4', 'CNGB1', 'CETN1', 'C2ORF27B', 'SSX9', 'SLC5A8', 'C11ORF40', 'LOC400736', 'SLCO1B7', 'TNFSF18', 'KRTAP1-1', 'KRT71', 'PRMT8', 'POU4F1', 'DMRT1', 'FAM183CP', 'KCNK4', 'ASB15', 'SCEL', 'GLYATL3', 'NEUROG3', 'CA5A', 'SNORA27', 'OR2L2', 'XIRP2', 'UGT2B10', 'FAM47C', 'NF1P2', 'DEFB118', 'TRIM75P', 'LINC00029', 'KCNJ16', 'CACNG7', 'HTR1A', 'DSCR10', 'MIR1-1HG', 'OR2A14', 'CD1B', 'OR8D4', 'GAGE2B', 'SPATA3', 'CIB4', 'HYMAI', 'ARL14', 'PRL', 'LOC100132831', 'FMO9P', 'HGC6.3', 'BTF3P11', 'OR52N1', 'SNORA16B', 'CDH10', 'HRK', 'KRTAP11-1', 'LINC00479', 'OR10H2', 'SNORA58', 'C12ORF42', 'LINC00202-2', 'C6ORF10', 'ODF3', 'GFI1B', 'OR1L4', 'OVCH1', 'HSD52', 'POU4F2', 'HIST1H3A', 'FAM19A1', 'HOXC12', 'OR52N2', 'NPB', 'ADRB3', 'HIST2H2AB', 'HIST1H3F', 'RAET1L', 'SNORA2B', 'HCRTR2', 'SPOCK3', 'SCARNA1', 'GPR52', 'SLC39A12', 'ANKRD20A20P', 'XAGE3', 'HTR2C', 'IFNL1', 'GSC2', 'DEFB109P1', 'CLRN1-AS1', 'SPINT3', 'HPVC1', 'HHATL', 'CYP2A7', 'SLC2A2', 'OR2A12', 'HIST1H2BM', 'RNF222', 'IGFBP1', 'NEUROG1', 'CA4', 'TPSD1', 'SERPINB11', 'NKX6-2', 'OR5H2', 'AATK-AS1', 'KRT12', 'KLRC4', 'LINC00314', 'FOXG1', 'GABBR2', 'SNORA72', 'MYH16', 'LOC647859', 'OR51T1', 'CRYGC', 'OR5M1', 'FOXE3', 'GBA3', 'LINC00710', 'CRISP2', 'EXD1', 'F2', 'TRPM3', 'CLCA3P', 'SLC13A1', 'LOC285627', 'CGB2', 'MROH5', 'LINC00452', 'LINC00964', 'PLD5', 'LINC00691', 'KRTAP12-1', 'OR51L1', 'LOC400940', 'OR4N4', 'MYL1', 'TMEM207', 'FAM170A', 'SCGB3A2', 'PTCHD3', 'NYAP2', 'OR51A2', 'C5ORF47', 'FAM92A1P2', 'IGLL1', 'FRMPD2', 'HBM', 'POU4F3', 'POU6F2', 'PRSS48', 'TSHB', 'LINC01105', 'OR10AD1', 'FOXI3', 'SNORA68', 'STON1-GTF2A1L', 'S100A12', 'B3GALT1', 'TKTL2', 'C12ORF56', 'C1ORF146', 'MEP1A', 'OR3A2', 'MT1B', 'CACNG3', 'LOC100130417', 'ALAS2', 'DPP10', 'MAGEA11', 'SLC22A12', 'INS-IGF2', 'PRAMEF14', 'ART1', 'OR13C2', 'SSX8', 'CLEC18C', 'ZIC5', 'OR5A1', 'GH2', 'GPRC6A', 'MYH4', 'OR5E1P', 'OR52K2', 'OR13H1', 'MAGEB4', 'PAQR9', 'HIST1H3B', 'LOC391343', 'C11ORF87', 'CCL7', 'CWH43', 'PDX1', 'VSTM5', 'NHLH2', 'SPANXN2', 'HMHB1', 'PCSK2', 'FGF16', 'FAM9B', 'SNORA64', 'PAEP', 'FAM71E2', 'FEZF1', 'PATE3', 'FRG2DP', 'DACH2', 'DAPL1', 'LOC100130264', 'LOC100129055', 'MYADML', 'FEZF2', 'MMP21', 'ABCA13', 'TBATA', 'SNORA16A', 'HIST1H4B', 'CYP1A2', 'BRDT', 'LINC00608', 'OTC', 'IFNE', 'CASR', 'MAGEA12', 'GABRA3', 'SLITRK1', 'GABRB1', 'OR52A1', 'KLK12', 'IFNL2', 'TAS2R42', 'SPRR1B', 'C4ORF51', 'GJA10', 'OR12D3', 'GJB7', 'GPR61', 'MYL2', 'TBX20', 'OR2T2', 'KAAG1', 'SPRR2G', 'VAX1', 'ISL1', 'C17ORF78', 'GCKR', 'RNF151', 'LINC00652', 'KRT18P55', 'PLCZ1', 'OR7A5', 'KRTAP10-4', 'OR9K2', 'ADCYAP1R1', 'S100A7', 'ZG16', 'KRTAP4-5', 'FOXR1', 'KRT73', 'CST13P', 'OPRM1', 'SPINK14', 'FSHR', 'OR5K1', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999997868954927 Coefficient of Determination: 1.0 RMSE: 1.9931589614079874e-15 NRMSE: 5.378963967885281e-16 MAPE: 1.5089404991699623e-12 Pearson Correlation: 0.09275458818453458 Spearman Correlation: 0.08354306896888108 Coefficient of Determination: -1.11911173605746 RMSE: 0.7537345337255362 NRMSE: 0.2781729094532886 MAPE: 647.4643383414582 Predictor: ElasticNet Pearson Correlation: 0.8542146459040771 Spearman Correlation: 0.8271594206509442 Coefficient of Determination: 0.6730411764704363 RMSE: 0.2545284777936232 NRMSE: 0.06868993077629106 MAPE: 139.0958689002628 Pearson Correlation: 0.26086231560478795 Spearman Correlation: 0.2869232270022437 Coefficient of Determination: 0.047872909476771364 RMSE: 0.505229785801119 NRMSE: 0.1864598650722504 MAPE: 345.38929699503285 Predictor: RandomForests Pearson Correlation: 0.5862806162507487 Spearman Correlation: 0.5668929803478887 Coefficient of Determination: 0.3157943804812028 RMSE: 0.3681994772774492 NRMSE: 0.09936647099489382 MAPE: 200.8826457065184 Pearson Correlation: 0.42085924352689824 Spearman Correlation: 0.3897043312139805 Coefficient of Determination: 0.16808906652012257 RMSE: 0.4722586283785074 NRMSE: 0.17429154535501953 MAPE: 357.23674250299956 Fold: 3 Protein: RB1 x_train_column_count: 1053 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'LINC00200', 'OR52B4', 'OR4F15', 'OR8J3', 'HTR5A', 'DAZL', 'RAB9BP1', 'SNORA32', 'C10ORF53', 'KRTAP19-8', 'IFNA16', 'OR2L2', 'TGIF2LX', 'F13B', 'FAM71A', 'OR11L1', 'OR9A2', 'OR8B3', 'TXLNGY', 'ZCCHC13', 'HBG1', 'OR2M3', 'GUCA2B', 'CLEC6A', 'NXF2B', 'OR10V1', 'OR10A5', 'SNORA51', 'OTX2', 'GRIN2B', 'TMPRSS11F', 'WFDC5', 'IL31', 'OR8S1', 'FGF23', 'OR5H14', 'HMHB1', 'PSG7', 'C18ORF42', 'LINC00895', 'MS4A6E', 'PPY', 'GOLGA6D', 'SCGB1C1', 'NOX3', 'KRTAP10-12', 'OR1N1', 'ASB17', 'ADAM18', 'ITLN2', 'RPL13AP17', 'OR1S2', 'KRTAP10-11', 'VWC2L', 'OR2G2', 'OR8G5', 'TAAR9', 'BRDTP1', 'PLG', 'SSX5', 'LEUTX', 'OR4D9', 'PWAR4', 'CRYAA', 'MAGEA10', 'TTTY14', 'TPD52L3', 'HIST1H4F', 'LINC01205', 'GDNF', 'SNORA34', 'CAPZA3', 'POTED', 'GPR52', 'MMP23A', 'LINC00636', 'ARSF', 'TCP10L2', 'SNORD89', 'XAGE5', 'C2ORF83', 'KRTAP12-2', 'COL6A4P1', 'TSGA13', 'LOC391343', 'ALOX12B', 'BTNL3', 'LOC391003', 'CYP11B2', 'CFHR4', 'SNORA70B', 'SFTA3', 'FAM27B', 'FMR1NB', 'HBD', 'RSPH6A', 'OR5T2', 'ANKUB1', 'OR4S1', 'BPIFA3', 'TRIM51', 'CYP2W1', 'OR9G4', 'CASC8', 'OPN1MW', 'SLC38A8', 'SSX8', 'ACTR3BP2', 'PROKR1', 'FOXN3-AS2', 'ARR3', 'OR56A1', 'ACTRT2', 'INSM2', 'P2RX3', 'ARHGAP36', 'HNRNPCL1', 'TBC1D28', 'DMRT1', 'SDR16C6P', 'LINC00469', 'TAS2R60', 'STATH', 'KHDC1L', 'LINC00111', 'SLC13A1', 'ANKRD18DP', 'PF4', 'POTEH', 'C11ORF94', 'RESP18', 'EDDM3A', 'RTP2', 'DAOA', 'ASB18', 'C20ORF173', 'TKTL2', 'ADGRG7', 'OR4C16', 'DEFB126', 'DEFB129', 'GAGE1', 'OR4F5', 'ZIM3', 'IFITM5', 'OR6Y1', 'OR7A17', 'LINC00114', 'SPACA7', 'DUXA', 'OR6B3', 'DEFB104A', 'LHX9', 'SOX3', 'YWHAEP7', 'OR8H2', 'LGI3', 'FAM169B', 'PRAMEF20', 'CTRB1', 'LINC01566', 'KRTAP19-2', 'RGS8', 'MYBPHL', 'KRTAP6-1', 'KRTAP25-1', 'TRPV5', 'LINC00523', 'WFDC8', 'TCP10', 'GAGE2D', 'KCNQ1DN', 'TAS2R13', 'CPLX4', 'OR52H1', 'CLRN2', 'TMEM72', 'HSFY2', 'OR2T35', 'SFTPC', 'OR4K17', 'KRTAP13-1', 'SPANXA2', 'CCKAR', 'MYF5', 'TMEM202', 'GABRG3', 'AVPR1B', 'OR4K2', 'FCAMR', 'ASAP1-IT1', 'INS', 'CGB5', 'MMD2', 'CNTNAP4', 'LCNL1', 'FDCSP', 'KLK9', 'OLFM3', 'GH1', 'MAGEB6', 'CCDC166', 'LINC01101', 'SPDYC', 'MBD3L5', 'CRNN', 'LINC00113', 'CRLF2', 'NEU2', 'BEND2', 'HPD', 'OR8G2', 'OR14I1', 'SVOP', 'FAM71C', 'OLIG1', 'YIPF7', 'TPTE', 'IQCJ', 'OTOL1', 'IZUMO1R', 'LIPN', 'PRDM14', 'CYLC2', 'OR10H2', 'FAM27L', 'LRRTM1', 'OLAH', 'PRKAG3', 'HOXC12', 'PSG11', 'LOC285847', 'TARM1', 'DNTT', 'XAGE3', 'ALPPL2', 'FTMT', 'TCEB3C', 'FRMPD4', 'RHAG', 'SNORD115-26', 'GUCY2EP', 'KRTAP10-7', 'NANOS2', 'KRTAP10-1', 'SCN1A', 'KRT85', 'DEFB110', 'DAW1', 'OR4D6', 'LPO', 'BARHL2', 'OPRD1', 'DISC2', 'OR5H6', 'ABRA', 'OR5M10', 'IL17F', 'UGT2A3', 'C9ORF135', 'XKR7', 'PYDC2', 'UCMA', 'NKX1-2', 'LOC646813', 'OR1L1', 'TFF2', 'F11', 'OR6B2', 'SNORA59B', 'LCE1D', 'C20ORF166-AS1', 'PISRT1', 'TTTY15', 'C1ORF146', 'LCN9', 'TBC1D3P2', 'SNORA16B', 'FBXW12', 'MYBPC2', 'TMEM207', 'EPS8L3', 'SPATA19', 'SLC2A2', 'TTTY9B', 'TTTY8', 'ANXA8L1', 'SBSN', 'ADAM29', 'REG4', 'CHIAP2', 'ANP32D', 'GRK1', 'SPACA3', 'IGLL3P', 'CXADRP2', 'CETN1', 'IL26', 'CGB8', 'OR2M7', 'HBG2', 'FRMPD2B', 'CPLX3', 'OR4C12', 'ZNF679', 'SULT1C3', 'IVL', 'GUCY2F', 'GAGE2B', 'KRTAP21-1', 'SNORD94', 'PCGEM1', 'LMNTD1', 'MAGEA1', 'UGT1A5', 'DEFB134', 'CALR3', 'PSKH2', 'SNCB', 'FKBP6', 'PRAMEF1', 'MOGAT3', 'CYP7A1', 'POM121L2', 'CNGB1', 'GBX2', 'OR1E2', 'OR51I2', 'NYX', 'HAO1', 'LYZL1', 'OR51G2', 'NKX2-1', 'OR52E8', 'ZNF705A', 'OR5M8', 'LOC729609', 'OR6K6', 'GOLGA6L1', 'LINC00032', 'SATB2-AS1', 'ALX4', 'CCL24', 'FAM74A3', 'LINC00923', 'KCNK4', 'SNORA1', 'SNAR-F', 'SNORA84', 'TMEM88B', 'HTR3E', 'SLITRK3', 'SYCN', 'SLC25A31', 'KRTAP19-6', 'LINC00608', 'IFNA13', 'TSKS', 'SRY', 'TRHR', 'RPL3L', 'MAP3K15', 'BMP15', 'CRYGB', 'KGFLP1', 'ALLC', 'C10ORF120', 'DMRTB1', 'KRTAP2-1', 'NTS', 'INSC', 'DPPA2', 'RAX2', 'MUSK', 'CLRN1-AS1', 'TRIML1', 'TFAMP1', 'DKFZP434K028', 'FFAR1', 'KCNIP4-IT1', 'PROKR2', 'SLC6A5', 'NLRP13', 'POU6F2', 'FAM138D', 'LOC286238', 'OACYLP', 'CT47B1', 'OR1K1', 'GDPD2', 'DEFB123', 'ADGRD2', 'ANGPTL3', 'OR51F2', 'NKX2-3', 'KCNMB2', 'SLC36A3', 'CD200R1L', 'LCN1', 'MGC27382', 'MUC2', 'SPRR2E', 'LINC00520', 'MAGEA9B', 'GAGE12F', 'FOXD4L3', 'KIR3DL3', 'PTX4', 'AKR1C8P', 'CDRT15', 'GCSAML-AS1', 'LINC00575', 'IFNA7', 'LINC00479', 'HGC6.3', 'OR6A2', 'SLC10A1', 'CTRC', 'LINC00202-2', 'OR13C3', 'LINC01565', 'KRT25', 'ARL13A', 'KRTAP19-3', 'PAPOLB', 'MTVR2', 'SLC9C1', 'ADGRG4', 'IL36RN', 'LRRC30', 'KRTAP9-2', 'USP26', 'C12ORF50', 'KRT71', 'TRIM48', 'LHCGR', 'FAM71B', 'USP17L6P', 'BPIFB4', 'C6ORF10', 'OR7D4', 'LINC00303', 'USH1C', 'OCSTAMP', 'EDDM3B', 'CSN3', 'DAZ1', 'KRTAP10-6', 'OR2M4', 'DMRTC1', 'MAGEA6', 'ODF3', 'TNP1', 'AMER3', 'HULC', 'OR10W1', 'OR12D2', 'FOXR1', 'OR7G3', 'SLC17A6', 'PRB4', 'LINC01312', 'RPS4Y2', 'LINC00410', 'GUCA1C', 'KRTAP1-1', 'NKAIN3', 'NEUROD1', 'AQP2', 'XIRP2', 'CER1', 'SPOCK3', 'ACSM4', 'FAM170B', 'SPZ1', 'OR5M3', 'GKN2', 'KRTAP4-3', 'KRTAP1-5', 'FAM224B', 'ACSM2B', 'CRYGC', 'BTF3P11', 'OVCH1', 'BCYRN1', 'POTEG', 'BTN1A1', 'OR51B5', 'CHRNB3', 'GNAT3', 'FAM205A', 'LOC647859', 'HTR1A', 'PTH2', 'CALCB', 'SLC5A8', 'SLC5A7', 'OR1L4', 'LINC00304', 'TDH', 'HBE1', 'DMP1', 'MAGEB3', 'CNTN5', 'FAM19A1', 'OR2T10', 'FAM19A4', 'OR2AG1', 'FBXO47', 'HCRTR1', 'SHH', 'KCNG4', 'PRAC1', 'OR51M1', 'NLRP8', 'SHD', 'BPIFB3', 'SPANXN3', 'AHSG', 'OR13H1', 'SSX9', 'SERPINB12', 'LOC284798', 'LINC00671', 'NUTM1', 'KRT83', 'RFX6', 'SCTR', 'NCAN', 'LINC01142', 'OR7G2', 'AATK-AS1', 'H3F3AP5', 'SLC22A10', 'KRTAP11-1', 'FAM138B', 'C2ORF27B', 'GPHA2', 'DSCR10', 'CRISP2', 'UROC1', 'PPP1R2P9', 'DCT', 'PRL', 'POU4F2', 'HTR2C', 'NYAP2', 'SNORA76C', 'AVP', 'OR2G6', 'PTCHD3', 'AADACL3', 'TMEM14E', 'CLEC4G', 'HIST1H3A', 'PCP4', 'PPY2P', 'UGT1A4', 'GPR22', 'OR5H2', 'AIRE', 'KLRC4', 'OR2L8', 'AKR1D1', 'KCNJ16', 'TRIM75P', 'TRIM55', 'ARL14', 'CPA2', 'NF1P2', 'ISL1', 'ASB15', 'SPATA22', 'SPATA3', 'SSTR3', 'HIST2H2AB', 'OR2A14', 'LINC00207', 'IFNW1', 'SPATA45', 'CNGA2', 'POU4F3', 'SLC22A13', 'C16ORF90', 'GFI1B', 'APCS', 'C6ORF118', 'LOC145845', 'SNORA71B', 'SNORA62', 'PPAN-P2RY11', 'PCDH8', 'SNORA80E', 'FOXE3', 'NXPE1', 'UGT2B10', 'DEFB131', 'CACNG7', 'PRO0611', 'DEFB118', 'PCSK2', 'USP50', 'FAM170A', 'GNAS-AS1', 'LOC392196', 'ZFY', 'LOC400794', 'C1ORF140', 'CT47A6', 'MYH16', 'MIR1-1HG', 'C1ORF94', 'CGB2', 'CT47A7', 'MYL2', 'TMEM132D', 'CA4', 'MAGEA12', 'IGLL1', 'SLC4A9', 'LOC100132831', 'LRRC74A', 'OR10AD1', 'OR4D10', 'CALHM3', 'GH2', 'TDRG1', 'HPVC1', 'TMPRSS11B', 'HBM', 'SLC39A12', 'SLC22A12', 'IFNL1', 'RAPGEF4-AS1', 'ANKRD34C', 'ART1', 'GABRB1', 'OR2A12', 'DNAJC25-GNG10', 'LINC00710', 'ASB10', 'OR2A2', 'ZFAT-AS1', 'LINC00691', 'SH2D7', 'LINC01591', 'LINC00452', 'SCGB3A2', 'FAM47C', 'CSNK1A1P1', 'PRR32', 'SNORA72', 'GPR139', 'NEUROD6', 'KRTAP6-2', 'OR5B17', 'PDX1', 'ADRB3', 'GBA3', 'MTNR1A', 'GPR50', 'SPRR1B', 'MUC13', 'GPR61', 'KRTAP12-1', 'GSC2', 'GPRC6A', 'ANKRD20A20P', 'TRPM3', 'FERD3L', 'VIL1', 'CST9L', 'APOA5', 'NEUROG1', 'B4GALNT2', 'SNORA27', 'LHFPL4', 'C11ORF87', 'PRAMEF16', 'OR51L1', 'NKX6-2', 'SNORA2B', 'PRDM9', 'BANF2', 'PRSS1', 'PRSS57', 'OR51T1', 'VWA5B1', 'ZSCAN10', 'TKTL1', 'VSTM5', 'OTOP1', 'PRSS48', 'PAEP', 'SERPINB11', 'LINC00336', 'SPINK14', 'SNORA16A', 'RAET1L', 'SST', 'SSX2', 'CDHR5', 'NPSR1-AS1', 'C4ORF50', 'FOXG1', 'B3GALT1', 'TMEM252', 'PSAPL1', 'GOLGA2P6', 'PACRG-AS1', 'INS-IGF2', 'ZG16', 'MT1B', 'BET1P1', 'ITPK1-AS1', 'HYMAI', 'NHLH2', 'FAM71E2', 'FEZF1', 'OR52K2', 'NPY', 'MEP1A', 'OR2T2', 'SYT14P1', 'ADGRE3', 'OR3A2', 'SCARNA8', 'TRIM49', 'TRIM49D2', 'CLLU1', 'MAGEA11', 'OR2K2', 'BAGE', 'C9ORF171', 'NPSR1', 'CLEC4M', 'GJB4', 'ACTL7B', 'LINC00244', 'CPN1', 'OTC', 'CTRB2', 'FRMPD2', 'C1ORF158', 'SPINT3', 'GCGR', 'OR4D1', 'SNORA67', 'GCKR', 'C17ORF78', 'SNORA38', 'NPPC', 'MBL2', 'KLK13', 'KRTAP3-2', 'TAS2R42', 'CCER1', 'RNF222', 'SLCO1A2', 'DACH2', 'IFNL2', 'CACNG3', 'PASD1', 'LOC100130264', 'IL13', 'FER1L6', 'DMRTC2', 'CYP1A2', 'OPRM1', 'OR12D3', 'FAM9B', 'FRG2DP', 'CMTM5', 'TNP2', 'TP53TG5', 'LINC00964', 'CHRNA9', 'MAS1L', 'CCDC54', 'F2', 'C12ORF56', 'CLRN1', 'S100A12', 'OR5M1', 'CYP2A7', 'OR5K1', 'POU4F1', 'ATOH7', 'VCX3A', 'MYADML', 'SLITRK1', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.0692259140409971e-15 NRMSE: 3.910276163110727e-16 MAPE: 3.2500059982422124e-12 Pearson Correlation: 0.05514673587609342 Spearman Correlation: 0.009344256162795049 Coefficient of Determination: -1.8927588171999563 RMSE: 0.37701044129605776 NRMSE: 0.26454274057008975 MAPE: 936.5222395007531 Predictor: ElasticNet Pearson Correlation: 0.7446330693859966 Spearman Correlation: 0.6012221756472729 Coefficient of Determination: 0.47019512734507296 RMSE: 0.17511347324849658 NRMSE: 0.06404091327110027 MAPE: 320.1406502182185 Pearson Correlation: 0.267949221509162 Spearman Correlation: 0.27006571154253795 Coefficient of Determination: 0.038086307361578475 RMSE: 0.21740289279897188 NRMSE: 0.15254844632735862 MAPE: 283.06952611359185 Predictor: RandomForests Pearson Correlation: 0.5988725865879051 Spearman Correlation: 0.41460896505181505 Coefficient of Determination: 0.18855116622508483 RMSE: 0.2167165898020506 NRMSE: 0.07925562821900622 MAPE: 294.43809970624284 Pearson Correlation: 0.16887846497426284 Spearman Correlation: 0.1800273823174233 Coefficient of Determination: -0.011377361863412094 RMSE: 0.22292248689337799 NRMSE: 0.15642146518473832 MAPE: 226.30176159033115 Protein: CDH1 x_train_column_count: 1053 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'LINC00200', 'OR52B4', 'OR4F15', 'OR8J3', 'HTR5A', 'DAZL', 'RAB9BP1', 'SNORA32', 'C10ORF53', 'KRTAP19-8', 'IFNA16', 'OR2L2', 'TGIF2LX', 'F13B', 'FAM71A', 'OR11L1', 'OR9A2', 'OR8B3', 'TXLNGY', 'ZCCHC13', 'HBG1', 'OR2M3', 'GUCA2B', 'CLEC6A', 'NXF2B', 'OR10V1', 'OR10A5', 'SNORA51', 'OTX2', 'GRIN2B', 'TMPRSS11F', 'WFDC5', 'IL31', 'OR8S1', 'FGF23', 'OR5H14', 'HMHB1', 'PSG7', 'C18ORF42', 'LINC00895', 'MS4A6E', 'PPY', 'GOLGA6D', 'SCGB1C1', 'NOX3', 'KRTAP10-12', 'OR1N1', 'ASB17', 'ADAM18', 'ITLN2', 'RPL13AP17', 'OR1S2', 'KRTAP10-11', 'VWC2L', 'OR2G2', 'OR8G5', 'TAAR9', 'BRDTP1', 'PLG', 'SSX5', 'LEUTX', 'OR4D9', 'PWAR4', 'CRYAA', 'MAGEA10', 'TTTY14', 'TPD52L3', 'HIST1H4F', 'LINC01205', 'GDNF', 'SNORA34', 'CAPZA3', 'POTED', 'GPR52', 'MMP23A', 'LINC00636', 'ARSF', 'TCP10L2', 'SNORD89', 'XAGE5', 'C2ORF83', 'KRTAP12-2', 'COL6A4P1', 'TSGA13', 'LOC391343', 'ALOX12B', 'BTNL3', 'LOC391003', 'CYP11B2', 'CFHR4', 'SNORA70B', 'SFTA3', 'FAM27B', 'FMR1NB', 'HBD', 'RSPH6A', 'OR5T2', 'ANKUB1', 'OR4S1', 'BPIFA3', 'TRIM51', 'CYP2W1', 'OR9G4', 'CASC8', 'OPN1MW', 'SLC38A8', 'SSX8', 'ACTR3BP2', 'PROKR1', 'FOXN3-AS2', 'ARR3', 'OR56A1', 'ACTRT2', 'INSM2', 'P2RX3', 'ARHGAP36', 'HNRNPCL1', 'TBC1D28', 'DMRT1', 'SDR16C6P', 'LINC00469', 'TAS2R60', 'STATH', 'KHDC1L', 'LINC00111', 'SLC13A1', 'ANKRD18DP', 'PF4', 'POTEH', 'C11ORF94', 'RESP18', 'EDDM3A', 'RTP2', 'DAOA', 'ASB18', 'C20ORF173', 'TKTL2', 'ADGRG7', 'OR4C16', 'DEFB126', 'DEFB129', 'GAGE1', 'OR4F5', 'ZIM3', 'IFITM5', 'OR6Y1', 'OR7A17', 'LINC00114', 'SPACA7', 'DUXA', 'OR6B3', 'DEFB104A', 'LHX9', 'SOX3', 'YWHAEP7', 'OR8H2', 'LGI3', 'FAM169B', 'PRAMEF20', 'CTRB1', 'LINC01566', 'KRTAP19-2', 'RGS8', 'MYBPHL', 'KRTAP6-1', 'KRTAP25-1', 'TRPV5', 'LINC00523', 'WFDC8', 'TCP10', 'GAGE2D', 'KCNQ1DN', 'TAS2R13', 'CPLX4', 'OR52H1', 'CLRN2', 'TMEM72', 'HSFY2', 'OR2T35', 'SFTPC', 'OR4K17', 'KRTAP13-1', 'SPANXA2', 'CCKAR', 'MYF5', 'TMEM202', 'GABRG3', 'AVPR1B', 'OR4K2', 'FCAMR', 'ASAP1-IT1', 'INS', 'CGB5', 'MMD2', 'CNTNAP4', 'LCNL1', 'FDCSP', 'KLK9', 'OLFM3', 'GH1', 'MAGEB6', 'CCDC166', 'LINC01101', 'SPDYC', 'MBD3L5', 'CRNN', 'LINC00113', 'CRLF2', 'NEU2', 'BEND2', 'HPD', 'OR8G2', 'OR14I1', 'SVOP', 'FAM71C', 'OLIG1', 'YIPF7', 'TPTE', 'IQCJ', 'OTOL1', 'IZUMO1R', 'LIPN', 'PRDM14', 'CYLC2', 'OR10H2', 'FAM27L', 'LRRTM1', 'OLAH', 'PRKAG3', 'HOXC12', 'PSG11', 'LOC285847', 'TARM1', 'DNTT', 'XAGE3', 'ALPPL2', 'FTMT', 'TCEB3C', 'FRMPD4', 'RHAG', 'SNORD115-26', 'GUCY2EP', 'KRTAP10-7', 'NANOS2', 'KRTAP10-1', 'SCN1A', 'KRT85', 'DEFB110', 'DAW1', 'OR4D6', 'LPO', 'BARHL2', 'OPRD1', 'DISC2', 'OR5H6', 'ABRA', 'OR5M10', 'IL17F', 'UGT2A3', 'C9ORF135', 'XKR7', 'PYDC2', 'UCMA', 'NKX1-2', 'LOC646813', 'OR1L1', 'TFF2', 'F11', 'OR6B2', 'SNORA59B', 'LCE1D', 'C20ORF166-AS1', 'PISRT1', 'TTTY15', 'C1ORF146', 'LCN9', 'TBC1D3P2', 'SNORA16B', 'FBXW12', 'MYBPC2', 'TMEM207', 'EPS8L3', 'SPATA19', 'SLC2A2', 'TTTY9B', 'TTTY8', 'ANXA8L1', 'SBSN', 'ADAM29', 'REG4', 'CHIAP2', 'ANP32D', 'GRK1', 'SPACA3', 'IGLL3P', 'CXADRP2', 'CETN1', 'IL26', 'CGB8', 'OR2M7', 'HBG2', 'FRMPD2B', 'CPLX3', 'OR4C12', 'ZNF679', 'SULT1C3', 'IVL', 'GUCY2F', 'GAGE2B', 'KRTAP21-1', 'SNORD94', 'PCGEM1', 'LMNTD1', 'MAGEA1', 'UGT1A5', 'DEFB134', 'CALR3', 'PSKH2', 'SNCB', 'FKBP6', 'PRAMEF1', 'MOGAT3', 'CYP7A1', 'POM121L2', 'CNGB1', 'GBX2', 'OR1E2', 'OR51I2', 'NYX', 'HAO1', 'LYZL1', 'OR51G2', 'NKX2-1', 'OR52E8', 'ZNF705A', 'OR5M8', 'LOC729609', 'OR6K6', 'GOLGA6L1', 'LINC00032', 'SATB2-AS1', 'ALX4', 'CCL24', 'FAM74A3', 'LINC00923', 'KCNK4', 'SNORA1', 'SNAR-F', 'SNORA84', 'TMEM88B', 'HTR3E', 'SLITRK3', 'SYCN', 'SLC25A31', 'KRTAP19-6', 'LINC00608', 'IFNA13', 'TSKS', 'SRY', 'TRHR', 'RPL3L', 'MAP3K15', 'BMP15', 'CRYGB', 'KGFLP1', 'ALLC', 'C10ORF120', 'DMRTB1', 'KRTAP2-1', 'NTS', 'INSC', 'DPPA2', 'RAX2', 'MUSK', 'CLRN1-AS1', 'TRIML1', 'TFAMP1', 'DKFZP434K028', 'FFAR1', 'KCNIP4-IT1', 'PROKR2', 'SLC6A5', 'NLRP13', 'POU6F2', 'FAM138D', 'LOC286238', 'OACYLP', 'CT47B1', 'OR1K1', 'GDPD2', 'DEFB123', 'ADGRD2', 'ANGPTL3', 'OR51F2', 'NKX2-3', 'KCNMB2', 'SLC36A3', 'CD200R1L', 'LCN1', 'MGC27382', 'MUC2', 'SPRR2E', 'LINC00520', 'MAGEA9B', 'GAGE12F', 'FOXD4L3', 'KIR3DL3', 'PTX4', 'AKR1C8P', 'CDRT15', 'GCSAML-AS1', 'LINC00575', 'IFNA7', 'LINC00479', 'HGC6.3', 'OR6A2', 'SLC10A1', 'CTRC', 'LINC00202-2', 'OR13C3', 'LINC01565', 'KRT25', 'ARL13A', 'KRTAP19-3', 'PAPOLB', 'MTVR2', 'SLC9C1', 'ADGRG4', 'IL36RN', 'LRRC30', 'KRTAP9-2', 'USP26', 'C12ORF50', 'KRT71', 'TRIM48', 'LHCGR', 'FAM71B', 'USP17L6P', 'BPIFB4', 'C6ORF10', 'OR7D4', 'LINC00303', 'USH1C', 'OCSTAMP', 'EDDM3B', 'CSN3', 'DAZ1', 'KRTAP10-6', 'OR2M4', 'DMRTC1', 'MAGEA6', 'ODF3', 'TNP1', 'AMER3', 'HULC', 'OR10W1', 'OR12D2', 'FOXR1', 'OR7G3', 'SLC17A6', 'PRB4', 'LINC01312', 'RPS4Y2', 'LINC00410', 'GUCA1C', 'KRTAP1-1', 'NKAIN3', 'NEUROD1', 'AQP2', 'XIRP2', 'CER1', 'SPOCK3', 'ACSM4', 'FAM170B', 'SPZ1', 'OR5M3', 'GKN2', 'KRTAP4-3', 'KRTAP1-5', 'FAM224B', 'ACSM2B', 'CRYGC', 'BTF3P11', 'OVCH1', 'BCYRN1', 'POTEG', 'BTN1A1', 'OR51B5', 'CHRNB3', 'GNAT3', 'FAM205A', 'LOC647859', 'HTR1A', 'PTH2', 'CALCB', 'SLC5A8', 'SLC5A7', 'OR1L4', 'LINC00304', 'TDH', 'HBE1', 'DMP1', 'MAGEB3', 'CNTN5', 'FAM19A1', 'OR2T10', 'FAM19A4', 'OR2AG1', 'FBXO47', 'HCRTR1', 'SHH', 'KCNG4', 'PRAC1', 'OR51M1', 'NLRP8', 'SHD', 'BPIFB3', 'SPANXN3', 'AHSG', 'OR13H1', 'SSX9', 'SERPINB12', 'LOC284798', 'LINC00671', 'NUTM1', 'KRT83', 'RFX6', 'SCTR', 'NCAN', 'LINC01142', 'OR7G2', 'AATK-AS1', 'H3F3AP5', 'SLC22A10', 'KRTAP11-1', 'FAM138B', 'C2ORF27B', 'GPHA2', 'DSCR10', 'CRISP2', 'UROC1', 'PPP1R2P9', 'DCT', 'PRL', 'POU4F2', 'HTR2C', 'NYAP2', 'SNORA76C', 'AVP', 'OR2G6', 'PTCHD3', 'AADACL3', 'TMEM14E', 'CLEC4G', 'HIST1H3A', 'PCP4', 'PPY2P', 'UGT1A4', 'GPR22', 'OR5H2', 'AIRE', 'KLRC4', 'OR2L8', 'AKR1D1', 'KCNJ16', 'TRIM75P', 'TRIM55', 'ARL14', 'CPA2', 'NF1P2', 'ISL1', 'ASB15', 'SPATA22', 'SPATA3', 'SSTR3', 'HIST2H2AB', 'OR2A14', 'LINC00207', 'IFNW1', 'SPATA45', 'CNGA2', 'POU4F3', 'SLC22A13', 'C16ORF90', 'GFI1B', 'APCS', 'C6ORF118', 'LOC145845', 'SNORA71B', 'SNORA62', 'PPAN-P2RY11', 'PCDH8', 'SNORA80E', 'FOXE3', 'NXPE1', 'UGT2B10', 'DEFB131', 'CACNG7', 'PRO0611', 'DEFB118', 'PCSK2', 'USP50', 'FAM170A', 'GNAS-AS1', 'LOC392196', 'ZFY', 'LOC400794', 'C1ORF140', 'CT47A6', 'MYH16', 'MIR1-1HG', 'C1ORF94', 'CGB2', 'CT47A7', 'MYL2', 'TMEM132D', 'CA4', 'MAGEA12', 'IGLL1', 'SLC4A9', 'LOC100132831', 'LRRC74A', 'OR10AD1', 'OR4D10', 'CALHM3', 'GH2', 'TDRG1', 'HPVC1', 'TMPRSS11B', 'HBM', 'SLC39A12', 'SLC22A12', 'IFNL1', 'RAPGEF4-AS1', 'ANKRD34C', 'ART1', 'GABRB1', 'OR2A12', 'DNAJC25-GNG10', 'LINC00710', 'ASB10', 'OR2A2', 'ZFAT-AS1', 'LINC00691', 'SH2D7', 'LINC01591', 'LINC00452', 'SCGB3A2', 'FAM47C', 'CSNK1A1P1', 'PRR32', 'SNORA72', 'GPR139', 'NEUROD6', 'KRTAP6-2', 'OR5B17', 'PDX1', 'ADRB3', 'GBA3', 'MTNR1A', 'GPR50', 'SPRR1B', 'MUC13', 'GPR61', 'KRTAP12-1', 'GSC2', 'GPRC6A', 'ANKRD20A20P', 'TRPM3', 'FERD3L', 'VIL1', 'CST9L', 'APOA5', 'NEUROG1', 'B4GALNT2', 'SNORA27', 'LHFPL4', 'C11ORF87', 'PRAMEF16', 'OR51L1', 'NKX6-2', 'SNORA2B', 'PRDM9', 'BANF2', 'PRSS1', 'PRSS57', 'OR51T1', 'VWA5B1', 'ZSCAN10', 'TKTL1', 'VSTM5', 'OTOP1', 'PRSS48', 'PAEP', 'SERPINB11', 'LINC00336', 'SPINK14', 'SNORA16A', 'RAET1L', 'SST', 'SSX2', 'CDHR5', 'NPSR1-AS1', 'C4ORF50', 'FOXG1', 'B3GALT1', 'TMEM252', 'PSAPL1', 'GOLGA2P6', 'PACRG-AS1', 'INS-IGF2', 'ZG16', 'MT1B', 'BET1P1', 'ITPK1-AS1', 'HYMAI', 'NHLH2', 'FAM71E2', 'FEZF1', 'OR52K2', 'NPY', 'MEP1A', 'OR2T2', 'SYT14P1', 'ADGRE3', 'OR3A2', 'SCARNA8', 'TRIM49', 'TRIM49D2', 'CLLU1', 'MAGEA11', 'OR2K2', 'BAGE', 'C9ORF171', 'NPSR1', 'CLEC4M', 'GJB4', 'ACTL7B', 'LINC00244', 'CPN1', 'OTC', 'CTRB2', 'FRMPD2', 'C1ORF158', 'SPINT3', 'GCGR', 'OR4D1', 'SNORA67', 'GCKR', 'C17ORF78', 'SNORA38', 'NPPC', 'MBL2', 'KLK13', 'KRTAP3-2', 'TAS2R42', 'CCER1', 'RNF222', 'SLCO1A2', 'DACH2', 'IFNL2', 'CACNG3', 'PASD1', 'LOC100130264', 'IL13', 'FER1L6', 'DMRTC2', 'CYP1A2', 'OPRM1', 'OR12D3', 'FAM9B', 'FRG2DP', 'CMTM5', 'TNP2', 'TP53TG5', 'LINC00964', 'CHRNA9', 'MAS1L', 'CCDC54', 'F2', 'C12ORF56', 'CLRN1', 'S100A12', 'OR5M1', 'CYP2A7', 'OR5K1', 'POU4F1', 'ATOH7', 'VCX3A', 'MYADML', 'SLITRK1', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.592562411419792e-15 NRMSE: 7.312764579821967e-16 MAPE: 2.9146615037294642e-12 Pearson Correlation: 0.33726602502717445 Spearman Correlation: 0.3787304081098269 Coefficient of Determination: -2.5731511048844475 RMSE: 1.7797721605717782 NRMSE: 0.3498942634710373 MAPE: 625.5301663548526 Predictor: ElasticNet Pearson Correlation: 0.9265978503247061 Spearman Correlation: 0.9081549619589179 Coefficient of Determination: 0.8365413275834455 RMSE: 0.47493487664511386 NRMSE: 0.07562416430131426 MAPE: 199.40717230779515 Pearson Correlation: 0.3573509190376296 Spearman Correlation: 0.31241536677514686 Coefficient of Determination: -0.03421043457384698 RMSE: 0.9575096852833929 NRMSE: 0.18824159267160637 MAPE: 275.6212439209225 Predictor: RandomForests Pearson Correlation: 0.753004728753555 Spearman Correlation: 0.6846457466559809 Coefficient of Determination: 0.5626189212884961 RMSE: 0.7768909725625069 NRMSE: 0.12370481394899953 MAPE: 177.66271776688887 Pearson Correlation: 0.7334067753670961 Spearman Correlation: 0.5145794133856127 Coefficient of Determination: 0.532315149210286 RMSE: 0.6438954692743236 NRMSE: 0.1265866137054857 MAPE: 142.42001114010202 Protein: CDH2 x_train_column_count: 1053 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'LINC00200', 'OR52B4', 'OR4F15', 'OR8J3', 'HTR5A', 'DAZL', 'RAB9BP1', 'SNORA32', 'C10ORF53', 'KRTAP19-8', 'IFNA16', 'OR2L2', 'TGIF2LX', 'F13B', 'FAM71A', 'OR11L1', 'OR9A2', 'OR8B3', 'TXLNGY', 'ZCCHC13', 'HBG1', 'OR2M3', 'GUCA2B', 'CLEC6A', 'NXF2B', 'OR10V1', 'OR10A5', 'SNORA51', 'OTX2', 'GRIN2B', 'TMPRSS11F', 'WFDC5', 'IL31', 'OR8S1', 'FGF23', 'OR5H14', 'HMHB1', 'PSG7', 'C18ORF42', 'LINC00895', 'MS4A6E', 'PPY', 'GOLGA6D', 'SCGB1C1', 'NOX3', 'KRTAP10-12', 'OR1N1', 'ASB17', 'ADAM18', 'ITLN2', 'RPL13AP17', 'OR1S2', 'KRTAP10-11', 'VWC2L', 'OR2G2', 'OR8G5', 'TAAR9', 'BRDTP1', 'PLG', 'SSX5', 'LEUTX', 'OR4D9', 'PWAR4', 'CRYAA', 'MAGEA10', 'TTTY14', 'TPD52L3', 'HIST1H4F', 'LINC01205', 'GDNF', 'SNORA34', 'CAPZA3', 'POTED', 'GPR52', 'MMP23A', 'LINC00636', 'ARSF', 'TCP10L2', 'SNORD89', 'XAGE5', 'C2ORF83', 'KRTAP12-2', 'COL6A4P1', 'TSGA13', 'LOC391343', 'ALOX12B', 'BTNL3', 'LOC391003', 'CYP11B2', 'CFHR4', 'SNORA70B', 'SFTA3', 'FAM27B', 'FMR1NB', 'HBD', 'RSPH6A', 'OR5T2', 'ANKUB1', 'OR4S1', 'BPIFA3', 'TRIM51', 'CYP2W1', 'OR9G4', 'CASC8', 'OPN1MW', 'SLC38A8', 'SSX8', 'ACTR3BP2', 'PROKR1', 'FOXN3-AS2', 'ARR3', 'OR56A1', 'ACTRT2', 'INSM2', 'P2RX3', 'ARHGAP36', 'HNRNPCL1', 'TBC1D28', 'DMRT1', 'SDR16C6P', 'LINC00469', 'TAS2R60', 'STATH', 'KHDC1L', 'LINC00111', 'SLC13A1', 'ANKRD18DP', 'PF4', 'POTEH', 'C11ORF94', 'RESP18', 'EDDM3A', 'RTP2', 'DAOA', 'ASB18', 'C20ORF173', 'TKTL2', 'ADGRG7', 'OR4C16', 'DEFB126', 'DEFB129', 'GAGE1', 'OR4F5', 'ZIM3', 'IFITM5', 'OR6Y1', 'OR7A17', 'LINC00114', 'SPACA7', 'DUXA', 'OR6B3', 'DEFB104A', 'LHX9', 'SOX3', 'YWHAEP7', 'OR8H2', 'LGI3', 'FAM169B', 'PRAMEF20', 'CTRB1', 'LINC01566', 'KRTAP19-2', 'RGS8', 'MYBPHL', 'KRTAP6-1', 'KRTAP25-1', 'TRPV5', 'LINC00523', 'WFDC8', 'TCP10', 'GAGE2D', 'KCNQ1DN', 'TAS2R13', 'CPLX4', 'OR52H1', 'CLRN2', 'TMEM72', 'HSFY2', 'OR2T35', 'SFTPC', 'OR4K17', 'KRTAP13-1', 'SPANXA2', 'CCKAR', 'MYF5', 'TMEM202', 'GABRG3', 'AVPR1B', 'OR4K2', 'FCAMR', 'ASAP1-IT1', 'INS', 'CGB5', 'MMD2', 'CNTNAP4', 'LCNL1', 'FDCSP', 'KLK9', 'OLFM3', 'GH1', 'MAGEB6', 'CCDC166', 'LINC01101', 'SPDYC', 'MBD3L5', 'CRNN', 'LINC00113', 'CRLF2', 'NEU2', 'BEND2', 'HPD', 'OR8G2', 'OR14I1', 'SVOP', 'FAM71C', 'OLIG1', 'YIPF7', 'TPTE', 'IQCJ', 'OTOL1', 'IZUMO1R', 'LIPN', 'PRDM14', 'CYLC2', 'OR10H2', 'FAM27L', 'LRRTM1', 'OLAH', 'PRKAG3', 'HOXC12', 'PSG11', 'LOC285847', 'TARM1', 'DNTT', 'XAGE3', 'ALPPL2', 'FTMT', 'TCEB3C', 'FRMPD4', 'RHAG', 'SNORD115-26', 'GUCY2EP', 'KRTAP10-7', 'NANOS2', 'KRTAP10-1', 'SCN1A', 'KRT85', 'DEFB110', 'DAW1', 'OR4D6', 'LPO', 'BARHL2', 'OPRD1', 'DISC2', 'OR5H6', 'ABRA', 'OR5M10', 'IL17F', 'UGT2A3', 'C9ORF135', 'XKR7', 'PYDC2', 'UCMA', 'NKX1-2', 'LOC646813', 'OR1L1', 'TFF2', 'F11', 'OR6B2', 'SNORA59B', 'LCE1D', 'C20ORF166-AS1', 'PISRT1', 'TTTY15', 'C1ORF146', 'LCN9', 'TBC1D3P2', 'SNORA16B', 'FBXW12', 'MYBPC2', 'TMEM207', 'EPS8L3', 'SPATA19', 'SLC2A2', 'TTTY9B', 'TTTY8', 'ANXA8L1', 'SBSN', 'ADAM29', 'REG4', 'CHIAP2', 'ANP32D', 'GRK1', 'SPACA3', 'IGLL3P', 'CXADRP2', 'CETN1', 'IL26', 'CGB8', 'OR2M7', 'HBG2', 'FRMPD2B', 'CPLX3', 'OR4C12', 'ZNF679', 'SULT1C3', 'IVL', 'GUCY2F', 'GAGE2B', 'KRTAP21-1', 'SNORD94', 'PCGEM1', 'LMNTD1', 'MAGEA1', 'UGT1A5', 'DEFB134', 'CALR3', 'PSKH2', 'SNCB', 'FKBP6', 'PRAMEF1', 'MOGAT3', 'CYP7A1', 'POM121L2', 'CNGB1', 'GBX2', 'OR1E2', 'OR51I2', 'NYX', 'HAO1', 'LYZL1', 'OR51G2', 'NKX2-1', 'OR52E8', 'ZNF705A', 'OR5M8', 'LOC729609', 'OR6K6', 'GOLGA6L1', 'LINC00032', 'SATB2-AS1', 'ALX4', 'CCL24', 'FAM74A3', 'LINC00923', 'KCNK4', 'SNORA1', 'SNAR-F', 'SNORA84', 'TMEM88B', 'HTR3E', 'SLITRK3', 'SYCN', 'SLC25A31', 'KRTAP19-6', 'LINC00608', 'IFNA13', 'TSKS', 'SRY', 'TRHR', 'RPL3L', 'MAP3K15', 'BMP15', 'CRYGB', 'KGFLP1', 'ALLC', 'C10ORF120', 'DMRTB1', 'KRTAP2-1', 'NTS', 'INSC', 'DPPA2', 'RAX2', 'MUSK', 'CLRN1-AS1', 'TRIML1', 'TFAMP1', 'DKFZP434K028', 'FFAR1', 'KCNIP4-IT1', 'PROKR2', 'SLC6A5', 'NLRP13', 'POU6F2', 'FAM138D', 'LOC286238', 'OACYLP', 'CT47B1', 'OR1K1', 'GDPD2', 'DEFB123', 'ADGRD2', 'ANGPTL3', 'OR51F2', 'NKX2-3', 'KCNMB2', 'SLC36A3', 'CD200R1L', 'LCN1', 'MGC27382', 'MUC2', 'SPRR2E', 'LINC00520', 'MAGEA9B', 'GAGE12F', 'FOXD4L3', 'KIR3DL3', 'PTX4', 'AKR1C8P', 'CDRT15', 'GCSAML-AS1', 'LINC00575', 'IFNA7', 'LINC00479', 'HGC6.3', 'OR6A2', 'SLC10A1', 'CTRC', 'LINC00202-2', 'OR13C3', 'LINC01565', 'KRT25', 'ARL13A', 'KRTAP19-3', 'PAPOLB', 'MTVR2', 'SLC9C1', 'ADGRG4', 'IL36RN', 'LRRC30', 'KRTAP9-2', 'USP26', 'C12ORF50', 'KRT71', 'TRIM48', 'LHCGR', 'FAM71B', 'USP17L6P', 'BPIFB4', 'C6ORF10', 'OR7D4', 'LINC00303', 'USH1C', 'OCSTAMP', 'EDDM3B', 'CSN3', 'DAZ1', 'KRTAP10-6', 'OR2M4', 'DMRTC1', 'MAGEA6', 'ODF3', 'TNP1', 'AMER3', 'HULC', 'OR10W1', 'OR12D2', 'FOXR1', 'OR7G3', 'SLC17A6', 'PRB4', 'LINC01312', 'RPS4Y2', 'LINC00410', 'GUCA1C', 'KRTAP1-1', 'NKAIN3', 'NEUROD1', 'AQP2', 'XIRP2', 'CER1', 'SPOCK3', 'ACSM4', 'FAM170B', 'SPZ1', 'OR5M3', 'GKN2', 'KRTAP4-3', 'KRTAP1-5', 'FAM224B', 'ACSM2B', 'CRYGC', 'BTF3P11', 'OVCH1', 'BCYRN1', 'POTEG', 'BTN1A1', 'OR51B5', 'CHRNB3', 'GNAT3', 'FAM205A', 'LOC647859', 'HTR1A', 'PTH2', 'CALCB', 'SLC5A8', 'SLC5A7', 'OR1L4', 'LINC00304', 'TDH', 'HBE1', 'DMP1', 'MAGEB3', 'CNTN5', 'FAM19A1', 'OR2T10', 'FAM19A4', 'OR2AG1', 'FBXO47', 'HCRTR1', 'SHH', 'KCNG4', 'PRAC1', 'OR51M1', 'NLRP8', 'SHD', 'BPIFB3', 'SPANXN3', 'AHSG', 'OR13H1', 'SSX9', 'SERPINB12', 'LOC284798', 'LINC00671', 'NUTM1', 'KRT83', 'RFX6', 'SCTR', 'NCAN', 'LINC01142', 'OR7G2', 'AATK-AS1', 'H3F3AP5', 'SLC22A10', 'KRTAP11-1', 'FAM138B', 'C2ORF27B', 'GPHA2', 'DSCR10', 'CRISP2', 'UROC1', 'PPP1R2P9', 'DCT', 'PRL', 'POU4F2', 'HTR2C', 'NYAP2', 'SNORA76C', 'AVP', 'OR2G6', 'PTCHD3', 'AADACL3', 'TMEM14E', 'CLEC4G', 'HIST1H3A', 'PCP4', 'PPY2P', 'UGT1A4', 'GPR22', 'OR5H2', 'AIRE', 'KLRC4', 'OR2L8', 'AKR1D1', 'KCNJ16', 'TRIM75P', 'TRIM55', 'ARL14', 'CPA2', 'NF1P2', 'ISL1', 'ASB15', 'SPATA22', 'SPATA3', 'SSTR3', 'HIST2H2AB', 'OR2A14', 'LINC00207', 'IFNW1', 'SPATA45', 'CNGA2', 'POU4F3', 'SLC22A13', 'C16ORF90', 'GFI1B', 'APCS', 'C6ORF118', 'LOC145845', 'SNORA71B', 'SNORA62', 'PPAN-P2RY11', 'PCDH8', 'SNORA80E', 'FOXE3', 'NXPE1', 'UGT2B10', 'DEFB131', 'CACNG7', 'PRO0611', 'DEFB118', 'PCSK2', 'USP50', 'FAM170A', 'GNAS-AS1', 'LOC392196', 'ZFY', 'LOC400794', 'C1ORF140', 'CT47A6', 'MYH16', 'MIR1-1HG', 'C1ORF94', 'CGB2', 'CT47A7', 'MYL2', 'TMEM132D', 'CA4', 'MAGEA12', 'IGLL1', 'SLC4A9', 'LOC100132831', 'LRRC74A', 'OR10AD1', 'OR4D10', 'CALHM3', 'GH2', 'TDRG1', 'HPVC1', 'TMPRSS11B', 'HBM', 'SLC39A12', 'SLC22A12', 'IFNL1', 'RAPGEF4-AS1', 'ANKRD34C', 'ART1', 'GABRB1', 'OR2A12', 'DNAJC25-GNG10', 'LINC00710', 'ASB10', 'OR2A2', 'ZFAT-AS1', 'LINC00691', 'SH2D7', 'LINC01591', 'LINC00452', 'SCGB3A2', 'FAM47C', 'CSNK1A1P1', 'PRR32', 'SNORA72', 'GPR139', 'NEUROD6', 'KRTAP6-2', 'OR5B17', 'PDX1', 'ADRB3', 'GBA3', 'MTNR1A', 'GPR50', 'SPRR1B', 'MUC13', 'GPR61', 'KRTAP12-1', 'GSC2', 'GPRC6A', 'ANKRD20A20P', 'TRPM3', 'FERD3L', 'VIL1', 'CST9L', 'APOA5', 'NEUROG1', 'B4GALNT2', 'SNORA27', 'LHFPL4', 'C11ORF87', 'PRAMEF16', 'OR51L1', 'NKX6-2', 'SNORA2B', 'PRDM9', 'BANF2', 'PRSS1', 'PRSS57', 'OR51T1', 'VWA5B1', 'ZSCAN10', 'TKTL1', 'VSTM5', 'OTOP1', 'PRSS48', 'PAEP', 'SERPINB11', 'LINC00336', 'SPINK14', 'SNORA16A', 'RAET1L', 'SST', 'SSX2', 'CDHR5', 'NPSR1-AS1', 'C4ORF50', 'FOXG1', 'B3GALT1', 'TMEM252', 'PSAPL1', 'GOLGA2P6', 'PACRG-AS1', 'INS-IGF2', 'ZG16', 'MT1B', 'BET1P1', 'ITPK1-AS1', 'HYMAI', 'NHLH2', 'FAM71E2', 'FEZF1', 'OR52K2', 'NPY', 'MEP1A', 'OR2T2', 'SYT14P1', 'ADGRE3', 'OR3A2', 'SCARNA8', 'TRIM49', 'TRIM49D2', 'CLLU1', 'MAGEA11', 'OR2K2', 'BAGE', 'C9ORF171', 'NPSR1', 'CLEC4M', 'GJB4', 'ACTL7B', 'LINC00244', 'CPN1', 'OTC', 'CTRB2', 'FRMPD2', 'C1ORF158', 'SPINT3', 'GCGR', 'OR4D1', 'SNORA67', 'GCKR', 'C17ORF78', 'SNORA38', 'NPPC', 'MBL2', 'KLK13', 'KRTAP3-2', 'TAS2R42', 'CCER1', 'RNF222', 'SLCO1A2', 'DACH2', 'IFNL2', 'CACNG3', 'PASD1', 'LOC100130264', 'IL13', 'FER1L6', 'DMRTC2', 'CYP1A2', 'OPRM1', 'OR12D3', 'FAM9B', 'FRG2DP', 'CMTM5', 'TNP2', 'TP53TG5', 'LINC00964', 'CHRNA9', 'MAS1L', 'CCDC54', 'F2', 'C12ORF56', 'CLRN1', 'S100A12', 'OR5M1', 'CYP2A7', 'OR5K1', 'POU4F1', 'ATOH7', 'VCX3A', 'MYADML', 'SLITRK1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 1.5218509371093558e-15 NRMSE: 5.514352261429654e-16 MAPE: 1.003643232714362e-11 Pearson Correlation: -0.035922323852145735 Spearman Correlation: -0.05893090936295964 Coefficient of Determination: -1.8746514963163778 RMSE: 0.5628627112985678 NRMSE: 0.29657444690842827 MAPE: 753.6254454885527 Predictor: ElasticNet Pearson Correlation: 0.8476660670078278 Spearman Correlation: 0.8156146318931469 Coefficient of Determination: 0.6452046878997131 RMSE: 0.22708323949096637 NRMSE: 0.08228249854734633 MAPE: 271.1475219908942 Pearson Correlation: -0.023410772207736526 Spearman Correlation: -0.007453958278781531 Coefficient of Determination: -0.15601675778135737 RMSE: 0.35693730692041925 NRMSE: 0.1880715887834949 MAPE: 2051.186702892292 Predictor: RandomForests Pearson Correlation: 0.5826198321265411 Spearman Correlation: 0.5300044063611274 Coefficient of Determination: 0.18241125299148986 RMSE: 0.34471771104265 NRMSE: 0.12490677260767084 MAPE: 177.69279559370307 Pearson Correlation: -0.06844060489232887 Spearman Correlation: 0.026586366413546305 Coefficient of Determination: -0.04038344182118614 RMSE: 0.33861531257459593 NRMSE: 0.17841766211488397 MAPE: 1133.5362896720765 Protein: CDH3 x_train_column_count: 1053 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'LINC00200', 'OR52B4', 'OR4F15', 'OR8J3', 'HTR5A', 'DAZL', 'RAB9BP1', 'SNORA32', 'C10ORF53', 'KRTAP19-8', 'IFNA16', 'OR2L2', 'TGIF2LX', 'F13B', 'FAM71A', 'OR11L1', 'OR9A2', 'OR8B3', 'TXLNGY', 'ZCCHC13', 'HBG1', 'OR2M3', 'GUCA2B', 'CLEC6A', 'NXF2B', 'OR10V1', 'OR10A5', 'SNORA51', 'OTX2', 'GRIN2B', 'TMPRSS11F', 'WFDC5', 'IL31', 'OR8S1', 'FGF23', 'OR5H14', 'HMHB1', 'PSG7', 'C18ORF42', 'LINC00895', 'MS4A6E', 'PPY', 'GOLGA6D', 'SCGB1C1', 'NOX3', 'KRTAP10-12', 'OR1N1', 'ASB17', 'ADAM18', 'ITLN2', 'RPL13AP17', 'OR1S2', 'KRTAP10-11', 'VWC2L', 'OR2G2', 'OR8G5', 'TAAR9', 'BRDTP1', 'PLG', 'SSX5', 'LEUTX', 'OR4D9', 'PWAR4', 'CRYAA', 'MAGEA10', 'TTTY14', 'TPD52L3', 'HIST1H4F', 'LINC01205', 'GDNF', 'SNORA34', 'CAPZA3', 'POTED', 'GPR52', 'MMP23A', 'LINC00636', 'ARSF', 'TCP10L2', 'SNORD89', 'XAGE5', 'C2ORF83', 'KRTAP12-2', 'COL6A4P1', 'TSGA13', 'LOC391343', 'ALOX12B', 'BTNL3', 'LOC391003', 'CYP11B2', 'CFHR4', 'SNORA70B', 'SFTA3', 'FAM27B', 'FMR1NB', 'HBD', 'RSPH6A', 'OR5T2', 'ANKUB1', 'OR4S1', 'BPIFA3', 'TRIM51', 'CYP2W1', 'OR9G4', 'CASC8', 'OPN1MW', 'SLC38A8', 'SSX8', 'ACTR3BP2', 'PROKR1', 'FOXN3-AS2', 'ARR3', 'OR56A1', 'ACTRT2', 'INSM2', 'P2RX3', 'ARHGAP36', 'HNRNPCL1', 'TBC1D28', 'DMRT1', 'SDR16C6P', 'LINC00469', 'TAS2R60', 'STATH', 'KHDC1L', 'LINC00111', 'SLC13A1', 'ANKRD18DP', 'PF4', 'POTEH', 'C11ORF94', 'RESP18', 'EDDM3A', 'RTP2', 'DAOA', 'ASB18', 'C20ORF173', 'TKTL2', 'ADGRG7', 'OR4C16', 'DEFB126', 'DEFB129', 'GAGE1', 'OR4F5', 'ZIM3', 'IFITM5', 'OR6Y1', 'OR7A17', 'LINC00114', 'SPACA7', 'DUXA', 'OR6B3', 'DEFB104A', 'LHX9', 'SOX3', 'YWHAEP7', 'OR8H2', 'LGI3', 'FAM169B', 'PRAMEF20', 'CTRB1', 'LINC01566', 'KRTAP19-2', 'RGS8', 'MYBPHL', 'KRTAP6-1', 'KRTAP25-1', 'TRPV5', 'LINC00523', 'WFDC8', 'TCP10', 'GAGE2D', 'KCNQ1DN', 'TAS2R13', 'CPLX4', 'OR52H1', 'CLRN2', 'TMEM72', 'HSFY2', 'OR2T35', 'SFTPC', 'OR4K17', 'KRTAP13-1', 'SPANXA2', 'CCKAR', 'MYF5', 'TMEM202', 'GABRG3', 'AVPR1B', 'OR4K2', 'FCAMR', 'ASAP1-IT1', 'INS', 'CGB5', 'MMD2', 'CNTNAP4', 'LCNL1', 'FDCSP', 'KLK9', 'OLFM3', 'GH1', 'MAGEB6', 'CCDC166', 'LINC01101', 'SPDYC', 'MBD3L5', 'CRNN', 'LINC00113', 'CRLF2', 'NEU2', 'BEND2', 'HPD', 'OR8G2', 'OR14I1', 'SVOP', 'FAM71C', 'OLIG1', 'YIPF7', 'TPTE', 'IQCJ', 'OTOL1', 'IZUMO1R', 'LIPN', 'PRDM14', 'CYLC2', 'OR10H2', 'FAM27L', 'LRRTM1', 'OLAH', 'PRKAG3', 'HOXC12', 'PSG11', 'LOC285847', 'TARM1', 'DNTT', 'XAGE3', 'ALPPL2', 'FTMT', 'TCEB3C', 'FRMPD4', 'RHAG', 'SNORD115-26', 'GUCY2EP', 'KRTAP10-7', 'NANOS2', 'KRTAP10-1', 'SCN1A', 'KRT85', 'DEFB110', 'DAW1', 'OR4D6', 'LPO', 'BARHL2', 'OPRD1', 'DISC2', 'OR5H6', 'ABRA', 'OR5M10', 'IL17F', 'UGT2A3', 'C9ORF135', 'XKR7', 'PYDC2', 'UCMA', 'NKX1-2', 'LOC646813', 'OR1L1', 'TFF2', 'F11', 'OR6B2', 'SNORA59B', 'LCE1D', 'C20ORF166-AS1', 'PISRT1', 'TTTY15', 'C1ORF146', 'LCN9', 'TBC1D3P2', 'SNORA16B', 'FBXW12', 'MYBPC2', 'TMEM207', 'EPS8L3', 'SPATA19', 'SLC2A2', 'TTTY9B', 'TTTY8', 'ANXA8L1', 'SBSN', 'ADAM29', 'REG4', 'CHIAP2', 'ANP32D', 'GRK1', 'SPACA3', 'IGLL3P', 'CXADRP2', 'CETN1', 'IL26', 'CGB8', 'OR2M7', 'HBG2', 'FRMPD2B', 'CPLX3', 'OR4C12', 'ZNF679', 'SULT1C3', 'IVL', 'GUCY2F', 'GAGE2B', 'KRTAP21-1', 'SNORD94', 'PCGEM1', 'LMNTD1', 'MAGEA1', 'UGT1A5', 'DEFB134', 'CALR3', 'PSKH2', 'SNCB', 'FKBP6', 'PRAMEF1', 'MOGAT3', 'CYP7A1', 'POM121L2', 'CNGB1', 'GBX2', 'OR1E2', 'OR51I2', 'NYX', 'HAO1', 'LYZL1', 'OR51G2', 'NKX2-1', 'OR52E8', 'ZNF705A', 'OR5M8', 'LOC729609', 'OR6K6', 'GOLGA6L1', 'LINC00032', 'SATB2-AS1', 'ALX4', 'CCL24', 'FAM74A3', 'LINC00923', 'KCNK4', 'SNORA1', 'SNAR-F', 'SNORA84', 'TMEM88B', 'HTR3E', 'SLITRK3', 'SYCN', 'SLC25A31', 'KRTAP19-6', 'LINC00608', 'IFNA13', 'TSKS', 'SRY', 'TRHR', 'RPL3L', 'MAP3K15', 'BMP15', 'CRYGB', 'KGFLP1', 'ALLC', 'C10ORF120', 'DMRTB1', 'KRTAP2-1', 'NTS', 'INSC', 'DPPA2', 'RAX2', 'MUSK', 'CLRN1-AS1', 'TRIML1', 'TFAMP1', 'DKFZP434K028', 'FFAR1', 'KCNIP4-IT1', 'PROKR2', 'SLC6A5', 'NLRP13', 'POU6F2', 'FAM138D', 'LOC286238', 'OACYLP', 'CT47B1', 'OR1K1', 'GDPD2', 'DEFB123', 'ADGRD2', 'ANGPTL3', 'OR51F2', 'NKX2-3', 'KCNMB2', 'SLC36A3', 'CD200R1L', 'LCN1', 'MGC27382', 'MUC2', 'SPRR2E', 'LINC00520', 'MAGEA9B', 'GAGE12F', 'FOXD4L3', 'KIR3DL3', 'PTX4', 'AKR1C8P', 'CDRT15', 'GCSAML-AS1', 'LINC00575', 'IFNA7', 'LINC00479', 'HGC6.3', 'OR6A2', 'SLC10A1', 'CTRC', 'LINC00202-2', 'OR13C3', 'LINC01565', 'KRT25', 'ARL13A', 'KRTAP19-3', 'PAPOLB', 'MTVR2', 'SLC9C1', 'ADGRG4', 'IL36RN', 'LRRC30', 'KRTAP9-2', 'USP26', 'C12ORF50', 'KRT71', 'TRIM48', 'LHCGR', 'FAM71B', 'USP17L6P', 'BPIFB4', 'C6ORF10', 'OR7D4', 'LINC00303', 'USH1C', 'OCSTAMP', 'EDDM3B', 'CSN3', 'DAZ1', 'KRTAP10-6', 'OR2M4', 'DMRTC1', 'MAGEA6', 'ODF3', 'TNP1', 'AMER3', 'HULC', 'OR10W1', 'OR12D2', 'FOXR1', 'OR7G3', 'SLC17A6', 'PRB4', 'LINC01312', 'RPS4Y2', 'LINC00410', 'GUCA1C', 'KRTAP1-1', 'NKAIN3', 'NEUROD1', 'AQP2', 'XIRP2', 'CER1', 'SPOCK3', 'ACSM4', 'FAM170B', 'SPZ1', 'OR5M3', 'GKN2', 'KRTAP4-3', 'KRTAP1-5', 'FAM224B', 'ACSM2B', 'CRYGC', 'BTF3P11', 'OVCH1', 'BCYRN1', 'POTEG', 'BTN1A1', 'OR51B5', 'CHRNB3', 'GNAT3', 'FAM205A', 'LOC647859', 'HTR1A', 'PTH2', 'CALCB', 'SLC5A8', 'SLC5A7', 'OR1L4', 'LINC00304', 'TDH', 'HBE1', 'DMP1', 'MAGEB3', 'CNTN5', 'FAM19A1', 'OR2T10', 'FAM19A4', 'OR2AG1', 'FBXO47', 'HCRTR1', 'SHH', 'KCNG4', 'PRAC1', 'OR51M1', 'NLRP8', 'SHD', 'BPIFB3', 'SPANXN3', 'AHSG', 'OR13H1', 'SSX9', 'SERPINB12', 'LOC284798', 'LINC00671', 'NUTM1', 'KRT83', 'RFX6', 'SCTR', 'NCAN', 'LINC01142', 'OR7G2', 'AATK-AS1', 'H3F3AP5', 'SLC22A10', 'KRTAP11-1', 'FAM138B', 'C2ORF27B', 'GPHA2', 'DSCR10', 'CRISP2', 'UROC1', 'PPP1R2P9', 'DCT', 'PRL', 'POU4F2', 'HTR2C', 'NYAP2', 'SNORA76C', 'AVP', 'OR2G6', 'PTCHD3', 'AADACL3', 'TMEM14E', 'CLEC4G', 'HIST1H3A', 'PCP4', 'PPY2P', 'UGT1A4', 'GPR22', 'OR5H2', 'AIRE', 'KLRC4', 'OR2L8', 'AKR1D1', 'KCNJ16', 'TRIM75P', 'TRIM55', 'ARL14', 'CPA2', 'NF1P2', 'ISL1', 'ASB15', 'SPATA22', 'SPATA3', 'SSTR3', 'HIST2H2AB', 'OR2A14', 'LINC00207', 'IFNW1', 'SPATA45', 'CNGA2', 'POU4F3', 'SLC22A13', 'C16ORF90', 'GFI1B', 'APCS', 'C6ORF118', 'LOC145845', 'SNORA71B', 'SNORA62', 'PPAN-P2RY11', 'PCDH8', 'SNORA80E', 'FOXE3', 'NXPE1', 'UGT2B10', 'DEFB131', 'CACNG7', 'PRO0611', 'DEFB118', 'PCSK2', 'USP50', 'FAM170A', 'GNAS-AS1', 'LOC392196', 'ZFY', 'LOC400794', 'C1ORF140', 'CT47A6', 'MYH16', 'MIR1-1HG', 'C1ORF94', 'CGB2', 'CT47A7', 'MYL2', 'TMEM132D', 'CA4', 'MAGEA12', 'IGLL1', 'SLC4A9', 'LOC100132831', 'LRRC74A', 'OR10AD1', 'OR4D10', 'CALHM3', 'GH2', 'TDRG1', 'HPVC1', 'TMPRSS11B', 'HBM', 'SLC39A12', 'SLC22A12', 'IFNL1', 'RAPGEF4-AS1', 'ANKRD34C', 'ART1', 'GABRB1', 'OR2A12', 'DNAJC25-GNG10', 'LINC00710', 'ASB10', 'OR2A2', 'ZFAT-AS1', 'LINC00691', 'SH2D7', 'LINC01591', 'LINC00452', 'SCGB3A2', 'FAM47C', 'CSNK1A1P1', 'PRR32', 'SNORA72', 'GPR139', 'NEUROD6', 'KRTAP6-2', 'OR5B17', 'PDX1', 'ADRB3', 'GBA3', 'MTNR1A', 'GPR50', 'SPRR1B', 'MUC13', 'GPR61', 'KRTAP12-1', 'GSC2', 'GPRC6A', 'ANKRD20A20P', 'TRPM3', 'FERD3L', 'VIL1', 'CST9L', 'APOA5', 'NEUROG1', 'B4GALNT2', 'SNORA27', 'LHFPL4', 'C11ORF87', 'PRAMEF16', 'OR51L1', 'NKX6-2', 'SNORA2B', 'PRDM9', 'BANF2', 'PRSS1', 'PRSS57', 'OR51T1', 'VWA5B1', 'ZSCAN10', 'TKTL1', 'VSTM5', 'OTOP1', 'PRSS48', 'PAEP', 'SERPINB11', 'LINC00336', 'SPINK14', 'SNORA16A', 'RAET1L', 'SST', 'SSX2', 'CDHR5', 'NPSR1-AS1', 'C4ORF50', 'FOXG1', 'B3GALT1', 'TMEM252', 'PSAPL1', 'GOLGA2P6', 'PACRG-AS1', 'INS-IGF2', 'ZG16', 'MT1B', 'BET1P1', 'ITPK1-AS1', 'HYMAI', 'NHLH2', 'FAM71E2', 'FEZF1', 'OR52K2', 'NPY', 'MEP1A', 'OR2T2', 'SYT14P1', 'ADGRE3', 'OR3A2', 'SCARNA8', 'TRIM49', 'TRIM49D2', 'CLLU1', 'MAGEA11', 'OR2K2', 'BAGE', 'C9ORF171', 'NPSR1', 'CLEC4M', 'GJB4', 'ACTL7B', 'LINC00244', 'CPN1', 'OTC', 'CTRB2', 'FRMPD2', 'C1ORF158', 'SPINT3', 'GCGR', 'OR4D1', 'SNORA67', 'GCKR', 'C17ORF78', 'SNORA38', 'NPPC', 'MBL2', 'KLK13', 'KRTAP3-2', 'TAS2R42', 'CCER1', 'RNF222', 'SLCO1A2', 'DACH2', 'IFNL2', 'CACNG3', 'PASD1', 'LOC100130264', 'IL13', 'FER1L6', 'DMRTC2', 'CYP1A2', 'OPRM1', 'OR12D3', 'FAM9B', 'FRG2DP', 'CMTM5', 'TNP2', 'TP53TG5', 'LINC00964', 'CHRNA9', 'MAS1L', 'CCDC54', 'F2', 'C12ORF56', 'CLRN1', 'S100A12', 'OR5M1', 'CYP2A7', 'OR5K1', 'POU4F1', 'ATOH7', 'VCX3A', 'MYADML', 'SLITRK1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 8.683809542278645e-16 NRMSE: 6.092362310068085e-16 MAPE: 2.4372235810068172e-12 Pearson Correlation: -0.013403030556358332 Spearman Correlation: -0.008137258569308845 Coefficient of Determination: -2.5440218293992105 RMSE: 0.3545387533217006 NRMSE: 0.3083830606362701 MAPE: 600.1159956611205 Predictor: ElasticNet Pearson Correlation: 0.7394023230404122 Spearman Correlation: 0.6771663230570774 Coefficient of Determination: 0.47650104931443316 RMSE: 0.15375835224874443 NRMSE: 0.1078733458556045 MAPE: 510.0772352091523 Pearson Correlation: 0.2691423524043783 Spearman Correlation: 0.21166598087257948 Coefficient of Determination: 0.0326958144623376 RMSE: 0.18522391207200056 NRMSE: 0.1611105030765355 MAPE: 181.82299037007232 Predictor: RandomForests Pearson Correlation: 0.6173895521782524 Spearman Correlation: 0.6066149973708634 Coefficient of Determination: 0.2884439250604295 RMSE: 0.17926081801205096 NRMSE: 0.12576529298707062 MAPE: 390.24179461314014 Pearson Correlation: 0.3577472500964144 Spearman Correlation: 0.3404705794336588 Coefficient of Determination: 0.12048087426813925 RMSE: 0.17661930158101632 NRMSE: 0.1536260853819064 MAPE: 174.6915970553601 Protein: PTEN x_train_column_count: 1053 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'LINC00200', 'OR52B4', 'OR4F15', 'OR8J3', 'HTR5A', 'DAZL', 'RAB9BP1', 'SNORA32', 'C10ORF53', 'KRTAP19-8', 'IFNA16', 'OR2L2', 'TGIF2LX', 'F13B', 'FAM71A', 'OR11L1', 'OR9A2', 'OR8B3', 'TXLNGY', 'ZCCHC13', 'HBG1', 'OR2M3', 'GUCA2B', 'CLEC6A', 'NXF2B', 'OR10V1', 'OR10A5', 'SNORA51', 'OTX2', 'GRIN2B', 'TMPRSS11F', 'WFDC5', 'IL31', 'OR8S1', 'FGF23', 'OR5H14', 'HMHB1', 'PSG7', 'C18ORF42', 'LINC00895', 'MS4A6E', 'PPY', 'GOLGA6D', 'SCGB1C1', 'NOX3', 'KRTAP10-12', 'OR1N1', 'ASB17', 'ADAM18', 'ITLN2', 'RPL13AP17', 'OR1S2', 'KRTAP10-11', 'VWC2L', 'OR2G2', 'OR8G5', 'TAAR9', 'BRDTP1', 'PLG', 'SSX5', 'LEUTX', 'OR4D9', 'PWAR4', 'CRYAA', 'MAGEA10', 'TTTY14', 'TPD52L3', 'HIST1H4F', 'LINC01205', 'GDNF', 'SNORA34', 'CAPZA3', 'POTED', 'GPR52', 'MMP23A', 'LINC00636', 'ARSF', 'TCP10L2', 'SNORD89', 'XAGE5', 'C2ORF83', 'KRTAP12-2', 'COL6A4P1', 'TSGA13', 'LOC391343', 'ALOX12B', 'BTNL3', 'LOC391003', 'CYP11B2', 'CFHR4', 'SNORA70B', 'SFTA3', 'FAM27B', 'FMR1NB', 'HBD', 'RSPH6A', 'OR5T2', 'ANKUB1', 'OR4S1', 'BPIFA3', 'TRIM51', 'CYP2W1', 'OR9G4', 'CASC8', 'OPN1MW', 'SLC38A8', 'SSX8', 'ACTR3BP2', 'PROKR1', 'FOXN3-AS2', 'ARR3', 'OR56A1', 'ACTRT2', 'INSM2', 'P2RX3', 'ARHGAP36', 'HNRNPCL1', 'TBC1D28', 'DMRT1', 'SDR16C6P', 'LINC00469', 'TAS2R60', 'STATH', 'KHDC1L', 'LINC00111', 'SLC13A1', 'ANKRD18DP', 'PF4', 'POTEH', 'C11ORF94', 'RESP18', 'EDDM3A', 'RTP2', 'DAOA', 'ASB18', 'C20ORF173', 'TKTL2', 'ADGRG7', 'OR4C16', 'DEFB126', 'DEFB129', 'GAGE1', 'OR4F5', 'ZIM3', 'IFITM5', 'OR6Y1', 'OR7A17', 'LINC00114', 'SPACA7', 'DUXA', 'OR6B3', 'DEFB104A', 'LHX9', 'SOX3', 'YWHAEP7', 'OR8H2', 'LGI3', 'FAM169B', 'PRAMEF20', 'CTRB1', 'LINC01566', 'KRTAP19-2', 'RGS8', 'MYBPHL', 'KRTAP6-1', 'KRTAP25-1', 'TRPV5', 'LINC00523', 'WFDC8', 'TCP10', 'GAGE2D', 'KCNQ1DN', 'TAS2R13', 'CPLX4', 'OR52H1', 'CLRN2', 'TMEM72', 'HSFY2', 'OR2T35', 'SFTPC', 'OR4K17', 'KRTAP13-1', 'SPANXA2', 'CCKAR', 'MYF5', 'TMEM202', 'GABRG3', 'AVPR1B', 'OR4K2', 'FCAMR', 'ASAP1-IT1', 'INS', 'CGB5', 'MMD2', 'CNTNAP4', 'LCNL1', 'FDCSP', 'KLK9', 'OLFM3', 'GH1', 'MAGEB6', 'CCDC166', 'LINC01101', 'SPDYC', 'MBD3L5', 'CRNN', 'LINC00113', 'CRLF2', 'NEU2', 'BEND2', 'HPD', 'OR8G2', 'OR14I1', 'SVOP', 'FAM71C', 'OLIG1', 'YIPF7', 'TPTE', 'IQCJ', 'OTOL1', 'IZUMO1R', 'LIPN', 'PRDM14', 'CYLC2', 'OR10H2', 'FAM27L', 'LRRTM1', 'OLAH', 'PRKAG3', 'HOXC12', 'PSG11', 'LOC285847', 'TARM1', 'DNTT', 'XAGE3', 'ALPPL2', 'FTMT', 'TCEB3C', 'FRMPD4', 'RHAG', 'SNORD115-26', 'GUCY2EP', 'KRTAP10-7', 'NANOS2', 'KRTAP10-1', 'SCN1A', 'KRT85', 'DEFB110', 'DAW1', 'OR4D6', 'LPO', 'BARHL2', 'OPRD1', 'DISC2', 'OR5H6', 'ABRA', 'OR5M10', 'IL17F', 'UGT2A3', 'C9ORF135', 'XKR7', 'PYDC2', 'UCMA', 'NKX1-2', 'LOC646813', 'OR1L1', 'TFF2', 'F11', 'OR6B2', 'SNORA59B', 'LCE1D', 'C20ORF166-AS1', 'PISRT1', 'TTTY15', 'C1ORF146', 'LCN9', 'TBC1D3P2', 'SNORA16B', 'FBXW12', 'MYBPC2', 'TMEM207', 'EPS8L3', 'SPATA19', 'SLC2A2', 'TTTY9B', 'TTTY8', 'ANXA8L1', 'SBSN', 'ADAM29', 'REG4', 'CHIAP2', 'ANP32D', 'GRK1', 'SPACA3', 'IGLL3P', 'CXADRP2', 'CETN1', 'IL26', 'CGB8', 'OR2M7', 'HBG2', 'FRMPD2B', 'CPLX3', 'OR4C12', 'ZNF679', 'SULT1C3', 'IVL', 'GUCY2F', 'GAGE2B', 'KRTAP21-1', 'SNORD94', 'PCGEM1', 'LMNTD1', 'MAGEA1', 'UGT1A5', 'DEFB134', 'CALR3', 'PSKH2', 'SNCB', 'FKBP6', 'PRAMEF1', 'MOGAT3', 'CYP7A1', 'POM121L2', 'CNGB1', 'GBX2', 'OR1E2', 'OR51I2', 'NYX', 'HAO1', 'LYZL1', 'OR51G2', 'NKX2-1', 'OR52E8', 'ZNF705A', 'OR5M8', 'LOC729609', 'OR6K6', 'GOLGA6L1', 'LINC00032', 'SATB2-AS1', 'ALX4', 'CCL24', 'FAM74A3', 'LINC00923', 'KCNK4', 'SNORA1', 'SNAR-F', 'SNORA84', 'TMEM88B', 'HTR3E', 'SLITRK3', 'SYCN', 'SLC25A31', 'KRTAP19-6', 'LINC00608', 'IFNA13', 'TSKS', 'SRY', 'TRHR', 'RPL3L', 'MAP3K15', 'BMP15', 'CRYGB', 'KGFLP1', 'ALLC', 'C10ORF120', 'DMRTB1', 'KRTAP2-1', 'NTS', 'INSC', 'DPPA2', 'RAX2', 'MUSK', 'CLRN1-AS1', 'TRIML1', 'TFAMP1', 'DKFZP434K028', 'FFAR1', 'KCNIP4-IT1', 'PROKR2', 'SLC6A5', 'NLRP13', 'POU6F2', 'FAM138D', 'LOC286238', 'OACYLP', 'CT47B1', 'OR1K1', 'GDPD2', 'DEFB123', 'ADGRD2', 'ANGPTL3', 'OR51F2', 'NKX2-3', 'KCNMB2', 'SLC36A3', 'CD200R1L', 'LCN1', 'MGC27382', 'MUC2', 'SPRR2E', 'LINC00520', 'MAGEA9B', 'GAGE12F', 'FOXD4L3', 'KIR3DL3', 'PTX4', 'AKR1C8P', 'CDRT15', 'GCSAML-AS1', 'LINC00575', 'IFNA7', 'LINC00479', 'HGC6.3', 'OR6A2', 'SLC10A1', 'CTRC', 'LINC00202-2', 'OR13C3', 'LINC01565', 'KRT25', 'ARL13A', 'KRTAP19-3', 'PAPOLB', 'MTVR2', 'SLC9C1', 'ADGRG4', 'IL36RN', 'LRRC30', 'KRTAP9-2', 'USP26', 'C12ORF50', 'KRT71', 'TRIM48', 'LHCGR', 'FAM71B', 'USP17L6P', 'BPIFB4', 'C6ORF10', 'OR7D4', 'LINC00303', 'USH1C', 'OCSTAMP', 'EDDM3B', 'CSN3', 'DAZ1', 'KRTAP10-6', 'OR2M4', 'DMRTC1', 'MAGEA6', 'ODF3', 'TNP1', 'AMER3', 'HULC', 'OR10W1', 'OR12D2', 'FOXR1', 'OR7G3', 'SLC17A6', 'PRB4', 'LINC01312', 'RPS4Y2', 'LINC00410', 'GUCA1C', 'KRTAP1-1', 'NKAIN3', 'NEUROD1', 'AQP2', 'XIRP2', 'CER1', 'SPOCK3', 'ACSM4', 'FAM170B', 'SPZ1', 'OR5M3', 'GKN2', 'KRTAP4-3', 'KRTAP1-5', 'FAM224B', 'ACSM2B', 'CRYGC', 'BTF3P11', 'OVCH1', 'BCYRN1', 'POTEG', 'BTN1A1', 'OR51B5', 'CHRNB3', 'GNAT3', 'FAM205A', 'LOC647859', 'HTR1A', 'PTH2', 'CALCB', 'SLC5A8', 'SLC5A7', 'OR1L4', 'LINC00304', 'TDH', 'HBE1', 'DMP1', 'MAGEB3', 'CNTN5', 'FAM19A1', 'OR2T10', 'FAM19A4', 'OR2AG1', 'FBXO47', 'HCRTR1', 'SHH', 'KCNG4', 'PRAC1', 'OR51M1', 'NLRP8', 'SHD', 'BPIFB3', 'SPANXN3', 'AHSG', 'OR13H1', 'SSX9', 'SERPINB12', 'LOC284798', 'LINC00671', 'NUTM1', 'KRT83', 'RFX6', 'SCTR', 'NCAN', 'LINC01142', 'OR7G2', 'AATK-AS1', 'H3F3AP5', 'SLC22A10', 'KRTAP11-1', 'FAM138B', 'C2ORF27B', 'GPHA2', 'DSCR10', 'CRISP2', 'UROC1', 'PPP1R2P9', 'DCT', 'PRL', 'POU4F2', 'HTR2C', 'NYAP2', 'SNORA76C', 'AVP', 'OR2G6', 'PTCHD3', 'AADACL3', 'TMEM14E', 'CLEC4G', 'HIST1H3A', 'PCP4', 'PPY2P', 'UGT1A4', 'GPR22', 'OR5H2', 'AIRE', 'KLRC4', 'OR2L8', 'AKR1D1', 'KCNJ16', 'TRIM75P', 'TRIM55', 'ARL14', 'CPA2', 'NF1P2', 'ISL1', 'ASB15', 'SPATA22', 'SPATA3', 'SSTR3', 'HIST2H2AB', 'OR2A14', 'LINC00207', 'IFNW1', 'SPATA45', 'CNGA2', 'POU4F3', 'SLC22A13', 'C16ORF90', 'GFI1B', 'APCS', 'C6ORF118', 'LOC145845', 'SNORA71B', 'SNORA62', 'PPAN-P2RY11', 'PCDH8', 'SNORA80E', 'FOXE3', 'NXPE1', 'UGT2B10', 'DEFB131', 'CACNG7', 'PRO0611', 'DEFB118', 'PCSK2', 'USP50', 'FAM170A', 'GNAS-AS1', 'LOC392196', 'ZFY', 'LOC400794', 'C1ORF140', 'CT47A6', 'MYH16', 'MIR1-1HG', 'C1ORF94', 'CGB2', 'CT47A7', 'MYL2', 'TMEM132D', 'CA4', 'MAGEA12', 'IGLL1', 'SLC4A9', 'LOC100132831', 'LRRC74A', 'OR10AD1', 'OR4D10', 'CALHM3', 'GH2', 'TDRG1', 'HPVC1', 'TMPRSS11B', 'HBM', 'SLC39A12', 'SLC22A12', 'IFNL1', 'RAPGEF4-AS1', 'ANKRD34C', 'ART1', 'GABRB1', 'OR2A12', 'DNAJC25-GNG10', 'LINC00710', 'ASB10', 'OR2A2', 'ZFAT-AS1', 'LINC00691', 'SH2D7', 'LINC01591', 'LINC00452', 'SCGB3A2', 'FAM47C', 'CSNK1A1P1', 'PRR32', 'SNORA72', 'GPR139', 'NEUROD6', 'KRTAP6-2', 'OR5B17', 'PDX1', 'ADRB3', 'GBA3', 'MTNR1A', 'GPR50', 'SPRR1B', 'MUC13', 'GPR61', 'KRTAP12-1', 'GSC2', 'GPRC6A', 'ANKRD20A20P', 'TRPM3', 'FERD3L', 'VIL1', 'CST9L', 'APOA5', 'NEUROG1', 'B4GALNT2', 'SNORA27', 'LHFPL4', 'C11ORF87', 'PRAMEF16', 'OR51L1', 'NKX6-2', 'SNORA2B', 'PRDM9', 'BANF2', 'PRSS1', 'PRSS57', 'OR51T1', 'VWA5B1', 'ZSCAN10', 'TKTL1', 'VSTM5', 'OTOP1', 'PRSS48', 'PAEP', 'SERPINB11', 'LINC00336', 'SPINK14', 'SNORA16A', 'RAET1L', 'SST', 'SSX2', 'CDHR5', 'NPSR1-AS1', 'C4ORF50', 'FOXG1', 'B3GALT1', 'TMEM252', 'PSAPL1', 'GOLGA2P6', 'PACRG-AS1', 'INS-IGF2', 'ZG16', 'MT1B', 'BET1P1', 'ITPK1-AS1', 'HYMAI', 'NHLH2', 'FAM71E2', 'FEZF1', 'OR52K2', 'NPY', 'MEP1A', 'OR2T2', 'SYT14P1', 'ADGRE3', 'OR3A2', 'SCARNA8', 'TRIM49', 'TRIM49D2', 'CLLU1', 'MAGEA11', 'OR2K2', 'BAGE', 'C9ORF171', 'NPSR1', 'CLEC4M', 'GJB4', 'ACTL7B', 'LINC00244', 'CPN1', 'OTC', 'CTRB2', 'FRMPD2', 'C1ORF158', 'SPINT3', 'GCGR', 'OR4D1', 'SNORA67', 'GCKR', 'C17ORF78', 'SNORA38', 'NPPC', 'MBL2', 'KLK13', 'KRTAP3-2', 'TAS2R42', 'CCER1', 'RNF222', 'SLCO1A2', 'DACH2', 'IFNL2', 'CACNG3', 'PASD1', 'LOC100130264', 'IL13', 'FER1L6', 'DMRTC2', 'CYP1A2', 'OPRM1', 'OR12D3', 'FAM9B', 'FRG2DP', 'CMTM5', 'TNP2', 'TP53TG5', 'LINC00964', 'CHRNA9', 'MAS1L', 'CCDC54', 'F2', 'C12ORF56', 'CLRN1', 'S100A12', 'OR5M1', 'CYP2A7', 'OR5K1', 'POU4F1', 'ATOH7', 'VCX3A', 'MYADML', 'SLITRK1', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.7204684544862734e-15 NRMSE: 4.2537228590200504e-16 MAPE: 4.160807083220984e-12 Pearson Correlation: 0.11644331160517331 Spearman Correlation: 0.04387336500455118 Coefficient of Determination: -2.48169327469586 RMSE: 0.8787752429100629 NRMSE: 0.2101026258571374 MAPE: 333.314093713349 Predictor: ElasticNet Pearson Correlation: 0.8747912906631858 Spearman Correlation: 0.8404754770176641 Coefficient of Determination: 0.7224742283940597 RMSE: 0.3315167455065038 NRMSE: 0.05183593862974025 MAPE: 295.6275236910947 Pearson Correlation: 0.3095154131807765 Spearman Correlation: 0.3061210239529172 Coefficient of Determination: 0.017026464892761606 RMSE: 0.4669318210005761 NRMSE: 0.11163673815343952 MAPE: 128.84586475354257 Predictor: RandomForests Pearson Correlation: 0.5802181429018552 Spearman Correlation: 0.5295998706193267 Coefficient of Determination: 0.2823585092153975 RMSE: 0.5330986475551625 NRMSE: 0.08335527285672151 MAPE: 349.7831530363957 Pearson Correlation: 0.37270507760026145 Spearman Correlation: 0.39398246860933434 Coefficient of Determination: 0.13146779644954487 RMSE: 0.43891004670597583 NRMSE: 0.10493713161812648 MAPE: 116.18675966471928 Protein: BRCA2 x_train_column_count: 1053 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'LINC00200', 'OR52B4', 'OR4F15', 'OR8J3', 'HTR5A', 'DAZL', 'RAB9BP1', 'SNORA32', 'C10ORF53', 'KRTAP19-8', 'IFNA16', 'OR2L2', 'TGIF2LX', 'F13B', 'FAM71A', 'OR11L1', 'OR9A2', 'OR8B3', 'TXLNGY', 'ZCCHC13', 'HBG1', 'OR2M3', 'GUCA2B', 'CLEC6A', 'NXF2B', 'OR10V1', 'OR10A5', 'SNORA51', 'OTX2', 'GRIN2B', 'TMPRSS11F', 'WFDC5', 'IL31', 'OR8S1', 'FGF23', 'OR5H14', 'HMHB1', 'PSG7', 'C18ORF42', 'LINC00895', 'MS4A6E', 'PPY', 'GOLGA6D', 'SCGB1C1', 'NOX3', 'KRTAP10-12', 'OR1N1', 'ASB17', 'ADAM18', 'ITLN2', 'RPL13AP17', 'OR1S2', 'KRTAP10-11', 'VWC2L', 'OR2G2', 'OR8G5', 'TAAR9', 'BRDTP1', 'PLG', 'SSX5', 'LEUTX', 'OR4D9', 'PWAR4', 'CRYAA', 'MAGEA10', 'TTTY14', 'TPD52L3', 'HIST1H4F', 'LINC01205', 'GDNF', 'SNORA34', 'CAPZA3', 'POTED', 'GPR52', 'MMP23A', 'LINC00636', 'ARSF', 'TCP10L2', 'SNORD89', 'XAGE5', 'C2ORF83', 'KRTAP12-2', 'COL6A4P1', 'TSGA13', 'LOC391343', 'ALOX12B', 'BTNL3', 'LOC391003', 'CYP11B2', 'CFHR4', 'SNORA70B', 'SFTA3', 'FAM27B', 'FMR1NB', 'HBD', 'RSPH6A', 'OR5T2', 'ANKUB1', 'OR4S1', 'BPIFA3', 'TRIM51', 'CYP2W1', 'OR9G4', 'CASC8', 'OPN1MW', 'SLC38A8', 'SSX8', 'ACTR3BP2', 'PROKR1', 'FOXN3-AS2', 'ARR3', 'OR56A1', 'ACTRT2', 'INSM2', 'P2RX3', 'ARHGAP36', 'HNRNPCL1', 'TBC1D28', 'DMRT1', 'SDR16C6P', 'LINC00469', 'TAS2R60', 'STATH', 'KHDC1L', 'LINC00111', 'SLC13A1', 'ANKRD18DP', 'PF4', 'POTEH', 'C11ORF94', 'RESP18', 'EDDM3A', 'RTP2', 'DAOA', 'ASB18', 'C20ORF173', 'TKTL2', 'ADGRG7', 'OR4C16', 'DEFB126', 'DEFB129', 'GAGE1', 'OR4F5', 'ZIM3', 'IFITM5', 'OR6Y1', 'OR7A17', 'LINC00114', 'SPACA7', 'DUXA', 'OR6B3', 'DEFB104A', 'LHX9', 'SOX3', 'YWHAEP7', 'OR8H2', 'LGI3', 'FAM169B', 'PRAMEF20', 'CTRB1', 'LINC01566', 'KRTAP19-2', 'RGS8', 'MYBPHL', 'KRTAP6-1', 'KRTAP25-1', 'TRPV5', 'LINC00523', 'WFDC8', 'TCP10', 'GAGE2D', 'KCNQ1DN', 'TAS2R13', 'CPLX4', 'OR52H1', 'CLRN2', 'TMEM72', 'HSFY2', 'OR2T35', 'SFTPC', 'OR4K17', 'KRTAP13-1', 'SPANXA2', 'CCKAR', 'MYF5', 'TMEM202', 'GABRG3', 'AVPR1B', 'OR4K2', 'FCAMR', 'ASAP1-IT1', 'INS', 'CGB5', 'MMD2', 'CNTNAP4', 'LCNL1', 'FDCSP', 'KLK9', 'OLFM3', 'GH1', 'MAGEB6', 'CCDC166', 'LINC01101', 'SPDYC', 'MBD3L5', 'CRNN', 'LINC00113', 'CRLF2', 'NEU2', 'BEND2', 'HPD', 'OR8G2', 'OR14I1', 'SVOP', 'FAM71C', 'OLIG1', 'YIPF7', 'TPTE', 'IQCJ', 'OTOL1', 'IZUMO1R', 'LIPN', 'PRDM14', 'CYLC2', 'OR10H2', 'FAM27L', 'LRRTM1', 'OLAH', 'PRKAG3', 'HOXC12', 'PSG11', 'LOC285847', 'TARM1', 'DNTT', 'XAGE3', 'ALPPL2', 'FTMT', 'TCEB3C', 'FRMPD4', 'RHAG', 'SNORD115-26', 'GUCY2EP', 'KRTAP10-7', 'NANOS2', 'KRTAP10-1', 'SCN1A', 'KRT85', 'DEFB110', 'DAW1', 'OR4D6', 'LPO', 'BARHL2', 'OPRD1', 'DISC2', 'OR5H6', 'ABRA', 'OR5M10', 'IL17F', 'UGT2A3', 'C9ORF135', 'XKR7', 'PYDC2', 'UCMA', 'NKX1-2', 'LOC646813', 'OR1L1', 'TFF2', 'F11', 'OR6B2', 'SNORA59B', 'LCE1D', 'C20ORF166-AS1', 'PISRT1', 'TTTY15', 'C1ORF146', 'LCN9', 'TBC1D3P2', 'SNORA16B', 'FBXW12', 'MYBPC2', 'TMEM207', 'EPS8L3', 'SPATA19', 'SLC2A2', 'TTTY9B', 'TTTY8', 'ANXA8L1', 'SBSN', 'ADAM29', 'REG4', 'CHIAP2', 'ANP32D', 'GRK1', 'SPACA3', 'IGLL3P', 'CXADRP2', 'CETN1', 'IL26', 'CGB8', 'OR2M7', 'HBG2', 'FRMPD2B', 'CPLX3', 'OR4C12', 'ZNF679', 'SULT1C3', 'IVL', 'GUCY2F', 'GAGE2B', 'KRTAP21-1', 'SNORD94', 'PCGEM1', 'LMNTD1', 'MAGEA1', 'UGT1A5', 'DEFB134', 'CALR3', 'PSKH2', 'SNCB', 'FKBP6', 'PRAMEF1', 'MOGAT3', 'CYP7A1', 'POM121L2', 'CNGB1', 'GBX2', 'OR1E2', 'OR51I2', 'NYX', 'HAO1', 'LYZL1', 'OR51G2', 'NKX2-1', 'OR52E8', 'ZNF705A', 'OR5M8', 'LOC729609', 'OR6K6', 'GOLGA6L1', 'LINC00032', 'SATB2-AS1', 'ALX4', 'CCL24', 'FAM74A3', 'LINC00923', 'KCNK4', 'SNORA1', 'SNAR-F', 'SNORA84', 'TMEM88B', 'HTR3E', 'SLITRK3', 'SYCN', 'SLC25A31', 'KRTAP19-6', 'LINC00608', 'IFNA13', 'TSKS', 'SRY', 'TRHR', 'RPL3L', 'MAP3K15', 'BMP15', 'CRYGB', 'KGFLP1', 'ALLC', 'C10ORF120', 'DMRTB1', 'KRTAP2-1', 'NTS', 'INSC', 'DPPA2', 'RAX2', 'MUSK', 'CLRN1-AS1', 'TRIML1', 'TFAMP1', 'DKFZP434K028', 'FFAR1', 'KCNIP4-IT1', 'PROKR2', 'SLC6A5', 'NLRP13', 'POU6F2', 'FAM138D', 'LOC286238', 'OACYLP', 'CT47B1', 'OR1K1', 'GDPD2', 'DEFB123', 'ADGRD2', 'ANGPTL3', 'OR51F2', 'NKX2-3', 'KCNMB2', 'SLC36A3', 'CD200R1L', 'LCN1', 'MGC27382', 'MUC2', 'SPRR2E', 'LINC00520', 'MAGEA9B', 'GAGE12F', 'FOXD4L3', 'KIR3DL3', 'PTX4', 'AKR1C8P', 'CDRT15', 'GCSAML-AS1', 'LINC00575', 'IFNA7', 'LINC00479', 'HGC6.3', 'OR6A2', 'SLC10A1', 'CTRC', 'LINC00202-2', 'OR13C3', 'LINC01565', 'KRT25', 'ARL13A', 'KRTAP19-3', 'PAPOLB', 'MTVR2', 'SLC9C1', 'ADGRG4', 'IL36RN', 'LRRC30', 'KRTAP9-2', 'USP26', 'C12ORF50', 'KRT71', 'TRIM48', 'LHCGR', 'FAM71B', 'USP17L6P', 'BPIFB4', 'C6ORF10', 'OR7D4', 'LINC00303', 'USH1C', 'OCSTAMP', 'EDDM3B', 'CSN3', 'DAZ1', 'KRTAP10-6', 'OR2M4', 'DMRTC1', 'MAGEA6', 'ODF3', 'TNP1', 'AMER3', 'HULC', 'OR10W1', 'OR12D2', 'FOXR1', 'OR7G3', 'SLC17A6', 'PRB4', 'LINC01312', 'RPS4Y2', 'LINC00410', 'GUCA1C', 'KRTAP1-1', 'NKAIN3', 'NEUROD1', 'AQP2', 'XIRP2', 'CER1', 'SPOCK3', 'ACSM4', 'FAM170B', 'SPZ1', 'OR5M3', 'GKN2', 'KRTAP4-3', 'KRTAP1-5', 'FAM224B', 'ACSM2B', 'CRYGC', 'BTF3P11', 'OVCH1', 'BCYRN1', 'POTEG', 'BTN1A1', 'OR51B5', 'CHRNB3', 'GNAT3', 'FAM205A', 'LOC647859', 'HTR1A', 'PTH2', 'CALCB', 'SLC5A8', 'SLC5A7', 'OR1L4', 'LINC00304', 'TDH', 'HBE1', 'DMP1', 'MAGEB3', 'CNTN5', 'FAM19A1', 'OR2T10', 'FAM19A4', 'OR2AG1', 'FBXO47', 'HCRTR1', 'SHH', 'KCNG4', 'PRAC1', 'OR51M1', 'NLRP8', 'SHD', 'BPIFB3', 'SPANXN3', 'AHSG', 'OR13H1', 'SSX9', 'SERPINB12', 'LOC284798', 'LINC00671', 'NUTM1', 'KRT83', 'RFX6', 'SCTR', 'NCAN', 'LINC01142', 'OR7G2', 'AATK-AS1', 'H3F3AP5', 'SLC22A10', 'KRTAP11-1', 'FAM138B', 'C2ORF27B', 'GPHA2', 'DSCR10', 'CRISP2', 'UROC1', 'PPP1R2P9', 'DCT', 'PRL', 'POU4F2', 'HTR2C', 'NYAP2', 'SNORA76C', 'AVP', 'OR2G6', 'PTCHD3', 'AADACL3', 'TMEM14E', 'CLEC4G', 'HIST1H3A', 'PCP4', 'PPY2P', 'UGT1A4', 'GPR22', 'OR5H2', 'AIRE', 'KLRC4', 'OR2L8', 'AKR1D1', 'KCNJ16', 'TRIM75P', 'TRIM55', 'ARL14', 'CPA2', 'NF1P2', 'ISL1', 'ASB15', 'SPATA22', 'SPATA3', 'SSTR3', 'HIST2H2AB', 'OR2A14', 'LINC00207', 'IFNW1', 'SPATA45', 'CNGA2', 'POU4F3', 'SLC22A13', 'C16ORF90', 'GFI1B', 'APCS', 'C6ORF118', 'LOC145845', 'SNORA71B', 'SNORA62', 'PPAN-P2RY11', 'PCDH8', 'SNORA80E', 'FOXE3', 'NXPE1', 'UGT2B10', 'DEFB131', 'CACNG7', 'PRO0611', 'DEFB118', 'PCSK2', 'USP50', 'FAM170A', 'GNAS-AS1', 'LOC392196', 'ZFY', 'LOC400794', 'C1ORF140', 'CT47A6', 'MYH16', 'MIR1-1HG', 'C1ORF94', 'CGB2', 'CT47A7', 'MYL2', 'TMEM132D', 'CA4', 'MAGEA12', 'IGLL1', 'SLC4A9', 'LOC100132831', 'LRRC74A', 'OR10AD1', 'OR4D10', 'CALHM3', 'GH2', 'TDRG1', 'HPVC1', 'TMPRSS11B', 'HBM', 'SLC39A12', 'SLC22A12', 'IFNL1', 'RAPGEF4-AS1', 'ANKRD34C', 'ART1', 'GABRB1', 'OR2A12', 'DNAJC25-GNG10', 'LINC00710', 'ASB10', 'OR2A2', 'ZFAT-AS1', 'LINC00691', 'SH2D7', 'LINC01591', 'LINC00452', 'SCGB3A2', 'FAM47C', 'CSNK1A1P1', 'PRR32', 'SNORA72', 'GPR139', 'NEUROD6', 'KRTAP6-2', 'OR5B17', 'PDX1', 'ADRB3', 'GBA3', 'MTNR1A', 'GPR50', 'SPRR1B', 'MUC13', 'GPR61', 'KRTAP12-1', 'GSC2', 'GPRC6A', 'ANKRD20A20P', 'TRPM3', 'FERD3L', 'VIL1', 'CST9L', 'APOA5', 'NEUROG1', 'B4GALNT2', 'SNORA27', 'LHFPL4', 'C11ORF87', 'PRAMEF16', 'OR51L1', 'NKX6-2', 'SNORA2B', 'PRDM9', 'BANF2', 'PRSS1', 'PRSS57', 'OR51T1', 'VWA5B1', 'ZSCAN10', 'TKTL1', 'VSTM5', 'OTOP1', 'PRSS48', 'PAEP', 'SERPINB11', 'LINC00336', 'SPINK14', 'SNORA16A', 'RAET1L', 'SST', 'SSX2', 'CDHR5', 'NPSR1-AS1', 'C4ORF50', 'FOXG1', 'B3GALT1', 'TMEM252', 'PSAPL1', 'GOLGA2P6', 'PACRG-AS1', 'INS-IGF2', 'ZG16', 'MT1B', 'BET1P1', 'ITPK1-AS1', 'HYMAI', 'NHLH2', 'FAM71E2', 'FEZF1', 'OR52K2', 'NPY', 'MEP1A', 'OR2T2', 'SYT14P1', 'ADGRE3', 'OR3A2', 'SCARNA8', 'TRIM49', 'TRIM49D2', 'CLLU1', 'MAGEA11', 'OR2K2', 'BAGE', 'C9ORF171', 'NPSR1', 'CLEC4M', 'GJB4', 'ACTL7B', 'LINC00244', 'CPN1', 'OTC', 'CTRB2', 'FRMPD2', 'C1ORF158', 'SPINT3', 'GCGR', 'OR4D1', 'SNORA67', 'GCKR', 'C17ORF78', 'SNORA38', 'NPPC', 'MBL2', 'KLK13', 'KRTAP3-2', 'TAS2R42', 'CCER1', 'RNF222', 'SLCO1A2', 'DACH2', 'IFNL2', 'CACNG3', 'PASD1', 'LOC100130264', 'IL13', 'FER1L6', 'DMRTC2', 'CYP1A2', 'OPRM1', 'OR12D3', 'FAM9B', 'FRG2DP', 'CMTM5', 'TNP2', 'TP53TG5', 'LINC00964', 'CHRNA9', 'MAS1L', 'CCDC54', 'F2', 'C12ORF56', 'CLRN1', 'S100A12', 'OR5M1', 'CYP2A7', 'OR5K1', 'POU4F1', 'ATOH7', 'VCX3A', 'MYADML', 'SLITRK1', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 8.209861678087106e-16 NRMSE: 5.533295822720666e-16 MAPE: 1.6552292737744988e-12 Pearson Correlation: 0.16161045889542786 Spearman Correlation: 0.1718949114078729 Coefficient of Determination: -0.8682133034689623 RMSE: 0.292680390455184 NRMSE: 0.20130848307312385 MAPE: 845.7458211041352 Predictor: ElasticNet Pearson Correlation: 0.6813454688457575 Spearman Correlation: 0.6028463027640172 Coefficient of Determination: 0.336976770619939 RMSE: 0.1547506872134627 NRMSE: 0.1042991179019375 MAPE: 111.58255917462657 Pearson Correlation: 0.15505870363963936 Spearman Correlation: 0.11910622326961684 Coefficient of Determination: 0.023081758960910248 RMSE: 0.2116457271117805 NRMSE: 0.14557203578797606 MAPE: 148.85454663292091 Predictor: RandomForests Pearson Correlation: 0.616344217620746 Spearman Correlation: 0.6187245380063678 Coefficient of Determination: 0.16124814796566023 RMSE: 0.17405438143477636 NRMSE: 0.11730945288516456 MAPE: 113.49818305616768 Pearson Correlation: 0.18483479900405544 Spearman Correlation: 0.1497300465093081 Coefficient of Determination: 0.023329951030119145 RMSE: 0.21161884045664217 NRMSE: 0.14555354287920144 MAPE: 142.8217333726459 Protein: CDKN2A x_train_column_count: 1053 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'LINC00200', 'OR52B4', 'OR4F15', 'OR8J3', 'HTR5A', 'DAZL', 'RAB9BP1', 'SNORA32', 'C10ORF53', 'KRTAP19-8', 'IFNA16', 'OR2L2', 'TGIF2LX', 'F13B', 'FAM71A', 'OR11L1', 'OR9A2', 'OR8B3', 'TXLNGY', 'ZCCHC13', 'HBG1', 'OR2M3', 'GUCA2B', 'CLEC6A', 'NXF2B', 'OR10V1', 'OR10A5', 'SNORA51', 'OTX2', 'GRIN2B', 'TMPRSS11F', 'WFDC5', 'IL31', 'OR8S1', 'FGF23', 'OR5H14', 'HMHB1', 'PSG7', 'C18ORF42', 'LINC00895', 'MS4A6E', 'PPY', 'GOLGA6D', 'SCGB1C1', 'NOX3', 'KRTAP10-12', 'OR1N1', 'ASB17', 'ADAM18', 'ITLN2', 'RPL13AP17', 'OR1S2', 'KRTAP10-11', 'VWC2L', 'OR2G2', 'OR8G5', 'TAAR9', 'BRDTP1', 'PLG', 'SSX5', 'LEUTX', 'OR4D9', 'PWAR4', 'CRYAA', 'MAGEA10', 'TTTY14', 'TPD52L3', 'HIST1H4F', 'LINC01205', 'GDNF', 'SNORA34', 'CAPZA3', 'POTED', 'GPR52', 'MMP23A', 'LINC00636', 'ARSF', 'TCP10L2', 'SNORD89', 'XAGE5', 'C2ORF83', 'KRTAP12-2', 'COL6A4P1', 'TSGA13', 'LOC391343', 'ALOX12B', 'BTNL3', 'LOC391003', 'CYP11B2', 'CFHR4', 'SNORA70B', 'SFTA3', 'FAM27B', 'FMR1NB', 'HBD', 'RSPH6A', 'OR5T2', 'ANKUB1', 'OR4S1', 'BPIFA3', 'TRIM51', 'CYP2W1', 'OR9G4', 'CASC8', 'OPN1MW', 'SLC38A8', 'SSX8', 'ACTR3BP2', 'PROKR1', 'FOXN3-AS2', 'ARR3', 'OR56A1', 'ACTRT2', 'INSM2', 'P2RX3', 'ARHGAP36', 'HNRNPCL1', 'TBC1D28', 'DMRT1', 'SDR16C6P', 'LINC00469', 'TAS2R60', 'STATH', 'KHDC1L', 'LINC00111', 'SLC13A1', 'ANKRD18DP', 'PF4', 'POTEH', 'C11ORF94', 'RESP18', 'EDDM3A', 'RTP2', 'DAOA', 'ASB18', 'C20ORF173', 'TKTL2', 'ADGRG7', 'OR4C16', 'DEFB126', 'DEFB129', 'GAGE1', 'OR4F5', 'ZIM3', 'IFITM5', 'OR6Y1', 'OR7A17', 'LINC00114', 'SPACA7', 'DUXA', 'OR6B3', 'DEFB104A', 'LHX9', 'SOX3', 'YWHAEP7', 'OR8H2', 'LGI3', 'FAM169B', 'PRAMEF20', 'CTRB1', 'LINC01566', 'KRTAP19-2', 'RGS8', 'MYBPHL', 'KRTAP6-1', 'KRTAP25-1', 'TRPV5', 'LINC00523', 'WFDC8', 'TCP10', 'GAGE2D', 'KCNQ1DN', 'TAS2R13', 'CPLX4', 'OR52H1', 'CLRN2', 'TMEM72', 'HSFY2', 'OR2T35', 'SFTPC', 'OR4K17', 'KRTAP13-1', 'SPANXA2', 'CCKAR', 'MYF5', 'TMEM202', 'GABRG3', 'AVPR1B', 'OR4K2', 'FCAMR', 'ASAP1-IT1', 'INS', 'CGB5', 'MMD2', 'CNTNAP4', 'LCNL1', 'FDCSP', 'KLK9', 'OLFM3', 'GH1', 'MAGEB6', 'CCDC166', 'LINC01101', 'SPDYC', 'MBD3L5', 'CRNN', 'LINC00113', 'CRLF2', 'NEU2', 'BEND2', 'HPD', 'OR8G2', 'OR14I1', 'SVOP', 'FAM71C', 'OLIG1', 'YIPF7', 'TPTE', 'IQCJ', 'OTOL1', 'IZUMO1R', 'LIPN', 'PRDM14', 'CYLC2', 'OR10H2', 'FAM27L', 'LRRTM1', 'OLAH', 'PRKAG3', 'HOXC12', 'PSG11', 'LOC285847', 'TARM1', 'DNTT', 'XAGE3', 'ALPPL2', 'FTMT', 'TCEB3C', 'FRMPD4', 'RHAG', 'SNORD115-26', 'GUCY2EP', 'KRTAP10-7', 'NANOS2', 'KRTAP10-1', 'SCN1A', 'KRT85', 'DEFB110', 'DAW1', 'OR4D6', 'LPO', 'BARHL2', 'OPRD1', 'DISC2', 'OR5H6', 'ABRA', 'OR5M10', 'IL17F', 'UGT2A3', 'C9ORF135', 'XKR7', 'PYDC2', 'UCMA', 'NKX1-2', 'LOC646813', 'OR1L1', 'TFF2', 'F11', 'OR6B2', 'SNORA59B', 'LCE1D', 'C20ORF166-AS1', 'PISRT1', 'TTTY15', 'C1ORF146', 'LCN9', 'TBC1D3P2', 'SNORA16B', 'FBXW12', 'MYBPC2', 'TMEM207', 'EPS8L3', 'SPATA19', 'SLC2A2', 'TTTY9B', 'TTTY8', 'ANXA8L1', 'SBSN', 'ADAM29', 'REG4', 'CHIAP2', 'ANP32D', 'GRK1', 'SPACA3', 'IGLL3P', 'CXADRP2', 'CETN1', 'IL26', 'CGB8', 'OR2M7', 'HBG2', 'FRMPD2B', 'CPLX3', 'OR4C12', 'ZNF679', 'SULT1C3', 'IVL', 'GUCY2F', 'GAGE2B', 'KRTAP21-1', 'SNORD94', 'PCGEM1', 'LMNTD1', 'MAGEA1', 'UGT1A5', 'DEFB134', 'CALR3', 'PSKH2', 'SNCB', 'FKBP6', 'PRAMEF1', 'MOGAT3', 'CYP7A1', 'POM121L2', 'CNGB1', 'GBX2', 'OR1E2', 'OR51I2', 'NYX', 'HAO1', 'LYZL1', 'OR51G2', 'NKX2-1', 'OR52E8', 'ZNF705A', 'OR5M8', 'LOC729609', 'OR6K6', 'GOLGA6L1', 'LINC00032', 'SATB2-AS1', 'ALX4', 'CCL24', 'FAM74A3', 'LINC00923', 'KCNK4', 'SNORA1', 'SNAR-F', 'SNORA84', 'TMEM88B', 'HTR3E', 'SLITRK3', 'SYCN', 'SLC25A31', 'KRTAP19-6', 'LINC00608', 'IFNA13', 'TSKS', 'SRY', 'TRHR', 'RPL3L', 'MAP3K15', 'BMP15', 'CRYGB', 'KGFLP1', 'ALLC', 'C10ORF120', 'DMRTB1', 'KRTAP2-1', 'NTS', 'INSC', 'DPPA2', 'RAX2', 'MUSK', 'CLRN1-AS1', 'TRIML1', 'TFAMP1', 'DKFZP434K028', 'FFAR1', 'KCNIP4-IT1', 'PROKR2', 'SLC6A5', 'NLRP13', 'POU6F2', 'FAM138D', 'LOC286238', 'OACYLP', 'CT47B1', 'OR1K1', 'GDPD2', 'DEFB123', 'ADGRD2', 'ANGPTL3', 'OR51F2', 'NKX2-3', 'KCNMB2', 'SLC36A3', 'CD200R1L', 'LCN1', 'MGC27382', 'MUC2', 'SPRR2E', 'LINC00520', 'MAGEA9B', 'GAGE12F', 'FOXD4L3', 'KIR3DL3', 'PTX4', 'AKR1C8P', 'CDRT15', 'GCSAML-AS1', 'LINC00575', 'IFNA7', 'LINC00479', 'HGC6.3', 'OR6A2', 'SLC10A1', 'CTRC', 'LINC00202-2', 'OR13C3', 'LINC01565', 'KRT25', 'ARL13A', 'KRTAP19-3', 'PAPOLB', 'MTVR2', 'SLC9C1', 'ADGRG4', 'IL36RN', 'LRRC30', 'KRTAP9-2', 'USP26', 'C12ORF50', 'KRT71', 'TRIM48', 'LHCGR', 'FAM71B', 'USP17L6P', 'BPIFB4', 'C6ORF10', 'OR7D4', 'LINC00303', 'USH1C', 'OCSTAMP', 'EDDM3B', 'CSN3', 'DAZ1', 'KRTAP10-6', 'OR2M4', 'DMRTC1', 'MAGEA6', 'ODF3', 'TNP1', 'AMER3', 'HULC', 'OR10W1', 'OR12D2', 'FOXR1', 'OR7G3', 'SLC17A6', 'PRB4', 'LINC01312', 'RPS4Y2', 'LINC00410', 'GUCA1C', 'KRTAP1-1', 'NKAIN3', 'NEUROD1', 'AQP2', 'XIRP2', 'CER1', 'SPOCK3', 'ACSM4', 'FAM170B', 'SPZ1', 'OR5M3', 'GKN2', 'KRTAP4-3', 'KRTAP1-5', 'FAM224B', 'ACSM2B', 'CRYGC', 'BTF3P11', 'OVCH1', 'BCYRN1', 'POTEG', 'BTN1A1', 'OR51B5', 'CHRNB3', 'GNAT3', 'FAM205A', 'LOC647859', 'HTR1A', 'PTH2', 'CALCB', 'SLC5A8', 'SLC5A7', 'OR1L4', 'LINC00304', 'TDH', 'HBE1', 'DMP1', 'MAGEB3', 'CNTN5', 'FAM19A1', 'OR2T10', 'FAM19A4', 'OR2AG1', 'FBXO47', 'HCRTR1', 'SHH', 'KCNG4', 'PRAC1', 'OR51M1', 'NLRP8', 'SHD', 'BPIFB3', 'SPANXN3', 'AHSG', 'OR13H1', 'SSX9', 'SERPINB12', 'LOC284798', 'LINC00671', 'NUTM1', 'KRT83', 'RFX6', 'SCTR', 'NCAN', 'LINC01142', 'OR7G2', 'AATK-AS1', 'H3F3AP5', 'SLC22A10', 'KRTAP11-1', 'FAM138B', 'C2ORF27B', 'GPHA2', 'DSCR10', 'CRISP2', 'UROC1', 'PPP1R2P9', 'DCT', 'PRL', 'POU4F2', 'HTR2C', 'NYAP2', 'SNORA76C', 'AVP', 'OR2G6', 'PTCHD3', 'AADACL3', 'TMEM14E', 'CLEC4G', 'HIST1H3A', 'PCP4', 'PPY2P', 'UGT1A4', 'GPR22', 'OR5H2', 'AIRE', 'KLRC4', 'OR2L8', 'AKR1D1', 'KCNJ16', 'TRIM75P', 'TRIM55', 'ARL14', 'CPA2', 'NF1P2', 'ISL1', 'ASB15', 'SPATA22', 'SPATA3', 'SSTR3', 'HIST2H2AB', 'OR2A14', 'LINC00207', 'IFNW1', 'SPATA45', 'CNGA2', 'POU4F3', 'SLC22A13', 'C16ORF90', 'GFI1B', 'APCS', 'C6ORF118', 'LOC145845', 'SNORA71B', 'SNORA62', 'PPAN-P2RY11', 'PCDH8', 'SNORA80E', 'FOXE3', 'NXPE1', 'UGT2B10', 'DEFB131', 'CACNG7', 'PRO0611', 'DEFB118', 'PCSK2', 'USP50', 'FAM170A', 'GNAS-AS1', 'LOC392196', 'ZFY', 'LOC400794', 'C1ORF140', 'CT47A6', 'MYH16', 'MIR1-1HG', 'C1ORF94', 'CGB2', 'CT47A7', 'MYL2', 'TMEM132D', 'CA4', 'MAGEA12', 'IGLL1', 'SLC4A9', 'LOC100132831', 'LRRC74A', 'OR10AD1', 'OR4D10', 'CALHM3', 'GH2', 'TDRG1', 'HPVC1', 'TMPRSS11B', 'HBM', 'SLC39A12', 'SLC22A12', 'IFNL1', 'RAPGEF4-AS1', 'ANKRD34C', 'ART1', 'GABRB1', 'OR2A12', 'DNAJC25-GNG10', 'LINC00710', 'ASB10', 'OR2A2', 'ZFAT-AS1', 'LINC00691', 'SH2D7', 'LINC01591', 'LINC00452', 'SCGB3A2', 'FAM47C', 'CSNK1A1P1', 'PRR32', 'SNORA72', 'GPR139', 'NEUROD6', 'KRTAP6-2', 'OR5B17', 'PDX1', 'ADRB3', 'GBA3', 'MTNR1A', 'GPR50', 'SPRR1B', 'MUC13', 'GPR61', 'KRTAP12-1', 'GSC2', 'GPRC6A', 'ANKRD20A20P', 'TRPM3', 'FERD3L', 'VIL1', 'CST9L', 'APOA5', 'NEUROG1', 'B4GALNT2', 'SNORA27', 'LHFPL4', 'C11ORF87', 'PRAMEF16', 'OR51L1', 'NKX6-2', 'SNORA2B', 'PRDM9', 'BANF2', 'PRSS1', 'PRSS57', 'OR51T1', 'VWA5B1', 'ZSCAN10', 'TKTL1', 'VSTM5', 'OTOP1', 'PRSS48', 'PAEP', 'SERPINB11', 'LINC00336', 'SPINK14', 'SNORA16A', 'RAET1L', 'SST', 'SSX2', 'CDHR5', 'NPSR1-AS1', 'C4ORF50', 'FOXG1', 'B3GALT1', 'TMEM252', 'PSAPL1', 'GOLGA2P6', 'PACRG-AS1', 'INS-IGF2', 'ZG16', 'MT1B', 'BET1P1', 'ITPK1-AS1', 'HYMAI', 'NHLH2', 'FAM71E2', 'FEZF1', 'OR52K2', 'NPY', 'MEP1A', 'OR2T2', 'SYT14P1', 'ADGRE3', 'OR3A2', 'SCARNA8', 'TRIM49', 'TRIM49D2', 'CLLU1', 'MAGEA11', 'OR2K2', 'BAGE', 'C9ORF171', 'NPSR1', 'CLEC4M', 'GJB4', 'ACTL7B', 'LINC00244', 'CPN1', 'OTC', 'CTRB2', 'FRMPD2', 'C1ORF158', 'SPINT3', 'GCGR', 'OR4D1', 'SNORA67', 'GCKR', 'C17ORF78', 'SNORA38', 'NPPC', 'MBL2', 'KLK13', 'KRTAP3-2', 'TAS2R42', 'CCER1', 'RNF222', 'SLCO1A2', 'DACH2', 'IFNL2', 'CACNG3', 'PASD1', 'LOC100130264', 'IL13', 'FER1L6', 'DMRTC2', 'CYP1A2', 'OPRM1', 'OR12D3', 'FAM9B', 'FRG2DP', 'CMTM5', 'TNP2', 'TP53TG5', 'LINC00964', 'CHRNA9', 'MAS1L', 'CCDC54', 'F2', 'C12ORF56', 'CLRN1', 'S100A12', 'OR5M1', 'CYP2A7', 'OR5K1', 'POU4F1', 'ATOH7', 'VCX3A', 'MYADML', 'SLITRK1', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 2.5243846805667592e-15 NRMSE: 5.893688551939576e-16 MAPE: 2.6515137976908365e-12 Pearson Correlation: 0.07033235088197373 Spearman Correlation: 0.10868215314405417 Coefficient of Determination: -1.4637484682439914 RMSE: 1.0305289039422132 NRMSE: 0.3181528523176849 MAPE: 311.3506025494676 Predictor: ElasticNet Pearson Correlation: 0.9092321983691019 Spearman Correlation: 0.8897420080618761 Coefficient of Determination: 0.7954206088343118 RMSE: 0.3019531079355593 NRMSE: 0.07049708347393521 MAPE: 174.64289914229016 Pearson Correlation: 0.4145713854888592 Spearman Correlation: 0.3337323408022544 Coefficient of Determination: 0.1506993844742771 RMSE: 0.6050520169663821 NRMSE: 0.1867963375525245 MAPE: 153.67267653155574 Predictor: RandomForests Pearson Correlation: 0.6643898821488093 Spearman Correlation: 0.577836178607283 Coefficient of Determination: 0.4344156321372118 RMSE: 0.5020618961055764 NRMSE: 0.11721654279640839 MAPE: 199.52458690696415 Pearson Correlation: 0.5944288833823963 Spearman Correlation: 0.5561026702602513 Coefficient of Determination: 0.3486877278129289 RMSE: 0.5298544965351406 NRMSE: 0.16358077754164446 MAPE: 102.74731973872422 Protein: TP53 x_train_column_count: 1053 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'LINC00200', 'OR52B4', 'OR4F15', 'OR8J3', 'HTR5A', 'DAZL', 'RAB9BP1', 'SNORA32', 'C10ORF53', 'KRTAP19-8', 'IFNA16', 'OR2L2', 'TGIF2LX', 'F13B', 'FAM71A', 'OR11L1', 'OR9A2', 'OR8B3', 'TXLNGY', 'ZCCHC13', 'HBG1', 'OR2M3', 'GUCA2B', 'CLEC6A', 'NXF2B', 'OR10V1', 'OR10A5', 'SNORA51', 'OTX2', 'GRIN2B', 'TMPRSS11F', 'WFDC5', 'IL31', 'OR8S1', 'FGF23', 'OR5H14', 'HMHB1', 'PSG7', 'C18ORF42', 'LINC00895', 'MS4A6E', 'PPY', 'GOLGA6D', 'SCGB1C1', 'NOX3', 'KRTAP10-12', 'OR1N1', 'ASB17', 'ADAM18', 'ITLN2', 'RPL13AP17', 'OR1S2', 'KRTAP10-11', 'VWC2L', 'OR2G2', 'OR8G5', 'TAAR9', 'BRDTP1', 'PLG', 'SSX5', 'LEUTX', 'OR4D9', 'PWAR4', 'CRYAA', 'MAGEA10', 'TTTY14', 'TPD52L3', 'HIST1H4F', 'LINC01205', 'GDNF', 'SNORA34', 'CAPZA3', 'POTED', 'GPR52', 'MMP23A', 'LINC00636', 'ARSF', 'TCP10L2', 'SNORD89', 'XAGE5', 'C2ORF83', 'KRTAP12-2', 'COL6A4P1', 'TSGA13', 'LOC391343', 'ALOX12B', 'BTNL3', 'LOC391003', 'CYP11B2', 'CFHR4', 'SNORA70B', 'SFTA3', 'FAM27B', 'FMR1NB', 'HBD', 'RSPH6A', 'OR5T2', 'ANKUB1', 'OR4S1', 'BPIFA3', 'TRIM51', 'CYP2W1', 'OR9G4', 'CASC8', 'OPN1MW', 'SLC38A8', 'SSX8', 'ACTR3BP2', 'PROKR1', 'FOXN3-AS2', 'ARR3', 'OR56A1', 'ACTRT2', 'INSM2', 'P2RX3', 'ARHGAP36', 'HNRNPCL1', 'TBC1D28', 'DMRT1', 'SDR16C6P', 'LINC00469', 'TAS2R60', 'STATH', 'KHDC1L', 'LINC00111', 'SLC13A1', 'ANKRD18DP', 'PF4', 'POTEH', 'C11ORF94', 'RESP18', 'EDDM3A', 'RTP2', 'DAOA', 'ASB18', 'C20ORF173', 'TKTL2', 'ADGRG7', 'OR4C16', 'DEFB126', 'DEFB129', 'GAGE1', 'OR4F5', 'ZIM3', 'IFITM5', 'OR6Y1', 'OR7A17', 'LINC00114', 'SPACA7', 'DUXA', 'OR6B3', 'DEFB104A', 'LHX9', 'SOX3', 'YWHAEP7', 'OR8H2', 'LGI3', 'FAM169B', 'PRAMEF20', 'CTRB1', 'LINC01566', 'KRTAP19-2', 'RGS8', 'MYBPHL', 'KRTAP6-1', 'KRTAP25-1', 'TRPV5', 'LINC00523', 'WFDC8', 'TCP10', 'GAGE2D', 'KCNQ1DN', 'TAS2R13', 'CPLX4', 'OR52H1', 'CLRN2', 'TMEM72', 'HSFY2', 'OR2T35', 'SFTPC', 'OR4K17', 'KRTAP13-1', 'SPANXA2', 'CCKAR', 'MYF5', 'TMEM202', 'GABRG3', 'AVPR1B', 'OR4K2', 'FCAMR', 'ASAP1-IT1', 'INS', 'CGB5', 'MMD2', 'CNTNAP4', 'LCNL1', 'FDCSP', 'KLK9', 'OLFM3', 'GH1', 'MAGEB6', 'CCDC166', 'LINC01101', 'SPDYC', 'MBD3L5', 'CRNN', 'LINC00113', 'CRLF2', 'NEU2', 'BEND2', 'HPD', 'OR8G2', 'OR14I1', 'SVOP', 'FAM71C', 'OLIG1', 'YIPF7', 'TPTE', 'IQCJ', 'OTOL1', 'IZUMO1R', 'LIPN', 'PRDM14', 'CYLC2', 'OR10H2', 'FAM27L', 'LRRTM1', 'OLAH', 'PRKAG3', 'HOXC12', 'PSG11', 'LOC285847', 'TARM1', 'DNTT', 'XAGE3', 'ALPPL2', 'FTMT', 'TCEB3C', 'FRMPD4', 'RHAG', 'SNORD115-26', 'GUCY2EP', 'KRTAP10-7', 'NANOS2', 'KRTAP10-1', 'SCN1A', 'KRT85', 'DEFB110', 'DAW1', 'OR4D6', 'LPO', 'BARHL2', 'OPRD1', 'DISC2', 'OR5H6', 'ABRA', 'OR5M10', 'IL17F', 'UGT2A3', 'C9ORF135', 'XKR7', 'PYDC2', 'UCMA', 'NKX1-2', 'LOC646813', 'OR1L1', 'TFF2', 'F11', 'OR6B2', 'SNORA59B', 'LCE1D', 'C20ORF166-AS1', 'PISRT1', 'TTTY15', 'C1ORF146', 'LCN9', 'TBC1D3P2', 'SNORA16B', 'FBXW12', 'MYBPC2', 'TMEM207', 'EPS8L3', 'SPATA19', 'SLC2A2', 'TTTY9B', 'TTTY8', 'ANXA8L1', 'SBSN', 'ADAM29', 'REG4', 'CHIAP2', 'ANP32D', 'GRK1', 'SPACA3', 'IGLL3P', 'CXADRP2', 'CETN1', 'IL26', 'CGB8', 'OR2M7', 'HBG2', 'FRMPD2B', 'CPLX3', 'OR4C12', 'ZNF679', 'SULT1C3', 'IVL', 'GUCY2F', 'GAGE2B', 'KRTAP21-1', 'SNORD94', 'PCGEM1', 'LMNTD1', 'MAGEA1', 'UGT1A5', 'DEFB134', 'CALR3', 'PSKH2', 'SNCB', 'FKBP6', 'PRAMEF1', 'MOGAT3', 'CYP7A1', 'POM121L2', 'CNGB1', 'GBX2', 'OR1E2', 'OR51I2', 'NYX', 'HAO1', 'LYZL1', 'OR51G2', 'NKX2-1', 'OR52E8', 'ZNF705A', 'OR5M8', 'LOC729609', 'OR6K6', 'GOLGA6L1', 'LINC00032', 'SATB2-AS1', 'ALX4', 'CCL24', 'FAM74A3', 'LINC00923', 'KCNK4', 'SNORA1', 'SNAR-F', 'SNORA84', 'TMEM88B', 'HTR3E', 'SLITRK3', 'SYCN', 'SLC25A31', 'KRTAP19-6', 'LINC00608', 'IFNA13', 'TSKS', 'SRY', 'TRHR', 'RPL3L', 'MAP3K15', 'BMP15', 'CRYGB', 'KGFLP1', 'ALLC', 'C10ORF120', 'DMRTB1', 'KRTAP2-1', 'NTS', 'INSC', 'DPPA2', 'RAX2', 'MUSK', 'CLRN1-AS1', 'TRIML1', 'TFAMP1', 'DKFZP434K028', 'FFAR1', 'KCNIP4-IT1', 'PROKR2', 'SLC6A5', 'NLRP13', 'POU6F2', 'FAM138D', 'LOC286238', 'OACYLP', 'CT47B1', 'OR1K1', 'GDPD2', 'DEFB123', 'ADGRD2', 'ANGPTL3', 'OR51F2', 'NKX2-3', 'KCNMB2', 'SLC36A3', 'CD200R1L', 'LCN1', 'MGC27382', 'MUC2', 'SPRR2E', 'LINC00520', 'MAGEA9B', 'GAGE12F', 'FOXD4L3', 'KIR3DL3', 'PTX4', 'AKR1C8P', 'CDRT15', 'GCSAML-AS1', 'LINC00575', 'IFNA7', 'LINC00479', 'HGC6.3', 'OR6A2', 'SLC10A1', 'CTRC', 'LINC00202-2', 'OR13C3', 'LINC01565', 'KRT25', 'ARL13A', 'KRTAP19-3', 'PAPOLB', 'MTVR2', 'SLC9C1', 'ADGRG4', 'IL36RN', 'LRRC30', 'KRTAP9-2', 'USP26', 'C12ORF50', 'KRT71', 'TRIM48', 'LHCGR', 'FAM71B', 'USP17L6P', 'BPIFB4', 'C6ORF10', 'OR7D4', 'LINC00303', 'USH1C', 'OCSTAMP', 'EDDM3B', 'CSN3', 'DAZ1', 'KRTAP10-6', 'OR2M4', 'DMRTC1', 'MAGEA6', 'ODF3', 'TNP1', 'AMER3', 'HULC', 'OR10W1', 'OR12D2', 'FOXR1', 'OR7G3', 'SLC17A6', 'PRB4', 'LINC01312', 'RPS4Y2', 'LINC00410', 'GUCA1C', 'KRTAP1-1', 'NKAIN3', 'NEUROD1', 'AQP2', 'XIRP2', 'CER1', 'SPOCK3', 'ACSM4', 'FAM170B', 'SPZ1', 'OR5M3', 'GKN2', 'KRTAP4-3', 'KRTAP1-5', 'FAM224B', 'ACSM2B', 'CRYGC', 'BTF3P11', 'OVCH1', 'BCYRN1', 'POTEG', 'BTN1A1', 'OR51B5', 'CHRNB3', 'GNAT3', 'FAM205A', 'LOC647859', 'HTR1A', 'PTH2', 'CALCB', 'SLC5A8', 'SLC5A7', 'OR1L4', 'LINC00304', 'TDH', 'HBE1', 'DMP1', 'MAGEB3', 'CNTN5', 'FAM19A1', 'OR2T10', 'FAM19A4', 'OR2AG1', 'FBXO47', 'HCRTR1', 'SHH', 'KCNG4', 'PRAC1', 'OR51M1', 'NLRP8', 'SHD', 'BPIFB3', 'SPANXN3', 'AHSG', 'OR13H1', 'SSX9', 'SERPINB12', 'LOC284798', 'LINC00671', 'NUTM1', 'KRT83', 'RFX6', 'SCTR', 'NCAN', 'LINC01142', 'OR7G2', 'AATK-AS1', 'H3F3AP5', 'SLC22A10', 'KRTAP11-1', 'FAM138B', 'C2ORF27B', 'GPHA2', 'DSCR10', 'CRISP2', 'UROC1', 'PPP1R2P9', 'DCT', 'PRL', 'POU4F2', 'HTR2C', 'NYAP2', 'SNORA76C', 'AVP', 'OR2G6', 'PTCHD3', 'AADACL3', 'TMEM14E', 'CLEC4G', 'HIST1H3A', 'PCP4', 'PPY2P', 'UGT1A4', 'GPR22', 'OR5H2', 'AIRE', 'KLRC4', 'OR2L8', 'AKR1D1', 'KCNJ16', 'TRIM75P', 'TRIM55', 'ARL14', 'CPA2', 'NF1P2', 'ISL1', 'ASB15', 'SPATA22', 'SPATA3', 'SSTR3', 'HIST2H2AB', 'OR2A14', 'LINC00207', 'IFNW1', 'SPATA45', 'CNGA2', 'POU4F3', 'SLC22A13', 'C16ORF90', 'GFI1B', 'APCS', 'C6ORF118', 'LOC145845', 'SNORA71B', 'SNORA62', 'PPAN-P2RY11', 'PCDH8', 'SNORA80E', 'FOXE3', 'NXPE1', 'UGT2B10', 'DEFB131', 'CACNG7', 'PRO0611', 'DEFB118', 'PCSK2', 'USP50', 'FAM170A', 'GNAS-AS1', 'LOC392196', 'ZFY', 'LOC400794', 'C1ORF140', 'CT47A6', 'MYH16', 'MIR1-1HG', 'C1ORF94', 'CGB2', 'CT47A7', 'MYL2', 'TMEM132D', 'CA4', 'MAGEA12', 'IGLL1', 'SLC4A9', 'LOC100132831', 'LRRC74A', 'OR10AD1', 'OR4D10', 'CALHM3', 'GH2', 'TDRG1', 'HPVC1', 'TMPRSS11B', 'HBM', 'SLC39A12', 'SLC22A12', 'IFNL1', 'RAPGEF4-AS1', 'ANKRD34C', 'ART1', 'GABRB1', 'OR2A12', 'DNAJC25-GNG10', 'LINC00710', 'ASB10', 'OR2A2', 'ZFAT-AS1', 'LINC00691', 'SH2D7', 'LINC01591', 'LINC00452', 'SCGB3A2', 'FAM47C', 'CSNK1A1P1', 'PRR32', 'SNORA72', 'GPR139', 'NEUROD6', 'KRTAP6-2', 'OR5B17', 'PDX1', 'ADRB3', 'GBA3', 'MTNR1A', 'GPR50', 'SPRR1B', 'MUC13', 'GPR61', 'KRTAP12-1', 'GSC2', 'GPRC6A', 'ANKRD20A20P', 'TRPM3', 'FERD3L', 'VIL1', 'CST9L', 'APOA5', 'NEUROG1', 'B4GALNT2', 'SNORA27', 'LHFPL4', 'C11ORF87', 'PRAMEF16', 'OR51L1', 'NKX6-2', 'SNORA2B', 'PRDM9', 'BANF2', 'PRSS1', 'PRSS57', 'OR51T1', 'VWA5B1', 'ZSCAN10', 'TKTL1', 'VSTM5', 'OTOP1', 'PRSS48', 'PAEP', 'SERPINB11', 'LINC00336', 'SPINK14', 'SNORA16A', 'RAET1L', 'SST', 'SSX2', 'CDHR5', 'NPSR1-AS1', 'C4ORF50', 'FOXG1', 'B3GALT1', 'TMEM252', 'PSAPL1', 'GOLGA2P6', 'PACRG-AS1', 'INS-IGF2', 'ZG16', 'MT1B', 'BET1P1', 'ITPK1-AS1', 'HYMAI', 'NHLH2', 'FAM71E2', 'FEZF1', 'OR52K2', 'NPY', 'MEP1A', 'OR2T2', 'SYT14P1', 'ADGRE3', 'OR3A2', 'SCARNA8', 'TRIM49', 'TRIM49D2', 'CLLU1', 'MAGEA11', 'OR2K2', 'BAGE', 'C9ORF171', 'NPSR1', 'CLEC4M', 'GJB4', 'ACTL7B', 'LINC00244', 'CPN1', 'OTC', 'CTRB2', 'FRMPD2', 'C1ORF158', 'SPINT3', 'GCGR', 'OR4D1', 'SNORA67', 'GCKR', 'C17ORF78', 'SNORA38', 'NPPC', 'MBL2', 'KLK13', 'KRTAP3-2', 'TAS2R42', 'CCER1', 'RNF222', 'SLCO1A2', 'DACH2', 'IFNL2', 'CACNG3', 'PASD1', 'LOC100130264', 'IL13', 'FER1L6', 'DMRTC2', 'CYP1A2', 'OPRM1', 'OR12D3', 'FAM9B', 'FRG2DP', 'CMTM5', 'TNP2', 'TP53TG5', 'LINC00964', 'CHRNA9', 'MAS1L', 'CCDC54', 'F2', 'C12ORF56', 'CLRN1', 'S100A12', 'OR5M1', 'CYP2A7', 'OR5K1', 'POU4F1', 'ATOH7', 'VCX3A', 'MYADML', 'SLITRK1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.832002186906911e-15 NRMSE: 4.4027930471206706e-16 MAPE: 6.545408443832372e-12 Pearson Correlation: 0.16545161345120193 Spearman Correlation: 0.08004837965560668 Coefficient of Determination: -1.0673370606097579 RMSE: 0.6189088313450309 NRMSE: 0.2307905952384619 MAPE: 915.3536634574035 Predictor: ElasticNet Pearson Correlation: 0.8748082779178036 Spearman Correlation: 0.800564542842555 Coefficient of Determination: 0.7240062754665688 RMSE: 0.236467234678122 NRMSE: 0.056829424339851484 MAPE: 476.4810015979293 Pearson Correlation: 0.3721620933199065 Spearman Correlation: 0.3661915983989826 Coefficient of Determination: 0.12479197740589232 RMSE: 0.40269541019148625 NRMSE: 0.15016478794770693 MAPE: 453.65213563624394 Predictor: RandomForests Pearson Correlation: 0.6644503413671478 Spearman Correlation: 0.544360907093898 Coefficient of Determination: 0.37944533660549906 RMSE: 0.35457767729180817 NRMSE: 0.08521453431670468 MAPE: 500.36145296381795 Pearson Correlation: 0.44740685341985637 Spearman Correlation: 0.38969409967952806 Coefficient of Determination: 0.18500512890703014 RMSE: 0.3885961311948405 NRMSE: 0.1449071783818564 MAPE: 369.7703007666136 Protein: CTNNB1 x_train_column_count: 1053 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'LINC00200', 'OR52B4', 'OR4F15', 'OR8J3', 'HTR5A', 'DAZL', 'RAB9BP1', 'SNORA32', 'C10ORF53', 'KRTAP19-8', 'IFNA16', 'OR2L2', 'TGIF2LX', 'F13B', 'FAM71A', 'OR11L1', 'OR9A2', 'OR8B3', 'TXLNGY', 'ZCCHC13', 'HBG1', 'OR2M3', 'GUCA2B', 'CLEC6A', 'NXF2B', 'OR10V1', 'OR10A5', 'SNORA51', 'OTX2', 'GRIN2B', 'TMPRSS11F', 'WFDC5', 'IL31', 'OR8S1', 'FGF23', 'OR5H14', 'HMHB1', 'PSG7', 'C18ORF42', 'LINC00895', 'MS4A6E', 'PPY', 'GOLGA6D', 'SCGB1C1', 'NOX3', 'KRTAP10-12', 'OR1N1', 'ASB17', 'ADAM18', 'ITLN2', 'RPL13AP17', 'OR1S2', 'KRTAP10-11', 'VWC2L', 'OR2G2', 'OR8G5', 'TAAR9', 'BRDTP1', 'PLG', 'SSX5', 'LEUTX', 'OR4D9', 'PWAR4', 'CRYAA', 'MAGEA10', 'TTTY14', 'TPD52L3', 'HIST1H4F', 'LINC01205', 'GDNF', 'SNORA34', 'CAPZA3', 'POTED', 'GPR52', 'MMP23A', 'LINC00636', 'ARSF', 'TCP10L2', 'SNORD89', 'XAGE5', 'C2ORF83', 'KRTAP12-2', 'COL6A4P1', 'TSGA13', 'LOC391343', 'ALOX12B', 'BTNL3', 'LOC391003', 'CYP11B2', 'CFHR4', 'SNORA70B', 'SFTA3', 'FAM27B', 'FMR1NB', 'HBD', 'RSPH6A', 'OR5T2', 'ANKUB1', 'OR4S1', 'BPIFA3', 'TRIM51', 'CYP2W1', 'OR9G4', 'CASC8', 'OPN1MW', 'SLC38A8', 'SSX8', 'ACTR3BP2', 'PROKR1', 'FOXN3-AS2', 'ARR3', 'OR56A1', 'ACTRT2', 'INSM2', 'P2RX3', 'ARHGAP36', 'HNRNPCL1', 'TBC1D28', 'DMRT1', 'SDR16C6P', 'LINC00469', 'TAS2R60', 'STATH', 'KHDC1L', 'LINC00111', 'SLC13A1', 'ANKRD18DP', 'PF4', 'POTEH', 'C11ORF94', 'RESP18', 'EDDM3A', 'RTP2', 'DAOA', 'ASB18', 'C20ORF173', 'TKTL2', 'ADGRG7', 'OR4C16', 'DEFB126', 'DEFB129', 'GAGE1', 'OR4F5', 'ZIM3', 'IFITM5', 'OR6Y1', 'OR7A17', 'LINC00114', 'SPACA7', 'DUXA', 'OR6B3', 'DEFB104A', 'LHX9', 'SOX3', 'YWHAEP7', 'OR8H2', 'LGI3', 'FAM169B', 'PRAMEF20', 'CTRB1', 'LINC01566', 'KRTAP19-2', 'RGS8', 'MYBPHL', 'KRTAP6-1', 'KRTAP25-1', 'TRPV5', 'LINC00523', 'WFDC8', 'TCP10', 'GAGE2D', 'KCNQ1DN', 'TAS2R13', 'CPLX4', 'OR52H1', 'CLRN2', 'TMEM72', 'HSFY2', 'OR2T35', 'SFTPC', 'OR4K17', 'KRTAP13-1', 'SPANXA2', 'CCKAR', 'MYF5', 'TMEM202', 'GABRG3', 'AVPR1B', 'OR4K2', 'FCAMR', 'ASAP1-IT1', 'INS', 'CGB5', 'MMD2', 'CNTNAP4', 'LCNL1', 'FDCSP', 'KLK9', 'OLFM3', 'GH1', 'MAGEB6', 'CCDC166', 'LINC01101', 'SPDYC', 'MBD3L5', 'CRNN', 'LINC00113', 'CRLF2', 'NEU2', 'BEND2', 'HPD', 'OR8G2', 'OR14I1', 'SVOP', 'FAM71C', 'OLIG1', 'YIPF7', 'TPTE', 'IQCJ', 'OTOL1', 'IZUMO1R', 'LIPN', 'PRDM14', 'CYLC2', 'OR10H2', 'FAM27L', 'LRRTM1', 'OLAH', 'PRKAG3', 'HOXC12', 'PSG11', 'LOC285847', 'TARM1', 'DNTT', 'XAGE3', 'ALPPL2', 'FTMT', 'TCEB3C', 'FRMPD4', 'RHAG', 'SNORD115-26', 'GUCY2EP', 'KRTAP10-7', 'NANOS2', 'KRTAP10-1', 'SCN1A', 'KRT85', 'DEFB110', 'DAW1', 'OR4D6', 'LPO', 'BARHL2', 'OPRD1', 'DISC2', 'OR5H6', 'ABRA', 'OR5M10', 'IL17F', 'UGT2A3', 'C9ORF135', 'XKR7', 'PYDC2', 'UCMA', 'NKX1-2', 'LOC646813', 'OR1L1', 'TFF2', 'F11', 'OR6B2', 'SNORA59B', 'LCE1D', 'C20ORF166-AS1', 'PISRT1', 'TTTY15', 'C1ORF146', 'LCN9', 'TBC1D3P2', 'SNORA16B', 'FBXW12', 'MYBPC2', 'TMEM207', 'EPS8L3', 'SPATA19', 'SLC2A2', 'TTTY9B', 'TTTY8', 'ANXA8L1', 'SBSN', 'ADAM29', 'REG4', 'CHIAP2', 'ANP32D', 'GRK1', 'SPACA3', 'IGLL3P', 'CXADRP2', 'CETN1', 'IL26', 'CGB8', 'OR2M7', 'HBG2', 'FRMPD2B', 'CPLX3', 'OR4C12', 'ZNF679', 'SULT1C3', 'IVL', 'GUCY2F', 'GAGE2B', 'KRTAP21-1', 'SNORD94', 'PCGEM1', 'LMNTD1', 'MAGEA1', 'UGT1A5', 'DEFB134', 'CALR3', 'PSKH2', 'SNCB', 'FKBP6', 'PRAMEF1', 'MOGAT3', 'CYP7A1', 'POM121L2', 'CNGB1', 'GBX2', 'OR1E2', 'OR51I2', 'NYX', 'HAO1', 'LYZL1', 'OR51G2', 'NKX2-1', 'OR52E8', 'ZNF705A', 'OR5M8', 'LOC729609', 'OR6K6', 'GOLGA6L1', 'LINC00032', 'SATB2-AS1', 'ALX4', 'CCL24', 'FAM74A3', 'LINC00923', 'KCNK4', 'SNORA1', 'SNAR-F', 'SNORA84', 'TMEM88B', 'HTR3E', 'SLITRK3', 'SYCN', 'SLC25A31', 'KRTAP19-6', 'LINC00608', 'IFNA13', 'TSKS', 'SRY', 'TRHR', 'RPL3L', 'MAP3K15', 'BMP15', 'CRYGB', 'KGFLP1', 'ALLC', 'C10ORF120', 'DMRTB1', 'KRTAP2-1', 'NTS', 'INSC', 'DPPA2', 'RAX2', 'MUSK', 'CLRN1-AS1', 'TRIML1', 'TFAMP1', 'DKFZP434K028', 'FFAR1', 'KCNIP4-IT1', 'PROKR2', 'SLC6A5', 'NLRP13', 'POU6F2', 'FAM138D', 'LOC286238', 'OACYLP', 'CT47B1', 'OR1K1', 'GDPD2', 'DEFB123', 'ADGRD2', 'ANGPTL3', 'OR51F2', 'NKX2-3', 'KCNMB2', 'SLC36A3', 'CD200R1L', 'LCN1', 'MGC27382', 'MUC2', 'SPRR2E', 'LINC00520', 'MAGEA9B', 'GAGE12F', 'FOXD4L3', 'KIR3DL3', 'PTX4', 'AKR1C8P', 'CDRT15', 'GCSAML-AS1', 'LINC00575', 'IFNA7', 'LINC00479', 'HGC6.3', 'OR6A2', 'SLC10A1', 'CTRC', 'LINC00202-2', 'OR13C3', 'LINC01565', 'KRT25', 'ARL13A', 'KRTAP19-3', 'PAPOLB', 'MTVR2', 'SLC9C1', 'ADGRG4', 'IL36RN', 'LRRC30', 'KRTAP9-2', 'USP26', 'C12ORF50', 'KRT71', 'TRIM48', 'LHCGR', 'FAM71B', 'USP17L6P', 'BPIFB4', 'C6ORF10', 'OR7D4', 'LINC00303', 'USH1C', 'OCSTAMP', 'EDDM3B', 'CSN3', 'DAZ1', 'KRTAP10-6', 'OR2M4', 'DMRTC1', 'MAGEA6', 'ODF3', 'TNP1', 'AMER3', 'HULC', 'OR10W1', 'OR12D2', 'FOXR1', 'OR7G3', 'SLC17A6', 'PRB4', 'LINC01312', 'RPS4Y2', 'LINC00410', 'GUCA1C', 'KRTAP1-1', 'NKAIN3', 'NEUROD1', 'AQP2', 'XIRP2', 'CER1', 'SPOCK3', 'ACSM4', 'FAM170B', 'SPZ1', 'OR5M3', 'GKN2', 'KRTAP4-3', 'KRTAP1-5', 'FAM224B', 'ACSM2B', 'CRYGC', 'BTF3P11', 'OVCH1', 'BCYRN1', 'POTEG', 'BTN1A1', 'OR51B5', 'CHRNB3', 'GNAT3', 'FAM205A', 'LOC647859', 'HTR1A', 'PTH2', 'CALCB', 'SLC5A8', 'SLC5A7', 'OR1L4', 'LINC00304', 'TDH', 'HBE1', 'DMP1', 'MAGEB3', 'CNTN5', 'FAM19A1', 'OR2T10', 'FAM19A4', 'OR2AG1', 'FBXO47', 'HCRTR1', 'SHH', 'KCNG4', 'PRAC1', 'OR51M1', 'NLRP8', 'SHD', 'BPIFB3', 'SPANXN3', 'AHSG', 'OR13H1', 'SSX9', 'SERPINB12', 'LOC284798', 'LINC00671', 'NUTM1', 'KRT83', 'RFX6', 'SCTR', 'NCAN', 'LINC01142', 'OR7G2', 'AATK-AS1', 'H3F3AP5', 'SLC22A10', 'KRTAP11-1', 'FAM138B', 'C2ORF27B', 'GPHA2', 'DSCR10', 'CRISP2', 'UROC1', 'PPP1R2P9', 'DCT', 'PRL', 'POU4F2', 'HTR2C', 'NYAP2', 'SNORA76C', 'AVP', 'OR2G6', 'PTCHD3', 'AADACL3', 'TMEM14E', 'CLEC4G', 'HIST1H3A', 'PCP4', 'PPY2P', 'UGT1A4', 'GPR22', 'OR5H2', 'AIRE', 'KLRC4', 'OR2L8', 'AKR1D1', 'KCNJ16', 'TRIM75P', 'TRIM55', 'ARL14', 'CPA2', 'NF1P2', 'ISL1', 'ASB15', 'SPATA22', 'SPATA3', 'SSTR3', 'HIST2H2AB', 'OR2A14', 'LINC00207', 'IFNW1', 'SPATA45', 'CNGA2', 'POU4F3', 'SLC22A13', 'C16ORF90', 'GFI1B', 'APCS', 'C6ORF118', 'LOC145845', 'SNORA71B', 'SNORA62', 'PPAN-P2RY11', 'PCDH8', 'SNORA80E', 'FOXE3', 'NXPE1', 'UGT2B10', 'DEFB131', 'CACNG7', 'PRO0611', 'DEFB118', 'PCSK2', 'USP50', 'FAM170A', 'GNAS-AS1', 'LOC392196', 'ZFY', 'LOC400794', 'C1ORF140', 'CT47A6', 'MYH16', 'MIR1-1HG', 'C1ORF94', 'CGB2', 'CT47A7', 'MYL2', 'TMEM132D', 'CA4', 'MAGEA12', 'IGLL1', 'SLC4A9', 'LOC100132831', 'LRRC74A', 'OR10AD1', 'OR4D10', 'CALHM3', 'GH2', 'TDRG1', 'HPVC1', 'TMPRSS11B', 'HBM', 'SLC39A12', 'SLC22A12', 'IFNL1', 'RAPGEF4-AS1', 'ANKRD34C', 'ART1', 'GABRB1', 'OR2A12', 'DNAJC25-GNG10', 'LINC00710', 'ASB10', 'OR2A2', 'ZFAT-AS1', 'LINC00691', 'SH2D7', 'LINC01591', 'LINC00452', 'SCGB3A2', 'FAM47C', 'CSNK1A1P1', 'PRR32', 'SNORA72', 'GPR139', 'NEUROD6', 'KRTAP6-2', 'OR5B17', 'PDX1', 'ADRB3', 'GBA3', 'MTNR1A', 'GPR50', 'SPRR1B', 'MUC13', 'GPR61', 'KRTAP12-1', 'GSC2', 'GPRC6A', 'ANKRD20A20P', 'TRPM3', 'FERD3L', 'VIL1', 'CST9L', 'APOA5', 'NEUROG1', 'B4GALNT2', 'SNORA27', 'LHFPL4', 'C11ORF87', 'PRAMEF16', 'OR51L1', 'NKX6-2', 'SNORA2B', 'PRDM9', 'BANF2', 'PRSS1', 'PRSS57', 'OR51T1', 'VWA5B1', 'ZSCAN10', 'TKTL1', 'VSTM5', 'OTOP1', 'PRSS48', 'PAEP', 'SERPINB11', 'LINC00336', 'SPINK14', 'SNORA16A', 'RAET1L', 'SST', 'SSX2', 'CDHR5', 'NPSR1-AS1', 'C4ORF50', 'FOXG1', 'B3GALT1', 'TMEM252', 'PSAPL1', 'GOLGA2P6', 'PACRG-AS1', 'INS-IGF2', 'ZG16', 'MT1B', 'BET1P1', 'ITPK1-AS1', 'HYMAI', 'NHLH2', 'FAM71E2', 'FEZF1', 'OR52K2', 'NPY', 'MEP1A', 'OR2T2', 'SYT14P1', 'ADGRE3', 'OR3A2', 'SCARNA8', 'TRIM49', 'TRIM49D2', 'CLLU1', 'MAGEA11', 'OR2K2', 'BAGE', 'C9ORF171', 'NPSR1', 'CLEC4M', 'GJB4', 'ACTL7B', 'LINC00244', 'CPN1', 'OTC', 'CTRB2', 'FRMPD2', 'C1ORF158', 'SPINT3', 'GCGR', 'OR4D1', 'SNORA67', 'GCKR', 'C17ORF78', 'SNORA38', 'NPPC', 'MBL2', 'KLK13', 'KRTAP3-2', 'TAS2R42', 'CCER1', 'RNF222', 'SLCO1A2', 'DACH2', 'IFNL2', 'CACNG3', 'PASD1', 'LOC100130264', 'IL13', 'FER1L6', 'DMRTC2', 'CYP1A2', 'OPRM1', 'OR12D3', 'FAM9B', 'FRG2DP', 'CMTM5', 'TNP2', 'TP53TG5', 'LINC00964', 'CHRNA9', 'MAS1L', 'CCDC54', 'F2', 'C12ORF56', 'CLRN1', 'S100A12', 'OR5M1', 'CYP2A7', 'OR5K1', 'POU4F1', 'ATOH7', 'VCX3A', 'MYADML', 'SLITRK1', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 0.9999999807346924 Coefficient of Determination: 1.0 RMSE: 3.1665789513353546e-15 NRMSE: 6.228518787048298e-16 MAPE: 1.543068252145602e-12 Pearson Correlation: 0.010844019549723265 Spearman Correlation: 0.07807329268444745 Coefficient of Determination: -2.6945073792858176 RMSE: 1.178196564417447 NRMSE: 0.3851700168091297 MAPE: 1125.8371604803115 Predictor: ElasticNet Pearson Correlation: 0.8957886847281182 Spearman Correlation: 0.8947538178830453 Coefficient of Determination: 0.7615890190100636 RMSE: 0.37557870288423373 NRMSE: 0.07387464651538823 MAPE: 136.5525925596509 Pearson Correlation: 0.0625878442380667 Spearman Correlation: 0.14242322223469123 Coefficient of Determination: -0.23192274988770567 RMSE: 0.6803481693481469 NRMSE: 0.22241595650336618 MAPE: 827.9910211886247 Predictor: RandomForests Pearson Correlation: 0.607194432048588 Spearman Correlation: 0.5963183033428682 Coefficient of Determination: 0.24953568153897454 RMSE: 0.66635069405492 NRMSE: 0.1310681931657986 MAPE: 334.7958998767034 Pearson Correlation: 0.03724568992909676 Spearman Correlation: 0.018905472636815922 Coefficient of Determination: -0.06457394119555171 RMSE: 0.6324517497858498 NRMSE: 0.2067579030977965 MAPE: 1111.1968978550617 Protein: CCNE1 x_train_column_count: 1053 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'LINC00200', 'OR52B4', 'OR4F15', 'OR8J3', 'HTR5A', 'DAZL', 'RAB9BP1', 'SNORA32', 'C10ORF53', 'KRTAP19-8', 'IFNA16', 'OR2L2', 'TGIF2LX', 'F13B', 'FAM71A', 'OR11L1', 'OR9A2', 'OR8B3', 'TXLNGY', 'ZCCHC13', 'HBG1', 'OR2M3', 'GUCA2B', 'CLEC6A', 'NXF2B', 'OR10V1', 'OR10A5', 'SNORA51', 'OTX2', 'GRIN2B', 'TMPRSS11F', 'WFDC5', 'IL31', 'OR8S1', 'FGF23', 'OR5H14', 'HMHB1', 'PSG7', 'C18ORF42', 'LINC00895', 'MS4A6E', 'PPY', 'GOLGA6D', 'SCGB1C1', 'NOX3', 'KRTAP10-12', 'OR1N1', 'ASB17', 'ADAM18', 'ITLN2', 'RPL13AP17', 'OR1S2', 'KRTAP10-11', 'VWC2L', 'OR2G2', 'OR8G5', 'TAAR9', 'BRDTP1', 'PLG', 'SSX5', 'LEUTX', 'OR4D9', 'PWAR4', 'CRYAA', 'MAGEA10', 'TTTY14', 'TPD52L3', 'HIST1H4F', 'LINC01205', 'GDNF', 'SNORA34', 'CAPZA3', 'POTED', 'GPR52', 'MMP23A', 'LINC00636', 'ARSF', 'TCP10L2', 'SNORD89', 'XAGE5', 'C2ORF83', 'KRTAP12-2', 'COL6A4P1', 'TSGA13', 'LOC391343', 'ALOX12B', 'BTNL3', 'LOC391003', 'CYP11B2', 'CFHR4', 'SNORA70B', 'SFTA3', 'FAM27B', 'FMR1NB', 'HBD', 'RSPH6A', 'OR5T2', 'ANKUB1', 'OR4S1', 'BPIFA3', 'TRIM51', 'CYP2W1', 'OR9G4', 'CASC8', 'OPN1MW', 'SLC38A8', 'SSX8', 'ACTR3BP2', 'PROKR1', 'FOXN3-AS2', 'ARR3', 'OR56A1', 'ACTRT2', 'INSM2', 'P2RX3', 'ARHGAP36', 'HNRNPCL1', 'TBC1D28', 'DMRT1', 'SDR16C6P', 'LINC00469', 'TAS2R60', 'STATH', 'KHDC1L', 'LINC00111', 'SLC13A1', 'ANKRD18DP', 'PF4', 'POTEH', 'C11ORF94', 'RESP18', 'EDDM3A', 'RTP2', 'DAOA', 'ASB18', 'C20ORF173', 'TKTL2', 'ADGRG7', 'OR4C16', 'DEFB126', 'DEFB129', 'GAGE1', 'OR4F5', 'ZIM3', 'IFITM5', 'OR6Y1', 'OR7A17', 'LINC00114', 'SPACA7', 'DUXA', 'OR6B3', 'DEFB104A', 'LHX9', 'SOX3', 'YWHAEP7', 'OR8H2', 'LGI3', 'FAM169B', 'PRAMEF20', 'CTRB1', 'LINC01566', 'KRTAP19-2', 'RGS8', 'MYBPHL', 'KRTAP6-1', 'KRTAP25-1', 'TRPV5', 'LINC00523', 'WFDC8', 'TCP10', 'GAGE2D', 'KCNQ1DN', 'TAS2R13', 'CPLX4', 'OR52H1', 'CLRN2', 'TMEM72', 'HSFY2', 'OR2T35', 'SFTPC', 'OR4K17', 'KRTAP13-1', 'SPANXA2', 'CCKAR', 'MYF5', 'TMEM202', 'GABRG3', 'AVPR1B', 'OR4K2', 'FCAMR', 'ASAP1-IT1', 'INS', 'CGB5', 'MMD2', 'CNTNAP4', 'LCNL1', 'FDCSP', 'KLK9', 'OLFM3', 'GH1', 'MAGEB6', 'CCDC166', 'LINC01101', 'SPDYC', 'MBD3L5', 'CRNN', 'LINC00113', 'CRLF2', 'NEU2', 'BEND2', 'HPD', 'OR8G2', 'OR14I1', 'SVOP', 'FAM71C', 'OLIG1', 'YIPF7', 'TPTE', 'IQCJ', 'OTOL1', 'IZUMO1R', 'LIPN', 'PRDM14', 'CYLC2', 'OR10H2', 'FAM27L', 'LRRTM1', 'OLAH', 'PRKAG3', 'HOXC12', 'PSG11', 'LOC285847', 'TARM1', 'DNTT', 'XAGE3', 'ALPPL2', 'FTMT', 'TCEB3C', 'FRMPD4', 'RHAG', 'SNORD115-26', 'GUCY2EP', 'KRTAP10-7', 'NANOS2', 'KRTAP10-1', 'SCN1A', 'KRT85', 'DEFB110', 'DAW1', 'OR4D6', 'LPO', 'BARHL2', 'OPRD1', 'DISC2', 'OR5H6', 'ABRA', 'OR5M10', 'IL17F', 'UGT2A3', 'C9ORF135', 'XKR7', 'PYDC2', 'UCMA', 'NKX1-2', 'LOC646813', 'OR1L1', 'TFF2', 'F11', 'OR6B2', 'SNORA59B', 'LCE1D', 'C20ORF166-AS1', 'PISRT1', 'TTTY15', 'C1ORF146', 'LCN9', 'TBC1D3P2', 'SNORA16B', 'FBXW12', 'MYBPC2', 'TMEM207', 'EPS8L3', 'SPATA19', 'SLC2A2', 'TTTY9B', 'TTTY8', 'ANXA8L1', 'SBSN', 'ADAM29', 'REG4', 'CHIAP2', 'ANP32D', 'GRK1', 'SPACA3', 'IGLL3P', 'CXADRP2', 'CETN1', 'IL26', 'CGB8', 'OR2M7', 'HBG2', 'FRMPD2B', 'CPLX3', 'OR4C12', 'ZNF679', 'SULT1C3', 'IVL', 'GUCY2F', 'GAGE2B', 'KRTAP21-1', 'SNORD94', 'PCGEM1', 'LMNTD1', 'MAGEA1', 'UGT1A5', 'DEFB134', 'CALR3', 'PSKH2', 'SNCB', 'FKBP6', 'PRAMEF1', 'MOGAT3', 'CYP7A1', 'POM121L2', 'CNGB1', 'GBX2', 'OR1E2', 'OR51I2', 'NYX', 'HAO1', 'LYZL1', 'OR51G2', 'NKX2-1', 'OR52E8', 'ZNF705A', 'OR5M8', 'LOC729609', 'OR6K6', 'GOLGA6L1', 'LINC00032', 'SATB2-AS1', 'ALX4', 'CCL24', 'FAM74A3', 'LINC00923', 'KCNK4', 'SNORA1', 'SNAR-F', 'SNORA84', 'TMEM88B', 'HTR3E', 'SLITRK3', 'SYCN', 'SLC25A31', 'KRTAP19-6', 'LINC00608', 'IFNA13', 'TSKS', 'SRY', 'TRHR', 'RPL3L', 'MAP3K15', 'BMP15', 'CRYGB', 'KGFLP1', 'ALLC', 'C10ORF120', 'DMRTB1', 'KRTAP2-1', 'NTS', 'INSC', 'DPPA2', 'RAX2', 'MUSK', 'CLRN1-AS1', 'TRIML1', 'TFAMP1', 'DKFZP434K028', 'FFAR1', 'KCNIP4-IT1', 'PROKR2', 'SLC6A5', 'NLRP13', 'POU6F2', 'FAM138D', 'LOC286238', 'OACYLP', 'CT47B1', 'OR1K1', 'GDPD2', 'DEFB123', 'ADGRD2', 'ANGPTL3', 'OR51F2', 'NKX2-3', 'KCNMB2', 'SLC36A3', 'CD200R1L', 'LCN1', 'MGC27382', 'MUC2', 'SPRR2E', 'LINC00520', 'MAGEA9B', 'GAGE12F', 'FOXD4L3', 'KIR3DL3', 'PTX4', 'AKR1C8P', 'CDRT15', 'GCSAML-AS1', 'LINC00575', 'IFNA7', 'LINC00479', 'HGC6.3', 'OR6A2', 'SLC10A1', 'CTRC', 'LINC00202-2', 'OR13C3', 'LINC01565', 'KRT25', 'ARL13A', 'KRTAP19-3', 'PAPOLB', 'MTVR2', 'SLC9C1', 'ADGRG4', 'IL36RN', 'LRRC30', 'KRTAP9-2', 'USP26', 'C12ORF50', 'KRT71', 'TRIM48', 'LHCGR', 'FAM71B', 'USP17L6P', 'BPIFB4', 'C6ORF10', 'OR7D4', 'LINC00303', 'USH1C', 'OCSTAMP', 'EDDM3B', 'CSN3', 'DAZ1', 'KRTAP10-6', 'OR2M4', 'DMRTC1', 'MAGEA6', 'ODF3', 'TNP1', 'AMER3', 'HULC', 'OR10W1', 'OR12D2', 'FOXR1', 'OR7G3', 'SLC17A6', 'PRB4', 'LINC01312', 'RPS4Y2', 'LINC00410', 'GUCA1C', 'KRTAP1-1', 'NKAIN3', 'NEUROD1', 'AQP2', 'XIRP2', 'CER1', 'SPOCK3', 'ACSM4', 'FAM170B', 'SPZ1', 'OR5M3', 'GKN2', 'KRTAP4-3', 'KRTAP1-5', 'FAM224B', 'ACSM2B', 'CRYGC', 'BTF3P11', 'OVCH1', 'BCYRN1', 'POTEG', 'BTN1A1', 'OR51B5', 'CHRNB3', 'GNAT3', 'FAM205A', 'LOC647859', 'HTR1A', 'PTH2', 'CALCB', 'SLC5A8', 'SLC5A7', 'OR1L4', 'LINC00304', 'TDH', 'HBE1', 'DMP1', 'MAGEB3', 'CNTN5', 'FAM19A1', 'OR2T10', 'FAM19A4', 'OR2AG1', 'FBXO47', 'HCRTR1', 'SHH', 'KCNG4', 'PRAC1', 'OR51M1', 'NLRP8', 'SHD', 'BPIFB3', 'SPANXN3', 'AHSG', 'OR13H1', 'SSX9', 'SERPINB12', 'LOC284798', 'LINC00671', 'NUTM1', 'KRT83', 'RFX6', 'SCTR', 'NCAN', 'LINC01142', 'OR7G2', 'AATK-AS1', 'H3F3AP5', 'SLC22A10', 'KRTAP11-1', 'FAM138B', 'C2ORF27B', 'GPHA2', 'DSCR10', 'CRISP2', 'UROC1', 'PPP1R2P9', 'DCT', 'PRL', 'POU4F2', 'HTR2C', 'NYAP2', 'SNORA76C', 'AVP', 'OR2G6', 'PTCHD3', 'AADACL3', 'TMEM14E', 'CLEC4G', 'HIST1H3A', 'PCP4', 'PPY2P', 'UGT1A4', 'GPR22', 'OR5H2', 'AIRE', 'KLRC4', 'OR2L8', 'AKR1D1', 'KCNJ16', 'TRIM75P', 'TRIM55', 'ARL14', 'CPA2', 'NF1P2', 'ISL1', 'ASB15', 'SPATA22', 'SPATA3', 'SSTR3', 'HIST2H2AB', 'OR2A14', 'LINC00207', 'IFNW1', 'SPATA45', 'CNGA2', 'POU4F3', 'SLC22A13', 'C16ORF90', 'GFI1B', 'APCS', 'C6ORF118', 'LOC145845', 'SNORA71B', 'SNORA62', 'PPAN-P2RY11', 'PCDH8', 'SNORA80E', 'FOXE3', 'NXPE1', 'UGT2B10', 'DEFB131', 'CACNG7', 'PRO0611', 'DEFB118', 'PCSK2', 'USP50', 'FAM170A', 'GNAS-AS1', 'LOC392196', 'ZFY', 'LOC400794', 'C1ORF140', 'CT47A6', 'MYH16', 'MIR1-1HG', 'C1ORF94', 'CGB2', 'CT47A7', 'MYL2', 'TMEM132D', 'CA4', 'MAGEA12', 'IGLL1', 'SLC4A9', 'LOC100132831', 'LRRC74A', 'OR10AD1', 'OR4D10', 'CALHM3', 'GH2', 'TDRG1', 'HPVC1', 'TMPRSS11B', 'HBM', 'SLC39A12', 'SLC22A12', 'IFNL1', 'RAPGEF4-AS1', 'ANKRD34C', 'ART1', 'GABRB1', 'OR2A12', 'DNAJC25-GNG10', 'LINC00710', 'ASB10', 'OR2A2', 'ZFAT-AS1', 'LINC00691', 'SH2D7', 'LINC01591', 'LINC00452', 'SCGB3A2', 'FAM47C', 'CSNK1A1P1', 'PRR32', 'SNORA72', 'GPR139', 'NEUROD6', 'KRTAP6-2', 'OR5B17', 'PDX1', 'ADRB3', 'GBA3', 'MTNR1A', 'GPR50', 'SPRR1B', 'MUC13', 'GPR61', 'KRTAP12-1', 'GSC2', 'GPRC6A', 'ANKRD20A20P', 'TRPM3', 'FERD3L', 'VIL1', 'CST9L', 'APOA5', 'NEUROG1', 'B4GALNT2', 'SNORA27', 'LHFPL4', 'C11ORF87', 'PRAMEF16', 'OR51L1', 'NKX6-2', 'SNORA2B', 'PRDM9', 'BANF2', 'PRSS1', 'PRSS57', 'OR51T1', 'VWA5B1', 'ZSCAN10', 'TKTL1', 'VSTM5', 'OTOP1', 'PRSS48', 'PAEP', 'SERPINB11', 'LINC00336', 'SPINK14', 'SNORA16A', 'RAET1L', 'SST', 'SSX2', 'CDHR5', 'NPSR1-AS1', 'C4ORF50', 'FOXG1', 'B3GALT1', 'TMEM252', 'PSAPL1', 'GOLGA2P6', 'PACRG-AS1', 'INS-IGF2', 'ZG16', 'MT1B', 'BET1P1', 'ITPK1-AS1', 'HYMAI', 'NHLH2', 'FAM71E2', 'FEZF1', 'OR52K2', 'NPY', 'MEP1A', 'OR2T2', 'SYT14P1', 'ADGRE3', 'OR3A2', 'SCARNA8', 'TRIM49', 'TRIM49D2', 'CLLU1', 'MAGEA11', 'OR2K2', 'BAGE', 'C9ORF171', 'NPSR1', 'CLEC4M', 'GJB4', 'ACTL7B', 'LINC00244', 'CPN1', 'OTC', 'CTRB2', 'FRMPD2', 'C1ORF158', 'SPINT3', 'GCGR', 'OR4D1', 'SNORA67', 'GCKR', 'C17ORF78', 'SNORA38', 'NPPC', 'MBL2', 'KLK13', 'KRTAP3-2', 'TAS2R42', 'CCER1', 'RNF222', 'SLCO1A2', 'DACH2', 'IFNL2', 'CACNG3', 'PASD1', 'LOC100130264', 'IL13', 'FER1L6', 'DMRTC2', 'CYP1A2', 'OPRM1', 'OR12D3', 'FAM9B', 'FRG2DP', 'CMTM5', 'TNP2', 'TP53TG5', 'LINC00964', 'CHRNA9', 'MAS1L', 'CCDC54', 'F2', 'C12ORF56', 'CLRN1', 'S100A12', 'OR5M1', 'CYP2A7', 'OR5K1', 'POU4F1', 'ATOH7', 'VCX3A', 'MYADML', 'SLITRK1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.5235125300291038e-15 NRMSE: 3.6766960205350383e-16 MAPE: 2.7827760098175073e-13 Pearson Correlation: 0.42553893867441217 Spearman Correlation: 0.3250589159465829 Coefficient of Determination: -0.44867326057512225 RMSE: 0.43918303516351964 NRMSE: 0.19130680627412974 MAPE: 112.37032873788533 Predictor: ElasticNet Pearson Correlation: 0.9399429468371852 Spearman Correlation: 0.8328566036762407 Coefficient of Determination: 0.8686045648217138 RMSE: 0.18937053734136164 NRMSE: 0.04570083194762209 MAPE: 49.50884340319304 Pearson Correlation: 0.6785657027545545 Spearman Correlation: 0.5329517824411776 Coefficient of Determination: 0.4544948283630478 RMSE: 0.2695006207633549 NRMSE: 0.11739365804040375 MAPE: 95.81649142189494 Predictor: RandomForests Pearson Correlation: 0.8635325227086035 Spearman Correlation: 0.7283128253148654 Coefficient of Determination: 0.7420565530830756 RMSE: 0.2653288790307604 NRMSE: 0.06403187466051123 MAPE: 55.989417845245505 Pearson Correlation: 0.7772130607314441 Spearman Correlation: 0.6683761359497389 Coefficient of Determination: 0.5524991392760177 RMSE: 0.24409409383019257 NRMSE: 0.10632665149200356 MAPE: 80.7802139115782 Protein: CCND1 x_train_column_count: 1053 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'LINC00200', 'OR52B4', 'OR4F15', 'OR8J3', 'HTR5A', 'DAZL', 'RAB9BP1', 'SNORA32', 'C10ORF53', 'KRTAP19-8', 'IFNA16', 'OR2L2', 'TGIF2LX', 'F13B', 'FAM71A', 'OR11L1', 'OR9A2', 'OR8B3', 'TXLNGY', 'ZCCHC13', 'HBG1', 'OR2M3', 'GUCA2B', 'CLEC6A', 'NXF2B', 'OR10V1', 'OR10A5', 'SNORA51', 'OTX2', 'GRIN2B', 'TMPRSS11F', 'WFDC5', 'IL31', 'OR8S1', 'FGF23', 'OR5H14', 'HMHB1', 'PSG7', 'C18ORF42', 'LINC00895', 'MS4A6E', 'PPY', 'GOLGA6D', 'SCGB1C1', 'NOX3', 'KRTAP10-12', 'OR1N1', 'ASB17', 'ADAM18', 'ITLN2', 'RPL13AP17', 'OR1S2', 'KRTAP10-11', 'VWC2L', 'OR2G2', 'OR8G5', 'TAAR9', 'BRDTP1', 'PLG', 'SSX5', 'LEUTX', 'OR4D9', 'PWAR4', 'CRYAA', 'MAGEA10', 'TTTY14', 'TPD52L3', 'HIST1H4F', 'LINC01205', 'GDNF', 'SNORA34', 'CAPZA3', 'POTED', 'GPR52', 'MMP23A', 'LINC00636', 'ARSF', 'TCP10L2', 'SNORD89', 'XAGE5', 'C2ORF83', 'KRTAP12-2', 'COL6A4P1', 'TSGA13', 'LOC391343', 'ALOX12B', 'BTNL3', 'LOC391003', 'CYP11B2', 'CFHR4', 'SNORA70B', 'SFTA3', 'FAM27B', 'FMR1NB', 'HBD', 'RSPH6A', 'OR5T2', 'ANKUB1', 'OR4S1', 'BPIFA3', 'TRIM51', 'CYP2W1', 'OR9G4', 'CASC8', 'OPN1MW', 'SLC38A8', 'SSX8', 'ACTR3BP2', 'PROKR1', 'FOXN3-AS2', 'ARR3', 'OR56A1', 'ACTRT2', 'INSM2', 'P2RX3', 'ARHGAP36', 'HNRNPCL1', 'TBC1D28', 'DMRT1', 'SDR16C6P', 'LINC00469', 'TAS2R60', 'STATH', 'KHDC1L', 'LINC00111', 'SLC13A1', 'ANKRD18DP', 'PF4', 'POTEH', 'C11ORF94', 'RESP18', 'EDDM3A', 'RTP2', 'DAOA', 'ASB18', 'C20ORF173', 'TKTL2', 'ADGRG7', 'OR4C16', 'DEFB126', 'DEFB129', 'GAGE1', 'OR4F5', 'ZIM3', 'IFITM5', 'OR6Y1', 'OR7A17', 'LINC00114', 'SPACA7', 'DUXA', 'OR6B3', 'DEFB104A', 'LHX9', 'SOX3', 'YWHAEP7', 'OR8H2', 'LGI3', 'FAM169B', 'PRAMEF20', 'CTRB1', 'LINC01566', 'KRTAP19-2', 'RGS8', 'MYBPHL', 'KRTAP6-1', 'KRTAP25-1', 'TRPV5', 'LINC00523', 'WFDC8', 'TCP10', 'GAGE2D', 'KCNQ1DN', 'TAS2R13', 'CPLX4', 'OR52H1', 'CLRN2', 'TMEM72', 'HSFY2', 'OR2T35', 'SFTPC', 'OR4K17', 'KRTAP13-1', 'SPANXA2', 'CCKAR', 'MYF5', 'TMEM202', 'GABRG3', 'AVPR1B', 'OR4K2', 'FCAMR', 'ASAP1-IT1', 'INS', 'CGB5', 'MMD2', 'CNTNAP4', 'LCNL1', 'FDCSP', 'KLK9', 'OLFM3', 'GH1', 'MAGEB6', 'CCDC166', 'LINC01101', 'SPDYC', 'MBD3L5', 'CRNN', 'LINC00113', 'CRLF2', 'NEU2', 'BEND2', 'HPD', 'OR8G2', 'OR14I1', 'SVOP', 'FAM71C', 'OLIG1', 'YIPF7', 'TPTE', 'IQCJ', 'OTOL1', 'IZUMO1R', 'LIPN', 'PRDM14', 'CYLC2', 'OR10H2', 'FAM27L', 'LRRTM1', 'OLAH', 'PRKAG3', 'HOXC12', 'PSG11', 'LOC285847', 'TARM1', 'DNTT', 'XAGE3', 'ALPPL2', 'FTMT', 'TCEB3C', 'FRMPD4', 'RHAG', 'SNORD115-26', 'GUCY2EP', 'KRTAP10-7', 'NANOS2', 'KRTAP10-1', 'SCN1A', 'KRT85', 'DEFB110', 'DAW1', 'OR4D6', 'LPO', 'BARHL2', 'OPRD1', 'DISC2', 'OR5H6', 'ABRA', 'OR5M10', 'IL17F', 'UGT2A3', 'C9ORF135', 'XKR7', 'PYDC2', 'UCMA', 'NKX1-2', 'LOC646813', 'OR1L1', 'TFF2', 'F11', 'OR6B2', 'SNORA59B', 'LCE1D', 'C20ORF166-AS1', 'PISRT1', 'TTTY15', 'C1ORF146', 'LCN9', 'TBC1D3P2', 'SNORA16B', 'FBXW12', 'MYBPC2', 'TMEM207', 'EPS8L3', 'SPATA19', 'SLC2A2', 'TTTY9B', 'TTTY8', 'ANXA8L1', 'SBSN', 'ADAM29', 'REG4', 'CHIAP2', 'ANP32D', 'GRK1', 'SPACA3', 'IGLL3P', 'CXADRP2', 'CETN1', 'IL26', 'CGB8', 'OR2M7', 'HBG2', 'FRMPD2B', 'CPLX3', 'OR4C12', 'ZNF679', 'SULT1C3', 'IVL', 'GUCY2F', 'GAGE2B', 'KRTAP21-1', 'SNORD94', 'PCGEM1', 'LMNTD1', 'MAGEA1', 'UGT1A5', 'DEFB134', 'CALR3', 'PSKH2', 'SNCB', 'FKBP6', 'PRAMEF1', 'MOGAT3', 'CYP7A1', 'POM121L2', 'CNGB1', 'GBX2', 'OR1E2', 'OR51I2', 'NYX', 'HAO1', 'LYZL1', 'OR51G2', 'NKX2-1', 'OR52E8', 'ZNF705A', 'OR5M8', 'LOC729609', 'OR6K6', 'GOLGA6L1', 'LINC00032', 'SATB2-AS1', 'ALX4', 'CCL24', 'FAM74A3', 'LINC00923', 'KCNK4', 'SNORA1', 'SNAR-F', 'SNORA84', 'TMEM88B', 'HTR3E', 'SLITRK3', 'SYCN', 'SLC25A31', 'KRTAP19-6', 'LINC00608', 'IFNA13', 'TSKS', 'SRY', 'TRHR', 'RPL3L', 'MAP3K15', 'BMP15', 'CRYGB', 'KGFLP1', 'ALLC', 'C10ORF120', 'DMRTB1', 'KRTAP2-1', 'NTS', 'INSC', 'DPPA2', 'RAX2', 'MUSK', 'CLRN1-AS1', 'TRIML1', 'TFAMP1', 'DKFZP434K028', 'FFAR1', 'KCNIP4-IT1', 'PROKR2', 'SLC6A5', 'NLRP13', 'POU6F2', 'FAM138D', 'LOC286238', 'OACYLP', 'CT47B1', 'OR1K1', 'GDPD2', 'DEFB123', 'ADGRD2', 'ANGPTL3', 'OR51F2', 'NKX2-3', 'KCNMB2', 'SLC36A3', 'CD200R1L', 'LCN1', 'MGC27382', 'MUC2', 'SPRR2E', 'LINC00520', 'MAGEA9B', 'GAGE12F', 'FOXD4L3', 'KIR3DL3', 'PTX4', 'AKR1C8P', 'CDRT15', 'GCSAML-AS1', 'LINC00575', 'IFNA7', 'LINC00479', 'HGC6.3', 'OR6A2', 'SLC10A1', 'CTRC', 'LINC00202-2', 'OR13C3', 'LINC01565', 'KRT25', 'ARL13A', 'KRTAP19-3', 'PAPOLB', 'MTVR2', 'SLC9C1', 'ADGRG4', 'IL36RN', 'LRRC30', 'KRTAP9-2', 'USP26', 'C12ORF50', 'KRT71', 'TRIM48', 'LHCGR', 'FAM71B', 'USP17L6P', 'BPIFB4', 'C6ORF10', 'OR7D4', 'LINC00303', 'USH1C', 'OCSTAMP', 'EDDM3B', 'CSN3', 'DAZ1', 'KRTAP10-6', 'OR2M4', 'DMRTC1', 'MAGEA6', 'ODF3', 'TNP1', 'AMER3', 'HULC', 'OR10W1', 'OR12D2', 'FOXR1', 'OR7G3', 'SLC17A6', 'PRB4', 'LINC01312', 'RPS4Y2', 'LINC00410', 'GUCA1C', 'KRTAP1-1', 'NKAIN3', 'NEUROD1', 'AQP2', 'XIRP2', 'CER1', 'SPOCK3', 'ACSM4', 'FAM170B', 'SPZ1', 'OR5M3', 'GKN2', 'KRTAP4-3', 'KRTAP1-5', 'FAM224B', 'ACSM2B', 'CRYGC', 'BTF3P11', 'OVCH1', 'BCYRN1', 'POTEG', 'BTN1A1', 'OR51B5', 'CHRNB3', 'GNAT3', 'FAM205A', 'LOC647859', 'HTR1A', 'PTH2', 'CALCB', 'SLC5A8', 'SLC5A7', 'OR1L4', 'LINC00304', 'TDH', 'HBE1', 'DMP1', 'MAGEB3', 'CNTN5', 'FAM19A1', 'OR2T10', 'FAM19A4', 'OR2AG1', 'FBXO47', 'HCRTR1', 'SHH', 'KCNG4', 'PRAC1', 'OR51M1', 'NLRP8', 'SHD', 'BPIFB3', 'SPANXN3', 'AHSG', 'OR13H1', 'SSX9', 'SERPINB12', 'LOC284798', 'LINC00671', 'NUTM1', 'KRT83', 'RFX6', 'SCTR', 'NCAN', 'LINC01142', 'OR7G2', 'AATK-AS1', 'H3F3AP5', 'SLC22A10', 'KRTAP11-1', 'FAM138B', 'C2ORF27B', 'GPHA2', 'DSCR10', 'CRISP2', 'UROC1', 'PPP1R2P9', 'DCT', 'PRL', 'POU4F2', 'HTR2C', 'NYAP2', 'SNORA76C', 'AVP', 'OR2G6', 'PTCHD3', 'AADACL3', 'TMEM14E', 'CLEC4G', 'HIST1H3A', 'PCP4', 'PPY2P', 'UGT1A4', 'GPR22', 'OR5H2', 'AIRE', 'KLRC4', 'OR2L8', 'AKR1D1', 'KCNJ16', 'TRIM75P', 'TRIM55', 'ARL14', 'CPA2', 'NF1P2', 'ISL1', 'ASB15', 'SPATA22', 'SPATA3', 'SSTR3', 'HIST2H2AB', 'OR2A14', 'LINC00207', 'IFNW1', 'SPATA45', 'CNGA2', 'POU4F3', 'SLC22A13', 'C16ORF90', 'GFI1B', 'APCS', 'C6ORF118', 'LOC145845', 'SNORA71B', 'SNORA62', 'PPAN-P2RY11', 'PCDH8', 'SNORA80E', 'FOXE3', 'NXPE1', 'UGT2B10', 'DEFB131', 'CACNG7', 'PRO0611', 'DEFB118', 'PCSK2', 'USP50', 'FAM170A', 'GNAS-AS1', 'LOC392196', 'ZFY', 'LOC400794', 'C1ORF140', 'CT47A6', 'MYH16', 'MIR1-1HG', 'C1ORF94', 'CGB2', 'CT47A7', 'MYL2', 'TMEM132D', 'CA4', 'MAGEA12', 'IGLL1', 'SLC4A9', 'LOC100132831', 'LRRC74A', 'OR10AD1', 'OR4D10', 'CALHM3', 'GH2', 'TDRG1', 'HPVC1', 'TMPRSS11B', 'HBM', 'SLC39A12', 'SLC22A12', 'IFNL1', 'RAPGEF4-AS1', 'ANKRD34C', 'ART1', 'GABRB1', 'OR2A12', 'DNAJC25-GNG10', 'LINC00710', 'ASB10', 'OR2A2', 'ZFAT-AS1', 'LINC00691', 'SH2D7', 'LINC01591', 'LINC00452', 'SCGB3A2', 'FAM47C', 'CSNK1A1P1', 'PRR32', 'SNORA72', 'GPR139', 'NEUROD6', 'KRTAP6-2', 'OR5B17', 'PDX1', 'ADRB3', 'GBA3', 'MTNR1A', 'GPR50', 'SPRR1B', 'MUC13', 'GPR61', 'KRTAP12-1', 'GSC2', 'GPRC6A', 'ANKRD20A20P', 'TRPM3', 'FERD3L', 'VIL1', 'CST9L', 'APOA5', 'NEUROG1', 'B4GALNT2', 'SNORA27', 'LHFPL4', 'C11ORF87', 'PRAMEF16', 'OR51L1', 'NKX6-2', 'SNORA2B', 'PRDM9', 'BANF2', 'PRSS1', 'PRSS57', 'OR51T1', 'VWA5B1', 'ZSCAN10', 'TKTL1', 'VSTM5', 'OTOP1', 'PRSS48', 'PAEP', 'SERPINB11', 'LINC00336', 'SPINK14', 'SNORA16A', 'RAET1L', 'SST', 'SSX2', 'CDHR5', 'NPSR1-AS1', 'C4ORF50', 'FOXG1', 'B3GALT1', 'TMEM252', 'PSAPL1', 'GOLGA2P6', 'PACRG-AS1', 'INS-IGF2', 'ZG16', 'MT1B', 'BET1P1', 'ITPK1-AS1', 'HYMAI', 'NHLH2', 'FAM71E2', 'FEZF1', 'OR52K2', 'NPY', 'MEP1A', 'OR2T2', 'SYT14P1', 'ADGRE3', 'OR3A2', 'SCARNA8', 'TRIM49', 'TRIM49D2', 'CLLU1', 'MAGEA11', 'OR2K2', 'BAGE', 'C9ORF171', 'NPSR1', 'CLEC4M', 'GJB4', 'ACTL7B', 'LINC00244', 'CPN1', 'OTC', 'CTRB2', 'FRMPD2', 'C1ORF158', 'SPINT3', 'GCGR', 'OR4D1', 'SNORA67', 'GCKR', 'C17ORF78', 'SNORA38', 'NPPC', 'MBL2', 'KLK13', 'KRTAP3-2', 'TAS2R42', 'CCER1', 'RNF222', 'SLCO1A2', 'DACH2', 'IFNL2', 'CACNG3', 'PASD1', 'LOC100130264', 'IL13', 'FER1L6', 'DMRTC2', 'CYP1A2', 'OPRM1', 'OR12D3', 'FAM9B', 'FRG2DP', 'CMTM5', 'TNP2', 'TP53TG5', 'LINC00964', 'CHRNA9', 'MAS1L', 'CCDC54', 'F2', 'C12ORF56', 'CLRN1', 'S100A12', 'OR5M1', 'CYP2A7', 'OR5K1', 'POU4F1', 'ATOH7', 'VCX3A', 'MYADML', 'SLITRK1', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.0904075819415519e-15 NRMSE: 6.555215050567818e-16 MAPE: 4.081944658215197e-12 Pearson Correlation: 0.11310182686945085 Spearman Correlation: 0.09917580019700996 Coefficient of Determination: -2.320731096229452 RMSE: 0.3822057976089536 NRMSE: 0.3621670923871714 MAPE: 1097.1013081858296 Predictor: ElasticNet Pearson Correlation: 0.7350351226139087 Spearman Correlation: 0.7187460704793904 Coefficient of Determination: 0.4744659967400606 RMSE: 0.17736050870719897 NRMSE: 0.10662400879344902 MAPE: 346.98847682665485 Pearson Correlation: 0.2748671347728959 Spearman Correlation: 0.2341999276798963 Coefficient of Determination: 0.06712055411281859 RMSE: 0.20257841935649137 NRMSE: 0.19195741555389437 MAPE: 264.2994883945296 Predictor: RandomForests Pearson Correlation: 0.5647187522444167 Spearman Correlation: 0.5463547782799991 Coefficient of Determination: 0.274970649114074 RMSE: 0.20832160326890048 NRMSE: 0.1252369234882955 MAPE: 498.7247625136599 Pearson Correlation: 0.3809372084467276 Spearman Correlation: 0.36305938976795227 Coefficient of Determination: 0.1334543099761546 RMSE: 0.19524330438907114 NRMSE: 0.18500687404799554 MAPE: 311.210292061215 Protein: ERBB2 x_train_column_count: 1053 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'LINC00200', 'OR52B4', 'OR4F15', 'OR8J3', 'HTR5A', 'DAZL', 'RAB9BP1', 'SNORA32', 'C10ORF53', 'KRTAP19-8', 'IFNA16', 'OR2L2', 'TGIF2LX', 'F13B', 'FAM71A', 'OR11L1', 'OR9A2', 'OR8B3', 'TXLNGY', 'ZCCHC13', 'HBG1', 'OR2M3', 'GUCA2B', 'CLEC6A', 'NXF2B', 'OR10V1', 'OR10A5', 'SNORA51', 'OTX2', 'GRIN2B', 'TMPRSS11F', 'WFDC5', 'IL31', 'OR8S1', 'FGF23', 'OR5H14', 'HMHB1', 'PSG7', 'C18ORF42', 'LINC00895', 'MS4A6E', 'PPY', 'GOLGA6D', 'SCGB1C1', 'NOX3', 'KRTAP10-12', 'OR1N1', 'ASB17', 'ADAM18', 'ITLN2', 'RPL13AP17', 'OR1S2', 'KRTAP10-11', 'VWC2L', 'OR2G2', 'OR8G5', 'TAAR9', 'BRDTP1', 'PLG', 'SSX5', 'LEUTX', 'OR4D9', 'PWAR4', 'CRYAA', 'MAGEA10', 'TTTY14', 'TPD52L3', 'HIST1H4F', 'LINC01205', 'GDNF', 'SNORA34', 'CAPZA3', 'POTED', 'GPR52', 'MMP23A', 'LINC00636', 'ARSF', 'TCP10L2', 'SNORD89', 'XAGE5', 'C2ORF83', 'KRTAP12-2', 'COL6A4P1', 'TSGA13', 'LOC391343', 'ALOX12B', 'BTNL3', 'LOC391003', 'CYP11B2', 'CFHR4', 'SNORA70B', 'SFTA3', 'FAM27B', 'FMR1NB', 'HBD', 'RSPH6A', 'OR5T2', 'ANKUB1', 'OR4S1', 'BPIFA3', 'TRIM51', 'CYP2W1', 'OR9G4', 'CASC8', 'OPN1MW', 'SLC38A8', 'SSX8', 'ACTR3BP2', 'PROKR1', 'FOXN3-AS2', 'ARR3', 'OR56A1', 'ACTRT2', 'INSM2', 'P2RX3', 'ARHGAP36', 'HNRNPCL1', 'TBC1D28', 'DMRT1', 'SDR16C6P', 'LINC00469', 'TAS2R60', 'STATH', 'KHDC1L', 'LINC00111', 'SLC13A1', 'ANKRD18DP', 'PF4', 'POTEH', 'C11ORF94', 'RESP18', 'EDDM3A', 'RTP2', 'DAOA', 'ASB18', 'C20ORF173', 'TKTL2', 'ADGRG7', 'OR4C16', 'DEFB126', 'DEFB129', 'GAGE1', 'OR4F5', 'ZIM3', 'IFITM5', 'OR6Y1', 'OR7A17', 'LINC00114', 'SPACA7', 'DUXA', 'OR6B3', 'DEFB104A', 'LHX9', 'SOX3', 'YWHAEP7', 'OR8H2', 'LGI3', 'FAM169B', 'PRAMEF20', 'CTRB1', 'LINC01566', 'KRTAP19-2', 'RGS8', 'MYBPHL', 'KRTAP6-1', 'KRTAP25-1', 'TRPV5', 'LINC00523', 'WFDC8', 'TCP10', 'GAGE2D', 'KCNQ1DN', 'TAS2R13', 'CPLX4', 'OR52H1', 'CLRN2', 'TMEM72', 'HSFY2', 'OR2T35', 'SFTPC', 'OR4K17', 'KRTAP13-1', 'SPANXA2', 'CCKAR', 'MYF5', 'TMEM202', 'GABRG3', 'AVPR1B', 'OR4K2', 'FCAMR', 'ASAP1-IT1', 'INS', 'CGB5', 'MMD2', 'CNTNAP4', 'LCNL1', 'FDCSP', 'KLK9', 'OLFM3', 'GH1', 'MAGEB6', 'CCDC166', 'LINC01101', 'SPDYC', 'MBD3L5', 'CRNN', 'LINC00113', 'CRLF2', 'NEU2', 'BEND2', 'HPD', 'OR8G2', 'OR14I1', 'SVOP', 'FAM71C', 'OLIG1', 'YIPF7', 'TPTE', 'IQCJ', 'OTOL1', 'IZUMO1R', 'LIPN', 'PRDM14', 'CYLC2', 'OR10H2', 'FAM27L', 'LRRTM1', 'OLAH', 'PRKAG3', 'HOXC12', 'PSG11', 'LOC285847', 'TARM1', 'DNTT', 'XAGE3', 'ALPPL2', 'FTMT', 'TCEB3C', 'FRMPD4', 'RHAG', 'SNORD115-26', 'GUCY2EP', 'KRTAP10-7', 'NANOS2', 'KRTAP10-1', 'SCN1A', 'KRT85', 'DEFB110', 'DAW1', 'OR4D6', 'LPO', 'BARHL2', 'OPRD1', 'DISC2', 'OR5H6', 'ABRA', 'OR5M10', 'IL17F', 'UGT2A3', 'C9ORF135', 'XKR7', 'PYDC2', 'UCMA', 'NKX1-2', 'LOC646813', 'OR1L1', 'TFF2', 'F11', 'OR6B2', 'SNORA59B', 'LCE1D', 'C20ORF166-AS1', 'PISRT1', 'TTTY15', 'C1ORF146', 'LCN9', 'TBC1D3P2', 'SNORA16B', 'FBXW12', 'MYBPC2', 'TMEM207', 'EPS8L3', 'SPATA19', 'SLC2A2', 'TTTY9B', 'TTTY8', 'ANXA8L1', 'SBSN', 'ADAM29', 'REG4', 'CHIAP2', 'ANP32D', 'GRK1', 'SPACA3', 'IGLL3P', 'CXADRP2', 'CETN1', 'IL26', 'CGB8', 'OR2M7', 'HBG2', 'FRMPD2B', 'CPLX3', 'OR4C12', 'ZNF679', 'SULT1C3', 'IVL', 'GUCY2F', 'GAGE2B', 'KRTAP21-1', 'SNORD94', 'PCGEM1', 'LMNTD1', 'MAGEA1', 'UGT1A5', 'DEFB134', 'CALR3', 'PSKH2', 'SNCB', 'FKBP6', 'PRAMEF1', 'MOGAT3', 'CYP7A1', 'POM121L2', 'CNGB1', 'GBX2', 'OR1E2', 'OR51I2', 'NYX', 'HAO1', 'LYZL1', 'OR51G2', 'NKX2-1', 'OR52E8', 'ZNF705A', 'OR5M8', 'LOC729609', 'OR6K6', 'GOLGA6L1', 'LINC00032', 'SATB2-AS1', 'ALX4', 'CCL24', 'FAM74A3', 'LINC00923', 'KCNK4', 'SNORA1', 'SNAR-F', 'SNORA84', 'TMEM88B', 'HTR3E', 'SLITRK3', 'SYCN', 'SLC25A31', 'KRTAP19-6', 'LINC00608', 'IFNA13', 'TSKS', 'SRY', 'TRHR', 'RPL3L', 'MAP3K15', 'BMP15', 'CRYGB', 'KGFLP1', 'ALLC', 'C10ORF120', 'DMRTB1', 'KRTAP2-1', 'NTS', 'INSC', 'DPPA2', 'RAX2', 'MUSK', 'CLRN1-AS1', 'TRIML1', 'TFAMP1', 'DKFZP434K028', 'FFAR1', 'KCNIP4-IT1', 'PROKR2', 'SLC6A5', 'NLRP13', 'POU6F2', 'FAM138D', 'LOC286238', 'OACYLP', 'CT47B1', 'OR1K1', 'GDPD2', 'DEFB123', 'ADGRD2', 'ANGPTL3', 'OR51F2', 'NKX2-3', 'KCNMB2', 'SLC36A3', 'CD200R1L', 'LCN1', 'MGC27382', 'MUC2', 'SPRR2E', 'LINC00520', 'MAGEA9B', 'GAGE12F', 'FOXD4L3', 'KIR3DL3', 'PTX4', 'AKR1C8P', 'CDRT15', 'GCSAML-AS1', 'LINC00575', 'IFNA7', 'LINC00479', 'HGC6.3', 'OR6A2', 'SLC10A1', 'CTRC', 'LINC00202-2', 'OR13C3', 'LINC01565', 'KRT25', 'ARL13A', 'KRTAP19-3', 'PAPOLB', 'MTVR2', 'SLC9C1', 'ADGRG4', 'IL36RN', 'LRRC30', 'KRTAP9-2', 'USP26', 'C12ORF50', 'KRT71', 'TRIM48', 'LHCGR', 'FAM71B', 'USP17L6P', 'BPIFB4', 'C6ORF10', 'OR7D4', 'LINC00303', 'USH1C', 'OCSTAMP', 'EDDM3B', 'CSN3', 'DAZ1', 'KRTAP10-6', 'OR2M4', 'DMRTC1', 'MAGEA6', 'ODF3', 'TNP1', 'AMER3', 'HULC', 'OR10W1', 'OR12D2', 'FOXR1', 'OR7G3', 'SLC17A6', 'PRB4', 'LINC01312', 'RPS4Y2', 'LINC00410', 'GUCA1C', 'KRTAP1-1', 'NKAIN3', 'NEUROD1', 'AQP2', 'XIRP2', 'CER1', 'SPOCK3', 'ACSM4', 'FAM170B', 'SPZ1', 'OR5M3', 'GKN2', 'KRTAP4-3', 'KRTAP1-5', 'FAM224B', 'ACSM2B', 'CRYGC', 'BTF3P11', 'OVCH1', 'BCYRN1', 'POTEG', 'BTN1A1', 'OR51B5', 'CHRNB3', 'GNAT3', 'FAM205A', 'LOC647859', 'HTR1A', 'PTH2', 'CALCB', 'SLC5A8', 'SLC5A7', 'OR1L4', 'LINC00304', 'TDH', 'HBE1', 'DMP1', 'MAGEB3', 'CNTN5', 'FAM19A1', 'OR2T10', 'FAM19A4', 'OR2AG1', 'FBXO47', 'HCRTR1', 'SHH', 'KCNG4', 'PRAC1', 'OR51M1', 'NLRP8', 'SHD', 'BPIFB3', 'SPANXN3', 'AHSG', 'OR13H1', 'SSX9', 'SERPINB12', 'LOC284798', 'LINC00671', 'NUTM1', 'KRT83', 'RFX6', 'SCTR', 'NCAN', 'LINC01142', 'OR7G2', 'AATK-AS1', 'H3F3AP5', 'SLC22A10', 'KRTAP11-1', 'FAM138B', 'C2ORF27B', 'GPHA2', 'DSCR10', 'CRISP2', 'UROC1', 'PPP1R2P9', 'DCT', 'PRL', 'POU4F2', 'HTR2C', 'NYAP2', 'SNORA76C', 'AVP', 'OR2G6', 'PTCHD3', 'AADACL3', 'TMEM14E', 'CLEC4G', 'HIST1H3A', 'PCP4', 'PPY2P', 'UGT1A4', 'GPR22', 'OR5H2', 'AIRE', 'KLRC4', 'OR2L8', 'AKR1D1', 'KCNJ16', 'TRIM75P', 'TRIM55', 'ARL14', 'CPA2', 'NF1P2', 'ISL1', 'ASB15', 'SPATA22', 'SPATA3', 'SSTR3', 'HIST2H2AB', 'OR2A14', 'LINC00207', 'IFNW1', 'SPATA45', 'CNGA2', 'POU4F3', 'SLC22A13', 'C16ORF90', 'GFI1B', 'APCS', 'C6ORF118', 'LOC145845', 'SNORA71B', 'SNORA62', 'PPAN-P2RY11', 'PCDH8', 'SNORA80E', 'FOXE3', 'NXPE1', 'UGT2B10', 'DEFB131', 'CACNG7', 'PRO0611', 'DEFB118', 'PCSK2', 'USP50', 'FAM170A', 'GNAS-AS1', 'LOC392196', 'ZFY', 'LOC400794', 'C1ORF140', 'CT47A6', 'MYH16', 'MIR1-1HG', 'C1ORF94', 'CGB2', 'CT47A7', 'MYL2', 'TMEM132D', 'CA4', 'MAGEA12', 'IGLL1', 'SLC4A9', 'LOC100132831', 'LRRC74A', 'OR10AD1', 'OR4D10', 'CALHM3', 'GH2', 'TDRG1', 'HPVC1', 'TMPRSS11B', 'HBM', 'SLC39A12', 'SLC22A12', 'IFNL1', 'RAPGEF4-AS1', 'ANKRD34C', 'ART1', 'GABRB1', 'OR2A12', 'DNAJC25-GNG10', 'LINC00710', 'ASB10', 'OR2A2', 'ZFAT-AS1', 'LINC00691', 'SH2D7', 'LINC01591', 'LINC00452', 'SCGB3A2', 'FAM47C', 'CSNK1A1P1', 'PRR32', 'SNORA72', 'GPR139', 'NEUROD6', 'KRTAP6-2', 'OR5B17', 'PDX1', 'ADRB3', 'GBA3', 'MTNR1A', 'GPR50', 'SPRR1B', 'MUC13', 'GPR61', 'KRTAP12-1', 'GSC2', 'GPRC6A', 'ANKRD20A20P', 'TRPM3', 'FERD3L', 'VIL1', 'CST9L', 'APOA5', 'NEUROG1', 'B4GALNT2', 'SNORA27', 'LHFPL4', 'C11ORF87', 'PRAMEF16', 'OR51L1', 'NKX6-2', 'SNORA2B', 'PRDM9', 'BANF2', 'PRSS1', 'PRSS57', 'OR51T1', 'VWA5B1', 'ZSCAN10', 'TKTL1', 'VSTM5', 'OTOP1', 'PRSS48', 'PAEP', 'SERPINB11', 'LINC00336', 'SPINK14', 'SNORA16A', 'RAET1L', 'SST', 'SSX2', 'CDHR5', 'NPSR1-AS1', 'C4ORF50', 'FOXG1', 'B3GALT1', 'TMEM252', 'PSAPL1', 'GOLGA2P6', 'PACRG-AS1', 'INS-IGF2', 'ZG16', 'MT1B', 'BET1P1', 'ITPK1-AS1', 'HYMAI', 'NHLH2', 'FAM71E2', 'FEZF1', 'OR52K2', 'NPY', 'MEP1A', 'OR2T2', 'SYT14P1', 'ADGRE3', 'OR3A2', 'SCARNA8', 'TRIM49', 'TRIM49D2', 'CLLU1', 'MAGEA11', 'OR2K2', 'BAGE', 'C9ORF171', 'NPSR1', 'CLEC4M', 'GJB4', 'ACTL7B', 'LINC00244', 'CPN1', 'OTC', 'CTRB2', 'FRMPD2', 'C1ORF158', 'SPINT3', 'GCGR', 'OR4D1', 'SNORA67', 'GCKR', 'C17ORF78', 'SNORA38', 'NPPC', 'MBL2', 'KLK13', 'KRTAP3-2', 'TAS2R42', 'CCER1', 'RNF222', 'SLCO1A2', 'DACH2', 'IFNL2', 'CACNG3', 'PASD1', 'LOC100130264', 'IL13', 'FER1L6', 'DMRTC2', 'CYP1A2', 'OPRM1', 'OR12D3', 'FAM9B', 'FRG2DP', 'CMTM5', 'TNP2', 'TP53TG5', 'LINC00964', 'CHRNA9', 'MAS1L', 'CCDC54', 'F2', 'C12ORF56', 'CLRN1', 'S100A12', 'OR5M1', 'CYP2A7', 'OR5K1', 'POU4F1', 'ATOH7', 'VCX3A', 'MYADML', 'SLITRK1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.744448250441072e-15 NRMSE: 6.379283865344178e-16 MAPE: 4.776985084756184e-12 Pearson Correlation: 0.5272432529133877 Spearman Correlation: 0.26185147177849477 Coefficient of Determination: -0.1088398125029757 RMSE: 1.1230834269691605 NRMSE: 0.2025909926706762 MAPE: 627.9809853806652 Predictor: ElasticNet Pearson Correlation: 0.9564513830761691 Spearman Correlation: 0.9156222301304175 Coefficient of Determination: 0.8993972275166799 RMSE: 0.3112275355002532 NRMSE: 0.053022732933583186 MAPE: 464.637247316272 Pearson Correlation: 0.7743549823573317 Spearman Correlation: 0.5769505566789067 Coefficient of Determination: 0.5992686861235064 RMSE: 0.6751561893610049 NRMSE: 0.12179020660960475 MAPE: 196.16230703486332 Predictor: RandomForests Pearson Correlation: 0.83815541749263 Spearman Correlation: 0.6433061399557902 Coefficient of Determination: 0.6967033943283758 RMSE: 0.540389390572369 NRMSE: 0.0920642265486088 MAPE: 535.3791101546082 Pearson Correlation: 0.8652778476314212 Spearman Correlation: 0.6985965652941474 Coefficient of Determination: 0.7437419104337979 RMSE: 0.5399038261570931 NRMSE: 0.09739227688814003 MAPE: 200.65184380203536 Protein: ERBB3 x_train_column_count: 1053 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'OR2W1', 'GABRA4', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'LCE5A', 'RAG2', 'CTSL3P', 'OR8K3', 'SNORA36B', 'MS4A5', 'PRSS54', 'SNAR-G1', 'FGF6', 'BTBD17', 'LCE2D', 'OR9K2', 'FGF22', 'DEFB127', 'SMCP', 'MRGPRG-AS1', 'OR52A1', 'MROH5', 'FAM150A', 'SNORA36A', 'REXO1L6P', 'FAM92A1P2', 'ST8SIA3', 'CHAT', 'LHX3', 'HNF1B', 'CTXN3', 'HYALP1', 'CT47A2', 'HES3', 'SLC18A3', 'AMBN', 'FAM41AY1', 'SNAR-I', 'DEFB113', 'OR8I2', 'TBC1D21', 'SNAR-E', 'C11ORF40', 'SNORA58', 'FLG2', 'OC90', 'OR51A2', 'SSX6', 'GJA10', 'SEC14L3', 'NR0B1', 'CSN2', 'OR2T34', 'CFHR2', 'SMR3B', 'DEFB119', 'SNORD8', 'OR4M2', 'HHLA1', 'OLIG3', 'SPATA31A3', 'OR10T2', 'LOC727924', 'BARHL1', 'LINC01548', 'ATP4B', 'LELP1', 'C17ORF102', 'SPRR2G', 'SNAR-A13', 'LCE1F', 'SPAM1', 'TTTY21', 'CABP5', 'LRTM1', 'GYPA', 'LCE2A', 'SNORA5B', 'CHODL-AS1', 'C3ORF79', 'FAM25BP', 'CLCA1', 'GLYATL3', 'IGF2BP2-AS1', 'KRTAP4-11', 'SLC28A2', 'LINC00305', 'TYR', 'CELA2B', 'KLHL40', 'CLC', 'PROL1', 'CCL15-CCL14', 'GLYCAM1', 'ZNF536', 'DEFB109P1', 'FXYD4', 'OR8U1', 'PSMB11', 'CSH2', 'IL37', 'CA5A', 'OR2B3', 'SPANXN4', 'SOX1', 'ZNF804B', 'CELA2A', 'FAM153C', 'OR8D4', 'SPANXN1', 'OR2T12', 'CT47A11', 'OR13C9', 'FNDC7', 'OR7C2', 'C22ORF42', 'OR5K3', 'OR6C76', 'GLRA4', 'C12ORF40', 'CNTNAP5', 'PAQR9', 'APOA2', 'OR2AE1', 'OR8H1', 'GAGE2C', 'TMEM179', 'IFNA14', 'PGM5-AS1', 'HAO2', 'IQCF2', 'DMBT1P1', 'OR2M2', 'PPBPP1', 'SPIC', 'TSPYL6', 'CD300LD', 'TEX33', 'OR6C4', 'OLIG2', 'AHSP', 'IFNA21', 'LOC440040', 'SNORD115-7', 'DEFB128', 'SLC6A19', 'OR4S2', 'CST13P', 'GABRA6', 'LINC00314', 'DUSP21', 'TEX36-AS1', 'OR2C3', 'ZPBP', 'KRTAP1-3', 'FGF4', 'CD5L', 'CDKL4', 'NPHS2', 'CABS1', 'LOC100129935', 'PSG8', 'OR52A4P', 'LYPD8', 'HTR3B', 'KRTDAP', 'C4ORF51', 'OR4B1', 'RNASE8', 'HFE2', 'GNAT1', 'MOS', 'OR52N5', 'IQCF6', 'DNAJC5G', 'DDI1', 'OR6B1', 'TMEM196', 'ZNF735', 'PLCZ1', 'TTTY2', 'C17ORF64', 'GOLGA8EP', 'SPRR4', 'SCARNA22', 'PLSCR5', 'ARL5C', 'PRB1', 'GOT1L1', 'SOST', 'KRT2', 'KRTAP4-5', 'FAM24A', 'OR6C2', 'PABPC1L2A', 'OR4A16', 'OR52A5', 'MS4A10', 'DNMT3L', 'MORC1', 'VRTN', 'TSPY2', 'NPBWR2', 'TSPY1', 'VSTM2B', 'ARG1', 'PWRN2', 'LILRP2', 'KRTAP21-2', 'OR14C36', 'TAGLN3', 'LRRC7', 'TEX13B', 'LY6G6D', 'OR5H1', 'SLC25A3P1', 'LINC01020', 'OR1B1', 'GJD2', 'LGALS14', 'GABRA1', 'OR2T29', 'BSX', 'PRAMEF5', 'CFC1B', 'TMIGD1', 'ACSM2A', 'KRTAP12-3', 'URAD', 'SYCP1', 'NCOR1P1', 'SNORD116-19', 'SNORA69', 'FAM183CP', 'SNORA28', 'GHSR', 'CCDC38', 'MRGPRX1', 'OR1M1', 'ZAR1L', 'OR6S1', 'H1FNT', 'OR4D11', 'HAND1', 'LINC00200', 'OR52B4', 'OR4F15', 'OR8J3', 'HTR5A', 'DAZL', 'RAB9BP1', 'SNORA32', 'C10ORF53', 'KRTAP19-8', 'IFNA16', 'OR2L2', 'TGIF2LX', 'F13B', 'FAM71A', 'OR11L1', 'OR9A2', 'OR8B3', 'TXLNGY', 'ZCCHC13', 'HBG1', 'OR2M3', 'GUCA2B', 'CLEC6A', 'NXF2B', 'OR10V1', 'OR10A5', 'SNORA51', 'OTX2', 'GRIN2B', 'TMPRSS11F', 'WFDC5', 'IL31', 'OR8S1', 'FGF23', 'OR5H14', 'HMHB1', 'PSG7', 'C18ORF42', 'LINC00895', 'MS4A6E', 'PPY', 'GOLGA6D', 'SCGB1C1', 'NOX3', 'KRTAP10-12', 'OR1N1', 'ASB17', 'ADAM18', 'ITLN2', 'RPL13AP17', 'OR1S2', 'KRTAP10-11', 'VWC2L', 'OR2G2', 'OR8G5', 'TAAR9', 'BRDTP1', 'PLG', 'SSX5', 'LEUTX', 'OR4D9', 'PWAR4', 'CRYAA', 'MAGEA10', 'TTTY14', 'TPD52L3', 'HIST1H4F', 'LINC01205', 'GDNF', 'SNORA34', 'CAPZA3', 'POTED', 'GPR52', 'MMP23A', 'LINC00636', 'ARSF', 'TCP10L2', 'SNORD89', 'XAGE5', 'C2ORF83', 'KRTAP12-2', 'COL6A4P1', 'TSGA13', 'LOC391343', 'ALOX12B', 'BTNL3', 'LOC391003', 'CYP11B2', 'CFHR4', 'SNORA70B', 'SFTA3', 'FAM27B', 'FMR1NB', 'HBD', 'RSPH6A', 'OR5T2', 'ANKUB1', 'OR4S1', 'BPIFA3', 'TRIM51', 'CYP2W1', 'OR9G4', 'CASC8', 'OPN1MW', 'SLC38A8', 'SSX8', 'ACTR3BP2', 'PROKR1', 'FOXN3-AS2', 'ARR3', 'OR56A1', 'ACTRT2', 'INSM2', 'P2RX3', 'ARHGAP36', 'HNRNPCL1', 'TBC1D28', 'DMRT1', 'SDR16C6P', 'LINC00469', 'TAS2R60', 'STATH', 'KHDC1L', 'LINC00111', 'SLC13A1', 'ANKRD18DP', 'PF4', 'POTEH', 'C11ORF94', 'RESP18', 'EDDM3A', 'RTP2', 'DAOA', 'ASB18', 'C20ORF173', 'TKTL2', 'ADGRG7', 'OR4C16', 'DEFB126', 'DEFB129', 'GAGE1', 'OR4F5', 'ZIM3', 'IFITM5', 'OR6Y1', 'OR7A17', 'LINC00114', 'SPACA7', 'DUXA', 'OR6B3', 'DEFB104A', 'LHX9', 'SOX3', 'YWHAEP7', 'OR8H2', 'LGI3', 'FAM169B', 'PRAMEF20', 'CTRB1', 'LINC01566', 'KRTAP19-2', 'RGS8', 'MYBPHL', 'KRTAP6-1', 'KRTAP25-1', 'TRPV5', 'LINC00523', 'WFDC8', 'TCP10', 'GAGE2D', 'KCNQ1DN', 'TAS2R13', 'CPLX4', 'OR52H1', 'CLRN2', 'TMEM72', 'HSFY2', 'OR2T35', 'SFTPC', 'OR4K17', 'KRTAP13-1', 'SPANXA2', 'CCKAR', 'MYF5', 'TMEM202', 'GABRG3', 'AVPR1B', 'OR4K2', 'FCAMR', 'ASAP1-IT1', 'INS', 'CGB5', 'MMD2', 'CNTNAP4', 'LCNL1', 'FDCSP', 'KLK9', 'OLFM3', 'GH1', 'MAGEB6', 'CCDC166', 'LINC01101', 'SPDYC', 'MBD3L5', 'CRNN', 'LINC00113', 'CRLF2', 'NEU2', 'BEND2', 'HPD', 'OR8G2', 'OR14I1', 'SVOP', 'FAM71C', 'OLIG1', 'YIPF7', 'TPTE', 'IQCJ', 'OTOL1', 'IZUMO1R', 'LIPN', 'PRDM14', 'CYLC2', 'OR10H2', 'FAM27L', 'LRRTM1', 'OLAH', 'PRKAG3', 'HOXC12', 'PSG11', 'LOC285847', 'TARM1', 'DNTT', 'XAGE3', 'ALPPL2', 'FTMT', 'TCEB3C', 'FRMPD4', 'RHAG', 'SNORD115-26', 'GUCY2EP', 'KRTAP10-7', 'NANOS2', 'KRTAP10-1', 'SCN1A', 'KRT85', 'DEFB110', 'DAW1', 'OR4D6', 'LPO', 'BARHL2', 'OPRD1', 'DISC2', 'OR5H6', 'ABRA', 'OR5M10', 'IL17F', 'UGT2A3', 'C9ORF135', 'XKR7', 'PYDC2', 'UCMA', 'NKX1-2', 'LOC646813', 'OR1L1', 'TFF2', 'F11', 'OR6B2', 'SNORA59B', 'LCE1D', 'C20ORF166-AS1', 'PISRT1', 'TTTY15', 'C1ORF146', 'LCN9', 'TBC1D3P2', 'SNORA16B', 'FBXW12', 'MYBPC2', 'TMEM207', 'EPS8L3', 'SPATA19', 'SLC2A2', 'TTTY9B', 'TTTY8', 'ANXA8L1', 'SBSN', 'ADAM29', 'REG4', 'CHIAP2', 'ANP32D', 'GRK1', 'SPACA3', 'IGLL3P', 'CXADRP2', 'CETN1', 'IL26', 'CGB8', 'OR2M7', 'HBG2', 'FRMPD2B', 'CPLX3', 'OR4C12', 'ZNF679', 'SULT1C3', 'IVL', 'GUCY2F', 'GAGE2B', 'KRTAP21-1', 'SNORD94', 'PCGEM1', 'LMNTD1', 'MAGEA1', 'UGT1A5', 'DEFB134', 'CALR3', 'PSKH2', 'SNCB', 'FKBP6', 'PRAMEF1', 'MOGAT3', 'CYP7A1', 'POM121L2', 'CNGB1', 'GBX2', 'OR1E2', 'OR51I2', 'NYX', 'HAO1', 'LYZL1', 'OR51G2', 'NKX2-1', 'OR52E8', 'ZNF705A', 'OR5M8', 'LOC729609', 'OR6K6', 'GOLGA6L1', 'LINC00032', 'SATB2-AS1', 'ALX4', 'CCL24', 'FAM74A3', 'LINC00923', 'KCNK4', 'SNORA1', 'SNAR-F', 'SNORA84', 'TMEM88B', 'HTR3E', 'SLITRK3', 'SYCN', 'SLC25A31', 'KRTAP19-6', 'LINC00608', 'IFNA13', 'TSKS', 'SRY', 'TRHR', 'RPL3L', 'MAP3K15', 'BMP15', 'CRYGB', 'KGFLP1', 'ALLC', 'C10ORF120', 'DMRTB1', 'KRTAP2-1', 'NTS', 'INSC', 'DPPA2', 'RAX2', 'MUSK', 'CLRN1-AS1', 'TRIML1', 'TFAMP1', 'DKFZP434K028', 'FFAR1', 'KCNIP4-IT1', 'PROKR2', 'SLC6A5', 'NLRP13', 'POU6F2', 'FAM138D', 'LOC286238', 'OACYLP', 'CT47B1', 'OR1K1', 'GDPD2', 'DEFB123', 'ADGRD2', 'ANGPTL3', 'OR51F2', 'NKX2-3', 'KCNMB2', 'SLC36A3', 'CD200R1L', 'LCN1', 'MGC27382', 'MUC2', 'SPRR2E', 'LINC00520', 'MAGEA9B', 'GAGE12F', 'FOXD4L3', 'KIR3DL3', 'PTX4', 'AKR1C8P', 'CDRT15', 'GCSAML-AS1', 'LINC00575', 'IFNA7', 'LINC00479', 'HGC6.3', 'OR6A2', 'SLC10A1', 'CTRC', 'LINC00202-2', 'OR13C3', 'LINC01565', 'KRT25', 'ARL13A', 'KRTAP19-3', 'PAPOLB', 'MTVR2', 'SLC9C1', 'ADGRG4', 'IL36RN', 'LRRC30', 'KRTAP9-2', 'USP26', 'C12ORF50', 'KRT71', 'TRIM48', 'LHCGR', 'FAM71B', 'USP17L6P', 'BPIFB4', 'C6ORF10', 'OR7D4', 'LINC00303', 'USH1C', 'OCSTAMP', 'EDDM3B', 'CSN3', 'DAZ1', 'KRTAP10-6', 'OR2M4', 'DMRTC1', 'MAGEA6', 'ODF3', 'TNP1', 'AMER3', 'HULC', 'OR10W1', 'OR12D2', 'FOXR1', 'OR7G3', 'SLC17A6', 'PRB4', 'LINC01312', 'RPS4Y2', 'LINC00410', 'GUCA1C', 'KRTAP1-1', 'NKAIN3', 'NEUROD1', 'AQP2', 'XIRP2', 'CER1', 'SPOCK3', 'ACSM4', 'FAM170B', 'SPZ1', 'OR5M3', 'GKN2', 'KRTAP4-3', 'KRTAP1-5', 'FAM224B', 'ACSM2B', 'CRYGC', 'BTF3P11', 'OVCH1', 'BCYRN1', 'POTEG', 'BTN1A1', 'OR51B5', 'CHRNB3', 'GNAT3', 'FAM205A', 'LOC647859', 'HTR1A', 'PTH2', 'CALCB', 'SLC5A8', 'SLC5A7', 'OR1L4', 'LINC00304', 'TDH', 'HBE1', 'DMP1', 'MAGEB3', 'CNTN5', 'FAM19A1', 'OR2T10', 'FAM19A4', 'OR2AG1', 'FBXO47', 'HCRTR1', 'SHH', 'KCNG4', 'PRAC1', 'OR51M1', 'NLRP8', 'SHD', 'BPIFB3', 'SPANXN3', 'AHSG', 'OR13H1', 'SSX9', 'SERPINB12', 'LOC284798', 'LINC00671', 'NUTM1', 'KRT83', 'RFX6', 'SCTR', 'NCAN', 'LINC01142', 'OR7G2', 'AATK-AS1', 'H3F3AP5', 'SLC22A10', 'KRTAP11-1', 'FAM138B', 'C2ORF27B', 'GPHA2', 'DSCR10', 'CRISP2', 'UROC1', 'PPP1R2P9', 'DCT', 'PRL', 'POU4F2', 'HTR2C', 'NYAP2', 'SNORA76C', 'AVP', 'OR2G6', 'PTCHD3', 'AADACL3', 'TMEM14E', 'CLEC4G', 'HIST1H3A', 'PCP4', 'PPY2P', 'UGT1A4', 'GPR22', 'OR5H2', 'AIRE', 'KLRC4', 'OR2L8', 'AKR1D1', 'KCNJ16', 'TRIM75P', 'TRIM55', 'ARL14', 'CPA2', 'NF1P2', 'ISL1', 'ASB15', 'SPATA22', 'SPATA3', 'SSTR3', 'HIST2H2AB', 'OR2A14', 'LINC00207', 'IFNW1', 'SPATA45', 'CNGA2', 'POU4F3', 'SLC22A13', 'C16ORF90', 'GFI1B', 'APCS', 'C6ORF118', 'LOC145845', 'SNORA71B', 'SNORA62', 'PPAN-P2RY11', 'PCDH8', 'SNORA80E', 'FOXE3', 'NXPE1', 'UGT2B10', 'DEFB131', 'CACNG7', 'PRO0611', 'DEFB118', 'PCSK2', 'USP50', 'FAM170A', 'GNAS-AS1', 'LOC392196', 'ZFY', 'LOC400794', 'C1ORF140', 'CT47A6', 'MYH16', 'MIR1-1HG', 'C1ORF94', 'CGB2', 'CT47A7', 'MYL2', 'TMEM132D', 'CA4', 'MAGEA12', 'IGLL1', 'SLC4A9', 'LOC100132831', 'LRRC74A', 'OR10AD1', 'OR4D10', 'CALHM3', 'GH2', 'TDRG1', 'HPVC1', 'TMPRSS11B', 'HBM', 'SLC39A12', 'SLC22A12', 'IFNL1', 'RAPGEF4-AS1', 'ANKRD34C', 'ART1', 'GABRB1', 'OR2A12', 'DNAJC25-GNG10', 'LINC00710', 'ASB10', 'OR2A2', 'ZFAT-AS1', 'LINC00691', 'SH2D7', 'LINC01591', 'LINC00452', 'SCGB3A2', 'FAM47C', 'CSNK1A1P1', 'PRR32', 'SNORA72', 'GPR139', 'NEUROD6', 'KRTAP6-2', 'OR5B17', 'PDX1', 'ADRB3', 'GBA3', 'MTNR1A', 'GPR50', 'SPRR1B', 'MUC13', 'GPR61', 'KRTAP12-1', 'GSC2', 'GPRC6A', 'ANKRD20A20P', 'TRPM3', 'FERD3L', 'VIL1', 'CST9L', 'APOA5', 'NEUROG1', 'B4GALNT2', 'SNORA27', 'LHFPL4', 'C11ORF87', 'PRAMEF16', 'OR51L1', 'NKX6-2', 'SNORA2B', 'PRDM9', 'BANF2', 'PRSS1', 'PRSS57', 'OR51T1', 'VWA5B1', 'ZSCAN10', 'TKTL1', 'VSTM5', 'OTOP1', 'PRSS48', 'PAEP', 'SERPINB11', 'LINC00336', 'SPINK14', 'SNORA16A', 'RAET1L', 'SST', 'SSX2', 'CDHR5', 'NPSR1-AS1', 'C4ORF50', 'FOXG1', 'B3GALT1', 'TMEM252', 'PSAPL1', 'GOLGA2P6', 'PACRG-AS1', 'INS-IGF2', 'ZG16', 'MT1B', 'BET1P1', 'ITPK1-AS1', 'HYMAI', 'NHLH2', 'FAM71E2', 'FEZF1', 'OR52K2', 'NPY', 'MEP1A', 'OR2T2', 'SYT14P1', 'ADGRE3', 'OR3A2', 'SCARNA8', 'TRIM49', 'TRIM49D2', 'CLLU1', 'MAGEA11', 'OR2K2', 'BAGE', 'C9ORF171', 'NPSR1', 'CLEC4M', 'GJB4', 'ACTL7B', 'LINC00244', 'CPN1', 'OTC', 'CTRB2', 'FRMPD2', 'C1ORF158', 'SPINT3', 'GCGR', 'OR4D1', 'SNORA67', 'GCKR', 'C17ORF78', 'SNORA38', 'NPPC', 'MBL2', 'KLK13', 'KRTAP3-2', 'TAS2R42', 'CCER1', 'RNF222', 'SLCO1A2', 'DACH2', 'IFNL2', 'CACNG3', 'PASD1', 'LOC100130264', 'IL13', 'FER1L6', 'DMRTC2', 'CYP1A2', 'OPRM1', 'OR12D3', 'FAM9B', 'FRG2DP', 'CMTM5', 'TNP2', 'TP53TG5', 'LINC00964', 'CHRNA9', 'MAS1L', 'CCDC54', 'F2', 'C12ORF56', 'CLRN1', 'S100A12', 'OR5M1', 'CYP2A7', 'OR5K1', 'POU4F1', 'ATOH7', 'VCX3A', 'MYADML', 'SLITRK1', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999903673458 Coefficient of Determination: 1.0 RMSE: 2.1310434812767775e-15 NRMSE: 7.727135366339883e-16 MAPE: 1.825513655863764e-12 Pearson Correlation: -0.0030765259190088214 Spearman Correlation: -0.12856768787640743 Coefficient of Determination: -1.435663650678682 RMSE: 0.7720930874905017 NRMSE: 0.21466409605630127 MAPE: 322.85936948949166 Predictor: ElasticNet Pearson Correlation: 0.8428387208038187 Spearman Correlation: 0.8384094083138187 Coefficient of Determination: 0.6575224703121023 RMSE: 0.2639348920319861 NRMSE: 0.09570244138845779 MAPE: 151.32398880347642 Pearson Correlation: 0.22229838586862694 Spearman Correlation: 0.1775358794997444 Coefficient of Determination: 0.004788190140014303 RMSE: 0.49353592093635645 NRMSE: 0.13721718799926502 MAPE: 171.807516315177 Predictor: RandomForests Pearson Correlation: 0.5584335955123144 Spearman Correlation: 0.5985177923161137 Coefficient of Determination: 0.29782252219696903 RMSE: 0.3779237750461389 NRMSE: 0.13703465901080866 MAPE: 235.9837146878065 Pearson Correlation: 0.39497203410823856 Spearman Correlation: 0.37149932418056936 Coefficient of Determination: 0.13193391942372013 RMSE: 0.46093257340482946 NRMSE: 0.128152519192279 MAPE: 160.7865641549526 Fold: 4 Protein: RB1 x_train_column_count: 1003 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'DEFB109P1', 'OR8J3', 'TXLNGY', 'OR52B4', 'IFNA16', 'LINC00111', 'SNORA20', 'RAB9BP1', 'DAZL', 'OR5AN1', 'OR2T34', 'F13B', 'KRTAP19-8', 'OR11L1', 'LGALS14', 'SST', 'HBG1', 'OR2M3', 'SNORD15A', 'OTX2', 'FAM183CP', 'CLEC6A', 'OR10V1', 'NXF2B', 'TMPRSS11F', 'GPR151', 'OR8S1', 'OR2M7', 'OR5H14', 'PRM3', 'MS4A6E', 'OR8G5', 'DNAJB8', 'OR2G2', 'FGF23', 'MBD3L5', 'SCGB1C1', 'OR8B3', 'OR10A5', 'WFDC5', 'TCP10L2', 'TMEM252', 'ACOT12', 'LOC145845', 'PRSS3P2', 'PPY', 'MAGEB10', 'LINC01205', 'TAAR9', 'TSGA13', 'PLA2G2F', 'PSAPL1', 'SUN3', 'PSG7', 'CRYAA', 'USP26', 'SPRR1B', 'TTTY14', 'KRTAP10-12', 'OR1S2', 'OR2AG1', 'PRAMEF8', 'HIST1H4F', 'NPPC', 'SNORD89', 'MC2R', 'C1ORF87', 'NOX3', 'C20ORF173', 'LEUTX', 'SFTA3', 'FOXN3-AS2', 'XAGE5', 'LOC391003', 'VWC2L', 'LINC00636', 'SDR16C6P', 'FAM169B', 'LOC391343', 'ACTRT2', 'RPL13AP17', 'SLC5A7', 'ALOX12B', 'CAPZA3', 'KRTAP19-1', 'OR4S1', 'BMP10', 'OR5B2', 'TTTY15', 'OPN1MW', 'RTP2', 'SLC38A8', 'C10ORF53', 'OR4D9', 'FMR1NB', 'P2RX3', 'ARHGAP36', 'ARR3', 'CCKBR', 'SNORA70B', 'STATH', 'CASC8', 'TBC1D28', 'C11ORF94', 'KRT39', 'OR1N1', 'C1ORF94', 'SNORA34', 'TAS2R60', 'ACTR3BP2', 'SSX8', 'HNRNPCL1', 'IFITM5', 'ANKRD18DP', 'PF4', 'BEND2', 'GAGE1', 'PROKR1', 'EDDM3A', 'CABS1', 'BPIFA3', 'KHDC1L', 'LINC00029', 'MMP23A', 'DEFB129', 'OR4C16', 'AKAP14', 'CYP11B2', 'HBD', 'OR10S1', 'LINC00114', 'PRSS1', 'DEFB104A', 'HSFY2', 'CABP5', 'CYP2W1', 'CYP3A4', 'SFTPC', 'CGB5', 'CCL15-CCL14', 'DMRT1', 'RGS8', 'PROP1', 'TKTL2', 'SERPINB4', 'CLRN2', 'KCNQ1DN', 'PRAP1', 'LINC00469', 'YWHAEP7', 'SNORA51', 'KRTAP25-1', 'DUXA', 'SNORA32', 'OR4F5', 'XKR7', 'OTP', 'SNORA54', 'SLC13A1', 'LHX9', 'SVOP', 'LGI3', 'KRTAP6-1', 'PAGE2', 'LOC646813', 'MYBPHL', 'OR6Y1', 'OR4K17', 'KRTAP19-2', 'TAS2R13', 'GAGE2D', 'OR7A17', 'OR2T35', 'FBP2', 'SPACA7', 'KRTAP19-3', 'ANKUB1', 'LOC285627', 'PLET1', 'GABRG3', 'INS', 'AVPR1B', 'PRAMEF20', 'OR4K2', 'NEU2', 'MGC27382', 'FCAMR', 'TCP10', 'LCNL1', 'CRLF2', 'LINC01101', 'OTOL1', 'DNTT', 'FDCSP', 'KRT85', 'FAM71C', 'C3ORF49', 'ZFAT-AS1', 'FOXE1', 'OR6B3', 'LINC00113', 'HPD', 'C9ORF135', 'IFNA13', 'KRTAP4-5', 'OR10H2', 'IZUMO1R', 'OLIG1', 'OR1L3', 'OR8H2', 'PRDM14', 'FGF6', 'XAGE3', 'SCARNA20', 'DAW1', 'GH1', 'TCEB3C', 'CCDC166', 'TMEM207', 'UGT2A3', 'PTF1A', 'SPANXN1', 'FAM27L', 'OR14I1', 'OR8G2', 'OR1L1', 'OLAH', 'PSG11', 'DEFB108B', 'DEFA4', 'ALPPL2', 'CYLC2', 'PRKAG3', 'SNORA47', 'SPATA19', 'IL26', 'FGA', 'PRG1', 'OR51I2', 'CER1', 'LINC00923', 'BARHL2', 'KRTAP10-1', 'C17ORF78', 'SLC25A31', 'SULT1C3', 'IVL', 'NANOS2', 'LCN9', 'HBBP1', 'LCE1D', 'PYDC2', 'TFF2', 'NKX2-1', 'ZNF479', 'PISRT1', 'OR5H6', 'GYS2', 'GUCY2EP', 'FTMT', 'LINC00696', 'DEFB110', 'OPRD1', 'OR4D6', 'MYBPC2', 'EPS8L3', 'LPO', 'TARM1', 'OR7E24', 'SCGB1A1', 'UCMA', 'HOXC12', 'SCN1A', 'ENAM', 'FMO6P', 'OR1E2', 'GAGE2B', 'CPLX3', 'OR14C36', 'OR6B2', 'OR1B1', 'LOC729609', 'CLCA4', 'OR6M1', 'RESP18', 'MAGEA9B', 'ST8SIA3', 'OR1K1', 'TTTY9B', 'CYP7A1', 'GBX2', 'PRAMEF1', 'SCARNA11', 'SBSN', 'HBZ', 'HBG2', 'GPR78', 'OR4C12', 'SERPINI2', 'FRMPD2B', 'ZNF679', 'SNORA59B', 'TTTY8', 'HAO1', 'LINC00326', 'SPATA31A3', 'FAM27B', 'KRTAP21-1', 'SLC1A6', 'LINC00488', 'HTR3E', 'SLITRK3', 'OR4M2', 'MAGEB6', 'OR2M4', 'C12ORF50', 'KRTAP19-6', 'LYZL1', 'ADGRD2', 'YIPF7', 'GPRC6A', 'OR12D2', 'CCL24', 'SYCN', 'SNAR-F', 'CGB8', 'LINC00608', 'NYX', 'ANP32D', 'ASB10', 'LOC286238', 'ANGPTL3', 'TMEM88B', 'ALX4', 'ALLC', 'OR6F1', 'SNORD94', 'OC90', 'CD200R1L', 'SNORA38B', 'OR6C74', 'LMNTD1', 'OR51G2', 'GPR148', 'FAM71B', 'DPPA2', 'BRINP3', 'OR6A2', 'SLC51B', 'OR6K6', 'DYDC1', 'OR51F2', 'POU6F2', 'GDPD2', 'DKFZP434K028', 'ADGRG4', 'FFAR1', 'MAP3K15', 'KRT13', 'KRTAP2-1', 'CNBD1', 'SRY', 'NTS', 'LINC00575', 'RAX2', 'LINC00934', 'SERPINB3', 'BET1P1', 'C10ORF120', 'MOGAT3', 'SPACA3', 'IL17F', 'IL36RN', 'ARID3C', 'OR11H4', 'SLC6A5', 'CNTN5', 'TRHR', 'SNORA37', 'TSKS', 'SNORA16B', 'LOC284798', 'OR13C3', 'KCNK4', 'TCERG1L', 'GUCA2B', 'LINC00304', 'OR2A14', 'KRT25', 'KCNMB2', 'SLC2A2', 'MYH1', 'IFNA7', 'LINC00410', 'APOC3', 'TMEM179', 'HBE1', 'BMP15', 'OR2L8', 'SLC22A12', 'SNORA71A', 'KIR3DL3', 'GAGE12F', 'LINC01312', 'PRB4', 'MUSK', 'SPRR2E', 'FAM25BP', 'NLRP8', 'OR2A2', 'SPATA31C1', 'ITIH1', 'SEC14L3', 'NKAIN3', 'RPS4Y2', 'SNORA74A', 'LINC00710', 'LINC00928', 'SNORA76C', 'ZNF705A', 'DCT', 'OR2AT4', 'FAM170B', 'GPR22', 'TDRG1', 'SLC17A6', 'OR56B1', 'MAGEB3', 'PAPOLB', 'MAGEA1', 'TNP1', 'LOC100130264', 'OR11H6', 'HTR1A', 'SSX6', 'LRRC30', 'USH1C', 'CSN3', 'OR10W1', 'PROKR2', 'SPANXN3', 'USP9Y', 'CFHR2', 'SOX3', 'CTRC', 'GDNF', 'EDDM3B', 'KCNIP4-IT1', 'EPPIN', 'GKN2', 'PAGE5', 'MUC2', 'GCSAML-AS1', 'DMRTC1', 'BTN1A1', 'FAM205A', 'OR51B5', 'BCYRN1', 'DMP1', 'PPY2P', 'SCP2D1', 'ZCCHC13', 'SCARNA8', 'CHRNB3', 'LOC647859', 'HPVC1', 'SPOCK3', 'HMHB1', 'OCSTAMP', 'SPZ1', 'CRYGC', 'BPIFB3', 'ADAM29', 'ACER1', 'MAGEA12', 'PTH2', 'KRTAP4-3', 'ZFY', 'BPIFB4', 'LINC00479', 'ANKRD34C', 'GAGE2C', 'SLC32A1', 'NXPE1', 'CCKAR', 'KRTAP1-1', 'KRTAP1-5', 'TRIM48', 'ZAR1L', 'ASB15', 'FAM19A4', 'OR2T10', 'MS4A10', 'NUTM1', 'TMEM14E', 'VRTN', 'C4ORF51', 'KRT83', 'OR4F21', 'C6ORF10', 'KRT71', 'KRT3', 'C2ORF27B', 'KRTAP11-1', 'DAOA', 'KLRC4', 'HMSD', 'SOX1', 'LOC644669', 'AATK-AS1', 'ODF3', 'SPATA3', 'MMP20', 'CT47A1', 'ATOH7', 'AVP', 'AIRE', 'TPTE', 'CLEC4G', 'LINC01142', 'KCNU1', 'BTF3P11', 'FOXD4L3', 'MTVR2', 'OR2G6', 'PPP1R2P9', 'AADACL3', 'SSX9', 'RFX6', 'OR6S1', 'AFM', 'AKR1D1', 'LRRC52', 'C1ORF146', 'ZNF735', 'LOC400940', 'OACYLP', 'EPB42', 'TBR1', 'ASAP1-IT1', 'PCP4', 'B3GNT6', 'FAM170A', 'SLC22A10', 'GFI1B', 'MTNR1B', 'BTNL3', 'GNAS-AS1', 'MYH16', 'CPA2', 'LINC00303', 'IGLL1', 'HCRTR1', 'CNGA2', 'CA4', 'SH2D7', 'INSM2', 'CA6', 'CLCA1', 'HULC', 'CACNG7', 'PRR32', 'PRL', 'NF1P2', 'ZIM3', 'HYALP1', 'CT47A11', 'KRTAP3-2', 'CFHR4', 'TMEM132D', 'KCNJ16', 'USP50', 'TSPEAR-AS2', 'UGT1A4', 'PLA2G12B', 'TRIM55', 'NEUROG1', 'SSTR3', 'C11ORF87', 'SNORA72', 'DISC2', 'SERPINB11', 'NEUROD6', 'PRAMEF16', 'LINC01591', 'SNORA2B', 'PRSS48', 'GSC2', 'SNORA27', 'VWA5B1', 'OR51F1', 'OR10AD1', 'SCGB3A2', 'FERD3L', 'LINC00691', 'GABRR3', 'NKX6-2', 'RAPGEF4-AS1', 'ADRB3', 'GAGE12J', 'FAM47C', 'OR51L1', 'POM121L2', 'OR5H2', 'KRTAP12-1', 'C17ORF64', 'COX7B2', 'IFNW1', 'HIST1H3A', 'ANKRD20A20P', 'SLC10A1', 'LINC00032', 'GSTA5', 'KRTAP9-2', 'OR4D10', 'APCS', 'CGB2', 'OR5B17', 'AADAC', 'IFNL1', 'ZSCAN10', 'MMD2', 'FER1L6', 'UTS2R', 'OR51T1', 'LINC00452', 'MCF2', 'ART1', 'C12ORF56', 'OR52K2', 'MAGEA5', 'PATE3', 'CYP2C18', 'BAGE', 'PRDM9', 'GCGR', 'APOA5', 'PACRG-AS1', 'OLIG3', 'SNORD15B', 'SPINK14', 'B3GALT1', 'REG1B', 'CST9L', 'OR2A12', 'INS-IGF2', 'ISL1', 'DACH2', 'OTOP1', 'MT1B', 'GPR52', 'PDX1', 'TRIM49', 'NPSR1-AS1', 'CNTNAP5', 'OR4D5', 'FOXG1', 'NPHS2', 'EPGN', 'HAND1', 'LOC100130417', 'OR4N4', 'MYADML', 'PRSS57', 'MUC13', 'CLRN1', 'LINC00052', 'FAM138B', 'TRIM75P', 'HBM', 'PPBPP1', 'HRK', 'NHLH2', 'TAS2R42', 'NEUROG3', 'EXD1', 'OR13H1', 'IGFBP1', 'OR5K1', 'MMP21', 'PSKH2', 'OR10G8', 'ACSM2A', 'SYT10', 'CPNE6', 'COL20A1', 'MAGEA11', 'MAS1L', 'MBL2', 'PSG4', 'SSX5', 'ALAS2', 'LINC00202-2', 'ADCYAP1R1', 'SPINT3', 'HYMAI', 'CLEC4M', 'OR3A2', 'NPSR1', 'OPRM1', 'PPAN-P2RY11', 'NYAP2', 'TNP2', 'SLITRK1', 'CCER1', 'HIST2H2AB', 'VCX3A', 'PWAR4', 'SFTPB', 'PASD1', 'SHD', 'SLCO4A1-AS1', 'POU4F2', 'CALHM3', 'KRTAP10-6', 'GPHA2', 'C4ORF50', 'LHCGR', 'ADGRG7', 'OR2T2', 'PNLIPRP1', 'LINC01565', 'NBPF22P', 'TMEM202', 'TNFSF18', 'CACNG3', 'OR2K2', 'OTC', 'SCARNA14', 'RNF151', 'LOC392196', 'IFNL2', 'ARL14', 'SNORD115-26', 'H3F3AP5', 'IQCF2', 'NXNL1', 'CYP1A2', 'F2', 'SALL3', 'LOC285629', 'FOXR1', 'NMUR2', 'SNORA68', 'AWAT1', 'SDC4P', 'SNORA16A', 'SCTR', 'KCNB2', 'AMER3', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.4418404221499863e-15 NRMSE: 5.272968191010775e-16 MAPE: 7.789537589264395e-12 Pearson Correlation: 0.026392963777080697 Spearman Correlation: 0.014870509607351715 Coefficient of Determination: -5.247862649406825 RMSE: 0.41213538457042365 NRMSE: 0.39487159829305146 MAPE: 468.3198398782947 Predictor: ElasticNet Pearson Correlation: 0.7251112818102458 Spearman Correlation: 0.5839438926453882 Coefficient of Determination: 0.4495398542336725 RMSE: 0.18660343990966927 NRMSE: 0.06824291980312656 MAPE: 281.56585534824785 Pearson Correlation: 0.21021116089030356 Spearman Correlation: 0.18822429207346725 Coefficient of Determination: -0.07506557459622543 RMSE: 0.17095887214219346 NRMSE: 0.16379763934981936 MAPE: 122.29366329040776 Predictor: RandomForests Pearson Correlation: 0.6032080181883488 Spearman Correlation: 0.46049464588899086 Coefficient of Determination: 0.175315788344081 RMSE: 0.22840233796683193 NRMSE: 0.08352923418915738 MAPE: 173.87153003234857 Pearson Correlation: 0.24530505363646346 Spearman Correlation: 0.24050235165688238 Coefficient of Determination: -0.01567694981951373 RMSE: 0.16616974930133385 NRMSE: 0.1592091262995189 MAPE: 101.54239096246418 Protein: CDH1 x_train_column_count: 1003 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'DEFB109P1', 'OR8J3', 'TXLNGY', 'OR52B4', 'IFNA16', 'LINC00111', 'SNORA20', 'RAB9BP1', 'DAZL', 'OR5AN1', 'OR2T34', 'F13B', 'KRTAP19-8', 'OR11L1', 'LGALS14', 'SST', 'HBG1', 'OR2M3', 'SNORD15A', 'OTX2', 'FAM183CP', 'CLEC6A', 'OR10V1', 'NXF2B', 'TMPRSS11F', 'GPR151', 'OR8S1', 'OR2M7', 'OR5H14', 'PRM3', 'MS4A6E', 'OR8G5', 'DNAJB8', 'OR2G2', 'FGF23', 'MBD3L5', 'SCGB1C1', 'OR8B3', 'OR10A5', 'WFDC5', 'TCP10L2', 'TMEM252', 'ACOT12', 'LOC145845', 'PRSS3P2', 'PPY', 'MAGEB10', 'LINC01205', 'TAAR9', 'TSGA13', 'PLA2G2F', 'PSAPL1', 'SUN3', 'PSG7', 'CRYAA', 'USP26', 'SPRR1B', 'TTTY14', 'KRTAP10-12', 'OR1S2', 'OR2AG1', 'PRAMEF8', 'HIST1H4F', 'NPPC', 'SNORD89', 'MC2R', 'C1ORF87', 'NOX3', 'C20ORF173', 'LEUTX', 'SFTA3', 'FOXN3-AS2', 'XAGE5', 'LOC391003', 'VWC2L', 'LINC00636', 'SDR16C6P', 'FAM169B', 'LOC391343', 'ACTRT2', 'RPL13AP17', 'SLC5A7', 'ALOX12B', 'CAPZA3', 'KRTAP19-1', 'OR4S1', 'BMP10', 'OR5B2', 'TTTY15', 'OPN1MW', 'RTP2', 'SLC38A8', 'C10ORF53', 'OR4D9', 'FMR1NB', 'P2RX3', 'ARHGAP36', 'ARR3', 'CCKBR', 'SNORA70B', 'STATH', 'CASC8', 'TBC1D28', 'C11ORF94', 'KRT39', 'OR1N1', 'C1ORF94', 'SNORA34', 'TAS2R60', 'ACTR3BP2', 'SSX8', 'HNRNPCL1', 'IFITM5', 'ANKRD18DP', 'PF4', 'BEND2', 'GAGE1', 'PROKR1', 'EDDM3A', 'CABS1', 'BPIFA3', 'KHDC1L', 'LINC00029', 'MMP23A', 'DEFB129', 'OR4C16', 'AKAP14', 'CYP11B2', 'HBD', 'OR10S1', 'LINC00114', 'PRSS1', 'DEFB104A', 'HSFY2', 'CABP5', 'CYP2W1', 'CYP3A4', 'SFTPC', 'CGB5', 'CCL15-CCL14', 'DMRT1', 'RGS8', 'PROP1', 'TKTL2', 'SERPINB4', 'CLRN2', 'KCNQ1DN', 'PRAP1', 'LINC00469', 'YWHAEP7', 'SNORA51', 'KRTAP25-1', 'DUXA', 'SNORA32', 'OR4F5', 'XKR7', 'OTP', 'SNORA54', 'SLC13A1', 'LHX9', 'SVOP', 'LGI3', 'KRTAP6-1', 'PAGE2', 'LOC646813', 'MYBPHL', 'OR6Y1', 'OR4K17', 'KRTAP19-2', 'TAS2R13', 'GAGE2D', 'OR7A17', 'OR2T35', 'FBP2', 'SPACA7', 'KRTAP19-3', 'ANKUB1', 'LOC285627', 'PLET1', 'GABRG3', 'INS', 'AVPR1B', 'PRAMEF20', 'OR4K2', 'NEU2', 'MGC27382', 'FCAMR', 'TCP10', 'LCNL1', 'CRLF2', 'LINC01101', 'OTOL1', 'DNTT', 'FDCSP', 'KRT85', 'FAM71C', 'C3ORF49', 'ZFAT-AS1', 'FOXE1', 'OR6B3', 'LINC00113', 'HPD', 'C9ORF135', 'IFNA13', 'KRTAP4-5', 'OR10H2', 'IZUMO1R', 'OLIG1', 'OR1L3', 'OR8H2', 'PRDM14', 'FGF6', 'XAGE3', 'SCARNA20', 'DAW1', 'GH1', 'TCEB3C', 'CCDC166', 'TMEM207', 'UGT2A3', 'PTF1A', 'SPANXN1', 'FAM27L', 'OR14I1', 'OR8G2', 'OR1L1', 'OLAH', 'PSG11', 'DEFB108B', 'DEFA4', 'ALPPL2', 'CYLC2', 'PRKAG3', 'SNORA47', 'SPATA19', 'IL26', 'FGA', 'PRG1', 'OR51I2', 'CER1', 'LINC00923', 'BARHL2', 'KRTAP10-1', 'C17ORF78', 'SLC25A31', 'SULT1C3', 'IVL', 'NANOS2', 'LCN9', 'HBBP1', 'LCE1D', 'PYDC2', 'TFF2', 'NKX2-1', 'ZNF479', 'PISRT1', 'OR5H6', 'GYS2', 'GUCY2EP', 'FTMT', 'LINC00696', 'DEFB110', 'OPRD1', 'OR4D6', 'MYBPC2', 'EPS8L3', 'LPO', 'TARM1', 'OR7E24', 'SCGB1A1', 'UCMA', 'HOXC12', 'SCN1A', 'ENAM', 'FMO6P', 'OR1E2', 'GAGE2B', 'CPLX3', 'OR14C36', 'OR6B2', 'OR1B1', 'LOC729609', 'CLCA4', 'OR6M1', 'RESP18', 'MAGEA9B', 'ST8SIA3', 'OR1K1', 'TTTY9B', 'CYP7A1', 'GBX2', 'PRAMEF1', 'SCARNA11', 'SBSN', 'HBZ', 'HBG2', 'GPR78', 'OR4C12', 'SERPINI2', 'FRMPD2B', 'ZNF679', 'SNORA59B', 'TTTY8', 'HAO1', 'LINC00326', 'SPATA31A3', 'FAM27B', 'KRTAP21-1', 'SLC1A6', 'LINC00488', 'HTR3E', 'SLITRK3', 'OR4M2', 'MAGEB6', 'OR2M4', 'C12ORF50', 'KRTAP19-6', 'LYZL1', 'ADGRD2', 'YIPF7', 'GPRC6A', 'OR12D2', 'CCL24', 'SYCN', 'SNAR-F', 'CGB8', 'LINC00608', 'NYX', 'ANP32D', 'ASB10', 'LOC286238', 'ANGPTL3', 'TMEM88B', 'ALX4', 'ALLC', 'OR6F1', 'SNORD94', 'OC90', 'CD200R1L', 'SNORA38B', 'OR6C74', 'LMNTD1', 'OR51G2', 'GPR148', 'FAM71B', 'DPPA2', 'BRINP3', 'OR6A2', 'SLC51B', 'OR6K6', 'DYDC1', 'OR51F2', 'POU6F2', 'GDPD2', 'DKFZP434K028', 'ADGRG4', 'FFAR1', 'MAP3K15', 'KRT13', 'KRTAP2-1', 'CNBD1', 'SRY', 'NTS', 'LINC00575', 'RAX2', 'LINC00934', 'SERPINB3', 'BET1P1', 'C10ORF120', 'MOGAT3', 'SPACA3', 'IL17F', 'IL36RN', 'ARID3C', 'OR11H4', 'SLC6A5', 'CNTN5', 'TRHR', 'SNORA37', 'TSKS', 'SNORA16B', 'LOC284798', 'OR13C3', 'KCNK4', 'TCERG1L', 'GUCA2B', 'LINC00304', 'OR2A14', 'KRT25', 'KCNMB2', 'SLC2A2', 'MYH1', 'IFNA7', 'LINC00410', 'APOC3', 'TMEM179', 'HBE1', 'BMP15', 'OR2L8', 'SLC22A12', 'SNORA71A', 'KIR3DL3', 'GAGE12F', 'LINC01312', 'PRB4', 'MUSK', 'SPRR2E', 'FAM25BP', 'NLRP8', 'OR2A2', 'SPATA31C1', 'ITIH1', 'SEC14L3', 'NKAIN3', 'RPS4Y2', 'SNORA74A', 'LINC00710', 'LINC00928', 'SNORA76C', 'ZNF705A', 'DCT', 'OR2AT4', 'FAM170B', 'GPR22', 'TDRG1', 'SLC17A6', 'OR56B1', 'MAGEB3', 'PAPOLB', 'MAGEA1', 'TNP1', 'LOC100130264', 'OR11H6', 'HTR1A', 'SSX6', 'LRRC30', 'USH1C', 'CSN3', 'OR10W1', 'PROKR2', 'SPANXN3', 'USP9Y', 'CFHR2', 'SOX3', 'CTRC', 'GDNF', 'EDDM3B', 'KCNIP4-IT1', 'EPPIN', 'GKN2', 'PAGE5', 'MUC2', 'GCSAML-AS1', 'DMRTC1', 'BTN1A1', 'FAM205A', 'OR51B5', 'BCYRN1', 'DMP1', 'PPY2P', 'SCP2D1', 'ZCCHC13', 'SCARNA8', 'CHRNB3', 'LOC647859', 'HPVC1', 'SPOCK3', 'HMHB1', 'OCSTAMP', 'SPZ1', 'CRYGC', 'BPIFB3', 'ADAM29', 'ACER1', 'MAGEA12', 'PTH2', 'KRTAP4-3', 'ZFY', 'BPIFB4', 'LINC00479', 'ANKRD34C', 'GAGE2C', 'SLC32A1', 'NXPE1', 'CCKAR', 'KRTAP1-1', 'KRTAP1-5', 'TRIM48', 'ZAR1L', 'ASB15', 'FAM19A4', 'OR2T10', 'MS4A10', 'NUTM1', 'TMEM14E', 'VRTN', 'C4ORF51', 'KRT83', 'OR4F21', 'C6ORF10', 'KRT71', 'KRT3', 'C2ORF27B', 'KRTAP11-1', 'DAOA', 'KLRC4', 'HMSD', 'SOX1', 'LOC644669', 'AATK-AS1', 'ODF3', 'SPATA3', 'MMP20', 'CT47A1', 'ATOH7', 'AVP', 'AIRE', 'TPTE', 'CLEC4G', 'LINC01142', 'KCNU1', 'BTF3P11', 'FOXD4L3', 'MTVR2', 'OR2G6', 'PPP1R2P9', 'AADACL3', 'SSX9', 'RFX6', 'OR6S1', 'AFM', 'AKR1D1', 'LRRC52', 'C1ORF146', 'ZNF735', 'LOC400940', 'OACYLP', 'EPB42', 'TBR1', 'ASAP1-IT1', 'PCP4', 'B3GNT6', 'FAM170A', 'SLC22A10', 'GFI1B', 'MTNR1B', 'BTNL3', 'GNAS-AS1', 'MYH16', 'CPA2', 'LINC00303', 'IGLL1', 'HCRTR1', 'CNGA2', 'CA4', 'SH2D7', 'INSM2', 'CA6', 'CLCA1', 'HULC', 'CACNG7', 'PRR32', 'PRL', 'NF1P2', 'ZIM3', 'HYALP1', 'CT47A11', 'KRTAP3-2', 'CFHR4', 'TMEM132D', 'KCNJ16', 'USP50', 'TSPEAR-AS2', 'UGT1A4', 'PLA2G12B', 'TRIM55', 'NEUROG1', 'SSTR3', 'C11ORF87', 'SNORA72', 'DISC2', 'SERPINB11', 'NEUROD6', 'PRAMEF16', 'LINC01591', 'SNORA2B', 'PRSS48', 'GSC2', 'SNORA27', 'VWA5B1', 'OR51F1', 'OR10AD1', 'SCGB3A2', 'FERD3L', 'LINC00691', 'GABRR3', 'NKX6-2', 'RAPGEF4-AS1', 'ADRB3', 'GAGE12J', 'FAM47C', 'OR51L1', 'POM121L2', 'OR5H2', 'KRTAP12-1', 'C17ORF64', 'COX7B2', 'IFNW1', 'HIST1H3A', 'ANKRD20A20P', 'SLC10A1', 'LINC00032', 'GSTA5', 'KRTAP9-2', 'OR4D10', 'APCS', 'CGB2', 'OR5B17', 'AADAC', 'IFNL1', 'ZSCAN10', 'MMD2', 'FER1L6', 'UTS2R', 'OR51T1', 'LINC00452', 'MCF2', 'ART1', 'C12ORF56', 'OR52K2', 'MAGEA5', 'PATE3', 'CYP2C18', 'BAGE', 'PRDM9', 'GCGR', 'APOA5', 'PACRG-AS1', 'OLIG3', 'SNORD15B', 'SPINK14', 'B3GALT1', 'REG1B', 'CST9L', 'OR2A12', 'INS-IGF2', 'ISL1', 'DACH2', 'OTOP1', 'MT1B', 'GPR52', 'PDX1', 'TRIM49', 'NPSR1-AS1', 'CNTNAP5', 'OR4D5', 'FOXG1', 'NPHS2', 'EPGN', 'HAND1', 'LOC100130417', 'OR4N4', 'MYADML', 'PRSS57', 'MUC13', 'CLRN1', 'LINC00052', 'FAM138B', 'TRIM75P', 'HBM', 'PPBPP1', 'HRK', 'NHLH2', 'TAS2R42', 'NEUROG3', 'EXD1', 'OR13H1', 'IGFBP1', 'OR5K1', 'MMP21', 'PSKH2', 'OR10G8', 'ACSM2A', 'SYT10', 'CPNE6', 'COL20A1', 'MAGEA11', 'MAS1L', 'MBL2', 'PSG4', 'SSX5', 'ALAS2', 'LINC00202-2', 'ADCYAP1R1', 'SPINT3', 'HYMAI', 'CLEC4M', 'OR3A2', 'NPSR1', 'OPRM1', 'PPAN-P2RY11', 'NYAP2', 'TNP2', 'SLITRK1', 'CCER1', 'HIST2H2AB', 'VCX3A', 'PWAR4', 'SFTPB', 'PASD1', 'SHD', 'SLCO4A1-AS1', 'POU4F2', 'CALHM3', 'KRTAP10-6', 'GPHA2', 'C4ORF50', 'LHCGR', 'ADGRG7', 'OR2T2', 'PNLIPRP1', 'LINC01565', 'NBPF22P', 'TMEM202', 'TNFSF18', 'CACNG3', 'OR2K2', 'OTC', 'SCARNA14', 'RNF151', 'LOC392196', 'IFNL2', 'ARL14', 'SNORD115-26', 'H3F3AP5', 'IQCF2', 'NXNL1', 'CYP1A2', 'F2', 'SALL3', 'LOC285629', 'FOXR1', 'NMUR2', 'SNORA68', 'AWAT1', 'SDC4P', 'SNORA16A', 'SCTR', 'KCNB2', 'AMER3', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.635739105580343e-15 NRMSE: 7.38151508802322e-16 MAPE: 3.429574945657306e-12 Pearson Correlation: 0.16070052622451989 Spearman Correlation: 0.13540069078168057 Coefficient of Determination: -1.729461802189264 RMSE: 1.927096961234541 NRMSE: 0.3496057765020393 MAPE: 786.9440083075557 Predictor: ElasticNet Pearson Correlation: 0.9250982948443434 Spearman Correlation: 0.8991963631416305 Coefficient of Determination: 0.8302118581089342 RMSE: 0.46109259897099486 NRMSE: 0.07342005015301978 MAPE: 193.63863442003895 Pearson Correlation: 0.4281680795341424 Spearman Correlation: 0.36058055586728016 Coefficient of Determination: 0.11390841543317876 RMSE: 1.0980051121393541 NRMSE: 0.19919544140984619 MAPE: 409.3976092397551 Predictor: RandomForests Pearson Correlation: 0.745324597599403 Spearman Correlation: 0.6916423937507932 Coefficient of Determination: 0.5502538923560027 RMSE: 0.7504438110452306 NRMSE: 0.11949361661176881 MAPE: 237.25448270597246 Pearson Correlation: 0.7594994644970473 Spearman Correlation: 0.41629586356280135 Coefficient of Determination: 0.5167019137472699 RMSE: 0.8109098837919212 NRMSE: 0.14711183988097695 MAPE: 142.48947354298198 Protein: CDH2 x_train_column_count: 1003 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'DEFB109P1', 'OR8J3', 'TXLNGY', 'OR52B4', 'IFNA16', 'LINC00111', 'SNORA20', 'RAB9BP1', 'DAZL', 'OR5AN1', 'OR2T34', 'F13B', 'KRTAP19-8', 'OR11L1', 'LGALS14', 'SST', 'HBG1', 'OR2M3', 'SNORD15A', 'OTX2', 'FAM183CP', 'CLEC6A', 'OR10V1', 'NXF2B', 'TMPRSS11F', 'GPR151', 'OR8S1', 'OR2M7', 'OR5H14', 'PRM3', 'MS4A6E', 'OR8G5', 'DNAJB8', 'OR2G2', 'FGF23', 'MBD3L5', 'SCGB1C1', 'OR8B3', 'OR10A5', 'WFDC5', 'TCP10L2', 'TMEM252', 'ACOT12', 'LOC145845', 'PRSS3P2', 'PPY', 'MAGEB10', 'LINC01205', 'TAAR9', 'TSGA13', 'PLA2G2F', 'PSAPL1', 'SUN3', 'PSG7', 'CRYAA', 'USP26', 'SPRR1B', 'TTTY14', 'KRTAP10-12', 'OR1S2', 'OR2AG1', 'PRAMEF8', 'HIST1H4F', 'NPPC', 'SNORD89', 'MC2R', 'C1ORF87', 'NOX3', 'C20ORF173', 'LEUTX', 'SFTA3', 'FOXN3-AS2', 'XAGE5', 'LOC391003', 'VWC2L', 'LINC00636', 'SDR16C6P', 'FAM169B', 'LOC391343', 'ACTRT2', 'RPL13AP17', 'SLC5A7', 'ALOX12B', 'CAPZA3', 'KRTAP19-1', 'OR4S1', 'BMP10', 'OR5B2', 'TTTY15', 'OPN1MW', 'RTP2', 'SLC38A8', 'C10ORF53', 'OR4D9', 'FMR1NB', 'P2RX3', 'ARHGAP36', 'ARR3', 'CCKBR', 'SNORA70B', 'STATH', 'CASC8', 'TBC1D28', 'C11ORF94', 'KRT39', 'OR1N1', 'C1ORF94', 'SNORA34', 'TAS2R60', 'ACTR3BP2', 'SSX8', 'HNRNPCL1', 'IFITM5', 'ANKRD18DP', 'PF4', 'BEND2', 'GAGE1', 'PROKR1', 'EDDM3A', 'CABS1', 'BPIFA3', 'KHDC1L', 'LINC00029', 'MMP23A', 'DEFB129', 'OR4C16', 'AKAP14', 'CYP11B2', 'HBD', 'OR10S1', 'LINC00114', 'PRSS1', 'DEFB104A', 'HSFY2', 'CABP5', 'CYP2W1', 'CYP3A4', 'SFTPC', 'CGB5', 'CCL15-CCL14', 'DMRT1', 'RGS8', 'PROP1', 'TKTL2', 'SERPINB4', 'CLRN2', 'KCNQ1DN', 'PRAP1', 'LINC00469', 'YWHAEP7', 'SNORA51', 'KRTAP25-1', 'DUXA', 'SNORA32', 'OR4F5', 'XKR7', 'OTP', 'SNORA54', 'SLC13A1', 'LHX9', 'SVOP', 'LGI3', 'KRTAP6-1', 'PAGE2', 'LOC646813', 'MYBPHL', 'OR6Y1', 'OR4K17', 'KRTAP19-2', 'TAS2R13', 'GAGE2D', 'OR7A17', 'OR2T35', 'FBP2', 'SPACA7', 'KRTAP19-3', 'ANKUB1', 'LOC285627', 'PLET1', 'GABRG3', 'INS', 'AVPR1B', 'PRAMEF20', 'OR4K2', 'NEU2', 'MGC27382', 'FCAMR', 'TCP10', 'LCNL1', 'CRLF2', 'LINC01101', 'OTOL1', 'DNTT', 'FDCSP', 'KRT85', 'FAM71C', 'C3ORF49', 'ZFAT-AS1', 'FOXE1', 'OR6B3', 'LINC00113', 'HPD', 'C9ORF135', 'IFNA13', 'KRTAP4-5', 'OR10H2', 'IZUMO1R', 'OLIG1', 'OR1L3', 'OR8H2', 'PRDM14', 'FGF6', 'XAGE3', 'SCARNA20', 'DAW1', 'GH1', 'TCEB3C', 'CCDC166', 'TMEM207', 'UGT2A3', 'PTF1A', 'SPANXN1', 'FAM27L', 'OR14I1', 'OR8G2', 'OR1L1', 'OLAH', 'PSG11', 'DEFB108B', 'DEFA4', 'ALPPL2', 'CYLC2', 'PRKAG3', 'SNORA47', 'SPATA19', 'IL26', 'FGA', 'PRG1', 'OR51I2', 'CER1', 'LINC00923', 'BARHL2', 'KRTAP10-1', 'C17ORF78', 'SLC25A31', 'SULT1C3', 'IVL', 'NANOS2', 'LCN9', 'HBBP1', 'LCE1D', 'PYDC2', 'TFF2', 'NKX2-1', 'ZNF479', 'PISRT1', 'OR5H6', 'GYS2', 'GUCY2EP', 'FTMT', 'LINC00696', 'DEFB110', 'OPRD1', 'OR4D6', 'MYBPC2', 'EPS8L3', 'LPO', 'TARM1', 'OR7E24', 'SCGB1A1', 'UCMA', 'HOXC12', 'SCN1A', 'ENAM', 'FMO6P', 'OR1E2', 'GAGE2B', 'CPLX3', 'OR14C36', 'OR6B2', 'OR1B1', 'LOC729609', 'CLCA4', 'OR6M1', 'RESP18', 'MAGEA9B', 'ST8SIA3', 'OR1K1', 'TTTY9B', 'CYP7A1', 'GBX2', 'PRAMEF1', 'SCARNA11', 'SBSN', 'HBZ', 'HBG2', 'GPR78', 'OR4C12', 'SERPINI2', 'FRMPD2B', 'ZNF679', 'SNORA59B', 'TTTY8', 'HAO1', 'LINC00326', 'SPATA31A3', 'FAM27B', 'KRTAP21-1', 'SLC1A6', 'LINC00488', 'HTR3E', 'SLITRK3', 'OR4M2', 'MAGEB6', 'OR2M4', 'C12ORF50', 'KRTAP19-6', 'LYZL1', 'ADGRD2', 'YIPF7', 'GPRC6A', 'OR12D2', 'CCL24', 'SYCN', 'SNAR-F', 'CGB8', 'LINC00608', 'NYX', 'ANP32D', 'ASB10', 'LOC286238', 'ANGPTL3', 'TMEM88B', 'ALX4', 'ALLC', 'OR6F1', 'SNORD94', 'OC90', 'CD200R1L', 'SNORA38B', 'OR6C74', 'LMNTD1', 'OR51G2', 'GPR148', 'FAM71B', 'DPPA2', 'BRINP3', 'OR6A2', 'SLC51B', 'OR6K6', 'DYDC1', 'OR51F2', 'POU6F2', 'GDPD2', 'DKFZP434K028', 'ADGRG4', 'FFAR1', 'MAP3K15', 'KRT13', 'KRTAP2-1', 'CNBD1', 'SRY', 'NTS', 'LINC00575', 'RAX2', 'LINC00934', 'SERPINB3', 'BET1P1', 'C10ORF120', 'MOGAT3', 'SPACA3', 'IL17F', 'IL36RN', 'ARID3C', 'OR11H4', 'SLC6A5', 'CNTN5', 'TRHR', 'SNORA37', 'TSKS', 'SNORA16B', 'LOC284798', 'OR13C3', 'KCNK4', 'TCERG1L', 'GUCA2B', 'LINC00304', 'OR2A14', 'KRT25', 'KCNMB2', 'SLC2A2', 'MYH1', 'IFNA7', 'LINC00410', 'APOC3', 'TMEM179', 'HBE1', 'BMP15', 'OR2L8', 'SLC22A12', 'SNORA71A', 'KIR3DL3', 'GAGE12F', 'LINC01312', 'PRB4', 'MUSK', 'SPRR2E', 'FAM25BP', 'NLRP8', 'OR2A2', 'SPATA31C1', 'ITIH1', 'SEC14L3', 'NKAIN3', 'RPS4Y2', 'SNORA74A', 'LINC00710', 'LINC00928', 'SNORA76C', 'ZNF705A', 'DCT', 'OR2AT4', 'FAM170B', 'GPR22', 'TDRG1', 'SLC17A6', 'OR56B1', 'MAGEB3', 'PAPOLB', 'MAGEA1', 'TNP1', 'LOC100130264', 'OR11H6', 'HTR1A', 'SSX6', 'LRRC30', 'USH1C', 'CSN3', 'OR10W1', 'PROKR2', 'SPANXN3', 'USP9Y', 'CFHR2', 'SOX3', 'CTRC', 'GDNF', 'EDDM3B', 'KCNIP4-IT1', 'EPPIN', 'GKN2', 'PAGE5', 'MUC2', 'GCSAML-AS1', 'DMRTC1', 'BTN1A1', 'FAM205A', 'OR51B5', 'BCYRN1', 'DMP1', 'PPY2P', 'SCP2D1', 'ZCCHC13', 'SCARNA8', 'CHRNB3', 'LOC647859', 'HPVC1', 'SPOCK3', 'HMHB1', 'OCSTAMP', 'SPZ1', 'CRYGC', 'BPIFB3', 'ADAM29', 'ACER1', 'MAGEA12', 'PTH2', 'KRTAP4-3', 'ZFY', 'BPIFB4', 'LINC00479', 'ANKRD34C', 'GAGE2C', 'SLC32A1', 'NXPE1', 'CCKAR', 'KRTAP1-1', 'KRTAP1-5', 'TRIM48', 'ZAR1L', 'ASB15', 'FAM19A4', 'OR2T10', 'MS4A10', 'NUTM1', 'TMEM14E', 'VRTN', 'C4ORF51', 'KRT83', 'OR4F21', 'C6ORF10', 'KRT71', 'KRT3', 'C2ORF27B', 'KRTAP11-1', 'DAOA', 'KLRC4', 'HMSD', 'SOX1', 'LOC644669', 'AATK-AS1', 'ODF3', 'SPATA3', 'MMP20', 'CT47A1', 'ATOH7', 'AVP', 'AIRE', 'TPTE', 'CLEC4G', 'LINC01142', 'KCNU1', 'BTF3P11', 'FOXD4L3', 'MTVR2', 'OR2G6', 'PPP1R2P9', 'AADACL3', 'SSX9', 'RFX6', 'OR6S1', 'AFM', 'AKR1D1', 'LRRC52', 'C1ORF146', 'ZNF735', 'LOC400940', 'OACYLP', 'EPB42', 'TBR1', 'ASAP1-IT1', 'PCP4', 'B3GNT6', 'FAM170A', 'SLC22A10', 'GFI1B', 'MTNR1B', 'BTNL3', 'GNAS-AS1', 'MYH16', 'CPA2', 'LINC00303', 'IGLL1', 'HCRTR1', 'CNGA2', 'CA4', 'SH2D7', 'INSM2', 'CA6', 'CLCA1', 'HULC', 'CACNG7', 'PRR32', 'PRL', 'NF1P2', 'ZIM3', 'HYALP1', 'CT47A11', 'KRTAP3-2', 'CFHR4', 'TMEM132D', 'KCNJ16', 'USP50', 'TSPEAR-AS2', 'UGT1A4', 'PLA2G12B', 'TRIM55', 'NEUROG1', 'SSTR3', 'C11ORF87', 'SNORA72', 'DISC2', 'SERPINB11', 'NEUROD6', 'PRAMEF16', 'LINC01591', 'SNORA2B', 'PRSS48', 'GSC2', 'SNORA27', 'VWA5B1', 'OR51F1', 'OR10AD1', 'SCGB3A2', 'FERD3L', 'LINC00691', 'GABRR3', 'NKX6-2', 'RAPGEF4-AS1', 'ADRB3', 'GAGE12J', 'FAM47C', 'OR51L1', 'POM121L2', 'OR5H2', 'KRTAP12-1', 'C17ORF64', 'COX7B2', 'IFNW1', 'HIST1H3A', 'ANKRD20A20P', 'SLC10A1', 'LINC00032', 'GSTA5', 'KRTAP9-2', 'OR4D10', 'APCS', 'CGB2', 'OR5B17', 'AADAC', 'IFNL1', 'ZSCAN10', 'MMD2', 'FER1L6', 'UTS2R', 'OR51T1', 'LINC00452', 'MCF2', 'ART1', 'C12ORF56', 'OR52K2', 'MAGEA5', 'PATE3', 'CYP2C18', 'BAGE', 'PRDM9', 'GCGR', 'APOA5', 'PACRG-AS1', 'OLIG3', 'SNORD15B', 'SPINK14', 'B3GALT1', 'REG1B', 'CST9L', 'OR2A12', 'INS-IGF2', 'ISL1', 'DACH2', 'OTOP1', 'MT1B', 'GPR52', 'PDX1', 'TRIM49', 'NPSR1-AS1', 'CNTNAP5', 'OR4D5', 'FOXG1', 'NPHS2', 'EPGN', 'HAND1', 'LOC100130417', 'OR4N4', 'MYADML', 'PRSS57', 'MUC13', 'CLRN1', 'LINC00052', 'FAM138B', 'TRIM75P', 'HBM', 'PPBPP1', 'HRK', 'NHLH2', 'TAS2R42', 'NEUROG3', 'EXD1', 'OR13H1', 'IGFBP1', 'OR5K1', 'MMP21', 'PSKH2', 'OR10G8', 'ACSM2A', 'SYT10', 'CPNE6', 'COL20A1', 'MAGEA11', 'MAS1L', 'MBL2', 'PSG4', 'SSX5', 'ALAS2', 'LINC00202-2', 'ADCYAP1R1', 'SPINT3', 'HYMAI', 'CLEC4M', 'OR3A2', 'NPSR1', 'OPRM1', 'PPAN-P2RY11', 'NYAP2', 'TNP2', 'SLITRK1', 'CCER1', 'HIST2H2AB', 'VCX3A', 'PWAR4', 'SFTPB', 'PASD1', 'SHD', 'SLCO4A1-AS1', 'POU4F2', 'CALHM3', 'KRTAP10-6', 'GPHA2', 'C4ORF50', 'LHCGR', 'ADGRG7', 'OR2T2', 'PNLIPRP1', 'LINC01565', 'NBPF22P', 'TMEM202', 'TNFSF18', 'CACNG3', 'OR2K2', 'OTC', 'SCARNA14', 'RNF151', 'LOC392196', 'IFNL2', 'ARL14', 'SNORD115-26', 'H3F3AP5', 'IQCF2', 'NXNL1', 'CYP1A2', 'F2', 'SALL3', 'LOC285629', 'FOXR1', 'NMUR2', 'SNORA68', 'AWAT1', 'SDC4P', 'SNORA16A', 'SCTR', 'KCNB2', 'AMER3', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999036734615 Coefficient of Determination: 1.0 RMSE: 2.0081475025783313e-15 NRMSE: 7.276424025575518e-16 MAPE: 3.387438449828792e-11 Pearson Correlation: 0.14102161747184844 Spearman Correlation: 0.06608810583673114 Coefficient of Determination: -2.720113603738091 RMSE: 0.6427919881815687 NRMSE: 0.3315958834662048 MAPE: 543.8745263766684 Predictor: ElasticNet Pearson Correlation: 0.8188997882471297 Spearman Correlation: 0.7802861487844792 Coefficient of Determination: 0.5949154221100228 RMSE: 0.24145068308505507 NRMSE: 0.08748847129685307 MAPE: 833.1337017495467 Pearson Correlation: 0.1665111045787496 Spearman Correlation: 0.13987954962031948 Coefficient of Determination: -0.02791806426474852 RMSE: 0.3378870934182808 NRMSE: 0.17430517385698113 MAPE: 213.15774349088716 Predictor: RandomForests Pearson Correlation: 0.5580414269970942 Spearman Correlation: 0.49399928009393607 Coefficient of Determination: 0.15743229644789813 RMSE: 0.3482234290509759 NRMSE: 0.12617705234110296 MAPE: 440.4141285586185 Pearson Correlation: 0.0841400674953364 Spearman Correlation: 0.11076197957580519 Coefficient of Determination: -0.034107138490790945 RMSE: 0.3389027726021237 NRMSE: 0.17482913035064776 MAPE: 162.2873377682569 Protein: CDH3 x_train_column_count: 1003 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'DEFB109P1', 'OR8J3', 'TXLNGY', 'OR52B4', 'IFNA16', 'LINC00111', 'SNORA20', 'RAB9BP1', 'DAZL', 'OR5AN1', 'OR2T34', 'F13B', 'KRTAP19-8', 'OR11L1', 'LGALS14', 'SST', 'HBG1', 'OR2M3', 'SNORD15A', 'OTX2', 'FAM183CP', 'CLEC6A', 'OR10V1', 'NXF2B', 'TMPRSS11F', 'GPR151', 'OR8S1', 'OR2M7', 'OR5H14', 'PRM3', 'MS4A6E', 'OR8G5', 'DNAJB8', 'OR2G2', 'FGF23', 'MBD3L5', 'SCGB1C1', 'OR8B3', 'OR10A5', 'WFDC5', 'TCP10L2', 'TMEM252', 'ACOT12', 'LOC145845', 'PRSS3P2', 'PPY', 'MAGEB10', 'LINC01205', 'TAAR9', 'TSGA13', 'PLA2G2F', 'PSAPL1', 'SUN3', 'PSG7', 'CRYAA', 'USP26', 'SPRR1B', 'TTTY14', 'KRTAP10-12', 'OR1S2', 'OR2AG1', 'PRAMEF8', 'HIST1H4F', 'NPPC', 'SNORD89', 'MC2R', 'C1ORF87', 'NOX3', 'C20ORF173', 'LEUTX', 'SFTA3', 'FOXN3-AS2', 'XAGE5', 'LOC391003', 'VWC2L', 'LINC00636', 'SDR16C6P', 'FAM169B', 'LOC391343', 'ACTRT2', 'RPL13AP17', 'SLC5A7', 'ALOX12B', 'CAPZA3', 'KRTAP19-1', 'OR4S1', 'BMP10', 'OR5B2', 'TTTY15', 'OPN1MW', 'RTP2', 'SLC38A8', 'C10ORF53', 'OR4D9', 'FMR1NB', 'P2RX3', 'ARHGAP36', 'ARR3', 'CCKBR', 'SNORA70B', 'STATH', 'CASC8', 'TBC1D28', 'C11ORF94', 'KRT39', 'OR1N1', 'C1ORF94', 'SNORA34', 'TAS2R60', 'ACTR3BP2', 'SSX8', 'HNRNPCL1', 'IFITM5', 'ANKRD18DP', 'PF4', 'BEND2', 'GAGE1', 'PROKR1', 'EDDM3A', 'CABS1', 'BPIFA3', 'KHDC1L', 'LINC00029', 'MMP23A', 'DEFB129', 'OR4C16', 'AKAP14', 'CYP11B2', 'HBD', 'OR10S1', 'LINC00114', 'PRSS1', 'DEFB104A', 'HSFY2', 'CABP5', 'CYP2W1', 'CYP3A4', 'SFTPC', 'CGB5', 'CCL15-CCL14', 'DMRT1', 'RGS8', 'PROP1', 'TKTL2', 'SERPINB4', 'CLRN2', 'KCNQ1DN', 'PRAP1', 'LINC00469', 'YWHAEP7', 'SNORA51', 'KRTAP25-1', 'DUXA', 'SNORA32', 'OR4F5', 'XKR7', 'OTP', 'SNORA54', 'SLC13A1', 'LHX9', 'SVOP', 'LGI3', 'KRTAP6-1', 'PAGE2', 'LOC646813', 'MYBPHL', 'OR6Y1', 'OR4K17', 'KRTAP19-2', 'TAS2R13', 'GAGE2D', 'OR7A17', 'OR2T35', 'FBP2', 'SPACA7', 'KRTAP19-3', 'ANKUB1', 'LOC285627', 'PLET1', 'GABRG3', 'INS', 'AVPR1B', 'PRAMEF20', 'OR4K2', 'NEU2', 'MGC27382', 'FCAMR', 'TCP10', 'LCNL1', 'CRLF2', 'LINC01101', 'OTOL1', 'DNTT', 'FDCSP', 'KRT85', 'FAM71C', 'C3ORF49', 'ZFAT-AS1', 'FOXE1', 'OR6B3', 'LINC00113', 'HPD', 'C9ORF135', 'IFNA13', 'KRTAP4-5', 'OR10H2', 'IZUMO1R', 'OLIG1', 'OR1L3', 'OR8H2', 'PRDM14', 'FGF6', 'XAGE3', 'SCARNA20', 'DAW1', 'GH1', 'TCEB3C', 'CCDC166', 'TMEM207', 'UGT2A3', 'PTF1A', 'SPANXN1', 'FAM27L', 'OR14I1', 'OR8G2', 'OR1L1', 'OLAH', 'PSG11', 'DEFB108B', 'DEFA4', 'ALPPL2', 'CYLC2', 'PRKAG3', 'SNORA47', 'SPATA19', 'IL26', 'FGA', 'PRG1', 'OR51I2', 'CER1', 'LINC00923', 'BARHL2', 'KRTAP10-1', 'C17ORF78', 'SLC25A31', 'SULT1C3', 'IVL', 'NANOS2', 'LCN9', 'HBBP1', 'LCE1D', 'PYDC2', 'TFF2', 'NKX2-1', 'ZNF479', 'PISRT1', 'OR5H6', 'GYS2', 'GUCY2EP', 'FTMT', 'LINC00696', 'DEFB110', 'OPRD1', 'OR4D6', 'MYBPC2', 'EPS8L3', 'LPO', 'TARM1', 'OR7E24', 'SCGB1A1', 'UCMA', 'HOXC12', 'SCN1A', 'ENAM', 'FMO6P', 'OR1E2', 'GAGE2B', 'CPLX3', 'OR14C36', 'OR6B2', 'OR1B1', 'LOC729609', 'CLCA4', 'OR6M1', 'RESP18', 'MAGEA9B', 'ST8SIA3', 'OR1K1', 'TTTY9B', 'CYP7A1', 'GBX2', 'PRAMEF1', 'SCARNA11', 'SBSN', 'HBZ', 'HBG2', 'GPR78', 'OR4C12', 'SERPINI2', 'FRMPD2B', 'ZNF679', 'SNORA59B', 'TTTY8', 'HAO1', 'LINC00326', 'SPATA31A3', 'FAM27B', 'KRTAP21-1', 'SLC1A6', 'LINC00488', 'HTR3E', 'SLITRK3', 'OR4M2', 'MAGEB6', 'OR2M4', 'C12ORF50', 'KRTAP19-6', 'LYZL1', 'ADGRD2', 'YIPF7', 'GPRC6A', 'OR12D2', 'CCL24', 'SYCN', 'SNAR-F', 'CGB8', 'LINC00608', 'NYX', 'ANP32D', 'ASB10', 'LOC286238', 'ANGPTL3', 'TMEM88B', 'ALX4', 'ALLC', 'OR6F1', 'SNORD94', 'OC90', 'CD200R1L', 'SNORA38B', 'OR6C74', 'LMNTD1', 'OR51G2', 'GPR148', 'FAM71B', 'DPPA2', 'BRINP3', 'OR6A2', 'SLC51B', 'OR6K6', 'DYDC1', 'OR51F2', 'POU6F2', 'GDPD2', 'DKFZP434K028', 'ADGRG4', 'FFAR1', 'MAP3K15', 'KRT13', 'KRTAP2-1', 'CNBD1', 'SRY', 'NTS', 'LINC00575', 'RAX2', 'LINC00934', 'SERPINB3', 'BET1P1', 'C10ORF120', 'MOGAT3', 'SPACA3', 'IL17F', 'IL36RN', 'ARID3C', 'OR11H4', 'SLC6A5', 'CNTN5', 'TRHR', 'SNORA37', 'TSKS', 'SNORA16B', 'LOC284798', 'OR13C3', 'KCNK4', 'TCERG1L', 'GUCA2B', 'LINC00304', 'OR2A14', 'KRT25', 'KCNMB2', 'SLC2A2', 'MYH1', 'IFNA7', 'LINC00410', 'APOC3', 'TMEM179', 'HBE1', 'BMP15', 'OR2L8', 'SLC22A12', 'SNORA71A', 'KIR3DL3', 'GAGE12F', 'LINC01312', 'PRB4', 'MUSK', 'SPRR2E', 'FAM25BP', 'NLRP8', 'OR2A2', 'SPATA31C1', 'ITIH1', 'SEC14L3', 'NKAIN3', 'RPS4Y2', 'SNORA74A', 'LINC00710', 'LINC00928', 'SNORA76C', 'ZNF705A', 'DCT', 'OR2AT4', 'FAM170B', 'GPR22', 'TDRG1', 'SLC17A6', 'OR56B1', 'MAGEB3', 'PAPOLB', 'MAGEA1', 'TNP1', 'LOC100130264', 'OR11H6', 'HTR1A', 'SSX6', 'LRRC30', 'USH1C', 'CSN3', 'OR10W1', 'PROKR2', 'SPANXN3', 'USP9Y', 'CFHR2', 'SOX3', 'CTRC', 'GDNF', 'EDDM3B', 'KCNIP4-IT1', 'EPPIN', 'GKN2', 'PAGE5', 'MUC2', 'GCSAML-AS1', 'DMRTC1', 'BTN1A1', 'FAM205A', 'OR51B5', 'BCYRN1', 'DMP1', 'PPY2P', 'SCP2D1', 'ZCCHC13', 'SCARNA8', 'CHRNB3', 'LOC647859', 'HPVC1', 'SPOCK3', 'HMHB1', 'OCSTAMP', 'SPZ1', 'CRYGC', 'BPIFB3', 'ADAM29', 'ACER1', 'MAGEA12', 'PTH2', 'KRTAP4-3', 'ZFY', 'BPIFB4', 'LINC00479', 'ANKRD34C', 'GAGE2C', 'SLC32A1', 'NXPE1', 'CCKAR', 'KRTAP1-1', 'KRTAP1-5', 'TRIM48', 'ZAR1L', 'ASB15', 'FAM19A4', 'OR2T10', 'MS4A10', 'NUTM1', 'TMEM14E', 'VRTN', 'C4ORF51', 'KRT83', 'OR4F21', 'C6ORF10', 'KRT71', 'KRT3', 'C2ORF27B', 'KRTAP11-1', 'DAOA', 'KLRC4', 'HMSD', 'SOX1', 'LOC644669', 'AATK-AS1', 'ODF3', 'SPATA3', 'MMP20', 'CT47A1', 'ATOH7', 'AVP', 'AIRE', 'TPTE', 'CLEC4G', 'LINC01142', 'KCNU1', 'BTF3P11', 'FOXD4L3', 'MTVR2', 'OR2G6', 'PPP1R2P9', 'AADACL3', 'SSX9', 'RFX6', 'OR6S1', 'AFM', 'AKR1D1', 'LRRC52', 'C1ORF146', 'ZNF735', 'LOC400940', 'OACYLP', 'EPB42', 'TBR1', 'ASAP1-IT1', 'PCP4', 'B3GNT6', 'FAM170A', 'SLC22A10', 'GFI1B', 'MTNR1B', 'BTNL3', 'GNAS-AS1', 'MYH16', 'CPA2', 'LINC00303', 'IGLL1', 'HCRTR1', 'CNGA2', 'CA4', 'SH2D7', 'INSM2', 'CA6', 'CLCA1', 'HULC', 'CACNG7', 'PRR32', 'PRL', 'NF1P2', 'ZIM3', 'HYALP1', 'CT47A11', 'KRTAP3-2', 'CFHR4', 'TMEM132D', 'KCNJ16', 'USP50', 'TSPEAR-AS2', 'UGT1A4', 'PLA2G12B', 'TRIM55', 'NEUROG1', 'SSTR3', 'C11ORF87', 'SNORA72', 'DISC2', 'SERPINB11', 'NEUROD6', 'PRAMEF16', 'LINC01591', 'SNORA2B', 'PRSS48', 'GSC2', 'SNORA27', 'VWA5B1', 'OR51F1', 'OR10AD1', 'SCGB3A2', 'FERD3L', 'LINC00691', 'GABRR3', 'NKX6-2', 'RAPGEF4-AS1', 'ADRB3', 'GAGE12J', 'FAM47C', 'OR51L1', 'POM121L2', 'OR5H2', 'KRTAP12-1', 'C17ORF64', 'COX7B2', 'IFNW1', 'HIST1H3A', 'ANKRD20A20P', 'SLC10A1', 'LINC00032', 'GSTA5', 'KRTAP9-2', 'OR4D10', 'APCS', 'CGB2', 'OR5B17', 'AADAC', 'IFNL1', 'ZSCAN10', 'MMD2', 'FER1L6', 'UTS2R', 'OR51T1', 'LINC00452', 'MCF2', 'ART1', 'C12ORF56', 'OR52K2', 'MAGEA5', 'PATE3', 'CYP2C18', 'BAGE', 'PRDM9', 'GCGR', 'APOA5', 'PACRG-AS1', 'OLIG3', 'SNORD15B', 'SPINK14', 'B3GALT1', 'REG1B', 'CST9L', 'OR2A12', 'INS-IGF2', 'ISL1', 'DACH2', 'OTOP1', 'MT1B', 'GPR52', 'PDX1', 'TRIM49', 'NPSR1-AS1', 'CNTNAP5', 'OR4D5', 'FOXG1', 'NPHS2', 'EPGN', 'HAND1', 'LOC100130417', 'OR4N4', 'MYADML', 'PRSS57', 'MUC13', 'CLRN1', 'LINC00052', 'FAM138B', 'TRIM75P', 'HBM', 'PPBPP1', 'HRK', 'NHLH2', 'TAS2R42', 'NEUROG3', 'EXD1', 'OR13H1', 'IGFBP1', 'OR5K1', 'MMP21', 'PSKH2', 'OR10G8', 'ACSM2A', 'SYT10', 'CPNE6', 'COL20A1', 'MAGEA11', 'MAS1L', 'MBL2', 'PSG4', 'SSX5', 'ALAS2', 'LINC00202-2', 'ADCYAP1R1', 'SPINT3', 'HYMAI', 'CLEC4M', 'OR3A2', 'NPSR1', 'OPRM1', 'PPAN-P2RY11', 'NYAP2', 'TNP2', 'SLITRK1', 'CCER1', 'HIST2H2AB', 'VCX3A', 'PWAR4', 'SFTPB', 'PASD1', 'SHD', 'SLCO4A1-AS1', 'POU4F2', 'CALHM3', 'KRTAP10-6', 'GPHA2', 'C4ORF50', 'LHCGR', 'ADGRG7', 'OR2T2', 'PNLIPRP1', 'LINC01565', 'NBPF22P', 'TMEM202', 'TNFSF18', 'CACNG3', 'OR2K2', 'OTC', 'SCARNA14', 'RNF151', 'LOC392196', 'IFNL2', 'ARL14', 'SNORD115-26', 'H3F3AP5', 'IQCF2', 'NXNL1', 'CYP1A2', 'F2', 'SALL3', 'LOC285629', 'FOXR1', 'NMUR2', 'SNORA68', 'AWAT1', 'SDC4P', 'SNORA16A', 'SCTR', 'KCNB2', 'AMER3', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 9.988271303516955e-16 NRMSE: 7.118513693228726e-16 MAPE: 3.584175855135305e-12 Pearson Correlation: 0.04020340413320687 Spearman Correlation: 0.05846207558697739 Coefficient of Determination: -1.7826026798230887 RMSE: 0.34662763869983054 NRMSE: 0.30851383902649704 MAPE: 1059.3930734343232 Predictor: ElasticNet Pearson Correlation: 0.6992650971641992 Spearman Correlation: 0.6346090537389575 Coefficient of Determination: 0.4248939159633913 RMSE: 0.15615344836916864 NRMSE: 0.11128857303559775 MAPE: 286.02394726944095 Pearson Correlation: 0.33492264969949664 Spearman Correlation: 0.31754760034414403 Coefficient of Determination: 0.06690664565248683 RMSE: 0.2007243856209589 NRMSE: 0.17865352868697051 MAPE: 169.9711492411722 Predictor: RandomForests Pearson Correlation: 0.6195688827245404 Spearman Correlation: 0.581520191623552 Coefficient of Determination: 0.27177893651933105 RMSE: 0.1757151536318908 NRMSE: 0.12522995113238222 MAPE: 317.4176990264001 Pearson Correlation: 0.39195348845187583 Spearman Correlation: 0.3137370790159479 Coefficient of Determination: 0.07863936238677272 RMSE: 0.1994584392204566 NRMSE: 0.17752678072917438 MAPE: 243.62542436881998 Protein: PTEN x_train_column_count: 1003 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'DEFB109P1', 'OR8J3', 'TXLNGY', 'OR52B4', 'IFNA16', 'LINC00111', 'SNORA20', 'RAB9BP1', 'DAZL', 'OR5AN1', 'OR2T34', 'F13B', 'KRTAP19-8', 'OR11L1', 'LGALS14', 'SST', 'HBG1', 'OR2M3', 'SNORD15A', 'OTX2', 'FAM183CP', 'CLEC6A', 'OR10V1', 'NXF2B', 'TMPRSS11F', 'GPR151', 'OR8S1', 'OR2M7', 'OR5H14', 'PRM3', 'MS4A6E', 'OR8G5', 'DNAJB8', 'OR2G2', 'FGF23', 'MBD3L5', 'SCGB1C1', 'OR8B3', 'OR10A5', 'WFDC5', 'TCP10L2', 'TMEM252', 'ACOT12', 'LOC145845', 'PRSS3P2', 'PPY', 'MAGEB10', 'LINC01205', 'TAAR9', 'TSGA13', 'PLA2G2F', 'PSAPL1', 'SUN3', 'PSG7', 'CRYAA', 'USP26', 'SPRR1B', 'TTTY14', 'KRTAP10-12', 'OR1S2', 'OR2AG1', 'PRAMEF8', 'HIST1H4F', 'NPPC', 'SNORD89', 'MC2R', 'C1ORF87', 'NOX3', 'C20ORF173', 'LEUTX', 'SFTA3', 'FOXN3-AS2', 'XAGE5', 'LOC391003', 'VWC2L', 'LINC00636', 'SDR16C6P', 'FAM169B', 'LOC391343', 'ACTRT2', 'RPL13AP17', 'SLC5A7', 'ALOX12B', 'CAPZA3', 'KRTAP19-1', 'OR4S1', 'BMP10', 'OR5B2', 'TTTY15', 'OPN1MW', 'RTP2', 'SLC38A8', 'C10ORF53', 'OR4D9', 'FMR1NB', 'P2RX3', 'ARHGAP36', 'ARR3', 'CCKBR', 'SNORA70B', 'STATH', 'CASC8', 'TBC1D28', 'C11ORF94', 'KRT39', 'OR1N1', 'C1ORF94', 'SNORA34', 'TAS2R60', 'ACTR3BP2', 'SSX8', 'HNRNPCL1', 'IFITM5', 'ANKRD18DP', 'PF4', 'BEND2', 'GAGE1', 'PROKR1', 'EDDM3A', 'CABS1', 'BPIFA3', 'KHDC1L', 'LINC00029', 'MMP23A', 'DEFB129', 'OR4C16', 'AKAP14', 'CYP11B2', 'HBD', 'OR10S1', 'LINC00114', 'PRSS1', 'DEFB104A', 'HSFY2', 'CABP5', 'CYP2W1', 'CYP3A4', 'SFTPC', 'CGB5', 'CCL15-CCL14', 'DMRT1', 'RGS8', 'PROP1', 'TKTL2', 'SERPINB4', 'CLRN2', 'KCNQ1DN', 'PRAP1', 'LINC00469', 'YWHAEP7', 'SNORA51', 'KRTAP25-1', 'DUXA', 'SNORA32', 'OR4F5', 'XKR7', 'OTP', 'SNORA54', 'SLC13A1', 'LHX9', 'SVOP', 'LGI3', 'KRTAP6-1', 'PAGE2', 'LOC646813', 'MYBPHL', 'OR6Y1', 'OR4K17', 'KRTAP19-2', 'TAS2R13', 'GAGE2D', 'OR7A17', 'OR2T35', 'FBP2', 'SPACA7', 'KRTAP19-3', 'ANKUB1', 'LOC285627', 'PLET1', 'GABRG3', 'INS', 'AVPR1B', 'PRAMEF20', 'OR4K2', 'NEU2', 'MGC27382', 'FCAMR', 'TCP10', 'LCNL1', 'CRLF2', 'LINC01101', 'OTOL1', 'DNTT', 'FDCSP', 'KRT85', 'FAM71C', 'C3ORF49', 'ZFAT-AS1', 'FOXE1', 'OR6B3', 'LINC00113', 'HPD', 'C9ORF135', 'IFNA13', 'KRTAP4-5', 'OR10H2', 'IZUMO1R', 'OLIG1', 'OR1L3', 'OR8H2', 'PRDM14', 'FGF6', 'XAGE3', 'SCARNA20', 'DAW1', 'GH1', 'TCEB3C', 'CCDC166', 'TMEM207', 'UGT2A3', 'PTF1A', 'SPANXN1', 'FAM27L', 'OR14I1', 'OR8G2', 'OR1L1', 'OLAH', 'PSG11', 'DEFB108B', 'DEFA4', 'ALPPL2', 'CYLC2', 'PRKAG3', 'SNORA47', 'SPATA19', 'IL26', 'FGA', 'PRG1', 'OR51I2', 'CER1', 'LINC00923', 'BARHL2', 'KRTAP10-1', 'C17ORF78', 'SLC25A31', 'SULT1C3', 'IVL', 'NANOS2', 'LCN9', 'HBBP1', 'LCE1D', 'PYDC2', 'TFF2', 'NKX2-1', 'ZNF479', 'PISRT1', 'OR5H6', 'GYS2', 'GUCY2EP', 'FTMT', 'LINC00696', 'DEFB110', 'OPRD1', 'OR4D6', 'MYBPC2', 'EPS8L3', 'LPO', 'TARM1', 'OR7E24', 'SCGB1A1', 'UCMA', 'HOXC12', 'SCN1A', 'ENAM', 'FMO6P', 'OR1E2', 'GAGE2B', 'CPLX3', 'OR14C36', 'OR6B2', 'OR1B1', 'LOC729609', 'CLCA4', 'OR6M1', 'RESP18', 'MAGEA9B', 'ST8SIA3', 'OR1K1', 'TTTY9B', 'CYP7A1', 'GBX2', 'PRAMEF1', 'SCARNA11', 'SBSN', 'HBZ', 'HBG2', 'GPR78', 'OR4C12', 'SERPINI2', 'FRMPD2B', 'ZNF679', 'SNORA59B', 'TTTY8', 'HAO1', 'LINC00326', 'SPATA31A3', 'FAM27B', 'KRTAP21-1', 'SLC1A6', 'LINC00488', 'HTR3E', 'SLITRK3', 'OR4M2', 'MAGEB6', 'OR2M4', 'C12ORF50', 'KRTAP19-6', 'LYZL1', 'ADGRD2', 'YIPF7', 'GPRC6A', 'OR12D2', 'CCL24', 'SYCN', 'SNAR-F', 'CGB8', 'LINC00608', 'NYX', 'ANP32D', 'ASB10', 'LOC286238', 'ANGPTL3', 'TMEM88B', 'ALX4', 'ALLC', 'OR6F1', 'SNORD94', 'OC90', 'CD200R1L', 'SNORA38B', 'OR6C74', 'LMNTD1', 'OR51G2', 'GPR148', 'FAM71B', 'DPPA2', 'BRINP3', 'OR6A2', 'SLC51B', 'OR6K6', 'DYDC1', 'OR51F2', 'POU6F2', 'GDPD2', 'DKFZP434K028', 'ADGRG4', 'FFAR1', 'MAP3K15', 'KRT13', 'KRTAP2-1', 'CNBD1', 'SRY', 'NTS', 'LINC00575', 'RAX2', 'LINC00934', 'SERPINB3', 'BET1P1', 'C10ORF120', 'MOGAT3', 'SPACA3', 'IL17F', 'IL36RN', 'ARID3C', 'OR11H4', 'SLC6A5', 'CNTN5', 'TRHR', 'SNORA37', 'TSKS', 'SNORA16B', 'LOC284798', 'OR13C3', 'KCNK4', 'TCERG1L', 'GUCA2B', 'LINC00304', 'OR2A14', 'KRT25', 'KCNMB2', 'SLC2A2', 'MYH1', 'IFNA7', 'LINC00410', 'APOC3', 'TMEM179', 'HBE1', 'BMP15', 'OR2L8', 'SLC22A12', 'SNORA71A', 'KIR3DL3', 'GAGE12F', 'LINC01312', 'PRB4', 'MUSK', 'SPRR2E', 'FAM25BP', 'NLRP8', 'OR2A2', 'SPATA31C1', 'ITIH1', 'SEC14L3', 'NKAIN3', 'RPS4Y2', 'SNORA74A', 'LINC00710', 'LINC00928', 'SNORA76C', 'ZNF705A', 'DCT', 'OR2AT4', 'FAM170B', 'GPR22', 'TDRG1', 'SLC17A6', 'OR56B1', 'MAGEB3', 'PAPOLB', 'MAGEA1', 'TNP1', 'LOC100130264', 'OR11H6', 'HTR1A', 'SSX6', 'LRRC30', 'USH1C', 'CSN3', 'OR10W1', 'PROKR2', 'SPANXN3', 'USP9Y', 'CFHR2', 'SOX3', 'CTRC', 'GDNF', 'EDDM3B', 'KCNIP4-IT1', 'EPPIN', 'GKN2', 'PAGE5', 'MUC2', 'GCSAML-AS1', 'DMRTC1', 'BTN1A1', 'FAM205A', 'OR51B5', 'BCYRN1', 'DMP1', 'PPY2P', 'SCP2D1', 'ZCCHC13', 'SCARNA8', 'CHRNB3', 'LOC647859', 'HPVC1', 'SPOCK3', 'HMHB1', 'OCSTAMP', 'SPZ1', 'CRYGC', 'BPIFB3', 'ADAM29', 'ACER1', 'MAGEA12', 'PTH2', 'KRTAP4-3', 'ZFY', 'BPIFB4', 'LINC00479', 'ANKRD34C', 'GAGE2C', 'SLC32A1', 'NXPE1', 'CCKAR', 'KRTAP1-1', 'KRTAP1-5', 'TRIM48', 'ZAR1L', 'ASB15', 'FAM19A4', 'OR2T10', 'MS4A10', 'NUTM1', 'TMEM14E', 'VRTN', 'C4ORF51', 'KRT83', 'OR4F21', 'C6ORF10', 'KRT71', 'KRT3', 'C2ORF27B', 'KRTAP11-1', 'DAOA', 'KLRC4', 'HMSD', 'SOX1', 'LOC644669', 'AATK-AS1', 'ODF3', 'SPATA3', 'MMP20', 'CT47A1', 'ATOH7', 'AVP', 'AIRE', 'TPTE', 'CLEC4G', 'LINC01142', 'KCNU1', 'BTF3P11', 'FOXD4L3', 'MTVR2', 'OR2G6', 'PPP1R2P9', 'AADACL3', 'SSX9', 'RFX6', 'OR6S1', 'AFM', 'AKR1D1', 'LRRC52', 'C1ORF146', 'ZNF735', 'LOC400940', 'OACYLP', 'EPB42', 'TBR1', 'ASAP1-IT1', 'PCP4', 'B3GNT6', 'FAM170A', 'SLC22A10', 'GFI1B', 'MTNR1B', 'BTNL3', 'GNAS-AS1', 'MYH16', 'CPA2', 'LINC00303', 'IGLL1', 'HCRTR1', 'CNGA2', 'CA4', 'SH2D7', 'INSM2', 'CA6', 'CLCA1', 'HULC', 'CACNG7', 'PRR32', 'PRL', 'NF1P2', 'ZIM3', 'HYALP1', 'CT47A11', 'KRTAP3-2', 'CFHR4', 'TMEM132D', 'KCNJ16', 'USP50', 'TSPEAR-AS2', 'UGT1A4', 'PLA2G12B', 'TRIM55', 'NEUROG1', 'SSTR3', 'C11ORF87', 'SNORA72', 'DISC2', 'SERPINB11', 'NEUROD6', 'PRAMEF16', 'LINC01591', 'SNORA2B', 'PRSS48', 'GSC2', 'SNORA27', 'VWA5B1', 'OR51F1', 'OR10AD1', 'SCGB3A2', 'FERD3L', 'LINC00691', 'GABRR3', 'NKX6-2', 'RAPGEF4-AS1', 'ADRB3', 'GAGE12J', 'FAM47C', 'OR51L1', 'POM121L2', 'OR5H2', 'KRTAP12-1', 'C17ORF64', 'COX7B2', 'IFNW1', 'HIST1H3A', 'ANKRD20A20P', 'SLC10A1', 'LINC00032', 'GSTA5', 'KRTAP9-2', 'OR4D10', 'APCS', 'CGB2', 'OR5B17', 'AADAC', 'IFNL1', 'ZSCAN10', 'MMD2', 'FER1L6', 'UTS2R', 'OR51T1', 'LINC00452', 'MCF2', 'ART1', 'C12ORF56', 'OR52K2', 'MAGEA5', 'PATE3', 'CYP2C18', 'BAGE', 'PRDM9', 'GCGR', 'APOA5', 'PACRG-AS1', 'OLIG3', 'SNORD15B', 'SPINK14', 'B3GALT1', 'REG1B', 'CST9L', 'OR2A12', 'INS-IGF2', 'ISL1', 'DACH2', 'OTOP1', 'MT1B', 'GPR52', 'PDX1', 'TRIM49', 'NPSR1-AS1', 'CNTNAP5', 'OR4D5', 'FOXG1', 'NPHS2', 'EPGN', 'HAND1', 'LOC100130417', 'OR4N4', 'MYADML', 'PRSS57', 'MUC13', 'CLRN1', 'LINC00052', 'FAM138B', 'TRIM75P', 'HBM', 'PPBPP1', 'HRK', 'NHLH2', 'TAS2R42', 'NEUROG3', 'EXD1', 'OR13H1', 'IGFBP1', 'OR5K1', 'MMP21', 'PSKH2', 'OR10G8', 'ACSM2A', 'SYT10', 'CPNE6', 'COL20A1', 'MAGEA11', 'MAS1L', 'MBL2', 'PSG4', 'SSX5', 'ALAS2', 'LINC00202-2', 'ADCYAP1R1', 'SPINT3', 'HYMAI', 'CLEC4M', 'OR3A2', 'NPSR1', 'OPRM1', 'PPAN-P2RY11', 'NYAP2', 'TNP2', 'SLITRK1', 'CCER1', 'HIST2H2AB', 'VCX3A', 'PWAR4', 'SFTPB', 'PASD1', 'SHD', 'SLCO4A1-AS1', 'POU4F2', 'CALHM3', 'KRTAP10-6', 'GPHA2', 'C4ORF50', 'LHCGR', 'ADGRG7', 'OR2T2', 'PNLIPRP1', 'LINC01565', 'NBPF22P', 'TMEM202', 'TNFSF18', 'CACNG3', 'OR2K2', 'OTC', 'SCARNA14', 'RNF151', 'LOC392196', 'IFNL2', 'ARL14', 'SNORD115-26', 'H3F3AP5', 'IQCF2', 'NXNL1', 'CYP1A2', 'F2', 'SALL3', 'LOC285629', 'FOXR1', 'NMUR2', 'SNORA68', 'AWAT1', 'SDC4P', 'SNORA16A', 'SCTR', 'KCNB2', 'AMER3', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.571641890671255e-15 NRMSE: 4.974547142276491e-16 MAPE: 4.322512161311624e-12 Pearson Correlation: 0.2624076897106529 Spearman Correlation: 0.21162109253232586 Coefficient of Determination: -0.8508814495880266 RMSE: 1.014328259475328 NRMSE: 0.15860030638344585 MAPE: 2285.2003802179015 Predictor: ElasticNet Pearson Correlation: 0.8588943516487083 Spearman Correlation: 0.8245810595294508 Coefficient of Determination: 0.6927906188390245 RMSE: 0.31137555080435586 NRMSE: 0.060232039384934204 MAPE: 281.97980314875224 Pearson Correlation: 0.2894175655087031 Spearman Correlation: 0.28261948403346676 Coefficient of Determination: 0.06777122385165446 RMSE: 0.7198640346427868 NRMSE: 0.11255789768474503 MAPE: 258.46059443393375 Predictor: RandomForests Pearson Correlation: 0.5724535668307712 Spearman Correlation: 0.5534122863475112 Coefficient of Determination: 0.2620860384164446 RMSE: 0.4825809074686856 NRMSE: 0.09334975771214128 MAPE: 200.49676515686903 Pearson Correlation: 0.4168126940499359 Spearman Correlation: 0.4629415116669788 Coefficient of Determination: 0.13438948625067926 RMSE: 0.693666123192663 NRMSE: 0.10846159380699913 MAPE: 248.7790774990548 Protein: BRCA2 x_train_column_count: 1003 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'DEFB109P1', 'OR8J3', 'TXLNGY', 'OR52B4', 'IFNA16', 'LINC00111', 'SNORA20', 'RAB9BP1', 'DAZL', 'OR5AN1', 'OR2T34', 'F13B', 'KRTAP19-8', 'OR11L1', 'LGALS14', 'SST', 'HBG1', 'OR2M3', 'SNORD15A', 'OTX2', 'FAM183CP', 'CLEC6A', 'OR10V1', 'NXF2B', 'TMPRSS11F', 'GPR151', 'OR8S1', 'OR2M7', 'OR5H14', 'PRM3', 'MS4A6E', 'OR8G5', 'DNAJB8', 'OR2G2', 'FGF23', 'MBD3L5', 'SCGB1C1', 'OR8B3', 'OR10A5', 'WFDC5', 'TCP10L2', 'TMEM252', 'ACOT12', 'LOC145845', 'PRSS3P2', 'PPY', 'MAGEB10', 'LINC01205', 'TAAR9', 'TSGA13', 'PLA2G2F', 'PSAPL1', 'SUN3', 'PSG7', 'CRYAA', 'USP26', 'SPRR1B', 'TTTY14', 'KRTAP10-12', 'OR1S2', 'OR2AG1', 'PRAMEF8', 'HIST1H4F', 'NPPC', 'SNORD89', 'MC2R', 'C1ORF87', 'NOX3', 'C20ORF173', 'LEUTX', 'SFTA3', 'FOXN3-AS2', 'XAGE5', 'LOC391003', 'VWC2L', 'LINC00636', 'SDR16C6P', 'FAM169B', 'LOC391343', 'ACTRT2', 'RPL13AP17', 'SLC5A7', 'ALOX12B', 'CAPZA3', 'KRTAP19-1', 'OR4S1', 'BMP10', 'OR5B2', 'TTTY15', 'OPN1MW', 'RTP2', 'SLC38A8', 'C10ORF53', 'OR4D9', 'FMR1NB', 'P2RX3', 'ARHGAP36', 'ARR3', 'CCKBR', 'SNORA70B', 'STATH', 'CASC8', 'TBC1D28', 'C11ORF94', 'KRT39', 'OR1N1', 'C1ORF94', 'SNORA34', 'TAS2R60', 'ACTR3BP2', 'SSX8', 'HNRNPCL1', 'IFITM5', 'ANKRD18DP', 'PF4', 'BEND2', 'GAGE1', 'PROKR1', 'EDDM3A', 'CABS1', 'BPIFA3', 'KHDC1L', 'LINC00029', 'MMP23A', 'DEFB129', 'OR4C16', 'AKAP14', 'CYP11B2', 'HBD', 'OR10S1', 'LINC00114', 'PRSS1', 'DEFB104A', 'HSFY2', 'CABP5', 'CYP2W1', 'CYP3A4', 'SFTPC', 'CGB5', 'CCL15-CCL14', 'DMRT1', 'RGS8', 'PROP1', 'TKTL2', 'SERPINB4', 'CLRN2', 'KCNQ1DN', 'PRAP1', 'LINC00469', 'YWHAEP7', 'SNORA51', 'KRTAP25-1', 'DUXA', 'SNORA32', 'OR4F5', 'XKR7', 'OTP', 'SNORA54', 'SLC13A1', 'LHX9', 'SVOP', 'LGI3', 'KRTAP6-1', 'PAGE2', 'LOC646813', 'MYBPHL', 'OR6Y1', 'OR4K17', 'KRTAP19-2', 'TAS2R13', 'GAGE2D', 'OR7A17', 'OR2T35', 'FBP2', 'SPACA7', 'KRTAP19-3', 'ANKUB1', 'LOC285627', 'PLET1', 'GABRG3', 'INS', 'AVPR1B', 'PRAMEF20', 'OR4K2', 'NEU2', 'MGC27382', 'FCAMR', 'TCP10', 'LCNL1', 'CRLF2', 'LINC01101', 'OTOL1', 'DNTT', 'FDCSP', 'KRT85', 'FAM71C', 'C3ORF49', 'ZFAT-AS1', 'FOXE1', 'OR6B3', 'LINC00113', 'HPD', 'C9ORF135', 'IFNA13', 'KRTAP4-5', 'OR10H2', 'IZUMO1R', 'OLIG1', 'OR1L3', 'OR8H2', 'PRDM14', 'FGF6', 'XAGE3', 'SCARNA20', 'DAW1', 'GH1', 'TCEB3C', 'CCDC166', 'TMEM207', 'UGT2A3', 'PTF1A', 'SPANXN1', 'FAM27L', 'OR14I1', 'OR8G2', 'OR1L1', 'OLAH', 'PSG11', 'DEFB108B', 'DEFA4', 'ALPPL2', 'CYLC2', 'PRKAG3', 'SNORA47', 'SPATA19', 'IL26', 'FGA', 'PRG1', 'OR51I2', 'CER1', 'LINC00923', 'BARHL2', 'KRTAP10-1', 'C17ORF78', 'SLC25A31', 'SULT1C3', 'IVL', 'NANOS2', 'LCN9', 'HBBP1', 'LCE1D', 'PYDC2', 'TFF2', 'NKX2-1', 'ZNF479', 'PISRT1', 'OR5H6', 'GYS2', 'GUCY2EP', 'FTMT', 'LINC00696', 'DEFB110', 'OPRD1', 'OR4D6', 'MYBPC2', 'EPS8L3', 'LPO', 'TARM1', 'OR7E24', 'SCGB1A1', 'UCMA', 'HOXC12', 'SCN1A', 'ENAM', 'FMO6P', 'OR1E2', 'GAGE2B', 'CPLX3', 'OR14C36', 'OR6B2', 'OR1B1', 'LOC729609', 'CLCA4', 'OR6M1', 'RESP18', 'MAGEA9B', 'ST8SIA3', 'OR1K1', 'TTTY9B', 'CYP7A1', 'GBX2', 'PRAMEF1', 'SCARNA11', 'SBSN', 'HBZ', 'HBG2', 'GPR78', 'OR4C12', 'SERPINI2', 'FRMPD2B', 'ZNF679', 'SNORA59B', 'TTTY8', 'HAO1', 'LINC00326', 'SPATA31A3', 'FAM27B', 'KRTAP21-1', 'SLC1A6', 'LINC00488', 'HTR3E', 'SLITRK3', 'OR4M2', 'MAGEB6', 'OR2M4', 'C12ORF50', 'KRTAP19-6', 'LYZL1', 'ADGRD2', 'YIPF7', 'GPRC6A', 'OR12D2', 'CCL24', 'SYCN', 'SNAR-F', 'CGB8', 'LINC00608', 'NYX', 'ANP32D', 'ASB10', 'LOC286238', 'ANGPTL3', 'TMEM88B', 'ALX4', 'ALLC', 'OR6F1', 'SNORD94', 'OC90', 'CD200R1L', 'SNORA38B', 'OR6C74', 'LMNTD1', 'OR51G2', 'GPR148', 'FAM71B', 'DPPA2', 'BRINP3', 'OR6A2', 'SLC51B', 'OR6K6', 'DYDC1', 'OR51F2', 'POU6F2', 'GDPD2', 'DKFZP434K028', 'ADGRG4', 'FFAR1', 'MAP3K15', 'KRT13', 'KRTAP2-1', 'CNBD1', 'SRY', 'NTS', 'LINC00575', 'RAX2', 'LINC00934', 'SERPINB3', 'BET1P1', 'C10ORF120', 'MOGAT3', 'SPACA3', 'IL17F', 'IL36RN', 'ARID3C', 'OR11H4', 'SLC6A5', 'CNTN5', 'TRHR', 'SNORA37', 'TSKS', 'SNORA16B', 'LOC284798', 'OR13C3', 'KCNK4', 'TCERG1L', 'GUCA2B', 'LINC00304', 'OR2A14', 'KRT25', 'KCNMB2', 'SLC2A2', 'MYH1', 'IFNA7', 'LINC00410', 'APOC3', 'TMEM179', 'HBE1', 'BMP15', 'OR2L8', 'SLC22A12', 'SNORA71A', 'KIR3DL3', 'GAGE12F', 'LINC01312', 'PRB4', 'MUSK', 'SPRR2E', 'FAM25BP', 'NLRP8', 'OR2A2', 'SPATA31C1', 'ITIH1', 'SEC14L3', 'NKAIN3', 'RPS4Y2', 'SNORA74A', 'LINC00710', 'LINC00928', 'SNORA76C', 'ZNF705A', 'DCT', 'OR2AT4', 'FAM170B', 'GPR22', 'TDRG1', 'SLC17A6', 'OR56B1', 'MAGEB3', 'PAPOLB', 'MAGEA1', 'TNP1', 'LOC100130264', 'OR11H6', 'HTR1A', 'SSX6', 'LRRC30', 'USH1C', 'CSN3', 'OR10W1', 'PROKR2', 'SPANXN3', 'USP9Y', 'CFHR2', 'SOX3', 'CTRC', 'GDNF', 'EDDM3B', 'KCNIP4-IT1', 'EPPIN', 'GKN2', 'PAGE5', 'MUC2', 'GCSAML-AS1', 'DMRTC1', 'BTN1A1', 'FAM205A', 'OR51B5', 'BCYRN1', 'DMP1', 'PPY2P', 'SCP2D1', 'ZCCHC13', 'SCARNA8', 'CHRNB3', 'LOC647859', 'HPVC1', 'SPOCK3', 'HMHB1', 'OCSTAMP', 'SPZ1', 'CRYGC', 'BPIFB3', 'ADAM29', 'ACER1', 'MAGEA12', 'PTH2', 'KRTAP4-3', 'ZFY', 'BPIFB4', 'LINC00479', 'ANKRD34C', 'GAGE2C', 'SLC32A1', 'NXPE1', 'CCKAR', 'KRTAP1-1', 'KRTAP1-5', 'TRIM48', 'ZAR1L', 'ASB15', 'FAM19A4', 'OR2T10', 'MS4A10', 'NUTM1', 'TMEM14E', 'VRTN', 'C4ORF51', 'KRT83', 'OR4F21', 'C6ORF10', 'KRT71', 'KRT3', 'C2ORF27B', 'KRTAP11-1', 'DAOA', 'KLRC4', 'HMSD', 'SOX1', 'LOC644669', 'AATK-AS1', 'ODF3', 'SPATA3', 'MMP20', 'CT47A1', 'ATOH7', 'AVP', 'AIRE', 'TPTE', 'CLEC4G', 'LINC01142', 'KCNU1', 'BTF3P11', 'FOXD4L3', 'MTVR2', 'OR2G6', 'PPP1R2P9', 'AADACL3', 'SSX9', 'RFX6', 'OR6S1', 'AFM', 'AKR1D1', 'LRRC52', 'C1ORF146', 'ZNF735', 'LOC400940', 'OACYLP', 'EPB42', 'TBR1', 'ASAP1-IT1', 'PCP4', 'B3GNT6', 'FAM170A', 'SLC22A10', 'GFI1B', 'MTNR1B', 'BTNL3', 'GNAS-AS1', 'MYH16', 'CPA2', 'LINC00303', 'IGLL1', 'HCRTR1', 'CNGA2', 'CA4', 'SH2D7', 'INSM2', 'CA6', 'CLCA1', 'HULC', 'CACNG7', 'PRR32', 'PRL', 'NF1P2', 'ZIM3', 'HYALP1', 'CT47A11', 'KRTAP3-2', 'CFHR4', 'TMEM132D', 'KCNJ16', 'USP50', 'TSPEAR-AS2', 'UGT1A4', 'PLA2G12B', 'TRIM55', 'NEUROG1', 'SSTR3', 'C11ORF87', 'SNORA72', 'DISC2', 'SERPINB11', 'NEUROD6', 'PRAMEF16', 'LINC01591', 'SNORA2B', 'PRSS48', 'GSC2', 'SNORA27', 'VWA5B1', 'OR51F1', 'OR10AD1', 'SCGB3A2', 'FERD3L', 'LINC00691', 'GABRR3', 'NKX6-2', 'RAPGEF4-AS1', 'ADRB3', 'GAGE12J', 'FAM47C', 'OR51L1', 'POM121L2', 'OR5H2', 'KRTAP12-1', 'C17ORF64', 'COX7B2', 'IFNW1', 'HIST1H3A', 'ANKRD20A20P', 'SLC10A1', 'LINC00032', 'GSTA5', 'KRTAP9-2', 'OR4D10', 'APCS', 'CGB2', 'OR5B17', 'AADAC', 'IFNL1', 'ZSCAN10', 'MMD2', 'FER1L6', 'UTS2R', 'OR51T1', 'LINC00452', 'MCF2', 'ART1', 'C12ORF56', 'OR52K2', 'MAGEA5', 'PATE3', 'CYP2C18', 'BAGE', 'PRDM9', 'GCGR', 'APOA5', 'PACRG-AS1', 'OLIG3', 'SNORD15B', 'SPINK14', 'B3GALT1', 'REG1B', 'CST9L', 'OR2A12', 'INS-IGF2', 'ISL1', 'DACH2', 'OTOP1', 'MT1B', 'GPR52', 'PDX1', 'TRIM49', 'NPSR1-AS1', 'CNTNAP5', 'OR4D5', 'FOXG1', 'NPHS2', 'EPGN', 'HAND1', 'LOC100130417', 'OR4N4', 'MYADML', 'PRSS57', 'MUC13', 'CLRN1', 'LINC00052', 'FAM138B', 'TRIM75P', 'HBM', 'PPBPP1', 'HRK', 'NHLH2', 'TAS2R42', 'NEUROG3', 'EXD1', 'OR13H1', 'IGFBP1', 'OR5K1', 'MMP21', 'PSKH2', 'OR10G8', 'ACSM2A', 'SYT10', 'CPNE6', 'COL20A1', 'MAGEA11', 'MAS1L', 'MBL2', 'PSG4', 'SSX5', 'ALAS2', 'LINC00202-2', 'ADCYAP1R1', 'SPINT3', 'HYMAI', 'CLEC4M', 'OR3A2', 'NPSR1', 'OPRM1', 'PPAN-P2RY11', 'NYAP2', 'TNP2', 'SLITRK1', 'CCER1', 'HIST2H2AB', 'VCX3A', 'PWAR4', 'SFTPB', 'PASD1', 'SHD', 'SLCO4A1-AS1', 'POU4F2', 'CALHM3', 'KRTAP10-6', 'GPHA2', 'C4ORF50', 'LHCGR', 'ADGRG7', 'OR2T2', 'PNLIPRP1', 'LINC01565', 'NBPF22P', 'TMEM202', 'TNFSF18', 'CACNG3', 'OR2K2', 'OTC', 'SCARNA14', 'RNF151', 'LOC392196', 'IFNL2', 'ARL14', 'SNORD115-26', 'H3F3AP5', 'IQCF2', 'NXNL1', 'CYP1A2', 'F2', 'SALL3', 'LOC285629', 'FOXR1', 'NMUR2', 'SNORA68', 'AWAT1', 'SDC4P', 'SNORA16A', 'SCTR', 'KCNB2', 'AMER3', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999229387699 Coefficient of Determination: 1.0 RMSE: 8.914137176333873e-16 NRMSE: 5.742720036291753e-16 MAPE: 1.964839920707809e-12 Pearson Correlation: -0.07817817404810797 Spearman Correlation: -0.044616516415416654 Coefficient of Determination: -2.2142932223561775 RMSE: 0.3731042886779822 NRMSE: 0.3624799998814567 MAPE: 950.9051967748807 Predictor: ElasticNet Pearson Correlation: 0.6614730012831409 Spearman Correlation: 0.5603665525428354 Coefficient of Determination: 0.3437590320691828 RMSE: 0.1553724753501331 NRMSE: 0.10009500747310879 MAPE: 109.12817238791695 Pearson Correlation: 0.1325404261961408 Spearman Correlation: 0.12028329530293395 Coefficient of Determination: 0.016658483393579337 RMSE: 0.20636672998637745 NRMSE: 0.20049035760497563 MAPE: 219.84859365345847 Predictor: RandomForests Pearson Correlation: 0.5671834550967974 Spearman Correlation: 0.5180555817242674 Coefficient of Determination: 0.15211993979166694 RMSE: 0.1766076965944382 NRMSE: 0.11377529173421692 MAPE: 111.7924668109737 Pearson Correlation: 0.13258161342263752 Spearman Correlation: 0.17192982456140352 Coefficient of Determination: 0.010721134983655345 RMSE: 0.20698880644323175 NRMSE: 0.20109472019433577 MAPE: 197.25074218910586 Protein: CDKN2A x_train_column_count: 1003 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'DEFB109P1', 'OR8J3', 'TXLNGY', 'OR52B4', 'IFNA16', 'LINC00111', 'SNORA20', 'RAB9BP1', 'DAZL', 'OR5AN1', 'OR2T34', 'F13B', 'KRTAP19-8', 'OR11L1', 'LGALS14', 'SST', 'HBG1', 'OR2M3', 'SNORD15A', 'OTX2', 'FAM183CP', 'CLEC6A', 'OR10V1', 'NXF2B', 'TMPRSS11F', 'GPR151', 'OR8S1', 'OR2M7', 'OR5H14', 'PRM3', 'MS4A6E', 'OR8G5', 'DNAJB8', 'OR2G2', 'FGF23', 'MBD3L5', 'SCGB1C1', 'OR8B3', 'OR10A5', 'WFDC5', 'TCP10L2', 'TMEM252', 'ACOT12', 'LOC145845', 'PRSS3P2', 'PPY', 'MAGEB10', 'LINC01205', 'TAAR9', 'TSGA13', 'PLA2G2F', 'PSAPL1', 'SUN3', 'PSG7', 'CRYAA', 'USP26', 'SPRR1B', 'TTTY14', 'KRTAP10-12', 'OR1S2', 'OR2AG1', 'PRAMEF8', 'HIST1H4F', 'NPPC', 'SNORD89', 'MC2R', 'C1ORF87', 'NOX3', 'C20ORF173', 'LEUTX', 'SFTA3', 'FOXN3-AS2', 'XAGE5', 'LOC391003', 'VWC2L', 'LINC00636', 'SDR16C6P', 'FAM169B', 'LOC391343', 'ACTRT2', 'RPL13AP17', 'SLC5A7', 'ALOX12B', 'CAPZA3', 'KRTAP19-1', 'OR4S1', 'BMP10', 'OR5B2', 'TTTY15', 'OPN1MW', 'RTP2', 'SLC38A8', 'C10ORF53', 'OR4D9', 'FMR1NB', 'P2RX3', 'ARHGAP36', 'ARR3', 'CCKBR', 'SNORA70B', 'STATH', 'CASC8', 'TBC1D28', 'C11ORF94', 'KRT39', 'OR1N1', 'C1ORF94', 'SNORA34', 'TAS2R60', 'ACTR3BP2', 'SSX8', 'HNRNPCL1', 'IFITM5', 'ANKRD18DP', 'PF4', 'BEND2', 'GAGE1', 'PROKR1', 'EDDM3A', 'CABS1', 'BPIFA3', 'KHDC1L', 'LINC00029', 'MMP23A', 'DEFB129', 'OR4C16', 'AKAP14', 'CYP11B2', 'HBD', 'OR10S1', 'LINC00114', 'PRSS1', 'DEFB104A', 'HSFY2', 'CABP5', 'CYP2W1', 'CYP3A4', 'SFTPC', 'CGB5', 'CCL15-CCL14', 'DMRT1', 'RGS8', 'PROP1', 'TKTL2', 'SERPINB4', 'CLRN2', 'KCNQ1DN', 'PRAP1', 'LINC00469', 'YWHAEP7', 'SNORA51', 'KRTAP25-1', 'DUXA', 'SNORA32', 'OR4F5', 'XKR7', 'OTP', 'SNORA54', 'SLC13A1', 'LHX9', 'SVOP', 'LGI3', 'KRTAP6-1', 'PAGE2', 'LOC646813', 'MYBPHL', 'OR6Y1', 'OR4K17', 'KRTAP19-2', 'TAS2R13', 'GAGE2D', 'OR7A17', 'OR2T35', 'FBP2', 'SPACA7', 'KRTAP19-3', 'ANKUB1', 'LOC285627', 'PLET1', 'GABRG3', 'INS', 'AVPR1B', 'PRAMEF20', 'OR4K2', 'NEU2', 'MGC27382', 'FCAMR', 'TCP10', 'LCNL1', 'CRLF2', 'LINC01101', 'OTOL1', 'DNTT', 'FDCSP', 'KRT85', 'FAM71C', 'C3ORF49', 'ZFAT-AS1', 'FOXE1', 'OR6B3', 'LINC00113', 'HPD', 'C9ORF135', 'IFNA13', 'KRTAP4-5', 'OR10H2', 'IZUMO1R', 'OLIG1', 'OR1L3', 'OR8H2', 'PRDM14', 'FGF6', 'XAGE3', 'SCARNA20', 'DAW1', 'GH1', 'TCEB3C', 'CCDC166', 'TMEM207', 'UGT2A3', 'PTF1A', 'SPANXN1', 'FAM27L', 'OR14I1', 'OR8G2', 'OR1L1', 'OLAH', 'PSG11', 'DEFB108B', 'DEFA4', 'ALPPL2', 'CYLC2', 'PRKAG3', 'SNORA47', 'SPATA19', 'IL26', 'FGA', 'PRG1', 'OR51I2', 'CER1', 'LINC00923', 'BARHL2', 'KRTAP10-1', 'C17ORF78', 'SLC25A31', 'SULT1C3', 'IVL', 'NANOS2', 'LCN9', 'HBBP1', 'LCE1D', 'PYDC2', 'TFF2', 'NKX2-1', 'ZNF479', 'PISRT1', 'OR5H6', 'GYS2', 'GUCY2EP', 'FTMT', 'LINC00696', 'DEFB110', 'OPRD1', 'OR4D6', 'MYBPC2', 'EPS8L3', 'LPO', 'TARM1', 'OR7E24', 'SCGB1A1', 'UCMA', 'HOXC12', 'SCN1A', 'ENAM', 'FMO6P', 'OR1E2', 'GAGE2B', 'CPLX3', 'OR14C36', 'OR6B2', 'OR1B1', 'LOC729609', 'CLCA4', 'OR6M1', 'RESP18', 'MAGEA9B', 'ST8SIA3', 'OR1K1', 'TTTY9B', 'CYP7A1', 'GBX2', 'PRAMEF1', 'SCARNA11', 'SBSN', 'HBZ', 'HBG2', 'GPR78', 'OR4C12', 'SERPINI2', 'FRMPD2B', 'ZNF679', 'SNORA59B', 'TTTY8', 'HAO1', 'LINC00326', 'SPATA31A3', 'FAM27B', 'KRTAP21-1', 'SLC1A6', 'LINC00488', 'HTR3E', 'SLITRK3', 'OR4M2', 'MAGEB6', 'OR2M4', 'C12ORF50', 'KRTAP19-6', 'LYZL1', 'ADGRD2', 'YIPF7', 'GPRC6A', 'OR12D2', 'CCL24', 'SYCN', 'SNAR-F', 'CGB8', 'LINC00608', 'NYX', 'ANP32D', 'ASB10', 'LOC286238', 'ANGPTL3', 'TMEM88B', 'ALX4', 'ALLC', 'OR6F1', 'SNORD94', 'OC90', 'CD200R1L', 'SNORA38B', 'OR6C74', 'LMNTD1', 'OR51G2', 'GPR148', 'FAM71B', 'DPPA2', 'BRINP3', 'OR6A2', 'SLC51B', 'OR6K6', 'DYDC1', 'OR51F2', 'POU6F2', 'GDPD2', 'DKFZP434K028', 'ADGRG4', 'FFAR1', 'MAP3K15', 'KRT13', 'KRTAP2-1', 'CNBD1', 'SRY', 'NTS', 'LINC00575', 'RAX2', 'LINC00934', 'SERPINB3', 'BET1P1', 'C10ORF120', 'MOGAT3', 'SPACA3', 'IL17F', 'IL36RN', 'ARID3C', 'OR11H4', 'SLC6A5', 'CNTN5', 'TRHR', 'SNORA37', 'TSKS', 'SNORA16B', 'LOC284798', 'OR13C3', 'KCNK4', 'TCERG1L', 'GUCA2B', 'LINC00304', 'OR2A14', 'KRT25', 'KCNMB2', 'SLC2A2', 'MYH1', 'IFNA7', 'LINC00410', 'APOC3', 'TMEM179', 'HBE1', 'BMP15', 'OR2L8', 'SLC22A12', 'SNORA71A', 'KIR3DL3', 'GAGE12F', 'LINC01312', 'PRB4', 'MUSK', 'SPRR2E', 'FAM25BP', 'NLRP8', 'OR2A2', 'SPATA31C1', 'ITIH1', 'SEC14L3', 'NKAIN3', 'RPS4Y2', 'SNORA74A', 'LINC00710', 'LINC00928', 'SNORA76C', 'ZNF705A', 'DCT', 'OR2AT4', 'FAM170B', 'GPR22', 'TDRG1', 'SLC17A6', 'OR56B1', 'MAGEB3', 'PAPOLB', 'MAGEA1', 'TNP1', 'LOC100130264', 'OR11H6', 'HTR1A', 'SSX6', 'LRRC30', 'USH1C', 'CSN3', 'OR10W1', 'PROKR2', 'SPANXN3', 'USP9Y', 'CFHR2', 'SOX3', 'CTRC', 'GDNF', 'EDDM3B', 'KCNIP4-IT1', 'EPPIN', 'GKN2', 'PAGE5', 'MUC2', 'GCSAML-AS1', 'DMRTC1', 'BTN1A1', 'FAM205A', 'OR51B5', 'BCYRN1', 'DMP1', 'PPY2P', 'SCP2D1', 'ZCCHC13', 'SCARNA8', 'CHRNB3', 'LOC647859', 'HPVC1', 'SPOCK3', 'HMHB1', 'OCSTAMP', 'SPZ1', 'CRYGC', 'BPIFB3', 'ADAM29', 'ACER1', 'MAGEA12', 'PTH2', 'KRTAP4-3', 'ZFY', 'BPIFB4', 'LINC00479', 'ANKRD34C', 'GAGE2C', 'SLC32A1', 'NXPE1', 'CCKAR', 'KRTAP1-1', 'KRTAP1-5', 'TRIM48', 'ZAR1L', 'ASB15', 'FAM19A4', 'OR2T10', 'MS4A10', 'NUTM1', 'TMEM14E', 'VRTN', 'C4ORF51', 'KRT83', 'OR4F21', 'C6ORF10', 'KRT71', 'KRT3', 'C2ORF27B', 'KRTAP11-1', 'DAOA', 'KLRC4', 'HMSD', 'SOX1', 'LOC644669', 'AATK-AS1', 'ODF3', 'SPATA3', 'MMP20', 'CT47A1', 'ATOH7', 'AVP', 'AIRE', 'TPTE', 'CLEC4G', 'LINC01142', 'KCNU1', 'BTF3P11', 'FOXD4L3', 'MTVR2', 'OR2G6', 'PPP1R2P9', 'AADACL3', 'SSX9', 'RFX6', 'OR6S1', 'AFM', 'AKR1D1', 'LRRC52', 'C1ORF146', 'ZNF735', 'LOC400940', 'OACYLP', 'EPB42', 'TBR1', 'ASAP1-IT1', 'PCP4', 'B3GNT6', 'FAM170A', 'SLC22A10', 'GFI1B', 'MTNR1B', 'BTNL3', 'GNAS-AS1', 'MYH16', 'CPA2', 'LINC00303', 'IGLL1', 'HCRTR1', 'CNGA2', 'CA4', 'SH2D7', 'INSM2', 'CA6', 'CLCA1', 'HULC', 'CACNG7', 'PRR32', 'PRL', 'NF1P2', 'ZIM3', 'HYALP1', 'CT47A11', 'KRTAP3-2', 'CFHR4', 'TMEM132D', 'KCNJ16', 'USP50', 'TSPEAR-AS2', 'UGT1A4', 'PLA2G12B', 'TRIM55', 'NEUROG1', 'SSTR3', 'C11ORF87', 'SNORA72', 'DISC2', 'SERPINB11', 'NEUROD6', 'PRAMEF16', 'LINC01591', 'SNORA2B', 'PRSS48', 'GSC2', 'SNORA27', 'VWA5B1', 'OR51F1', 'OR10AD1', 'SCGB3A2', 'FERD3L', 'LINC00691', 'GABRR3', 'NKX6-2', 'RAPGEF4-AS1', 'ADRB3', 'GAGE12J', 'FAM47C', 'OR51L1', 'POM121L2', 'OR5H2', 'KRTAP12-1', 'C17ORF64', 'COX7B2', 'IFNW1', 'HIST1H3A', 'ANKRD20A20P', 'SLC10A1', 'LINC00032', 'GSTA5', 'KRTAP9-2', 'OR4D10', 'APCS', 'CGB2', 'OR5B17', 'AADAC', 'IFNL1', 'ZSCAN10', 'MMD2', 'FER1L6', 'UTS2R', 'OR51T1', 'LINC00452', 'MCF2', 'ART1', 'C12ORF56', 'OR52K2', 'MAGEA5', 'PATE3', 'CYP2C18', 'BAGE', 'PRDM9', 'GCGR', 'APOA5', 'PACRG-AS1', 'OLIG3', 'SNORD15B', 'SPINK14', 'B3GALT1', 'REG1B', 'CST9L', 'OR2A12', 'INS-IGF2', 'ISL1', 'DACH2', 'OTOP1', 'MT1B', 'GPR52', 'PDX1', 'TRIM49', 'NPSR1-AS1', 'CNTNAP5', 'OR4D5', 'FOXG1', 'NPHS2', 'EPGN', 'HAND1', 'LOC100130417', 'OR4N4', 'MYADML', 'PRSS57', 'MUC13', 'CLRN1', 'LINC00052', 'FAM138B', 'TRIM75P', 'HBM', 'PPBPP1', 'HRK', 'NHLH2', 'TAS2R42', 'NEUROG3', 'EXD1', 'OR13H1', 'IGFBP1', 'OR5K1', 'MMP21', 'PSKH2', 'OR10G8', 'ACSM2A', 'SYT10', 'CPNE6', 'COL20A1', 'MAGEA11', 'MAS1L', 'MBL2', 'PSG4', 'SSX5', 'ALAS2', 'LINC00202-2', 'ADCYAP1R1', 'SPINT3', 'HYMAI', 'CLEC4M', 'OR3A2', 'NPSR1', 'OPRM1', 'PPAN-P2RY11', 'NYAP2', 'TNP2', 'SLITRK1', 'CCER1', 'HIST2H2AB', 'VCX3A', 'PWAR4', 'SFTPB', 'PASD1', 'SHD', 'SLCO4A1-AS1', 'POU4F2', 'CALHM3', 'KRTAP10-6', 'GPHA2', 'C4ORF50', 'LHCGR', 'ADGRG7', 'OR2T2', 'PNLIPRP1', 'LINC01565', 'NBPF22P', 'TMEM202', 'TNFSF18', 'CACNG3', 'OR2K2', 'OTC', 'SCARNA14', 'RNF151', 'LOC392196', 'IFNL2', 'ARL14', 'SNORD115-26', 'H3F3AP5', 'IQCF2', 'NXNL1', 'CYP1A2', 'F2', 'SALL3', 'LOC285629', 'FOXR1', 'NMUR2', 'SNORA68', 'AWAT1', 'SDC4P', 'SNORA16A', 'SCTR', 'KCNB2', 'AMER3', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 2.5452540009860112e-15 NRMSE: 5.753936930001155e-16 MAPE: 3.002098733144683e-12 Pearson Correlation: 0.14434746381843597 Spearman Correlation: 0.10366463422237186 Coefficient of Determination: -2.232228267124431 RMSE: 1.1338533517361944 NRMSE: 0.3416249929907184 MAPE: 389.38339289413346 Predictor: ElasticNet Pearson Correlation: 0.8999415041628498 Spearman Correlation: 0.8814582342494509 Coefficient of Determination: 0.779669964150937 RMSE: 0.3163499455534263 NRMSE: 0.07151575574848565 MAPE: 198.9243975378089 Pearson Correlation: 0.447726007230953 Spearman Correlation: 0.28648486888863955 Coefficient of Determination: 0.1779442106384258 RMSE: 0.5718162884787865 NRMSE: 0.17228571511864613 MAPE: 228.39539734044422 Predictor: RandomForests Pearson Correlation: 0.6733375734774528 Spearman Correlation: 0.595904754764538 Coefficient of Determination: 0.44557411002277325 RMSE: 0.5018254267999848 NRMSE: 0.11344533215779014 MAPE: 211.0206971556343 Pearson Correlation: 0.5794445076832767 Spearman Correlation: 0.4806426611618116 Coefficient of Determination: 0.31468342940304617 RMSE: 0.5220973545560126 NRMSE: 0.15730562053510472 MAPE: 109.41454341709967 Protein: TP53 x_train_column_count: 1003 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'DEFB109P1', 'OR8J3', 'TXLNGY', 'OR52B4', 'IFNA16', 'LINC00111', 'SNORA20', 'RAB9BP1', 'DAZL', 'OR5AN1', 'OR2T34', 'F13B', 'KRTAP19-8', 'OR11L1', 'LGALS14', 'SST', 'HBG1', 'OR2M3', 'SNORD15A', 'OTX2', 'FAM183CP', 'CLEC6A', 'OR10V1', 'NXF2B', 'TMPRSS11F', 'GPR151', 'OR8S1', 'OR2M7', 'OR5H14', 'PRM3', 'MS4A6E', 'OR8G5', 'DNAJB8', 'OR2G2', 'FGF23', 'MBD3L5', 'SCGB1C1', 'OR8B3', 'OR10A5', 'WFDC5', 'TCP10L2', 'TMEM252', 'ACOT12', 'LOC145845', 'PRSS3P2', 'PPY', 'MAGEB10', 'LINC01205', 'TAAR9', 'TSGA13', 'PLA2G2F', 'PSAPL1', 'SUN3', 'PSG7', 'CRYAA', 'USP26', 'SPRR1B', 'TTTY14', 'KRTAP10-12', 'OR1S2', 'OR2AG1', 'PRAMEF8', 'HIST1H4F', 'NPPC', 'SNORD89', 'MC2R', 'C1ORF87', 'NOX3', 'C20ORF173', 'LEUTX', 'SFTA3', 'FOXN3-AS2', 'XAGE5', 'LOC391003', 'VWC2L', 'LINC00636', 'SDR16C6P', 'FAM169B', 'LOC391343', 'ACTRT2', 'RPL13AP17', 'SLC5A7', 'ALOX12B', 'CAPZA3', 'KRTAP19-1', 'OR4S1', 'BMP10', 'OR5B2', 'TTTY15', 'OPN1MW', 'RTP2', 'SLC38A8', 'C10ORF53', 'OR4D9', 'FMR1NB', 'P2RX3', 'ARHGAP36', 'ARR3', 'CCKBR', 'SNORA70B', 'STATH', 'CASC8', 'TBC1D28', 'C11ORF94', 'KRT39', 'OR1N1', 'C1ORF94', 'SNORA34', 'TAS2R60', 'ACTR3BP2', 'SSX8', 'HNRNPCL1', 'IFITM5', 'ANKRD18DP', 'PF4', 'BEND2', 'GAGE1', 'PROKR1', 'EDDM3A', 'CABS1', 'BPIFA3', 'KHDC1L', 'LINC00029', 'MMP23A', 'DEFB129', 'OR4C16', 'AKAP14', 'CYP11B2', 'HBD', 'OR10S1', 'LINC00114', 'PRSS1', 'DEFB104A', 'HSFY2', 'CABP5', 'CYP2W1', 'CYP3A4', 'SFTPC', 'CGB5', 'CCL15-CCL14', 'DMRT1', 'RGS8', 'PROP1', 'TKTL2', 'SERPINB4', 'CLRN2', 'KCNQ1DN', 'PRAP1', 'LINC00469', 'YWHAEP7', 'SNORA51', 'KRTAP25-1', 'DUXA', 'SNORA32', 'OR4F5', 'XKR7', 'OTP', 'SNORA54', 'SLC13A1', 'LHX9', 'SVOP', 'LGI3', 'KRTAP6-1', 'PAGE2', 'LOC646813', 'MYBPHL', 'OR6Y1', 'OR4K17', 'KRTAP19-2', 'TAS2R13', 'GAGE2D', 'OR7A17', 'OR2T35', 'FBP2', 'SPACA7', 'KRTAP19-3', 'ANKUB1', 'LOC285627', 'PLET1', 'GABRG3', 'INS', 'AVPR1B', 'PRAMEF20', 'OR4K2', 'NEU2', 'MGC27382', 'FCAMR', 'TCP10', 'LCNL1', 'CRLF2', 'LINC01101', 'OTOL1', 'DNTT', 'FDCSP', 'KRT85', 'FAM71C', 'C3ORF49', 'ZFAT-AS1', 'FOXE1', 'OR6B3', 'LINC00113', 'HPD', 'C9ORF135', 'IFNA13', 'KRTAP4-5', 'OR10H2', 'IZUMO1R', 'OLIG1', 'OR1L3', 'OR8H2', 'PRDM14', 'FGF6', 'XAGE3', 'SCARNA20', 'DAW1', 'GH1', 'TCEB3C', 'CCDC166', 'TMEM207', 'UGT2A3', 'PTF1A', 'SPANXN1', 'FAM27L', 'OR14I1', 'OR8G2', 'OR1L1', 'OLAH', 'PSG11', 'DEFB108B', 'DEFA4', 'ALPPL2', 'CYLC2', 'PRKAG3', 'SNORA47', 'SPATA19', 'IL26', 'FGA', 'PRG1', 'OR51I2', 'CER1', 'LINC00923', 'BARHL2', 'KRTAP10-1', 'C17ORF78', 'SLC25A31', 'SULT1C3', 'IVL', 'NANOS2', 'LCN9', 'HBBP1', 'LCE1D', 'PYDC2', 'TFF2', 'NKX2-1', 'ZNF479', 'PISRT1', 'OR5H6', 'GYS2', 'GUCY2EP', 'FTMT', 'LINC00696', 'DEFB110', 'OPRD1', 'OR4D6', 'MYBPC2', 'EPS8L3', 'LPO', 'TARM1', 'OR7E24', 'SCGB1A1', 'UCMA', 'HOXC12', 'SCN1A', 'ENAM', 'FMO6P', 'OR1E2', 'GAGE2B', 'CPLX3', 'OR14C36', 'OR6B2', 'OR1B1', 'LOC729609', 'CLCA4', 'OR6M1', 'RESP18', 'MAGEA9B', 'ST8SIA3', 'OR1K1', 'TTTY9B', 'CYP7A1', 'GBX2', 'PRAMEF1', 'SCARNA11', 'SBSN', 'HBZ', 'HBG2', 'GPR78', 'OR4C12', 'SERPINI2', 'FRMPD2B', 'ZNF679', 'SNORA59B', 'TTTY8', 'HAO1', 'LINC00326', 'SPATA31A3', 'FAM27B', 'KRTAP21-1', 'SLC1A6', 'LINC00488', 'HTR3E', 'SLITRK3', 'OR4M2', 'MAGEB6', 'OR2M4', 'C12ORF50', 'KRTAP19-6', 'LYZL1', 'ADGRD2', 'YIPF7', 'GPRC6A', 'OR12D2', 'CCL24', 'SYCN', 'SNAR-F', 'CGB8', 'LINC00608', 'NYX', 'ANP32D', 'ASB10', 'LOC286238', 'ANGPTL3', 'TMEM88B', 'ALX4', 'ALLC', 'OR6F1', 'SNORD94', 'OC90', 'CD200R1L', 'SNORA38B', 'OR6C74', 'LMNTD1', 'OR51G2', 'GPR148', 'FAM71B', 'DPPA2', 'BRINP3', 'OR6A2', 'SLC51B', 'OR6K6', 'DYDC1', 'OR51F2', 'POU6F2', 'GDPD2', 'DKFZP434K028', 'ADGRG4', 'FFAR1', 'MAP3K15', 'KRT13', 'KRTAP2-1', 'CNBD1', 'SRY', 'NTS', 'LINC00575', 'RAX2', 'LINC00934', 'SERPINB3', 'BET1P1', 'C10ORF120', 'MOGAT3', 'SPACA3', 'IL17F', 'IL36RN', 'ARID3C', 'OR11H4', 'SLC6A5', 'CNTN5', 'TRHR', 'SNORA37', 'TSKS', 'SNORA16B', 'LOC284798', 'OR13C3', 'KCNK4', 'TCERG1L', 'GUCA2B', 'LINC00304', 'OR2A14', 'KRT25', 'KCNMB2', 'SLC2A2', 'MYH1', 'IFNA7', 'LINC00410', 'APOC3', 'TMEM179', 'HBE1', 'BMP15', 'OR2L8', 'SLC22A12', 'SNORA71A', 'KIR3DL3', 'GAGE12F', 'LINC01312', 'PRB4', 'MUSK', 'SPRR2E', 'FAM25BP', 'NLRP8', 'OR2A2', 'SPATA31C1', 'ITIH1', 'SEC14L3', 'NKAIN3', 'RPS4Y2', 'SNORA74A', 'LINC00710', 'LINC00928', 'SNORA76C', 'ZNF705A', 'DCT', 'OR2AT4', 'FAM170B', 'GPR22', 'TDRG1', 'SLC17A6', 'OR56B1', 'MAGEB3', 'PAPOLB', 'MAGEA1', 'TNP1', 'LOC100130264', 'OR11H6', 'HTR1A', 'SSX6', 'LRRC30', 'USH1C', 'CSN3', 'OR10W1', 'PROKR2', 'SPANXN3', 'USP9Y', 'CFHR2', 'SOX3', 'CTRC', 'GDNF', 'EDDM3B', 'KCNIP4-IT1', 'EPPIN', 'GKN2', 'PAGE5', 'MUC2', 'GCSAML-AS1', 'DMRTC1', 'BTN1A1', 'FAM205A', 'OR51B5', 'BCYRN1', 'DMP1', 'PPY2P', 'SCP2D1', 'ZCCHC13', 'SCARNA8', 'CHRNB3', 'LOC647859', 'HPVC1', 'SPOCK3', 'HMHB1', 'OCSTAMP', 'SPZ1', 'CRYGC', 'BPIFB3', 'ADAM29', 'ACER1', 'MAGEA12', 'PTH2', 'KRTAP4-3', 'ZFY', 'BPIFB4', 'LINC00479', 'ANKRD34C', 'GAGE2C', 'SLC32A1', 'NXPE1', 'CCKAR', 'KRTAP1-1', 'KRTAP1-5', 'TRIM48', 'ZAR1L', 'ASB15', 'FAM19A4', 'OR2T10', 'MS4A10', 'NUTM1', 'TMEM14E', 'VRTN', 'C4ORF51', 'KRT83', 'OR4F21', 'C6ORF10', 'KRT71', 'KRT3', 'C2ORF27B', 'KRTAP11-1', 'DAOA', 'KLRC4', 'HMSD', 'SOX1', 'LOC644669', 'AATK-AS1', 'ODF3', 'SPATA3', 'MMP20', 'CT47A1', 'ATOH7', 'AVP', 'AIRE', 'TPTE', 'CLEC4G', 'LINC01142', 'KCNU1', 'BTF3P11', 'FOXD4L3', 'MTVR2', 'OR2G6', 'PPP1R2P9', 'AADACL3', 'SSX9', 'RFX6', 'OR6S1', 'AFM', 'AKR1D1', 'LRRC52', 'C1ORF146', 'ZNF735', 'LOC400940', 'OACYLP', 'EPB42', 'TBR1', 'ASAP1-IT1', 'PCP4', 'B3GNT6', 'FAM170A', 'SLC22A10', 'GFI1B', 'MTNR1B', 'BTNL3', 'GNAS-AS1', 'MYH16', 'CPA2', 'LINC00303', 'IGLL1', 'HCRTR1', 'CNGA2', 'CA4', 'SH2D7', 'INSM2', 'CA6', 'CLCA1', 'HULC', 'CACNG7', 'PRR32', 'PRL', 'NF1P2', 'ZIM3', 'HYALP1', 'CT47A11', 'KRTAP3-2', 'CFHR4', 'TMEM132D', 'KCNJ16', 'USP50', 'TSPEAR-AS2', 'UGT1A4', 'PLA2G12B', 'TRIM55', 'NEUROG1', 'SSTR3', 'C11ORF87', 'SNORA72', 'DISC2', 'SERPINB11', 'NEUROD6', 'PRAMEF16', 'LINC01591', 'SNORA2B', 'PRSS48', 'GSC2', 'SNORA27', 'VWA5B1', 'OR51F1', 'OR10AD1', 'SCGB3A2', 'FERD3L', 'LINC00691', 'GABRR3', 'NKX6-2', 'RAPGEF4-AS1', 'ADRB3', 'GAGE12J', 'FAM47C', 'OR51L1', 'POM121L2', 'OR5H2', 'KRTAP12-1', 'C17ORF64', 'COX7B2', 'IFNW1', 'HIST1H3A', 'ANKRD20A20P', 'SLC10A1', 'LINC00032', 'GSTA5', 'KRTAP9-2', 'OR4D10', 'APCS', 'CGB2', 'OR5B17', 'AADAC', 'IFNL1', 'ZSCAN10', 'MMD2', 'FER1L6', 'UTS2R', 'OR51T1', 'LINC00452', 'MCF2', 'ART1', 'C12ORF56', 'OR52K2', 'MAGEA5', 'PATE3', 'CYP2C18', 'BAGE', 'PRDM9', 'GCGR', 'APOA5', 'PACRG-AS1', 'OLIG3', 'SNORD15B', 'SPINK14', 'B3GALT1', 'REG1B', 'CST9L', 'OR2A12', 'INS-IGF2', 'ISL1', 'DACH2', 'OTOP1', 'MT1B', 'GPR52', 'PDX1', 'TRIM49', 'NPSR1-AS1', 'CNTNAP5', 'OR4D5', 'FOXG1', 'NPHS2', 'EPGN', 'HAND1', 'LOC100130417', 'OR4N4', 'MYADML', 'PRSS57', 'MUC13', 'CLRN1', 'LINC00052', 'FAM138B', 'TRIM75P', 'HBM', 'PPBPP1', 'HRK', 'NHLH2', 'TAS2R42', 'NEUROG3', 'EXD1', 'OR13H1', 'IGFBP1', 'OR5K1', 'MMP21', 'PSKH2', 'OR10G8', 'ACSM2A', 'SYT10', 'CPNE6', 'COL20A1', 'MAGEA11', 'MAS1L', 'MBL2', 'PSG4', 'SSX5', 'ALAS2', 'LINC00202-2', 'ADCYAP1R1', 'SPINT3', 'HYMAI', 'CLEC4M', 'OR3A2', 'NPSR1', 'OPRM1', 'PPAN-P2RY11', 'NYAP2', 'TNP2', 'SLITRK1', 'CCER1', 'HIST2H2AB', 'VCX3A', 'PWAR4', 'SFTPB', 'PASD1', 'SHD', 'SLCO4A1-AS1', 'POU4F2', 'CALHM3', 'KRTAP10-6', 'GPHA2', 'C4ORF50', 'LHCGR', 'ADGRG7', 'OR2T2', 'PNLIPRP1', 'LINC01565', 'NBPF22P', 'TMEM202', 'TNFSF18', 'CACNG3', 'OR2K2', 'OTC', 'SCARNA14', 'RNF151', 'LOC392196', 'IFNL2', 'ARL14', 'SNORD115-26', 'H3F3AP5', 'IQCF2', 'NXNL1', 'CYP1A2', 'F2', 'SALL3', 'LOC285629', 'FOXR1', 'NMUR2', 'SNORA68', 'AWAT1', 'SDC4P', 'SNORA16A', 'SCTR', 'KCNB2', 'AMER3', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.9533152041732012e-15 NRMSE: 4.694340793494837e-16 MAPE: 7.28973996936754e-12 Pearson Correlation: 0.25169496378633205 Spearman Correlation: 0.20407985136971785 Coefficient of Determination: -1.6457697786991101 RMSE: 0.7023783024788572 NRMSE: 0.2228923275193124 MAPE: 718.2878603805864 Predictor: ElasticNet Pearson Correlation: 0.8639429633155309 Spearman Correlation: 0.7967143481091111 Coefficient of Determination: 0.701555013184299 RMSE: 0.24590063246449725 NRMSE: 0.05909652306284482 MAPE: 409.0246190649695 Pearson Correlation: 0.46916078749040346 Spearman Correlation: 0.40020698512450287 Coefficient of Determination: 0.20798499197379816 RMSE: 0.3842923746061818 NRMSE: 0.12195112166989774 MAPE: 229.4877112986543 Predictor: RandomForests Pearson Correlation: 0.6554794006101635 Spearman Correlation: 0.5503354566830744 Coefficient of Determination: 0.36080838849234664 RMSE: 0.3598678382927371 NRMSE: 0.08648590201700003 MAPE: 540.9786670935528 Pearson Correlation: 0.613604399659856 Spearman Correlation: 0.49421334766625485 Coefficient of Determination: 0.2874274640521677 RMSE: 0.3645101292127265 NRMSE: 0.11567343526679566 MAPE: 188.5180424568354 Protein: CTNNB1 x_train_column_count: 1003 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'DEFB109P1', 'OR8J3', 'TXLNGY', 'OR52B4', 'IFNA16', 'LINC00111', 'SNORA20', 'RAB9BP1', 'DAZL', 'OR5AN1', 'OR2T34', 'F13B', 'KRTAP19-8', 'OR11L1', 'LGALS14', 'SST', 'HBG1', 'OR2M3', 'SNORD15A', 'OTX2', 'FAM183CP', 'CLEC6A', 'OR10V1', 'NXF2B', 'TMPRSS11F', 'GPR151', 'OR8S1', 'OR2M7', 'OR5H14', 'PRM3', 'MS4A6E', 'OR8G5', 'DNAJB8', 'OR2G2', 'FGF23', 'MBD3L5', 'SCGB1C1', 'OR8B3', 'OR10A5', 'WFDC5', 'TCP10L2', 'TMEM252', 'ACOT12', 'LOC145845', 'PRSS3P2', 'PPY', 'MAGEB10', 'LINC01205', 'TAAR9', 'TSGA13', 'PLA2G2F', 'PSAPL1', 'SUN3', 'PSG7', 'CRYAA', 'USP26', 'SPRR1B', 'TTTY14', 'KRTAP10-12', 'OR1S2', 'OR2AG1', 'PRAMEF8', 'HIST1H4F', 'NPPC', 'SNORD89', 'MC2R', 'C1ORF87', 'NOX3', 'C20ORF173', 'LEUTX', 'SFTA3', 'FOXN3-AS2', 'XAGE5', 'LOC391003', 'VWC2L', 'LINC00636', 'SDR16C6P', 'FAM169B', 'LOC391343', 'ACTRT2', 'RPL13AP17', 'SLC5A7', 'ALOX12B', 'CAPZA3', 'KRTAP19-1', 'OR4S1', 'BMP10', 'OR5B2', 'TTTY15', 'OPN1MW', 'RTP2', 'SLC38A8', 'C10ORF53', 'OR4D9', 'FMR1NB', 'P2RX3', 'ARHGAP36', 'ARR3', 'CCKBR', 'SNORA70B', 'STATH', 'CASC8', 'TBC1D28', 'C11ORF94', 'KRT39', 'OR1N1', 'C1ORF94', 'SNORA34', 'TAS2R60', 'ACTR3BP2', 'SSX8', 'HNRNPCL1', 'IFITM5', 'ANKRD18DP', 'PF4', 'BEND2', 'GAGE1', 'PROKR1', 'EDDM3A', 'CABS1', 'BPIFA3', 'KHDC1L', 'LINC00029', 'MMP23A', 'DEFB129', 'OR4C16', 'AKAP14', 'CYP11B2', 'HBD', 'OR10S1', 'LINC00114', 'PRSS1', 'DEFB104A', 'HSFY2', 'CABP5', 'CYP2W1', 'CYP3A4', 'SFTPC', 'CGB5', 'CCL15-CCL14', 'DMRT1', 'RGS8', 'PROP1', 'TKTL2', 'SERPINB4', 'CLRN2', 'KCNQ1DN', 'PRAP1', 'LINC00469', 'YWHAEP7', 'SNORA51', 'KRTAP25-1', 'DUXA', 'SNORA32', 'OR4F5', 'XKR7', 'OTP', 'SNORA54', 'SLC13A1', 'LHX9', 'SVOP', 'LGI3', 'KRTAP6-1', 'PAGE2', 'LOC646813', 'MYBPHL', 'OR6Y1', 'OR4K17', 'KRTAP19-2', 'TAS2R13', 'GAGE2D', 'OR7A17', 'OR2T35', 'FBP2', 'SPACA7', 'KRTAP19-3', 'ANKUB1', 'LOC285627', 'PLET1', 'GABRG3', 'INS', 'AVPR1B', 'PRAMEF20', 'OR4K2', 'NEU2', 'MGC27382', 'FCAMR', 'TCP10', 'LCNL1', 'CRLF2', 'LINC01101', 'OTOL1', 'DNTT', 'FDCSP', 'KRT85', 'FAM71C', 'C3ORF49', 'ZFAT-AS1', 'FOXE1', 'OR6B3', 'LINC00113', 'HPD', 'C9ORF135', 'IFNA13', 'KRTAP4-5', 'OR10H2', 'IZUMO1R', 'OLIG1', 'OR1L3', 'OR8H2', 'PRDM14', 'FGF6', 'XAGE3', 'SCARNA20', 'DAW1', 'GH1', 'TCEB3C', 'CCDC166', 'TMEM207', 'UGT2A3', 'PTF1A', 'SPANXN1', 'FAM27L', 'OR14I1', 'OR8G2', 'OR1L1', 'OLAH', 'PSG11', 'DEFB108B', 'DEFA4', 'ALPPL2', 'CYLC2', 'PRKAG3', 'SNORA47', 'SPATA19', 'IL26', 'FGA', 'PRG1', 'OR51I2', 'CER1', 'LINC00923', 'BARHL2', 'KRTAP10-1', 'C17ORF78', 'SLC25A31', 'SULT1C3', 'IVL', 'NANOS2', 'LCN9', 'HBBP1', 'LCE1D', 'PYDC2', 'TFF2', 'NKX2-1', 'ZNF479', 'PISRT1', 'OR5H6', 'GYS2', 'GUCY2EP', 'FTMT', 'LINC00696', 'DEFB110', 'OPRD1', 'OR4D6', 'MYBPC2', 'EPS8L3', 'LPO', 'TARM1', 'OR7E24', 'SCGB1A1', 'UCMA', 'HOXC12', 'SCN1A', 'ENAM', 'FMO6P', 'OR1E2', 'GAGE2B', 'CPLX3', 'OR14C36', 'OR6B2', 'OR1B1', 'LOC729609', 'CLCA4', 'OR6M1', 'RESP18', 'MAGEA9B', 'ST8SIA3', 'OR1K1', 'TTTY9B', 'CYP7A1', 'GBX2', 'PRAMEF1', 'SCARNA11', 'SBSN', 'HBZ', 'HBG2', 'GPR78', 'OR4C12', 'SERPINI2', 'FRMPD2B', 'ZNF679', 'SNORA59B', 'TTTY8', 'HAO1', 'LINC00326', 'SPATA31A3', 'FAM27B', 'KRTAP21-1', 'SLC1A6', 'LINC00488', 'HTR3E', 'SLITRK3', 'OR4M2', 'MAGEB6', 'OR2M4', 'C12ORF50', 'KRTAP19-6', 'LYZL1', 'ADGRD2', 'YIPF7', 'GPRC6A', 'OR12D2', 'CCL24', 'SYCN', 'SNAR-F', 'CGB8', 'LINC00608', 'NYX', 'ANP32D', 'ASB10', 'LOC286238', 'ANGPTL3', 'TMEM88B', 'ALX4', 'ALLC', 'OR6F1', 'SNORD94', 'OC90', 'CD200R1L', 'SNORA38B', 'OR6C74', 'LMNTD1', 'OR51G2', 'GPR148', 'FAM71B', 'DPPA2', 'BRINP3', 'OR6A2', 'SLC51B', 'OR6K6', 'DYDC1', 'OR51F2', 'POU6F2', 'GDPD2', 'DKFZP434K028', 'ADGRG4', 'FFAR1', 'MAP3K15', 'KRT13', 'KRTAP2-1', 'CNBD1', 'SRY', 'NTS', 'LINC00575', 'RAX2', 'LINC00934', 'SERPINB3', 'BET1P1', 'C10ORF120', 'MOGAT3', 'SPACA3', 'IL17F', 'IL36RN', 'ARID3C', 'OR11H4', 'SLC6A5', 'CNTN5', 'TRHR', 'SNORA37', 'TSKS', 'SNORA16B', 'LOC284798', 'OR13C3', 'KCNK4', 'TCERG1L', 'GUCA2B', 'LINC00304', 'OR2A14', 'KRT25', 'KCNMB2', 'SLC2A2', 'MYH1', 'IFNA7', 'LINC00410', 'APOC3', 'TMEM179', 'HBE1', 'BMP15', 'OR2L8', 'SLC22A12', 'SNORA71A', 'KIR3DL3', 'GAGE12F', 'LINC01312', 'PRB4', 'MUSK', 'SPRR2E', 'FAM25BP', 'NLRP8', 'OR2A2', 'SPATA31C1', 'ITIH1', 'SEC14L3', 'NKAIN3', 'RPS4Y2', 'SNORA74A', 'LINC00710', 'LINC00928', 'SNORA76C', 'ZNF705A', 'DCT', 'OR2AT4', 'FAM170B', 'GPR22', 'TDRG1', 'SLC17A6', 'OR56B1', 'MAGEB3', 'PAPOLB', 'MAGEA1', 'TNP1', 'LOC100130264', 'OR11H6', 'HTR1A', 'SSX6', 'LRRC30', 'USH1C', 'CSN3', 'OR10W1', 'PROKR2', 'SPANXN3', 'USP9Y', 'CFHR2', 'SOX3', 'CTRC', 'GDNF', 'EDDM3B', 'KCNIP4-IT1', 'EPPIN', 'GKN2', 'PAGE5', 'MUC2', 'GCSAML-AS1', 'DMRTC1', 'BTN1A1', 'FAM205A', 'OR51B5', 'BCYRN1', 'DMP1', 'PPY2P', 'SCP2D1', 'ZCCHC13', 'SCARNA8', 'CHRNB3', 'LOC647859', 'HPVC1', 'SPOCK3', 'HMHB1', 'OCSTAMP', 'SPZ1', 'CRYGC', 'BPIFB3', 'ADAM29', 'ACER1', 'MAGEA12', 'PTH2', 'KRTAP4-3', 'ZFY', 'BPIFB4', 'LINC00479', 'ANKRD34C', 'GAGE2C', 'SLC32A1', 'NXPE1', 'CCKAR', 'KRTAP1-1', 'KRTAP1-5', 'TRIM48', 'ZAR1L', 'ASB15', 'FAM19A4', 'OR2T10', 'MS4A10', 'NUTM1', 'TMEM14E', 'VRTN', 'C4ORF51', 'KRT83', 'OR4F21', 'C6ORF10', 'KRT71', 'KRT3', 'C2ORF27B', 'KRTAP11-1', 'DAOA', 'KLRC4', 'HMSD', 'SOX1', 'LOC644669', 'AATK-AS1', 'ODF3', 'SPATA3', 'MMP20', 'CT47A1', 'ATOH7', 'AVP', 'AIRE', 'TPTE', 'CLEC4G', 'LINC01142', 'KCNU1', 'BTF3P11', 'FOXD4L3', 'MTVR2', 'OR2G6', 'PPP1R2P9', 'AADACL3', 'SSX9', 'RFX6', 'OR6S1', 'AFM', 'AKR1D1', 'LRRC52', 'C1ORF146', 'ZNF735', 'LOC400940', 'OACYLP', 'EPB42', 'TBR1', 'ASAP1-IT1', 'PCP4', 'B3GNT6', 'FAM170A', 'SLC22A10', 'GFI1B', 'MTNR1B', 'BTNL3', 'GNAS-AS1', 'MYH16', 'CPA2', 'LINC00303', 'IGLL1', 'HCRTR1', 'CNGA2', 'CA4', 'SH2D7', 'INSM2', 'CA6', 'CLCA1', 'HULC', 'CACNG7', 'PRR32', 'PRL', 'NF1P2', 'ZIM3', 'HYALP1', 'CT47A11', 'KRTAP3-2', 'CFHR4', 'TMEM132D', 'KCNJ16', 'USP50', 'TSPEAR-AS2', 'UGT1A4', 'PLA2G12B', 'TRIM55', 'NEUROG1', 'SSTR3', 'C11ORF87', 'SNORA72', 'DISC2', 'SERPINB11', 'NEUROD6', 'PRAMEF16', 'LINC01591', 'SNORA2B', 'PRSS48', 'GSC2', 'SNORA27', 'VWA5B1', 'OR51F1', 'OR10AD1', 'SCGB3A2', 'FERD3L', 'LINC00691', 'GABRR3', 'NKX6-2', 'RAPGEF4-AS1', 'ADRB3', 'GAGE12J', 'FAM47C', 'OR51L1', 'POM121L2', 'OR5H2', 'KRTAP12-1', 'C17ORF64', 'COX7B2', 'IFNW1', 'HIST1H3A', 'ANKRD20A20P', 'SLC10A1', 'LINC00032', 'GSTA5', 'KRTAP9-2', 'OR4D10', 'APCS', 'CGB2', 'OR5B17', 'AADAC', 'IFNL1', 'ZSCAN10', 'MMD2', 'FER1L6', 'UTS2R', 'OR51T1', 'LINC00452', 'MCF2', 'ART1', 'C12ORF56', 'OR52K2', 'MAGEA5', 'PATE3', 'CYP2C18', 'BAGE', 'PRDM9', 'GCGR', 'APOA5', 'PACRG-AS1', 'OLIG3', 'SNORD15B', 'SPINK14', 'B3GALT1', 'REG1B', 'CST9L', 'OR2A12', 'INS-IGF2', 'ISL1', 'DACH2', 'OTOP1', 'MT1B', 'GPR52', 'PDX1', 'TRIM49', 'NPSR1-AS1', 'CNTNAP5', 'OR4D5', 'FOXG1', 'NPHS2', 'EPGN', 'HAND1', 'LOC100130417', 'OR4N4', 'MYADML', 'PRSS57', 'MUC13', 'CLRN1', 'LINC00052', 'FAM138B', 'TRIM75P', 'HBM', 'PPBPP1', 'HRK', 'NHLH2', 'TAS2R42', 'NEUROG3', 'EXD1', 'OR13H1', 'IGFBP1', 'OR5K1', 'MMP21', 'PSKH2', 'OR10G8', 'ACSM2A', 'SYT10', 'CPNE6', 'COL20A1', 'MAGEA11', 'MAS1L', 'MBL2', 'PSG4', 'SSX5', 'ALAS2', 'LINC00202-2', 'ADCYAP1R1', 'SPINT3', 'HYMAI', 'CLEC4M', 'OR3A2', 'NPSR1', 'OPRM1', 'PPAN-P2RY11', 'NYAP2', 'TNP2', 'SLITRK1', 'CCER1', 'HIST2H2AB', 'VCX3A', 'PWAR4', 'SFTPB', 'PASD1', 'SHD', 'SLCO4A1-AS1', 'POU4F2', 'CALHM3', 'KRTAP10-6', 'GPHA2', 'C4ORF50', 'LHCGR', 'ADGRG7', 'OR2T2', 'PNLIPRP1', 'LINC01565', 'NBPF22P', 'TMEM202', 'TNFSF18', 'CACNG3', 'OR2K2', 'OTC', 'SCARNA14', 'RNF151', 'LOC392196', 'IFNL2', 'ARL14', 'SNORD115-26', 'H3F3AP5', 'IQCF2', 'NXNL1', 'CYP1A2', 'F2', 'SALL3', 'LOC285629', 'FOXR1', 'NMUR2', 'SNORA68', 'AWAT1', 'SDC4P', 'SNORA16A', 'SCTR', 'KCNB2', 'AMER3', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 3.1297354471032873e-15 NRMSE: 7.559017116953163e-16 MAPE: 2.976168192052226e-12 Pearson Correlation: 0.05353888788606333 Spearman Correlation: 0.011204628486639485 Coefficient of Determination: -1.5609183398286586 RMSE: 1.284157092532732 NRMSE: 0.2699850921984551 MAPE: 684.973089017786 Predictor: ElasticNet Pearson Correlation: 0.8830869714725302 Spearman Correlation: 0.8839238808421459 Coefficient of Determination: 0.7345012467369539 RMSE: 0.36657385231744016 NRMSE: 0.0885358545834799 MAPE: 352.8801982941252 Pearson Correlation: 0.18620284972874715 Spearman Correlation: 0.1904687090861482 Coefficient of Determination: -0.09409561732858851 RMSE: 0.8393593426531603 NRMSE: 0.1764694606536793 MAPE: 600.4227737368318 Predictor: RandomForests Pearson Correlation: 0.5107080497160787 Spearman Correlation: 0.5590889050610455 Coefficient of Determination: 0.21862823013812638 RMSE: 0.6288674245878954 NRMSE: 0.15188566915947624 MAPE: 508.7703963024707 Pearson Correlation: 0.0509370913536166 Spearman Correlation: 0.11746530505367898 Coefficient of Determination: -0.11605001438247142 RMSE: 0.8477389123457137 NRMSE: 0.178231206867739 MAPE: 731.0720073221628 Protein: CCNE1 x_train_column_count: 1003 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'DEFB109P1', 'OR8J3', 'TXLNGY', 'OR52B4', 'IFNA16', 'LINC00111', 'SNORA20', 'RAB9BP1', 'DAZL', 'OR5AN1', 'OR2T34', 'F13B', 'KRTAP19-8', 'OR11L1', 'LGALS14', 'SST', 'HBG1', 'OR2M3', 'SNORD15A', 'OTX2', 'FAM183CP', 'CLEC6A', 'OR10V1', 'NXF2B', 'TMPRSS11F', 'GPR151', 'OR8S1', 'OR2M7', 'OR5H14', 'PRM3', 'MS4A6E', 'OR8G5', 'DNAJB8', 'OR2G2', 'FGF23', 'MBD3L5', 'SCGB1C1', 'OR8B3', 'OR10A5', 'WFDC5', 'TCP10L2', 'TMEM252', 'ACOT12', 'LOC145845', 'PRSS3P2', 'PPY', 'MAGEB10', 'LINC01205', 'TAAR9', 'TSGA13', 'PLA2G2F', 'PSAPL1', 'SUN3', 'PSG7', 'CRYAA', 'USP26', 'SPRR1B', 'TTTY14', 'KRTAP10-12', 'OR1S2', 'OR2AG1', 'PRAMEF8', 'HIST1H4F', 'NPPC', 'SNORD89', 'MC2R', 'C1ORF87', 'NOX3', 'C20ORF173', 'LEUTX', 'SFTA3', 'FOXN3-AS2', 'XAGE5', 'LOC391003', 'VWC2L', 'LINC00636', 'SDR16C6P', 'FAM169B', 'LOC391343', 'ACTRT2', 'RPL13AP17', 'SLC5A7', 'ALOX12B', 'CAPZA3', 'KRTAP19-1', 'OR4S1', 'BMP10', 'OR5B2', 'TTTY15', 'OPN1MW', 'RTP2', 'SLC38A8', 'C10ORF53', 'OR4D9', 'FMR1NB', 'P2RX3', 'ARHGAP36', 'ARR3', 'CCKBR', 'SNORA70B', 'STATH', 'CASC8', 'TBC1D28', 'C11ORF94', 'KRT39', 'OR1N1', 'C1ORF94', 'SNORA34', 'TAS2R60', 'ACTR3BP2', 'SSX8', 'HNRNPCL1', 'IFITM5', 'ANKRD18DP', 'PF4', 'BEND2', 'GAGE1', 'PROKR1', 'EDDM3A', 'CABS1', 'BPIFA3', 'KHDC1L', 'LINC00029', 'MMP23A', 'DEFB129', 'OR4C16', 'AKAP14', 'CYP11B2', 'HBD', 'OR10S1', 'LINC00114', 'PRSS1', 'DEFB104A', 'HSFY2', 'CABP5', 'CYP2W1', 'CYP3A4', 'SFTPC', 'CGB5', 'CCL15-CCL14', 'DMRT1', 'RGS8', 'PROP1', 'TKTL2', 'SERPINB4', 'CLRN2', 'KCNQ1DN', 'PRAP1', 'LINC00469', 'YWHAEP7', 'SNORA51', 'KRTAP25-1', 'DUXA', 'SNORA32', 'OR4F5', 'XKR7', 'OTP', 'SNORA54', 'SLC13A1', 'LHX9', 'SVOP', 'LGI3', 'KRTAP6-1', 'PAGE2', 'LOC646813', 'MYBPHL', 'OR6Y1', 'OR4K17', 'KRTAP19-2', 'TAS2R13', 'GAGE2D', 'OR7A17', 'OR2T35', 'FBP2', 'SPACA7', 'KRTAP19-3', 'ANKUB1', 'LOC285627', 'PLET1', 'GABRG3', 'INS', 'AVPR1B', 'PRAMEF20', 'OR4K2', 'NEU2', 'MGC27382', 'FCAMR', 'TCP10', 'LCNL1', 'CRLF2', 'LINC01101', 'OTOL1', 'DNTT', 'FDCSP', 'KRT85', 'FAM71C', 'C3ORF49', 'ZFAT-AS1', 'FOXE1', 'OR6B3', 'LINC00113', 'HPD', 'C9ORF135', 'IFNA13', 'KRTAP4-5', 'OR10H2', 'IZUMO1R', 'OLIG1', 'OR1L3', 'OR8H2', 'PRDM14', 'FGF6', 'XAGE3', 'SCARNA20', 'DAW1', 'GH1', 'TCEB3C', 'CCDC166', 'TMEM207', 'UGT2A3', 'PTF1A', 'SPANXN1', 'FAM27L', 'OR14I1', 'OR8G2', 'OR1L1', 'OLAH', 'PSG11', 'DEFB108B', 'DEFA4', 'ALPPL2', 'CYLC2', 'PRKAG3', 'SNORA47', 'SPATA19', 'IL26', 'FGA', 'PRG1', 'OR51I2', 'CER1', 'LINC00923', 'BARHL2', 'KRTAP10-1', 'C17ORF78', 'SLC25A31', 'SULT1C3', 'IVL', 'NANOS2', 'LCN9', 'HBBP1', 'LCE1D', 'PYDC2', 'TFF2', 'NKX2-1', 'ZNF479', 'PISRT1', 'OR5H6', 'GYS2', 'GUCY2EP', 'FTMT', 'LINC00696', 'DEFB110', 'OPRD1', 'OR4D6', 'MYBPC2', 'EPS8L3', 'LPO', 'TARM1', 'OR7E24', 'SCGB1A1', 'UCMA', 'HOXC12', 'SCN1A', 'ENAM', 'FMO6P', 'OR1E2', 'GAGE2B', 'CPLX3', 'OR14C36', 'OR6B2', 'OR1B1', 'LOC729609', 'CLCA4', 'OR6M1', 'RESP18', 'MAGEA9B', 'ST8SIA3', 'OR1K1', 'TTTY9B', 'CYP7A1', 'GBX2', 'PRAMEF1', 'SCARNA11', 'SBSN', 'HBZ', 'HBG2', 'GPR78', 'OR4C12', 'SERPINI2', 'FRMPD2B', 'ZNF679', 'SNORA59B', 'TTTY8', 'HAO1', 'LINC00326', 'SPATA31A3', 'FAM27B', 'KRTAP21-1', 'SLC1A6', 'LINC00488', 'HTR3E', 'SLITRK3', 'OR4M2', 'MAGEB6', 'OR2M4', 'C12ORF50', 'KRTAP19-6', 'LYZL1', 'ADGRD2', 'YIPF7', 'GPRC6A', 'OR12D2', 'CCL24', 'SYCN', 'SNAR-F', 'CGB8', 'LINC00608', 'NYX', 'ANP32D', 'ASB10', 'LOC286238', 'ANGPTL3', 'TMEM88B', 'ALX4', 'ALLC', 'OR6F1', 'SNORD94', 'OC90', 'CD200R1L', 'SNORA38B', 'OR6C74', 'LMNTD1', 'OR51G2', 'GPR148', 'FAM71B', 'DPPA2', 'BRINP3', 'OR6A2', 'SLC51B', 'OR6K6', 'DYDC1', 'OR51F2', 'POU6F2', 'GDPD2', 'DKFZP434K028', 'ADGRG4', 'FFAR1', 'MAP3K15', 'KRT13', 'KRTAP2-1', 'CNBD1', 'SRY', 'NTS', 'LINC00575', 'RAX2', 'LINC00934', 'SERPINB3', 'BET1P1', 'C10ORF120', 'MOGAT3', 'SPACA3', 'IL17F', 'IL36RN', 'ARID3C', 'OR11H4', 'SLC6A5', 'CNTN5', 'TRHR', 'SNORA37', 'TSKS', 'SNORA16B', 'LOC284798', 'OR13C3', 'KCNK4', 'TCERG1L', 'GUCA2B', 'LINC00304', 'OR2A14', 'KRT25', 'KCNMB2', 'SLC2A2', 'MYH1', 'IFNA7', 'LINC00410', 'APOC3', 'TMEM179', 'HBE1', 'BMP15', 'OR2L8', 'SLC22A12', 'SNORA71A', 'KIR3DL3', 'GAGE12F', 'LINC01312', 'PRB4', 'MUSK', 'SPRR2E', 'FAM25BP', 'NLRP8', 'OR2A2', 'SPATA31C1', 'ITIH1', 'SEC14L3', 'NKAIN3', 'RPS4Y2', 'SNORA74A', 'LINC00710', 'LINC00928', 'SNORA76C', 'ZNF705A', 'DCT', 'OR2AT4', 'FAM170B', 'GPR22', 'TDRG1', 'SLC17A6', 'OR56B1', 'MAGEB3', 'PAPOLB', 'MAGEA1', 'TNP1', 'LOC100130264', 'OR11H6', 'HTR1A', 'SSX6', 'LRRC30', 'USH1C', 'CSN3', 'OR10W1', 'PROKR2', 'SPANXN3', 'USP9Y', 'CFHR2', 'SOX3', 'CTRC', 'GDNF', 'EDDM3B', 'KCNIP4-IT1', 'EPPIN', 'GKN2', 'PAGE5', 'MUC2', 'GCSAML-AS1', 'DMRTC1', 'BTN1A1', 'FAM205A', 'OR51B5', 'BCYRN1', 'DMP1', 'PPY2P', 'SCP2D1', 'ZCCHC13', 'SCARNA8', 'CHRNB3', 'LOC647859', 'HPVC1', 'SPOCK3', 'HMHB1', 'OCSTAMP', 'SPZ1', 'CRYGC', 'BPIFB3', 'ADAM29', 'ACER1', 'MAGEA12', 'PTH2', 'KRTAP4-3', 'ZFY', 'BPIFB4', 'LINC00479', 'ANKRD34C', 'GAGE2C', 'SLC32A1', 'NXPE1', 'CCKAR', 'KRTAP1-1', 'KRTAP1-5', 'TRIM48', 'ZAR1L', 'ASB15', 'FAM19A4', 'OR2T10', 'MS4A10', 'NUTM1', 'TMEM14E', 'VRTN', 'C4ORF51', 'KRT83', 'OR4F21', 'C6ORF10', 'KRT71', 'KRT3', 'C2ORF27B', 'KRTAP11-1', 'DAOA', 'KLRC4', 'HMSD', 'SOX1', 'LOC644669', 'AATK-AS1', 'ODF3', 'SPATA3', 'MMP20', 'CT47A1', 'ATOH7', 'AVP', 'AIRE', 'TPTE', 'CLEC4G', 'LINC01142', 'KCNU1', 'BTF3P11', 'FOXD4L3', 'MTVR2', 'OR2G6', 'PPP1R2P9', 'AADACL3', 'SSX9', 'RFX6', 'OR6S1', 'AFM', 'AKR1D1', 'LRRC52', 'C1ORF146', 'ZNF735', 'LOC400940', 'OACYLP', 'EPB42', 'TBR1', 'ASAP1-IT1', 'PCP4', 'B3GNT6', 'FAM170A', 'SLC22A10', 'GFI1B', 'MTNR1B', 'BTNL3', 'GNAS-AS1', 'MYH16', 'CPA2', 'LINC00303', 'IGLL1', 'HCRTR1', 'CNGA2', 'CA4', 'SH2D7', 'INSM2', 'CA6', 'CLCA1', 'HULC', 'CACNG7', 'PRR32', 'PRL', 'NF1P2', 'ZIM3', 'HYALP1', 'CT47A11', 'KRTAP3-2', 'CFHR4', 'TMEM132D', 'KCNJ16', 'USP50', 'TSPEAR-AS2', 'UGT1A4', 'PLA2G12B', 'TRIM55', 'NEUROG1', 'SSTR3', 'C11ORF87', 'SNORA72', 'DISC2', 'SERPINB11', 'NEUROD6', 'PRAMEF16', 'LINC01591', 'SNORA2B', 'PRSS48', 'GSC2', 'SNORA27', 'VWA5B1', 'OR51F1', 'OR10AD1', 'SCGB3A2', 'FERD3L', 'LINC00691', 'GABRR3', 'NKX6-2', 'RAPGEF4-AS1', 'ADRB3', 'GAGE12J', 'FAM47C', 'OR51L1', 'POM121L2', 'OR5H2', 'KRTAP12-1', 'C17ORF64', 'COX7B2', 'IFNW1', 'HIST1H3A', 'ANKRD20A20P', 'SLC10A1', 'LINC00032', 'GSTA5', 'KRTAP9-2', 'OR4D10', 'APCS', 'CGB2', 'OR5B17', 'AADAC', 'IFNL1', 'ZSCAN10', 'MMD2', 'FER1L6', 'UTS2R', 'OR51T1', 'LINC00452', 'MCF2', 'ART1', 'C12ORF56', 'OR52K2', 'MAGEA5', 'PATE3', 'CYP2C18', 'BAGE', 'PRDM9', 'GCGR', 'APOA5', 'PACRG-AS1', 'OLIG3', 'SNORD15B', 'SPINK14', 'B3GALT1', 'REG1B', 'CST9L', 'OR2A12', 'INS-IGF2', 'ISL1', 'DACH2', 'OTOP1', 'MT1B', 'GPR52', 'PDX1', 'TRIM49', 'NPSR1-AS1', 'CNTNAP5', 'OR4D5', 'FOXG1', 'NPHS2', 'EPGN', 'HAND1', 'LOC100130417', 'OR4N4', 'MYADML', 'PRSS57', 'MUC13', 'CLRN1', 'LINC00052', 'FAM138B', 'TRIM75P', 'HBM', 'PPBPP1', 'HRK', 'NHLH2', 'TAS2R42', 'NEUROG3', 'EXD1', 'OR13H1', 'IGFBP1', 'OR5K1', 'MMP21', 'PSKH2', 'OR10G8', 'ACSM2A', 'SYT10', 'CPNE6', 'COL20A1', 'MAGEA11', 'MAS1L', 'MBL2', 'PSG4', 'SSX5', 'ALAS2', 'LINC00202-2', 'ADCYAP1R1', 'SPINT3', 'HYMAI', 'CLEC4M', 'OR3A2', 'NPSR1', 'OPRM1', 'PPAN-P2RY11', 'NYAP2', 'TNP2', 'SLITRK1', 'CCER1', 'HIST2H2AB', 'VCX3A', 'PWAR4', 'SFTPB', 'PASD1', 'SHD', 'SLCO4A1-AS1', 'POU4F2', 'CALHM3', 'KRTAP10-6', 'GPHA2', 'C4ORF50', 'LHCGR', 'ADGRG7', 'OR2T2', 'PNLIPRP1', 'LINC01565', 'NBPF22P', 'TMEM202', 'TNFSF18', 'CACNG3', 'OR2K2', 'OTC', 'SCARNA14', 'RNF151', 'LOC392196', 'IFNL2', 'ARL14', 'SNORD115-26', 'H3F3AP5', 'IQCF2', 'NXNL1', 'CYP1A2', 'F2', 'SALL3', 'LOC285629', 'FOXR1', 'NMUR2', 'SNORA68', 'AWAT1', 'SDC4P', 'SNORA16A', 'SCTR', 'KCNB2', 'AMER3', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.5388611434003819e-15 NRMSE: 3.7137368617428433e-16 MAPE: 3.11151560620076e-13 Pearson Correlation: 0.382129036294307 Spearman Correlation: 0.27368171672963504 Coefficient of Determination: -0.15281641560065973 RMSE: 0.4854081813532766 NRMSE: 0.19807727958592863 MAPE: 145.61022440269699 Predictor: ElasticNet Pearson Correlation: 0.9321589941279852 Spearman Correlation: 0.816784929320791 Coefficient of Determination: 0.8533501424678742 RMSE: 0.19331426740838395 NRMSE: 0.046652573161277106 MAPE: 51.35119747067921 Pearson Correlation: 0.7604174965723667 Spearman Correlation: 0.4874150550505617 Coefficient of Determination: 0.5376555779177665 RMSE: 0.3074042214234952 NRMSE: 0.12544039068942106 MAPE: 102.18215907198227 Predictor: RandomForests Pearson Correlation: 0.8582292342353772 Spearman Correlation: 0.7168469137097238 Coefficient of Determination: 0.731177419091309 RMSE: 0.26173147848559275 NRMSE: 0.06316371322383202 MAPE: 55.9650704093864 Pearson Correlation: 0.8394988084067936 Spearman Correlation: 0.7086185752833065 Coefficient of Determination: 0.6966524826392317 RMSE: 0.248998790988408 NRMSE: 0.10160727617253246 MAPE: 73.6730986593807 Protein: CCND1 x_train_column_count: 1003 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'DEFB109P1', 'OR8J3', 'TXLNGY', 'OR52B4', 'IFNA16', 'LINC00111', 'SNORA20', 'RAB9BP1', 'DAZL', 'OR5AN1', 'OR2T34', 'F13B', 'KRTAP19-8', 'OR11L1', 'LGALS14', 'SST', 'HBG1', 'OR2M3', 'SNORD15A', 'OTX2', 'FAM183CP', 'CLEC6A', 'OR10V1', 'NXF2B', 'TMPRSS11F', 'GPR151', 'OR8S1', 'OR2M7', 'OR5H14', 'PRM3', 'MS4A6E', 'OR8G5', 'DNAJB8', 'OR2G2', 'FGF23', 'MBD3L5', 'SCGB1C1', 'OR8B3', 'OR10A5', 'WFDC5', 'TCP10L2', 'TMEM252', 'ACOT12', 'LOC145845', 'PRSS3P2', 'PPY', 'MAGEB10', 'LINC01205', 'TAAR9', 'TSGA13', 'PLA2G2F', 'PSAPL1', 'SUN3', 'PSG7', 'CRYAA', 'USP26', 'SPRR1B', 'TTTY14', 'KRTAP10-12', 'OR1S2', 'OR2AG1', 'PRAMEF8', 'HIST1H4F', 'NPPC', 'SNORD89', 'MC2R', 'C1ORF87', 'NOX3', 'C20ORF173', 'LEUTX', 'SFTA3', 'FOXN3-AS2', 'XAGE5', 'LOC391003', 'VWC2L', 'LINC00636', 'SDR16C6P', 'FAM169B', 'LOC391343', 'ACTRT2', 'RPL13AP17', 'SLC5A7', 'ALOX12B', 'CAPZA3', 'KRTAP19-1', 'OR4S1', 'BMP10', 'OR5B2', 'TTTY15', 'OPN1MW', 'RTP2', 'SLC38A8', 'C10ORF53', 'OR4D9', 'FMR1NB', 'P2RX3', 'ARHGAP36', 'ARR3', 'CCKBR', 'SNORA70B', 'STATH', 'CASC8', 'TBC1D28', 'C11ORF94', 'KRT39', 'OR1N1', 'C1ORF94', 'SNORA34', 'TAS2R60', 'ACTR3BP2', 'SSX8', 'HNRNPCL1', 'IFITM5', 'ANKRD18DP', 'PF4', 'BEND2', 'GAGE1', 'PROKR1', 'EDDM3A', 'CABS1', 'BPIFA3', 'KHDC1L', 'LINC00029', 'MMP23A', 'DEFB129', 'OR4C16', 'AKAP14', 'CYP11B2', 'HBD', 'OR10S1', 'LINC00114', 'PRSS1', 'DEFB104A', 'HSFY2', 'CABP5', 'CYP2W1', 'CYP3A4', 'SFTPC', 'CGB5', 'CCL15-CCL14', 'DMRT1', 'RGS8', 'PROP1', 'TKTL2', 'SERPINB4', 'CLRN2', 'KCNQ1DN', 'PRAP1', 'LINC00469', 'YWHAEP7', 'SNORA51', 'KRTAP25-1', 'DUXA', 'SNORA32', 'OR4F5', 'XKR7', 'OTP', 'SNORA54', 'SLC13A1', 'LHX9', 'SVOP', 'LGI3', 'KRTAP6-1', 'PAGE2', 'LOC646813', 'MYBPHL', 'OR6Y1', 'OR4K17', 'KRTAP19-2', 'TAS2R13', 'GAGE2D', 'OR7A17', 'OR2T35', 'FBP2', 'SPACA7', 'KRTAP19-3', 'ANKUB1', 'LOC285627', 'PLET1', 'GABRG3', 'INS', 'AVPR1B', 'PRAMEF20', 'OR4K2', 'NEU2', 'MGC27382', 'FCAMR', 'TCP10', 'LCNL1', 'CRLF2', 'LINC01101', 'OTOL1', 'DNTT', 'FDCSP', 'KRT85', 'FAM71C', 'C3ORF49', 'ZFAT-AS1', 'FOXE1', 'OR6B3', 'LINC00113', 'HPD', 'C9ORF135', 'IFNA13', 'KRTAP4-5', 'OR10H2', 'IZUMO1R', 'OLIG1', 'OR1L3', 'OR8H2', 'PRDM14', 'FGF6', 'XAGE3', 'SCARNA20', 'DAW1', 'GH1', 'TCEB3C', 'CCDC166', 'TMEM207', 'UGT2A3', 'PTF1A', 'SPANXN1', 'FAM27L', 'OR14I1', 'OR8G2', 'OR1L1', 'OLAH', 'PSG11', 'DEFB108B', 'DEFA4', 'ALPPL2', 'CYLC2', 'PRKAG3', 'SNORA47', 'SPATA19', 'IL26', 'FGA', 'PRG1', 'OR51I2', 'CER1', 'LINC00923', 'BARHL2', 'KRTAP10-1', 'C17ORF78', 'SLC25A31', 'SULT1C3', 'IVL', 'NANOS2', 'LCN9', 'HBBP1', 'LCE1D', 'PYDC2', 'TFF2', 'NKX2-1', 'ZNF479', 'PISRT1', 'OR5H6', 'GYS2', 'GUCY2EP', 'FTMT', 'LINC00696', 'DEFB110', 'OPRD1', 'OR4D6', 'MYBPC2', 'EPS8L3', 'LPO', 'TARM1', 'OR7E24', 'SCGB1A1', 'UCMA', 'HOXC12', 'SCN1A', 'ENAM', 'FMO6P', 'OR1E2', 'GAGE2B', 'CPLX3', 'OR14C36', 'OR6B2', 'OR1B1', 'LOC729609', 'CLCA4', 'OR6M1', 'RESP18', 'MAGEA9B', 'ST8SIA3', 'OR1K1', 'TTTY9B', 'CYP7A1', 'GBX2', 'PRAMEF1', 'SCARNA11', 'SBSN', 'HBZ', 'HBG2', 'GPR78', 'OR4C12', 'SERPINI2', 'FRMPD2B', 'ZNF679', 'SNORA59B', 'TTTY8', 'HAO1', 'LINC00326', 'SPATA31A3', 'FAM27B', 'KRTAP21-1', 'SLC1A6', 'LINC00488', 'HTR3E', 'SLITRK3', 'OR4M2', 'MAGEB6', 'OR2M4', 'C12ORF50', 'KRTAP19-6', 'LYZL1', 'ADGRD2', 'YIPF7', 'GPRC6A', 'OR12D2', 'CCL24', 'SYCN', 'SNAR-F', 'CGB8', 'LINC00608', 'NYX', 'ANP32D', 'ASB10', 'LOC286238', 'ANGPTL3', 'TMEM88B', 'ALX4', 'ALLC', 'OR6F1', 'SNORD94', 'OC90', 'CD200R1L', 'SNORA38B', 'OR6C74', 'LMNTD1', 'OR51G2', 'GPR148', 'FAM71B', 'DPPA2', 'BRINP3', 'OR6A2', 'SLC51B', 'OR6K6', 'DYDC1', 'OR51F2', 'POU6F2', 'GDPD2', 'DKFZP434K028', 'ADGRG4', 'FFAR1', 'MAP3K15', 'KRT13', 'KRTAP2-1', 'CNBD1', 'SRY', 'NTS', 'LINC00575', 'RAX2', 'LINC00934', 'SERPINB3', 'BET1P1', 'C10ORF120', 'MOGAT3', 'SPACA3', 'IL17F', 'IL36RN', 'ARID3C', 'OR11H4', 'SLC6A5', 'CNTN5', 'TRHR', 'SNORA37', 'TSKS', 'SNORA16B', 'LOC284798', 'OR13C3', 'KCNK4', 'TCERG1L', 'GUCA2B', 'LINC00304', 'OR2A14', 'KRT25', 'KCNMB2', 'SLC2A2', 'MYH1', 'IFNA7', 'LINC00410', 'APOC3', 'TMEM179', 'HBE1', 'BMP15', 'OR2L8', 'SLC22A12', 'SNORA71A', 'KIR3DL3', 'GAGE12F', 'LINC01312', 'PRB4', 'MUSK', 'SPRR2E', 'FAM25BP', 'NLRP8', 'OR2A2', 'SPATA31C1', 'ITIH1', 'SEC14L3', 'NKAIN3', 'RPS4Y2', 'SNORA74A', 'LINC00710', 'LINC00928', 'SNORA76C', 'ZNF705A', 'DCT', 'OR2AT4', 'FAM170B', 'GPR22', 'TDRG1', 'SLC17A6', 'OR56B1', 'MAGEB3', 'PAPOLB', 'MAGEA1', 'TNP1', 'LOC100130264', 'OR11H6', 'HTR1A', 'SSX6', 'LRRC30', 'USH1C', 'CSN3', 'OR10W1', 'PROKR2', 'SPANXN3', 'USP9Y', 'CFHR2', 'SOX3', 'CTRC', 'GDNF', 'EDDM3B', 'KCNIP4-IT1', 'EPPIN', 'GKN2', 'PAGE5', 'MUC2', 'GCSAML-AS1', 'DMRTC1', 'BTN1A1', 'FAM205A', 'OR51B5', 'BCYRN1', 'DMP1', 'PPY2P', 'SCP2D1', 'ZCCHC13', 'SCARNA8', 'CHRNB3', 'LOC647859', 'HPVC1', 'SPOCK3', 'HMHB1', 'OCSTAMP', 'SPZ1', 'CRYGC', 'BPIFB3', 'ADAM29', 'ACER1', 'MAGEA12', 'PTH2', 'KRTAP4-3', 'ZFY', 'BPIFB4', 'LINC00479', 'ANKRD34C', 'GAGE2C', 'SLC32A1', 'NXPE1', 'CCKAR', 'KRTAP1-1', 'KRTAP1-5', 'TRIM48', 'ZAR1L', 'ASB15', 'FAM19A4', 'OR2T10', 'MS4A10', 'NUTM1', 'TMEM14E', 'VRTN', 'C4ORF51', 'KRT83', 'OR4F21', 'C6ORF10', 'KRT71', 'KRT3', 'C2ORF27B', 'KRTAP11-1', 'DAOA', 'KLRC4', 'HMSD', 'SOX1', 'LOC644669', 'AATK-AS1', 'ODF3', 'SPATA3', 'MMP20', 'CT47A1', 'ATOH7', 'AVP', 'AIRE', 'TPTE', 'CLEC4G', 'LINC01142', 'KCNU1', 'BTF3P11', 'FOXD4L3', 'MTVR2', 'OR2G6', 'PPP1R2P9', 'AADACL3', 'SSX9', 'RFX6', 'OR6S1', 'AFM', 'AKR1D1', 'LRRC52', 'C1ORF146', 'ZNF735', 'LOC400940', 'OACYLP', 'EPB42', 'TBR1', 'ASAP1-IT1', 'PCP4', 'B3GNT6', 'FAM170A', 'SLC22A10', 'GFI1B', 'MTNR1B', 'BTNL3', 'GNAS-AS1', 'MYH16', 'CPA2', 'LINC00303', 'IGLL1', 'HCRTR1', 'CNGA2', 'CA4', 'SH2D7', 'INSM2', 'CA6', 'CLCA1', 'HULC', 'CACNG7', 'PRR32', 'PRL', 'NF1P2', 'ZIM3', 'HYALP1', 'CT47A11', 'KRTAP3-2', 'CFHR4', 'TMEM132D', 'KCNJ16', 'USP50', 'TSPEAR-AS2', 'UGT1A4', 'PLA2G12B', 'TRIM55', 'NEUROG1', 'SSTR3', 'C11ORF87', 'SNORA72', 'DISC2', 'SERPINB11', 'NEUROD6', 'PRAMEF16', 'LINC01591', 'SNORA2B', 'PRSS48', 'GSC2', 'SNORA27', 'VWA5B1', 'OR51F1', 'OR10AD1', 'SCGB3A2', 'FERD3L', 'LINC00691', 'GABRR3', 'NKX6-2', 'RAPGEF4-AS1', 'ADRB3', 'GAGE12J', 'FAM47C', 'OR51L1', 'POM121L2', 'OR5H2', 'KRTAP12-1', 'C17ORF64', 'COX7B2', 'IFNW1', 'HIST1H3A', 'ANKRD20A20P', 'SLC10A1', 'LINC00032', 'GSTA5', 'KRTAP9-2', 'OR4D10', 'APCS', 'CGB2', 'OR5B17', 'AADAC', 'IFNL1', 'ZSCAN10', 'MMD2', 'FER1L6', 'UTS2R', 'OR51T1', 'LINC00452', 'MCF2', 'ART1', 'C12ORF56', 'OR52K2', 'MAGEA5', 'PATE3', 'CYP2C18', 'BAGE', 'PRDM9', 'GCGR', 'APOA5', 'PACRG-AS1', 'OLIG3', 'SNORD15B', 'SPINK14', 'B3GALT1', 'REG1B', 'CST9L', 'OR2A12', 'INS-IGF2', 'ISL1', 'DACH2', 'OTOP1', 'MT1B', 'GPR52', 'PDX1', 'TRIM49', 'NPSR1-AS1', 'CNTNAP5', 'OR4D5', 'FOXG1', 'NPHS2', 'EPGN', 'HAND1', 'LOC100130417', 'OR4N4', 'MYADML', 'PRSS57', 'MUC13', 'CLRN1', 'LINC00052', 'FAM138B', 'TRIM75P', 'HBM', 'PPBPP1', 'HRK', 'NHLH2', 'TAS2R42', 'NEUROG3', 'EXD1', 'OR13H1', 'IGFBP1', 'OR5K1', 'MMP21', 'PSKH2', 'OR10G8', 'ACSM2A', 'SYT10', 'CPNE6', 'COL20A1', 'MAGEA11', 'MAS1L', 'MBL2', 'PSG4', 'SSX5', 'ALAS2', 'LINC00202-2', 'ADCYAP1R1', 'SPINT3', 'HYMAI', 'CLEC4M', 'OR3A2', 'NPSR1', 'OPRM1', 'PPAN-P2RY11', 'NYAP2', 'TNP2', 'SLITRK1', 'CCER1', 'HIST2H2AB', 'VCX3A', 'PWAR4', 'SFTPB', 'PASD1', 'SHD', 'SLCO4A1-AS1', 'POU4F2', 'CALHM3', 'KRTAP10-6', 'GPHA2', 'C4ORF50', 'LHCGR', 'ADGRG7', 'OR2T2', 'PNLIPRP1', 'LINC01565', 'NBPF22P', 'TMEM202', 'TNFSF18', 'CACNG3', 'OR2K2', 'OTC', 'SCARNA14', 'RNF151', 'LOC392196', 'IFNL2', 'ARL14', 'SNORD115-26', 'H3F3AP5', 'IQCF2', 'NXNL1', 'CYP1A2', 'F2', 'SALL3', 'LOC285629', 'FOXR1', 'NMUR2', 'SNORA68', 'AWAT1', 'SDC4P', 'SNORA16A', 'SCTR', 'KCNB2', 'AMER3', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.2298394833254668e-15 NRMSE: 7.857294714643735e-16 MAPE: 5.391409361443652e-12 Pearson Correlation: 0.08271809191822943 Spearman Correlation: 0.009404107283133206 Coefficient of Determination: -2.1863277257888796 RMSE: 0.40877489373344617 NRMSE: 0.25780454952916637 MAPE: 1421.8677096251156 Predictor: ElasticNet Pearson Correlation: 0.7261557038066769 Spearman Correlation: 0.7045209009120157 Coefficient of Determination: 0.45266621941243024 RMSE: 0.17778406378610784 NRMSE: 0.11358407366766833 MAPE: 486.5697659381551 Pearson Correlation: 0.5227763459566696 Spearman Correlation: 0.4164914774498435 Coefficient of Determination: 0.22571168947498332 RMSE: 0.20150709605523698 NRMSE: 0.12708570639205158 MAPE: 423.0572280162295 Predictor: RandomForests Pearson Correlation: 0.5529415303776437 Spearman Correlation: 0.5568717441872427 Coefficient of Determination: 0.25231336517212233 RMSE: 0.20779089389451688 NRMSE: 0.13275507206304346 MAPE: 494.38861023361846 Pearson Correlation: 0.49567746643334315 Spearman Correlation: 0.46328009077419924 Coefficient of Determination: 0.21008296638802826 RMSE: 0.20353060919328259 NRMSE: 0.1283618877354204 MAPE: 482.38304991674823 Protein: ERBB2 x_train_column_count: 1003 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'DEFB109P1', 'OR8J3', 'TXLNGY', 'OR52B4', 'IFNA16', 'LINC00111', 'SNORA20', 'RAB9BP1', 'DAZL', 'OR5AN1', 'OR2T34', 'F13B', 'KRTAP19-8', 'OR11L1', 'LGALS14', 'SST', 'HBG1', 'OR2M3', 'SNORD15A', 'OTX2', 'FAM183CP', 'CLEC6A', 'OR10V1', 'NXF2B', 'TMPRSS11F', 'GPR151', 'OR8S1', 'OR2M7', 'OR5H14', 'PRM3', 'MS4A6E', 'OR8G5', 'DNAJB8', 'OR2G2', 'FGF23', 'MBD3L5', 'SCGB1C1', 'OR8B3', 'OR10A5', 'WFDC5', 'TCP10L2', 'TMEM252', 'ACOT12', 'LOC145845', 'PRSS3P2', 'PPY', 'MAGEB10', 'LINC01205', 'TAAR9', 'TSGA13', 'PLA2G2F', 'PSAPL1', 'SUN3', 'PSG7', 'CRYAA', 'USP26', 'SPRR1B', 'TTTY14', 'KRTAP10-12', 'OR1S2', 'OR2AG1', 'PRAMEF8', 'HIST1H4F', 'NPPC', 'SNORD89', 'MC2R', 'C1ORF87', 'NOX3', 'C20ORF173', 'LEUTX', 'SFTA3', 'FOXN3-AS2', 'XAGE5', 'LOC391003', 'VWC2L', 'LINC00636', 'SDR16C6P', 'FAM169B', 'LOC391343', 'ACTRT2', 'RPL13AP17', 'SLC5A7', 'ALOX12B', 'CAPZA3', 'KRTAP19-1', 'OR4S1', 'BMP10', 'OR5B2', 'TTTY15', 'OPN1MW', 'RTP2', 'SLC38A8', 'C10ORF53', 'OR4D9', 'FMR1NB', 'P2RX3', 'ARHGAP36', 'ARR3', 'CCKBR', 'SNORA70B', 'STATH', 'CASC8', 'TBC1D28', 'C11ORF94', 'KRT39', 'OR1N1', 'C1ORF94', 'SNORA34', 'TAS2R60', 'ACTR3BP2', 'SSX8', 'HNRNPCL1', 'IFITM5', 'ANKRD18DP', 'PF4', 'BEND2', 'GAGE1', 'PROKR1', 'EDDM3A', 'CABS1', 'BPIFA3', 'KHDC1L', 'LINC00029', 'MMP23A', 'DEFB129', 'OR4C16', 'AKAP14', 'CYP11B2', 'HBD', 'OR10S1', 'LINC00114', 'PRSS1', 'DEFB104A', 'HSFY2', 'CABP5', 'CYP2W1', 'CYP3A4', 'SFTPC', 'CGB5', 'CCL15-CCL14', 'DMRT1', 'RGS8', 'PROP1', 'TKTL2', 'SERPINB4', 'CLRN2', 'KCNQ1DN', 'PRAP1', 'LINC00469', 'YWHAEP7', 'SNORA51', 'KRTAP25-1', 'DUXA', 'SNORA32', 'OR4F5', 'XKR7', 'OTP', 'SNORA54', 'SLC13A1', 'LHX9', 'SVOP', 'LGI3', 'KRTAP6-1', 'PAGE2', 'LOC646813', 'MYBPHL', 'OR6Y1', 'OR4K17', 'KRTAP19-2', 'TAS2R13', 'GAGE2D', 'OR7A17', 'OR2T35', 'FBP2', 'SPACA7', 'KRTAP19-3', 'ANKUB1', 'LOC285627', 'PLET1', 'GABRG3', 'INS', 'AVPR1B', 'PRAMEF20', 'OR4K2', 'NEU2', 'MGC27382', 'FCAMR', 'TCP10', 'LCNL1', 'CRLF2', 'LINC01101', 'OTOL1', 'DNTT', 'FDCSP', 'KRT85', 'FAM71C', 'C3ORF49', 'ZFAT-AS1', 'FOXE1', 'OR6B3', 'LINC00113', 'HPD', 'C9ORF135', 'IFNA13', 'KRTAP4-5', 'OR10H2', 'IZUMO1R', 'OLIG1', 'OR1L3', 'OR8H2', 'PRDM14', 'FGF6', 'XAGE3', 'SCARNA20', 'DAW1', 'GH1', 'TCEB3C', 'CCDC166', 'TMEM207', 'UGT2A3', 'PTF1A', 'SPANXN1', 'FAM27L', 'OR14I1', 'OR8G2', 'OR1L1', 'OLAH', 'PSG11', 'DEFB108B', 'DEFA4', 'ALPPL2', 'CYLC2', 'PRKAG3', 'SNORA47', 'SPATA19', 'IL26', 'FGA', 'PRG1', 'OR51I2', 'CER1', 'LINC00923', 'BARHL2', 'KRTAP10-1', 'C17ORF78', 'SLC25A31', 'SULT1C3', 'IVL', 'NANOS2', 'LCN9', 'HBBP1', 'LCE1D', 'PYDC2', 'TFF2', 'NKX2-1', 'ZNF479', 'PISRT1', 'OR5H6', 'GYS2', 'GUCY2EP', 'FTMT', 'LINC00696', 'DEFB110', 'OPRD1', 'OR4D6', 'MYBPC2', 'EPS8L3', 'LPO', 'TARM1', 'OR7E24', 'SCGB1A1', 'UCMA', 'HOXC12', 'SCN1A', 'ENAM', 'FMO6P', 'OR1E2', 'GAGE2B', 'CPLX3', 'OR14C36', 'OR6B2', 'OR1B1', 'LOC729609', 'CLCA4', 'OR6M1', 'RESP18', 'MAGEA9B', 'ST8SIA3', 'OR1K1', 'TTTY9B', 'CYP7A1', 'GBX2', 'PRAMEF1', 'SCARNA11', 'SBSN', 'HBZ', 'HBG2', 'GPR78', 'OR4C12', 'SERPINI2', 'FRMPD2B', 'ZNF679', 'SNORA59B', 'TTTY8', 'HAO1', 'LINC00326', 'SPATA31A3', 'FAM27B', 'KRTAP21-1', 'SLC1A6', 'LINC00488', 'HTR3E', 'SLITRK3', 'OR4M2', 'MAGEB6', 'OR2M4', 'C12ORF50', 'KRTAP19-6', 'LYZL1', 'ADGRD2', 'YIPF7', 'GPRC6A', 'OR12D2', 'CCL24', 'SYCN', 'SNAR-F', 'CGB8', 'LINC00608', 'NYX', 'ANP32D', 'ASB10', 'LOC286238', 'ANGPTL3', 'TMEM88B', 'ALX4', 'ALLC', 'OR6F1', 'SNORD94', 'OC90', 'CD200R1L', 'SNORA38B', 'OR6C74', 'LMNTD1', 'OR51G2', 'GPR148', 'FAM71B', 'DPPA2', 'BRINP3', 'OR6A2', 'SLC51B', 'OR6K6', 'DYDC1', 'OR51F2', 'POU6F2', 'GDPD2', 'DKFZP434K028', 'ADGRG4', 'FFAR1', 'MAP3K15', 'KRT13', 'KRTAP2-1', 'CNBD1', 'SRY', 'NTS', 'LINC00575', 'RAX2', 'LINC00934', 'SERPINB3', 'BET1P1', 'C10ORF120', 'MOGAT3', 'SPACA3', 'IL17F', 'IL36RN', 'ARID3C', 'OR11H4', 'SLC6A5', 'CNTN5', 'TRHR', 'SNORA37', 'TSKS', 'SNORA16B', 'LOC284798', 'OR13C3', 'KCNK4', 'TCERG1L', 'GUCA2B', 'LINC00304', 'OR2A14', 'KRT25', 'KCNMB2', 'SLC2A2', 'MYH1', 'IFNA7', 'LINC00410', 'APOC3', 'TMEM179', 'HBE1', 'BMP15', 'OR2L8', 'SLC22A12', 'SNORA71A', 'KIR3DL3', 'GAGE12F', 'LINC01312', 'PRB4', 'MUSK', 'SPRR2E', 'FAM25BP', 'NLRP8', 'OR2A2', 'SPATA31C1', 'ITIH1', 'SEC14L3', 'NKAIN3', 'RPS4Y2', 'SNORA74A', 'LINC00710', 'LINC00928', 'SNORA76C', 'ZNF705A', 'DCT', 'OR2AT4', 'FAM170B', 'GPR22', 'TDRG1', 'SLC17A6', 'OR56B1', 'MAGEB3', 'PAPOLB', 'MAGEA1', 'TNP1', 'LOC100130264', 'OR11H6', 'HTR1A', 'SSX6', 'LRRC30', 'USH1C', 'CSN3', 'OR10W1', 'PROKR2', 'SPANXN3', 'USP9Y', 'CFHR2', 'SOX3', 'CTRC', 'GDNF', 'EDDM3B', 'KCNIP4-IT1', 'EPPIN', 'GKN2', 'PAGE5', 'MUC2', 'GCSAML-AS1', 'DMRTC1', 'BTN1A1', 'FAM205A', 'OR51B5', 'BCYRN1', 'DMP1', 'PPY2P', 'SCP2D1', 'ZCCHC13', 'SCARNA8', 'CHRNB3', 'LOC647859', 'HPVC1', 'SPOCK3', 'HMHB1', 'OCSTAMP', 'SPZ1', 'CRYGC', 'BPIFB3', 'ADAM29', 'ACER1', 'MAGEA12', 'PTH2', 'KRTAP4-3', 'ZFY', 'BPIFB4', 'LINC00479', 'ANKRD34C', 'GAGE2C', 'SLC32A1', 'NXPE1', 'CCKAR', 'KRTAP1-1', 'KRTAP1-5', 'TRIM48', 'ZAR1L', 'ASB15', 'FAM19A4', 'OR2T10', 'MS4A10', 'NUTM1', 'TMEM14E', 'VRTN', 'C4ORF51', 'KRT83', 'OR4F21', 'C6ORF10', 'KRT71', 'KRT3', 'C2ORF27B', 'KRTAP11-1', 'DAOA', 'KLRC4', 'HMSD', 'SOX1', 'LOC644669', 'AATK-AS1', 'ODF3', 'SPATA3', 'MMP20', 'CT47A1', 'ATOH7', 'AVP', 'AIRE', 'TPTE', 'CLEC4G', 'LINC01142', 'KCNU1', 'BTF3P11', 'FOXD4L3', 'MTVR2', 'OR2G6', 'PPP1R2P9', 'AADACL3', 'SSX9', 'RFX6', 'OR6S1', 'AFM', 'AKR1D1', 'LRRC52', 'C1ORF146', 'ZNF735', 'LOC400940', 'OACYLP', 'EPB42', 'TBR1', 'ASAP1-IT1', 'PCP4', 'B3GNT6', 'FAM170A', 'SLC22A10', 'GFI1B', 'MTNR1B', 'BTNL3', 'GNAS-AS1', 'MYH16', 'CPA2', 'LINC00303', 'IGLL1', 'HCRTR1', 'CNGA2', 'CA4', 'SH2D7', 'INSM2', 'CA6', 'CLCA1', 'HULC', 'CACNG7', 'PRR32', 'PRL', 'NF1P2', 'ZIM3', 'HYALP1', 'CT47A11', 'KRTAP3-2', 'CFHR4', 'TMEM132D', 'KCNJ16', 'USP50', 'TSPEAR-AS2', 'UGT1A4', 'PLA2G12B', 'TRIM55', 'NEUROG1', 'SSTR3', 'C11ORF87', 'SNORA72', 'DISC2', 'SERPINB11', 'NEUROD6', 'PRAMEF16', 'LINC01591', 'SNORA2B', 'PRSS48', 'GSC2', 'SNORA27', 'VWA5B1', 'OR51F1', 'OR10AD1', 'SCGB3A2', 'FERD3L', 'LINC00691', 'GABRR3', 'NKX6-2', 'RAPGEF4-AS1', 'ADRB3', 'GAGE12J', 'FAM47C', 'OR51L1', 'POM121L2', 'OR5H2', 'KRTAP12-1', 'C17ORF64', 'COX7B2', 'IFNW1', 'HIST1H3A', 'ANKRD20A20P', 'SLC10A1', 'LINC00032', 'GSTA5', 'KRTAP9-2', 'OR4D10', 'APCS', 'CGB2', 'OR5B17', 'AADAC', 'IFNL1', 'ZSCAN10', 'MMD2', 'FER1L6', 'UTS2R', 'OR51T1', 'LINC00452', 'MCF2', 'ART1', 'C12ORF56', 'OR52K2', 'MAGEA5', 'PATE3', 'CYP2C18', 'BAGE', 'PRDM9', 'GCGR', 'APOA5', 'PACRG-AS1', 'OLIG3', 'SNORD15B', 'SPINK14', 'B3GALT1', 'REG1B', 'CST9L', 'OR2A12', 'INS-IGF2', 'ISL1', 'DACH2', 'OTOP1', 'MT1B', 'GPR52', 'PDX1', 'TRIM49', 'NPSR1-AS1', 'CNTNAP5', 'OR4D5', 'FOXG1', 'NPHS2', 'EPGN', 'HAND1', 'LOC100130417', 'OR4N4', 'MYADML', 'PRSS57', 'MUC13', 'CLRN1', 'LINC00052', 'FAM138B', 'TRIM75P', 'HBM', 'PPBPP1', 'HRK', 'NHLH2', 'TAS2R42', 'NEUROG3', 'EXD1', 'OR13H1', 'IGFBP1', 'OR5K1', 'MMP21', 'PSKH2', 'OR10G8', 'ACSM2A', 'SYT10', 'CPNE6', 'COL20A1', 'MAGEA11', 'MAS1L', 'MBL2', 'PSG4', 'SSX5', 'ALAS2', 'LINC00202-2', 'ADCYAP1R1', 'SPINT3', 'HYMAI', 'CLEC4M', 'OR3A2', 'NPSR1', 'OPRM1', 'PPAN-P2RY11', 'NYAP2', 'TNP2', 'SLITRK1', 'CCER1', 'HIST2H2AB', 'VCX3A', 'PWAR4', 'SFTPB', 'PASD1', 'SHD', 'SLCO4A1-AS1', 'POU4F2', 'CALHM3', 'KRTAP10-6', 'GPHA2', 'C4ORF50', 'LHCGR', 'ADGRG7', 'OR2T2', 'PNLIPRP1', 'LINC01565', 'NBPF22P', 'TMEM202', 'TNFSF18', 'CACNG3', 'OR2K2', 'OTC', 'SCARNA14', 'RNF151', 'LOC392196', 'IFNL2', 'ARL14', 'SNORD115-26', 'H3F3AP5', 'IQCF2', 'NXNL1', 'CYP1A2', 'F2', 'SALL3', 'LOC285629', 'FOXR1', 'NMUR2', 'SNORA68', 'AWAT1', 'SDC4P', 'SNORA16A', 'SCTR', 'KCNB2', 'AMER3', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.773827017489739e-15 NRMSE: 6.4293354302430085e-16 MAPE: 4.299997762631103e-12 Pearson Correlation: 0.5196718772201857 Spearman Correlation: 0.32884490934439875 Coefficient of Determination: -0.09101484353634337 RMSE: 1.0828148475786339 NRMSE: 0.19498232570652824 MAPE: 564.1095467036986 Predictor: ElasticNet Pearson Correlation: 0.9545690604908547 Spearman Correlation: 0.9050496220377862 Coefficient of Determination: 0.8961360399775272 RMSE: 0.3160996047322097 NRMSE: 0.05385277011298869 MAPE: 399.6091612858356 Pearson Correlation: 0.7454517251358789 Spearman Correlation: 0.5211941809679745 Coefficient of Determination: 0.5365327188865652 RMSE: 0.7057459793056204 NRMSE: 0.12708358470587755 MAPE: 275.2478741565553 Predictor: RandomForests Pearson Correlation: 0.8443436216962033 Spearman Correlation: 0.6247733581620195 Coefficient of Determination: 0.7106773208164303 RMSE: 0.5275732333975279 NRMSE: 0.089880783242334 MAPE: 437.7825154418806 Pearson Correlation: 0.7823179239042917 Spearman Correlation: 0.6564531612818875 Coefficient of Determination: 0.5590517351315569 RMSE: 0.6883870496632674 NRMSE: 0.12395776455203432 MAPE: 218.5287458751925 Protein: ERBB3 x_train_column_count: 1003 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'IL1F10', 'KRTAP4-12', 'GABRA4', 'BCORP1', 'OR2W1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'ADAD1', 'OR4K1', 'RAG2', 'LCE5A', 'OR8K3', 'CTSL3P', 'MS4A5', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'FGF22', 'DEFB127', 'MRGPRG-AS1', 'SMCP', 'MROH5', 'FAM150A', 'OR52A1', 'REXO1L6P', 'SNORA36A', 'CHAT', 'FAM92A1P2', 'LHX3', 'HNF1B', 'CTXN3', 'OR7G3', 'CT47A2', 'HES3', 'SLC18A3', 'TBC1D21', 'AMBN', 'FAM41AY1', 'DEFB113', 'SNAR-E', 'SNAR-I', 'OR8I2', 'C11ORF40', 'SNORA58', 'BSX', 'FLG2', 'OR51A2', 'GJA10', 'TMPRSS11B', 'NR0B1', 'CSN2', 'SMR3B', 'DEFB119', 'SNORD8', 'HHLA1', 'GJA8', 'TAAR8', 'BARHL1', 'GUCA1C', 'SNAR-A13', 'LINC01548', 'SPRR2G', 'ATP4B', 'GSX2', 'LCE1F', 'C17ORF102', 'TTTY21', 'LRTM1', 'LELP1', 'LCE2A', 'CT47B1', 'SNORA5B', 'GYPA', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CPN1', 'CCDC38', 'TYR', 'SLC28A2', 'KRTAP4-11', 'CLC', 'PROL1', 'CEACAM20', 'FAM224B', 'IL37', 'ESX1', 'OR8U1', 'FXYD4', 'PSMB11', 'ZNF536', 'ASB18', 'TMEM247', 'GNAT3', 'CA5A', 'SPANXN4', 'OR8D4', 'ZNF804B', 'OR2B3', 'ZNRF4', 'ANXA8L1', 'OR7C2', 'OR7G1', 'OR13C9', 'FNDC7', 'OR2T12', 'OR7G2', 'C12ORF40', 'CT47A6', 'OR6C76', 'OR5K3', 'CT47A7', 'GLRA4', 'LINC00671', 'OR8H1', 'PAQR9', 'H1FOO', 'KRTAP6-2', 'OR2AE1', 'PGM5-AS1', 'OR8A1', 'SNORA55', 'OR2M2', 'MAGEA10', 'APOA2', 'HAO2', 'TSPYL6', 'SPIC', 'CD300LD', 'KRT78', 'DMBT1P1', 'OR6T1', 'DPRX', 'OLIG2', 'DEFB128', 'SNORD115-7', 'OR6C4', 'AHSP', 'EIF1AY', 'PLCZ1', 'LINC00314', 'DUSP21', 'OR4S2', 'TEX36-AS1', 'GABRA6', 'SLC6A19', 'CST13P', 'FGF4', 'LOC440040', 'CD5L', 'CDKL4', 'IFNA21', 'OR52A4P', 'KRTAP1-3', 'OR2C3', 'PSG8', 'LOC100129935', 'LYPD8', 'HTR3B', 'TMEM196', 'PSG1', 'OR4A47', 'OR4B1', 'ZPBP', 'RSPH6A', 'KRTDAP', 'OR6B1', 'DDI1', 'OR10G4', 'GNAT1', 'BRDTP1', 'MOS', 'ITLN2', 'GOT1L1', 'OR4A16', 'PLSCR5', 'SCARNA22', 'KRTAP10-11', 'ASB11', 'IL13', 'SOST', 'SPRR4', 'RNASE8', 'OR6C2', 'PRB1', 'SNORA24', 'KRT2', 'DNMT3L', 'SCARNA4', 'OR52A5', 'KRTAP19-5', 'C1ORF105', 'SLC25A3P1', 'PWRN2', 'KRTAP21-2', 'GJD2', 'TAGLN3', 'VSTM2B', 'SNORA22', 'ARG1', 'SNORA28', 'LILRP2', 'MORC1', 'TEX13B', 'LRRC7', 'KRTAP10-7', 'GPR50', 'GABRA1', 'LINC00207', 'OR52H1', 'IGFL4', 'OR1M1', 'IL31', 'SLCO1A2', 'NMS', 'FLJ25758', 'FAM71A', 'OR5H1', 'TFAMP1', 'LINC01020', 'GHSR', 'OR5T2', 'OR2L2', 'ASB17', 'NCOR1P1', 'PRAMEF5', 'H1FNT', 'MRGPRX1', 'TMIGD1', 'URAD', 'OR4D11', 'KRTAP12-2', 'CIB4', 'KRTAP12-3', 'HIST1H4G', 'SNORD116-19', 'SNORA69', 'DEFB109P1', 'OR8J3', 'TXLNGY', 'OR52B4', 'IFNA16', 'LINC00111', 'SNORA20', 'RAB9BP1', 'DAZL', 'OR5AN1', 'OR2T34', 'F13B', 'KRTAP19-8', 'OR11L1', 'LGALS14', 'SST', 'HBG1', 'OR2M3', 'SNORD15A', 'OTX2', 'FAM183CP', 'CLEC6A', 'OR10V1', 'NXF2B', 'TMPRSS11F', 'GPR151', 'OR8S1', 'OR2M7', 'OR5H14', 'PRM3', 'MS4A6E', 'OR8G5', 'DNAJB8', 'OR2G2', 'FGF23', 'MBD3L5', 'SCGB1C1', 'OR8B3', 'OR10A5', 'WFDC5', 'TCP10L2', 'TMEM252', 'ACOT12', 'LOC145845', 'PRSS3P2', 'PPY', 'MAGEB10', 'LINC01205', 'TAAR9', 'TSGA13', 'PLA2G2F', 'PSAPL1', 'SUN3', 'PSG7', 'CRYAA', 'USP26', 'SPRR1B', 'TTTY14', 'KRTAP10-12', 'OR1S2', 'OR2AG1', 'PRAMEF8', 'HIST1H4F', 'NPPC', 'SNORD89', 'MC2R', 'C1ORF87', 'NOX3', 'C20ORF173', 'LEUTX', 'SFTA3', 'FOXN3-AS2', 'XAGE5', 'LOC391003', 'VWC2L', 'LINC00636', 'SDR16C6P', 'FAM169B', 'LOC391343', 'ACTRT2', 'RPL13AP17', 'SLC5A7', 'ALOX12B', 'CAPZA3', 'KRTAP19-1', 'OR4S1', 'BMP10', 'OR5B2', 'TTTY15', 'OPN1MW', 'RTP2', 'SLC38A8', 'C10ORF53', 'OR4D9', 'FMR1NB', 'P2RX3', 'ARHGAP36', 'ARR3', 'CCKBR', 'SNORA70B', 'STATH', 'CASC8', 'TBC1D28', 'C11ORF94', 'KRT39', 'OR1N1', 'C1ORF94', 'SNORA34', 'TAS2R60', 'ACTR3BP2', 'SSX8', 'HNRNPCL1', 'IFITM5', 'ANKRD18DP', 'PF4', 'BEND2', 'GAGE1', 'PROKR1', 'EDDM3A', 'CABS1', 'BPIFA3', 'KHDC1L', 'LINC00029', 'MMP23A', 'DEFB129', 'OR4C16', 'AKAP14', 'CYP11B2', 'HBD', 'OR10S1', 'LINC00114', 'PRSS1', 'DEFB104A', 'HSFY2', 'CABP5', 'CYP2W1', 'CYP3A4', 'SFTPC', 'CGB5', 'CCL15-CCL14', 'DMRT1', 'RGS8', 'PROP1', 'TKTL2', 'SERPINB4', 'CLRN2', 'KCNQ1DN', 'PRAP1', 'LINC00469', 'YWHAEP7', 'SNORA51', 'KRTAP25-1', 'DUXA', 'SNORA32', 'OR4F5', 'XKR7', 'OTP', 'SNORA54', 'SLC13A1', 'LHX9', 'SVOP', 'LGI3', 'KRTAP6-1', 'PAGE2', 'LOC646813', 'MYBPHL', 'OR6Y1', 'OR4K17', 'KRTAP19-2', 'TAS2R13', 'GAGE2D', 'OR7A17', 'OR2T35', 'FBP2', 'SPACA7', 'KRTAP19-3', 'ANKUB1', 'LOC285627', 'PLET1', 'GABRG3', 'INS', 'AVPR1B', 'PRAMEF20', 'OR4K2', 'NEU2', 'MGC27382', 'FCAMR', 'TCP10', 'LCNL1', 'CRLF2', 'LINC01101', 'OTOL1', 'DNTT', 'FDCSP', 'KRT85', 'FAM71C', 'C3ORF49', 'ZFAT-AS1', 'FOXE1', 'OR6B3', 'LINC00113', 'HPD', 'C9ORF135', 'IFNA13', 'KRTAP4-5', 'OR10H2', 'IZUMO1R', 'OLIG1', 'OR1L3', 'OR8H2', 'PRDM14', 'FGF6', 'XAGE3', 'SCARNA20', 'DAW1', 'GH1', 'TCEB3C', 'CCDC166', 'TMEM207', 'UGT2A3', 'PTF1A', 'SPANXN1', 'FAM27L', 'OR14I1', 'OR8G2', 'OR1L1', 'OLAH', 'PSG11', 'DEFB108B', 'DEFA4', 'ALPPL2', 'CYLC2', 'PRKAG3', 'SNORA47', 'SPATA19', 'IL26', 'FGA', 'PRG1', 'OR51I2', 'CER1', 'LINC00923', 'BARHL2', 'KRTAP10-1', 'C17ORF78', 'SLC25A31', 'SULT1C3', 'IVL', 'NANOS2', 'LCN9', 'HBBP1', 'LCE1D', 'PYDC2', 'TFF2', 'NKX2-1', 'ZNF479', 'PISRT1', 'OR5H6', 'GYS2', 'GUCY2EP', 'FTMT', 'LINC00696', 'DEFB110', 'OPRD1', 'OR4D6', 'MYBPC2', 'EPS8L3', 'LPO', 'TARM1', 'OR7E24', 'SCGB1A1', 'UCMA', 'HOXC12', 'SCN1A', 'ENAM', 'FMO6P', 'OR1E2', 'GAGE2B', 'CPLX3', 'OR14C36', 'OR6B2', 'OR1B1', 'LOC729609', 'CLCA4', 'OR6M1', 'RESP18', 'MAGEA9B', 'ST8SIA3', 'OR1K1', 'TTTY9B', 'CYP7A1', 'GBX2', 'PRAMEF1', 'SCARNA11', 'SBSN', 'HBZ', 'HBG2', 'GPR78', 'OR4C12', 'SERPINI2', 'FRMPD2B', 'ZNF679', 'SNORA59B', 'TTTY8', 'HAO1', 'LINC00326', 'SPATA31A3', 'FAM27B', 'KRTAP21-1', 'SLC1A6', 'LINC00488', 'HTR3E', 'SLITRK3', 'OR4M2', 'MAGEB6', 'OR2M4', 'C12ORF50', 'KRTAP19-6', 'LYZL1', 'ADGRD2', 'YIPF7', 'GPRC6A', 'OR12D2', 'CCL24', 'SYCN', 'SNAR-F', 'CGB8', 'LINC00608', 'NYX', 'ANP32D', 'ASB10', 'LOC286238', 'ANGPTL3', 'TMEM88B', 'ALX4', 'ALLC', 'OR6F1', 'SNORD94', 'OC90', 'CD200R1L', 'SNORA38B', 'OR6C74', 'LMNTD1', 'OR51G2', 'GPR148', 'FAM71B', 'DPPA2', 'BRINP3', 'OR6A2', 'SLC51B', 'OR6K6', 'DYDC1', 'OR51F2', 'POU6F2', 'GDPD2', 'DKFZP434K028', 'ADGRG4', 'FFAR1', 'MAP3K15', 'KRT13', 'KRTAP2-1', 'CNBD1', 'SRY', 'NTS', 'LINC00575', 'RAX2', 'LINC00934', 'SERPINB3', 'BET1P1', 'C10ORF120', 'MOGAT3', 'SPACA3', 'IL17F', 'IL36RN', 'ARID3C', 'OR11H4', 'SLC6A5', 'CNTN5', 'TRHR', 'SNORA37', 'TSKS', 'SNORA16B', 'LOC284798', 'OR13C3', 'KCNK4', 'TCERG1L', 'GUCA2B', 'LINC00304', 'OR2A14', 'KRT25', 'KCNMB2', 'SLC2A2', 'MYH1', 'IFNA7', 'LINC00410', 'APOC3', 'TMEM179', 'HBE1', 'BMP15', 'OR2L8', 'SLC22A12', 'SNORA71A', 'KIR3DL3', 'GAGE12F', 'LINC01312', 'PRB4', 'MUSK', 'SPRR2E', 'FAM25BP', 'NLRP8', 'OR2A2', 'SPATA31C1', 'ITIH1', 'SEC14L3', 'NKAIN3', 'RPS4Y2', 'SNORA74A', 'LINC00710', 'LINC00928', 'SNORA76C', 'ZNF705A', 'DCT', 'OR2AT4', 'FAM170B', 'GPR22', 'TDRG1', 'SLC17A6', 'OR56B1', 'MAGEB3', 'PAPOLB', 'MAGEA1', 'TNP1', 'LOC100130264', 'OR11H6', 'HTR1A', 'SSX6', 'LRRC30', 'USH1C', 'CSN3', 'OR10W1', 'PROKR2', 'SPANXN3', 'USP9Y', 'CFHR2', 'SOX3', 'CTRC', 'GDNF', 'EDDM3B', 'KCNIP4-IT1', 'EPPIN', 'GKN2', 'PAGE5', 'MUC2', 'GCSAML-AS1', 'DMRTC1', 'BTN1A1', 'FAM205A', 'OR51B5', 'BCYRN1', 'DMP1', 'PPY2P', 'SCP2D1', 'ZCCHC13', 'SCARNA8', 'CHRNB3', 'LOC647859', 'HPVC1', 'SPOCK3', 'HMHB1', 'OCSTAMP', 'SPZ1', 'CRYGC', 'BPIFB3', 'ADAM29', 'ACER1', 'MAGEA12', 'PTH2', 'KRTAP4-3', 'ZFY', 'BPIFB4', 'LINC00479', 'ANKRD34C', 'GAGE2C', 'SLC32A1', 'NXPE1', 'CCKAR', 'KRTAP1-1', 'KRTAP1-5', 'TRIM48', 'ZAR1L', 'ASB15', 'FAM19A4', 'OR2T10', 'MS4A10', 'NUTM1', 'TMEM14E', 'VRTN', 'C4ORF51', 'KRT83', 'OR4F21', 'C6ORF10', 'KRT71', 'KRT3', 'C2ORF27B', 'KRTAP11-1', 'DAOA', 'KLRC4', 'HMSD', 'SOX1', 'LOC644669', 'AATK-AS1', 'ODF3', 'SPATA3', 'MMP20', 'CT47A1', 'ATOH7', 'AVP', 'AIRE', 'TPTE', 'CLEC4G', 'LINC01142', 'KCNU1', 'BTF3P11', 'FOXD4L3', 'MTVR2', 'OR2G6', 'PPP1R2P9', 'AADACL3', 'SSX9', 'RFX6', 'OR6S1', 'AFM', 'AKR1D1', 'LRRC52', 'C1ORF146', 'ZNF735', 'LOC400940', 'OACYLP', 'EPB42', 'TBR1', 'ASAP1-IT1', 'PCP4', 'B3GNT6', 'FAM170A', 'SLC22A10', 'GFI1B', 'MTNR1B', 'BTNL3', 'GNAS-AS1', 'MYH16', 'CPA2', 'LINC00303', 'IGLL1', 'HCRTR1', 'CNGA2', 'CA4', 'SH2D7', 'INSM2', 'CA6', 'CLCA1', 'HULC', 'CACNG7', 'PRR32', 'PRL', 'NF1P2', 'ZIM3', 'HYALP1', 'CT47A11', 'KRTAP3-2', 'CFHR4', 'TMEM132D', 'KCNJ16', 'USP50', 'TSPEAR-AS2', 'UGT1A4', 'PLA2G12B', 'TRIM55', 'NEUROG1', 'SSTR3', 'C11ORF87', 'SNORA72', 'DISC2', 'SERPINB11', 'NEUROD6', 'PRAMEF16', 'LINC01591', 'SNORA2B', 'PRSS48', 'GSC2', 'SNORA27', 'VWA5B1', 'OR51F1', 'OR10AD1', 'SCGB3A2', 'FERD3L', 'LINC00691', 'GABRR3', 'NKX6-2', 'RAPGEF4-AS1', 'ADRB3', 'GAGE12J', 'FAM47C', 'OR51L1', 'POM121L2', 'OR5H2', 'KRTAP12-1', 'C17ORF64', 'COX7B2', 'IFNW1', 'HIST1H3A', 'ANKRD20A20P', 'SLC10A1', 'LINC00032', 'GSTA5', 'KRTAP9-2', 'OR4D10', 'APCS', 'CGB2', 'OR5B17', 'AADAC', 'IFNL1', 'ZSCAN10', 'MMD2', 'FER1L6', 'UTS2R', 'OR51T1', 'LINC00452', 'MCF2', 'ART1', 'C12ORF56', 'OR52K2', 'MAGEA5', 'PATE3', 'CYP2C18', 'BAGE', 'PRDM9', 'GCGR', 'APOA5', 'PACRG-AS1', 'OLIG3', 'SNORD15B', 'SPINK14', 'B3GALT1', 'REG1B', 'CST9L', 'OR2A12', 'INS-IGF2', 'ISL1', 'DACH2', 'OTOP1', 'MT1B', 'GPR52', 'PDX1', 'TRIM49', 'NPSR1-AS1', 'CNTNAP5', 'OR4D5', 'FOXG1', 'NPHS2', 'EPGN', 'HAND1', 'LOC100130417', 'OR4N4', 'MYADML', 'PRSS57', 'MUC13', 'CLRN1', 'LINC00052', 'FAM138B', 'TRIM75P', 'HBM', 'PPBPP1', 'HRK', 'NHLH2', 'TAS2R42', 'NEUROG3', 'EXD1', 'OR13H1', 'IGFBP1', 'OR5K1', 'MMP21', 'PSKH2', 'OR10G8', 'ACSM2A', 'SYT10', 'CPNE6', 'COL20A1', 'MAGEA11', 'MAS1L', 'MBL2', 'PSG4', 'SSX5', 'ALAS2', 'LINC00202-2', 'ADCYAP1R1', 'SPINT3', 'HYMAI', 'CLEC4M', 'OR3A2', 'NPSR1', 'OPRM1', 'PPAN-P2RY11', 'NYAP2', 'TNP2', 'SLITRK1', 'CCER1', 'HIST2H2AB', 'VCX3A', 'PWAR4', 'SFTPB', 'PASD1', 'SHD', 'SLCO4A1-AS1', 'POU4F2', 'CALHM3', 'KRTAP10-6', 'GPHA2', 'C4ORF50', 'LHCGR', 'ADGRG7', 'OR2T2', 'PNLIPRP1', 'LINC01565', 'NBPF22P', 'TMEM202', 'TNFSF18', 'CACNG3', 'OR2K2', 'OTC', 'SCARNA14', 'RNF151', 'LOC392196', 'IFNL2', 'ARL14', 'SNORD115-26', 'H3F3AP5', 'IQCF2', 'NXNL1', 'CYP1A2', 'F2', 'SALL3', 'LOC285629', 'FOXR1', 'NMUR2', 'SNORA68', 'AWAT1', 'SDC4P', 'SNORA16A', 'SCTR', 'KCNB2', 'AMER3', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999036734615 Coefficient of Determination: 1.0 RMSE: 1.9918334254517937e-15 NRMSE: 5.446349315873099e-16 MAPE: 1.503054671714542e-12 Pearson Correlation: 0.13107347457144447 Spearman Correlation: 0.16819910472699162 Coefficient of Determination: -3.0955592167658113 RMSE: 0.7782949704372378 NRMSE: 0.38308139138602126 MAPE: 580.8908862535712 Predictor: ElasticNet Pearson Correlation: 0.8503215485314685 Spearman Correlation: 0.8179453575355222 Coefficient of Determination: 0.6752822024679487 RMSE: 0.27222166809887605 NRMSE: 0.07443465286158937 MAPE: 168.29512255435185 Pearson Correlation: 0.23214974364283908 Spearman Correlation: 0.26023017743363386 Coefficient of Determination: -0.04292503735364428 RMSE: 0.3927481661707335 NRMSE: 0.19331297217103835 MAPE: 238.78539117765322 Predictor: RandomForests Pearson Correlation: 0.580511166988632 Spearman Correlation: 0.5940393920657424 Coefficient of Determination: 0.3125210472824822 RMSE: 0.3960949887801362 NRMSE: 0.10830582736476263 MAPE: 233.06072282815956 Pearson Correlation: 0.4420960526698323 Spearman Correlation: 0.3743551952863333 Coefficient of Determination: 0.18723625121825505 RMSE: 0.3467127250947191 NRMSE: 0.17065405557729313 MAPE: 232.18275695909725 Fold: 5 Protein: RB1 x_train_column_count: 1007 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'BTNL3', 'F9', 'FAM183CP', 'LINC00111', 'KCNU1', 'LOC727924', 'CXORF51A', 'OR2M3', 'OR10T2', 'OR1S1', 'SOX1', 'SNORD15A', 'HBG1', 'OR10V1', 'FGF23', 'MS4A6E', 'WFDC5', 'GPR151', 'PRM3', 'SCGB1C1', 'CLEC6A', 'PRSS3P2', 'ASAP1-IT1', 'PPY', 'DNAJB8', 'CT47A11', 'TMEM252', 'OR10A5', 'MAGEB10', 'OR8S1', 'PSG7', 'SUN3', 'SPRR1B', 'PRAMEF8', 'CELA2B', 'PLA2G2F', 'CRYAA', 'KLHL40', 'OR2AG1', 'MC2R', 'USP26', 'HIST1H4F', 'DMBT1P1', 'OR8G5', 'OR10K1', 'NPPC', 'PSAPL1', 'SNORD89', 'SLC5A7', 'C1ORF87', 'ALOX12B', 'TUSC7', 'HBBP1', 'LOC391003', 'C15ORF43', 'SFTA3', 'CAPZA3', 'XAGE5', 'LOC391343', 'LINC00636', 'TBC1D28', 'KRT39', 'C20ORF173', 'C22ORF42', 'BMP10', 'SNORA34', 'IFITM5', 'SNORA70B', 'OR4S1', 'PIWIL3', 'C4ORF51', 'TAS2R60', 'CCKBR', 'OR5B2', 'CASC8', 'IQCF2', 'ARR3', 'KRTAP19-1', 'PROKR1', 'FMR1NB', 'NXF2B', 'ARHGAP36', 'P2RX3', 'TTTY15', 'OPN1MW', 'PPBPP1', 'CHODL-AS1', 'PF4', 'KHDC1L', 'LYZL6', 'TEX33', 'OR1B1', 'HBD', 'FAM153C', 'TKTL2', 'ANKRD18DP', 'MYBPHL', 'AKAP14', 'EDDM3A', 'SYT10', 'ACOT12', 'GAGE1', 'C11ORF94', 'CSH2', 'SERPINB4', 'BRDTP1', 'LGI3', 'PRB1', 'SNORA54', 'PRAP1', 'SNORA51', 'OR10S1', 'SFTPC', 'OTP', 'IGF2BP2-AS1', 'SPACA7', 'KCNQ1DN', 'DMRT1', 'YWHAEP7', 'CYP3A4', 'PRSS1', 'ZAR1L', 'C17ORF64', 'GAGE2D', 'FBP2', 'IFNA13', 'KRTAP19-3', 'SLC13A1', 'LHX9', 'CYP2W1', 'LINC00469', 'LOC646813', 'FOXE1', 'C9ORF135', 'OR4K2', 'OTOL1', 'HPD', 'OLIG1', 'PLET1', 'LCNL1', 'CRLF2', 'NEU2', 'GABRG3', 'FCAMR', 'CCDC166', 'SVOP', 'FERD3L', 'FDCSP', 'HAND1', 'NPHS2', 'GH1', 'FAM71C', 'C3ORF49', 'USP17L6P', 'XKR7', 'LINC01101', 'FAM27L', 'VRTN', 'SATB2-AS1', 'SCARNA20', 'CNTNAP5', 'ZFAT-AS1', 'ACSM2A', 'OLAH', 'PTF1A', 'C17ORF78', 'PRDM14', 'HOXC12', 'DNAJC5G', 'LCE1D', 'FMO6P', 'PISRT1', 'TMEM207', 'LINC00696', 'GDNF', 'OR13H1', 'CRNN', 'OR51I2', 'AVPR1B', 'CLDN22', 'SPANXN1', 'ZNF479', 'OR5H6', 'LPO', 'FGA', 'OR6M1', 'PRKAG3', 'OR4D6', 'OR7E24', 'CELA2A', 'IL26', 'HFE2', 'UCMA', 'SCGB1A1', 'OR1L1', 'PWRN2', 'SCN1A', 'MYBPC2', 'FTMT', 'BARHL2', 'OPRD1', 'GYS2', 'IVL', 'OR1K1', 'DEFB110', 'ADAM18', 'EPS8L3', 'CCKAR', 'LOC285627', 'HBZ', 'SLC1A6', 'KRTAP21-1', 'CER1', 'SBSN', 'GABRA6', 'LOC729609', 'PRG1', 'SERPINI2', 'CPLX3', 'FAM27B', 'LMNTD1', 'TFF2', 'CT45A1', 'OR4C12', 'OR4D2', 'SCARNA11', 'POM121L2', 'OR56B1', 'NKX2-1', 'CLCA4', 'HBG2', 'LINC00488', 'SNORA59B', 'OR8D4', 'CYP7A1', 'FOXN3-AS2', 'GBX2', 'GAGE2B', 'LINC00608', 'CGB8', 'OR2M4', 'OR52A4P', 'DRGX', 'HTR3E', 'SNORA38B', 'ANP32D', 'LYZL1', 'CCL24', 'HTR5A', 'SLITRK3', 'YIPF7', 'TSPY1', 'SLC25A31', 'RAX', 'ALLC', 'SYCN', 'SNORA44', 'TARM1', 'HMHB1', 'SLC35G3', 'TMEM88B', 'OR6C74', 'ALX4', 'SPACA3', 'LINC00923', 'A1CF', 'OR6F1', 'CD200R1L', 'SLC51B', 'TSPY2', 'FRMPD2B', 'OR9A2', 'KRT13', 'SNORD94', 'TSKS', 'OR8J3', 'NPBWR2', 'ARL5C', 'OR2T29', 'DYDC1', 'GDPD2', 'ARID3C', 'LINC00602', 'NKX2-6', 'LINC00934', 'OR11H4', 'GOLGA8EP', 'OR13C3', 'PLG', 'TRHR', 'LINC00895', 'MAP3K15', 'MAGEA9B', 'ITLN2', 'POU6F2', 'SRY', 'RAX2', 'OR1N1', 'LINC00575', 'SSX5', 'SNORA37', 'TPTE2', 'CNTN5', 'TCERG1L', 'DPPA2', 'NTS', 'ADGRG4', 'ZIM3', 'BMP15', 'ZCCHC13', 'POTED', 'MUSK', 'SNORA71A', 'KIR3DL3', 'LINC00304', 'KCNK4', 'GRIN2B', 'APOC3', 'IQCF3', 'C2ORF83', 'MYH1', 'C18ORF42', 'TRPM1', 'GPR22', 'IL36RN', 'ALPPL2', 'GAGE2C', 'GAGE12F', 'KCNMB2', 'SNORD116-19', 'TPD52L3', 'OR2L8', 'C20ORF166-AS1', 'NLRP8', 'SNORA74A', 'SNORA76C', 'OR2A14', 'OR4F15', 'CFHR4', 'OR2AT4', 'OR11H6', 'SPANXN3', 'CPLX4', 'SOX3', 'FAM170B', 'DAOA', 'CYP2C18', 'LINC01312', 'CSN3', 'EDDM3B', 'GUCA2B', 'ITIH1', 'USH1C', 'F13B', 'ZNF705A', 'FFAR1', 'GPR52', 'SYCP1', 'ARSF', 'EPPIN', 'DNMT3L', 'PRAMEF14', 'MUC2', 'MTVR2', 'LRRC30', 'SPATA31C1', 'MAGEA1', 'ADAM29', 'TRIM48', 'OR52N5', 'CXADRP2', 'BPIFB3', 'DUSP21', 'OR2T10', 'FAM205A', 'SLC32A1', 'DMP1', 'FOXD4L3', 'PPIAL4E', 'MMP23A', 'PSKH2', 'BTN1A1', 'OR5C1', 'C6ORF10', 'ACER1', 'NKAIN3', 'AATK-AS1', 'SPINK1', 'IFNA14', 'MORC1', 'TRIM75P', 'LOC647859', 'TTTY2', 'TMIGD1', 'SPOCK3', 'CHRNB3', 'BET1P1', 'GCSAML-AS1', 'CSNK1A1P1', 'OR2A2', 'SCARNA8', 'FAM19A4', 'ADGRG7', 'KRTAP4-3', 'OR9G4', 'TMEM72', 'CRYGC', 'PAGE5', 'ODAM', 'OR1S2', 'KRTAP1-5', 'REC114', 'KRTAP1-1', 'TREML4', 'IQCF6', 'TMEM14E', 'KRTAP12-2', 'PPY2P', 'ZFY', 'TSPAN19', 'IQCJ', 'KRT83', 'RFX6', 'PLA2G12B', 'DMRTC1', 'SNORD115-26', 'OR6C4', 'COL6A4P1', 'DCT', 'VWC2L', 'SH2D7', 'HCRTR1', 'NUTM1', 'OR52A5', 'KRT3', 'TPTE', 'REG4', 'AADACL3', 'OR2G6', 'CT47A1', 'CLEC4G', 'OR6S1', 'SNORA16B', 'CGB5', 'BTF3P11', 'SPATA3', 'MAGEA5', 'LINC01020', 'SPDYC', 'KLRC4', 'S100G', 'KRTAP11-1', 'RAPGEF4-AS1', 'LOC400736', 'NF1P2', 'NXPE1', 'KRT85', 'FRMPD4', 'TSGA13', 'RPE65', 'TRPV5', 'LOC100129935', 'ANKRD34C', 'EPB42', 'CA6', 'OR2F1', 'APCS', 'CHIAP2', 'FOXG1', 'KCNJ16', 'ASB15', 'IHH', 'AKR1D1', 'OACYLP', 'GNAS-AS1', 'KRT74', 'KRTAP3-2', 'LOC400940', 'SDR16C6P', 'B3GNT6', 'IFNL1', 'PCGEM1', 'MAGEA12', 'POTEH', 'COX7B2', 'TCP10L2', 'CPA2', 'LINC00303', 'C2ORF27B', 'MAGEB3', 'PCP4', 'DEFB126', 'GFI1B', 'CTRB1', 'C1ORF146', 'UGT1A4', 'CNGA2', 'SLC22A10', 'DISC2', 'SPANXA2', 'INSM2', 'MTNR1B', 'LY6G6D', 'C15ORF32', 'TSPEAR-AS2', 'PRR32', 'TMPRSS11F', 'PRSS48', 'FAM24A', 'GABRR3', 'OR2A12', 'GML', 'TMEM132D', 'LINC00113', 'RNASE8', 'HIST2H2AB', 'ZSCAN10', 'LINC01591', 'NKX6-2', 'ABRA', 'GLTPD2', 'SNORA72', 'OR6B1', 'WFDC8', 'FBXW12', 'LINC00691', 'MOS', 'LOC284661', 'TRIM55', 'LINC01142', 'OR4A16', 'RBM46', 'TLX3', 'HYPM', 'TAAR9', 'OR4D10', 'CNTNAP4', 'CABS1', 'PRAMEF16', 'VWA5B1', 'CRYGB', 'SNORA2B', 'LINC00452', 'GCG', 'SNORA27', 'CFC1B', 'SCGB3A2', 'PRAMEF5', 'FAM170A', 'OR51T1', 'CGB2', 'GSC2', 'HIST1H3A', 'CCK', 'LRRTM1', 'AGXT2', 'ADRB3', 'AIRE', 'GSTA5', 'OR4D5', 'OR10AD1', 'DUXA', 'MCF2', 'KRTAP12-1', 'MS4A10', 'RPL3L', 'LOC643923', 'AADAC', 'DEFB123', 'OR5B17', 'SERPINB3', 'ANKRD20A20P', 'SNCB', 'MYF5', 'HMSD', 'MT1B', 'CST9L', 'EPGN', 'ZG16', 'SNORD15B', 'TRIM15', 'RHAG', 'GABRB1', 'CLRN1', 'TBC1D3P2', 'ART1', 'OR4D1', 'PRLHR', 'KRTAP10-11', 'GRK1', 'HYMAI', 'MYADML', 'BANF2', 'USP50', 'B3GALT1', 'NPSR1-AS1', 'HRK', 'INS-IGF2', 'NHLH2', 'PABPC1L2A', 'SLC5A2', 'FAM47C', 'TRIM49', 'OR5T2', 'CEACAM22P', 'AQP2', 'MMD2', 'APOA5', 'PACRG-AS1', 'UTS2R', 'PRSS57', 'LINC00523', 'SPINK14', 'MYH7', 'WFDC6', 'INS', 'IGFBP1', 'FAM19A1', 'IFNB1', 'TAS2R42', 'INSC', 'MUC13', 'KRTAP12-3', 'SLCO1B7', 'GHSR', 'CYP1A2', 'C1ORF140', 'SPINT3', 'TNFSF18', 'KLK9', 'STATH', 'KCNB2', 'FLJ25758', 'LINC00202-2', 'MAS1L', 'IFNL2', 'FOXR1', 'SNORA16A', 'IL31', 'MAGEA11', 'TNP2', 'LOC392196', 'SNORA68', 'SLITRK1', 'LOC285629', 'FAM138D', 'FAM138B', 'AMER3', 'F2', 'NPSR1', 'MRGPRX1', 'TAS2R13', 'CTRB2', 'LOC100130417', 'VCX3A', 'ACTR3BP2', 'FAM9B', 'LINC01105', 'KCNK18', 'CLEC4M', 'NMUR2', 'GOLGA2P6', 'ALAS2', 'OR52W1', 'OR52K2', 'ZNF735', 'OR7D4', 'OR10G8', 'SLC5A8', 'OR52N2', 'SFTPB', 'PSG4', 'AKR1C8P', 'SLC10A1', 'C3ORF30', 'CALHM3', 'PASD1', 'OR5H14', 'AWAT1', 'HIST1H3B', 'RNF151', 'OR5K1', 'OR6B2', 'ADCYAP1R1', 'OR52K1', 'CACNG3', 'SHH', 'CCER1', 'OTC', 'OR51B5', 'OR8G2', 'C4ORF50', 'HGC6.3', 'SDC4P', 'OR8H2', 'OR3A2', 'SHD', 'PDX1', 'ERC2-IT1', 'HAO1', 'KRTAP21-2', 'OR4C16', 'CLCA3P', 'VPREB1', 'LINC00052', 'SERPINA7', 'PRLH', 'TSNAX-DISC1', 'SKINTL', 'DSCR10', 'TSPAN16', 'LINC00597', 'CHRNA9', 'HTR1B', 'TMEM8C', 'PRAC1', 'HAVCR1', 'SLC38A8', 'LEUTX', 'F11', 'OR4X2', 'HNRNPCL1', 'FMO9P', 'C7ORF57', 'GPR61', 'NEUROG3', 'AHSG', 'PSG11', 'KRTAP7-1', 'GPHA2', 'DACH2', 'HSD52', 'BRINP3', 'ACSM2B', 'B4GALNT2', 'CALR3', 'SPATA45', 'PPAN-P2RY11', 'SLC4A9', 'POU4F2', 'UGT2B28', 'KRT32', 'SLC25A3P1', 'CCDC63', 'HS3ST4', 'NXNL1', 'SLC9C1', 'GOLGA6L1', 'CPNE6', 'RNF222', 'CELP', 'SSX2', 'ACTBL2', 'VGLL2', 'HPSE2', 'CD1B', 'CLRN1-AS1', 'KRTAP10-7', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.049983648165895e-15 NRMSE: 5.187076805332867e-16 MAPE: 3.947205247492603e-12 Pearson Correlation: 0.1033204218136594 Spearman Correlation: 0.048327285876382506 Coefficient of Determination: -2.8647350699771295 RMSE: 0.47254073217190434 NRMSE: 0.2382574330778212 MAPE: 2222.829819837215 Predictor: ElasticNet Pearson Correlation: 0.7112910602582068 Spearman Correlation: 0.5825205717835154 Coefficient of Determination: 0.43273127563097724 RMSE: 0.176170847576435 NRMSE: 0.08703104270583628 MAPE: 191.00208825660962 Pearson Correlation: 0.09225245523971214 Spearman Correlation: 0.2045786107058692 Coefficient of Determination: -0.15022033681010827 RMSE: 0.25779227955032413 NRMSE: 0.1299801744299075 MAPE: 335.89372592103615 Predictor: RandomForests Pearson Correlation: 0.6084497343831214 Spearman Correlation: 0.4608968342020002 Coefficient of Determination: 0.18902293127565017 RMSE: 0.21064148649195327 NRMSE: 0.1040600556715162 MAPE: 136.9252101323524 Pearson Correlation: 0.08985096777334123 Spearman Correlation: 0.1837653836082744 Coefficient of Determination: -0.10339848144769226 RMSE: 0.2524908107028364 NRMSE: 0.12730714695703993 MAPE: 249.16368274128143 Protein: CDH1 x_train_column_count: 1007 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'BTNL3', 'F9', 'FAM183CP', 'LINC00111', 'KCNU1', 'LOC727924', 'CXORF51A', 'OR2M3', 'OR10T2', 'OR1S1', 'SOX1', 'SNORD15A', 'HBG1', 'OR10V1', 'FGF23', 'MS4A6E', 'WFDC5', 'GPR151', 'PRM3', 'SCGB1C1', 'CLEC6A', 'PRSS3P2', 'ASAP1-IT1', 'PPY', 'DNAJB8', 'CT47A11', 'TMEM252', 'OR10A5', 'MAGEB10', 'OR8S1', 'PSG7', 'SUN3', 'SPRR1B', 'PRAMEF8', 'CELA2B', 'PLA2G2F', 'CRYAA', 'KLHL40', 'OR2AG1', 'MC2R', 'USP26', 'HIST1H4F', 'DMBT1P1', 'OR8G5', 'OR10K1', 'NPPC', 'PSAPL1', 'SNORD89', 'SLC5A7', 'C1ORF87', 'ALOX12B', 'TUSC7', 'HBBP1', 'LOC391003', 'C15ORF43', 'SFTA3', 'CAPZA3', 'XAGE5', 'LOC391343', 'LINC00636', 'TBC1D28', 'KRT39', 'C20ORF173', 'C22ORF42', 'BMP10', 'SNORA34', 'IFITM5', 'SNORA70B', 'OR4S1', 'PIWIL3', 'C4ORF51', 'TAS2R60', 'CCKBR', 'OR5B2', 'CASC8', 'IQCF2', 'ARR3', 'KRTAP19-1', 'PROKR1', 'FMR1NB', 'NXF2B', 'ARHGAP36', 'P2RX3', 'TTTY15', 'OPN1MW', 'PPBPP1', 'CHODL-AS1', 'PF4', 'KHDC1L', 'LYZL6', 'TEX33', 'OR1B1', 'HBD', 'FAM153C', 'TKTL2', 'ANKRD18DP', 'MYBPHL', 'AKAP14', 'EDDM3A', 'SYT10', 'ACOT12', 'GAGE1', 'C11ORF94', 'CSH2', 'SERPINB4', 'BRDTP1', 'LGI3', 'PRB1', 'SNORA54', 'PRAP1', 'SNORA51', 'OR10S1', 'SFTPC', 'OTP', 'IGF2BP2-AS1', 'SPACA7', 'KCNQ1DN', 'DMRT1', 'YWHAEP7', 'CYP3A4', 'PRSS1', 'ZAR1L', 'C17ORF64', 'GAGE2D', 'FBP2', 'IFNA13', 'KRTAP19-3', 'SLC13A1', 'LHX9', 'CYP2W1', 'LINC00469', 'LOC646813', 'FOXE1', 'C9ORF135', 'OR4K2', 'OTOL1', 'HPD', 'OLIG1', 'PLET1', 'LCNL1', 'CRLF2', 'NEU2', 'GABRG3', 'FCAMR', 'CCDC166', 'SVOP', 'FERD3L', 'FDCSP', 'HAND1', 'NPHS2', 'GH1', 'FAM71C', 'C3ORF49', 'USP17L6P', 'XKR7', 'LINC01101', 'FAM27L', 'VRTN', 'SATB2-AS1', 'SCARNA20', 'CNTNAP5', 'ZFAT-AS1', 'ACSM2A', 'OLAH', 'PTF1A', 'C17ORF78', 'PRDM14', 'HOXC12', 'DNAJC5G', 'LCE1D', 'FMO6P', 'PISRT1', 'TMEM207', 'LINC00696', 'GDNF', 'OR13H1', 'CRNN', 'OR51I2', 'AVPR1B', 'CLDN22', 'SPANXN1', 'ZNF479', 'OR5H6', 'LPO', 'FGA', 'OR6M1', 'PRKAG3', 'OR4D6', 'OR7E24', 'CELA2A', 'IL26', 'HFE2', 'UCMA', 'SCGB1A1', 'OR1L1', 'PWRN2', 'SCN1A', 'MYBPC2', 'FTMT', 'BARHL2', 'OPRD1', 'GYS2', 'IVL', 'OR1K1', 'DEFB110', 'ADAM18', 'EPS8L3', 'CCKAR', 'LOC285627', 'HBZ', 'SLC1A6', 'KRTAP21-1', 'CER1', 'SBSN', 'GABRA6', 'LOC729609', 'PRG1', 'SERPINI2', 'CPLX3', 'FAM27B', 'LMNTD1', 'TFF2', 'CT45A1', 'OR4C12', 'OR4D2', 'SCARNA11', 'POM121L2', 'OR56B1', 'NKX2-1', 'CLCA4', 'HBG2', 'LINC00488', 'SNORA59B', 'OR8D4', 'CYP7A1', 'FOXN3-AS2', 'GBX2', 'GAGE2B', 'LINC00608', 'CGB8', 'OR2M4', 'OR52A4P', 'DRGX', 'HTR3E', 'SNORA38B', 'ANP32D', 'LYZL1', 'CCL24', 'HTR5A', 'SLITRK3', 'YIPF7', 'TSPY1', 'SLC25A31', 'RAX', 'ALLC', 'SYCN', 'SNORA44', 'TARM1', 'HMHB1', 'SLC35G3', 'TMEM88B', 'OR6C74', 'ALX4', 'SPACA3', 'LINC00923', 'A1CF', 'OR6F1', 'CD200R1L', 'SLC51B', 'TSPY2', 'FRMPD2B', 'OR9A2', 'KRT13', 'SNORD94', 'TSKS', 'OR8J3', 'NPBWR2', 'ARL5C', 'OR2T29', 'DYDC1', 'GDPD2', 'ARID3C', 'LINC00602', 'NKX2-6', 'LINC00934', 'OR11H4', 'GOLGA8EP', 'OR13C3', 'PLG', 'TRHR', 'LINC00895', 'MAP3K15', 'MAGEA9B', 'ITLN2', 'POU6F2', 'SRY', 'RAX2', 'OR1N1', 'LINC00575', 'SSX5', 'SNORA37', 'TPTE2', 'CNTN5', 'TCERG1L', 'DPPA2', 'NTS', 'ADGRG4', 'ZIM3', 'BMP15', 'ZCCHC13', 'POTED', 'MUSK', 'SNORA71A', 'KIR3DL3', 'LINC00304', 'KCNK4', 'GRIN2B', 'APOC3', 'IQCF3', 'C2ORF83', 'MYH1', 'C18ORF42', 'TRPM1', 'GPR22', 'IL36RN', 'ALPPL2', 'GAGE2C', 'GAGE12F', 'KCNMB2', 'SNORD116-19', 'TPD52L3', 'OR2L8', 'C20ORF166-AS1', 'NLRP8', 'SNORA74A', 'SNORA76C', 'OR2A14', 'OR4F15', 'CFHR4', 'OR2AT4', 'OR11H6', 'SPANXN3', 'CPLX4', 'SOX3', 'FAM170B', 'DAOA', 'CYP2C18', 'LINC01312', 'CSN3', 'EDDM3B', 'GUCA2B', 'ITIH1', 'USH1C', 'F13B', 'ZNF705A', 'FFAR1', 'GPR52', 'SYCP1', 'ARSF', 'EPPIN', 'DNMT3L', 'PRAMEF14', 'MUC2', 'MTVR2', 'LRRC30', 'SPATA31C1', 'MAGEA1', 'ADAM29', 'TRIM48', 'OR52N5', 'CXADRP2', 'BPIFB3', 'DUSP21', 'OR2T10', 'FAM205A', 'SLC32A1', 'DMP1', 'FOXD4L3', 'PPIAL4E', 'MMP23A', 'PSKH2', 'BTN1A1', 'OR5C1', 'C6ORF10', 'ACER1', 'NKAIN3', 'AATK-AS1', 'SPINK1', 'IFNA14', 'MORC1', 'TRIM75P', 'LOC647859', 'TTTY2', 'TMIGD1', 'SPOCK3', 'CHRNB3', 'BET1P1', 'GCSAML-AS1', 'CSNK1A1P1', 'OR2A2', 'SCARNA8', 'FAM19A4', 'ADGRG7', 'KRTAP4-3', 'OR9G4', 'TMEM72', 'CRYGC', 'PAGE5', 'ODAM', 'OR1S2', 'KRTAP1-5', 'REC114', 'KRTAP1-1', 'TREML4', 'IQCF6', 'TMEM14E', 'KRTAP12-2', 'PPY2P', 'ZFY', 'TSPAN19', 'IQCJ', 'KRT83', 'RFX6', 'PLA2G12B', 'DMRTC1', 'SNORD115-26', 'OR6C4', 'COL6A4P1', 'DCT', 'VWC2L', 'SH2D7', 'HCRTR1', 'NUTM1', 'OR52A5', 'KRT3', 'TPTE', 'REG4', 'AADACL3', 'OR2G6', 'CT47A1', 'CLEC4G', 'OR6S1', 'SNORA16B', 'CGB5', 'BTF3P11', 'SPATA3', 'MAGEA5', 'LINC01020', 'SPDYC', 'KLRC4', 'S100G', 'KRTAP11-1', 'RAPGEF4-AS1', 'LOC400736', 'NF1P2', 'NXPE1', 'KRT85', 'FRMPD4', 'TSGA13', 'RPE65', 'TRPV5', 'LOC100129935', 'ANKRD34C', 'EPB42', 'CA6', 'OR2F1', 'APCS', 'CHIAP2', 'FOXG1', 'KCNJ16', 'ASB15', 'IHH', 'AKR1D1', 'OACYLP', 'GNAS-AS1', 'KRT74', 'KRTAP3-2', 'LOC400940', 'SDR16C6P', 'B3GNT6', 'IFNL1', 'PCGEM1', 'MAGEA12', 'POTEH', 'COX7B2', 'TCP10L2', 'CPA2', 'LINC00303', 'C2ORF27B', 'MAGEB3', 'PCP4', 'DEFB126', 'GFI1B', 'CTRB1', 'C1ORF146', 'UGT1A4', 'CNGA2', 'SLC22A10', 'DISC2', 'SPANXA2', 'INSM2', 'MTNR1B', 'LY6G6D', 'C15ORF32', 'TSPEAR-AS2', 'PRR32', 'TMPRSS11F', 'PRSS48', 'FAM24A', 'GABRR3', 'OR2A12', 'GML', 'TMEM132D', 'LINC00113', 'RNASE8', 'HIST2H2AB', 'ZSCAN10', 'LINC01591', 'NKX6-2', 'ABRA', 'GLTPD2', 'SNORA72', 'OR6B1', 'WFDC8', 'FBXW12', 'LINC00691', 'MOS', 'LOC284661', 'TRIM55', 'LINC01142', 'OR4A16', 'RBM46', 'TLX3', 'HYPM', 'TAAR9', 'OR4D10', 'CNTNAP4', 'CABS1', 'PRAMEF16', 'VWA5B1', 'CRYGB', 'SNORA2B', 'LINC00452', 'GCG', 'SNORA27', 'CFC1B', 'SCGB3A2', 'PRAMEF5', 'FAM170A', 'OR51T1', 'CGB2', 'GSC2', 'HIST1H3A', 'CCK', 'LRRTM1', 'AGXT2', 'ADRB3', 'AIRE', 'GSTA5', 'OR4D5', 'OR10AD1', 'DUXA', 'MCF2', 'KRTAP12-1', 'MS4A10', 'RPL3L', 'LOC643923', 'AADAC', 'DEFB123', 'OR5B17', 'SERPINB3', 'ANKRD20A20P', 'SNCB', 'MYF5', 'HMSD', 'MT1B', 'CST9L', 'EPGN', 'ZG16', 'SNORD15B', 'TRIM15', 'RHAG', 'GABRB1', 'CLRN1', 'TBC1D3P2', 'ART1', 'OR4D1', 'PRLHR', 'KRTAP10-11', 'GRK1', 'HYMAI', 'MYADML', 'BANF2', 'USP50', 'B3GALT1', 'NPSR1-AS1', 'HRK', 'INS-IGF2', 'NHLH2', 'PABPC1L2A', 'SLC5A2', 'FAM47C', 'TRIM49', 'OR5T2', 'CEACAM22P', 'AQP2', 'MMD2', 'APOA5', 'PACRG-AS1', 'UTS2R', 'PRSS57', 'LINC00523', 'SPINK14', 'MYH7', 'WFDC6', 'INS', 'IGFBP1', 'FAM19A1', 'IFNB1', 'TAS2R42', 'INSC', 'MUC13', 'KRTAP12-3', 'SLCO1B7', 'GHSR', 'CYP1A2', 'C1ORF140', 'SPINT3', 'TNFSF18', 'KLK9', 'STATH', 'KCNB2', 'FLJ25758', 'LINC00202-2', 'MAS1L', 'IFNL2', 'FOXR1', 'SNORA16A', 'IL31', 'MAGEA11', 'TNP2', 'LOC392196', 'SNORA68', 'SLITRK1', 'LOC285629', 'FAM138D', 'FAM138B', 'AMER3', 'F2', 'NPSR1', 'MRGPRX1', 'TAS2R13', 'CTRB2', 'LOC100130417', 'VCX3A', 'ACTR3BP2', 'FAM9B', 'LINC01105', 'KCNK18', 'CLEC4M', 'NMUR2', 'GOLGA2P6', 'ALAS2', 'OR52W1', 'OR52K2', 'ZNF735', 'OR7D4', 'OR10G8', 'SLC5A8', 'OR52N2', 'SFTPB', 'PSG4', 'AKR1C8P', 'SLC10A1', 'C3ORF30', 'CALHM3', 'PASD1', 'OR5H14', 'AWAT1', 'HIST1H3B', 'RNF151', 'OR5K1', 'OR6B2', 'ADCYAP1R1', 'OR52K1', 'CACNG3', 'SHH', 'CCER1', 'OTC', 'OR51B5', 'OR8G2', 'C4ORF50', 'HGC6.3', 'SDC4P', 'OR8H2', 'OR3A2', 'SHD', 'PDX1', 'ERC2-IT1', 'HAO1', 'KRTAP21-2', 'OR4C16', 'CLCA3P', 'VPREB1', 'LINC00052', 'SERPINA7', 'PRLH', 'TSNAX-DISC1', 'SKINTL', 'DSCR10', 'TSPAN16', 'LINC00597', 'CHRNA9', 'HTR1B', 'TMEM8C', 'PRAC1', 'HAVCR1', 'SLC38A8', 'LEUTX', 'F11', 'OR4X2', 'HNRNPCL1', 'FMO9P', 'C7ORF57', 'GPR61', 'NEUROG3', 'AHSG', 'PSG11', 'KRTAP7-1', 'GPHA2', 'DACH2', 'HSD52', 'BRINP3', 'ACSM2B', 'B4GALNT2', 'CALR3', 'SPATA45', 'PPAN-P2RY11', 'SLC4A9', 'POU4F2', 'UGT2B28', 'KRT32', 'SLC25A3P1', 'CCDC63', 'HS3ST4', 'NXNL1', 'SLC9C1', 'GOLGA6L1', 'CPNE6', 'RNF222', 'CELP', 'SSX2', 'ACTBL2', 'VGLL2', 'HPSE2', 'CD1B', 'CLRN1-AS1', 'KRTAP10-7', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.721942658691529e-15 NRMSE: 7.518777520925334e-16 MAPE: 2.3535969008260822e-12 Pearson Correlation: 0.08169716730202707 Spearman Correlation: 0.03131959251362236 Coefficient of Determination: -1.9742345920241045 RMSE: 2.003546665774635 NRMSE: 0.3940033953658011 MAPE: 3132.191885023049 Predictor: ElasticNet Pearson Correlation: 0.9188959610275778 Spearman Correlation: 0.8912210655802985 Coefficient of Determination: 0.8177255650912092 RMSE: 0.4807611277076415 NRMSE: 0.0765518817406518 MAPE: 141.06437100000667 Pearson Correlation: 0.38469793271413394 Spearman Correlation: 0.3931545281113232 Coefficient of Determination: 0.08454435085641587 RMSE: 1.1115538483108869 NRMSE: 0.21859036170594226 MAPE: 521.8910036712227 Predictor: RandomForests Pearson Correlation: 0.777480596115221 Spearman Correlation: 0.6941431188967646 Coefficient of Determination: 0.5999641745641522 RMSE: 0.7122228587968452 NRMSE: 0.11340767153862061 MAPE: 134.38299943223882 Pearson Correlation: 0.6295218204773934 Spearman Correlation: 0.5498760579975901 Coefficient of Determination: 0.3855883504522396 RMSE: 0.9106292014438792 NRMSE: 0.17907793385457105 MAPE: 411.1486396165814 Protein: CDH2 x_train_column_count: 1007 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'BTNL3', 'F9', 'FAM183CP', 'LINC00111', 'KCNU1', 'LOC727924', 'CXORF51A', 'OR2M3', 'OR10T2', 'OR1S1', 'SOX1', 'SNORD15A', 'HBG1', 'OR10V1', 'FGF23', 'MS4A6E', 'WFDC5', 'GPR151', 'PRM3', 'SCGB1C1', 'CLEC6A', 'PRSS3P2', 'ASAP1-IT1', 'PPY', 'DNAJB8', 'CT47A11', 'TMEM252', 'OR10A5', 'MAGEB10', 'OR8S1', 'PSG7', 'SUN3', 'SPRR1B', 'PRAMEF8', 'CELA2B', 'PLA2G2F', 'CRYAA', 'KLHL40', 'OR2AG1', 'MC2R', 'USP26', 'HIST1H4F', 'DMBT1P1', 'OR8G5', 'OR10K1', 'NPPC', 'PSAPL1', 'SNORD89', 'SLC5A7', 'C1ORF87', 'ALOX12B', 'TUSC7', 'HBBP1', 'LOC391003', 'C15ORF43', 'SFTA3', 'CAPZA3', 'XAGE5', 'LOC391343', 'LINC00636', 'TBC1D28', 'KRT39', 'C20ORF173', 'C22ORF42', 'BMP10', 'SNORA34', 'IFITM5', 'SNORA70B', 'OR4S1', 'PIWIL3', 'C4ORF51', 'TAS2R60', 'CCKBR', 'OR5B2', 'CASC8', 'IQCF2', 'ARR3', 'KRTAP19-1', 'PROKR1', 'FMR1NB', 'NXF2B', 'ARHGAP36', 'P2RX3', 'TTTY15', 'OPN1MW', 'PPBPP1', 'CHODL-AS1', 'PF4', 'KHDC1L', 'LYZL6', 'TEX33', 'OR1B1', 'HBD', 'FAM153C', 'TKTL2', 'ANKRD18DP', 'MYBPHL', 'AKAP14', 'EDDM3A', 'SYT10', 'ACOT12', 'GAGE1', 'C11ORF94', 'CSH2', 'SERPINB4', 'BRDTP1', 'LGI3', 'PRB1', 'SNORA54', 'PRAP1', 'SNORA51', 'OR10S1', 'SFTPC', 'OTP', 'IGF2BP2-AS1', 'SPACA7', 'KCNQ1DN', 'DMRT1', 'YWHAEP7', 'CYP3A4', 'PRSS1', 'ZAR1L', 'C17ORF64', 'GAGE2D', 'FBP2', 'IFNA13', 'KRTAP19-3', 'SLC13A1', 'LHX9', 'CYP2W1', 'LINC00469', 'LOC646813', 'FOXE1', 'C9ORF135', 'OR4K2', 'OTOL1', 'HPD', 'OLIG1', 'PLET1', 'LCNL1', 'CRLF2', 'NEU2', 'GABRG3', 'FCAMR', 'CCDC166', 'SVOP', 'FERD3L', 'FDCSP', 'HAND1', 'NPHS2', 'GH1', 'FAM71C', 'C3ORF49', 'USP17L6P', 'XKR7', 'LINC01101', 'FAM27L', 'VRTN', 'SATB2-AS1', 'SCARNA20', 'CNTNAP5', 'ZFAT-AS1', 'ACSM2A', 'OLAH', 'PTF1A', 'C17ORF78', 'PRDM14', 'HOXC12', 'DNAJC5G', 'LCE1D', 'FMO6P', 'PISRT1', 'TMEM207', 'LINC00696', 'GDNF', 'OR13H1', 'CRNN', 'OR51I2', 'AVPR1B', 'CLDN22', 'SPANXN1', 'ZNF479', 'OR5H6', 'LPO', 'FGA', 'OR6M1', 'PRKAG3', 'OR4D6', 'OR7E24', 'CELA2A', 'IL26', 'HFE2', 'UCMA', 'SCGB1A1', 'OR1L1', 'PWRN2', 'SCN1A', 'MYBPC2', 'FTMT', 'BARHL2', 'OPRD1', 'GYS2', 'IVL', 'OR1K1', 'DEFB110', 'ADAM18', 'EPS8L3', 'CCKAR', 'LOC285627', 'HBZ', 'SLC1A6', 'KRTAP21-1', 'CER1', 'SBSN', 'GABRA6', 'LOC729609', 'PRG1', 'SERPINI2', 'CPLX3', 'FAM27B', 'LMNTD1', 'TFF2', 'CT45A1', 'OR4C12', 'OR4D2', 'SCARNA11', 'POM121L2', 'OR56B1', 'NKX2-1', 'CLCA4', 'HBG2', 'LINC00488', 'SNORA59B', 'OR8D4', 'CYP7A1', 'FOXN3-AS2', 'GBX2', 'GAGE2B', 'LINC00608', 'CGB8', 'OR2M4', 'OR52A4P', 'DRGX', 'HTR3E', 'SNORA38B', 'ANP32D', 'LYZL1', 'CCL24', 'HTR5A', 'SLITRK3', 'YIPF7', 'TSPY1', 'SLC25A31', 'RAX', 'ALLC', 'SYCN', 'SNORA44', 'TARM1', 'HMHB1', 'SLC35G3', 'TMEM88B', 'OR6C74', 'ALX4', 'SPACA3', 'LINC00923', 'A1CF', 'OR6F1', 'CD200R1L', 'SLC51B', 'TSPY2', 'FRMPD2B', 'OR9A2', 'KRT13', 'SNORD94', 'TSKS', 'OR8J3', 'NPBWR2', 'ARL5C', 'OR2T29', 'DYDC1', 'GDPD2', 'ARID3C', 'LINC00602', 'NKX2-6', 'LINC00934', 'OR11H4', 'GOLGA8EP', 'OR13C3', 'PLG', 'TRHR', 'LINC00895', 'MAP3K15', 'MAGEA9B', 'ITLN2', 'POU6F2', 'SRY', 'RAX2', 'OR1N1', 'LINC00575', 'SSX5', 'SNORA37', 'TPTE2', 'CNTN5', 'TCERG1L', 'DPPA2', 'NTS', 'ADGRG4', 'ZIM3', 'BMP15', 'ZCCHC13', 'POTED', 'MUSK', 'SNORA71A', 'KIR3DL3', 'LINC00304', 'KCNK4', 'GRIN2B', 'APOC3', 'IQCF3', 'C2ORF83', 'MYH1', 'C18ORF42', 'TRPM1', 'GPR22', 'IL36RN', 'ALPPL2', 'GAGE2C', 'GAGE12F', 'KCNMB2', 'SNORD116-19', 'TPD52L3', 'OR2L8', 'C20ORF166-AS1', 'NLRP8', 'SNORA74A', 'SNORA76C', 'OR2A14', 'OR4F15', 'CFHR4', 'OR2AT4', 'OR11H6', 'SPANXN3', 'CPLX4', 'SOX3', 'FAM170B', 'DAOA', 'CYP2C18', 'LINC01312', 'CSN3', 'EDDM3B', 'GUCA2B', 'ITIH1', 'USH1C', 'F13B', 'ZNF705A', 'FFAR1', 'GPR52', 'SYCP1', 'ARSF', 'EPPIN', 'DNMT3L', 'PRAMEF14', 'MUC2', 'MTVR2', 'LRRC30', 'SPATA31C1', 'MAGEA1', 'ADAM29', 'TRIM48', 'OR52N5', 'CXADRP2', 'BPIFB3', 'DUSP21', 'OR2T10', 'FAM205A', 'SLC32A1', 'DMP1', 'FOXD4L3', 'PPIAL4E', 'MMP23A', 'PSKH2', 'BTN1A1', 'OR5C1', 'C6ORF10', 'ACER1', 'NKAIN3', 'AATK-AS1', 'SPINK1', 'IFNA14', 'MORC1', 'TRIM75P', 'LOC647859', 'TTTY2', 'TMIGD1', 'SPOCK3', 'CHRNB3', 'BET1P1', 'GCSAML-AS1', 'CSNK1A1P1', 'OR2A2', 'SCARNA8', 'FAM19A4', 'ADGRG7', 'KRTAP4-3', 'OR9G4', 'TMEM72', 'CRYGC', 'PAGE5', 'ODAM', 'OR1S2', 'KRTAP1-5', 'REC114', 'KRTAP1-1', 'TREML4', 'IQCF6', 'TMEM14E', 'KRTAP12-2', 'PPY2P', 'ZFY', 'TSPAN19', 'IQCJ', 'KRT83', 'RFX6', 'PLA2G12B', 'DMRTC1', 'SNORD115-26', 'OR6C4', 'COL6A4P1', 'DCT', 'VWC2L', 'SH2D7', 'HCRTR1', 'NUTM1', 'OR52A5', 'KRT3', 'TPTE', 'REG4', 'AADACL3', 'OR2G6', 'CT47A1', 'CLEC4G', 'OR6S1', 'SNORA16B', 'CGB5', 'BTF3P11', 'SPATA3', 'MAGEA5', 'LINC01020', 'SPDYC', 'KLRC4', 'S100G', 'KRTAP11-1', 'RAPGEF4-AS1', 'LOC400736', 'NF1P2', 'NXPE1', 'KRT85', 'FRMPD4', 'TSGA13', 'RPE65', 'TRPV5', 'LOC100129935', 'ANKRD34C', 'EPB42', 'CA6', 'OR2F1', 'APCS', 'CHIAP2', 'FOXG1', 'KCNJ16', 'ASB15', 'IHH', 'AKR1D1', 'OACYLP', 'GNAS-AS1', 'KRT74', 'KRTAP3-2', 'LOC400940', 'SDR16C6P', 'B3GNT6', 'IFNL1', 'PCGEM1', 'MAGEA12', 'POTEH', 'COX7B2', 'TCP10L2', 'CPA2', 'LINC00303', 'C2ORF27B', 'MAGEB3', 'PCP4', 'DEFB126', 'GFI1B', 'CTRB1', 'C1ORF146', 'UGT1A4', 'CNGA2', 'SLC22A10', 'DISC2', 'SPANXA2', 'INSM2', 'MTNR1B', 'LY6G6D', 'C15ORF32', 'TSPEAR-AS2', 'PRR32', 'TMPRSS11F', 'PRSS48', 'FAM24A', 'GABRR3', 'OR2A12', 'GML', 'TMEM132D', 'LINC00113', 'RNASE8', 'HIST2H2AB', 'ZSCAN10', 'LINC01591', 'NKX6-2', 'ABRA', 'GLTPD2', 'SNORA72', 'OR6B1', 'WFDC8', 'FBXW12', 'LINC00691', 'MOS', 'LOC284661', 'TRIM55', 'LINC01142', 'OR4A16', 'RBM46', 'TLX3', 'HYPM', 'TAAR9', 'OR4D10', 'CNTNAP4', 'CABS1', 'PRAMEF16', 'VWA5B1', 'CRYGB', 'SNORA2B', 'LINC00452', 'GCG', 'SNORA27', 'CFC1B', 'SCGB3A2', 'PRAMEF5', 'FAM170A', 'OR51T1', 'CGB2', 'GSC2', 'HIST1H3A', 'CCK', 'LRRTM1', 'AGXT2', 'ADRB3', 'AIRE', 'GSTA5', 'OR4D5', 'OR10AD1', 'DUXA', 'MCF2', 'KRTAP12-1', 'MS4A10', 'RPL3L', 'LOC643923', 'AADAC', 'DEFB123', 'OR5B17', 'SERPINB3', 'ANKRD20A20P', 'SNCB', 'MYF5', 'HMSD', 'MT1B', 'CST9L', 'EPGN', 'ZG16', 'SNORD15B', 'TRIM15', 'RHAG', 'GABRB1', 'CLRN1', 'TBC1D3P2', 'ART1', 'OR4D1', 'PRLHR', 'KRTAP10-11', 'GRK1', 'HYMAI', 'MYADML', 'BANF2', 'USP50', 'B3GALT1', 'NPSR1-AS1', 'HRK', 'INS-IGF2', 'NHLH2', 'PABPC1L2A', 'SLC5A2', 'FAM47C', 'TRIM49', 'OR5T2', 'CEACAM22P', 'AQP2', 'MMD2', 'APOA5', 'PACRG-AS1', 'UTS2R', 'PRSS57', 'LINC00523', 'SPINK14', 'MYH7', 'WFDC6', 'INS', 'IGFBP1', 'FAM19A1', 'IFNB1', 'TAS2R42', 'INSC', 'MUC13', 'KRTAP12-3', 'SLCO1B7', 'GHSR', 'CYP1A2', 'C1ORF140', 'SPINT3', 'TNFSF18', 'KLK9', 'STATH', 'KCNB2', 'FLJ25758', 'LINC00202-2', 'MAS1L', 'IFNL2', 'FOXR1', 'SNORA16A', 'IL31', 'MAGEA11', 'TNP2', 'LOC392196', 'SNORA68', 'SLITRK1', 'LOC285629', 'FAM138D', 'FAM138B', 'AMER3', 'F2', 'NPSR1', 'MRGPRX1', 'TAS2R13', 'CTRB2', 'LOC100130417', 'VCX3A', 'ACTR3BP2', 'FAM9B', 'LINC01105', 'KCNK18', 'CLEC4M', 'NMUR2', 'GOLGA2P6', 'ALAS2', 'OR52W1', 'OR52K2', 'ZNF735', 'OR7D4', 'OR10G8', 'SLC5A8', 'OR52N2', 'SFTPB', 'PSG4', 'AKR1C8P', 'SLC10A1', 'C3ORF30', 'CALHM3', 'PASD1', 'OR5H14', 'AWAT1', 'HIST1H3B', 'RNF151', 'OR5K1', 'OR6B2', 'ADCYAP1R1', 'OR52K1', 'CACNG3', 'SHH', 'CCER1', 'OTC', 'OR51B5', 'OR8G2', 'C4ORF50', 'HGC6.3', 'SDC4P', 'OR8H2', 'OR3A2', 'SHD', 'PDX1', 'ERC2-IT1', 'HAO1', 'KRTAP21-2', 'OR4C16', 'CLCA3P', 'VPREB1', 'LINC00052', 'SERPINA7', 'PRLH', 'TSNAX-DISC1', 'SKINTL', 'DSCR10', 'TSPAN16', 'LINC00597', 'CHRNA9', 'HTR1B', 'TMEM8C', 'PRAC1', 'HAVCR1', 'SLC38A8', 'LEUTX', 'F11', 'OR4X2', 'HNRNPCL1', 'FMO9P', 'C7ORF57', 'GPR61', 'NEUROG3', 'AHSG', 'PSG11', 'KRTAP7-1', 'GPHA2', 'DACH2', 'HSD52', 'BRINP3', 'ACSM2B', 'B4GALNT2', 'CALR3', 'SPATA45', 'PPAN-P2RY11', 'SLC4A9', 'POU4F2', 'UGT2B28', 'KRT32', 'SLC25A3P1', 'CCDC63', 'HS3ST4', 'NXNL1', 'SLC9C1', 'GOLGA6L1', 'CPNE6', 'RNF222', 'CELP', 'SSX2', 'ACTBL2', 'VGLL2', 'HPSE2', 'CD1B', 'CLRN1-AS1', 'KRTAP10-7', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 1.598009787385147e-15 NRMSE: 7.848385577256259e-16 MAPE: 4.946639197209981e-12 Pearson Correlation: 0.032507220630100114 Spearman Correlation: 0.045319823588638064 Coefficient of Determination: -2.889063777263963 RMSE: 0.8225341706599477 NRMSE: 0.30758714756462713 MAPE: 3182.7404821354226 Predictor: ElasticNet Pearson Correlation: 0.822498250730782 Spearman Correlation: 0.7909118454977829 Coefficient of Determination: 0.5886052305662661 RMSE: 0.2303503178538443 NRMSE: 0.11313310635717512 MAPE: 616.299952570352 Pearson Correlation: 0.1328955230887045 Spearman Correlation: 0.09490155101885334 Coefficient of Determination: -0.13358863079862648 RMSE: 0.4440778964329012 NRMSE: 0.16606319631767147 MAPE: 1975.3830869363892 Predictor: RandomForests Pearson Correlation: 0.655660247248159 Spearman Correlation: 0.5473302753382336 Coefficient of Determination: 0.17057607802484698 RMSE: 0.3270752722156201 NRMSE: 0.1606381180765287 MAPE: 263.1820126614958 Pearson Correlation: 0.11282257403463297 Spearman Correlation: 0.15266792936074583 Coefficient of Determination: -0.002600082728653863 RMSE: 0.41763345821822245 NRMSE: 0.1561742827508638 MAPE: 277.11260515386687 Protein: CDH3 x_train_column_count: 1007 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'BTNL3', 'F9', 'FAM183CP', 'LINC00111', 'KCNU1', 'LOC727924', 'CXORF51A', 'OR2M3', 'OR10T2', 'OR1S1', 'SOX1', 'SNORD15A', 'HBG1', 'OR10V1', 'FGF23', 'MS4A6E', 'WFDC5', 'GPR151', 'PRM3', 'SCGB1C1', 'CLEC6A', 'PRSS3P2', 'ASAP1-IT1', 'PPY', 'DNAJB8', 'CT47A11', 'TMEM252', 'OR10A5', 'MAGEB10', 'OR8S1', 'PSG7', 'SUN3', 'SPRR1B', 'PRAMEF8', 'CELA2B', 'PLA2G2F', 'CRYAA', 'KLHL40', 'OR2AG1', 'MC2R', 'USP26', 'HIST1H4F', 'DMBT1P1', 'OR8G5', 'OR10K1', 'NPPC', 'PSAPL1', 'SNORD89', 'SLC5A7', 'C1ORF87', 'ALOX12B', 'TUSC7', 'HBBP1', 'LOC391003', 'C15ORF43', 'SFTA3', 'CAPZA3', 'XAGE5', 'LOC391343', 'LINC00636', 'TBC1D28', 'KRT39', 'C20ORF173', 'C22ORF42', 'BMP10', 'SNORA34', 'IFITM5', 'SNORA70B', 'OR4S1', 'PIWIL3', 'C4ORF51', 'TAS2R60', 'CCKBR', 'OR5B2', 'CASC8', 'IQCF2', 'ARR3', 'KRTAP19-1', 'PROKR1', 'FMR1NB', 'NXF2B', 'ARHGAP36', 'P2RX3', 'TTTY15', 'OPN1MW', 'PPBPP1', 'CHODL-AS1', 'PF4', 'KHDC1L', 'LYZL6', 'TEX33', 'OR1B1', 'HBD', 'FAM153C', 'TKTL2', 'ANKRD18DP', 'MYBPHL', 'AKAP14', 'EDDM3A', 'SYT10', 'ACOT12', 'GAGE1', 'C11ORF94', 'CSH2', 'SERPINB4', 'BRDTP1', 'LGI3', 'PRB1', 'SNORA54', 'PRAP1', 'SNORA51', 'OR10S1', 'SFTPC', 'OTP', 'IGF2BP2-AS1', 'SPACA7', 'KCNQ1DN', 'DMRT1', 'YWHAEP7', 'CYP3A4', 'PRSS1', 'ZAR1L', 'C17ORF64', 'GAGE2D', 'FBP2', 'IFNA13', 'KRTAP19-3', 'SLC13A1', 'LHX9', 'CYP2W1', 'LINC00469', 'LOC646813', 'FOXE1', 'C9ORF135', 'OR4K2', 'OTOL1', 'HPD', 'OLIG1', 'PLET1', 'LCNL1', 'CRLF2', 'NEU2', 'GABRG3', 'FCAMR', 'CCDC166', 'SVOP', 'FERD3L', 'FDCSP', 'HAND1', 'NPHS2', 'GH1', 'FAM71C', 'C3ORF49', 'USP17L6P', 'XKR7', 'LINC01101', 'FAM27L', 'VRTN', 'SATB2-AS1', 'SCARNA20', 'CNTNAP5', 'ZFAT-AS1', 'ACSM2A', 'OLAH', 'PTF1A', 'C17ORF78', 'PRDM14', 'HOXC12', 'DNAJC5G', 'LCE1D', 'FMO6P', 'PISRT1', 'TMEM207', 'LINC00696', 'GDNF', 'OR13H1', 'CRNN', 'OR51I2', 'AVPR1B', 'CLDN22', 'SPANXN1', 'ZNF479', 'OR5H6', 'LPO', 'FGA', 'OR6M1', 'PRKAG3', 'OR4D6', 'OR7E24', 'CELA2A', 'IL26', 'HFE2', 'UCMA', 'SCGB1A1', 'OR1L1', 'PWRN2', 'SCN1A', 'MYBPC2', 'FTMT', 'BARHL2', 'OPRD1', 'GYS2', 'IVL', 'OR1K1', 'DEFB110', 'ADAM18', 'EPS8L3', 'CCKAR', 'LOC285627', 'HBZ', 'SLC1A6', 'KRTAP21-1', 'CER1', 'SBSN', 'GABRA6', 'LOC729609', 'PRG1', 'SERPINI2', 'CPLX3', 'FAM27B', 'LMNTD1', 'TFF2', 'CT45A1', 'OR4C12', 'OR4D2', 'SCARNA11', 'POM121L2', 'OR56B1', 'NKX2-1', 'CLCA4', 'HBG2', 'LINC00488', 'SNORA59B', 'OR8D4', 'CYP7A1', 'FOXN3-AS2', 'GBX2', 'GAGE2B', 'LINC00608', 'CGB8', 'OR2M4', 'OR52A4P', 'DRGX', 'HTR3E', 'SNORA38B', 'ANP32D', 'LYZL1', 'CCL24', 'HTR5A', 'SLITRK3', 'YIPF7', 'TSPY1', 'SLC25A31', 'RAX', 'ALLC', 'SYCN', 'SNORA44', 'TARM1', 'HMHB1', 'SLC35G3', 'TMEM88B', 'OR6C74', 'ALX4', 'SPACA3', 'LINC00923', 'A1CF', 'OR6F1', 'CD200R1L', 'SLC51B', 'TSPY2', 'FRMPD2B', 'OR9A2', 'KRT13', 'SNORD94', 'TSKS', 'OR8J3', 'NPBWR2', 'ARL5C', 'OR2T29', 'DYDC1', 'GDPD2', 'ARID3C', 'LINC00602', 'NKX2-6', 'LINC00934', 'OR11H4', 'GOLGA8EP', 'OR13C3', 'PLG', 'TRHR', 'LINC00895', 'MAP3K15', 'MAGEA9B', 'ITLN2', 'POU6F2', 'SRY', 'RAX2', 'OR1N1', 'LINC00575', 'SSX5', 'SNORA37', 'TPTE2', 'CNTN5', 'TCERG1L', 'DPPA2', 'NTS', 'ADGRG4', 'ZIM3', 'BMP15', 'ZCCHC13', 'POTED', 'MUSK', 'SNORA71A', 'KIR3DL3', 'LINC00304', 'KCNK4', 'GRIN2B', 'APOC3', 'IQCF3', 'C2ORF83', 'MYH1', 'C18ORF42', 'TRPM1', 'GPR22', 'IL36RN', 'ALPPL2', 'GAGE2C', 'GAGE12F', 'KCNMB2', 'SNORD116-19', 'TPD52L3', 'OR2L8', 'C20ORF166-AS1', 'NLRP8', 'SNORA74A', 'SNORA76C', 'OR2A14', 'OR4F15', 'CFHR4', 'OR2AT4', 'OR11H6', 'SPANXN3', 'CPLX4', 'SOX3', 'FAM170B', 'DAOA', 'CYP2C18', 'LINC01312', 'CSN3', 'EDDM3B', 'GUCA2B', 'ITIH1', 'USH1C', 'F13B', 'ZNF705A', 'FFAR1', 'GPR52', 'SYCP1', 'ARSF', 'EPPIN', 'DNMT3L', 'PRAMEF14', 'MUC2', 'MTVR2', 'LRRC30', 'SPATA31C1', 'MAGEA1', 'ADAM29', 'TRIM48', 'OR52N5', 'CXADRP2', 'BPIFB3', 'DUSP21', 'OR2T10', 'FAM205A', 'SLC32A1', 'DMP1', 'FOXD4L3', 'PPIAL4E', 'MMP23A', 'PSKH2', 'BTN1A1', 'OR5C1', 'C6ORF10', 'ACER1', 'NKAIN3', 'AATK-AS1', 'SPINK1', 'IFNA14', 'MORC1', 'TRIM75P', 'LOC647859', 'TTTY2', 'TMIGD1', 'SPOCK3', 'CHRNB3', 'BET1P1', 'GCSAML-AS1', 'CSNK1A1P1', 'OR2A2', 'SCARNA8', 'FAM19A4', 'ADGRG7', 'KRTAP4-3', 'OR9G4', 'TMEM72', 'CRYGC', 'PAGE5', 'ODAM', 'OR1S2', 'KRTAP1-5', 'REC114', 'KRTAP1-1', 'TREML4', 'IQCF6', 'TMEM14E', 'KRTAP12-2', 'PPY2P', 'ZFY', 'TSPAN19', 'IQCJ', 'KRT83', 'RFX6', 'PLA2G12B', 'DMRTC1', 'SNORD115-26', 'OR6C4', 'COL6A4P1', 'DCT', 'VWC2L', 'SH2D7', 'HCRTR1', 'NUTM1', 'OR52A5', 'KRT3', 'TPTE', 'REG4', 'AADACL3', 'OR2G6', 'CT47A1', 'CLEC4G', 'OR6S1', 'SNORA16B', 'CGB5', 'BTF3P11', 'SPATA3', 'MAGEA5', 'LINC01020', 'SPDYC', 'KLRC4', 'S100G', 'KRTAP11-1', 'RAPGEF4-AS1', 'LOC400736', 'NF1P2', 'NXPE1', 'KRT85', 'FRMPD4', 'TSGA13', 'RPE65', 'TRPV5', 'LOC100129935', 'ANKRD34C', 'EPB42', 'CA6', 'OR2F1', 'APCS', 'CHIAP2', 'FOXG1', 'KCNJ16', 'ASB15', 'IHH', 'AKR1D1', 'OACYLP', 'GNAS-AS1', 'KRT74', 'KRTAP3-2', 'LOC400940', 'SDR16C6P', 'B3GNT6', 'IFNL1', 'PCGEM1', 'MAGEA12', 'POTEH', 'COX7B2', 'TCP10L2', 'CPA2', 'LINC00303', 'C2ORF27B', 'MAGEB3', 'PCP4', 'DEFB126', 'GFI1B', 'CTRB1', 'C1ORF146', 'UGT1A4', 'CNGA2', 'SLC22A10', 'DISC2', 'SPANXA2', 'INSM2', 'MTNR1B', 'LY6G6D', 'C15ORF32', 'TSPEAR-AS2', 'PRR32', 'TMPRSS11F', 'PRSS48', 'FAM24A', 'GABRR3', 'OR2A12', 'GML', 'TMEM132D', 'LINC00113', 'RNASE8', 'HIST2H2AB', 'ZSCAN10', 'LINC01591', 'NKX6-2', 'ABRA', 'GLTPD2', 'SNORA72', 'OR6B1', 'WFDC8', 'FBXW12', 'LINC00691', 'MOS', 'LOC284661', 'TRIM55', 'LINC01142', 'OR4A16', 'RBM46', 'TLX3', 'HYPM', 'TAAR9', 'OR4D10', 'CNTNAP4', 'CABS1', 'PRAMEF16', 'VWA5B1', 'CRYGB', 'SNORA2B', 'LINC00452', 'GCG', 'SNORA27', 'CFC1B', 'SCGB3A2', 'PRAMEF5', 'FAM170A', 'OR51T1', 'CGB2', 'GSC2', 'HIST1H3A', 'CCK', 'LRRTM1', 'AGXT2', 'ADRB3', 'AIRE', 'GSTA5', 'OR4D5', 'OR10AD1', 'DUXA', 'MCF2', 'KRTAP12-1', 'MS4A10', 'RPL3L', 'LOC643923', 'AADAC', 'DEFB123', 'OR5B17', 'SERPINB3', 'ANKRD20A20P', 'SNCB', 'MYF5', 'HMSD', 'MT1B', 'CST9L', 'EPGN', 'ZG16', 'SNORD15B', 'TRIM15', 'RHAG', 'GABRB1', 'CLRN1', 'TBC1D3P2', 'ART1', 'OR4D1', 'PRLHR', 'KRTAP10-11', 'GRK1', 'HYMAI', 'MYADML', 'BANF2', 'USP50', 'B3GALT1', 'NPSR1-AS1', 'HRK', 'INS-IGF2', 'NHLH2', 'PABPC1L2A', 'SLC5A2', 'FAM47C', 'TRIM49', 'OR5T2', 'CEACAM22P', 'AQP2', 'MMD2', 'APOA5', 'PACRG-AS1', 'UTS2R', 'PRSS57', 'LINC00523', 'SPINK14', 'MYH7', 'WFDC6', 'INS', 'IGFBP1', 'FAM19A1', 'IFNB1', 'TAS2R42', 'INSC', 'MUC13', 'KRTAP12-3', 'SLCO1B7', 'GHSR', 'CYP1A2', 'C1ORF140', 'SPINT3', 'TNFSF18', 'KLK9', 'STATH', 'KCNB2', 'FLJ25758', 'LINC00202-2', 'MAS1L', 'IFNL2', 'FOXR1', 'SNORA16A', 'IL31', 'MAGEA11', 'TNP2', 'LOC392196', 'SNORA68', 'SLITRK1', 'LOC285629', 'FAM138D', 'FAM138B', 'AMER3', 'F2', 'NPSR1', 'MRGPRX1', 'TAS2R13', 'CTRB2', 'LOC100130417', 'VCX3A', 'ACTR3BP2', 'FAM9B', 'LINC01105', 'KCNK18', 'CLEC4M', 'NMUR2', 'GOLGA2P6', 'ALAS2', 'OR52W1', 'OR52K2', 'ZNF735', 'OR7D4', 'OR10G8', 'SLC5A8', 'OR52N2', 'SFTPB', 'PSG4', 'AKR1C8P', 'SLC10A1', 'C3ORF30', 'CALHM3', 'PASD1', 'OR5H14', 'AWAT1', 'HIST1H3B', 'RNF151', 'OR5K1', 'OR6B2', 'ADCYAP1R1', 'OR52K1', 'CACNG3', 'SHH', 'CCER1', 'OTC', 'OR51B5', 'OR8G2', 'C4ORF50', 'HGC6.3', 'SDC4P', 'OR8H2', 'OR3A2', 'SHD', 'PDX1', 'ERC2-IT1', 'HAO1', 'KRTAP21-2', 'OR4C16', 'CLCA3P', 'VPREB1', 'LINC00052', 'SERPINA7', 'PRLH', 'TSNAX-DISC1', 'SKINTL', 'DSCR10', 'TSPAN16', 'LINC00597', 'CHRNA9', 'HTR1B', 'TMEM8C', 'PRAC1', 'HAVCR1', 'SLC38A8', 'LEUTX', 'F11', 'OR4X2', 'HNRNPCL1', 'FMO9P', 'C7ORF57', 'GPR61', 'NEUROG3', 'AHSG', 'PSG11', 'KRTAP7-1', 'GPHA2', 'DACH2', 'HSD52', 'BRINP3', 'ACSM2B', 'B4GALNT2', 'CALR3', 'SPATA45', 'PPAN-P2RY11', 'SLC4A9', 'POU4F2', 'UGT2B28', 'KRT32', 'SLC25A3P1', 'CCDC63', 'HS3ST4', 'NXNL1', 'SLC9C1', 'GOLGA6L1', 'CPNE6', 'RNF222', 'CELP', 'SSX2', 'ACTBL2', 'VGLL2', 'HPSE2', 'CD1B', 'CLRN1-AS1', 'KRTAP10-7', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 8.994368313584958e-16 NRMSE: 6.310243246327215e-16 MAPE: 4.8509490723393105e-12 Pearson Correlation: 0.02990583968954857 Spearman Correlation: 0.11927580144390827 Coefficient of Determination: -6.377664745208778 RMSE: 0.6067745432440906 NRMSE: 0.5474377640037267 MAPE: 1055.3244156716096 Predictor: ElasticNet Pearson Correlation: 0.7159591191618778 Spearman Correlation: 0.647352387145902 Coefficient of Determination: 0.44254331020081483 RMSE: 0.15213918987350974 NRMSE: 0.10673737853841117 MAPE: 372.1239450745753 Pearson Correlation: 0.4248909309083557 Spearman Correlation: 0.41054127856955824 Coefficient of Determination: 0.1496894269208633 RMSE: 0.2059950021082047 NRMSE: 0.18585065013957605 MAPE: 152.0127771056086 Predictor: RandomForests Pearson Correlation: 0.6037267338815119 Spearman Correlation: 0.5708233050185336 Coefficient of Determination: 0.2679105110410972 RMSE: 0.17434826073003998 NRMSE: 0.12231875507243081 MAPE: 347.9073691676928 Pearson Correlation: 0.4529099130297428 Spearman Correlation: 0.4839237396975025 Coefficient of Determination: 0.15496019527607174 RMSE: 0.20535556532239282 NRMSE: 0.18527374418967404 MAPE: 160.1663924575447 Protein: PTEN x_train_column_count: 1007 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'BTNL3', 'F9', 'FAM183CP', 'LINC00111', 'KCNU1', 'LOC727924', 'CXORF51A', 'OR2M3', 'OR10T2', 'OR1S1', 'SOX1', 'SNORD15A', 'HBG1', 'OR10V1', 'FGF23', 'MS4A6E', 'WFDC5', 'GPR151', 'PRM3', 'SCGB1C1', 'CLEC6A', 'PRSS3P2', 'ASAP1-IT1', 'PPY', 'DNAJB8', 'CT47A11', 'TMEM252', 'OR10A5', 'MAGEB10', 'OR8S1', 'PSG7', 'SUN3', 'SPRR1B', 'PRAMEF8', 'CELA2B', 'PLA2G2F', 'CRYAA', 'KLHL40', 'OR2AG1', 'MC2R', 'USP26', 'HIST1H4F', 'DMBT1P1', 'OR8G5', 'OR10K1', 'NPPC', 'PSAPL1', 'SNORD89', 'SLC5A7', 'C1ORF87', 'ALOX12B', 'TUSC7', 'HBBP1', 'LOC391003', 'C15ORF43', 'SFTA3', 'CAPZA3', 'XAGE5', 'LOC391343', 'LINC00636', 'TBC1D28', 'KRT39', 'C20ORF173', 'C22ORF42', 'BMP10', 'SNORA34', 'IFITM5', 'SNORA70B', 'OR4S1', 'PIWIL3', 'C4ORF51', 'TAS2R60', 'CCKBR', 'OR5B2', 'CASC8', 'IQCF2', 'ARR3', 'KRTAP19-1', 'PROKR1', 'FMR1NB', 'NXF2B', 'ARHGAP36', 'P2RX3', 'TTTY15', 'OPN1MW', 'PPBPP1', 'CHODL-AS1', 'PF4', 'KHDC1L', 'LYZL6', 'TEX33', 'OR1B1', 'HBD', 'FAM153C', 'TKTL2', 'ANKRD18DP', 'MYBPHL', 'AKAP14', 'EDDM3A', 'SYT10', 'ACOT12', 'GAGE1', 'C11ORF94', 'CSH2', 'SERPINB4', 'BRDTP1', 'LGI3', 'PRB1', 'SNORA54', 'PRAP1', 'SNORA51', 'OR10S1', 'SFTPC', 'OTP', 'IGF2BP2-AS1', 'SPACA7', 'KCNQ1DN', 'DMRT1', 'YWHAEP7', 'CYP3A4', 'PRSS1', 'ZAR1L', 'C17ORF64', 'GAGE2D', 'FBP2', 'IFNA13', 'KRTAP19-3', 'SLC13A1', 'LHX9', 'CYP2W1', 'LINC00469', 'LOC646813', 'FOXE1', 'C9ORF135', 'OR4K2', 'OTOL1', 'HPD', 'OLIG1', 'PLET1', 'LCNL1', 'CRLF2', 'NEU2', 'GABRG3', 'FCAMR', 'CCDC166', 'SVOP', 'FERD3L', 'FDCSP', 'HAND1', 'NPHS2', 'GH1', 'FAM71C', 'C3ORF49', 'USP17L6P', 'XKR7', 'LINC01101', 'FAM27L', 'VRTN', 'SATB2-AS1', 'SCARNA20', 'CNTNAP5', 'ZFAT-AS1', 'ACSM2A', 'OLAH', 'PTF1A', 'C17ORF78', 'PRDM14', 'HOXC12', 'DNAJC5G', 'LCE1D', 'FMO6P', 'PISRT1', 'TMEM207', 'LINC00696', 'GDNF', 'OR13H1', 'CRNN', 'OR51I2', 'AVPR1B', 'CLDN22', 'SPANXN1', 'ZNF479', 'OR5H6', 'LPO', 'FGA', 'OR6M1', 'PRKAG3', 'OR4D6', 'OR7E24', 'CELA2A', 'IL26', 'HFE2', 'UCMA', 'SCGB1A1', 'OR1L1', 'PWRN2', 'SCN1A', 'MYBPC2', 'FTMT', 'BARHL2', 'OPRD1', 'GYS2', 'IVL', 'OR1K1', 'DEFB110', 'ADAM18', 'EPS8L3', 'CCKAR', 'LOC285627', 'HBZ', 'SLC1A6', 'KRTAP21-1', 'CER1', 'SBSN', 'GABRA6', 'LOC729609', 'PRG1', 'SERPINI2', 'CPLX3', 'FAM27B', 'LMNTD1', 'TFF2', 'CT45A1', 'OR4C12', 'OR4D2', 'SCARNA11', 'POM121L2', 'OR56B1', 'NKX2-1', 'CLCA4', 'HBG2', 'LINC00488', 'SNORA59B', 'OR8D4', 'CYP7A1', 'FOXN3-AS2', 'GBX2', 'GAGE2B', 'LINC00608', 'CGB8', 'OR2M4', 'OR52A4P', 'DRGX', 'HTR3E', 'SNORA38B', 'ANP32D', 'LYZL1', 'CCL24', 'HTR5A', 'SLITRK3', 'YIPF7', 'TSPY1', 'SLC25A31', 'RAX', 'ALLC', 'SYCN', 'SNORA44', 'TARM1', 'HMHB1', 'SLC35G3', 'TMEM88B', 'OR6C74', 'ALX4', 'SPACA3', 'LINC00923', 'A1CF', 'OR6F1', 'CD200R1L', 'SLC51B', 'TSPY2', 'FRMPD2B', 'OR9A2', 'KRT13', 'SNORD94', 'TSKS', 'OR8J3', 'NPBWR2', 'ARL5C', 'OR2T29', 'DYDC1', 'GDPD2', 'ARID3C', 'LINC00602', 'NKX2-6', 'LINC00934', 'OR11H4', 'GOLGA8EP', 'OR13C3', 'PLG', 'TRHR', 'LINC00895', 'MAP3K15', 'MAGEA9B', 'ITLN2', 'POU6F2', 'SRY', 'RAX2', 'OR1N1', 'LINC00575', 'SSX5', 'SNORA37', 'TPTE2', 'CNTN5', 'TCERG1L', 'DPPA2', 'NTS', 'ADGRG4', 'ZIM3', 'BMP15', 'ZCCHC13', 'POTED', 'MUSK', 'SNORA71A', 'KIR3DL3', 'LINC00304', 'KCNK4', 'GRIN2B', 'APOC3', 'IQCF3', 'C2ORF83', 'MYH1', 'C18ORF42', 'TRPM1', 'GPR22', 'IL36RN', 'ALPPL2', 'GAGE2C', 'GAGE12F', 'KCNMB2', 'SNORD116-19', 'TPD52L3', 'OR2L8', 'C20ORF166-AS1', 'NLRP8', 'SNORA74A', 'SNORA76C', 'OR2A14', 'OR4F15', 'CFHR4', 'OR2AT4', 'OR11H6', 'SPANXN3', 'CPLX4', 'SOX3', 'FAM170B', 'DAOA', 'CYP2C18', 'LINC01312', 'CSN3', 'EDDM3B', 'GUCA2B', 'ITIH1', 'USH1C', 'F13B', 'ZNF705A', 'FFAR1', 'GPR52', 'SYCP1', 'ARSF', 'EPPIN', 'DNMT3L', 'PRAMEF14', 'MUC2', 'MTVR2', 'LRRC30', 'SPATA31C1', 'MAGEA1', 'ADAM29', 'TRIM48', 'OR52N5', 'CXADRP2', 'BPIFB3', 'DUSP21', 'OR2T10', 'FAM205A', 'SLC32A1', 'DMP1', 'FOXD4L3', 'PPIAL4E', 'MMP23A', 'PSKH2', 'BTN1A1', 'OR5C1', 'C6ORF10', 'ACER1', 'NKAIN3', 'AATK-AS1', 'SPINK1', 'IFNA14', 'MORC1', 'TRIM75P', 'LOC647859', 'TTTY2', 'TMIGD1', 'SPOCK3', 'CHRNB3', 'BET1P1', 'GCSAML-AS1', 'CSNK1A1P1', 'OR2A2', 'SCARNA8', 'FAM19A4', 'ADGRG7', 'KRTAP4-3', 'OR9G4', 'TMEM72', 'CRYGC', 'PAGE5', 'ODAM', 'OR1S2', 'KRTAP1-5', 'REC114', 'KRTAP1-1', 'TREML4', 'IQCF6', 'TMEM14E', 'KRTAP12-2', 'PPY2P', 'ZFY', 'TSPAN19', 'IQCJ', 'KRT83', 'RFX6', 'PLA2G12B', 'DMRTC1', 'SNORD115-26', 'OR6C4', 'COL6A4P1', 'DCT', 'VWC2L', 'SH2D7', 'HCRTR1', 'NUTM1', 'OR52A5', 'KRT3', 'TPTE', 'REG4', 'AADACL3', 'OR2G6', 'CT47A1', 'CLEC4G', 'OR6S1', 'SNORA16B', 'CGB5', 'BTF3P11', 'SPATA3', 'MAGEA5', 'LINC01020', 'SPDYC', 'KLRC4', 'S100G', 'KRTAP11-1', 'RAPGEF4-AS1', 'LOC400736', 'NF1P2', 'NXPE1', 'KRT85', 'FRMPD4', 'TSGA13', 'RPE65', 'TRPV5', 'LOC100129935', 'ANKRD34C', 'EPB42', 'CA6', 'OR2F1', 'APCS', 'CHIAP2', 'FOXG1', 'KCNJ16', 'ASB15', 'IHH', 'AKR1D1', 'OACYLP', 'GNAS-AS1', 'KRT74', 'KRTAP3-2', 'LOC400940', 'SDR16C6P', 'B3GNT6', 'IFNL1', 'PCGEM1', 'MAGEA12', 'POTEH', 'COX7B2', 'TCP10L2', 'CPA2', 'LINC00303', 'C2ORF27B', 'MAGEB3', 'PCP4', 'DEFB126', 'GFI1B', 'CTRB1', 'C1ORF146', 'UGT1A4', 'CNGA2', 'SLC22A10', 'DISC2', 'SPANXA2', 'INSM2', 'MTNR1B', 'LY6G6D', 'C15ORF32', 'TSPEAR-AS2', 'PRR32', 'TMPRSS11F', 'PRSS48', 'FAM24A', 'GABRR3', 'OR2A12', 'GML', 'TMEM132D', 'LINC00113', 'RNASE8', 'HIST2H2AB', 'ZSCAN10', 'LINC01591', 'NKX6-2', 'ABRA', 'GLTPD2', 'SNORA72', 'OR6B1', 'WFDC8', 'FBXW12', 'LINC00691', 'MOS', 'LOC284661', 'TRIM55', 'LINC01142', 'OR4A16', 'RBM46', 'TLX3', 'HYPM', 'TAAR9', 'OR4D10', 'CNTNAP4', 'CABS1', 'PRAMEF16', 'VWA5B1', 'CRYGB', 'SNORA2B', 'LINC00452', 'GCG', 'SNORA27', 'CFC1B', 'SCGB3A2', 'PRAMEF5', 'FAM170A', 'OR51T1', 'CGB2', 'GSC2', 'HIST1H3A', 'CCK', 'LRRTM1', 'AGXT2', 'ADRB3', 'AIRE', 'GSTA5', 'OR4D5', 'OR10AD1', 'DUXA', 'MCF2', 'KRTAP12-1', 'MS4A10', 'RPL3L', 'LOC643923', 'AADAC', 'DEFB123', 'OR5B17', 'SERPINB3', 'ANKRD20A20P', 'SNCB', 'MYF5', 'HMSD', 'MT1B', 'CST9L', 'EPGN', 'ZG16', 'SNORD15B', 'TRIM15', 'RHAG', 'GABRB1', 'CLRN1', 'TBC1D3P2', 'ART1', 'OR4D1', 'PRLHR', 'KRTAP10-11', 'GRK1', 'HYMAI', 'MYADML', 'BANF2', 'USP50', 'B3GALT1', 'NPSR1-AS1', 'HRK', 'INS-IGF2', 'NHLH2', 'PABPC1L2A', 'SLC5A2', 'FAM47C', 'TRIM49', 'OR5T2', 'CEACAM22P', 'AQP2', 'MMD2', 'APOA5', 'PACRG-AS1', 'UTS2R', 'PRSS57', 'LINC00523', 'SPINK14', 'MYH7', 'WFDC6', 'INS', 'IGFBP1', 'FAM19A1', 'IFNB1', 'TAS2R42', 'INSC', 'MUC13', 'KRTAP12-3', 'SLCO1B7', 'GHSR', 'CYP1A2', 'C1ORF140', 'SPINT3', 'TNFSF18', 'KLK9', 'STATH', 'KCNB2', 'FLJ25758', 'LINC00202-2', 'MAS1L', 'IFNL2', 'FOXR1', 'SNORA16A', 'IL31', 'MAGEA11', 'TNP2', 'LOC392196', 'SNORA68', 'SLITRK1', 'LOC285629', 'FAM138D', 'FAM138B', 'AMER3', 'F2', 'NPSR1', 'MRGPRX1', 'TAS2R13', 'CTRB2', 'LOC100130417', 'VCX3A', 'ACTR3BP2', 'FAM9B', 'LINC01105', 'KCNK18', 'CLEC4M', 'NMUR2', 'GOLGA2P6', 'ALAS2', 'OR52W1', 'OR52K2', 'ZNF735', 'OR7D4', 'OR10G8', 'SLC5A8', 'OR52N2', 'SFTPB', 'PSG4', 'AKR1C8P', 'SLC10A1', 'C3ORF30', 'CALHM3', 'PASD1', 'OR5H14', 'AWAT1', 'HIST1H3B', 'RNF151', 'OR5K1', 'OR6B2', 'ADCYAP1R1', 'OR52K1', 'CACNG3', 'SHH', 'CCER1', 'OTC', 'OR51B5', 'OR8G2', 'C4ORF50', 'HGC6.3', 'SDC4P', 'OR8H2', 'OR3A2', 'SHD', 'PDX1', 'ERC2-IT1', 'HAO1', 'KRTAP21-2', 'OR4C16', 'CLCA3P', 'VPREB1', 'LINC00052', 'SERPINA7', 'PRLH', 'TSNAX-DISC1', 'SKINTL', 'DSCR10', 'TSPAN16', 'LINC00597', 'CHRNA9', 'HTR1B', 'TMEM8C', 'PRAC1', 'HAVCR1', 'SLC38A8', 'LEUTX', 'F11', 'OR4X2', 'HNRNPCL1', 'FMO9P', 'C7ORF57', 'GPR61', 'NEUROG3', 'AHSG', 'PSG11', 'KRTAP7-1', 'GPHA2', 'DACH2', 'HSD52', 'BRINP3', 'ACSM2B', 'B4GALNT2', 'CALR3', 'SPATA45', 'PPAN-P2RY11', 'SLC4A9', 'POU4F2', 'UGT2B28', 'KRT32', 'SLC25A3P1', 'CCDC63', 'HS3ST4', 'NXNL1', 'SLC9C1', 'GOLGA6L1', 'CPNE6', 'RNF222', 'CELP', 'SSX2', 'ACTBL2', 'VGLL2', 'HPSE2', 'CD1B', 'CLRN1-AS1', 'KRTAP10-7', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.4993048559117486e-15 NRMSE: 3.9079115876972066e-16 MAPE: 3.4242879521875746e-12 Pearson Correlation: 0.25213727051407037 Spearman Correlation: 0.25750695145824765 Coefficient of Determination: -1.6592238412721674 RMSE: 1.1768927392679285 NRMSE: 0.2276564413625674 MAPE: 885.2130271181301 Predictor: ElasticNet Pearson Correlation: 0.8830689583711792 Spearman Correlation: 0.8330906996384941 Coefficient of Determination: 0.7294778452912871 RMSE: 0.2959611676747627 NRMSE: 0.04627647059256707 MAPE: 222.45073462527893 Pearson Correlation: 0.43457217919716506 Spearman Correlation: 0.44107033753538083 Coefficient of Determination: 0.186135061657148 RMSE: 0.6510818746456453 NRMSE: 0.12594434282065253 MAPE: 394.19498323508 Predictor: RandomForests Pearson Correlation: 0.5637830590773297 Spearman Correlation: 0.5401621488629407 Coefficient of Determination: 0.2812491661315518 RMSE: 0.4824168781620231 NRMSE: 0.07543067440575765 MAPE: 291.6537264637701 Pearson Correlation: 0.4019799429437955 Spearman Correlation: 0.44775870023317005 Coefficient of Determination: 0.14053113847992316 RMSE: 0.6690745475112372 NRMSE: 0.12942481962071287 MAPE: 375.5355038590959 Protein: BRCA2 x_train_column_count: 1007 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'BTNL3', 'F9', 'FAM183CP', 'LINC00111', 'KCNU1', 'LOC727924', 'CXORF51A', 'OR2M3', 'OR10T2', 'OR1S1', 'SOX1', 'SNORD15A', 'HBG1', 'OR10V1', 'FGF23', 'MS4A6E', 'WFDC5', 'GPR151', 'PRM3', 'SCGB1C1', 'CLEC6A', 'PRSS3P2', 'ASAP1-IT1', 'PPY', 'DNAJB8', 'CT47A11', 'TMEM252', 'OR10A5', 'MAGEB10', 'OR8S1', 'PSG7', 'SUN3', 'SPRR1B', 'PRAMEF8', 'CELA2B', 'PLA2G2F', 'CRYAA', 'KLHL40', 'OR2AG1', 'MC2R', 'USP26', 'HIST1H4F', 'DMBT1P1', 'OR8G5', 'OR10K1', 'NPPC', 'PSAPL1', 'SNORD89', 'SLC5A7', 'C1ORF87', 'ALOX12B', 'TUSC7', 'HBBP1', 'LOC391003', 'C15ORF43', 'SFTA3', 'CAPZA3', 'XAGE5', 'LOC391343', 'LINC00636', 'TBC1D28', 'KRT39', 'C20ORF173', 'C22ORF42', 'BMP10', 'SNORA34', 'IFITM5', 'SNORA70B', 'OR4S1', 'PIWIL3', 'C4ORF51', 'TAS2R60', 'CCKBR', 'OR5B2', 'CASC8', 'IQCF2', 'ARR3', 'KRTAP19-1', 'PROKR1', 'FMR1NB', 'NXF2B', 'ARHGAP36', 'P2RX3', 'TTTY15', 'OPN1MW', 'PPBPP1', 'CHODL-AS1', 'PF4', 'KHDC1L', 'LYZL6', 'TEX33', 'OR1B1', 'HBD', 'FAM153C', 'TKTL2', 'ANKRD18DP', 'MYBPHL', 'AKAP14', 'EDDM3A', 'SYT10', 'ACOT12', 'GAGE1', 'C11ORF94', 'CSH2', 'SERPINB4', 'BRDTP1', 'LGI3', 'PRB1', 'SNORA54', 'PRAP1', 'SNORA51', 'OR10S1', 'SFTPC', 'OTP', 'IGF2BP2-AS1', 'SPACA7', 'KCNQ1DN', 'DMRT1', 'YWHAEP7', 'CYP3A4', 'PRSS1', 'ZAR1L', 'C17ORF64', 'GAGE2D', 'FBP2', 'IFNA13', 'KRTAP19-3', 'SLC13A1', 'LHX9', 'CYP2W1', 'LINC00469', 'LOC646813', 'FOXE1', 'C9ORF135', 'OR4K2', 'OTOL1', 'HPD', 'OLIG1', 'PLET1', 'LCNL1', 'CRLF2', 'NEU2', 'GABRG3', 'FCAMR', 'CCDC166', 'SVOP', 'FERD3L', 'FDCSP', 'HAND1', 'NPHS2', 'GH1', 'FAM71C', 'C3ORF49', 'USP17L6P', 'XKR7', 'LINC01101', 'FAM27L', 'VRTN', 'SATB2-AS1', 'SCARNA20', 'CNTNAP5', 'ZFAT-AS1', 'ACSM2A', 'OLAH', 'PTF1A', 'C17ORF78', 'PRDM14', 'HOXC12', 'DNAJC5G', 'LCE1D', 'FMO6P', 'PISRT1', 'TMEM207', 'LINC00696', 'GDNF', 'OR13H1', 'CRNN', 'OR51I2', 'AVPR1B', 'CLDN22', 'SPANXN1', 'ZNF479', 'OR5H6', 'LPO', 'FGA', 'OR6M1', 'PRKAG3', 'OR4D6', 'OR7E24', 'CELA2A', 'IL26', 'HFE2', 'UCMA', 'SCGB1A1', 'OR1L1', 'PWRN2', 'SCN1A', 'MYBPC2', 'FTMT', 'BARHL2', 'OPRD1', 'GYS2', 'IVL', 'OR1K1', 'DEFB110', 'ADAM18', 'EPS8L3', 'CCKAR', 'LOC285627', 'HBZ', 'SLC1A6', 'KRTAP21-1', 'CER1', 'SBSN', 'GABRA6', 'LOC729609', 'PRG1', 'SERPINI2', 'CPLX3', 'FAM27B', 'LMNTD1', 'TFF2', 'CT45A1', 'OR4C12', 'OR4D2', 'SCARNA11', 'POM121L2', 'OR56B1', 'NKX2-1', 'CLCA4', 'HBG2', 'LINC00488', 'SNORA59B', 'OR8D4', 'CYP7A1', 'FOXN3-AS2', 'GBX2', 'GAGE2B', 'LINC00608', 'CGB8', 'OR2M4', 'OR52A4P', 'DRGX', 'HTR3E', 'SNORA38B', 'ANP32D', 'LYZL1', 'CCL24', 'HTR5A', 'SLITRK3', 'YIPF7', 'TSPY1', 'SLC25A31', 'RAX', 'ALLC', 'SYCN', 'SNORA44', 'TARM1', 'HMHB1', 'SLC35G3', 'TMEM88B', 'OR6C74', 'ALX4', 'SPACA3', 'LINC00923', 'A1CF', 'OR6F1', 'CD200R1L', 'SLC51B', 'TSPY2', 'FRMPD2B', 'OR9A2', 'KRT13', 'SNORD94', 'TSKS', 'OR8J3', 'NPBWR2', 'ARL5C', 'OR2T29', 'DYDC1', 'GDPD2', 'ARID3C', 'LINC00602', 'NKX2-6', 'LINC00934', 'OR11H4', 'GOLGA8EP', 'OR13C3', 'PLG', 'TRHR', 'LINC00895', 'MAP3K15', 'MAGEA9B', 'ITLN2', 'POU6F2', 'SRY', 'RAX2', 'OR1N1', 'LINC00575', 'SSX5', 'SNORA37', 'TPTE2', 'CNTN5', 'TCERG1L', 'DPPA2', 'NTS', 'ADGRG4', 'ZIM3', 'BMP15', 'ZCCHC13', 'POTED', 'MUSK', 'SNORA71A', 'KIR3DL3', 'LINC00304', 'KCNK4', 'GRIN2B', 'APOC3', 'IQCF3', 'C2ORF83', 'MYH1', 'C18ORF42', 'TRPM1', 'GPR22', 'IL36RN', 'ALPPL2', 'GAGE2C', 'GAGE12F', 'KCNMB2', 'SNORD116-19', 'TPD52L3', 'OR2L8', 'C20ORF166-AS1', 'NLRP8', 'SNORA74A', 'SNORA76C', 'OR2A14', 'OR4F15', 'CFHR4', 'OR2AT4', 'OR11H6', 'SPANXN3', 'CPLX4', 'SOX3', 'FAM170B', 'DAOA', 'CYP2C18', 'LINC01312', 'CSN3', 'EDDM3B', 'GUCA2B', 'ITIH1', 'USH1C', 'F13B', 'ZNF705A', 'FFAR1', 'GPR52', 'SYCP1', 'ARSF', 'EPPIN', 'DNMT3L', 'PRAMEF14', 'MUC2', 'MTVR2', 'LRRC30', 'SPATA31C1', 'MAGEA1', 'ADAM29', 'TRIM48', 'OR52N5', 'CXADRP2', 'BPIFB3', 'DUSP21', 'OR2T10', 'FAM205A', 'SLC32A1', 'DMP1', 'FOXD4L3', 'PPIAL4E', 'MMP23A', 'PSKH2', 'BTN1A1', 'OR5C1', 'C6ORF10', 'ACER1', 'NKAIN3', 'AATK-AS1', 'SPINK1', 'IFNA14', 'MORC1', 'TRIM75P', 'LOC647859', 'TTTY2', 'TMIGD1', 'SPOCK3', 'CHRNB3', 'BET1P1', 'GCSAML-AS1', 'CSNK1A1P1', 'OR2A2', 'SCARNA8', 'FAM19A4', 'ADGRG7', 'KRTAP4-3', 'OR9G4', 'TMEM72', 'CRYGC', 'PAGE5', 'ODAM', 'OR1S2', 'KRTAP1-5', 'REC114', 'KRTAP1-1', 'TREML4', 'IQCF6', 'TMEM14E', 'KRTAP12-2', 'PPY2P', 'ZFY', 'TSPAN19', 'IQCJ', 'KRT83', 'RFX6', 'PLA2G12B', 'DMRTC1', 'SNORD115-26', 'OR6C4', 'COL6A4P1', 'DCT', 'VWC2L', 'SH2D7', 'HCRTR1', 'NUTM1', 'OR52A5', 'KRT3', 'TPTE', 'REG4', 'AADACL3', 'OR2G6', 'CT47A1', 'CLEC4G', 'OR6S1', 'SNORA16B', 'CGB5', 'BTF3P11', 'SPATA3', 'MAGEA5', 'LINC01020', 'SPDYC', 'KLRC4', 'S100G', 'KRTAP11-1', 'RAPGEF4-AS1', 'LOC400736', 'NF1P2', 'NXPE1', 'KRT85', 'FRMPD4', 'TSGA13', 'RPE65', 'TRPV5', 'LOC100129935', 'ANKRD34C', 'EPB42', 'CA6', 'OR2F1', 'APCS', 'CHIAP2', 'FOXG1', 'KCNJ16', 'ASB15', 'IHH', 'AKR1D1', 'OACYLP', 'GNAS-AS1', 'KRT74', 'KRTAP3-2', 'LOC400940', 'SDR16C6P', 'B3GNT6', 'IFNL1', 'PCGEM1', 'MAGEA12', 'POTEH', 'COX7B2', 'TCP10L2', 'CPA2', 'LINC00303', 'C2ORF27B', 'MAGEB3', 'PCP4', 'DEFB126', 'GFI1B', 'CTRB1', 'C1ORF146', 'UGT1A4', 'CNGA2', 'SLC22A10', 'DISC2', 'SPANXA2', 'INSM2', 'MTNR1B', 'LY6G6D', 'C15ORF32', 'TSPEAR-AS2', 'PRR32', 'TMPRSS11F', 'PRSS48', 'FAM24A', 'GABRR3', 'OR2A12', 'GML', 'TMEM132D', 'LINC00113', 'RNASE8', 'HIST2H2AB', 'ZSCAN10', 'LINC01591', 'NKX6-2', 'ABRA', 'GLTPD2', 'SNORA72', 'OR6B1', 'WFDC8', 'FBXW12', 'LINC00691', 'MOS', 'LOC284661', 'TRIM55', 'LINC01142', 'OR4A16', 'RBM46', 'TLX3', 'HYPM', 'TAAR9', 'OR4D10', 'CNTNAP4', 'CABS1', 'PRAMEF16', 'VWA5B1', 'CRYGB', 'SNORA2B', 'LINC00452', 'GCG', 'SNORA27', 'CFC1B', 'SCGB3A2', 'PRAMEF5', 'FAM170A', 'OR51T1', 'CGB2', 'GSC2', 'HIST1H3A', 'CCK', 'LRRTM1', 'AGXT2', 'ADRB3', 'AIRE', 'GSTA5', 'OR4D5', 'OR10AD1', 'DUXA', 'MCF2', 'KRTAP12-1', 'MS4A10', 'RPL3L', 'LOC643923', 'AADAC', 'DEFB123', 'OR5B17', 'SERPINB3', 'ANKRD20A20P', 'SNCB', 'MYF5', 'HMSD', 'MT1B', 'CST9L', 'EPGN', 'ZG16', 'SNORD15B', 'TRIM15', 'RHAG', 'GABRB1', 'CLRN1', 'TBC1D3P2', 'ART1', 'OR4D1', 'PRLHR', 'KRTAP10-11', 'GRK1', 'HYMAI', 'MYADML', 'BANF2', 'USP50', 'B3GALT1', 'NPSR1-AS1', 'HRK', 'INS-IGF2', 'NHLH2', 'PABPC1L2A', 'SLC5A2', 'FAM47C', 'TRIM49', 'OR5T2', 'CEACAM22P', 'AQP2', 'MMD2', 'APOA5', 'PACRG-AS1', 'UTS2R', 'PRSS57', 'LINC00523', 'SPINK14', 'MYH7', 'WFDC6', 'INS', 'IGFBP1', 'FAM19A1', 'IFNB1', 'TAS2R42', 'INSC', 'MUC13', 'KRTAP12-3', 'SLCO1B7', 'GHSR', 'CYP1A2', 'C1ORF140', 'SPINT3', 'TNFSF18', 'KLK9', 'STATH', 'KCNB2', 'FLJ25758', 'LINC00202-2', 'MAS1L', 'IFNL2', 'FOXR1', 'SNORA16A', 'IL31', 'MAGEA11', 'TNP2', 'LOC392196', 'SNORA68', 'SLITRK1', 'LOC285629', 'FAM138D', 'FAM138B', 'AMER3', 'F2', 'NPSR1', 'MRGPRX1', 'TAS2R13', 'CTRB2', 'LOC100130417', 'VCX3A', 'ACTR3BP2', 'FAM9B', 'LINC01105', 'KCNK18', 'CLEC4M', 'NMUR2', 'GOLGA2P6', 'ALAS2', 'OR52W1', 'OR52K2', 'ZNF735', 'OR7D4', 'OR10G8', 'SLC5A8', 'OR52N2', 'SFTPB', 'PSG4', 'AKR1C8P', 'SLC10A1', 'C3ORF30', 'CALHM3', 'PASD1', 'OR5H14', 'AWAT1', 'HIST1H3B', 'RNF151', 'OR5K1', 'OR6B2', 'ADCYAP1R1', 'OR52K1', 'CACNG3', 'SHH', 'CCER1', 'OTC', 'OR51B5', 'OR8G2', 'C4ORF50', 'HGC6.3', 'SDC4P', 'OR8H2', 'OR3A2', 'SHD', 'PDX1', 'ERC2-IT1', 'HAO1', 'KRTAP21-2', 'OR4C16', 'CLCA3P', 'VPREB1', 'LINC00052', 'SERPINA7', 'PRLH', 'TSNAX-DISC1', 'SKINTL', 'DSCR10', 'TSPAN16', 'LINC00597', 'CHRNA9', 'HTR1B', 'TMEM8C', 'PRAC1', 'HAVCR1', 'SLC38A8', 'LEUTX', 'F11', 'OR4X2', 'HNRNPCL1', 'FMO9P', 'C7ORF57', 'GPR61', 'NEUROG3', 'AHSG', 'PSG11', 'KRTAP7-1', 'GPHA2', 'DACH2', 'HSD52', 'BRINP3', 'ACSM2B', 'B4GALNT2', 'CALR3', 'SPATA45', 'PPAN-P2RY11', 'SLC4A9', 'POU4F2', 'UGT2B28', 'KRT32', 'SLC25A3P1', 'CCDC63', 'HS3ST4', 'NXNL1', 'SLC9C1', 'GOLGA6L1', 'CPNE6', 'RNF222', 'CELP', 'SSX2', 'ACTBL2', 'VGLL2', 'HPSE2', 'CD1B', 'CLRN1-AS1', 'KRTAP10-7', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999884408153 Coefficient of Determination: 1.0 RMSE: 9.344186336525273e-16 NRMSE: 6.019768939620083e-16 MAPE: 3.650725062460537e-12 Pearson Correlation: 0.10311946738767441 Spearman Correlation: 0.04437711193406402 Coefficient of Determination: -5.101034898055086 RMSE: 0.4102407955379659 NRMSE: 0.5365079389759574 MAPE: 606.5082868899633 Predictor: ElasticNet Pearson Correlation: 0.7075422875474339 Spearman Correlation: 0.5949168251109934 Coefficient of Determination: 0.3963551149902196 RMSE: 0.15575294072322146 NRMSE: 0.10034011320548976 MAPE: 128.4950320560349 Pearson Correlation: 0.1593371622707231 Spearman Correlation: 0.050596640855871025 Coefficient of Determination: -0.09146337747921374 RMSE: 0.17351685807691503 NRMSE: 0.226923243414523 MAPE: 133.6282053916535 Predictor: RandomForests Pearson Correlation: 0.5729315081626841 Spearman Correlation: 0.5038678575504594 Coefficient of Determination: 0.14924738876661126 RMSE: 0.18490435414027817 NRMSE: 0.11912021526189608 MAPE: 112.96235926071874 Pearson Correlation: 0.12597253910758155 Spearman Correlation: 0.09811843040436913 Coefficient of Determination: -0.0782536288333211 RMSE: 0.1724636428895966 NRMSE: 0.2255458613608796 MAPE: 129.97085003455743 Protein: CDKN2A x_train_column_count: 1007 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'BTNL3', 'F9', 'FAM183CP', 'LINC00111', 'KCNU1', 'LOC727924', 'CXORF51A', 'OR2M3', 'OR10T2', 'OR1S1', 'SOX1', 'SNORD15A', 'HBG1', 'OR10V1', 'FGF23', 'MS4A6E', 'WFDC5', 'GPR151', 'PRM3', 'SCGB1C1', 'CLEC6A', 'PRSS3P2', 'ASAP1-IT1', 'PPY', 'DNAJB8', 'CT47A11', 'TMEM252', 'OR10A5', 'MAGEB10', 'OR8S1', 'PSG7', 'SUN3', 'SPRR1B', 'PRAMEF8', 'CELA2B', 'PLA2G2F', 'CRYAA', 'KLHL40', 'OR2AG1', 'MC2R', 'USP26', 'HIST1H4F', 'DMBT1P1', 'OR8G5', 'OR10K1', 'NPPC', 'PSAPL1', 'SNORD89', 'SLC5A7', 'C1ORF87', 'ALOX12B', 'TUSC7', 'HBBP1', 'LOC391003', 'C15ORF43', 'SFTA3', 'CAPZA3', 'XAGE5', 'LOC391343', 'LINC00636', 'TBC1D28', 'KRT39', 'C20ORF173', 'C22ORF42', 'BMP10', 'SNORA34', 'IFITM5', 'SNORA70B', 'OR4S1', 'PIWIL3', 'C4ORF51', 'TAS2R60', 'CCKBR', 'OR5B2', 'CASC8', 'IQCF2', 'ARR3', 'KRTAP19-1', 'PROKR1', 'FMR1NB', 'NXF2B', 'ARHGAP36', 'P2RX3', 'TTTY15', 'OPN1MW', 'PPBPP1', 'CHODL-AS1', 'PF4', 'KHDC1L', 'LYZL6', 'TEX33', 'OR1B1', 'HBD', 'FAM153C', 'TKTL2', 'ANKRD18DP', 'MYBPHL', 'AKAP14', 'EDDM3A', 'SYT10', 'ACOT12', 'GAGE1', 'C11ORF94', 'CSH2', 'SERPINB4', 'BRDTP1', 'LGI3', 'PRB1', 'SNORA54', 'PRAP1', 'SNORA51', 'OR10S1', 'SFTPC', 'OTP', 'IGF2BP2-AS1', 'SPACA7', 'KCNQ1DN', 'DMRT1', 'YWHAEP7', 'CYP3A4', 'PRSS1', 'ZAR1L', 'C17ORF64', 'GAGE2D', 'FBP2', 'IFNA13', 'KRTAP19-3', 'SLC13A1', 'LHX9', 'CYP2W1', 'LINC00469', 'LOC646813', 'FOXE1', 'C9ORF135', 'OR4K2', 'OTOL1', 'HPD', 'OLIG1', 'PLET1', 'LCNL1', 'CRLF2', 'NEU2', 'GABRG3', 'FCAMR', 'CCDC166', 'SVOP', 'FERD3L', 'FDCSP', 'HAND1', 'NPHS2', 'GH1', 'FAM71C', 'C3ORF49', 'USP17L6P', 'XKR7', 'LINC01101', 'FAM27L', 'VRTN', 'SATB2-AS1', 'SCARNA20', 'CNTNAP5', 'ZFAT-AS1', 'ACSM2A', 'OLAH', 'PTF1A', 'C17ORF78', 'PRDM14', 'HOXC12', 'DNAJC5G', 'LCE1D', 'FMO6P', 'PISRT1', 'TMEM207', 'LINC00696', 'GDNF', 'OR13H1', 'CRNN', 'OR51I2', 'AVPR1B', 'CLDN22', 'SPANXN1', 'ZNF479', 'OR5H6', 'LPO', 'FGA', 'OR6M1', 'PRKAG3', 'OR4D6', 'OR7E24', 'CELA2A', 'IL26', 'HFE2', 'UCMA', 'SCGB1A1', 'OR1L1', 'PWRN2', 'SCN1A', 'MYBPC2', 'FTMT', 'BARHL2', 'OPRD1', 'GYS2', 'IVL', 'OR1K1', 'DEFB110', 'ADAM18', 'EPS8L3', 'CCKAR', 'LOC285627', 'HBZ', 'SLC1A6', 'KRTAP21-1', 'CER1', 'SBSN', 'GABRA6', 'LOC729609', 'PRG1', 'SERPINI2', 'CPLX3', 'FAM27B', 'LMNTD1', 'TFF2', 'CT45A1', 'OR4C12', 'OR4D2', 'SCARNA11', 'POM121L2', 'OR56B1', 'NKX2-1', 'CLCA4', 'HBG2', 'LINC00488', 'SNORA59B', 'OR8D4', 'CYP7A1', 'FOXN3-AS2', 'GBX2', 'GAGE2B', 'LINC00608', 'CGB8', 'OR2M4', 'OR52A4P', 'DRGX', 'HTR3E', 'SNORA38B', 'ANP32D', 'LYZL1', 'CCL24', 'HTR5A', 'SLITRK3', 'YIPF7', 'TSPY1', 'SLC25A31', 'RAX', 'ALLC', 'SYCN', 'SNORA44', 'TARM1', 'HMHB1', 'SLC35G3', 'TMEM88B', 'OR6C74', 'ALX4', 'SPACA3', 'LINC00923', 'A1CF', 'OR6F1', 'CD200R1L', 'SLC51B', 'TSPY2', 'FRMPD2B', 'OR9A2', 'KRT13', 'SNORD94', 'TSKS', 'OR8J3', 'NPBWR2', 'ARL5C', 'OR2T29', 'DYDC1', 'GDPD2', 'ARID3C', 'LINC00602', 'NKX2-6', 'LINC00934', 'OR11H4', 'GOLGA8EP', 'OR13C3', 'PLG', 'TRHR', 'LINC00895', 'MAP3K15', 'MAGEA9B', 'ITLN2', 'POU6F2', 'SRY', 'RAX2', 'OR1N1', 'LINC00575', 'SSX5', 'SNORA37', 'TPTE2', 'CNTN5', 'TCERG1L', 'DPPA2', 'NTS', 'ADGRG4', 'ZIM3', 'BMP15', 'ZCCHC13', 'POTED', 'MUSK', 'SNORA71A', 'KIR3DL3', 'LINC00304', 'KCNK4', 'GRIN2B', 'APOC3', 'IQCF3', 'C2ORF83', 'MYH1', 'C18ORF42', 'TRPM1', 'GPR22', 'IL36RN', 'ALPPL2', 'GAGE2C', 'GAGE12F', 'KCNMB2', 'SNORD116-19', 'TPD52L3', 'OR2L8', 'C20ORF166-AS1', 'NLRP8', 'SNORA74A', 'SNORA76C', 'OR2A14', 'OR4F15', 'CFHR4', 'OR2AT4', 'OR11H6', 'SPANXN3', 'CPLX4', 'SOX3', 'FAM170B', 'DAOA', 'CYP2C18', 'LINC01312', 'CSN3', 'EDDM3B', 'GUCA2B', 'ITIH1', 'USH1C', 'F13B', 'ZNF705A', 'FFAR1', 'GPR52', 'SYCP1', 'ARSF', 'EPPIN', 'DNMT3L', 'PRAMEF14', 'MUC2', 'MTVR2', 'LRRC30', 'SPATA31C1', 'MAGEA1', 'ADAM29', 'TRIM48', 'OR52N5', 'CXADRP2', 'BPIFB3', 'DUSP21', 'OR2T10', 'FAM205A', 'SLC32A1', 'DMP1', 'FOXD4L3', 'PPIAL4E', 'MMP23A', 'PSKH2', 'BTN1A1', 'OR5C1', 'C6ORF10', 'ACER1', 'NKAIN3', 'AATK-AS1', 'SPINK1', 'IFNA14', 'MORC1', 'TRIM75P', 'LOC647859', 'TTTY2', 'TMIGD1', 'SPOCK3', 'CHRNB3', 'BET1P1', 'GCSAML-AS1', 'CSNK1A1P1', 'OR2A2', 'SCARNA8', 'FAM19A4', 'ADGRG7', 'KRTAP4-3', 'OR9G4', 'TMEM72', 'CRYGC', 'PAGE5', 'ODAM', 'OR1S2', 'KRTAP1-5', 'REC114', 'KRTAP1-1', 'TREML4', 'IQCF6', 'TMEM14E', 'KRTAP12-2', 'PPY2P', 'ZFY', 'TSPAN19', 'IQCJ', 'KRT83', 'RFX6', 'PLA2G12B', 'DMRTC1', 'SNORD115-26', 'OR6C4', 'COL6A4P1', 'DCT', 'VWC2L', 'SH2D7', 'HCRTR1', 'NUTM1', 'OR52A5', 'KRT3', 'TPTE', 'REG4', 'AADACL3', 'OR2G6', 'CT47A1', 'CLEC4G', 'OR6S1', 'SNORA16B', 'CGB5', 'BTF3P11', 'SPATA3', 'MAGEA5', 'LINC01020', 'SPDYC', 'KLRC4', 'S100G', 'KRTAP11-1', 'RAPGEF4-AS1', 'LOC400736', 'NF1P2', 'NXPE1', 'KRT85', 'FRMPD4', 'TSGA13', 'RPE65', 'TRPV5', 'LOC100129935', 'ANKRD34C', 'EPB42', 'CA6', 'OR2F1', 'APCS', 'CHIAP2', 'FOXG1', 'KCNJ16', 'ASB15', 'IHH', 'AKR1D1', 'OACYLP', 'GNAS-AS1', 'KRT74', 'KRTAP3-2', 'LOC400940', 'SDR16C6P', 'B3GNT6', 'IFNL1', 'PCGEM1', 'MAGEA12', 'POTEH', 'COX7B2', 'TCP10L2', 'CPA2', 'LINC00303', 'C2ORF27B', 'MAGEB3', 'PCP4', 'DEFB126', 'GFI1B', 'CTRB1', 'C1ORF146', 'UGT1A4', 'CNGA2', 'SLC22A10', 'DISC2', 'SPANXA2', 'INSM2', 'MTNR1B', 'LY6G6D', 'C15ORF32', 'TSPEAR-AS2', 'PRR32', 'TMPRSS11F', 'PRSS48', 'FAM24A', 'GABRR3', 'OR2A12', 'GML', 'TMEM132D', 'LINC00113', 'RNASE8', 'HIST2H2AB', 'ZSCAN10', 'LINC01591', 'NKX6-2', 'ABRA', 'GLTPD2', 'SNORA72', 'OR6B1', 'WFDC8', 'FBXW12', 'LINC00691', 'MOS', 'LOC284661', 'TRIM55', 'LINC01142', 'OR4A16', 'RBM46', 'TLX3', 'HYPM', 'TAAR9', 'OR4D10', 'CNTNAP4', 'CABS1', 'PRAMEF16', 'VWA5B1', 'CRYGB', 'SNORA2B', 'LINC00452', 'GCG', 'SNORA27', 'CFC1B', 'SCGB3A2', 'PRAMEF5', 'FAM170A', 'OR51T1', 'CGB2', 'GSC2', 'HIST1H3A', 'CCK', 'LRRTM1', 'AGXT2', 'ADRB3', 'AIRE', 'GSTA5', 'OR4D5', 'OR10AD1', 'DUXA', 'MCF2', 'KRTAP12-1', 'MS4A10', 'RPL3L', 'LOC643923', 'AADAC', 'DEFB123', 'OR5B17', 'SERPINB3', 'ANKRD20A20P', 'SNCB', 'MYF5', 'HMSD', 'MT1B', 'CST9L', 'EPGN', 'ZG16', 'SNORD15B', 'TRIM15', 'RHAG', 'GABRB1', 'CLRN1', 'TBC1D3P2', 'ART1', 'OR4D1', 'PRLHR', 'KRTAP10-11', 'GRK1', 'HYMAI', 'MYADML', 'BANF2', 'USP50', 'B3GALT1', 'NPSR1-AS1', 'HRK', 'INS-IGF2', 'NHLH2', 'PABPC1L2A', 'SLC5A2', 'FAM47C', 'TRIM49', 'OR5T2', 'CEACAM22P', 'AQP2', 'MMD2', 'APOA5', 'PACRG-AS1', 'UTS2R', 'PRSS57', 'LINC00523', 'SPINK14', 'MYH7', 'WFDC6', 'INS', 'IGFBP1', 'FAM19A1', 'IFNB1', 'TAS2R42', 'INSC', 'MUC13', 'KRTAP12-3', 'SLCO1B7', 'GHSR', 'CYP1A2', 'C1ORF140', 'SPINT3', 'TNFSF18', 'KLK9', 'STATH', 'KCNB2', 'FLJ25758', 'LINC00202-2', 'MAS1L', 'IFNL2', 'FOXR1', 'SNORA16A', 'IL31', 'MAGEA11', 'TNP2', 'LOC392196', 'SNORA68', 'SLITRK1', 'LOC285629', 'FAM138D', 'FAM138B', 'AMER3', 'F2', 'NPSR1', 'MRGPRX1', 'TAS2R13', 'CTRB2', 'LOC100130417', 'VCX3A', 'ACTR3BP2', 'FAM9B', 'LINC01105', 'KCNK18', 'CLEC4M', 'NMUR2', 'GOLGA2P6', 'ALAS2', 'OR52W1', 'OR52K2', 'ZNF735', 'OR7D4', 'OR10G8', 'SLC5A8', 'OR52N2', 'SFTPB', 'PSG4', 'AKR1C8P', 'SLC10A1', 'C3ORF30', 'CALHM3', 'PASD1', 'OR5H14', 'AWAT1', 'HIST1H3B', 'RNF151', 'OR5K1', 'OR6B2', 'ADCYAP1R1', 'OR52K1', 'CACNG3', 'SHH', 'CCER1', 'OTC', 'OR51B5', 'OR8G2', 'C4ORF50', 'HGC6.3', 'SDC4P', 'OR8H2', 'OR3A2', 'SHD', 'PDX1', 'ERC2-IT1', 'HAO1', 'KRTAP21-2', 'OR4C16', 'CLCA3P', 'VPREB1', 'LINC00052', 'SERPINA7', 'PRLH', 'TSNAX-DISC1', 'SKINTL', 'DSCR10', 'TSPAN16', 'LINC00597', 'CHRNA9', 'HTR1B', 'TMEM8C', 'PRAC1', 'HAVCR1', 'SLC38A8', 'LEUTX', 'F11', 'OR4X2', 'HNRNPCL1', 'FMO9P', 'C7ORF57', 'GPR61', 'NEUROG3', 'AHSG', 'PSG11', 'KRTAP7-1', 'GPHA2', 'DACH2', 'HSD52', 'BRINP3', 'ACSM2B', 'B4GALNT2', 'CALR3', 'SPATA45', 'PPAN-P2RY11', 'SLC4A9', 'POU4F2', 'UGT2B28', 'KRT32', 'SLC25A3P1', 'CCDC63', 'HS3ST4', 'NXNL1', 'SLC9C1', 'GOLGA6L1', 'CPNE6', 'RNF222', 'CELP', 'SSX2', 'ACTBL2', 'VGLL2', 'HPSE2', 'CD1B', 'CLRN1-AS1', 'KRTAP10-7', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.3935825051241423e-15 NRMSE: 6.09503833649294e-16 MAPE: 2.091104223403785e-12 Pearson Correlation: 0.14591690871366114 Spearman Correlation: 0.15820895522388062 Coefficient of Determination: -1.774262426163539 RMSE: 1.0092765583566576 NRMSE: 0.2539635535987161 MAPE: 745.7031083092844 Predictor: ElasticNet Pearson Correlation: 0.9055431962347761 Spearman Correlation: 0.8914284373420364 Coefficient of Determination: 0.79338523654409 RMSE: 0.30895123537008556 NRMSE: 0.07867159872936405 MAPE: 185.1482142092596 Pearson Correlation: 0.26348156285827773 Spearman Correlation: 0.2878315190962481 Coefficient of Determination: -0.038325013353040616 RMSE: 0.617451819243184 NRMSE: 0.155368968884322 MAPE: 549.2718832959561 Predictor: RandomForests Pearson Correlation: 0.6915381307029589 Spearman Correlation: 0.5959723540932916 Coefficient of Determination: 0.47640720354867594 RMSE: 0.4918198945973006 NRMSE: 0.1252374257333148 MAPE: 250.34597764095915 Pearson Correlation: 0.37666733462433755 Spearman Correlation: 0.34390483887270584 Coefficient of Determination: -0.0741544973397521 RMSE: 0.6280146747230737 NRMSE: 0.15802689281172436 MAPE: 520.0448248611511 Protein: TP53 x_train_column_count: 1007 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'BTNL3', 'F9', 'FAM183CP', 'LINC00111', 'KCNU1', 'LOC727924', 'CXORF51A', 'OR2M3', 'OR10T2', 'OR1S1', 'SOX1', 'SNORD15A', 'HBG1', 'OR10V1', 'FGF23', 'MS4A6E', 'WFDC5', 'GPR151', 'PRM3', 'SCGB1C1', 'CLEC6A', 'PRSS3P2', 'ASAP1-IT1', 'PPY', 'DNAJB8', 'CT47A11', 'TMEM252', 'OR10A5', 'MAGEB10', 'OR8S1', 'PSG7', 'SUN3', 'SPRR1B', 'PRAMEF8', 'CELA2B', 'PLA2G2F', 'CRYAA', 'KLHL40', 'OR2AG1', 'MC2R', 'USP26', 'HIST1H4F', 'DMBT1P1', 'OR8G5', 'OR10K1', 'NPPC', 'PSAPL1', 'SNORD89', 'SLC5A7', 'C1ORF87', 'ALOX12B', 'TUSC7', 'HBBP1', 'LOC391003', 'C15ORF43', 'SFTA3', 'CAPZA3', 'XAGE5', 'LOC391343', 'LINC00636', 'TBC1D28', 'KRT39', 'C20ORF173', 'C22ORF42', 'BMP10', 'SNORA34', 'IFITM5', 'SNORA70B', 'OR4S1', 'PIWIL3', 'C4ORF51', 'TAS2R60', 'CCKBR', 'OR5B2', 'CASC8', 'IQCF2', 'ARR3', 'KRTAP19-1', 'PROKR1', 'FMR1NB', 'NXF2B', 'ARHGAP36', 'P2RX3', 'TTTY15', 'OPN1MW', 'PPBPP1', 'CHODL-AS1', 'PF4', 'KHDC1L', 'LYZL6', 'TEX33', 'OR1B1', 'HBD', 'FAM153C', 'TKTL2', 'ANKRD18DP', 'MYBPHL', 'AKAP14', 'EDDM3A', 'SYT10', 'ACOT12', 'GAGE1', 'C11ORF94', 'CSH2', 'SERPINB4', 'BRDTP1', 'LGI3', 'PRB1', 'SNORA54', 'PRAP1', 'SNORA51', 'OR10S1', 'SFTPC', 'OTP', 'IGF2BP2-AS1', 'SPACA7', 'KCNQ1DN', 'DMRT1', 'YWHAEP7', 'CYP3A4', 'PRSS1', 'ZAR1L', 'C17ORF64', 'GAGE2D', 'FBP2', 'IFNA13', 'KRTAP19-3', 'SLC13A1', 'LHX9', 'CYP2W1', 'LINC00469', 'LOC646813', 'FOXE1', 'C9ORF135', 'OR4K2', 'OTOL1', 'HPD', 'OLIG1', 'PLET1', 'LCNL1', 'CRLF2', 'NEU2', 'GABRG3', 'FCAMR', 'CCDC166', 'SVOP', 'FERD3L', 'FDCSP', 'HAND1', 'NPHS2', 'GH1', 'FAM71C', 'C3ORF49', 'USP17L6P', 'XKR7', 'LINC01101', 'FAM27L', 'VRTN', 'SATB2-AS1', 'SCARNA20', 'CNTNAP5', 'ZFAT-AS1', 'ACSM2A', 'OLAH', 'PTF1A', 'C17ORF78', 'PRDM14', 'HOXC12', 'DNAJC5G', 'LCE1D', 'FMO6P', 'PISRT1', 'TMEM207', 'LINC00696', 'GDNF', 'OR13H1', 'CRNN', 'OR51I2', 'AVPR1B', 'CLDN22', 'SPANXN1', 'ZNF479', 'OR5H6', 'LPO', 'FGA', 'OR6M1', 'PRKAG3', 'OR4D6', 'OR7E24', 'CELA2A', 'IL26', 'HFE2', 'UCMA', 'SCGB1A1', 'OR1L1', 'PWRN2', 'SCN1A', 'MYBPC2', 'FTMT', 'BARHL2', 'OPRD1', 'GYS2', 'IVL', 'OR1K1', 'DEFB110', 'ADAM18', 'EPS8L3', 'CCKAR', 'LOC285627', 'HBZ', 'SLC1A6', 'KRTAP21-1', 'CER1', 'SBSN', 'GABRA6', 'LOC729609', 'PRG1', 'SERPINI2', 'CPLX3', 'FAM27B', 'LMNTD1', 'TFF2', 'CT45A1', 'OR4C12', 'OR4D2', 'SCARNA11', 'POM121L2', 'OR56B1', 'NKX2-1', 'CLCA4', 'HBG2', 'LINC00488', 'SNORA59B', 'OR8D4', 'CYP7A1', 'FOXN3-AS2', 'GBX2', 'GAGE2B', 'LINC00608', 'CGB8', 'OR2M4', 'OR52A4P', 'DRGX', 'HTR3E', 'SNORA38B', 'ANP32D', 'LYZL1', 'CCL24', 'HTR5A', 'SLITRK3', 'YIPF7', 'TSPY1', 'SLC25A31', 'RAX', 'ALLC', 'SYCN', 'SNORA44', 'TARM1', 'HMHB1', 'SLC35G3', 'TMEM88B', 'OR6C74', 'ALX4', 'SPACA3', 'LINC00923', 'A1CF', 'OR6F1', 'CD200R1L', 'SLC51B', 'TSPY2', 'FRMPD2B', 'OR9A2', 'KRT13', 'SNORD94', 'TSKS', 'OR8J3', 'NPBWR2', 'ARL5C', 'OR2T29', 'DYDC1', 'GDPD2', 'ARID3C', 'LINC00602', 'NKX2-6', 'LINC00934', 'OR11H4', 'GOLGA8EP', 'OR13C3', 'PLG', 'TRHR', 'LINC00895', 'MAP3K15', 'MAGEA9B', 'ITLN2', 'POU6F2', 'SRY', 'RAX2', 'OR1N1', 'LINC00575', 'SSX5', 'SNORA37', 'TPTE2', 'CNTN5', 'TCERG1L', 'DPPA2', 'NTS', 'ADGRG4', 'ZIM3', 'BMP15', 'ZCCHC13', 'POTED', 'MUSK', 'SNORA71A', 'KIR3DL3', 'LINC00304', 'KCNK4', 'GRIN2B', 'APOC3', 'IQCF3', 'C2ORF83', 'MYH1', 'C18ORF42', 'TRPM1', 'GPR22', 'IL36RN', 'ALPPL2', 'GAGE2C', 'GAGE12F', 'KCNMB2', 'SNORD116-19', 'TPD52L3', 'OR2L8', 'C20ORF166-AS1', 'NLRP8', 'SNORA74A', 'SNORA76C', 'OR2A14', 'OR4F15', 'CFHR4', 'OR2AT4', 'OR11H6', 'SPANXN3', 'CPLX4', 'SOX3', 'FAM170B', 'DAOA', 'CYP2C18', 'LINC01312', 'CSN3', 'EDDM3B', 'GUCA2B', 'ITIH1', 'USH1C', 'F13B', 'ZNF705A', 'FFAR1', 'GPR52', 'SYCP1', 'ARSF', 'EPPIN', 'DNMT3L', 'PRAMEF14', 'MUC2', 'MTVR2', 'LRRC30', 'SPATA31C1', 'MAGEA1', 'ADAM29', 'TRIM48', 'OR52N5', 'CXADRP2', 'BPIFB3', 'DUSP21', 'OR2T10', 'FAM205A', 'SLC32A1', 'DMP1', 'FOXD4L3', 'PPIAL4E', 'MMP23A', 'PSKH2', 'BTN1A1', 'OR5C1', 'C6ORF10', 'ACER1', 'NKAIN3', 'AATK-AS1', 'SPINK1', 'IFNA14', 'MORC1', 'TRIM75P', 'LOC647859', 'TTTY2', 'TMIGD1', 'SPOCK3', 'CHRNB3', 'BET1P1', 'GCSAML-AS1', 'CSNK1A1P1', 'OR2A2', 'SCARNA8', 'FAM19A4', 'ADGRG7', 'KRTAP4-3', 'OR9G4', 'TMEM72', 'CRYGC', 'PAGE5', 'ODAM', 'OR1S2', 'KRTAP1-5', 'REC114', 'KRTAP1-1', 'TREML4', 'IQCF6', 'TMEM14E', 'KRTAP12-2', 'PPY2P', 'ZFY', 'TSPAN19', 'IQCJ', 'KRT83', 'RFX6', 'PLA2G12B', 'DMRTC1', 'SNORD115-26', 'OR6C4', 'COL6A4P1', 'DCT', 'VWC2L', 'SH2D7', 'HCRTR1', 'NUTM1', 'OR52A5', 'KRT3', 'TPTE', 'REG4', 'AADACL3', 'OR2G6', 'CT47A1', 'CLEC4G', 'OR6S1', 'SNORA16B', 'CGB5', 'BTF3P11', 'SPATA3', 'MAGEA5', 'LINC01020', 'SPDYC', 'KLRC4', 'S100G', 'KRTAP11-1', 'RAPGEF4-AS1', 'LOC400736', 'NF1P2', 'NXPE1', 'KRT85', 'FRMPD4', 'TSGA13', 'RPE65', 'TRPV5', 'LOC100129935', 'ANKRD34C', 'EPB42', 'CA6', 'OR2F1', 'APCS', 'CHIAP2', 'FOXG1', 'KCNJ16', 'ASB15', 'IHH', 'AKR1D1', 'OACYLP', 'GNAS-AS1', 'KRT74', 'KRTAP3-2', 'LOC400940', 'SDR16C6P', 'B3GNT6', 'IFNL1', 'PCGEM1', 'MAGEA12', 'POTEH', 'COX7B2', 'TCP10L2', 'CPA2', 'LINC00303', 'C2ORF27B', 'MAGEB3', 'PCP4', 'DEFB126', 'GFI1B', 'CTRB1', 'C1ORF146', 'UGT1A4', 'CNGA2', 'SLC22A10', 'DISC2', 'SPANXA2', 'INSM2', 'MTNR1B', 'LY6G6D', 'C15ORF32', 'TSPEAR-AS2', 'PRR32', 'TMPRSS11F', 'PRSS48', 'FAM24A', 'GABRR3', 'OR2A12', 'GML', 'TMEM132D', 'LINC00113', 'RNASE8', 'HIST2H2AB', 'ZSCAN10', 'LINC01591', 'NKX6-2', 'ABRA', 'GLTPD2', 'SNORA72', 'OR6B1', 'WFDC8', 'FBXW12', 'LINC00691', 'MOS', 'LOC284661', 'TRIM55', 'LINC01142', 'OR4A16', 'RBM46', 'TLX3', 'HYPM', 'TAAR9', 'OR4D10', 'CNTNAP4', 'CABS1', 'PRAMEF16', 'VWA5B1', 'CRYGB', 'SNORA2B', 'LINC00452', 'GCG', 'SNORA27', 'CFC1B', 'SCGB3A2', 'PRAMEF5', 'FAM170A', 'OR51T1', 'CGB2', 'GSC2', 'HIST1H3A', 'CCK', 'LRRTM1', 'AGXT2', 'ADRB3', 'AIRE', 'GSTA5', 'OR4D5', 'OR10AD1', 'DUXA', 'MCF2', 'KRTAP12-1', 'MS4A10', 'RPL3L', 'LOC643923', 'AADAC', 'DEFB123', 'OR5B17', 'SERPINB3', 'ANKRD20A20P', 'SNCB', 'MYF5', 'HMSD', 'MT1B', 'CST9L', 'EPGN', 'ZG16', 'SNORD15B', 'TRIM15', 'RHAG', 'GABRB1', 'CLRN1', 'TBC1D3P2', 'ART1', 'OR4D1', 'PRLHR', 'KRTAP10-11', 'GRK1', 'HYMAI', 'MYADML', 'BANF2', 'USP50', 'B3GALT1', 'NPSR1-AS1', 'HRK', 'INS-IGF2', 'NHLH2', 'PABPC1L2A', 'SLC5A2', 'FAM47C', 'TRIM49', 'OR5T2', 'CEACAM22P', 'AQP2', 'MMD2', 'APOA5', 'PACRG-AS1', 'UTS2R', 'PRSS57', 'LINC00523', 'SPINK14', 'MYH7', 'WFDC6', 'INS', 'IGFBP1', 'FAM19A1', 'IFNB1', 'TAS2R42', 'INSC', 'MUC13', 'KRTAP12-3', 'SLCO1B7', 'GHSR', 'CYP1A2', 'C1ORF140', 'SPINT3', 'TNFSF18', 'KLK9', 'STATH', 'KCNB2', 'FLJ25758', 'LINC00202-2', 'MAS1L', 'IFNL2', 'FOXR1', 'SNORA16A', 'IL31', 'MAGEA11', 'TNP2', 'LOC392196', 'SNORA68', 'SLITRK1', 'LOC285629', 'FAM138D', 'FAM138B', 'AMER3', 'F2', 'NPSR1', 'MRGPRX1', 'TAS2R13', 'CTRB2', 'LOC100130417', 'VCX3A', 'ACTR3BP2', 'FAM9B', 'LINC01105', 'KCNK18', 'CLEC4M', 'NMUR2', 'GOLGA2P6', 'ALAS2', 'OR52W1', 'OR52K2', 'ZNF735', 'OR7D4', 'OR10G8', 'SLC5A8', 'OR52N2', 'SFTPB', 'PSG4', 'AKR1C8P', 'SLC10A1', 'C3ORF30', 'CALHM3', 'PASD1', 'OR5H14', 'AWAT1', 'HIST1H3B', 'RNF151', 'OR5K1', 'OR6B2', 'ADCYAP1R1', 'OR52K1', 'CACNG3', 'SHH', 'CCER1', 'OTC', 'OR51B5', 'OR8G2', 'C4ORF50', 'HGC6.3', 'SDC4P', 'OR8H2', 'OR3A2', 'SHD', 'PDX1', 'ERC2-IT1', 'HAO1', 'KRTAP21-2', 'OR4C16', 'CLCA3P', 'VPREB1', 'LINC00052', 'SERPINA7', 'PRLH', 'TSNAX-DISC1', 'SKINTL', 'DSCR10', 'TSPAN16', 'LINC00597', 'CHRNA9', 'HTR1B', 'TMEM8C', 'PRAC1', 'HAVCR1', 'SLC38A8', 'LEUTX', 'F11', 'OR4X2', 'HNRNPCL1', 'FMO9P', 'C7ORF57', 'GPR61', 'NEUROG3', 'AHSG', 'PSG11', 'KRTAP7-1', 'GPHA2', 'DACH2', 'HSD52', 'BRINP3', 'ACSM2B', 'B4GALNT2', 'CALR3', 'SPATA45', 'PPAN-P2RY11', 'SLC4A9', 'POU4F2', 'UGT2B28', 'KRT32', 'SLC25A3P1', 'CCDC63', 'HS3ST4', 'NXNL1', 'SLC9C1', 'GOLGA6L1', 'CPNE6', 'RNF222', 'CELP', 'SSX2', 'ACTBL2', 'VGLL2', 'HPSE2', 'CD1B', 'CLRN1-AS1', 'KRTAP10-7', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.6108924558042391e-15 NRMSE: 4.0969822625301745e-16 MAPE: 7.325056251974543e-12 Pearson Correlation: 0.26090369586339146 Spearman Correlation: 0.22421975336350833 Coefficient of Determination: -0.7194633028843229 RMSE: 0.6925486363290646 NRMSE: 0.18549581795341225 MAPE: 398.45706788198385 Predictor: ElasticNet Pearson Correlation: 0.8551476650673357 Spearman Correlation: 0.7678237705295442 Coefficient of Determination: 0.6872443037237383 RMSE: 0.23700435476057777 NRMSE: 0.06027730989103939 MAPE: 565.6953145181438 Pearson Correlation: 0.5023578070691405 Spearman Correlation: 0.43417748350976954 Coefficient of Determination: 0.2410807162044597 RMSE: 0.4600993469280658 NRMSE: 0.12323539491845878 MAPE: 160.35501654464144 Predictor: RandomForests Pearson Correlation: 0.6502683900131322 Spearman Correlation: 0.5678507669606474 Coefficient of Determination: 0.36179509163699897 RMSE: 0.33855854666245333 NRMSE: 0.08610558423725256 MAPE: 641.8254671785085 Pearson Correlation: 0.5684016542543556 Spearman Correlation: 0.49431096014754444 Coefficient of Determination: 0.2678960549681868 RMSE: 0.451897767996809 NRMSE: 0.12103864148836453 MAPE: 178.85023289793455 Protein: CTNNB1 x_train_column_count: 1007 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'BTNL3', 'F9', 'FAM183CP', 'LINC00111', 'KCNU1', 'LOC727924', 'CXORF51A', 'OR2M3', 'OR10T2', 'OR1S1', 'SOX1', 'SNORD15A', 'HBG1', 'OR10V1', 'FGF23', 'MS4A6E', 'WFDC5', 'GPR151', 'PRM3', 'SCGB1C1', 'CLEC6A', 'PRSS3P2', 'ASAP1-IT1', 'PPY', 'DNAJB8', 'CT47A11', 'TMEM252', 'OR10A5', 'MAGEB10', 'OR8S1', 'PSG7', 'SUN3', 'SPRR1B', 'PRAMEF8', 'CELA2B', 'PLA2G2F', 'CRYAA', 'KLHL40', 'OR2AG1', 'MC2R', 'USP26', 'HIST1H4F', 'DMBT1P1', 'OR8G5', 'OR10K1', 'NPPC', 'PSAPL1', 'SNORD89', 'SLC5A7', 'C1ORF87', 'ALOX12B', 'TUSC7', 'HBBP1', 'LOC391003', 'C15ORF43', 'SFTA3', 'CAPZA3', 'XAGE5', 'LOC391343', 'LINC00636', 'TBC1D28', 'KRT39', 'C20ORF173', 'C22ORF42', 'BMP10', 'SNORA34', 'IFITM5', 'SNORA70B', 'OR4S1', 'PIWIL3', 'C4ORF51', 'TAS2R60', 'CCKBR', 'OR5B2', 'CASC8', 'IQCF2', 'ARR3', 'KRTAP19-1', 'PROKR1', 'FMR1NB', 'NXF2B', 'ARHGAP36', 'P2RX3', 'TTTY15', 'OPN1MW', 'PPBPP1', 'CHODL-AS1', 'PF4', 'KHDC1L', 'LYZL6', 'TEX33', 'OR1B1', 'HBD', 'FAM153C', 'TKTL2', 'ANKRD18DP', 'MYBPHL', 'AKAP14', 'EDDM3A', 'SYT10', 'ACOT12', 'GAGE1', 'C11ORF94', 'CSH2', 'SERPINB4', 'BRDTP1', 'LGI3', 'PRB1', 'SNORA54', 'PRAP1', 'SNORA51', 'OR10S1', 'SFTPC', 'OTP', 'IGF2BP2-AS1', 'SPACA7', 'KCNQ1DN', 'DMRT1', 'YWHAEP7', 'CYP3A4', 'PRSS1', 'ZAR1L', 'C17ORF64', 'GAGE2D', 'FBP2', 'IFNA13', 'KRTAP19-3', 'SLC13A1', 'LHX9', 'CYP2W1', 'LINC00469', 'LOC646813', 'FOXE1', 'C9ORF135', 'OR4K2', 'OTOL1', 'HPD', 'OLIG1', 'PLET1', 'LCNL1', 'CRLF2', 'NEU2', 'GABRG3', 'FCAMR', 'CCDC166', 'SVOP', 'FERD3L', 'FDCSP', 'HAND1', 'NPHS2', 'GH1', 'FAM71C', 'C3ORF49', 'USP17L6P', 'XKR7', 'LINC01101', 'FAM27L', 'VRTN', 'SATB2-AS1', 'SCARNA20', 'CNTNAP5', 'ZFAT-AS1', 'ACSM2A', 'OLAH', 'PTF1A', 'C17ORF78', 'PRDM14', 'HOXC12', 'DNAJC5G', 'LCE1D', 'FMO6P', 'PISRT1', 'TMEM207', 'LINC00696', 'GDNF', 'OR13H1', 'CRNN', 'OR51I2', 'AVPR1B', 'CLDN22', 'SPANXN1', 'ZNF479', 'OR5H6', 'LPO', 'FGA', 'OR6M1', 'PRKAG3', 'OR4D6', 'OR7E24', 'CELA2A', 'IL26', 'HFE2', 'UCMA', 'SCGB1A1', 'OR1L1', 'PWRN2', 'SCN1A', 'MYBPC2', 'FTMT', 'BARHL2', 'OPRD1', 'GYS2', 'IVL', 'OR1K1', 'DEFB110', 'ADAM18', 'EPS8L3', 'CCKAR', 'LOC285627', 'HBZ', 'SLC1A6', 'KRTAP21-1', 'CER1', 'SBSN', 'GABRA6', 'LOC729609', 'PRG1', 'SERPINI2', 'CPLX3', 'FAM27B', 'LMNTD1', 'TFF2', 'CT45A1', 'OR4C12', 'OR4D2', 'SCARNA11', 'POM121L2', 'OR56B1', 'NKX2-1', 'CLCA4', 'HBG2', 'LINC00488', 'SNORA59B', 'OR8D4', 'CYP7A1', 'FOXN3-AS2', 'GBX2', 'GAGE2B', 'LINC00608', 'CGB8', 'OR2M4', 'OR52A4P', 'DRGX', 'HTR3E', 'SNORA38B', 'ANP32D', 'LYZL1', 'CCL24', 'HTR5A', 'SLITRK3', 'YIPF7', 'TSPY1', 'SLC25A31', 'RAX', 'ALLC', 'SYCN', 'SNORA44', 'TARM1', 'HMHB1', 'SLC35G3', 'TMEM88B', 'OR6C74', 'ALX4', 'SPACA3', 'LINC00923', 'A1CF', 'OR6F1', 'CD200R1L', 'SLC51B', 'TSPY2', 'FRMPD2B', 'OR9A2', 'KRT13', 'SNORD94', 'TSKS', 'OR8J3', 'NPBWR2', 'ARL5C', 'OR2T29', 'DYDC1', 'GDPD2', 'ARID3C', 'LINC00602', 'NKX2-6', 'LINC00934', 'OR11H4', 'GOLGA8EP', 'OR13C3', 'PLG', 'TRHR', 'LINC00895', 'MAP3K15', 'MAGEA9B', 'ITLN2', 'POU6F2', 'SRY', 'RAX2', 'OR1N1', 'LINC00575', 'SSX5', 'SNORA37', 'TPTE2', 'CNTN5', 'TCERG1L', 'DPPA2', 'NTS', 'ADGRG4', 'ZIM3', 'BMP15', 'ZCCHC13', 'POTED', 'MUSK', 'SNORA71A', 'KIR3DL3', 'LINC00304', 'KCNK4', 'GRIN2B', 'APOC3', 'IQCF3', 'C2ORF83', 'MYH1', 'C18ORF42', 'TRPM1', 'GPR22', 'IL36RN', 'ALPPL2', 'GAGE2C', 'GAGE12F', 'KCNMB2', 'SNORD116-19', 'TPD52L3', 'OR2L8', 'C20ORF166-AS1', 'NLRP8', 'SNORA74A', 'SNORA76C', 'OR2A14', 'OR4F15', 'CFHR4', 'OR2AT4', 'OR11H6', 'SPANXN3', 'CPLX4', 'SOX3', 'FAM170B', 'DAOA', 'CYP2C18', 'LINC01312', 'CSN3', 'EDDM3B', 'GUCA2B', 'ITIH1', 'USH1C', 'F13B', 'ZNF705A', 'FFAR1', 'GPR52', 'SYCP1', 'ARSF', 'EPPIN', 'DNMT3L', 'PRAMEF14', 'MUC2', 'MTVR2', 'LRRC30', 'SPATA31C1', 'MAGEA1', 'ADAM29', 'TRIM48', 'OR52N5', 'CXADRP2', 'BPIFB3', 'DUSP21', 'OR2T10', 'FAM205A', 'SLC32A1', 'DMP1', 'FOXD4L3', 'PPIAL4E', 'MMP23A', 'PSKH2', 'BTN1A1', 'OR5C1', 'C6ORF10', 'ACER1', 'NKAIN3', 'AATK-AS1', 'SPINK1', 'IFNA14', 'MORC1', 'TRIM75P', 'LOC647859', 'TTTY2', 'TMIGD1', 'SPOCK3', 'CHRNB3', 'BET1P1', 'GCSAML-AS1', 'CSNK1A1P1', 'OR2A2', 'SCARNA8', 'FAM19A4', 'ADGRG7', 'KRTAP4-3', 'OR9G4', 'TMEM72', 'CRYGC', 'PAGE5', 'ODAM', 'OR1S2', 'KRTAP1-5', 'REC114', 'KRTAP1-1', 'TREML4', 'IQCF6', 'TMEM14E', 'KRTAP12-2', 'PPY2P', 'ZFY', 'TSPAN19', 'IQCJ', 'KRT83', 'RFX6', 'PLA2G12B', 'DMRTC1', 'SNORD115-26', 'OR6C4', 'COL6A4P1', 'DCT', 'VWC2L', 'SH2D7', 'HCRTR1', 'NUTM1', 'OR52A5', 'KRT3', 'TPTE', 'REG4', 'AADACL3', 'OR2G6', 'CT47A1', 'CLEC4G', 'OR6S1', 'SNORA16B', 'CGB5', 'BTF3P11', 'SPATA3', 'MAGEA5', 'LINC01020', 'SPDYC', 'KLRC4', 'S100G', 'KRTAP11-1', 'RAPGEF4-AS1', 'LOC400736', 'NF1P2', 'NXPE1', 'KRT85', 'FRMPD4', 'TSGA13', 'RPE65', 'TRPV5', 'LOC100129935', 'ANKRD34C', 'EPB42', 'CA6', 'OR2F1', 'APCS', 'CHIAP2', 'FOXG1', 'KCNJ16', 'ASB15', 'IHH', 'AKR1D1', 'OACYLP', 'GNAS-AS1', 'KRT74', 'KRTAP3-2', 'LOC400940', 'SDR16C6P', 'B3GNT6', 'IFNL1', 'PCGEM1', 'MAGEA12', 'POTEH', 'COX7B2', 'TCP10L2', 'CPA2', 'LINC00303', 'C2ORF27B', 'MAGEB3', 'PCP4', 'DEFB126', 'GFI1B', 'CTRB1', 'C1ORF146', 'UGT1A4', 'CNGA2', 'SLC22A10', 'DISC2', 'SPANXA2', 'INSM2', 'MTNR1B', 'LY6G6D', 'C15ORF32', 'TSPEAR-AS2', 'PRR32', 'TMPRSS11F', 'PRSS48', 'FAM24A', 'GABRR3', 'OR2A12', 'GML', 'TMEM132D', 'LINC00113', 'RNASE8', 'HIST2H2AB', 'ZSCAN10', 'LINC01591', 'NKX6-2', 'ABRA', 'GLTPD2', 'SNORA72', 'OR6B1', 'WFDC8', 'FBXW12', 'LINC00691', 'MOS', 'LOC284661', 'TRIM55', 'LINC01142', 'OR4A16', 'RBM46', 'TLX3', 'HYPM', 'TAAR9', 'OR4D10', 'CNTNAP4', 'CABS1', 'PRAMEF16', 'VWA5B1', 'CRYGB', 'SNORA2B', 'LINC00452', 'GCG', 'SNORA27', 'CFC1B', 'SCGB3A2', 'PRAMEF5', 'FAM170A', 'OR51T1', 'CGB2', 'GSC2', 'HIST1H3A', 'CCK', 'LRRTM1', 'AGXT2', 'ADRB3', 'AIRE', 'GSTA5', 'OR4D5', 'OR10AD1', 'DUXA', 'MCF2', 'KRTAP12-1', 'MS4A10', 'RPL3L', 'LOC643923', 'AADAC', 'DEFB123', 'OR5B17', 'SERPINB3', 'ANKRD20A20P', 'SNCB', 'MYF5', 'HMSD', 'MT1B', 'CST9L', 'EPGN', 'ZG16', 'SNORD15B', 'TRIM15', 'RHAG', 'GABRB1', 'CLRN1', 'TBC1D3P2', 'ART1', 'OR4D1', 'PRLHR', 'KRTAP10-11', 'GRK1', 'HYMAI', 'MYADML', 'BANF2', 'USP50', 'B3GALT1', 'NPSR1-AS1', 'HRK', 'INS-IGF2', 'NHLH2', 'PABPC1L2A', 'SLC5A2', 'FAM47C', 'TRIM49', 'OR5T2', 'CEACAM22P', 'AQP2', 'MMD2', 'APOA5', 'PACRG-AS1', 'UTS2R', 'PRSS57', 'LINC00523', 'SPINK14', 'MYH7', 'WFDC6', 'INS', 'IGFBP1', 'FAM19A1', 'IFNB1', 'TAS2R42', 'INSC', 'MUC13', 'KRTAP12-3', 'SLCO1B7', 'GHSR', 'CYP1A2', 'C1ORF140', 'SPINT3', 'TNFSF18', 'KLK9', 'STATH', 'KCNB2', 'FLJ25758', 'LINC00202-2', 'MAS1L', 'IFNL2', 'FOXR1', 'SNORA16A', 'IL31', 'MAGEA11', 'TNP2', 'LOC392196', 'SNORA68', 'SLITRK1', 'LOC285629', 'FAM138D', 'FAM138B', 'AMER3', 'F2', 'NPSR1', 'MRGPRX1', 'TAS2R13', 'CTRB2', 'LOC100130417', 'VCX3A', 'ACTR3BP2', 'FAM9B', 'LINC01105', 'KCNK18', 'CLEC4M', 'NMUR2', 'GOLGA2P6', 'ALAS2', 'OR52W1', 'OR52K2', 'ZNF735', 'OR7D4', 'OR10G8', 'SLC5A8', 'OR52N2', 'SFTPB', 'PSG4', 'AKR1C8P', 'SLC10A1', 'C3ORF30', 'CALHM3', 'PASD1', 'OR5H14', 'AWAT1', 'HIST1H3B', 'RNF151', 'OR5K1', 'OR6B2', 'ADCYAP1R1', 'OR52K1', 'CACNG3', 'SHH', 'CCER1', 'OTC', 'OR51B5', 'OR8G2', 'C4ORF50', 'HGC6.3', 'SDC4P', 'OR8H2', 'OR3A2', 'SHD', 'PDX1', 'ERC2-IT1', 'HAO1', 'KRTAP21-2', 'OR4C16', 'CLCA3P', 'VPREB1', 'LINC00052', 'SERPINA7', 'PRLH', 'TSNAX-DISC1', 'SKINTL', 'DSCR10', 'TSPAN16', 'LINC00597', 'CHRNA9', 'HTR1B', 'TMEM8C', 'PRAC1', 'HAVCR1', 'SLC38A8', 'LEUTX', 'F11', 'OR4X2', 'HNRNPCL1', 'FMO9P', 'C7ORF57', 'GPR61', 'NEUROG3', 'AHSG', 'PSG11', 'KRTAP7-1', 'GPHA2', 'DACH2', 'HSD52', 'BRINP3', 'ACSM2B', 'B4GALNT2', 'CALR3', 'SPATA45', 'PPAN-P2RY11', 'SLC4A9', 'POU4F2', 'UGT2B28', 'KRT32', 'SLC25A3P1', 'CCDC63', 'HS3ST4', 'NXNL1', 'SLC9C1', 'GOLGA6L1', 'CPNE6', 'RNF222', 'CELP', 'SSX2', 'ACTBL2', 'VGLL2', 'HPSE2', 'CD1B', 'CLRN1-AS1', 'KRTAP10-7', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 3.204711481928924e-15 NRMSE: 6.303523764612361e-16 MAPE: 4.596331633889109e-12 Pearson Correlation: 0.12065613974229439 Spearman Correlation: 0.09587401339168818 Coefficient of Determination: -3.066664551395209 RMSE: 1.3665627316145021 NRMSE: 0.4376656124361473 MAPE: 518.0517401387906 Predictor: ElasticNet Pearson Correlation: 0.8846253085595108 Spearman Correlation: 0.8874494707097498 Coefficient of Determination: 0.7370515597771052 RMSE: 0.38765559979796127 NRMSE: 0.0762501179775691 MAPE: 199.8289549336806 Pearson Correlation: 0.32290305686205567 Spearman Correlation: 0.3165450940784798 Coefficient of Determination: -0.01739178568140165 RMSE: 0.6835251691473025 NRMSE: 0.218910888501213 MAPE: 241.68912179955325 Predictor: RandomForests Pearson Correlation: 0.5835862140697211 Spearman Correlation: 0.564692566625456 Coefficient of Determination: 0.20408078255743978 RMSE: 0.6744430097599473 NRMSE: 0.13265991537371113 MAPE: 578.8796090056196 Pearson Correlation: 0.365179665000061 Spearman Correlation: 0.40040648885896335 Coefficient of Determination: 0.1185755429660369 RMSE: 0.6362135962534538 NRMSE: 0.2037585299252988 MAPE: 248.00798041319018 Protein: CCNE1 x_train_column_count: 1007 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'BTNL3', 'F9', 'FAM183CP', 'LINC00111', 'KCNU1', 'LOC727924', 'CXORF51A', 'OR2M3', 'OR10T2', 'OR1S1', 'SOX1', 'SNORD15A', 'HBG1', 'OR10V1', 'FGF23', 'MS4A6E', 'WFDC5', 'GPR151', 'PRM3', 'SCGB1C1', 'CLEC6A', 'PRSS3P2', 'ASAP1-IT1', 'PPY', 'DNAJB8', 'CT47A11', 'TMEM252', 'OR10A5', 'MAGEB10', 'OR8S1', 'PSG7', 'SUN3', 'SPRR1B', 'PRAMEF8', 'CELA2B', 'PLA2G2F', 'CRYAA', 'KLHL40', 'OR2AG1', 'MC2R', 'USP26', 'HIST1H4F', 'DMBT1P1', 'OR8G5', 'OR10K1', 'NPPC', 'PSAPL1', 'SNORD89', 'SLC5A7', 'C1ORF87', 'ALOX12B', 'TUSC7', 'HBBP1', 'LOC391003', 'C15ORF43', 'SFTA3', 'CAPZA3', 'XAGE5', 'LOC391343', 'LINC00636', 'TBC1D28', 'KRT39', 'C20ORF173', 'C22ORF42', 'BMP10', 'SNORA34', 'IFITM5', 'SNORA70B', 'OR4S1', 'PIWIL3', 'C4ORF51', 'TAS2R60', 'CCKBR', 'OR5B2', 'CASC8', 'IQCF2', 'ARR3', 'KRTAP19-1', 'PROKR1', 'FMR1NB', 'NXF2B', 'ARHGAP36', 'P2RX3', 'TTTY15', 'OPN1MW', 'PPBPP1', 'CHODL-AS1', 'PF4', 'KHDC1L', 'LYZL6', 'TEX33', 'OR1B1', 'HBD', 'FAM153C', 'TKTL2', 'ANKRD18DP', 'MYBPHL', 'AKAP14', 'EDDM3A', 'SYT10', 'ACOT12', 'GAGE1', 'C11ORF94', 'CSH2', 'SERPINB4', 'BRDTP1', 'LGI3', 'PRB1', 'SNORA54', 'PRAP1', 'SNORA51', 'OR10S1', 'SFTPC', 'OTP', 'IGF2BP2-AS1', 'SPACA7', 'KCNQ1DN', 'DMRT1', 'YWHAEP7', 'CYP3A4', 'PRSS1', 'ZAR1L', 'C17ORF64', 'GAGE2D', 'FBP2', 'IFNA13', 'KRTAP19-3', 'SLC13A1', 'LHX9', 'CYP2W1', 'LINC00469', 'LOC646813', 'FOXE1', 'C9ORF135', 'OR4K2', 'OTOL1', 'HPD', 'OLIG1', 'PLET1', 'LCNL1', 'CRLF2', 'NEU2', 'GABRG3', 'FCAMR', 'CCDC166', 'SVOP', 'FERD3L', 'FDCSP', 'HAND1', 'NPHS2', 'GH1', 'FAM71C', 'C3ORF49', 'USP17L6P', 'XKR7', 'LINC01101', 'FAM27L', 'VRTN', 'SATB2-AS1', 'SCARNA20', 'CNTNAP5', 'ZFAT-AS1', 'ACSM2A', 'OLAH', 'PTF1A', 'C17ORF78', 'PRDM14', 'HOXC12', 'DNAJC5G', 'LCE1D', 'FMO6P', 'PISRT1', 'TMEM207', 'LINC00696', 'GDNF', 'OR13H1', 'CRNN', 'OR51I2', 'AVPR1B', 'CLDN22', 'SPANXN1', 'ZNF479', 'OR5H6', 'LPO', 'FGA', 'OR6M1', 'PRKAG3', 'OR4D6', 'OR7E24', 'CELA2A', 'IL26', 'HFE2', 'UCMA', 'SCGB1A1', 'OR1L1', 'PWRN2', 'SCN1A', 'MYBPC2', 'FTMT', 'BARHL2', 'OPRD1', 'GYS2', 'IVL', 'OR1K1', 'DEFB110', 'ADAM18', 'EPS8L3', 'CCKAR', 'LOC285627', 'HBZ', 'SLC1A6', 'KRTAP21-1', 'CER1', 'SBSN', 'GABRA6', 'LOC729609', 'PRG1', 'SERPINI2', 'CPLX3', 'FAM27B', 'LMNTD1', 'TFF2', 'CT45A1', 'OR4C12', 'OR4D2', 'SCARNA11', 'POM121L2', 'OR56B1', 'NKX2-1', 'CLCA4', 'HBG2', 'LINC00488', 'SNORA59B', 'OR8D4', 'CYP7A1', 'FOXN3-AS2', 'GBX2', 'GAGE2B', 'LINC00608', 'CGB8', 'OR2M4', 'OR52A4P', 'DRGX', 'HTR3E', 'SNORA38B', 'ANP32D', 'LYZL1', 'CCL24', 'HTR5A', 'SLITRK3', 'YIPF7', 'TSPY1', 'SLC25A31', 'RAX', 'ALLC', 'SYCN', 'SNORA44', 'TARM1', 'HMHB1', 'SLC35G3', 'TMEM88B', 'OR6C74', 'ALX4', 'SPACA3', 'LINC00923', 'A1CF', 'OR6F1', 'CD200R1L', 'SLC51B', 'TSPY2', 'FRMPD2B', 'OR9A2', 'KRT13', 'SNORD94', 'TSKS', 'OR8J3', 'NPBWR2', 'ARL5C', 'OR2T29', 'DYDC1', 'GDPD2', 'ARID3C', 'LINC00602', 'NKX2-6', 'LINC00934', 'OR11H4', 'GOLGA8EP', 'OR13C3', 'PLG', 'TRHR', 'LINC00895', 'MAP3K15', 'MAGEA9B', 'ITLN2', 'POU6F2', 'SRY', 'RAX2', 'OR1N1', 'LINC00575', 'SSX5', 'SNORA37', 'TPTE2', 'CNTN5', 'TCERG1L', 'DPPA2', 'NTS', 'ADGRG4', 'ZIM3', 'BMP15', 'ZCCHC13', 'POTED', 'MUSK', 'SNORA71A', 'KIR3DL3', 'LINC00304', 'KCNK4', 'GRIN2B', 'APOC3', 'IQCF3', 'C2ORF83', 'MYH1', 'C18ORF42', 'TRPM1', 'GPR22', 'IL36RN', 'ALPPL2', 'GAGE2C', 'GAGE12F', 'KCNMB2', 'SNORD116-19', 'TPD52L3', 'OR2L8', 'C20ORF166-AS1', 'NLRP8', 'SNORA74A', 'SNORA76C', 'OR2A14', 'OR4F15', 'CFHR4', 'OR2AT4', 'OR11H6', 'SPANXN3', 'CPLX4', 'SOX3', 'FAM170B', 'DAOA', 'CYP2C18', 'LINC01312', 'CSN3', 'EDDM3B', 'GUCA2B', 'ITIH1', 'USH1C', 'F13B', 'ZNF705A', 'FFAR1', 'GPR52', 'SYCP1', 'ARSF', 'EPPIN', 'DNMT3L', 'PRAMEF14', 'MUC2', 'MTVR2', 'LRRC30', 'SPATA31C1', 'MAGEA1', 'ADAM29', 'TRIM48', 'OR52N5', 'CXADRP2', 'BPIFB3', 'DUSP21', 'OR2T10', 'FAM205A', 'SLC32A1', 'DMP1', 'FOXD4L3', 'PPIAL4E', 'MMP23A', 'PSKH2', 'BTN1A1', 'OR5C1', 'C6ORF10', 'ACER1', 'NKAIN3', 'AATK-AS1', 'SPINK1', 'IFNA14', 'MORC1', 'TRIM75P', 'LOC647859', 'TTTY2', 'TMIGD1', 'SPOCK3', 'CHRNB3', 'BET1P1', 'GCSAML-AS1', 'CSNK1A1P1', 'OR2A2', 'SCARNA8', 'FAM19A4', 'ADGRG7', 'KRTAP4-3', 'OR9G4', 'TMEM72', 'CRYGC', 'PAGE5', 'ODAM', 'OR1S2', 'KRTAP1-5', 'REC114', 'KRTAP1-1', 'TREML4', 'IQCF6', 'TMEM14E', 'KRTAP12-2', 'PPY2P', 'ZFY', 'TSPAN19', 'IQCJ', 'KRT83', 'RFX6', 'PLA2G12B', 'DMRTC1', 'SNORD115-26', 'OR6C4', 'COL6A4P1', 'DCT', 'VWC2L', 'SH2D7', 'HCRTR1', 'NUTM1', 'OR52A5', 'KRT3', 'TPTE', 'REG4', 'AADACL3', 'OR2G6', 'CT47A1', 'CLEC4G', 'OR6S1', 'SNORA16B', 'CGB5', 'BTF3P11', 'SPATA3', 'MAGEA5', 'LINC01020', 'SPDYC', 'KLRC4', 'S100G', 'KRTAP11-1', 'RAPGEF4-AS1', 'LOC400736', 'NF1P2', 'NXPE1', 'KRT85', 'FRMPD4', 'TSGA13', 'RPE65', 'TRPV5', 'LOC100129935', 'ANKRD34C', 'EPB42', 'CA6', 'OR2F1', 'APCS', 'CHIAP2', 'FOXG1', 'KCNJ16', 'ASB15', 'IHH', 'AKR1D1', 'OACYLP', 'GNAS-AS1', 'KRT74', 'KRTAP3-2', 'LOC400940', 'SDR16C6P', 'B3GNT6', 'IFNL1', 'PCGEM1', 'MAGEA12', 'POTEH', 'COX7B2', 'TCP10L2', 'CPA2', 'LINC00303', 'C2ORF27B', 'MAGEB3', 'PCP4', 'DEFB126', 'GFI1B', 'CTRB1', 'C1ORF146', 'UGT1A4', 'CNGA2', 'SLC22A10', 'DISC2', 'SPANXA2', 'INSM2', 'MTNR1B', 'LY6G6D', 'C15ORF32', 'TSPEAR-AS2', 'PRR32', 'TMPRSS11F', 'PRSS48', 'FAM24A', 'GABRR3', 'OR2A12', 'GML', 'TMEM132D', 'LINC00113', 'RNASE8', 'HIST2H2AB', 'ZSCAN10', 'LINC01591', 'NKX6-2', 'ABRA', 'GLTPD2', 'SNORA72', 'OR6B1', 'WFDC8', 'FBXW12', 'LINC00691', 'MOS', 'LOC284661', 'TRIM55', 'LINC01142', 'OR4A16', 'RBM46', 'TLX3', 'HYPM', 'TAAR9', 'OR4D10', 'CNTNAP4', 'CABS1', 'PRAMEF16', 'VWA5B1', 'CRYGB', 'SNORA2B', 'LINC00452', 'GCG', 'SNORA27', 'CFC1B', 'SCGB3A2', 'PRAMEF5', 'FAM170A', 'OR51T1', 'CGB2', 'GSC2', 'HIST1H3A', 'CCK', 'LRRTM1', 'AGXT2', 'ADRB3', 'AIRE', 'GSTA5', 'OR4D5', 'OR10AD1', 'DUXA', 'MCF2', 'KRTAP12-1', 'MS4A10', 'RPL3L', 'LOC643923', 'AADAC', 'DEFB123', 'OR5B17', 'SERPINB3', 'ANKRD20A20P', 'SNCB', 'MYF5', 'HMSD', 'MT1B', 'CST9L', 'EPGN', 'ZG16', 'SNORD15B', 'TRIM15', 'RHAG', 'GABRB1', 'CLRN1', 'TBC1D3P2', 'ART1', 'OR4D1', 'PRLHR', 'KRTAP10-11', 'GRK1', 'HYMAI', 'MYADML', 'BANF2', 'USP50', 'B3GALT1', 'NPSR1-AS1', 'HRK', 'INS-IGF2', 'NHLH2', 'PABPC1L2A', 'SLC5A2', 'FAM47C', 'TRIM49', 'OR5T2', 'CEACAM22P', 'AQP2', 'MMD2', 'APOA5', 'PACRG-AS1', 'UTS2R', 'PRSS57', 'LINC00523', 'SPINK14', 'MYH7', 'WFDC6', 'INS', 'IGFBP1', 'FAM19A1', 'IFNB1', 'TAS2R42', 'INSC', 'MUC13', 'KRTAP12-3', 'SLCO1B7', 'GHSR', 'CYP1A2', 'C1ORF140', 'SPINT3', 'TNFSF18', 'KLK9', 'STATH', 'KCNB2', 'FLJ25758', 'LINC00202-2', 'MAS1L', 'IFNL2', 'FOXR1', 'SNORA16A', 'IL31', 'MAGEA11', 'TNP2', 'LOC392196', 'SNORA68', 'SLITRK1', 'LOC285629', 'FAM138D', 'FAM138B', 'AMER3', 'F2', 'NPSR1', 'MRGPRX1', 'TAS2R13', 'CTRB2', 'LOC100130417', 'VCX3A', 'ACTR3BP2', 'FAM9B', 'LINC01105', 'KCNK18', 'CLEC4M', 'NMUR2', 'GOLGA2P6', 'ALAS2', 'OR52W1', 'OR52K2', 'ZNF735', 'OR7D4', 'OR10G8', 'SLC5A8', 'OR52N2', 'SFTPB', 'PSG4', 'AKR1C8P', 'SLC10A1', 'C3ORF30', 'CALHM3', 'PASD1', 'OR5H14', 'AWAT1', 'HIST1H3B', 'RNF151', 'OR5K1', 'OR6B2', 'ADCYAP1R1', 'OR52K1', 'CACNG3', 'SHH', 'CCER1', 'OTC', 'OR51B5', 'OR8G2', 'C4ORF50', 'HGC6.3', 'SDC4P', 'OR8H2', 'OR3A2', 'SHD', 'PDX1', 'ERC2-IT1', 'HAO1', 'KRTAP21-2', 'OR4C16', 'CLCA3P', 'VPREB1', 'LINC00052', 'SERPINA7', 'PRLH', 'TSNAX-DISC1', 'SKINTL', 'DSCR10', 'TSPAN16', 'LINC00597', 'CHRNA9', 'HTR1B', 'TMEM8C', 'PRAC1', 'HAVCR1', 'SLC38A8', 'LEUTX', 'F11', 'OR4X2', 'HNRNPCL1', 'FMO9P', 'C7ORF57', 'GPR61', 'NEUROG3', 'AHSG', 'PSG11', 'KRTAP7-1', 'GPHA2', 'DACH2', 'HSD52', 'BRINP3', 'ACSM2B', 'B4GALNT2', 'CALR3', 'SPATA45', 'PPAN-P2RY11', 'SLC4A9', 'POU4F2', 'UGT2B28', 'KRT32', 'SLC25A3P1', 'CCDC63', 'HS3ST4', 'NXNL1', 'SLC9C1', 'GOLGA6L1', 'CPNE6', 'RNF222', 'CELP', 'SSX2', 'ACTBL2', 'VGLL2', 'HPSE2', 'CD1B', 'CLRN1-AS1', 'KRTAP10-7', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 1.3655033160130538e-15 NRMSE: 4.863769602896006e-16 MAPE: 2.8551213956413297e-13 Pearson Correlation: 0.4832878553657085 Spearman Correlation: 0.3442461876083243 Coefficient of Determination: 0.09679500807169727 RMSE: 0.6159317251925995 NRMSE: 0.14864293389786895 MAPE: 142.0419419295358 Predictor: ElasticNet Pearson Correlation: 0.9211175563315543 Spearman Correlation: 0.8192281870867887 Coefficient of Determination: 0.8261496715265861 RMSE: 0.18712590767706055 NRMSE: 0.06665214877188265 MAPE: 49.688769669079505 Pearson Correlation: 0.7851670380337815 Spearman Correlation: 0.6144041696280502 Coefficient of Determination: 0.6147261859372117 RMSE: 0.40227603017563734 NRMSE: 0.09708135969680173 MAPE: 102.6940018629924 Predictor: RandomForests Pearson Correlation: 0.8649690386892175 Spearman Correlation: 0.7126842234631837 Coefficient of Determination: 0.7450625272114062 RMSE: 0.22660161476194893 NRMSE: 0.08071295272019552 MAPE: 55.49789580329559 Pearson Correlation: 0.7807787048814068 Spearman Correlation: 0.7310931981731176 Coefficient of Determination: 0.5797742969338211 RMSE: 0.420127118836763 NRMSE: 0.10138936671012935 MAPE: 76.26731673089164 Protein: CCND1 x_train_column_count: 1007 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'BTNL3', 'F9', 'FAM183CP', 'LINC00111', 'KCNU1', 'LOC727924', 'CXORF51A', 'OR2M3', 'OR10T2', 'OR1S1', 'SOX1', 'SNORD15A', 'HBG1', 'OR10V1', 'FGF23', 'MS4A6E', 'WFDC5', 'GPR151', 'PRM3', 'SCGB1C1', 'CLEC6A', 'PRSS3P2', 'ASAP1-IT1', 'PPY', 'DNAJB8', 'CT47A11', 'TMEM252', 'OR10A5', 'MAGEB10', 'OR8S1', 'PSG7', 'SUN3', 'SPRR1B', 'PRAMEF8', 'CELA2B', 'PLA2G2F', 'CRYAA', 'KLHL40', 'OR2AG1', 'MC2R', 'USP26', 'HIST1H4F', 'DMBT1P1', 'OR8G5', 'OR10K1', 'NPPC', 'PSAPL1', 'SNORD89', 'SLC5A7', 'C1ORF87', 'ALOX12B', 'TUSC7', 'HBBP1', 'LOC391003', 'C15ORF43', 'SFTA3', 'CAPZA3', 'XAGE5', 'LOC391343', 'LINC00636', 'TBC1D28', 'KRT39', 'C20ORF173', 'C22ORF42', 'BMP10', 'SNORA34', 'IFITM5', 'SNORA70B', 'OR4S1', 'PIWIL3', 'C4ORF51', 'TAS2R60', 'CCKBR', 'OR5B2', 'CASC8', 'IQCF2', 'ARR3', 'KRTAP19-1', 'PROKR1', 'FMR1NB', 'NXF2B', 'ARHGAP36', 'P2RX3', 'TTTY15', 'OPN1MW', 'PPBPP1', 'CHODL-AS1', 'PF4', 'KHDC1L', 'LYZL6', 'TEX33', 'OR1B1', 'HBD', 'FAM153C', 'TKTL2', 'ANKRD18DP', 'MYBPHL', 'AKAP14', 'EDDM3A', 'SYT10', 'ACOT12', 'GAGE1', 'C11ORF94', 'CSH2', 'SERPINB4', 'BRDTP1', 'LGI3', 'PRB1', 'SNORA54', 'PRAP1', 'SNORA51', 'OR10S1', 'SFTPC', 'OTP', 'IGF2BP2-AS1', 'SPACA7', 'KCNQ1DN', 'DMRT1', 'YWHAEP7', 'CYP3A4', 'PRSS1', 'ZAR1L', 'C17ORF64', 'GAGE2D', 'FBP2', 'IFNA13', 'KRTAP19-3', 'SLC13A1', 'LHX9', 'CYP2W1', 'LINC00469', 'LOC646813', 'FOXE1', 'C9ORF135', 'OR4K2', 'OTOL1', 'HPD', 'OLIG1', 'PLET1', 'LCNL1', 'CRLF2', 'NEU2', 'GABRG3', 'FCAMR', 'CCDC166', 'SVOP', 'FERD3L', 'FDCSP', 'HAND1', 'NPHS2', 'GH1', 'FAM71C', 'C3ORF49', 'USP17L6P', 'XKR7', 'LINC01101', 'FAM27L', 'VRTN', 'SATB2-AS1', 'SCARNA20', 'CNTNAP5', 'ZFAT-AS1', 'ACSM2A', 'OLAH', 'PTF1A', 'C17ORF78', 'PRDM14', 'HOXC12', 'DNAJC5G', 'LCE1D', 'FMO6P', 'PISRT1', 'TMEM207', 'LINC00696', 'GDNF', 'OR13H1', 'CRNN', 'OR51I2', 'AVPR1B', 'CLDN22', 'SPANXN1', 'ZNF479', 'OR5H6', 'LPO', 'FGA', 'OR6M1', 'PRKAG3', 'OR4D6', 'OR7E24', 'CELA2A', 'IL26', 'HFE2', 'UCMA', 'SCGB1A1', 'OR1L1', 'PWRN2', 'SCN1A', 'MYBPC2', 'FTMT', 'BARHL2', 'OPRD1', 'GYS2', 'IVL', 'OR1K1', 'DEFB110', 'ADAM18', 'EPS8L3', 'CCKAR', 'LOC285627', 'HBZ', 'SLC1A6', 'KRTAP21-1', 'CER1', 'SBSN', 'GABRA6', 'LOC729609', 'PRG1', 'SERPINI2', 'CPLX3', 'FAM27B', 'LMNTD1', 'TFF2', 'CT45A1', 'OR4C12', 'OR4D2', 'SCARNA11', 'POM121L2', 'OR56B1', 'NKX2-1', 'CLCA4', 'HBG2', 'LINC00488', 'SNORA59B', 'OR8D4', 'CYP7A1', 'FOXN3-AS2', 'GBX2', 'GAGE2B', 'LINC00608', 'CGB8', 'OR2M4', 'OR52A4P', 'DRGX', 'HTR3E', 'SNORA38B', 'ANP32D', 'LYZL1', 'CCL24', 'HTR5A', 'SLITRK3', 'YIPF7', 'TSPY1', 'SLC25A31', 'RAX', 'ALLC', 'SYCN', 'SNORA44', 'TARM1', 'HMHB1', 'SLC35G3', 'TMEM88B', 'OR6C74', 'ALX4', 'SPACA3', 'LINC00923', 'A1CF', 'OR6F1', 'CD200R1L', 'SLC51B', 'TSPY2', 'FRMPD2B', 'OR9A2', 'KRT13', 'SNORD94', 'TSKS', 'OR8J3', 'NPBWR2', 'ARL5C', 'OR2T29', 'DYDC1', 'GDPD2', 'ARID3C', 'LINC00602', 'NKX2-6', 'LINC00934', 'OR11H4', 'GOLGA8EP', 'OR13C3', 'PLG', 'TRHR', 'LINC00895', 'MAP3K15', 'MAGEA9B', 'ITLN2', 'POU6F2', 'SRY', 'RAX2', 'OR1N1', 'LINC00575', 'SSX5', 'SNORA37', 'TPTE2', 'CNTN5', 'TCERG1L', 'DPPA2', 'NTS', 'ADGRG4', 'ZIM3', 'BMP15', 'ZCCHC13', 'POTED', 'MUSK', 'SNORA71A', 'KIR3DL3', 'LINC00304', 'KCNK4', 'GRIN2B', 'APOC3', 'IQCF3', 'C2ORF83', 'MYH1', 'C18ORF42', 'TRPM1', 'GPR22', 'IL36RN', 'ALPPL2', 'GAGE2C', 'GAGE12F', 'KCNMB2', 'SNORD116-19', 'TPD52L3', 'OR2L8', 'C20ORF166-AS1', 'NLRP8', 'SNORA74A', 'SNORA76C', 'OR2A14', 'OR4F15', 'CFHR4', 'OR2AT4', 'OR11H6', 'SPANXN3', 'CPLX4', 'SOX3', 'FAM170B', 'DAOA', 'CYP2C18', 'LINC01312', 'CSN3', 'EDDM3B', 'GUCA2B', 'ITIH1', 'USH1C', 'F13B', 'ZNF705A', 'FFAR1', 'GPR52', 'SYCP1', 'ARSF', 'EPPIN', 'DNMT3L', 'PRAMEF14', 'MUC2', 'MTVR2', 'LRRC30', 'SPATA31C1', 'MAGEA1', 'ADAM29', 'TRIM48', 'OR52N5', 'CXADRP2', 'BPIFB3', 'DUSP21', 'OR2T10', 'FAM205A', 'SLC32A1', 'DMP1', 'FOXD4L3', 'PPIAL4E', 'MMP23A', 'PSKH2', 'BTN1A1', 'OR5C1', 'C6ORF10', 'ACER1', 'NKAIN3', 'AATK-AS1', 'SPINK1', 'IFNA14', 'MORC1', 'TRIM75P', 'LOC647859', 'TTTY2', 'TMIGD1', 'SPOCK3', 'CHRNB3', 'BET1P1', 'GCSAML-AS1', 'CSNK1A1P1', 'OR2A2', 'SCARNA8', 'FAM19A4', 'ADGRG7', 'KRTAP4-3', 'OR9G4', 'TMEM72', 'CRYGC', 'PAGE5', 'ODAM', 'OR1S2', 'KRTAP1-5', 'REC114', 'KRTAP1-1', 'TREML4', 'IQCF6', 'TMEM14E', 'KRTAP12-2', 'PPY2P', 'ZFY', 'TSPAN19', 'IQCJ', 'KRT83', 'RFX6', 'PLA2G12B', 'DMRTC1', 'SNORD115-26', 'OR6C4', 'COL6A4P1', 'DCT', 'VWC2L', 'SH2D7', 'HCRTR1', 'NUTM1', 'OR52A5', 'KRT3', 'TPTE', 'REG4', 'AADACL3', 'OR2G6', 'CT47A1', 'CLEC4G', 'OR6S1', 'SNORA16B', 'CGB5', 'BTF3P11', 'SPATA3', 'MAGEA5', 'LINC01020', 'SPDYC', 'KLRC4', 'S100G', 'KRTAP11-1', 'RAPGEF4-AS1', 'LOC400736', 'NF1P2', 'NXPE1', 'KRT85', 'FRMPD4', 'TSGA13', 'RPE65', 'TRPV5', 'LOC100129935', 'ANKRD34C', 'EPB42', 'CA6', 'OR2F1', 'APCS', 'CHIAP2', 'FOXG1', 'KCNJ16', 'ASB15', 'IHH', 'AKR1D1', 'OACYLP', 'GNAS-AS1', 'KRT74', 'KRTAP3-2', 'LOC400940', 'SDR16C6P', 'B3GNT6', 'IFNL1', 'PCGEM1', 'MAGEA12', 'POTEH', 'COX7B2', 'TCP10L2', 'CPA2', 'LINC00303', 'C2ORF27B', 'MAGEB3', 'PCP4', 'DEFB126', 'GFI1B', 'CTRB1', 'C1ORF146', 'UGT1A4', 'CNGA2', 'SLC22A10', 'DISC2', 'SPANXA2', 'INSM2', 'MTNR1B', 'LY6G6D', 'C15ORF32', 'TSPEAR-AS2', 'PRR32', 'TMPRSS11F', 'PRSS48', 'FAM24A', 'GABRR3', 'OR2A12', 'GML', 'TMEM132D', 'LINC00113', 'RNASE8', 'HIST2H2AB', 'ZSCAN10', 'LINC01591', 'NKX6-2', 'ABRA', 'GLTPD2', 'SNORA72', 'OR6B1', 'WFDC8', 'FBXW12', 'LINC00691', 'MOS', 'LOC284661', 'TRIM55', 'LINC01142', 'OR4A16', 'RBM46', 'TLX3', 'HYPM', 'TAAR9', 'OR4D10', 'CNTNAP4', 'CABS1', 'PRAMEF16', 'VWA5B1', 'CRYGB', 'SNORA2B', 'LINC00452', 'GCG', 'SNORA27', 'CFC1B', 'SCGB3A2', 'PRAMEF5', 'FAM170A', 'OR51T1', 'CGB2', 'GSC2', 'HIST1H3A', 'CCK', 'LRRTM1', 'AGXT2', 'ADRB3', 'AIRE', 'GSTA5', 'OR4D5', 'OR10AD1', 'DUXA', 'MCF2', 'KRTAP12-1', 'MS4A10', 'RPL3L', 'LOC643923', 'AADAC', 'DEFB123', 'OR5B17', 'SERPINB3', 'ANKRD20A20P', 'SNCB', 'MYF5', 'HMSD', 'MT1B', 'CST9L', 'EPGN', 'ZG16', 'SNORD15B', 'TRIM15', 'RHAG', 'GABRB1', 'CLRN1', 'TBC1D3P2', 'ART1', 'OR4D1', 'PRLHR', 'KRTAP10-11', 'GRK1', 'HYMAI', 'MYADML', 'BANF2', 'USP50', 'B3GALT1', 'NPSR1-AS1', 'HRK', 'INS-IGF2', 'NHLH2', 'PABPC1L2A', 'SLC5A2', 'FAM47C', 'TRIM49', 'OR5T2', 'CEACAM22P', 'AQP2', 'MMD2', 'APOA5', 'PACRG-AS1', 'UTS2R', 'PRSS57', 'LINC00523', 'SPINK14', 'MYH7', 'WFDC6', 'INS', 'IGFBP1', 'FAM19A1', 'IFNB1', 'TAS2R42', 'INSC', 'MUC13', 'KRTAP12-3', 'SLCO1B7', 'GHSR', 'CYP1A2', 'C1ORF140', 'SPINT3', 'TNFSF18', 'KLK9', 'STATH', 'KCNB2', 'FLJ25758', 'LINC00202-2', 'MAS1L', 'IFNL2', 'FOXR1', 'SNORA16A', 'IL31', 'MAGEA11', 'TNP2', 'LOC392196', 'SNORA68', 'SLITRK1', 'LOC285629', 'FAM138D', 'FAM138B', 'AMER3', 'F2', 'NPSR1', 'MRGPRX1', 'TAS2R13', 'CTRB2', 'LOC100130417', 'VCX3A', 'ACTR3BP2', 'FAM9B', 'LINC01105', 'KCNK18', 'CLEC4M', 'NMUR2', 'GOLGA2P6', 'ALAS2', 'OR52W1', 'OR52K2', 'ZNF735', 'OR7D4', 'OR10G8', 'SLC5A8', 'OR52N2', 'SFTPB', 'PSG4', 'AKR1C8P', 'SLC10A1', 'C3ORF30', 'CALHM3', 'PASD1', 'OR5H14', 'AWAT1', 'HIST1H3B', 'RNF151', 'OR5K1', 'OR6B2', 'ADCYAP1R1', 'OR52K1', 'CACNG3', 'SHH', 'CCER1', 'OTC', 'OR51B5', 'OR8G2', 'C4ORF50', 'HGC6.3', 'SDC4P', 'OR8H2', 'OR3A2', 'SHD', 'PDX1', 'ERC2-IT1', 'HAO1', 'KRTAP21-2', 'OR4C16', 'CLCA3P', 'VPREB1', 'LINC00052', 'SERPINA7', 'PRLH', 'TSNAX-DISC1', 'SKINTL', 'DSCR10', 'TSPAN16', 'LINC00597', 'CHRNA9', 'HTR1B', 'TMEM8C', 'PRAC1', 'HAVCR1', 'SLC38A8', 'LEUTX', 'F11', 'OR4X2', 'HNRNPCL1', 'FMO9P', 'C7ORF57', 'GPR61', 'NEUROG3', 'AHSG', 'PSG11', 'KRTAP7-1', 'GPHA2', 'DACH2', 'HSD52', 'BRINP3', 'ACSM2B', 'B4GALNT2', 'CALR3', 'SPATA45', 'PPAN-P2RY11', 'SLC4A9', 'POU4F2', 'UGT2B28', 'KRT32', 'SLC25A3P1', 'CCDC63', 'HS3ST4', 'NXNL1', 'SLC9C1', 'GOLGA6L1', 'CPNE6', 'RNF222', 'CELP', 'SSX2', 'ACTBL2', 'VGLL2', 'HPSE2', 'CD1B', 'CLRN1-AS1', 'KRTAP10-7', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.0083669143330546e-15 NRMSE: 6.351197434829781e-16 MAPE: 5.0483706553642204e-12 Pearson Correlation: 0.04186337259508963 Spearman Correlation: 0.01636180002244417 Coefficient of Determination: -1.6365454885742645 RMSE: 0.44808675744808335 NRMSE: 0.2862771734632086 MAPE: 468.7104647818197 Predictor: ElasticNet Pearson Correlation: 0.7256165211545387 Spearman Correlation: 0.7118837158415032 Coefficient of Determination: 0.4611882250017626 RMSE: 0.16708082413580838 NRMSE: 0.10523583098345282 MAPE: 547.597485836214 Pearson Correlation: 0.3159262408610512 Spearman Correlation: 0.23076347585381368 Coefficient of Determination: 0.09414534451389067 RMSE: 0.2626477805010454 NRMSE: 0.16780246898266404 MAPE: 255.22860464552446 Predictor: RandomForests Pearson Correlation: 0.5593863819207872 Spearman Correlation: 0.5765187907173528 Coefficient of Determination: 0.2782063079901248 RMSE: 0.19338136031645037 NRMSE: 0.12180121958861381 MAPE: 518.1419723451872 Pearson Correlation: 0.3345588434798972 Spearman Correlation: 0.31585181860122946 Coefficient of Determination: 0.10916236009845537 RMSE: 0.2604616300428353 NRMSE: 0.16640576407331575 MAPE: 250.39107489094343 Protein: ERBB2 x_train_column_count: 1007 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'BTNL3', 'F9', 'FAM183CP', 'LINC00111', 'KCNU1', 'LOC727924', 'CXORF51A', 'OR2M3', 'OR10T2', 'OR1S1', 'SOX1', 'SNORD15A', 'HBG1', 'OR10V1', 'FGF23', 'MS4A6E', 'WFDC5', 'GPR151', 'PRM3', 'SCGB1C1', 'CLEC6A', 'PRSS3P2', 'ASAP1-IT1', 'PPY', 'DNAJB8', 'CT47A11', 'TMEM252', 'OR10A5', 'MAGEB10', 'OR8S1', 'PSG7', 'SUN3', 'SPRR1B', 'PRAMEF8', 'CELA2B', 'PLA2G2F', 'CRYAA', 'KLHL40', 'OR2AG1', 'MC2R', 'USP26', 'HIST1H4F', 'DMBT1P1', 'OR8G5', 'OR10K1', 'NPPC', 'PSAPL1', 'SNORD89', 'SLC5A7', 'C1ORF87', 'ALOX12B', 'TUSC7', 'HBBP1', 'LOC391003', 'C15ORF43', 'SFTA3', 'CAPZA3', 'XAGE5', 'LOC391343', 'LINC00636', 'TBC1D28', 'KRT39', 'C20ORF173', 'C22ORF42', 'BMP10', 'SNORA34', 'IFITM5', 'SNORA70B', 'OR4S1', 'PIWIL3', 'C4ORF51', 'TAS2R60', 'CCKBR', 'OR5B2', 'CASC8', 'IQCF2', 'ARR3', 'KRTAP19-1', 'PROKR1', 'FMR1NB', 'NXF2B', 'ARHGAP36', 'P2RX3', 'TTTY15', 'OPN1MW', 'PPBPP1', 'CHODL-AS1', 'PF4', 'KHDC1L', 'LYZL6', 'TEX33', 'OR1B1', 'HBD', 'FAM153C', 'TKTL2', 'ANKRD18DP', 'MYBPHL', 'AKAP14', 'EDDM3A', 'SYT10', 'ACOT12', 'GAGE1', 'C11ORF94', 'CSH2', 'SERPINB4', 'BRDTP1', 'LGI3', 'PRB1', 'SNORA54', 'PRAP1', 'SNORA51', 'OR10S1', 'SFTPC', 'OTP', 'IGF2BP2-AS1', 'SPACA7', 'KCNQ1DN', 'DMRT1', 'YWHAEP7', 'CYP3A4', 'PRSS1', 'ZAR1L', 'C17ORF64', 'GAGE2D', 'FBP2', 'IFNA13', 'KRTAP19-3', 'SLC13A1', 'LHX9', 'CYP2W1', 'LINC00469', 'LOC646813', 'FOXE1', 'C9ORF135', 'OR4K2', 'OTOL1', 'HPD', 'OLIG1', 'PLET1', 'LCNL1', 'CRLF2', 'NEU2', 'GABRG3', 'FCAMR', 'CCDC166', 'SVOP', 'FERD3L', 'FDCSP', 'HAND1', 'NPHS2', 'GH1', 'FAM71C', 'C3ORF49', 'USP17L6P', 'XKR7', 'LINC01101', 'FAM27L', 'VRTN', 'SATB2-AS1', 'SCARNA20', 'CNTNAP5', 'ZFAT-AS1', 'ACSM2A', 'OLAH', 'PTF1A', 'C17ORF78', 'PRDM14', 'HOXC12', 'DNAJC5G', 'LCE1D', 'FMO6P', 'PISRT1', 'TMEM207', 'LINC00696', 'GDNF', 'OR13H1', 'CRNN', 'OR51I2', 'AVPR1B', 'CLDN22', 'SPANXN1', 'ZNF479', 'OR5H6', 'LPO', 'FGA', 'OR6M1', 'PRKAG3', 'OR4D6', 'OR7E24', 'CELA2A', 'IL26', 'HFE2', 'UCMA', 'SCGB1A1', 'OR1L1', 'PWRN2', 'SCN1A', 'MYBPC2', 'FTMT', 'BARHL2', 'OPRD1', 'GYS2', 'IVL', 'OR1K1', 'DEFB110', 'ADAM18', 'EPS8L3', 'CCKAR', 'LOC285627', 'HBZ', 'SLC1A6', 'KRTAP21-1', 'CER1', 'SBSN', 'GABRA6', 'LOC729609', 'PRG1', 'SERPINI2', 'CPLX3', 'FAM27B', 'LMNTD1', 'TFF2', 'CT45A1', 'OR4C12', 'OR4D2', 'SCARNA11', 'POM121L2', 'OR56B1', 'NKX2-1', 'CLCA4', 'HBG2', 'LINC00488', 'SNORA59B', 'OR8D4', 'CYP7A1', 'FOXN3-AS2', 'GBX2', 'GAGE2B', 'LINC00608', 'CGB8', 'OR2M4', 'OR52A4P', 'DRGX', 'HTR3E', 'SNORA38B', 'ANP32D', 'LYZL1', 'CCL24', 'HTR5A', 'SLITRK3', 'YIPF7', 'TSPY1', 'SLC25A31', 'RAX', 'ALLC', 'SYCN', 'SNORA44', 'TARM1', 'HMHB1', 'SLC35G3', 'TMEM88B', 'OR6C74', 'ALX4', 'SPACA3', 'LINC00923', 'A1CF', 'OR6F1', 'CD200R1L', 'SLC51B', 'TSPY2', 'FRMPD2B', 'OR9A2', 'KRT13', 'SNORD94', 'TSKS', 'OR8J3', 'NPBWR2', 'ARL5C', 'OR2T29', 'DYDC1', 'GDPD2', 'ARID3C', 'LINC00602', 'NKX2-6', 'LINC00934', 'OR11H4', 'GOLGA8EP', 'OR13C3', 'PLG', 'TRHR', 'LINC00895', 'MAP3K15', 'MAGEA9B', 'ITLN2', 'POU6F2', 'SRY', 'RAX2', 'OR1N1', 'LINC00575', 'SSX5', 'SNORA37', 'TPTE2', 'CNTN5', 'TCERG1L', 'DPPA2', 'NTS', 'ADGRG4', 'ZIM3', 'BMP15', 'ZCCHC13', 'POTED', 'MUSK', 'SNORA71A', 'KIR3DL3', 'LINC00304', 'KCNK4', 'GRIN2B', 'APOC3', 'IQCF3', 'C2ORF83', 'MYH1', 'C18ORF42', 'TRPM1', 'GPR22', 'IL36RN', 'ALPPL2', 'GAGE2C', 'GAGE12F', 'KCNMB2', 'SNORD116-19', 'TPD52L3', 'OR2L8', 'C20ORF166-AS1', 'NLRP8', 'SNORA74A', 'SNORA76C', 'OR2A14', 'OR4F15', 'CFHR4', 'OR2AT4', 'OR11H6', 'SPANXN3', 'CPLX4', 'SOX3', 'FAM170B', 'DAOA', 'CYP2C18', 'LINC01312', 'CSN3', 'EDDM3B', 'GUCA2B', 'ITIH1', 'USH1C', 'F13B', 'ZNF705A', 'FFAR1', 'GPR52', 'SYCP1', 'ARSF', 'EPPIN', 'DNMT3L', 'PRAMEF14', 'MUC2', 'MTVR2', 'LRRC30', 'SPATA31C1', 'MAGEA1', 'ADAM29', 'TRIM48', 'OR52N5', 'CXADRP2', 'BPIFB3', 'DUSP21', 'OR2T10', 'FAM205A', 'SLC32A1', 'DMP1', 'FOXD4L3', 'PPIAL4E', 'MMP23A', 'PSKH2', 'BTN1A1', 'OR5C1', 'C6ORF10', 'ACER1', 'NKAIN3', 'AATK-AS1', 'SPINK1', 'IFNA14', 'MORC1', 'TRIM75P', 'LOC647859', 'TTTY2', 'TMIGD1', 'SPOCK3', 'CHRNB3', 'BET1P1', 'GCSAML-AS1', 'CSNK1A1P1', 'OR2A2', 'SCARNA8', 'FAM19A4', 'ADGRG7', 'KRTAP4-3', 'OR9G4', 'TMEM72', 'CRYGC', 'PAGE5', 'ODAM', 'OR1S2', 'KRTAP1-5', 'REC114', 'KRTAP1-1', 'TREML4', 'IQCF6', 'TMEM14E', 'KRTAP12-2', 'PPY2P', 'ZFY', 'TSPAN19', 'IQCJ', 'KRT83', 'RFX6', 'PLA2G12B', 'DMRTC1', 'SNORD115-26', 'OR6C4', 'COL6A4P1', 'DCT', 'VWC2L', 'SH2D7', 'HCRTR1', 'NUTM1', 'OR52A5', 'KRT3', 'TPTE', 'REG4', 'AADACL3', 'OR2G6', 'CT47A1', 'CLEC4G', 'OR6S1', 'SNORA16B', 'CGB5', 'BTF3P11', 'SPATA3', 'MAGEA5', 'LINC01020', 'SPDYC', 'KLRC4', 'S100G', 'KRTAP11-1', 'RAPGEF4-AS1', 'LOC400736', 'NF1P2', 'NXPE1', 'KRT85', 'FRMPD4', 'TSGA13', 'RPE65', 'TRPV5', 'LOC100129935', 'ANKRD34C', 'EPB42', 'CA6', 'OR2F1', 'APCS', 'CHIAP2', 'FOXG1', 'KCNJ16', 'ASB15', 'IHH', 'AKR1D1', 'OACYLP', 'GNAS-AS1', 'KRT74', 'KRTAP3-2', 'LOC400940', 'SDR16C6P', 'B3GNT6', 'IFNL1', 'PCGEM1', 'MAGEA12', 'POTEH', 'COX7B2', 'TCP10L2', 'CPA2', 'LINC00303', 'C2ORF27B', 'MAGEB3', 'PCP4', 'DEFB126', 'GFI1B', 'CTRB1', 'C1ORF146', 'UGT1A4', 'CNGA2', 'SLC22A10', 'DISC2', 'SPANXA2', 'INSM2', 'MTNR1B', 'LY6G6D', 'C15ORF32', 'TSPEAR-AS2', 'PRR32', 'TMPRSS11F', 'PRSS48', 'FAM24A', 'GABRR3', 'OR2A12', 'GML', 'TMEM132D', 'LINC00113', 'RNASE8', 'HIST2H2AB', 'ZSCAN10', 'LINC01591', 'NKX6-2', 'ABRA', 'GLTPD2', 'SNORA72', 'OR6B1', 'WFDC8', 'FBXW12', 'LINC00691', 'MOS', 'LOC284661', 'TRIM55', 'LINC01142', 'OR4A16', 'RBM46', 'TLX3', 'HYPM', 'TAAR9', 'OR4D10', 'CNTNAP4', 'CABS1', 'PRAMEF16', 'VWA5B1', 'CRYGB', 'SNORA2B', 'LINC00452', 'GCG', 'SNORA27', 'CFC1B', 'SCGB3A2', 'PRAMEF5', 'FAM170A', 'OR51T1', 'CGB2', 'GSC2', 'HIST1H3A', 'CCK', 'LRRTM1', 'AGXT2', 'ADRB3', 'AIRE', 'GSTA5', 'OR4D5', 'OR10AD1', 'DUXA', 'MCF2', 'KRTAP12-1', 'MS4A10', 'RPL3L', 'LOC643923', 'AADAC', 'DEFB123', 'OR5B17', 'SERPINB3', 'ANKRD20A20P', 'SNCB', 'MYF5', 'HMSD', 'MT1B', 'CST9L', 'EPGN', 'ZG16', 'SNORD15B', 'TRIM15', 'RHAG', 'GABRB1', 'CLRN1', 'TBC1D3P2', 'ART1', 'OR4D1', 'PRLHR', 'KRTAP10-11', 'GRK1', 'HYMAI', 'MYADML', 'BANF2', 'USP50', 'B3GALT1', 'NPSR1-AS1', 'HRK', 'INS-IGF2', 'NHLH2', 'PABPC1L2A', 'SLC5A2', 'FAM47C', 'TRIM49', 'OR5T2', 'CEACAM22P', 'AQP2', 'MMD2', 'APOA5', 'PACRG-AS1', 'UTS2R', 'PRSS57', 'LINC00523', 'SPINK14', 'MYH7', 'WFDC6', 'INS', 'IGFBP1', 'FAM19A1', 'IFNB1', 'TAS2R42', 'INSC', 'MUC13', 'KRTAP12-3', 'SLCO1B7', 'GHSR', 'CYP1A2', 'C1ORF140', 'SPINT3', 'TNFSF18', 'KLK9', 'STATH', 'KCNB2', 'FLJ25758', 'LINC00202-2', 'MAS1L', 'IFNL2', 'FOXR1', 'SNORA16A', 'IL31', 'MAGEA11', 'TNP2', 'LOC392196', 'SNORA68', 'SLITRK1', 'LOC285629', 'FAM138D', 'FAM138B', 'AMER3', 'F2', 'NPSR1', 'MRGPRX1', 'TAS2R13', 'CTRB2', 'LOC100130417', 'VCX3A', 'ACTR3BP2', 'FAM9B', 'LINC01105', 'KCNK18', 'CLEC4M', 'NMUR2', 'GOLGA2P6', 'ALAS2', 'OR52W1', 'OR52K2', 'ZNF735', 'OR7D4', 'OR10G8', 'SLC5A8', 'OR52N2', 'SFTPB', 'PSG4', 'AKR1C8P', 'SLC10A1', 'C3ORF30', 'CALHM3', 'PASD1', 'OR5H14', 'AWAT1', 'HIST1H3B', 'RNF151', 'OR5K1', 'OR6B2', 'ADCYAP1R1', 'OR52K1', 'CACNG3', 'SHH', 'CCER1', 'OTC', 'OR51B5', 'OR8G2', 'C4ORF50', 'HGC6.3', 'SDC4P', 'OR8H2', 'OR3A2', 'SHD', 'PDX1', 'ERC2-IT1', 'HAO1', 'KRTAP21-2', 'OR4C16', 'CLCA3P', 'VPREB1', 'LINC00052', 'SERPINA7', 'PRLH', 'TSNAX-DISC1', 'SKINTL', 'DSCR10', 'TSPAN16', 'LINC00597', 'CHRNA9', 'HTR1B', 'TMEM8C', 'PRAC1', 'HAVCR1', 'SLC38A8', 'LEUTX', 'F11', 'OR4X2', 'HNRNPCL1', 'FMO9P', 'C7ORF57', 'GPR61', 'NEUROG3', 'AHSG', 'PSG11', 'KRTAP7-1', 'GPHA2', 'DACH2', 'HSD52', 'BRINP3', 'ACSM2B', 'B4GALNT2', 'CALR3', 'SPATA45', 'PPAN-P2RY11', 'SLC4A9', 'POU4F2', 'UGT2B28', 'KRT32', 'SLC25A3P1', 'CCDC63', 'HS3ST4', 'NXNL1', 'SLC9C1', 'GOLGA6L1', 'CPNE6', 'RNF222', 'CELP', 'SSX2', 'ACTBL2', 'VGLL2', 'HPSE2', 'CD1B', 'CLRN1-AS1', 'KRTAP10-7', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 4.374557731630074e-15 NRMSE: 7.452779071554039e-16 MAPE: 6.208105660817563e-12 Pearson Correlation: 0.3539381098316277 Spearman Correlation: 0.22689310340527935 Coefficient of Determination: -1.1313756336668135 RMSE: 1.2668049329562996 NRMSE: 0.280297584457639 MAPE: 1190.5582378413533 Predictor: ElasticNet Pearson Correlation: 0.9554108678910753 Spearman Correlation: 0.9001111531180445 Coefficient of Determination: 0.9009028052818115 RMSE: 0.3235863083769014 NRMSE: 0.0551282532969149 MAPE: 447.5047283188379 Pearson Correlation: 0.7002982130283221 Spearman Correlation: 0.5062781331438049 Coefficient of Determination: 0.4839953680788208 RMSE: 0.6233135208116861 NRMSE: 0.13791647766604406 MAPE: 341.6760166143317 Predictor: RandomForests Pearson Correlation: 0.848720999968676 Spearman Correlation: 0.6648494206300208 Coefficient of Determination: 0.7167273083905881 RMSE: 0.5470938234736153 NRMSE: 0.0932064370365803 MAPE: 541.736733822906 Pearson Correlation: 0.7894077019880669 Spearman Correlation: 0.6103010990649615 Coefficient of Determination: 0.609259401018276 RMSE: 0.5424054149639947 NRMSE: 0.12001447393826635 MAPE: 283.6289882006635 Protein: ERBB3 x_train_column_count: 1007 x_train columns: ['KRTAP4-8', 'CXORF66', 'OOSP2', 'PPP1R3A', 'LIPM', 'IFNA4', 'C1ORF68', 'KRTAP4-12', 'IL1F10', 'GABRA4', 'OR2W1', 'BCORP1', 'C12ORF77', 'DUX4L6', 'LINC01553', 'OR5A1', 'CT45A6', 'DEFB124', 'OR4K1', 'ADAD1', 'RAG2', 'LCE5A', 'OR8K3', 'MS4A5', 'CTSL3P', 'SNORA36B', 'PRSS54', 'SNAR-G1', 'LCE2D', 'BTBD17', 'OR9K2', 'DEFB127', 'FGF22', 'MRGPRG-AS1', 'SMCP', 'OR52A1', 'MROH5', 'FAM150A', 'REXO1L6P', 'SNORA36A', 'HNF1B', 'FAM92A1P2', 'LHX3', 'CHAT', 'OR7G3', 'CTXN3', 'HES3', 'CT47A2', 'SLC18A3', 'TBC1D21', 'OR8I2', 'AMBN', 'SNAR-I', 'SNAR-E', 'DEFB113', 'FAM41AY1', 'C11ORF40', 'SNORA58', 'OR51A2', 'FLG2', 'BSX', 'TMPRSS11B', 'GJA10', 'NR0B1', 'CSN2', 'DEFB119', 'SMR3B', 'GJA8', 'HHLA1', 'SNORD8', 'TAAR8', 'GUCA1C', 'BARHL1', 'SNAR-A13', 'LINC01548', 'LCE1F', 'ATP4B', 'SPRR2G', 'GSX2', 'C17ORF102', 'TTTY21', 'LELP1', 'LRTM1', 'LCE2A', 'SNORA5B', 'CT47B1', 'GYPA', 'TYR', 'SLC28A2', 'KRTAP4-11', 'C3ORF79', 'GLYATL3', 'LINC00305', 'CCDC38', 'CPN1', 'FGF6', 'CLC', 'CEACAM20', 'PROL1', 'ESX1', 'FXYD4', 'OR8U1', 'ASB18', 'FAM224B', 'PSMB11', 'IL37', 'ZNF536', 'SPANXN4', 'TMEM247', 'CA5A', 'GNAT3', 'ZNRF4', 'OR2B3', 'ZNF804B', 'OR2T12', 'LINC00326', 'ANXA8L1', 'OR13C9', 'OR7C2', 'FNDC7', 'OR7G1', 'OR6C76', 'GLRA4', 'ST8SIA3', 'OR7G2', 'OR5K3', 'C12ORF40', 'CT47A7', 'CT47A6', 'PAQR9', 'KRTAP6-2', 'OR4M2', 'LINC00671', 'H1FOO', 'OR8H1', 'OR2AE1', 'PGM5-AS1', 'CD300LD', 'MAGEA10', 'HAO2', 'APOA2', 'SPIC', 'TSPYL6', 'OR2M2', 'OR8A1', 'SNORA55', 'AHSP', 'DPRX', 'KRT78', 'DEFB128', 'SCP2D1', 'OLIG2', 'OR6T1', 'SNORD115-7', 'EIF1AY', 'FGF4', 'SLC6A19', 'OR4S2', 'LOC440040', 'TEX36-AS1', 'PLCZ1', 'CST13P', 'LINC00314', 'ZPBP', 'CDKL4', 'KRTAP1-3', 'HYALP1', 'LYPD8', 'PSG8', 'HTR3B', 'IFNA21', 'OR2C3', 'CD5L', 'PSG1', 'OR4B1', 'KRTDAP', 'OR10G4', 'GNAT1', 'OC90', 'OR4A47', 'RSPH6A', 'TMEM196', 'CCL15-CCL14', 'SEC14L3', 'IL13', 'GOT1L1', 'PLSCR5', 'CFHR2', 'OR6C2', 'SPRR4', 'HBM', 'SOST', 'FAM25BP', 'OR52H1', 'DDI1', 'SSX6', 'SCARNA22', 'ASB11', 'SCARNA4', 'TEX13B', 'KRTAP19-5', 'SNORA24', 'KRT2', 'OR8B8', 'ASB10', 'C1ORF105', 'GPR50', 'LILRP2', 'SNORA28', 'TAGLN3', 'SNORA22', 'GJD2', 'VSTM2B', 'LRRC7', 'ARG1', 'TFAMP1', 'SLCO1A2', 'FAM71A', 'GABRA1', 'SPAM1', 'NMS', 'OR1M1', 'CABP5', 'NCOR1P1', 'CIB4', 'OR4D11', 'TMEM179', 'OR2L2', 'OLIG3', 'URAD', 'H1FNT', 'IGFL4', 'LGALS14', 'HIST1H4G', 'SPATA31A3', 'GLYCAM1', 'SNORA20', 'IFNA16', 'OR11L1', 'DAZL', 'CLCA1', 'OR2T34', 'SCARNA14', 'DEFB109P1', 'OR5AN1', 'RAB9BP1', 'TXLNGY', 'BTNL3', 'F9', 'FAM183CP', 'LINC00111', 'KCNU1', 'LOC727924', 'CXORF51A', 'OR2M3', 'OR10T2', 'OR1S1', 'SOX1', 'SNORD15A', 'HBG1', 'OR10V1', 'FGF23', 'MS4A6E', 'WFDC5', 'GPR151', 'PRM3', 'SCGB1C1', 'CLEC6A', 'PRSS3P2', 'ASAP1-IT1', 'PPY', 'DNAJB8', 'CT47A11', 'TMEM252', 'OR10A5', 'MAGEB10', 'OR8S1', 'PSG7', 'SUN3', 'SPRR1B', 'PRAMEF8', 'CELA2B', 'PLA2G2F', 'CRYAA', 'KLHL40', 'OR2AG1', 'MC2R', 'USP26', 'HIST1H4F', 'DMBT1P1', 'OR8G5', 'OR10K1', 'NPPC', 'PSAPL1', 'SNORD89', 'SLC5A7', 'C1ORF87', 'ALOX12B', 'TUSC7', 'HBBP1', 'LOC391003', 'C15ORF43', 'SFTA3', 'CAPZA3', 'XAGE5', 'LOC391343', 'LINC00636', 'TBC1D28', 'KRT39', 'C20ORF173', 'C22ORF42', 'BMP10', 'SNORA34', 'IFITM5', 'SNORA70B', 'OR4S1', 'PIWIL3', 'C4ORF51', 'TAS2R60', 'CCKBR', 'OR5B2', 'CASC8', 'IQCF2', 'ARR3', 'KRTAP19-1', 'PROKR1', 'FMR1NB', 'NXF2B', 'ARHGAP36', 'P2RX3', 'TTTY15', 'OPN1MW', 'PPBPP1', 'CHODL-AS1', 'PF4', 'KHDC1L', 'LYZL6', 'TEX33', 'OR1B1', 'HBD', 'FAM153C', 'TKTL2', 'ANKRD18DP', 'MYBPHL', 'AKAP14', 'EDDM3A', 'SYT10', 'ACOT12', 'GAGE1', 'C11ORF94', 'CSH2', 'SERPINB4', 'BRDTP1', 'LGI3', 'PRB1', 'SNORA54', 'PRAP1', 'SNORA51', 'OR10S1', 'SFTPC', 'OTP', 'IGF2BP2-AS1', 'SPACA7', 'KCNQ1DN', 'DMRT1', 'YWHAEP7', 'CYP3A4', 'PRSS1', 'ZAR1L', 'C17ORF64', 'GAGE2D', 'FBP2', 'IFNA13', 'KRTAP19-3', 'SLC13A1', 'LHX9', 'CYP2W1', 'LINC00469', 'LOC646813', 'FOXE1', 'C9ORF135', 'OR4K2', 'OTOL1', 'HPD', 'OLIG1', 'PLET1', 'LCNL1', 'CRLF2', 'NEU2', 'GABRG3', 'FCAMR', 'CCDC166', 'SVOP', 'FERD3L', 'FDCSP', 'HAND1', 'NPHS2', 'GH1', 'FAM71C', 'C3ORF49', 'USP17L6P', 'XKR7', 'LINC01101', 'FAM27L', 'VRTN', 'SATB2-AS1', 'SCARNA20', 'CNTNAP5', 'ZFAT-AS1', 'ACSM2A', 'OLAH', 'PTF1A', 'C17ORF78', 'PRDM14', 'HOXC12', 'DNAJC5G', 'LCE1D', 'FMO6P', 'PISRT1', 'TMEM207', 'LINC00696', 'GDNF', 'OR13H1', 'CRNN', 'OR51I2', 'AVPR1B', 'CLDN22', 'SPANXN1', 'ZNF479', 'OR5H6', 'LPO', 'FGA', 'OR6M1', 'PRKAG3', 'OR4D6', 'OR7E24', 'CELA2A', 'IL26', 'HFE2', 'UCMA', 'SCGB1A1', 'OR1L1', 'PWRN2', 'SCN1A', 'MYBPC2', 'FTMT', 'BARHL2', 'OPRD1', 'GYS2', 'IVL', 'OR1K1', 'DEFB110', 'ADAM18', 'EPS8L3', 'CCKAR', 'LOC285627', 'HBZ', 'SLC1A6', 'KRTAP21-1', 'CER1', 'SBSN', 'GABRA6', 'LOC729609', 'PRG1', 'SERPINI2', 'CPLX3', 'FAM27B', 'LMNTD1', 'TFF2', 'CT45A1', 'OR4C12', 'OR4D2', 'SCARNA11', 'POM121L2', 'OR56B1', 'NKX2-1', 'CLCA4', 'HBG2', 'LINC00488', 'SNORA59B', 'OR8D4', 'CYP7A1', 'FOXN3-AS2', 'GBX2', 'GAGE2B', 'LINC00608', 'CGB8', 'OR2M4', 'OR52A4P', 'DRGX', 'HTR3E', 'SNORA38B', 'ANP32D', 'LYZL1', 'CCL24', 'HTR5A', 'SLITRK3', 'YIPF7', 'TSPY1', 'SLC25A31', 'RAX', 'ALLC', 'SYCN', 'SNORA44', 'TARM1', 'HMHB1', 'SLC35G3', 'TMEM88B', 'OR6C74', 'ALX4', 'SPACA3', 'LINC00923', 'A1CF', 'OR6F1', 'CD200R1L', 'SLC51B', 'TSPY2', 'FRMPD2B', 'OR9A2', 'KRT13', 'SNORD94', 'TSKS', 'OR8J3', 'NPBWR2', 'ARL5C', 'OR2T29', 'DYDC1', 'GDPD2', 'ARID3C', 'LINC00602', 'NKX2-6', 'LINC00934', 'OR11H4', 'GOLGA8EP', 'OR13C3', 'PLG', 'TRHR', 'LINC00895', 'MAP3K15', 'MAGEA9B', 'ITLN2', 'POU6F2', 'SRY', 'RAX2', 'OR1N1', 'LINC00575', 'SSX5', 'SNORA37', 'TPTE2', 'CNTN5', 'TCERG1L', 'DPPA2', 'NTS', 'ADGRG4', 'ZIM3', 'BMP15', 'ZCCHC13', 'POTED', 'MUSK', 'SNORA71A', 'KIR3DL3', 'LINC00304', 'KCNK4', 'GRIN2B', 'APOC3', 'IQCF3', 'C2ORF83', 'MYH1', 'C18ORF42', 'TRPM1', 'GPR22', 'IL36RN', 'ALPPL2', 'GAGE2C', 'GAGE12F', 'KCNMB2', 'SNORD116-19', 'TPD52L3', 'OR2L8', 'C20ORF166-AS1', 'NLRP8', 'SNORA74A', 'SNORA76C', 'OR2A14', 'OR4F15', 'CFHR4', 'OR2AT4', 'OR11H6', 'SPANXN3', 'CPLX4', 'SOX3', 'FAM170B', 'DAOA', 'CYP2C18', 'LINC01312', 'CSN3', 'EDDM3B', 'GUCA2B', 'ITIH1', 'USH1C', 'F13B', 'ZNF705A', 'FFAR1', 'GPR52', 'SYCP1', 'ARSF', 'EPPIN', 'DNMT3L', 'PRAMEF14', 'MUC2', 'MTVR2', 'LRRC30', 'SPATA31C1', 'MAGEA1', 'ADAM29', 'TRIM48', 'OR52N5', 'CXADRP2', 'BPIFB3', 'DUSP21', 'OR2T10', 'FAM205A', 'SLC32A1', 'DMP1', 'FOXD4L3', 'PPIAL4E', 'MMP23A', 'PSKH2', 'BTN1A1', 'OR5C1', 'C6ORF10', 'ACER1', 'NKAIN3', 'AATK-AS1', 'SPINK1', 'IFNA14', 'MORC1', 'TRIM75P', 'LOC647859', 'TTTY2', 'TMIGD1', 'SPOCK3', 'CHRNB3', 'BET1P1', 'GCSAML-AS1', 'CSNK1A1P1', 'OR2A2', 'SCARNA8', 'FAM19A4', 'ADGRG7', 'KRTAP4-3', 'OR9G4', 'TMEM72', 'CRYGC', 'PAGE5', 'ODAM', 'OR1S2', 'KRTAP1-5', 'REC114', 'KRTAP1-1', 'TREML4', 'IQCF6', 'TMEM14E', 'KRTAP12-2', 'PPY2P', 'ZFY', 'TSPAN19', 'IQCJ', 'KRT83', 'RFX6', 'PLA2G12B', 'DMRTC1', 'SNORD115-26', 'OR6C4', 'COL6A4P1', 'DCT', 'VWC2L', 'SH2D7', 'HCRTR1', 'NUTM1', 'OR52A5', 'KRT3', 'TPTE', 'REG4', 'AADACL3', 'OR2G6', 'CT47A1', 'CLEC4G', 'OR6S1', 'SNORA16B', 'CGB5', 'BTF3P11', 'SPATA3', 'MAGEA5', 'LINC01020', 'SPDYC', 'KLRC4', 'S100G', 'KRTAP11-1', 'RAPGEF4-AS1', 'LOC400736', 'NF1P2', 'NXPE1', 'KRT85', 'FRMPD4', 'TSGA13', 'RPE65', 'TRPV5', 'LOC100129935', 'ANKRD34C', 'EPB42', 'CA6', 'OR2F1', 'APCS', 'CHIAP2', 'FOXG1', 'KCNJ16', 'ASB15', 'IHH', 'AKR1D1', 'OACYLP', 'GNAS-AS1', 'KRT74', 'KRTAP3-2', 'LOC400940', 'SDR16C6P', 'B3GNT6', 'IFNL1', 'PCGEM1', 'MAGEA12', 'POTEH', 'COX7B2', 'TCP10L2', 'CPA2', 'LINC00303', 'C2ORF27B', 'MAGEB3', 'PCP4', 'DEFB126', 'GFI1B', 'CTRB1', 'C1ORF146', 'UGT1A4', 'CNGA2', 'SLC22A10', 'DISC2', 'SPANXA2', 'INSM2', 'MTNR1B', 'LY6G6D', 'C15ORF32', 'TSPEAR-AS2', 'PRR32', 'TMPRSS11F', 'PRSS48', 'FAM24A', 'GABRR3', 'OR2A12', 'GML', 'TMEM132D', 'LINC00113', 'RNASE8', 'HIST2H2AB', 'ZSCAN10', 'LINC01591', 'NKX6-2', 'ABRA', 'GLTPD2', 'SNORA72', 'OR6B1', 'WFDC8', 'FBXW12', 'LINC00691', 'MOS', 'LOC284661', 'TRIM55', 'LINC01142', 'OR4A16', 'RBM46', 'TLX3', 'HYPM', 'TAAR9', 'OR4D10', 'CNTNAP4', 'CABS1', 'PRAMEF16', 'VWA5B1', 'CRYGB', 'SNORA2B', 'LINC00452', 'GCG', 'SNORA27', 'CFC1B', 'SCGB3A2', 'PRAMEF5', 'FAM170A', 'OR51T1', 'CGB2', 'GSC2', 'HIST1H3A', 'CCK', 'LRRTM1', 'AGXT2', 'ADRB3', 'AIRE', 'GSTA5', 'OR4D5', 'OR10AD1', 'DUXA', 'MCF2', 'KRTAP12-1', 'MS4A10', 'RPL3L', 'LOC643923', 'AADAC', 'DEFB123', 'OR5B17', 'SERPINB3', 'ANKRD20A20P', 'SNCB', 'MYF5', 'HMSD', 'MT1B', 'CST9L', 'EPGN', 'ZG16', 'SNORD15B', 'TRIM15', 'RHAG', 'GABRB1', 'CLRN1', 'TBC1D3P2', 'ART1', 'OR4D1', 'PRLHR', 'KRTAP10-11', 'GRK1', 'HYMAI', 'MYADML', 'BANF2', 'USP50', 'B3GALT1', 'NPSR1-AS1', 'HRK', 'INS-IGF2', 'NHLH2', 'PABPC1L2A', 'SLC5A2', 'FAM47C', 'TRIM49', 'OR5T2', 'CEACAM22P', 'AQP2', 'MMD2', 'APOA5', 'PACRG-AS1', 'UTS2R', 'PRSS57', 'LINC00523', 'SPINK14', 'MYH7', 'WFDC6', 'INS', 'IGFBP1', 'FAM19A1', 'IFNB1', 'TAS2R42', 'INSC', 'MUC13', 'KRTAP12-3', 'SLCO1B7', 'GHSR', 'CYP1A2', 'C1ORF140', 'SPINT3', 'TNFSF18', 'KLK9', 'STATH', 'KCNB2', 'FLJ25758', 'LINC00202-2', 'MAS1L', 'IFNL2', 'FOXR1', 'SNORA16A', 'IL31', 'MAGEA11', 'TNP2', 'LOC392196', 'SNORA68', 'SLITRK1', 'LOC285629', 'FAM138D', 'FAM138B', 'AMER3', 'F2', 'NPSR1', 'MRGPRX1', 'TAS2R13', 'CTRB2', 'LOC100130417', 'VCX3A', 'ACTR3BP2', 'FAM9B', 'LINC01105', 'KCNK18', 'CLEC4M', 'NMUR2', 'GOLGA2P6', 'ALAS2', 'OR52W1', 'OR52K2', 'ZNF735', 'OR7D4', 'OR10G8', 'SLC5A8', 'OR52N2', 'SFTPB', 'PSG4', 'AKR1C8P', 'SLC10A1', 'C3ORF30', 'CALHM3', 'PASD1', 'OR5H14', 'AWAT1', 'HIST1H3B', 'RNF151', 'OR5K1', 'OR6B2', 'ADCYAP1R1', 'OR52K1', 'CACNG3', 'SHH', 'CCER1', 'OTC', 'OR51B5', 'OR8G2', 'C4ORF50', 'HGC6.3', 'SDC4P', 'OR8H2', 'OR3A2', 'SHD', 'PDX1', 'ERC2-IT1', 'HAO1', 'KRTAP21-2', 'OR4C16', 'CLCA3P', 'VPREB1', 'LINC00052', 'SERPINA7', 'PRLH', 'TSNAX-DISC1', 'SKINTL', 'DSCR10', 'TSPAN16', 'LINC00597', 'CHRNA9', 'HTR1B', 'TMEM8C', 'PRAC1', 'HAVCR1', 'SLC38A8', 'LEUTX', 'F11', 'OR4X2', 'HNRNPCL1', 'FMO9P', 'C7ORF57', 'GPR61', 'NEUROG3', 'AHSG', 'PSG11', 'KRTAP7-1', 'GPHA2', 'DACH2', 'HSD52', 'BRINP3', 'ACSM2B', 'B4GALNT2', 'CALR3', 'SPATA45', 'PPAN-P2RY11', 'SLC4A9', 'POU4F2', 'UGT2B28', 'KRT32', 'SLC25A3P1', 'CCDC63', 'HS3ST4', 'NXNL1', 'SLC9C1', 'GOLGA6L1', 'CPNE6', 'RNF222', 'CELP', 'SSX2', 'ACTBL2', 'VGLL2', 'HPSE2', 'CD1B', 'CLRN1-AS1', 'KRTAP10-7', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 0.9999997880816034 Coefficient of Determination: 1.0 RMSE: 1.9598750369766735e-15 NRMSE: 5.289140208871408e-16 MAPE: 1.418653985341698e-12 Pearson Correlation: 0.11416917726398713 Spearman Correlation: 0.07196349081659373 Coefficient of Determination: -3.049232118843677 RMSE: 0.8390552774146152 NRMSE: 0.40596044077655513 MAPE: 493.3484818824122 Predictor: ElasticNet Pearson Correlation: 0.8502786923859923 Spearman Correlation: 0.8199385255491053 Coefficient of Determination: 0.6679468514960062 RMSE: 0.27020506827067137 NRMSE: 0.07292059260246915 MAPE: 175.33131296964746 Pearson Correlation: 0.2958822566585826 Spearman Correlation: 0.3075075749074178 Coefficient of Determination: 0.014938041113059852 RMSE: 0.41384337834332824 NRMSE: 0.2002300024884985 MAPE: 204.48388418991743 Predictor: RandomForests Pearson Correlation: 0.5508575873294923 Spearman Correlation: 0.5552225545681899 Coefficient of Determination: 0.2767191393373125 RMSE: 0.3987890052145715 NRMSE: 0.10762170661604911 MAPE: 253.43935827978243 Pearson Correlation: 0.5057378712730369 Spearman Correlation: 0.514053791194404 Coefficient of Determination: 0.21869124943427287 RMSE: 0.36856626450585406 NRMSE: 0.17832355891402046 MAPE: 230.53255982460428
Min-Max
scenario = Scenario.ThousandMostVariableGenes_Mutations
normalizeTechnique = NormalizeTechnique.MinMax
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.266811 | 0.102965 | 0.232299 | 0.000000 | 0.0 | 0.00000 | 0.165596 | 0.256402 | 0.0 | 0.00000 | ... | 0.362558 | 0.154626 | 0.343226 | 0.136973 | 0.283236 | 0.203583 | 0.106969 | 0.050188 | 0.019658 | 0.021305 |
| TCGA-A1-A0SH-01 | 0.074647 | 0.046655 | 0.060467 | 0.000000 | 0.0 | 0.00000 | 0.019946 | 0.108076 | 0.0 | 0.00000 | ... | 0.437102 | 0.171136 | 0.196632 | 0.028737 | 0.498917 | 0.208787 | 0.168174 | 0.119445 | 0.172767 | 0.000000 |
| TCGA-A1-A0SJ-01 | 0.122769 | 0.097168 | 0.035285 | 0.088368 | 0.0 | 0.00000 | 0.020200 | 0.129369 | 0.0 | 0.29443 | ... | 0.415293 | 0.914898 | 0.215818 | 0.074090 | 0.379839 | 0.104565 | 0.110857 | 0.079787 | 0.016343 | 0.000000 |
| TCGA-A1-A0SK-01 | 0.716855 | 1.000000 | 0.116251 | 0.076144 | 0.0 | 0.01449 | 0.000000 | 0.094313 | 0.0 | 0.00000 | ... | 0.334733 | 0.181185 | 0.763246 | 0.229344 | 0.511470 | 0.000000 | 0.246798 | 0.166438 | 0.018601 | 0.000000 |
| TCGA-A1-A0SQ-01 | 0.025757 | 0.011574 | 0.044865 | 0.000000 | 0.0 | 0.00000 | 0.022276 | 0.153652 | 0.0 | 0.00000 | ... | 0.537294 | 0.183640 | 0.239462 | 0.036770 | 0.323545 | 0.099038 | 0.071604 | 0.075950 | 0.006561 | 0.000000 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 1.1105892668755528e-15 NRMSE: 4.2059809387447556e-16 MAPE: 5.8770035463701616e-12 Pearson Correlation: 0.09304215405665325 Spearman Correlation: 0.06326699834162522 Coefficient of Determination: -1.0772338806221242 RMSE: 0.40422512881762196 NRMSE: 0.1996932803177613 MAPE: 596.5220823089682 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: RandomForests Pearson Correlation: 0.6010995724410372 Spearman Correlation: 0.4219205024163514 Coefficient of Determination: 0.2029962083304766 RMSE: 0.2000671547857973 NRMSE: 0.07576866305086055 MAPE: 233.69330777873847 Pearson Correlation: 0.18030423452581562 Spearman Correlation: 0.31141352063213346 Coefficient of Determination: -0.0033572225923930166 RMSE: 0.28093665036276305 NRMSE: 0.13878692162588394 MAPE: 132.81048607025335 Protein: CDH1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 4.349519474976985e-15 NRMSE: 7.310976879594213e-16 MAPE: 3.4318543064374328e-12 Pearson Correlation: 0.5057495466904272 Spearman Correlation: 0.511096478392352 Coefficient of Determination: -0.1639561434579908 RMSE: 1.2518162624570754 NRMSE: 0.20274954851755295 MAPE: 675.4420551639835 Predictor: ElasticNet Pearson Correlation: 0.7045585452483092 Spearman Correlation: 0.6777558749419192 Coefficient of Determination: 0.4131577463252035 RMSE: 0.8644420599467867 NRMSE: 0.1453014741140616 MAPE: 396.7994258443187 Pearson Correlation: 0.6945982726665385 Spearman Correlation: 0.6267095893083602 Coefficient of Determination: 0.41603062658368795 RMSE: 0.8866808240296142 NRMSE: 0.1436106417073652 MAPE: 254.21842006478914 Predictor: RandomForests Pearson Correlation: 0.7539240140819194 Spearman Correlation: 0.6976327555443462 Coefficient of Determination: 0.5615514658681879 RMSE: 0.7471959559052774 NRMSE: 0.12559392800922417 MAPE: 262.32938491974795 Pearson Correlation: 0.7572070574205366 Spearman Correlation: 0.6799824407374891 Coefficient of Determination: 0.5660162731589018 RMSE: 0.764379450947814 NRMSE: 0.12380218505196042 MAPE: 128.368241719208 Protein: CDH2 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999031343205 Coefficient of Determination: 1.0 RMSE: 2.652525729217385e-15 NRMSE: 9.799235756491391e-16 MAPE: 4.9141855913228337e-11 Pearson Correlation: 0.17368469019687807 Spearman Correlation: 0.16855916495951617 Coefficient of Determination: -1.2223995635847005 RMSE: 0.5592107240647156 NRMSE: 0.28859509937798195 MAPE: 352.4719234730987 Predictor: ElasticNet Pearson Correlation: 0.21001817214942123 Spearman Correlation: 0.1760177343244354 Coefficient of Determination: 0.0006093154897411912 RMSE: 0.3710813581224831 NRMSE: 0.13708872539962508 MAPE: 453.82113326721105 Pearson Correlation: 0.16470896174495694 Spearman Correlation: 0.2027558286996391 Coefficient of Determination: 0.00021407511815640934 RMSE: 0.37507483681747555 NRMSE: 0.1935670314380325 MAPE: 105.23185562012493 Predictor: RandomForests Pearson Correlation: 0.5731705381978709 Spearman Correlation: 0.5481780175070027 Coefficient of Determination: 0.1824038745759038 RMSE: 0.3356378274228796 NRMSE: 0.12399480855116043 MAPE: 405.41848839379327 Pearson Correlation: 0.023530380004953402 Spearman Correlation: 0.2443859135694079 Coefficient of Determination: -0.008260721001823512 RMSE: 0.3766611639391269 NRMSE: 0.19438569641282288 MAPE: 103.75688779629763 Protein: CDH3 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 8.522901837540327e-16 NRMSE: 5.979473141901223e-16 MAPE: 2.7650767573833716e-12 Pearson Correlation: 0.18550434137066885 Spearman Correlation: 0.22993366500829193 Coefficient of Determination: -1.1024295705570646 RMSE: 0.29663505358631337 NRMSE: 0.22704384473621583 MAPE: 749.8114398036801 Predictor: ElasticNet Pearson Correlation: 0.3872413938256142 Spearman Correlation: 0.40009410694214803 Coefficient of Determination: 0.02570958898600939 RMSE: 0.20609821745795415 NRMSE: 0.14459379908090178 MAPE: 122.14288754258065 Pearson Correlation: 0.46905983702453685 Spearman Correlation: 0.49472246610086823 Coefficient of Determination: 0.03492666544221923 RMSE: 0.20097493668478722 NRMSE: 0.15382579290230247 MAPE: 119.00881456120584 Predictor: RandomForests Pearson Correlation: 0.6037314803404041 Spearman Correlation: 0.6027994839229228 Coefficient of Determination: 0.2871492432873025 RMSE: 0.17629067025212658 NRMSE: 0.12368150520017861 MAPE: 369.5692452723831 Pearson Correlation: 0.497972227601768 Spearman Correlation: 0.5247244171300361 Coefficient of Determination: 0.2215513379784434 RMSE: 0.18049980238431806 NRMSE: 0.13815416826837762 MAPE: 280.0701920659642 Protein: PTEN x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 2.6357738977437954e-15 NRMSE: 4.1212945004202884e-16 MAPE: 2.9400741977478134e-12 Pearson Correlation: 0.15887946249216725 Spearman Correlation: 0.14776119402985075 Coefficient of Determination: -1.9497972256307232 RMSE: 0.8530231339710014 NRMSE: 0.2811360931945822 MAPE: 528.4711014655395 Predictor: ElasticNet Pearson Correlation: 0.48889365985270833 Spearman Correlation: 0.4664545644190834 Coefficient of Determination: 0.1359767385029249 RMSE: 0.5823255620705597 NRMSE: 0.09105239028544442 MAPE: 456.84288000828997 Pearson Correlation: 0.2012429374021526 Spearman Correlation: 0.259316164276656 Coefficient of Determination: 0.037635273439733274 RMSE: 0.48723062280833257 NRMSE: 0.16057960016094278 MAPE: 153.6817957910148 Predictor: RandomForests Pearson Correlation: 0.6097956102299927 Spearman Correlation: 0.5511572407402248 Coefficient of Determination: 0.30583665922874226 RMSE: 0.52195609631925 NRMSE: 0.08161302420752872 MAPE: 283.29227565613843 Pearson Correlation: 0.2565557386211946 Spearman Correlation: 0.3108918352503839 Coefficient of Determination: 0.03734784212763276 RMSE: 0.48730337842686455 NRMSE: 0.1606035786786845 MAPE: 172.10910652495656 Protein: BRCA2 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 0.9999999031343205 Coefficient of Determination: 1.0 RMSE: 9.659641095740047e-16 NRMSE: 6.248716633938421e-16 MAPE: 2.0428120812320618e-12 Pearson Correlation: 0.018121997175456032 Spearman Correlation: 0.014718094232395871 Coefficient of Determination: -2.1668066611058685 RMSE: 0.32874501544669 NRMSE: 0.32900822202430946 MAPE: 495.4043614843626 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: RandomForests Pearson Correlation: 0.5579775557088766 Spearman Correlation: 0.5261299929344257 Coefficient of Determination: 0.2305079797640167 RMSE: 0.17334594014068463 NRMSE: 0.11213560098630189 MAPE: 163.69837275192447 Pearson Correlation: 0.35843014787447414 Spearman Correlation: 0.34246944501713716 Coefficient of Determination: 0.11019184438454177 RMSE: 0.1742595518176209 NRMSE: 0.17439907107448052 MAPE: 151.3802822459693 Protein: CDKN2A x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 3.144668743354203e-15 NRMSE: 7.109005862674811e-16 MAPE: 3.293510763093636e-12 Pearson Correlation: 0.39968484756046346 Spearman Correlation: 0.3324943907911424 Coefficient of Determination: -0.24618844952512564 RMSE: 0.8337462860747336 NRMSE: 0.22515427655272308 MAPE: 517.805153525926 Predictor: ElasticNet Pearson Correlation: 0.48470088450615834 Spearman Correlation: 0.39150394250084436 Coefficient of Determination: 0.15892614912070946 RMSE: 0.5894341903340619 NRMSE: 0.13325063644943186 MAPE: 159.7271592905951 Pearson Correlation: 0.5357615424419049 Spearman Correlation: 0.3940493610379476 Coefficient of Determination: 0.15734362628654686 RMSE: 0.6855944710631153 NRMSE: 0.1851456848671659 MAPE: 401.81657198917014 Predictor: RandomForests Pearson Correlation: 0.6576913346530591 Spearman Correlation: 0.6208576030528805 Coefficient of Determination: 0.4191828071607575 RMSE: 0.4898216646770415 NRMSE: 0.11073169767764021 MAPE: 167.93332086398664 Pearson Correlation: 0.7040517636811795 Spearman Correlation: 0.6126392855331982 Coefficient of Determination: 0.4522299299844865 RMSE: 0.5527658456691611 NRMSE: 0.14927514060738892 MAPE: 251.23903091105103 Protein: TP53 x_train_column_count: 1001 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.801555620106396e-15 NRMSE: 4.3296217738678115e-16 MAPE: 4.937717421388165e-12 Pearson Correlation: 0.3362815777818592 Spearman Correlation: 0.3841430104380061 Coefficient of Determination: -0.8641939835216788 RMSE: 0.5743195882047223 NRMSE: 0.20652291999162944 MAPE: 1046.557763189288 Predictor: ElasticNet Pearson Correlation: 0.48748623297728966 Spearman Correlation: 0.4727241462554703 Coefficient of Determination: 0.18427853520959003 RMSE: 0.4089744089058369 NRMSE: 0.0982875291770817 MAPE: 542.8871824260805 Pearson Correlation: 0.529872273050651 Spearman Correlation: 0.4707589503463077 Coefficient of Determination: 0.22142890973382356 RMSE: 0.3711566230859456 NRMSE: 0.13346636811318122 MAPE: 598.3212603557769 Predictor: RandomForests Pearson Correlation: 0.6530591557775642 Spearman Correlation: 0.5980284463118771 Coefficient of Determination: 0.36868372481543554 RMSE: 0.35978966242126675 NRMSE: 0.08646711425649287 MAPE: 608.440839032735 Pearson Correlation: 0.4919579374581136 Spearman Correlation: 0.4747244171300362 Coefficient of Determination: 0.24067670404353358 RMSE: 0.3665400544434684 NRMSE: 0.13180626935289597 MAPE: 405.50694494350495 Protein: CTNNB1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 3.495910175198213e-15 NRMSE: 7.045791110301335e-16 MAPE: 4.895160780431582e-12 Pearson Correlation: 0.35060317709700484 Spearman Correlation: 0.3570919910252659 Coefficient of Determination: -0.4373090598082867 RMSE: 0.9003069340278274 NRMSE: 0.22336796854756796 MAPE: 483.8614369352401 Predictor: ElasticNet Pearson Correlation: 0.565215177880575 Spearman Correlation: 0.5627030219824448 Coefficient of Determination: 0.21183047541254996 RMSE: 0.6545093605898272 NRMSE: 0.13191232049294138 MAPE: 663.9527203508269 Pearson Correlation: 0.49460791154423644 Spearman Correlation: 0.4421763730367769 Coefficient of Determination: 0.16632642336184844 RMSE: 0.6856674479677582 NRMSE: 0.17011547858079648 MAPE: 322.2376819780364 Predictor: RandomForests Pearson Correlation: 0.6652546969681674 Spearman Correlation: 0.6563464812409641 Coefficient of Determination: 0.27155314507234574 RMSE: 0.6292235652634461 NRMSE: 0.12681612456687147 MAPE: 567.579297849048 Pearson Correlation: 0.49808392229561893 Spearman Correlation: 0.4318456735928203 Coefficient of Determination: 0.15534330384498618 RMSE: 0.6901692856904951 NRMSE: 0.17123239361149584 MAPE: 313.07857941259954 Protein: CCNE1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 1.836767862303309e-15 NRMSE: 4.432675778418585e-16 MAPE: 3.993443457260367e-13 Pearson Correlation: 0.5605219902586247 Spearman Correlation: 0.4809920983318701 Coefficient of Determination: 0.12615937010047285 RMSE: 0.5020220197610828 NRMSE: 0.17881461077865818 MAPE: 68.93246552870934 Predictor: ElasticNet Pearson Correlation: 0.6829398802817594 Spearman Correlation: 0.6350092710140891 Coefficient of Determination: 0.39060851628965776 RMSE: 0.3775707850958363 NRMSE: 0.09111923766098808 MAPE: 79.92626342806895 Pearson Correlation: 0.7337147993880642 Spearman Correlation: 0.6065164374207395 Coefficient of Determination: 0.41009840423185007 RMSE: 0.41247386417246973 NRMSE: 0.14691856248351548 MAPE: 58.77599650235469 Predictor: RandomForests Pearson Correlation: 0.8603558348817969 Spearman Correlation: 0.720992183449922 Coefficient of Determination: 0.7329935450964387 RMSE: 0.2499257896505922 NRMSE: 0.06031464383294934 MAPE: 54.60233031142965 Pearson Correlation: 0.8421161855192729 Spearman Correlation: 0.7066369834770418 Coefficient of Determination: 0.7041856173403227 RMSE: 0.29208973366029317 NRMSE: 0.10403908589859062 MAPE: 45.0862666913246 Protein: CCND1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.1287805968878051e-15 NRMSE: 6.78590251943469e-16 MAPE: 3.285956594164427e-12 Pearson Correlation: 0.3864028220964456 Spearman Correlation: 0.33825968198224565 Coefficient of Determination: -1.2246747073161641 RMSE: 0.3504319973583577 NRMSE: 0.2495812185618752 MAPE: 2022.748583634772 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: RandomForests Pearson Correlation: 0.5699695778202665 Spearman Correlation: 0.5419950776350307 Coefficient of Determination: 0.2613879878898565 RMSE: 0.20531157626078528 NRMSE: 0.1234273822971861 MAPE: 323.7796850572301 Pearson Correlation: 0.49844268688039983 Spearman Correlation: 0.48550385328260665 Coefficient of Determination: 0.2184352736989098 RMSE: 0.20770787883215547 NRMSE: 0.14793165548412873 MAPE: 975.2064735645499 Protein: ERBB2 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 3.619428403888521e-15 NRMSE: 6.166291980660887e-16 MAPE: 5.337654193596598e-12 Pearson Correlation: 0.5318758507311406 Spearman Correlation: 0.44897570968685996 Coefficient of Determination: -0.15074234177685142 RMSE: 0.9730064490655753 NRMSE: 0.18042025756825059 MAPE: 749.7672345299944 Predictor: ElasticNet Pearson Correlation: 0.7459722678767905 Spearman Correlation: 0.6307018867690593 Coefficient of Determination: 0.39777397163527906 RMSE: 0.7908832269279588 NRMSE: 0.1347399742623914 MAPE: 944.1020575271164 Pearson Correlation: 0.6069867988467795 Spearman Correlation: 0.523373329431275 Coefficient of Determination: 0.3014971541840106 RMSE: 0.7580725343175396 NRMSE: 0.1405660178597329 MAPE: 597.7289772485033 Predictor: RandomForests Pearson Correlation: 0.8533284250611247 Spearman Correlation: 0.6881374984746499 Coefficient of Determination: 0.7243930129152757 RMSE: 0.5350294845289789 NRMSE: 0.09115107833943455 MAPE: 470.3514598554065 Pearson Correlation: 0.7881358641801293 Spearman Correlation: 0.6523082482212212 Coefficient of Determination: 0.6163849594135964 RMSE: 0.5617906221245627 NRMSE: 0.10417033601419667 MAPE: 379.6285127303171 Protein: ERBB3 x_train_column_count: 1001 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 2.4081881693006856e-15 NRMSE: 6.49900867987242e-16 MAPE: 1.9264648082547603e-12 Pearson Correlation: 0.24043087178041683 Spearman Correlation: 0.20587772641431556 Coefficient of Determination: -1.3611979702513048 RMSE: 0.7153254650164519 NRMSE: 0.28703031306836313 MAPE: 782.5323299996917 Predictor: ElasticNet Pearson Correlation: 0.4489839717820647 Spearman Correlation: 0.45852074097594525 Coefficient of Determination: 0.11747798872932291 RMSE: 0.43132649017764624 NRMSE: 0.11640263992898235 MAPE: 206.50649217568414 Pearson Correlation: 0.38260079067696756 Spearman Correlation: 0.38565796709857847 Coefficient of Determination: 0.08989699571987086 RMSE: 0.44410203091558204 NRMSE: 0.1781996464575236 MAPE: 231.89228737886367 Predictor: RandomForests Pearson Correlation: 0.5897309596107656 Spearman Correlation: 0.5626075406080111 Coefficient of Determination: 0.31311780724516336 RMSE: 0.3805261325059239 NRMSE: 0.10269308144605782 MAPE: 232.53467040286512 Pearson Correlation: 0.37482847083147497 Spearman Correlation: 0.3397140738952878 Coefficient of Determination: 0.1318944533863462 RMSE: 0.43373428300407996 NRMSE: 0.17403950107700947 MAPE: 274.5762305845822 Fold: 2 Protein: RB1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 1.4204151178799762e-15 NRMSE: 5.194613508923259e-16 MAPE: 6.547592653015997e-12 Pearson Correlation: 0.005735656484769857 Spearman Correlation: 0.11872500243878649 Coefficient of Determination: -2.1945036691578377 RMSE: 0.43772125930002276 NRMSE: 0.250782768216259 MAPE: 1038.077177141916 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: RandomForests Pearson Correlation: 0.6510633847860512 Spearman Correlation: 0.48716213878350123 Coefficient of Determination: 0.224973621626415 RMSE: 0.20691983482652893 NRMSE: 0.07567284772766564 MAPE: 186.96223477632097 Pearson Correlation: 0.05546513502419219 Spearman Correlation: 0.1953565505804312 Coefficient of Determination: -0.03786564721609387 RMSE: 0.24949768079043425 NRMSE: 0.1429442087236506 MAPE: 241.76001093182316 Protein: CDH1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 4.8520409701436465e-15 NRMSE: 7.783814823363514e-16 MAPE: 4.0444957701443355e-12 Pearson Correlation: 0.4794613426641831 Spearman Correlation: 0.4302263193834749 Coefficient of Determination: -0.33710011819249575 RMSE: 1.3304968580427676 NRMSE: 0.23628074197172216 MAPE: 651.2349622632273 Predictor: ElasticNet Pearson Correlation: 0.7018641563759425 Spearman Correlation: 0.6504937669650542 Coefficient of Determination: 0.40345017395135596 RMSE: 0.8655117059217848 NRMSE: 0.13884843281010426 MAPE: 377.8605694625965 Pearson Correlation: 0.6850695516349901 Spearman Correlation: 0.7116915422885572 Coefficient of Determination: 0.37428777004161395 RMSE: 0.9101630732672354 NRMSE: 0.16163435859833697 MAPE: 168.1180216684691 Predictor: RandomForests Pearson Correlation: 0.7755393207989952 Spearman Correlation: 0.6574477344674263 Coefficient of Determination: 0.5963007943534928 RMSE: 0.711997603324103 NRMSE: 0.11422116039530007 MAPE: 134.6835167738091 Pearson Correlation: 0.6528950616836816 Spearman Correlation: 0.6376694956589601 Coefficient of Determination: 0.3878365448928225 RMSE: 0.9002550981953817 NRMSE: 0.15987481765146186 MAPE: 206.51054014306013 Protein: CDH2 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 1.882848606359875e-15 NRMSE: 6.822409617942877e-16 MAPE: 2.412332118635833e-11 Pearson Correlation: 0.16610551228389112 Spearman Correlation: 0.208750365817969 Coefficient of Determination: -1.2040140001574025 RMSE: 0.5746565089872949 NRMSE: 0.3027423829200203 MAPE: 689.3094246670881 Predictor: ElasticNet Pearson Correlation: 0.19716831164570803 Spearman Correlation: 0.19732507366150534 Coefficient of Determination: 0.0011334755334002633 RMSE: 0.3678896118262428 NRMSE: 0.13330299725568623 MAPE: 465.0045282878306 Pearson Correlation: 0.09995972028482622 Spearman Correlation: 0.1055701882743147 Coefficient of Determination: 0.00035544274818344324 RMSE: 0.38701157879230363 NRMSE: 0.20388667969270596 MAPE: 137.23938137635673 Predictor: RandomForests Pearson Correlation: 0.5681753718214327 Spearman Correlation: 0.572623240749764 Coefficient of Determination: 0.17356609777736753 RMSE: 0.3346322994726386 NRMSE: 0.12125237316930162 MAPE: 643.1269429369818 Pearson Correlation: 0.2797057158211419 Spearman Correlation: 0.3278265535069749 Coefficient of Determination: 0.052882438983841706 RMSE: 0.3767064882200845 NRMSE: 0.19845771886611027 MAPE: 115.7034170246187 Protein: CDH3 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 8.19048670879569e-16 NRMSE: 6.164146748245083e-16 MAPE: 2.9600460490175165e-12 Pearson Correlation: 0.22446599877060722 Spearman Correlation: 0.26533996683250416 Coefficient of Determination: -1.6476186452477921 RMSE: 0.3220578174827125 NRMSE: 0.2650027297644306 MAPE: 748.2418535862854 Predictor: ElasticNet Pearson Correlation: 0.46694224296669445 Spearman Correlation: 0.4676263084858018 Coefficient of Determination: 0.06091847806020101 RMSE: 0.20128071531786348 NRMSE: 0.15148353338741766 MAPE: 128.58030755332453 Pearson Correlation: 0.23153940635049658 Spearman Correlation: 0.28577211979319095 Coefficient of Determination: -0.1083062342445722 RMSE: 0.2083703965038842 NRMSE: 0.17145593392897576 MAPE: 489.1408534823054 Predictor: RandomForests Pearson Correlation: 0.623030779213017 Spearman Correlation: 0.612915720854038 Coefficient of Determination: 0.32957898545288566 RMSE: 0.17006867536252332 NRMSE: 0.1279934037483336 MAPE: 241.98391563185407 Pearson Correlation: 0.2505629900637167 Spearman Correlation: 0.3225587747536826 Coefficient of Determination: -0.0798118275999744 RMSE: 0.2056743673688277 NRMSE: 0.1692375276629867 MAPE: 1524.2772472835693 Protein: PTEN x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 2.5773545343054107e-15 NRMSE: 4.029950018458933e-16 MAPE: 4.715346630550666e-12 Pearson Correlation: 0.1943273563201913 Spearman Correlation: 0.14134718564042534 Coefficient of Determination: -2.421867586449929 RMSE: 0.9464283528269978 NRMSE: 0.3174229785440696 MAPE: 5882.84675533358 Predictor: ElasticNet Pearson Correlation: 0.44893381820356093 Spearman Correlation: 0.4393050531025378 Coefficient of Determination: 0.11615967501350943 RMSE: 0.5864043740715329 NRMSE: 0.09169015308756671 MAPE: 317.3765248227256 Pearson Correlation: 0.28534055451929596 Spearman Correlation: 0.2695785776997367 Coefficient of Determination: 0.07236569278521088 RMSE: 0.4927703214987496 NRMSE: 0.16527043248549425 MAPE: 487.6064730241669 Predictor: RandomForests Pearson Correlation: 0.6004553443372214 Spearman Correlation: 0.5500654788537584 Coefficient of Determination: 0.3100680531545976 RMSE: 0.5180997975069213 NRMSE: 0.08101005355436186 MAPE: 241.60379591147242 Pearson Correlation: 0.3044596025667019 Spearman Correlation: 0.30696441399765884 Coefficient of Determination: 0.07985725956324297 RMSE: 0.4907764833197626 NRMSE: 0.1646017183122359 MAPE: 509.28894872642553 Protein: BRCA2 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999225074571 Coefficient of Determination: 1.0 RMSE: 9.123713412158427e-16 NRMSE: 5.877734522247336e-16 MAPE: 3.360745099025512e-12 Pearson Correlation: -0.029708082566415876 Spearman Correlation: 0.03251390108282119 Coefficient of Determination: -1.9742873458198678 RMSE: 0.33317396459676696 NRMSE: 0.22552440185792405 MAPE: 518.7793329279381 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: RandomForests Pearson Correlation: 0.6178261031034837 Spearman Correlation: 0.5397349615447131 Coefficient of Determination: 0.22637104249417161 RMSE: 0.17179987655899795 NRMSE: 0.11067796847092798 MAPE: 159.40796543987403 Pearson Correlation: 0.3912345684646045 Spearman Correlation: 0.37279289825382894 Coefficient of Determination: 0.09738464312776085 RMSE: 0.18354009584427516 NRMSE: 0.12423770981722104 MAPE: 152.63153514992467 Protein: CDKN2A x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 2.786871876751703e-15 NRMSE: 6.300151185151356e-16 MAPE: 3.405730991630895e-12 Pearson Correlation: 0.15895719924609744 Spearman Correlation: 0.16157448053848406 Coefficient of Determination: -0.8825571235922236 RMSE: 0.923991618769526 NRMSE: 0.24961952095567483 MAPE: 499.6102933519443 Predictor: ElasticNet Pearson Correlation: 0.5097264772637693 Spearman Correlation: 0.38996927265812115 Coefficient of Determination: 0.18316446520709373 RMSE: 0.5995242763546443 NRMSE: 0.1355316551044748 MAPE: 243.70161044493906 Pearson Correlation: 0.4790416209946821 Spearman Correlation: 0.4233294312749976 Coefficient of Determination: 0.15935642325185895 RMSE: 0.6174473055807924 NRMSE: 0.16680551804106128 MAPE: 189.23909834569903 Predictor: RandomForests Pearson Correlation: 0.6656357106600346 Spearman Correlation: 0.6425351793374043 Coefficient of Determination: 0.4268019926568297 RMSE: 0.5022174495695275 NRMSE: 0.11353395491568384 MAPE: 158.66576068752212 Pearson Correlation: 0.6905407574973447 Spearman Correlation: 0.5513266998341626 Coefficient of Determination: 0.4343569512464277 RMSE: 0.5064833552208353 NRMSE: 0.13682822434105124 MAPE: 124.52526356239859 Protein: TP53 x_train_column_count: 1001 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.5476835681219156e-15 NRMSE: 6.823847778550732e-16 MAPE: 4.209467711822812e-12 Pearson Correlation: 0.23719793180009743 Spearman Correlation: 0.2854063018242123 Coefficient of Determination: -1.1088898542768169 RMSE: 0.5945074042277578 NRMSE: 0.1957870588597918 MAPE: 2001.337920618533 Predictor: ElasticNet Pearson Correlation: 0.49008557943462416 Spearman Correlation: 0.49147207175592345 Coefficient of Determination: 0.19232173318785306 RMSE: 0.40920236393929377 NRMSE: 0.10960288306931668 MAPE: 324.7902675326891 Pearson Correlation: 0.44055834265387717 Spearman Correlation: 0.4434103989854649 Coefficient of Determination: 0.16528487705522155 RMSE: 0.3740239910526728 NRMSE: 0.12317602208222388 MAPE: 1721.334437305324 Predictor: RandomForests Pearson Correlation: 0.6505453354646915 Spearman Correlation: 0.5819069248692361 Coefficient of Determination: 0.36529986789386737 RMSE: 0.36274649919177704 NRMSE: 0.0971599033592546 MAPE: 354.6929875131954 Pearson Correlation: 0.6336804868102075 Spearman Correlation: 0.47527070529704424 Coefficient of Determination: 0.34763982816256334 RMSE: 0.3306541960671895 NRMSE: 0.10889319811203342 MAPE: 1879.1378770775584 Protein: CTNNB1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 4.432692704749211e-15 NRMSE: 8.71890775914479e-16 MAPE: 4.495443851106007e-12 Pearson Correlation: 0.38545677722966626 Spearman Correlation: 0.3800946249146425 Coefficient of Determination: -0.4475819443157245 RMSE: 0.9222594506234754 NRMSE: 0.22952625634590365 MAPE: 309.3896477284779 Predictor: ElasticNet Pearson Correlation: 0.5420312116579821 Spearman Correlation: 0.5153468075173743 Coefficient of Determination: 0.1998386226382125 RMSE: 0.6485104324877792 NRMSE: 0.12755909372300928 MAPE: 647.6953782355914 Pearson Correlation: 0.4721703908029855 Spearman Correlation: 0.4993073846454005 Coefficient of Determination: 0.06239513175016442 RMSE: 0.7422350558951895 NRMSE: 0.18472289288349955 MAPE: 242.71416401840926 Predictor: RandomForests Pearson Correlation: 0.6411615345867451 Spearman Correlation: 0.603102270649725 Coefficient of Determination: 0.26669845429959627 RMSE: 0.6208253967230942 NRMSE: 0.12211357134600595 MAPE: 576.1081607697678 Pearson Correlation: 0.42242886977622174 Spearman Correlation: 0.4529899521997854 Coefficient of Determination: 0.044184377820076226 RMSE: 0.7494084707751041 NRMSE: 0.18650816823252386 MAPE: 223.6266986777467 Protein: CCNE1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.4915173402313476e-15 NRMSE: 3.599481961124955e-16 MAPE: 3.234896122105964e-13 Pearson Correlation: 0.5254525580447781 Spearman Correlation: 0.3880792117842162 Coefficient of Determination: -0.28560487738869433 RMSE: 0.4742571909354957 NRMSE: 0.257749874149042 MAPE: 75.9459968175346 Predictor: ElasticNet Pearson Correlation: 0.6948260601642733 Spearman Correlation: 0.6299833637075035 Coefficient of Determination: 0.41035718371838314 RMSE: 0.3937675140121272 NRMSE: 0.09502799768615662 MAPE: 76.76300093688906 Pearson Correlation: 0.736681981424889 Spearman Correlation: 0.657740708223588 Coefficient of Determination: 0.5015001671878198 RMSE: 0.29531987600491855 NRMSE: 0.16050080489835195 MAPE: 50.891804007025954 Predictor: RandomForests Pearson Correlation: 0.8619476224803658 Spearman Correlation: 0.7113375085699593 Coefficient of Determination: 0.737467871406583 RMSE: 0.26274629927004944 NRMSE: 0.06340862013901813 MAPE: 68.20906830824043 Pearson Correlation: 0.841688223665837 Spearman Correlation: 0.7380381890693234 Coefficient of Determination: 0.7053264201932463 RMSE: 0.2270548423602733 NRMSE: 0.12340004150037409 MAPE: 41.11855011846185 Protein: CCND1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.0723679150460816e-15 NRMSE: 6.446765790035479e-16 MAPE: 2.6524658544600285e-12 Pearson Correlation: 0.11189982161123399 Spearman Correlation: 0.2395229733684519 Coefficient of Determination: -1.275666590568493 RMSE: 0.3551529439324539 NRMSE: 0.27476708542153083 MAPE: 685.8580999097283 Predictor: ElasticNet Pearson Correlation: 0.2553211072643501 Spearman Correlation: 0.2013501874186171 Coefficient of Determination: 0.0010956886527865306 RMSE: 0.23861317613783342 NRMSE: 0.14344734110316903 MAPE: 629.5364547656819 Pearson Correlation: 0.06978611061687223 Spearman Correlation: 0.08860598965954541 Coefficient of Determination: -0.0017641462745487946 RMSE: 0.2356371949239719 NRMSE: 0.18230271316145627 MAPE: 420.4752730384974 Predictor: RandomForests Pearson Correlation: 0.5885228910078543 Spearman Correlation: 0.5785614830956511 Coefficient of Determination: 0.30879675815692875 RMSE: 0.1984885051441292 NRMSE: 0.11932554925642905 MAPE: 473.29993467262454 Pearson Correlation: 0.2522343600864035 Spearman Correlation: 0.41126719344454205 Coefficient of Determination: 0.04217803174696877 RMSE: 0.23041115395697248 NRMSE: 0.1782595422703569 MAPE: 302.43983901968477 Protein: ERBB2 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 4.75366924319661e-15 NRMSE: 8.530892527675484e-16 MAPE: 3.600159650146899e-12 Pearson Correlation: 0.506243309655763 Spearman Correlation: 0.3264852209540533 Coefficient of Determination: -0.01203606607434704 RMSE: 1.0635448436264634 NRMSE: 0.18119236820049806 MAPE: 3022.4766607765455 Predictor: ElasticNet Pearson Correlation: 0.7418907590154726 Spearman Correlation: 0.6376743294071293 Coefficient of Determination: 0.3963152825721704 RMSE: 0.7637697671025645 NRMSE: 0.13706544283376065 MAPE: 371.2045683058243 Pearson Correlation: 0.6077125400247669 Spearman Correlation: 0.4548726953467955 Coefficient of Determination: 0.2738319932649449 RMSE: 0.9008995436992605 NRMSE: 0.1534830645006151 MAPE: 2465.7528960092077 Predictor: RandomForests Pearson Correlation: 0.8524511150010189 Spearman Correlation: 0.7049007198527967 Coefficient of Determination: 0.7225617669780824 RMSE: 0.5177743444266093 NRMSE: 0.09291932315679509 MAPE: 259.5142430638204 Pearson Correlation: 0.8101660072667367 Spearman Correlation: 0.5454324223929458 Coefficient of Determination: 0.6350922486970668 RMSE: 0.6386300586384832 NRMSE: 0.1088011412233135 MAPE: 1387.1006008937893 Protein: ERBB3 x_train_column_count: 1001 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999997868954927 Coefficient of Determination: 1.0 RMSE: 2.0753527840024775e-15 NRMSE: 5.60078150410738e-16 MAPE: 1.4411895381821774e-12 Pearson Correlation: 0.17220221871452077 Spearman Correlation: 0.12671446688127988 Coefficient of Determination: -0.9416227621712621 RMSE: 0.7214793622713379 NRMSE: 0.2662688311779044 MAPE: 562.7346781308695 Predictor: ElasticNet Pearson Correlation: 0.44421480393095375 Spearman Correlation: 0.45785248637095854 Coefficient of Determination: 0.11484676741558808 RMSE: 0.41879267706694817 NRMSE: 0.11302012351117352 MAPE: 198.22309228337824 Pearson Correlation: 0.3518999184328332 Spearman Correlation: 0.34283972295385823 Coefficient of Determination: 0.07658954173187427 RMSE: 0.49755246231352024 NRMSE: 0.1836264757079559 MAPE: 301.2969944307845 Predictor: RandomForests Pearson Correlation: 0.5891209667118869 Spearman Correlation: 0.5978494408676805 Coefficient of Determination: 0.31513411866319496 RMSE: 0.36837709159943427 NRMSE: 0.09941440400257842 MAPE: 193.36353095598355 Pearson Correlation: 0.41291580865625 Spearman Correlation: 0.455155594576139 Coefficient of Determination: 0.15908264456341792 RMSE: 0.4748081263406879 NRMSE: 0.17523246186348782 MAPE: 370.2676380767453 Fold: 3 Protein: RB1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.146692921990665e-15 NRMSE: 4.1935814876779736e-16 MAPE: 5.7632825543466955e-12 Pearson Correlation: 0.02815048843966617 Spearman Correlation: -0.001952642801032432 Coefficient of Determination: -2.251126525626709 RMSE: 0.3996816419874312 NRMSE: 0.28045079219405195 MAPE: 1117.9637836556028 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: RandomForests Pearson Correlation: 0.641819931260157 Spearman Correlation: 0.443708351295022 Coefficient of Determination: 0.19128368235491966 RMSE: 0.2163513905869538 NRMSE: 0.07912207087000944 MAPE: 234.77694184307464 Pearson Correlation: 0.25715777084156416 Spearman Correlation: 0.22656890983678102 Coefficient of Determination: 0.025865188820097473 RMSE: 0.21877958632585692 NRMSE: 0.15351445214214526 MAPE: 206.62783363190988 Protein: CDH1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.9014461799566465e-15 NRMSE: 7.804602050821066e-16 MAPE: 6.6010309730321195e-12 Pearson Correlation: 0.4441977706480546 Spearman Correlation: 0.28329779673063255 Coefficient of Determination: -0.8643737358342376 RMSE: 1.2855980531521984 NRMSE: 0.2527421171612076 MAPE: 634.6416923389775 Predictor: ElasticNet Pearson Correlation: 0.7097314124725783 Spearman Correlation: 0.6958703928800974 Coefficient of Determination: 0.43840533802107773 RMSE: 0.8803220192584388 NRMSE: 0.14017420134047304 MAPE: 435.66398810687497 Pearson Correlation: 0.5905757186305092 Spearman Correlation: 0.5087719298245614 Coefficient of Determination: 0.2866414996564375 RMSE: 0.795229785504077 NRMSE: 0.1563381798262252 MAPE: 208.64859315408754 Predictor: RandomForests Pearson Correlation: 0.7621909732937344 Spearman Correlation: 0.693349287131415 Coefficient of Determination: 0.5764253822132293 RMSE: 0.7645309003132464 NRMSE: 0.12173671225649603 MAPE: 219.6942139403811 Pearson Correlation: 0.7195157622299854 Spearman Correlation: 0.45360223145240497 Coefficient of Determination: 0.5086256875127781 RMSE: 0.6600015303700156 NRMSE: 0.1297529843844642 MAPE: 147.21260651013947 Protein: CDH2 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 1.8968292242204483e-15 NRMSE: 6.8730677013567955e-16 MAPE: 1.7255436522414578e-11 Pearson Correlation: 0.014945831926266358 Spearman Correlation: 0.06199827928029028 Coefficient of Determination: -1.9233491069903255 RMSE: 0.567610236018653 NRMSE: 0.29907593526390136 MAPE: 17057.889061041296 Predictor: ElasticNet Pearson Correlation: 0.20627374570738485 Spearman Correlation: 0.20662967008392136 Coefficient of Determination: 0.0006957632405428793 RMSE: 0.381105317980881 NRMSE: 0.13809164359043447 MAPE: 299.573058555777 Pearson Correlation: -0.07909679417979144 Spearman Correlation: -0.04423745931994165 Coefficient of Determination: -0.0027698707586727433 RMSE: 0.3324378891543801 NRMSE: 0.1751627548392839 MAPE: 597.1315545643507 Predictor: RandomForests Pearson Correlation: 0.5719837083133589 Spearman Correlation: 0.5322154857007497 Coefficient of Determination: 0.18648317383024982 RMSE: 0.343858223125387 NRMSE: 0.1245953413745152 MAPE: 211.45688276180545 Pearson Correlation: -0.02823145360434657 Spearman Correlation: 0.03886083367623038 Coefficient of Determination: -0.025317694712485572 RMSE: 0.33615463508400745 NRMSE: 0.1771211220330092 MAPE: 1316.437340657765 Protein: CDH3 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.9999999999999994 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 8.510674625584329e-16 NRMSE: 5.970894809440653e-16 MAPE: 2.4170914665669775e-12 Pearson Correlation: 0.1310927534589163 Spearman Correlation: 0.10300627189865211 Coefficient of Determination: -1.853645924978708 RMSE: 0.3181380113030422 NRMSE: 0.2767211558995557 MAPE: 537.8156174551423 Predictor: ElasticNet Pearson Correlation: 0.43571353220023573 Spearman Correlation: 0.4476870053463922 Coefficient of Determination: 0.04319729795838945 RMSE: 0.2078700904536803 NRMSE: 0.14583690467929528 MAPE: 159.32221426912474 Pearson Correlation: 0.42115432923417273 Spearman Correlation: 0.4156186486115787 Coefficient of Determination: 0.0407563403257315 RMSE: 0.18445056410554383 NRMSE: 0.16043783355705885 MAPE: 101.95359474461785 Predictor: RandomForests Pearson Correlation: 0.6190886749849553 Spearman Correlation: 0.6288833030630411 Coefficient of Determination: 0.31958447862292316 RMSE: 0.17529434843800953 NRMSE: 0.1229825085859078 MAPE: 479.9498784463866 Pearson Correlation: 0.3429384958921623 Spearman Correlation: 0.34913901669596886 Coefficient of Determination: 0.11313953348288985 RMSE: 0.17735488990029166 NRMSE: 0.15426591100080167 MAPE: 195.20887259267596 Protein: PTEN x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.6671208957210155e-15 NRMSE: 7.297507459496545e-16 MAPE: 9.187276134441297e-12 Pearson Correlation: 0.09521836967952597 Spearman Correlation: 0.18043865883614513 Coefficient of Determination: -2.2290148566379537 RMSE: 0.8462868266230432 NRMSE: 0.2023351089329707 MAPE: 338.09457262878516 Predictor: ElasticNet Pearson Correlation: 0.45747246803126307 Spearman Correlation: 0.44354041778513004 Coefficient of Determination: 0.1207433625433002 RMSE: 0.5900810103176218 NRMSE: 0.0922650317125513 MAPE: 378.02590240166097 Pearson Correlation: 0.22311278846243804 Spearman Correlation: 0.20892280452374717 Coefficient of Determination: 0.005313594124150778 RMSE: 0.46970550517601145 NRMSE: 0.11229988647635716 MAPE: 101.33439385981326 Predictor: RandomForests Pearson Correlation: 0.6103962900452322 Spearman Correlation: 0.5221322102932877 Coefficient of Determination: 0.29354265224668474 RMSE: 0.528928275442422 NRMSE: 0.08270319372096349 MAPE: 254.9732403099192 Pearson Correlation: 0.40301073519373504 Spearman Correlation: 0.4085312784448685 Coefficient of Determination: 0.14706895719413482 RMSE: 0.43495018467770424 NRMSE: 0.10399038509006461 MAPE: 107.20912123029223 Protein: BRCA2 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999807346924 Coefficient of Determination: 1.0 RMSE: 8.664842716339805e-16 NRMSE: 5.839944677122236e-16 MAPE: 3.344424092078686e-12 Pearson Correlation: -0.01901486298843184 Spearman Correlation: -0.016506440229928053 Coefficient of Determination: -1.5125229514841063 RMSE: 0.3394184254042395 NRMSE: 0.2334553682907507 MAPE: 740.2031748515565 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: RandomForests Pearson Correlation: 0.5840605744664199 Spearman Correlation: 0.525279319987048 Coefficient of Determination: 0.2572436345592607 RMSE: 0.1637915170117365 NRMSE: 0.11039247095930263 MAPE: 177.47206102338652 Pearson Correlation: 0.21369056006372708 Spearman Correlation: 0.26409057469544506 Coefficient of Determination: 0.04563727282608365 RMSE: 0.20918817464636186 NRMSE: 0.14388170676348408 MAPE: 190.43827648305503 Protein: CDKN2A x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 3.0150378718327792e-15 NRMSE: 7.039218042194572e-16 MAPE: 2.2379577923110495e-12 Pearson Correlation: 0.2758072178530583 Spearman Correlation: 0.24292821606254444 Coefficient of Determination: -0.6171253411455397 RMSE: 0.8348987964295653 NRMSE: 0.2577564127163611 MAPE: 403.7863657789469 Predictor: ElasticNet Pearson Correlation: 0.527851199172719 Spearman Correlation: 0.41762022712371455 Coefficient of Determination: 0.2112983433851111 RMSE: 0.5928774600227052 NRMSE: 0.13841927998288786 MAPE: 234.69498455001028 Pearson Correlation: 0.342924953220937 Spearman Correlation: 0.2939862093043555 Coefficient of Determination: 0.09892936483121617 RMSE: 0.623220043022968 NRMSE: 0.19240531105028186 MAPE: 160.81462530788 Predictor: RandomForests Pearson Correlation: 0.6780455158212668 Spearman Correlation: 0.6609652273529759 Coefficient of Determination: 0.4484187322297982 RMSE: 0.4958077574699301 NRMSE: 0.11575638715678234 MAPE: 177.6365473822195 Pearson Correlation: 0.5980918194534491 Spearman Correlation: 0.5926981633187447 Coefficient of Determination: 0.34941109014454075 RMSE: 0.529560180522276 NRMSE: 0.16348991402620358 MAPE: 97.6477196185006 Protein: TP53 x_train_column_count: 1001 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.9492126600735497e-15 NRMSE: 4.684481278715573e-16 MAPE: 3.998658717330757e-12 Pearson Correlation: 0.2450186588585545 Spearman Correlation: 0.17782017232135067 Coefficient of Determination: -0.7616597411941362 RMSE: 0.5713234492506785 NRMSE: 0.21304604531123225 MAPE: 1156.506262633099 Predictor: ElasticNet Pearson Correlation: 0.5041834053878547 Spearman Correlation: 0.48651808054817036 Coefficient of Determination: 0.20338291519108287 RMSE: 0.4017410193159278 NRMSE: 0.09654915148183799 MAPE: 582.1853224142912 Pearson Correlation: 0.4207340219743935 Spearman Correlation: 0.46240726193593445 Coefficient of Determination: 0.14329720766091647 RMSE: 0.3984154082500403 NRMSE: 0.14856877873655802 MAPE: 291.61337665938436 Predictor: RandomForests Pearson Correlation: 0.6491535493646411 Spearman Correlation: 0.5937027524327151 Coefficient of Determination: 0.3697300023395774 RMSE: 0.35734251202225764 NRMSE: 0.0858789983230612 MAPE: 572.7841332127937 Pearson Correlation: 0.47974776336749136 Spearman Correlation: 0.41579820197259315 Coefficient of Determination: 0.21329241450136505 RMSE: 0.381792773182401 NRMSE: 0.14237021176288123 MAPE: 415.847666435099 Protein: CTNNB1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.634631522894839e-15 NRMSE: 7.14915720474988e-16 MAPE: 2.2009251826667167e-12 Pearson Correlation: 0.35337794410169754 Spearman Correlation: 0.29999625930497886 Coefficient of Determination: -0.9752699726070282 RMSE: 0.861494905836401 NRMSE: 0.28163552448148055 MAPE: 723.3833443297575 Predictor: ElasticNet Pearson Correlation: 0.5767741502122061 Spearman Correlation: 0.5642870980852291 Coefficient of Determination: 0.2435843288907461 RMSE: 0.6689876327403704 NRMSE: 0.1315868671794592 MAPE: 331.5740898822249 Pearson Correlation: 0.3088909157174094 Spearman Correlation: 0.2901307996359057 Coefficient of Determination: 0.08908074322890192 RMSE: 0.5850317342133032 NRMSE: 0.19125559325682537 MAPE: 2060.517451061554 Predictor: RandomForests Pearson Correlation: 0.649445475037723 Spearman Correlation: 0.6489446387500549 Coefficient of Determination: 0.3070112965770002 RMSE: 0.6403256630920453 NRMSE: 0.12594918628875792 MAPE: 323.9296759438181 Pearson Correlation: 0.12076033846183341 Spearman Correlation: 0.12890684422499035 Coefficient of Determination: -0.022634132905344995 RMSE: 0.6198685823657705 NRMSE: 0.2026442781280102 MAPE: 1651.9769845903309 Protein: CCNE1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.9999999999999996 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.6410963644555996e-15 NRMSE: 3.9604613375862146e-16 MAPE: 2.7221479895240726e-13 Pearson Correlation: 0.4985847605624617 Spearman Correlation: 0.40221698524919264 Coefficient of Determination: -0.38426297102911433 RMSE: 0.4293086456169615 NRMSE: 0.18700555195232893 MAPE: 159.75741482266727 Predictor: ElasticNet Pearson Correlation: 0.7175353630479223 Spearman Correlation: 0.6461806326368521 Coefficient of Determination: 0.44881412753577 RMSE: 0.3878567119996547 NRMSE: 0.0936015425826326 MAPE: 71.0634916171742 Pearson Correlation: 0.5867830932893267 Spearman Correlation: 0.5331263482088306 Coefficient of Determination: 0.33285186440202297 RMSE: 0.2980378845098859 NRMSE: 0.12982440410762985 MAPE: 66.34256772348787 Predictor: RandomForests Pearson Correlation: 0.8651379657420742 Spearman Correlation: 0.7277403675095334 Coefficient of Determination: 0.7441404865614004 RMSE: 0.26425490515230415 NRMSE: 0.06377269231660211 MAPE: 55.37684942093601 Pearson Correlation: 0.7811812854442801 Spearman Correlation: 0.6686136403606858 Coefficient of Determination: 0.5636703892061194 RMSE: 0.24102809988956264 NRMSE: 0.10499111377338617 MAPE: 79.53469437004436 Protein: CCND1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.608078433419904e-15 NRMSE: 9.667302505800725e-16 MAPE: 7.00075664153953e-12 Pearson Correlation: 0.23057113769777576 Spearman Correlation: 0.24199553610394148 Coefficient of Determination: -0.9672502090650839 RMSE: 0.2941780169395775 NRMSE: 0.27875452885787144 MAPE: 359.6510031662283 Predictor: ElasticNet Pearson Correlation: 0.22324045281592123 Spearman Correlation: 0.2597344851521026 Coefficient of Determination: 0.0003115901717327674 RMSE: 0.24461824369214077 NRMSE: 0.1470574140578692 MAPE: 620.5422396961181 Pearson Correlation: 0.07607581205909651 Spearman Correlation: 0.08772428583897555 Coefficient of Determination: -0.0009309097943495104 RMSE: 0.20983719222611147 NRMSE: 0.19883561750932074 MAPE: 467.64618390592904 Predictor: RandomForests Pearson Correlation: 0.5901486861181876 Spearman Correlation: 0.5755355442521715 Coefficient of Determination: 0.291495428204225 RMSE: 0.20593389971160278 NRMSE: 0.12380150515901144 MAPE: 481.3250606575038 Pearson Correlation: 0.38875287882567716 Spearman Correlation: 0.37896482499781803 Coefficient of Determination: 0.13619282222479479 RMSE: 0.19493455016823635 NRMSE: 0.18471430753246504 MAPE: 308.6996848975467 Protein: ERBB2 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 5.014518935756036e-15 NRMSE: 8.543058309208369e-16 MAPE: 6.278223354834831e-12 Pearson Correlation: 0.6762655090737314 Spearman Correlation: 0.4743132387106253 Coefficient of Determination: 0.24916632224066637 RMSE: 0.9241649326582838 NRMSE: 0.16670844445094954 MAPE: 488.6400231287835 Predictor: ElasticNet Pearson Correlation: 0.725100666101608 Spearman Correlation: 0.6166859987605476 Coefficient of Determination: 0.3649692038117772 RMSE: 0.7819346032720025 NRMSE: 0.13321542894389876 MAPE: 896.1921792214989 Pearson Correlation: 0.7068858301263752 Spearman Correlation: 0.6026741015155765 Coefficient of Determination: 0.3288275095843768 RMSE: 0.8737650856533676 NRMSE: 0.15761690700147335 MAPE: 187.0502614462394 Predictor: RandomForests Pearson Correlation: 0.8468789174399237 Spearman Correlation: 0.6777004711246402 Coefficient of Determination: 0.7072153749245436 RMSE: 0.5309421113116832 NRMSE: 0.09045472704085102 MAPE: 538.4603142155265 Pearson Correlation: 0.8599483162350716 Spearman Correlation: 0.7046888336952579 Coefficient of Determination: 0.7294848969235856 RMSE: 0.5547194219156006 NRMSE: 0.10006483547074116 MAPE: 195.88571963922672 Protein: ERBB3 x_train_column_count: 1001 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999884408153 Coefficient of Determination: 1.0 RMSE: 1.9217557838631566e-15 NRMSE: 6.968260954516191e-16 MAPE: 1.7509705825569505e-12 Pearson Correlation: 0.16676855982853395 Spearman Correlation: 0.18448858464569387 Coefficient of Determination: -1.0570461362649115 RMSE: 0.7095500304040023 NRMSE: 0.19727532644860007 MAPE: 322.77266840290304 Predictor: ElasticNet Pearson Correlation: 0.47073471267047684 Spearman Correlation: 0.4676041885247682 Coefficient of Determination: 0.13902775023596858 RMSE: 0.4184806130786162 NRMSE: 0.15174051462854168 MAPE: 222.65076843283174 Pearson Correlation: 0.30536569359227944 Spearman Correlation: 0.35651067968428535 Coefficient of Determination: 0.04981724817215549 RMSE: 0.48224149627564294 NRMSE: 0.13407701293546756 MAPE: 142.6799293713613 Predictor: RandomForests Pearson Correlation: 0.575894214957389 Spearman Correlation: 0.6085492123667124 Coefficient of Determination: 0.3094723457469538 RMSE: 0.3747755967052598 NRMSE: 0.1358931337246715 MAPE: 231.6725738912509 Pearson Correlation: 0.36654590061835496 Spearman Correlation: 0.3417124901806756 Coefficient of Determination: 0.11236598536510056 RMSE: 0.46609878943464417 NRMSE: 0.1295888759114879 MAPE: 157.30369429560906 Fold: 4 Protein: RB1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.3180701051161792e-15 NRMSE: 4.820326598581697e-16 MAPE: 7.322361651220028e-12 Pearson Correlation: 0.10848596877371487 Spearman Correlation: 0.15596453821119965 Coefficient of Determination: -4.520220262034599 RMSE: 0.3873935359592192 NRMSE: 0.3711661518024175 MAPE: 586.3124111694416 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: RandomForests Pearson Correlation: 0.6513585157706546 Spearman Correlation: 0.47123885191330606 Coefficient of Determination: 0.18982765672383473 RMSE: 0.22638383454949274 NRMSE: 0.08279104540282795 MAPE: 160.12881256536758 Pearson Correlation: 0.2467079453946585 Spearman Correlation: 0.19536652576715424 Coefficient of Determination: -0.040597924606663005 RMSE: 0.1681959925652817 NRMSE: 0.16115049301084744 MAPE: 99.13247379775028 Protein: CDH1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 6.183425125811198e-15 NRMSE: 9.845904789355748e-16 MAPE: 6.127130153029537e-12 Pearson Correlation: 0.3397445819101635 Spearman Correlation: 0.32440554121622467 Coefficient of Determination: -0.615543572563207 RMSE: 1.4826013595585972 NRMSE: 0.2689672652586258 MAPE: 641.0298925259827 Predictor: ElasticNet Pearson Correlation: 0.7062213639476042 Spearman Correlation: 0.6871697179894308 Coefficient of Determination: 0.4229393689531029 RMSE: 0.8500514191905211 NRMSE: 0.13535419559735692 MAPE: 379.70665114245213 Pearson Correlation: 0.6526972692323867 Spearman Correlation: 0.5019838152595419 Coefficient of Determination: 0.31994702147353393 RMSE: 0.9619144076452064 NRMSE: 0.1745064416467484 MAPE: 263.43103862947197 Predictor: RandomForests Pearson Correlation: 0.7498840722860336 Spearman Correlation: 0.7190563691730592 Coefficient of Determination: 0.5573582605930929 RMSE: 0.7444930630799759 NRMSE: 0.11854607545619181 MAPE: 228.7103605182188 Pearson Correlation: 0.7708864668842155 Spearman Correlation: 0.5015748326038979 Coefficient of Determination: 0.5262106487070924 RMSE: 0.8028930597539321 NRMSE: 0.14565746158592432 MAPE: 156.3591982143094 Protein: CDH2 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999036734615 Coefficient of Determination: 1.0 RMSE: 1.769596461396726e-15 NRMSE: 6.412046022888348e-16 MAPE: 1.7853754675934264e-11 Pearson Correlation: 0.06507735363010896 Spearman Correlation: 0.09660220202246912 Coefficient of Determination: -2.0828130303103953 RMSE: 0.5851482988804699 NRMSE: 0.3018593428255488 MAPE: 624.0837466919816 Predictor: ElasticNet Pearson Correlation: 0.19067972901090766 Spearman Correlation: 0.1792741382709351 Coefficient of Determination: 0.002321232519643557 RMSE: 0.3789229838993335 NRMSE: 0.1373008855349422 MAPE: 703.4492518296332 Pearson Correlation: 0.08082906238079156 Spearman Correlation: 0.03403783089564708 Coefficient of Determination: -0.0555159561876859 RMSE: 0.34239290384739346 NRMSE: 0.17662957773481977 MAPE: 153.87982200272003 Predictor: RandomForests Pearson Correlation: 0.5672657525313983 Spearman Correlation: 0.5363513543791314 Coefficient of Determination: 0.16862093493596597 RMSE: 0.3459036349949346 NRMSE: 0.1253364863377544 MAPE: 408.5439821174403 Pearson Correlation: 0.23016804734030763 Spearman Correlation: 0.19316200950136536 Coefficient of Determination: -0.01024458289313257 RMSE: 0.3349697730419787 NRMSE: 0.17280022132907158 MAPE: 134.86258635917213 Protein: CDH3 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 1.0829793212814827e-15 NRMSE: 7.718255635798869e-16 MAPE: 4.033867684594793e-12 Pearson Correlation: 0.2004399773361389 Spearman Correlation: 0.170787665681617 Coefficient of Determination: -1.273779090441435 RMSE: 0.3133370305374378 NRMSE: 0.2788837340347809 MAPE: 1986.9726367593798 Predictor: ElasticNet Pearson Correlation: 0.3811535579862714 Spearman Correlation: 0.38097877625842175 Coefficient of Determination: 0.027060527623545494 RMSE: 0.20310495087324118 NRMSE: 0.14475031064130534 MAPE: 169.32261460853667 Pearson Correlation: 0.2966646247331967 Spearman Correlation: 0.284205538722428 Coefficient of Determination: -0.07267180242735116 RMSE: 0.21521424871110567 NRMSE: 0.19155014392999414 MAPE: 173.18170813189232 Predictor: RandomForests Pearson Correlation: 0.604530252515863 Spearman Correlation: 0.5832424652997139 Coefficient of Determination: 0.29280708542403955 RMSE: 0.17315958993592326 NRMSE: 0.12340863344778372 MAPE: 344.80544355483954 Pearson Correlation: 0.4508840304439128 Spearman Correlation: 0.3717777029638774 Coefficient of Determination: 0.11496748960308989 RMSE: 0.1954866936314326 NRMSE: 0.17399175252454968 MAPE: 197.68759786691996 Protein: PTEN x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.835639578836568e-15 NRMSE: 5.485220479024621e-16 MAPE: 4.618515544239399e-12 Pearson Correlation: 0.14520485758631613 Spearman Correlation: 0.23591565979625684 Coefficient of Determination: -0.5791889509251913 RMSE: 0.9369281169717224 NRMSE: 0.14649802470044912 MAPE: 416.92806486189085 Predictor: ElasticNet Pearson Correlation: 0.42432527199532155 Spearman Correlation: 0.3963231545598919 Coefficient of Determination: 0.0993013434480916 RMSE: 0.5331593496417344 NRMSE: 0.10313357893100712 MAPE: 256.1546151133786 Pearson Correlation: 0.28434430802946237 Spearman Correlation: 0.3017618673549546 Coefficient of Determination: 0.03983991165024725 RMSE: 0.7305686779527829 NRMSE: 0.1142316750766606 MAPE: 626.0863094848172 Predictor: RandomForests Pearson Correlation: 0.6086871077834123 Spearman Correlation: 0.5381202801553915 Coefficient of Determination: 0.28272923850121867 RMSE: 0.4757829074971331 NRMSE: 0.09203476236016966 MAPE: 174.63682395784065 Pearson Correlation: 0.4338967221492198 Spearman Correlation: 0.4648561702764374 Coefficient of Determination: 0.1428193910584823 RMSE: 0.6902801627213809 NRMSE: 0.10793216522889233 MAPE: 391.92352592322953 Protein: BRCA2 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999229387699 Coefficient of Determination: 1.0 RMSE: 9.091342611165293e-16 NRMSE: 5.85688040661317e-16 MAPE: 1.7908708485914398e-12 Pearson Correlation: 0.1308747327387528 Spearman Correlation: 0.09477674285215527 Coefficient of Determination: -1.5046402838842594 RMSE: 0.32935190176442686 NRMSE: 0.3199734790922335 MAPE: 884.8913581243115 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: RandomForests Pearson Correlation: 0.5501532464012222 Spearman Correlation: 0.475704076697197 Coefficient of Determination: 0.22493122720463277 RMSE: 0.16885445956293 NRMSE: 0.10878045389784506 MAPE: 149.5694148315577 Pearson Correlation: 0.38057183011229 Spearman Correlation: 0.40472574471003386 Coefficient of Determination: 0.12241717970879318 RMSE: 0.19495373107651473 NRMSE: 0.18940234824932697 MAPE: 241.97161117109496 Protein: CDKN2A x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 3.008357038501782e-15 NRMSE: 6.800852353344143e-16 MAPE: 6.028130667091777e-12 Pearson Correlation: 0.35594371426164345 Spearman Correlation: 0.2808638511702141 Coefficient of Determination: -0.7871585581377631 RMSE: 0.8431161702331676 NRMSE: 0.2540271678918854 MAPE: 678.4454937803534 Predictor: ElasticNet Pearson Correlation: 0.5095750547047132 Spearman Correlation: 0.4258542964437958 Coefficient of Determination: 0.1857270754653494 RMSE: 0.6081572782578945 NRMSE: 0.1374832775534971 MAPE: 224.456879411418 Pearson Correlation: 0.48374303671306484 Spearman Correlation: 0.30409107345478126 Coefficient of Determination: 0.1677047139165042 RMSE: 0.5753665286218275 NRMSE: 0.1733553867495714 MAPE: 132.9916822945581 Predictor: RandomForests Pearson Correlation: 0.6854640333441024 Spearman Correlation: 0.6421045503413813 Coefficient of Determination: 0.4596129112260616 RMSE: 0.4954312462339378 NRMSE: 0.11199982959962422 MAPE: 190.16593422191784 Pearson Correlation: 0.5883434240942633 Spearman Correlation: 0.5507756340801974 Coefficient of Determination: 0.3249843259689116 RMSE: 0.5181587124326181 NRMSE: 0.15611892510774877 MAPE: 121.02110618088425 Protein: TP53 x_train_column_count: 1001 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.6408257881980406e-15 NRMSE: 3.9433448406585934e-16 MAPE: 7.77026299626469e-12 Pearson Correlation: 0.36854420773416885 Spearman Correlation: 0.32326338233643814 Coefficient of Determination: -1.1006498049639646 RMSE: 0.6258523545242678 NRMSE: 0.19860762710214133 MAPE: 660.3006668487272 Predictor: ElasticNet Pearson Correlation: 0.5006659671684368 Spearman Correlation: 0.5051125790376082 Coefficient of Determination: 0.19764522709242416 RMSE: 0.40319090032573485 NRMSE: 0.09689759680983775 MAPE: 636.0158666339481 Pearson Correlation: 0.4512113360972279 Spearman Correlation: 0.4104365391089665 Coefficient of Determination: 0.17350042261298115 RMSE: 0.3925693413442478 NRMSE: 0.12457772954564858 MAPE: 192.87969015069407 Predictor: RandomForests Pearson Correlation: 0.6433824266604506 Spearman Correlation: 0.6041917396723134 Coefficient of Determination: 0.3583414686990819 RMSE: 0.36056161317796764 NRMSE: 0.08665263474596675 MAPE: 941.2731495586623 Pearson Correlation: 0.5358288936353018 Spearman Correlation: 0.42058629159964595 Coefficient of Determination: 0.25469168301376355 RMSE: 0.3727889623838569 NRMSE: 0.11830063543534428 MAPE: 241.8061378960294 Protein: CTNNB1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 3.170632223204911e-15 NRMSE: 7.657792056817967e-16 MAPE: 2.3739104292957668e-12 Pearson Correlation: 0.27877115714971357 Spearman Correlation: 0.26473896183244183 Coefficient of Determination: -0.45414705197120875 RMSE: 0.9676637079004886 NRMSE: 0.2034445605711228 MAPE: 453.59409291970326 Predictor: ElasticNet Pearson Correlation: 0.5539444958803382 Spearman Correlation: 0.5334057452037821 Coefficient of Determination: 0.21109800456298766 RMSE: 0.6318904151391697 NRMSE: 0.1526157895708554 MAPE: 689.8225918526064 Pearson Correlation: 0.3591028308710503 Spearman Correlation: 0.3032032818364319 Coefficient of Determination: 0.021561040621114635 RMSE: 0.7937562503910628 NRMSE: 0.1668817278595288 MAPE: 642.6871352304598 Predictor: RandomForests Pearson Correlation: 0.6364686755341936 Spearman Correlation: 0.6183162409916635 Coefficient of Determination: 0.2821484734033174 RMSE: 0.6027643447990039 NRMSE: 0.14558118655178337 MAPE: 600.2077177213108 Pearson Correlation: 0.29470436600998184 Spearman Correlation: 0.2468634272247784 Coefficient of Determination: -0.016580480181616508 RMSE: 0.8090794541491168 NRMSE: 0.17010332481480042 MAPE: 683.9786789139522 Protein: CCNE1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.4212242629929094e-15 NRMSE: 5.843145650005815e-16 MAPE: 4.578138982677655e-13 Pearson Correlation: 0.5553762410491112 Spearman Correlation: 0.3440067831269717 Coefficient of Determination: -0.33643411100879184 RMSE: 0.5226377697252647 NRMSE: 0.21326930944473382 MAPE: 139.63789403115817 Predictor: ElasticNet Pearson Correlation: 0.6998333443458074 Spearman Correlation: 0.6425222925607132 Coefficient of Determination: 0.4185990864167489 RMSE: 0.3849115474169429 NRMSE: 0.09289078538913119 MAPE: 67.51975419672902 Pearson Correlation: 0.6708763930950158 Spearman Correlation: 0.5523485330241026 Coefficient of Determination: 0.40485691650908795 RMSE: 0.3487688676254989 NRMSE: 0.1423197860219942 MAPE: 91.17552599600673 Predictor: RandomForests Pearson Correlation: 0.8596995610462344 Spearman Correlation: 0.717278312787824 Coefficient of Determination: 0.73381598939782 RMSE: 0.2604438264692595 NRMSE: 0.06285296388958166 MAPE: 55.46250234474248 Pearson Correlation: 0.8406534892651517 Spearman Correlation: 0.7083561133217436 Coefficient of Determination: 0.6988338410657753 RMSE: 0.2481019061313134 NRMSE: 0.10124129034983817 MAPE: 73.97227836105776 Protein: CCND1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.3871214621419172e-15 NRMSE: 8.862150126767592e-16 MAPE: 5.13058341963009e-12 Pearson Correlation: 0.30271127116948887 Spearman Correlation: 0.2749236274766519 Coefficient of Determination: -1.3614989265267599 RMSE: 0.3519110219449533 NRMSE: 0.22194186550514208 MAPE: 738.1065511796227 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: RandomForests Pearson Correlation: 0.5873720696851611 Spearman Correlation: 0.5492611774130923 Coefficient of Determination: 0.27066070382940466 RMSE: 0.2052255883542121 NRMSE: 0.1311161295883084 MAPE: 469.87146383545024 Pearson Correlation: 0.49079245030496443 Spearman Correlation: 0.42470604371625587 Coefficient of Determination: 0.19831137755079808 RMSE: 0.20504153908211256 NRMSE: 0.1293147950820589 MAPE: 501.08622461175815 Protein: ERBB2 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.686173039673259e-15 NRMSE: 6.2800024527203425e-16 MAPE: 3.860562959810267e-12 Pearson Correlation: 0.5228885302854054 Spearman Correlation: 0.359279241984895 Coefficient of Determination: 0.08415910971571672 RMSE: 0.9920850096002751 NRMSE: 0.17864461583899505 MAPE: 416.32682189866443 Predictor: ElasticNet Pearson Correlation: 0.7305848816504806 Spearman Correlation: 0.6137321262256785 Coefficient of Determination: 0.37393156392161264 RMSE: 0.7760727219599813 NRMSE: 0.13221676098607787 MAPE: 794.2485268891298 Pearson Correlation: 0.6445598082924786 Spearman Correlation: 0.5116179897733247 Coefficient of Determination: 0.25142879982768707 RMSE: 0.8969235553360188 NRMSE: 0.1615089054157847 MAPE: 289.0874155363125 Predictor: RandomForests Pearson Correlation: 0.8540539706197957 Spearman Correlation: 0.6884433085607845 Coefficient of Determination: 0.7249195586062867 RMSE: 0.5144241759760472 NRMSE: 0.08764062490008812 MAPE: 385.4207780113262 Pearson Correlation: 0.7850149329475594 Spearman Correlation: 0.6857792898210383 Coefficient of Determination: 0.5687953220324005 RMSE: 0.6807389561711443 NRMSE: 0.12258057337327481 MAPE: 204.93537372418635 Protein: ERBB3 x_train_column_count: 1001 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999036734615 Coefficient of Determination: 1.0 RMSE: 2.3982835285007112e-15 NRMSE: 6.557721990109103e-16 MAPE: 2.056188881418542e-12 Pearson Correlation: 0.04393377956320487 Spearman Correlation: 0.06973902417735882 Coefficient of Determination: -2.684511170167385 RMSE: 0.7382059780586353 NRMSE: 0.3633493520397679 MAPE: 380.8895589089763 Predictor: ElasticNet Pearson Correlation: 0.4674544120809331 Spearman Correlation: 0.4748238539120918 Coefficient of Determination: 0.13855138136669898 RMSE: 0.44338840735368473 NRMSE: 0.12123745480920727 MAPE: 224.03534560034365 Pearson Correlation: 0.29464124618239246 Spearman Correlation: 0.2860110475192958 Coefficient of Determination: 0.07688413103806047 RMSE: 0.3695010930913496 NRMSE: 0.18187062519570088 MAPE: 204.26242658947277 Predictor: RandomForests Pearson Correlation: 0.5891577084424363 Spearman Correlation: 0.6026628822401662 Coefficient of Determination: 0.31772917498313114 RMSE: 0.3945917899239238 NRMSE: 0.10789480172589441 MAPE: 231.50365836206302 Pearson Correlation: 0.4099533267455605 Spearman Correlation: 0.3161111734560282 Coefficient of Determination: 0.15780273968739134 RMSE: 0.3529348394638589 NRMSE: 0.17371661710014857 MAPE: 229.7583962658147 Fold: 5 Protein: RB1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.1230744753901261e-15 NRMSE: 5.548156461420521e-16 MAPE: 4.570804108862415e-12 Pearson Correlation: -0.08621770455561417 Spearman Correlation: -0.06328009077419919 Coefficient of Determination: -2.26700516559586 RMSE: 0.43446450026659583 NRMSE: 0.21905920389377198 MAPE: 2658.1296439164284 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: RandomForests Pearson Correlation: 0.6333407424306305 Spearman Correlation: 0.48634400860604393 Coefficient of Determination: 0.22200297329251872 RMSE: 0.20631394926820734 NRMSE: 0.10192218733454564 MAPE: 146.50491796857625 Pearson Correlation: -0.007772519524844009 Spearman Correlation: 0.06689609596129628 Coefficient of Determination: -0.11637859794725891 RMSE: 0.2539715893840866 NRMSE: 0.12805376307609795 MAPE: 391.17963486836607 Protein: CDH1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.045003314679966e-15 NRMSE: 6.440882957039529e-16 MAPE: 1.9004367962819384e-12 Pearson Correlation: 0.3253409150859659 Spearman Correlation: 0.288150725071385 Coefficient of Determination: -0.48982290969932607 RMSE: 1.4180096169918956 NRMSE: 0.2788557977211649 MAPE: 1535.8463475448937 Predictor: ElasticNet Pearson Correlation: 0.7298844375638156 Spearman Correlation: 0.679593212277595 Coefficient of Determination: 0.45232012299467717 RMSE: 0.8333546385530599 NRMSE: 0.13269555723592558 MAPE: 207.4299529928186 Pearson Correlation: 0.5449370971600367 Spearman Correlation: 0.564947193855285 Coefficient of Determination: 0.27029229294367074 RMSE: 0.9923990016505002 NRMSE: 0.19515820763613306 MAPE: 849.0923849175651 Predictor: RandomForests Pearson Correlation: 0.7881028567843386 Spearman Correlation: 0.7009168040271099 Coefficient of Determination: 0.6159632038057252 RMSE: 0.6978352188395326 NRMSE: 0.111116719027982 MAPE: 139.7997880316965 Pearson Correlation: 0.6374978255637292 Spearman Correlation: 0.5625980373820124 Coefficient of Determination: 0.3949171557637401 RMSE: 0.903689574271576 NRMSE: 0.17771323558466423 MAPE: 354.5143260245721 Protein: CDH2 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.1724046984697013e-15 NRMSE: 1.5580790228720107e-15 MAPE: 2.2971393495389618e-11 Pearson Correlation: 0.1467321840565915 Spearman Correlation: 0.09062219057874421 Coefficient of Determination: -1.0560287874256091 RMSE: 0.5980617287831683 NRMSE: 0.22364554298867614 MAPE: 10905.792182826175 Predictor: ElasticNet Pearson Correlation: 0.2378248310009852 Spearman Correlation: 0.25339223534129746 Coefficient of Determination: 0.0012218864825498388 RMSE: 0.3589169276514036 NRMSE: 0.17627666993340382 MAPE: 198.50674508933076 Pearson Correlation: 0.031842808846932955 Spearman Correlation: -0.04673879566930361 Coefficient of Determination: -0.01545946820235966 RMSE: 0.42030321592535314 NRMSE: 0.157172640250305 MAPE: 592.0231523207885 Predictor: RandomForests Pearson Correlation: 0.690527495726691 Spearman Correlation: 0.6113240783823681 Coefficient of Determination: 0.18389174281739784 RMSE: 0.32443919787365677 NRMSE: 0.1593434496702798 MAPE: 341.27840885905437 Pearson Correlation: 0.16133870996912367 Spearman Correlation: 0.13155292653650114 Coefficient of Determination: 0.004424892819437587 RMSE: 0.4161677580919581 NRMSE: 0.1556261833075774 MAPE: 1035.434822133326 Protein: CDH3 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.3297618849006128e-15 NRMSE: 9.32930547300761e-16 MAPE: 5.781119871937845e-12 Pearson Correlation: 0.30969895523775437 Spearman Correlation: 0.2819062581827704 Coefficient of Determination: -0.8244534834292268 RMSE: 0.3017409764529534 NRMSE: 0.2722335788422427 MAPE: 330.7134064440158 Predictor: ElasticNet Pearson Correlation: 0.4219369603937694 Spearman Correlation: 0.44336861832126473 Coefficient of Determination: 0.03849602113083872 RMSE: 0.19980717357644898 NRMSE: 0.14018014647278512 MAPE: 142.62062173312822 Pearson Correlation: 0.38808234343387055 Spearman Correlation: 0.3715682240426939 Coefficient of Determination: 0.022417828448712762 RMSE: 0.2208739664114036 NRMSE: 0.19927459324913038 MAPE: 117.46965173253487 Predictor: RandomForests Pearson Correlation: 0.6063903922707888 Spearman Correlation: 0.6066380118341773 Coefficient of Determination: 0.29634223665844706 RMSE: 0.1709292060240016 NRMSE: 0.11992002443172364 MAPE: 377.1330688017926 Pearson Correlation: 0.4672004452249041 Spearman Correlation: 0.4692652028080151 Coefficient of Determination: 0.1808122794568171 RMSE: 0.20218997136686215 NRMSE: 0.18241771521473682 MAPE: 237.03051847154032 Protein: PTEN x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.986936582135181e-15 NRMSE: 4.670372265085108e-16 MAPE: 4.053719267502229e-12 Pearson Correlation: 0.2539332330094221 Spearman Correlation: 0.2604895322884325 Coefficient of Determination: -0.5666384602271772 RMSE: 0.9033245796841706 NRMSE: 0.17473780944060868 MAPE: 1032.2636521931029 Predictor: ElasticNet Pearson Correlation: 0.44243845462935866 Spearman Correlation: 0.42531250928346964 Coefficient of Determination: 0.08033221004000868 RMSE: 0.545693525771713 NRMSE: 0.08532460726631429 MAPE: 337.36476208957964 Pearson Correlation: 0.41125858450660263 Spearman Correlation: 0.43556902205763165 Coefficient of Determination: 0.05614477055538103 RMSE: 0.7011519219203526 NRMSE: 0.13562982086048295 MAPE: 426.8825740148499 Predictor: RandomForests Pearson Correlation: 0.5845403021519265 Spearman Correlation: 0.5459929376033683 Coefficient of Determination: 0.290837418944065 RMSE: 0.4791883148838677 NRMSE: 0.07492585644341611 MAPE: 255.07394420386572 Pearson Correlation: 0.3928679749143152 Spearman Correlation: 0.426057681517226 Coefficient of Determination: 0.1393990276027477 RMSE: 0.6695150621901923 NRMSE: 0.12951003214759213 MAPE: 389.0728580223109 Protein: BRCA2 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999903673458 Coefficient of Determination: 1.0 RMSE: 1.1020878543079981e-15 NRMSE: 7.099937859932345e-16 MAPE: 3.91313772666273e-12 Pearson Correlation: -0.008906618400049192 Spearman Correlation: 0.020651130313345555 Coefficient of Determination: -3.0448615452108223 RMSE: 0.33403265178614683 NRMSE: 0.43684385246341045 MAPE: 843.0381669762252 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: RandomForests Pearson Correlation: 0.5757575644496171 Spearman Correlation: 0.5315647445770695 Coefficient of Determination: 0.23699665301035955 RMSE: 0.17510909931478513 NRMSE: 0.11280985621825423 MAPE: 172.18720438908298 Pearson Correlation: 0.28842033361320957 Spearman Correlation: 0.2664646691355254 Coefficient of Determination: 0.0044206990289528125 RMSE: 0.1657200365532596 NRMSE: 0.21672665474826336 MAPE: 159.01489492695183 Protein: CDKN2A x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.656236316010547e-15 NRMSE: 9.310270469329905e-16 MAPE: 3.061608114252647e-12 Pearson Correlation: 0.06837040470090913 Spearman Correlation: 0.05339966832504146 Coefficient of Determination: -1.428532171160437 RMSE: 0.944296428041185 NRMSE: 0.23761264891200146 MAPE: 553.048386352738 Predictor: ElasticNet Pearson Correlation: 0.5575526276896804 Spearman Correlation: 0.4482074768732514 Coefficient of Determination: 0.22914034296274166 RMSE: 0.596756172313131 NRMSE: 0.15195848649464772 MAPE: 214.6472554043505 Pearson Correlation: 0.29427218619978884 Spearman Correlation: 0.23660893527350718 Coefficient of Determination: 0.08642364243653711 RMSE: 0.5791737131071991 NRMSE: 0.14573707584288245 MAPE: 256.59874380723096 Predictor: RandomForests Pearson Correlation: 0.7081301701927131 Spearman Correlation: 0.6600983319938359 Coefficient of Determination: 0.49638984221345106 RMSE: 0.48234357900783437 NRMSE: 0.12282436887470001 MAPE: 176.32000429854662 Pearson Correlation: 0.37536899029370296 Spearman Correlation: 0.34014107604520777 Coefficient of Determination: -0.05931224871809837 RMSE: 0.6236607510718699 NRMSE: 0.1569313180523565 MAPE: 480.92108657232 Protein: TP53 x_train_column_count: 1001 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.6434013121754137e-15 NRMSE: 4.1796620264386526e-16 MAPE: 7.720763723287795e-12 Pearson Correlation: 0.24313954701855237 Spearman Correlation: 0.14658287509819326 Coefficient of Determination: -0.5312488894848961 RMSE: 0.6535468354564562 NRMSE: 0.17504937336452558 MAPE: 392.59663605820566 Predictor: ElasticNet Pearson Correlation: 0.493363668131485 Spearman Correlation: 0.48738155159620955 Coefficient of Determination: 0.18960746035593656 RMSE: 0.38150604948313155 NRMSE: 0.09702842124243535 MAPE: 656.8446636117651 Pearson Correlation: 0.46652205540742325 Spearman Correlation: 0.43634708662202776 Coefficient of Determination: 0.14974091181099058 RMSE: 0.4870005638788619 NRMSE: 0.13044075636235755 MAPE: 157.5658988123128 Predictor: RandomForests Pearson Correlation: 0.6530727746641888 Spearman Correlation: 0.5959312206892813 Coefficient of Determination: 0.3758632534461287 RMSE: 0.33480627429801607 NRMSE: 0.08515126892800327 MAPE: 742.679459909424 Pearson Correlation: 0.49415112658010396 Spearman Correlation: 0.3946662610088742 Coefficient of Determination: 0.21459470396151326 RMSE: 0.4680591455079002 NRMSE: 0.12536738864548017 MAPE: 148.29271555874683 Protein: CTNNB1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 4.24136406706665e-15 NRMSE: 8.34257290925777e-16 MAPE: 4.725450644623151e-12 Pearson Correlation: 0.27289628233397645 Spearman Correlation: 0.24621504008778167 Coefficient of Determination: -0.816516397468668 RMSE: 0.9133349122296313 NRMSE: 0.2925114774994896 MAPE: 369.9727022153624 Predictor: ElasticNet Pearson Correlation: 0.552633124867596 Spearman Correlation: 0.5338104707911452 Coefficient of Determination: 0.2067075158017928 RMSE: 0.6733291743860405 NRMSE: 0.1324408289508341 MAPE: 772.0451094766562 Pearson Correlation: 0.5417659348493354 Spearman Correlation: 0.5141435678749112 Coefficient of Determination: 0.20933749702109206 RMSE: 0.6025678678987604 NRMSE: 0.1929828970432138 MAPE: 256.22965699723557 Predictor: RandomForests Pearson Correlation: 0.625379350517765 Spearman Correlation: 0.6062243705181078 Coefficient of Determination: 0.2696173323201375 RMSE: 0.6460795454152725 NRMSE: 0.12708094913754375 MAPE: 648.7809742404891 Pearson Correlation: 0.47727479848324084 Spearman Correlation: 0.4434294691953765 Coefficient of Determination: 0.19114014664495338 RMSE: 0.6094625687294837 NRMSE: 0.19519104555468203 MAPE: 254.0095616234491 Protein: CCNE1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 2.191290605745919e-15 NRMSE: 7.805131276031768e-16 MAPE: 4.283137212947823e-13 Pearson Correlation: 0.5033349571981441 Spearman Correlation: 0.45390341525455435 Coefficient of Determination: 0.17609362323963718 RMSE: 0.5882722219681601 NRMSE: 0.14196786011732512 MAPE: 103.87840232806198 Predictor: ElasticNet Pearson Correlation: 0.7167042005047509 Spearman Correlation: 0.6243352890959752 Coefficient of Determination: 0.4359539420992309 RMSE: 0.33705707397813234 NRMSE: 0.12005594798864909 MAPE: 70.43340325151478 Pearson Correlation: 0.6339488600354641 Spearman Correlation: 0.6668736517911695 Coefficient of Determination: 0.27161210439412287 RMSE: 0.5531217924318261 NRMSE: 0.13348499950088716 MAPE: 101.08647121508479 Predictor: RandomForests Pearson Correlation: 0.8655154749419783 Spearman Correlation: 0.7126567740717785 Coefficient of Determination: 0.7455636016994495 RMSE: 0.22637881476707994 NRMSE: 0.08063359386182722 MAPE: 53.95610914590412 Pearson Correlation: 0.7789596681674333 Spearman Correlation: 0.7324237675410948 Coefficient of Determination: 0.5764126986177903 RMSE: 0.42180417645448526 NRMSE: 0.10179409138076725 MAPE: 76.43556510248712 Protein: CCND1 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.3013530842467271e-15 NRMSE: 8.196570368378559e-16 MAPE: 4.392196048578841e-12 Pearson Correlation: 0.14857222378210116 Spearman Correlation: 0.07683636953079216 Coefficient of Determination: -0.671284748048012 RMSE: 0.35675469705323093 NRMSE: 0.22792623212917731 MAPE: 411.83648269425754 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: RandomForests Pearson Correlation: 0.5747596807689636 Spearman Correlation: 0.5825200323549267 Coefficient of Determination: 0.29310210769948564 RMSE: 0.1913755329409766 NRMSE: 0.12053784952948743 MAPE: 506.4548560059175 Pearson Correlation: 0.35076099023903407 Spearman Correlation: 0.28679908727041487 Coefficient of Determination: 0.12005267706704348 RMSE: 0.25886468806190593 NRMSE: 0.16538549728594443 MAPE: 234.41966742704116 Protein: ERBB2 x_train_column_count: 1002 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 6.333643065358888e-15 NRMSE: 1.0790403368756304e-15 MAPE: 1.1972048129942277e-11 Pearson Correlation: 0.5427445020861035 Spearman Correlation: 0.39841643910771957 Coefficient of Determination: -0.15914291377437229 RMSE: 0.9342180195658318 NRMSE: 0.20670826851771917 MAPE: 1039.4701749011194 Predictor: ElasticNet Pearson Correlation: 0.7472668607895862 Spearman Correlation: 0.6109233599867583 Coefficient of Determination: 0.39589757162744166 RMSE: 0.7989410719243752 NRMSE: 0.13611276077557205 MAPE: 889.3778329930683 Pearson Correlation: 0.6475017869345734 Spearman Correlation: 0.5672714123617502 Coefficient of Determination: 0.33173939964538435 RMSE: 0.7093371012843677 NRMSE: 0.15695034877406078 MAPE: 482.58025409287086 Predictor: RandomForests Pearson Correlation: 0.8523584324776194 Spearman Correlation: 0.696331970212847 Coefficient of Determination: 0.7213266809860797 RMSE: 0.542634187673868 NRMSE: 0.09244666468028484 MAPE: 497.04289213534656 Pearson Correlation: 0.8063478655687486 Spearman Correlation: 0.6271360796413561 Coefficient of Determination: 0.627587135584042 RMSE: 0.5295318474894722 NRMSE: 0.11716602444727785 MAPE: 198.6097132720365 Protein: ERBB3 x_train_column_count: 1001 x_train columns: ['CCNT1', 'REST', 'CCDC160', 'THNSL2', 'GALNT6', 'HOXC11', 'FOXA1', 'COG7', 'DIXDC1', 'SPG11', 'RPL23AP64', 'IGIP', 'RALGPS2', 'GPR39', 'SPEN', 'APOOL', 'MKI67', 'ZNF106', 'MYB', 'ARHGAP35', 'UTRN', 'FBXO36', 'ZNF660', 'RMDN2', 'FER', 'NBEAL1', 'ZNF582', 'SIMC1', 'GIGYF2', 'NEK11', 'NBR1', 'NDST1', 'ZFP37', 'TRMT44', 'CASC2', 'NBPF7', 'TAS2R3', 'ZNF470', 'ZBED9', 'PEX7', 'FBXL16', 'ASAH2B', 'HDHD2', 'ZNF81', 'STH', 'CYB5D1', 'BMPR2', 'MARC2', 'TRIM56', 'ZNF445', 'LRCH1', 'TNK1', 'LMTK2', 'CRY2', 'MLH3', 'NICN1', 'RPL15', 'LOC100130691', 'ZNF583', 'ZMYND12', 'C2ORF74', 'SLC25A44', 'AFF4', 'EXO1', 'SBF2', 'LUZP1', 'SETD9', 'ZNF717', 'C16ORF71', 'ZNF510', 'PPP4R2', 'XPNPEP3', 'SLMAP', 'PCYOX1', 'ANKHD1-EIF4EBP3', 'PAFAH1B2', 'DDI2', 'WWC2-AS2', 'ZNF484', 'ANKRD36', 'MR1', 'BFAR', 'CNNM3', 'SH3D19', 'PLK1', 'AAK1', 'DDX6', 'PCSK5', 'RAB5B', 'NUDT16P1', 'CFAP97', 'CNIH3', 'MATR3', 'APC', 'LZTFL1', 'TCF12', 'ANKZF1', 'SON', 'RBM43', 'MAP9', 'HN1L', 'TTLL5', 'RALGPS1', 'TCTN2', 'HBP1', 'C1ORF21', 'USP32P2', 'HJURP', 'SMG1', 'ASXL2', 'C11ORF1', 'POLQ', 'PARP3', 'C9ORF64', 'CYB561D1', 'NBPF11', 'PRR14', 'DSE', 'SH2D4A', 'TSTD2', 'HOXC10', 'ZEB1', 'APLF', 'TRIP12', 'PLXNC1', 'TP53BP1', 'ZNF311', 'WBP1L', 'SLC25A20', 'SNX29', 'USP19', 'NCAPG', 'ZFP2', 'PSMD7', 'TPCN1', 'SGPP1', 'CEP120', 'RBM5', 'ANKHD1', 'ARMC9', 'CBX7', 'BOD1L1', 'ELK3', 'VPRBP', 'NR6A1', 'DHRS1', 'KIF4A', 'PLXDC2', 'NPRL3', 'OR10AD1', 'GATA3', 'NEK1', 'DNALI1', 'PGPEP1', 'FLJ37453', 'AARS', 'TMEM117', 'SMCHD1', 'ZBTB4', 'FAHD1', 'ADD1', 'CXXC5', 'ARHGEF12', 'ZBTB49', 'WDR6', 'LCA5L', 'LRP1', 'CDC14B', 'RAPGEF6', 'SDR39U1', 'POLK', 'ZNF429', 'TCF4', 'C2CD2', 'ZNF280D', 'COX20', 'HCFC1', 'ZKSCAN8', 'TMEM63C', 'CTIF', 'ZNF410', 'CLOCK', 'CD2BP2', 'SPEF2', 'IP6K1', 'DNAJC27', 'PSMD1', 'GGPS1', 'ZFYVE16', 'PPP2R2A', 'CDKL1', 'C16ORF62', 'MAATS1', 'KIAA0430', 'CUL5', 'ZFP3', 'FRG1B', 'ASMTL', 'FUS', 'GSTO2', 'ZNF699', 'IMMP2L', 'MAPKAPK3', 'ANKFY1', 'PIK3R3', 'DAGLA', 'SLC25A24', 'ZNF257', 'LIMA1', 'ACVR2A', 'CALCOCO1', 'HIST1H2AC', 'ADAMTSL5', 'RBM19', 'NME5', 'RNF103', 'ELL', 'ADAM20', 'KIF4B', 'LDLRAD3', 'ZNF740', 'CCDC9', 'NIP7', 'POLA2', 'FKBP1AP1', 'DDX28', 'PI4KA', 'SEC16B', 'ZNF236', 'DRAM2', 'RPS10P7', 'C6ORF62', 'CCDC64B', 'BDNF-AS', 'WDR81', 'PTPN23', 'TMF1', 'TJP3', 'VWA2', 'PREX2', 'CYP2U1', 'ZNF662', 'SLIT2', 'SERP2', 'HLA-DPA1', 'PPAPDC2', 'VPS39', 'PHKG2', 'CTC1', 'PCCB', 'KIAA1407', 'ATG2B', 'RSG1', 'BDH2', 'CEP162', 'CRTC2', 'PIP5K1P1', 'SHQ1', 'NRF1', 'RFX7', 'FAM160A2', 'PDPR', 'PCDH17', 'VPS11', 'AR', 'ZKSCAN2', 'KBTBD3', 'NHLRC3', 'ZBED8', 'IQCH', 'AASS', 'FAM47E', 'SLC30A9', 'CCDC144B', 'GUCY1B2', 'ASAP1', 'ELF1', 'TRIO', 'HIRIP3', 'ZNF619', 'OSBPL5', 'AP1S1', 'MARVELD2', 'IRF2BP2', 'SRFBP1', 'CCNH', 'SAP30L', 'BIRC6', 'TTBK2', 'RANBP10', 'CELSR1', 'GATA2', 'ZNF704', 'ALDH5A1', 'SPARCL1', 'PGAM4', 'MTERF4', 'ARHGEF10', 'POMT2', 'PSMB8', 'ZNF3', 'IQCE', 'NKTR', 'GAS8', 'PHIP', 'RNF10', 'TSPAN15', 'VPS37B', 'PP2D1', 'TMEM30B', 'RNF14', 'ERP44', 'RFPL3', 'CEP350', 'RGPD3', 'ARID1A', 'C17ORF97', 'MACF1', 'STK3', 'HNRNPH2', 'EP300', 'NEK9', 'LBX2-AS1', 'YAP1', 'NOL4L', 'GALNT3', 'MAP3K9', 'CHDH', 'ESCO1', 'IPP', 'FAM13B', 'DCTN4', 'PCNX', 'RPS6KL1', 'IPO9', 'CAB39L', 'ANKRD36B', 'ZNF721', 'GPATCH2L', 'WNT2', 'ARPC5', 'POC5', 'IMPACT', 'THSD1', 'HNRNPC', 'NCKIPSD', 'KBTBD4', 'VPS13D', 'FUT1', 'CARD10', 'PPP2R2C', 'MVP', 'NAPEPLD', 'ZNF441', 'TMEM143', 'ZNF12', 'AXL', 'TMED7', 'R3HDM4', 'PARN', 'PGAM1', 'EHD4', 'ZCWPW2', 'CFAP36', 'FAM120C', 'ATP13A1', 'ZNF608', 'ZNF148', 'CREBRF', 'ZER1', 'TTC8', 'TCTA', 'CCDC50', 'TAS2R4', 'FAM83E', 'PKD2', 'ERBB3', 'TMEM57', 'C6ORF136', 'LTBP2', 'C10ORF32', 'FAM193A', 'ERCC6L2', 'LRIG1', 'UHMK1', 'LOC391322', 'SLC44A1', 'ABCB7', 'SPDEF', 'NFATC2IP', 'MAGED2', 'PIGM', 'CATSPER2P1', 'ATXN2', 'ROCK1', 'CEP112', 'CDCA8', 'ATXN7', 'GPATCH11', 'DENND2D', 'MFAP3', 'LEPROT', 'OR2T8', 'COQ6', 'KIAA1598', 'TXNDC11', 'SKIV2L2', 'TSC22D1', 'BDH1', 'TRAF3IP1', 'FAM133B', 'ESR1', 'ROR2', 'TXNDC5', 'RSC1A1', 'PAQR3', 'KLHDC9', 'CCNDBP1', 'GOLIM4', 'MEIS3', 'HDAC7', 'EFCC1', 'XRCC3', 'ZNF502', 'CLK4', 'LRRC37A', 'KIF27', 'FAM73B', 'PIGB', 'PROX2', 'SLU7', 'WDR48', 'OR56B1', 'FAM151B', 'TMEM205', 'GIN1', 'FRMD4B', 'PHF23', 'CRK', 'COX19', 'C4ORF19', 'SCCPDH', 'SWT1', 'C1ORF64', 'RPS18', 'ARCN1', 'ARHGEF38', 'GSPT2', 'ZBTB34', 'MSANTD4', 'CFDP1', 'PTPN18', 'NIN', 'C5AR2', 'ZNF501', 'PEF1', 'KCTD12', 'KIAA0141', 'ZNF718', 'C4ORF32', 'C17ORF105', 'LCMT2', 'CCT3', 'BTD', 'RBBP6', 'HLA-DMA', 'VPS4A', 'KIAA1109', 'C9ORF156', 'NUP50', 'SUCLG2', 'CHIC1', 'ZRANB3', 'CCDC71', 'GATC', 'MRPL43', 'IFT46', 'NXF1', 'CDAN1', 'HHAT', 'MAML3', 'CSNK1G3', 'BTAF1', 'ENTHD2', 'FAM162A', 'NEURL4', 'PIAS3', 'RANGAP1', 'TUBGCP6', 'AZIN2', 'DHX8', 'LRRC37A2', 'ZYG11A', 'PDZD8', 'LYRM7', 'KIF2A', 'LMAN2L', 'SMYD4', 'CRTC1', 'PJA2', 'WHSC1', 'SLC30A5', 'CDCP2', 'ZNF862', 'METTL3', 'CEP63', 'SERPINC1', 'C16ORF46', 'CHD3', 'RNF111', 'LEPR', 'RAI2', 'GPR68', 'ETF1', 'WEE2-AS1', 'PRDM4', 'ITPK1', 'RPL10', 'MSH3', 'ARRDC3-AS1', 'HOXC13', 'CDC23', 'DHX29', 'RBL2', 'WASL', 'ZDHHC1', 'MACC1', 'PIGQ', 'TOM1L2', 'TRIM34', 'MARCH7', 'MST1R', 'ADCY6', 'TXNDC15', 'CWF19L2', 'PCAT18', 'WHAMMP2', 'C3ORF18', 'RABEP1', 'MKNK1', 'CALHM2', 'C14ORF93', 'GRK4', 'RAP1GAP2', 'DNAL1', 'NBPF14', 'OMA1', 'SCART1', 'FBXL17', 'SLC35E2', 'TADA2B', 'ZNF839', 'FBP1', 'DMTN', 'ZXDC', 'C1ORF220', 'GGT6', 'ZSCAN5A', 'PAXIP1-AS2', 'YLPM1', 'OCLM', 'MBD2', 'ZNF41', 'MINOS1', 'CCDC125', 'ZNF280B', 'SUV39H2', 'GLYR1', 'SEC14L1P1', 'NBPF10', 'SLX4IP', 'KLKP1', 'OR2A4', 'GINS1', 'TLE3', 'WDR78', 'CACTIN', 'STAT6', 'FLOT1', 'LOC100271832', 'NBPF4', 'PHF2', 'STAG3L1', 'FCHO1', 'CDKN2AIPNL', 'ABHD5', 'PCBP2', 'LIMD1', 'GFM2', 'STAT2', 'ZNF347', 'F2R', 'SLC6A6', 'MGST1', 'ZNF665', 'CAB39', 'KGFLP1', 'C7ORF69', 'AIDA', 'BECN1', 'ZFYVE9', 'MAPK9', 'MAEA', 'MXI1', 'SUSD1', 'LRRC32', 'TDRD5', 'DOPEY1', 'ELMOD3', 'ERGIC1', 'MYO6', 'SPR', 'LRRC56', 'QARS', 'SERF1A', 'XRCC2', 'TULP4', 'FAM114A1', 'TICAM2', 'NAP1L4', 'WDFY1', 'F2RL2', 'SYNPO', 'FNDC3A', 'ARHGAP31', 'ALG12', 'DGCR8', 'ARRDC1', 'HNRNPU', 'C9ORF41', 'ZPR1', 'FAM172A', 'AMMECR1', 'AREL1', 'RNF212', 'RBM15B', 'DHX15', 'C20ORF24', 'ALAD', 'HIVEP2', 'TAS2R42', 'TPM1', 'SELPLG', 'TMEM86B', 'CTDNEP1', 'ADPRM', 'REXO1', 'RCN1', 'DHX30', 'PBK', 'GINS2', 'ARHGEF40', 'TTLL1', 'CDK20', 'UBE2E2', 'MEGF9', 'PRCC', 'ANAPC4', 'ZNF415', 'PEX26', 'ATF7', 'LINC00271', 'SLC25A46', 'SIRT3', 'GIMAP2', 'NUP98', 'STAT5A', 'SLC8A1', 'RECQL4', 'LOC100190986', 'ZNF658', 'GABPA', 'GLI2', 'FUZ', 'UBLCP1', 'B3GNT9', 'BAIAP2L1', 'PAN2', 'ZDHHC2', 'DLST', 'MSL2', 'SLC25A5', 'TANGO6', 'MOAP1', 'DCTN5', 'GREM1', 'CAPN10', 'SETD2', 'THRAP3', 'SP1', 'PDCD4', 'OR2A1', 'RIF1', 'MAZ', 'VPS16', 'IARS', 'SLC48A1', 'C9ORF91', 'WNT7B', 'LCA5', 'TNRC6A', 'MCM3', 'THUMPD2', 'LTN1', 'BLNK', 'RGS1', 'ZNF687', 'PASK', 'C9ORF116', 'ZNF833P', 'RAB11FIP5', 'ARPC3', 'SH3PXD2B', 'CNN2', 'KLHL20', 'CAPN15', 'TSHZ3', 'NEK4', 'SCAP', 'EVC', 'NEBL', 'FLYWCH1', 'TNRC6B', 'COPB1', 'C9ORF152', 'C6ORF201', 'LRRC27', 'SPDYE7P', 'ASB6', 'KDM8', 'UBE2E3', 'EEF1G', 'QRICH1', 'C6ORF47', 'IL20RA', 'USP4', 'MEGF8', 'B2M', 'RBM14', 'LDB1', 'JMJD8', 'PRKAA1', 'NTPCR', 'KLF10', 'RAD50', 'ADAMTS16', 'USP40', 'LINC00663', 'CBL', 'ERAP1', 'MAP3K7CL', 'KIF18A', 'PSMD5-AS1', 'CCDC40', 'GOLGA2P7', 'ST5', 'INTU', 'HDAC5', 'LOC146880', 'BRF1', 'MAP10', 'KANSL1', 'HEMK1', 'DNAJC14', 'RAB40B', 'TRIM25', 'CDS1', 'MRFAP1L1', 'PANK1', 'DHRSX', 'KIAA0556', 'SLC27A1', 'RBM15', 'C6ORF120', 'HIST1H2BE', 'RGPD4', 'RASEF', 'MGA', 'KIAA0825', 'MAPKAPK5', 'RPL34-AS1', 'DCAF8', 'TGOLN2', 'ZFP36L2', 'RNF123', 'PCYOX1L', 'LOC401052', 'ITFG3', 'TTC9C', 'WDR88', 'XIST', 'ODF2', 'HNRNPDL', 'TXNL1', 'TOR1AIP2', 'GTF2F1', 'TTC30A', 'CTDSP1', 'RNF2', 'ADCY7', 'HNRNPA0', 'PDGFRA', 'UBTD2', 'NCAPH', 'TARDBP', 'TRAM1', 'RAB4A', 'C12ORF76', 'CTDSPL', 'MOV10', 'SCO1', 'CDC14C', 'ISCU', 'NIPAL3', 'SEPT8', 'UBQLN1', 'CD74', 'PIGH', 'PDP2', 'ITGB7', 'RNF38', 'GREB1', 'HLA-DMB', 'IBTK', 'ARHGAP20', 'QKI', 'ZNF182', 'LARP1', 'BAZ2A', 'CCPG1', 'ABHD16A', 'PRMT1', 'METTL17', 'ACOX3', 'EPCAM', 'ARID4A', 'HCAR1', 'ARHGEF3', 'TARS', 'BASP1', 'DHX34', 'SPCS1', 'BLOC1S2', 'SEMA3F', 'ZNF843', 'PRSS16', 'KLF8', 'POLR3E', 'MTMR9LP', 'UBR4', 'ADPRH', 'CDKN1B', 'ZBED3', 'DAZAP2', 'LOC100129534', 'LPP', 'BDP1', 'NUBP1', 'PHF13', 'BMS1P4', 'ZNF276', 'ASB14', 'ATP5F1', 'KRBA1', 'DXO', 'GEMIN4', 'CHEK1', 'ELAC2', 'PPIL3', 'SLC16A4', 'ZNF782', 'ZNF638', 'CHD8', 'LDLRAP1', 'DGKZ', 'ZNF835', 'HNF4G', 'GLT8D1', 'DHX38', 'LRRC57', 'ZNF197', 'ABAT', 'CCZ1B', 'TPM3', 'CDIP1', 'SARDH', 'ZNF815P', 'TMEM9B', 'CCDC101', 'TMEM260', 'EBF3', 'ZNF621', 'ANAPC13', 'EZH1', 'ZNF142', 'SLC7A4', 'UBQLN4', 'ARPC1A', 'ZNF542P', 'ELF2', 'TSPAN33', 'ADGRA2', 'C18ORF54', 'COX7A2L', 'NR1D2', 'WDR59', 'LOC90784', 'OLR1', 'TUBG2', 'ZSCAN32', 'SUGP1', 'NOP9', 'DYNLL1', 'ZC3HAV1L', 'C15ORF52', 'C1ORF131', 'GCN1L1', 'TAOK3', 'NDC80', 'RRN3P3', 'RSL24D1', 'CLASRP', 'C8ORF37', 'SNAPIN', 'ACOT1', 'SPC24', 'MELK', 'KIF23', 'CPNE2', 'MFAP1', 'UBN1', 'PRKAB1', 'CAPN8', 'LINC01140', 'PSAT1', 'TMEM170A', 'SEMA6B', 'ENTPD7', 'H2AFZ', 'TP53', 'LILRA1', 'ARHGEF16', 'EIF4E3', 'ANKRD52', 'SMIM15', 'MNT', 'THAP11', 'INTS7', 'FAM83H', 'AIG1', 'ROGDI', 'PPP3CC', 'PTGFRN', 'TOMM20', 'PMS2P3', 'DHX9', 'LINC00847', 'GTF2IRD2P1', 'NFATC3', 'TNFSF13', 'GOLGA6L9', 'GTF2H3', 'ATP6AP1', 'ACTR3', 'ZC3H18', 'NFAM1', 'CDC25C', 'MLF1', 'GAB3', 'TBCEL', 'TOR3A', 'SP100', 'SQRDL', 'POLR2J2', 'C11ORF49', 'RBM3', 'JAZF1', 'FKBP15', 'NEK2', 'WDR36', 'EGR3', 'PDE6B', 'CHCHD3', 'ANTXR2', 'ATP5L', 'TMEM251', 'RRAGB', 'ZNF268', 'HDGF', 'OTUB2', 'JOSD1', 'HNRNPH1', 'RFWD3', 'MARK1', 'AXIN2', 'BICC1', 'EFCAB14', 'SAMD1', 'TUBA1C', 'TAF15', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.999999826612211 Coefficient of Determination: 1.0 RMSE: 2.9229538582031267e-15 NRMSE: 7.888213528116883e-16 MAPE: 2.255996061905891e-12 Pearson Correlation: 0.2523437369797802 Spearman Correlation: 0.2267085624509034 Coefficient of Determination: -2.068925785846793 RMSE: 0.7304616667741078 NRMSE: 0.35341955196053293 MAPE: 419.2711202195797 Predictor: ElasticNet Pearson Correlation: 0.40984482195427835 Spearman Correlation: 0.4091519704935674 Coefficient of Determination: 0.09611361119908868 RMSE: 0.4458067223097287 NRMSE: 0.12031043897527943 MAPE: 235.42867979029404 Pearson Correlation: 0.49029625787662495 Spearman Correlation: 0.5029563959650369 Coefficient of Determination: 0.08444743910662278 RMSE: 0.39897517846921515 NRMSE: 0.1930363155683145 MAPE: 229.6193926244299 Predictor: RandomForests Pearson Correlation: 0.5607241565493746 Spearman Correlation: 0.5405950858465255 Coefficient of Determination: 0.2819788015075567 RMSE: 0.3973363726983032 NRMSE: 0.10722968279281797 MAPE: 245.61335747109152 Pearson Correlation: 0.5372370348913343 Spearman Correlation: 0.5372261499519945 Coefficient of Determination: 0.24023362937285864 RMSE: 0.3634496626469789 NRMSE: 0.17584799144925534 MAPE: 223.4765987814619
TMM
scenario = Scenario.ThousandMostVariableGenes_Mutations
normalizeTechnique = NormalizeTechnique.TMM
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12.2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 6.676054 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SH-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SJ-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SK-01 | 6.676054 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SQ-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 1002 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'LINC01119', 'IQUB', 'NKPD1', 'LINC01341', 'SOX8', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'PPP1R3G', 'C19ORF18', 'FXYD1', 'RNF138P1', 'CCIN', 'MYCBPAP', 'ETV2', 'XPNPEP2', 'TEKT3', 'STKLD1', 'SLC30A8', 'UGT8', 'SLC28A3', 'CCR8', 'METTL7B', 'HEPACAM2', 'UBE2Q2P1', 'TEX14', 'PLP1', 'SLC25A18', 'JPH4', 'IDI2.AS1', 'CASQ1', 'S100A3', 'LINC00482', 'LRIT3', 'GLIS1', 'SGK2', 'CCDC36', 'NR1I3', 'ALOXE3', 'ZNF843', 'CACNG1', 'MS4A15', 'WNT2B', 'PBX4', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'LGALS2', 'PYGO1', 'TMEM92', 'FUT9', 'ADAMTS8', 'BCHE', 'AOC2', 'GJB1', 'C9ORF43', 'CCDC151', 'FCRL6', 'PNCK', 'PITX2', 'TNNI3K', 'FAM189A1', 'DQX1', 'LPAR3', 'CKMT2', 'ABCA17P', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'NLRP12', 'C1ORF101', 'CLDN9', 'IYD', 'ZNF835', 'SLC6A20', 'OTOA', 'CA3', 'SPIB', 'FAM95B1', 'FAM90A1', 'C1ORF95', 'C2CD4A', 'RYR2', 'PCDH9', 'CCDC158', 'CLEC3A', 'SCN2B', 'CLECL1', 'PCSK1N', 'ULBP3', 'SVOPL', 'LINC01550', 'GSDMC', 'ARC', 'TAS1R3', 'CCDC65', 'IL20RB', 'DDX11L2', 'VSIG1', 'AURKC', 'TTC16', 'ZCCHC18', 'PDE1C', 'ALDH8A1', 'COLCA2', 'PCYT1B', 'MYOZ1', 'BPIFB2', 'KNDC1', 'B3GALT5.AS1', 'DUOXA1', 'CRYGS', 'GSTM1', 'PPP1R36', 'KLHL4', 'LOC148709', 'LOC441455', 'CPEB1', 'OR7E91P', 'IL22RA1', 'HOXD3', 'TARP', 'FAM57B', 'LOC90768', 'CAMP', 'JPH3', 'LUZP2', 'FUT7', 'IL12RB2', 'PLA2G5', 'RIMS1', 'FLJ37201', 'LBX2', 'SCARA5', 'RELN', 'HOXB13', 'CD177', 'IGSF5', 'TUBB8', 'SLC22A18AS', 'HIST1H2BN', 'ZBED3.AS1', 'GPR18', 'ASTN1', 'ZC3H12D', 'KCNE1', 'MNX1', 'TCHH', 'CIDEA', 'ONECUT2', 'GAL', 'KCNE2', 'SP5', 'WDR72', 'BTBD8', 'CHRNA6', 'FAM135B', 'IRX4', 'C10ORF128', 'SLC16A10', 'RSPH4A', 'MGC16142', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'CCDC7', 'MGAT5B', 'YPEL4', 'GBP1P1', 'DCSTAMP', 'CELF5', 'CXXC4', 'GRIN2C', 'GPR3', 'SKIDA1', 'OBP2B', 'CXCR5', 'SLC35F1', 'PYDC1', 'SLC30A2', 'HOXA11', 'NIPAL1', 'ATP13A5', 'CCDC153', 'FOXJ1', 'STRC', 'SRL', 'WT1', 'PCSK9', 'PCAT18', 'TNFRSF9', 'LRP1B', 'RPGRIP1', 'INSM1', 'GPR174', 'CNNM1', 'PCK1', 'NOXO1', 'SLC18A2', 'C17ORF104', 'SLC25A53', 'FOXD4', 'DMRT3', 'PPP4R4', 'MARCO', 'GPX2', 'LBP', 'IL20', 'COL23A1', 'INHA', 'FOXD1', 'NOS2', 'PKNOX2', 'BTLA', 'TNFRSF17', 'CRISP3', 'ADH1C', 'KLHL14', 'AVPR2', 'CXCL2', 'GLOD5', 'MYBPC1', 'PARP15', 'GPLD1', 'PFN1P2', 'GPR55', 'CST9', 'SLCO4C1', 'STEAP1B', 'BCL2L14', 'SLC23A1', 'C2ORF40', 'DHRS4L1', 'SCN3A', 'AMH', 'CXCR2P1', 'ZNF98', 'VAT1L', 'ULBP2', 'VSIG2', 'ZNF454', 'RNF212', 'TPSG1', 'VGLL1', 'CYSLTR2', 'HAP1', 'P2RX1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'TMEM105', 'ORM1', 'FAM178B', 'DKK1', 'ZNF488', 'IL23A', 'DPY19L2P2', 'AMBP', 'PRKG2', 'CXCL1', 'SIGLEC17P', 'CRYM', 'SUCNR1', 'DEPDC4', 'SPDYE1', 'FABP7', 'LRRC2', 'GPBAR1', 'CTCFL', 'BRINP1', 'BDKRB1', 'LRGUK', 'XIRP1', 'ADAMTS18', 'VWDE', 'LINC00930', 'FUT6', 'RERGL', 'TENM1', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'KIAA0319', 'NUGGC', 'CECR2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'PKD1L1', 'SSUH2', 'WSCD2', 'CBLN2', 'ECEL1', 'SPESP1', 'SEC14L5', 'ABHD11.AS1', 'FSCN2', 'DMRT2', 'CCL17', 'ZNF732', 'FAM162B', 'PIANP', 'HOXD4', 'GNB3', 'TMEM217', 'CTSG', 'GRIA3', 'RSPO1', 'RGS6', 'SERPINA6', 'ADAMTS19', 'IL1R2', 'MT1A', 'RNF175', 'ADAM32', 'COL2A1', 'CHRNB2', 'FLJ12825', 'POM121L9P', 'PFKFB1', 'RASL10A', 'HECTD2.AS1', 'PRSS21', 'DIRC3', 'LRRC16B', 'CYP46A1', 'SMIM5', 'FOXC2', 'CAPN11', 'ZNF804A', 'IGF2BP3', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'CYSRT1', 'VIPR2', 'GPR87', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'SLC13A2', 'XKR9', 'CA9', 'HTR7', 'HOGA1', 'EMX1', 'WIPF3', 'CEP83.AS1', 'ZSCAN1', 'ZBTB16', 'CITED1', 'OTUD7A', 'TMEM40', 'CYP26A1', 'TMSB15A', 'WFDC3', 'MAPT.IT1', 'CDHR1', 'ANKK1', 'GZMM', 'ROPN1L', 'PVALB', 'FIRRE', 'M1AP', 'MYO3B', 'INE2', 'CRTAC1', 'MRAP2', 'IGSF22', 'RFX8', 'RBM12B.AS1', 'SPAG17', 'TTC23L', 'HEATR4', 'PYGM', 'MROH7', 'PCDHA12', 'CFAP61', 'BTC', 'KCNT2', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'B3GAT1', 'OPCML', 'SRSF12', 'NWD1', 'LRRC4B', 'CIDEC', 'CCBE1', 'ADGRF1', 'CLEC4E', 'MIA', 'LINC00173', 'TMEM59L', 'HPDL', 'TSPAN8', 'RNF182', 'FRMPD1', 'GALNT13', 'SMC1B', 'KCNA6', 'KLK6', 'LSAMP', 'LOC613037', 'ABCC6P2', 'FASLG', 'IL11', 'NLRP7', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'COL28A1', 'C15ORF56', 'FAM83A', 'PSORS1C1', 'ANO5', 'SLC16A11', 'PTCHD1', 'SLC6A14', 'SLC24A5', 'C9ORF47', 'ADGRG2', 'TMPRSS4', 'TUSC5', 'LINC00908', 'RUFY4', 'CYP4F12', 'INTS4P2', 'PIK3C2G', 'IGSF1', 'KCNQ3', 'LOC100133669', 'VENTX', 'MYOM2', 'FAM157A', 'NBPF4', 'EBF2', 'MAG', 'DSCAML1', 'PCDHA5', 'PTPRN', 'KLK7', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'SFTPA2', 'CNTN2', 'ZBTB20', 'FAM19A2', 'NKX3.2', 'DLX5', 'PLAC1', 'CCNI2', 'BRE.AS1', 'OR2W3', 'SLC6A17', 'RYR3', 'GHRLOS', 'ABCC2', 'PTPRR', 'ABCD2', 'TFAP2E', 'CD160', 'GRIA2', 'CD1A', 'DEFB1', 'CCDC144A', 'RGS9', 'DLK2', 'CACNA1I', 'GGT3P', 'CDKL2', 'MYO16', 'PWAR5', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'CABP4', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CHRNA10', 'TCEAL2', 'FKBP1AP1', 'UNC13A', 'AGBL4', 'SLC39A2', 'XCL2', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'ZNF727', 'LINC00202.1', 'KCNH3', 'ARL9', 'TM6SF2', 'MAK', 'SNORD116.4', 'TCN1', 'P2RY12', 'GRID2IP', 'MPL', 'HRCT1', 'PCBP3', 'SYCE3', 'TCTEX1D1', 'ELOVL3', 'GPM6A', 'CD70', 'NOX5', 'SLC46A2', 'SYCE2', 'GRIN2A', 'ARMC3', 'JAKMIP1', 'PGLYRP2', 'TIGD4', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'KLF3.AS1', 'SOSTDC1', 'ASIC3', 'LONRF3', 'LRRC43', 'AGAP7P', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'LOC400927', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'ACHE', 'CEACAM7', 'RIMS2', 'OLFM4', 'CTAGE11P', 'TMEM145', 'CD40LG', 'C6ORF52', 'HRC', 'BEGAIN', 'VN1R1', 'GPR82', 'CXADRP3', 'PAH', 'CHODL', 'TTBK1', 'LOC285593', 'MLLT4.AS1', 'CHST9', 'TTYH1', 'HIST1H2BH', 'APOBEC3A', 'GABRB3', 'ADGRL3', 'SLC25A34', 'BRSK2', 'TRH', 'MAPK4', 'CAMK4', 'DGCR5', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'EPYC', 'GBP6', 'MUC15', 'GPR63', 'CAPSL', 'SLC35F3', 'ANKLE1', 'IL17D', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'TNFSF11', 'RMRP', 'FAM201A', 'HAMP', 'MYO15A', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'PTX3', 'DCLK3', 'RHCE', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'ROPN1B', 'RUNDC3A', 'LOC100132215', 'CYP2E1', 'C1QL3', 'UCKL1.AS1', 'PNMA6A', 'LINC00961', 'CYTL1', 'FOLR1', 'RRN3P1', 'XCL1', 'SIGLEC6', 'LINC00689', 'RRN3P2', 'HBA1', 'ATP13A4', 'THSD7B', 'SLC2A14', 'ADRA2B', 'MT1L', 'ZMAT4', 'TMEM150B', 'IL1RL1', 'KISS1R', 'CCR10', 'KIF19', 'IL24', 'GLI1', 'GPR173', 'ARRDC3.AS1', 'DPEP1', 'LIN7A', 'TTLL9', 'PRRT4', 'NIPAL4', 'KIAA1210', 'GPR135', 'WBP2NL', 'A2ML1', 'RHBG', 'B3GALT5', 'PCDHB18P', 'GNMT', 'RRAD', 'CBLN1', 'FIGF', 'DPF3', 'LOC90246', 'OXGR1', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'MAP7D2', 'CACNA2D3', 'DPY19L2P4', 'MS4A8', 'SLC5A8', 'HIST1H1D', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PCDH20', 'GABRB2', 'DNAH11', 'TIFAB', 'PON3', 'KLK8', 'FOXN1', 'PHKG1', 'WFIKKN1', 'MASP2', 'CD19', 'GPR171', 'WNT10A', 'FREM2', 'LINC00669', 'ANK1', 'DCST2', 'C19ORF45', 'CRB2', 'CLCA2', 'KCNB1', 'SLC26A3', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'LINC01465', 'LINC00685', 'TYMSOS', 'RASAL1', 'CD1E', 'ANO2', 'RIC3', 'COLCA1', 'CST2', 'HNRNPCL3', 'NEURL3', 'LOC646999', 'MED12L', 'TTC41P', 'PCDHGC5', 'EYA1', 'STXBP6', 'RAB3B', 'CLPSL1', 'MYEOV', 'NRXN1', 'FAM182B', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'TDRD9', 'AJAP1', 'ZNF676', 'CR2', 'CLDN14', 'CXCR2', 'LPAR4', 'KIF4B', 'PATL2', 'FNDC8', 'CLEC4F', 'MSLN', 'KCNRG', 'MKX', 'ABHD1', 'C9ORF117', 'PDCD1', 'MAGEL2', 'NDP', 'VIT', 'HAPLN1', 'SEZ6L', 'DMRTC1B', 'POU3F1', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 1.534633946433648e-15 NRMSE: 5.81190663296212e-16 MAPE: 9.470693046934934e-12 Pearson Correlation: 0.20026583310610027 Spearman Correlation: 0.2507121256462784 Coefficient of Determination: -0.631776880920818 RMSE: 0.3582704566039036 NRMSE: 0.1769909825483782 MAPE: 683.8426062592881 Predictor: ElasticNet Pearson Correlation: 0.5641636511204424 Spearman Correlation: 0.49428012065278465 Coefficient of Determination: 0.22787287724989502 RMSE: 0.19692008127800145 NRMSE: 0.07457681548115941 MAPE: 380.97895205611246 Pearson Correlation: 0.3290020162175716 Spearman Correlation: 0.38152375378011905 Coefficient of Determination: 0.061003099184835374 RMSE: 0.2717769927376389 NRMSE: 0.13426191328931933 MAPE: 184.31368453356262 Predictor: RandomForests Pearson Correlation: 0.49664403861044387 Spearman Correlation: 0.4648054456797444 Coefficient of Determination: 0.13297950828757266 RMSE: 0.20867012835637352 NRMSE: 0.07902674809936508 MAPE: 232.81869428000527 Pearson Correlation: 0.34501342816280745 Spearman Correlation: 0.36810067310506295 Coefficient of Determination: 0.03710906697913663 RMSE: 0.27521313530838404 NRMSE: 0.13595941928949973 MAPE: 156.3640860126701 Protein: CDH1 x_train_column_count: 1002 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'LINC01119', 'IQUB', 'NKPD1', 'LINC01341', 'SOX8', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'PPP1R3G', 'C19ORF18', 'FXYD1', 'RNF138P1', 'CCIN', 'MYCBPAP', 'ETV2', 'XPNPEP2', 'TEKT3', 'STKLD1', 'SLC30A8', 'UGT8', 'SLC28A3', 'CCR8', 'METTL7B', 'HEPACAM2', 'UBE2Q2P1', 'TEX14', 'PLP1', 'SLC25A18', 'JPH4', 'IDI2.AS1', 'CASQ1', 'S100A3', 'LINC00482', 'LRIT3', 'GLIS1', 'SGK2', 'CCDC36', 'NR1I3', 'ALOXE3', 'ZNF843', 'CACNG1', 'MS4A15', 'WNT2B', 'PBX4', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'LGALS2', 'PYGO1', 'TMEM92', 'FUT9', 'ADAMTS8', 'BCHE', 'AOC2', 'GJB1', 'C9ORF43', 'CCDC151', 'FCRL6', 'PNCK', 'PITX2', 'TNNI3K', 'FAM189A1', 'DQX1', 'LPAR3', 'CKMT2', 'ABCA17P', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'NLRP12', 'C1ORF101', 'CLDN9', 'IYD', 'ZNF835', 'SLC6A20', 'OTOA', 'CA3', 'SPIB', 'FAM95B1', 'FAM90A1', 'C1ORF95', 'C2CD4A', 'RYR2', 'PCDH9', 'CCDC158', 'CLEC3A', 'SCN2B', 'CLECL1', 'PCSK1N', 'ULBP3', 'SVOPL', 'LINC01550', 'GSDMC', 'ARC', 'TAS1R3', 'CCDC65', 'IL20RB', 'DDX11L2', 'VSIG1', 'AURKC', 'TTC16', 'ZCCHC18', 'PDE1C', 'ALDH8A1', 'COLCA2', 'PCYT1B', 'MYOZ1', 'BPIFB2', 'KNDC1', 'B3GALT5.AS1', 'DUOXA1', 'CRYGS', 'GSTM1', 'PPP1R36', 'KLHL4', 'LOC148709', 'LOC441455', 'CPEB1', 'OR7E91P', 'IL22RA1', 'HOXD3', 'TARP', 'FAM57B', 'LOC90768', 'CAMP', 'JPH3', 'LUZP2', 'FUT7', 'IL12RB2', 'PLA2G5', 'RIMS1', 'FLJ37201', 'LBX2', 'SCARA5', 'RELN', 'HOXB13', 'CD177', 'IGSF5', 'TUBB8', 'SLC22A18AS', 'HIST1H2BN', 'ZBED3.AS1', 'GPR18', 'ASTN1', 'ZC3H12D', 'KCNE1', 'MNX1', 'TCHH', 'CIDEA', 'ONECUT2', 'GAL', 'KCNE2', 'SP5', 'WDR72', 'BTBD8', 'CHRNA6', 'FAM135B', 'IRX4', 'C10ORF128', 'SLC16A10', 'RSPH4A', 'MGC16142', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'CCDC7', 'MGAT5B', 'YPEL4', 'GBP1P1', 'DCSTAMP', 'CELF5', 'CXXC4', 'GRIN2C', 'GPR3', 'SKIDA1', 'OBP2B', 'CXCR5', 'SLC35F1', 'PYDC1', 'SLC30A2', 'HOXA11', 'NIPAL1', 'ATP13A5', 'CCDC153', 'FOXJ1', 'STRC', 'SRL', 'WT1', 'PCSK9', 'PCAT18', 'TNFRSF9', 'LRP1B', 'RPGRIP1', 'INSM1', 'GPR174', 'CNNM1', 'PCK1', 'NOXO1', 'SLC18A2', 'C17ORF104', 'SLC25A53', 'FOXD4', 'DMRT3', 'PPP4R4', 'MARCO', 'GPX2', 'LBP', 'IL20', 'COL23A1', 'INHA', 'FOXD1', 'NOS2', 'PKNOX2', 'BTLA', 'TNFRSF17', 'CRISP3', 'ADH1C', 'KLHL14', 'AVPR2', 'CXCL2', 'GLOD5', 'MYBPC1', 'PARP15', 'GPLD1', 'PFN1P2', 'GPR55', 'CST9', 'SLCO4C1', 'STEAP1B', 'BCL2L14', 'SLC23A1', 'C2ORF40', 'DHRS4L1', 'SCN3A', 'AMH', 'CXCR2P1', 'ZNF98', 'VAT1L', 'ULBP2', 'VSIG2', 'ZNF454', 'RNF212', 'TPSG1', 'VGLL1', 'CYSLTR2', 'HAP1', 'P2RX1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'TMEM105', 'ORM1', 'FAM178B', 'DKK1', 'ZNF488', 'IL23A', 'DPY19L2P2', 'AMBP', 'PRKG2', 'CXCL1', 'SIGLEC17P', 'CRYM', 'SUCNR1', 'DEPDC4', 'SPDYE1', 'FABP7', 'LRRC2', 'GPBAR1', 'CTCFL', 'BRINP1', 'BDKRB1', 'LRGUK', 'XIRP1', 'ADAMTS18', 'VWDE', 'LINC00930', 'FUT6', 'RERGL', 'TENM1', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'KIAA0319', 'NUGGC', 'CECR2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'PKD1L1', 'SSUH2', 'WSCD2', 'CBLN2', 'ECEL1', 'SPESP1', 'SEC14L5', 'ABHD11.AS1', 'FSCN2', 'DMRT2', 'CCL17', 'ZNF732', 'FAM162B', 'PIANP', 'HOXD4', 'GNB3', 'TMEM217', 'CTSG', 'GRIA3', 'RSPO1', 'RGS6', 'SERPINA6', 'ADAMTS19', 'IL1R2', 'MT1A', 'RNF175', 'ADAM32', 'COL2A1', 'CHRNB2', 'FLJ12825', 'POM121L9P', 'PFKFB1', 'RASL10A', 'HECTD2.AS1', 'PRSS21', 'DIRC3', 'LRRC16B', 'CYP46A1', 'SMIM5', 'FOXC2', 'CAPN11', 'ZNF804A', 'IGF2BP3', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'CYSRT1', 'VIPR2', 'GPR87', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'SLC13A2', 'XKR9', 'CA9', 'HTR7', 'HOGA1', 'EMX1', 'WIPF3', 'CEP83.AS1', 'ZSCAN1', 'ZBTB16', 'CITED1', 'OTUD7A', 'TMEM40', 'CYP26A1', 'TMSB15A', 'WFDC3', 'MAPT.IT1', 'CDHR1', 'ANKK1', 'GZMM', 'ROPN1L', 'PVALB', 'FIRRE', 'M1AP', 'MYO3B', 'INE2', 'CRTAC1', 'MRAP2', 'IGSF22', 'RFX8', 'RBM12B.AS1', 'SPAG17', 'TTC23L', 'HEATR4', 'PYGM', 'MROH7', 'PCDHA12', 'CFAP61', 'BTC', 'KCNT2', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'B3GAT1', 'OPCML', 'SRSF12', 'NWD1', 'LRRC4B', 'CIDEC', 'CCBE1', 'ADGRF1', 'CLEC4E', 'MIA', 'LINC00173', 'TMEM59L', 'HPDL', 'TSPAN8', 'RNF182', 'FRMPD1', 'GALNT13', 'SMC1B', 'KCNA6', 'KLK6', 'LSAMP', 'LOC613037', 'ABCC6P2', 'FASLG', 'IL11', 'NLRP7', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'COL28A1', 'C15ORF56', 'FAM83A', 'PSORS1C1', 'ANO5', 'SLC16A11', 'PTCHD1', 'SLC6A14', 'SLC24A5', 'C9ORF47', 'ADGRG2', 'TMPRSS4', 'TUSC5', 'LINC00908', 'RUFY4', 'CYP4F12', 'INTS4P2', 'PIK3C2G', 'IGSF1', 'KCNQ3', 'LOC100133669', 'VENTX', 'MYOM2', 'FAM157A', 'NBPF4', 'EBF2', 'MAG', 'DSCAML1', 'PCDHA5', 'PTPRN', 'KLK7', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'SFTPA2', 'CNTN2', 'ZBTB20', 'FAM19A2', 'NKX3.2', 'DLX5', 'PLAC1', 'CCNI2', 'BRE.AS1', 'OR2W3', 'SLC6A17', 'RYR3', 'GHRLOS', 'ABCC2', 'PTPRR', 'ABCD2', 'TFAP2E', 'CD160', 'GRIA2', 'CD1A', 'DEFB1', 'CCDC144A', 'RGS9', 'DLK2', 'CACNA1I', 'GGT3P', 'CDKL2', 'MYO16', 'PWAR5', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'CABP4', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CHRNA10', 'TCEAL2', 'FKBP1AP1', 'UNC13A', 'AGBL4', 'SLC39A2', 'XCL2', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'ZNF727', 'LINC00202.1', 'KCNH3', 'ARL9', 'TM6SF2', 'MAK', 'SNORD116.4', 'TCN1', 'P2RY12', 'GRID2IP', 'MPL', 'HRCT1', 'PCBP3', 'SYCE3', 'TCTEX1D1', 'ELOVL3', 'GPM6A', 'CD70', 'NOX5', 'SLC46A2', 'SYCE2', 'GRIN2A', 'ARMC3', 'JAKMIP1', 'PGLYRP2', 'TIGD4', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'KLF3.AS1', 'SOSTDC1', 'ASIC3', 'LONRF3', 'LRRC43', 'AGAP7P', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'LOC400927', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'ACHE', 'CEACAM7', 'RIMS2', 'OLFM4', 'CTAGE11P', 'TMEM145', 'CD40LG', 'C6ORF52', 'HRC', 'BEGAIN', 'VN1R1', 'GPR82', 'CXADRP3', 'PAH', 'CHODL', 'TTBK1', 'LOC285593', 'MLLT4.AS1', 'CHST9', 'TTYH1', 'HIST1H2BH', 'APOBEC3A', 'GABRB3', 'ADGRL3', 'SLC25A34', 'BRSK2', 'TRH', 'MAPK4', 'CAMK4', 'DGCR5', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'EPYC', 'GBP6', 'MUC15', 'GPR63', 'CAPSL', 'SLC35F3', 'ANKLE1', 'IL17D', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'TNFSF11', 'RMRP', 'FAM201A', 'HAMP', 'MYO15A', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'PTX3', 'DCLK3', 'RHCE', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'ROPN1B', 'RUNDC3A', 'LOC100132215', 'CYP2E1', 'C1QL3', 'UCKL1.AS1', 'PNMA6A', 'LINC00961', 'CYTL1', 'FOLR1', 'RRN3P1', 'XCL1', 'SIGLEC6', 'LINC00689', 'RRN3P2', 'HBA1', 'ATP13A4', 'THSD7B', 'SLC2A14', 'ADRA2B', 'MT1L', 'ZMAT4', 'TMEM150B', 'IL1RL1', 'KISS1R', 'CCR10', 'KIF19', 'IL24', 'GLI1', 'GPR173', 'ARRDC3.AS1', 'DPEP1', 'LIN7A', 'TTLL9', 'PRRT4', 'NIPAL4', 'KIAA1210', 'GPR135', 'WBP2NL', 'A2ML1', 'RHBG', 'B3GALT5', 'PCDHB18P', 'GNMT', 'RRAD', 'CBLN1', 'FIGF', 'DPF3', 'LOC90246', 'OXGR1', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'MAP7D2', 'CACNA2D3', 'DPY19L2P4', 'MS4A8', 'SLC5A8', 'HIST1H1D', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PCDH20', 'GABRB2', 'DNAH11', 'TIFAB', 'PON3', 'KLK8', 'FOXN1', 'PHKG1', 'WFIKKN1', 'MASP2', 'CD19', 'GPR171', 'WNT10A', 'FREM2', 'LINC00669', 'ANK1', 'DCST2', 'C19ORF45', 'CRB2', 'CLCA2', 'KCNB1', 'SLC26A3', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'LINC01465', 'LINC00685', 'TYMSOS', 'RASAL1', 'CD1E', 'ANO2', 'RIC3', 'COLCA1', 'CST2', 'HNRNPCL3', 'NEURL3', 'LOC646999', 'MED12L', 'TTC41P', 'PCDHGC5', 'EYA1', 'STXBP6', 'RAB3B', 'CLPSL1', 'MYEOV', 'NRXN1', 'FAM182B', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'TDRD9', 'AJAP1', 'ZNF676', 'CR2', 'CLDN14', 'CXCR2', 'LPAR4', 'KIF4B', 'PATL2', 'FNDC8', 'CLEC4F', 'MSLN', 'KCNRG', 'MKX', 'ABHD1', 'C9ORF117', 'PDCD1', 'MAGEL2', 'NDP', 'VIT', 'HAPLN1', 'SEZ6L', 'DMRTC1B', 'POU3F1', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 4.1091521268196e-15 NRMSE: 6.906950610693022e-16 MAPE: 5.0628208721048805e-12 Pearson Correlation: 0.3745291514631202 Spearman Correlation: 0.28275777972880695 Coefficient of Determination: -0.16024749521796622 RMSE: 1.2498203753357542 NRMSE: 0.20242628605094656 MAPE: 493.1066058207135 Predictor: ElasticNet Pearson Correlation: 0.9320317512125068 Spearman Correlation: 0.8899039464470755 Coefficient of Determination: 0.8281445592111991 RMSE: 0.4677963668009093 NRMSE: 0.07863048876353677 MAPE: 371.69236851467275 Pearson Correlation: 0.5649826404325569 Spearman Correlation: 0.46669105453126536 Coefficient of Determination: 0.3107230389006671 RMSE: 0.9633168614500662 NRMSE: 0.15602294409803152 MAPE: 367.61800364440523 Predictor: RandomForests Pearson Correlation: 0.6457309675788031 Spearman Correlation: 0.5863746662729191 Coefficient of Determination: 0.40955529367684396 RMSE: 0.8670912787334071 NRMSE: 0.145746773357102 MAPE: 301.68368701319656 Pearson Correlation: 0.6752022431578558 Spearman Correlation: 0.6075690361178836 Coefficient of Determination: 0.43430456525353545 RMSE: 0.8726972706658058 NRMSE: 0.14134580523238732 MAPE: 199.82504418851127 Protein: CDH2 x_train_column_count: 1002 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'LINC01119', 'IQUB', 'NKPD1', 'LINC01341', 'SOX8', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'PPP1R3G', 'C19ORF18', 'FXYD1', 'RNF138P1', 'CCIN', 'MYCBPAP', 'ETV2', 'XPNPEP2', 'TEKT3', 'STKLD1', 'SLC30A8', 'UGT8', 'SLC28A3', 'CCR8', 'METTL7B', 'HEPACAM2', 'UBE2Q2P1', 'TEX14', 'PLP1', 'SLC25A18', 'JPH4', 'IDI2.AS1', 'CASQ1', 'S100A3', 'LINC00482', 'LRIT3', 'GLIS1', 'SGK2', 'CCDC36', 'NR1I3', 'ALOXE3', 'ZNF843', 'CACNG1', 'MS4A15', 'WNT2B', 'PBX4', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'LGALS2', 'PYGO1', 'TMEM92', 'FUT9', 'ADAMTS8', 'BCHE', 'AOC2', 'GJB1', 'C9ORF43', 'CCDC151', 'FCRL6', 'PNCK', 'PITX2', 'TNNI3K', 'FAM189A1', 'DQX1', 'LPAR3', 'CKMT2', 'ABCA17P', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'NLRP12', 'C1ORF101', 'CLDN9', 'IYD', 'ZNF835', 'SLC6A20', 'OTOA', 'CA3', 'SPIB', 'FAM95B1', 'FAM90A1', 'C1ORF95', 'C2CD4A', 'RYR2', 'PCDH9', 'CCDC158', 'CLEC3A', 'SCN2B', 'CLECL1', 'PCSK1N', 'ULBP3', 'SVOPL', 'LINC01550', 'GSDMC', 'ARC', 'TAS1R3', 'CCDC65', 'IL20RB', 'DDX11L2', 'VSIG1', 'AURKC', 'TTC16', 'ZCCHC18', 'PDE1C', 'ALDH8A1', 'COLCA2', 'PCYT1B', 'MYOZ1', 'BPIFB2', 'KNDC1', 'B3GALT5.AS1', 'DUOXA1', 'CRYGS', 'GSTM1', 'PPP1R36', 'KLHL4', 'LOC148709', 'LOC441455', 'CPEB1', 'OR7E91P', 'IL22RA1', 'HOXD3', 'TARP', 'FAM57B', 'LOC90768', 'CAMP', 'JPH3', 'LUZP2', 'FUT7', 'IL12RB2', 'PLA2G5', 'RIMS1', 'FLJ37201', 'LBX2', 'SCARA5', 'RELN', 'HOXB13', 'CD177', 'IGSF5', 'TUBB8', 'SLC22A18AS', 'HIST1H2BN', 'ZBED3.AS1', 'GPR18', 'ASTN1', 'ZC3H12D', 'KCNE1', 'MNX1', 'TCHH', 'CIDEA', 'ONECUT2', 'GAL', 'KCNE2', 'SP5', 'WDR72', 'BTBD8', 'CHRNA6', 'FAM135B', 'IRX4', 'C10ORF128', 'SLC16A10', 'RSPH4A', 'MGC16142', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'CCDC7', 'MGAT5B', 'YPEL4', 'GBP1P1', 'DCSTAMP', 'CELF5', 'CXXC4', 'GRIN2C', 'GPR3', 'SKIDA1', 'OBP2B', 'CXCR5', 'SLC35F1', 'PYDC1', 'SLC30A2', 'HOXA11', 'NIPAL1', 'ATP13A5', 'CCDC153', 'FOXJ1', 'STRC', 'SRL', 'WT1', 'PCSK9', 'PCAT18', 'TNFRSF9', 'LRP1B', 'RPGRIP1', 'INSM1', 'GPR174', 'CNNM1', 'PCK1', 'NOXO1', 'SLC18A2', 'C17ORF104', 'SLC25A53', 'FOXD4', 'DMRT3', 'PPP4R4', 'MARCO', 'GPX2', 'LBP', 'IL20', 'COL23A1', 'INHA', 'FOXD1', 'NOS2', 'PKNOX2', 'BTLA', 'TNFRSF17', 'CRISP3', 'ADH1C', 'KLHL14', 'AVPR2', 'CXCL2', 'GLOD5', 'MYBPC1', 'PARP15', 'GPLD1', 'PFN1P2', 'GPR55', 'CST9', 'SLCO4C1', 'STEAP1B', 'BCL2L14', 'SLC23A1', 'C2ORF40', 'DHRS4L1', 'SCN3A', 'AMH', 'CXCR2P1', 'ZNF98', 'VAT1L', 'ULBP2', 'VSIG2', 'ZNF454', 'RNF212', 'TPSG1', 'VGLL1', 'CYSLTR2', 'HAP1', 'P2RX1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'TMEM105', 'ORM1', 'FAM178B', 'DKK1', 'ZNF488', 'IL23A', 'DPY19L2P2', 'AMBP', 'PRKG2', 'CXCL1', 'SIGLEC17P', 'CRYM', 'SUCNR1', 'DEPDC4', 'SPDYE1', 'FABP7', 'LRRC2', 'GPBAR1', 'CTCFL', 'BRINP1', 'BDKRB1', 'LRGUK', 'XIRP1', 'ADAMTS18', 'VWDE', 'LINC00930', 'FUT6', 'RERGL', 'TENM1', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'KIAA0319', 'NUGGC', 'CECR2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'PKD1L1', 'SSUH2', 'WSCD2', 'CBLN2', 'ECEL1', 'SPESP1', 'SEC14L5', 'ABHD11.AS1', 'FSCN2', 'DMRT2', 'CCL17', 'ZNF732', 'FAM162B', 'PIANP', 'HOXD4', 'GNB3', 'TMEM217', 'CTSG', 'GRIA3', 'RSPO1', 'RGS6', 'SERPINA6', 'ADAMTS19', 'IL1R2', 'MT1A', 'RNF175', 'ADAM32', 'COL2A1', 'CHRNB2', 'FLJ12825', 'POM121L9P', 'PFKFB1', 'RASL10A', 'HECTD2.AS1', 'PRSS21', 'DIRC3', 'LRRC16B', 'CYP46A1', 'SMIM5', 'FOXC2', 'CAPN11', 'ZNF804A', 'IGF2BP3', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'CYSRT1', 'VIPR2', 'GPR87', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'SLC13A2', 'XKR9', 'CA9', 'HTR7', 'HOGA1', 'EMX1', 'WIPF3', 'CEP83.AS1', 'ZSCAN1', 'ZBTB16', 'CITED1', 'OTUD7A', 'TMEM40', 'CYP26A1', 'TMSB15A', 'WFDC3', 'MAPT.IT1', 'CDHR1', 'ANKK1', 'GZMM', 'ROPN1L', 'PVALB', 'FIRRE', 'M1AP', 'MYO3B', 'INE2', 'CRTAC1', 'MRAP2', 'IGSF22', 'RFX8', 'RBM12B.AS1', 'SPAG17', 'TTC23L', 'HEATR4', 'PYGM', 'MROH7', 'PCDHA12', 'CFAP61', 'BTC', 'KCNT2', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'B3GAT1', 'OPCML', 'SRSF12', 'NWD1', 'LRRC4B', 'CIDEC', 'CCBE1', 'ADGRF1', 'CLEC4E', 'MIA', 'LINC00173', 'TMEM59L', 'HPDL', 'TSPAN8', 'RNF182', 'FRMPD1', 'GALNT13', 'SMC1B', 'KCNA6', 'KLK6', 'LSAMP', 'LOC613037', 'ABCC6P2', 'FASLG', 'IL11', 'NLRP7', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'COL28A1', 'C15ORF56', 'FAM83A', 'PSORS1C1', 'ANO5', 'SLC16A11', 'PTCHD1', 'SLC6A14', 'SLC24A5', 'C9ORF47', 'ADGRG2', 'TMPRSS4', 'TUSC5', 'LINC00908', 'RUFY4', 'CYP4F12', 'INTS4P2', 'PIK3C2G', 'IGSF1', 'KCNQ3', 'LOC100133669', 'VENTX', 'MYOM2', 'FAM157A', 'NBPF4', 'EBF2', 'MAG', 'DSCAML1', 'PCDHA5', 'PTPRN', 'KLK7', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'SFTPA2', 'CNTN2', 'ZBTB20', 'FAM19A2', 'NKX3.2', 'DLX5', 'PLAC1', 'CCNI2', 'BRE.AS1', 'OR2W3', 'SLC6A17', 'RYR3', 'GHRLOS', 'ABCC2', 'PTPRR', 'ABCD2', 'TFAP2E', 'CD160', 'GRIA2', 'CD1A', 'DEFB1', 'CCDC144A', 'RGS9', 'DLK2', 'CACNA1I', 'GGT3P', 'CDKL2', 'MYO16', 'PWAR5', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'CABP4', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CHRNA10', 'TCEAL2', 'FKBP1AP1', 'UNC13A', 'AGBL4', 'SLC39A2', 'XCL2', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'ZNF727', 'LINC00202.1', 'KCNH3', 'ARL9', 'TM6SF2', 'MAK', 'SNORD116.4', 'TCN1', 'P2RY12', 'GRID2IP', 'MPL', 'HRCT1', 'PCBP3', 'SYCE3', 'TCTEX1D1', 'ELOVL3', 'GPM6A', 'CD70', 'NOX5', 'SLC46A2', 'SYCE2', 'GRIN2A', 'ARMC3', 'JAKMIP1', 'PGLYRP2', 'TIGD4', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'KLF3.AS1', 'SOSTDC1', 'ASIC3', 'LONRF3', 'LRRC43', 'AGAP7P', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'LOC400927', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'ACHE', 'CEACAM7', 'RIMS2', 'OLFM4', 'CTAGE11P', 'TMEM145', 'CD40LG', 'C6ORF52', 'HRC', 'BEGAIN', 'VN1R1', 'GPR82', 'CXADRP3', 'PAH', 'CHODL', 'TTBK1', 'LOC285593', 'MLLT4.AS1', 'CHST9', 'TTYH1', 'HIST1H2BH', 'APOBEC3A', 'GABRB3', 'ADGRL3', 'SLC25A34', 'BRSK2', 'TRH', 'MAPK4', 'CAMK4', 'DGCR5', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'EPYC', 'GBP6', 'MUC15', 'GPR63', 'CAPSL', 'SLC35F3', 'ANKLE1', 'IL17D', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'TNFSF11', 'RMRP', 'FAM201A', 'HAMP', 'MYO15A', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'PTX3', 'DCLK3', 'RHCE', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'ROPN1B', 'RUNDC3A', 'LOC100132215', 'CYP2E1', 'C1QL3', 'UCKL1.AS1', 'PNMA6A', 'LINC00961', 'CYTL1', 'FOLR1', 'RRN3P1', 'XCL1', 'SIGLEC6', 'LINC00689', 'RRN3P2', 'HBA1', 'ATP13A4', 'THSD7B', 'SLC2A14', 'ADRA2B', 'MT1L', 'ZMAT4', 'TMEM150B', 'IL1RL1', 'KISS1R', 'CCR10', 'KIF19', 'IL24', 'GLI1', 'GPR173', 'ARRDC3.AS1', 'DPEP1', 'LIN7A', 'TTLL9', 'PRRT4', 'NIPAL4', 'KIAA1210', 'GPR135', 'WBP2NL', 'A2ML1', 'RHBG', 'B3GALT5', 'PCDHB18P', 'GNMT', 'RRAD', 'CBLN1', 'FIGF', 'DPF3', 'LOC90246', 'OXGR1', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'MAP7D2', 'CACNA2D3', 'DPY19L2P4', 'MS4A8', 'SLC5A8', 'HIST1H1D', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PCDH20', 'GABRB2', 'DNAH11', 'TIFAB', 'PON3', 'KLK8', 'FOXN1', 'PHKG1', 'WFIKKN1', 'MASP2', 'CD19', 'GPR171', 'WNT10A', 'FREM2', 'LINC00669', 'ANK1', 'DCST2', 'C19ORF45', 'CRB2', 'CLCA2', 'KCNB1', 'SLC26A3', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'LINC01465', 'LINC00685', 'TYMSOS', 'RASAL1', 'CD1E', 'ANO2', 'RIC3', 'COLCA1', 'CST2', 'HNRNPCL3', 'NEURL3', 'LOC646999', 'MED12L', 'TTC41P', 'PCDHGC5', 'EYA1', 'STXBP6', 'RAB3B', 'CLPSL1', 'MYEOV', 'NRXN1', 'FAM182B', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'TDRD9', 'AJAP1', 'ZNF676', 'CR2', 'CLDN14', 'CXCR2', 'LPAR4', 'KIF4B', 'PATL2', 'FNDC8', 'CLEC4F', 'MSLN', 'KCNRG', 'MKX', 'ABHD1', 'C9ORF117', 'PDCD1', 'MAGEL2', 'NDP', 'VIT', 'HAPLN1', 'SEZ6L', 'DMRTC1B', 'POU3F1', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999031343205 Coefficient of Determination: 1.0 RMSE: 1.7004591083416461e-15 NRMSE: 6.282012465843007e-16 MAPE: 3.316934996177471e-11 Pearson Correlation: 0.14959437512302629 Spearman Correlation: 0.16060384352746074 Coefficient of Determination: -0.8375905559247796 RMSE: 0.508497468158853 NRMSE: 0.2624232172982675 MAPE: 403.215612533387 Predictor: ElasticNet Pearson Correlation: 0.7461765793669114 Spearman Correlation: 0.7385464029344758 Coefficient of Determination: 0.4490844277079534 RMSE: 0.27551421637416373 NRMSE: 0.10178332035678246 MAPE: 532.5587279928272 Pearson Correlation: 0.13310415540253284 Spearman Correlation: 0.18272851429128867 Coefficient of Determination: -0.05093909028392285 RMSE: 0.3845503339816127 NRMSE: 0.1984571058376491 MAPE: 155.2911820782817 Predictor: RandomForests Pearson Correlation: 0.4822351676712839 Spearman Correlation: 0.5019432515489283 Coefficient of Determination: 0.14219125670022048 RMSE: 0.3437927573180856 NRMSE: 0.12700748736292677 MAPE: 999.7452823803968 Pearson Correlation: 0.2119562186831894 Spearman Correlation: 0.24475660911130626 Coefficient of Determination: 0.04200036200049184 RMSE: 0.36715300938870615 NRMSE: 0.1894787683277629 MAPE: 110.45373552441804 Protein: CDH3 x_train_column_count: 1002 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'LINC01119', 'IQUB', 'NKPD1', 'LINC01341', 'SOX8', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'PPP1R3G', 'C19ORF18', 'FXYD1', 'RNF138P1', 'CCIN', 'MYCBPAP', 'ETV2', 'XPNPEP2', 'TEKT3', 'STKLD1', 'SLC30A8', 'UGT8', 'SLC28A3', 'CCR8', 'METTL7B', 'HEPACAM2', 'UBE2Q2P1', 'TEX14', 'PLP1', 'SLC25A18', 'JPH4', 'IDI2.AS1', 'CASQ1', 'S100A3', 'LINC00482', 'LRIT3', 'GLIS1', 'SGK2', 'CCDC36', 'NR1I3', 'ALOXE3', 'ZNF843', 'CACNG1', 'MS4A15', 'WNT2B', 'PBX4', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'LGALS2', 'PYGO1', 'TMEM92', 'FUT9', 'ADAMTS8', 'BCHE', 'AOC2', 'GJB1', 'C9ORF43', 'CCDC151', 'FCRL6', 'PNCK', 'PITX2', 'TNNI3K', 'FAM189A1', 'DQX1', 'LPAR3', 'CKMT2', 'ABCA17P', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'NLRP12', 'C1ORF101', 'CLDN9', 'IYD', 'ZNF835', 'SLC6A20', 'OTOA', 'CA3', 'SPIB', 'FAM95B1', 'FAM90A1', 'C1ORF95', 'C2CD4A', 'RYR2', 'PCDH9', 'CCDC158', 'CLEC3A', 'SCN2B', 'CLECL1', 'PCSK1N', 'ULBP3', 'SVOPL', 'LINC01550', 'GSDMC', 'ARC', 'TAS1R3', 'CCDC65', 'IL20RB', 'DDX11L2', 'VSIG1', 'AURKC', 'TTC16', 'ZCCHC18', 'PDE1C', 'ALDH8A1', 'COLCA2', 'PCYT1B', 'MYOZ1', 'BPIFB2', 'KNDC1', 'B3GALT5.AS1', 'DUOXA1', 'CRYGS', 'GSTM1', 'PPP1R36', 'KLHL4', 'LOC148709', 'LOC441455', 'CPEB1', 'OR7E91P', 'IL22RA1', 'HOXD3', 'TARP', 'FAM57B', 'LOC90768', 'CAMP', 'JPH3', 'LUZP2', 'FUT7', 'IL12RB2', 'PLA2G5', 'RIMS1', 'FLJ37201', 'LBX2', 'SCARA5', 'RELN', 'HOXB13', 'CD177', 'IGSF5', 'TUBB8', 'SLC22A18AS', 'HIST1H2BN', 'ZBED3.AS1', 'GPR18', 'ASTN1', 'ZC3H12D', 'KCNE1', 'MNX1', 'TCHH', 'CIDEA', 'ONECUT2', 'GAL', 'KCNE2', 'SP5', 'WDR72', 'BTBD8', 'CHRNA6', 'FAM135B', 'IRX4', 'C10ORF128', 'SLC16A10', 'RSPH4A', 'MGC16142', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'CCDC7', 'MGAT5B', 'YPEL4', 'GBP1P1', 'DCSTAMP', 'CELF5', 'CXXC4', 'GRIN2C', 'GPR3', 'SKIDA1', 'OBP2B', 'CXCR5', 'SLC35F1', 'PYDC1', 'SLC30A2', 'HOXA11', 'NIPAL1', 'ATP13A5', 'CCDC153', 'FOXJ1', 'STRC', 'SRL', 'WT1', 'PCSK9', 'PCAT18', 'TNFRSF9', 'LRP1B', 'RPGRIP1', 'INSM1', 'GPR174', 'CNNM1', 'PCK1', 'NOXO1', 'SLC18A2', 'C17ORF104', 'SLC25A53', 'FOXD4', 'DMRT3', 'PPP4R4', 'MARCO', 'GPX2', 'LBP', 'IL20', 'COL23A1', 'INHA', 'FOXD1', 'NOS2', 'PKNOX2', 'BTLA', 'TNFRSF17', 'CRISP3', 'ADH1C', 'KLHL14', 'AVPR2', 'CXCL2', 'GLOD5', 'MYBPC1', 'PARP15', 'GPLD1', 'PFN1P2', 'GPR55', 'CST9', 'SLCO4C1', 'STEAP1B', 'BCL2L14', 'SLC23A1', 'C2ORF40', 'DHRS4L1', 'SCN3A', 'AMH', 'CXCR2P1', 'ZNF98', 'VAT1L', 'ULBP2', 'VSIG2', 'ZNF454', 'RNF212', 'TPSG1', 'VGLL1', 'CYSLTR2', 'HAP1', 'P2RX1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'TMEM105', 'ORM1', 'FAM178B', 'DKK1', 'ZNF488', 'IL23A', 'DPY19L2P2', 'AMBP', 'PRKG2', 'CXCL1', 'SIGLEC17P', 'CRYM', 'SUCNR1', 'DEPDC4', 'SPDYE1', 'FABP7', 'LRRC2', 'GPBAR1', 'CTCFL', 'BRINP1', 'BDKRB1', 'LRGUK', 'XIRP1', 'ADAMTS18', 'VWDE', 'LINC00930', 'FUT6', 'RERGL', 'TENM1', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'KIAA0319', 'NUGGC', 'CECR2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'PKD1L1', 'SSUH2', 'WSCD2', 'CBLN2', 'ECEL1', 'SPESP1', 'SEC14L5', 'ABHD11.AS1', 'FSCN2', 'DMRT2', 'CCL17', 'ZNF732', 'FAM162B', 'PIANP', 'HOXD4', 'GNB3', 'TMEM217', 'CTSG', 'GRIA3', 'RSPO1', 'RGS6', 'SERPINA6', 'ADAMTS19', 'IL1R2', 'MT1A', 'RNF175', 'ADAM32', 'COL2A1', 'CHRNB2', 'FLJ12825', 'POM121L9P', 'PFKFB1', 'RASL10A', 'HECTD2.AS1', 'PRSS21', 'DIRC3', 'LRRC16B', 'CYP46A1', 'SMIM5', 'FOXC2', 'CAPN11', 'ZNF804A', 'IGF2BP3', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'CYSRT1', 'VIPR2', 'GPR87', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'SLC13A2', 'XKR9', 'CA9', 'HTR7', 'HOGA1', 'EMX1', 'WIPF3', 'CEP83.AS1', 'ZSCAN1', 'ZBTB16', 'CITED1', 'OTUD7A', 'TMEM40', 'CYP26A1', 'TMSB15A', 'WFDC3', 'MAPT.IT1', 'CDHR1', 'ANKK1', 'GZMM', 'ROPN1L', 'PVALB', 'FIRRE', 'M1AP', 'MYO3B', 'INE2', 'CRTAC1', 'MRAP2', 'IGSF22', 'RFX8', 'RBM12B.AS1', 'SPAG17', 'TTC23L', 'HEATR4', 'PYGM', 'MROH7', 'PCDHA12', 'CFAP61', 'BTC', 'KCNT2', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'B3GAT1', 'OPCML', 'SRSF12', 'NWD1', 'LRRC4B', 'CIDEC', 'CCBE1', 'ADGRF1', 'CLEC4E', 'MIA', 'LINC00173', 'TMEM59L', 'HPDL', 'TSPAN8', 'RNF182', 'FRMPD1', 'GALNT13', 'SMC1B', 'KCNA6', 'KLK6', 'LSAMP', 'LOC613037', 'ABCC6P2', 'FASLG', 'IL11', 'NLRP7', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'COL28A1', 'C15ORF56', 'FAM83A', 'PSORS1C1', 'ANO5', 'SLC16A11', 'PTCHD1', 'SLC6A14', 'SLC24A5', 'C9ORF47', 'ADGRG2', 'TMPRSS4', 'TUSC5', 'LINC00908', 'RUFY4', 'CYP4F12', 'INTS4P2', 'PIK3C2G', 'IGSF1', 'KCNQ3', 'LOC100133669', 'VENTX', 'MYOM2', 'FAM157A', 'NBPF4', 'EBF2', 'MAG', 'DSCAML1', 'PCDHA5', 'PTPRN', 'KLK7', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'SFTPA2', 'CNTN2', 'ZBTB20', 'FAM19A2', 'NKX3.2', 'DLX5', 'PLAC1', 'CCNI2', 'BRE.AS1', 'OR2W3', 'SLC6A17', 'RYR3', 'GHRLOS', 'ABCC2', 'PTPRR', 'ABCD2', 'TFAP2E', 'CD160', 'GRIA2', 'CD1A', 'DEFB1', 'CCDC144A', 'RGS9', 'DLK2', 'CACNA1I', 'GGT3P', 'CDKL2', 'MYO16', 'PWAR5', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'CABP4', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CHRNA10', 'TCEAL2', 'FKBP1AP1', 'UNC13A', 'AGBL4', 'SLC39A2', 'XCL2', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'ZNF727', 'LINC00202.1', 'KCNH3', 'ARL9', 'TM6SF2', 'MAK', 'SNORD116.4', 'TCN1', 'P2RY12', 'GRID2IP', 'MPL', 'HRCT1', 'PCBP3', 'SYCE3', 'TCTEX1D1', 'ELOVL3', 'GPM6A', 'CD70', 'NOX5', 'SLC46A2', 'SYCE2', 'GRIN2A', 'ARMC3', 'JAKMIP1', 'PGLYRP2', 'TIGD4', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'KLF3.AS1', 'SOSTDC1', 'ASIC3', 'LONRF3', 'LRRC43', 'AGAP7P', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'LOC400927', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'ACHE', 'CEACAM7', 'RIMS2', 'OLFM4', 'CTAGE11P', 'TMEM145', 'CD40LG', 'C6ORF52', 'HRC', 'BEGAIN', 'VN1R1', 'GPR82', 'CXADRP3', 'PAH', 'CHODL', 'TTBK1', 'LOC285593', 'MLLT4.AS1', 'CHST9', 'TTYH1', 'HIST1H2BH', 'APOBEC3A', 'GABRB3', 'ADGRL3', 'SLC25A34', 'BRSK2', 'TRH', 'MAPK4', 'CAMK4', 'DGCR5', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'EPYC', 'GBP6', 'MUC15', 'GPR63', 'CAPSL', 'SLC35F3', 'ANKLE1', 'IL17D', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'TNFSF11', 'RMRP', 'FAM201A', 'HAMP', 'MYO15A', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'PTX3', 'DCLK3', 'RHCE', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'ROPN1B', 'RUNDC3A', 'LOC100132215', 'CYP2E1', 'C1QL3', 'UCKL1.AS1', 'PNMA6A', 'LINC00961', 'CYTL1', 'FOLR1', 'RRN3P1', 'XCL1', 'SIGLEC6', 'LINC00689', 'RRN3P2', 'HBA1', 'ATP13A4', 'THSD7B', 'SLC2A14', 'ADRA2B', 'MT1L', 'ZMAT4', 'TMEM150B', 'IL1RL1', 'KISS1R', 'CCR10', 'KIF19', 'IL24', 'GLI1', 'GPR173', 'ARRDC3.AS1', 'DPEP1', 'LIN7A', 'TTLL9', 'PRRT4', 'NIPAL4', 'KIAA1210', 'GPR135', 'WBP2NL', 'A2ML1', 'RHBG', 'B3GALT5', 'PCDHB18P', 'GNMT', 'RRAD', 'CBLN1', 'FIGF', 'DPF3', 'LOC90246', 'OXGR1', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'MAP7D2', 'CACNA2D3', 'DPY19L2P4', 'MS4A8', 'SLC5A8', 'HIST1H1D', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PCDH20', 'GABRB2', 'DNAH11', 'TIFAB', 'PON3', 'KLK8', 'FOXN1', 'PHKG1', 'WFIKKN1', 'MASP2', 'CD19', 'GPR171', 'WNT10A', 'FREM2', 'LINC00669', 'ANK1', 'DCST2', 'C19ORF45', 'CRB2', 'CLCA2', 'KCNB1', 'SLC26A3', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'LINC01465', 'LINC00685', 'TYMSOS', 'RASAL1', 'CD1E', 'ANO2', 'RIC3', 'COLCA1', 'CST2', 'HNRNPCL3', 'NEURL3', 'LOC646999', 'MED12L', 'TTC41P', 'PCDHGC5', 'EYA1', 'STXBP6', 'RAB3B', 'CLPSL1', 'MYEOV', 'NRXN1', 'FAM182B', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'TDRD9', 'AJAP1', 'ZNF676', 'CR2', 'CLDN14', 'CXCR2', 'LPAR4', 'KIF4B', 'PATL2', 'FNDC8', 'CLEC4F', 'MSLN', 'KCNRG', 'MKX', 'ABHD1', 'C9ORF117', 'PDCD1', 'MAGEL2', 'NDP', 'VIT', 'HAPLN1', 'SEZ6L', 'DMRTC1B', 'POU3F1', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.219937747180309e-15 NRMSE: 8.558804422604178e-16 MAPE: 5.9919351775493295e-12 Pearson Correlation: 0.1012520968417881 Spearman Correlation: 0.12598283094332263 Coefficient of Determination: -1.0915245460829084 RMSE: 0.29586475000163415 NRMSE: 0.22645425599622976 MAPE: 918.7335204958913 Predictor: ElasticNet Pearson Correlation: 0.6324160966197283 Spearman Correlation: 0.6387912434435741 Coefficient of Determination: 0.3555586732327469 RMSE: 0.16761840858072188 NRMSE: 0.11759724461239399 MAPE: 494.7059653342761 Pearson Correlation: 0.4405519631478129 Spearman Correlation: 0.5000000000000001 Coefficient of Determination: 0.18340038780105394 RMSE: 0.18486995145267876 NRMSE: 0.14149907115343835 MAPE: 443.06045571087196 Predictor: RandomForests Pearson Correlation: 0.5437017048059649 Spearman Correlation: 0.5593451539293437 Coefficient of Determination: 0.24551589453636002 RMSE: 0.1813656634799313 NRMSE: 0.12724200446198244 MAPE: 433.184633256312 Pearson Correlation: 0.4635869512231812 Spearman Correlation: 0.50051214515657 Coefficient of Determination: 0.1860947390359302 RMSE: 0.18456471243170505 NRMSE: 0.14126544185020018 MAPE: 310.44597866161524 Protein: PTEN x_train_column_count: 1002 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'LINC01119', 'IQUB', 'NKPD1', 'LINC01341', 'SOX8', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'PPP1R3G', 'C19ORF18', 'FXYD1', 'RNF138P1', 'CCIN', 'MYCBPAP', 'ETV2', 'XPNPEP2', 'TEKT3', 'STKLD1', 'SLC30A8', 'UGT8', 'SLC28A3', 'CCR8', 'METTL7B', 'HEPACAM2', 'UBE2Q2P1', 'TEX14', 'PLP1', 'SLC25A18', 'JPH4', 'IDI2.AS1', 'CASQ1', 'S100A3', 'LINC00482', 'LRIT3', 'GLIS1', 'SGK2', 'CCDC36', 'NR1I3', 'ALOXE3', 'ZNF843', 'CACNG1', 'MS4A15', 'WNT2B', 'PBX4', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'LGALS2', 'PYGO1', 'TMEM92', 'FUT9', 'ADAMTS8', 'BCHE', 'AOC2', 'GJB1', 'C9ORF43', 'CCDC151', 'FCRL6', 'PNCK', 'PITX2', 'TNNI3K', 'FAM189A1', 'DQX1', 'LPAR3', 'CKMT2', 'ABCA17P', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'NLRP12', 'C1ORF101', 'CLDN9', 'IYD', 'ZNF835', 'SLC6A20', 'OTOA', 'CA3', 'SPIB', 'FAM95B1', 'FAM90A1', 'C1ORF95', 'C2CD4A', 'RYR2', 'PCDH9', 'CCDC158', 'CLEC3A', 'SCN2B', 'CLECL1', 'PCSK1N', 'ULBP3', 'SVOPL', 'LINC01550', 'GSDMC', 'ARC', 'TAS1R3', 'CCDC65', 'IL20RB', 'DDX11L2', 'VSIG1', 'AURKC', 'TTC16', 'ZCCHC18', 'PDE1C', 'ALDH8A1', 'COLCA2', 'PCYT1B', 'MYOZ1', 'BPIFB2', 'KNDC1', 'B3GALT5.AS1', 'DUOXA1', 'CRYGS', 'GSTM1', 'PPP1R36', 'KLHL4', 'LOC148709', 'LOC441455', 'CPEB1', 'OR7E91P', 'IL22RA1', 'HOXD3', 'TARP', 'FAM57B', 'LOC90768', 'CAMP', 'JPH3', 'LUZP2', 'FUT7', 'IL12RB2', 'PLA2G5', 'RIMS1', 'FLJ37201', 'LBX2', 'SCARA5', 'RELN', 'HOXB13', 'CD177', 'IGSF5', 'TUBB8', 'SLC22A18AS', 'HIST1H2BN', 'ZBED3.AS1', 'GPR18', 'ASTN1', 'ZC3H12D', 'KCNE1', 'MNX1', 'TCHH', 'CIDEA', 'ONECUT2', 'GAL', 'KCNE2', 'SP5', 'WDR72', 'BTBD8', 'CHRNA6', 'FAM135B', 'IRX4', 'C10ORF128', 'SLC16A10', 'RSPH4A', 'MGC16142', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'CCDC7', 'MGAT5B', 'YPEL4', 'GBP1P1', 'DCSTAMP', 'CELF5', 'CXXC4', 'GRIN2C', 'GPR3', 'SKIDA1', 'OBP2B', 'CXCR5', 'SLC35F1', 'PYDC1', 'SLC30A2', 'HOXA11', 'NIPAL1', 'ATP13A5', 'CCDC153', 'FOXJ1', 'STRC', 'SRL', 'WT1', 'PCSK9', 'PCAT18', 'TNFRSF9', 'LRP1B', 'RPGRIP1', 'INSM1', 'GPR174', 'CNNM1', 'PCK1', 'NOXO1', 'SLC18A2', 'C17ORF104', 'SLC25A53', 'FOXD4', 'DMRT3', 'PPP4R4', 'MARCO', 'GPX2', 'LBP', 'IL20', 'COL23A1', 'INHA', 'FOXD1', 'NOS2', 'PKNOX2', 'BTLA', 'TNFRSF17', 'CRISP3', 'ADH1C', 'KLHL14', 'AVPR2', 'CXCL2', 'GLOD5', 'MYBPC1', 'PARP15', 'GPLD1', 'PFN1P2', 'GPR55', 'CST9', 'SLCO4C1', 'STEAP1B', 'BCL2L14', 'SLC23A1', 'C2ORF40', 'DHRS4L1', 'SCN3A', 'AMH', 'CXCR2P1', 'ZNF98', 'VAT1L', 'ULBP2', 'VSIG2', 'ZNF454', 'RNF212', 'TPSG1', 'VGLL1', 'CYSLTR2', 'HAP1', 'P2RX1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'TMEM105', 'ORM1', 'FAM178B', 'DKK1', 'ZNF488', 'IL23A', 'DPY19L2P2', 'AMBP', 'PRKG2', 'CXCL1', 'SIGLEC17P', 'CRYM', 'SUCNR1', 'DEPDC4', 'SPDYE1', 'FABP7', 'LRRC2', 'GPBAR1', 'CTCFL', 'BRINP1', 'BDKRB1', 'LRGUK', 'XIRP1', 'ADAMTS18', 'VWDE', 'LINC00930', 'FUT6', 'RERGL', 'TENM1', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'KIAA0319', 'NUGGC', 'CECR2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'PKD1L1', 'SSUH2', 'WSCD2', 'CBLN2', 'ECEL1', 'SPESP1', 'SEC14L5', 'ABHD11.AS1', 'FSCN2', 'DMRT2', 'CCL17', 'ZNF732', 'FAM162B', 'PIANP', 'HOXD4', 'GNB3', 'TMEM217', 'CTSG', 'GRIA3', 'RSPO1', 'RGS6', 'SERPINA6', 'ADAMTS19', 'IL1R2', 'MT1A', 'RNF175', 'ADAM32', 'COL2A1', 'CHRNB2', 'FLJ12825', 'POM121L9P', 'PFKFB1', 'RASL10A', 'HECTD2.AS1', 'PRSS21', 'DIRC3', 'LRRC16B', 'CYP46A1', 'SMIM5', 'FOXC2', 'CAPN11', 'ZNF804A', 'IGF2BP3', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'CYSRT1', 'VIPR2', 'GPR87', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'SLC13A2', 'XKR9', 'CA9', 'HTR7', 'HOGA1', 'EMX1', 'WIPF3', 'CEP83.AS1', 'ZSCAN1', 'ZBTB16', 'CITED1', 'OTUD7A', 'TMEM40', 'CYP26A1', 'TMSB15A', 'WFDC3', 'MAPT.IT1', 'CDHR1', 'ANKK1', 'GZMM', 'ROPN1L', 'PVALB', 'FIRRE', 'M1AP', 'MYO3B', 'INE2', 'CRTAC1', 'MRAP2', 'IGSF22', 'RFX8', 'RBM12B.AS1', 'SPAG17', 'TTC23L', 'HEATR4', 'PYGM', 'MROH7', 'PCDHA12', 'CFAP61', 'BTC', 'KCNT2', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'B3GAT1', 'OPCML', 'SRSF12', 'NWD1', 'LRRC4B', 'CIDEC', 'CCBE1', 'ADGRF1', 'CLEC4E', 'MIA', 'LINC00173', 'TMEM59L', 'HPDL', 'TSPAN8', 'RNF182', 'FRMPD1', 'GALNT13', 'SMC1B', 'KCNA6', 'KLK6', 'LSAMP', 'LOC613037', 'ABCC6P2', 'FASLG', 'IL11', 'NLRP7', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'COL28A1', 'C15ORF56', 'FAM83A', 'PSORS1C1', 'ANO5', 'SLC16A11', 'PTCHD1', 'SLC6A14', 'SLC24A5', 'C9ORF47', 'ADGRG2', 'TMPRSS4', 'TUSC5', 'LINC00908', 'RUFY4', 'CYP4F12', 'INTS4P2', 'PIK3C2G', 'IGSF1', 'KCNQ3', 'LOC100133669', 'VENTX', 'MYOM2', 'FAM157A', 'NBPF4', 'EBF2', 'MAG', 'DSCAML1', 'PCDHA5', 'PTPRN', 'KLK7', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'SFTPA2', 'CNTN2', 'ZBTB20', 'FAM19A2', 'NKX3.2', 'DLX5', 'PLAC1', 'CCNI2', 'BRE.AS1', 'OR2W3', 'SLC6A17', 'RYR3', 'GHRLOS', 'ABCC2', 'PTPRR', 'ABCD2', 'TFAP2E', 'CD160', 'GRIA2', 'CD1A', 'DEFB1', 'CCDC144A', 'RGS9', 'DLK2', 'CACNA1I', 'GGT3P', 'CDKL2', 'MYO16', 'PWAR5', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'CABP4', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CHRNA10', 'TCEAL2', 'FKBP1AP1', 'UNC13A', 'AGBL4', 'SLC39A2', 'XCL2', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'ZNF727', 'LINC00202.1', 'KCNH3', 'ARL9', 'TM6SF2', 'MAK', 'SNORD116.4', 'TCN1', 'P2RY12', 'GRID2IP', 'MPL', 'HRCT1', 'PCBP3', 'SYCE3', 'TCTEX1D1', 'ELOVL3', 'GPM6A', 'CD70', 'NOX5', 'SLC46A2', 'SYCE2', 'GRIN2A', 'ARMC3', 'JAKMIP1', 'PGLYRP2', 'TIGD4', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'KLF3.AS1', 'SOSTDC1', 'ASIC3', 'LONRF3', 'LRRC43', 'AGAP7P', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'LOC400927', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'ACHE', 'CEACAM7', 'RIMS2', 'OLFM4', 'CTAGE11P', 'TMEM145', 'CD40LG', 'C6ORF52', 'HRC', 'BEGAIN', 'VN1R1', 'GPR82', 'CXADRP3', 'PAH', 'CHODL', 'TTBK1', 'LOC285593', 'MLLT4.AS1', 'CHST9', 'TTYH1', 'HIST1H2BH', 'APOBEC3A', 'GABRB3', 'ADGRL3', 'SLC25A34', 'BRSK2', 'TRH', 'MAPK4', 'CAMK4', 'DGCR5', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'EPYC', 'GBP6', 'MUC15', 'GPR63', 'CAPSL', 'SLC35F3', 'ANKLE1', 'IL17D', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'TNFSF11', 'RMRP', 'FAM201A', 'HAMP', 'MYO15A', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'PTX3', 'DCLK3', 'RHCE', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'ROPN1B', 'RUNDC3A', 'LOC100132215', 'CYP2E1', 'C1QL3', 'UCKL1.AS1', 'PNMA6A', 'LINC00961', 'CYTL1', 'FOLR1', 'RRN3P1', 'XCL1', 'SIGLEC6', 'LINC00689', 'RRN3P2', 'HBA1', 'ATP13A4', 'THSD7B', 'SLC2A14', 'ADRA2B', 'MT1L', 'ZMAT4', 'TMEM150B', 'IL1RL1', 'KISS1R', 'CCR10', 'KIF19', 'IL24', 'GLI1', 'GPR173', 'ARRDC3.AS1', 'DPEP1', 'LIN7A', 'TTLL9', 'PRRT4', 'NIPAL4', 'KIAA1210', 'GPR135', 'WBP2NL', 'A2ML1', 'RHBG', 'B3GALT5', 'PCDHB18P', 'GNMT', 'RRAD', 'CBLN1', 'FIGF', 'DPF3', 'LOC90246', 'OXGR1', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'MAP7D2', 'CACNA2D3', 'DPY19L2P4', 'MS4A8', 'SLC5A8', 'HIST1H1D', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PCDH20', 'GABRB2', 'DNAH11', 'TIFAB', 'PON3', 'KLK8', 'FOXN1', 'PHKG1', 'WFIKKN1', 'MASP2', 'CD19', 'GPR171', 'WNT10A', 'FREM2', 'LINC00669', 'ANK1', 'DCST2', 'C19ORF45', 'CRB2', 'CLCA2', 'KCNB1', 'SLC26A3', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'LINC01465', 'LINC00685', 'TYMSOS', 'RASAL1', 'CD1E', 'ANO2', 'RIC3', 'COLCA1', 'CST2', 'HNRNPCL3', 'NEURL3', 'LOC646999', 'MED12L', 'TTC41P', 'PCDHGC5', 'EYA1', 'STXBP6', 'RAB3B', 'CLPSL1', 'MYEOV', 'NRXN1', 'FAM182B', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'TDRD9', 'AJAP1', 'ZNF676', 'CR2', 'CLDN14', 'CXCR2', 'LPAR4', 'KIF4B', 'PATL2', 'FNDC8', 'CLEC4F', 'MSLN', 'KCNRG', 'MKX', 'ABHD1', 'C9ORF117', 'PDCD1', 'MAGEL2', 'NDP', 'VIT', 'HAPLN1', 'SEZ6L', 'DMRTC1B', 'POU3F1', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 3.5445791553763445e-15 NRMSE: 5.542301861271745e-16 MAPE: 6.9856793392242085e-12 Pearson Correlation: -0.02496370863123841 Spearman Correlation: -0.008525997463662083 Coefficient of Determination: -2.1000978085190667 RMSE: 0.874485123996875 NRMSE: 0.28820945356168837 MAPE: 537.3112006396394 Predictor: ElasticNet Pearson Correlation: 0.8615516326764419 Spearman Correlation: 0.8176451752989738 Coefficient of Determination: 0.6650869407652117 RMSE: 0.3625510591976149 NRMSE: 0.05668846207452347 MAPE: 372.1023544969989 Pearson Correlation: 0.08794347595808066 Spearman Correlation: 0.0973563554775144 Coefficient of Determination: -0.36262886344009404 RMSE: 0.5797670374357289 NRMSE: 0.1910773968214781 MAPE: 307.90710787169735 Predictor: RandomForests Pearson Correlation: 0.5328451149802149 Spearman Correlation: 0.5124173270839215 Coefficient of Determination: 0.17406229881433444 RMSE: 0.569346666769872 NRMSE: 0.08902301098739301 MAPE: 420.9024955947794 Pearson Correlation: 0.12498949344115774 Spearman Correlation: 0.17902643644522487 Coefficient of Determination: -0.005040813943609557 RMSE: 0.4979165676603581 NRMSE: 0.16410143288522774 MAPE: 171.10688484162202 Protein: BRCA2 x_train_column_count: 1002 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'LINC01119', 'IQUB', 'NKPD1', 'LINC01341', 'SOX8', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'PPP1R3G', 'C19ORF18', 'FXYD1', 'RNF138P1', 'CCIN', 'MYCBPAP', 'ETV2', 'XPNPEP2', 'TEKT3', 'STKLD1', 'SLC30A8', 'UGT8', 'SLC28A3', 'CCR8', 'METTL7B', 'HEPACAM2', 'UBE2Q2P1', 'TEX14', 'PLP1', 'SLC25A18', 'JPH4', 'IDI2.AS1', 'CASQ1', 'S100A3', 'LINC00482', 'LRIT3', 'GLIS1', 'SGK2', 'CCDC36', 'NR1I3', 'ALOXE3', 'ZNF843', 'CACNG1', 'MS4A15', 'WNT2B', 'PBX4', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'LGALS2', 'PYGO1', 'TMEM92', 'FUT9', 'ADAMTS8', 'BCHE', 'AOC2', 'GJB1', 'C9ORF43', 'CCDC151', 'FCRL6', 'PNCK', 'PITX2', 'TNNI3K', 'FAM189A1', 'DQX1', 'LPAR3', 'CKMT2', 'ABCA17P', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'NLRP12', 'C1ORF101', 'CLDN9', 'IYD', 'ZNF835', 'SLC6A20', 'OTOA', 'CA3', 'SPIB', 'FAM95B1', 'FAM90A1', 'C1ORF95', 'C2CD4A', 'RYR2', 'PCDH9', 'CCDC158', 'CLEC3A', 'SCN2B', 'CLECL1', 'PCSK1N', 'ULBP3', 'SVOPL', 'LINC01550', 'GSDMC', 'ARC', 'TAS1R3', 'CCDC65', 'IL20RB', 'DDX11L2', 'VSIG1', 'AURKC', 'TTC16', 'ZCCHC18', 'PDE1C', 'ALDH8A1', 'COLCA2', 'PCYT1B', 'MYOZ1', 'BPIFB2', 'KNDC1', 'B3GALT5.AS1', 'DUOXA1', 'CRYGS', 'GSTM1', 'PPP1R36', 'KLHL4', 'LOC148709', 'LOC441455', 'CPEB1', 'OR7E91P', 'IL22RA1', 'HOXD3', 'TARP', 'FAM57B', 'LOC90768', 'CAMP', 'JPH3', 'LUZP2', 'FUT7', 'IL12RB2', 'PLA2G5', 'RIMS1', 'FLJ37201', 'LBX2', 'SCARA5', 'RELN', 'HOXB13', 'CD177', 'IGSF5', 'TUBB8', 'SLC22A18AS', 'HIST1H2BN', 'ZBED3.AS1', 'GPR18', 'ASTN1', 'ZC3H12D', 'KCNE1', 'MNX1', 'TCHH', 'CIDEA', 'ONECUT2', 'GAL', 'KCNE2', 'SP5', 'WDR72', 'BTBD8', 'CHRNA6', 'FAM135B', 'IRX4', 'C10ORF128', 'SLC16A10', 'RSPH4A', 'MGC16142', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'CCDC7', 'MGAT5B', 'YPEL4', 'GBP1P1', 'DCSTAMP', 'CELF5', 'CXXC4', 'GRIN2C', 'GPR3', 'SKIDA1', 'OBP2B', 'CXCR5', 'SLC35F1', 'PYDC1', 'SLC30A2', 'HOXA11', 'NIPAL1', 'ATP13A5', 'CCDC153', 'FOXJ1', 'STRC', 'SRL', 'WT1', 'PCSK9', 'PCAT18', 'TNFRSF9', 'LRP1B', 'RPGRIP1', 'INSM1', 'GPR174', 'CNNM1', 'PCK1', 'NOXO1', 'SLC18A2', 'C17ORF104', 'SLC25A53', 'FOXD4', 'DMRT3', 'PPP4R4', 'MARCO', 'GPX2', 'LBP', 'IL20', 'COL23A1', 'INHA', 'FOXD1', 'NOS2', 'PKNOX2', 'BTLA', 'TNFRSF17', 'CRISP3', 'ADH1C', 'KLHL14', 'AVPR2', 'CXCL2', 'GLOD5', 'MYBPC1', 'PARP15', 'GPLD1', 'PFN1P2', 'GPR55', 'CST9', 'SLCO4C1', 'STEAP1B', 'BCL2L14', 'SLC23A1', 'C2ORF40', 'DHRS4L1', 'SCN3A', 'AMH', 'CXCR2P1', 'ZNF98', 'VAT1L', 'ULBP2', 'VSIG2', 'ZNF454', 'RNF212', 'TPSG1', 'VGLL1', 'CYSLTR2', 'HAP1', 'P2RX1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'TMEM105', 'ORM1', 'FAM178B', 'DKK1', 'ZNF488', 'IL23A', 'DPY19L2P2', 'AMBP', 'PRKG2', 'CXCL1', 'SIGLEC17P', 'CRYM', 'SUCNR1', 'DEPDC4', 'SPDYE1', 'FABP7', 'LRRC2', 'GPBAR1', 'CTCFL', 'BRINP1', 'BDKRB1', 'LRGUK', 'XIRP1', 'ADAMTS18', 'VWDE', 'LINC00930', 'FUT6', 'RERGL', 'TENM1', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'KIAA0319', 'NUGGC', 'CECR2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'PKD1L1', 'SSUH2', 'WSCD2', 'CBLN2', 'ECEL1', 'SPESP1', 'SEC14L5', 'ABHD11.AS1', 'FSCN2', 'DMRT2', 'CCL17', 'ZNF732', 'FAM162B', 'PIANP', 'HOXD4', 'GNB3', 'TMEM217', 'CTSG', 'GRIA3', 'RSPO1', 'RGS6', 'SERPINA6', 'ADAMTS19', 'IL1R2', 'MT1A', 'RNF175', 'ADAM32', 'COL2A1', 'CHRNB2', 'FLJ12825', 'POM121L9P', 'PFKFB1', 'RASL10A', 'HECTD2.AS1', 'PRSS21', 'DIRC3', 'LRRC16B', 'CYP46A1', 'SMIM5', 'FOXC2', 'CAPN11', 'ZNF804A', 'IGF2BP3', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'CYSRT1', 'VIPR2', 'GPR87', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'SLC13A2', 'XKR9', 'CA9', 'HTR7', 'HOGA1', 'EMX1', 'WIPF3', 'CEP83.AS1', 'ZSCAN1', 'ZBTB16', 'CITED1', 'OTUD7A', 'TMEM40', 'CYP26A1', 'TMSB15A', 'WFDC3', 'MAPT.IT1', 'CDHR1', 'ANKK1', 'GZMM', 'ROPN1L', 'PVALB', 'FIRRE', 'M1AP', 'MYO3B', 'INE2', 'CRTAC1', 'MRAP2', 'IGSF22', 'RFX8', 'RBM12B.AS1', 'SPAG17', 'TTC23L', 'HEATR4', 'PYGM', 'MROH7', 'PCDHA12', 'CFAP61', 'BTC', 'KCNT2', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'B3GAT1', 'OPCML', 'SRSF12', 'NWD1', 'LRRC4B', 'CIDEC', 'CCBE1', 'ADGRF1', 'CLEC4E', 'MIA', 'LINC00173', 'TMEM59L', 'HPDL', 'TSPAN8', 'RNF182', 'FRMPD1', 'GALNT13', 'SMC1B', 'KCNA6', 'KLK6', 'LSAMP', 'LOC613037', 'ABCC6P2', 'FASLG', 'IL11', 'NLRP7', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'COL28A1', 'C15ORF56', 'FAM83A', 'PSORS1C1', 'ANO5', 'SLC16A11', 'PTCHD1', 'SLC6A14', 'SLC24A5', 'C9ORF47', 'ADGRG2', 'TMPRSS4', 'TUSC5', 'LINC00908', 'RUFY4', 'CYP4F12', 'INTS4P2', 'PIK3C2G', 'IGSF1', 'KCNQ3', 'LOC100133669', 'VENTX', 'MYOM2', 'FAM157A', 'NBPF4', 'EBF2', 'MAG', 'DSCAML1', 'PCDHA5', 'PTPRN', 'KLK7', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'SFTPA2', 'CNTN2', 'ZBTB20', 'FAM19A2', 'NKX3.2', 'DLX5', 'PLAC1', 'CCNI2', 'BRE.AS1', 'OR2W3', 'SLC6A17', 'RYR3', 'GHRLOS', 'ABCC2', 'PTPRR', 'ABCD2', 'TFAP2E', 'CD160', 'GRIA2', 'CD1A', 'DEFB1', 'CCDC144A', 'RGS9', 'DLK2', 'CACNA1I', 'GGT3P', 'CDKL2', 'MYO16', 'PWAR5', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'CABP4', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CHRNA10', 'TCEAL2', 'FKBP1AP1', 'UNC13A', 'AGBL4', 'SLC39A2', 'XCL2', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'ZNF727', 'LINC00202.1', 'KCNH3', 'ARL9', 'TM6SF2', 'MAK', 'SNORD116.4', 'TCN1', 'P2RY12', 'GRID2IP', 'MPL', 'HRCT1', 'PCBP3', 'SYCE3', 'TCTEX1D1', 'ELOVL3', 'GPM6A', 'CD70', 'NOX5', 'SLC46A2', 'SYCE2', 'GRIN2A', 'ARMC3', 'JAKMIP1', 'PGLYRP2', 'TIGD4', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'KLF3.AS1', 'SOSTDC1', 'ASIC3', 'LONRF3', 'LRRC43', 'AGAP7P', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'LOC400927', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'ACHE', 'CEACAM7', 'RIMS2', 'OLFM4', 'CTAGE11P', 'TMEM145', 'CD40LG', 'C6ORF52', 'HRC', 'BEGAIN', 'VN1R1', 'GPR82', 'CXADRP3', 'PAH', 'CHODL', 'TTBK1', 'LOC285593', 'MLLT4.AS1', 'CHST9', 'TTYH1', 'HIST1H2BH', 'APOBEC3A', 'GABRB3', 'ADGRL3', 'SLC25A34', 'BRSK2', 'TRH', 'MAPK4', 'CAMK4', 'DGCR5', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'EPYC', 'GBP6', 'MUC15', 'GPR63', 'CAPSL', 'SLC35F3', 'ANKLE1', 'IL17D', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'TNFSF11', 'RMRP', 'FAM201A', 'HAMP', 'MYO15A', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'PTX3', 'DCLK3', 'RHCE', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'ROPN1B', 'RUNDC3A', 'LOC100132215', 'CYP2E1', 'C1QL3', 'UCKL1.AS1', 'PNMA6A', 'LINC00961', 'CYTL1', 'FOLR1', 'RRN3P1', 'XCL1', 'SIGLEC6', 'LINC00689', 'RRN3P2', 'HBA1', 'ATP13A4', 'THSD7B', 'SLC2A14', 'ADRA2B', 'MT1L', 'ZMAT4', 'TMEM150B', 'IL1RL1', 'KISS1R', 'CCR10', 'KIF19', 'IL24', 'GLI1', 'GPR173', 'ARRDC3.AS1', 'DPEP1', 'LIN7A', 'TTLL9', 'PRRT4', 'NIPAL4', 'KIAA1210', 'GPR135', 'WBP2NL', 'A2ML1', 'RHBG', 'B3GALT5', 'PCDHB18P', 'GNMT', 'RRAD', 'CBLN1', 'FIGF', 'DPF3', 'LOC90246', 'OXGR1', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'MAP7D2', 'CACNA2D3', 'DPY19L2P4', 'MS4A8', 'SLC5A8', 'HIST1H1D', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PCDH20', 'GABRB2', 'DNAH11', 'TIFAB', 'PON3', 'KLK8', 'FOXN1', 'PHKG1', 'WFIKKN1', 'MASP2', 'CD19', 'GPR171', 'WNT10A', 'FREM2', 'LINC00669', 'ANK1', 'DCST2', 'C19ORF45', 'CRB2', 'CLCA2', 'KCNB1', 'SLC26A3', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'LINC01465', 'LINC00685', 'TYMSOS', 'RASAL1', 'CD1E', 'ANO2', 'RIC3', 'COLCA1', 'CST2', 'HNRNPCL3', 'NEURL3', 'LOC646999', 'MED12L', 'TTC41P', 'PCDHGC5', 'EYA1', 'STXBP6', 'RAB3B', 'CLPSL1', 'MYEOV', 'NRXN1', 'FAM182B', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'TDRD9', 'AJAP1', 'ZNF676', 'CR2', 'CLDN14', 'CXCR2', 'LPAR4', 'KIF4B', 'PATL2', 'FNDC8', 'CLEC4F', 'MSLN', 'KCNRG', 'MKX', 'ABHD1', 'C9ORF117', 'PDCD1', 'MAGEL2', 'NDP', 'VIT', 'HAPLN1', 'SEZ6L', 'DMRTC1B', 'POU3F1', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999031343205 Coefficient of Determination: 1.0 RMSE: 1.3322713709444598e-15 NRMSE: 8.618318417867464e-16 MAPE: 3.926041435743059e-12 Pearson Correlation: 0.06406831627542263 Spearman Correlation: 0.05432891221459533 Coefficient of Determination: -1.512660544506443 RMSE: 0.29282982762402 NRMSE: 0.29306427904725785 MAPE: 449.2947406695912 Predictor: ElasticNet Pearson Correlation: 0.5970245401896764 Spearman Correlation: 0.5668370605085278 Coefficient of Determination: 0.27088775832790013 RMSE: 0.16873641176820095 NRMSE: 0.1091537472786675 MAPE: 197.18690355693326 Pearson Correlation: 0.3358136603323473 Spearman Correlation: 0.32431021889378675 Coefficient of Determination: 0.09665897897836695 RMSE: 0.17557968591321624 NRMSE: 0.17572026212291458 MAPE: 125.28185872784181 Predictor: RandomForests Pearson Correlation: 0.5534601681887167 Spearman Correlation: 0.5337480140355302 Coefficient of Determination: 0.16194881941451422 RMSE: 0.18090346508443683 NRMSE: 0.11702448157299938 MAPE: 163.47751630137276 Pearson Correlation: 0.25799173065272984 Spearman Correlation: 0.25895310085998774 Coefficient of Determination: 0.053854786257907517 RMSE: 0.17969140320964405 NRMSE: 0.17983527142678551 MAPE: 114.71277613965523 Protein: CDKN2A x_train_column_count: 1002 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'LINC01119', 'IQUB', 'NKPD1', 'LINC01341', 'SOX8', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'PPP1R3G', 'C19ORF18', 'FXYD1', 'RNF138P1', 'CCIN', 'MYCBPAP', 'ETV2', 'XPNPEP2', 'TEKT3', 'STKLD1', 'SLC30A8', 'UGT8', 'SLC28A3', 'CCR8', 'METTL7B', 'HEPACAM2', 'UBE2Q2P1', 'TEX14', 'PLP1', 'SLC25A18', 'JPH4', 'IDI2.AS1', 'CASQ1', 'S100A3', 'LINC00482', 'LRIT3', 'GLIS1', 'SGK2', 'CCDC36', 'NR1I3', 'ALOXE3', 'ZNF843', 'CACNG1', 'MS4A15', 'WNT2B', 'PBX4', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'LGALS2', 'PYGO1', 'TMEM92', 'FUT9', 'ADAMTS8', 'BCHE', 'AOC2', 'GJB1', 'C9ORF43', 'CCDC151', 'FCRL6', 'PNCK', 'PITX2', 'TNNI3K', 'FAM189A1', 'DQX1', 'LPAR3', 'CKMT2', 'ABCA17P', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'NLRP12', 'C1ORF101', 'CLDN9', 'IYD', 'ZNF835', 'SLC6A20', 'OTOA', 'CA3', 'SPIB', 'FAM95B1', 'FAM90A1', 'C1ORF95', 'C2CD4A', 'RYR2', 'PCDH9', 'CCDC158', 'CLEC3A', 'SCN2B', 'CLECL1', 'PCSK1N', 'ULBP3', 'SVOPL', 'LINC01550', 'GSDMC', 'ARC', 'TAS1R3', 'CCDC65', 'IL20RB', 'DDX11L2', 'VSIG1', 'AURKC', 'TTC16', 'ZCCHC18', 'PDE1C', 'ALDH8A1', 'COLCA2', 'PCYT1B', 'MYOZ1', 'BPIFB2', 'KNDC1', 'B3GALT5.AS1', 'DUOXA1', 'CRYGS', 'GSTM1', 'PPP1R36', 'KLHL4', 'LOC148709', 'LOC441455', 'CPEB1', 'OR7E91P', 'IL22RA1', 'HOXD3', 'TARP', 'FAM57B', 'LOC90768', 'CAMP', 'JPH3', 'LUZP2', 'FUT7', 'IL12RB2', 'PLA2G5', 'RIMS1', 'FLJ37201', 'LBX2', 'SCARA5', 'RELN', 'HOXB13', 'CD177', 'IGSF5', 'TUBB8', 'SLC22A18AS', 'HIST1H2BN', 'ZBED3.AS1', 'GPR18', 'ASTN1', 'ZC3H12D', 'KCNE1', 'MNX1', 'TCHH', 'CIDEA', 'ONECUT2', 'GAL', 'KCNE2', 'SP5', 'WDR72', 'BTBD8', 'CHRNA6', 'FAM135B', 'IRX4', 'C10ORF128', 'SLC16A10', 'RSPH4A', 'MGC16142', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'CCDC7', 'MGAT5B', 'YPEL4', 'GBP1P1', 'DCSTAMP', 'CELF5', 'CXXC4', 'GRIN2C', 'GPR3', 'SKIDA1', 'OBP2B', 'CXCR5', 'SLC35F1', 'PYDC1', 'SLC30A2', 'HOXA11', 'NIPAL1', 'ATP13A5', 'CCDC153', 'FOXJ1', 'STRC', 'SRL', 'WT1', 'PCSK9', 'PCAT18', 'TNFRSF9', 'LRP1B', 'RPGRIP1', 'INSM1', 'GPR174', 'CNNM1', 'PCK1', 'NOXO1', 'SLC18A2', 'C17ORF104', 'SLC25A53', 'FOXD4', 'DMRT3', 'PPP4R4', 'MARCO', 'GPX2', 'LBP', 'IL20', 'COL23A1', 'INHA', 'FOXD1', 'NOS2', 'PKNOX2', 'BTLA', 'TNFRSF17', 'CRISP3', 'ADH1C', 'KLHL14', 'AVPR2', 'CXCL2', 'GLOD5', 'MYBPC1', 'PARP15', 'GPLD1', 'PFN1P2', 'GPR55', 'CST9', 'SLCO4C1', 'STEAP1B', 'BCL2L14', 'SLC23A1', 'C2ORF40', 'DHRS4L1', 'SCN3A', 'AMH', 'CXCR2P1', 'ZNF98', 'VAT1L', 'ULBP2', 'VSIG2', 'ZNF454', 'RNF212', 'TPSG1', 'VGLL1', 'CYSLTR2', 'HAP1', 'P2RX1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'TMEM105', 'ORM1', 'FAM178B', 'DKK1', 'ZNF488', 'IL23A', 'DPY19L2P2', 'AMBP', 'PRKG2', 'CXCL1', 'SIGLEC17P', 'CRYM', 'SUCNR1', 'DEPDC4', 'SPDYE1', 'FABP7', 'LRRC2', 'GPBAR1', 'CTCFL', 'BRINP1', 'BDKRB1', 'LRGUK', 'XIRP1', 'ADAMTS18', 'VWDE', 'LINC00930', 'FUT6', 'RERGL', 'TENM1', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'KIAA0319', 'NUGGC', 'CECR2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'PKD1L1', 'SSUH2', 'WSCD2', 'CBLN2', 'ECEL1', 'SPESP1', 'SEC14L5', 'ABHD11.AS1', 'FSCN2', 'DMRT2', 'CCL17', 'ZNF732', 'FAM162B', 'PIANP', 'HOXD4', 'GNB3', 'TMEM217', 'CTSG', 'GRIA3', 'RSPO1', 'RGS6', 'SERPINA6', 'ADAMTS19', 'IL1R2', 'MT1A', 'RNF175', 'ADAM32', 'COL2A1', 'CHRNB2', 'FLJ12825', 'POM121L9P', 'PFKFB1', 'RASL10A', 'HECTD2.AS1', 'PRSS21', 'DIRC3', 'LRRC16B', 'CYP46A1', 'SMIM5', 'FOXC2', 'CAPN11', 'ZNF804A', 'IGF2BP3', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'CYSRT1', 'VIPR2', 'GPR87', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'SLC13A2', 'XKR9', 'CA9', 'HTR7', 'HOGA1', 'EMX1', 'WIPF3', 'CEP83.AS1', 'ZSCAN1', 'ZBTB16', 'CITED1', 'OTUD7A', 'TMEM40', 'CYP26A1', 'TMSB15A', 'WFDC3', 'MAPT.IT1', 'CDHR1', 'ANKK1', 'GZMM', 'ROPN1L', 'PVALB', 'FIRRE', 'M1AP', 'MYO3B', 'INE2', 'CRTAC1', 'MRAP2', 'IGSF22', 'RFX8', 'RBM12B.AS1', 'SPAG17', 'TTC23L', 'HEATR4', 'PYGM', 'MROH7', 'PCDHA12', 'CFAP61', 'BTC', 'KCNT2', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'B3GAT1', 'OPCML', 'SRSF12', 'NWD1', 'LRRC4B', 'CIDEC', 'CCBE1', 'ADGRF1', 'CLEC4E', 'MIA', 'LINC00173', 'TMEM59L', 'HPDL', 'TSPAN8', 'RNF182', 'FRMPD1', 'GALNT13', 'SMC1B', 'KCNA6', 'KLK6', 'LSAMP', 'LOC613037', 'ABCC6P2', 'FASLG', 'IL11', 'NLRP7', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'COL28A1', 'C15ORF56', 'FAM83A', 'PSORS1C1', 'ANO5', 'SLC16A11', 'PTCHD1', 'SLC6A14', 'SLC24A5', 'C9ORF47', 'ADGRG2', 'TMPRSS4', 'TUSC5', 'LINC00908', 'RUFY4', 'CYP4F12', 'INTS4P2', 'PIK3C2G', 'IGSF1', 'KCNQ3', 'LOC100133669', 'VENTX', 'MYOM2', 'FAM157A', 'NBPF4', 'EBF2', 'MAG', 'DSCAML1', 'PCDHA5', 'PTPRN', 'KLK7', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'SFTPA2', 'CNTN2', 'ZBTB20', 'FAM19A2', 'NKX3.2', 'DLX5', 'PLAC1', 'CCNI2', 'BRE.AS1', 'OR2W3', 'SLC6A17', 'RYR3', 'GHRLOS', 'ABCC2', 'PTPRR', 'ABCD2', 'TFAP2E', 'CD160', 'GRIA2', 'CD1A', 'DEFB1', 'CCDC144A', 'RGS9', 'DLK2', 'CACNA1I', 'GGT3P', 'CDKL2', 'MYO16', 'PWAR5', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'CABP4', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CHRNA10', 'TCEAL2', 'FKBP1AP1', 'UNC13A', 'AGBL4', 'SLC39A2', 'XCL2', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'ZNF727', 'LINC00202.1', 'KCNH3', 'ARL9', 'TM6SF2', 'MAK', 'SNORD116.4', 'TCN1', 'P2RY12', 'GRID2IP', 'MPL', 'HRCT1', 'PCBP3', 'SYCE3', 'TCTEX1D1', 'ELOVL3', 'GPM6A', 'CD70', 'NOX5', 'SLC46A2', 'SYCE2', 'GRIN2A', 'ARMC3', 'JAKMIP1', 'PGLYRP2', 'TIGD4', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'KLF3.AS1', 'SOSTDC1', 'ASIC3', 'LONRF3', 'LRRC43', 'AGAP7P', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'LOC400927', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'ACHE', 'CEACAM7', 'RIMS2', 'OLFM4', 'CTAGE11P', 'TMEM145', 'CD40LG', 'C6ORF52', 'HRC', 'BEGAIN', 'VN1R1', 'GPR82', 'CXADRP3', 'PAH', 'CHODL', 'TTBK1', 'LOC285593', 'MLLT4.AS1', 'CHST9', 'TTYH1', 'HIST1H2BH', 'APOBEC3A', 'GABRB3', 'ADGRL3', 'SLC25A34', 'BRSK2', 'TRH', 'MAPK4', 'CAMK4', 'DGCR5', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'EPYC', 'GBP6', 'MUC15', 'GPR63', 'CAPSL', 'SLC35F3', 'ANKLE1', 'IL17D', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'TNFSF11', 'RMRP', 'FAM201A', 'HAMP', 'MYO15A', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'PTX3', 'DCLK3', 'RHCE', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'ROPN1B', 'RUNDC3A', 'LOC100132215', 'CYP2E1', 'C1QL3', 'UCKL1.AS1', 'PNMA6A', 'LINC00961', 'CYTL1', 'FOLR1', 'RRN3P1', 'XCL1', 'SIGLEC6', 'LINC00689', 'RRN3P2', 'HBA1', 'ATP13A4', 'THSD7B', 'SLC2A14', 'ADRA2B', 'MT1L', 'ZMAT4', 'TMEM150B', 'IL1RL1', 'KISS1R', 'CCR10', 'KIF19', 'IL24', 'GLI1', 'GPR173', 'ARRDC3.AS1', 'DPEP1', 'LIN7A', 'TTLL9', 'PRRT4', 'NIPAL4', 'KIAA1210', 'GPR135', 'WBP2NL', 'A2ML1', 'RHBG', 'B3GALT5', 'PCDHB18P', 'GNMT', 'RRAD', 'CBLN1', 'FIGF', 'DPF3', 'LOC90246', 'OXGR1', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'MAP7D2', 'CACNA2D3', 'DPY19L2P4', 'MS4A8', 'SLC5A8', 'HIST1H1D', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PCDH20', 'GABRB2', 'DNAH11', 'TIFAB', 'PON3', 'KLK8', 'FOXN1', 'PHKG1', 'WFIKKN1', 'MASP2', 'CD19', 'GPR171', 'WNT10A', 'FREM2', 'LINC00669', 'ANK1', 'DCST2', 'C19ORF45', 'CRB2', 'CLCA2', 'KCNB1', 'SLC26A3', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'LINC01465', 'LINC00685', 'TYMSOS', 'RASAL1', 'CD1E', 'ANO2', 'RIC3', 'COLCA1', 'CST2', 'HNRNPCL3', 'NEURL3', 'LOC646999', 'MED12L', 'TTC41P', 'PCDHGC5', 'EYA1', 'STXBP6', 'RAB3B', 'CLPSL1', 'MYEOV', 'NRXN1', 'FAM182B', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'TDRD9', 'AJAP1', 'ZNF676', 'CR2', 'CLDN14', 'CXCR2', 'LPAR4', 'KIF4B', 'PATL2', 'FNDC8', 'CLEC4F', 'MSLN', 'KCNRG', 'MKX', 'ABHD1', 'C9ORF117', 'PDCD1', 'MAGEL2', 'NDP', 'VIT', 'HAPLN1', 'SEZ6L', 'DMRTC1B', 'POU3F1', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 4.431134433077816e-15 NRMSE: 1.0017258806550955e-15 MAPE: 3.0734937038469502e-12 Pearson Correlation: 0.3977544451183132 Spearman Correlation: 0.3855087308555264 Coefficient of Determination: -0.24899532881867503 RMSE: 0.8346847111200011 NRMSE: 0.2254076994652987 MAPE: 1890.3738887504805 Predictor: ElasticNet Pearson Correlation: 0.8675189259258507 Spearman Correlation: 0.8563844099653006 Coefficient of Determination: 0.6860772151089265 RMSE: 0.3601054360638421 NRMSE: 0.0814073552761031 MAPE: 148.4422320638298 Pearson Correlation: 0.5847347438109651 Spearman Correlation: 0.5223246512535363 Coefficient of Determination: 0.3270529329055649 RMSE: 0.612678307399945 NRMSE: 0.1654545793680651 MAPE: 1115.980174786512 Predictor: RandomForests Pearson Correlation: 0.5576605566350309 Spearman Correlation: 0.5083573865338228 Coefficient of Determination: 0.2389346482693816 RMSE: 0.5606982925061706 NRMSE: 0.12675444614132939 MAPE: 167.3574046789127 Pearson Correlation: 0.5563647971880801 Spearman Correlation: 0.40860891620329726 Coefficient of Determination: 0.20015889425363798 RMSE: 0.6679499342787053 NRMSE: 0.18038075459862418 MAPE: 576.8086243320224 Protein: TP53 x_train_column_count: 1002 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'LINC01119', 'IQUB', 'NKPD1', 'LINC01341', 'SOX8', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'PPP1R3G', 'C19ORF18', 'FXYD1', 'RNF138P1', 'CCIN', 'MYCBPAP', 'ETV2', 'XPNPEP2', 'TEKT3', 'STKLD1', 'SLC30A8', 'UGT8', 'SLC28A3', 'CCR8', 'METTL7B', 'HEPACAM2', 'UBE2Q2P1', 'TEX14', 'PLP1', 'SLC25A18', 'JPH4', 'IDI2.AS1', 'CASQ1', 'S100A3', 'LINC00482', 'LRIT3', 'GLIS1', 'SGK2', 'CCDC36', 'NR1I3', 'ALOXE3', 'ZNF843', 'CACNG1', 'MS4A15', 'WNT2B', 'PBX4', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'LGALS2', 'PYGO1', 'TMEM92', 'FUT9', 'ADAMTS8', 'BCHE', 'AOC2', 'GJB1', 'C9ORF43', 'CCDC151', 'FCRL6', 'PNCK', 'PITX2', 'TNNI3K', 'FAM189A1', 'DQX1', 'LPAR3', 'CKMT2', 'ABCA17P', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'NLRP12', 'C1ORF101', 'CLDN9', 'IYD', 'ZNF835', 'SLC6A20', 'OTOA', 'CA3', 'SPIB', 'FAM95B1', 'FAM90A1', 'C1ORF95', 'C2CD4A', 'RYR2', 'PCDH9', 'CCDC158', 'CLEC3A', 'SCN2B', 'CLECL1', 'PCSK1N', 'ULBP3', 'SVOPL', 'LINC01550', 'GSDMC', 'ARC', 'TAS1R3', 'CCDC65', 'IL20RB', 'DDX11L2', 'VSIG1', 'AURKC', 'TTC16', 'ZCCHC18', 'PDE1C', 'ALDH8A1', 'COLCA2', 'PCYT1B', 'MYOZ1', 'BPIFB2', 'KNDC1', 'B3GALT5.AS1', 'DUOXA1', 'CRYGS', 'GSTM1', 'PPP1R36', 'KLHL4', 'LOC148709', 'LOC441455', 'CPEB1', 'OR7E91P', 'IL22RA1', 'HOXD3', 'TARP', 'FAM57B', 'LOC90768', 'CAMP', 'JPH3', 'LUZP2', 'FUT7', 'IL12RB2', 'PLA2G5', 'RIMS1', 'FLJ37201', 'LBX2', 'SCARA5', 'RELN', 'HOXB13', 'CD177', 'IGSF5', 'TUBB8', 'SLC22A18AS', 'HIST1H2BN', 'ZBED3.AS1', 'GPR18', 'ASTN1', 'ZC3H12D', 'KCNE1', 'MNX1', 'TCHH', 'CIDEA', 'ONECUT2', 'GAL', 'KCNE2', 'SP5', 'WDR72', 'BTBD8', 'CHRNA6', 'FAM135B', 'IRX4', 'C10ORF128', 'SLC16A10', 'RSPH4A', 'MGC16142', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'CCDC7', 'MGAT5B', 'YPEL4', 'GBP1P1', 'DCSTAMP', 'CELF5', 'CXXC4', 'GRIN2C', 'GPR3', 'SKIDA1', 'OBP2B', 'CXCR5', 'SLC35F1', 'PYDC1', 'SLC30A2', 'HOXA11', 'NIPAL1', 'ATP13A5', 'CCDC153', 'FOXJ1', 'STRC', 'SRL', 'WT1', 'PCSK9', 'PCAT18', 'TNFRSF9', 'LRP1B', 'RPGRIP1', 'INSM1', 'GPR174', 'CNNM1', 'PCK1', 'NOXO1', 'SLC18A2', 'C17ORF104', 'SLC25A53', 'FOXD4', 'DMRT3', 'PPP4R4', 'MARCO', 'GPX2', 'LBP', 'IL20', 'COL23A1', 'INHA', 'FOXD1', 'NOS2', 'PKNOX2', 'BTLA', 'TNFRSF17', 'CRISP3', 'ADH1C', 'KLHL14', 'AVPR2', 'CXCL2', 'GLOD5', 'MYBPC1', 'PARP15', 'GPLD1', 'PFN1P2', 'GPR55', 'CST9', 'SLCO4C1', 'STEAP1B', 'BCL2L14', 'SLC23A1', 'C2ORF40', 'DHRS4L1', 'SCN3A', 'AMH', 'CXCR2P1', 'ZNF98', 'VAT1L', 'ULBP2', 'VSIG2', 'ZNF454', 'RNF212', 'TPSG1', 'VGLL1', 'CYSLTR2', 'HAP1', 'P2RX1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'TMEM105', 'ORM1', 'FAM178B', 'DKK1', 'ZNF488', 'IL23A', 'DPY19L2P2', 'AMBP', 'PRKG2', 'CXCL1', 'SIGLEC17P', 'CRYM', 'SUCNR1', 'DEPDC4', 'SPDYE1', 'FABP7', 'LRRC2', 'GPBAR1', 'CTCFL', 'BRINP1', 'BDKRB1', 'LRGUK', 'XIRP1', 'ADAMTS18', 'VWDE', 'LINC00930', 'FUT6', 'RERGL', 'TENM1', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'KIAA0319', 'NUGGC', 'CECR2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'PKD1L1', 'SSUH2', 'WSCD2', 'CBLN2', 'ECEL1', 'SPESP1', 'SEC14L5', 'ABHD11.AS1', 'FSCN2', 'DMRT2', 'CCL17', 'ZNF732', 'FAM162B', 'PIANP', 'HOXD4', 'GNB3', 'TMEM217', 'CTSG', 'GRIA3', 'RSPO1', 'RGS6', 'SERPINA6', 'ADAMTS19', 'IL1R2', 'MT1A', 'RNF175', 'ADAM32', 'COL2A1', 'CHRNB2', 'FLJ12825', 'POM121L9P', 'PFKFB1', 'RASL10A', 'HECTD2.AS1', 'PRSS21', 'DIRC3', 'LRRC16B', 'CYP46A1', 'SMIM5', 'FOXC2', 'CAPN11', 'ZNF804A', 'IGF2BP3', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'CYSRT1', 'VIPR2', 'GPR87', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'SLC13A2', 'XKR9', 'CA9', 'HTR7', 'HOGA1', 'EMX1', 'WIPF3', 'CEP83.AS1', 'ZSCAN1', 'ZBTB16', 'CITED1', 'OTUD7A', 'TMEM40', 'CYP26A1', 'TMSB15A', 'WFDC3', 'MAPT.IT1', 'CDHR1', 'ANKK1', 'GZMM', 'ROPN1L', 'PVALB', 'FIRRE', 'M1AP', 'MYO3B', 'INE2', 'CRTAC1', 'MRAP2', 'IGSF22', 'RFX8', 'RBM12B.AS1', 'SPAG17', 'TTC23L', 'HEATR4', 'PYGM', 'MROH7', 'PCDHA12', 'CFAP61', 'BTC', 'KCNT2', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'B3GAT1', 'OPCML', 'SRSF12', 'NWD1', 'LRRC4B', 'CIDEC', 'CCBE1', 'ADGRF1', 'CLEC4E', 'MIA', 'LINC00173', 'TMEM59L', 'HPDL', 'TSPAN8', 'RNF182', 'FRMPD1', 'GALNT13', 'SMC1B', 'KCNA6', 'KLK6', 'LSAMP', 'LOC613037', 'ABCC6P2', 'FASLG', 'IL11', 'NLRP7', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'COL28A1', 'C15ORF56', 'FAM83A', 'PSORS1C1', 'ANO5', 'SLC16A11', 'PTCHD1', 'SLC6A14', 'SLC24A5', 'C9ORF47', 'ADGRG2', 'TMPRSS4', 'TUSC5', 'LINC00908', 'RUFY4', 'CYP4F12', 'INTS4P2', 'PIK3C2G', 'IGSF1', 'KCNQ3', 'LOC100133669', 'VENTX', 'MYOM2', 'FAM157A', 'NBPF4', 'EBF2', 'MAG', 'DSCAML1', 'PCDHA5', 'PTPRN', 'KLK7', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'SFTPA2', 'CNTN2', 'ZBTB20', 'FAM19A2', 'NKX3.2', 'DLX5', 'PLAC1', 'CCNI2', 'BRE.AS1', 'OR2W3', 'SLC6A17', 'RYR3', 'GHRLOS', 'ABCC2', 'PTPRR', 'ABCD2', 'TFAP2E', 'CD160', 'GRIA2', 'CD1A', 'DEFB1', 'CCDC144A', 'RGS9', 'DLK2', 'CACNA1I', 'GGT3P', 'CDKL2', 'MYO16', 'PWAR5', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'CABP4', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CHRNA10', 'TCEAL2', 'FKBP1AP1', 'UNC13A', 'AGBL4', 'SLC39A2', 'XCL2', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'ZNF727', 'LINC00202.1', 'KCNH3', 'ARL9', 'TM6SF2', 'MAK', 'SNORD116.4', 'TCN1', 'P2RY12', 'GRID2IP', 'MPL', 'HRCT1', 'PCBP3', 'SYCE3', 'TCTEX1D1', 'ELOVL3', 'GPM6A', 'CD70', 'NOX5', 'SLC46A2', 'SYCE2', 'GRIN2A', 'ARMC3', 'JAKMIP1', 'PGLYRP2', 'TIGD4', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'KLF3.AS1', 'SOSTDC1', 'ASIC3', 'LONRF3', 'LRRC43', 'AGAP7P', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'LOC400927', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'ACHE', 'CEACAM7', 'RIMS2', 'OLFM4', 'CTAGE11P', 'TMEM145', 'CD40LG', 'C6ORF52', 'HRC', 'BEGAIN', 'VN1R1', 'GPR82', 'CXADRP3', 'PAH', 'CHODL', 'TTBK1', 'LOC285593', 'MLLT4.AS1', 'CHST9', 'TTYH1', 'HIST1H2BH', 'APOBEC3A', 'GABRB3', 'ADGRL3', 'SLC25A34', 'BRSK2', 'TRH', 'MAPK4', 'CAMK4', 'DGCR5', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'EPYC', 'GBP6', 'MUC15', 'GPR63', 'CAPSL', 'SLC35F3', 'ANKLE1', 'IL17D', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'TNFSF11', 'RMRP', 'FAM201A', 'HAMP', 'MYO15A', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'PTX3', 'DCLK3', 'RHCE', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'ROPN1B', 'RUNDC3A', 'LOC100132215', 'CYP2E1', 'C1QL3', 'UCKL1.AS1', 'PNMA6A', 'LINC00961', 'CYTL1', 'FOLR1', 'RRN3P1', 'XCL1', 'SIGLEC6', 'LINC00689', 'RRN3P2', 'HBA1', 'ATP13A4', 'THSD7B', 'SLC2A14', 'ADRA2B', 'MT1L', 'ZMAT4', 'TMEM150B', 'IL1RL1', 'KISS1R', 'CCR10', 'KIF19', 'IL24', 'GLI1', 'GPR173', 'ARRDC3.AS1', 'DPEP1', 'LIN7A', 'TTLL9', 'PRRT4', 'NIPAL4', 'KIAA1210', 'GPR135', 'WBP2NL', 'A2ML1', 'RHBG', 'B3GALT5', 'PCDHB18P', 'GNMT', 'RRAD', 'CBLN1', 'FIGF', 'DPF3', 'LOC90246', 'OXGR1', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'MAP7D2', 'CACNA2D3', 'DPY19L2P4', 'MS4A8', 'SLC5A8', 'HIST1H1D', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PCDH20', 'GABRB2', 'DNAH11', 'TIFAB', 'PON3', 'KLK8', 'FOXN1', 'PHKG1', 'WFIKKN1', 'MASP2', 'CD19', 'GPR171', 'WNT10A', 'FREM2', 'LINC00669', 'ANK1', 'DCST2', 'C19ORF45', 'CRB2', 'CLCA2', 'KCNB1', 'SLC26A3', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'LINC01465', 'LINC00685', 'TYMSOS', 'RASAL1', 'CD1E', 'ANO2', 'RIC3', 'COLCA1', 'CST2', 'HNRNPCL3', 'NEURL3', 'LOC646999', 'MED12L', 'TTC41P', 'PCDHGC5', 'EYA1', 'STXBP6', 'RAB3B', 'CLPSL1', 'MYEOV', 'NRXN1', 'FAM182B', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'TDRD9', 'AJAP1', 'ZNF676', 'CR2', 'CLDN14', 'CXCR2', 'LPAR4', 'KIF4B', 'PATL2', 'FNDC8', 'CLEC4F', 'MSLN', 'KCNRG', 'MKX', 'ABHD1', 'C9ORF117', 'PDCD1', 'MAGEL2', 'NDP', 'VIT', 'HAPLN1', 'SEZ6L', 'DMRTC1B', 'POU3F1', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.1789840570009644e-15 NRMSE: 5.236683626534402e-16 MAPE: 3.916700301534307e-12 Pearson Correlation: 0.19604119209560847 Spearman Correlation: 0.20419959028387477 Coefficient of Determination: -0.9856078295623765 RMSE: 0.5927271439972583 NRMSE: 0.21314220000620604 MAPE: 1248.193857150084 Predictor: ElasticNet Pearson Correlation: 0.7973572073827991 Spearman Correlation: 0.7314271834264533 Coefficient of Determination: 0.5771850254814479 RMSE: 0.29444241299096086 NRMSE: 0.07076241600359551 MAPE: 667.5094051156225 Pearson Correlation: 0.4881651207322523 Spearman Correlation: 0.49733684518583554 Coefficient of Determination: 0.2362600943164328 RMSE: 0.36760450035573455 NRMSE: 0.13218903964750064 MAPE: 556.0436389408072 Predictor: RandomForests Pearson Correlation: 0.5029915829893747 Spearman Correlation: 0.5325551687321626 Coefficient of Determination: 0.22476513012888932 RMSE: 0.3986959624622658 NRMSE: 0.09581734257684832 MAPE: 596.5086028446158 Pearson Correlation: 0.5012043295190987 Spearman Correlation: 0.49536630572627066 Coefficient of Determination: 0.2330521507101344 RMSE: 0.3683757176139241 NRMSE: 0.1324663661454652 MAPE: 811.1548290279641 Protein: CTNNB1 x_train_column_count: 1002 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'LINC01119', 'IQUB', 'NKPD1', 'LINC01341', 'SOX8', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'PPP1R3G', 'C19ORF18', 'FXYD1', 'RNF138P1', 'CCIN', 'MYCBPAP', 'ETV2', 'XPNPEP2', 'TEKT3', 'STKLD1', 'SLC30A8', 'UGT8', 'SLC28A3', 'CCR8', 'METTL7B', 'HEPACAM2', 'UBE2Q2P1', 'TEX14', 'PLP1', 'SLC25A18', 'JPH4', 'IDI2.AS1', 'CASQ1', 'S100A3', 'LINC00482', 'LRIT3', 'GLIS1', 'SGK2', 'CCDC36', 'NR1I3', 'ALOXE3', 'ZNF843', 'CACNG1', 'MS4A15', 'WNT2B', 'PBX4', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'LGALS2', 'PYGO1', 'TMEM92', 'FUT9', 'ADAMTS8', 'BCHE', 'AOC2', 'GJB1', 'C9ORF43', 'CCDC151', 'FCRL6', 'PNCK', 'PITX2', 'TNNI3K', 'FAM189A1', 'DQX1', 'LPAR3', 'CKMT2', 'ABCA17P', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'NLRP12', 'C1ORF101', 'CLDN9', 'IYD', 'ZNF835', 'SLC6A20', 'OTOA', 'CA3', 'SPIB', 'FAM95B1', 'FAM90A1', 'C1ORF95', 'C2CD4A', 'RYR2', 'PCDH9', 'CCDC158', 'CLEC3A', 'SCN2B', 'CLECL1', 'PCSK1N', 'ULBP3', 'SVOPL', 'LINC01550', 'GSDMC', 'ARC', 'TAS1R3', 'CCDC65', 'IL20RB', 'DDX11L2', 'VSIG1', 'AURKC', 'TTC16', 'ZCCHC18', 'PDE1C', 'ALDH8A1', 'COLCA2', 'PCYT1B', 'MYOZ1', 'BPIFB2', 'KNDC1', 'B3GALT5.AS1', 'DUOXA1', 'CRYGS', 'GSTM1', 'PPP1R36', 'KLHL4', 'LOC148709', 'LOC441455', 'CPEB1', 'OR7E91P', 'IL22RA1', 'HOXD3', 'TARP', 'FAM57B', 'LOC90768', 'CAMP', 'JPH3', 'LUZP2', 'FUT7', 'IL12RB2', 'PLA2G5', 'RIMS1', 'FLJ37201', 'LBX2', 'SCARA5', 'RELN', 'HOXB13', 'CD177', 'IGSF5', 'TUBB8', 'SLC22A18AS', 'HIST1H2BN', 'ZBED3.AS1', 'GPR18', 'ASTN1', 'ZC3H12D', 'KCNE1', 'MNX1', 'TCHH', 'CIDEA', 'ONECUT2', 'GAL', 'KCNE2', 'SP5', 'WDR72', 'BTBD8', 'CHRNA6', 'FAM135B', 'IRX4', 'C10ORF128', 'SLC16A10', 'RSPH4A', 'MGC16142', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'CCDC7', 'MGAT5B', 'YPEL4', 'GBP1P1', 'DCSTAMP', 'CELF5', 'CXXC4', 'GRIN2C', 'GPR3', 'SKIDA1', 'OBP2B', 'CXCR5', 'SLC35F1', 'PYDC1', 'SLC30A2', 'HOXA11', 'NIPAL1', 'ATP13A5', 'CCDC153', 'FOXJ1', 'STRC', 'SRL', 'WT1', 'PCSK9', 'PCAT18', 'TNFRSF9', 'LRP1B', 'RPGRIP1', 'INSM1', 'GPR174', 'CNNM1', 'PCK1', 'NOXO1', 'SLC18A2', 'C17ORF104', 'SLC25A53', 'FOXD4', 'DMRT3', 'PPP4R4', 'MARCO', 'GPX2', 'LBP', 'IL20', 'COL23A1', 'INHA', 'FOXD1', 'NOS2', 'PKNOX2', 'BTLA', 'TNFRSF17', 'CRISP3', 'ADH1C', 'KLHL14', 'AVPR2', 'CXCL2', 'GLOD5', 'MYBPC1', 'PARP15', 'GPLD1', 'PFN1P2', 'GPR55', 'CST9', 'SLCO4C1', 'STEAP1B', 'BCL2L14', 'SLC23A1', 'C2ORF40', 'DHRS4L1', 'SCN3A', 'AMH', 'CXCR2P1', 'ZNF98', 'VAT1L', 'ULBP2', 'VSIG2', 'ZNF454', 'RNF212', 'TPSG1', 'VGLL1', 'CYSLTR2', 'HAP1', 'P2RX1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'TMEM105', 'ORM1', 'FAM178B', 'DKK1', 'ZNF488', 'IL23A', 'DPY19L2P2', 'AMBP', 'PRKG2', 'CXCL1', 'SIGLEC17P', 'CRYM', 'SUCNR1', 'DEPDC4', 'SPDYE1', 'FABP7', 'LRRC2', 'GPBAR1', 'CTCFL', 'BRINP1', 'BDKRB1', 'LRGUK', 'XIRP1', 'ADAMTS18', 'VWDE', 'LINC00930', 'FUT6', 'RERGL', 'TENM1', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'KIAA0319', 'NUGGC', 'CECR2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'PKD1L1', 'SSUH2', 'WSCD2', 'CBLN2', 'ECEL1', 'SPESP1', 'SEC14L5', 'ABHD11.AS1', 'FSCN2', 'DMRT2', 'CCL17', 'ZNF732', 'FAM162B', 'PIANP', 'HOXD4', 'GNB3', 'TMEM217', 'CTSG', 'GRIA3', 'RSPO1', 'RGS6', 'SERPINA6', 'ADAMTS19', 'IL1R2', 'MT1A', 'RNF175', 'ADAM32', 'COL2A1', 'CHRNB2', 'FLJ12825', 'POM121L9P', 'PFKFB1', 'RASL10A', 'HECTD2.AS1', 'PRSS21', 'DIRC3', 'LRRC16B', 'CYP46A1', 'SMIM5', 'FOXC2', 'CAPN11', 'ZNF804A', 'IGF2BP3', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'CYSRT1', 'VIPR2', 'GPR87', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'SLC13A2', 'XKR9', 'CA9', 'HTR7', 'HOGA1', 'EMX1', 'WIPF3', 'CEP83.AS1', 'ZSCAN1', 'ZBTB16', 'CITED1', 'OTUD7A', 'TMEM40', 'CYP26A1', 'TMSB15A', 'WFDC3', 'MAPT.IT1', 'CDHR1', 'ANKK1', 'GZMM', 'ROPN1L', 'PVALB', 'FIRRE', 'M1AP', 'MYO3B', 'INE2', 'CRTAC1', 'MRAP2', 'IGSF22', 'RFX8', 'RBM12B.AS1', 'SPAG17', 'TTC23L', 'HEATR4', 'PYGM', 'MROH7', 'PCDHA12', 'CFAP61', 'BTC', 'KCNT2', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'B3GAT1', 'OPCML', 'SRSF12', 'NWD1', 'LRRC4B', 'CIDEC', 'CCBE1', 'ADGRF1', 'CLEC4E', 'MIA', 'LINC00173', 'TMEM59L', 'HPDL', 'TSPAN8', 'RNF182', 'FRMPD1', 'GALNT13', 'SMC1B', 'KCNA6', 'KLK6', 'LSAMP', 'LOC613037', 'ABCC6P2', 'FASLG', 'IL11', 'NLRP7', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'COL28A1', 'C15ORF56', 'FAM83A', 'PSORS1C1', 'ANO5', 'SLC16A11', 'PTCHD1', 'SLC6A14', 'SLC24A5', 'C9ORF47', 'ADGRG2', 'TMPRSS4', 'TUSC5', 'LINC00908', 'RUFY4', 'CYP4F12', 'INTS4P2', 'PIK3C2G', 'IGSF1', 'KCNQ3', 'LOC100133669', 'VENTX', 'MYOM2', 'FAM157A', 'NBPF4', 'EBF2', 'MAG', 'DSCAML1', 'PCDHA5', 'PTPRN', 'KLK7', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'SFTPA2', 'CNTN2', 'ZBTB20', 'FAM19A2', 'NKX3.2', 'DLX5', 'PLAC1', 'CCNI2', 'BRE.AS1', 'OR2W3', 'SLC6A17', 'RYR3', 'GHRLOS', 'ABCC2', 'PTPRR', 'ABCD2', 'TFAP2E', 'CD160', 'GRIA2', 'CD1A', 'DEFB1', 'CCDC144A', 'RGS9', 'DLK2', 'CACNA1I', 'GGT3P', 'CDKL2', 'MYO16', 'PWAR5', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'CABP4', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CHRNA10', 'TCEAL2', 'FKBP1AP1', 'UNC13A', 'AGBL4', 'SLC39A2', 'XCL2', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'ZNF727', 'LINC00202.1', 'KCNH3', 'ARL9', 'TM6SF2', 'MAK', 'SNORD116.4', 'TCN1', 'P2RY12', 'GRID2IP', 'MPL', 'HRCT1', 'PCBP3', 'SYCE3', 'TCTEX1D1', 'ELOVL3', 'GPM6A', 'CD70', 'NOX5', 'SLC46A2', 'SYCE2', 'GRIN2A', 'ARMC3', 'JAKMIP1', 'PGLYRP2', 'TIGD4', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'KLF3.AS1', 'SOSTDC1', 'ASIC3', 'LONRF3', 'LRRC43', 'AGAP7P', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'LOC400927', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'ACHE', 'CEACAM7', 'RIMS2', 'OLFM4', 'CTAGE11P', 'TMEM145', 'CD40LG', 'C6ORF52', 'HRC', 'BEGAIN', 'VN1R1', 'GPR82', 'CXADRP3', 'PAH', 'CHODL', 'TTBK1', 'LOC285593', 'MLLT4.AS1', 'CHST9', 'TTYH1', 'HIST1H2BH', 'APOBEC3A', 'GABRB3', 'ADGRL3', 'SLC25A34', 'BRSK2', 'TRH', 'MAPK4', 'CAMK4', 'DGCR5', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'EPYC', 'GBP6', 'MUC15', 'GPR63', 'CAPSL', 'SLC35F3', 'ANKLE1', 'IL17D', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'TNFSF11', 'RMRP', 'FAM201A', 'HAMP', 'MYO15A', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'PTX3', 'DCLK3', 'RHCE', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'ROPN1B', 'RUNDC3A', 'LOC100132215', 'CYP2E1', 'C1QL3', 'UCKL1.AS1', 'PNMA6A', 'LINC00961', 'CYTL1', 'FOLR1', 'RRN3P1', 'XCL1', 'SIGLEC6', 'LINC00689', 'RRN3P2', 'HBA1', 'ATP13A4', 'THSD7B', 'SLC2A14', 'ADRA2B', 'MT1L', 'ZMAT4', 'TMEM150B', 'IL1RL1', 'KISS1R', 'CCR10', 'KIF19', 'IL24', 'GLI1', 'GPR173', 'ARRDC3.AS1', 'DPEP1', 'LIN7A', 'TTLL9', 'PRRT4', 'NIPAL4', 'KIAA1210', 'GPR135', 'WBP2NL', 'A2ML1', 'RHBG', 'B3GALT5', 'PCDHB18P', 'GNMT', 'RRAD', 'CBLN1', 'FIGF', 'DPF3', 'LOC90246', 'OXGR1', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'MAP7D2', 'CACNA2D3', 'DPY19L2P4', 'MS4A8', 'SLC5A8', 'HIST1H1D', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PCDH20', 'GABRB2', 'DNAH11', 'TIFAB', 'PON3', 'KLK8', 'FOXN1', 'PHKG1', 'WFIKKN1', 'MASP2', 'CD19', 'GPR171', 'WNT10A', 'FREM2', 'LINC00669', 'ANK1', 'DCST2', 'C19ORF45', 'CRB2', 'CLCA2', 'KCNB1', 'SLC26A3', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'LINC01465', 'LINC00685', 'TYMSOS', 'RASAL1', 'CD1E', 'ANO2', 'RIC3', 'COLCA1', 'CST2', 'HNRNPCL3', 'NEURL3', 'LOC646999', 'MED12L', 'TTC41P', 'PCDHGC5', 'EYA1', 'STXBP6', 'RAB3B', 'CLPSL1', 'MYEOV', 'NRXN1', 'FAM182B', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'TDRD9', 'AJAP1', 'ZNF676', 'CR2', 'CLDN14', 'CXCR2', 'LPAR4', 'KIF4B', 'PATL2', 'FNDC8', 'CLEC4F', 'MSLN', 'KCNRG', 'MKX', 'ABHD1', 'C9ORF117', 'PDCD1', 'MAGEL2', 'NDP', 'VIT', 'HAPLN1', 'SEZ6L', 'DMRTC1B', 'POU3F1', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 3.831440632498709e-15 NRMSE: 7.722032030349898e-16 MAPE: 3.123906408869569e-12 Pearson Correlation: 0.19326249956210934 Spearman Correlation: 0.15710662374402498 Coefficient of Determination: -0.6465249060434 RMSE: 0.9636063775957641 NRMSE: 0.23907268833319212 MAPE: 464.7187396138108 Predictor: ElasticNet Pearson Correlation: 0.8919821903600752 Spearman Correlation: 0.8777312028231463 Coefficient of Determination: 0.7382176934182914 RMSE: 0.37720391173336193 NRMSE: 0.07602311944159501 MAPE: 397.560962765241 Pearson Correlation: 0.38310891281679693 Spearman Correlation: 0.3302994829772705 Coefficient of Determination: 0.0987856401542776 RMSE: 0.7129015599761245 NRMSE: 0.176872316770735 MAPE: 258.1440161078364 Predictor: RandomForests Pearson Correlation: 0.5098970475481593 Spearman Correlation: 0.533165267509774 Coefficient of Determination: 0.20566286057944128 RMSE: 0.6570652163462999 NRMSE: 0.13242743744005078 MAPE: 617.4356350486823 Pearson Correlation: 0.46791161910762796 Spearman Correlation: 0.4400302409521023 Coefficient of Determination: 0.17181329030801507 RMSE: 0.6834073447087019 NRMSE: 0.16955474239783208 MAPE: 259.15575567819286 Protein: CCNE1 x_train_column_count: 1002 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'LINC01119', 'IQUB', 'NKPD1', 'LINC01341', 'SOX8', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'PPP1R3G', 'C19ORF18', 'FXYD1', 'RNF138P1', 'CCIN', 'MYCBPAP', 'ETV2', 'XPNPEP2', 'TEKT3', 'STKLD1', 'SLC30A8', 'UGT8', 'SLC28A3', 'CCR8', 'METTL7B', 'HEPACAM2', 'UBE2Q2P1', 'TEX14', 'PLP1', 'SLC25A18', 'JPH4', 'IDI2.AS1', 'CASQ1', 'S100A3', 'LINC00482', 'LRIT3', 'GLIS1', 'SGK2', 'CCDC36', 'NR1I3', 'ALOXE3', 'ZNF843', 'CACNG1', 'MS4A15', 'WNT2B', 'PBX4', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'LGALS2', 'PYGO1', 'TMEM92', 'FUT9', 'ADAMTS8', 'BCHE', 'AOC2', 'GJB1', 'C9ORF43', 'CCDC151', 'FCRL6', 'PNCK', 'PITX2', 'TNNI3K', 'FAM189A1', 'DQX1', 'LPAR3', 'CKMT2', 'ABCA17P', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'NLRP12', 'C1ORF101', 'CLDN9', 'IYD', 'ZNF835', 'SLC6A20', 'OTOA', 'CA3', 'SPIB', 'FAM95B1', 'FAM90A1', 'C1ORF95', 'C2CD4A', 'RYR2', 'PCDH9', 'CCDC158', 'CLEC3A', 'SCN2B', 'CLECL1', 'PCSK1N', 'ULBP3', 'SVOPL', 'LINC01550', 'GSDMC', 'ARC', 'TAS1R3', 'CCDC65', 'IL20RB', 'DDX11L2', 'VSIG1', 'AURKC', 'TTC16', 'ZCCHC18', 'PDE1C', 'ALDH8A1', 'COLCA2', 'PCYT1B', 'MYOZ1', 'BPIFB2', 'KNDC1', 'B3GALT5.AS1', 'DUOXA1', 'CRYGS', 'GSTM1', 'PPP1R36', 'KLHL4', 'LOC148709', 'LOC441455', 'CPEB1', 'OR7E91P', 'IL22RA1', 'HOXD3', 'TARP', 'FAM57B', 'LOC90768', 'CAMP', 'JPH3', 'LUZP2', 'FUT7', 'IL12RB2', 'PLA2G5', 'RIMS1', 'FLJ37201', 'LBX2', 'SCARA5', 'RELN', 'HOXB13', 'CD177', 'IGSF5', 'TUBB8', 'SLC22A18AS', 'HIST1H2BN', 'ZBED3.AS1', 'GPR18', 'ASTN1', 'ZC3H12D', 'KCNE1', 'MNX1', 'TCHH', 'CIDEA', 'ONECUT2', 'GAL', 'KCNE2', 'SP5', 'WDR72', 'BTBD8', 'CHRNA6', 'FAM135B', 'IRX4', 'C10ORF128', 'SLC16A10', 'RSPH4A', 'MGC16142', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'CCDC7', 'MGAT5B', 'YPEL4', 'GBP1P1', 'DCSTAMP', 'CELF5', 'CXXC4', 'GRIN2C', 'GPR3', 'SKIDA1', 'OBP2B', 'CXCR5', 'SLC35F1', 'PYDC1', 'SLC30A2', 'HOXA11', 'NIPAL1', 'ATP13A5', 'CCDC153', 'FOXJ1', 'STRC', 'SRL', 'WT1', 'PCSK9', 'PCAT18', 'TNFRSF9', 'LRP1B', 'RPGRIP1', 'INSM1', 'GPR174', 'CNNM1', 'PCK1', 'NOXO1', 'SLC18A2', 'C17ORF104', 'SLC25A53', 'FOXD4', 'DMRT3', 'PPP4R4', 'MARCO', 'GPX2', 'LBP', 'IL20', 'COL23A1', 'INHA', 'FOXD1', 'NOS2', 'PKNOX2', 'BTLA', 'TNFRSF17', 'CRISP3', 'ADH1C', 'KLHL14', 'AVPR2', 'CXCL2', 'GLOD5', 'MYBPC1', 'PARP15', 'GPLD1', 'PFN1P2', 'GPR55', 'CST9', 'SLCO4C1', 'STEAP1B', 'BCL2L14', 'SLC23A1', 'C2ORF40', 'DHRS4L1', 'SCN3A', 'AMH', 'CXCR2P1', 'ZNF98', 'VAT1L', 'ULBP2', 'VSIG2', 'ZNF454', 'RNF212', 'TPSG1', 'VGLL1', 'CYSLTR2', 'HAP1', 'P2RX1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'TMEM105', 'ORM1', 'FAM178B', 'DKK1', 'ZNF488', 'IL23A', 'DPY19L2P2', 'AMBP', 'PRKG2', 'CXCL1', 'SIGLEC17P', 'CRYM', 'SUCNR1', 'DEPDC4', 'SPDYE1', 'FABP7', 'LRRC2', 'GPBAR1', 'CTCFL', 'BRINP1', 'BDKRB1', 'LRGUK', 'XIRP1', 'ADAMTS18', 'VWDE', 'LINC00930', 'FUT6', 'RERGL', 'TENM1', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'KIAA0319', 'NUGGC', 'CECR2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'PKD1L1', 'SSUH2', 'WSCD2', 'CBLN2', 'ECEL1', 'SPESP1', 'SEC14L5', 'ABHD11.AS1', 'FSCN2', 'DMRT2', 'CCL17', 'ZNF732', 'FAM162B', 'PIANP', 'HOXD4', 'GNB3', 'TMEM217', 'CTSG', 'GRIA3', 'RSPO1', 'RGS6', 'SERPINA6', 'ADAMTS19', 'IL1R2', 'MT1A', 'RNF175', 'ADAM32', 'COL2A1', 'CHRNB2', 'FLJ12825', 'POM121L9P', 'PFKFB1', 'RASL10A', 'HECTD2.AS1', 'PRSS21', 'DIRC3', 'LRRC16B', 'CYP46A1', 'SMIM5', 'FOXC2', 'CAPN11', 'ZNF804A', 'IGF2BP3', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'CYSRT1', 'VIPR2', 'GPR87', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'SLC13A2', 'XKR9', 'CA9', 'HTR7', 'HOGA1', 'EMX1', 'WIPF3', 'CEP83.AS1', 'ZSCAN1', 'ZBTB16', 'CITED1', 'OTUD7A', 'TMEM40', 'CYP26A1', 'TMSB15A', 'WFDC3', 'MAPT.IT1', 'CDHR1', 'ANKK1', 'GZMM', 'ROPN1L', 'PVALB', 'FIRRE', 'M1AP', 'MYO3B', 'INE2', 'CRTAC1', 'MRAP2', 'IGSF22', 'RFX8', 'RBM12B.AS1', 'SPAG17', 'TTC23L', 'HEATR4', 'PYGM', 'MROH7', 'PCDHA12', 'CFAP61', 'BTC', 'KCNT2', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'B3GAT1', 'OPCML', 'SRSF12', 'NWD1', 'LRRC4B', 'CIDEC', 'CCBE1', 'ADGRF1', 'CLEC4E', 'MIA', 'LINC00173', 'TMEM59L', 'HPDL', 'TSPAN8', 'RNF182', 'FRMPD1', 'GALNT13', 'SMC1B', 'KCNA6', 'KLK6', 'LSAMP', 'LOC613037', 'ABCC6P2', 'FASLG', 'IL11', 'NLRP7', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'COL28A1', 'C15ORF56', 'FAM83A', 'PSORS1C1', 'ANO5', 'SLC16A11', 'PTCHD1', 'SLC6A14', 'SLC24A5', 'C9ORF47', 'ADGRG2', 'TMPRSS4', 'TUSC5', 'LINC00908', 'RUFY4', 'CYP4F12', 'INTS4P2', 'PIK3C2G', 'IGSF1', 'KCNQ3', 'LOC100133669', 'VENTX', 'MYOM2', 'FAM157A', 'NBPF4', 'EBF2', 'MAG', 'DSCAML1', 'PCDHA5', 'PTPRN', 'KLK7', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'SFTPA2', 'CNTN2', 'ZBTB20', 'FAM19A2', 'NKX3.2', 'DLX5', 'PLAC1', 'CCNI2', 'BRE.AS1', 'OR2W3', 'SLC6A17', 'RYR3', 'GHRLOS', 'ABCC2', 'PTPRR', 'ABCD2', 'TFAP2E', 'CD160', 'GRIA2', 'CD1A', 'DEFB1', 'CCDC144A', 'RGS9', 'DLK2', 'CACNA1I', 'GGT3P', 'CDKL2', 'MYO16', 'PWAR5', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'CABP4', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CHRNA10', 'TCEAL2', 'FKBP1AP1', 'UNC13A', 'AGBL4', 'SLC39A2', 'XCL2', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'ZNF727', 'LINC00202.1', 'KCNH3', 'ARL9', 'TM6SF2', 'MAK', 'SNORD116.4', 'TCN1', 'P2RY12', 'GRID2IP', 'MPL', 'HRCT1', 'PCBP3', 'SYCE3', 'TCTEX1D1', 'ELOVL3', 'GPM6A', 'CD70', 'NOX5', 'SLC46A2', 'SYCE2', 'GRIN2A', 'ARMC3', 'JAKMIP1', 'PGLYRP2', 'TIGD4', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'KLF3.AS1', 'SOSTDC1', 'ASIC3', 'LONRF3', 'LRRC43', 'AGAP7P', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'LOC400927', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'ACHE', 'CEACAM7', 'RIMS2', 'OLFM4', 'CTAGE11P', 'TMEM145', 'CD40LG', 'C6ORF52', 'HRC', 'BEGAIN', 'VN1R1', 'GPR82', 'CXADRP3', 'PAH', 'CHODL', 'TTBK1', 'LOC285593', 'MLLT4.AS1', 'CHST9', 'TTYH1', 'HIST1H2BH', 'APOBEC3A', 'GABRB3', 'ADGRL3', 'SLC25A34', 'BRSK2', 'TRH', 'MAPK4', 'CAMK4', 'DGCR5', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'EPYC', 'GBP6', 'MUC15', 'GPR63', 'CAPSL', 'SLC35F3', 'ANKLE1', 'IL17D', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'TNFSF11', 'RMRP', 'FAM201A', 'HAMP', 'MYO15A', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'PTX3', 'DCLK3', 'RHCE', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'ROPN1B', 'RUNDC3A', 'LOC100132215', 'CYP2E1', 'C1QL3', 'UCKL1.AS1', 'PNMA6A', 'LINC00961', 'CYTL1', 'FOLR1', 'RRN3P1', 'XCL1', 'SIGLEC6', 'LINC00689', 'RRN3P2', 'HBA1', 'ATP13A4', 'THSD7B', 'SLC2A14', 'ADRA2B', 'MT1L', 'ZMAT4', 'TMEM150B', 'IL1RL1', 'KISS1R', 'CCR10', 'KIF19', 'IL24', 'GLI1', 'GPR173', 'ARRDC3.AS1', 'DPEP1', 'LIN7A', 'TTLL9', 'PRRT4', 'NIPAL4', 'KIAA1210', 'GPR135', 'WBP2NL', 'A2ML1', 'RHBG', 'B3GALT5', 'PCDHB18P', 'GNMT', 'RRAD', 'CBLN1', 'FIGF', 'DPF3', 'LOC90246', 'OXGR1', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'MAP7D2', 'CACNA2D3', 'DPY19L2P4', 'MS4A8', 'SLC5A8', 'HIST1H1D', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PCDH20', 'GABRB2', 'DNAH11', 'TIFAB', 'PON3', 'KLK8', 'FOXN1', 'PHKG1', 'WFIKKN1', 'MASP2', 'CD19', 'GPR171', 'WNT10A', 'FREM2', 'LINC00669', 'ANK1', 'DCST2', 'C19ORF45', 'CRB2', 'CLCA2', 'KCNB1', 'SLC26A3', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'LINC01465', 'LINC00685', 'TYMSOS', 'RASAL1', 'CD1E', 'ANO2', 'RIC3', 'COLCA1', 'CST2', 'HNRNPCL3', 'NEURL3', 'LOC646999', 'MED12L', 'TTC41P', 'PCDHGC5', 'EYA1', 'STXBP6', 'RAB3B', 'CLPSL1', 'MYEOV', 'NRXN1', 'FAM182B', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'TDRD9', 'AJAP1', 'ZNF676', 'CR2', 'CLDN14', 'CXCR2', 'LPAR4', 'KIF4B', 'PATL2', 'FNDC8', 'CLEC4F', 'MSLN', 'KCNRG', 'MKX', 'ABHD1', 'C9ORF117', 'PDCD1', 'MAGEL2', 'NDP', 'VIT', 'HAPLN1', 'SEZ6L', 'DMRTC1B', 'POU3F1', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 2.9175436054506287e-15 NRMSE: 7.04091417199756e-16 MAPE: 7.081229321295012e-13 Pearson Correlation: 0.467421329118913 Spearman Correlation: 0.37709491756901775 Coefficient of Determination: 0.01130829061502936 RMSE: 0.5339948837153116 NRMSE: 0.19020298618532913 MAPE: 74.92122820067728 Predictor: ElasticNet Pearson Correlation: 0.8576348422799417 Spearman Correlation: 0.7802181686303604 Coefficient of Determination: 0.7047642096870712 RMSE: 0.26280564816801344 NRMSE: 0.06342294282115342 MAPE: 50.47075887238335 Pearson Correlation: 0.7279921553157008 Spearman Correlation: 0.6359379572724613 Coefficient of Determination: 0.5122564020350218 RMSE: 0.3750614589188257 NRMSE: 0.13359268349735554 MAPE: 46.32975291160004 Predictor: RandomForests Pearson Correlation: 0.6566517149692032 Spearman Correlation: 0.6073138354471782 Coefficient of Determination: 0.3857963350539656 RMSE: 0.3790586350522441 NRMSE: 0.09147830080658448 MAPE: 81.77787328793255 Pearson Correlation: 0.7097013685580461 Spearman Correlation: 0.5471124768315286 Coefficient of Determination: 0.41122135446701913 RMSE: 0.41208107979130326 NRMSE: 0.14677865709396376 MAPE: 56.559159947954704 Protein: CCND1 x_train_column_count: 1002 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'LINC01119', 'IQUB', 'NKPD1', 'LINC01341', 'SOX8', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'PPP1R3G', 'C19ORF18', 'FXYD1', 'RNF138P1', 'CCIN', 'MYCBPAP', 'ETV2', 'XPNPEP2', 'TEKT3', 'STKLD1', 'SLC30A8', 'UGT8', 'SLC28A3', 'CCR8', 'METTL7B', 'HEPACAM2', 'UBE2Q2P1', 'TEX14', 'PLP1', 'SLC25A18', 'JPH4', 'IDI2.AS1', 'CASQ1', 'S100A3', 'LINC00482', 'LRIT3', 'GLIS1', 'SGK2', 'CCDC36', 'NR1I3', 'ALOXE3', 'ZNF843', 'CACNG1', 'MS4A15', 'WNT2B', 'PBX4', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'LGALS2', 'PYGO1', 'TMEM92', 'FUT9', 'ADAMTS8', 'BCHE', 'AOC2', 'GJB1', 'C9ORF43', 'CCDC151', 'FCRL6', 'PNCK', 'PITX2', 'TNNI3K', 'FAM189A1', 'DQX1', 'LPAR3', 'CKMT2', 'ABCA17P', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'NLRP12', 'C1ORF101', 'CLDN9', 'IYD', 'ZNF835', 'SLC6A20', 'OTOA', 'CA3', 'SPIB', 'FAM95B1', 'FAM90A1', 'C1ORF95', 'C2CD4A', 'RYR2', 'PCDH9', 'CCDC158', 'CLEC3A', 'SCN2B', 'CLECL1', 'PCSK1N', 'ULBP3', 'SVOPL', 'LINC01550', 'GSDMC', 'ARC', 'TAS1R3', 'CCDC65', 'IL20RB', 'DDX11L2', 'VSIG1', 'AURKC', 'TTC16', 'ZCCHC18', 'PDE1C', 'ALDH8A1', 'COLCA2', 'PCYT1B', 'MYOZ1', 'BPIFB2', 'KNDC1', 'B3GALT5.AS1', 'DUOXA1', 'CRYGS', 'GSTM1', 'PPP1R36', 'KLHL4', 'LOC148709', 'LOC441455', 'CPEB1', 'OR7E91P', 'IL22RA1', 'HOXD3', 'TARP', 'FAM57B', 'LOC90768', 'CAMP', 'JPH3', 'LUZP2', 'FUT7', 'IL12RB2', 'PLA2G5', 'RIMS1', 'FLJ37201', 'LBX2', 'SCARA5', 'RELN', 'HOXB13', 'CD177', 'IGSF5', 'TUBB8', 'SLC22A18AS', 'HIST1H2BN', 'ZBED3.AS1', 'GPR18', 'ASTN1', 'ZC3H12D', 'KCNE1', 'MNX1', 'TCHH', 'CIDEA', 'ONECUT2', 'GAL', 'KCNE2', 'SP5', 'WDR72', 'BTBD8', 'CHRNA6', 'FAM135B', 'IRX4', 'C10ORF128', 'SLC16A10', 'RSPH4A', 'MGC16142', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'CCDC7', 'MGAT5B', 'YPEL4', 'GBP1P1', 'DCSTAMP', 'CELF5', 'CXXC4', 'GRIN2C', 'GPR3', 'SKIDA1', 'OBP2B', 'CXCR5', 'SLC35F1', 'PYDC1', 'SLC30A2', 'HOXA11', 'NIPAL1', 'ATP13A5', 'CCDC153', 'FOXJ1', 'STRC', 'SRL', 'WT1', 'PCSK9', 'PCAT18', 'TNFRSF9', 'LRP1B', 'RPGRIP1', 'INSM1', 'GPR174', 'CNNM1', 'PCK1', 'NOXO1', 'SLC18A2', 'C17ORF104', 'SLC25A53', 'FOXD4', 'DMRT3', 'PPP4R4', 'MARCO', 'GPX2', 'LBP', 'IL20', 'COL23A1', 'INHA', 'FOXD1', 'NOS2', 'PKNOX2', 'BTLA', 'TNFRSF17', 'CRISP3', 'ADH1C', 'KLHL14', 'AVPR2', 'CXCL2', 'GLOD5', 'MYBPC1', 'PARP15', 'GPLD1', 'PFN1P2', 'GPR55', 'CST9', 'SLCO4C1', 'STEAP1B', 'BCL2L14', 'SLC23A1', 'C2ORF40', 'DHRS4L1', 'SCN3A', 'AMH', 'CXCR2P1', 'ZNF98', 'VAT1L', 'ULBP2', 'VSIG2', 'ZNF454', 'RNF212', 'TPSG1', 'VGLL1', 'CYSLTR2', 'HAP1', 'P2RX1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'TMEM105', 'ORM1', 'FAM178B', 'DKK1', 'ZNF488', 'IL23A', 'DPY19L2P2', 'AMBP', 'PRKG2', 'CXCL1', 'SIGLEC17P', 'CRYM', 'SUCNR1', 'DEPDC4', 'SPDYE1', 'FABP7', 'LRRC2', 'GPBAR1', 'CTCFL', 'BRINP1', 'BDKRB1', 'LRGUK', 'XIRP1', 'ADAMTS18', 'VWDE', 'LINC00930', 'FUT6', 'RERGL', 'TENM1', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'KIAA0319', 'NUGGC', 'CECR2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'PKD1L1', 'SSUH2', 'WSCD2', 'CBLN2', 'ECEL1', 'SPESP1', 'SEC14L5', 'ABHD11.AS1', 'FSCN2', 'DMRT2', 'CCL17', 'ZNF732', 'FAM162B', 'PIANP', 'HOXD4', 'GNB3', 'TMEM217', 'CTSG', 'GRIA3', 'RSPO1', 'RGS6', 'SERPINA6', 'ADAMTS19', 'IL1R2', 'MT1A', 'RNF175', 'ADAM32', 'COL2A1', 'CHRNB2', 'FLJ12825', 'POM121L9P', 'PFKFB1', 'RASL10A', 'HECTD2.AS1', 'PRSS21', 'DIRC3', 'LRRC16B', 'CYP46A1', 'SMIM5', 'FOXC2', 'CAPN11', 'ZNF804A', 'IGF2BP3', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'CYSRT1', 'VIPR2', 'GPR87', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'SLC13A2', 'XKR9', 'CA9', 'HTR7', 'HOGA1', 'EMX1', 'WIPF3', 'CEP83.AS1', 'ZSCAN1', 'ZBTB16', 'CITED1', 'OTUD7A', 'TMEM40', 'CYP26A1', 'TMSB15A', 'WFDC3', 'MAPT.IT1', 'CDHR1', 'ANKK1', 'GZMM', 'ROPN1L', 'PVALB', 'FIRRE', 'M1AP', 'MYO3B', 'INE2', 'CRTAC1', 'MRAP2', 'IGSF22', 'RFX8', 'RBM12B.AS1', 'SPAG17', 'TTC23L', 'HEATR4', 'PYGM', 'MROH7', 'PCDHA12', 'CFAP61', 'BTC', 'KCNT2', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'B3GAT1', 'OPCML', 'SRSF12', 'NWD1', 'LRRC4B', 'CIDEC', 'CCBE1', 'ADGRF1', 'CLEC4E', 'MIA', 'LINC00173', 'TMEM59L', 'HPDL', 'TSPAN8', 'RNF182', 'FRMPD1', 'GALNT13', 'SMC1B', 'KCNA6', 'KLK6', 'LSAMP', 'LOC613037', 'ABCC6P2', 'FASLG', 'IL11', 'NLRP7', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'COL28A1', 'C15ORF56', 'FAM83A', 'PSORS1C1', 'ANO5', 'SLC16A11', 'PTCHD1', 'SLC6A14', 'SLC24A5', 'C9ORF47', 'ADGRG2', 'TMPRSS4', 'TUSC5', 'LINC00908', 'RUFY4', 'CYP4F12', 'INTS4P2', 'PIK3C2G', 'IGSF1', 'KCNQ3', 'LOC100133669', 'VENTX', 'MYOM2', 'FAM157A', 'NBPF4', 'EBF2', 'MAG', 'DSCAML1', 'PCDHA5', 'PTPRN', 'KLK7', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'SFTPA2', 'CNTN2', 'ZBTB20', 'FAM19A2', 'NKX3.2', 'DLX5', 'PLAC1', 'CCNI2', 'BRE.AS1', 'OR2W3', 'SLC6A17', 'RYR3', 'GHRLOS', 'ABCC2', 'PTPRR', 'ABCD2', 'TFAP2E', 'CD160', 'GRIA2', 'CD1A', 'DEFB1', 'CCDC144A', 'RGS9', 'DLK2', 'CACNA1I', 'GGT3P', 'CDKL2', 'MYO16', 'PWAR5', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'CABP4', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CHRNA10', 'TCEAL2', 'FKBP1AP1', 'UNC13A', 'AGBL4', 'SLC39A2', 'XCL2', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'ZNF727', 'LINC00202.1', 'KCNH3', 'ARL9', 'TM6SF2', 'MAK', 'SNORD116.4', 'TCN1', 'P2RY12', 'GRID2IP', 'MPL', 'HRCT1', 'PCBP3', 'SYCE3', 'TCTEX1D1', 'ELOVL3', 'GPM6A', 'CD70', 'NOX5', 'SLC46A2', 'SYCE2', 'GRIN2A', 'ARMC3', 'JAKMIP1', 'PGLYRP2', 'TIGD4', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'KLF3.AS1', 'SOSTDC1', 'ASIC3', 'LONRF3', 'LRRC43', 'AGAP7P', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'LOC400927', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'ACHE', 'CEACAM7', 'RIMS2', 'OLFM4', 'CTAGE11P', 'TMEM145', 'CD40LG', 'C6ORF52', 'HRC', 'BEGAIN', 'VN1R1', 'GPR82', 'CXADRP3', 'PAH', 'CHODL', 'TTBK1', 'LOC285593', 'MLLT4.AS1', 'CHST9', 'TTYH1', 'HIST1H2BH', 'APOBEC3A', 'GABRB3', 'ADGRL3', 'SLC25A34', 'BRSK2', 'TRH', 'MAPK4', 'CAMK4', 'DGCR5', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'EPYC', 'GBP6', 'MUC15', 'GPR63', 'CAPSL', 'SLC35F3', 'ANKLE1', 'IL17D', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'TNFSF11', 'RMRP', 'FAM201A', 'HAMP', 'MYO15A', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'PTX3', 'DCLK3', 'RHCE', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'ROPN1B', 'RUNDC3A', 'LOC100132215', 'CYP2E1', 'C1QL3', 'UCKL1.AS1', 'PNMA6A', 'LINC00961', 'CYTL1', 'FOLR1', 'RRN3P1', 'XCL1', 'SIGLEC6', 'LINC00689', 'RRN3P2', 'HBA1', 'ATP13A4', 'THSD7B', 'SLC2A14', 'ADRA2B', 'MT1L', 'ZMAT4', 'TMEM150B', 'IL1RL1', 'KISS1R', 'CCR10', 'KIF19', 'IL24', 'GLI1', 'GPR173', 'ARRDC3.AS1', 'DPEP1', 'LIN7A', 'TTLL9', 'PRRT4', 'NIPAL4', 'KIAA1210', 'GPR135', 'WBP2NL', 'A2ML1', 'RHBG', 'B3GALT5', 'PCDHB18P', 'GNMT', 'RRAD', 'CBLN1', 'FIGF', 'DPF3', 'LOC90246', 'OXGR1', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'MAP7D2', 'CACNA2D3', 'DPY19L2P4', 'MS4A8', 'SLC5A8', 'HIST1H1D', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PCDH20', 'GABRB2', 'DNAH11', 'TIFAB', 'PON3', 'KLK8', 'FOXN1', 'PHKG1', 'WFIKKN1', 'MASP2', 'CD19', 'GPR171', 'WNT10A', 'FREM2', 'LINC00669', 'ANK1', 'DCST2', 'C19ORF45', 'CRB2', 'CLCA2', 'KCNB1', 'SLC26A3', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'LINC01465', 'LINC00685', 'TYMSOS', 'RASAL1', 'CD1E', 'ANO2', 'RIC3', 'COLCA1', 'CST2', 'HNRNPCL3', 'NEURL3', 'LOC646999', 'MED12L', 'TTC41P', 'PCDHGC5', 'EYA1', 'STXBP6', 'RAB3B', 'CLPSL1', 'MYEOV', 'NRXN1', 'FAM182B', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'TDRD9', 'AJAP1', 'ZNF676', 'CR2', 'CLDN14', 'CXCR2', 'LPAR4', 'KIF4B', 'PATL2', 'FNDC8', 'CLEC4F', 'MSLN', 'KCNRG', 'MKX', 'ABHD1', 'C9ORF117', 'PDCD1', 'MAGEL2', 'NDP', 'VIT', 'HAPLN1', 'SEZ6L', 'DMRTC1B', 'POU3F1', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.9874437588013534e-15 NRMSE: 1.1947937134345826e-15 MAPE: 3.192858024582227e-12 Pearson Correlation: 0.20231145895327018 Spearman Correlation: 0.2119061554970247 Coefficient of Determination: -0.7261421152820489 RMSE: 0.30868019773593447 NRMSE: 0.21984516390514391 MAPE: 3637.5050126785013 Predictor: ElasticNet Pearson Correlation: 0.6223411377170543 Spearman Correlation: 0.6140094387077685 Coefficient of Determination: 0.2960970401673302 RMSE: 0.20042950309737295 NRMSE: 0.12049242109471629 MAPE: 325.84618916920635 Pearson Correlation: 0.29460272365697865 Spearman Correlation: 0.29176177933860115 Coefficient of Determination: 0.08569208081898683 RMSE: 0.22465533479616379 NRMSE: 0.16000180530750654 MAPE: 1442.690762700278 Predictor: RandomForests Pearson Correlation: 0.5375945412377063 Spearman Correlation: 0.555058344037475 Coefficient of Determination: 0.14987357078235386 RMSE: 0.2202657707262364 NRMSE: 0.13241741155344797 MAPE: 377.6650483273059 Pearson Correlation: 0.3339124855595173 Spearman Correlation: 0.3430640913081652 Coefficient of Determination: 0.08009725646186083 RMSE: 0.22534164088616415 NRMSE: 0.16049059945741279 MAPE: 1294.6184030822308 Protein: ERBB2 x_train_column_count: 1002 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'LINC01119', 'IQUB', 'NKPD1', 'LINC01341', 'SOX8', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'PPP1R3G', 'C19ORF18', 'FXYD1', 'RNF138P1', 'CCIN', 'MYCBPAP', 'ETV2', 'XPNPEP2', 'TEKT3', 'STKLD1', 'SLC30A8', 'UGT8', 'SLC28A3', 'CCR8', 'METTL7B', 'HEPACAM2', 'UBE2Q2P1', 'TEX14', 'PLP1', 'SLC25A18', 'JPH4', 'IDI2.AS1', 'CASQ1', 'S100A3', 'LINC00482', 'LRIT3', 'GLIS1', 'SGK2', 'CCDC36', 'NR1I3', 'ALOXE3', 'ZNF843', 'CACNG1', 'MS4A15', 'WNT2B', 'PBX4', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'LGALS2', 'PYGO1', 'TMEM92', 'FUT9', 'ADAMTS8', 'BCHE', 'AOC2', 'GJB1', 'C9ORF43', 'CCDC151', 'FCRL6', 'PNCK', 'PITX2', 'TNNI3K', 'FAM189A1', 'DQX1', 'LPAR3', 'CKMT2', 'ABCA17P', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'NLRP12', 'C1ORF101', 'CLDN9', 'IYD', 'ZNF835', 'SLC6A20', 'OTOA', 'CA3', 'SPIB', 'FAM95B1', 'FAM90A1', 'C1ORF95', 'C2CD4A', 'RYR2', 'PCDH9', 'CCDC158', 'CLEC3A', 'SCN2B', 'CLECL1', 'PCSK1N', 'ULBP3', 'SVOPL', 'LINC01550', 'GSDMC', 'ARC', 'TAS1R3', 'CCDC65', 'IL20RB', 'DDX11L2', 'VSIG1', 'AURKC', 'TTC16', 'ZCCHC18', 'PDE1C', 'ALDH8A1', 'COLCA2', 'PCYT1B', 'MYOZ1', 'BPIFB2', 'KNDC1', 'B3GALT5.AS1', 'DUOXA1', 'CRYGS', 'GSTM1', 'PPP1R36', 'KLHL4', 'LOC148709', 'LOC441455', 'CPEB1', 'OR7E91P', 'IL22RA1', 'HOXD3', 'TARP', 'FAM57B', 'LOC90768', 'CAMP', 'JPH3', 'LUZP2', 'FUT7', 'IL12RB2', 'PLA2G5', 'RIMS1', 'FLJ37201', 'LBX2', 'SCARA5', 'RELN', 'HOXB13', 'CD177', 'IGSF5', 'TUBB8', 'SLC22A18AS', 'HIST1H2BN', 'ZBED3.AS1', 'GPR18', 'ASTN1', 'ZC3H12D', 'KCNE1', 'MNX1', 'TCHH', 'CIDEA', 'ONECUT2', 'GAL', 'KCNE2', 'SP5', 'WDR72', 'BTBD8', 'CHRNA6', 'FAM135B', 'IRX4', 'C10ORF128', 'SLC16A10', 'RSPH4A', 'MGC16142', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'CCDC7', 'MGAT5B', 'YPEL4', 'GBP1P1', 'DCSTAMP', 'CELF5', 'CXXC4', 'GRIN2C', 'GPR3', 'SKIDA1', 'OBP2B', 'CXCR5', 'SLC35F1', 'PYDC1', 'SLC30A2', 'HOXA11', 'NIPAL1', 'ATP13A5', 'CCDC153', 'FOXJ1', 'STRC', 'SRL', 'WT1', 'PCSK9', 'PCAT18', 'TNFRSF9', 'LRP1B', 'RPGRIP1', 'INSM1', 'GPR174', 'CNNM1', 'PCK1', 'NOXO1', 'SLC18A2', 'C17ORF104', 'SLC25A53', 'FOXD4', 'DMRT3', 'PPP4R4', 'MARCO', 'GPX2', 'LBP', 'IL20', 'COL23A1', 'INHA', 'FOXD1', 'NOS2', 'PKNOX2', 'BTLA', 'TNFRSF17', 'CRISP3', 'ADH1C', 'KLHL14', 'AVPR2', 'CXCL2', 'GLOD5', 'MYBPC1', 'PARP15', 'GPLD1', 'PFN1P2', 'GPR55', 'CST9', 'SLCO4C1', 'STEAP1B', 'BCL2L14', 'SLC23A1', 'C2ORF40', 'DHRS4L1', 'SCN3A', 'AMH', 'CXCR2P1', 'ZNF98', 'VAT1L', 'ULBP2', 'VSIG2', 'ZNF454', 'RNF212', 'TPSG1', 'VGLL1', 'CYSLTR2', 'HAP1', 'P2RX1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'TMEM105', 'ORM1', 'FAM178B', 'DKK1', 'ZNF488', 'IL23A', 'DPY19L2P2', 'AMBP', 'PRKG2', 'CXCL1', 'SIGLEC17P', 'CRYM', 'SUCNR1', 'DEPDC4', 'SPDYE1', 'FABP7', 'LRRC2', 'GPBAR1', 'CTCFL', 'BRINP1', 'BDKRB1', 'LRGUK', 'XIRP1', 'ADAMTS18', 'VWDE', 'LINC00930', 'FUT6', 'RERGL', 'TENM1', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'KIAA0319', 'NUGGC', 'CECR2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'PKD1L1', 'SSUH2', 'WSCD2', 'CBLN2', 'ECEL1', 'SPESP1', 'SEC14L5', 'ABHD11.AS1', 'FSCN2', 'DMRT2', 'CCL17', 'ZNF732', 'FAM162B', 'PIANP', 'HOXD4', 'GNB3', 'TMEM217', 'CTSG', 'GRIA3', 'RSPO1', 'RGS6', 'SERPINA6', 'ADAMTS19', 'IL1R2', 'MT1A', 'RNF175', 'ADAM32', 'COL2A1', 'CHRNB2', 'FLJ12825', 'POM121L9P', 'PFKFB1', 'RASL10A', 'HECTD2.AS1', 'PRSS21', 'DIRC3', 'LRRC16B', 'CYP46A1', 'SMIM5', 'FOXC2', 'CAPN11', 'ZNF804A', 'IGF2BP3', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'CYSRT1', 'VIPR2', 'GPR87', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'SLC13A2', 'XKR9', 'CA9', 'HTR7', 'HOGA1', 'EMX1', 'WIPF3', 'CEP83.AS1', 'ZSCAN1', 'ZBTB16', 'CITED1', 'OTUD7A', 'TMEM40', 'CYP26A1', 'TMSB15A', 'WFDC3', 'MAPT.IT1', 'CDHR1', 'ANKK1', 'GZMM', 'ROPN1L', 'PVALB', 'FIRRE', 'M1AP', 'MYO3B', 'INE2', 'CRTAC1', 'MRAP2', 'IGSF22', 'RFX8', 'RBM12B.AS1', 'SPAG17', 'TTC23L', 'HEATR4', 'PYGM', 'MROH7', 'PCDHA12', 'CFAP61', 'BTC', 'KCNT2', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'B3GAT1', 'OPCML', 'SRSF12', 'NWD1', 'LRRC4B', 'CIDEC', 'CCBE1', 'ADGRF1', 'CLEC4E', 'MIA', 'LINC00173', 'TMEM59L', 'HPDL', 'TSPAN8', 'RNF182', 'FRMPD1', 'GALNT13', 'SMC1B', 'KCNA6', 'KLK6', 'LSAMP', 'LOC613037', 'ABCC6P2', 'FASLG', 'IL11', 'NLRP7', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'COL28A1', 'C15ORF56', 'FAM83A', 'PSORS1C1', 'ANO5', 'SLC16A11', 'PTCHD1', 'SLC6A14', 'SLC24A5', 'C9ORF47', 'ADGRG2', 'TMPRSS4', 'TUSC5', 'LINC00908', 'RUFY4', 'CYP4F12', 'INTS4P2', 'PIK3C2G', 'IGSF1', 'KCNQ3', 'LOC100133669', 'VENTX', 'MYOM2', 'FAM157A', 'NBPF4', 'EBF2', 'MAG', 'DSCAML1', 'PCDHA5', 'PTPRN', 'KLK7', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'SFTPA2', 'CNTN2', 'ZBTB20', 'FAM19A2', 'NKX3.2', 'DLX5', 'PLAC1', 'CCNI2', 'BRE.AS1', 'OR2W3', 'SLC6A17', 'RYR3', 'GHRLOS', 'ABCC2', 'PTPRR', 'ABCD2', 'TFAP2E', 'CD160', 'GRIA2', 'CD1A', 'DEFB1', 'CCDC144A', 'RGS9', 'DLK2', 'CACNA1I', 'GGT3P', 'CDKL2', 'MYO16', 'PWAR5', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'CABP4', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CHRNA10', 'TCEAL2', 'FKBP1AP1', 'UNC13A', 'AGBL4', 'SLC39A2', 'XCL2', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'ZNF727', 'LINC00202.1', 'KCNH3', 'ARL9', 'TM6SF2', 'MAK', 'SNORD116.4', 'TCN1', 'P2RY12', 'GRID2IP', 'MPL', 'HRCT1', 'PCBP3', 'SYCE3', 'TCTEX1D1', 'ELOVL3', 'GPM6A', 'CD70', 'NOX5', 'SLC46A2', 'SYCE2', 'GRIN2A', 'ARMC3', 'JAKMIP1', 'PGLYRP2', 'TIGD4', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'KLF3.AS1', 'SOSTDC1', 'ASIC3', 'LONRF3', 'LRRC43', 'AGAP7P', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'LOC400927', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'ACHE', 'CEACAM7', 'RIMS2', 'OLFM4', 'CTAGE11P', 'TMEM145', 'CD40LG', 'C6ORF52', 'HRC', 'BEGAIN', 'VN1R1', 'GPR82', 'CXADRP3', 'PAH', 'CHODL', 'TTBK1', 'LOC285593', 'MLLT4.AS1', 'CHST9', 'TTYH1', 'HIST1H2BH', 'APOBEC3A', 'GABRB3', 'ADGRL3', 'SLC25A34', 'BRSK2', 'TRH', 'MAPK4', 'CAMK4', 'DGCR5', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'EPYC', 'GBP6', 'MUC15', 'GPR63', 'CAPSL', 'SLC35F3', 'ANKLE1', 'IL17D', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'TNFSF11', 'RMRP', 'FAM201A', 'HAMP', 'MYO15A', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'PTX3', 'DCLK3', 'RHCE', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'ROPN1B', 'RUNDC3A', 'LOC100132215', 'CYP2E1', 'C1QL3', 'UCKL1.AS1', 'PNMA6A', 'LINC00961', 'CYTL1', 'FOLR1', 'RRN3P1', 'XCL1', 'SIGLEC6', 'LINC00689', 'RRN3P2', 'HBA1', 'ATP13A4', 'THSD7B', 'SLC2A14', 'ADRA2B', 'MT1L', 'ZMAT4', 'TMEM150B', 'IL1RL1', 'KISS1R', 'CCR10', 'KIF19', 'IL24', 'GLI1', 'GPR173', 'ARRDC3.AS1', 'DPEP1', 'LIN7A', 'TTLL9', 'PRRT4', 'NIPAL4', 'KIAA1210', 'GPR135', 'WBP2NL', 'A2ML1', 'RHBG', 'B3GALT5', 'PCDHB18P', 'GNMT', 'RRAD', 'CBLN1', 'FIGF', 'DPF3', 'LOC90246', 'OXGR1', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'MAP7D2', 'CACNA2D3', 'DPY19L2P4', 'MS4A8', 'SLC5A8', 'HIST1H1D', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PCDH20', 'GABRB2', 'DNAH11', 'TIFAB', 'PON3', 'KLK8', 'FOXN1', 'PHKG1', 'WFIKKN1', 'MASP2', 'CD19', 'GPR171', 'WNT10A', 'FREM2', 'LINC00669', 'ANK1', 'DCST2', 'C19ORF45', 'CRB2', 'CLCA2', 'KCNB1', 'SLC26A3', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'LINC01465', 'LINC00685', 'TYMSOS', 'RASAL1', 'CD1E', 'ANO2', 'RIC3', 'COLCA1', 'CST2', 'HNRNPCL3', 'NEURL3', 'LOC646999', 'MED12L', 'TTC41P', 'PCDHGC5', 'EYA1', 'STXBP6', 'RAB3B', 'CLPSL1', 'MYEOV', 'NRXN1', 'FAM182B', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'TDRD9', 'AJAP1', 'ZNF676', 'CR2', 'CLDN14', 'CXCR2', 'LPAR4', 'KIF4B', 'PATL2', 'FNDC8', 'CLEC4F', 'MSLN', 'KCNRG', 'MKX', 'ABHD1', 'C9ORF117', 'PDCD1', 'MAGEL2', 'NDP', 'VIT', 'HAPLN1', 'SEZ6L', 'DMRTC1B', 'POU3F1', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 4.926463923587111e-15 NRMSE: 8.393042103663068e-16 MAPE: 6.428838166421498e-12 Pearson Correlation: 0.4610175234418609 Spearman Correlation: 0.4880109257633402 Coefficient of Determination: -0.13896579091108197 RMSE: 0.9680148331676791 NRMSE: 0.1794946844368031 MAPE: 872.8918236530162 Predictor: ElasticNet Pearson Correlation: 0.926895203319511 Spearman Correlation: 0.8514541572521305 Coefficient of Determination: 0.8334696352232075 RMSE: 0.41589080715928706 NRMSE: 0.07085384383516825 MAPE: 556.5715659259613 Pearson Correlation: 0.6420494768940157 Spearman Correlation: 0.6323724514681495 Coefficient of Determination: 0.4031324092205393 RMSE: 0.7007541380796679 NRMSE: 0.1299377226181472 MAPE: 686.6240788523455 Predictor: RandomForests Pearson Correlation: 0.6330803990461317 Spearman Correlation: 0.5772742656758215 Coefficient of Determination: 0.3197786161304146 RMSE: 0.8405387589585925 NRMSE: 0.14319961138705428 MAPE: 671.6644353345745 Pearson Correlation: 0.3548496547539496 Spearman Correlation: 0.4440298507462687 Coefficient of Determination: 0.11975457829059344 RMSE: 0.8509980394816591 NRMSE: 0.15779678091630986 MAPE: 424.5806198999163 Protein: ERBB3 x_train_column_count: 1002 x_train columns: ['DES', 'SOX15', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'CATSPER3', 'C4ORF36', 'ALOX15', 'PCDHGA1', 'MST1L', 'NPTX1', 'TAT', 'TMEM200C', 'PPP2R2B', 'MUC6', 'ACTA1', 'CA14', 'LEP', 'ABCA10', 'MPZ', 'FIBCD1', 'C10ORF55', 'GRIK4', 'TUBA3E', 'CYP4F35P', 'GLDC', 'ANP32AP1', 'C1ORF228', 'FDCSP', 'LOC100272216', 'MOGAT2', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'BMX', 'FBLL1', 'CACNA1F', 'IRX6', 'PDE6G', 'CCL13', 'LOC399815', 'MAST1', 'SLC26A4', 'LRFN2', 'LINC00922', 'XKRX', 'FOXP2', 'PCDHA2', 'KIAA0125', 'CFAP57', 'C1ORF186', 'FOXF1', 'GIPR', 'ALG1L', 'ASB14', 'LINC01139', 'CADM2', 'TSSK4', 'HHIPL2', 'ZNF280B', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'PDZRN4', 'ASAH2B', 'MAT1A', 'RNASE2', 'TMEM35', 'LRFN5', 'C2CD4B', 'DNAJC5B', 'CERS1', 'HSD17B2', 'BRINP2', 'C10ORF95', 'WNK3', 'DNAI1', 'LGR5', 'FCGR3B', 'PTCHD2', 'PCDHAC1', 'GDF6', 'GPR141', 'LGALS12', 'GSDMA', 'TMEM151B', 'LINGO4', 'TMEM132C', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'KRT6A', 'HIST1H2AM', 'TLL2', 'DMC1', 'ESYT3', 'NFE2', 'PCP4L1', 'IL1RL2', 'AOC1', 'MYT1', 'C19ORF26', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'AQP5', 'KIF1A', 'HAND2.AS1', 'UMODL1', 'DYDC2', 'PRAME', 'DGKI', 'PQLC2L', 'ATP8A2', 'IQSEC3', 'TGM1', 'SPSB4', 'EPHA7', 'LOC644172', 'IGDCC3', 'PKD1L2', 'C2CD4C', 'GP1BA', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'UGT2B15', 'NBPF6', 'MGAM', 'PLA2G10', 'TMEM232', 'GPR27', 'CNTF', 'SLC25A21', 'MCHR1', 'KERA', 'PRSS12', 'PLEKHD1', 'CD244', 'PTCHD4', 'SLC6A4', 'LOC100130987', 'PNMT', 'DIO3', 'FCRL3', 'L1TD1', 'LINC00242', 'STAP1', 'CST4', 'IL10', 'RGN', 'LINC00839', 'DCANP1', 'PLCXD3', 'FCRLA', 'TBC1D3H', 'SNAP25', 'SPDYA', 'C6', 'TPSD1', 'PCDHGB3', 'GFRA2', 'FLG', 'IGFL2', 'GJB3', 'C1GALT1C1L', 'DLGAP1', 'GPR158', 'SFTPD', 'DNASE1L3', 'ITPKA', 'PROC', 'FAM186B', 'GDF10', 'NR6A1', 'TM4SF19', 'ZBED2', 'BCO2', 'PTH2R', 'ALOX12P2', 'C1ORF229', 'GUSBP5', 'HIST2H2BA', 'KCNG1', 'SLC17A7', 'FBXL13', 'PNPLA3', 'DOC2B', 'SULT4A1', 'BCAN', 'FAM86B2', 'PPM1N', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'FGF18', 'PRR34', 'HTR1D', 'EGOT', 'HCN2', 'LRRIQ3', 'ATP1A4', 'LCN12', 'NAALAD2', 'C10ORF82', 'KCNJ3', 'GJB5', 'ZNF660', 'RNF183', 'SLC7A4', 'LRRC31', 'ADRA1B', 'SYT8', 'PCDHA7', 'LRRIQ1', 'LTA', 'RAET1E', 'AURKAPS1', 'SLC38A4', 'TNFSF15', 'TRPA1', 'CNGA1', 'FBXO24', 'LY6G6C', 'C4ORF47', 'MAL', 'SCGB3A1', 'KLK11', 'GRM8', 'PTGDR', 'TUBA3D', 'ACSL6', 'RP1', 'RPL13AP3', 'LINC01119', 'IQUB', 'NKPD1', 'LINC01341', 'SOX8', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'PPP1R3G', 'C19ORF18', 'FXYD1', 'RNF138P1', 'CCIN', 'MYCBPAP', 'ETV2', 'XPNPEP2', 'TEKT3', 'STKLD1', 'SLC30A8', 'UGT8', 'SLC28A3', 'CCR8', 'METTL7B', 'HEPACAM2', 'UBE2Q2P1', 'TEX14', 'PLP1', 'SLC25A18', 'JPH4', 'IDI2.AS1', 'CASQ1', 'S100A3', 'LINC00482', 'LRIT3', 'GLIS1', 'SGK2', 'CCDC36', 'NR1I3', 'ALOXE3', 'ZNF843', 'CACNG1', 'MS4A15', 'WNT2B', 'PBX4', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'LGALS2', 'PYGO1', 'TMEM92', 'FUT9', 'ADAMTS8', 'BCHE', 'AOC2', 'GJB1', 'C9ORF43', 'CCDC151', 'FCRL6', 'PNCK', 'PITX2', 'TNNI3K', 'FAM189A1', 'DQX1', 'LPAR3', 'CKMT2', 'ABCA17P', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'NLRP12', 'C1ORF101', 'CLDN9', 'IYD', 'ZNF835', 'SLC6A20', 'OTOA', 'CA3', 'SPIB', 'FAM95B1', 'FAM90A1', 'C1ORF95', 'C2CD4A', 'RYR2', 'PCDH9', 'CCDC158', 'CLEC3A', 'SCN2B', 'CLECL1', 'PCSK1N', 'ULBP3', 'SVOPL', 'LINC01550', 'GSDMC', 'ARC', 'TAS1R3', 'CCDC65', 'IL20RB', 'DDX11L2', 'VSIG1', 'AURKC', 'TTC16', 'ZCCHC18', 'PDE1C', 'ALDH8A1', 'COLCA2', 'PCYT1B', 'MYOZ1', 'BPIFB2', 'KNDC1', 'B3GALT5.AS1', 'DUOXA1', 'CRYGS', 'GSTM1', 'PPP1R36', 'KLHL4', 'LOC148709', 'LOC441455', 'CPEB1', 'OR7E91P', 'IL22RA1', 'HOXD3', 'TARP', 'FAM57B', 'LOC90768', 'CAMP', 'JPH3', 'LUZP2', 'FUT7', 'IL12RB2', 'PLA2G5', 'RIMS1', 'FLJ37201', 'LBX2', 'SCARA5', 'RELN', 'HOXB13', 'CD177', 'IGSF5', 'TUBB8', 'SLC22A18AS', 'HIST1H2BN', 'ZBED3.AS1', 'GPR18', 'ASTN1', 'ZC3H12D', 'KCNE1', 'MNX1', 'TCHH', 'CIDEA', 'ONECUT2', 'GAL', 'KCNE2', 'SP5', 'WDR72', 'BTBD8', 'CHRNA6', 'FAM135B', 'IRX4', 'C10ORF128', 'SLC16A10', 'RSPH4A', 'MGC16142', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'CCDC7', 'MGAT5B', 'YPEL4', 'GBP1P1', 'DCSTAMP', 'CELF5', 'CXXC4', 'GRIN2C', 'GPR3', 'SKIDA1', 'OBP2B', 'CXCR5', 'SLC35F1', 'PYDC1', 'SLC30A2', 'HOXA11', 'NIPAL1', 'ATP13A5', 'CCDC153', 'FOXJ1', 'STRC', 'SRL', 'WT1', 'PCSK9', 'PCAT18', 'TNFRSF9', 'LRP1B', 'RPGRIP1', 'INSM1', 'GPR174', 'CNNM1', 'PCK1', 'NOXO1', 'SLC18A2', 'C17ORF104', 'SLC25A53', 'FOXD4', 'DMRT3', 'PPP4R4', 'MARCO', 'GPX2', 'LBP', 'IL20', 'COL23A1', 'INHA', 'FOXD1', 'NOS2', 'PKNOX2', 'BTLA', 'TNFRSF17', 'CRISP3', 'ADH1C', 'KLHL14', 'AVPR2', 'CXCL2', 'GLOD5', 'MYBPC1', 'PARP15', 'GPLD1', 'PFN1P2', 'GPR55', 'CST9', 'SLCO4C1', 'STEAP1B', 'BCL2L14', 'SLC23A1', 'C2ORF40', 'DHRS4L1', 'SCN3A', 'AMH', 'CXCR2P1', 'ZNF98', 'VAT1L', 'ULBP2', 'VSIG2', 'ZNF454', 'RNF212', 'TPSG1', 'VGLL1', 'CYSLTR2', 'HAP1', 'P2RX1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'TMEM105', 'ORM1', 'FAM178B', 'DKK1', 'ZNF488', 'IL23A', 'DPY19L2P2', 'AMBP', 'PRKG2', 'CXCL1', 'SIGLEC17P', 'CRYM', 'SUCNR1', 'DEPDC4', 'SPDYE1', 'FABP7', 'LRRC2', 'GPBAR1', 'CTCFL', 'BRINP1', 'BDKRB1', 'LRGUK', 'XIRP1', 'ADAMTS18', 'VWDE', 'LINC00930', 'FUT6', 'RERGL', 'TENM1', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'KIAA0319', 'NUGGC', 'CECR2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'PKD1L1', 'SSUH2', 'WSCD2', 'CBLN2', 'ECEL1', 'SPESP1', 'SEC14L5', 'ABHD11.AS1', 'FSCN2', 'DMRT2', 'CCL17', 'ZNF732', 'FAM162B', 'PIANP', 'HOXD4', 'GNB3', 'TMEM217', 'CTSG', 'GRIA3', 'RSPO1', 'RGS6', 'SERPINA6', 'ADAMTS19', 'IL1R2', 'MT1A', 'RNF175', 'ADAM32', 'COL2A1', 'CHRNB2', 'FLJ12825', 'POM121L9P', 'PFKFB1', 'RASL10A', 'HECTD2.AS1', 'PRSS21', 'DIRC3', 'LRRC16B', 'CYP46A1', 'SMIM5', 'FOXC2', 'CAPN11', 'ZNF804A', 'IGF2BP3', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'CYSRT1', 'VIPR2', 'GPR87', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'SLC13A2', 'XKR9', 'CA9', 'HTR7', 'HOGA1', 'EMX1', 'WIPF3', 'CEP83.AS1', 'ZSCAN1', 'ZBTB16', 'CITED1', 'OTUD7A', 'TMEM40', 'CYP26A1', 'TMSB15A', 'WFDC3', 'MAPT.IT1', 'CDHR1', 'ANKK1', 'GZMM', 'ROPN1L', 'PVALB', 'FIRRE', 'M1AP', 'MYO3B', 'INE2', 'CRTAC1', 'MRAP2', 'IGSF22', 'RFX8', 'RBM12B.AS1', 'SPAG17', 'TTC23L', 'HEATR4', 'PYGM', 'MROH7', 'PCDHA12', 'CFAP61', 'BTC', 'KCNT2', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'B3GAT1', 'OPCML', 'SRSF12', 'NWD1', 'LRRC4B', 'CIDEC', 'CCBE1', 'ADGRF1', 'CLEC4E', 'MIA', 'LINC00173', 'TMEM59L', 'HPDL', 'TSPAN8', 'RNF182', 'FRMPD1', 'GALNT13', 'SMC1B', 'KCNA6', 'KLK6', 'LSAMP', 'LOC613037', 'ABCC6P2', 'FASLG', 'IL11', 'NLRP7', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'COL28A1', 'C15ORF56', 'FAM83A', 'PSORS1C1', 'ANO5', 'SLC16A11', 'PTCHD1', 'SLC6A14', 'SLC24A5', 'C9ORF47', 'ADGRG2', 'TMPRSS4', 'TUSC5', 'LINC00908', 'RUFY4', 'CYP4F12', 'INTS4P2', 'PIK3C2G', 'IGSF1', 'KCNQ3', 'LOC100133669', 'VENTX', 'MYOM2', 'FAM157A', 'NBPF4', 'EBF2', 'MAG', 'DSCAML1', 'PCDHA5', 'PTPRN', 'KLK7', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'SFTPA2', 'CNTN2', 'ZBTB20', 'FAM19A2', 'NKX3.2', 'DLX5', 'PLAC1', 'CCNI2', 'BRE.AS1', 'OR2W3', 'SLC6A17', 'RYR3', 'GHRLOS', 'ABCC2', 'PTPRR', 'ABCD2', 'TFAP2E', 'CD160', 'GRIA2', 'CD1A', 'DEFB1', 'CCDC144A', 'RGS9', 'DLK2', 'CACNA1I', 'GGT3P', 'CDKL2', 'MYO16', 'PWAR5', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'CABP4', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CHRNA10', 'TCEAL2', 'FKBP1AP1', 'UNC13A', 'AGBL4', 'SLC39A2', 'XCL2', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'ZNF727', 'LINC00202.1', 'KCNH3', 'ARL9', 'TM6SF2', 'MAK', 'SNORD116.4', 'TCN1', 'P2RY12', 'GRID2IP', 'MPL', 'HRCT1', 'PCBP3', 'SYCE3', 'TCTEX1D1', 'ELOVL3', 'GPM6A', 'CD70', 'NOX5', 'SLC46A2', 'SYCE2', 'GRIN2A', 'ARMC3', 'JAKMIP1', 'PGLYRP2', 'TIGD4', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'KLF3.AS1', 'SOSTDC1', 'ASIC3', 'LONRF3', 'LRRC43', 'AGAP7P', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'LOC400927', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'ACHE', 'CEACAM7', 'RIMS2', 'OLFM4', 'CTAGE11P', 'TMEM145', 'CD40LG', 'C6ORF52', 'HRC', 'BEGAIN', 'VN1R1', 'GPR82', 'CXADRP3', 'PAH', 'CHODL', 'TTBK1', 'LOC285593', 'MLLT4.AS1', 'CHST9', 'TTYH1', 'HIST1H2BH', 'APOBEC3A', 'GABRB3', 'ADGRL3', 'SLC25A34', 'BRSK2', 'TRH', 'MAPK4', 'CAMK4', 'DGCR5', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'EPYC', 'GBP6', 'MUC15', 'GPR63', 'CAPSL', 'SLC35F3', 'ANKLE1', 'IL17D', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'TNFSF11', 'RMRP', 'FAM201A', 'HAMP', 'MYO15A', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'PTX3', 'DCLK3', 'RHCE', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'ROPN1B', 'RUNDC3A', 'LOC100132215', 'CYP2E1', 'C1QL3', 'UCKL1.AS1', 'PNMA6A', 'LINC00961', 'CYTL1', 'FOLR1', 'RRN3P1', 'XCL1', 'SIGLEC6', 'LINC00689', 'RRN3P2', 'HBA1', 'ATP13A4', 'THSD7B', 'SLC2A14', 'ADRA2B', 'MT1L', 'ZMAT4', 'TMEM150B', 'IL1RL1', 'KISS1R', 'CCR10', 'KIF19', 'IL24', 'GLI1', 'GPR173', 'ARRDC3.AS1', 'DPEP1', 'LIN7A', 'TTLL9', 'PRRT4', 'NIPAL4', 'KIAA1210', 'GPR135', 'WBP2NL', 'A2ML1', 'RHBG', 'B3GALT5', 'PCDHB18P', 'GNMT', 'RRAD', 'CBLN1', 'FIGF', 'DPF3', 'LOC90246', 'OXGR1', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'MAP7D2', 'CACNA2D3', 'DPY19L2P4', 'MS4A8', 'SLC5A8', 'HIST1H1D', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PCDH20', 'GABRB2', 'DNAH11', 'TIFAB', 'PON3', 'KLK8', 'FOXN1', 'PHKG1', 'WFIKKN1', 'MASP2', 'CD19', 'GPR171', 'WNT10A', 'FREM2', 'LINC00669', 'ANK1', 'DCST2', 'C19ORF45', 'CRB2', 'CLCA2', 'KCNB1', 'SLC26A3', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'LINC01465', 'LINC00685', 'TYMSOS', 'RASAL1', 'CD1E', 'ANO2', 'RIC3', 'COLCA1', 'CST2', 'HNRNPCL3', 'NEURL3', 'LOC646999', 'MED12L', 'TTC41P', 'PCDHGC5', 'EYA1', 'STXBP6', 'RAB3B', 'CLPSL1', 'MYEOV', 'NRXN1', 'FAM182B', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'TDRD9', 'AJAP1', 'ZNF676', 'CR2', 'CLDN14', 'CXCR2', 'LPAR4', 'KIF4B', 'PATL2', 'FNDC8', 'CLEC4F', 'MSLN', 'KCNRG', 'MKX', 'ABHD1', 'C9ORF117', 'PDCD1', 'MAGEL2', 'NDP', 'VIT', 'HAPLN1', 'SEZ6L', 'DMRTC1B', 'POU3F1', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 3.834803933664636e-15 NRMSE: 1.034903516602384e-15 MAPE: 2.898452820924736e-12 Pearson Correlation: 0.35546120519846247 Spearman Correlation: 0.3390600173888207 Coefficient of Determination: -0.4146610155417534 RMSE: 0.5536861728697343 NRMSE: 0.2221711980248998 MAPE: 450.9165235156914 Predictor: ElasticNet Pearson Correlation: 0.8033216905705629 Spearman Correlation: 0.7969873999062733 Coefficient of Determination: 0.5756367541454007 RMSE: 0.2990971258060808 NRMSE: 0.0807177296823563 MAPE: 165.3521465021318 Pearson Correlation: 0.3449810969490169 Spearman Correlation: 0.3588581100116193 Coefficient of Determination: 0.08964965644315603 RMSE: 0.4441623737627799 NRMSE: 0.17822385952859363 MAPE: 320.5469860406081 Predictor: RandomForests Pearson Correlation: 0.5220995171727433 Spearman Correlation: 0.5433204818408822 Coefficient of Determination: 0.21274143721754113 RMSE: 0.40738220536214925 NRMSE: 0.10994076469709625 MAPE: 204.4591934172639 Pearson Correlation: 0.37801379757858855 Spearman Correlation: 0.39041848407316615 Coefficient of Determination: 0.11821473109217417 RMSE: 0.43713834617033737 NRMSE: 0.17540540983337238 MAPE: 234.03073427967328 Fold: 2 Protein: RB1 x_train_column_count: 1002 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'IQUB', 'LINC01119', 'CBLN4', 'NKPD1', 'LINC01341', 'SOX8', 'EYS', 'ECT2L', 'PAX2', 'FXYD1', 'PPP1R3G', 'RNF138P1', 'CCR8', 'CCIN', 'MYCBPAP', 'XPNPEP2', 'ETV2', 'TEKT3', 'STKLD1', 'SLC30A8', 'C19ORF18', 'UGT8', 'SLC28A3', 'JPH4', 'UBE2Q2P1', 'METTL7B', 'SLC25A18', 'HEPACAM2', 'CASQ1', 'PLP1', 'TEX14', 'IDI2.AS1', 'S100A3', 'GLIS1', 'SGK2', 'ZNF843', 'LRIT3', 'CCDC36', 'NR1I3', 'LINC00482', 'ALOXE3', 'CACNG1', 'WNT2B', 'MS4A15', 'PBX4', 'ZIC2', 'ST6GALNAC1', 'GTSE1.AS1', 'ADAMTS8', 'PYGO1', 'LGALS2', 'TMEM92', 'FUT9', 'FCRL6', 'CCDC151', 'C9ORF43', 'PITX2', 'BCHE', 'PNCK', 'TNNI3K', 'AOC2', 'GJB1', 'DQX1', 'CKMT2', 'LPAR3', 'FAM189A1', 'ABCA17P', 'CACNA1G', 'C2ORF50', 'C1ORF101', 'NLRP12', 'ADCYAP1', 'ENPP6', 'SLC6A20', 'IYD', 'ZNF835', 'OTOA', 'CA3', 'SPIB', 'CLDN9', 'FAM95B1', 'FAM90A1', 'RYR2', 'C2CD4A', 'C1ORF95', 'PCDH9', 'LINC01550', 'CLEC3A', 'SVOPL', 'CCDC158', 'SCN2B', 'VSIG1', 'CLECL1', 'PCSK1N', 'IL20RB', 'ARC', 'CCDC65', 'TAS1R3', 'GSDMC', 'TTC16', 'AURKC', 'ZCCHC18', 'ULBP3', 'DDX11L2', 'DUOXA1', 'B3GALT5.AS1', 'ALDH8A1', 'KNDC1', 'COLCA2', 'GSTM1', 'PCYT1B', 'BPIFB2', 'MYOZ1', 'PDE1C', 'CRYGS', 'PPP1R36', 'TARP', 'KLHL4', 'LOC148709', 'LUZP2', 'LOC441455', 'JPH3', 'CPEB1', 'IL22RA1', 'HOXD3', 'FAM57B', 'LOC90768', 'CAMP', 'OR7E91P', 'FLJ37201', 'RIMS1', 'IL12RB2', 'RELN', 'LBX2', 'FUT7', 'SCARA5', 'PLA2G5', 'KCNE1', 'IGSF5', 'TUBB8', 'HIST1H2BN', 'GPR18', 'ZBED3.AS1', 'SLC22A18AS', 'HOXB13', 'CD177', 'ZC3H12D', 'MNX1', 'ASTN1', 'CIDEA', 'TCHH', 'ONECUT2', 'C10ORF128', 'GAL', 'SP5', 'WDR72', 'CHRNA6', 'KCNE2', 'IRX4', 'FAM135B', 'BTBD8', 'SLC16A10', 'RSPH4A', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'MGC16142', 'CCDC7', 'DCSTAMP', 'CELF5', 'GRIN2C', 'MGAT5B', 'GBP1P1', 'CXXC4', 'YPEL4', 'GPR3', 'CXCR5', 'HOXA11', 'SLC30A2', 'OBP2B', 'SLC35F1', 'ATP13A5', 'NIPAL1', 'PYDC1', 'SKIDA1', 'CCDC153', 'RPGRIP1', 'SRL', 'STRC', 'WT1', 'TNFRSF9', 'LRP1B', 'PCSK9', 'PCAT18', 'FOXJ1', 'SLC18A2', 'PPP4R4', 'NOXO1', 'PCK1', 'INSM1', 'CNNM1', 'GPR174', 'MARCO', 'SLC25A53', 'C17ORF104', 'FOXD4', 'DMRT3', 'GPX2', 'INHA', 'COL23A1', 'NOS2', 'ADH1C', 'FOXD1', 'PKNOX2', 'KLHL14', 'BTLA', 'CRISP3', 'LBP', 'IL20', 'TNFRSF17', 'AVPR2', 'GLOD5', 'MYBPC1', 'PARP15', 'CXCL2', 'GPLD1', 'PFN1P2', 'CST9', 'GPR55', 'SLCO4C1', 'SLC23A1', 'STEAP1B', 'C2ORF40', 'BCL2L14', 'DHRS4L1', 'SCN3A', 'AMH', 'ULBP2', 'CXCR2P1', 'VAT1L', 'ZNF98', 'VSIG2', 'RNF212', 'VGLL1', 'HAP1', 'CYSLTR2', 'ZNF454', 'TPSG1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'ORM1', 'ZNF488', 'TMEM105', 'FAM178B', 'P2RX1', 'DKK1', 'DPY19L2P2', 'IL23A', 'SIGLEC17P', 'CRYM', 'PRKG2', 'CXCL1', 'AMBP', 'BRINP1', 'CTCFL', 'SUCNR1', 'DEPDC4', 'FABP7', 'SPDYE1', 'LRRC2', 'GPBAR1', 'XIRP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'FUT6', 'RERGL', 'BDKRB1', 'TENM1', 'LINC00930', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'NUGGC', 'KIAA0319', 'CECR2', 'SORCS1', 'ABHD11.AS1', 'PCDHGA3', 'PKD1L1', 'FAM184B', 'ECEL1', 'CBLN2', 'WSCD2', 'SPESP1', 'SEC14L5', 'SSUH2', 'FSCN2', 'DMRT2', 'FAM162B', 'CCL17', 'ZNF732', 'HOXD4', 'PIANP', 'TMEM217', 'GRIA3', 'CTSG', 'GNB3', 'RSPO1', 'RGS6', 'COL2A1', 'SERPINA6', 'MT1A', 'ADAMTS19', 'IL1R2', 'RNF175', 'CHRNB2', 'ADAM32', 'FLJ12825', 'RASL10A', 'PFKFB1', 'POM121L9P', 'HECTD2.AS1', 'DIRC3', 'PRSS21', 'SMIM5', 'CYP46A1', 'LRRC16B', 'CAPN11', 'IGF2BP3', 'VIPR2', 'TRAT1', 'ZNF804A', 'TBX21', 'HIST1H2BE', 'GPR87', 'LOC100126784', 'CYSRT1', 'PART1', 'FOXC2', 'HOGA1', 'EMX1', 'CA9', 'ZSCAN1', 'HTR7', 'CEP83.AS1', 'SLC13A2', 'XKR9', 'WIPF3', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'OTUD7A', 'CITED1', 'ZBTB16', 'CYP26A1', 'TMEM40', 'TMSB15A', 'PVALB', 'ANKK1', 'WFDC3', 'MAPT.IT1', 'ROPN1L', 'MYO3B', 'GZMM', 'CDHR1', 'FIRRE', 'M1AP', 'MRAP2', 'INE2', 'RFX8', 'TTC23L', 'IGSF22', 'CRTAC1', 'RBM12B.AS1', 'SPAG17', 'MROH7', 'KCNT2', 'PYGM', 'PCDHA12', 'CFAP61', 'BTC', 'HEATR4', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'NWD1', 'CLEC4E', 'LRRC4B', 'SRSF12', 'B3GAT1', 'CCBE1', 'OPCML', 'ADGRF1', 'MIA', 'LINC00173', 'TMEM59L', 'CIDEC', 'HPDL', 'NLRP7', 'RNF182', 'FRMPD1', 'SMC1B', 'KCNA6', 'KLK6', 'ABCC6P2', 'FASLG', 'IL11', 'LOC613037', 'LSAMP', 'GALNT13', 'TSPAN8', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'C15ORF56', 'FAM83A', 'COL28A1', 'PSORS1C1', 'ANO5', 'SLC6A14', 'SLC16A11', 'PTCHD1', 'TMPRSS4', 'C9ORF47', 'ADGRG2', 'SLC24A5', 'TUSC5', 'CYP4F12', 'LOC100133669', 'RUFY4', 'LINC00908', 'KCNQ3', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'VENTX', 'NBPF4', 'MYOM2', 'FAM157A', 'EBF2', 'MAG', 'DSCAML1', 'PTPRN', 'PCDHA5', 'KLK7', 'CCNI2', 'CDKN2B.AS1', 'SYT6', 'DLX2', 'SFTPA2', 'ZBTB20', 'NKX3.2', 'DLX5', 'FAM19A2', 'PLAC1', 'BRE.AS1', 'CNTN2', 'OR2W3', 'SLC6A17', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'TFAP2E', 'CD160', 'ABCD2', 'CD1A', 'GRIA2', 'CCDC144A', 'DEFB1', 'RGS9', 'CACNA1I', 'GGT3P', 'DLK2', 'MYO16', 'PWAR5', 'CDKL2', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CABP4', 'CHRNA10', 'TCEAL2', 'UNC13A', 'FKBP1AP1', 'LY6H', 'AGBL4', 'SLC39A2', 'XCL2', 'TUBAL3', 'S100A7', 'SPAG8', 'PCBP3', 'MPL', 'KCNH3', 'LINC00202.1', 'ARL9', 'TM6SF2', 'ZNF727', 'GRID2IP', 'P2RY12', 'MAK', 'TCN1', 'HRCT1', 'SNORD116.4', 'ELOVL3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'GPM6A', 'CD70', 'SYCE3', 'SYCE2', 'PGLYRP2', 'TIGD4', 'GRIN2A', 'JAKMIP1', 'ARMC3', 'BAIAP2L2', 'RAB9B', 'CTAGE6', 'MKRN3', 'SOSTDC1', 'ASIC3', 'KLF3.AS1', 'LONRF3', 'AGAP7P', 'LRRC43', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'LOC400927', 'ACHE', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'HRC', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'GPR82', 'CHODL', 'CXADRP3', 'TTBK1', 'LOC285593', 'PAH', 'TTYH1', 'HIST1H2BH', 'ADGRL3', 'MLLT4.AS1', 'APOBEC3A', 'CHST9', 'GABRB3', 'SLC25A34', 'MAPK4', 'BRSK2', 'TRH', 'DNASE1L2', 'C8ORF46', 'ST8SIA2', 'CAMK4', 'DGCR5', 'EPYC', 'GBP6', 'GPR63', 'CAPSL', 'MUC15', 'ANKLE1', 'IL17D', 'SLC35F3', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'HAMP', 'MYO15A', 'RMRP', 'FAM201A', 'TNFSF11', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'RHCE', 'DCLK3', 'PTX3', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'RUNDC3A', 'ROPN1B', 'CYP2E1', 'LOC100132215', 'KCNK17', 'FOLR1', 'RRN3P1', 'UCKL1.AS1', 'LINC00961', 'C1QL3', 'PNMA6A', 'CYTL1', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'THSD7B', 'ATP13A4', 'MT1L', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'LIN7A', 'IL1RL1', 'CCR10', 'KISS1R', 'TMEM150B', 'ZMAT4', 'IL24', 'KIF19', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'DPEP1', 'TTLL9', 'WBP2NL', 'A2ML1', 'NIPAL4', 'PRRT4', 'RHBG', 'GPR135', 'KIAA1210', 'LOC90246', 'CNTNAP3', 'RRAD', 'CD300LB', 'PCDHB18P', 'CBLN1', 'B3GALT5', 'GNMT', 'FIGF', 'OXGR1', 'DPF3', 'IL18RAP', 'MAP7D2', 'SLC5A8', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'LRRC24', 'AIM2', 'RAB39A', 'TRIM7', 'PCDH20', 'GABRB2', 'FOXN1', 'TIFAB', 'PHKG1', 'PON3', 'DNAH11', 'MASP2', 'KLK8', 'WFIKKN1', 'CD19', 'CRB2', 'GPR171', 'FREM2', 'DCST2', 'WNT10A', 'LINC00669', 'C19ORF45', 'CLCA2', 'ANK1', 'SLC26A3', 'KCNB1', 'SEPHS1P1', 'HIST1H2AG', 'LINC01465', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'NEURL3', 'RIC3', 'COLCA1', 'CD1E', 'HNRNPCL3', 'TTC41P', 'ANO2', 'MED12L', 'LOC646999', 'CST2', 'PCDHGC5', 'EYA1', 'NRXN1', 'RAB3B', 'MYEOV', 'FAM182B', 'IL6', 'SEC14L1P1', 'CLPSL1', 'STXBP6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'LPAR4', 'CXCR2', 'KIF4B', 'MSLN', 'CR2', 'FNDC8', 'AJAP1', 'CLDN14', 'PATL2', 'TDRD9', 'ZNF676', 'CLEC4F', 'KCNRG', 'C9ORF117', 'FAM43B', 'HAPLN1', 'ABHD1', 'MAGEL2', 'NDP', 'VIT', 'TRABD2A', 'PDCD1', 'TSPAN32', 'MKX', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 1.124348250757284e-15 NRMSE: 4.1118645800076213e-16 MAPE: 5.906360163359438e-12 Pearson Correlation: 0.026211723398341016 Spearman Correlation: 0.14881962735342893 Coefficient of Determination: -1.1021416717832628 RMSE: 0.35508059186586244 NRMSE: 0.20343561541970553 MAPE: 1027.9406776062815 Predictor: ElasticNet Pearson Correlation: 0.6176167973729273 Spearman Correlation: 0.5553567958012682 Coefficient of Determination: 0.288712236429858 RMSE: 0.198228707709752 NRMSE: 0.07249440744212698 MAPE: 262.0301478409387 Pearson Correlation: 0.09883380525760568 Spearman Correlation: 0.19163984001560824 Coefficient of Determination: -0.03630042857605842 RMSE: 0.249309474460805 NRMSE: 0.14283638004652463 MAPE: 333.0700670909676 Predictor: RandomForests Pearson Correlation: 0.49387094887807914 Spearman Correlation: 0.4629300487242092 Coefficient of Determination: 0.145671391438839 RMSE: 0.21724828453744643 NRMSE: 0.07945007480158223 MAPE: 176.21103392691725 Pearson Correlation: 0.22759086539900683 Spearman Correlation: 0.29481513998634284 Coefficient of Determination: 0.03603693154193843 RMSE: 0.24045075333973437 NRMSE: 0.13776097062009968 MAPE: 217.4734223724172 Protein: CDH1 x_train_column_count: 1002 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'IQUB', 'LINC01119', 'CBLN4', 'NKPD1', 'LINC01341', 'SOX8', 'EYS', 'ECT2L', 'PAX2', 'FXYD1', 'PPP1R3G', 'RNF138P1', 'CCR8', 'CCIN', 'MYCBPAP', 'XPNPEP2', 'ETV2', 'TEKT3', 'STKLD1', 'SLC30A8', 'C19ORF18', 'UGT8', 'SLC28A3', 'JPH4', 'UBE2Q2P1', 'METTL7B', 'SLC25A18', 'HEPACAM2', 'CASQ1', 'PLP1', 'TEX14', 'IDI2.AS1', 'S100A3', 'GLIS1', 'SGK2', 'ZNF843', 'LRIT3', 'CCDC36', 'NR1I3', 'LINC00482', 'ALOXE3', 'CACNG1', 'WNT2B', 'MS4A15', 'PBX4', 'ZIC2', 'ST6GALNAC1', 'GTSE1.AS1', 'ADAMTS8', 'PYGO1', 'LGALS2', 'TMEM92', 'FUT9', 'FCRL6', 'CCDC151', 'C9ORF43', 'PITX2', 'BCHE', 'PNCK', 'TNNI3K', 'AOC2', 'GJB1', 'DQX1', 'CKMT2', 'LPAR3', 'FAM189A1', 'ABCA17P', 'CACNA1G', 'C2ORF50', 'C1ORF101', 'NLRP12', 'ADCYAP1', 'ENPP6', 'SLC6A20', 'IYD', 'ZNF835', 'OTOA', 'CA3', 'SPIB', 'CLDN9', 'FAM95B1', 'FAM90A1', 'RYR2', 'C2CD4A', 'C1ORF95', 'PCDH9', 'LINC01550', 'CLEC3A', 'SVOPL', 'CCDC158', 'SCN2B', 'VSIG1', 'CLECL1', 'PCSK1N', 'IL20RB', 'ARC', 'CCDC65', 'TAS1R3', 'GSDMC', 'TTC16', 'AURKC', 'ZCCHC18', 'ULBP3', 'DDX11L2', 'DUOXA1', 'B3GALT5.AS1', 'ALDH8A1', 'KNDC1', 'COLCA2', 'GSTM1', 'PCYT1B', 'BPIFB2', 'MYOZ1', 'PDE1C', 'CRYGS', 'PPP1R36', 'TARP', 'KLHL4', 'LOC148709', 'LUZP2', 'LOC441455', 'JPH3', 'CPEB1', 'IL22RA1', 'HOXD3', 'FAM57B', 'LOC90768', 'CAMP', 'OR7E91P', 'FLJ37201', 'RIMS1', 'IL12RB2', 'RELN', 'LBX2', 'FUT7', 'SCARA5', 'PLA2G5', 'KCNE1', 'IGSF5', 'TUBB8', 'HIST1H2BN', 'GPR18', 'ZBED3.AS1', 'SLC22A18AS', 'HOXB13', 'CD177', 'ZC3H12D', 'MNX1', 'ASTN1', 'CIDEA', 'TCHH', 'ONECUT2', 'C10ORF128', 'GAL', 'SP5', 'WDR72', 'CHRNA6', 'KCNE2', 'IRX4', 'FAM135B', 'BTBD8', 'SLC16A10', 'RSPH4A', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'MGC16142', 'CCDC7', 'DCSTAMP', 'CELF5', 'GRIN2C', 'MGAT5B', 'GBP1P1', 'CXXC4', 'YPEL4', 'GPR3', 'CXCR5', 'HOXA11', 'SLC30A2', 'OBP2B', 'SLC35F1', 'ATP13A5', 'NIPAL1', 'PYDC1', 'SKIDA1', 'CCDC153', 'RPGRIP1', 'SRL', 'STRC', 'WT1', 'TNFRSF9', 'LRP1B', 'PCSK9', 'PCAT18', 'FOXJ1', 'SLC18A2', 'PPP4R4', 'NOXO1', 'PCK1', 'INSM1', 'CNNM1', 'GPR174', 'MARCO', 'SLC25A53', 'C17ORF104', 'FOXD4', 'DMRT3', 'GPX2', 'INHA', 'COL23A1', 'NOS2', 'ADH1C', 'FOXD1', 'PKNOX2', 'KLHL14', 'BTLA', 'CRISP3', 'LBP', 'IL20', 'TNFRSF17', 'AVPR2', 'GLOD5', 'MYBPC1', 'PARP15', 'CXCL2', 'GPLD1', 'PFN1P2', 'CST9', 'GPR55', 'SLCO4C1', 'SLC23A1', 'STEAP1B', 'C2ORF40', 'BCL2L14', 'DHRS4L1', 'SCN3A', 'AMH', 'ULBP2', 'CXCR2P1', 'VAT1L', 'ZNF98', 'VSIG2', 'RNF212', 'VGLL1', 'HAP1', 'CYSLTR2', 'ZNF454', 'TPSG1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'ORM1', 'ZNF488', 'TMEM105', 'FAM178B', 'P2RX1', 'DKK1', 'DPY19L2P2', 'IL23A', 'SIGLEC17P', 'CRYM', 'PRKG2', 'CXCL1', 'AMBP', 'BRINP1', 'CTCFL', 'SUCNR1', 'DEPDC4', 'FABP7', 'SPDYE1', 'LRRC2', 'GPBAR1', 'XIRP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'FUT6', 'RERGL', 'BDKRB1', 'TENM1', 'LINC00930', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'NUGGC', 'KIAA0319', 'CECR2', 'SORCS1', 'ABHD11.AS1', 'PCDHGA3', 'PKD1L1', 'FAM184B', 'ECEL1', 'CBLN2', 'WSCD2', 'SPESP1', 'SEC14L5', 'SSUH2', 'FSCN2', 'DMRT2', 'FAM162B', 'CCL17', 'ZNF732', 'HOXD4', 'PIANP', 'TMEM217', 'GRIA3', 'CTSG', 'GNB3', 'RSPO1', 'RGS6', 'COL2A1', 'SERPINA6', 'MT1A', 'ADAMTS19', 'IL1R2', 'RNF175', 'CHRNB2', 'ADAM32', 'FLJ12825', 'RASL10A', 'PFKFB1', 'POM121L9P', 'HECTD2.AS1', 'DIRC3', 'PRSS21', 'SMIM5', 'CYP46A1', 'LRRC16B', 'CAPN11', 'IGF2BP3', 'VIPR2', 'TRAT1', 'ZNF804A', 'TBX21', 'HIST1H2BE', 'GPR87', 'LOC100126784', 'CYSRT1', 'PART1', 'FOXC2', 'HOGA1', 'EMX1', 'CA9', 'ZSCAN1', 'HTR7', 'CEP83.AS1', 'SLC13A2', 'XKR9', 'WIPF3', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'OTUD7A', 'CITED1', 'ZBTB16', 'CYP26A1', 'TMEM40', 'TMSB15A', 'PVALB', 'ANKK1', 'WFDC3', 'MAPT.IT1', 'ROPN1L', 'MYO3B', 'GZMM', 'CDHR1', 'FIRRE', 'M1AP', 'MRAP2', 'INE2', 'RFX8', 'TTC23L', 'IGSF22', 'CRTAC1', 'RBM12B.AS1', 'SPAG17', 'MROH7', 'KCNT2', 'PYGM', 'PCDHA12', 'CFAP61', 'BTC', 'HEATR4', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'NWD1', 'CLEC4E', 'LRRC4B', 'SRSF12', 'B3GAT1', 'CCBE1', 'OPCML', 'ADGRF1', 'MIA', 'LINC00173', 'TMEM59L', 'CIDEC', 'HPDL', 'NLRP7', 'RNF182', 'FRMPD1', 'SMC1B', 'KCNA6', 'KLK6', 'ABCC6P2', 'FASLG', 'IL11', 'LOC613037', 'LSAMP', 'GALNT13', 'TSPAN8', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'C15ORF56', 'FAM83A', 'COL28A1', 'PSORS1C1', 'ANO5', 'SLC6A14', 'SLC16A11', 'PTCHD1', 'TMPRSS4', 'C9ORF47', 'ADGRG2', 'SLC24A5', 'TUSC5', 'CYP4F12', 'LOC100133669', 'RUFY4', 'LINC00908', 'KCNQ3', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'VENTX', 'NBPF4', 'MYOM2', 'FAM157A', 'EBF2', 'MAG', 'DSCAML1', 'PTPRN', 'PCDHA5', 'KLK7', 'CCNI2', 'CDKN2B.AS1', 'SYT6', 'DLX2', 'SFTPA2', 'ZBTB20', 'NKX3.2', 'DLX5', 'FAM19A2', 'PLAC1', 'BRE.AS1', 'CNTN2', 'OR2W3', 'SLC6A17', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'TFAP2E', 'CD160', 'ABCD2', 'CD1A', 'GRIA2', 'CCDC144A', 'DEFB1', 'RGS9', 'CACNA1I', 'GGT3P', 'DLK2', 'MYO16', 'PWAR5', 'CDKL2', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CABP4', 'CHRNA10', 'TCEAL2', 'UNC13A', 'FKBP1AP1', 'LY6H', 'AGBL4', 'SLC39A2', 'XCL2', 'TUBAL3', 'S100A7', 'SPAG8', 'PCBP3', 'MPL', 'KCNH3', 'LINC00202.1', 'ARL9', 'TM6SF2', 'ZNF727', 'GRID2IP', 'P2RY12', 'MAK', 'TCN1', 'HRCT1', 'SNORD116.4', 'ELOVL3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'GPM6A', 'CD70', 'SYCE3', 'SYCE2', 'PGLYRP2', 'TIGD4', 'GRIN2A', 'JAKMIP1', 'ARMC3', 'BAIAP2L2', 'RAB9B', 'CTAGE6', 'MKRN3', 'SOSTDC1', 'ASIC3', 'KLF3.AS1', 'LONRF3', 'AGAP7P', 'LRRC43', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'LOC400927', 'ACHE', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'HRC', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'GPR82', 'CHODL', 'CXADRP3', 'TTBK1', 'LOC285593', 'PAH', 'TTYH1', 'HIST1H2BH', 'ADGRL3', 'MLLT4.AS1', 'APOBEC3A', 'CHST9', 'GABRB3', 'SLC25A34', 'MAPK4', 'BRSK2', 'TRH', 'DNASE1L2', 'C8ORF46', 'ST8SIA2', 'CAMK4', 'DGCR5', 'EPYC', 'GBP6', 'GPR63', 'CAPSL', 'MUC15', 'ANKLE1', 'IL17D', 'SLC35F3', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'HAMP', 'MYO15A', 'RMRP', 'FAM201A', 'TNFSF11', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'RHCE', 'DCLK3', 'PTX3', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'RUNDC3A', 'ROPN1B', 'CYP2E1', 'LOC100132215', 'KCNK17', 'FOLR1', 'RRN3P1', 'UCKL1.AS1', 'LINC00961', 'C1QL3', 'PNMA6A', 'CYTL1', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'THSD7B', 'ATP13A4', 'MT1L', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'LIN7A', 'IL1RL1', 'CCR10', 'KISS1R', 'TMEM150B', 'ZMAT4', 'IL24', 'KIF19', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'DPEP1', 'TTLL9', 'WBP2NL', 'A2ML1', 'NIPAL4', 'PRRT4', 'RHBG', 'GPR135', 'KIAA1210', 'LOC90246', 'CNTNAP3', 'RRAD', 'CD300LB', 'PCDHB18P', 'CBLN1', 'B3GALT5', 'GNMT', 'FIGF', 'OXGR1', 'DPF3', 'IL18RAP', 'MAP7D2', 'SLC5A8', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'LRRC24', 'AIM2', 'RAB39A', 'TRIM7', 'PCDH20', 'GABRB2', 'FOXN1', 'TIFAB', 'PHKG1', 'PON3', 'DNAH11', 'MASP2', 'KLK8', 'WFIKKN1', 'CD19', 'CRB2', 'GPR171', 'FREM2', 'DCST2', 'WNT10A', 'LINC00669', 'C19ORF45', 'CLCA2', 'ANK1', 'SLC26A3', 'KCNB1', 'SEPHS1P1', 'HIST1H2AG', 'LINC01465', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'NEURL3', 'RIC3', 'COLCA1', 'CD1E', 'HNRNPCL3', 'TTC41P', 'ANO2', 'MED12L', 'LOC646999', 'CST2', 'PCDHGC5', 'EYA1', 'NRXN1', 'RAB3B', 'MYEOV', 'FAM182B', 'IL6', 'SEC14L1P1', 'CLPSL1', 'STXBP6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'LPAR4', 'CXCR2', 'KIF4B', 'MSLN', 'CR2', 'FNDC8', 'AJAP1', 'CLDN14', 'PATL2', 'TDRD9', 'ZNF676', 'CLEC4F', 'KCNRG', 'C9ORF117', 'FAM43B', 'HAPLN1', 'ABHD1', 'MAGEL2', 'NDP', 'VIT', 'TRABD2A', 'PDCD1', 'TSPAN32', 'MKX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 5.757042618113747e-15 NRMSE: 9.23565030578928e-16 MAPE: 4.512634240938364e-12 Pearson Correlation: 0.511658582475799 Spearman Correlation: 0.47094917569017664 Coefficient of Determination: -0.09075217272254066 RMSE: 1.201696878565786 NRMSE: 0.21340736611006678 MAPE: 518.760174386363 Predictor: ElasticNet Pearson Correlation: 0.9313177774566549 Spearman Correlation: 0.8755609297492929 Coefficient of Determination: 0.825237961801657 RMSE: 0.4684606696478375 NRMSE: 0.07515210871065012 MAPE: 212.45784898765052 Pearson Correlation: 0.5610585494937816 Spearman Correlation: 0.519710272168569 Coefficient of Determination: 0.2638388225266567 RMSE: 0.9872300016743008 NRMSE: 0.17532054726945492 MAPE: 289.7963412231742 Predictor: RandomForests Pearson Correlation: 0.6508665217155734 Spearman Correlation: 0.5839877674651327 Coefficient of Determination: 0.416872418838762 RMSE: 0.8557193961899562 NRMSE: 0.13727751603271937 MAPE: 243.53015577149168 Pearson Correlation: 0.6040871819969447 Spearman Correlation: 0.6692558607568835 Coefficient of Determination: 0.32784639081311306 RMSE: 0.943335454140178 NRMSE: 0.16752538698990907 MAPE: 174.3588523783231 Protein: CDH2 x_train_column_count: 1002 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'IQUB', 'LINC01119', 'CBLN4', 'NKPD1', 'LINC01341', 'SOX8', 'EYS', 'ECT2L', 'PAX2', 'FXYD1', 'PPP1R3G', 'RNF138P1', 'CCR8', 'CCIN', 'MYCBPAP', 'XPNPEP2', 'ETV2', 'TEKT3', 'STKLD1', 'SLC30A8', 'C19ORF18', 'UGT8', 'SLC28A3', 'JPH4', 'UBE2Q2P1', 'METTL7B', 'SLC25A18', 'HEPACAM2', 'CASQ1', 'PLP1', 'TEX14', 'IDI2.AS1', 'S100A3', 'GLIS1', 'SGK2', 'ZNF843', 'LRIT3', 'CCDC36', 'NR1I3', 'LINC00482', 'ALOXE3', 'CACNG1', 'WNT2B', 'MS4A15', 'PBX4', 'ZIC2', 'ST6GALNAC1', 'GTSE1.AS1', 'ADAMTS8', 'PYGO1', 'LGALS2', 'TMEM92', 'FUT9', 'FCRL6', 'CCDC151', 'C9ORF43', 'PITX2', 'BCHE', 'PNCK', 'TNNI3K', 'AOC2', 'GJB1', 'DQX1', 'CKMT2', 'LPAR3', 'FAM189A1', 'ABCA17P', 'CACNA1G', 'C2ORF50', 'C1ORF101', 'NLRP12', 'ADCYAP1', 'ENPP6', 'SLC6A20', 'IYD', 'ZNF835', 'OTOA', 'CA3', 'SPIB', 'CLDN9', 'FAM95B1', 'FAM90A1', 'RYR2', 'C2CD4A', 'C1ORF95', 'PCDH9', 'LINC01550', 'CLEC3A', 'SVOPL', 'CCDC158', 'SCN2B', 'VSIG1', 'CLECL1', 'PCSK1N', 'IL20RB', 'ARC', 'CCDC65', 'TAS1R3', 'GSDMC', 'TTC16', 'AURKC', 'ZCCHC18', 'ULBP3', 'DDX11L2', 'DUOXA1', 'B3GALT5.AS1', 'ALDH8A1', 'KNDC1', 'COLCA2', 'GSTM1', 'PCYT1B', 'BPIFB2', 'MYOZ1', 'PDE1C', 'CRYGS', 'PPP1R36', 'TARP', 'KLHL4', 'LOC148709', 'LUZP2', 'LOC441455', 'JPH3', 'CPEB1', 'IL22RA1', 'HOXD3', 'FAM57B', 'LOC90768', 'CAMP', 'OR7E91P', 'FLJ37201', 'RIMS1', 'IL12RB2', 'RELN', 'LBX2', 'FUT7', 'SCARA5', 'PLA2G5', 'KCNE1', 'IGSF5', 'TUBB8', 'HIST1H2BN', 'GPR18', 'ZBED3.AS1', 'SLC22A18AS', 'HOXB13', 'CD177', 'ZC3H12D', 'MNX1', 'ASTN1', 'CIDEA', 'TCHH', 'ONECUT2', 'C10ORF128', 'GAL', 'SP5', 'WDR72', 'CHRNA6', 'KCNE2', 'IRX4', 'FAM135B', 'BTBD8', 'SLC16A10', 'RSPH4A', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'MGC16142', 'CCDC7', 'DCSTAMP', 'CELF5', 'GRIN2C', 'MGAT5B', 'GBP1P1', 'CXXC4', 'YPEL4', 'GPR3', 'CXCR5', 'HOXA11', 'SLC30A2', 'OBP2B', 'SLC35F1', 'ATP13A5', 'NIPAL1', 'PYDC1', 'SKIDA1', 'CCDC153', 'RPGRIP1', 'SRL', 'STRC', 'WT1', 'TNFRSF9', 'LRP1B', 'PCSK9', 'PCAT18', 'FOXJ1', 'SLC18A2', 'PPP4R4', 'NOXO1', 'PCK1', 'INSM1', 'CNNM1', 'GPR174', 'MARCO', 'SLC25A53', 'C17ORF104', 'FOXD4', 'DMRT3', 'GPX2', 'INHA', 'COL23A1', 'NOS2', 'ADH1C', 'FOXD1', 'PKNOX2', 'KLHL14', 'BTLA', 'CRISP3', 'LBP', 'IL20', 'TNFRSF17', 'AVPR2', 'GLOD5', 'MYBPC1', 'PARP15', 'CXCL2', 'GPLD1', 'PFN1P2', 'CST9', 'GPR55', 'SLCO4C1', 'SLC23A1', 'STEAP1B', 'C2ORF40', 'BCL2L14', 'DHRS4L1', 'SCN3A', 'AMH', 'ULBP2', 'CXCR2P1', 'VAT1L', 'ZNF98', 'VSIG2', 'RNF212', 'VGLL1', 'HAP1', 'CYSLTR2', 'ZNF454', 'TPSG1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'ORM1', 'ZNF488', 'TMEM105', 'FAM178B', 'P2RX1', 'DKK1', 'DPY19L2P2', 'IL23A', 'SIGLEC17P', 'CRYM', 'PRKG2', 'CXCL1', 'AMBP', 'BRINP1', 'CTCFL', 'SUCNR1', 'DEPDC4', 'FABP7', 'SPDYE1', 'LRRC2', 'GPBAR1', 'XIRP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'FUT6', 'RERGL', 'BDKRB1', 'TENM1', 'LINC00930', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'NUGGC', 'KIAA0319', 'CECR2', 'SORCS1', 'ABHD11.AS1', 'PCDHGA3', 'PKD1L1', 'FAM184B', 'ECEL1', 'CBLN2', 'WSCD2', 'SPESP1', 'SEC14L5', 'SSUH2', 'FSCN2', 'DMRT2', 'FAM162B', 'CCL17', 'ZNF732', 'HOXD4', 'PIANP', 'TMEM217', 'GRIA3', 'CTSG', 'GNB3', 'RSPO1', 'RGS6', 'COL2A1', 'SERPINA6', 'MT1A', 'ADAMTS19', 'IL1R2', 'RNF175', 'CHRNB2', 'ADAM32', 'FLJ12825', 'RASL10A', 'PFKFB1', 'POM121L9P', 'HECTD2.AS1', 'DIRC3', 'PRSS21', 'SMIM5', 'CYP46A1', 'LRRC16B', 'CAPN11', 'IGF2BP3', 'VIPR2', 'TRAT1', 'ZNF804A', 'TBX21', 'HIST1H2BE', 'GPR87', 'LOC100126784', 'CYSRT1', 'PART1', 'FOXC2', 'HOGA1', 'EMX1', 'CA9', 'ZSCAN1', 'HTR7', 'CEP83.AS1', 'SLC13A2', 'XKR9', 'WIPF3', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'OTUD7A', 'CITED1', 'ZBTB16', 'CYP26A1', 'TMEM40', 'TMSB15A', 'PVALB', 'ANKK1', 'WFDC3', 'MAPT.IT1', 'ROPN1L', 'MYO3B', 'GZMM', 'CDHR1', 'FIRRE', 'M1AP', 'MRAP2', 'INE2', 'RFX8', 'TTC23L', 'IGSF22', 'CRTAC1', 'RBM12B.AS1', 'SPAG17', 'MROH7', 'KCNT2', 'PYGM', 'PCDHA12', 'CFAP61', 'BTC', 'HEATR4', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'NWD1', 'CLEC4E', 'LRRC4B', 'SRSF12', 'B3GAT1', 'CCBE1', 'OPCML', 'ADGRF1', 'MIA', 'LINC00173', 'TMEM59L', 'CIDEC', 'HPDL', 'NLRP7', 'RNF182', 'FRMPD1', 'SMC1B', 'KCNA6', 'KLK6', 'ABCC6P2', 'FASLG', 'IL11', 'LOC613037', 'LSAMP', 'GALNT13', 'TSPAN8', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'C15ORF56', 'FAM83A', 'COL28A1', 'PSORS1C1', 'ANO5', 'SLC6A14', 'SLC16A11', 'PTCHD1', 'TMPRSS4', 'C9ORF47', 'ADGRG2', 'SLC24A5', 'TUSC5', 'CYP4F12', 'LOC100133669', 'RUFY4', 'LINC00908', 'KCNQ3', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'VENTX', 'NBPF4', 'MYOM2', 'FAM157A', 'EBF2', 'MAG', 'DSCAML1', 'PTPRN', 'PCDHA5', 'KLK7', 'CCNI2', 'CDKN2B.AS1', 'SYT6', 'DLX2', 'SFTPA2', 'ZBTB20', 'NKX3.2', 'DLX5', 'FAM19A2', 'PLAC1', 'BRE.AS1', 'CNTN2', 'OR2W3', 'SLC6A17', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'TFAP2E', 'CD160', 'ABCD2', 'CD1A', 'GRIA2', 'CCDC144A', 'DEFB1', 'RGS9', 'CACNA1I', 'GGT3P', 'DLK2', 'MYO16', 'PWAR5', 'CDKL2', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CABP4', 'CHRNA10', 'TCEAL2', 'UNC13A', 'FKBP1AP1', 'LY6H', 'AGBL4', 'SLC39A2', 'XCL2', 'TUBAL3', 'S100A7', 'SPAG8', 'PCBP3', 'MPL', 'KCNH3', 'LINC00202.1', 'ARL9', 'TM6SF2', 'ZNF727', 'GRID2IP', 'P2RY12', 'MAK', 'TCN1', 'HRCT1', 'SNORD116.4', 'ELOVL3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'GPM6A', 'CD70', 'SYCE3', 'SYCE2', 'PGLYRP2', 'TIGD4', 'GRIN2A', 'JAKMIP1', 'ARMC3', 'BAIAP2L2', 'RAB9B', 'CTAGE6', 'MKRN3', 'SOSTDC1', 'ASIC3', 'KLF3.AS1', 'LONRF3', 'AGAP7P', 'LRRC43', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'LOC400927', 'ACHE', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'HRC', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'GPR82', 'CHODL', 'CXADRP3', 'TTBK1', 'LOC285593', 'PAH', 'TTYH1', 'HIST1H2BH', 'ADGRL3', 'MLLT4.AS1', 'APOBEC3A', 'CHST9', 'GABRB3', 'SLC25A34', 'MAPK4', 'BRSK2', 'TRH', 'DNASE1L2', 'C8ORF46', 'ST8SIA2', 'CAMK4', 'DGCR5', 'EPYC', 'GBP6', 'GPR63', 'CAPSL', 'MUC15', 'ANKLE1', 'IL17D', 'SLC35F3', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'HAMP', 'MYO15A', 'RMRP', 'FAM201A', 'TNFSF11', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'RHCE', 'DCLK3', 'PTX3', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'RUNDC3A', 'ROPN1B', 'CYP2E1', 'LOC100132215', 'KCNK17', 'FOLR1', 'RRN3P1', 'UCKL1.AS1', 'LINC00961', 'C1QL3', 'PNMA6A', 'CYTL1', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'THSD7B', 'ATP13A4', 'MT1L', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'LIN7A', 'IL1RL1', 'CCR10', 'KISS1R', 'TMEM150B', 'ZMAT4', 'IL24', 'KIF19', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'DPEP1', 'TTLL9', 'WBP2NL', 'A2ML1', 'NIPAL4', 'PRRT4', 'RHBG', 'GPR135', 'KIAA1210', 'LOC90246', 'CNTNAP3', 'RRAD', 'CD300LB', 'PCDHB18P', 'CBLN1', 'B3GALT5', 'GNMT', 'FIGF', 'OXGR1', 'DPF3', 'IL18RAP', 'MAP7D2', 'SLC5A8', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'LRRC24', 'AIM2', 'RAB39A', 'TRIM7', 'PCDH20', 'GABRB2', 'FOXN1', 'TIFAB', 'PHKG1', 'PON3', 'DNAH11', 'MASP2', 'KLK8', 'WFIKKN1', 'CD19', 'CRB2', 'GPR171', 'FREM2', 'DCST2', 'WNT10A', 'LINC00669', 'C19ORF45', 'CLCA2', 'ANK1', 'SLC26A3', 'KCNB1', 'SEPHS1P1', 'HIST1H2AG', 'LINC01465', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'NEURL3', 'RIC3', 'COLCA1', 'CD1E', 'HNRNPCL3', 'TTC41P', 'ANO2', 'MED12L', 'LOC646999', 'CST2', 'PCDHGC5', 'EYA1', 'NRXN1', 'RAB3B', 'MYEOV', 'FAM182B', 'IL6', 'SEC14L1P1', 'CLPSL1', 'STXBP6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'LPAR4', 'CXCR2', 'KIF4B', 'MSLN', 'CR2', 'FNDC8', 'AJAP1', 'CLDN14', 'PATL2', 'TDRD9', 'ZNF676', 'CLEC4F', 'KCNRG', 'C9ORF117', 'FAM43B', 'HAPLN1', 'ABHD1', 'MAGEL2', 'NDP', 'VIT', 'TRABD2A', 'PDCD1', 'TSPAN32', 'MKX', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 1.8468175319855487e-15 NRMSE: 6.691852786381437e-16 MAPE: 1.479443047598958e-11 Pearson Correlation: 0.027165137114193064 Spearman Correlation: 0.07490976490098529 Coefficient of Determination: -0.9399273487665933 RMSE: 0.5391304837825369 NRMSE: 0.28402644851753894 MAPE: 392.9226225431345 Predictor: ElasticNet Pearson Correlation: 0.7679269848813791 Spearman Correlation: 0.7457960586130351 Coefficient of Determination: 0.45669774582655986 RMSE: 0.27132171209779454 NRMSE: 0.09831209221602817 MAPE: 1746.9159599792779 Pearson Correlation: 0.1890562833703159 Spearman Correlation: 0.23593795727246122 Coefficient of Determination: 0.010757569442290005 RMSE: 0.38499272564729364 NRMSE: 0.20282310101165527 MAPE: 220.3477414048614 Predictor: RandomForests Pearson Correlation: 0.47455731616776564 Spearman Correlation: 0.4750422673388115 Coefficient of Determination: 0.12565410943968336 RMSE: 0.3441956933332988 NRMSE: 0.12471762204989449 MAPE: 666.4015326003622 Pearson Correlation: 0.3297348446175957 Spearman Correlation: 0.37487562189054735 Coefficient of Determination: 0.07708379934577059 RMSE: 0.371862419388905 NRMSE: 0.19590575100697252 MAPE: 145.59945765167092 Protein: CDH3 x_train_column_count: 1002 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'IQUB', 'LINC01119', 'CBLN4', 'NKPD1', 'LINC01341', 'SOX8', 'EYS', 'ECT2L', 'PAX2', 'FXYD1', 'PPP1R3G', 'RNF138P1', 'CCR8', 'CCIN', 'MYCBPAP', 'XPNPEP2', 'ETV2', 'TEKT3', 'STKLD1', 'SLC30A8', 'C19ORF18', 'UGT8', 'SLC28A3', 'JPH4', 'UBE2Q2P1', 'METTL7B', 'SLC25A18', 'HEPACAM2', 'CASQ1', 'PLP1', 'TEX14', 'IDI2.AS1', 'S100A3', 'GLIS1', 'SGK2', 'ZNF843', 'LRIT3', 'CCDC36', 'NR1I3', 'LINC00482', 'ALOXE3', 'CACNG1', 'WNT2B', 'MS4A15', 'PBX4', 'ZIC2', 'ST6GALNAC1', 'GTSE1.AS1', 'ADAMTS8', 'PYGO1', 'LGALS2', 'TMEM92', 'FUT9', 'FCRL6', 'CCDC151', 'C9ORF43', 'PITX2', 'BCHE', 'PNCK', 'TNNI3K', 'AOC2', 'GJB1', 'DQX1', 'CKMT2', 'LPAR3', 'FAM189A1', 'ABCA17P', 'CACNA1G', 'C2ORF50', 'C1ORF101', 'NLRP12', 'ADCYAP1', 'ENPP6', 'SLC6A20', 'IYD', 'ZNF835', 'OTOA', 'CA3', 'SPIB', 'CLDN9', 'FAM95B1', 'FAM90A1', 'RYR2', 'C2CD4A', 'C1ORF95', 'PCDH9', 'LINC01550', 'CLEC3A', 'SVOPL', 'CCDC158', 'SCN2B', 'VSIG1', 'CLECL1', 'PCSK1N', 'IL20RB', 'ARC', 'CCDC65', 'TAS1R3', 'GSDMC', 'TTC16', 'AURKC', 'ZCCHC18', 'ULBP3', 'DDX11L2', 'DUOXA1', 'B3GALT5.AS1', 'ALDH8A1', 'KNDC1', 'COLCA2', 'GSTM1', 'PCYT1B', 'BPIFB2', 'MYOZ1', 'PDE1C', 'CRYGS', 'PPP1R36', 'TARP', 'KLHL4', 'LOC148709', 'LUZP2', 'LOC441455', 'JPH3', 'CPEB1', 'IL22RA1', 'HOXD3', 'FAM57B', 'LOC90768', 'CAMP', 'OR7E91P', 'FLJ37201', 'RIMS1', 'IL12RB2', 'RELN', 'LBX2', 'FUT7', 'SCARA5', 'PLA2G5', 'KCNE1', 'IGSF5', 'TUBB8', 'HIST1H2BN', 'GPR18', 'ZBED3.AS1', 'SLC22A18AS', 'HOXB13', 'CD177', 'ZC3H12D', 'MNX1', 'ASTN1', 'CIDEA', 'TCHH', 'ONECUT2', 'C10ORF128', 'GAL', 'SP5', 'WDR72', 'CHRNA6', 'KCNE2', 'IRX4', 'FAM135B', 'BTBD8', 'SLC16A10', 'RSPH4A', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'MGC16142', 'CCDC7', 'DCSTAMP', 'CELF5', 'GRIN2C', 'MGAT5B', 'GBP1P1', 'CXXC4', 'YPEL4', 'GPR3', 'CXCR5', 'HOXA11', 'SLC30A2', 'OBP2B', 'SLC35F1', 'ATP13A5', 'NIPAL1', 'PYDC1', 'SKIDA1', 'CCDC153', 'RPGRIP1', 'SRL', 'STRC', 'WT1', 'TNFRSF9', 'LRP1B', 'PCSK9', 'PCAT18', 'FOXJ1', 'SLC18A2', 'PPP4R4', 'NOXO1', 'PCK1', 'INSM1', 'CNNM1', 'GPR174', 'MARCO', 'SLC25A53', 'C17ORF104', 'FOXD4', 'DMRT3', 'GPX2', 'INHA', 'COL23A1', 'NOS2', 'ADH1C', 'FOXD1', 'PKNOX2', 'KLHL14', 'BTLA', 'CRISP3', 'LBP', 'IL20', 'TNFRSF17', 'AVPR2', 'GLOD5', 'MYBPC1', 'PARP15', 'CXCL2', 'GPLD1', 'PFN1P2', 'CST9', 'GPR55', 'SLCO4C1', 'SLC23A1', 'STEAP1B', 'C2ORF40', 'BCL2L14', 'DHRS4L1', 'SCN3A', 'AMH', 'ULBP2', 'CXCR2P1', 'VAT1L', 'ZNF98', 'VSIG2', 'RNF212', 'VGLL1', 'HAP1', 'CYSLTR2', 'ZNF454', 'TPSG1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'ORM1', 'ZNF488', 'TMEM105', 'FAM178B', 'P2RX1', 'DKK1', 'DPY19L2P2', 'IL23A', 'SIGLEC17P', 'CRYM', 'PRKG2', 'CXCL1', 'AMBP', 'BRINP1', 'CTCFL', 'SUCNR1', 'DEPDC4', 'FABP7', 'SPDYE1', 'LRRC2', 'GPBAR1', 'XIRP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'FUT6', 'RERGL', 'BDKRB1', 'TENM1', 'LINC00930', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'NUGGC', 'KIAA0319', 'CECR2', 'SORCS1', 'ABHD11.AS1', 'PCDHGA3', 'PKD1L1', 'FAM184B', 'ECEL1', 'CBLN2', 'WSCD2', 'SPESP1', 'SEC14L5', 'SSUH2', 'FSCN2', 'DMRT2', 'FAM162B', 'CCL17', 'ZNF732', 'HOXD4', 'PIANP', 'TMEM217', 'GRIA3', 'CTSG', 'GNB3', 'RSPO1', 'RGS6', 'COL2A1', 'SERPINA6', 'MT1A', 'ADAMTS19', 'IL1R2', 'RNF175', 'CHRNB2', 'ADAM32', 'FLJ12825', 'RASL10A', 'PFKFB1', 'POM121L9P', 'HECTD2.AS1', 'DIRC3', 'PRSS21', 'SMIM5', 'CYP46A1', 'LRRC16B', 'CAPN11', 'IGF2BP3', 'VIPR2', 'TRAT1', 'ZNF804A', 'TBX21', 'HIST1H2BE', 'GPR87', 'LOC100126784', 'CYSRT1', 'PART1', 'FOXC2', 'HOGA1', 'EMX1', 'CA9', 'ZSCAN1', 'HTR7', 'CEP83.AS1', 'SLC13A2', 'XKR9', 'WIPF3', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'OTUD7A', 'CITED1', 'ZBTB16', 'CYP26A1', 'TMEM40', 'TMSB15A', 'PVALB', 'ANKK1', 'WFDC3', 'MAPT.IT1', 'ROPN1L', 'MYO3B', 'GZMM', 'CDHR1', 'FIRRE', 'M1AP', 'MRAP2', 'INE2', 'RFX8', 'TTC23L', 'IGSF22', 'CRTAC1', 'RBM12B.AS1', 'SPAG17', 'MROH7', 'KCNT2', 'PYGM', 'PCDHA12', 'CFAP61', 'BTC', 'HEATR4', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'NWD1', 'CLEC4E', 'LRRC4B', 'SRSF12', 'B3GAT1', 'CCBE1', 'OPCML', 'ADGRF1', 'MIA', 'LINC00173', 'TMEM59L', 'CIDEC', 'HPDL', 'NLRP7', 'RNF182', 'FRMPD1', 'SMC1B', 'KCNA6', 'KLK6', 'ABCC6P2', 'FASLG', 'IL11', 'LOC613037', 'LSAMP', 'GALNT13', 'TSPAN8', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'C15ORF56', 'FAM83A', 'COL28A1', 'PSORS1C1', 'ANO5', 'SLC6A14', 'SLC16A11', 'PTCHD1', 'TMPRSS4', 'C9ORF47', 'ADGRG2', 'SLC24A5', 'TUSC5', 'CYP4F12', 'LOC100133669', 'RUFY4', 'LINC00908', 'KCNQ3', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'VENTX', 'NBPF4', 'MYOM2', 'FAM157A', 'EBF2', 'MAG', 'DSCAML1', 'PTPRN', 'PCDHA5', 'KLK7', 'CCNI2', 'CDKN2B.AS1', 'SYT6', 'DLX2', 'SFTPA2', 'ZBTB20', 'NKX3.2', 'DLX5', 'FAM19A2', 'PLAC1', 'BRE.AS1', 'CNTN2', 'OR2W3', 'SLC6A17', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'TFAP2E', 'CD160', 'ABCD2', 'CD1A', 'GRIA2', 'CCDC144A', 'DEFB1', 'RGS9', 'CACNA1I', 'GGT3P', 'DLK2', 'MYO16', 'PWAR5', 'CDKL2', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CABP4', 'CHRNA10', 'TCEAL2', 'UNC13A', 'FKBP1AP1', 'LY6H', 'AGBL4', 'SLC39A2', 'XCL2', 'TUBAL3', 'S100A7', 'SPAG8', 'PCBP3', 'MPL', 'KCNH3', 'LINC00202.1', 'ARL9', 'TM6SF2', 'ZNF727', 'GRID2IP', 'P2RY12', 'MAK', 'TCN1', 'HRCT1', 'SNORD116.4', 'ELOVL3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'GPM6A', 'CD70', 'SYCE3', 'SYCE2', 'PGLYRP2', 'TIGD4', 'GRIN2A', 'JAKMIP1', 'ARMC3', 'BAIAP2L2', 'RAB9B', 'CTAGE6', 'MKRN3', 'SOSTDC1', 'ASIC3', 'KLF3.AS1', 'LONRF3', 'AGAP7P', 'LRRC43', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'LOC400927', 'ACHE', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'HRC', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'GPR82', 'CHODL', 'CXADRP3', 'TTBK1', 'LOC285593', 'PAH', 'TTYH1', 'HIST1H2BH', 'ADGRL3', 'MLLT4.AS1', 'APOBEC3A', 'CHST9', 'GABRB3', 'SLC25A34', 'MAPK4', 'BRSK2', 'TRH', 'DNASE1L2', 'C8ORF46', 'ST8SIA2', 'CAMK4', 'DGCR5', 'EPYC', 'GBP6', 'GPR63', 'CAPSL', 'MUC15', 'ANKLE1', 'IL17D', 'SLC35F3', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'HAMP', 'MYO15A', 'RMRP', 'FAM201A', 'TNFSF11', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'RHCE', 'DCLK3', 'PTX3', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'RUNDC3A', 'ROPN1B', 'CYP2E1', 'LOC100132215', 'KCNK17', 'FOLR1', 'RRN3P1', 'UCKL1.AS1', 'LINC00961', 'C1QL3', 'PNMA6A', 'CYTL1', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'THSD7B', 'ATP13A4', 'MT1L', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'LIN7A', 'IL1RL1', 'CCR10', 'KISS1R', 'TMEM150B', 'ZMAT4', 'IL24', 'KIF19', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'DPEP1', 'TTLL9', 'WBP2NL', 'A2ML1', 'NIPAL4', 'PRRT4', 'RHBG', 'GPR135', 'KIAA1210', 'LOC90246', 'CNTNAP3', 'RRAD', 'CD300LB', 'PCDHB18P', 'CBLN1', 'B3GALT5', 'GNMT', 'FIGF', 'OXGR1', 'DPF3', 'IL18RAP', 'MAP7D2', 'SLC5A8', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'LRRC24', 'AIM2', 'RAB39A', 'TRIM7', 'PCDH20', 'GABRB2', 'FOXN1', 'TIFAB', 'PHKG1', 'PON3', 'DNAH11', 'MASP2', 'KLK8', 'WFIKKN1', 'CD19', 'CRB2', 'GPR171', 'FREM2', 'DCST2', 'WNT10A', 'LINC00669', 'C19ORF45', 'CLCA2', 'ANK1', 'SLC26A3', 'KCNB1', 'SEPHS1P1', 'HIST1H2AG', 'LINC01465', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'NEURL3', 'RIC3', 'COLCA1', 'CD1E', 'HNRNPCL3', 'TTC41P', 'ANO2', 'MED12L', 'LOC646999', 'CST2', 'PCDHGC5', 'EYA1', 'NRXN1', 'RAB3B', 'MYEOV', 'FAM182B', 'IL6', 'SEC14L1P1', 'CLPSL1', 'STXBP6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'LPAR4', 'CXCR2', 'KIF4B', 'MSLN', 'CR2', 'FNDC8', 'AJAP1', 'CLDN14', 'PATL2', 'TDRD9', 'ZNF676', 'CLEC4F', 'KCNRG', 'C9ORF117', 'FAM43B', 'HAPLN1', 'ABHD1', 'MAGEL2', 'NDP', 'VIT', 'TRABD2A', 'PDCD1', 'TSPAN32', 'MKX', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 1.2598662449091082e-15 NRMSE: 9.481732518337872e-16 MAPE: 5.790251618784219e-12 Pearson Correlation: 0.23226546360002714 Spearman Correlation: 0.1949078138718174 Coefficient of Determination: -1.204151193884218 RMSE: 0.29385076176000774 NRMSE: 0.24179277689460033 MAPE: 1468.3009802102044 Predictor: ElasticNet Pearson Correlation: 0.633999555936685 Spearman Correlation: 0.6355549347541853 Coefficient of Determination: 0.3632428269219393 RMSE: 0.16574385760431498 NRMSE: 0.12473855305766782 MAPE: 270.0210376926483 Pearson Correlation: 0.3488594616461997 Spearman Correlation: 0.3960247780704322 Coefficient of Determination: -0.023548089706898256 RMSE: 0.2002443430932941 NRMSE: 0.16476947510350873 MAPE: 1534.770799397168 Predictor: RandomForests Pearson Correlation: 0.5686170341549566 Spearman Correlation: 0.57253083089248 Coefficient of Determination: 0.26470625847387175 RMSE: 0.17810698598058403 NRMSE: 0.1340430230224229 MAPE: 194.89944550307789 Pearson Correlation: 0.343331147487661 Spearman Correlation: 0.38573309920983323 Coefficient of Determination: -0.007889179189691564 RMSE: 0.19870670477792182 NRMSE: 0.16350424156827273 MAPE: 675.6413395830748 Protein: PTEN x_train_column_count: 1002 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'IQUB', 'LINC01119', 'CBLN4', 'NKPD1', 'LINC01341', 'SOX8', 'EYS', 'ECT2L', 'PAX2', 'FXYD1', 'PPP1R3G', 'RNF138P1', 'CCR8', 'CCIN', 'MYCBPAP', 'XPNPEP2', 'ETV2', 'TEKT3', 'STKLD1', 'SLC30A8', 'C19ORF18', 'UGT8', 'SLC28A3', 'JPH4', 'UBE2Q2P1', 'METTL7B', 'SLC25A18', 'HEPACAM2', 'CASQ1', 'PLP1', 'TEX14', 'IDI2.AS1', 'S100A3', 'GLIS1', 'SGK2', 'ZNF843', 'LRIT3', 'CCDC36', 'NR1I3', 'LINC00482', 'ALOXE3', 'CACNG1', 'WNT2B', 'MS4A15', 'PBX4', 'ZIC2', 'ST6GALNAC1', 'GTSE1.AS1', 'ADAMTS8', 'PYGO1', 'LGALS2', 'TMEM92', 'FUT9', 'FCRL6', 'CCDC151', 'C9ORF43', 'PITX2', 'BCHE', 'PNCK', 'TNNI3K', 'AOC2', 'GJB1', 'DQX1', 'CKMT2', 'LPAR3', 'FAM189A1', 'ABCA17P', 'CACNA1G', 'C2ORF50', 'C1ORF101', 'NLRP12', 'ADCYAP1', 'ENPP6', 'SLC6A20', 'IYD', 'ZNF835', 'OTOA', 'CA3', 'SPIB', 'CLDN9', 'FAM95B1', 'FAM90A1', 'RYR2', 'C2CD4A', 'C1ORF95', 'PCDH9', 'LINC01550', 'CLEC3A', 'SVOPL', 'CCDC158', 'SCN2B', 'VSIG1', 'CLECL1', 'PCSK1N', 'IL20RB', 'ARC', 'CCDC65', 'TAS1R3', 'GSDMC', 'TTC16', 'AURKC', 'ZCCHC18', 'ULBP3', 'DDX11L2', 'DUOXA1', 'B3GALT5.AS1', 'ALDH8A1', 'KNDC1', 'COLCA2', 'GSTM1', 'PCYT1B', 'BPIFB2', 'MYOZ1', 'PDE1C', 'CRYGS', 'PPP1R36', 'TARP', 'KLHL4', 'LOC148709', 'LUZP2', 'LOC441455', 'JPH3', 'CPEB1', 'IL22RA1', 'HOXD3', 'FAM57B', 'LOC90768', 'CAMP', 'OR7E91P', 'FLJ37201', 'RIMS1', 'IL12RB2', 'RELN', 'LBX2', 'FUT7', 'SCARA5', 'PLA2G5', 'KCNE1', 'IGSF5', 'TUBB8', 'HIST1H2BN', 'GPR18', 'ZBED3.AS1', 'SLC22A18AS', 'HOXB13', 'CD177', 'ZC3H12D', 'MNX1', 'ASTN1', 'CIDEA', 'TCHH', 'ONECUT2', 'C10ORF128', 'GAL', 'SP5', 'WDR72', 'CHRNA6', 'KCNE2', 'IRX4', 'FAM135B', 'BTBD8', 'SLC16A10', 'RSPH4A', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'MGC16142', 'CCDC7', 'DCSTAMP', 'CELF5', 'GRIN2C', 'MGAT5B', 'GBP1P1', 'CXXC4', 'YPEL4', 'GPR3', 'CXCR5', 'HOXA11', 'SLC30A2', 'OBP2B', 'SLC35F1', 'ATP13A5', 'NIPAL1', 'PYDC1', 'SKIDA1', 'CCDC153', 'RPGRIP1', 'SRL', 'STRC', 'WT1', 'TNFRSF9', 'LRP1B', 'PCSK9', 'PCAT18', 'FOXJ1', 'SLC18A2', 'PPP4R4', 'NOXO1', 'PCK1', 'INSM1', 'CNNM1', 'GPR174', 'MARCO', 'SLC25A53', 'C17ORF104', 'FOXD4', 'DMRT3', 'GPX2', 'INHA', 'COL23A1', 'NOS2', 'ADH1C', 'FOXD1', 'PKNOX2', 'KLHL14', 'BTLA', 'CRISP3', 'LBP', 'IL20', 'TNFRSF17', 'AVPR2', 'GLOD5', 'MYBPC1', 'PARP15', 'CXCL2', 'GPLD1', 'PFN1P2', 'CST9', 'GPR55', 'SLCO4C1', 'SLC23A1', 'STEAP1B', 'C2ORF40', 'BCL2L14', 'DHRS4L1', 'SCN3A', 'AMH', 'ULBP2', 'CXCR2P1', 'VAT1L', 'ZNF98', 'VSIG2', 'RNF212', 'VGLL1', 'HAP1', 'CYSLTR2', 'ZNF454', 'TPSG1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'ORM1', 'ZNF488', 'TMEM105', 'FAM178B', 'P2RX1', 'DKK1', 'DPY19L2P2', 'IL23A', 'SIGLEC17P', 'CRYM', 'PRKG2', 'CXCL1', 'AMBP', 'BRINP1', 'CTCFL', 'SUCNR1', 'DEPDC4', 'FABP7', 'SPDYE1', 'LRRC2', 'GPBAR1', 'XIRP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'FUT6', 'RERGL', 'BDKRB1', 'TENM1', 'LINC00930', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'NUGGC', 'KIAA0319', 'CECR2', 'SORCS1', 'ABHD11.AS1', 'PCDHGA3', 'PKD1L1', 'FAM184B', 'ECEL1', 'CBLN2', 'WSCD2', 'SPESP1', 'SEC14L5', 'SSUH2', 'FSCN2', 'DMRT2', 'FAM162B', 'CCL17', 'ZNF732', 'HOXD4', 'PIANP', 'TMEM217', 'GRIA3', 'CTSG', 'GNB3', 'RSPO1', 'RGS6', 'COL2A1', 'SERPINA6', 'MT1A', 'ADAMTS19', 'IL1R2', 'RNF175', 'CHRNB2', 'ADAM32', 'FLJ12825', 'RASL10A', 'PFKFB1', 'POM121L9P', 'HECTD2.AS1', 'DIRC3', 'PRSS21', 'SMIM5', 'CYP46A1', 'LRRC16B', 'CAPN11', 'IGF2BP3', 'VIPR2', 'TRAT1', 'ZNF804A', 'TBX21', 'HIST1H2BE', 'GPR87', 'LOC100126784', 'CYSRT1', 'PART1', 'FOXC2', 'HOGA1', 'EMX1', 'CA9', 'ZSCAN1', 'HTR7', 'CEP83.AS1', 'SLC13A2', 'XKR9', 'WIPF3', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'OTUD7A', 'CITED1', 'ZBTB16', 'CYP26A1', 'TMEM40', 'TMSB15A', 'PVALB', 'ANKK1', 'WFDC3', 'MAPT.IT1', 'ROPN1L', 'MYO3B', 'GZMM', 'CDHR1', 'FIRRE', 'M1AP', 'MRAP2', 'INE2', 'RFX8', 'TTC23L', 'IGSF22', 'CRTAC1', 'RBM12B.AS1', 'SPAG17', 'MROH7', 'KCNT2', 'PYGM', 'PCDHA12', 'CFAP61', 'BTC', 'HEATR4', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'NWD1', 'CLEC4E', 'LRRC4B', 'SRSF12', 'B3GAT1', 'CCBE1', 'OPCML', 'ADGRF1', 'MIA', 'LINC00173', 'TMEM59L', 'CIDEC', 'HPDL', 'NLRP7', 'RNF182', 'FRMPD1', 'SMC1B', 'KCNA6', 'KLK6', 'ABCC6P2', 'FASLG', 'IL11', 'LOC613037', 'LSAMP', 'GALNT13', 'TSPAN8', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'C15ORF56', 'FAM83A', 'COL28A1', 'PSORS1C1', 'ANO5', 'SLC6A14', 'SLC16A11', 'PTCHD1', 'TMPRSS4', 'C9ORF47', 'ADGRG2', 'SLC24A5', 'TUSC5', 'CYP4F12', 'LOC100133669', 'RUFY4', 'LINC00908', 'KCNQ3', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'VENTX', 'NBPF4', 'MYOM2', 'FAM157A', 'EBF2', 'MAG', 'DSCAML1', 'PTPRN', 'PCDHA5', 'KLK7', 'CCNI2', 'CDKN2B.AS1', 'SYT6', 'DLX2', 'SFTPA2', 'ZBTB20', 'NKX3.2', 'DLX5', 'FAM19A2', 'PLAC1', 'BRE.AS1', 'CNTN2', 'OR2W3', 'SLC6A17', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'TFAP2E', 'CD160', 'ABCD2', 'CD1A', 'GRIA2', 'CCDC144A', 'DEFB1', 'RGS9', 'CACNA1I', 'GGT3P', 'DLK2', 'MYO16', 'PWAR5', 'CDKL2', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CABP4', 'CHRNA10', 'TCEAL2', 'UNC13A', 'FKBP1AP1', 'LY6H', 'AGBL4', 'SLC39A2', 'XCL2', 'TUBAL3', 'S100A7', 'SPAG8', 'PCBP3', 'MPL', 'KCNH3', 'LINC00202.1', 'ARL9', 'TM6SF2', 'ZNF727', 'GRID2IP', 'P2RY12', 'MAK', 'TCN1', 'HRCT1', 'SNORD116.4', 'ELOVL3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'GPM6A', 'CD70', 'SYCE3', 'SYCE2', 'PGLYRP2', 'TIGD4', 'GRIN2A', 'JAKMIP1', 'ARMC3', 'BAIAP2L2', 'RAB9B', 'CTAGE6', 'MKRN3', 'SOSTDC1', 'ASIC3', 'KLF3.AS1', 'LONRF3', 'AGAP7P', 'LRRC43', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'LOC400927', 'ACHE', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'HRC', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'GPR82', 'CHODL', 'CXADRP3', 'TTBK1', 'LOC285593', 'PAH', 'TTYH1', 'HIST1H2BH', 'ADGRL3', 'MLLT4.AS1', 'APOBEC3A', 'CHST9', 'GABRB3', 'SLC25A34', 'MAPK4', 'BRSK2', 'TRH', 'DNASE1L2', 'C8ORF46', 'ST8SIA2', 'CAMK4', 'DGCR5', 'EPYC', 'GBP6', 'GPR63', 'CAPSL', 'MUC15', 'ANKLE1', 'IL17D', 'SLC35F3', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'HAMP', 'MYO15A', 'RMRP', 'FAM201A', 'TNFSF11', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'RHCE', 'DCLK3', 'PTX3', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'RUNDC3A', 'ROPN1B', 'CYP2E1', 'LOC100132215', 'KCNK17', 'FOLR1', 'RRN3P1', 'UCKL1.AS1', 'LINC00961', 'C1QL3', 'PNMA6A', 'CYTL1', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'THSD7B', 'ATP13A4', 'MT1L', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'LIN7A', 'IL1RL1', 'CCR10', 'KISS1R', 'TMEM150B', 'ZMAT4', 'IL24', 'KIF19', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'DPEP1', 'TTLL9', 'WBP2NL', 'A2ML1', 'NIPAL4', 'PRRT4', 'RHBG', 'GPR135', 'KIAA1210', 'LOC90246', 'CNTNAP3', 'RRAD', 'CD300LB', 'PCDHB18P', 'CBLN1', 'B3GALT5', 'GNMT', 'FIGF', 'OXGR1', 'DPF3', 'IL18RAP', 'MAP7D2', 'SLC5A8', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'LRRC24', 'AIM2', 'RAB39A', 'TRIM7', 'PCDH20', 'GABRB2', 'FOXN1', 'TIFAB', 'PHKG1', 'PON3', 'DNAH11', 'MASP2', 'KLK8', 'WFIKKN1', 'CD19', 'CRB2', 'GPR171', 'FREM2', 'DCST2', 'WNT10A', 'LINC00669', 'C19ORF45', 'CLCA2', 'ANK1', 'SLC26A3', 'KCNB1', 'SEPHS1P1', 'HIST1H2AG', 'LINC01465', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'NEURL3', 'RIC3', 'COLCA1', 'CD1E', 'HNRNPCL3', 'TTC41P', 'ANO2', 'MED12L', 'LOC646999', 'CST2', 'PCDHGC5', 'EYA1', 'NRXN1', 'RAB3B', 'MYEOV', 'FAM182B', 'IL6', 'SEC14L1P1', 'CLPSL1', 'STXBP6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'LPAR4', 'CXCR2', 'KIF4B', 'MSLN', 'CR2', 'FNDC8', 'AJAP1', 'CLDN14', 'PATL2', 'TDRD9', 'ZNF676', 'CLEC4F', 'KCNRG', 'C9ORF117', 'FAM43B', 'HAPLN1', 'ABHD1', 'MAGEL2', 'NDP', 'VIT', 'TRABD2A', 'PDCD1', 'TSPAN32', 'MKX', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 5.152960652239924e-15 NRMSE: 8.057166214119184e-16 MAPE: 4.54872099727944e-12 Pearson Correlation: 0.015622442090427067 Spearman Correlation: 0.06797873378207006 Coefficient of Determination: -1.6304165697935629 RMSE: 0.8297904038815619 NRMSE: 0.2783037308430245 MAPE: 562.2302039488616 Predictor: ElasticNet Pearson Correlation: 0.8607765505378948 Spearman Correlation: 0.8179750610408735 Coefficient of Determination: 0.6570394987647381 RMSE: 0.36528542795905466 NRMSE: 0.057116007811594816 MAPE: 145.65974018033899 Pearson Correlation: 0.15484086364912836 Spearman Correlation: 0.1726612037849966 Coefficient of Determination: -0.16300849310542942 RMSE: 0.5517566617876296 NRMSE: 0.1850538844203212 MAPE: 792.8937892916275 Predictor: RandomForests Pearson Correlation: 0.5229592529112667 Spearman Correlation: 0.4965842838309955 Coefficient of Determination: 0.16199363036094028 RMSE: 0.5709971687438133 NRMSE: 0.08928108337797097 MAPE: 303.4679801998932 Pearson Correlation: 0.2702381156522618 Spearman Correlation: 0.287689005950639 Coefficient of Determination: 0.06981824863264519 RMSE: 0.4934464738491904 NRMSE: 0.165497207488996 MAPE: 286.38583297240467 Protein: BRCA2 x_train_column_count: 1002 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'IQUB', 'LINC01119', 'CBLN4', 'NKPD1', 'LINC01341', 'SOX8', 'EYS', 'ECT2L', 'PAX2', 'FXYD1', 'PPP1R3G', 'RNF138P1', 'CCR8', 'CCIN', 'MYCBPAP', 'XPNPEP2', 'ETV2', 'TEKT3', 'STKLD1', 'SLC30A8', 'C19ORF18', 'UGT8', 'SLC28A3', 'JPH4', 'UBE2Q2P1', 'METTL7B', 'SLC25A18', 'HEPACAM2', 'CASQ1', 'PLP1', 'TEX14', 'IDI2.AS1', 'S100A3', 'GLIS1', 'SGK2', 'ZNF843', 'LRIT3', 'CCDC36', 'NR1I3', 'LINC00482', 'ALOXE3', 'CACNG1', 'WNT2B', 'MS4A15', 'PBX4', 'ZIC2', 'ST6GALNAC1', 'GTSE1.AS1', 'ADAMTS8', 'PYGO1', 'LGALS2', 'TMEM92', 'FUT9', 'FCRL6', 'CCDC151', 'C9ORF43', 'PITX2', 'BCHE', 'PNCK', 'TNNI3K', 'AOC2', 'GJB1', 'DQX1', 'CKMT2', 'LPAR3', 'FAM189A1', 'ABCA17P', 'CACNA1G', 'C2ORF50', 'C1ORF101', 'NLRP12', 'ADCYAP1', 'ENPP6', 'SLC6A20', 'IYD', 'ZNF835', 'OTOA', 'CA3', 'SPIB', 'CLDN9', 'FAM95B1', 'FAM90A1', 'RYR2', 'C2CD4A', 'C1ORF95', 'PCDH9', 'LINC01550', 'CLEC3A', 'SVOPL', 'CCDC158', 'SCN2B', 'VSIG1', 'CLECL1', 'PCSK1N', 'IL20RB', 'ARC', 'CCDC65', 'TAS1R3', 'GSDMC', 'TTC16', 'AURKC', 'ZCCHC18', 'ULBP3', 'DDX11L2', 'DUOXA1', 'B3GALT5.AS1', 'ALDH8A1', 'KNDC1', 'COLCA2', 'GSTM1', 'PCYT1B', 'BPIFB2', 'MYOZ1', 'PDE1C', 'CRYGS', 'PPP1R36', 'TARP', 'KLHL4', 'LOC148709', 'LUZP2', 'LOC441455', 'JPH3', 'CPEB1', 'IL22RA1', 'HOXD3', 'FAM57B', 'LOC90768', 'CAMP', 'OR7E91P', 'FLJ37201', 'RIMS1', 'IL12RB2', 'RELN', 'LBX2', 'FUT7', 'SCARA5', 'PLA2G5', 'KCNE1', 'IGSF5', 'TUBB8', 'HIST1H2BN', 'GPR18', 'ZBED3.AS1', 'SLC22A18AS', 'HOXB13', 'CD177', 'ZC3H12D', 'MNX1', 'ASTN1', 'CIDEA', 'TCHH', 'ONECUT2', 'C10ORF128', 'GAL', 'SP5', 'WDR72', 'CHRNA6', 'KCNE2', 'IRX4', 'FAM135B', 'BTBD8', 'SLC16A10', 'RSPH4A', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'MGC16142', 'CCDC7', 'DCSTAMP', 'CELF5', 'GRIN2C', 'MGAT5B', 'GBP1P1', 'CXXC4', 'YPEL4', 'GPR3', 'CXCR5', 'HOXA11', 'SLC30A2', 'OBP2B', 'SLC35F1', 'ATP13A5', 'NIPAL1', 'PYDC1', 'SKIDA1', 'CCDC153', 'RPGRIP1', 'SRL', 'STRC', 'WT1', 'TNFRSF9', 'LRP1B', 'PCSK9', 'PCAT18', 'FOXJ1', 'SLC18A2', 'PPP4R4', 'NOXO1', 'PCK1', 'INSM1', 'CNNM1', 'GPR174', 'MARCO', 'SLC25A53', 'C17ORF104', 'FOXD4', 'DMRT3', 'GPX2', 'INHA', 'COL23A1', 'NOS2', 'ADH1C', 'FOXD1', 'PKNOX2', 'KLHL14', 'BTLA', 'CRISP3', 'LBP', 'IL20', 'TNFRSF17', 'AVPR2', 'GLOD5', 'MYBPC1', 'PARP15', 'CXCL2', 'GPLD1', 'PFN1P2', 'CST9', 'GPR55', 'SLCO4C1', 'SLC23A1', 'STEAP1B', 'C2ORF40', 'BCL2L14', 'DHRS4L1', 'SCN3A', 'AMH', 'ULBP2', 'CXCR2P1', 'VAT1L', 'ZNF98', 'VSIG2', 'RNF212', 'VGLL1', 'HAP1', 'CYSLTR2', 'ZNF454', 'TPSG1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'ORM1', 'ZNF488', 'TMEM105', 'FAM178B', 'P2RX1', 'DKK1', 'DPY19L2P2', 'IL23A', 'SIGLEC17P', 'CRYM', 'PRKG2', 'CXCL1', 'AMBP', 'BRINP1', 'CTCFL', 'SUCNR1', 'DEPDC4', 'FABP7', 'SPDYE1', 'LRRC2', 'GPBAR1', 'XIRP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'FUT6', 'RERGL', 'BDKRB1', 'TENM1', 'LINC00930', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'NUGGC', 'KIAA0319', 'CECR2', 'SORCS1', 'ABHD11.AS1', 'PCDHGA3', 'PKD1L1', 'FAM184B', 'ECEL1', 'CBLN2', 'WSCD2', 'SPESP1', 'SEC14L5', 'SSUH2', 'FSCN2', 'DMRT2', 'FAM162B', 'CCL17', 'ZNF732', 'HOXD4', 'PIANP', 'TMEM217', 'GRIA3', 'CTSG', 'GNB3', 'RSPO1', 'RGS6', 'COL2A1', 'SERPINA6', 'MT1A', 'ADAMTS19', 'IL1R2', 'RNF175', 'CHRNB2', 'ADAM32', 'FLJ12825', 'RASL10A', 'PFKFB1', 'POM121L9P', 'HECTD2.AS1', 'DIRC3', 'PRSS21', 'SMIM5', 'CYP46A1', 'LRRC16B', 'CAPN11', 'IGF2BP3', 'VIPR2', 'TRAT1', 'ZNF804A', 'TBX21', 'HIST1H2BE', 'GPR87', 'LOC100126784', 'CYSRT1', 'PART1', 'FOXC2', 'HOGA1', 'EMX1', 'CA9', 'ZSCAN1', 'HTR7', 'CEP83.AS1', 'SLC13A2', 'XKR9', 'WIPF3', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'OTUD7A', 'CITED1', 'ZBTB16', 'CYP26A1', 'TMEM40', 'TMSB15A', 'PVALB', 'ANKK1', 'WFDC3', 'MAPT.IT1', 'ROPN1L', 'MYO3B', 'GZMM', 'CDHR1', 'FIRRE', 'M1AP', 'MRAP2', 'INE2', 'RFX8', 'TTC23L', 'IGSF22', 'CRTAC1', 'RBM12B.AS1', 'SPAG17', 'MROH7', 'KCNT2', 'PYGM', 'PCDHA12', 'CFAP61', 'BTC', 'HEATR4', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'NWD1', 'CLEC4E', 'LRRC4B', 'SRSF12', 'B3GAT1', 'CCBE1', 'OPCML', 'ADGRF1', 'MIA', 'LINC00173', 'TMEM59L', 'CIDEC', 'HPDL', 'NLRP7', 'RNF182', 'FRMPD1', 'SMC1B', 'KCNA6', 'KLK6', 'ABCC6P2', 'FASLG', 'IL11', 'LOC613037', 'LSAMP', 'GALNT13', 'TSPAN8', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'C15ORF56', 'FAM83A', 'COL28A1', 'PSORS1C1', 'ANO5', 'SLC6A14', 'SLC16A11', 'PTCHD1', 'TMPRSS4', 'C9ORF47', 'ADGRG2', 'SLC24A5', 'TUSC5', 'CYP4F12', 'LOC100133669', 'RUFY4', 'LINC00908', 'KCNQ3', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'VENTX', 'NBPF4', 'MYOM2', 'FAM157A', 'EBF2', 'MAG', 'DSCAML1', 'PTPRN', 'PCDHA5', 'KLK7', 'CCNI2', 'CDKN2B.AS1', 'SYT6', 'DLX2', 'SFTPA2', 'ZBTB20', 'NKX3.2', 'DLX5', 'FAM19A2', 'PLAC1', 'BRE.AS1', 'CNTN2', 'OR2W3', 'SLC6A17', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'TFAP2E', 'CD160', 'ABCD2', 'CD1A', 'GRIA2', 'CCDC144A', 'DEFB1', 'RGS9', 'CACNA1I', 'GGT3P', 'DLK2', 'MYO16', 'PWAR5', 'CDKL2', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CABP4', 'CHRNA10', 'TCEAL2', 'UNC13A', 'FKBP1AP1', 'LY6H', 'AGBL4', 'SLC39A2', 'XCL2', 'TUBAL3', 'S100A7', 'SPAG8', 'PCBP3', 'MPL', 'KCNH3', 'LINC00202.1', 'ARL9', 'TM6SF2', 'ZNF727', 'GRID2IP', 'P2RY12', 'MAK', 'TCN1', 'HRCT1', 'SNORD116.4', 'ELOVL3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'GPM6A', 'CD70', 'SYCE3', 'SYCE2', 'PGLYRP2', 'TIGD4', 'GRIN2A', 'JAKMIP1', 'ARMC3', 'BAIAP2L2', 'RAB9B', 'CTAGE6', 'MKRN3', 'SOSTDC1', 'ASIC3', 'KLF3.AS1', 'LONRF3', 'AGAP7P', 'LRRC43', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'LOC400927', 'ACHE', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'HRC', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'GPR82', 'CHODL', 'CXADRP3', 'TTBK1', 'LOC285593', 'PAH', 'TTYH1', 'HIST1H2BH', 'ADGRL3', 'MLLT4.AS1', 'APOBEC3A', 'CHST9', 'GABRB3', 'SLC25A34', 'MAPK4', 'BRSK2', 'TRH', 'DNASE1L2', 'C8ORF46', 'ST8SIA2', 'CAMK4', 'DGCR5', 'EPYC', 'GBP6', 'GPR63', 'CAPSL', 'MUC15', 'ANKLE1', 'IL17D', 'SLC35F3', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'HAMP', 'MYO15A', 'RMRP', 'FAM201A', 'TNFSF11', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'RHCE', 'DCLK3', 'PTX3', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'RUNDC3A', 'ROPN1B', 'CYP2E1', 'LOC100132215', 'KCNK17', 'FOLR1', 'RRN3P1', 'UCKL1.AS1', 'LINC00961', 'C1QL3', 'PNMA6A', 'CYTL1', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'THSD7B', 'ATP13A4', 'MT1L', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'LIN7A', 'IL1RL1', 'CCR10', 'KISS1R', 'TMEM150B', 'ZMAT4', 'IL24', 'KIF19', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'DPEP1', 'TTLL9', 'WBP2NL', 'A2ML1', 'NIPAL4', 'PRRT4', 'RHBG', 'GPR135', 'KIAA1210', 'LOC90246', 'CNTNAP3', 'RRAD', 'CD300LB', 'PCDHB18P', 'CBLN1', 'B3GALT5', 'GNMT', 'FIGF', 'OXGR1', 'DPF3', 'IL18RAP', 'MAP7D2', 'SLC5A8', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'LRRC24', 'AIM2', 'RAB39A', 'TRIM7', 'PCDH20', 'GABRB2', 'FOXN1', 'TIFAB', 'PHKG1', 'PON3', 'DNAH11', 'MASP2', 'KLK8', 'WFIKKN1', 'CD19', 'CRB2', 'GPR171', 'FREM2', 'DCST2', 'WNT10A', 'LINC00669', 'C19ORF45', 'CLCA2', 'ANK1', 'SLC26A3', 'KCNB1', 'SEPHS1P1', 'HIST1H2AG', 'LINC01465', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'NEURL3', 'RIC3', 'COLCA1', 'CD1E', 'HNRNPCL3', 'TTC41P', 'ANO2', 'MED12L', 'LOC646999', 'CST2', 'PCDHGC5', 'EYA1', 'NRXN1', 'RAB3B', 'MYEOV', 'FAM182B', 'IL6', 'SEC14L1P1', 'CLPSL1', 'STXBP6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'LPAR4', 'CXCR2', 'KIF4B', 'MSLN', 'CR2', 'FNDC8', 'AJAP1', 'CLDN14', 'PATL2', 'TDRD9', 'ZNF676', 'CLEC4F', 'KCNRG', 'C9ORF117', 'FAM43B', 'HAPLN1', 'ABHD1', 'MAGEL2', 'NDP', 'VIT', 'TRABD2A', 'PDCD1', 'TSPAN32', 'MKX', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.9999999999999996 Spearman Correlation: 0.9999999225074571 Coefficient of Determination: 1.0 RMSE: 1.380871820236656e-15 NRMSE: 8.895936996209735e-16 MAPE: 3.2882620143025367e-12 Pearson Correlation: -0.039216257516028065 Spearman Correlation: 0.005701882743147011 Coefficient of Determination: -1.1784911759121024 RMSE: 0.28513957477873947 NRMSE: 0.19301007545960583 MAPE: 493.71644143386646 Predictor: ElasticNet Pearson Correlation: 0.5741954350269576 Spearman Correlation: 0.54907699791088 Coefficient of Determination: 0.24978463618122249 RMSE: 0.16918017339297772 NRMSE: 0.10899028725590448 MAPE: 195.30759296474326 Pearson Correlation: 0.35282649898215385 Spearman Correlation: 0.3623744024973174 Coefficient of Determination: 0.10661719148700066 RMSE: 0.18259899821673742 NRMSE: 0.12360068381251137 MAPE: 156.6459905626768 Predictor: RandomForests Pearson Correlation: 0.5535636108725306 Spearman Correlation: 0.5355139813213533 Coefficient of Determination: 0.1622088686312606 RMSE: 0.17878223744621122 NRMSE: 0.11517618775726284 MAPE: 149.05609935076615 Pearson Correlation: 0.26658326097182794 Spearman Correlation: 0.2549214710759926 Coefficient of Determination: 0.044736004981184574 RMSE: 0.1888170897525934 NRMSE: 0.127809690287609 MAPE: 134.5747987811959 Protein: CDKN2A x_train_column_count: 1002 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'IQUB', 'LINC01119', 'CBLN4', 'NKPD1', 'LINC01341', 'SOX8', 'EYS', 'ECT2L', 'PAX2', 'FXYD1', 'PPP1R3G', 'RNF138P1', 'CCR8', 'CCIN', 'MYCBPAP', 'XPNPEP2', 'ETV2', 'TEKT3', 'STKLD1', 'SLC30A8', 'C19ORF18', 'UGT8', 'SLC28A3', 'JPH4', 'UBE2Q2P1', 'METTL7B', 'SLC25A18', 'HEPACAM2', 'CASQ1', 'PLP1', 'TEX14', 'IDI2.AS1', 'S100A3', 'GLIS1', 'SGK2', 'ZNF843', 'LRIT3', 'CCDC36', 'NR1I3', 'LINC00482', 'ALOXE3', 'CACNG1', 'WNT2B', 'MS4A15', 'PBX4', 'ZIC2', 'ST6GALNAC1', 'GTSE1.AS1', 'ADAMTS8', 'PYGO1', 'LGALS2', 'TMEM92', 'FUT9', 'FCRL6', 'CCDC151', 'C9ORF43', 'PITX2', 'BCHE', 'PNCK', 'TNNI3K', 'AOC2', 'GJB1', 'DQX1', 'CKMT2', 'LPAR3', 'FAM189A1', 'ABCA17P', 'CACNA1G', 'C2ORF50', 'C1ORF101', 'NLRP12', 'ADCYAP1', 'ENPP6', 'SLC6A20', 'IYD', 'ZNF835', 'OTOA', 'CA3', 'SPIB', 'CLDN9', 'FAM95B1', 'FAM90A1', 'RYR2', 'C2CD4A', 'C1ORF95', 'PCDH9', 'LINC01550', 'CLEC3A', 'SVOPL', 'CCDC158', 'SCN2B', 'VSIG1', 'CLECL1', 'PCSK1N', 'IL20RB', 'ARC', 'CCDC65', 'TAS1R3', 'GSDMC', 'TTC16', 'AURKC', 'ZCCHC18', 'ULBP3', 'DDX11L2', 'DUOXA1', 'B3GALT5.AS1', 'ALDH8A1', 'KNDC1', 'COLCA2', 'GSTM1', 'PCYT1B', 'BPIFB2', 'MYOZ1', 'PDE1C', 'CRYGS', 'PPP1R36', 'TARP', 'KLHL4', 'LOC148709', 'LUZP2', 'LOC441455', 'JPH3', 'CPEB1', 'IL22RA1', 'HOXD3', 'FAM57B', 'LOC90768', 'CAMP', 'OR7E91P', 'FLJ37201', 'RIMS1', 'IL12RB2', 'RELN', 'LBX2', 'FUT7', 'SCARA5', 'PLA2G5', 'KCNE1', 'IGSF5', 'TUBB8', 'HIST1H2BN', 'GPR18', 'ZBED3.AS1', 'SLC22A18AS', 'HOXB13', 'CD177', 'ZC3H12D', 'MNX1', 'ASTN1', 'CIDEA', 'TCHH', 'ONECUT2', 'C10ORF128', 'GAL', 'SP5', 'WDR72', 'CHRNA6', 'KCNE2', 'IRX4', 'FAM135B', 'BTBD8', 'SLC16A10', 'RSPH4A', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'MGC16142', 'CCDC7', 'DCSTAMP', 'CELF5', 'GRIN2C', 'MGAT5B', 'GBP1P1', 'CXXC4', 'YPEL4', 'GPR3', 'CXCR5', 'HOXA11', 'SLC30A2', 'OBP2B', 'SLC35F1', 'ATP13A5', 'NIPAL1', 'PYDC1', 'SKIDA1', 'CCDC153', 'RPGRIP1', 'SRL', 'STRC', 'WT1', 'TNFRSF9', 'LRP1B', 'PCSK9', 'PCAT18', 'FOXJ1', 'SLC18A2', 'PPP4R4', 'NOXO1', 'PCK1', 'INSM1', 'CNNM1', 'GPR174', 'MARCO', 'SLC25A53', 'C17ORF104', 'FOXD4', 'DMRT3', 'GPX2', 'INHA', 'COL23A1', 'NOS2', 'ADH1C', 'FOXD1', 'PKNOX2', 'KLHL14', 'BTLA', 'CRISP3', 'LBP', 'IL20', 'TNFRSF17', 'AVPR2', 'GLOD5', 'MYBPC1', 'PARP15', 'CXCL2', 'GPLD1', 'PFN1P2', 'CST9', 'GPR55', 'SLCO4C1', 'SLC23A1', 'STEAP1B', 'C2ORF40', 'BCL2L14', 'DHRS4L1', 'SCN3A', 'AMH', 'ULBP2', 'CXCR2P1', 'VAT1L', 'ZNF98', 'VSIG2', 'RNF212', 'VGLL1', 'HAP1', 'CYSLTR2', 'ZNF454', 'TPSG1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'ORM1', 'ZNF488', 'TMEM105', 'FAM178B', 'P2RX1', 'DKK1', 'DPY19L2P2', 'IL23A', 'SIGLEC17P', 'CRYM', 'PRKG2', 'CXCL1', 'AMBP', 'BRINP1', 'CTCFL', 'SUCNR1', 'DEPDC4', 'FABP7', 'SPDYE1', 'LRRC2', 'GPBAR1', 'XIRP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'FUT6', 'RERGL', 'BDKRB1', 'TENM1', 'LINC00930', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'NUGGC', 'KIAA0319', 'CECR2', 'SORCS1', 'ABHD11.AS1', 'PCDHGA3', 'PKD1L1', 'FAM184B', 'ECEL1', 'CBLN2', 'WSCD2', 'SPESP1', 'SEC14L5', 'SSUH2', 'FSCN2', 'DMRT2', 'FAM162B', 'CCL17', 'ZNF732', 'HOXD4', 'PIANP', 'TMEM217', 'GRIA3', 'CTSG', 'GNB3', 'RSPO1', 'RGS6', 'COL2A1', 'SERPINA6', 'MT1A', 'ADAMTS19', 'IL1R2', 'RNF175', 'CHRNB2', 'ADAM32', 'FLJ12825', 'RASL10A', 'PFKFB1', 'POM121L9P', 'HECTD2.AS1', 'DIRC3', 'PRSS21', 'SMIM5', 'CYP46A1', 'LRRC16B', 'CAPN11', 'IGF2BP3', 'VIPR2', 'TRAT1', 'ZNF804A', 'TBX21', 'HIST1H2BE', 'GPR87', 'LOC100126784', 'CYSRT1', 'PART1', 'FOXC2', 'HOGA1', 'EMX1', 'CA9', 'ZSCAN1', 'HTR7', 'CEP83.AS1', 'SLC13A2', 'XKR9', 'WIPF3', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'OTUD7A', 'CITED1', 'ZBTB16', 'CYP26A1', 'TMEM40', 'TMSB15A', 'PVALB', 'ANKK1', 'WFDC3', 'MAPT.IT1', 'ROPN1L', 'MYO3B', 'GZMM', 'CDHR1', 'FIRRE', 'M1AP', 'MRAP2', 'INE2', 'RFX8', 'TTC23L', 'IGSF22', 'CRTAC1', 'RBM12B.AS1', 'SPAG17', 'MROH7', 'KCNT2', 'PYGM', 'PCDHA12', 'CFAP61', 'BTC', 'HEATR4', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'NWD1', 'CLEC4E', 'LRRC4B', 'SRSF12', 'B3GAT1', 'CCBE1', 'OPCML', 'ADGRF1', 'MIA', 'LINC00173', 'TMEM59L', 'CIDEC', 'HPDL', 'NLRP7', 'RNF182', 'FRMPD1', 'SMC1B', 'KCNA6', 'KLK6', 'ABCC6P2', 'FASLG', 'IL11', 'LOC613037', 'LSAMP', 'GALNT13', 'TSPAN8', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'C15ORF56', 'FAM83A', 'COL28A1', 'PSORS1C1', 'ANO5', 'SLC6A14', 'SLC16A11', 'PTCHD1', 'TMPRSS4', 'C9ORF47', 'ADGRG2', 'SLC24A5', 'TUSC5', 'CYP4F12', 'LOC100133669', 'RUFY4', 'LINC00908', 'KCNQ3', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'VENTX', 'NBPF4', 'MYOM2', 'FAM157A', 'EBF2', 'MAG', 'DSCAML1', 'PTPRN', 'PCDHA5', 'KLK7', 'CCNI2', 'CDKN2B.AS1', 'SYT6', 'DLX2', 'SFTPA2', 'ZBTB20', 'NKX3.2', 'DLX5', 'FAM19A2', 'PLAC1', 'BRE.AS1', 'CNTN2', 'OR2W3', 'SLC6A17', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'TFAP2E', 'CD160', 'ABCD2', 'CD1A', 'GRIA2', 'CCDC144A', 'DEFB1', 'RGS9', 'CACNA1I', 'GGT3P', 'DLK2', 'MYO16', 'PWAR5', 'CDKL2', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CABP4', 'CHRNA10', 'TCEAL2', 'UNC13A', 'FKBP1AP1', 'LY6H', 'AGBL4', 'SLC39A2', 'XCL2', 'TUBAL3', 'S100A7', 'SPAG8', 'PCBP3', 'MPL', 'KCNH3', 'LINC00202.1', 'ARL9', 'TM6SF2', 'ZNF727', 'GRID2IP', 'P2RY12', 'MAK', 'TCN1', 'HRCT1', 'SNORD116.4', 'ELOVL3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'GPM6A', 'CD70', 'SYCE3', 'SYCE2', 'PGLYRP2', 'TIGD4', 'GRIN2A', 'JAKMIP1', 'ARMC3', 'BAIAP2L2', 'RAB9B', 'CTAGE6', 'MKRN3', 'SOSTDC1', 'ASIC3', 'KLF3.AS1', 'LONRF3', 'AGAP7P', 'LRRC43', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'LOC400927', 'ACHE', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'HRC', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'GPR82', 'CHODL', 'CXADRP3', 'TTBK1', 'LOC285593', 'PAH', 'TTYH1', 'HIST1H2BH', 'ADGRL3', 'MLLT4.AS1', 'APOBEC3A', 'CHST9', 'GABRB3', 'SLC25A34', 'MAPK4', 'BRSK2', 'TRH', 'DNASE1L2', 'C8ORF46', 'ST8SIA2', 'CAMK4', 'DGCR5', 'EPYC', 'GBP6', 'GPR63', 'CAPSL', 'MUC15', 'ANKLE1', 'IL17D', 'SLC35F3', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'HAMP', 'MYO15A', 'RMRP', 'FAM201A', 'TNFSF11', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'RHCE', 'DCLK3', 'PTX3', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'RUNDC3A', 'ROPN1B', 'CYP2E1', 'LOC100132215', 'KCNK17', 'FOLR1', 'RRN3P1', 'UCKL1.AS1', 'LINC00961', 'C1QL3', 'PNMA6A', 'CYTL1', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'THSD7B', 'ATP13A4', 'MT1L', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'LIN7A', 'IL1RL1', 'CCR10', 'KISS1R', 'TMEM150B', 'ZMAT4', 'IL24', 'KIF19', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'DPEP1', 'TTLL9', 'WBP2NL', 'A2ML1', 'NIPAL4', 'PRRT4', 'RHBG', 'GPR135', 'KIAA1210', 'LOC90246', 'CNTNAP3', 'RRAD', 'CD300LB', 'PCDHB18P', 'CBLN1', 'B3GALT5', 'GNMT', 'FIGF', 'OXGR1', 'DPF3', 'IL18RAP', 'MAP7D2', 'SLC5A8', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'LRRC24', 'AIM2', 'RAB39A', 'TRIM7', 'PCDH20', 'GABRB2', 'FOXN1', 'TIFAB', 'PHKG1', 'PON3', 'DNAH11', 'MASP2', 'KLK8', 'WFIKKN1', 'CD19', 'CRB2', 'GPR171', 'FREM2', 'DCST2', 'WNT10A', 'LINC00669', 'C19ORF45', 'CLCA2', 'ANK1', 'SLC26A3', 'KCNB1', 'SEPHS1P1', 'HIST1H2AG', 'LINC01465', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'NEURL3', 'RIC3', 'COLCA1', 'CD1E', 'HNRNPCL3', 'TTC41P', 'ANO2', 'MED12L', 'LOC646999', 'CST2', 'PCDHGC5', 'EYA1', 'NRXN1', 'RAB3B', 'MYEOV', 'FAM182B', 'IL6', 'SEC14L1P1', 'CLPSL1', 'STXBP6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'LPAR4', 'CXCR2', 'KIF4B', 'MSLN', 'CR2', 'FNDC8', 'AJAP1', 'CLDN14', 'PATL2', 'TDRD9', 'ZNF676', 'CLEC4F', 'KCNRG', 'C9ORF117', 'FAM43B', 'HAPLN1', 'ABHD1', 'MAGEL2', 'NDP', 'VIT', 'TRABD2A', 'PDCD1', 'TSPAN32', 'MKX', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 2.9891944874506764e-15 NRMSE: 6.75753246852193e-16 MAPE: 3.255712808016093e-12 Pearson Correlation: 0.3476098386768072 Spearman Correlation: 0.35131694468832314 Coefficient of Determination: -0.25593907115941894 RMSE: 0.754706752823429 NRMSE: 0.20388663086865924 MAPE: 545.0657710036635 Predictor: ElasticNet Pearson Correlation: 0.8768972288399276 Spearman Correlation: 0.8561101472761217 Coefficient of Determination: 0.713318055980908 RMSE: 0.35517274569517454 NRMSE: 0.08029224498591037 MAPE: 387.9311749053509 Pearson Correlation: 0.43855902460138413 Spearman Correlation: 0.3793288459662473 Coefficient of Determination: 0.16079285227915463 RMSE: 0.6169195560942674 NRMSE: 0.1666629446980407 MAPE: 307.8493132808851 Predictor: RandomForests Pearson Correlation: 0.5786750703679998 Spearman Correlation: 0.5232422599676329 Coefficient of Determination: 0.2510981103129899 RMSE: 0.5740529134923913 NRMSE: 0.12977346298008166 MAPE: 257.16187501510177 Pearson Correlation: 0.4572057941415234 Spearman Correlation: 0.3696761291581309 Coefficient of Determination: 0.16990954880194375 RMSE: 0.6135594639630827 NRMSE: 0.1657552042260327 MAPE: 159.5322407420292 Protein: TP53 x_train_column_count: 1002 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'IQUB', 'LINC01119', 'CBLN4', 'NKPD1', 'LINC01341', 'SOX8', 'EYS', 'ECT2L', 'PAX2', 'FXYD1', 'PPP1R3G', 'RNF138P1', 'CCR8', 'CCIN', 'MYCBPAP', 'XPNPEP2', 'ETV2', 'TEKT3', 'STKLD1', 'SLC30A8', 'C19ORF18', 'UGT8', 'SLC28A3', 'JPH4', 'UBE2Q2P1', 'METTL7B', 'SLC25A18', 'HEPACAM2', 'CASQ1', 'PLP1', 'TEX14', 'IDI2.AS1', 'S100A3', 'GLIS1', 'SGK2', 'ZNF843', 'LRIT3', 'CCDC36', 'NR1I3', 'LINC00482', 'ALOXE3', 'CACNG1', 'WNT2B', 'MS4A15', 'PBX4', 'ZIC2', 'ST6GALNAC1', 'GTSE1.AS1', 'ADAMTS8', 'PYGO1', 'LGALS2', 'TMEM92', 'FUT9', 'FCRL6', 'CCDC151', 'C9ORF43', 'PITX2', 'BCHE', 'PNCK', 'TNNI3K', 'AOC2', 'GJB1', 'DQX1', 'CKMT2', 'LPAR3', 'FAM189A1', 'ABCA17P', 'CACNA1G', 'C2ORF50', 'C1ORF101', 'NLRP12', 'ADCYAP1', 'ENPP6', 'SLC6A20', 'IYD', 'ZNF835', 'OTOA', 'CA3', 'SPIB', 'CLDN9', 'FAM95B1', 'FAM90A1', 'RYR2', 'C2CD4A', 'C1ORF95', 'PCDH9', 'LINC01550', 'CLEC3A', 'SVOPL', 'CCDC158', 'SCN2B', 'VSIG1', 'CLECL1', 'PCSK1N', 'IL20RB', 'ARC', 'CCDC65', 'TAS1R3', 'GSDMC', 'TTC16', 'AURKC', 'ZCCHC18', 'ULBP3', 'DDX11L2', 'DUOXA1', 'B3GALT5.AS1', 'ALDH8A1', 'KNDC1', 'COLCA2', 'GSTM1', 'PCYT1B', 'BPIFB2', 'MYOZ1', 'PDE1C', 'CRYGS', 'PPP1R36', 'TARP', 'KLHL4', 'LOC148709', 'LUZP2', 'LOC441455', 'JPH3', 'CPEB1', 'IL22RA1', 'HOXD3', 'FAM57B', 'LOC90768', 'CAMP', 'OR7E91P', 'FLJ37201', 'RIMS1', 'IL12RB2', 'RELN', 'LBX2', 'FUT7', 'SCARA5', 'PLA2G5', 'KCNE1', 'IGSF5', 'TUBB8', 'HIST1H2BN', 'GPR18', 'ZBED3.AS1', 'SLC22A18AS', 'HOXB13', 'CD177', 'ZC3H12D', 'MNX1', 'ASTN1', 'CIDEA', 'TCHH', 'ONECUT2', 'C10ORF128', 'GAL', 'SP5', 'WDR72', 'CHRNA6', 'KCNE2', 'IRX4', 'FAM135B', 'BTBD8', 'SLC16A10', 'RSPH4A', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'MGC16142', 'CCDC7', 'DCSTAMP', 'CELF5', 'GRIN2C', 'MGAT5B', 'GBP1P1', 'CXXC4', 'YPEL4', 'GPR3', 'CXCR5', 'HOXA11', 'SLC30A2', 'OBP2B', 'SLC35F1', 'ATP13A5', 'NIPAL1', 'PYDC1', 'SKIDA1', 'CCDC153', 'RPGRIP1', 'SRL', 'STRC', 'WT1', 'TNFRSF9', 'LRP1B', 'PCSK9', 'PCAT18', 'FOXJ1', 'SLC18A2', 'PPP4R4', 'NOXO1', 'PCK1', 'INSM1', 'CNNM1', 'GPR174', 'MARCO', 'SLC25A53', 'C17ORF104', 'FOXD4', 'DMRT3', 'GPX2', 'INHA', 'COL23A1', 'NOS2', 'ADH1C', 'FOXD1', 'PKNOX2', 'KLHL14', 'BTLA', 'CRISP3', 'LBP', 'IL20', 'TNFRSF17', 'AVPR2', 'GLOD5', 'MYBPC1', 'PARP15', 'CXCL2', 'GPLD1', 'PFN1P2', 'CST9', 'GPR55', 'SLCO4C1', 'SLC23A1', 'STEAP1B', 'C2ORF40', 'BCL2L14', 'DHRS4L1', 'SCN3A', 'AMH', 'ULBP2', 'CXCR2P1', 'VAT1L', 'ZNF98', 'VSIG2', 'RNF212', 'VGLL1', 'HAP1', 'CYSLTR2', 'ZNF454', 'TPSG1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'ORM1', 'ZNF488', 'TMEM105', 'FAM178B', 'P2RX1', 'DKK1', 'DPY19L2P2', 'IL23A', 'SIGLEC17P', 'CRYM', 'PRKG2', 'CXCL1', 'AMBP', 'BRINP1', 'CTCFL', 'SUCNR1', 'DEPDC4', 'FABP7', 'SPDYE1', 'LRRC2', 'GPBAR1', 'XIRP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'FUT6', 'RERGL', 'BDKRB1', 'TENM1', 'LINC00930', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'NUGGC', 'KIAA0319', 'CECR2', 'SORCS1', 'ABHD11.AS1', 'PCDHGA3', 'PKD1L1', 'FAM184B', 'ECEL1', 'CBLN2', 'WSCD2', 'SPESP1', 'SEC14L5', 'SSUH2', 'FSCN2', 'DMRT2', 'FAM162B', 'CCL17', 'ZNF732', 'HOXD4', 'PIANP', 'TMEM217', 'GRIA3', 'CTSG', 'GNB3', 'RSPO1', 'RGS6', 'COL2A1', 'SERPINA6', 'MT1A', 'ADAMTS19', 'IL1R2', 'RNF175', 'CHRNB2', 'ADAM32', 'FLJ12825', 'RASL10A', 'PFKFB1', 'POM121L9P', 'HECTD2.AS1', 'DIRC3', 'PRSS21', 'SMIM5', 'CYP46A1', 'LRRC16B', 'CAPN11', 'IGF2BP3', 'VIPR2', 'TRAT1', 'ZNF804A', 'TBX21', 'HIST1H2BE', 'GPR87', 'LOC100126784', 'CYSRT1', 'PART1', 'FOXC2', 'HOGA1', 'EMX1', 'CA9', 'ZSCAN1', 'HTR7', 'CEP83.AS1', 'SLC13A2', 'XKR9', 'WIPF3', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'OTUD7A', 'CITED1', 'ZBTB16', 'CYP26A1', 'TMEM40', 'TMSB15A', 'PVALB', 'ANKK1', 'WFDC3', 'MAPT.IT1', 'ROPN1L', 'MYO3B', 'GZMM', 'CDHR1', 'FIRRE', 'M1AP', 'MRAP2', 'INE2', 'RFX8', 'TTC23L', 'IGSF22', 'CRTAC1', 'RBM12B.AS1', 'SPAG17', 'MROH7', 'KCNT2', 'PYGM', 'PCDHA12', 'CFAP61', 'BTC', 'HEATR4', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'NWD1', 'CLEC4E', 'LRRC4B', 'SRSF12', 'B3GAT1', 'CCBE1', 'OPCML', 'ADGRF1', 'MIA', 'LINC00173', 'TMEM59L', 'CIDEC', 'HPDL', 'NLRP7', 'RNF182', 'FRMPD1', 'SMC1B', 'KCNA6', 'KLK6', 'ABCC6P2', 'FASLG', 'IL11', 'LOC613037', 'LSAMP', 'GALNT13', 'TSPAN8', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'C15ORF56', 'FAM83A', 'COL28A1', 'PSORS1C1', 'ANO5', 'SLC6A14', 'SLC16A11', 'PTCHD1', 'TMPRSS4', 'C9ORF47', 'ADGRG2', 'SLC24A5', 'TUSC5', 'CYP4F12', 'LOC100133669', 'RUFY4', 'LINC00908', 'KCNQ3', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'VENTX', 'NBPF4', 'MYOM2', 'FAM157A', 'EBF2', 'MAG', 'DSCAML1', 'PTPRN', 'PCDHA5', 'KLK7', 'CCNI2', 'CDKN2B.AS1', 'SYT6', 'DLX2', 'SFTPA2', 'ZBTB20', 'NKX3.2', 'DLX5', 'FAM19A2', 'PLAC1', 'BRE.AS1', 'CNTN2', 'OR2W3', 'SLC6A17', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'TFAP2E', 'CD160', 'ABCD2', 'CD1A', 'GRIA2', 'CCDC144A', 'DEFB1', 'RGS9', 'CACNA1I', 'GGT3P', 'DLK2', 'MYO16', 'PWAR5', 'CDKL2', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CABP4', 'CHRNA10', 'TCEAL2', 'UNC13A', 'FKBP1AP1', 'LY6H', 'AGBL4', 'SLC39A2', 'XCL2', 'TUBAL3', 'S100A7', 'SPAG8', 'PCBP3', 'MPL', 'KCNH3', 'LINC00202.1', 'ARL9', 'TM6SF2', 'ZNF727', 'GRID2IP', 'P2RY12', 'MAK', 'TCN1', 'HRCT1', 'SNORD116.4', 'ELOVL3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'GPM6A', 'CD70', 'SYCE3', 'SYCE2', 'PGLYRP2', 'TIGD4', 'GRIN2A', 'JAKMIP1', 'ARMC3', 'BAIAP2L2', 'RAB9B', 'CTAGE6', 'MKRN3', 'SOSTDC1', 'ASIC3', 'KLF3.AS1', 'LONRF3', 'AGAP7P', 'LRRC43', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'LOC400927', 'ACHE', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'HRC', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'GPR82', 'CHODL', 'CXADRP3', 'TTBK1', 'LOC285593', 'PAH', 'TTYH1', 'HIST1H2BH', 'ADGRL3', 'MLLT4.AS1', 'APOBEC3A', 'CHST9', 'GABRB3', 'SLC25A34', 'MAPK4', 'BRSK2', 'TRH', 'DNASE1L2', 'C8ORF46', 'ST8SIA2', 'CAMK4', 'DGCR5', 'EPYC', 'GBP6', 'GPR63', 'CAPSL', 'MUC15', 'ANKLE1', 'IL17D', 'SLC35F3', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'HAMP', 'MYO15A', 'RMRP', 'FAM201A', 'TNFSF11', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'RHCE', 'DCLK3', 'PTX3', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'RUNDC3A', 'ROPN1B', 'CYP2E1', 'LOC100132215', 'KCNK17', 'FOLR1', 'RRN3P1', 'UCKL1.AS1', 'LINC00961', 'C1QL3', 'PNMA6A', 'CYTL1', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'THSD7B', 'ATP13A4', 'MT1L', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'LIN7A', 'IL1RL1', 'CCR10', 'KISS1R', 'TMEM150B', 'ZMAT4', 'IL24', 'KIF19', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'DPEP1', 'TTLL9', 'WBP2NL', 'A2ML1', 'NIPAL4', 'PRRT4', 'RHBG', 'GPR135', 'KIAA1210', 'LOC90246', 'CNTNAP3', 'RRAD', 'CD300LB', 'PCDHB18P', 'CBLN1', 'B3GALT5', 'GNMT', 'FIGF', 'OXGR1', 'DPF3', 'IL18RAP', 'MAP7D2', 'SLC5A8', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'LRRC24', 'AIM2', 'RAB39A', 'TRIM7', 'PCDH20', 'GABRB2', 'FOXN1', 'TIFAB', 'PHKG1', 'PON3', 'DNAH11', 'MASP2', 'KLK8', 'WFIKKN1', 'CD19', 'CRB2', 'GPR171', 'FREM2', 'DCST2', 'WNT10A', 'LINC00669', 'C19ORF45', 'CLCA2', 'ANK1', 'SLC26A3', 'KCNB1', 'SEPHS1P1', 'HIST1H2AG', 'LINC01465', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'NEURL3', 'RIC3', 'COLCA1', 'CD1E', 'HNRNPCL3', 'TTC41P', 'ANO2', 'MED12L', 'LOC646999', 'CST2', 'PCDHGC5', 'EYA1', 'NRXN1', 'RAB3B', 'MYEOV', 'FAM182B', 'IL6', 'SEC14L1P1', 'CLPSL1', 'STXBP6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'LPAR4', 'CXCR2', 'KIF4B', 'MSLN', 'CR2', 'FNDC8', 'AJAP1', 'CLDN14', 'PATL2', 'TDRD9', 'ZNF676', 'CLEC4F', 'KCNRG', 'C9ORF117', 'FAM43B', 'HAPLN1', 'ABHD1', 'MAGEL2', 'NDP', 'VIT', 'TRABD2A', 'PDCD1', 'TSPAN32', 'MKX', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.7846443925219112e-15 NRMSE: 7.45853593818645e-16 MAPE: 4.5063172407057366e-12 Pearson Correlation: 0.268250532975855 Spearman Correlation: 0.2562774363476734 Coefficient of Determination: -0.91634596265457 RMSE: 0.5667183527463802 NRMSE: 0.18663538703980903 MAPE: 2521.360947928638 Predictor: ElasticNet Pearson Correlation: 0.8059754442137206 Spearman Correlation: 0.744585494430795 Coefficient of Determination: 0.5910094000562449 RMSE: 0.29118942491487215 NRMSE: 0.07799368552695116 MAPE: 347.08470541085444 Pearson Correlation: 0.406790987019494 Spearman Correlation: 0.372997756316457 Coefficient of Determination: 0.11275423093176151 RMSE: 0.38561355138908865 NRMSE: 0.12699277174019055 MAPE: 3283.1657884932433 Predictor: RandomForests Pearson Correlation: 0.5025080028834915 Spearman Correlation: 0.5278915513582496 Coefficient of Determination: 0.2386702534948556 RMSE: 0.3972878969764269 NRMSE: 0.10641165045571901 MAPE: 363.7120656871787 Pearson Correlation: 0.3479156615047917 Spearman Correlation: 0.3615842356843235 Coefficient of Determination: 0.10667526723508303 RMSE: 0.3869323118471989 NRMSE: 0.12742707454213695 MAPE: 2509.610197345597 Protein: CTNNB1 x_train_column_count: 1002 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'IQUB', 'LINC01119', 'CBLN4', 'NKPD1', 'LINC01341', 'SOX8', 'EYS', 'ECT2L', 'PAX2', 'FXYD1', 'PPP1R3G', 'RNF138P1', 'CCR8', 'CCIN', 'MYCBPAP', 'XPNPEP2', 'ETV2', 'TEKT3', 'STKLD1', 'SLC30A8', 'C19ORF18', 'UGT8', 'SLC28A3', 'JPH4', 'UBE2Q2P1', 'METTL7B', 'SLC25A18', 'HEPACAM2', 'CASQ1', 'PLP1', 'TEX14', 'IDI2.AS1', 'S100A3', 'GLIS1', 'SGK2', 'ZNF843', 'LRIT3', 'CCDC36', 'NR1I3', 'LINC00482', 'ALOXE3', 'CACNG1', 'WNT2B', 'MS4A15', 'PBX4', 'ZIC2', 'ST6GALNAC1', 'GTSE1.AS1', 'ADAMTS8', 'PYGO1', 'LGALS2', 'TMEM92', 'FUT9', 'FCRL6', 'CCDC151', 'C9ORF43', 'PITX2', 'BCHE', 'PNCK', 'TNNI3K', 'AOC2', 'GJB1', 'DQX1', 'CKMT2', 'LPAR3', 'FAM189A1', 'ABCA17P', 'CACNA1G', 'C2ORF50', 'C1ORF101', 'NLRP12', 'ADCYAP1', 'ENPP6', 'SLC6A20', 'IYD', 'ZNF835', 'OTOA', 'CA3', 'SPIB', 'CLDN9', 'FAM95B1', 'FAM90A1', 'RYR2', 'C2CD4A', 'C1ORF95', 'PCDH9', 'LINC01550', 'CLEC3A', 'SVOPL', 'CCDC158', 'SCN2B', 'VSIG1', 'CLECL1', 'PCSK1N', 'IL20RB', 'ARC', 'CCDC65', 'TAS1R3', 'GSDMC', 'TTC16', 'AURKC', 'ZCCHC18', 'ULBP3', 'DDX11L2', 'DUOXA1', 'B3GALT5.AS1', 'ALDH8A1', 'KNDC1', 'COLCA2', 'GSTM1', 'PCYT1B', 'BPIFB2', 'MYOZ1', 'PDE1C', 'CRYGS', 'PPP1R36', 'TARP', 'KLHL4', 'LOC148709', 'LUZP2', 'LOC441455', 'JPH3', 'CPEB1', 'IL22RA1', 'HOXD3', 'FAM57B', 'LOC90768', 'CAMP', 'OR7E91P', 'FLJ37201', 'RIMS1', 'IL12RB2', 'RELN', 'LBX2', 'FUT7', 'SCARA5', 'PLA2G5', 'KCNE1', 'IGSF5', 'TUBB8', 'HIST1H2BN', 'GPR18', 'ZBED3.AS1', 'SLC22A18AS', 'HOXB13', 'CD177', 'ZC3H12D', 'MNX1', 'ASTN1', 'CIDEA', 'TCHH', 'ONECUT2', 'C10ORF128', 'GAL', 'SP5', 'WDR72', 'CHRNA6', 'KCNE2', 'IRX4', 'FAM135B', 'BTBD8', 'SLC16A10', 'RSPH4A', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'MGC16142', 'CCDC7', 'DCSTAMP', 'CELF5', 'GRIN2C', 'MGAT5B', 'GBP1P1', 'CXXC4', 'YPEL4', 'GPR3', 'CXCR5', 'HOXA11', 'SLC30A2', 'OBP2B', 'SLC35F1', 'ATP13A5', 'NIPAL1', 'PYDC1', 'SKIDA1', 'CCDC153', 'RPGRIP1', 'SRL', 'STRC', 'WT1', 'TNFRSF9', 'LRP1B', 'PCSK9', 'PCAT18', 'FOXJ1', 'SLC18A2', 'PPP4R4', 'NOXO1', 'PCK1', 'INSM1', 'CNNM1', 'GPR174', 'MARCO', 'SLC25A53', 'C17ORF104', 'FOXD4', 'DMRT3', 'GPX2', 'INHA', 'COL23A1', 'NOS2', 'ADH1C', 'FOXD1', 'PKNOX2', 'KLHL14', 'BTLA', 'CRISP3', 'LBP', 'IL20', 'TNFRSF17', 'AVPR2', 'GLOD5', 'MYBPC1', 'PARP15', 'CXCL2', 'GPLD1', 'PFN1P2', 'CST9', 'GPR55', 'SLCO4C1', 'SLC23A1', 'STEAP1B', 'C2ORF40', 'BCL2L14', 'DHRS4L1', 'SCN3A', 'AMH', 'ULBP2', 'CXCR2P1', 'VAT1L', 'ZNF98', 'VSIG2', 'RNF212', 'VGLL1', 'HAP1', 'CYSLTR2', 'ZNF454', 'TPSG1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'ORM1', 'ZNF488', 'TMEM105', 'FAM178B', 'P2RX1', 'DKK1', 'DPY19L2P2', 'IL23A', 'SIGLEC17P', 'CRYM', 'PRKG2', 'CXCL1', 'AMBP', 'BRINP1', 'CTCFL', 'SUCNR1', 'DEPDC4', 'FABP7', 'SPDYE1', 'LRRC2', 'GPBAR1', 'XIRP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'FUT6', 'RERGL', 'BDKRB1', 'TENM1', 'LINC00930', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'NUGGC', 'KIAA0319', 'CECR2', 'SORCS1', 'ABHD11.AS1', 'PCDHGA3', 'PKD1L1', 'FAM184B', 'ECEL1', 'CBLN2', 'WSCD2', 'SPESP1', 'SEC14L5', 'SSUH2', 'FSCN2', 'DMRT2', 'FAM162B', 'CCL17', 'ZNF732', 'HOXD4', 'PIANP', 'TMEM217', 'GRIA3', 'CTSG', 'GNB3', 'RSPO1', 'RGS6', 'COL2A1', 'SERPINA6', 'MT1A', 'ADAMTS19', 'IL1R2', 'RNF175', 'CHRNB2', 'ADAM32', 'FLJ12825', 'RASL10A', 'PFKFB1', 'POM121L9P', 'HECTD2.AS1', 'DIRC3', 'PRSS21', 'SMIM5', 'CYP46A1', 'LRRC16B', 'CAPN11', 'IGF2BP3', 'VIPR2', 'TRAT1', 'ZNF804A', 'TBX21', 'HIST1H2BE', 'GPR87', 'LOC100126784', 'CYSRT1', 'PART1', 'FOXC2', 'HOGA1', 'EMX1', 'CA9', 'ZSCAN1', 'HTR7', 'CEP83.AS1', 'SLC13A2', 'XKR9', 'WIPF3', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'OTUD7A', 'CITED1', 'ZBTB16', 'CYP26A1', 'TMEM40', 'TMSB15A', 'PVALB', 'ANKK1', 'WFDC3', 'MAPT.IT1', 'ROPN1L', 'MYO3B', 'GZMM', 'CDHR1', 'FIRRE', 'M1AP', 'MRAP2', 'INE2', 'RFX8', 'TTC23L', 'IGSF22', 'CRTAC1', 'RBM12B.AS1', 'SPAG17', 'MROH7', 'KCNT2', 'PYGM', 'PCDHA12', 'CFAP61', 'BTC', 'HEATR4', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'NWD1', 'CLEC4E', 'LRRC4B', 'SRSF12', 'B3GAT1', 'CCBE1', 'OPCML', 'ADGRF1', 'MIA', 'LINC00173', 'TMEM59L', 'CIDEC', 'HPDL', 'NLRP7', 'RNF182', 'FRMPD1', 'SMC1B', 'KCNA6', 'KLK6', 'ABCC6P2', 'FASLG', 'IL11', 'LOC613037', 'LSAMP', 'GALNT13', 'TSPAN8', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'C15ORF56', 'FAM83A', 'COL28A1', 'PSORS1C1', 'ANO5', 'SLC6A14', 'SLC16A11', 'PTCHD1', 'TMPRSS4', 'C9ORF47', 'ADGRG2', 'SLC24A5', 'TUSC5', 'CYP4F12', 'LOC100133669', 'RUFY4', 'LINC00908', 'KCNQ3', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'VENTX', 'NBPF4', 'MYOM2', 'FAM157A', 'EBF2', 'MAG', 'DSCAML1', 'PTPRN', 'PCDHA5', 'KLK7', 'CCNI2', 'CDKN2B.AS1', 'SYT6', 'DLX2', 'SFTPA2', 'ZBTB20', 'NKX3.2', 'DLX5', 'FAM19A2', 'PLAC1', 'BRE.AS1', 'CNTN2', 'OR2W3', 'SLC6A17', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'TFAP2E', 'CD160', 'ABCD2', 'CD1A', 'GRIA2', 'CCDC144A', 'DEFB1', 'RGS9', 'CACNA1I', 'GGT3P', 'DLK2', 'MYO16', 'PWAR5', 'CDKL2', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CABP4', 'CHRNA10', 'TCEAL2', 'UNC13A', 'FKBP1AP1', 'LY6H', 'AGBL4', 'SLC39A2', 'XCL2', 'TUBAL3', 'S100A7', 'SPAG8', 'PCBP3', 'MPL', 'KCNH3', 'LINC00202.1', 'ARL9', 'TM6SF2', 'ZNF727', 'GRID2IP', 'P2RY12', 'MAK', 'TCN1', 'HRCT1', 'SNORD116.4', 'ELOVL3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'GPM6A', 'CD70', 'SYCE3', 'SYCE2', 'PGLYRP2', 'TIGD4', 'GRIN2A', 'JAKMIP1', 'ARMC3', 'BAIAP2L2', 'RAB9B', 'CTAGE6', 'MKRN3', 'SOSTDC1', 'ASIC3', 'KLF3.AS1', 'LONRF3', 'AGAP7P', 'LRRC43', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'LOC400927', 'ACHE', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'HRC', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'GPR82', 'CHODL', 'CXADRP3', 'TTBK1', 'LOC285593', 'PAH', 'TTYH1', 'HIST1H2BH', 'ADGRL3', 'MLLT4.AS1', 'APOBEC3A', 'CHST9', 'GABRB3', 'SLC25A34', 'MAPK4', 'BRSK2', 'TRH', 'DNASE1L2', 'C8ORF46', 'ST8SIA2', 'CAMK4', 'DGCR5', 'EPYC', 'GBP6', 'GPR63', 'CAPSL', 'MUC15', 'ANKLE1', 'IL17D', 'SLC35F3', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'HAMP', 'MYO15A', 'RMRP', 'FAM201A', 'TNFSF11', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'RHCE', 'DCLK3', 'PTX3', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'RUNDC3A', 'ROPN1B', 'CYP2E1', 'LOC100132215', 'KCNK17', 'FOLR1', 'RRN3P1', 'UCKL1.AS1', 'LINC00961', 'C1QL3', 'PNMA6A', 'CYTL1', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'THSD7B', 'ATP13A4', 'MT1L', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'LIN7A', 'IL1RL1', 'CCR10', 'KISS1R', 'TMEM150B', 'ZMAT4', 'IL24', 'KIF19', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'DPEP1', 'TTLL9', 'WBP2NL', 'A2ML1', 'NIPAL4', 'PRRT4', 'RHBG', 'GPR135', 'KIAA1210', 'LOC90246', 'CNTNAP3', 'RRAD', 'CD300LB', 'PCDHB18P', 'CBLN1', 'B3GALT5', 'GNMT', 'FIGF', 'OXGR1', 'DPF3', 'IL18RAP', 'MAP7D2', 'SLC5A8', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'LRRC24', 'AIM2', 'RAB39A', 'TRIM7', 'PCDH20', 'GABRB2', 'FOXN1', 'TIFAB', 'PHKG1', 'PON3', 'DNAH11', 'MASP2', 'KLK8', 'WFIKKN1', 'CD19', 'CRB2', 'GPR171', 'FREM2', 'DCST2', 'WNT10A', 'LINC00669', 'C19ORF45', 'CLCA2', 'ANK1', 'SLC26A3', 'KCNB1', 'SEPHS1P1', 'HIST1H2AG', 'LINC01465', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'NEURL3', 'RIC3', 'COLCA1', 'CD1E', 'HNRNPCL3', 'TTC41P', 'ANO2', 'MED12L', 'LOC646999', 'CST2', 'PCDHGC5', 'EYA1', 'NRXN1', 'RAB3B', 'MYEOV', 'FAM182B', 'IL6', 'SEC14L1P1', 'CLPSL1', 'STXBP6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'LPAR4', 'CXCR2', 'KIF4B', 'MSLN', 'CR2', 'FNDC8', 'AJAP1', 'CLDN14', 'PATL2', 'TDRD9', 'ZNF676', 'CLEC4F', 'KCNRG', 'C9ORF117', 'FAM43B', 'HAPLN1', 'ABHD1', 'MAGEL2', 'NDP', 'VIT', 'TRABD2A', 'PDCD1', 'TSPAN32', 'MKX', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 4.539061708452038e-15 NRMSE: 8.928130819142481e-16 MAPE: 3.9231494756137446e-12 Pearson Correlation: 0.30137393232137266 Spearman Correlation: 0.33068481123792803 Coefficient of Determination: -0.42875981249679773 RMSE: 0.9162440102006831 NRMSE: 0.2280291705534166 MAPE: 342.28574171359935 Predictor: ElasticNet Pearson Correlation: 0.8908141590036652 Spearman Correlation: 0.8798570123071154 Coefficient of Determination: 0.7324005242261152 RMSE: 0.3750341396334707 NRMSE: 0.07376753336614295 MAPE: 245.79218120188594 Pearson Correlation: 0.34832126585124995 Spearman Correlation: 0.3574821968588431 Coefficient of Determination: 0.013586982751354393 RMSE: 0.7613089455753758 NRMSE: 0.1894698851634792 MAPE: 196.15856627442028 Predictor: RandomForests Pearson Correlation: 0.5062936076418645 Spearman Correlation: 0.5176465537544768 Coefficient of Determination: 0.21124559015693933 RMSE: 0.6438713110679051 NRMSE: 0.12664659934459188 MAPE: 546.855682996532 Pearson Correlation: 0.4205916788894438 Spearman Correlation: 0.41477416837381725 Coefficient of Determination: 0.04981412182600653 RMSE: 0.7471982073386518 NRMSE: 0.18595809147075779 MAPE: 245.82426686938473 Protein: CCNE1 x_train_column_count: 1002 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'IQUB', 'LINC01119', 'CBLN4', 'NKPD1', 'LINC01341', 'SOX8', 'EYS', 'ECT2L', 'PAX2', 'FXYD1', 'PPP1R3G', 'RNF138P1', 'CCR8', 'CCIN', 'MYCBPAP', 'XPNPEP2', 'ETV2', 'TEKT3', 'STKLD1', 'SLC30A8', 'C19ORF18', 'UGT8', 'SLC28A3', 'JPH4', 'UBE2Q2P1', 'METTL7B', 'SLC25A18', 'HEPACAM2', 'CASQ1', 'PLP1', 'TEX14', 'IDI2.AS1', 'S100A3', 'GLIS1', 'SGK2', 'ZNF843', 'LRIT3', 'CCDC36', 'NR1I3', 'LINC00482', 'ALOXE3', 'CACNG1', 'WNT2B', 'MS4A15', 'PBX4', 'ZIC2', 'ST6GALNAC1', 'GTSE1.AS1', 'ADAMTS8', 'PYGO1', 'LGALS2', 'TMEM92', 'FUT9', 'FCRL6', 'CCDC151', 'C9ORF43', 'PITX2', 'BCHE', 'PNCK', 'TNNI3K', 'AOC2', 'GJB1', 'DQX1', 'CKMT2', 'LPAR3', 'FAM189A1', 'ABCA17P', 'CACNA1G', 'C2ORF50', 'C1ORF101', 'NLRP12', 'ADCYAP1', 'ENPP6', 'SLC6A20', 'IYD', 'ZNF835', 'OTOA', 'CA3', 'SPIB', 'CLDN9', 'FAM95B1', 'FAM90A1', 'RYR2', 'C2CD4A', 'C1ORF95', 'PCDH9', 'LINC01550', 'CLEC3A', 'SVOPL', 'CCDC158', 'SCN2B', 'VSIG1', 'CLECL1', 'PCSK1N', 'IL20RB', 'ARC', 'CCDC65', 'TAS1R3', 'GSDMC', 'TTC16', 'AURKC', 'ZCCHC18', 'ULBP3', 'DDX11L2', 'DUOXA1', 'B3GALT5.AS1', 'ALDH8A1', 'KNDC1', 'COLCA2', 'GSTM1', 'PCYT1B', 'BPIFB2', 'MYOZ1', 'PDE1C', 'CRYGS', 'PPP1R36', 'TARP', 'KLHL4', 'LOC148709', 'LUZP2', 'LOC441455', 'JPH3', 'CPEB1', 'IL22RA1', 'HOXD3', 'FAM57B', 'LOC90768', 'CAMP', 'OR7E91P', 'FLJ37201', 'RIMS1', 'IL12RB2', 'RELN', 'LBX2', 'FUT7', 'SCARA5', 'PLA2G5', 'KCNE1', 'IGSF5', 'TUBB8', 'HIST1H2BN', 'GPR18', 'ZBED3.AS1', 'SLC22A18AS', 'HOXB13', 'CD177', 'ZC3H12D', 'MNX1', 'ASTN1', 'CIDEA', 'TCHH', 'ONECUT2', 'C10ORF128', 'GAL', 'SP5', 'WDR72', 'CHRNA6', 'KCNE2', 'IRX4', 'FAM135B', 'BTBD8', 'SLC16A10', 'RSPH4A', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'MGC16142', 'CCDC7', 'DCSTAMP', 'CELF5', 'GRIN2C', 'MGAT5B', 'GBP1P1', 'CXXC4', 'YPEL4', 'GPR3', 'CXCR5', 'HOXA11', 'SLC30A2', 'OBP2B', 'SLC35F1', 'ATP13A5', 'NIPAL1', 'PYDC1', 'SKIDA1', 'CCDC153', 'RPGRIP1', 'SRL', 'STRC', 'WT1', 'TNFRSF9', 'LRP1B', 'PCSK9', 'PCAT18', 'FOXJ1', 'SLC18A2', 'PPP4R4', 'NOXO1', 'PCK1', 'INSM1', 'CNNM1', 'GPR174', 'MARCO', 'SLC25A53', 'C17ORF104', 'FOXD4', 'DMRT3', 'GPX2', 'INHA', 'COL23A1', 'NOS2', 'ADH1C', 'FOXD1', 'PKNOX2', 'KLHL14', 'BTLA', 'CRISP3', 'LBP', 'IL20', 'TNFRSF17', 'AVPR2', 'GLOD5', 'MYBPC1', 'PARP15', 'CXCL2', 'GPLD1', 'PFN1P2', 'CST9', 'GPR55', 'SLCO4C1', 'SLC23A1', 'STEAP1B', 'C2ORF40', 'BCL2L14', 'DHRS4L1', 'SCN3A', 'AMH', 'ULBP2', 'CXCR2P1', 'VAT1L', 'ZNF98', 'VSIG2', 'RNF212', 'VGLL1', 'HAP1', 'CYSLTR2', 'ZNF454', 'TPSG1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'ORM1', 'ZNF488', 'TMEM105', 'FAM178B', 'P2RX1', 'DKK1', 'DPY19L2P2', 'IL23A', 'SIGLEC17P', 'CRYM', 'PRKG2', 'CXCL1', 'AMBP', 'BRINP1', 'CTCFL', 'SUCNR1', 'DEPDC4', 'FABP7', 'SPDYE1', 'LRRC2', 'GPBAR1', 'XIRP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'FUT6', 'RERGL', 'BDKRB1', 'TENM1', 'LINC00930', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'NUGGC', 'KIAA0319', 'CECR2', 'SORCS1', 'ABHD11.AS1', 'PCDHGA3', 'PKD1L1', 'FAM184B', 'ECEL1', 'CBLN2', 'WSCD2', 'SPESP1', 'SEC14L5', 'SSUH2', 'FSCN2', 'DMRT2', 'FAM162B', 'CCL17', 'ZNF732', 'HOXD4', 'PIANP', 'TMEM217', 'GRIA3', 'CTSG', 'GNB3', 'RSPO1', 'RGS6', 'COL2A1', 'SERPINA6', 'MT1A', 'ADAMTS19', 'IL1R2', 'RNF175', 'CHRNB2', 'ADAM32', 'FLJ12825', 'RASL10A', 'PFKFB1', 'POM121L9P', 'HECTD2.AS1', 'DIRC3', 'PRSS21', 'SMIM5', 'CYP46A1', 'LRRC16B', 'CAPN11', 'IGF2BP3', 'VIPR2', 'TRAT1', 'ZNF804A', 'TBX21', 'HIST1H2BE', 'GPR87', 'LOC100126784', 'CYSRT1', 'PART1', 'FOXC2', 'HOGA1', 'EMX1', 'CA9', 'ZSCAN1', 'HTR7', 'CEP83.AS1', 'SLC13A2', 'XKR9', 'WIPF3', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'OTUD7A', 'CITED1', 'ZBTB16', 'CYP26A1', 'TMEM40', 'TMSB15A', 'PVALB', 'ANKK1', 'WFDC3', 'MAPT.IT1', 'ROPN1L', 'MYO3B', 'GZMM', 'CDHR1', 'FIRRE', 'M1AP', 'MRAP2', 'INE2', 'RFX8', 'TTC23L', 'IGSF22', 'CRTAC1', 'RBM12B.AS1', 'SPAG17', 'MROH7', 'KCNT2', 'PYGM', 'PCDHA12', 'CFAP61', 'BTC', 'HEATR4', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'NWD1', 'CLEC4E', 'LRRC4B', 'SRSF12', 'B3GAT1', 'CCBE1', 'OPCML', 'ADGRF1', 'MIA', 'LINC00173', 'TMEM59L', 'CIDEC', 'HPDL', 'NLRP7', 'RNF182', 'FRMPD1', 'SMC1B', 'KCNA6', 'KLK6', 'ABCC6P2', 'FASLG', 'IL11', 'LOC613037', 'LSAMP', 'GALNT13', 'TSPAN8', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'C15ORF56', 'FAM83A', 'COL28A1', 'PSORS1C1', 'ANO5', 'SLC6A14', 'SLC16A11', 'PTCHD1', 'TMPRSS4', 'C9ORF47', 'ADGRG2', 'SLC24A5', 'TUSC5', 'CYP4F12', 'LOC100133669', 'RUFY4', 'LINC00908', 'KCNQ3', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'VENTX', 'NBPF4', 'MYOM2', 'FAM157A', 'EBF2', 'MAG', 'DSCAML1', 'PTPRN', 'PCDHA5', 'KLK7', 'CCNI2', 'CDKN2B.AS1', 'SYT6', 'DLX2', 'SFTPA2', 'ZBTB20', 'NKX3.2', 'DLX5', 'FAM19A2', 'PLAC1', 'BRE.AS1', 'CNTN2', 'OR2W3', 'SLC6A17', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'TFAP2E', 'CD160', 'ABCD2', 'CD1A', 'GRIA2', 'CCDC144A', 'DEFB1', 'RGS9', 'CACNA1I', 'GGT3P', 'DLK2', 'MYO16', 'PWAR5', 'CDKL2', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CABP4', 'CHRNA10', 'TCEAL2', 'UNC13A', 'FKBP1AP1', 'LY6H', 'AGBL4', 'SLC39A2', 'XCL2', 'TUBAL3', 'S100A7', 'SPAG8', 'PCBP3', 'MPL', 'KCNH3', 'LINC00202.1', 'ARL9', 'TM6SF2', 'ZNF727', 'GRID2IP', 'P2RY12', 'MAK', 'TCN1', 'HRCT1', 'SNORD116.4', 'ELOVL3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'GPM6A', 'CD70', 'SYCE3', 'SYCE2', 'PGLYRP2', 'TIGD4', 'GRIN2A', 'JAKMIP1', 'ARMC3', 'BAIAP2L2', 'RAB9B', 'CTAGE6', 'MKRN3', 'SOSTDC1', 'ASIC3', 'KLF3.AS1', 'LONRF3', 'AGAP7P', 'LRRC43', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'LOC400927', 'ACHE', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'HRC', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'GPR82', 'CHODL', 'CXADRP3', 'TTBK1', 'LOC285593', 'PAH', 'TTYH1', 'HIST1H2BH', 'ADGRL3', 'MLLT4.AS1', 'APOBEC3A', 'CHST9', 'GABRB3', 'SLC25A34', 'MAPK4', 'BRSK2', 'TRH', 'DNASE1L2', 'C8ORF46', 'ST8SIA2', 'CAMK4', 'DGCR5', 'EPYC', 'GBP6', 'GPR63', 'CAPSL', 'MUC15', 'ANKLE1', 'IL17D', 'SLC35F3', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'HAMP', 'MYO15A', 'RMRP', 'FAM201A', 'TNFSF11', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'RHCE', 'DCLK3', 'PTX3', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'RUNDC3A', 'ROPN1B', 'CYP2E1', 'LOC100132215', 'KCNK17', 'FOLR1', 'RRN3P1', 'UCKL1.AS1', 'LINC00961', 'C1QL3', 'PNMA6A', 'CYTL1', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'THSD7B', 'ATP13A4', 'MT1L', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'LIN7A', 'IL1RL1', 'CCR10', 'KISS1R', 'TMEM150B', 'ZMAT4', 'IL24', 'KIF19', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'DPEP1', 'TTLL9', 'WBP2NL', 'A2ML1', 'NIPAL4', 'PRRT4', 'RHBG', 'GPR135', 'KIAA1210', 'LOC90246', 'CNTNAP3', 'RRAD', 'CD300LB', 'PCDHB18P', 'CBLN1', 'B3GALT5', 'GNMT', 'FIGF', 'OXGR1', 'DPF3', 'IL18RAP', 'MAP7D2', 'SLC5A8', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'LRRC24', 'AIM2', 'RAB39A', 'TRIM7', 'PCDH20', 'GABRB2', 'FOXN1', 'TIFAB', 'PHKG1', 'PON3', 'DNAH11', 'MASP2', 'KLK8', 'WFIKKN1', 'CD19', 'CRB2', 'GPR171', 'FREM2', 'DCST2', 'WNT10A', 'LINC00669', 'C19ORF45', 'CLCA2', 'ANK1', 'SLC26A3', 'KCNB1', 'SEPHS1P1', 'HIST1H2AG', 'LINC01465', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'NEURL3', 'RIC3', 'COLCA1', 'CD1E', 'HNRNPCL3', 'TTC41P', 'ANO2', 'MED12L', 'LOC646999', 'CST2', 'PCDHGC5', 'EYA1', 'NRXN1', 'RAB3B', 'MYEOV', 'FAM182B', 'IL6', 'SEC14L1P1', 'CLPSL1', 'STXBP6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'LPAR4', 'CXCR2', 'KIF4B', 'MSLN', 'CR2', 'FNDC8', 'AJAP1', 'CLDN14', 'PATL2', 'TDRD9', 'ZNF676', 'CLEC4F', 'KCNRG', 'C9ORF117', 'FAM43B', 'HAPLN1', 'ABHD1', 'MAGEL2', 'NDP', 'VIT', 'TRABD2A', 'PDCD1', 'TSPAN32', 'MKX', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.1369307469495645e-15 NRMSE: 5.157059504668689e-16 MAPE: 4.517367762509767e-13 Pearson Correlation: 0.5315451647661822 Spearman Correlation: 0.3952833869866355 Coefficient of Determination: -0.40319172616709253 RMSE: 0.49547149774846394 NRMSE: 0.26927945138205317 MAPE: 77.15211935206483 Predictor: ElasticNet Pearson Correlation: 0.8689026485745026 Spearman Correlation: 0.7948658324168388 Coefficient of Determination: 0.7274115025918715 RMSE: 0.2677312962778322 NRMSE: 0.06461165052437005 MAPE: 48.335783271064976 Pearson Correlation: 0.6766831182102175 Spearman Correlation: 0.510496536923227 Coefficient of Determination: 0.4194175108255582 RMSE: 0.31870739122288105 NRMSE: 0.1732114800748271 MAPE: 54.6905760812357 Predictor: RandomForests Pearson Correlation: 0.6622014021787835 Spearman Correlation: 0.6168367928231678 Coefficient of Determination: 0.4001765825179331 RMSE: 0.3971523039666706 NRMSE: 0.09584484976389956 MAPE: 78.35399167381958 Pearson Correlation: 0.6910570567434463 Spearman Correlation: 0.527533899131792 Coefficient of Determination: 0.4639448379125274 RMSE: 0.30624211125900097 NRMSE: 0.1664368345800798 MAPE: 55.170629279542936 Protein: CCND1 x_train_column_count: 1002 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'IQUB', 'LINC01119', 'CBLN4', 'NKPD1', 'LINC01341', 'SOX8', 'EYS', 'ECT2L', 'PAX2', 'FXYD1', 'PPP1R3G', 'RNF138P1', 'CCR8', 'CCIN', 'MYCBPAP', 'XPNPEP2', 'ETV2', 'TEKT3', 'STKLD1', 'SLC30A8', 'C19ORF18', 'UGT8', 'SLC28A3', 'JPH4', 'UBE2Q2P1', 'METTL7B', 'SLC25A18', 'HEPACAM2', 'CASQ1', 'PLP1', 'TEX14', 'IDI2.AS1', 'S100A3', 'GLIS1', 'SGK2', 'ZNF843', 'LRIT3', 'CCDC36', 'NR1I3', 'LINC00482', 'ALOXE3', 'CACNG1', 'WNT2B', 'MS4A15', 'PBX4', 'ZIC2', 'ST6GALNAC1', 'GTSE1.AS1', 'ADAMTS8', 'PYGO1', 'LGALS2', 'TMEM92', 'FUT9', 'FCRL6', 'CCDC151', 'C9ORF43', 'PITX2', 'BCHE', 'PNCK', 'TNNI3K', 'AOC2', 'GJB1', 'DQX1', 'CKMT2', 'LPAR3', 'FAM189A1', 'ABCA17P', 'CACNA1G', 'C2ORF50', 'C1ORF101', 'NLRP12', 'ADCYAP1', 'ENPP6', 'SLC6A20', 'IYD', 'ZNF835', 'OTOA', 'CA3', 'SPIB', 'CLDN9', 'FAM95B1', 'FAM90A1', 'RYR2', 'C2CD4A', 'C1ORF95', 'PCDH9', 'LINC01550', 'CLEC3A', 'SVOPL', 'CCDC158', 'SCN2B', 'VSIG1', 'CLECL1', 'PCSK1N', 'IL20RB', 'ARC', 'CCDC65', 'TAS1R3', 'GSDMC', 'TTC16', 'AURKC', 'ZCCHC18', 'ULBP3', 'DDX11L2', 'DUOXA1', 'B3GALT5.AS1', 'ALDH8A1', 'KNDC1', 'COLCA2', 'GSTM1', 'PCYT1B', 'BPIFB2', 'MYOZ1', 'PDE1C', 'CRYGS', 'PPP1R36', 'TARP', 'KLHL4', 'LOC148709', 'LUZP2', 'LOC441455', 'JPH3', 'CPEB1', 'IL22RA1', 'HOXD3', 'FAM57B', 'LOC90768', 'CAMP', 'OR7E91P', 'FLJ37201', 'RIMS1', 'IL12RB2', 'RELN', 'LBX2', 'FUT7', 'SCARA5', 'PLA2G5', 'KCNE1', 'IGSF5', 'TUBB8', 'HIST1H2BN', 'GPR18', 'ZBED3.AS1', 'SLC22A18AS', 'HOXB13', 'CD177', 'ZC3H12D', 'MNX1', 'ASTN1', 'CIDEA', 'TCHH', 'ONECUT2', 'C10ORF128', 'GAL', 'SP5', 'WDR72', 'CHRNA6', 'KCNE2', 'IRX4', 'FAM135B', 'BTBD8', 'SLC16A10', 'RSPH4A', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'MGC16142', 'CCDC7', 'DCSTAMP', 'CELF5', 'GRIN2C', 'MGAT5B', 'GBP1P1', 'CXXC4', 'YPEL4', 'GPR3', 'CXCR5', 'HOXA11', 'SLC30A2', 'OBP2B', 'SLC35F1', 'ATP13A5', 'NIPAL1', 'PYDC1', 'SKIDA1', 'CCDC153', 'RPGRIP1', 'SRL', 'STRC', 'WT1', 'TNFRSF9', 'LRP1B', 'PCSK9', 'PCAT18', 'FOXJ1', 'SLC18A2', 'PPP4R4', 'NOXO1', 'PCK1', 'INSM1', 'CNNM1', 'GPR174', 'MARCO', 'SLC25A53', 'C17ORF104', 'FOXD4', 'DMRT3', 'GPX2', 'INHA', 'COL23A1', 'NOS2', 'ADH1C', 'FOXD1', 'PKNOX2', 'KLHL14', 'BTLA', 'CRISP3', 'LBP', 'IL20', 'TNFRSF17', 'AVPR2', 'GLOD5', 'MYBPC1', 'PARP15', 'CXCL2', 'GPLD1', 'PFN1P2', 'CST9', 'GPR55', 'SLCO4C1', 'SLC23A1', 'STEAP1B', 'C2ORF40', 'BCL2L14', 'DHRS4L1', 'SCN3A', 'AMH', 'ULBP2', 'CXCR2P1', 'VAT1L', 'ZNF98', 'VSIG2', 'RNF212', 'VGLL1', 'HAP1', 'CYSLTR2', 'ZNF454', 'TPSG1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'ORM1', 'ZNF488', 'TMEM105', 'FAM178B', 'P2RX1', 'DKK1', 'DPY19L2P2', 'IL23A', 'SIGLEC17P', 'CRYM', 'PRKG2', 'CXCL1', 'AMBP', 'BRINP1', 'CTCFL', 'SUCNR1', 'DEPDC4', 'FABP7', 'SPDYE1', 'LRRC2', 'GPBAR1', 'XIRP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'FUT6', 'RERGL', 'BDKRB1', 'TENM1', 'LINC00930', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'NUGGC', 'KIAA0319', 'CECR2', 'SORCS1', 'ABHD11.AS1', 'PCDHGA3', 'PKD1L1', 'FAM184B', 'ECEL1', 'CBLN2', 'WSCD2', 'SPESP1', 'SEC14L5', 'SSUH2', 'FSCN2', 'DMRT2', 'FAM162B', 'CCL17', 'ZNF732', 'HOXD4', 'PIANP', 'TMEM217', 'GRIA3', 'CTSG', 'GNB3', 'RSPO1', 'RGS6', 'COL2A1', 'SERPINA6', 'MT1A', 'ADAMTS19', 'IL1R2', 'RNF175', 'CHRNB2', 'ADAM32', 'FLJ12825', 'RASL10A', 'PFKFB1', 'POM121L9P', 'HECTD2.AS1', 'DIRC3', 'PRSS21', 'SMIM5', 'CYP46A1', 'LRRC16B', 'CAPN11', 'IGF2BP3', 'VIPR2', 'TRAT1', 'ZNF804A', 'TBX21', 'HIST1H2BE', 'GPR87', 'LOC100126784', 'CYSRT1', 'PART1', 'FOXC2', 'HOGA1', 'EMX1', 'CA9', 'ZSCAN1', 'HTR7', 'CEP83.AS1', 'SLC13A2', 'XKR9', 'WIPF3', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'OTUD7A', 'CITED1', 'ZBTB16', 'CYP26A1', 'TMEM40', 'TMSB15A', 'PVALB', 'ANKK1', 'WFDC3', 'MAPT.IT1', 'ROPN1L', 'MYO3B', 'GZMM', 'CDHR1', 'FIRRE', 'M1AP', 'MRAP2', 'INE2', 'RFX8', 'TTC23L', 'IGSF22', 'CRTAC1', 'RBM12B.AS1', 'SPAG17', 'MROH7', 'KCNT2', 'PYGM', 'PCDHA12', 'CFAP61', 'BTC', 'HEATR4', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'NWD1', 'CLEC4E', 'LRRC4B', 'SRSF12', 'B3GAT1', 'CCBE1', 'OPCML', 'ADGRF1', 'MIA', 'LINC00173', 'TMEM59L', 'CIDEC', 'HPDL', 'NLRP7', 'RNF182', 'FRMPD1', 'SMC1B', 'KCNA6', 'KLK6', 'ABCC6P2', 'FASLG', 'IL11', 'LOC613037', 'LSAMP', 'GALNT13', 'TSPAN8', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'C15ORF56', 'FAM83A', 'COL28A1', 'PSORS1C1', 'ANO5', 'SLC6A14', 'SLC16A11', 'PTCHD1', 'TMPRSS4', 'C9ORF47', 'ADGRG2', 'SLC24A5', 'TUSC5', 'CYP4F12', 'LOC100133669', 'RUFY4', 'LINC00908', 'KCNQ3', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'VENTX', 'NBPF4', 'MYOM2', 'FAM157A', 'EBF2', 'MAG', 'DSCAML1', 'PTPRN', 'PCDHA5', 'KLK7', 'CCNI2', 'CDKN2B.AS1', 'SYT6', 'DLX2', 'SFTPA2', 'ZBTB20', 'NKX3.2', 'DLX5', 'FAM19A2', 'PLAC1', 'BRE.AS1', 'CNTN2', 'OR2W3', 'SLC6A17', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'TFAP2E', 'CD160', 'ABCD2', 'CD1A', 'GRIA2', 'CCDC144A', 'DEFB1', 'RGS9', 'CACNA1I', 'GGT3P', 'DLK2', 'MYO16', 'PWAR5', 'CDKL2', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CABP4', 'CHRNA10', 'TCEAL2', 'UNC13A', 'FKBP1AP1', 'LY6H', 'AGBL4', 'SLC39A2', 'XCL2', 'TUBAL3', 'S100A7', 'SPAG8', 'PCBP3', 'MPL', 'KCNH3', 'LINC00202.1', 'ARL9', 'TM6SF2', 'ZNF727', 'GRID2IP', 'P2RY12', 'MAK', 'TCN1', 'HRCT1', 'SNORD116.4', 'ELOVL3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'GPM6A', 'CD70', 'SYCE3', 'SYCE2', 'PGLYRP2', 'TIGD4', 'GRIN2A', 'JAKMIP1', 'ARMC3', 'BAIAP2L2', 'RAB9B', 'CTAGE6', 'MKRN3', 'SOSTDC1', 'ASIC3', 'KLF3.AS1', 'LONRF3', 'AGAP7P', 'LRRC43', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'LOC400927', 'ACHE', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'HRC', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'GPR82', 'CHODL', 'CXADRP3', 'TTBK1', 'LOC285593', 'PAH', 'TTYH1', 'HIST1H2BH', 'ADGRL3', 'MLLT4.AS1', 'APOBEC3A', 'CHST9', 'GABRB3', 'SLC25A34', 'MAPK4', 'BRSK2', 'TRH', 'DNASE1L2', 'C8ORF46', 'ST8SIA2', 'CAMK4', 'DGCR5', 'EPYC', 'GBP6', 'GPR63', 'CAPSL', 'MUC15', 'ANKLE1', 'IL17D', 'SLC35F3', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'HAMP', 'MYO15A', 'RMRP', 'FAM201A', 'TNFSF11', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'RHCE', 'DCLK3', 'PTX3', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'RUNDC3A', 'ROPN1B', 'CYP2E1', 'LOC100132215', 'KCNK17', 'FOLR1', 'RRN3P1', 'UCKL1.AS1', 'LINC00961', 'C1QL3', 'PNMA6A', 'CYTL1', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'THSD7B', 'ATP13A4', 'MT1L', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'LIN7A', 'IL1RL1', 'CCR10', 'KISS1R', 'TMEM150B', 'ZMAT4', 'IL24', 'KIF19', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'DPEP1', 'TTLL9', 'WBP2NL', 'A2ML1', 'NIPAL4', 'PRRT4', 'RHBG', 'GPR135', 'KIAA1210', 'LOC90246', 'CNTNAP3', 'RRAD', 'CD300LB', 'PCDHB18P', 'CBLN1', 'B3GALT5', 'GNMT', 'FIGF', 'OXGR1', 'DPF3', 'IL18RAP', 'MAP7D2', 'SLC5A8', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'LRRC24', 'AIM2', 'RAB39A', 'TRIM7', 'PCDH20', 'GABRB2', 'FOXN1', 'TIFAB', 'PHKG1', 'PON3', 'DNAH11', 'MASP2', 'KLK8', 'WFIKKN1', 'CD19', 'CRB2', 'GPR171', 'FREM2', 'DCST2', 'WNT10A', 'LINC00669', 'C19ORF45', 'CLCA2', 'ANK1', 'SLC26A3', 'KCNB1', 'SEPHS1P1', 'HIST1H2AG', 'LINC01465', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'NEURL3', 'RIC3', 'COLCA1', 'CD1E', 'HNRNPCL3', 'TTC41P', 'ANO2', 'MED12L', 'LOC646999', 'CST2', 'PCDHGC5', 'EYA1', 'NRXN1', 'RAB3B', 'MYEOV', 'FAM182B', 'IL6', 'SEC14L1P1', 'CLPSL1', 'STXBP6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'LPAR4', 'CXCR2', 'KIF4B', 'MSLN', 'CR2', 'FNDC8', 'AJAP1', 'CLDN14', 'PATL2', 'TDRD9', 'ZNF676', 'CLEC4F', 'KCNRG', 'C9ORF117', 'FAM43B', 'HAPLN1', 'ABHD1', 'MAGEL2', 'NDP', 'VIT', 'TRABD2A', 'PDCD1', 'TSPAN32', 'MKX', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.4433159056208632e-15 NRMSE: 8.676797835909532e-16 MAPE: 4.623223269956469e-12 Pearson Correlation: 0.12231459541870711 Spearman Correlation: 0.13005072675836504 Coefficient of Determination: -0.8572435353074221 RMSE: 0.32084518774874704 NRMSE: 0.24822459905052535 MAPE: 573.6512291512618 Predictor: ElasticNet Pearson Correlation: 0.6210245672260183 Spearman Correlation: 0.590869778414534 Coefficient of Determination: 0.30354533177833 RMSE: 0.1992410880178142 NRMSE: 0.11977798031634478 MAPE: 562.2582926453649 Pearson Correlation: 0.21783864381480267 Spearman Correlation: 0.23837674373231885 Coefficient of Determination: 0.03617590098196899 RMSE: 0.23113195496636704 NRMSE: 0.17881719608093014 MAPE: 379.6734517681487 Predictor: RandomForests Pearson Correlation: 0.5277942424679339 Spearman Correlation: 0.5142937801522268 Coefficient of Determination: 0.1622647775151801 RMSE: 0.21851732008126495 NRMSE: 0.13136629358866972 MAPE: 591.5616453011494 Pearson Correlation: 0.2516893346210961 Spearman Correlation: 0.274914642473905 Coefficient of Determination: 0.05519645124047334 RMSE: 0.22883995837516488 NRMSE: 0.17704397349071987 MAPE: 403.8771927547404 Protein: ERBB2 x_train_column_count: 1002 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'IQUB', 'LINC01119', 'CBLN4', 'NKPD1', 'LINC01341', 'SOX8', 'EYS', 'ECT2L', 'PAX2', 'FXYD1', 'PPP1R3G', 'RNF138P1', 'CCR8', 'CCIN', 'MYCBPAP', 'XPNPEP2', 'ETV2', 'TEKT3', 'STKLD1', 'SLC30A8', 'C19ORF18', 'UGT8', 'SLC28A3', 'JPH4', 'UBE2Q2P1', 'METTL7B', 'SLC25A18', 'HEPACAM2', 'CASQ1', 'PLP1', 'TEX14', 'IDI2.AS1', 'S100A3', 'GLIS1', 'SGK2', 'ZNF843', 'LRIT3', 'CCDC36', 'NR1I3', 'LINC00482', 'ALOXE3', 'CACNG1', 'WNT2B', 'MS4A15', 'PBX4', 'ZIC2', 'ST6GALNAC1', 'GTSE1.AS1', 'ADAMTS8', 'PYGO1', 'LGALS2', 'TMEM92', 'FUT9', 'FCRL6', 'CCDC151', 'C9ORF43', 'PITX2', 'BCHE', 'PNCK', 'TNNI3K', 'AOC2', 'GJB1', 'DQX1', 'CKMT2', 'LPAR3', 'FAM189A1', 'ABCA17P', 'CACNA1G', 'C2ORF50', 'C1ORF101', 'NLRP12', 'ADCYAP1', 'ENPP6', 'SLC6A20', 'IYD', 'ZNF835', 'OTOA', 'CA3', 'SPIB', 'CLDN9', 'FAM95B1', 'FAM90A1', 'RYR2', 'C2CD4A', 'C1ORF95', 'PCDH9', 'LINC01550', 'CLEC3A', 'SVOPL', 'CCDC158', 'SCN2B', 'VSIG1', 'CLECL1', 'PCSK1N', 'IL20RB', 'ARC', 'CCDC65', 'TAS1R3', 'GSDMC', 'TTC16', 'AURKC', 'ZCCHC18', 'ULBP3', 'DDX11L2', 'DUOXA1', 'B3GALT5.AS1', 'ALDH8A1', 'KNDC1', 'COLCA2', 'GSTM1', 'PCYT1B', 'BPIFB2', 'MYOZ1', 'PDE1C', 'CRYGS', 'PPP1R36', 'TARP', 'KLHL4', 'LOC148709', 'LUZP2', 'LOC441455', 'JPH3', 'CPEB1', 'IL22RA1', 'HOXD3', 'FAM57B', 'LOC90768', 'CAMP', 'OR7E91P', 'FLJ37201', 'RIMS1', 'IL12RB2', 'RELN', 'LBX2', 'FUT7', 'SCARA5', 'PLA2G5', 'KCNE1', 'IGSF5', 'TUBB8', 'HIST1H2BN', 'GPR18', 'ZBED3.AS1', 'SLC22A18AS', 'HOXB13', 'CD177', 'ZC3H12D', 'MNX1', 'ASTN1', 'CIDEA', 'TCHH', 'ONECUT2', 'C10ORF128', 'GAL', 'SP5', 'WDR72', 'CHRNA6', 'KCNE2', 'IRX4', 'FAM135B', 'BTBD8', 'SLC16A10', 'RSPH4A', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'MGC16142', 'CCDC7', 'DCSTAMP', 'CELF5', 'GRIN2C', 'MGAT5B', 'GBP1P1', 'CXXC4', 'YPEL4', 'GPR3', 'CXCR5', 'HOXA11', 'SLC30A2', 'OBP2B', 'SLC35F1', 'ATP13A5', 'NIPAL1', 'PYDC1', 'SKIDA1', 'CCDC153', 'RPGRIP1', 'SRL', 'STRC', 'WT1', 'TNFRSF9', 'LRP1B', 'PCSK9', 'PCAT18', 'FOXJ1', 'SLC18A2', 'PPP4R4', 'NOXO1', 'PCK1', 'INSM1', 'CNNM1', 'GPR174', 'MARCO', 'SLC25A53', 'C17ORF104', 'FOXD4', 'DMRT3', 'GPX2', 'INHA', 'COL23A1', 'NOS2', 'ADH1C', 'FOXD1', 'PKNOX2', 'KLHL14', 'BTLA', 'CRISP3', 'LBP', 'IL20', 'TNFRSF17', 'AVPR2', 'GLOD5', 'MYBPC1', 'PARP15', 'CXCL2', 'GPLD1', 'PFN1P2', 'CST9', 'GPR55', 'SLCO4C1', 'SLC23A1', 'STEAP1B', 'C2ORF40', 'BCL2L14', 'DHRS4L1', 'SCN3A', 'AMH', 'ULBP2', 'CXCR2P1', 'VAT1L', 'ZNF98', 'VSIG2', 'RNF212', 'VGLL1', 'HAP1', 'CYSLTR2', 'ZNF454', 'TPSG1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'ORM1', 'ZNF488', 'TMEM105', 'FAM178B', 'P2RX1', 'DKK1', 'DPY19L2P2', 'IL23A', 'SIGLEC17P', 'CRYM', 'PRKG2', 'CXCL1', 'AMBP', 'BRINP1', 'CTCFL', 'SUCNR1', 'DEPDC4', 'FABP7', 'SPDYE1', 'LRRC2', 'GPBAR1', 'XIRP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'FUT6', 'RERGL', 'BDKRB1', 'TENM1', 'LINC00930', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'NUGGC', 'KIAA0319', 'CECR2', 'SORCS1', 'ABHD11.AS1', 'PCDHGA3', 'PKD1L1', 'FAM184B', 'ECEL1', 'CBLN2', 'WSCD2', 'SPESP1', 'SEC14L5', 'SSUH2', 'FSCN2', 'DMRT2', 'FAM162B', 'CCL17', 'ZNF732', 'HOXD4', 'PIANP', 'TMEM217', 'GRIA3', 'CTSG', 'GNB3', 'RSPO1', 'RGS6', 'COL2A1', 'SERPINA6', 'MT1A', 'ADAMTS19', 'IL1R2', 'RNF175', 'CHRNB2', 'ADAM32', 'FLJ12825', 'RASL10A', 'PFKFB1', 'POM121L9P', 'HECTD2.AS1', 'DIRC3', 'PRSS21', 'SMIM5', 'CYP46A1', 'LRRC16B', 'CAPN11', 'IGF2BP3', 'VIPR2', 'TRAT1', 'ZNF804A', 'TBX21', 'HIST1H2BE', 'GPR87', 'LOC100126784', 'CYSRT1', 'PART1', 'FOXC2', 'HOGA1', 'EMX1', 'CA9', 'ZSCAN1', 'HTR7', 'CEP83.AS1', 'SLC13A2', 'XKR9', 'WIPF3', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'OTUD7A', 'CITED1', 'ZBTB16', 'CYP26A1', 'TMEM40', 'TMSB15A', 'PVALB', 'ANKK1', 'WFDC3', 'MAPT.IT1', 'ROPN1L', 'MYO3B', 'GZMM', 'CDHR1', 'FIRRE', 'M1AP', 'MRAP2', 'INE2', 'RFX8', 'TTC23L', 'IGSF22', 'CRTAC1', 'RBM12B.AS1', 'SPAG17', 'MROH7', 'KCNT2', 'PYGM', 'PCDHA12', 'CFAP61', 'BTC', 'HEATR4', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'NWD1', 'CLEC4E', 'LRRC4B', 'SRSF12', 'B3GAT1', 'CCBE1', 'OPCML', 'ADGRF1', 'MIA', 'LINC00173', 'TMEM59L', 'CIDEC', 'HPDL', 'NLRP7', 'RNF182', 'FRMPD1', 'SMC1B', 'KCNA6', 'KLK6', 'ABCC6P2', 'FASLG', 'IL11', 'LOC613037', 'LSAMP', 'GALNT13', 'TSPAN8', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'C15ORF56', 'FAM83A', 'COL28A1', 'PSORS1C1', 'ANO5', 'SLC6A14', 'SLC16A11', 'PTCHD1', 'TMPRSS4', 'C9ORF47', 'ADGRG2', 'SLC24A5', 'TUSC5', 'CYP4F12', 'LOC100133669', 'RUFY4', 'LINC00908', 'KCNQ3', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'VENTX', 'NBPF4', 'MYOM2', 'FAM157A', 'EBF2', 'MAG', 'DSCAML1', 'PTPRN', 'PCDHA5', 'KLK7', 'CCNI2', 'CDKN2B.AS1', 'SYT6', 'DLX2', 'SFTPA2', 'ZBTB20', 'NKX3.2', 'DLX5', 'FAM19A2', 'PLAC1', 'BRE.AS1', 'CNTN2', 'OR2W3', 'SLC6A17', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'TFAP2E', 'CD160', 'ABCD2', 'CD1A', 'GRIA2', 'CCDC144A', 'DEFB1', 'RGS9', 'CACNA1I', 'GGT3P', 'DLK2', 'MYO16', 'PWAR5', 'CDKL2', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CABP4', 'CHRNA10', 'TCEAL2', 'UNC13A', 'FKBP1AP1', 'LY6H', 'AGBL4', 'SLC39A2', 'XCL2', 'TUBAL3', 'S100A7', 'SPAG8', 'PCBP3', 'MPL', 'KCNH3', 'LINC00202.1', 'ARL9', 'TM6SF2', 'ZNF727', 'GRID2IP', 'P2RY12', 'MAK', 'TCN1', 'HRCT1', 'SNORD116.4', 'ELOVL3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'GPM6A', 'CD70', 'SYCE3', 'SYCE2', 'PGLYRP2', 'TIGD4', 'GRIN2A', 'JAKMIP1', 'ARMC3', 'BAIAP2L2', 'RAB9B', 'CTAGE6', 'MKRN3', 'SOSTDC1', 'ASIC3', 'KLF3.AS1', 'LONRF3', 'AGAP7P', 'LRRC43', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'LOC400927', 'ACHE', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'HRC', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'GPR82', 'CHODL', 'CXADRP3', 'TTBK1', 'LOC285593', 'PAH', 'TTYH1', 'HIST1H2BH', 'ADGRL3', 'MLLT4.AS1', 'APOBEC3A', 'CHST9', 'GABRB3', 'SLC25A34', 'MAPK4', 'BRSK2', 'TRH', 'DNASE1L2', 'C8ORF46', 'ST8SIA2', 'CAMK4', 'DGCR5', 'EPYC', 'GBP6', 'GPR63', 'CAPSL', 'MUC15', 'ANKLE1', 'IL17D', 'SLC35F3', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'HAMP', 'MYO15A', 'RMRP', 'FAM201A', 'TNFSF11', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'RHCE', 'DCLK3', 'PTX3', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'RUNDC3A', 'ROPN1B', 'CYP2E1', 'LOC100132215', 'KCNK17', 'FOLR1', 'RRN3P1', 'UCKL1.AS1', 'LINC00961', 'C1QL3', 'PNMA6A', 'CYTL1', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'THSD7B', 'ATP13A4', 'MT1L', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'LIN7A', 'IL1RL1', 'CCR10', 'KISS1R', 'TMEM150B', 'ZMAT4', 'IL24', 'KIF19', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'DPEP1', 'TTLL9', 'WBP2NL', 'A2ML1', 'NIPAL4', 'PRRT4', 'RHBG', 'GPR135', 'KIAA1210', 'LOC90246', 'CNTNAP3', 'RRAD', 'CD300LB', 'PCDHB18P', 'CBLN1', 'B3GALT5', 'GNMT', 'FIGF', 'OXGR1', 'DPF3', 'IL18RAP', 'MAP7D2', 'SLC5A8', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'LRRC24', 'AIM2', 'RAB39A', 'TRIM7', 'PCDH20', 'GABRB2', 'FOXN1', 'TIFAB', 'PHKG1', 'PON3', 'DNAH11', 'MASP2', 'KLK8', 'WFIKKN1', 'CD19', 'CRB2', 'GPR171', 'FREM2', 'DCST2', 'WNT10A', 'LINC00669', 'C19ORF45', 'CLCA2', 'ANK1', 'SLC26A3', 'KCNB1', 'SEPHS1P1', 'HIST1H2AG', 'LINC01465', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'NEURL3', 'RIC3', 'COLCA1', 'CD1E', 'HNRNPCL3', 'TTC41P', 'ANO2', 'MED12L', 'LOC646999', 'CST2', 'PCDHGC5', 'EYA1', 'NRXN1', 'RAB3B', 'MYEOV', 'FAM182B', 'IL6', 'SEC14L1P1', 'CLPSL1', 'STXBP6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'LPAR4', 'CXCR2', 'KIF4B', 'MSLN', 'CR2', 'FNDC8', 'AJAP1', 'CLDN14', 'PATL2', 'TDRD9', 'ZNF676', 'CLEC4F', 'KCNRG', 'C9ORF117', 'FAM43B', 'HAPLN1', 'ABHD1', 'MAGEL2', 'NDP', 'VIT', 'TRABD2A', 'PDCD1', 'TSPAN32', 'MKX', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 7.313787770510848e-15 NRMSE: 1.3125258457927332e-15 MAPE: 6.721530056674205e-12 Pearson Correlation: 0.49061436456862884 Spearman Correlation: 0.3100965759438104 Coefficient of Determination: -0.0555293417875915 RMSE: 1.0861579033339563 NRMSE: 0.18504487509309783 MAPE: 2045.477560279399 Predictor: ElasticNet Pearson Correlation: 0.9384532111835291 Spearman Correlation: 0.8742117579476222 Coefficient of Determination: 0.8525722933864637 RMSE: 0.37743913426725273 NRMSE: 0.06773489120601058 MAPE: 227.41140256643527 Pearson Correlation: 0.565117804387636 Spearman Correlation: 0.42040776509608824 Coefficient of Determination: 0.29926920771808185 RMSE: 0.8849799113748577 NRMSE: 0.15077089312483732 MAPE: 3667.0050805210903 Predictor: RandomForests Pearson Correlation: 0.6641053507513037 Spearman Correlation: 0.6187817246000614 Coefficient of Determination: 0.29739954335378405 RMSE: 0.8239703542062576 NRMSE: 0.14786898663141926 MAPE: 378.272193504103 Pearson Correlation: 0.5596329420069039 Spearman Correlation: 0.4554189835138036 Coefficient of Determination: 0.21785984539773184 RMSE: 0.9349752245956924 NRMSE: 0.1592884175674553 MAPE: 1745.3394078060203 Protein: ERBB3 x_train_column_count: 1002 x_train columns: ['AMDHD1', 'DES', 'ALDH1L1', 'SOX15', 'POU5F1B', 'PCSK1', 'ALOX15', 'CATSPER3', 'C4ORF36', 'MST1L', 'PPP2R2B', 'CA14', 'NPTX1', 'TAT', 'TMEM200C', 'LEP', 'PCDHGA1', 'ACTA1', 'MPZ', 'ABCA10', 'MUC6', 'C10ORF55', 'FIBCD1', 'TUBA3E', 'GRIK4', 'GLDC', 'CYP4F35P', 'FDCSP', 'ANP32AP1', 'C1ORF228', 'LOC100272216', 'SLITRK5', 'ZSCAN23', 'MOGAT2', 'PTPRH', 'PDZD7', 'CLPSL2', 'SLC1A7', 'SLC26A4', 'PDE6G', 'LRFN2', 'FBLL1', 'IRX6', 'CACNA1F', 'LINC00922', 'CCL13', 'BMX', 'LOC399815', 'MAST1', 'XKRX', 'FOXP2', 'CFAP57', 'PCDHA2', 'KIAA0125', 'GIPR', 'C1ORF186', 'FOXF1', 'ALG1L', 'ASB14', 'LINC01139', 'KCNJ10', 'HHIPL2', 'JAKMIP2', 'ZNF280B', 'CADM2', 'TSSK4', 'NXNL2', 'CERS1', 'TMEM35', 'LRFN5', 'PDZRN4', 'BRINP2', 'HSD17B2', 'C2CD4B', 'DNAJC5B', 'RNASE2', 'ASAH2B', 'C10ORF95', 'DNAI1', 'WNK3', 'MAT1A', 'LGR5', 'PCDHAC1', 'FCGR3B', 'GDF6', 'GPR141', 'TMEM151B', 'LGALS12', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'KRT6A', 'HP', 'CYP11A1', 'TMEM253', 'MIR503HG', 'HIST1H2AM', 'IL1RL2', 'ESYT3', 'PCP4L1', 'AOC1', 'NFE2', 'MYT1', 'TLL2', 'C19ORF26', 'DMC1', 'C1QL1', 'HMGCLL1', 'AQP5', 'KIAA1875', 'SLC24A2', 'ERICH3', 'SLC6A16', 'CD164L2', 'KIF1A', 'DGKI', 'PQLC2L', 'DYDC2', 'PRAME', 'HAND2.AS1', 'UMODL1', 'ATP8A2', 'IGDCC3', 'IQSEC3', 'TGM1', 'EPHA7', 'SPSB4', 'PKD1L2', 'LOC644172', 'UGT2B15', 'NPC1L1', 'CD300LG', 'GP1BA', 'AQP7', 'TEKT2', 'NBPF6', 'C2CD4C', 'MGAM', 'CNTF', 'PLA2G10', 'TMEM232', 'GPR27', 'KERA', 'MCHR1', 'PRSS12', 'PLEKHD1', 'FCRL3', 'LOC100130987', 'PTCHD4', 'CD244', 'SLC25A21', 'SLC6A4', 'DIO3', 'PNMT', 'L1TD1', 'IL10', 'PLCXD3', 'CST4', 'FCRLA', 'RGN', 'LINC00839', 'DCANP1', 'TBC1D3H', 'SPDYA', 'SNAP25', 'LINC00242', 'C6', 'STAP1', 'PCDHGB3', 'GFRA2', 'TPSD1', 'FLG', 'DNASE1L3', 'IGFL2', 'GPR158', 'GJB3', 'C1GALT1C1L', 'SFTPD', 'DLGAP1', 'GDF10', 'PROC', 'FAM186B', 'TM4SF19', 'NR6A1', 'ZBED2', 'BCO2', 'PTH2R', 'ITPKA', 'PNPLA3', 'C1ORF229', 'ALOX12P2', 'SULT4A1', 'BCAN', 'HIST2H2BA', 'FBXL13', 'KCNG1', 'GUSBP5', 'FAM86B2', 'DOC2B', 'SLC17A7', 'PPM1N', 'PRR34', 'SIGLEC15', 'ZNF492', 'PTPRZ1', 'HTR1D', 'NNAT', 'FGF18', 'LRRIQ3', 'LCN12', 'HCN2', 'C10ORF82', 'ATP1A4', 'NAALAD2', 'KCNJ3', 'EGOT', 'ZNF660', 'RNF183', 'SLC7A4', 'GJB5', 'LRRC31', 'SYT8', 'LRRIQ1', 'SLC38A4', 'RAET1E', 'LTA', 'AURKAPS1', 'ADRA1B', 'TNFSF15', 'PCDHA7', 'TRPA1', 'FBXO24', 'SCGB3A1', 'MAL', 'CNGA1', 'LY6G6C', 'C4ORF47', 'RP1', 'GRM8', 'KLK11', 'ACSL6', 'RPL13AP3', 'PTGDR', 'TUBA3D', 'IQUB', 'LINC01119', 'CBLN4', 'NKPD1', 'LINC01341', 'SOX8', 'EYS', 'ECT2L', 'PAX2', 'FXYD1', 'PPP1R3G', 'RNF138P1', 'CCR8', 'CCIN', 'MYCBPAP', 'XPNPEP2', 'ETV2', 'TEKT3', 'STKLD1', 'SLC30A8', 'C19ORF18', 'UGT8', 'SLC28A3', 'JPH4', 'UBE2Q2P1', 'METTL7B', 'SLC25A18', 'HEPACAM2', 'CASQ1', 'PLP1', 'TEX14', 'IDI2.AS1', 'S100A3', 'GLIS1', 'SGK2', 'ZNF843', 'LRIT3', 'CCDC36', 'NR1I3', 'LINC00482', 'ALOXE3', 'CACNG1', 'WNT2B', 'MS4A15', 'PBX4', 'ZIC2', 'ST6GALNAC1', 'GTSE1.AS1', 'ADAMTS8', 'PYGO1', 'LGALS2', 'TMEM92', 'FUT9', 'FCRL6', 'CCDC151', 'C9ORF43', 'PITX2', 'BCHE', 'PNCK', 'TNNI3K', 'AOC2', 'GJB1', 'DQX1', 'CKMT2', 'LPAR3', 'FAM189A1', 'ABCA17P', 'CACNA1G', 'C2ORF50', 'C1ORF101', 'NLRP12', 'ADCYAP1', 'ENPP6', 'SLC6A20', 'IYD', 'ZNF835', 'OTOA', 'CA3', 'SPIB', 'CLDN9', 'FAM95B1', 'FAM90A1', 'RYR2', 'C2CD4A', 'C1ORF95', 'PCDH9', 'LINC01550', 'CLEC3A', 'SVOPL', 'CCDC158', 'SCN2B', 'VSIG1', 'CLECL1', 'PCSK1N', 'IL20RB', 'ARC', 'CCDC65', 'TAS1R3', 'GSDMC', 'TTC16', 'AURKC', 'ZCCHC18', 'ULBP3', 'DDX11L2', 'DUOXA1', 'B3GALT5.AS1', 'ALDH8A1', 'KNDC1', 'COLCA2', 'GSTM1', 'PCYT1B', 'BPIFB2', 'MYOZ1', 'PDE1C', 'CRYGS', 'PPP1R36', 'TARP', 'KLHL4', 'LOC148709', 'LUZP2', 'LOC441455', 'JPH3', 'CPEB1', 'IL22RA1', 'HOXD3', 'FAM57B', 'LOC90768', 'CAMP', 'OR7E91P', 'FLJ37201', 'RIMS1', 'IL12RB2', 'RELN', 'LBX2', 'FUT7', 'SCARA5', 'PLA2G5', 'KCNE1', 'IGSF5', 'TUBB8', 'HIST1H2BN', 'GPR18', 'ZBED3.AS1', 'SLC22A18AS', 'HOXB13', 'CD177', 'ZC3H12D', 'MNX1', 'ASTN1', 'CIDEA', 'TCHH', 'ONECUT2', 'C10ORF128', 'GAL', 'SP5', 'WDR72', 'CHRNA6', 'KCNE2', 'IRX4', 'FAM135B', 'BTBD8', 'SLC16A10', 'RSPH4A', 'SCN7A', 'ALB', 'HOXB8', 'SCART1', 'LINC01124', 'CCDC183', 'MGC16142', 'CCDC7', 'DCSTAMP', 'CELF5', 'GRIN2C', 'MGAT5B', 'GBP1P1', 'CXXC4', 'YPEL4', 'GPR3', 'CXCR5', 'HOXA11', 'SLC30A2', 'OBP2B', 'SLC35F1', 'ATP13A5', 'NIPAL1', 'PYDC1', 'SKIDA1', 'CCDC153', 'RPGRIP1', 'SRL', 'STRC', 'WT1', 'TNFRSF9', 'LRP1B', 'PCSK9', 'PCAT18', 'FOXJ1', 'SLC18A2', 'PPP4R4', 'NOXO1', 'PCK1', 'INSM1', 'CNNM1', 'GPR174', 'MARCO', 'SLC25A53', 'C17ORF104', 'FOXD4', 'DMRT3', 'GPX2', 'INHA', 'COL23A1', 'NOS2', 'ADH1C', 'FOXD1', 'PKNOX2', 'KLHL14', 'BTLA', 'CRISP3', 'LBP', 'IL20', 'TNFRSF17', 'AVPR2', 'GLOD5', 'MYBPC1', 'PARP15', 'CXCL2', 'GPLD1', 'PFN1P2', 'CST9', 'GPR55', 'SLCO4C1', 'SLC23A1', 'STEAP1B', 'C2ORF40', 'BCL2L14', 'DHRS4L1', 'SCN3A', 'AMH', 'ULBP2', 'CXCR2P1', 'VAT1L', 'ZNF98', 'VSIG2', 'RNF212', 'VGLL1', 'HAP1', 'CYSLTR2', 'ZNF454', 'TPSG1', 'FAM218A', 'SYN2', 'EMILIN3', 'DBIL5P', 'ORM1', 'ZNF488', 'TMEM105', 'FAM178B', 'P2RX1', 'DKK1', 'DPY19L2P2', 'IL23A', 'SIGLEC17P', 'CRYM', 'PRKG2', 'CXCL1', 'AMBP', 'BRINP1', 'CTCFL', 'SUCNR1', 'DEPDC4', 'FABP7', 'SPDYE1', 'LRRC2', 'GPBAR1', 'XIRP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'FUT6', 'RERGL', 'BDKRB1', 'TENM1', 'LINC00930', 'BMPER', 'HCG27', 'CLEC12A', 'RDM1', 'CYP4F8', 'CDR1', 'NUGGC', 'KIAA0319', 'CECR2', 'SORCS1', 'ABHD11.AS1', 'PCDHGA3', 'PKD1L1', 'FAM184B', 'ECEL1', 'CBLN2', 'WSCD2', 'SPESP1', 'SEC14L5', 'SSUH2', 'FSCN2', 'DMRT2', 'FAM162B', 'CCL17', 'ZNF732', 'HOXD4', 'PIANP', 'TMEM217', 'GRIA3', 'CTSG', 'GNB3', 'RSPO1', 'RGS6', 'COL2A1', 'SERPINA6', 'MT1A', 'ADAMTS19', 'IL1R2', 'RNF175', 'CHRNB2', 'ADAM32', 'FLJ12825', 'RASL10A', 'PFKFB1', 'POM121L9P', 'HECTD2.AS1', 'DIRC3', 'PRSS21', 'SMIM5', 'CYP46A1', 'LRRC16B', 'CAPN11', 'IGF2BP3', 'VIPR2', 'TRAT1', 'ZNF804A', 'TBX21', 'HIST1H2BE', 'GPR87', 'LOC100126784', 'CYSRT1', 'PART1', 'FOXC2', 'HOGA1', 'EMX1', 'CA9', 'ZSCAN1', 'HTR7', 'CEP83.AS1', 'SLC13A2', 'XKR9', 'WIPF3', 'ULBP1', 'SLC26A10', 'HS3ST3B1', 'OTUD7A', 'CITED1', 'ZBTB16', 'CYP26A1', 'TMEM40', 'TMSB15A', 'PVALB', 'ANKK1', 'WFDC3', 'MAPT.IT1', 'ROPN1L', 'MYO3B', 'GZMM', 'CDHR1', 'FIRRE', 'M1AP', 'MRAP2', 'INE2', 'RFX8', 'TTC23L', 'IGSF22', 'CRTAC1', 'RBM12B.AS1', 'SPAG17', 'MROH7', 'KCNT2', 'PYGM', 'PCDHA12', 'CFAP61', 'BTC', 'HEATR4', 'ADGRB1', 'SLC27A6', 'NPAS1', 'UGT2B11', 'GPR37L1', 'NRTN', 'NWD1', 'CLEC4E', 'LRRC4B', 'SRSF12', 'B3GAT1', 'CCBE1', 'OPCML', 'ADGRF1', 'MIA', 'LINC00173', 'TMEM59L', 'CIDEC', 'HPDL', 'NLRP7', 'RNF182', 'FRMPD1', 'SMC1B', 'KCNA6', 'KLK6', 'ABCC6P2', 'FASLG', 'IL11', 'LOC613037', 'LSAMP', 'GALNT13', 'TSPAN8', 'DHDH', 'GAS2', 'RFPL1S', 'SCN3B', 'C15ORF56', 'FAM83A', 'COL28A1', 'PSORS1C1', 'ANO5', 'SLC6A14', 'SLC16A11', 'PTCHD1', 'TMPRSS4', 'C9ORF47', 'ADGRG2', 'SLC24A5', 'TUSC5', 'CYP4F12', 'LOC100133669', 'RUFY4', 'LINC00908', 'KCNQ3', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'VENTX', 'NBPF4', 'MYOM2', 'FAM157A', 'EBF2', 'MAG', 'DSCAML1', 'PTPRN', 'PCDHA5', 'KLK7', 'CCNI2', 'CDKN2B.AS1', 'SYT6', 'DLX2', 'SFTPA2', 'ZBTB20', 'NKX3.2', 'DLX5', 'FAM19A2', 'PLAC1', 'BRE.AS1', 'CNTN2', 'OR2W3', 'SLC6A17', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'TFAP2E', 'CD160', 'ABCD2', 'CD1A', 'GRIA2', 'CCDC144A', 'DEFB1', 'RGS9', 'CACNA1I', 'GGT3P', 'DLK2', 'MYO16', 'PWAR5', 'CDKL2', 'DCX', 'SLC6A11', 'WDR17', 'MSMB', 'BTBD19', 'CHRFAM7A', 'MMP12', 'CABP4', 'CHRNA10', 'TCEAL2', 'UNC13A', 'FKBP1AP1', 'LY6H', 'AGBL4', 'SLC39A2', 'XCL2', 'TUBAL3', 'S100A7', 'SPAG8', 'PCBP3', 'MPL', 'KCNH3', 'LINC00202.1', 'ARL9', 'TM6SF2', 'ZNF727', 'GRID2IP', 'P2RY12', 'MAK', 'TCN1', 'HRCT1', 'SNORD116.4', 'ELOVL3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'GPM6A', 'CD70', 'SYCE3', 'SYCE2', 'PGLYRP2', 'TIGD4', 'GRIN2A', 'JAKMIP1', 'ARMC3', 'BAIAP2L2', 'RAB9B', 'CTAGE6', 'MKRN3', 'SOSTDC1', 'ASIC3', 'KLF3.AS1', 'LONRF3', 'AGAP7P', 'LRRC43', 'ACY3', 'THPO', 'BEX1', 'PRPH2', 'AKR1E2', 'SCN9A', 'SCN2A', 'KLK10', 'LOC400927', 'ACHE', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'HRC', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'GPR82', 'CHODL', 'CXADRP3', 'TTBK1', 'LOC285593', 'PAH', 'TTYH1', 'HIST1H2BH', 'ADGRL3', 'MLLT4.AS1', 'APOBEC3A', 'CHST9', 'GABRB3', 'SLC25A34', 'MAPK4', 'BRSK2', 'TRH', 'DNASE1L2', 'C8ORF46', 'ST8SIA2', 'CAMK4', 'DGCR5', 'EPYC', 'GBP6', 'GPR63', 'CAPSL', 'MUC15', 'ANKLE1', 'IL17D', 'SLC35F3', 'ROBO2', 'AIM1L', 'ASGR1', 'PCDHA1', 'HAMP', 'MYO15A', 'RMRP', 'FAM201A', 'TNFSF11', 'DUSP9', 'FAM159A', 'NMU', 'CHKB.AS1', 'RHCE', 'DCLK3', 'PTX3', 'NEK5', 'TDRD6', 'LYG1', 'MTUS2', 'RUNDC3A', 'ROPN1B', 'CYP2E1', 'LOC100132215', 'KCNK17', 'FOLR1', 'RRN3P1', 'UCKL1.AS1', 'LINC00961', 'C1QL3', 'PNMA6A', 'CYTL1', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'THSD7B', 'ATP13A4', 'MT1L', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'LIN7A', 'IL1RL1', 'CCR10', 'KISS1R', 'TMEM150B', 'ZMAT4', 'IL24', 'KIF19', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'DPEP1', 'TTLL9', 'WBP2NL', 'A2ML1', 'NIPAL4', 'PRRT4', 'RHBG', 'GPR135', 'KIAA1210', 'LOC90246', 'CNTNAP3', 'RRAD', 'CD300LB', 'PCDHB18P', 'CBLN1', 'B3GALT5', 'GNMT', 'FIGF', 'OXGR1', 'DPF3', 'IL18RAP', 'MAP7D2', 'SLC5A8', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'LRRC24', 'AIM2', 'RAB39A', 'TRIM7', 'PCDH20', 'GABRB2', 'FOXN1', 'TIFAB', 'PHKG1', 'PON3', 'DNAH11', 'MASP2', 'KLK8', 'WFIKKN1', 'CD19', 'CRB2', 'GPR171', 'FREM2', 'DCST2', 'WNT10A', 'LINC00669', 'C19ORF45', 'CLCA2', 'ANK1', 'SLC26A3', 'KCNB1', 'SEPHS1P1', 'HIST1H2AG', 'LINC01465', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'NEURL3', 'RIC3', 'COLCA1', 'CD1E', 'HNRNPCL3', 'TTC41P', 'ANO2', 'MED12L', 'LOC646999', 'CST2', 'PCDHGC5', 'EYA1', 'NRXN1', 'RAB3B', 'MYEOV', 'FAM182B', 'IL6', 'SEC14L1P1', 'CLPSL1', 'STXBP6', 'MAPT.AS1', 'ARHGEF33', 'VSTM2A', 'LPAR4', 'CXCR2', 'KIF4B', 'MSLN', 'CR2', 'FNDC8', 'AJAP1', 'CLDN14', 'PATL2', 'TDRD9', 'ZNF676', 'CLEC4F', 'KCNRG', 'C9ORF117', 'FAM43B', 'HAPLN1', 'ABHD1', 'MAGEL2', 'NDP', 'VIT', 'TRABD2A', 'PDCD1', 'TSPAN32', 'MKX', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999997868954927 Coefficient of Determination: 1.0 RMSE: 2.0671993895508623e-15 NRMSE: 5.578777832638943e-16 MAPE: 1.5903965594557243e-12 Pearson Correlation: 0.15240392116302096 Spearman Correlation: 0.15551653497219786 Coefficient of Determination: -0.4460147885699248 RMSE: 0.6226268607555849 NRMSE: 0.22978637386305123 MAPE: 471.84151320113125 Predictor: ElasticNet Pearson Correlation: 0.823584194059234 Spearman Correlation: 0.8112868528202078 Coefficient of Determination: 0.6058087143737927 RMSE: 0.2794752535062575 NRMSE: 0.07542234952819953 MAPE: 152.48061392546347 Pearson Correlation: 0.28411563620221003 Spearman Correlation: 0.3119305433616233 Coefficient of Determination: 0.059325518073123695 RMSE: 0.502182028716193 NRMSE: 0.1853350612883104 MAPE: 338.67258393305286 Predictor: RandomForests Pearson Correlation: 0.5212212562226275 Spearman Correlation: 0.5402687259745349 Coefficient of Determination: 0.21805241702068157 RMSE: 0.3936213712852318 NRMSE: 0.10622711053799701 MAPE: 197.6225686471181 Pearson Correlation: 0.33281776167515964 Spearman Correlation: 0.35555555555555557 Coefficient of Determination: 0.10205232264980213 RMSE: 0.4906445748046086 NRMSE: 0.18107705402094362 MAPE: 285.4010107330342 Fold: 3 Protein: RB1 x_train_column_count: 1002 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'LINC01119', 'IQUB', 'CBLN4', 'LINC01341', 'ECT2L', 'SOX8', 'PAX2', 'EYS', 'NKPD1', 'ETV2', 'FXYD1', 'RNF138P1', 'MYCBPAP', 'TEKT3', 'XPNPEP2', 'CCR8', 'PPP1R3G', 'CCIN', 'STKLD1', 'C19ORF18', 'SLC30A8', 'UGT8', 'SLC28A3', 'JPH4', 'PLP1', 'UBE2Q2P1', 'SLC25A18', 'METTL7B', 'HEPACAM2', 'TEX14', 'IDI2.AS1', 'CASQ1', 'LINC00482', 'S100A3', 'ALOXE3', 'GLIS1', 'SGK2', 'NR1I3', 'CCDC36', 'PBX4', 'ZNF843', 'LRIT3', 'WNT2B', 'CACNG1', 'MS4A15', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'LPAR3', 'AOC2', 'TNNI3K', 'BCHE', 'GJB1', 'C9ORF43', 'PITX2', 'FCRL6', 'CCDC151', 'PNCK', 'CKMT2', 'FAM189A1', 'DQX1', 'ABCA17P', 'CACNA1G', 'C1ORF101', 'ENPP6', 'NLRP12', 'C2ORF50', 'ADCYAP1', 'CLDN9', 'FAM90A1', 'SLC6A20', 'IYD', 'SPIB', 'FAM95B1', 'CA3', 'OTOA', 'ZNF835', 'PCDH9', 'C2CD4A', 'C1ORF95', 'RYR2', 'LINC01550', 'ZCCHC18', 'CLEC3A', 'VSIG1', 'AURKC', 'ULBP3', 'CLECL1', 'CCDC158', 'CCDC65', 'IL20RB', 'ARC', 'GSDMC', 'TAS1R3', 'DDX11L2', 'SCN2B', 'TTC16', 'PCSK1N', 'SVOPL', 'ALDH8A1', 'BPIFB2', 'CRYGS', 'MYOZ1', 'COLCA2', 'GSTM1', 'PDE1C', 'KNDC1', 'DUOXA1', 'B3GALT5.AS1', 'PCYT1B', 'IL22RA1', 'LOC148709', 'KLHL4', 'PPP1R36', 'HOXD3', 'TARP', 'FAM57B', 'OR7E91P', 'CAMP', 'LOC90768', 'LOC441455', 'JPH3', 'CPEB1', 'LUZP2', 'FLJ37201', 'IL12RB2', 'RELN', 'FUT7', 'LBX2', 'SCARA5', 'RIMS1', 'PLA2G5', 'GPR18', 'MNX1', 'ZBED3.AS1', 'HIST1H2BN', 'SLC22A18AS', 'HOXB13', 'KCNE1', 'CD177', 'TUBB8', 'ZC3H12D', 'IGSF5', 'ASTN1', 'CIDEA', 'TCHH', 'KCNE2', 'ONECUT2', 'IRX4', 'C10ORF128', 'GAL', 'WDR72', 'CHRNA6', 'SP5', 'BTBD8', 'FAM135B', 'SLC16A10', 'SCN7A', 'MGC16142', 'HOXB8', 'SCART1', 'LINC01124', 'RSPH4A', 'CCDC183', 'ALB', 'YPEL4', 'GBP1P1', 'CCDC7', 'DCSTAMP', 'GRIN2C', 'CELF5', 'MGAT5B', 'CXXC4', 'SLC35F1', 'GPR3', 'CXCR5', 'HOXA11', 'PYDC1', 'CCDC153', 'OBP2B', 'SLC30A2', 'ATP13A5', 'NIPAL1', 'SKIDA1', 'SRL', 'FOXJ1', 'PCSK9', 'LRP1B', 'RPGRIP1', 'WT1', 'TNFRSF9', 'PCAT18', 'STRC', 'SLC18A2', 'INSM1', 'NOXO1', 'CNNM1', 'GPR174', 'PCK1', 'MARCO', 'GPX2', 'FOXD4', 'SLC25A53', 'PPP4R4', 'DMRT3', 'C17ORF104', 'IL20', 'LBP', 'CRISP3', 'KLHL14', 'FOXD1', 'NOS2', 'PKNOX2', 'INHA', 'COL23A1', 'TNFRSF17', 'BTLA', 'AVPR2', 'ADH1C', 'GPLD1', 'PARP15', 'CXCL2', 'MYBPC1', 'GLOD5', 'CST9', 'GPR55', 'SLCO4C1', 'PFN1P2', 'BCL2L14', 'STEAP1B', 'C2ORF40', 'SLC23A1', 'ULBP2', 'VSIG2', 'SCN3A', 'AMH', 'VAT1L', 'CXCR2P1', 'ZNF98', 'DHRS4L1', 'CYSLTR2', 'ZNF454', 'RNF212', 'HAP1', 'TPSG1', 'VGLL1', 'FAM178B', 'FAM218A', 'P2RX1', 'ORM1', 'DBIL5P', 'TMEM105', 'DKK1', 'SYN2', 'EMILIN3', 'ZNF488', 'IL23A', 'SIGLEC17P', 'CRYM', 'AMBP', 'DPY19L2P2', 'PRKG2', 'CXCL1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'CTCFL', 'LRRC2', 'FABP7', 'GPBAR1', 'BRINP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'BDKRB1', 'XIRP1', 'TENM1', 'FUT6', 'LINC00930', 'RERGL', 'BMPER', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'RDM1', 'CECR2', 'CLEC12A', 'HCG27', 'ABHD11.AS1', 'FAM184B', 'PKD1L1', 'PCDHGA3', 'SORCS1', 'SEC14L5', 'WSCD2', 'SSUH2', 'CBLN2', 'ECEL1', 'SPESP1', 'FSCN2', 'CCL17', 'DMRT2', 'ZNF732', 'FAM162B', 'GRIA3', 'TMEM217', 'RSPO1', 'GNB3', 'CTSG', 'RGS6', 'HOXD4', 'PIANP', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'RNF175', 'IL1R2', 'ADAMTS19', 'SERPINA6', 'MT1A', 'RASL10A', 'DIRC3', 'PRSS21', 'HECTD2.AS1', 'PFKFB1', 'POM121L9P', 'CYP46A1', 'LRRC16B', 'SMIM5', 'CAPN11', 'FOXC2', 'ZNF804A', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'VIPR2', 'CYSRT1', 'GPR87', 'IGF2BP3', 'XKR9', 'EMX1', 'SLC26A10', 'HOGA1', 'CA9', 'CEP83.AS1', 'HS3ST3B1', 'SLC13A2', 'HTR7', 'WIPF3', 'ULBP1', 'ZSCAN1', 'ZBTB16', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CYP26A1', 'CITED1', 'ROPN1L', 'MAPT.IT1', 'ANKK1', 'WFDC3', 'GZMM', 'M1AP', 'PVALB', 'FIRRE', 'CDHR1', 'MYO3B', 'IGSF22', 'MRAP2', 'SPAG17', 'INE2', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'CRTAC1', 'MROH7', 'PYGM', 'BTC', 'PCDHA12', 'CFAP61', 'KCNT2', 'HEATR4', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'CLEC4E', 'MIA', 'OPCML', 'ADGRF1', 'LRRC4B', 'NWD1', 'SRSF12', 'B3GAT1', 'CCBE1', 'CIDEC', 'HPDL', 'LINC00173', 'TMEM59L', 'IL11', 'LSAMP', 'RNF182', 'TSPAN8', 'GAS2', 'FASLG', 'KCNA6', 'LOC613037', 'KLK6', 'GALNT13', 'ABCC6P2', 'DHDH', 'NLRP7', 'SMC1B', 'FRMPD1', 'SCN3B', 'RFPL1S', 'C15ORF56', 'COL28A1', 'FAM83A', 'SLC16A11', 'PSORS1C1', 'PTCHD1', 'SLC24A5', 'TUSC5', 'C9ORF47', 'ADGRG2', 'ANO5', 'SLC6A14', 'TMPRSS4', 'RUFY4', 'INTS4P2', 'IGSF1', 'KCNQ3', 'PIK3C2G', 'LOC100133669', 'CYP4F12', 'LINC00908', 'NBPF4', 'MYOM2', 'EBF2', 'VENTX', 'FAM157A', 'DSCAML1', 'PCDHA5', 'PTPRN', 'MAG', 'PLAC1', 'DLX5', 'CCNI2', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'CNTN2', 'FAM19A2', 'KLK7', 'ZBTB20', 'NKX3.2', 'SFTPA2', 'BRE.AS1', 'SLC6A17', 'OR2W3', 'PTPRR', 'RYR3', 'GHRLOS', 'ABCC2', 'TFAP2E', 'ABCD2', 'CD160', 'CD1A', 'GRIA2', 'RGS9', 'CCDC144A', 'DEFB1', 'CDKL2', 'DCX', 'DLK2', 'CACNA1I', 'PWAR5', 'GGT3P', 'MYO16', 'SLC6A11', 'WDR17', 'MSMB', 'CHRFAM7A', 'BTBD19', 'MMP12', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'AGBL4', 'SLC39A2', 'LY6H', 'XCL2', 'SPAG8', 'TUBAL3', 'S100A7', 'P2RY12', 'PCBP3', 'SNORD116.4', 'KCNH3', 'LINC00202.1', 'ZNF727', 'ARL9', 'TM6SF2', 'MAK', 'GRID2IP', 'MPL', 'HRCT1', 'TCN1', 'ELOVL3', 'SLC46A2', 'SYCE3', 'CD70', 'TCTEX1D1', 'NOX5', 'GPM6A', 'GRIN2A', 'PGLYRP2', 'TIGD4', 'SYCE2', 'ARMC3', 'JAKMIP1', 'RAB9B', 'MKRN3', 'CTAGE6', 'BAIAP2L2', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'LONRF3', 'AGAP7P', 'ACY3', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'KLK10', 'SCN9A', 'ACHE', 'AKR1E2', 'SCN2A', 'PRPH2', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'HRC', 'GPR82', 'PAH', 'LOC285593', 'CHODL', 'TTBK1', 'CXADRP3', 'MLLT4.AS1', 'TTYH1', 'CHST9', 'ADGRL3', 'APOBEC3A', 'GABRB3', 'SLC25A34', 'HIST1H2BH', 'TRH', 'BRSK2', 'MAPK4', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'DGCR5', 'CAMK4', 'EPYC', 'MUC15', 'GBP6', 'GPR63', 'ANKLE1', 'CAPSL', 'IL17D', 'ROBO2', 'SLC35F3', 'AIM1L', 'ASGR1', 'HAMP', 'TNFSF11', 'RMRP', 'FAM201A', 'PCDHA1', 'MYO15A', 'FAM159A', 'CHKB.AS1', 'DUSP9', 'NMU', 'PTX3', 'DCLK3', 'NEK5', 'RHCE', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'LOC100132215', 'RUNDC3A', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'LINC00961', 'CYP2E1', 'RRN3P1', 'FOLR1', 'PNMA6A', 'ROPN1B', 'SIGLEC6', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'ADRA2B', 'THSD7B', 'SLC2A14', 'ATP13A4', 'MT1L', 'DPEP1', 'KISS1R', 'KIF19', 'TMEM150B', 'IL1RL1', 'ZMAT4', 'CCR10', 'IL24', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'LIN7A', 'TTLL9', 'WBP2NL', 'RHBG', 'A2ML1', 'PRRT4', 'KIAA1210', 'NIPAL4', 'GPR135', 'LOC90246', 'GNMT', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'FIGF', 'OXGR1', 'CBLN1', 'B3GALT5', 'PCDHB18P', 'RRAD', 'MAP7D2', 'DPF3', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'SLC5A8', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PON3', 'PCDH20', 'GABRB2', 'MASP2', 'TIFAB', 'PHKG1', 'DNAH11', 'KLK8', 'FOXN1', 'WFIKKN1', 'CD19', 'CLCA2', 'DCST2', 'ANK1', 'LINC00669', 'WNT10A', 'GPR171', 'FREM2', 'KCNB1', 'CRB2', 'C19ORF45', 'SLC26A3', 'UCA1', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'RASAL1', 'LINC00685', 'TYMSOS', 'RIC3', 'ANO2', 'CD1E', 'TTC41P', 'COLCA1', 'NEURL3', 'LOC646999', 'CST2', 'MED12L', 'HNRNPCL3', 'PCDHGC5', 'NRXN1', 'RAB3B', 'STXBP6', 'FAM182B', 'MYEOV', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'EYA1', 'ARHGEF33', 'CLPSL1', 'CR2', 'KIF4B', 'FNDC8', 'CXCR2', 'PATL2', 'AJAP1', 'ZNF676', 'VSTM2A', 'CLDN14', 'KCNRG', 'TDRD9', 'CLEC4F', 'LPAR4', 'MSLN', 'C9ORF117', 'MAGEL2', 'FAM43B', 'HAPLN1', 'NDP', 'VIT', 'PDCD1', 'DMRTC1B', 'TRABD2A', 'ABHD1', 'MKX', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.0870211853964525e-15 NRMSE: 3.9753554176289223e-16 MAPE: 4.696898368197408e-12 Pearson Correlation: -0.08523953590358274 Spearman Correlation: -0.11010860484544698 Coefficient of Determination: -1.784998203796583 RMSE: 0.36992162897428305 NRMSE: 0.25956862411712744 MAPE: 1173.4966617423688 Predictor: ElasticNet Pearson Correlation: 0.6184668734060362 Spearman Correlation: 0.5680803767091843 Coefficient of Determination: 0.2854023743019124 RMSE: 0.2033725679238467 NRMSE: 0.07437557340690708 MAPE: 290.7946894488107 Pearson Correlation: 0.1832406023615983 Spearman Correlation: 0.16505193331587678 Coefficient of Determination: 0.008978490203901401 RMSE: 0.22066771886668904 NRMSE: 0.15483932727078675 MAPE: 239.70841235510812 Predictor: RandomForests Pearson Correlation: 0.5047153272631077 Spearman Correlation: 0.5025086704476244 Coefficient of Determination: 0.15234293713441505 RMSE: 0.22149895438754316 NRMSE: 0.08100459127689554 MAPE: 235.78927943016845 Pearson Correlation: 0.22079770368625778 Spearman Correlation: 0.16275764036958068 Coefficient of Determination: 0.02621145151929627 RMSE: 0.2187406995401978 NRMSE: 0.1534871658505114 MAPE: 226.33215784686215 Protein: CDH1 x_train_column_count: 1002 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'LINC01119', 'IQUB', 'CBLN4', 'LINC01341', 'ECT2L', 'SOX8', 'PAX2', 'EYS', 'NKPD1', 'ETV2', 'FXYD1', 'RNF138P1', 'MYCBPAP', 'TEKT3', 'XPNPEP2', 'CCR8', 'PPP1R3G', 'CCIN', 'STKLD1', 'C19ORF18', 'SLC30A8', 'UGT8', 'SLC28A3', 'JPH4', 'PLP1', 'UBE2Q2P1', 'SLC25A18', 'METTL7B', 'HEPACAM2', 'TEX14', 'IDI2.AS1', 'CASQ1', 'LINC00482', 'S100A3', 'ALOXE3', 'GLIS1', 'SGK2', 'NR1I3', 'CCDC36', 'PBX4', 'ZNF843', 'LRIT3', 'WNT2B', 'CACNG1', 'MS4A15', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'LPAR3', 'AOC2', 'TNNI3K', 'BCHE', 'GJB1', 'C9ORF43', 'PITX2', 'FCRL6', 'CCDC151', 'PNCK', 'CKMT2', 'FAM189A1', 'DQX1', 'ABCA17P', 'CACNA1G', 'C1ORF101', 'ENPP6', 'NLRP12', 'C2ORF50', 'ADCYAP1', 'CLDN9', 'FAM90A1', 'SLC6A20', 'IYD', 'SPIB', 'FAM95B1', 'CA3', 'OTOA', 'ZNF835', 'PCDH9', 'C2CD4A', 'C1ORF95', 'RYR2', 'LINC01550', 'ZCCHC18', 'CLEC3A', 'VSIG1', 'AURKC', 'ULBP3', 'CLECL1', 'CCDC158', 'CCDC65', 'IL20RB', 'ARC', 'GSDMC', 'TAS1R3', 'DDX11L2', 'SCN2B', 'TTC16', 'PCSK1N', 'SVOPL', 'ALDH8A1', 'BPIFB2', 'CRYGS', 'MYOZ1', 'COLCA2', 'GSTM1', 'PDE1C', 'KNDC1', 'DUOXA1', 'B3GALT5.AS1', 'PCYT1B', 'IL22RA1', 'LOC148709', 'KLHL4', 'PPP1R36', 'HOXD3', 'TARP', 'FAM57B', 'OR7E91P', 'CAMP', 'LOC90768', 'LOC441455', 'JPH3', 'CPEB1', 'LUZP2', 'FLJ37201', 'IL12RB2', 'RELN', 'FUT7', 'LBX2', 'SCARA5', 'RIMS1', 'PLA2G5', 'GPR18', 'MNX1', 'ZBED3.AS1', 'HIST1H2BN', 'SLC22A18AS', 'HOXB13', 'KCNE1', 'CD177', 'TUBB8', 'ZC3H12D', 'IGSF5', 'ASTN1', 'CIDEA', 'TCHH', 'KCNE2', 'ONECUT2', 'IRX4', 'C10ORF128', 'GAL', 'WDR72', 'CHRNA6', 'SP5', 'BTBD8', 'FAM135B', 'SLC16A10', 'SCN7A', 'MGC16142', 'HOXB8', 'SCART1', 'LINC01124', 'RSPH4A', 'CCDC183', 'ALB', 'YPEL4', 'GBP1P1', 'CCDC7', 'DCSTAMP', 'GRIN2C', 'CELF5', 'MGAT5B', 'CXXC4', 'SLC35F1', 'GPR3', 'CXCR5', 'HOXA11', 'PYDC1', 'CCDC153', 'OBP2B', 'SLC30A2', 'ATP13A5', 'NIPAL1', 'SKIDA1', 'SRL', 'FOXJ1', 'PCSK9', 'LRP1B', 'RPGRIP1', 'WT1', 'TNFRSF9', 'PCAT18', 'STRC', 'SLC18A2', 'INSM1', 'NOXO1', 'CNNM1', 'GPR174', 'PCK1', 'MARCO', 'GPX2', 'FOXD4', 'SLC25A53', 'PPP4R4', 'DMRT3', 'C17ORF104', 'IL20', 'LBP', 'CRISP3', 'KLHL14', 'FOXD1', 'NOS2', 'PKNOX2', 'INHA', 'COL23A1', 'TNFRSF17', 'BTLA', 'AVPR2', 'ADH1C', 'GPLD1', 'PARP15', 'CXCL2', 'MYBPC1', 'GLOD5', 'CST9', 'GPR55', 'SLCO4C1', 'PFN1P2', 'BCL2L14', 'STEAP1B', 'C2ORF40', 'SLC23A1', 'ULBP2', 'VSIG2', 'SCN3A', 'AMH', 'VAT1L', 'CXCR2P1', 'ZNF98', 'DHRS4L1', 'CYSLTR2', 'ZNF454', 'RNF212', 'HAP1', 'TPSG1', 'VGLL1', 'FAM178B', 'FAM218A', 'P2RX1', 'ORM1', 'DBIL5P', 'TMEM105', 'DKK1', 'SYN2', 'EMILIN3', 'ZNF488', 'IL23A', 'SIGLEC17P', 'CRYM', 'AMBP', 'DPY19L2P2', 'PRKG2', 'CXCL1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'CTCFL', 'LRRC2', 'FABP7', 'GPBAR1', 'BRINP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'BDKRB1', 'XIRP1', 'TENM1', 'FUT6', 'LINC00930', 'RERGL', 'BMPER', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'RDM1', 'CECR2', 'CLEC12A', 'HCG27', 'ABHD11.AS1', 'FAM184B', 'PKD1L1', 'PCDHGA3', 'SORCS1', 'SEC14L5', 'WSCD2', 'SSUH2', 'CBLN2', 'ECEL1', 'SPESP1', 'FSCN2', 'CCL17', 'DMRT2', 'ZNF732', 'FAM162B', 'GRIA3', 'TMEM217', 'RSPO1', 'GNB3', 'CTSG', 'RGS6', 'HOXD4', 'PIANP', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'RNF175', 'IL1R2', 'ADAMTS19', 'SERPINA6', 'MT1A', 'RASL10A', 'DIRC3', 'PRSS21', 'HECTD2.AS1', 'PFKFB1', 'POM121L9P', 'CYP46A1', 'LRRC16B', 'SMIM5', 'CAPN11', 'FOXC2', 'ZNF804A', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'VIPR2', 'CYSRT1', 'GPR87', 'IGF2BP3', 'XKR9', 'EMX1', 'SLC26A10', 'HOGA1', 'CA9', 'CEP83.AS1', 'HS3ST3B1', 'SLC13A2', 'HTR7', 'WIPF3', 'ULBP1', 'ZSCAN1', 'ZBTB16', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CYP26A1', 'CITED1', 'ROPN1L', 'MAPT.IT1', 'ANKK1', 'WFDC3', 'GZMM', 'M1AP', 'PVALB', 'FIRRE', 'CDHR1', 'MYO3B', 'IGSF22', 'MRAP2', 'SPAG17', 'INE2', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'CRTAC1', 'MROH7', 'PYGM', 'BTC', 'PCDHA12', 'CFAP61', 'KCNT2', 'HEATR4', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'CLEC4E', 'MIA', 'OPCML', 'ADGRF1', 'LRRC4B', 'NWD1', 'SRSF12', 'B3GAT1', 'CCBE1', 'CIDEC', 'HPDL', 'LINC00173', 'TMEM59L', 'IL11', 'LSAMP', 'RNF182', 'TSPAN8', 'GAS2', 'FASLG', 'KCNA6', 'LOC613037', 'KLK6', 'GALNT13', 'ABCC6P2', 'DHDH', 'NLRP7', 'SMC1B', 'FRMPD1', 'SCN3B', 'RFPL1S', 'C15ORF56', 'COL28A1', 'FAM83A', 'SLC16A11', 'PSORS1C1', 'PTCHD1', 'SLC24A5', 'TUSC5', 'C9ORF47', 'ADGRG2', 'ANO5', 'SLC6A14', 'TMPRSS4', 'RUFY4', 'INTS4P2', 'IGSF1', 'KCNQ3', 'PIK3C2G', 'LOC100133669', 'CYP4F12', 'LINC00908', 'NBPF4', 'MYOM2', 'EBF2', 'VENTX', 'FAM157A', 'DSCAML1', 'PCDHA5', 'PTPRN', 'MAG', 'PLAC1', 'DLX5', 'CCNI2', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'CNTN2', 'FAM19A2', 'KLK7', 'ZBTB20', 'NKX3.2', 'SFTPA2', 'BRE.AS1', 'SLC6A17', 'OR2W3', 'PTPRR', 'RYR3', 'GHRLOS', 'ABCC2', 'TFAP2E', 'ABCD2', 'CD160', 'CD1A', 'GRIA2', 'RGS9', 'CCDC144A', 'DEFB1', 'CDKL2', 'DCX', 'DLK2', 'CACNA1I', 'PWAR5', 'GGT3P', 'MYO16', 'SLC6A11', 'WDR17', 'MSMB', 'CHRFAM7A', 'BTBD19', 'MMP12', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'AGBL4', 'SLC39A2', 'LY6H', 'XCL2', 'SPAG8', 'TUBAL3', 'S100A7', 'P2RY12', 'PCBP3', 'SNORD116.4', 'KCNH3', 'LINC00202.1', 'ZNF727', 'ARL9', 'TM6SF2', 'MAK', 'GRID2IP', 'MPL', 'HRCT1', 'TCN1', 'ELOVL3', 'SLC46A2', 'SYCE3', 'CD70', 'TCTEX1D1', 'NOX5', 'GPM6A', 'GRIN2A', 'PGLYRP2', 'TIGD4', 'SYCE2', 'ARMC3', 'JAKMIP1', 'RAB9B', 'MKRN3', 'CTAGE6', 'BAIAP2L2', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'LONRF3', 'AGAP7P', 'ACY3', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'KLK10', 'SCN9A', 'ACHE', 'AKR1E2', 'SCN2A', 'PRPH2', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'HRC', 'GPR82', 'PAH', 'LOC285593', 'CHODL', 'TTBK1', 'CXADRP3', 'MLLT4.AS1', 'TTYH1', 'CHST9', 'ADGRL3', 'APOBEC3A', 'GABRB3', 'SLC25A34', 'HIST1H2BH', 'TRH', 'BRSK2', 'MAPK4', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'DGCR5', 'CAMK4', 'EPYC', 'MUC15', 'GBP6', 'GPR63', 'ANKLE1', 'CAPSL', 'IL17D', 'ROBO2', 'SLC35F3', 'AIM1L', 'ASGR1', 'HAMP', 'TNFSF11', 'RMRP', 'FAM201A', 'PCDHA1', 'MYO15A', 'FAM159A', 'CHKB.AS1', 'DUSP9', 'NMU', 'PTX3', 'DCLK3', 'NEK5', 'RHCE', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'LOC100132215', 'RUNDC3A', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'LINC00961', 'CYP2E1', 'RRN3P1', 'FOLR1', 'PNMA6A', 'ROPN1B', 'SIGLEC6', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'ADRA2B', 'THSD7B', 'SLC2A14', 'ATP13A4', 'MT1L', 'DPEP1', 'KISS1R', 'KIF19', 'TMEM150B', 'IL1RL1', 'ZMAT4', 'CCR10', 'IL24', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'LIN7A', 'TTLL9', 'WBP2NL', 'RHBG', 'A2ML1', 'PRRT4', 'KIAA1210', 'NIPAL4', 'GPR135', 'LOC90246', 'GNMT', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'FIGF', 'OXGR1', 'CBLN1', 'B3GALT5', 'PCDHB18P', 'RRAD', 'MAP7D2', 'DPF3', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'SLC5A8', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PON3', 'PCDH20', 'GABRB2', 'MASP2', 'TIFAB', 'PHKG1', 'DNAH11', 'KLK8', 'FOXN1', 'WFIKKN1', 'CD19', 'CLCA2', 'DCST2', 'ANK1', 'LINC00669', 'WNT10A', 'GPR171', 'FREM2', 'KCNB1', 'CRB2', 'C19ORF45', 'SLC26A3', 'UCA1', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'RASAL1', 'LINC00685', 'TYMSOS', 'RIC3', 'ANO2', 'CD1E', 'TTC41P', 'COLCA1', 'NEURL3', 'LOC646999', 'CST2', 'MED12L', 'HNRNPCL3', 'PCDHGC5', 'NRXN1', 'RAB3B', 'STXBP6', 'FAM182B', 'MYEOV', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'EYA1', 'ARHGEF33', 'CLPSL1', 'CR2', 'KIF4B', 'FNDC8', 'CXCR2', 'PATL2', 'AJAP1', 'ZNF676', 'VSTM2A', 'CLDN14', 'KCNRG', 'TDRD9', 'CLEC4F', 'LPAR4', 'MSLN', 'C9ORF117', 'MAGEL2', 'FAM43B', 'HAPLN1', 'NDP', 'VIT', 'PDCD1', 'DMRTC1B', 'TRABD2A', 'ABHD1', 'MKX', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.555942561171578e-14 NRMSE: 2.4775366408260528e-15 MAPE: 1.5184992874227427e-11 Pearson Correlation: 0.31951462154348925 Spearman Correlation: 0.24073367498347864 Coefficient of Determination: -0.8457793174051178 RMSE: 1.279171001791987 NRMSE: 0.25147859115951465 MAPE: 591.2722742574298 Predictor: ElasticNet Pearson Correlation: 0.9392215112200479 Spearman Correlation: 0.9032215022092104 Coefficient of Determination: 0.8505023881578739 RMSE: 0.45420008049324323 NRMSE: 0.072322550315793 MAPE: 271.50619851337956 Pearson Correlation: 0.3025477258595526 Spearman Correlation: 0.2810833052781207 Coefficient of Determination: -0.26789002707622966 RMSE: 1.0601797650218332 NRMSE: 0.20842601443436348 MAPE: 356.74115070712986 Predictor: RandomForests Pearson Correlation: 0.656454795448212 Spearman Correlation: 0.6327287990515316 Coefficient of Determination: 0.4226576246938649 RMSE: 0.8925792709162783 NRMSE: 0.1421259308487434 MAPE: 364.18091598090433 Pearson Correlation: 0.6242164386735846 Spearman Correlation: 0.383222855757323 Coefficient of Determination: 0.3636691493169044 RMSE: 0.7510696408185675 NRMSE: 0.1476565172843486 MAPE: 170.3956292724129 Protein: CDH2 x_train_column_count: 1002 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'LINC01119', 'IQUB', 'CBLN4', 'LINC01341', 'ECT2L', 'SOX8', 'PAX2', 'EYS', 'NKPD1', 'ETV2', 'FXYD1', 'RNF138P1', 'MYCBPAP', 'TEKT3', 'XPNPEP2', 'CCR8', 'PPP1R3G', 'CCIN', 'STKLD1', 'C19ORF18', 'SLC30A8', 'UGT8', 'SLC28A3', 'JPH4', 'PLP1', 'UBE2Q2P1', 'SLC25A18', 'METTL7B', 'HEPACAM2', 'TEX14', 'IDI2.AS1', 'CASQ1', 'LINC00482', 'S100A3', 'ALOXE3', 'GLIS1', 'SGK2', 'NR1I3', 'CCDC36', 'PBX4', 'ZNF843', 'LRIT3', 'WNT2B', 'CACNG1', 'MS4A15', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'LPAR3', 'AOC2', 'TNNI3K', 'BCHE', 'GJB1', 'C9ORF43', 'PITX2', 'FCRL6', 'CCDC151', 'PNCK', 'CKMT2', 'FAM189A1', 'DQX1', 'ABCA17P', 'CACNA1G', 'C1ORF101', 'ENPP6', 'NLRP12', 'C2ORF50', 'ADCYAP1', 'CLDN9', 'FAM90A1', 'SLC6A20', 'IYD', 'SPIB', 'FAM95B1', 'CA3', 'OTOA', 'ZNF835', 'PCDH9', 'C2CD4A', 'C1ORF95', 'RYR2', 'LINC01550', 'ZCCHC18', 'CLEC3A', 'VSIG1', 'AURKC', 'ULBP3', 'CLECL1', 'CCDC158', 'CCDC65', 'IL20RB', 'ARC', 'GSDMC', 'TAS1R3', 'DDX11L2', 'SCN2B', 'TTC16', 'PCSK1N', 'SVOPL', 'ALDH8A1', 'BPIFB2', 'CRYGS', 'MYOZ1', 'COLCA2', 'GSTM1', 'PDE1C', 'KNDC1', 'DUOXA1', 'B3GALT5.AS1', 'PCYT1B', 'IL22RA1', 'LOC148709', 'KLHL4', 'PPP1R36', 'HOXD3', 'TARP', 'FAM57B', 'OR7E91P', 'CAMP', 'LOC90768', 'LOC441455', 'JPH3', 'CPEB1', 'LUZP2', 'FLJ37201', 'IL12RB2', 'RELN', 'FUT7', 'LBX2', 'SCARA5', 'RIMS1', 'PLA2G5', 'GPR18', 'MNX1', 'ZBED3.AS1', 'HIST1H2BN', 'SLC22A18AS', 'HOXB13', 'KCNE1', 'CD177', 'TUBB8', 'ZC3H12D', 'IGSF5', 'ASTN1', 'CIDEA', 'TCHH', 'KCNE2', 'ONECUT2', 'IRX4', 'C10ORF128', 'GAL', 'WDR72', 'CHRNA6', 'SP5', 'BTBD8', 'FAM135B', 'SLC16A10', 'SCN7A', 'MGC16142', 'HOXB8', 'SCART1', 'LINC01124', 'RSPH4A', 'CCDC183', 'ALB', 'YPEL4', 'GBP1P1', 'CCDC7', 'DCSTAMP', 'GRIN2C', 'CELF5', 'MGAT5B', 'CXXC4', 'SLC35F1', 'GPR3', 'CXCR5', 'HOXA11', 'PYDC1', 'CCDC153', 'OBP2B', 'SLC30A2', 'ATP13A5', 'NIPAL1', 'SKIDA1', 'SRL', 'FOXJ1', 'PCSK9', 'LRP1B', 'RPGRIP1', 'WT1', 'TNFRSF9', 'PCAT18', 'STRC', 'SLC18A2', 'INSM1', 'NOXO1', 'CNNM1', 'GPR174', 'PCK1', 'MARCO', 'GPX2', 'FOXD4', 'SLC25A53', 'PPP4R4', 'DMRT3', 'C17ORF104', 'IL20', 'LBP', 'CRISP3', 'KLHL14', 'FOXD1', 'NOS2', 'PKNOX2', 'INHA', 'COL23A1', 'TNFRSF17', 'BTLA', 'AVPR2', 'ADH1C', 'GPLD1', 'PARP15', 'CXCL2', 'MYBPC1', 'GLOD5', 'CST9', 'GPR55', 'SLCO4C1', 'PFN1P2', 'BCL2L14', 'STEAP1B', 'C2ORF40', 'SLC23A1', 'ULBP2', 'VSIG2', 'SCN3A', 'AMH', 'VAT1L', 'CXCR2P1', 'ZNF98', 'DHRS4L1', 'CYSLTR2', 'ZNF454', 'RNF212', 'HAP1', 'TPSG1', 'VGLL1', 'FAM178B', 'FAM218A', 'P2RX1', 'ORM1', 'DBIL5P', 'TMEM105', 'DKK1', 'SYN2', 'EMILIN3', 'ZNF488', 'IL23A', 'SIGLEC17P', 'CRYM', 'AMBP', 'DPY19L2P2', 'PRKG2', 'CXCL1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'CTCFL', 'LRRC2', 'FABP7', 'GPBAR1', 'BRINP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'BDKRB1', 'XIRP1', 'TENM1', 'FUT6', 'LINC00930', 'RERGL', 'BMPER', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'RDM1', 'CECR2', 'CLEC12A', 'HCG27', 'ABHD11.AS1', 'FAM184B', 'PKD1L1', 'PCDHGA3', 'SORCS1', 'SEC14L5', 'WSCD2', 'SSUH2', 'CBLN2', 'ECEL1', 'SPESP1', 'FSCN2', 'CCL17', 'DMRT2', 'ZNF732', 'FAM162B', 'GRIA3', 'TMEM217', 'RSPO1', 'GNB3', 'CTSG', 'RGS6', 'HOXD4', 'PIANP', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'RNF175', 'IL1R2', 'ADAMTS19', 'SERPINA6', 'MT1A', 'RASL10A', 'DIRC3', 'PRSS21', 'HECTD2.AS1', 'PFKFB1', 'POM121L9P', 'CYP46A1', 'LRRC16B', 'SMIM5', 'CAPN11', 'FOXC2', 'ZNF804A', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'VIPR2', 'CYSRT1', 'GPR87', 'IGF2BP3', 'XKR9', 'EMX1', 'SLC26A10', 'HOGA1', 'CA9', 'CEP83.AS1', 'HS3ST3B1', 'SLC13A2', 'HTR7', 'WIPF3', 'ULBP1', 'ZSCAN1', 'ZBTB16', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CYP26A1', 'CITED1', 'ROPN1L', 'MAPT.IT1', 'ANKK1', 'WFDC3', 'GZMM', 'M1AP', 'PVALB', 'FIRRE', 'CDHR1', 'MYO3B', 'IGSF22', 'MRAP2', 'SPAG17', 'INE2', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'CRTAC1', 'MROH7', 'PYGM', 'BTC', 'PCDHA12', 'CFAP61', 'KCNT2', 'HEATR4', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'CLEC4E', 'MIA', 'OPCML', 'ADGRF1', 'LRRC4B', 'NWD1', 'SRSF12', 'B3GAT1', 'CCBE1', 'CIDEC', 'HPDL', 'LINC00173', 'TMEM59L', 'IL11', 'LSAMP', 'RNF182', 'TSPAN8', 'GAS2', 'FASLG', 'KCNA6', 'LOC613037', 'KLK6', 'GALNT13', 'ABCC6P2', 'DHDH', 'NLRP7', 'SMC1B', 'FRMPD1', 'SCN3B', 'RFPL1S', 'C15ORF56', 'COL28A1', 'FAM83A', 'SLC16A11', 'PSORS1C1', 'PTCHD1', 'SLC24A5', 'TUSC5', 'C9ORF47', 'ADGRG2', 'ANO5', 'SLC6A14', 'TMPRSS4', 'RUFY4', 'INTS4P2', 'IGSF1', 'KCNQ3', 'PIK3C2G', 'LOC100133669', 'CYP4F12', 'LINC00908', 'NBPF4', 'MYOM2', 'EBF2', 'VENTX', 'FAM157A', 'DSCAML1', 'PCDHA5', 'PTPRN', 'MAG', 'PLAC1', 'DLX5', 'CCNI2', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'CNTN2', 'FAM19A2', 'KLK7', 'ZBTB20', 'NKX3.2', 'SFTPA2', 'BRE.AS1', 'SLC6A17', 'OR2W3', 'PTPRR', 'RYR3', 'GHRLOS', 'ABCC2', 'TFAP2E', 'ABCD2', 'CD160', 'CD1A', 'GRIA2', 'RGS9', 'CCDC144A', 'DEFB1', 'CDKL2', 'DCX', 'DLK2', 'CACNA1I', 'PWAR5', 'GGT3P', 'MYO16', 'SLC6A11', 'WDR17', 'MSMB', 'CHRFAM7A', 'BTBD19', 'MMP12', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'AGBL4', 'SLC39A2', 'LY6H', 'XCL2', 'SPAG8', 'TUBAL3', 'S100A7', 'P2RY12', 'PCBP3', 'SNORD116.4', 'KCNH3', 'LINC00202.1', 'ZNF727', 'ARL9', 'TM6SF2', 'MAK', 'GRID2IP', 'MPL', 'HRCT1', 'TCN1', 'ELOVL3', 'SLC46A2', 'SYCE3', 'CD70', 'TCTEX1D1', 'NOX5', 'GPM6A', 'GRIN2A', 'PGLYRP2', 'TIGD4', 'SYCE2', 'ARMC3', 'JAKMIP1', 'RAB9B', 'MKRN3', 'CTAGE6', 'BAIAP2L2', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'LONRF3', 'AGAP7P', 'ACY3', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'KLK10', 'SCN9A', 'ACHE', 'AKR1E2', 'SCN2A', 'PRPH2', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'HRC', 'GPR82', 'PAH', 'LOC285593', 'CHODL', 'TTBK1', 'CXADRP3', 'MLLT4.AS1', 'TTYH1', 'CHST9', 'ADGRL3', 'APOBEC3A', 'GABRB3', 'SLC25A34', 'HIST1H2BH', 'TRH', 'BRSK2', 'MAPK4', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'DGCR5', 'CAMK4', 'EPYC', 'MUC15', 'GBP6', 'GPR63', 'ANKLE1', 'CAPSL', 'IL17D', 'ROBO2', 'SLC35F3', 'AIM1L', 'ASGR1', 'HAMP', 'TNFSF11', 'RMRP', 'FAM201A', 'PCDHA1', 'MYO15A', 'FAM159A', 'CHKB.AS1', 'DUSP9', 'NMU', 'PTX3', 'DCLK3', 'NEK5', 'RHCE', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'LOC100132215', 'RUNDC3A', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'LINC00961', 'CYP2E1', 'RRN3P1', 'FOLR1', 'PNMA6A', 'ROPN1B', 'SIGLEC6', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'ADRA2B', 'THSD7B', 'SLC2A14', 'ATP13A4', 'MT1L', 'DPEP1', 'KISS1R', 'KIF19', 'TMEM150B', 'IL1RL1', 'ZMAT4', 'CCR10', 'IL24', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'LIN7A', 'TTLL9', 'WBP2NL', 'RHBG', 'A2ML1', 'PRRT4', 'KIAA1210', 'NIPAL4', 'GPR135', 'LOC90246', 'GNMT', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'FIGF', 'OXGR1', 'CBLN1', 'B3GALT5', 'PCDHB18P', 'RRAD', 'MAP7D2', 'DPF3', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'SLC5A8', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PON3', 'PCDH20', 'GABRB2', 'MASP2', 'TIFAB', 'PHKG1', 'DNAH11', 'KLK8', 'FOXN1', 'WFIKKN1', 'CD19', 'CLCA2', 'DCST2', 'ANK1', 'LINC00669', 'WNT10A', 'GPR171', 'FREM2', 'KCNB1', 'CRB2', 'C19ORF45', 'SLC26A3', 'UCA1', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'RASAL1', 'LINC00685', 'TYMSOS', 'RIC3', 'ANO2', 'CD1E', 'TTC41P', 'COLCA1', 'NEURL3', 'LOC646999', 'CST2', 'MED12L', 'HNRNPCL3', 'PCDHGC5', 'NRXN1', 'RAB3B', 'STXBP6', 'FAM182B', 'MYEOV', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'EYA1', 'ARHGEF33', 'CLPSL1', 'CR2', 'KIF4B', 'FNDC8', 'CXCR2', 'PATL2', 'AJAP1', 'ZNF676', 'VSTM2A', 'CLDN14', 'KCNRG', 'TDRD9', 'CLEC4F', 'LPAR4', 'MSLN', 'C9ORF117', 'MAGEL2', 'FAM43B', 'HAPLN1', 'NDP', 'VIT', 'PDCD1', 'DMRTC1B', 'TRABD2A', 'ABHD1', 'MKX', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.0072172704796954e-15 NRMSE: 1.0896504349879324e-15 MAPE: 5.5835859344762454e-11 Pearson Correlation: -0.08857577226069357 Spearman Correlation: -0.10674696691978702 Coefficient of Determination: -1.78818435988038 RMSE: 0.5543328567069978 NRMSE: 0.29208003493740275 MAPE: 9374.183799441578 Predictor: ElasticNet Pearson Correlation: 0.7743353814277998 Spearman Correlation: 0.7590590870062904 Coefficient of Determination: 0.4925243613721856 RMSE: 0.2715837270649204 NRMSE: 0.09840703205483022 MAPE: 1368.7247062899662 Pearson Correlation: -0.03657324735767459 Spearman Correlation: -0.025788351475704192 Coefficient of Determination: -0.306287378150204 RMSE: 0.3794278832553782 NRMSE: 0.19992195673877075 MAPE: 3896.9280880654433 Predictor: RandomForests Pearson Correlation: 0.46681712825554184 Spearman Correlation: 0.4929047799077334 Coefficient of Determination: 0.1513858464738388 RMSE: 0.35119739030380875 NRMSE: 0.12725465262113514 MAPE: 601.9738129823007 Pearson Correlation: 0.0838624257457165 Spearman Correlation: 0.06679634409406603 Coefficient of Determination: -0.012553629441454106 RMSE: 0.3340557065729177 NRMSE: 0.17601518882801745 MAPE: 2807.146506474489 Protein: CDH3 x_train_column_count: 1002 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'LINC01119', 'IQUB', 'CBLN4', 'LINC01341', 'ECT2L', 'SOX8', 'PAX2', 'EYS', 'NKPD1', 'ETV2', 'FXYD1', 'RNF138P1', 'MYCBPAP', 'TEKT3', 'XPNPEP2', 'CCR8', 'PPP1R3G', 'CCIN', 'STKLD1', 'C19ORF18', 'SLC30A8', 'UGT8', 'SLC28A3', 'JPH4', 'PLP1', 'UBE2Q2P1', 'SLC25A18', 'METTL7B', 'HEPACAM2', 'TEX14', 'IDI2.AS1', 'CASQ1', 'LINC00482', 'S100A3', 'ALOXE3', 'GLIS1', 'SGK2', 'NR1I3', 'CCDC36', 'PBX4', 'ZNF843', 'LRIT3', 'WNT2B', 'CACNG1', 'MS4A15', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'LPAR3', 'AOC2', 'TNNI3K', 'BCHE', 'GJB1', 'C9ORF43', 'PITX2', 'FCRL6', 'CCDC151', 'PNCK', 'CKMT2', 'FAM189A1', 'DQX1', 'ABCA17P', 'CACNA1G', 'C1ORF101', 'ENPP6', 'NLRP12', 'C2ORF50', 'ADCYAP1', 'CLDN9', 'FAM90A1', 'SLC6A20', 'IYD', 'SPIB', 'FAM95B1', 'CA3', 'OTOA', 'ZNF835', 'PCDH9', 'C2CD4A', 'C1ORF95', 'RYR2', 'LINC01550', 'ZCCHC18', 'CLEC3A', 'VSIG1', 'AURKC', 'ULBP3', 'CLECL1', 'CCDC158', 'CCDC65', 'IL20RB', 'ARC', 'GSDMC', 'TAS1R3', 'DDX11L2', 'SCN2B', 'TTC16', 'PCSK1N', 'SVOPL', 'ALDH8A1', 'BPIFB2', 'CRYGS', 'MYOZ1', 'COLCA2', 'GSTM1', 'PDE1C', 'KNDC1', 'DUOXA1', 'B3GALT5.AS1', 'PCYT1B', 'IL22RA1', 'LOC148709', 'KLHL4', 'PPP1R36', 'HOXD3', 'TARP', 'FAM57B', 'OR7E91P', 'CAMP', 'LOC90768', 'LOC441455', 'JPH3', 'CPEB1', 'LUZP2', 'FLJ37201', 'IL12RB2', 'RELN', 'FUT7', 'LBX2', 'SCARA5', 'RIMS1', 'PLA2G5', 'GPR18', 'MNX1', 'ZBED3.AS1', 'HIST1H2BN', 'SLC22A18AS', 'HOXB13', 'KCNE1', 'CD177', 'TUBB8', 'ZC3H12D', 'IGSF5', 'ASTN1', 'CIDEA', 'TCHH', 'KCNE2', 'ONECUT2', 'IRX4', 'C10ORF128', 'GAL', 'WDR72', 'CHRNA6', 'SP5', 'BTBD8', 'FAM135B', 'SLC16A10', 'SCN7A', 'MGC16142', 'HOXB8', 'SCART1', 'LINC01124', 'RSPH4A', 'CCDC183', 'ALB', 'YPEL4', 'GBP1P1', 'CCDC7', 'DCSTAMP', 'GRIN2C', 'CELF5', 'MGAT5B', 'CXXC4', 'SLC35F1', 'GPR3', 'CXCR5', 'HOXA11', 'PYDC1', 'CCDC153', 'OBP2B', 'SLC30A2', 'ATP13A5', 'NIPAL1', 'SKIDA1', 'SRL', 'FOXJ1', 'PCSK9', 'LRP1B', 'RPGRIP1', 'WT1', 'TNFRSF9', 'PCAT18', 'STRC', 'SLC18A2', 'INSM1', 'NOXO1', 'CNNM1', 'GPR174', 'PCK1', 'MARCO', 'GPX2', 'FOXD4', 'SLC25A53', 'PPP4R4', 'DMRT3', 'C17ORF104', 'IL20', 'LBP', 'CRISP3', 'KLHL14', 'FOXD1', 'NOS2', 'PKNOX2', 'INHA', 'COL23A1', 'TNFRSF17', 'BTLA', 'AVPR2', 'ADH1C', 'GPLD1', 'PARP15', 'CXCL2', 'MYBPC1', 'GLOD5', 'CST9', 'GPR55', 'SLCO4C1', 'PFN1P2', 'BCL2L14', 'STEAP1B', 'C2ORF40', 'SLC23A1', 'ULBP2', 'VSIG2', 'SCN3A', 'AMH', 'VAT1L', 'CXCR2P1', 'ZNF98', 'DHRS4L1', 'CYSLTR2', 'ZNF454', 'RNF212', 'HAP1', 'TPSG1', 'VGLL1', 'FAM178B', 'FAM218A', 'P2RX1', 'ORM1', 'DBIL5P', 'TMEM105', 'DKK1', 'SYN2', 'EMILIN3', 'ZNF488', 'IL23A', 'SIGLEC17P', 'CRYM', 'AMBP', 'DPY19L2P2', 'PRKG2', 'CXCL1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'CTCFL', 'LRRC2', 'FABP7', 'GPBAR1', 'BRINP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'BDKRB1', 'XIRP1', 'TENM1', 'FUT6', 'LINC00930', 'RERGL', 'BMPER', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'RDM1', 'CECR2', 'CLEC12A', 'HCG27', 'ABHD11.AS1', 'FAM184B', 'PKD1L1', 'PCDHGA3', 'SORCS1', 'SEC14L5', 'WSCD2', 'SSUH2', 'CBLN2', 'ECEL1', 'SPESP1', 'FSCN2', 'CCL17', 'DMRT2', 'ZNF732', 'FAM162B', 'GRIA3', 'TMEM217', 'RSPO1', 'GNB3', 'CTSG', 'RGS6', 'HOXD4', 'PIANP', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'RNF175', 'IL1R2', 'ADAMTS19', 'SERPINA6', 'MT1A', 'RASL10A', 'DIRC3', 'PRSS21', 'HECTD2.AS1', 'PFKFB1', 'POM121L9P', 'CYP46A1', 'LRRC16B', 'SMIM5', 'CAPN11', 'FOXC2', 'ZNF804A', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'VIPR2', 'CYSRT1', 'GPR87', 'IGF2BP3', 'XKR9', 'EMX1', 'SLC26A10', 'HOGA1', 'CA9', 'CEP83.AS1', 'HS3ST3B1', 'SLC13A2', 'HTR7', 'WIPF3', 'ULBP1', 'ZSCAN1', 'ZBTB16', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CYP26A1', 'CITED1', 'ROPN1L', 'MAPT.IT1', 'ANKK1', 'WFDC3', 'GZMM', 'M1AP', 'PVALB', 'FIRRE', 'CDHR1', 'MYO3B', 'IGSF22', 'MRAP2', 'SPAG17', 'INE2', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'CRTAC1', 'MROH7', 'PYGM', 'BTC', 'PCDHA12', 'CFAP61', 'KCNT2', 'HEATR4', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'CLEC4E', 'MIA', 'OPCML', 'ADGRF1', 'LRRC4B', 'NWD1', 'SRSF12', 'B3GAT1', 'CCBE1', 'CIDEC', 'HPDL', 'LINC00173', 'TMEM59L', 'IL11', 'LSAMP', 'RNF182', 'TSPAN8', 'GAS2', 'FASLG', 'KCNA6', 'LOC613037', 'KLK6', 'GALNT13', 'ABCC6P2', 'DHDH', 'NLRP7', 'SMC1B', 'FRMPD1', 'SCN3B', 'RFPL1S', 'C15ORF56', 'COL28A1', 'FAM83A', 'SLC16A11', 'PSORS1C1', 'PTCHD1', 'SLC24A5', 'TUSC5', 'C9ORF47', 'ADGRG2', 'ANO5', 'SLC6A14', 'TMPRSS4', 'RUFY4', 'INTS4P2', 'IGSF1', 'KCNQ3', 'PIK3C2G', 'LOC100133669', 'CYP4F12', 'LINC00908', 'NBPF4', 'MYOM2', 'EBF2', 'VENTX', 'FAM157A', 'DSCAML1', 'PCDHA5', 'PTPRN', 'MAG', 'PLAC1', 'DLX5', 'CCNI2', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'CNTN2', 'FAM19A2', 'KLK7', 'ZBTB20', 'NKX3.2', 'SFTPA2', 'BRE.AS1', 'SLC6A17', 'OR2W3', 'PTPRR', 'RYR3', 'GHRLOS', 'ABCC2', 'TFAP2E', 'ABCD2', 'CD160', 'CD1A', 'GRIA2', 'RGS9', 'CCDC144A', 'DEFB1', 'CDKL2', 'DCX', 'DLK2', 'CACNA1I', 'PWAR5', 'GGT3P', 'MYO16', 'SLC6A11', 'WDR17', 'MSMB', 'CHRFAM7A', 'BTBD19', 'MMP12', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'AGBL4', 'SLC39A2', 'LY6H', 'XCL2', 'SPAG8', 'TUBAL3', 'S100A7', 'P2RY12', 'PCBP3', 'SNORD116.4', 'KCNH3', 'LINC00202.1', 'ZNF727', 'ARL9', 'TM6SF2', 'MAK', 'GRID2IP', 'MPL', 'HRCT1', 'TCN1', 'ELOVL3', 'SLC46A2', 'SYCE3', 'CD70', 'TCTEX1D1', 'NOX5', 'GPM6A', 'GRIN2A', 'PGLYRP2', 'TIGD4', 'SYCE2', 'ARMC3', 'JAKMIP1', 'RAB9B', 'MKRN3', 'CTAGE6', 'BAIAP2L2', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'LONRF3', 'AGAP7P', 'ACY3', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'KLK10', 'SCN9A', 'ACHE', 'AKR1E2', 'SCN2A', 'PRPH2', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'HRC', 'GPR82', 'PAH', 'LOC285593', 'CHODL', 'TTBK1', 'CXADRP3', 'MLLT4.AS1', 'TTYH1', 'CHST9', 'ADGRL3', 'APOBEC3A', 'GABRB3', 'SLC25A34', 'HIST1H2BH', 'TRH', 'BRSK2', 'MAPK4', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'DGCR5', 'CAMK4', 'EPYC', 'MUC15', 'GBP6', 'GPR63', 'ANKLE1', 'CAPSL', 'IL17D', 'ROBO2', 'SLC35F3', 'AIM1L', 'ASGR1', 'HAMP', 'TNFSF11', 'RMRP', 'FAM201A', 'PCDHA1', 'MYO15A', 'FAM159A', 'CHKB.AS1', 'DUSP9', 'NMU', 'PTX3', 'DCLK3', 'NEK5', 'RHCE', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'LOC100132215', 'RUNDC3A', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'LINC00961', 'CYP2E1', 'RRN3P1', 'FOLR1', 'PNMA6A', 'ROPN1B', 'SIGLEC6', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'ADRA2B', 'THSD7B', 'SLC2A14', 'ATP13A4', 'MT1L', 'DPEP1', 'KISS1R', 'KIF19', 'TMEM150B', 'IL1RL1', 'ZMAT4', 'CCR10', 'IL24', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'LIN7A', 'TTLL9', 'WBP2NL', 'RHBG', 'A2ML1', 'PRRT4', 'KIAA1210', 'NIPAL4', 'GPR135', 'LOC90246', 'GNMT', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'FIGF', 'OXGR1', 'CBLN1', 'B3GALT5', 'PCDHB18P', 'RRAD', 'MAP7D2', 'DPF3', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'SLC5A8', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PON3', 'PCDH20', 'GABRB2', 'MASP2', 'TIFAB', 'PHKG1', 'DNAH11', 'KLK8', 'FOXN1', 'WFIKKN1', 'CD19', 'CLCA2', 'DCST2', 'ANK1', 'LINC00669', 'WNT10A', 'GPR171', 'FREM2', 'KCNB1', 'CRB2', 'C19ORF45', 'SLC26A3', 'UCA1', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'RASAL1', 'LINC00685', 'TYMSOS', 'RIC3', 'ANO2', 'CD1E', 'TTC41P', 'COLCA1', 'NEURL3', 'LOC646999', 'CST2', 'MED12L', 'HNRNPCL3', 'PCDHGC5', 'NRXN1', 'RAB3B', 'STXBP6', 'FAM182B', 'MYEOV', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'EYA1', 'ARHGEF33', 'CLPSL1', 'CR2', 'KIF4B', 'FNDC8', 'CXCR2', 'PATL2', 'AJAP1', 'ZNF676', 'VSTM2A', 'CLDN14', 'KCNRG', 'TDRD9', 'CLEC4F', 'LPAR4', 'MSLN', 'C9ORF117', 'MAGEL2', 'FAM43B', 'HAPLN1', 'NDP', 'VIT', 'PDCD1', 'DMRTC1B', 'TRABD2A', 'ABHD1', 'MKX', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 9.199756156192773e-16 NRMSE: 6.454338662648575e-16 MAPE: 2.776724210259073e-12 Pearson Correlation: 0.12444663829375789 Spearman Correlation: 0.12605394082220478 Coefficient of Determination: -1.4235212844167568 RMSE: 0.29318310381019647 NRMSE: 0.2550150076197487 MAPE: 520.1249467317571 Predictor: ElasticNet Pearson Correlation: 0.6312515651888583 Spearman Correlation: 0.6525965067606392 Coefficient of Determination: 0.3623004714653315 RMSE: 0.16970274077827519 NRMSE: 0.1190595644456665 MAPE: 447.3870682183305 Pearson Correlation: 0.28205674480437404 Spearman Correlation: 0.2784448683898802 Coefficient of Determination: 0.05229479018034944 RMSE: 0.1833378580501215 NRMSE: 0.15946998534372603 MAPE: 249.15478510147128 Predictor: RandomForests Pearson Correlation: 0.5576733948421304 Spearman Correlation: 0.5879528488553074 Coefficient of Determination: 0.2646576714275529 RMSE: 0.18223239858356471 NRMSE: 0.1278500860018274 MAPE: 318.04859557718544 Pearson Correlation: 0.2836209631233816 Spearman Correlation: 0.3063654160276313 Coefficient of Determination: 0.07703988880099388 RMSE: 0.18092850101032426 NRMSE: 0.1573742908924511 MAPE: 181.82101938419538 Protein: PTEN x_train_column_count: 1002 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'LINC01119', 'IQUB', 'CBLN4', 'LINC01341', 'ECT2L', 'SOX8', 'PAX2', 'EYS', 'NKPD1', 'ETV2', 'FXYD1', 'RNF138P1', 'MYCBPAP', 'TEKT3', 'XPNPEP2', 'CCR8', 'PPP1R3G', 'CCIN', 'STKLD1', 'C19ORF18', 'SLC30A8', 'UGT8', 'SLC28A3', 'JPH4', 'PLP1', 'UBE2Q2P1', 'SLC25A18', 'METTL7B', 'HEPACAM2', 'TEX14', 'IDI2.AS1', 'CASQ1', 'LINC00482', 'S100A3', 'ALOXE3', 'GLIS1', 'SGK2', 'NR1I3', 'CCDC36', 'PBX4', 'ZNF843', 'LRIT3', 'WNT2B', 'CACNG1', 'MS4A15', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'LPAR3', 'AOC2', 'TNNI3K', 'BCHE', 'GJB1', 'C9ORF43', 'PITX2', 'FCRL6', 'CCDC151', 'PNCK', 'CKMT2', 'FAM189A1', 'DQX1', 'ABCA17P', 'CACNA1G', 'C1ORF101', 'ENPP6', 'NLRP12', 'C2ORF50', 'ADCYAP1', 'CLDN9', 'FAM90A1', 'SLC6A20', 'IYD', 'SPIB', 'FAM95B1', 'CA3', 'OTOA', 'ZNF835', 'PCDH9', 'C2CD4A', 'C1ORF95', 'RYR2', 'LINC01550', 'ZCCHC18', 'CLEC3A', 'VSIG1', 'AURKC', 'ULBP3', 'CLECL1', 'CCDC158', 'CCDC65', 'IL20RB', 'ARC', 'GSDMC', 'TAS1R3', 'DDX11L2', 'SCN2B', 'TTC16', 'PCSK1N', 'SVOPL', 'ALDH8A1', 'BPIFB2', 'CRYGS', 'MYOZ1', 'COLCA2', 'GSTM1', 'PDE1C', 'KNDC1', 'DUOXA1', 'B3GALT5.AS1', 'PCYT1B', 'IL22RA1', 'LOC148709', 'KLHL4', 'PPP1R36', 'HOXD3', 'TARP', 'FAM57B', 'OR7E91P', 'CAMP', 'LOC90768', 'LOC441455', 'JPH3', 'CPEB1', 'LUZP2', 'FLJ37201', 'IL12RB2', 'RELN', 'FUT7', 'LBX2', 'SCARA5', 'RIMS1', 'PLA2G5', 'GPR18', 'MNX1', 'ZBED3.AS1', 'HIST1H2BN', 'SLC22A18AS', 'HOXB13', 'KCNE1', 'CD177', 'TUBB8', 'ZC3H12D', 'IGSF5', 'ASTN1', 'CIDEA', 'TCHH', 'KCNE2', 'ONECUT2', 'IRX4', 'C10ORF128', 'GAL', 'WDR72', 'CHRNA6', 'SP5', 'BTBD8', 'FAM135B', 'SLC16A10', 'SCN7A', 'MGC16142', 'HOXB8', 'SCART1', 'LINC01124', 'RSPH4A', 'CCDC183', 'ALB', 'YPEL4', 'GBP1P1', 'CCDC7', 'DCSTAMP', 'GRIN2C', 'CELF5', 'MGAT5B', 'CXXC4', 'SLC35F1', 'GPR3', 'CXCR5', 'HOXA11', 'PYDC1', 'CCDC153', 'OBP2B', 'SLC30A2', 'ATP13A5', 'NIPAL1', 'SKIDA1', 'SRL', 'FOXJ1', 'PCSK9', 'LRP1B', 'RPGRIP1', 'WT1', 'TNFRSF9', 'PCAT18', 'STRC', 'SLC18A2', 'INSM1', 'NOXO1', 'CNNM1', 'GPR174', 'PCK1', 'MARCO', 'GPX2', 'FOXD4', 'SLC25A53', 'PPP4R4', 'DMRT3', 'C17ORF104', 'IL20', 'LBP', 'CRISP3', 'KLHL14', 'FOXD1', 'NOS2', 'PKNOX2', 'INHA', 'COL23A1', 'TNFRSF17', 'BTLA', 'AVPR2', 'ADH1C', 'GPLD1', 'PARP15', 'CXCL2', 'MYBPC1', 'GLOD5', 'CST9', 'GPR55', 'SLCO4C1', 'PFN1P2', 'BCL2L14', 'STEAP1B', 'C2ORF40', 'SLC23A1', 'ULBP2', 'VSIG2', 'SCN3A', 'AMH', 'VAT1L', 'CXCR2P1', 'ZNF98', 'DHRS4L1', 'CYSLTR2', 'ZNF454', 'RNF212', 'HAP1', 'TPSG1', 'VGLL1', 'FAM178B', 'FAM218A', 'P2RX1', 'ORM1', 'DBIL5P', 'TMEM105', 'DKK1', 'SYN2', 'EMILIN3', 'ZNF488', 'IL23A', 'SIGLEC17P', 'CRYM', 'AMBP', 'DPY19L2P2', 'PRKG2', 'CXCL1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'CTCFL', 'LRRC2', 'FABP7', 'GPBAR1', 'BRINP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'BDKRB1', 'XIRP1', 'TENM1', 'FUT6', 'LINC00930', 'RERGL', 'BMPER', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'RDM1', 'CECR2', 'CLEC12A', 'HCG27', 'ABHD11.AS1', 'FAM184B', 'PKD1L1', 'PCDHGA3', 'SORCS1', 'SEC14L5', 'WSCD2', 'SSUH2', 'CBLN2', 'ECEL1', 'SPESP1', 'FSCN2', 'CCL17', 'DMRT2', 'ZNF732', 'FAM162B', 'GRIA3', 'TMEM217', 'RSPO1', 'GNB3', 'CTSG', 'RGS6', 'HOXD4', 'PIANP', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'RNF175', 'IL1R2', 'ADAMTS19', 'SERPINA6', 'MT1A', 'RASL10A', 'DIRC3', 'PRSS21', 'HECTD2.AS1', 'PFKFB1', 'POM121L9P', 'CYP46A1', 'LRRC16B', 'SMIM5', 'CAPN11', 'FOXC2', 'ZNF804A', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'VIPR2', 'CYSRT1', 'GPR87', 'IGF2BP3', 'XKR9', 'EMX1', 'SLC26A10', 'HOGA1', 'CA9', 'CEP83.AS1', 'HS3ST3B1', 'SLC13A2', 'HTR7', 'WIPF3', 'ULBP1', 'ZSCAN1', 'ZBTB16', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CYP26A1', 'CITED1', 'ROPN1L', 'MAPT.IT1', 'ANKK1', 'WFDC3', 'GZMM', 'M1AP', 'PVALB', 'FIRRE', 'CDHR1', 'MYO3B', 'IGSF22', 'MRAP2', 'SPAG17', 'INE2', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'CRTAC1', 'MROH7', 'PYGM', 'BTC', 'PCDHA12', 'CFAP61', 'KCNT2', 'HEATR4', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'CLEC4E', 'MIA', 'OPCML', 'ADGRF1', 'LRRC4B', 'NWD1', 'SRSF12', 'B3GAT1', 'CCBE1', 'CIDEC', 'HPDL', 'LINC00173', 'TMEM59L', 'IL11', 'LSAMP', 'RNF182', 'TSPAN8', 'GAS2', 'FASLG', 'KCNA6', 'LOC613037', 'KLK6', 'GALNT13', 'ABCC6P2', 'DHDH', 'NLRP7', 'SMC1B', 'FRMPD1', 'SCN3B', 'RFPL1S', 'C15ORF56', 'COL28A1', 'FAM83A', 'SLC16A11', 'PSORS1C1', 'PTCHD1', 'SLC24A5', 'TUSC5', 'C9ORF47', 'ADGRG2', 'ANO5', 'SLC6A14', 'TMPRSS4', 'RUFY4', 'INTS4P2', 'IGSF1', 'KCNQ3', 'PIK3C2G', 'LOC100133669', 'CYP4F12', 'LINC00908', 'NBPF4', 'MYOM2', 'EBF2', 'VENTX', 'FAM157A', 'DSCAML1', 'PCDHA5', 'PTPRN', 'MAG', 'PLAC1', 'DLX5', 'CCNI2', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'CNTN2', 'FAM19A2', 'KLK7', 'ZBTB20', 'NKX3.2', 'SFTPA2', 'BRE.AS1', 'SLC6A17', 'OR2W3', 'PTPRR', 'RYR3', 'GHRLOS', 'ABCC2', 'TFAP2E', 'ABCD2', 'CD160', 'CD1A', 'GRIA2', 'RGS9', 'CCDC144A', 'DEFB1', 'CDKL2', 'DCX', 'DLK2', 'CACNA1I', 'PWAR5', 'GGT3P', 'MYO16', 'SLC6A11', 'WDR17', 'MSMB', 'CHRFAM7A', 'BTBD19', 'MMP12', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'AGBL4', 'SLC39A2', 'LY6H', 'XCL2', 'SPAG8', 'TUBAL3', 'S100A7', 'P2RY12', 'PCBP3', 'SNORD116.4', 'KCNH3', 'LINC00202.1', 'ZNF727', 'ARL9', 'TM6SF2', 'MAK', 'GRID2IP', 'MPL', 'HRCT1', 'TCN1', 'ELOVL3', 'SLC46A2', 'SYCE3', 'CD70', 'TCTEX1D1', 'NOX5', 'GPM6A', 'GRIN2A', 'PGLYRP2', 'TIGD4', 'SYCE2', 'ARMC3', 'JAKMIP1', 'RAB9B', 'MKRN3', 'CTAGE6', 'BAIAP2L2', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'LONRF3', 'AGAP7P', 'ACY3', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'KLK10', 'SCN9A', 'ACHE', 'AKR1E2', 'SCN2A', 'PRPH2', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'HRC', 'GPR82', 'PAH', 'LOC285593', 'CHODL', 'TTBK1', 'CXADRP3', 'MLLT4.AS1', 'TTYH1', 'CHST9', 'ADGRL3', 'APOBEC3A', 'GABRB3', 'SLC25A34', 'HIST1H2BH', 'TRH', 'BRSK2', 'MAPK4', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'DGCR5', 'CAMK4', 'EPYC', 'MUC15', 'GBP6', 'GPR63', 'ANKLE1', 'CAPSL', 'IL17D', 'ROBO2', 'SLC35F3', 'AIM1L', 'ASGR1', 'HAMP', 'TNFSF11', 'RMRP', 'FAM201A', 'PCDHA1', 'MYO15A', 'FAM159A', 'CHKB.AS1', 'DUSP9', 'NMU', 'PTX3', 'DCLK3', 'NEK5', 'RHCE', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'LOC100132215', 'RUNDC3A', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'LINC00961', 'CYP2E1', 'RRN3P1', 'FOLR1', 'PNMA6A', 'ROPN1B', 'SIGLEC6', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'ADRA2B', 'THSD7B', 'SLC2A14', 'ATP13A4', 'MT1L', 'DPEP1', 'KISS1R', 'KIF19', 'TMEM150B', 'IL1RL1', 'ZMAT4', 'CCR10', 'IL24', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'LIN7A', 'TTLL9', 'WBP2NL', 'RHBG', 'A2ML1', 'PRRT4', 'KIAA1210', 'NIPAL4', 'GPR135', 'LOC90246', 'GNMT', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'FIGF', 'OXGR1', 'CBLN1', 'B3GALT5', 'PCDHB18P', 'RRAD', 'MAP7D2', 'DPF3', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'SLC5A8', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PON3', 'PCDH20', 'GABRB2', 'MASP2', 'TIFAB', 'PHKG1', 'DNAH11', 'KLK8', 'FOXN1', 'WFIKKN1', 'CD19', 'CLCA2', 'DCST2', 'ANK1', 'LINC00669', 'WNT10A', 'GPR171', 'FREM2', 'KCNB1', 'CRB2', 'C19ORF45', 'SLC26A3', 'UCA1', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'RASAL1', 'LINC00685', 'TYMSOS', 'RIC3', 'ANO2', 'CD1E', 'TTC41P', 'COLCA1', 'NEURL3', 'LOC646999', 'CST2', 'MED12L', 'HNRNPCL3', 'PCDHGC5', 'NRXN1', 'RAB3B', 'STXBP6', 'FAM182B', 'MYEOV', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'EYA1', 'ARHGEF33', 'CLPSL1', 'CR2', 'KIF4B', 'FNDC8', 'CXCR2', 'PATL2', 'AJAP1', 'ZNF676', 'VSTM2A', 'CLDN14', 'KCNRG', 'TDRD9', 'CLEC4F', 'LPAR4', 'MSLN', 'C9ORF117', 'MAGEL2', 'FAM43B', 'HAPLN1', 'NDP', 'VIT', 'PDCD1', 'DMRTC1B', 'TRABD2A', 'ABHD1', 'MKX', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.1795758233170425e-15 NRMSE: 6.535182273969263e-16 MAPE: 6.4455319297913066e-12 Pearson Correlation: -0.03109237491635962 Spearman Correlation: -0.034441825957929655 Coefficient of Determination: -3.0558956110736704 RMSE: 0.9484751206680029 NRMSE: 0.2267668724401097 MAPE: 356.23830542083874 Predictor: ElasticNet Pearson Correlation: 0.8600551949347799 Spearman Correlation: 0.8267802328243143 Coefficient of Determination: 0.6564195300244403 RMSE: 0.368865506832626 NRMSE: 0.05767578873154968 MAPE: 302.4456276926149 Pearson Correlation: 0.13209281074359497 Spearman Correlation: 0.11895659546877142 Coefficient of Determination: -0.34764785728462 RMSE: 0.546727314289509 NRMSE: 0.13071470240747599 MAPE: 164.89913804405182 Predictor: RandomForests Pearson Correlation: 0.5535967567285347 Spearman Correlation: 0.5525674893556289 Coefficient of Determination: 0.1667199082070857 RMSE: 0.5744461378623131 NRMSE: 0.08982036398441297 MAPE: 348.7358959252459 Pearson Correlation: 0.17022854876886978 Spearman Correlation: 0.19696754323619997 Coefficient of Determination: -0.02311614940657547 RMSE: 0.476370686161491 NRMSE: 0.11389343617881006 MAPE: 94.07468194587855 Protein: BRCA2 x_train_column_count: 1002 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'LINC01119', 'IQUB', 'CBLN4', 'LINC01341', 'ECT2L', 'SOX8', 'PAX2', 'EYS', 'NKPD1', 'ETV2', 'FXYD1', 'RNF138P1', 'MYCBPAP', 'TEKT3', 'XPNPEP2', 'CCR8', 'PPP1R3G', 'CCIN', 'STKLD1', 'C19ORF18', 'SLC30A8', 'UGT8', 'SLC28A3', 'JPH4', 'PLP1', 'UBE2Q2P1', 'SLC25A18', 'METTL7B', 'HEPACAM2', 'TEX14', 'IDI2.AS1', 'CASQ1', 'LINC00482', 'S100A3', 'ALOXE3', 'GLIS1', 'SGK2', 'NR1I3', 'CCDC36', 'PBX4', 'ZNF843', 'LRIT3', 'WNT2B', 'CACNG1', 'MS4A15', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'LPAR3', 'AOC2', 'TNNI3K', 'BCHE', 'GJB1', 'C9ORF43', 'PITX2', 'FCRL6', 'CCDC151', 'PNCK', 'CKMT2', 'FAM189A1', 'DQX1', 'ABCA17P', 'CACNA1G', 'C1ORF101', 'ENPP6', 'NLRP12', 'C2ORF50', 'ADCYAP1', 'CLDN9', 'FAM90A1', 'SLC6A20', 'IYD', 'SPIB', 'FAM95B1', 'CA3', 'OTOA', 'ZNF835', 'PCDH9', 'C2CD4A', 'C1ORF95', 'RYR2', 'LINC01550', 'ZCCHC18', 'CLEC3A', 'VSIG1', 'AURKC', 'ULBP3', 'CLECL1', 'CCDC158', 'CCDC65', 'IL20RB', 'ARC', 'GSDMC', 'TAS1R3', 'DDX11L2', 'SCN2B', 'TTC16', 'PCSK1N', 'SVOPL', 'ALDH8A1', 'BPIFB2', 'CRYGS', 'MYOZ1', 'COLCA2', 'GSTM1', 'PDE1C', 'KNDC1', 'DUOXA1', 'B3GALT5.AS1', 'PCYT1B', 'IL22RA1', 'LOC148709', 'KLHL4', 'PPP1R36', 'HOXD3', 'TARP', 'FAM57B', 'OR7E91P', 'CAMP', 'LOC90768', 'LOC441455', 'JPH3', 'CPEB1', 'LUZP2', 'FLJ37201', 'IL12RB2', 'RELN', 'FUT7', 'LBX2', 'SCARA5', 'RIMS1', 'PLA2G5', 'GPR18', 'MNX1', 'ZBED3.AS1', 'HIST1H2BN', 'SLC22A18AS', 'HOXB13', 'KCNE1', 'CD177', 'TUBB8', 'ZC3H12D', 'IGSF5', 'ASTN1', 'CIDEA', 'TCHH', 'KCNE2', 'ONECUT2', 'IRX4', 'C10ORF128', 'GAL', 'WDR72', 'CHRNA6', 'SP5', 'BTBD8', 'FAM135B', 'SLC16A10', 'SCN7A', 'MGC16142', 'HOXB8', 'SCART1', 'LINC01124', 'RSPH4A', 'CCDC183', 'ALB', 'YPEL4', 'GBP1P1', 'CCDC7', 'DCSTAMP', 'GRIN2C', 'CELF5', 'MGAT5B', 'CXXC4', 'SLC35F1', 'GPR3', 'CXCR5', 'HOXA11', 'PYDC1', 'CCDC153', 'OBP2B', 'SLC30A2', 'ATP13A5', 'NIPAL1', 'SKIDA1', 'SRL', 'FOXJ1', 'PCSK9', 'LRP1B', 'RPGRIP1', 'WT1', 'TNFRSF9', 'PCAT18', 'STRC', 'SLC18A2', 'INSM1', 'NOXO1', 'CNNM1', 'GPR174', 'PCK1', 'MARCO', 'GPX2', 'FOXD4', 'SLC25A53', 'PPP4R4', 'DMRT3', 'C17ORF104', 'IL20', 'LBP', 'CRISP3', 'KLHL14', 'FOXD1', 'NOS2', 'PKNOX2', 'INHA', 'COL23A1', 'TNFRSF17', 'BTLA', 'AVPR2', 'ADH1C', 'GPLD1', 'PARP15', 'CXCL2', 'MYBPC1', 'GLOD5', 'CST9', 'GPR55', 'SLCO4C1', 'PFN1P2', 'BCL2L14', 'STEAP1B', 'C2ORF40', 'SLC23A1', 'ULBP2', 'VSIG2', 'SCN3A', 'AMH', 'VAT1L', 'CXCR2P1', 'ZNF98', 'DHRS4L1', 'CYSLTR2', 'ZNF454', 'RNF212', 'HAP1', 'TPSG1', 'VGLL1', 'FAM178B', 'FAM218A', 'P2RX1', 'ORM1', 'DBIL5P', 'TMEM105', 'DKK1', 'SYN2', 'EMILIN3', 'ZNF488', 'IL23A', 'SIGLEC17P', 'CRYM', 'AMBP', 'DPY19L2P2', 'PRKG2', 'CXCL1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'CTCFL', 'LRRC2', 'FABP7', 'GPBAR1', 'BRINP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'BDKRB1', 'XIRP1', 'TENM1', 'FUT6', 'LINC00930', 'RERGL', 'BMPER', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'RDM1', 'CECR2', 'CLEC12A', 'HCG27', 'ABHD11.AS1', 'FAM184B', 'PKD1L1', 'PCDHGA3', 'SORCS1', 'SEC14L5', 'WSCD2', 'SSUH2', 'CBLN2', 'ECEL1', 'SPESP1', 'FSCN2', 'CCL17', 'DMRT2', 'ZNF732', 'FAM162B', 'GRIA3', 'TMEM217', 'RSPO1', 'GNB3', 'CTSG', 'RGS6', 'HOXD4', 'PIANP', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'RNF175', 'IL1R2', 'ADAMTS19', 'SERPINA6', 'MT1A', 'RASL10A', 'DIRC3', 'PRSS21', 'HECTD2.AS1', 'PFKFB1', 'POM121L9P', 'CYP46A1', 'LRRC16B', 'SMIM5', 'CAPN11', 'FOXC2', 'ZNF804A', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'VIPR2', 'CYSRT1', 'GPR87', 'IGF2BP3', 'XKR9', 'EMX1', 'SLC26A10', 'HOGA1', 'CA9', 'CEP83.AS1', 'HS3ST3B1', 'SLC13A2', 'HTR7', 'WIPF3', 'ULBP1', 'ZSCAN1', 'ZBTB16', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CYP26A1', 'CITED1', 'ROPN1L', 'MAPT.IT1', 'ANKK1', 'WFDC3', 'GZMM', 'M1AP', 'PVALB', 'FIRRE', 'CDHR1', 'MYO3B', 'IGSF22', 'MRAP2', 'SPAG17', 'INE2', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'CRTAC1', 'MROH7', 'PYGM', 'BTC', 'PCDHA12', 'CFAP61', 'KCNT2', 'HEATR4', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'CLEC4E', 'MIA', 'OPCML', 'ADGRF1', 'LRRC4B', 'NWD1', 'SRSF12', 'B3GAT1', 'CCBE1', 'CIDEC', 'HPDL', 'LINC00173', 'TMEM59L', 'IL11', 'LSAMP', 'RNF182', 'TSPAN8', 'GAS2', 'FASLG', 'KCNA6', 'LOC613037', 'KLK6', 'GALNT13', 'ABCC6P2', 'DHDH', 'NLRP7', 'SMC1B', 'FRMPD1', 'SCN3B', 'RFPL1S', 'C15ORF56', 'COL28A1', 'FAM83A', 'SLC16A11', 'PSORS1C1', 'PTCHD1', 'SLC24A5', 'TUSC5', 'C9ORF47', 'ADGRG2', 'ANO5', 'SLC6A14', 'TMPRSS4', 'RUFY4', 'INTS4P2', 'IGSF1', 'KCNQ3', 'PIK3C2G', 'LOC100133669', 'CYP4F12', 'LINC00908', 'NBPF4', 'MYOM2', 'EBF2', 'VENTX', 'FAM157A', 'DSCAML1', 'PCDHA5', 'PTPRN', 'MAG', 'PLAC1', 'DLX5', 'CCNI2', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'CNTN2', 'FAM19A2', 'KLK7', 'ZBTB20', 'NKX3.2', 'SFTPA2', 'BRE.AS1', 'SLC6A17', 'OR2W3', 'PTPRR', 'RYR3', 'GHRLOS', 'ABCC2', 'TFAP2E', 'ABCD2', 'CD160', 'CD1A', 'GRIA2', 'RGS9', 'CCDC144A', 'DEFB1', 'CDKL2', 'DCX', 'DLK2', 'CACNA1I', 'PWAR5', 'GGT3P', 'MYO16', 'SLC6A11', 'WDR17', 'MSMB', 'CHRFAM7A', 'BTBD19', 'MMP12', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'AGBL4', 'SLC39A2', 'LY6H', 'XCL2', 'SPAG8', 'TUBAL3', 'S100A7', 'P2RY12', 'PCBP3', 'SNORD116.4', 'KCNH3', 'LINC00202.1', 'ZNF727', 'ARL9', 'TM6SF2', 'MAK', 'GRID2IP', 'MPL', 'HRCT1', 'TCN1', 'ELOVL3', 'SLC46A2', 'SYCE3', 'CD70', 'TCTEX1D1', 'NOX5', 'GPM6A', 'GRIN2A', 'PGLYRP2', 'TIGD4', 'SYCE2', 'ARMC3', 'JAKMIP1', 'RAB9B', 'MKRN3', 'CTAGE6', 'BAIAP2L2', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'LONRF3', 'AGAP7P', 'ACY3', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'KLK10', 'SCN9A', 'ACHE', 'AKR1E2', 'SCN2A', 'PRPH2', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'HRC', 'GPR82', 'PAH', 'LOC285593', 'CHODL', 'TTBK1', 'CXADRP3', 'MLLT4.AS1', 'TTYH1', 'CHST9', 'ADGRL3', 'APOBEC3A', 'GABRB3', 'SLC25A34', 'HIST1H2BH', 'TRH', 'BRSK2', 'MAPK4', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'DGCR5', 'CAMK4', 'EPYC', 'MUC15', 'GBP6', 'GPR63', 'ANKLE1', 'CAPSL', 'IL17D', 'ROBO2', 'SLC35F3', 'AIM1L', 'ASGR1', 'HAMP', 'TNFSF11', 'RMRP', 'FAM201A', 'PCDHA1', 'MYO15A', 'FAM159A', 'CHKB.AS1', 'DUSP9', 'NMU', 'PTX3', 'DCLK3', 'NEK5', 'RHCE', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'LOC100132215', 'RUNDC3A', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'LINC00961', 'CYP2E1', 'RRN3P1', 'FOLR1', 'PNMA6A', 'ROPN1B', 'SIGLEC6', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'ADRA2B', 'THSD7B', 'SLC2A14', 'ATP13A4', 'MT1L', 'DPEP1', 'KISS1R', 'KIF19', 'TMEM150B', 'IL1RL1', 'ZMAT4', 'CCR10', 'IL24', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'LIN7A', 'TTLL9', 'WBP2NL', 'RHBG', 'A2ML1', 'PRRT4', 'KIAA1210', 'NIPAL4', 'GPR135', 'LOC90246', 'GNMT', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'FIGF', 'OXGR1', 'CBLN1', 'B3GALT5', 'PCDHB18P', 'RRAD', 'MAP7D2', 'DPF3', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'SLC5A8', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PON3', 'PCDH20', 'GABRB2', 'MASP2', 'TIFAB', 'PHKG1', 'DNAH11', 'KLK8', 'FOXN1', 'WFIKKN1', 'CD19', 'CLCA2', 'DCST2', 'ANK1', 'LINC00669', 'WNT10A', 'GPR171', 'FREM2', 'KCNB1', 'CRB2', 'C19ORF45', 'SLC26A3', 'UCA1', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'RASAL1', 'LINC00685', 'TYMSOS', 'RIC3', 'ANO2', 'CD1E', 'TTC41P', 'COLCA1', 'NEURL3', 'LOC646999', 'CST2', 'MED12L', 'HNRNPCL3', 'PCDHGC5', 'NRXN1', 'RAB3B', 'STXBP6', 'FAM182B', 'MYEOV', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'EYA1', 'ARHGEF33', 'CLPSL1', 'CR2', 'KIF4B', 'FNDC8', 'CXCR2', 'PATL2', 'AJAP1', 'ZNF676', 'VSTM2A', 'CLDN14', 'KCNRG', 'TDRD9', 'CLEC4F', 'LPAR4', 'MSLN', 'C9ORF117', 'MAGEL2', 'FAM43B', 'HAPLN1', 'NDP', 'VIT', 'PDCD1', 'DMRTC1B', 'TRABD2A', 'ABHD1', 'MKX', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 9.212457511059902e-16 NRMSE: 6.209026980198355e-16 MAPE: 2.1387216234280153e-12 Pearson Correlation: 0.1688313895385826 Spearman Correlation: 0.12370478434893205 Coefficient of Determination: -0.9396254491800033 RMSE: 0.2982217623964732 NRMSE: 0.20511989379971882 MAPE: 688.4837800768266 Predictor: ElasticNet Pearson Correlation: 0.5856048975398701 Spearman Correlation: 0.5737590021002271 Coefficient of Determination: 0.25555112853902817 RMSE: 0.16397802526540897 NRMSE: 0.11051817409309639 MAPE: 171.17684406596263 Pearson Correlation: 0.33736208112879384 Spearman Correlation: 0.3188443746181374 Coefficient of Determination: 0.09901780037717145 RMSE: 0.2032537191082664 NRMSE: 0.13979992923004245 MAPE: 136.0606451923821 Predictor: RandomForests Pearson Correlation: 0.5589040342698625 Spearman Correlation: 0.5463533701264748 Coefficient of Determination: 0.16517247711294425 RMSE: 0.17364672360953026 NRMSE: 0.11703469900623452 MAPE: 139.42848410319692 Pearson Correlation: 0.26718227160055247 Spearman Correlation: 0.23697302958889763 Coefficient of Determination: 0.050534593521097904 RMSE: 0.20865075884577178 NRMSE: 0.1435120668315841 MAPE: 136.471989840799 Protein: CDKN2A x_train_column_count: 1002 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'LINC01119', 'IQUB', 'CBLN4', 'LINC01341', 'ECT2L', 'SOX8', 'PAX2', 'EYS', 'NKPD1', 'ETV2', 'FXYD1', 'RNF138P1', 'MYCBPAP', 'TEKT3', 'XPNPEP2', 'CCR8', 'PPP1R3G', 'CCIN', 'STKLD1', 'C19ORF18', 'SLC30A8', 'UGT8', 'SLC28A3', 'JPH4', 'PLP1', 'UBE2Q2P1', 'SLC25A18', 'METTL7B', 'HEPACAM2', 'TEX14', 'IDI2.AS1', 'CASQ1', 'LINC00482', 'S100A3', 'ALOXE3', 'GLIS1', 'SGK2', 'NR1I3', 'CCDC36', 'PBX4', 'ZNF843', 'LRIT3', 'WNT2B', 'CACNG1', 'MS4A15', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'LPAR3', 'AOC2', 'TNNI3K', 'BCHE', 'GJB1', 'C9ORF43', 'PITX2', 'FCRL6', 'CCDC151', 'PNCK', 'CKMT2', 'FAM189A1', 'DQX1', 'ABCA17P', 'CACNA1G', 'C1ORF101', 'ENPP6', 'NLRP12', 'C2ORF50', 'ADCYAP1', 'CLDN9', 'FAM90A1', 'SLC6A20', 'IYD', 'SPIB', 'FAM95B1', 'CA3', 'OTOA', 'ZNF835', 'PCDH9', 'C2CD4A', 'C1ORF95', 'RYR2', 'LINC01550', 'ZCCHC18', 'CLEC3A', 'VSIG1', 'AURKC', 'ULBP3', 'CLECL1', 'CCDC158', 'CCDC65', 'IL20RB', 'ARC', 'GSDMC', 'TAS1R3', 'DDX11L2', 'SCN2B', 'TTC16', 'PCSK1N', 'SVOPL', 'ALDH8A1', 'BPIFB2', 'CRYGS', 'MYOZ1', 'COLCA2', 'GSTM1', 'PDE1C', 'KNDC1', 'DUOXA1', 'B3GALT5.AS1', 'PCYT1B', 'IL22RA1', 'LOC148709', 'KLHL4', 'PPP1R36', 'HOXD3', 'TARP', 'FAM57B', 'OR7E91P', 'CAMP', 'LOC90768', 'LOC441455', 'JPH3', 'CPEB1', 'LUZP2', 'FLJ37201', 'IL12RB2', 'RELN', 'FUT7', 'LBX2', 'SCARA5', 'RIMS1', 'PLA2G5', 'GPR18', 'MNX1', 'ZBED3.AS1', 'HIST1H2BN', 'SLC22A18AS', 'HOXB13', 'KCNE1', 'CD177', 'TUBB8', 'ZC3H12D', 'IGSF5', 'ASTN1', 'CIDEA', 'TCHH', 'KCNE2', 'ONECUT2', 'IRX4', 'C10ORF128', 'GAL', 'WDR72', 'CHRNA6', 'SP5', 'BTBD8', 'FAM135B', 'SLC16A10', 'SCN7A', 'MGC16142', 'HOXB8', 'SCART1', 'LINC01124', 'RSPH4A', 'CCDC183', 'ALB', 'YPEL4', 'GBP1P1', 'CCDC7', 'DCSTAMP', 'GRIN2C', 'CELF5', 'MGAT5B', 'CXXC4', 'SLC35F1', 'GPR3', 'CXCR5', 'HOXA11', 'PYDC1', 'CCDC153', 'OBP2B', 'SLC30A2', 'ATP13A5', 'NIPAL1', 'SKIDA1', 'SRL', 'FOXJ1', 'PCSK9', 'LRP1B', 'RPGRIP1', 'WT1', 'TNFRSF9', 'PCAT18', 'STRC', 'SLC18A2', 'INSM1', 'NOXO1', 'CNNM1', 'GPR174', 'PCK1', 'MARCO', 'GPX2', 'FOXD4', 'SLC25A53', 'PPP4R4', 'DMRT3', 'C17ORF104', 'IL20', 'LBP', 'CRISP3', 'KLHL14', 'FOXD1', 'NOS2', 'PKNOX2', 'INHA', 'COL23A1', 'TNFRSF17', 'BTLA', 'AVPR2', 'ADH1C', 'GPLD1', 'PARP15', 'CXCL2', 'MYBPC1', 'GLOD5', 'CST9', 'GPR55', 'SLCO4C1', 'PFN1P2', 'BCL2L14', 'STEAP1B', 'C2ORF40', 'SLC23A1', 'ULBP2', 'VSIG2', 'SCN3A', 'AMH', 'VAT1L', 'CXCR2P1', 'ZNF98', 'DHRS4L1', 'CYSLTR2', 'ZNF454', 'RNF212', 'HAP1', 'TPSG1', 'VGLL1', 'FAM178B', 'FAM218A', 'P2RX1', 'ORM1', 'DBIL5P', 'TMEM105', 'DKK1', 'SYN2', 'EMILIN3', 'ZNF488', 'IL23A', 'SIGLEC17P', 'CRYM', 'AMBP', 'DPY19L2P2', 'PRKG2', 'CXCL1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'CTCFL', 'LRRC2', 'FABP7', 'GPBAR1', 'BRINP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'BDKRB1', 'XIRP1', 'TENM1', 'FUT6', 'LINC00930', 'RERGL', 'BMPER', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'RDM1', 'CECR2', 'CLEC12A', 'HCG27', 'ABHD11.AS1', 'FAM184B', 'PKD1L1', 'PCDHGA3', 'SORCS1', 'SEC14L5', 'WSCD2', 'SSUH2', 'CBLN2', 'ECEL1', 'SPESP1', 'FSCN2', 'CCL17', 'DMRT2', 'ZNF732', 'FAM162B', 'GRIA3', 'TMEM217', 'RSPO1', 'GNB3', 'CTSG', 'RGS6', 'HOXD4', 'PIANP', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'RNF175', 'IL1R2', 'ADAMTS19', 'SERPINA6', 'MT1A', 'RASL10A', 'DIRC3', 'PRSS21', 'HECTD2.AS1', 'PFKFB1', 'POM121L9P', 'CYP46A1', 'LRRC16B', 'SMIM5', 'CAPN11', 'FOXC2', 'ZNF804A', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'VIPR2', 'CYSRT1', 'GPR87', 'IGF2BP3', 'XKR9', 'EMX1', 'SLC26A10', 'HOGA1', 'CA9', 'CEP83.AS1', 'HS3ST3B1', 'SLC13A2', 'HTR7', 'WIPF3', 'ULBP1', 'ZSCAN1', 'ZBTB16', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CYP26A1', 'CITED1', 'ROPN1L', 'MAPT.IT1', 'ANKK1', 'WFDC3', 'GZMM', 'M1AP', 'PVALB', 'FIRRE', 'CDHR1', 'MYO3B', 'IGSF22', 'MRAP2', 'SPAG17', 'INE2', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'CRTAC1', 'MROH7', 'PYGM', 'BTC', 'PCDHA12', 'CFAP61', 'KCNT2', 'HEATR4', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'CLEC4E', 'MIA', 'OPCML', 'ADGRF1', 'LRRC4B', 'NWD1', 'SRSF12', 'B3GAT1', 'CCBE1', 'CIDEC', 'HPDL', 'LINC00173', 'TMEM59L', 'IL11', 'LSAMP', 'RNF182', 'TSPAN8', 'GAS2', 'FASLG', 'KCNA6', 'LOC613037', 'KLK6', 'GALNT13', 'ABCC6P2', 'DHDH', 'NLRP7', 'SMC1B', 'FRMPD1', 'SCN3B', 'RFPL1S', 'C15ORF56', 'COL28A1', 'FAM83A', 'SLC16A11', 'PSORS1C1', 'PTCHD1', 'SLC24A5', 'TUSC5', 'C9ORF47', 'ADGRG2', 'ANO5', 'SLC6A14', 'TMPRSS4', 'RUFY4', 'INTS4P2', 'IGSF1', 'KCNQ3', 'PIK3C2G', 'LOC100133669', 'CYP4F12', 'LINC00908', 'NBPF4', 'MYOM2', 'EBF2', 'VENTX', 'FAM157A', 'DSCAML1', 'PCDHA5', 'PTPRN', 'MAG', 'PLAC1', 'DLX5', 'CCNI2', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'CNTN2', 'FAM19A2', 'KLK7', 'ZBTB20', 'NKX3.2', 'SFTPA2', 'BRE.AS1', 'SLC6A17', 'OR2W3', 'PTPRR', 'RYR3', 'GHRLOS', 'ABCC2', 'TFAP2E', 'ABCD2', 'CD160', 'CD1A', 'GRIA2', 'RGS9', 'CCDC144A', 'DEFB1', 'CDKL2', 'DCX', 'DLK2', 'CACNA1I', 'PWAR5', 'GGT3P', 'MYO16', 'SLC6A11', 'WDR17', 'MSMB', 'CHRFAM7A', 'BTBD19', 'MMP12', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'AGBL4', 'SLC39A2', 'LY6H', 'XCL2', 'SPAG8', 'TUBAL3', 'S100A7', 'P2RY12', 'PCBP3', 'SNORD116.4', 'KCNH3', 'LINC00202.1', 'ZNF727', 'ARL9', 'TM6SF2', 'MAK', 'GRID2IP', 'MPL', 'HRCT1', 'TCN1', 'ELOVL3', 'SLC46A2', 'SYCE3', 'CD70', 'TCTEX1D1', 'NOX5', 'GPM6A', 'GRIN2A', 'PGLYRP2', 'TIGD4', 'SYCE2', 'ARMC3', 'JAKMIP1', 'RAB9B', 'MKRN3', 'CTAGE6', 'BAIAP2L2', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'LONRF3', 'AGAP7P', 'ACY3', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'KLK10', 'SCN9A', 'ACHE', 'AKR1E2', 'SCN2A', 'PRPH2', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'HRC', 'GPR82', 'PAH', 'LOC285593', 'CHODL', 'TTBK1', 'CXADRP3', 'MLLT4.AS1', 'TTYH1', 'CHST9', 'ADGRL3', 'APOBEC3A', 'GABRB3', 'SLC25A34', 'HIST1H2BH', 'TRH', 'BRSK2', 'MAPK4', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'DGCR5', 'CAMK4', 'EPYC', 'MUC15', 'GBP6', 'GPR63', 'ANKLE1', 'CAPSL', 'IL17D', 'ROBO2', 'SLC35F3', 'AIM1L', 'ASGR1', 'HAMP', 'TNFSF11', 'RMRP', 'FAM201A', 'PCDHA1', 'MYO15A', 'FAM159A', 'CHKB.AS1', 'DUSP9', 'NMU', 'PTX3', 'DCLK3', 'NEK5', 'RHCE', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'LOC100132215', 'RUNDC3A', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'LINC00961', 'CYP2E1', 'RRN3P1', 'FOLR1', 'PNMA6A', 'ROPN1B', 'SIGLEC6', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'ADRA2B', 'THSD7B', 'SLC2A14', 'ATP13A4', 'MT1L', 'DPEP1', 'KISS1R', 'KIF19', 'TMEM150B', 'IL1RL1', 'ZMAT4', 'CCR10', 'IL24', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'LIN7A', 'TTLL9', 'WBP2NL', 'RHBG', 'A2ML1', 'PRRT4', 'KIAA1210', 'NIPAL4', 'GPR135', 'LOC90246', 'GNMT', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'FIGF', 'OXGR1', 'CBLN1', 'B3GALT5', 'PCDHB18P', 'RRAD', 'MAP7D2', 'DPF3', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'SLC5A8', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PON3', 'PCDH20', 'GABRB2', 'MASP2', 'TIFAB', 'PHKG1', 'DNAH11', 'KLK8', 'FOXN1', 'WFIKKN1', 'CD19', 'CLCA2', 'DCST2', 'ANK1', 'LINC00669', 'WNT10A', 'GPR171', 'FREM2', 'KCNB1', 'CRB2', 'C19ORF45', 'SLC26A3', 'UCA1', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'RASAL1', 'LINC00685', 'TYMSOS', 'RIC3', 'ANO2', 'CD1E', 'TTC41P', 'COLCA1', 'NEURL3', 'LOC646999', 'CST2', 'MED12L', 'HNRNPCL3', 'PCDHGC5', 'NRXN1', 'RAB3B', 'STXBP6', 'FAM182B', 'MYEOV', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'EYA1', 'ARHGEF33', 'CLPSL1', 'CR2', 'KIF4B', 'FNDC8', 'CXCR2', 'PATL2', 'AJAP1', 'ZNF676', 'VSTM2A', 'CLDN14', 'KCNRG', 'TDRD9', 'CLEC4F', 'LPAR4', 'MSLN', 'C9ORF117', 'MAGEL2', 'FAM43B', 'HAPLN1', 'NDP', 'VIT', 'PDCD1', 'DMRTC1B', 'TRABD2A', 'ABHD1', 'MKX', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 2.9491875811344523e-15 NRMSE: 6.885477169253017e-16 MAPE: 2.6492417894478495e-12 Pearson Correlation: 0.315192265037892 Spearman Correlation: 0.3014376737864562 Coefficient of Determination: -0.5430567164970821 RMSE: 0.8155544058208283 NRMSE: 0.25178426285722216 MAPE: 440.8158439773849 Predictor: ElasticNet Pearson Correlation: 0.8821352914930479 Spearman Correlation: 0.8594220365483297 Coefficient of Determination: 0.7242139180501903 RMSE: 0.35058613421708035 NRMSE: 0.08185145083514203 MAPE: 255.60702480951667 Pearson Correlation: 0.4204890872339228 Spearman Correlation: 0.4091796655818652 Coefficient of Determination: 0.13670129421588084 RMSE: 0.610017843312715 NRMSE: 0.1883294258629604 MAPE: 216.10032222951162 Predictor: RandomForests Pearson Correlation: 0.5741592201972807 Spearman Correlation: 0.5160346210669178 Coefficient of Determination: 0.26633468179739683 RMSE: 0.5718176520993042 NRMSE: 0.13350244025478714 MAPE: 311.5533727260833 Pearson Correlation: 0.33658809919764127 Spearman Correlation: 0.33008641005498823 Coefficient of Determination: 0.10541226579539786 RMSE: 0.6209740663903485 NRMSE: 0.19171191577609473 MAPE: 162.44238407679936 Protein: TP53 x_train_column_count: 1002 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'LINC01119', 'IQUB', 'CBLN4', 'LINC01341', 'ECT2L', 'SOX8', 'PAX2', 'EYS', 'NKPD1', 'ETV2', 'FXYD1', 'RNF138P1', 'MYCBPAP', 'TEKT3', 'XPNPEP2', 'CCR8', 'PPP1R3G', 'CCIN', 'STKLD1', 'C19ORF18', 'SLC30A8', 'UGT8', 'SLC28A3', 'JPH4', 'PLP1', 'UBE2Q2P1', 'SLC25A18', 'METTL7B', 'HEPACAM2', 'TEX14', 'IDI2.AS1', 'CASQ1', 'LINC00482', 'S100A3', 'ALOXE3', 'GLIS1', 'SGK2', 'NR1I3', 'CCDC36', 'PBX4', 'ZNF843', 'LRIT3', 'WNT2B', 'CACNG1', 'MS4A15', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'LPAR3', 'AOC2', 'TNNI3K', 'BCHE', 'GJB1', 'C9ORF43', 'PITX2', 'FCRL6', 'CCDC151', 'PNCK', 'CKMT2', 'FAM189A1', 'DQX1', 'ABCA17P', 'CACNA1G', 'C1ORF101', 'ENPP6', 'NLRP12', 'C2ORF50', 'ADCYAP1', 'CLDN9', 'FAM90A1', 'SLC6A20', 'IYD', 'SPIB', 'FAM95B1', 'CA3', 'OTOA', 'ZNF835', 'PCDH9', 'C2CD4A', 'C1ORF95', 'RYR2', 'LINC01550', 'ZCCHC18', 'CLEC3A', 'VSIG1', 'AURKC', 'ULBP3', 'CLECL1', 'CCDC158', 'CCDC65', 'IL20RB', 'ARC', 'GSDMC', 'TAS1R3', 'DDX11L2', 'SCN2B', 'TTC16', 'PCSK1N', 'SVOPL', 'ALDH8A1', 'BPIFB2', 'CRYGS', 'MYOZ1', 'COLCA2', 'GSTM1', 'PDE1C', 'KNDC1', 'DUOXA1', 'B3GALT5.AS1', 'PCYT1B', 'IL22RA1', 'LOC148709', 'KLHL4', 'PPP1R36', 'HOXD3', 'TARP', 'FAM57B', 'OR7E91P', 'CAMP', 'LOC90768', 'LOC441455', 'JPH3', 'CPEB1', 'LUZP2', 'FLJ37201', 'IL12RB2', 'RELN', 'FUT7', 'LBX2', 'SCARA5', 'RIMS1', 'PLA2G5', 'GPR18', 'MNX1', 'ZBED3.AS1', 'HIST1H2BN', 'SLC22A18AS', 'HOXB13', 'KCNE1', 'CD177', 'TUBB8', 'ZC3H12D', 'IGSF5', 'ASTN1', 'CIDEA', 'TCHH', 'KCNE2', 'ONECUT2', 'IRX4', 'C10ORF128', 'GAL', 'WDR72', 'CHRNA6', 'SP5', 'BTBD8', 'FAM135B', 'SLC16A10', 'SCN7A', 'MGC16142', 'HOXB8', 'SCART1', 'LINC01124', 'RSPH4A', 'CCDC183', 'ALB', 'YPEL4', 'GBP1P1', 'CCDC7', 'DCSTAMP', 'GRIN2C', 'CELF5', 'MGAT5B', 'CXXC4', 'SLC35F1', 'GPR3', 'CXCR5', 'HOXA11', 'PYDC1', 'CCDC153', 'OBP2B', 'SLC30A2', 'ATP13A5', 'NIPAL1', 'SKIDA1', 'SRL', 'FOXJ1', 'PCSK9', 'LRP1B', 'RPGRIP1', 'WT1', 'TNFRSF9', 'PCAT18', 'STRC', 'SLC18A2', 'INSM1', 'NOXO1', 'CNNM1', 'GPR174', 'PCK1', 'MARCO', 'GPX2', 'FOXD4', 'SLC25A53', 'PPP4R4', 'DMRT3', 'C17ORF104', 'IL20', 'LBP', 'CRISP3', 'KLHL14', 'FOXD1', 'NOS2', 'PKNOX2', 'INHA', 'COL23A1', 'TNFRSF17', 'BTLA', 'AVPR2', 'ADH1C', 'GPLD1', 'PARP15', 'CXCL2', 'MYBPC1', 'GLOD5', 'CST9', 'GPR55', 'SLCO4C1', 'PFN1P2', 'BCL2L14', 'STEAP1B', 'C2ORF40', 'SLC23A1', 'ULBP2', 'VSIG2', 'SCN3A', 'AMH', 'VAT1L', 'CXCR2P1', 'ZNF98', 'DHRS4L1', 'CYSLTR2', 'ZNF454', 'RNF212', 'HAP1', 'TPSG1', 'VGLL1', 'FAM178B', 'FAM218A', 'P2RX1', 'ORM1', 'DBIL5P', 'TMEM105', 'DKK1', 'SYN2', 'EMILIN3', 'ZNF488', 'IL23A', 'SIGLEC17P', 'CRYM', 'AMBP', 'DPY19L2P2', 'PRKG2', 'CXCL1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'CTCFL', 'LRRC2', 'FABP7', 'GPBAR1', 'BRINP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'BDKRB1', 'XIRP1', 'TENM1', 'FUT6', 'LINC00930', 'RERGL', 'BMPER', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'RDM1', 'CECR2', 'CLEC12A', 'HCG27', 'ABHD11.AS1', 'FAM184B', 'PKD1L1', 'PCDHGA3', 'SORCS1', 'SEC14L5', 'WSCD2', 'SSUH2', 'CBLN2', 'ECEL1', 'SPESP1', 'FSCN2', 'CCL17', 'DMRT2', 'ZNF732', 'FAM162B', 'GRIA3', 'TMEM217', 'RSPO1', 'GNB3', 'CTSG', 'RGS6', 'HOXD4', 'PIANP', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'RNF175', 'IL1R2', 'ADAMTS19', 'SERPINA6', 'MT1A', 'RASL10A', 'DIRC3', 'PRSS21', 'HECTD2.AS1', 'PFKFB1', 'POM121L9P', 'CYP46A1', 'LRRC16B', 'SMIM5', 'CAPN11', 'FOXC2', 'ZNF804A', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'VIPR2', 'CYSRT1', 'GPR87', 'IGF2BP3', 'XKR9', 'EMX1', 'SLC26A10', 'HOGA1', 'CA9', 'CEP83.AS1', 'HS3ST3B1', 'SLC13A2', 'HTR7', 'WIPF3', 'ULBP1', 'ZSCAN1', 'ZBTB16', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CYP26A1', 'CITED1', 'ROPN1L', 'MAPT.IT1', 'ANKK1', 'WFDC3', 'GZMM', 'M1AP', 'PVALB', 'FIRRE', 'CDHR1', 'MYO3B', 'IGSF22', 'MRAP2', 'SPAG17', 'INE2', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'CRTAC1', 'MROH7', 'PYGM', 'BTC', 'PCDHA12', 'CFAP61', 'KCNT2', 'HEATR4', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'CLEC4E', 'MIA', 'OPCML', 'ADGRF1', 'LRRC4B', 'NWD1', 'SRSF12', 'B3GAT1', 'CCBE1', 'CIDEC', 'HPDL', 'LINC00173', 'TMEM59L', 'IL11', 'LSAMP', 'RNF182', 'TSPAN8', 'GAS2', 'FASLG', 'KCNA6', 'LOC613037', 'KLK6', 'GALNT13', 'ABCC6P2', 'DHDH', 'NLRP7', 'SMC1B', 'FRMPD1', 'SCN3B', 'RFPL1S', 'C15ORF56', 'COL28A1', 'FAM83A', 'SLC16A11', 'PSORS1C1', 'PTCHD1', 'SLC24A5', 'TUSC5', 'C9ORF47', 'ADGRG2', 'ANO5', 'SLC6A14', 'TMPRSS4', 'RUFY4', 'INTS4P2', 'IGSF1', 'KCNQ3', 'PIK3C2G', 'LOC100133669', 'CYP4F12', 'LINC00908', 'NBPF4', 'MYOM2', 'EBF2', 'VENTX', 'FAM157A', 'DSCAML1', 'PCDHA5', 'PTPRN', 'MAG', 'PLAC1', 'DLX5', 'CCNI2', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'CNTN2', 'FAM19A2', 'KLK7', 'ZBTB20', 'NKX3.2', 'SFTPA2', 'BRE.AS1', 'SLC6A17', 'OR2W3', 'PTPRR', 'RYR3', 'GHRLOS', 'ABCC2', 'TFAP2E', 'ABCD2', 'CD160', 'CD1A', 'GRIA2', 'RGS9', 'CCDC144A', 'DEFB1', 'CDKL2', 'DCX', 'DLK2', 'CACNA1I', 'PWAR5', 'GGT3P', 'MYO16', 'SLC6A11', 'WDR17', 'MSMB', 'CHRFAM7A', 'BTBD19', 'MMP12', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'AGBL4', 'SLC39A2', 'LY6H', 'XCL2', 'SPAG8', 'TUBAL3', 'S100A7', 'P2RY12', 'PCBP3', 'SNORD116.4', 'KCNH3', 'LINC00202.1', 'ZNF727', 'ARL9', 'TM6SF2', 'MAK', 'GRID2IP', 'MPL', 'HRCT1', 'TCN1', 'ELOVL3', 'SLC46A2', 'SYCE3', 'CD70', 'TCTEX1D1', 'NOX5', 'GPM6A', 'GRIN2A', 'PGLYRP2', 'TIGD4', 'SYCE2', 'ARMC3', 'JAKMIP1', 'RAB9B', 'MKRN3', 'CTAGE6', 'BAIAP2L2', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'LONRF3', 'AGAP7P', 'ACY3', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'KLK10', 'SCN9A', 'ACHE', 'AKR1E2', 'SCN2A', 'PRPH2', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'HRC', 'GPR82', 'PAH', 'LOC285593', 'CHODL', 'TTBK1', 'CXADRP3', 'MLLT4.AS1', 'TTYH1', 'CHST9', 'ADGRL3', 'APOBEC3A', 'GABRB3', 'SLC25A34', 'HIST1H2BH', 'TRH', 'BRSK2', 'MAPK4', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'DGCR5', 'CAMK4', 'EPYC', 'MUC15', 'GBP6', 'GPR63', 'ANKLE1', 'CAPSL', 'IL17D', 'ROBO2', 'SLC35F3', 'AIM1L', 'ASGR1', 'HAMP', 'TNFSF11', 'RMRP', 'FAM201A', 'PCDHA1', 'MYO15A', 'FAM159A', 'CHKB.AS1', 'DUSP9', 'NMU', 'PTX3', 'DCLK3', 'NEK5', 'RHCE', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'LOC100132215', 'RUNDC3A', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'LINC00961', 'CYP2E1', 'RRN3P1', 'FOLR1', 'PNMA6A', 'ROPN1B', 'SIGLEC6', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'ADRA2B', 'THSD7B', 'SLC2A14', 'ATP13A4', 'MT1L', 'DPEP1', 'KISS1R', 'KIF19', 'TMEM150B', 'IL1RL1', 'ZMAT4', 'CCR10', 'IL24', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'LIN7A', 'TTLL9', 'WBP2NL', 'RHBG', 'A2ML1', 'PRRT4', 'KIAA1210', 'NIPAL4', 'GPR135', 'LOC90246', 'GNMT', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'FIGF', 'OXGR1', 'CBLN1', 'B3GALT5', 'PCDHB18P', 'RRAD', 'MAP7D2', 'DPF3', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'SLC5A8', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PON3', 'PCDH20', 'GABRB2', 'MASP2', 'TIFAB', 'PHKG1', 'DNAH11', 'KLK8', 'FOXN1', 'WFIKKN1', 'CD19', 'CLCA2', 'DCST2', 'ANK1', 'LINC00669', 'WNT10A', 'GPR171', 'FREM2', 'KCNB1', 'CRB2', 'C19ORF45', 'SLC26A3', 'UCA1', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'RASAL1', 'LINC00685', 'TYMSOS', 'RIC3', 'ANO2', 'CD1E', 'TTC41P', 'COLCA1', 'NEURL3', 'LOC646999', 'CST2', 'MED12L', 'HNRNPCL3', 'PCDHGC5', 'NRXN1', 'RAB3B', 'STXBP6', 'FAM182B', 'MYEOV', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'EYA1', 'ARHGEF33', 'CLPSL1', 'CR2', 'KIF4B', 'FNDC8', 'CXCR2', 'PATL2', 'AJAP1', 'ZNF676', 'VSTM2A', 'CLDN14', 'KCNRG', 'TDRD9', 'CLEC4F', 'LPAR4', 'MSLN', 'C9ORF117', 'MAGEL2', 'FAM43B', 'HAPLN1', 'NDP', 'VIT', 'PDCD1', 'DMRTC1B', 'TRABD2A', 'ABHD1', 'MKX', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.151627095174617e-15 NRMSE: 7.574205948509055e-16 MAPE: 1.1355356818294343e-11 Pearson Correlation: 0.213212165768622 Spearman Correlation: 0.25383109515081237 Coefficient of Determination: -1.1063403726447052 RMSE: 0.6247198574280721 NRMSE: 0.23295752209542195 MAPE: 1363.2620538075867 Predictor: ElasticNet Pearson Correlation: 0.8162035634081356 Spearman Correlation: 0.7449402080013519 Coefficient of Determination: 0.6048933547125298 RMSE: 0.28292969801700524 NRMSE: 0.06799560154217862 MAPE: 602.4712726203538 Pearson Correlation: 0.39638679178435793 Spearman Correlation: 0.4138430653748801 Coefficient of Determination: 0.1387358969778002 RMSE: 0.3994746343617513 NRMSE: 0.14896376328425406 MAPE: 638.5195699912244 Predictor: RandomForests Pearson Correlation: 0.48894740388311264 Spearman Correlation: 0.5397435764554679 Coefficient of Determination: 0.2278051530212729 RMSE: 0.3955349082628979 NRMSE: 0.09505765639579378 MAPE: 770.6118716941512 Pearson Correlation: 0.3664038459129452 Spearman Correlation: 0.4476938615194704 Coefficient of Determination: 0.11717119042064406 RMSE: 0.4044448253874385 NRMSE: 0.1508171434384431 MAPE: 386.6439988052067 Protein: CTNNB1 x_train_column_count: 1002 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'LINC01119', 'IQUB', 'CBLN4', 'LINC01341', 'ECT2L', 'SOX8', 'PAX2', 'EYS', 'NKPD1', 'ETV2', 'FXYD1', 'RNF138P1', 'MYCBPAP', 'TEKT3', 'XPNPEP2', 'CCR8', 'PPP1R3G', 'CCIN', 'STKLD1', 'C19ORF18', 'SLC30A8', 'UGT8', 'SLC28A3', 'JPH4', 'PLP1', 'UBE2Q2P1', 'SLC25A18', 'METTL7B', 'HEPACAM2', 'TEX14', 'IDI2.AS1', 'CASQ1', 'LINC00482', 'S100A3', 'ALOXE3', 'GLIS1', 'SGK2', 'NR1I3', 'CCDC36', 'PBX4', 'ZNF843', 'LRIT3', 'WNT2B', 'CACNG1', 'MS4A15', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'LPAR3', 'AOC2', 'TNNI3K', 'BCHE', 'GJB1', 'C9ORF43', 'PITX2', 'FCRL6', 'CCDC151', 'PNCK', 'CKMT2', 'FAM189A1', 'DQX1', 'ABCA17P', 'CACNA1G', 'C1ORF101', 'ENPP6', 'NLRP12', 'C2ORF50', 'ADCYAP1', 'CLDN9', 'FAM90A1', 'SLC6A20', 'IYD', 'SPIB', 'FAM95B1', 'CA3', 'OTOA', 'ZNF835', 'PCDH9', 'C2CD4A', 'C1ORF95', 'RYR2', 'LINC01550', 'ZCCHC18', 'CLEC3A', 'VSIG1', 'AURKC', 'ULBP3', 'CLECL1', 'CCDC158', 'CCDC65', 'IL20RB', 'ARC', 'GSDMC', 'TAS1R3', 'DDX11L2', 'SCN2B', 'TTC16', 'PCSK1N', 'SVOPL', 'ALDH8A1', 'BPIFB2', 'CRYGS', 'MYOZ1', 'COLCA2', 'GSTM1', 'PDE1C', 'KNDC1', 'DUOXA1', 'B3GALT5.AS1', 'PCYT1B', 'IL22RA1', 'LOC148709', 'KLHL4', 'PPP1R36', 'HOXD3', 'TARP', 'FAM57B', 'OR7E91P', 'CAMP', 'LOC90768', 'LOC441455', 'JPH3', 'CPEB1', 'LUZP2', 'FLJ37201', 'IL12RB2', 'RELN', 'FUT7', 'LBX2', 'SCARA5', 'RIMS1', 'PLA2G5', 'GPR18', 'MNX1', 'ZBED3.AS1', 'HIST1H2BN', 'SLC22A18AS', 'HOXB13', 'KCNE1', 'CD177', 'TUBB8', 'ZC3H12D', 'IGSF5', 'ASTN1', 'CIDEA', 'TCHH', 'KCNE2', 'ONECUT2', 'IRX4', 'C10ORF128', 'GAL', 'WDR72', 'CHRNA6', 'SP5', 'BTBD8', 'FAM135B', 'SLC16A10', 'SCN7A', 'MGC16142', 'HOXB8', 'SCART1', 'LINC01124', 'RSPH4A', 'CCDC183', 'ALB', 'YPEL4', 'GBP1P1', 'CCDC7', 'DCSTAMP', 'GRIN2C', 'CELF5', 'MGAT5B', 'CXXC4', 'SLC35F1', 'GPR3', 'CXCR5', 'HOXA11', 'PYDC1', 'CCDC153', 'OBP2B', 'SLC30A2', 'ATP13A5', 'NIPAL1', 'SKIDA1', 'SRL', 'FOXJ1', 'PCSK9', 'LRP1B', 'RPGRIP1', 'WT1', 'TNFRSF9', 'PCAT18', 'STRC', 'SLC18A2', 'INSM1', 'NOXO1', 'CNNM1', 'GPR174', 'PCK1', 'MARCO', 'GPX2', 'FOXD4', 'SLC25A53', 'PPP4R4', 'DMRT3', 'C17ORF104', 'IL20', 'LBP', 'CRISP3', 'KLHL14', 'FOXD1', 'NOS2', 'PKNOX2', 'INHA', 'COL23A1', 'TNFRSF17', 'BTLA', 'AVPR2', 'ADH1C', 'GPLD1', 'PARP15', 'CXCL2', 'MYBPC1', 'GLOD5', 'CST9', 'GPR55', 'SLCO4C1', 'PFN1P2', 'BCL2L14', 'STEAP1B', 'C2ORF40', 'SLC23A1', 'ULBP2', 'VSIG2', 'SCN3A', 'AMH', 'VAT1L', 'CXCR2P1', 'ZNF98', 'DHRS4L1', 'CYSLTR2', 'ZNF454', 'RNF212', 'HAP1', 'TPSG1', 'VGLL1', 'FAM178B', 'FAM218A', 'P2RX1', 'ORM1', 'DBIL5P', 'TMEM105', 'DKK1', 'SYN2', 'EMILIN3', 'ZNF488', 'IL23A', 'SIGLEC17P', 'CRYM', 'AMBP', 'DPY19L2P2', 'PRKG2', 'CXCL1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'CTCFL', 'LRRC2', 'FABP7', 'GPBAR1', 'BRINP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'BDKRB1', 'XIRP1', 'TENM1', 'FUT6', 'LINC00930', 'RERGL', 'BMPER', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'RDM1', 'CECR2', 'CLEC12A', 'HCG27', 'ABHD11.AS1', 'FAM184B', 'PKD1L1', 'PCDHGA3', 'SORCS1', 'SEC14L5', 'WSCD2', 'SSUH2', 'CBLN2', 'ECEL1', 'SPESP1', 'FSCN2', 'CCL17', 'DMRT2', 'ZNF732', 'FAM162B', 'GRIA3', 'TMEM217', 'RSPO1', 'GNB3', 'CTSG', 'RGS6', 'HOXD4', 'PIANP', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'RNF175', 'IL1R2', 'ADAMTS19', 'SERPINA6', 'MT1A', 'RASL10A', 'DIRC3', 'PRSS21', 'HECTD2.AS1', 'PFKFB1', 'POM121L9P', 'CYP46A1', 'LRRC16B', 'SMIM5', 'CAPN11', 'FOXC2', 'ZNF804A', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'VIPR2', 'CYSRT1', 'GPR87', 'IGF2BP3', 'XKR9', 'EMX1', 'SLC26A10', 'HOGA1', 'CA9', 'CEP83.AS1', 'HS3ST3B1', 'SLC13A2', 'HTR7', 'WIPF3', 'ULBP1', 'ZSCAN1', 'ZBTB16', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CYP26A1', 'CITED1', 'ROPN1L', 'MAPT.IT1', 'ANKK1', 'WFDC3', 'GZMM', 'M1AP', 'PVALB', 'FIRRE', 'CDHR1', 'MYO3B', 'IGSF22', 'MRAP2', 'SPAG17', 'INE2', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'CRTAC1', 'MROH7', 'PYGM', 'BTC', 'PCDHA12', 'CFAP61', 'KCNT2', 'HEATR4', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'CLEC4E', 'MIA', 'OPCML', 'ADGRF1', 'LRRC4B', 'NWD1', 'SRSF12', 'B3GAT1', 'CCBE1', 'CIDEC', 'HPDL', 'LINC00173', 'TMEM59L', 'IL11', 'LSAMP', 'RNF182', 'TSPAN8', 'GAS2', 'FASLG', 'KCNA6', 'LOC613037', 'KLK6', 'GALNT13', 'ABCC6P2', 'DHDH', 'NLRP7', 'SMC1B', 'FRMPD1', 'SCN3B', 'RFPL1S', 'C15ORF56', 'COL28A1', 'FAM83A', 'SLC16A11', 'PSORS1C1', 'PTCHD1', 'SLC24A5', 'TUSC5', 'C9ORF47', 'ADGRG2', 'ANO5', 'SLC6A14', 'TMPRSS4', 'RUFY4', 'INTS4P2', 'IGSF1', 'KCNQ3', 'PIK3C2G', 'LOC100133669', 'CYP4F12', 'LINC00908', 'NBPF4', 'MYOM2', 'EBF2', 'VENTX', 'FAM157A', 'DSCAML1', 'PCDHA5', 'PTPRN', 'MAG', 'PLAC1', 'DLX5', 'CCNI2', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'CNTN2', 'FAM19A2', 'KLK7', 'ZBTB20', 'NKX3.2', 'SFTPA2', 'BRE.AS1', 'SLC6A17', 'OR2W3', 'PTPRR', 'RYR3', 'GHRLOS', 'ABCC2', 'TFAP2E', 'ABCD2', 'CD160', 'CD1A', 'GRIA2', 'RGS9', 'CCDC144A', 'DEFB1', 'CDKL2', 'DCX', 'DLK2', 'CACNA1I', 'PWAR5', 'GGT3P', 'MYO16', 'SLC6A11', 'WDR17', 'MSMB', 'CHRFAM7A', 'BTBD19', 'MMP12', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'AGBL4', 'SLC39A2', 'LY6H', 'XCL2', 'SPAG8', 'TUBAL3', 'S100A7', 'P2RY12', 'PCBP3', 'SNORD116.4', 'KCNH3', 'LINC00202.1', 'ZNF727', 'ARL9', 'TM6SF2', 'MAK', 'GRID2IP', 'MPL', 'HRCT1', 'TCN1', 'ELOVL3', 'SLC46A2', 'SYCE3', 'CD70', 'TCTEX1D1', 'NOX5', 'GPM6A', 'GRIN2A', 'PGLYRP2', 'TIGD4', 'SYCE2', 'ARMC3', 'JAKMIP1', 'RAB9B', 'MKRN3', 'CTAGE6', 'BAIAP2L2', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'LONRF3', 'AGAP7P', 'ACY3', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'KLK10', 'SCN9A', 'ACHE', 'AKR1E2', 'SCN2A', 'PRPH2', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'HRC', 'GPR82', 'PAH', 'LOC285593', 'CHODL', 'TTBK1', 'CXADRP3', 'MLLT4.AS1', 'TTYH1', 'CHST9', 'ADGRL3', 'APOBEC3A', 'GABRB3', 'SLC25A34', 'HIST1H2BH', 'TRH', 'BRSK2', 'MAPK4', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'DGCR5', 'CAMK4', 'EPYC', 'MUC15', 'GBP6', 'GPR63', 'ANKLE1', 'CAPSL', 'IL17D', 'ROBO2', 'SLC35F3', 'AIM1L', 'ASGR1', 'HAMP', 'TNFSF11', 'RMRP', 'FAM201A', 'PCDHA1', 'MYO15A', 'FAM159A', 'CHKB.AS1', 'DUSP9', 'NMU', 'PTX3', 'DCLK3', 'NEK5', 'RHCE', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'LOC100132215', 'RUNDC3A', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'LINC00961', 'CYP2E1', 'RRN3P1', 'FOLR1', 'PNMA6A', 'ROPN1B', 'SIGLEC6', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'ADRA2B', 'THSD7B', 'SLC2A14', 'ATP13A4', 'MT1L', 'DPEP1', 'KISS1R', 'KIF19', 'TMEM150B', 'IL1RL1', 'ZMAT4', 'CCR10', 'IL24', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'LIN7A', 'TTLL9', 'WBP2NL', 'RHBG', 'A2ML1', 'PRRT4', 'KIAA1210', 'NIPAL4', 'GPR135', 'LOC90246', 'GNMT', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'FIGF', 'OXGR1', 'CBLN1', 'B3GALT5', 'PCDHB18P', 'RRAD', 'MAP7D2', 'DPF3', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'SLC5A8', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PON3', 'PCDH20', 'GABRB2', 'MASP2', 'TIFAB', 'PHKG1', 'DNAH11', 'KLK8', 'FOXN1', 'WFIKKN1', 'CD19', 'CLCA2', 'DCST2', 'ANK1', 'LINC00669', 'WNT10A', 'GPR171', 'FREM2', 'KCNB1', 'CRB2', 'C19ORF45', 'SLC26A3', 'UCA1', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'RASAL1', 'LINC00685', 'TYMSOS', 'RIC3', 'ANO2', 'CD1E', 'TTC41P', 'COLCA1', 'NEURL3', 'LOC646999', 'CST2', 'MED12L', 'HNRNPCL3', 'PCDHGC5', 'NRXN1', 'RAB3B', 'STXBP6', 'FAM182B', 'MYEOV', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'EYA1', 'ARHGEF33', 'CLPSL1', 'CR2', 'KIF4B', 'FNDC8', 'CXCR2', 'PATL2', 'AJAP1', 'ZNF676', 'VSTM2A', 'CLDN14', 'KCNRG', 'TDRD9', 'CLEC4F', 'LPAR4', 'MSLN', 'C9ORF117', 'MAGEL2', 'FAM43B', 'HAPLN1', 'NDP', 'VIT', 'PDCD1', 'DMRTC1B', 'TRABD2A', 'ABHD1', 'MKX', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.9999999999999996 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.677640671979351e-15 NRMSE: 7.233754272185978e-16 MAPE: 3.1055074581707426e-12 Pearson Correlation: 0.17948147047080623 Spearman Correlation: 0.16956071771468473 Coefficient of Determination: -1.2136577646702387 RMSE: 0.9119997564901284 NRMSE: 0.2981463128870275 MAPE: 2879.8081531228463 Predictor: ElasticNet Pearson Correlation: 0.8938630306141662 Spearman Correlation: 0.8843623422113527 Coefficient of Determination: 0.7511130724585171 RMSE: 0.3837415925548305 NRMSE: 0.0754802503058282 MAPE: 212.12654665810228 Pearson Correlation: 0.2117276442795059 Spearman Correlation: 0.2022194790458734 Coefficient of Determination: -0.23441710332950771 RMSE: 0.6810365934581964 NRMSE: 0.22264101260524907 MAPE: 1669.1454716547962 Predictor: RandomForests Pearson Correlation: 0.5357445011351625 Spearman Correlation: 0.5591464975593943 Coefficient of Determination: 0.25139494736117696 RMSE: 0.665524744475016 NRMSE: 0.13090573258753266 MAPE: 295.65791814843647 Pearson Correlation: 0.15579296178889468 Spearman Correlation: 0.1692215613661018 Coefficient of Determination: -0.0685911036136928 RMSE: 0.6336439023558794 NRMSE: 0.20714763554084126 MAPE: 1956.3145119940637 Protein: CCNE1 x_train_column_count: 1002 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'LINC01119', 'IQUB', 'CBLN4', 'LINC01341', 'ECT2L', 'SOX8', 'PAX2', 'EYS', 'NKPD1', 'ETV2', 'FXYD1', 'RNF138P1', 'MYCBPAP', 'TEKT3', 'XPNPEP2', 'CCR8', 'PPP1R3G', 'CCIN', 'STKLD1', 'C19ORF18', 'SLC30A8', 'UGT8', 'SLC28A3', 'JPH4', 'PLP1', 'UBE2Q2P1', 'SLC25A18', 'METTL7B', 'HEPACAM2', 'TEX14', 'IDI2.AS1', 'CASQ1', 'LINC00482', 'S100A3', 'ALOXE3', 'GLIS1', 'SGK2', 'NR1I3', 'CCDC36', 'PBX4', 'ZNF843', 'LRIT3', 'WNT2B', 'CACNG1', 'MS4A15', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'LPAR3', 'AOC2', 'TNNI3K', 'BCHE', 'GJB1', 'C9ORF43', 'PITX2', 'FCRL6', 'CCDC151', 'PNCK', 'CKMT2', 'FAM189A1', 'DQX1', 'ABCA17P', 'CACNA1G', 'C1ORF101', 'ENPP6', 'NLRP12', 'C2ORF50', 'ADCYAP1', 'CLDN9', 'FAM90A1', 'SLC6A20', 'IYD', 'SPIB', 'FAM95B1', 'CA3', 'OTOA', 'ZNF835', 'PCDH9', 'C2CD4A', 'C1ORF95', 'RYR2', 'LINC01550', 'ZCCHC18', 'CLEC3A', 'VSIG1', 'AURKC', 'ULBP3', 'CLECL1', 'CCDC158', 'CCDC65', 'IL20RB', 'ARC', 'GSDMC', 'TAS1R3', 'DDX11L2', 'SCN2B', 'TTC16', 'PCSK1N', 'SVOPL', 'ALDH8A1', 'BPIFB2', 'CRYGS', 'MYOZ1', 'COLCA2', 'GSTM1', 'PDE1C', 'KNDC1', 'DUOXA1', 'B3GALT5.AS1', 'PCYT1B', 'IL22RA1', 'LOC148709', 'KLHL4', 'PPP1R36', 'HOXD3', 'TARP', 'FAM57B', 'OR7E91P', 'CAMP', 'LOC90768', 'LOC441455', 'JPH3', 'CPEB1', 'LUZP2', 'FLJ37201', 'IL12RB2', 'RELN', 'FUT7', 'LBX2', 'SCARA5', 'RIMS1', 'PLA2G5', 'GPR18', 'MNX1', 'ZBED3.AS1', 'HIST1H2BN', 'SLC22A18AS', 'HOXB13', 'KCNE1', 'CD177', 'TUBB8', 'ZC3H12D', 'IGSF5', 'ASTN1', 'CIDEA', 'TCHH', 'KCNE2', 'ONECUT2', 'IRX4', 'C10ORF128', 'GAL', 'WDR72', 'CHRNA6', 'SP5', 'BTBD8', 'FAM135B', 'SLC16A10', 'SCN7A', 'MGC16142', 'HOXB8', 'SCART1', 'LINC01124', 'RSPH4A', 'CCDC183', 'ALB', 'YPEL4', 'GBP1P1', 'CCDC7', 'DCSTAMP', 'GRIN2C', 'CELF5', 'MGAT5B', 'CXXC4', 'SLC35F1', 'GPR3', 'CXCR5', 'HOXA11', 'PYDC1', 'CCDC153', 'OBP2B', 'SLC30A2', 'ATP13A5', 'NIPAL1', 'SKIDA1', 'SRL', 'FOXJ1', 'PCSK9', 'LRP1B', 'RPGRIP1', 'WT1', 'TNFRSF9', 'PCAT18', 'STRC', 'SLC18A2', 'INSM1', 'NOXO1', 'CNNM1', 'GPR174', 'PCK1', 'MARCO', 'GPX2', 'FOXD4', 'SLC25A53', 'PPP4R4', 'DMRT3', 'C17ORF104', 'IL20', 'LBP', 'CRISP3', 'KLHL14', 'FOXD1', 'NOS2', 'PKNOX2', 'INHA', 'COL23A1', 'TNFRSF17', 'BTLA', 'AVPR2', 'ADH1C', 'GPLD1', 'PARP15', 'CXCL2', 'MYBPC1', 'GLOD5', 'CST9', 'GPR55', 'SLCO4C1', 'PFN1P2', 'BCL2L14', 'STEAP1B', 'C2ORF40', 'SLC23A1', 'ULBP2', 'VSIG2', 'SCN3A', 'AMH', 'VAT1L', 'CXCR2P1', 'ZNF98', 'DHRS4L1', 'CYSLTR2', 'ZNF454', 'RNF212', 'HAP1', 'TPSG1', 'VGLL1', 'FAM178B', 'FAM218A', 'P2RX1', 'ORM1', 'DBIL5P', 'TMEM105', 'DKK1', 'SYN2', 'EMILIN3', 'ZNF488', 'IL23A', 'SIGLEC17P', 'CRYM', 'AMBP', 'DPY19L2P2', 'PRKG2', 'CXCL1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'CTCFL', 'LRRC2', 'FABP7', 'GPBAR1', 'BRINP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'BDKRB1', 'XIRP1', 'TENM1', 'FUT6', 'LINC00930', 'RERGL', 'BMPER', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'RDM1', 'CECR2', 'CLEC12A', 'HCG27', 'ABHD11.AS1', 'FAM184B', 'PKD1L1', 'PCDHGA3', 'SORCS1', 'SEC14L5', 'WSCD2', 'SSUH2', 'CBLN2', 'ECEL1', 'SPESP1', 'FSCN2', 'CCL17', 'DMRT2', 'ZNF732', 'FAM162B', 'GRIA3', 'TMEM217', 'RSPO1', 'GNB3', 'CTSG', 'RGS6', 'HOXD4', 'PIANP', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'RNF175', 'IL1R2', 'ADAMTS19', 'SERPINA6', 'MT1A', 'RASL10A', 'DIRC3', 'PRSS21', 'HECTD2.AS1', 'PFKFB1', 'POM121L9P', 'CYP46A1', 'LRRC16B', 'SMIM5', 'CAPN11', 'FOXC2', 'ZNF804A', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'VIPR2', 'CYSRT1', 'GPR87', 'IGF2BP3', 'XKR9', 'EMX1', 'SLC26A10', 'HOGA1', 'CA9', 'CEP83.AS1', 'HS3ST3B1', 'SLC13A2', 'HTR7', 'WIPF3', 'ULBP1', 'ZSCAN1', 'ZBTB16', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CYP26A1', 'CITED1', 'ROPN1L', 'MAPT.IT1', 'ANKK1', 'WFDC3', 'GZMM', 'M1AP', 'PVALB', 'FIRRE', 'CDHR1', 'MYO3B', 'IGSF22', 'MRAP2', 'SPAG17', 'INE2', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'CRTAC1', 'MROH7', 'PYGM', 'BTC', 'PCDHA12', 'CFAP61', 'KCNT2', 'HEATR4', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'CLEC4E', 'MIA', 'OPCML', 'ADGRF1', 'LRRC4B', 'NWD1', 'SRSF12', 'B3GAT1', 'CCBE1', 'CIDEC', 'HPDL', 'LINC00173', 'TMEM59L', 'IL11', 'LSAMP', 'RNF182', 'TSPAN8', 'GAS2', 'FASLG', 'KCNA6', 'LOC613037', 'KLK6', 'GALNT13', 'ABCC6P2', 'DHDH', 'NLRP7', 'SMC1B', 'FRMPD1', 'SCN3B', 'RFPL1S', 'C15ORF56', 'COL28A1', 'FAM83A', 'SLC16A11', 'PSORS1C1', 'PTCHD1', 'SLC24A5', 'TUSC5', 'C9ORF47', 'ADGRG2', 'ANO5', 'SLC6A14', 'TMPRSS4', 'RUFY4', 'INTS4P2', 'IGSF1', 'KCNQ3', 'PIK3C2G', 'LOC100133669', 'CYP4F12', 'LINC00908', 'NBPF4', 'MYOM2', 'EBF2', 'VENTX', 'FAM157A', 'DSCAML1', 'PCDHA5', 'PTPRN', 'MAG', 'PLAC1', 'DLX5', 'CCNI2', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'CNTN2', 'FAM19A2', 'KLK7', 'ZBTB20', 'NKX3.2', 'SFTPA2', 'BRE.AS1', 'SLC6A17', 'OR2W3', 'PTPRR', 'RYR3', 'GHRLOS', 'ABCC2', 'TFAP2E', 'ABCD2', 'CD160', 'CD1A', 'GRIA2', 'RGS9', 'CCDC144A', 'DEFB1', 'CDKL2', 'DCX', 'DLK2', 'CACNA1I', 'PWAR5', 'GGT3P', 'MYO16', 'SLC6A11', 'WDR17', 'MSMB', 'CHRFAM7A', 'BTBD19', 'MMP12', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'AGBL4', 'SLC39A2', 'LY6H', 'XCL2', 'SPAG8', 'TUBAL3', 'S100A7', 'P2RY12', 'PCBP3', 'SNORD116.4', 'KCNH3', 'LINC00202.1', 'ZNF727', 'ARL9', 'TM6SF2', 'MAK', 'GRID2IP', 'MPL', 'HRCT1', 'TCN1', 'ELOVL3', 'SLC46A2', 'SYCE3', 'CD70', 'TCTEX1D1', 'NOX5', 'GPM6A', 'GRIN2A', 'PGLYRP2', 'TIGD4', 'SYCE2', 'ARMC3', 'JAKMIP1', 'RAB9B', 'MKRN3', 'CTAGE6', 'BAIAP2L2', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'LONRF3', 'AGAP7P', 'ACY3', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'KLK10', 'SCN9A', 'ACHE', 'AKR1E2', 'SCN2A', 'PRPH2', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'HRC', 'GPR82', 'PAH', 'LOC285593', 'CHODL', 'TTBK1', 'CXADRP3', 'MLLT4.AS1', 'TTYH1', 'CHST9', 'ADGRL3', 'APOBEC3A', 'GABRB3', 'SLC25A34', 'HIST1H2BH', 'TRH', 'BRSK2', 'MAPK4', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'DGCR5', 'CAMK4', 'EPYC', 'MUC15', 'GBP6', 'GPR63', 'ANKLE1', 'CAPSL', 'IL17D', 'ROBO2', 'SLC35F3', 'AIM1L', 'ASGR1', 'HAMP', 'TNFSF11', 'RMRP', 'FAM201A', 'PCDHA1', 'MYO15A', 'FAM159A', 'CHKB.AS1', 'DUSP9', 'NMU', 'PTX3', 'DCLK3', 'NEK5', 'RHCE', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'LOC100132215', 'RUNDC3A', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'LINC00961', 'CYP2E1', 'RRN3P1', 'FOLR1', 'PNMA6A', 'ROPN1B', 'SIGLEC6', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'ADRA2B', 'THSD7B', 'SLC2A14', 'ATP13A4', 'MT1L', 'DPEP1', 'KISS1R', 'KIF19', 'TMEM150B', 'IL1RL1', 'ZMAT4', 'CCR10', 'IL24', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'LIN7A', 'TTLL9', 'WBP2NL', 'RHBG', 'A2ML1', 'PRRT4', 'KIAA1210', 'NIPAL4', 'GPR135', 'LOC90246', 'GNMT', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'FIGF', 'OXGR1', 'CBLN1', 'B3GALT5', 'PCDHB18P', 'RRAD', 'MAP7D2', 'DPF3', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'SLC5A8', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PON3', 'PCDH20', 'GABRB2', 'MASP2', 'TIFAB', 'PHKG1', 'DNAH11', 'KLK8', 'FOXN1', 'WFIKKN1', 'CD19', 'CLCA2', 'DCST2', 'ANK1', 'LINC00669', 'WNT10A', 'GPR171', 'FREM2', 'KCNB1', 'CRB2', 'C19ORF45', 'SLC26A3', 'UCA1', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'RASAL1', 'LINC00685', 'TYMSOS', 'RIC3', 'ANO2', 'CD1E', 'TTC41P', 'COLCA1', 'NEURL3', 'LOC646999', 'CST2', 'MED12L', 'HNRNPCL3', 'PCDHGC5', 'NRXN1', 'RAB3B', 'STXBP6', 'FAM182B', 'MYEOV', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'EYA1', 'ARHGEF33', 'CLPSL1', 'CR2', 'KIF4B', 'FNDC8', 'CXCR2', 'PATL2', 'AJAP1', 'ZNF676', 'VSTM2A', 'CLDN14', 'KCNRG', 'TDRD9', 'CLEC4F', 'LPAR4', 'MSLN', 'C9ORF117', 'MAGEL2', 'FAM43B', 'HAPLN1', 'NDP', 'VIT', 'PDCD1', 'DMRTC1B', 'TRABD2A', 'ABHD1', 'MKX', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.9999999999999996 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 2.3471661517676706e-15 NRMSE: 5.664421053087025e-16 MAPE: 3.9378178063633496e-13 Pearson Correlation: 0.3863266325105797 Spearman Correlation: 0.3193481215476502 Coefficient of Determination: -0.9870585870661397 RMSE: 0.5143582023658203 NRMSE: 0.2240528825046044 MAPE: 139.067272248509 Predictor: ElasticNet Pearson Correlation: 0.8739756763051225 Spearman Correlation: 0.7781306090339613 Coefficient of Determination: 0.7399307363962231 RMSE: 0.26641997711386717 NRMSE: 0.06429518959236122 MAPE: 48.03165197861183 Pearson Correlation: 0.5511298330434323 Spearman Correlation: 0.46869162957144106 Coefficient of Determination: 0.12006615162803957 RMSE: 0.34228301258053984 NRMSE: 0.14909744852573936 MAPE: 92.72570327524815 Predictor: RandomForests Pearson Correlation: 0.6814263235639568 Spearman Correlation: 0.6155975592781483 Coefficient of Determination: 0.4272033507163616 RMSE: 0.3953871102629947 NRMSE: 0.09541885519294223 MAPE: 66.24793734295477 Pearson Correlation: 0.49642301275480044 Spearman Correlation: 0.46117033878227914 Coefficient of Determination: 0.21466786977800822 RMSE: 0.3233605365378807 NRMSE: 0.14085487500016583 MAPE: 96.27906486707306 Protein: CCND1 x_train_column_count: 1002 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'LINC01119', 'IQUB', 'CBLN4', 'LINC01341', 'ECT2L', 'SOX8', 'PAX2', 'EYS', 'NKPD1', 'ETV2', 'FXYD1', 'RNF138P1', 'MYCBPAP', 'TEKT3', 'XPNPEP2', 'CCR8', 'PPP1R3G', 'CCIN', 'STKLD1', 'C19ORF18', 'SLC30A8', 'UGT8', 'SLC28A3', 'JPH4', 'PLP1', 'UBE2Q2P1', 'SLC25A18', 'METTL7B', 'HEPACAM2', 'TEX14', 'IDI2.AS1', 'CASQ1', 'LINC00482', 'S100A3', 'ALOXE3', 'GLIS1', 'SGK2', 'NR1I3', 'CCDC36', 'PBX4', 'ZNF843', 'LRIT3', 'WNT2B', 'CACNG1', 'MS4A15', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'LPAR3', 'AOC2', 'TNNI3K', 'BCHE', 'GJB1', 'C9ORF43', 'PITX2', 'FCRL6', 'CCDC151', 'PNCK', 'CKMT2', 'FAM189A1', 'DQX1', 'ABCA17P', 'CACNA1G', 'C1ORF101', 'ENPP6', 'NLRP12', 'C2ORF50', 'ADCYAP1', 'CLDN9', 'FAM90A1', 'SLC6A20', 'IYD', 'SPIB', 'FAM95B1', 'CA3', 'OTOA', 'ZNF835', 'PCDH9', 'C2CD4A', 'C1ORF95', 'RYR2', 'LINC01550', 'ZCCHC18', 'CLEC3A', 'VSIG1', 'AURKC', 'ULBP3', 'CLECL1', 'CCDC158', 'CCDC65', 'IL20RB', 'ARC', 'GSDMC', 'TAS1R3', 'DDX11L2', 'SCN2B', 'TTC16', 'PCSK1N', 'SVOPL', 'ALDH8A1', 'BPIFB2', 'CRYGS', 'MYOZ1', 'COLCA2', 'GSTM1', 'PDE1C', 'KNDC1', 'DUOXA1', 'B3GALT5.AS1', 'PCYT1B', 'IL22RA1', 'LOC148709', 'KLHL4', 'PPP1R36', 'HOXD3', 'TARP', 'FAM57B', 'OR7E91P', 'CAMP', 'LOC90768', 'LOC441455', 'JPH3', 'CPEB1', 'LUZP2', 'FLJ37201', 'IL12RB2', 'RELN', 'FUT7', 'LBX2', 'SCARA5', 'RIMS1', 'PLA2G5', 'GPR18', 'MNX1', 'ZBED3.AS1', 'HIST1H2BN', 'SLC22A18AS', 'HOXB13', 'KCNE1', 'CD177', 'TUBB8', 'ZC3H12D', 'IGSF5', 'ASTN1', 'CIDEA', 'TCHH', 'KCNE2', 'ONECUT2', 'IRX4', 'C10ORF128', 'GAL', 'WDR72', 'CHRNA6', 'SP5', 'BTBD8', 'FAM135B', 'SLC16A10', 'SCN7A', 'MGC16142', 'HOXB8', 'SCART1', 'LINC01124', 'RSPH4A', 'CCDC183', 'ALB', 'YPEL4', 'GBP1P1', 'CCDC7', 'DCSTAMP', 'GRIN2C', 'CELF5', 'MGAT5B', 'CXXC4', 'SLC35F1', 'GPR3', 'CXCR5', 'HOXA11', 'PYDC1', 'CCDC153', 'OBP2B', 'SLC30A2', 'ATP13A5', 'NIPAL1', 'SKIDA1', 'SRL', 'FOXJ1', 'PCSK9', 'LRP1B', 'RPGRIP1', 'WT1', 'TNFRSF9', 'PCAT18', 'STRC', 'SLC18A2', 'INSM1', 'NOXO1', 'CNNM1', 'GPR174', 'PCK1', 'MARCO', 'GPX2', 'FOXD4', 'SLC25A53', 'PPP4R4', 'DMRT3', 'C17ORF104', 'IL20', 'LBP', 'CRISP3', 'KLHL14', 'FOXD1', 'NOS2', 'PKNOX2', 'INHA', 'COL23A1', 'TNFRSF17', 'BTLA', 'AVPR2', 'ADH1C', 'GPLD1', 'PARP15', 'CXCL2', 'MYBPC1', 'GLOD5', 'CST9', 'GPR55', 'SLCO4C1', 'PFN1P2', 'BCL2L14', 'STEAP1B', 'C2ORF40', 'SLC23A1', 'ULBP2', 'VSIG2', 'SCN3A', 'AMH', 'VAT1L', 'CXCR2P1', 'ZNF98', 'DHRS4L1', 'CYSLTR2', 'ZNF454', 'RNF212', 'HAP1', 'TPSG1', 'VGLL1', 'FAM178B', 'FAM218A', 'P2RX1', 'ORM1', 'DBIL5P', 'TMEM105', 'DKK1', 'SYN2', 'EMILIN3', 'ZNF488', 'IL23A', 'SIGLEC17P', 'CRYM', 'AMBP', 'DPY19L2P2', 'PRKG2', 'CXCL1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'CTCFL', 'LRRC2', 'FABP7', 'GPBAR1', 'BRINP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'BDKRB1', 'XIRP1', 'TENM1', 'FUT6', 'LINC00930', 'RERGL', 'BMPER', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'RDM1', 'CECR2', 'CLEC12A', 'HCG27', 'ABHD11.AS1', 'FAM184B', 'PKD1L1', 'PCDHGA3', 'SORCS1', 'SEC14L5', 'WSCD2', 'SSUH2', 'CBLN2', 'ECEL1', 'SPESP1', 'FSCN2', 'CCL17', 'DMRT2', 'ZNF732', 'FAM162B', 'GRIA3', 'TMEM217', 'RSPO1', 'GNB3', 'CTSG', 'RGS6', 'HOXD4', 'PIANP', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'RNF175', 'IL1R2', 'ADAMTS19', 'SERPINA6', 'MT1A', 'RASL10A', 'DIRC3', 'PRSS21', 'HECTD2.AS1', 'PFKFB1', 'POM121L9P', 'CYP46A1', 'LRRC16B', 'SMIM5', 'CAPN11', 'FOXC2', 'ZNF804A', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'VIPR2', 'CYSRT1', 'GPR87', 'IGF2BP3', 'XKR9', 'EMX1', 'SLC26A10', 'HOGA1', 'CA9', 'CEP83.AS1', 'HS3ST3B1', 'SLC13A2', 'HTR7', 'WIPF3', 'ULBP1', 'ZSCAN1', 'ZBTB16', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CYP26A1', 'CITED1', 'ROPN1L', 'MAPT.IT1', 'ANKK1', 'WFDC3', 'GZMM', 'M1AP', 'PVALB', 'FIRRE', 'CDHR1', 'MYO3B', 'IGSF22', 'MRAP2', 'SPAG17', 'INE2', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'CRTAC1', 'MROH7', 'PYGM', 'BTC', 'PCDHA12', 'CFAP61', 'KCNT2', 'HEATR4', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'CLEC4E', 'MIA', 'OPCML', 'ADGRF1', 'LRRC4B', 'NWD1', 'SRSF12', 'B3GAT1', 'CCBE1', 'CIDEC', 'HPDL', 'LINC00173', 'TMEM59L', 'IL11', 'LSAMP', 'RNF182', 'TSPAN8', 'GAS2', 'FASLG', 'KCNA6', 'LOC613037', 'KLK6', 'GALNT13', 'ABCC6P2', 'DHDH', 'NLRP7', 'SMC1B', 'FRMPD1', 'SCN3B', 'RFPL1S', 'C15ORF56', 'COL28A1', 'FAM83A', 'SLC16A11', 'PSORS1C1', 'PTCHD1', 'SLC24A5', 'TUSC5', 'C9ORF47', 'ADGRG2', 'ANO5', 'SLC6A14', 'TMPRSS4', 'RUFY4', 'INTS4P2', 'IGSF1', 'KCNQ3', 'PIK3C2G', 'LOC100133669', 'CYP4F12', 'LINC00908', 'NBPF4', 'MYOM2', 'EBF2', 'VENTX', 'FAM157A', 'DSCAML1', 'PCDHA5', 'PTPRN', 'MAG', 'PLAC1', 'DLX5', 'CCNI2', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'CNTN2', 'FAM19A2', 'KLK7', 'ZBTB20', 'NKX3.2', 'SFTPA2', 'BRE.AS1', 'SLC6A17', 'OR2W3', 'PTPRR', 'RYR3', 'GHRLOS', 'ABCC2', 'TFAP2E', 'ABCD2', 'CD160', 'CD1A', 'GRIA2', 'RGS9', 'CCDC144A', 'DEFB1', 'CDKL2', 'DCX', 'DLK2', 'CACNA1I', 'PWAR5', 'GGT3P', 'MYO16', 'SLC6A11', 'WDR17', 'MSMB', 'CHRFAM7A', 'BTBD19', 'MMP12', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'AGBL4', 'SLC39A2', 'LY6H', 'XCL2', 'SPAG8', 'TUBAL3', 'S100A7', 'P2RY12', 'PCBP3', 'SNORD116.4', 'KCNH3', 'LINC00202.1', 'ZNF727', 'ARL9', 'TM6SF2', 'MAK', 'GRID2IP', 'MPL', 'HRCT1', 'TCN1', 'ELOVL3', 'SLC46A2', 'SYCE3', 'CD70', 'TCTEX1D1', 'NOX5', 'GPM6A', 'GRIN2A', 'PGLYRP2', 'TIGD4', 'SYCE2', 'ARMC3', 'JAKMIP1', 'RAB9B', 'MKRN3', 'CTAGE6', 'BAIAP2L2', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'LONRF3', 'AGAP7P', 'ACY3', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'KLK10', 'SCN9A', 'ACHE', 'AKR1E2', 'SCN2A', 'PRPH2', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'HRC', 'GPR82', 'PAH', 'LOC285593', 'CHODL', 'TTBK1', 'CXADRP3', 'MLLT4.AS1', 'TTYH1', 'CHST9', 'ADGRL3', 'APOBEC3A', 'GABRB3', 'SLC25A34', 'HIST1H2BH', 'TRH', 'BRSK2', 'MAPK4', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'DGCR5', 'CAMK4', 'EPYC', 'MUC15', 'GBP6', 'GPR63', 'ANKLE1', 'CAPSL', 'IL17D', 'ROBO2', 'SLC35F3', 'AIM1L', 'ASGR1', 'HAMP', 'TNFSF11', 'RMRP', 'FAM201A', 'PCDHA1', 'MYO15A', 'FAM159A', 'CHKB.AS1', 'DUSP9', 'NMU', 'PTX3', 'DCLK3', 'NEK5', 'RHCE', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'LOC100132215', 'RUNDC3A', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'LINC00961', 'CYP2E1', 'RRN3P1', 'FOLR1', 'PNMA6A', 'ROPN1B', 'SIGLEC6', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'ADRA2B', 'THSD7B', 'SLC2A14', 'ATP13A4', 'MT1L', 'DPEP1', 'KISS1R', 'KIF19', 'TMEM150B', 'IL1RL1', 'ZMAT4', 'CCR10', 'IL24', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'LIN7A', 'TTLL9', 'WBP2NL', 'RHBG', 'A2ML1', 'PRRT4', 'KIAA1210', 'NIPAL4', 'GPR135', 'LOC90246', 'GNMT', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'FIGF', 'OXGR1', 'CBLN1', 'B3GALT5', 'PCDHB18P', 'RRAD', 'MAP7D2', 'DPF3', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'SLC5A8', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PON3', 'PCDH20', 'GABRB2', 'MASP2', 'TIFAB', 'PHKG1', 'DNAH11', 'KLK8', 'FOXN1', 'WFIKKN1', 'CD19', 'CLCA2', 'DCST2', 'ANK1', 'LINC00669', 'WNT10A', 'GPR171', 'FREM2', 'KCNB1', 'CRB2', 'C19ORF45', 'SLC26A3', 'UCA1', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'RASAL1', 'LINC00685', 'TYMSOS', 'RIC3', 'ANO2', 'CD1E', 'TTC41P', 'COLCA1', 'NEURL3', 'LOC646999', 'CST2', 'MED12L', 'HNRNPCL3', 'PCDHGC5', 'NRXN1', 'RAB3B', 'STXBP6', 'FAM182B', 'MYEOV', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'EYA1', 'ARHGEF33', 'CLPSL1', 'CR2', 'KIF4B', 'FNDC8', 'CXCR2', 'PATL2', 'AJAP1', 'ZNF676', 'VSTM2A', 'CLDN14', 'KCNRG', 'TDRD9', 'CLEC4F', 'LPAR4', 'MSLN', 'C9ORF117', 'MAGEL2', 'FAM43B', 'HAPLN1', 'NDP', 'VIT', 'PDCD1', 'DMRTC1B', 'TRABD2A', 'ABHD1', 'MKX', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.580691662393309e-15 NRMSE: 9.502661158296216e-16 MAPE: 7.678714612901215e-12 Pearson Correlation: -0.003791994084135896 Spearman Correlation: -0.005119764585593337 Coefficient of Determination: -1.5697528594287533 RMSE: 0.33622197504704865 NRMSE: 0.31859416016511294 MAPE: 462.20429078121424 Predictor: ElasticNet Pearson Correlation: 0.6251711549444832 Spearman Correlation: 0.6203054757185175 Coefficient of Determination: 0.3132607126206428 RMSE: 0.2027460780605691 NRMSE: 0.12188507897017536 MAPE: 629.9585690767334 Pearson Correlation: 0.17940366598266896 Spearman Correlation: 0.19596004937717432 Coefficient of Determination: 0.004402903618872411 RMSE: 0.20927734965265754 NRMSE: 0.19830512697701905 MAPE: 339.55118682430776 Predictor: RandomForests Pearson Correlation: 0.5205643234098986 Spearman Correlation: 0.5289133247475566 Coefficient of Determination: 0.1698898287858528 RMSE: 0.22290734689758812 NRMSE: 0.1340054507566268 MAPE: 602.4135106961756 Pearson Correlation: 0.17272127903041548 Spearman Correlation: 0.17689746754947072 Coefficient of Determination: 0.02752653063614785 RMSE: 0.20683274555561385 NRMSE: 0.19598869126776822 MAPE: 433.80597998984183 Protein: ERBB2 x_train_column_count: 1002 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'LINC01119', 'IQUB', 'CBLN4', 'LINC01341', 'ECT2L', 'SOX8', 'PAX2', 'EYS', 'NKPD1', 'ETV2', 'FXYD1', 'RNF138P1', 'MYCBPAP', 'TEKT3', 'XPNPEP2', 'CCR8', 'PPP1R3G', 'CCIN', 'STKLD1', 'C19ORF18', 'SLC30A8', 'UGT8', 'SLC28A3', 'JPH4', 'PLP1', 'UBE2Q2P1', 'SLC25A18', 'METTL7B', 'HEPACAM2', 'TEX14', 'IDI2.AS1', 'CASQ1', 'LINC00482', 'S100A3', 'ALOXE3', 'GLIS1', 'SGK2', 'NR1I3', 'CCDC36', 'PBX4', 'ZNF843', 'LRIT3', 'WNT2B', 'CACNG1', 'MS4A15', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'LPAR3', 'AOC2', 'TNNI3K', 'BCHE', 'GJB1', 'C9ORF43', 'PITX2', 'FCRL6', 'CCDC151', 'PNCK', 'CKMT2', 'FAM189A1', 'DQX1', 'ABCA17P', 'CACNA1G', 'C1ORF101', 'ENPP6', 'NLRP12', 'C2ORF50', 'ADCYAP1', 'CLDN9', 'FAM90A1', 'SLC6A20', 'IYD', 'SPIB', 'FAM95B1', 'CA3', 'OTOA', 'ZNF835', 'PCDH9', 'C2CD4A', 'C1ORF95', 'RYR2', 'LINC01550', 'ZCCHC18', 'CLEC3A', 'VSIG1', 'AURKC', 'ULBP3', 'CLECL1', 'CCDC158', 'CCDC65', 'IL20RB', 'ARC', 'GSDMC', 'TAS1R3', 'DDX11L2', 'SCN2B', 'TTC16', 'PCSK1N', 'SVOPL', 'ALDH8A1', 'BPIFB2', 'CRYGS', 'MYOZ1', 'COLCA2', 'GSTM1', 'PDE1C', 'KNDC1', 'DUOXA1', 'B3GALT5.AS1', 'PCYT1B', 'IL22RA1', 'LOC148709', 'KLHL4', 'PPP1R36', 'HOXD3', 'TARP', 'FAM57B', 'OR7E91P', 'CAMP', 'LOC90768', 'LOC441455', 'JPH3', 'CPEB1', 'LUZP2', 'FLJ37201', 'IL12RB2', 'RELN', 'FUT7', 'LBX2', 'SCARA5', 'RIMS1', 'PLA2G5', 'GPR18', 'MNX1', 'ZBED3.AS1', 'HIST1H2BN', 'SLC22A18AS', 'HOXB13', 'KCNE1', 'CD177', 'TUBB8', 'ZC3H12D', 'IGSF5', 'ASTN1', 'CIDEA', 'TCHH', 'KCNE2', 'ONECUT2', 'IRX4', 'C10ORF128', 'GAL', 'WDR72', 'CHRNA6', 'SP5', 'BTBD8', 'FAM135B', 'SLC16A10', 'SCN7A', 'MGC16142', 'HOXB8', 'SCART1', 'LINC01124', 'RSPH4A', 'CCDC183', 'ALB', 'YPEL4', 'GBP1P1', 'CCDC7', 'DCSTAMP', 'GRIN2C', 'CELF5', 'MGAT5B', 'CXXC4', 'SLC35F1', 'GPR3', 'CXCR5', 'HOXA11', 'PYDC1', 'CCDC153', 'OBP2B', 'SLC30A2', 'ATP13A5', 'NIPAL1', 'SKIDA1', 'SRL', 'FOXJ1', 'PCSK9', 'LRP1B', 'RPGRIP1', 'WT1', 'TNFRSF9', 'PCAT18', 'STRC', 'SLC18A2', 'INSM1', 'NOXO1', 'CNNM1', 'GPR174', 'PCK1', 'MARCO', 'GPX2', 'FOXD4', 'SLC25A53', 'PPP4R4', 'DMRT3', 'C17ORF104', 'IL20', 'LBP', 'CRISP3', 'KLHL14', 'FOXD1', 'NOS2', 'PKNOX2', 'INHA', 'COL23A1', 'TNFRSF17', 'BTLA', 'AVPR2', 'ADH1C', 'GPLD1', 'PARP15', 'CXCL2', 'MYBPC1', 'GLOD5', 'CST9', 'GPR55', 'SLCO4C1', 'PFN1P2', 'BCL2L14', 'STEAP1B', 'C2ORF40', 'SLC23A1', 'ULBP2', 'VSIG2', 'SCN3A', 'AMH', 'VAT1L', 'CXCR2P1', 'ZNF98', 'DHRS4L1', 'CYSLTR2', 'ZNF454', 'RNF212', 'HAP1', 'TPSG1', 'VGLL1', 'FAM178B', 'FAM218A', 'P2RX1', 'ORM1', 'DBIL5P', 'TMEM105', 'DKK1', 'SYN2', 'EMILIN3', 'ZNF488', 'IL23A', 'SIGLEC17P', 'CRYM', 'AMBP', 'DPY19L2P2', 'PRKG2', 'CXCL1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'CTCFL', 'LRRC2', 'FABP7', 'GPBAR1', 'BRINP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'BDKRB1', 'XIRP1', 'TENM1', 'FUT6', 'LINC00930', 'RERGL', 'BMPER', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'RDM1', 'CECR2', 'CLEC12A', 'HCG27', 'ABHD11.AS1', 'FAM184B', 'PKD1L1', 'PCDHGA3', 'SORCS1', 'SEC14L5', 'WSCD2', 'SSUH2', 'CBLN2', 'ECEL1', 'SPESP1', 'FSCN2', 'CCL17', 'DMRT2', 'ZNF732', 'FAM162B', 'GRIA3', 'TMEM217', 'RSPO1', 'GNB3', 'CTSG', 'RGS6', 'HOXD4', 'PIANP', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'RNF175', 'IL1R2', 'ADAMTS19', 'SERPINA6', 'MT1A', 'RASL10A', 'DIRC3', 'PRSS21', 'HECTD2.AS1', 'PFKFB1', 'POM121L9P', 'CYP46A1', 'LRRC16B', 'SMIM5', 'CAPN11', 'FOXC2', 'ZNF804A', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'VIPR2', 'CYSRT1', 'GPR87', 'IGF2BP3', 'XKR9', 'EMX1', 'SLC26A10', 'HOGA1', 'CA9', 'CEP83.AS1', 'HS3ST3B1', 'SLC13A2', 'HTR7', 'WIPF3', 'ULBP1', 'ZSCAN1', 'ZBTB16', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CYP26A1', 'CITED1', 'ROPN1L', 'MAPT.IT1', 'ANKK1', 'WFDC3', 'GZMM', 'M1AP', 'PVALB', 'FIRRE', 'CDHR1', 'MYO3B', 'IGSF22', 'MRAP2', 'SPAG17', 'INE2', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'CRTAC1', 'MROH7', 'PYGM', 'BTC', 'PCDHA12', 'CFAP61', 'KCNT2', 'HEATR4', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'CLEC4E', 'MIA', 'OPCML', 'ADGRF1', 'LRRC4B', 'NWD1', 'SRSF12', 'B3GAT1', 'CCBE1', 'CIDEC', 'HPDL', 'LINC00173', 'TMEM59L', 'IL11', 'LSAMP', 'RNF182', 'TSPAN8', 'GAS2', 'FASLG', 'KCNA6', 'LOC613037', 'KLK6', 'GALNT13', 'ABCC6P2', 'DHDH', 'NLRP7', 'SMC1B', 'FRMPD1', 'SCN3B', 'RFPL1S', 'C15ORF56', 'COL28A1', 'FAM83A', 'SLC16A11', 'PSORS1C1', 'PTCHD1', 'SLC24A5', 'TUSC5', 'C9ORF47', 'ADGRG2', 'ANO5', 'SLC6A14', 'TMPRSS4', 'RUFY4', 'INTS4P2', 'IGSF1', 'KCNQ3', 'PIK3C2G', 'LOC100133669', 'CYP4F12', 'LINC00908', 'NBPF4', 'MYOM2', 'EBF2', 'VENTX', 'FAM157A', 'DSCAML1', 'PCDHA5', 'PTPRN', 'MAG', 'PLAC1', 'DLX5', 'CCNI2', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'CNTN2', 'FAM19A2', 'KLK7', 'ZBTB20', 'NKX3.2', 'SFTPA2', 'BRE.AS1', 'SLC6A17', 'OR2W3', 'PTPRR', 'RYR3', 'GHRLOS', 'ABCC2', 'TFAP2E', 'ABCD2', 'CD160', 'CD1A', 'GRIA2', 'RGS9', 'CCDC144A', 'DEFB1', 'CDKL2', 'DCX', 'DLK2', 'CACNA1I', 'PWAR5', 'GGT3P', 'MYO16', 'SLC6A11', 'WDR17', 'MSMB', 'CHRFAM7A', 'BTBD19', 'MMP12', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'AGBL4', 'SLC39A2', 'LY6H', 'XCL2', 'SPAG8', 'TUBAL3', 'S100A7', 'P2RY12', 'PCBP3', 'SNORD116.4', 'KCNH3', 'LINC00202.1', 'ZNF727', 'ARL9', 'TM6SF2', 'MAK', 'GRID2IP', 'MPL', 'HRCT1', 'TCN1', 'ELOVL3', 'SLC46A2', 'SYCE3', 'CD70', 'TCTEX1D1', 'NOX5', 'GPM6A', 'GRIN2A', 'PGLYRP2', 'TIGD4', 'SYCE2', 'ARMC3', 'JAKMIP1', 'RAB9B', 'MKRN3', 'CTAGE6', 'BAIAP2L2', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'LONRF3', 'AGAP7P', 'ACY3', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'KLK10', 'SCN9A', 'ACHE', 'AKR1E2', 'SCN2A', 'PRPH2', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'HRC', 'GPR82', 'PAH', 'LOC285593', 'CHODL', 'TTBK1', 'CXADRP3', 'MLLT4.AS1', 'TTYH1', 'CHST9', 'ADGRL3', 'APOBEC3A', 'GABRB3', 'SLC25A34', 'HIST1H2BH', 'TRH', 'BRSK2', 'MAPK4', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'DGCR5', 'CAMK4', 'EPYC', 'MUC15', 'GBP6', 'GPR63', 'ANKLE1', 'CAPSL', 'IL17D', 'ROBO2', 'SLC35F3', 'AIM1L', 'ASGR1', 'HAMP', 'TNFSF11', 'RMRP', 'FAM201A', 'PCDHA1', 'MYO15A', 'FAM159A', 'CHKB.AS1', 'DUSP9', 'NMU', 'PTX3', 'DCLK3', 'NEK5', 'RHCE', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'LOC100132215', 'RUNDC3A', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'LINC00961', 'CYP2E1', 'RRN3P1', 'FOLR1', 'PNMA6A', 'ROPN1B', 'SIGLEC6', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'ADRA2B', 'THSD7B', 'SLC2A14', 'ATP13A4', 'MT1L', 'DPEP1', 'KISS1R', 'KIF19', 'TMEM150B', 'IL1RL1', 'ZMAT4', 'CCR10', 'IL24', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'LIN7A', 'TTLL9', 'WBP2NL', 'RHBG', 'A2ML1', 'PRRT4', 'KIAA1210', 'NIPAL4', 'GPR135', 'LOC90246', 'GNMT', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'FIGF', 'OXGR1', 'CBLN1', 'B3GALT5', 'PCDHB18P', 'RRAD', 'MAP7D2', 'DPF3', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'SLC5A8', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PON3', 'PCDH20', 'GABRB2', 'MASP2', 'TIFAB', 'PHKG1', 'DNAH11', 'KLK8', 'FOXN1', 'WFIKKN1', 'CD19', 'CLCA2', 'DCST2', 'ANK1', 'LINC00669', 'WNT10A', 'GPR171', 'FREM2', 'KCNB1', 'CRB2', 'C19ORF45', 'SLC26A3', 'UCA1', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'RASAL1', 'LINC00685', 'TYMSOS', 'RIC3', 'ANO2', 'CD1E', 'TTC41P', 'COLCA1', 'NEURL3', 'LOC646999', 'CST2', 'MED12L', 'HNRNPCL3', 'PCDHGC5', 'NRXN1', 'RAB3B', 'STXBP6', 'FAM182B', 'MYEOV', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'EYA1', 'ARHGEF33', 'CLPSL1', 'CR2', 'KIF4B', 'FNDC8', 'CXCR2', 'PATL2', 'AJAP1', 'ZNF676', 'VSTM2A', 'CLDN14', 'KCNRG', 'TDRD9', 'CLEC4F', 'LPAR4', 'MSLN', 'C9ORF117', 'MAGEL2', 'FAM43B', 'HAPLN1', 'NDP', 'VIT', 'PDCD1', 'DMRTC1B', 'TRABD2A', 'ABHD1', 'MKX', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 6.608545417378737e-15 NRMSE: 1.125874476954314e-15 MAPE: 5.985349276434821e-12 Pearson Correlation: 0.4604731858400501 Spearman Correlation: 0.3544961339871507 Coefficient of Determination: -0.03241053169657926 RMSE: 1.0836869068671477 NRMSE: 0.19548432550457245 MAPE: 806.2059954156723 Predictor: ElasticNet Pearson Correlation: 0.9369568681350503 Spearman Correlation: 0.8733992648666917 Coefficient of Determination: 0.8471356473493308 RMSE: 0.38364200295692297 NRMSE: 0.06535972928035896 MAPE: 402.28801048444416 Pearson Correlation: 0.632588075633602 Spearman Correlation: 0.5135855978078505 Coefficient of Determination: 0.3867157949309319 RMSE: 0.8352346502523756 NRMSE: 0.15066647129164726 MAPE: 495.51374071462425 Predictor: RandomForests Pearson Correlation: 0.6181130631574091 Spearman Correlation: 0.5739444884806566 Coefficient of Determination: 0.2898748389254848 RMSE: 0.8268761953939348 NRMSE: 0.14087196882190484 MAPE: 757.9821025348591 Pearson Correlation: 0.43637439736859773 Spearman Correlation: 0.4090155850021073 Coefficient of Determination: 0.16363819582331773 RMSE: 0.9753819367386427 NRMSE: 0.17594738739062032 MAPE: 222.32563937252942 Protein: ERBB3 x_train_column_count: 1002 x_train columns: ['DES', 'POU5F1B', 'SOX15', 'ALDH1L1', 'PCSK1', 'AMDHD1', 'ALOX15', 'C4ORF36', 'MPZ', 'PPP2R2B', 'TMEM200C', 'ACTA1', 'LEP', 'ABCA10', 'CA14', 'MST1L', 'TAT', 'NPTX1', 'PCDHGA1', 'CATSPER3', 'MUC6', 'FIBCD1', 'C10ORF55', 'GRIK4', 'GLDC', 'CYP4F35P', 'TUBA3E', 'FDCSP', 'ANP32AP1', 'LOC100272216', 'C1ORF228', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'PDE6G', 'BMX', 'LRFN2', 'IRX6', 'FBLL1', 'CACNA1F', 'LINC00922', 'CCL13', 'MAST1', 'LOC399815', 'XKRX', 'CFAP57', 'KIAA0125', 'PCDHA2', 'FOXP2', 'FOXF1', 'C1ORF186', 'GIPR', 'ALG1L', 'ASB14', 'CADM2', 'NXNL2', 'HHIPL2', 'JAKMIP2', 'KCNJ10', 'ZNF280B', 'LINC01139', 'TSSK4', 'HSD17B2', 'DNAJC5B', 'BRINP2', 'CERS1', 'TMEM35', 'ASAH2B', 'LGR5', 'MAT1A', 'PDZRN4', 'RNASE2', 'LRFN5', 'C2CD4B', 'C10ORF95', 'DNAI1', 'WNK3', 'FCGR3B', 'PCDHAC1', 'TMEM151B', 'GPR141', 'LGALS12', 'GDF6', 'PTCHD2', 'GSDMA', 'LINGO4', 'TMEM132C', 'TMEM253', 'KRT6A', 'MIR503HG', 'HP', 'HIST1H2AM', 'CYP11A1', 'DMC1', 'IL1RL2', 'AOC1', 'PCP4L1', 'MYT1', 'ESYT3', 'TLL2', 'C19ORF26', 'NFE2', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'CD164L2', 'KIAA1875', 'SLC24A2', 'KIF1A', 'HMGCLL1', 'UMODL1', 'HAND2.AS1', 'DYDC2', 'PQLC2L', 'PRAME', 'DGKI', 'EPHA7', 'SPSB4', 'LOC644172', 'TGM1', 'IGDCC3', 'IQSEC3', 'ATP8A2', 'PKD1L2', 'GP1BA', 'C2CD4C', 'UGT2B15', 'AQP7', 'TEKT2', 'CD300LG', 'NPC1L1', 'TMEM232', 'GPR27', 'CNTF', 'PLA2G10', 'MGAM', 'NBPF6', 'SLC25A21', 'DIO3', 'PLEKHD1', 'MCHR1', 'PRSS12', 'KERA', 'SLC6A4', 'CD244', 'LOC100130987', 'FCRL3', 'PTCHD4', 'PNMT', 'LINC00242', 'L1TD1', 'STAP1', 'LINC00839', 'IL10', 'RGN', 'DCANP1', 'CST4', 'FCRLA', 'PLCXD3', 'TBC1D3H', 'SPDYA', 'C6', 'SNAP25', 'TPSD1', 'GFRA2', 'FLG', 'PCDHGB3', 'DLGAP1', 'GJB3', 'GPR158', 'IGFL2', 'SFTPD', 'C1GALT1C1L', 'DNASE1L3', 'ZBED2', 'PROC', 'GDF10', 'NR6A1', 'ITPKA', 'TM4SF19', 'FAM186B', 'BCO2', 'PTH2R', 'BCAN', 'PNPLA3', 'SLC17A7', 'KCNG1', 'C1ORF229', 'PPM1N', 'DOC2B', 'HIST2H2BA', 'ALOX12P2', 'FAM86B2', 'FBXL13', 'SULT4A1', 'GUSBP5', 'FGF18', 'NNAT', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'HTR1D', 'KCNJ3', 'HCN2', 'LCN12', 'LRRC31', 'EGOT', 'LRRIQ3', 'C10ORF82', 'ZNF660', 'RNF183', 'GJB5', 'SLC7A4', 'ATP1A4', 'NAALAD2', 'ADRA1B', 'SYT8', 'RAET1E', 'LTA', 'LRRIQ1', 'PCDHA7', 'SLC38A4', 'AURKAPS1', 'TNFSF15', 'CNGA1', 'C4ORF47', 'MAL', 'LY6G6C', 'SCGB3A1', 'FBXO24', 'TRPA1', 'RPL13AP3', 'KLK11', 'ACSL6', 'GRM8', 'TUBA3D', 'PTGDR', 'RP1', 'LINC01119', 'IQUB', 'CBLN4', 'LINC01341', 'ECT2L', 'SOX8', 'PAX2', 'EYS', 'NKPD1', 'ETV2', 'FXYD1', 'RNF138P1', 'MYCBPAP', 'TEKT3', 'XPNPEP2', 'CCR8', 'PPP1R3G', 'CCIN', 'STKLD1', 'C19ORF18', 'SLC30A8', 'UGT8', 'SLC28A3', 'JPH4', 'PLP1', 'UBE2Q2P1', 'SLC25A18', 'METTL7B', 'HEPACAM2', 'TEX14', 'IDI2.AS1', 'CASQ1', 'LINC00482', 'S100A3', 'ALOXE3', 'GLIS1', 'SGK2', 'NR1I3', 'CCDC36', 'PBX4', 'ZNF843', 'LRIT3', 'WNT2B', 'CACNG1', 'MS4A15', 'GTSE1.AS1', 'ZIC2', 'ST6GALNAC1', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'LPAR3', 'AOC2', 'TNNI3K', 'BCHE', 'GJB1', 'C9ORF43', 'PITX2', 'FCRL6', 'CCDC151', 'PNCK', 'CKMT2', 'FAM189A1', 'DQX1', 'ABCA17P', 'CACNA1G', 'C1ORF101', 'ENPP6', 'NLRP12', 'C2ORF50', 'ADCYAP1', 'CLDN9', 'FAM90A1', 'SLC6A20', 'IYD', 'SPIB', 'FAM95B1', 'CA3', 'OTOA', 'ZNF835', 'PCDH9', 'C2CD4A', 'C1ORF95', 'RYR2', 'LINC01550', 'ZCCHC18', 'CLEC3A', 'VSIG1', 'AURKC', 'ULBP3', 'CLECL1', 'CCDC158', 'CCDC65', 'IL20RB', 'ARC', 'GSDMC', 'TAS1R3', 'DDX11L2', 'SCN2B', 'TTC16', 'PCSK1N', 'SVOPL', 'ALDH8A1', 'BPIFB2', 'CRYGS', 'MYOZ1', 'COLCA2', 'GSTM1', 'PDE1C', 'KNDC1', 'DUOXA1', 'B3GALT5.AS1', 'PCYT1B', 'IL22RA1', 'LOC148709', 'KLHL4', 'PPP1R36', 'HOXD3', 'TARP', 'FAM57B', 'OR7E91P', 'CAMP', 'LOC90768', 'LOC441455', 'JPH3', 'CPEB1', 'LUZP2', 'FLJ37201', 'IL12RB2', 'RELN', 'FUT7', 'LBX2', 'SCARA5', 'RIMS1', 'PLA2G5', 'GPR18', 'MNX1', 'ZBED3.AS1', 'HIST1H2BN', 'SLC22A18AS', 'HOXB13', 'KCNE1', 'CD177', 'TUBB8', 'ZC3H12D', 'IGSF5', 'ASTN1', 'CIDEA', 'TCHH', 'KCNE2', 'ONECUT2', 'IRX4', 'C10ORF128', 'GAL', 'WDR72', 'CHRNA6', 'SP5', 'BTBD8', 'FAM135B', 'SLC16A10', 'SCN7A', 'MGC16142', 'HOXB8', 'SCART1', 'LINC01124', 'RSPH4A', 'CCDC183', 'ALB', 'YPEL4', 'GBP1P1', 'CCDC7', 'DCSTAMP', 'GRIN2C', 'CELF5', 'MGAT5B', 'CXXC4', 'SLC35F1', 'GPR3', 'CXCR5', 'HOXA11', 'PYDC1', 'CCDC153', 'OBP2B', 'SLC30A2', 'ATP13A5', 'NIPAL1', 'SKIDA1', 'SRL', 'FOXJ1', 'PCSK9', 'LRP1B', 'RPGRIP1', 'WT1', 'TNFRSF9', 'PCAT18', 'STRC', 'SLC18A2', 'INSM1', 'NOXO1', 'CNNM1', 'GPR174', 'PCK1', 'MARCO', 'GPX2', 'FOXD4', 'SLC25A53', 'PPP4R4', 'DMRT3', 'C17ORF104', 'IL20', 'LBP', 'CRISP3', 'KLHL14', 'FOXD1', 'NOS2', 'PKNOX2', 'INHA', 'COL23A1', 'TNFRSF17', 'BTLA', 'AVPR2', 'ADH1C', 'GPLD1', 'PARP15', 'CXCL2', 'MYBPC1', 'GLOD5', 'CST9', 'GPR55', 'SLCO4C1', 'PFN1P2', 'BCL2L14', 'STEAP1B', 'C2ORF40', 'SLC23A1', 'ULBP2', 'VSIG2', 'SCN3A', 'AMH', 'VAT1L', 'CXCR2P1', 'ZNF98', 'DHRS4L1', 'CYSLTR2', 'ZNF454', 'RNF212', 'HAP1', 'TPSG1', 'VGLL1', 'FAM178B', 'FAM218A', 'P2RX1', 'ORM1', 'DBIL5P', 'TMEM105', 'DKK1', 'SYN2', 'EMILIN3', 'ZNF488', 'IL23A', 'SIGLEC17P', 'CRYM', 'AMBP', 'DPY19L2P2', 'PRKG2', 'CXCL1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'CTCFL', 'LRRC2', 'FABP7', 'GPBAR1', 'BRINP1', 'LRGUK', 'ADAMTS18', 'VWDE', 'BDKRB1', 'XIRP1', 'TENM1', 'FUT6', 'LINC00930', 'RERGL', 'BMPER', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'RDM1', 'CECR2', 'CLEC12A', 'HCG27', 'ABHD11.AS1', 'FAM184B', 'PKD1L1', 'PCDHGA3', 'SORCS1', 'SEC14L5', 'WSCD2', 'SSUH2', 'CBLN2', 'ECEL1', 'SPESP1', 'FSCN2', 'CCL17', 'DMRT2', 'ZNF732', 'FAM162B', 'GRIA3', 'TMEM217', 'RSPO1', 'GNB3', 'CTSG', 'RGS6', 'HOXD4', 'PIANP', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'RNF175', 'IL1R2', 'ADAMTS19', 'SERPINA6', 'MT1A', 'RASL10A', 'DIRC3', 'PRSS21', 'HECTD2.AS1', 'PFKFB1', 'POM121L9P', 'CYP46A1', 'LRRC16B', 'SMIM5', 'CAPN11', 'FOXC2', 'ZNF804A', 'TBX21', 'TRAT1', 'PART1', 'HIST1H2BE', 'LOC100126784', 'VIPR2', 'CYSRT1', 'GPR87', 'IGF2BP3', 'XKR9', 'EMX1', 'SLC26A10', 'HOGA1', 'CA9', 'CEP83.AS1', 'HS3ST3B1', 'SLC13A2', 'HTR7', 'WIPF3', 'ULBP1', 'ZSCAN1', 'ZBTB16', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CYP26A1', 'CITED1', 'ROPN1L', 'MAPT.IT1', 'ANKK1', 'WFDC3', 'GZMM', 'M1AP', 'PVALB', 'FIRRE', 'CDHR1', 'MYO3B', 'IGSF22', 'MRAP2', 'SPAG17', 'INE2', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'CRTAC1', 'MROH7', 'PYGM', 'BTC', 'PCDHA12', 'CFAP61', 'KCNT2', 'HEATR4', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'CLEC4E', 'MIA', 'OPCML', 'ADGRF1', 'LRRC4B', 'NWD1', 'SRSF12', 'B3GAT1', 'CCBE1', 'CIDEC', 'HPDL', 'LINC00173', 'TMEM59L', 'IL11', 'LSAMP', 'RNF182', 'TSPAN8', 'GAS2', 'FASLG', 'KCNA6', 'LOC613037', 'KLK6', 'GALNT13', 'ABCC6P2', 'DHDH', 'NLRP7', 'SMC1B', 'FRMPD1', 'SCN3B', 'RFPL1S', 'C15ORF56', 'COL28A1', 'FAM83A', 'SLC16A11', 'PSORS1C1', 'PTCHD1', 'SLC24A5', 'TUSC5', 'C9ORF47', 'ADGRG2', 'ANO5', 'SLC6A14', 'TMPRSS4', 'RUFY4', 'INTS4P2', 'IGSF1', 'KCNQ3', 'PIK3C2G', 'LOC100133669', 'CYP4F12', 'LINC00908', 'NBPF4', 'MYOM2', 'EBF2', 'VENTX', 'FAM157A', 'DSCAML1', 'PCDHA5', 'PTPRN', 'MAG', 'PLAC1', 'DLX5', 'CCNI2', 'CDKN2B.AS1', 'DLX2', 'SYT6', 'CNTN2', 'FAM19A2', 'KLK7', 'ZBTB20', 'NKX3.2', 'SFTPA2', 'BRE.AS1', 'SLC6A17', 'OR2W3', 'PTPRR', 'RYR3', 'GHRLOS', 'ABCC2', 'TFAP2E', 'ABCD2', 'CD160', 'CD1A', 'GRIA2', 'RGS9', 'CCDC144A', 'DEFB1', 'CDKL2', 'DCX', 'DLK2', 'CACNA1I', 'PWAR5', 'GGT3P', 'MYO16', 'SLC6A11', 'WDR17', 'MSMB', 'CHRFAM7A', 'BTBD19', 'MMP12', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'AGBL4', 'SLC39A2', 'LY6H', 'XCL2', 'SPAG8', 'TUBAL3', 'S100A7', 'P2RY12', 'PCBP3', 'SNORD116.4', 'KCNH3', 'LINC00202.1', 'ZNF727', 'ARL9', 'TM6SF2', 'MAK', 'GRID2IP', 'MPL', 'HRCT1', 'TCN1', 'ELOVL3', 'SLC46A2', 'SYCE3', 'CD70', 'TCTEX1D1', 'NOX5', 'GPM6A', 'GRIN2A', 'PGLYRP2', 'TIGD4', 'SYCE2', 'ARMC3', 'JAKMIP1', 'RAB9B', 'MKRN3', 'CTAGE6', 'BAIAP2L2', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'LONRF3', 'AGAP7P', 'ACY3', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'KLK10', 'SCN9A', 'ACHE', 'AKR1E2', 'SCN2A', 'PRPH2', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'VN1R1', 'TMEM145', 'C6ORF52', 'CD40LG', 'BEGAIN', 'HRC', 'GPR82', 'PAH', 'LOC285593', 'CHODL', 'TTBK1', 'CXADRP3', 'MLLT4.AS1', 'TTYH1', 'CHST9', 'ADGRL3', 'APOBEC3A', 'GABRB3', 'SLC25A34', 'HIST1H2BH', 'TRH', 'BRSK2', 'MAPK4', 'C8ORF46', 'DNASE1L2', 'ST8SIA2', 'DGCR5', 'CAMK4', 'EPYC', 'MUC15', 'GBP6', 'GPR63', 'ANKLE1', 'CAPSL', 'IL17D', 'ROBO2', 'SLC35F3', 'AIM1L', 'ASGR1', 'HAMP', 'TNFSF11', 'RMRP', 'FAM201A', 'PCDHA1', 'MYO15A', 'FAM159A', 'CHKB.AS1', 'DUSP9', 'NMU', 'PTX3', 'DCLK3', 'NEK5', 'RHCE', 'TDRD6', 'LYG1', 'MTUS2', 'KCNK17', 'LOC100132215', 'RUNDC3A', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'LINC00961', 'CYP2E1', 'RRN3P1', 'FOLR1', 'PNMA6A', 'ROPN1B', 'SIGLEC6', 'LINC00689', 'XCL1', 'HBA1', 'RRN3P2', 'ADRA2B', 'THSD7B', 'SLC2A14', 'ATP13A4', 'MT1L', 'DPEP1', 'KISS1R', 'KIF19', 'TMEM150B', 'IL1RL1', 'ZMAT4', 'CCR10', 'IL24', 'ARRDC3.AS1', 'GLI1', 'GPR173', 'LIN7A', 'TTLL9', 'WBP2NL', 'RHBG', 'A2ML1', 'PRRT4', 'KIAA1210', 'NIPAL4', 'GPR135', 'LOC90246', 'GNMT', 'CD300LB', 'CNTNAP3', 'IL18RAP', 'FIGF', 'OXGR1', 'CBLN1', 'B3GALT5', 'PCDHB18P', 'RRAD', 'MAP7D2', 'DPF3', 'DPY19L2P4', 'MS4A8', 'CACNA2D3', 'HIST1H1D', 'SLC5A8', 'RAB39A', 'TRIM7', 'LRRC24', 'AIM2', 'PON3', 'PCDH20', 'GABRB2', 'MASP2', 'TIFAB', 'PHKG1', 'DNAH11', 'KLK8', 'FOXN1', 'WFIKKN1', 'CD19', 'CLCA2', 'DCST2', 'ANK1', 'LINC00669', 'WNT10A', 'GPR171', 'FREM2', 'KCNB1', 'CRB2', 'C19ORF45', 'SLC26A3', 'UCA1', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'RASAL1', 'LINC00685', 'TYMSOS', 'RIC3', 'ANO2', 'CD1E', 'TTC41P', 'COLCA1', 'NEURL3', 'LOC646999', 'CST2', 'MED12L', 'HNRNPCL3', 'PCDHGC5', 'NRXN1', 'RAB3B', 'STXBP6', 'FAM182B', 'MYEOV', 'SEC14L1P1', 'IL6', 'MAPT.AS1', 'EYA1', 'ARHGEF33', 'CLPSL1', 'CR2', 'KIF4B', 'FNDC8', 'CXCR2', 'PATL2', 'AJAP1', 'ZNF676', 'VSTM2A', 'CLDN14', 'KCNRG', 'TDRD9', 'CLEC4F', 'LPAR4', 'MSLN', 'C9ORF117', 'MAGEL2', 'FAM43B', 'HAPLN1', 'NDP', 'VIT', 'PDCD1', 'DMRTC1B', 'TRABD2A', 'ABHD1', 'MKX', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999884408153 Coefficient of Determination: 1.0 RMSE: 1.867475883958861e-15 NRMSE: 6.77144275821145e-16 MAPE: 1.6148710374477018e-12 Pearson Correlation: 0.20923768073658963 Spearman Correlation: 0.23947181386301578 Coefficient of Determination: -0.4000402954606843 RMSE: 0.5853710963239649 NRMSE: 0.16275000940403556 MAPE: 241.06360501607992 Predictor: ElasticNet Pearson Correlation: 0.7948725363521429 Spearman Correlation: 0.7897591088885333 Coefficient of Determination: 0.5738245595288949 RMSE: 0.2944251979428371 NRMSE: 0.10675818582559624 MAPE: 178.56556270387952 Pearson Correlation: 0.22544573271661647 Spearman Correlation: 0.23944188830284668 Coefficient of Determination: -0.01915546662776646 RMSE: 0.4994375896753574 NRMSE: 0.13885802173499892 MAPE: 170.24264076416898 Predictor: RandomForests Pearson Correlation: 0.5722372776095273 Spearman Correlation: 0.583029012091143 Coefficient of Determination: 0.24257640655376778 RMSE: 0.3925095075627569 NRMSE: 0.1423234262538687 MAPE: 218.71310445998202 Pearson Correlation: 0.21245144221646506 Spearman Correlation: 0.21350640282297786 Coefficient of Determination: 0.028254134947911624 RMSE: 0.48768270868008184 NRMSE: 0.13558982656011173 MAPE: 141.70823617010936 Fold: 4 Protein: RB1 x_train_column_count: 1003 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'SLC28A3', 'PPP1R3G', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'HEPACAM2', 'METTL7B', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'ALOXE3', 'LRIT3', 'SGK2', 'GLIS1', 'ZNF843', 'S100A3', 'WNT2B', 'NR1I3', 'LINC00482', 'CCDC36', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'FCRL6', 'BCHE', 'CKMT2', 'DQX1', 'ABCA17P', 'FAM189A1', 'LPAR3', 'PITX2', 'NLRP12', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'C1ORF101', 'SLC6A20', 'FAM90A1', 'FAM95B1', 'ZNF835', 'CA3', 'CLDN9', 'OTOA', 'SPIB', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'PCSK1N', 'CLECL1', 'ULBP3', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'LINC01550', 'SCN2B', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'GSTM1', 'PCYT1B', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'CPEB1', 'JPH3', 'CAMP', 'LOC441455', 'LOC90768', 'OR7E91P', 'FLJ37201', 'RELN', 'IL12RB2', 'SCARA5', 'LBX2', 'FUT7', 'PLA2G5', 'RIMS1', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'MNX1', 'HOXB13', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'WDR72', 'BTBD8', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'LINC01124', 'HOXB8', 'RSPH4A', 'MGC16142', 'CCDC183', 'ALB', 'SCART1', 'CELF5', 'GBP1P1', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'CCDC153', 'SKIDA1', 'NIPAL1', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'NOXO1', 'PPP4R4', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'CXCR2P1', 'ULBP2', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'ORM1', 'DBIL5P', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'BRINP1', 'CTCFL', 'VWDE', 'BDKRB1', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'CECR2', 'RDM1', 'HCG27', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'CLEC12A', 'PKD1L1', 'CBLN2', 'ECEL1', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'FAM184B', 'SORCS1', 'SPESP1', 'PCDHGA3', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'CHRNB2', 'COL2A1', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'TRAT1', 'GPR87', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'SLC13A2', 'CA9', 'WIPF3', 'EMX1', 'ZSCAN1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CITED1', 'MAPT.IT1', 'GZMM', 'WFDC3', 'FIRRE', 'ROPN1L', 'ANKK1', 'M1AP', 'PVALB', 'CDHR1', 'MYO3B', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'IGSF22', 'HEATR4', 'KCNT2', 'MROH7', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'MIA', 'CIDEC', 'SRSF12', 'CCBE1', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KLK6', 'KCNA6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'DHDH', 'SMC1B', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'ADGRG2', 'C9ORF47', 'TUSC5', 'TMPRSS4', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'FAM157A', 'VENTX', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'FAM19A2', 'CCNI2', 'DLX5', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'GHRLOS', 'CD160', 'PTPRR', 'ABCC2', 'OR2W3', 'RYR3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'CDKL2', 'MYO16', 'CACNA1I', 'PWAR5', 'DCX', 'DLK2', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'FKBP1AP1', 'UNC13A', 'SLC39A2', 'XCL2', 'AGBL4', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'P2RY12', 'HRCT1', 'PCBP3', 'LINC00202.1', 'TM6SF2', 'ZNF727', 'ARL9', 'KCNH3', 'SNORD116.4', 'MAK', 'MPL', 'GRID2IP', 'SLC46A2', 'TCTEX1D1', 'NOX5', 'SYCE3', 'CD70', 'GPM6A', 'ELOVL3', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'PGLYRP2', 'GRIN2A', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'AGAP7P', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'KLK10', 'SCN9A', 'SCN2A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'GABRB3', 'TTYH1', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'SLC35F3', 'IL17D', 'GPR63', 'CAPSL', 'GBP6', 'MUC15', 'ANKLE1', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'FAM201A', 'HAMP', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'LOC100132215', 'MTUS2', 'RUNDC3A', 'RRN3P1', 'C1QL3', 'UCKL1.AS1', 'CYP2E1', 'CYTL1', 'FOLR1', 'PNMA6A', 'LINC00961', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'CCR10', 'KIF19', 'DPEP1', 'IL1RL1', 'GLI1', 'KISS1R', 'IL24', 'ARRDC3.AS1', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'NIPAL4', 'KIAA1210', 'PRRT4', 'RHBG', 'WBP2NL', 'A2ML1', 'GPR135', 'LOC90246', 'CBLN1', 'GNMT', 'PCDHB18P', 'DPF3', 'IL18RAP', 'CD300LB', 'B3GALT5', 'MAP7D2', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'GABRB2', 'PCDH20', 'MASP2', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'GPR171', 'ANK1', 'CD19', 'CRB2', 'KCNB1', 'SLC26A3', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'MED12L', 'RIC3', 'CST2', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'SEC14L1P1', 'FAM182B', 'IL6', 'EYA1', 'NRXN1', 'MYEOV', 'MAPT.AS1', 'ARHGEF33', 'RAB3B', 'STXBP6', 'KCNRG', 'CXCR2', 'MSLN', 'CR2', 'KIF4B', 'PATL2', 'TDRD9', 'AJAP1', 'ZNF676', 'CLEC4F', 'LPAR4', 'VSTM2A', 'CLDN14', 'FNDC8', 'MAGEL2', 'TRABD2A', 'ABHD1', 'NDP', 'PDCD1', 'VIT', 'FAM43B', 'POU3F1', 'TSPAN32', 'SEZ6L', 'HAPLN1', 'C9ORF117', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.2757069698155736e-15 NRMSE: 8.322509398096744e-16 MAPE: 1.2978262357349713e-11 Pearson Correlation: 0.0019085798536830575 Spearman Correlation: -0.02965373633087694 Coefficient of Determination: -3.4274575187014236 RMSE: 0.34693759837141586 NRMSE: 0.33240485798050806 MAPE: 591.4369529267894 Predictor: ElasticNet Pearson Correlation: 0.6217410055007497 Spearman Correlation: 0.5841229829368333 Coefficient of Determination: 0.29926327676833675 RMSE: 0.2105397699243719 NRMSE: 0.07699669760253508 MAPE: 305.4201244047117 Pearson Correlation: 0.1770366354978576 Spearman Correlation: 0.17137121410491404 Coefficient of Determination: -0.08881968913797689 RMSE: 0.17204899860920994 NRMSE: 0.16484210191354956 MAPE: 182.7297408316666 Predictor: RandomForests Pearson Correlation: 0.48220522308773284 Spearman Correlation: 0.48920551377702537 Coefficient of Determination: 0.14362714756991068 RMSE: 0.2327491752490711 NRMSE: 0.08511892014667609 MAPE: 216.8937849100706 Pearson Correlation: 0.15631687528319577 Spearman Correlation: 0.1219541390790409 Coefficient of Determination: -0.0347706796865499 RMSE: 0.16772439098985079 NRMSE: 0.1606986461789089 MAPE: 120.97355111135202 Protein: CDH1 x_train_column_count: 1003 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'SLC28A3', 'PPP1R3G', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'HEPACAM2', 'METTL7B', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'ALOXE3', 'LRIT3', 'SGK2', 'GLIS1', 'ZNF843', 'S100A3', 'WNT2B', 'NR1I3', 'LINC00482', 'CCDC36', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'FCRL6', 'BCHE', 'CKMT2', 'DQX1', 'ABCA17P', 'FAM189A1', 'LPAR3', 'PITX2', 'NLRP12', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'C1ORF101', 'SLC6A20', 'FAM90A1', 'FAM95B1', 'ZNF835', 'CA3', 'CLDN9', 'OTOA', 'SPIB', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'PCSK1N', 'CLECL1', 'ULBP3', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'LINC01550', 'SCN2B', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'GSTM1', 'PCYT1B', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'CPEB1', 'JPH3', 'CAMP', 'LOC441455', 'LOC90768', 'OR7E91P', 'FLJ37201', 'RELN', 'IL12RB2', 'SCARA5', 'LBX2', 'FUT7', 'PLA2G5', 'RIMS1', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'MNX1', 'HOXB13', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'WDR72', 'BTBD8', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'LINC01124', 'HOXB8', 'RSPH4A', 'MGC16142', 'CCDC183', 'ALB', 'SCART1', 'CELF5', 'GBP1P1', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'CCDC153', 'SKIDA1', 'NIPAL1', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'NOXO1', 'PPP4R4', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'CXCR2P1', 'ULBP2', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'ORM1', 'DBIL5P', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'BRINP1', 'CTCFL', 'VWDE', 'BDKRB1', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'CECR2', 'RDM1', 'HCG27', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'CLEC12A', 'PKD1L1', 'CBLN2', 'ECEL1', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'FAM184B', 'SORCS1', 'SPESP1', 'PCDHGA3', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'CHRNB2', 'COL2A1', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'TRAT1', 'GPR87', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'SLC13A2', 'CA9', 'WIPF3', 'EMX1', 'ZSCAN1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CITED1', 'MAPT.IT1', 'GZMM', 'WFDC3', 'FIRRE', 'ROPN1L', 'ANKK1', 'M1AP', 'PVALB', 'CDHR1', 'MYO3B', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'IGSF22', 'HEATR4', 'KCNT2', 'MROH7', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'MIA', 'CIDEC', 'SRSF12', 'CCBE1', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KLK6', 'KCNA6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'DHDH', 'SMC1B', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'ADGRG2', 'C9ORF47', 'TUSC5', 'TMPRSS4', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'FAM157A', 'VENTX', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'FAM19A2', 'CCNI2', 'DLX5', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'GHRLOS', 'CD160', 'PTPRR', 'ABCC2', 'OR2W3', 'RYR3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'CDKL2', 'MYO16', 'CACNA1I', 'PWAR5', 'DCX', 'DLK2', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'FKBP1AP1', 'UNC13A', 'SLC39A2', 'XCL2', 'AGBL4', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'P2RY12', 'HRCT1', 'PCBP3', 'LINC00202.1', 'TM6SF2', 'ZNF727', 'ARL9', 'KCNH3', 'SNORD116.4', 'MAK', 'MPL', 'GRID2IP', 'SLC46A2', 'TCTEX1D1', 'NOX5', 'SYCE3', 'CD70', 'GPM6A', 'ELOVL3', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'PGLYRP2', 'GRIN2A', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'AGAP7P', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'KLK10', 'SCN9A', 'SCN2A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'GABRB3', 'TTYH1', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'SLC35F3', 'IL17D', 'GPR63', 'CAPSL', 'GBP6', 'MUC15', 'ANKLE1', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'FAM201A', 'HAMP', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'LOC100132215', 'MTUS2', 'RUNDC3A', 'RRN3P1', 'C1QL3', 'UCKL1.AS1', 'CYP2E1', 'CYTL1', 'FOLR1', 'PNMA6A', 'LINC00961', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'CCR10', 'KIF19', 'DPEP1', 'IL1RL1', 'GLI1', 'KISS1R', 'IL24', 'ARRDC3.AS1', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'NIPAL4', 'KIAA1210', 'PRRT4', 'RHBG', 'WBP2NL', 'A2ML1', 'GPR135', 'LOC90246', 'CBLN1', 'GNMT', 'PCDHB18P', 'DPF3', 'IL18RAP', 'CD300LB', 'B3GALT5', 'MAP7D2', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'GABRB2', 'PCDH20', 'MASP2', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'GPR171', 'ANK1', 'CD19', 'CRB2', 'KCNB1', 'SLC26A3', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'MED12L', 'RIC3', 'CST2', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'SEC14L1P1', 'FAM182B', 'IL6', 'EYA1', 'NRXN1', 'MYEOV', 'MAPT.AS1', 'ARHGEF33', 'RAB3B', 'STXBP6', 'KCNRG', 'CXCR2', 'MSLN', 'CR2', 'KIF4B', 'PATL2', 'TDRD9', 'AJAP1', 'ZNF676', 'CLEC4F', 'LPAR4', 'VSTM2A', 'CLDN14', 'FNDC8', 'MAGEL2', 'TRABD2A', 'ABHD1', 'NDP', 'PDCD1', 'VIT', 'FAM43B', 'POU3F1', 'TSPAN32', 'SEZ6L', 'HAPLN1', 'C9ORF117', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.0815651197830803e-14 NRMSE: 1.722182605304099e-15 MAPE: 1.0536249732153533e-11 Pearson Correlation: 0.40489320231257375 Spearman Correlation: 0.3679123181087047 Coefficient of Determination: -0.15507676181227303 RMSE: 1.2536331839240764 NRMSE: 0.2274288276775292 MAPE: 502.029060200714 Predictor: ElasticNet Pearson Correlation: 0.9269174893890723 Spearman Correlation: 0.8894042700935897 Coefficient of Determination: 0.8209089179729225 RMSE: 0.47355612021653765 NRMSE: 0.07540462409103812 MAPE: 357.59960702052183 Pearson Correlation: 0.5039257398309327 Spearman Correlation: 0.4939488023541441 Coefficient of Determination: 0.23885914586994206 RMSE: 1.017647975069737 NRMSE: 0.18461738962115615 MAPE: 427.5372429414106 Predictor: RandomForests Pearson Correlation: 0.6383930242760676 Spearman Correlation: 0.6090829908652622 Coefficient of Determination: 0.4009691563926353 RMSE: 0.8660821060375835 NRMSE: 0.1379067714463844 MAPE: 360.0537190446206 Pearson Correlation: 0.6829222178298248 Spearman Correlation: 0.4898340378308957 Coefficient of Determination: 0.3910291945558748 RMSE: 0.9102554596650859 NRMSE: 0.16513469389083957 MAPE: 259.5773077464467 Protein: CDH2 x_train_column_count: 1003 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'SLC28A3', 'PPP1R3G', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'HEPACAM2', 'METTL7B', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'ALOXE3', 'LRIT3', 'SGK2', 'GLIS1', 'ZNF843', 'S100A3', 'WNT2B', 'NR1I3', 'LINC00482', 'CCDC36', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'FCRL6', 'BCHE', 'CKMT2', 'DQX1', 'ABCA17P', 'FAM189A1', 'LPAR3', 'PITX2', 'NLRP12', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'C1ORF101', 'SLC6A20', 'FAM90A1', 'FAM95B1', 'ZNF835', 'CA3', 'CLDN9', 'OTOA', 'SPIB', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'PCSK1N', 'CLECL1', 'ULBP3', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'LINC01550', 'SCN2B', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'GSTM1', 'PCYT1B', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'CPEB1', 'JPH3', 'CAMP', 'LOC441455', 'LOC90768', 'OR7E91P', 'FLJ37201', 'RELN', 'IL12RB2', 'SCARA5', 'LBX2', 'FUT7', 'PLA2G5', 'RIMS1', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'MNX1', 'HOXB13', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'WDR72', 'BTBD8', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'LINC01124', 'HOXB8', 'RSPH4A', 'MGC16142', 'CCDC183', 'ALB', 'SCART1', 'CELF5', 'GBP1P1', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'CCDC153', 'SKIDA1', 'NIPAL1', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'NOXO1', 'PPP4R4', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'CXCR2P1', 'ULBP2', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'ORM1', 'DBIL5P', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'BRINP1', 'CTCFL', 'VWDE', 'BDKRB1', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'CECR2', 'RDM1', 'HCG27', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'CLEC12A', 'PKD1L1', 'CBLN2', 'ECEL1', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'FAM184B', 'SORCS1', 'SPESP1', 'PCDHGA3', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'CHRNB2', 'COL2A1', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'TRAT1', 'GPR87', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'SLC13A2', 'CA9', 'WIPF3', 'EMX1', 'ZSCAN1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CITED1', 'MAPT.IT1', 'GZMM', 'WFDC3', 'FIRRE', 'ROPN1L', 'ANKK1', 'M1AP', 'PVALB', 'CDHR1', 'MYO3B', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'IGSF22', 'HEATR4', 'KCNT2', 'MROH7', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'MIA', 'CIDEC', 'SRSF12', 'CCBE1', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KLK6', 'KCNA6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'DHDH', 'SMC1B', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'ADGRG2', 'C9ORF47', 'TUSC5', 'TMPRSS4', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'FAM157A', 'VENTX', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'FAM19A2', 'CCNI2', 'DLX5', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'GHRLOS', 'CD160', 'PTPRR', 'ABCC2', 'OR2W3', 'RYR3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'CDKL2', 'MYO16', 'CACNA1I', 'PWAR5', 'DCX', 'DLK2', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'FKBP1AP1', 'UNC13A', 'SLC39A2', 'XCL2', 'AGBL4', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'P2RY12', 'HRCT1', 'PCBP3', 'LINC00202.1', 'TM6SF2', 'ZNF727', 'ARL9', 'KCNH3', 'SNORD116.4', 'MAK', 'MPL', 'GRID2IP', 'SLC46A2', 'TCTEX1D1', 'NOX5', 'SYCE3', 'CD70', 'GPM6A', 'ELOVL3', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'PGLYRP2', 'GRIN2A', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'AGAP7P', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'KLK10', 'SCN9A', 'SCN2A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'GABRB3', 'TTYH1', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'SLC35F3', 'IL17D', 'GPR63', 'CAPSL', 'GBP6', 'MUC15', 'ANKLE1', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'FAM201A', 'HAMP', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'LOC100132215', 'MTUS2', 'RUNDC3A', 'RRN3P1', 'C1QL3', 'UCKL1.AS1', 'CYP2E1', 'CYTL1', 'FOLR1', 'PNMA6A', 'LINC00961', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'CCR10', 'KIF19', 'DPEP1', 'IL1RL1', 'GLI1', 'KISS1R', 'IL24', 'ARRDC3.AS1', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'NIPAL4', 'KIAA1210', 'PRRT4', 'RHBG', 'WBP2NL', 'A2ML1', 'GPR135', 'LOC90246', 'CBLN1', 'GNMT', 'PCDHB18P', 'DPF3', 'IL18RAP', 'CD300LB', 'B3GALT5', 'MAP7D2', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'GABRB2', 'PCDH20', 'MASP2', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'GPR171', 'ANK1', 'CD19', 'CRB2', 'KCNB1', 'SLC26A3', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'MED12L', 'RIC3', 'CST2', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'SEC14L1P1', 'FAM182B', 'IL6', 'EYA1', 'NRXN1', 'MYEOV', 'MAPT.AS1', 'ARHGEF33', 'RAB3B', 'STXBP6', 'KCNRG', 'CXCR2', 'MSLN', 'CR2', 'KIF4B', 'PATL2', 'TDRD9', 'AJAP1', 'ZNF676', 'CLEC4F', 'LPAR4', 'VSTM2A', 'CLDN14', 'FNDC8', 'MAGEL2', 'TRABD2A', 'ABHD1', 'NDP', 'PDCD1', 'VIT', 'FAM43B', 'POU3F1', 'TSPAN32', 'SEZ6L', 'HAPLN1', 'C9ORF117', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999036734615 Coefficient of Determination: 1.0 RMSE: 2.1201980459362055e-15 NRMSE: 7.682433676122203e-16 MAPE: 4.2274583013349114e-11 Pearson Correlation: -0.033381236139640044 Spearman Correlation: -0.05771892417611192 Coefficient of Determination: -1.5005761679723246 RMSE: 0.5270021629882082 NRMSE: 0.2718636060151295 MAPE: 890.0493773823023 Predictor: ElasticNet Pearson Correlation: 0.7695434825101677 Spearman Correlation: 0.7620070698673598 Coefficient of Determination: 0.46619246966485206 RMSE: 0.2771710912794566 NRMSE: 0.10043158608575137 MAPE: 1443.1415897053155 Pearson Correlation: 0.20592067546139123 Spearman Correlation: 0.14590954999438896 Coefficient of Determination: -0.017233173143280878 RMSE: 0.33612638993174665 NRMSE: 0.17339688308971288 MAPE: 266.38036170594677 Predictor: RandomForests Pearson Correlation: 0.46065729515376824 Spearman Correlation: 0.4803143512697295 Coefficient of Determination: 0.1326043336910997 RMSE: 0.3533167343969372 NRMSE: 0.128022586563134 MAPE: 1238.1982763184174 Pearson Correlation: 0.23282254114872641 Spearman Correlation: 0.24514769510841786 Coefficient of Determination: 0.020189052588077017 RMSE: 0.32988570574924303 NRMSE: 0.1701775131800395 MAPE: 157.19575612922466 Protein: CDH3 x_train_column_count: 1003 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'SLC28A3', 'PPP1R3G', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'HEPACAM2', 'METTL7B', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'ALOXE3', 'LRIT3', 'SGK2', 'GLIS1', 'ZNF843', 'S100A3', 'WNT2B', 'NR1I3', 'LINC00482', 'CCDC36', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'FCRL6', 'BCHE', 'CKMT2', 'DQX1', 'ABCA17P', 'FAM189A1', 'LPAR3', 'PITX2', 'NLRP12', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'C1ORF101', 'SLC6A20', 'FAM90A1', 'FAM95B1', 'ZNF835', 'CA3', 'CLDN9', 'OTOA', 'SPIB', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'PCSK1N', 'CLECL1', 'ULBP3', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'LINC01550', 'SCN2B', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'GSTM1', 'PCYT1B', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'CPEB1', 'JPH3', 'CAMP', 'LOC441455', 'LOC90768', 'OR7E91P', 'FLJ37201', 'RELN', 'IL12RB2', 'SCARA5', 'LBX2', 'FUT7', 'PLA2G5', 'RIMS1', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'MNX1', 'HOXB13', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'WDR72', 'BTBD8', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'LINC01124', 'HOXB8', 'RSPH4A', 'MGC16142', 'CCDC183', 'ALB', 'SCART1', 'CELF5', 'GBP1P1', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'CCDC153', 'SKIDA1', 'NIPAL1', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'NOXO1', 'PPP4R4', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'CXCR2P1', 'ULBP2', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'ORM1', 'DBIL5P', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'BRINP1', 'CTCFL', 'VWDE', 'BDKRB1', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'CECR2', 'RDM1', 'HCG27', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'CLEC12A', 'PKD1L1', 'CBLN2', 'ECEL1', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'FAM184B', 'SORCS1', 'SPESP1', 'PCDHGA3', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'CHRNB2', 'COL2A1', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'TRAT1', 'GPR87', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'SLC13A2', 'CA9', 'WIPF3', 'EMX1', 'ZSCAN1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CITED1', 'MAPT.IT1', 'GZMM', 'WFDC3', 'FIRRE', 'ROPN1L', 'ANKK1', 'M1AP', 'PVALB', 'CDHR1', 'MYO3B', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'IGSF22', 'HEATR4', 'KCNT2', 'MROH7', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'MIA', 'CIDEC', 'SRSF12', 'CCBE1', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KLK6', 'KCNA6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'DHDH', 'SMC1B', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'ADGRG2', 'C9ORF47', 'TUSC5', 'TMPRSS4', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'FAM157A', 'VENTX', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'FAM19A2', 'CCNI2', 'DLX5', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'GHRLOS', 'CD160', 'PTPRR', 'ABCC2', 'OR2W3', 'RYR3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'CDKL2', 'MYO16', 'CACNA1I', 'PWAR5', 'DCX', 'DLK2', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'FKBP1AP1', 'UNC13A', 'SLC39A2', 'XCL2', 'AGBL4', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'P2RY12', 'HRCT1', 'PCBP3', 'LINC00202.1', 'TM6SF2', 'ZNF727', 'ARL9', 'KCNH3', 'SNORD116.4', 'MAK', 'MPL', 'GRID2IP', 'SLC46A2', 'TCTEX1D1', 'NOX5', 'SYCE3', 'CD70', 'GPM6A', 'ELOVL3', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'PGLYRP2', 'GRIN2A', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'AGAP7P', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'KLK10', 'SCN9A', 'SCN2A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'GABRB3', 'TTYH1', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'SLC35F3', 'IL17D', 'GPR63', 'CAPSL', 'GBP6', 'MUC15', 'ANKLE1', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'FAM201A', 'HAMP', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'LOC100132215', 'MTUS2', 'RUNDC3A', 'RRN3P1', 'C1QL3', 'UCKL1.AS1', 'CYP2E1', 'CYTL1', 'FOLR1', 'PNMA6A', 'LINC00961', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'CCR10', 'KIF19', 'DPEP1', 'IL1RL1', 'GLI1', 'KISS1R', 'IL24', 'ARRDC3.AS1', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'NIPAL4', 'KIAA1210', 'PRRT4', 'RHBG', 'WBP2NL', 'A2ML1', 'GPR135', 'LOC90246', 'CBLN1', 'GNMT', 'PCDHB18P', 'DPF3', 'IL18RAP', 'CD300LB', 'B3GALT5', 'MAP7D2', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'GABRB2', 'PCDH20', 'MASP2', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'GPR171', 'ANK1', 'CD19', 'CRB2', 'KCNB1', 'SLC26A3', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'MED12L', 'RIC3', 'CST2', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'SEC14L1P1', 'FAM182B', 'IL6', 'EYA1', 'NRXN1', 'MYEOV', 'MAPT.AS1', 'ARHGEF33', 'RAB3B', 'STXBP6', 'KCNRG', 'CXCR2', 'MSLN', 'CR2', 'KIF4B', 'PATL2', 'TDRD9', 'AJAP1', 'ZNF676', 'CLEC4F', 'LPAR4', 'VSTM2A', 'CLDN14', 'FNDC8', 'MAGEL2', 'TRABD2A', 'ABHD1', 'NDP', 'PDCD1', 'VIT', 'FAM43B', 'POU3F1', 'TSPAN32', 'SEZ6L', 'HAPLN1', 'C9ORF117', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 1.8742469701754125e-15 NRMSE: 1.3357519350709213e-15 MAPE: 5.837460943219156e-12 Pearson Correlation: 0.14513397465054062 Spearman Correlation: 0.17460317460317465 Coefficient of Determination: -1.0028413653295698 RMSE: 0.2940768686672083 NRMSE: 0.26174134313616626 MAPE: 1031.7307805268194 Predictor: ElasticNet Pearson Correlation: 0.601936133921785 Spearman Correlation: 0.6129495694357905 Coefficient of Determination: 0.32173394509178976 RMSE: 0.16958117478565987 NRMSE: 0.12085834256429143 MAPE: 446.87518451876025 Pearson Correlation: 0.4792579976604972 Spearman Correlation: 0.4415591216848091 Coefficient of Determination: 0.17852938399206875 RMSE: 0.1883361142476308 NRMSE: 0.16762742247506165 MAPE: 287.16187627784745 Predictor: RandomForests Pearson Correlation: 0.5427561413156323 Spearman Correlation: 0.5599157227565053 Coefficient of Determination: 0.24026486251768553 RMSE: 0.17947695995909274 NRMSE: 0.1279109425710141 MAPE: 330.91297750529696 Pearson Correlation: 0.40627626733319677 Spearman Correlation: 0.3458322422972856 Coefficient of Determination: 0.09568556331535272 RMSE: 0.19760472328112894 NRMSE: 0.17587689203867143 MAPE: 229.74456748746607 Protein: PTEN x_train_column_count: 1003 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'SLC28A3', 'PPP1R3G', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'HEPACAM2', 'METTL7B', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'ALOXE3', 'LRIT3', 'SGK2', 'GLIS1', 'ZNF843', 'S100A3', 'WNT2B', 'NR1I3', 'LINC00482', 'CCDC36', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'FCRL6', 'BCHE', 'CKMT2', 'DQX1', 'ABCA17P', 'FAM189A1', 'LPAR3', 'PITX2', 'NLRP12', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'C1ORF101', 'SLC6A20', 'FAM90A1', 'FAM95B1', 'ZNF835', 'CA3', 'CLDN9', 'OTOA', 'SPIB', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'PCSK1N', 'CLECL1', 'ULBP3', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'LINC01550', 'SCN2B', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'GSTM1', 'PCYT1B', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'CPEB1', 'JPH3', 'CAMP', 'LOC441455', 'LOC90768', 'OR7E91P', 'FLJ37201', 'RELN', 'IL12RB2', 'SCARA5', 'LBX2', 'FUT7', 'PLA2G5', 'RIMS1', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'MNX1', 'HOXB13', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'WDR72', 'BTBD8', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'LINC01124', 'HOXB8', 'RSPH4A', 'MGC16142', 'CCDC183', 'ALB', 'SCART1', 'CELF5', 'GBP1P1', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'CCDC153', 'SKIDA1', 'NIPAL1', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'NOXO1', 'PPP4R4', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'CXCR2P1', 'ULBP2', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'ORM1', 'DBIL5P', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'BRINP1', 'CTCFL', 'VWDE', 'BDKRB1', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'CECR2', 'RDM1', 'HCG27', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'CLEC12A', 'PKD1L1', 'CBLN2', 'ECEL1', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'FAM184B', 'SORCS1', 'SPESP1', 'PCDHGA3', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'CHRNB2', 'COL2A1', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'TRAT1', 'GPR87', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'SLC13A2', 'CA9', 'WIPF3', 'EMX1', 'ZSCAN1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CITED1', 'MAPT.IT1', 'GZMM', 'WFDC3', 'FIRRE', 'ROPN1L', 'ANKK1', 'M1AP', 'PVALB', 'CDHR1', 'MYO3B', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'IGSF22', 'HEATR4', 'KCNT2', 'MROH7', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'MIA', 'CIDEC', 'SRSF12', 'CCBE1', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KLK6', 'KCNA6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'DHDH', 'SMC1B', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'ADGRG2', 'C9ORF47', 'TUSC5', 'TMPRSS4', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'FAM157A', 'VENTX', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'FAM19A2', 'CCNI2', 'DLX5', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'GHRLOS', 'CD160', 'PTPRR', 'ABCC2', 'OR2W3', 'RYR3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'CDKL2', 'MYO16', 'CACNA1I', 'PWAR5', 'DCX', 'DLK2', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'FKBP1AP1', 'UNC13A', 'SLC39A2', 'XCL2', 'AGBL4', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'P2RY12', 'HRCT1', 'PCBP3', 'LINC00202.1', 'TM6SF2', 'ZNF727', 'ARL9', 'KCNH3', 'SNORD116.4', 'MAK', 'MPL', 'GRID2IP', 'SLC46A2', 'TCTEX1D1', 'NOX5', 'SYCE3', 'CD70', 'GPM6A', 'ELOVL3', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'PGLYRP2', 'GRIN2A', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'AGAP7P', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'KLK10', 'SCN9A', 'SCN2A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'GABRB3', 'TTYH1', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'SLC35F3', 'IL17D', 'GPR63', 'CAPSL', 'GBP6', 'MUC15', 'ANKLE1', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'FAM201A', 'HAMP', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'LOC100132215', 'MTUS2', 'RUNDC3A', 'RRN3P1', 'C1QL3', 'UCKL1.AS1', 'CYP2E1', 'CYTL1', 'FOLR1', 'PNMA6A', 'LINC00961', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'CCR10', 'KIF19', 'DPEP1', 'IL1RL1', 'GLI1', 'KISS1R', 'IL24', 'ARRDC3.AS1', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'NIPAL4', 'KIAA1210', 'PRRT4', 'RHBG', 'WBP2NL', 'A2ML1', 'GPR135', 'LOC90246', 'CBLN1', 'GNMT', 'PCDHB18P', 'DPF3', 'IL18RAP', 'CD300LB', 'B3GALT5', 'MAP7D2', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'GABRB2', 'PCDH20', 'MASP2', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'GPR171', 'ANK1', 'CD19', 'CRB2', 'KCNB1', 'SLC26A3', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'MED12L', 'RIC3', 'CST2', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'SEC14L1P1', 'FAM182B', 'IL6', 'EYA1', 'NRXN1', 'MYEOV', 'MAPT.AS1', 'ARHGEF33', 'RAB3B', 'STXBP6', 'KCNRG', 'CXCR2', 'MSLN', 'CR2', 'KIF4B', 'PATL2', 'TDRD9', 'AJAP1', 'ZNF676', 'CLEC4F', 'LPAR4', 'VSTM2A', 'CLDN14', 'FNDC8', 'MAGEL2', 'TRABD2A', 'ABHD1', 'NDP', 'PDCD1', 'VIT', 'FAM43B', 'POU3F1', 'TSPAN32', 'SEZ6L', 'HAPLN1', 'C9ORF117', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 6.69538062897116e-15 NRMSE: 1.2951448137130842e-15 MAPE: 1.1812926452982187e-11 Pearson Correlation: 0.0797564414426755 Spearman Correlation: 0.021813239566578137 Coefficient of Determination: -0.7706196832090446 RMSE: 0.9920918175727371 NRMSE: 0.15512341764877446 MAPE: 1795.5552889119929 Predictor: ElasticNet Pearson Correlation: 0.8376063122668645 Spearman Correlation: 0.8035869612249869 Coefficient of Determination: 0.623033056887581 RMSE: 0.3449204197659185 NRMSE: 0.0667209106634785 MAPE: 192.2505395259256 Pearson Correlation: 0.119866910535251 Spearman Correlation: 0.09076671778949863 Coefficient of Determination: -0.06358854208255149 RMSE: 0.7689109556492514 NRMSE: 0.12022687133910584 MAPE: 1718.7728205747558 Predictor: RandomForests Pearson Correlation: 0.5237893163082983 Spearman Correlation: 0.5159948475322432 Coefficient of Determination: 0.16629622254495668 RMSE: 0.512947782495392 NRMSE: 0.09922388240780562 MAPE: 294.03416130723446 Pearson Correlation: 0.17212936239298365 Spearman Correlation: 0.17668300103492562 Coefficient of Determination: 0.0237226018376665 RMSE: 0.7366748466753674 NRMSE: 0.11518643525531505 MAPE: 698.0098575545269 Protein: BRCA2 x_train_column_count: 1003 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'SLC28A3', 'PPP1R3G', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'HEPACAM2', 'METTL7B', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'ALOXE3', 'LRIT3', 'SGK2', 'GLIS1', 'ZNF843', 'S100A3', 'WNT2B', 'NR1I3', 'LINC00482', 'CCDC36', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'FCRL6', 'BCHE', 'CKMT2', 'DQX1', 'ABCA17P', 'FAM189A1', 'LPAR3', 'PITX2', 'NLRP12', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'C1ORF101', 'SLC6A20', 'FAM90A1', 'FAM95B1', 'ZNF835', 'CA3', 'CLDN9', 'OTOA', 'SPIB', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'PCSK1N', 'CLECL1', 'ULBP3', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'LINC01550', 'SCN2B', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'GSTM1', 'PCYT1B', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'CPEB1', 'JPH3', 'CAMP', 'LOC441455', 'LOC90768', 'OR7E91P', 'FLJ37201', 'RELN', 'IL12RB2', 'SCARA5', 'LBX2', 'FUT7', 'PLA2G5', 'RIMS1', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'MNX1', 'HOXB13', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'WDR72', 'BTBD8', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'LINC01124', 'HOXB8', 'RSPH4A', 'MGC16142', 'CCDC183', 'ALB', 'SCART1', 'CELF5', 'GBP1P1', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'CCDC153', 'SKIDA1', 'NIPAL1', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'NOXO1', 'PPP4R4', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'CXCR2P1', 'ULBP2', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'ORM1', 'DBIL5P', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'BRINP1', 'CTCFL', 'VWDE', 'BDKRB1', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'CECR2', 'RDM1', 'HCG27', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'CLEC12A', 'PKD1L1', 'CBLN2', 'ECEL1', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'FAM184B', 'SORCS1', 'SPESP1', 'PCDHGA3', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'CHRNB2', 'COL2A1', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'TRAT1', 'GPR87', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'SLC13A2', 'CA9', 'WIPF3', 'EMX1', 'ZSCAN1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CITED1', 'MAPT.IT1', 'GZMM', 'WFDC3', 'FIRRE', 'ROPN1L', 'ANKK1', 'M1AP', 'PVALB', 'CDHR1', 'MYO3B', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'IGSF22', 'HEATR4', 'KCNT2', 'MROH7', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'MIA', 'CIDEC', 'SRSF12', 'CCBE1', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KLK6', 'KCNA6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'DHDH', 'SMC1B', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'ADGRG2', 'C9ORF47', 'TUSC5', 'TMPRSS4', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'FAM157A', 'VENTX', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'FAM19A2', 'CCNI2', 'DLX5', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'GHRLOS', 'CD160', 'PTPRR', 'ABCC2', 'OR2W3', 'RYR3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'CDKL2', 'MYO16', 'CACNA1I', 'PWAR5', 'DCX', 'DLK2', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'FKBP1AP1', 'UNC13A', 'SLC39A2', 'XCL2', 'AGBL4', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'P2RY12', 'HRCT1', 'PCBP3', 'LINC00202.1', 'TM6SF2', 'ZNF727', 'ARL9', 'KCNH3', 'SNORD116.4', 'MAK', 'MPL', 'GRID2IP', 'SLC46A2', 'TCTEX1D1', 'NOX5', 'SYCE3', 'CD70', 'GPM6A', 'ELOVL3', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'PGLYRP2', 'GRIN2A', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'AGAP7P', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'KLK10', 'SCN9A', 'SCN2A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'GABRB3', 'TTYH1', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'SLC35F3', 'IL17D', 'GPR63', 'CAPSL', 'GBP6', 'MUC15', 'ANKLE1', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'FAM201A', 'HAMP', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'LOC100132215', 'MTUS2', 'RUNDC3A', 'RRN3P1', 'C1QL3', 'UCKL1.AS1', 'CYP2E1', 'CYTL1', 'FOLR1', 'PNMA6A', 'LINC00961', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'CCR10', 'KIF19', 'DPEP1', 'IL1RL1', 'GLI1', 'KISS1R', 'IL24', 'ARRDC3.AS1', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'NIPAL4', 'KIAA1210', 'PRRT4', 'RHBG', 'WBP2NL', 'A2ML1', 'GPR135', 'LOC90246', 'CBLN1', 'GNMT', 'PCDHB18P', 'DPF3', 'IL18RAP', 'CD300LB', 'B3GALT5', 'MAP7D2', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'GABRB2', 'PCDH20', 'MASP2', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'GPR171', 'ANK1', 'CD19', 'CRB2', 'KCNB1', 'SLC26A3', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'MED12L', 'RIC3', 'CST2', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'SEC14L1P1', 'FAM182B', 'IL6', 'EYA1', 'NRXN1', 'MYEOV', 'MAPT.AS1', 'ARHGEF33', 'RAB3B', 'STXBP6', 'KCNRG', 'CXCR2', 'MSLN', 'CR2', 'KIF4B', 'PATL2', 'TDRD9', 'AJAP1', 'ZNF676', 'CLEC4F', 'LPAR4', 'VSTM2A', 'CLDN14', 'FNDC8', 'MAGEL2', 'TRABD2A', 'ABHD1', 'NDP', 'PDCD1', 'VIT', 'FAM43B', 'POU3F1', 'TSPAN32', 'SEZ6L', 'HAPLN1', 'C9ORF117', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999229387699 Coefficient of Determination: 1.0 RMSE: 1.8756096277005484e-15 NRMSE: 1.2083167194076653e-15 MAPE: 3.831243815854016e-12 Pearson Correlation: 0.18515897234647746 Spearman Correlation: 0.21145151435803444 Coefficient of Determination: -0.7449632623533928 RMSE: 0.27490373395802503 NRMSE: 0.26707574390419314 MAPE: 996.3377299129247 Predictor: ElasticNet Pearson Correlation: 0.5587277414022653 Spearman Correlation: 0.5306983631847372 Coefficient of Determination: 0.23578607161852028 RMSE: 0.1676678863885394 NRMSE: 0.10801603246161341 MAPE: 158.87526245643292 Pearson Correlation: 0.39364697350145506 Spearman Correlation: 0.38318931657501965 Coefficient of Determination: 0.1331266461287215 RMSE: 0.19376053354867562 NRMSE: 0.18824312748217314 MAPE: 218.81020753817424 Predictor: RandomForests Pearson Correlation: 0.5291570607324023 Spearman Correlation: 0.5216272157464472 Coefficient of Determination: 0.1560140810216859 RMSE: 0.17620166818253913 NRMSE: 0.11351371762444139 MAPE: 136.561811685378 Pearson Correlation: 0.32578969055703855 Spearman Correlation: 0.34638087756705194 Coefficient of Determination: 0.07338817258312902 RMSE: 0.20032558261236577 NRMSE: 0.19462123423688274 MAPE: 131.67055408850524 Protein: CDKN2A x_train_column_count: 1003 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'SLC28A3', 'PPP1R3G', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'HEPACAM2', 'METTL7B', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'ALOXE3', 'LRIT3', 'SGK2', 'GLIS1', 'ZNF843', 'S100A3', 'WNT2B', 'NR1I3', 'LINC00482', 'CCDC36', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'FCRL6', 'BCHE', 'CKMT2', 'DQX1', 'ABCA17P', 'FAM189A1', 'LPAR3', 'PITX2', 'NLRP12', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'C1ORF101', 'SLC6A20', 'FAM90A1', 'FAM95B1', 'ZNF835', 'CA3', 'CLDN9', 'OTOA', 'SPIB', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'PCSK1N', 'CLECL1', 'ULBP3', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'LINC01550', 'SCN2B', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'GSTM1', 'PCYT1B', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'CPEB1', 'JPH3', 'CAMP', 'LOC441455', 'LOC90768', 'OR7E91P', 'FLJ37201', 'RELN', 'IL12RB2', 'SCARA5', 'LBX2', 'FUT7', 'PLA2G5', 'RIMS1', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'MNX1', 'HOXB13', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'WDR72', 'BTBD8', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'LINC01124', 'HOXB8', 'RSPH4A', 'MGC16142', 'CCDC183', 'ALB', 'SCART1', 'CELF5', 'GBP1P1', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'CCDC153', 'SKIDA1', 'NIPAL1', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'NOXO1', 'PPP4R4', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'CXCR2P1', 'ULBP2', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'ORM1', 'DBIL5P', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'BRINP1', 'CTCFL', 'VWDE', 'BDKRB1', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'CECR2', 'RDM1', 'HCG27', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'CLEC12A', 'PKD1L1', 'CBLN2', 'ECEL1', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'FAM184B', 'SORCS1', 'SPESP1', 'PCDHGA3', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'CHRNB2', 'COL2A1', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'TRAT1', 'GPR87', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'SLC13A2', 'CA9', 'WIPF3', 'EMX1', 'ZSCAN1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CITED1', 'MAPT.IT1', 'GZMM', 'WFDC3', 'FIRRE', 'ROPN1L', 'ANKK1', 'M1AP', 'PVALB', 'CDHR1', 'MYO3B', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'IGSF22', 'HEATR4', 'KCNT2', 'MROH7', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'MIA', 'CIDEC', 'SRSF12', 'CCBE1', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KLK6', 'KCNA6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'DHDH', 'SMC1B', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'ADGRG2', 'C9ORF47', 'TUSC5', 'TMPRSS4', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'FAM157A', 'VENTX', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'FAM19A2', 'CCNI2', 'DLX5', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'GHRLOS', 'CD160', 'PTPRR', 'ABCC2', 'OR2W3', 'RYR3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'CDKL2', 'MYO16', 'CACNA1I', 'PWAR5', 'DCX', 'DLK2', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'FKBP1AP1', 'UNC13A', 'SLC39A2', 'XCL2', 'AGBL4', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'P2RY12', 'HRCT1', 'PCBP3', 'LINC00202.1', 'TM6SF2', 'ZNF727', 'ARL9', 'KCNH3', 'SNORD116.4', 'MAK', 'MPL', 'GRID2IP', 'SLC46A2', 'TCTEX1D1', 'NOX5', 'SYCE3', 'CD70', 'GPM6A', 'ELOVL3', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'PGLYRP2', 'GRIN2A', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'AGAP7P', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'KLK10', 'SCN9A', 'SCN2A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'GABRB3', 'TTYH1', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'SLC35F3', 'IL17D', 'GPR63', 'CAPSL', 'GBP6', 'MUC15', 'ANKLE1', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'FAM201A', 'HAMP', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'LOC100132215', 'MTUS2', 'RUNDC3A', 'RRN3P1', 'C1QL3', 'UCKL1.AS1', 'CYP2E1', 'CYTL1', 'FOLR1', 'PNMA6A', 'LINC00961', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'CCR10', 'KIF19', 'DPEP1', 'IL1RL1', 'GLI1', 'KISS1R', 'IL24', 'ARRDC3.AS1', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'NIPAL4', 'KIAA1210', 'PRRT4', 'RHBG', 'WBP2NL', 'A2ML1', 'GPR135', 'LOC90246', 'CBLN1', 'GNMT', 'PCDHB18P', 'DPF3', 'IL18RAP', 'CD300LB', 'B3GALT5', 'MAP7D2', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'GABRB2', 'PCDH20', 'MASP2', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'GPR171', 'ANK1', 'CD19', 'CRB2', 'KCNB1', 'SLC26A3', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'MED12L', 'RIC3', 'CST2', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'SEC14L1P1', 'FAM182B', 'IL6', 'EYA1', 'NRXN1', 'MYEOV', 'MAPT.AS1', 'ARHGEF33', 'RAB3B', 'STXBP6', 'KCNRG', 'CXCR2', 'MSLN', 'CR2', 'KIF4B', 'PATL2', 'TDRD9', 'AJAP1', 'ZNF676', 'CLEC4F', 'LPAR4', 'VSTM2A', 'CLDN14', 'FNDC8', 'MAGEL2', 'TRABD2A', 'ABHD1', 'NDP', 'PDCD1', 'VIT', 'FAM43B', 'POU3F1', 'TSPAN32', 'SEZ6L', 'HAPLN1', 'C9ORF117', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 4.058465150162707e-15 NRMSE: 9.174782751582924e-16 MAPE: 4.419055242509967e-12 Pearson Correlation: 0.2919361108891865 Spearman Correlation: 0.23980598261823718 Coefficient of Determination: -0.6180683919107279 RMSE: 0.8022400019191218 NRMSE: 0.2417113594212479 MAPE: 328.70400862429216 Predictor: ElasticNet Pearson Correlation: 0.8838715210762573 Spearman Correlation: 0.8734226361232176 Coefficient of Determination: 0.7228255072199918 RMSE: 0.35481955119110514 NRMSE: 0.0802123999527761 MAPE: 277.97916797464603 Pearson Correlation: 0.40665820379235373 Spearman Correlation: 0.2786643224977868 Coefficient of Determination: 0.13421899774711987 RMSE: 0.5868267494169023 NRMSE: 0.17680830051729504 MAPE: 206.73139182133386 Predictor: RandomForests Pearson Correlation: 0.5854690962586675 Spearman Correlation: 0.5310626394699868 Coefficient of Determination: 0.25977179408371076 RMSE: 0.5798474161973408 NRMSE: 0.1310833991629571 MAPE: 231.04518548225062 Pearson Correlation: 0.5098184474363581 Spearman Correlation: 0.38977792740557865 Coefficient of Determination: 0.21387080101008227 RMSE: 0.559181558160141 NRMSE: 0.16847892683342605 MAPE: 161.55353918689593 Protein: TP53 x_train_column_count: 1003 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'SLC28A3', 'PPP1R3G', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'HEPACAM2', 'METTL7B', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'ALOXE3', 'LRIT3', 'SGK2', 'GLIS1', 'ZNF843', 'S100A3', 'WNT2B', 'NR1I3', 'LINC00482', 'CCDC36', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'FCRL6', 'BCHE', 'CKMT2', 'DQX1', 'ABCA17P', 'FAM189A1', 'LPAR3', 'PITX2', 'NLRP12', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'C1ORF101', 'SLC6A20', 'FAM90A1', 'FAM95B1', 'ZNF835', 'CA3', 'CLDN9', 'OTOA', 'SPIB', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'PCSK1N', 'CLECL1', 'ULBP3', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'LINC01550', 'SCN2B', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'GSTM1', 'PCYT1B', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'CPEB1', 'JPH3', 'CAMP', 'LOC441455', 'LOC90768', 'OR7E91P', 'FLJ37201', 'RELN', 'IL12RB2', 'SCARA5', 'LBX2', 'FUT7', 'PLA2G5', 'RIMS1', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'MNX1', 'HOXB13', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'WDR72', 'BTBD8', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'LINC01124', 'HOXB8', 'RSPH4A', 'MGC16142', 'CCDC183', 'ALB', 'SCART1', 'CELF5', 'GBP1P1', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'CCDC153', 'SKIDA1', 'NIPAL1', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'NOXO1', 'PPP4R4', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'CXCR2P1', 'ULBP2', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'ORM1', 'DBIL5P', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'BRINP1', 'CTCFL', 'VWDE', 'BDKRB1', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'CECR2', 'RDM1', 'HCG27', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'CLEC12A', 'PKD1L1', 'CBLN2', 'ECEL1', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'FAM184B', 'SORCS1', 'SPESP1', 'PCDHGA3', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'CHRNB2', 'COL2A1', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'TRAT1', 'GPR87', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'SLC13A2', 'CA9', 'WIPF3', 'EMX1', 'ZSCAN1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CITED1', 'MAPT.IT1', 'GZMM', 'WFDC3', 'FIRRE', 'ROPN1L', 'ANKK1', 'M1AP', 'PVALB', 'CDHR1', 'MYO3B', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'IGSF22', 'HEATR4', 'KCNT2', 'MROH7', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'MIA', 'CIDEC', 'SRSF12', 'CCBE1', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KLK6', 'KCNA6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'DHDH', 'SMC1B', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'ADGRG2', 'C9ORF47', 'TUSC5', 'TMPRSS4', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'FAM157A', 'VENTX', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'FAM19A2', 'CCNI2', 'DLX5', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'GHRLOS', 'CD160', 'PTPRR', 'ABCC2', 'OR2W3', 'RYR3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'CDKL2', 'MYO16', 'CACNA1I', 'PWAR5', 'DCX', 'DLK2', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'FKBP1AP1', 'UNC13A', 'SLC39A2', 'XCL2', 'AGBL4', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'P2RY12', 'HRCT1', 'PCBP3', 'LINC00202.1', 'TM6SF2', 'ZNF727', 'ARL9', 'KCNH3', 'SNORD116.4', 'MAK', 'MPL', 'GRID2IP', 'SLC46A2', 'TCTEX1D1', 'NOX5', 'SYCE3', 'CD70', 'GPM6A', 'ELOVL3', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'PGLYRP2', 'GRIN2A', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'AGAP7P', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'KLK10', 'SCN9A', 'SCN2A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'GABRB3', 'TTYH1', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'SLC35F3', 'IL17D', 'GPR63', 'CAPSL', 'GBP6', 'MUC15', 'ANKLE1', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'FAM201A', 'HAMP', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'LOC100132215', 'MTUS2', 'RUNDC3A', 'RRN3P1', 'C1QL3', 'UCKL1.AS1', 'CYP2E1', 'CYTL1', 'FOLR1', 'PNMA6A', 'LINC00961', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'CCR10', 'KIF19', 'DPEP1', 'IL1RL1', 'GLI1', 'KISS1R', 'IL24', 'ARRDC3.AS1', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'NIPAL4', 'KIAA1210', 'PRRT4', 'RHBG', 'WBP2NL', 'A2ML1', 'GPR135', 'LOC90246', 'CBLN1', 'GNMT', 'PCDHB18P', 'DPF3', 'IL18RAP', 'CD300LB', 'B3GALT5', 'MAP7D2', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'GABRB2', 'PCDH20', 'MASP2', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'GPR171', 'ANK1', 'CD19', 'CRB2', 'KCNB1', 'SLC26A3', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'MED12L', 'RIC3', 'CST2', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'SEC14L1P1', 'FAM182B', 'IL6', 'EYA1', 'NRXN1', 'MYEOV', 'MAPT.AS1', 'ARHGEF33', 'RAB3B', 'STXBP6', 'KCNRG', 'CXCR2', 'MSLN', 'CR2', 'KIF4B', 'PATL2', 'TDRD9', 'AJAP1', 'ZNF676', 'CLEC4F', 'LPAR4', 'VSTM2A', 'CLDN14', 'FNDC8', 'MAGEL2', 'TRABD2A', 'ABHD1', 'NDP', 'PDCD1', 'VIT', 'FAM43B', 'POU3F1', 'TSPAN32', 'SEZ6L', 'HAPLN1', 'C9ORF117', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 3.6106276650267034e-15 NRMSE: 8.677307534310751e-16 MAPE: 9.838287944575239e-12 Pearson Correlation: 0.16090486153464417 Spearman Correlation: 0.21221960373570742 Coefficient of Determination: -0.9494388047940692 RMSE: 0.6029063593411451 NRMSE: 0.19132595815598663 MAPE: 568.4137598586633 Predictor: ElasticNet Pearson Correlation: 0.7907315162129384 Spearman Correlation: 0.7413787991498683 Coefficient of Determination: 0.575919077951873 RMSE: 0.29312433137553606 NRMSE: 0.07044564560815575 MAPE: 771.7675063193515 Pearson Correlation: 0.35611051397423515 Spearman Correlation: 0.3136273519619946 Coefficient of Determination: 0.09993723662981902 RMSE: 0.40966745018987294 NRMSE: 0.13000363359668474 MAPE: 316.1715822793307 Predictor: RandomForests Pearson Correlation: 0.5384312437096184 Spearman Correlation: 0.563842675109649 Coefficient of Determination: 0.2565866080287805 RMSE: 0.3880991502335039 NRMSE: 0.09327064413206054 MAPE: 813.728936122638 Pearson Correlation: 0.36804535362074503 Spearman Correlation: 0.3259566827516553 Coefficient of Determination: 0.1312139783161077 RMSE: 0.40248664428681247 NRMSE: 0.12772488077139263 MAPE: 188.20302650525167 Protein: CTNNB1 x_train_column_count: 1003 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'SLC28A3', 'PPP1R3G', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'HEPACAM2', 'METTL7B', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'ALOXE3', 'LRIT3', 'SGK2', 'GLIS1', 'ZNF843', 'S100A3', 'WNT2B', 'NR1I3', 'LINC00482', 'CCDC36', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'FCRL6', 'BCHE', 'CKMT2', 'DQX1', 'ABCA17P', 'FAM189A1', 'LPAR3', 'PITX2', 'NLRP12', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'C1ORF101', 'SLC6A20', 'FAM90A1', 'FAM95B1', 'ZNF835', 'CA3', 'CLDN9', 'OTOA', 'SPIB', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'PCSK1N', 'CLECL1', 'ULBP3', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'LINC01550', 'SCN2B', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'GSTM1', 'PCYT1B', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'CPEB1', 'JPH3', 'CAMP', 'LOC441455', 'LOC90768', 'OR7E91P', 'FLJ37201', 'RELN', 'IL12RB2', 'SCARA5', 'LBX2', 'FUT7', 'PLA2G5', 'RIMS1', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'MNX1', 'HOXB13', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'WDR72', 'BTBD8', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'LINC01124', 'HOXB8', 'RSPH4A', 'MGC16142', 'CCDC183', 'ALB', 'SCART1', 'CELF5', 'GBP1P1', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'CCDC153', 'SKIDA1', 'NIPAL1', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'NOXO1', 'PPP4R4', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'CXCR2P1', 'ULBP2', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'ORM1', 'DBIL5P', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'BRINP1', 'CTCFL', 'VWDE', 'BDKRB1', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'CECR2', 'RDM1', 'HCG27', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'CLEC12A', 'PKD1L1', 'CBLN2', 'ECEL1', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'FAM184B', 'SORCS1', 'SPESP1', 'PCDHGA3', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'CHRNB2', 'COL2A1', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'TRAT1', 'GPR87', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'SLC13A2', 'CA9', 'WIPF3', 'EMX1', 'ZSCAN1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CITED1', 'MAPT.IT1', 'GZMM', 'WFDC3', 'FIRRE', 'ROPN1L', 'ANKK1', 'M1AP', 'PVALB', 'CDHR1', 'MYO3B', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'IGSF22', 'HEATR4', 'KCNT2', 'MROH7', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'MIA', 'CIDEC', 'SRSF12', 'CCBE1', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KLK6', 'KCNA6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'DHDH', 'SMC1B', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'ADGRG2', 'C9ORF47', 'TUSC5', 'TMPRSS4', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'FAM157A', 'VENTX', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'FAM19A2', 'CCNI2', 'DLX5', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'GHRLOS', 'CD160', 'PTPRR', 'ABCC2', 'OR2W3', 'RYR3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'CDKL2', 'MYO16', 'CACNA1I', 'PWAR5', 'DCX', 'DLK2', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'FKBP1AP1', 'UNC13A', 'SLC39A2', 'XCL2', 'AGBL4', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'P2RY12', 'HRCT1', 'PCBP3', 'LINC00202.1', 'TM6SF2', 'ZNF727', 'ARL9', 'KCNH3', 'SNORD116.4', 'MAK', 'MPL', 'GRID2IP', 'SLC46A2', 'TCTEX1D1', 'NOX5', 'SYCE3', 'CD70', 'GPM6A', 'ELOVL3', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'PGLYRP2', 'GRIN2A', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'AGAP7P', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'KLK10', 'SCN9A', 'SCN2A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'GABRB3', 'TTYH1', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'SLC35F3', 'IL17D', 'GPR63', 'CAPSL', 'GBP6', 'MUC15', 'ANKLE1', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'FAM201A', 'HAMP', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'LOC100132215', 'MTUS2', 'RUNDC3A', 'RRN3P1', 'C1QL3', 'UCKL1.AS1', 'CYP2E1', 'CYTL1', 'FOLR1', 'PNMA6A', 'LINC00961', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'CCR10', 'KIF19', 'DPEP1', 'IL1RL1', 'GLI1', 'KISS1R', 'IL24', 'ARRDC3.AS1', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'NIPAL4', 'KIAA1210', 'PRRT4', 'RHBG', 'WBP2NL', 'A2ML1', 'GPR135', 'LOC90246', 'CBLN1', 'GNMT', 'PCDHB18P', 'DPF3', 'IL18RAP', 'CD300LB', 'B3GALT5', 'MAP7D2', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'GABRB2', 'PCDH20', 'MASP2', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'GPR171', 'ANK1', 'CD19', 'CRB2', 'KCNB1', 'SLC26A3', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'MED12L', 'RIC3', 'CST2', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'SEC14L1P1', 'FAM182B', 'IL6', 'EYA1', 'NRXN1', 'MYEOV', 'MAPT.AS1', 'ARHGEF33', 'RAB3B', 'STXBP6', 'KCNRG', 'CXCR2', 'MSLN', 'CR2', 'KIF4B', 'PATL2', 'TDRD9', 'AJAP1', 'ZNF676', 'CLEC4F', 'LPAR4', 'VSTM2A', 'CLDN14', 'FNDC8', 'MAGEL2', 'TRABD2A', 'ABHD1', 'NDP', 'PDCD1', 'VIT', 'FAM43B', 'POU3F1', 'TSPAN32', 'SEZ6L', 'HAPLN1', 'C9ORF117', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 4.5875370093738166e-15 NRMSE: 1.1079936743729633e-15 MAPE: 4.30222922933859e-12 Pearson Correlation: 0.3286924450560249 Spearman Correlation: 0.2833227346974401 Coefficient of Determination: -0.3150075472785159 RMSE: 0.920204626242026 NRMSE: 0.19346661892229963 MAPE: 808.7005554164218 Predictor: ElasticNet Pearson Correlation: 0.8721972429444789 Spearman Correlation: 0.8622785753882817 Coefficient of Determination: 0.7022909991677221 RMSE: 0.38817380356963654 NRMSE: 0.09375273006705549 MAPE: 273.91306181557667 Pearson Correlation: 0.3961901629476533 Spearman Correlation: 0.3896233120113717 Coefficient of Determination: 0.12748432051114678 RMSE: 0.7495608753253816 NRMSE: 0.15758995780955798 MAPE: 371.0993044841623 Predictor: RandomForests Pearson Correlation: 0.5114579631740298 Spearman Correlation: 0.5400712334757851 Coefficient of Determination: 0.22361930870607516 RMSE: 0.6268557349292109 NRMSE: 0.15139980072679232 MAPE: 643.071357489603 Pearson Correlation: 0.26897288311776524 Spearman Correlation: 0.31078941133929355 Coefficient of Determination: -0.01254677022424322 RMSE: 0.8074726774251537 NRMSE: 0.16976551119021815 MAPE: 580.5240723211572 Protein: CCNE1 x_train_column_count: 1003 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'SLC28A3', 'PPP1R3G', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'HEPACAM2', 'METTL7B', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'ALOXE3', 'LRIT3', 'SGK2', 'GLIS1', 'ZNF843', 'S100A3', 'WNT2B', 'NR1I3', 'LINC00482', 'CCDC36', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'FCRL6', 'BCHE', 'CKMT2', 'DQX1', 'ABCA17P', 'FAM189A1', 'LPAR3', 'PITX2', 'NLRP12', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'C1ORF101', 'SLC6A20', 'FAM90A1', 'FAM95B1', 'ZNF835', 'CA3', 'CLDN9', 'OTOA', 'SPIB', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'PCSK1N', 'CLECL1', 'ULBP3', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'LINC01550', 'SCN2B', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'GSTM1', 'PCYT1B', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'CPEB1', 'JPH3', 'CAMP', 'LOC441455', 'LOC90768', 'OR7E91P', 'FLJ37201', 'RELN', 'IL12RB2', 'SCARA5', 'LBX2', 'FUT7', 'PLA2G5', 'RIMS1', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'MNX1', 'HOXB13', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'WDR72', 'BTBD8', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'LINC01124', 'HOXB8', 'RSPH4A', 'MGC16142', 'CCDC183', 'ALB', 'SCART1', 'CELF5', 'GBP1P1', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'CCDC153', 'SKIDA1', 'NIPAL1', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'NOXO1', 'PPP4R4', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'CXCR2P1', 'ULBP2', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'ORM1', 'DBIL5P', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'BRINP1', 'CTCFL', 'VWDE', 'BDKRB1', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'CECR2', 'RDM1', 'HCG27', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'CLEC12A', 'PKD1L1', 'CBLN2', 'ECEL1', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'FAM184B', 'SORCS1', 'SPESP1', 'PCDHGA3', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'CHRNB2', 'COL2A1', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'TRAT1', 'GPR87', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'SLC13A2', 'CA9', 'WIPF3', 'EMX1', 'ZSCAN1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CITED1', 'MAPT.IT1', 'GZMM', 'WFDC3', 'FIRRE', 'ROPN1L', 'ANKK1', 'M1AP', 'PVALB', 'CDHR1', 'MYO3B', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'IGSF22', 'HEATR4', 'KCNT2', 'MROH7', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'MIA', 'CIDEC', 'SRSF12', 'CCBE1', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KLK6', 'KCNA6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'DHDH', 'SMC1B', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'ADGRG2', 'C9ORF47', 'TUSC5', 'TMPRSS4', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'FAM157A', 'VENTX', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'FAM19A2', 'CCNI2', 'DLX5', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'GHRLOS', 'CD160', 'PTPRR', 'ABCC2', 'OR2W3', 'RYR3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'CDKL2', 'MYO16', 'CACNA1I', 'PWAR5', 'DCX', 'DLK2', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'FKBP1AP1', 'UNC13A', 'SLC39A2', 'XCL2', 'AGBL4', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'P2RY12', 'HRCT1', 'PCBP3', 'LINC00202.1', 'TM6SF2', 'ZNF727', 'ARL9', 'KCNH3', 'SNORD116.4', 'MAK', 'MPL', 'GRID2IP', 'SLC46A2', 'TCTEX1D1', 'NOX5', 'SYCE3', 'CD70', 'GPM6A', 'ELOVL3', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'PGLYRP2', 'GRIN2A', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'AGAP7P', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'KLK10', 'SCN9A', 'SCN2A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'GABRB3', 'TTYH1', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'SLC35F3', 'IL17D', 'GPR63', 'CAPSL', 'GBP6', 'MUC15', 'ANKLE1', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'FAM201A', 'HAMP', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'LOC100132215', 'MTUS2', 'RUNDC3A', 'RRN3P1', 'C1QL3', 'UCKL1.AS1', 'CYP2E1', 'CYTL1', 'FOLR1', 'PNMA6A', 'LINC00961', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'CCR10', 'KIF19', 'DPEP1', 'IL1RL1', 'GLI1', 'KISS1R', 'IL24', 'ARRDC3.AS1', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'NIPAL4', 'KIAA1210', 'PRRT4', 'RHBG', 'WBP2NL', 'A2ML1', 'GPR135', 'LOC90246', 'CBLN1', 'GNMT', 'PCDHB18P', 'DPF3', 'IL18RAP', 'CD300LB', 'B3GALT5', 'MAP7D2', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'GABRB2', 'PCDH20', 'MASP2', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'GPR171', 'ANK1', 'CD19', 'CRB2', 'KCNB1', 'SLC26A3', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'MED12L', 'RIC3', 'CST2', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'SEC14L1P1', 'FAM182B', 'IL6', 'EYA1', 'NRXN1', 'MYEOV', 'MAPT.AS1', 'ARHGEF33', 'RAB3B', 'STXBP6', 'KCNRG', 'CXCR2', 'MSLN', 'CR2', 'KIF4B', 'PATL2', 'TDRD9', 'AJAP1', 'ZNF676', 'CLEC4F', 'LPAR4', 'VSTM2A', 'CLDN14', 'FNDC8', 'MAGEL2', 'TRABD2A', 'ABHD1', 'NDP', 'PDCD1', 'VIT', 'FAM43B', 'POU3F1', 'TSPAN32', 'SEZ6L', 'HAPLN1', 'C9ORF117', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.297515987635135e-15 NRMSE: 5.544600206663453e-16 MAPE: 4.622868672706835e-13 Pearson Correlation: 0.5852595499698928 Spearman Correlation: 0.4391850272447288 Coefficient of Determination: -0.05972874908796566 RMSE: 0.4653978515383247 NRMSE: 0.18991179773864553 MAPE: 125.7894603444567 Predictor: ElasticNet Pearson Correlation: 0.8568459843740248 Spearman Correlation: 0.7662266766008863 Coefficient of Determination: 0.706470601095033 RMSE: 0.273494683146893 NRMSE: 0.06600252990006347 MAPE: 47.94913342363864 Pearson Correlation: 0.7336575608317948 Spearman Correlation: 0.5848077906208307 Coefficient of Determination: 0.5315552673002093 RMSE: 0.3094255673418208 NRMSE: 0.1262652278388235 MAPE: 81.44538341834587 Predictor: RandomForests Pearson Correlation: 0.6479860753667811 Spearman Correlation: 0.6017079696220019 Coefficient of Determination: 0.3917705699127322 RMSE: 0.3936921909151702 NRMSE: 0.09500981994718977 MAPE: 69.15312501342795 Pearson Correlation: 0.6110011257705447 Spearman Correlation: 0.5140687539744885 Coefficient of Determination: 0.3526062073430789 RMSE: 0.3637569346058403 NRMSE: 0.14843586656567384 MAPE: 93.6576670772787 Protein: CCND1 x_train_column_count: 1003 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'SLC28A3', 'PPP1R3G', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'HEPACAM2', 'METTL7B', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'ALOXE3', 'LRIT3', 'SGK2', 'GLIS1', 'ZNF843', 'S100A3', 'WNT2B', 'NR1I3', 'LINC00482', 'CCDC36', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'FCRL6', 'BCHE', 'CKMT2', 'DQX1', 'ABCA17P', 'FAM189A1', 'LPAR3', 'PITX2', 'NLRP12', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'C1ORF101', 'SLC6A20', 'FAM90A1', 'FAM95B1', 'ZNF835', 'CA3', 'CLDN9', 'OTOA', 'SPIB', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'PCSK1N', 'CLECL1', 'ULBP3', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'LINC01550', 'SCN2B', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'GSTM1', 'PCYT1B', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'CPEB1', 'JPH3', 'CAMP', 'LOC441455', 'LOC90768', 'OR7E91P', 'FLJ37201', 'RELN', 'IL12RB2', 'SCARA5', 'LBX2', 'FUT7', 'PLA2G5', 'RIMS1', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'MNX1', 'HOXB13', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'WDR72', 'BTBD8', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'LINC01124', 'HOXB8', 'RSPH4A', 'MGC16142', 'CCDC183', 'ALB', 'SCART1', 'CELF5', 'GBP1P1', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'CCDC153', 'SKIDA1', 'NIPAL1', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'NOXO1', 'PPP4R4', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'CXCR2P1', 'ULBP2', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'ORM1', 'DBIL5P', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'BRINP1', 'CTCFL', 'VWDE', 'BDKRB1', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'CECR2', 'RDM1', 'HCG27', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'CLEC12A', 'PKD1L1', 'CBLN2', 'ECEL1', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'FAM184B', 'SORCS1', 'SPESP1', 'PCDHGA3', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'CHRNB2', 'COL2A1', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'TRAT1', 'GPR87', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'SLC13A2', 'CA9', 'WIPF3', 'EMX1', 'ZSCAN1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CITED1', 'MAPT.IT1', 'GZMM', 'WFDC3', 'FIRRE', 'ROPN1L', 'ANKK1', 'M1AP', 'PVALB', 'CDHR1', 'MYO3B', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'IGSF22', 'HEATR4', 'KCNT2', 'MROH7', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'MIA', 'CIDEC', 'SRSF12', 'CCBE1', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KLK6', 'KCNA6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'DHDH', 'SMC1B', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'ADGRG2', 'C9ORF47', 'TUSC5', 'TMPRSS4', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'FAM157A', 'VENTX', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'FAM19A2', 'CCNI2', 'DLX5', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'GHRLOS', 'CD160', 'PTPRR', 'ABCC2', 'OR2W3', 'RYR3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'CDKL2', 'MYO16', 'CACNA1I', 'PWAR5', 'DCX', 'DLK2', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'FKBP1AP1', 'UNC13A', 'SLC39A2', 'XCL2', 'AGBL4', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'P2RY12', 'HRCT1', 'PCBP3', 'LINC00202.1', 'TM6SF2', 'ZNF727', 'ARL9', 'KCNH3', 'SNORD116.4', 'MAK', 'MPL', 'GRID2IP', 'SLC46A2', 'TCTEX1D1', 'NOX5', 'SYCE3', 'CD70', 'GPM6A', 'ELOVL3', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'PGLYRP2', 'GRIN2A', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'AGAP7P', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'KLK10', 'SCN9A', 'SCN2A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'GABRB3', 'TTYH1', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'SLC35F3', 'IL17D', 'GPR63', 'CAPSL', 'GBP6', 'MUC15', 'ANKLE1', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'FAM201A', 'HAMP', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'LOC100132215', 'MTUS2', 'RUNDC3A', 'RRN3P1', 'C1QL3', 'UCKL1.AS1', 'CYP2E1', 'CYTL1', 'FOLR1', 'PNMA6A', 'LINC00961', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'CCR10', 'KIF19', 'DPEP1', 'IL1RL1', 'GLI1', 'KISS1R', 'IL24', 'ARRDC3.AS1', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'NIPAL4', 'KIAA1210', 'PRRT4', 'RHBG', 'WBP2NL', 'A2ML1', 'GPR135', 'LOC90246', 'CBLN1', 'GNMT', 'PCDHB18P', 'DPF3', 'IL18RAP', 'CD300LB', 'B3GALT5', 'MAP7D2', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'GABRB2', 'PCDH20', 'MASP2', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'GPR171', 'ANK1', 'CD19', 'CRB2', 'KCNB1', 'SLC26A3', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'MED12L', 'RIC3', 'CST2', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'SEC14L1P1', 'FAM182B', 'IL6', 'EYA1', 'NRXN1', 'MYEOV', 'MAPT.AS1', 'ARHGEF33', 'RAB3B', 'STXBP6', 'KCNRG', 'CXCR2', 'MSLN', 'CR2', 'KIF4B', 'PATL2', 'TDRD9', 'AJAP1', 'ZNF676', 'CLEC4F', 'LPAR4', 'VSTM2A', 'CLDN14', 'FNDC8', 'MAGEL2', 'TRABD2A', 'ABHD1', 'NDP', 'PDCD1', 'VIT', 'FAM43B', 'POU3F1', 'TSPAN32', 'SEZ6L', 'HAPLN1', 'C9ORF117', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.3737421789528172e-15 NRMSE: 8.776671515523806e-16 MAPE: 3.8685042973640666e-12 Pearson Correlation: 0.1257678678990163 Spearman Correlation: 0.10889661965859924 Coefficient of Determination: -1.1593281819591592 RMSE: 0.3365102672180033 NRMSE: 0.21222897781155609 MAPE: 618.6348338390383 Predictor: ElasticNet Pearson Correlation: 0.6197608037358658 Spearman Correlation: 0.6240442433163544 Coefficient of Determination: 0.3032685838046709 RMSE: 0.20058543721484537 NRMSE: 0.12815159352349534 MAPE: 478.8147305256241 Pearson Correlation: 0.22439320213061031 Spearman Correlation: 0.20909238269803865 Coefficient of Determination: 0.03911602887328114 RMSE: 0.2244783530776945 NRMSE: 0.1415731288330566 MAPE: 474.2428824446951 Predictor: RandomForests Pearson Correlation: 0.5238343241070503 Spearman Correlation: 0.5492924642712363 Coefficient of Determination: 0.16037283500583066 RMSE: 0.2201962624849756 NRMSE: 0.1406807110086605 MAPE: 557.1211428886807 Pearson Correlation: 0.2351382186453758 Spearman Correlation: 0.20723699796755574 Coefficient of Determination: 0.045021664559768526 RMSE: 0.2237874629027218 NRMSE: 0.14113740092250368 MAPE: 521.7099686588635 Protein: ERBB2 x_train_column_count: 1003 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'SLC28A3', 'PPP1R3G', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'HEPACAM2', 'METTL7B', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'ALOXE3', 'LRIT3', 'SGK2', 'GLIS1', 'ZNF843', 'S100A3', 'WNT2B', 'NR1I3', 'LINC00482', 'CCDC36', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'FCRL6', 'BCHE', 'CKMT2', 'DQX1', 'ABCA17P', 'FAM189A1', 'LPAR3', 'PITX2', 'NLRP12', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'C1ORF101', 'SLC6A20', 'FAM90A1', 'FAM95B1', 'ZNF835', 'CA3', 'CLDN9', 'OTOA', 'SPIB', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'PCSK1N', 'CLECL1', 'ULBP3', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'LINC01550', 'SCN2B', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'GSTM1', 'PCYT1B', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'CPEB1', 'JPH3', 'CAMP', 'LOC441455', 'LOC90768', 'OR7E91P', 'FLJ37201', 'RELN', 'IL12RB2', 'SCARA5', 'LBX2', 'FUT7', 'PLA2G5', 'RIMS1', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'MNX1', 'HOXB13', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'WDR72', 'BTBD8', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'LINC01124', 'HOXB8', 'RSPH4A', 'MGC16142', 'CCDC183', 'ALB', 'SCART1', 'CELF5', 'GBP1P1', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'CCDC153', 'SKIDA1', 'NIPAL1', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'NOXO1', 'PPP4R4', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'CXCR2P1', 'ULBP2', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'ORM1', 'DBIL5P', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'BRINP1', 'CTCFL', 'VWDE', 'BDKRB1', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'CECR2', 'RDM1', 'HCG27', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'CLEC12A', 'PKD1L1', 'CBLN2', 'ECEL1', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'FAM184B', 'SORCS1', 'SPESP1', 'PCDHGA3', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'CHRNB2', 'COL2A1', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'TRAT1', 'GPR87', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'SLC13A2', 'CA9', 'WIPF3', 'EMX1', 'ZSCAN1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CITED1', 'MAPT.IT1', 'GZMM', 'WFDC3', 'FIRRE', 'ROPN1L', 'ANKK1', 'M1AP', 'PVALB', 'CDHR1', 'MYO3B', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'IGSF22', 'HEATR4', 'KCNT2', 'MROH7', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'MIA', 'CIDEC', 'SRSF12', 'CCBE1', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KLK6', 'KCNA6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'DHDH', 'SMC1B', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'ADGRG2', 'C9ORF47', 'TUSC5', 'TMPRSS4', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'FAM157A', 'VENTX', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'FAM19A2', 'CCNI2', 'DLX5', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'GHRLOS', 'CD160', 'PTPRR', 'ABCC2', 'OR2W3', 'RYR3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'CDKL2', 'MYO16', 'CACNA1I', 'PWAR5', 'DCX', 'DLK2', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'FKBP1AP1', 'UNC13A', 'SLC39A2', 'XCL2', 'AGBL4', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'P2RY12', 'HRCT1', 'PCBP3', 'LINC00202.1', 'TM6SF2', 'ZNF727', 'ARL9', 'KCNH3', 'SNORD116.4', 'MAK', 'MPL', 'GRID2IP', 'SLC46A2', 'TCTEX1D1', 'NOX5', 'SYCE3', 'CD70', 'GPM6A', 'ELOVL3', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'PGLYRP2', 'GRIN2A', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'AGAP7P', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'KLK10', 'SCN9A', 'SCN2A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'GABRB3', 'TTYH1', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'SLC35F3', 'IL17D', 'GPR63', 'CAPSL', 'GBP6', 'MUC15', 'ANKLE1', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'FAM201A', 'HAMP', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'LOC100132215', 'MTUS2', 'RUNDC3A', 'RRN3P1', 'C1QL3', 'UCKL1.AS1', 'CYP2E1', 'CYTL1', 'FOLR1', 'PNMA6A', 'LINC00961', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'CCR10', 'KIF19', 'DPEP1', 'IL1RL1', 'GLI1', 'KISS1R', 'IL24', 'ARRDC3.AS1', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'NIPAL4', 'KIAA1210', 'PRRT4', 'RHBG', 'WBP2NL', 'A2ML1', 'GPR135', 'LOC90246', 'CBLN1', 'GNMT', 'PCDHB18P', 'DPF3', 'IL18RAP', 'CD300LB', 'B3GALT5', 'MAP7D2', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'GABRB2', 'PCDH20', 'MASP2', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'GPR171', 'ANK1', 'CD19', 'CRB2', 'KCNB1', 'SLC26A3', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'MED12L', 'RIC3', 'CST2', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'SEC14L1P1', 'FAM182B', 'IL6', 'EYA1', 'NRXN1', 'MYEOV', 'MAPT.AS1', 'ARHGEF33', 'RAB3B', 'STXBP6', 'KCNRG', 'CXCR2', 'MSLN', 'CR2', 'KIF4B', 'PATL2', 'TDRD9', 'AJAP1', 'ZNF676', 'CLEC4F', 'LPAR4', 'VSTM2A', 'CLDN14', 'FNDC8', 'MAGEL2', 'TRABD2A', 'ABHD1', 'NDP', 'PDCD1', 'VIT', 'FAM43B', 'POU3F1', 'TSPAN32', 'SEZ6L', 'HAPLN1', 'C9ORF117', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 5.515243319509251e-15 NRMSE: 9.396124707411368e-16 MAPE: 4.961792012630301e-12 Pearson Correlation: 0.5221294815739395 Spearman Correlation: 0.4378513919770383 Coefficient of Determination: 0.021878385835697456 RMSE: 1.0252630372373166 NRMSE: 0.1846189788665172 MAPE: 793.014784272315 Predictor: ElasticNet Pearson Correlation: 0.9376756230554657 Spearman Correlation: 0.8728033889062968 Coefficient of Determination: 0.8483488617740353 RMSE: 0.3819568925649673 NRMSE: 0.06507264299111834 MAPE: 544.7042609841886 Pearson Correlation: 0.6074785338033943 Spearman Correlation: 0.4976801427454869 Coefficient of Determination: 0.3594629918684591 RMSE: 0.8296806968052541 NRMSE: 0.14940049281615841 MAPE: 455.80247211107877 Predictor: RandomForests Pearson Correlation: 0.6198115975771726 Spearman Correlation: 0.5663297986374654 Coefficient of Determination: 0.2836443575732954 RMSE: 0.8301486334154883 NRMSE: 0.1414294824974851 MAPE: 797.0525083682701 Pearson Correlation: 0.5449212566397169 Spearman Correlation: 0.49613149307572707 Coefficient of Determination: 0.18310104610594224 RMSE: 0.9369642971461049 NRMSE: 0.16871903647245018 MAPE: 230.66625836573883 Protein: ERBB3 x_train_column_count: 1003 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'CATSPER3', 'MUC6', 'TUBA3E', 'GLDC', 'GRIK4', 'FIBCD1', 'CYP4F35P', 'C10ORF55', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'MAST1', 'SLC26A4', 'FBLL1', 'CACNA1F', 'XKRX', 'LINC00922', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ALG1L', 'ASB14', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'AQP5', 'HMGCLL1', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'CD300LG', 'TEKT2', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'GPR27', 'NBPF6', 'PLA2G10', 'MGAM', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'FCRL3', 'PTCHD4', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'PCDHGB3', 'TPSD1', 'DNASE1L3', 'FLG', 'GFRA2', 'C1GALT1C1L', 'IGFL2', 'SFTPD', 'GJB3', 'GPR158', 'ITPKA', 'FAM186B', 'PROC', 'ZBED2', 'GDF10', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'EGOT', 'LRRC31', 'ATP1A4', 'HCN2', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'SYT8', 'ADRA1B', 'CNGA1', 'SCGB3A1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'SLC28A3', 'PPP1R3G', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'HEPACAM2', 'METTL7B', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'ALOXE3', 'LRIT3', 'SGK2', 'GLIS1', 'ZNF843', 'S100A3', 'WNT2B', 'NR1I3', 'LINC00482', 'CCDC36', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'FCRL6', 'BCHE', 'CKMT2', 'DQX1', 'ABCA17P', 'FAM189A1', 'LPAR3', 'PITX2', 'NLRP12', 'ADCYAP1', 'CACNA1G', 'ENPP6', 'C2ORF50', 'C1ORF101', 'SLC6A20', 'FAM90A1', 'FAM95B1', 'ZNF835', 'CA3', 'CLDN9', 'OTOA', 'SPIB', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'PCSK1N', 'CLECL1', 'ULBP3', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'LINC01550', 'SCN2B', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'GSTM1', 'PCYT1B', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'CPEB1', 'JPH3', 'CAMP', 'LOC441455', 'LOC90768', 'OR7E91P', 'FLJ37201', 'RELN', 'IL12RB2', 'SCARA5', 'LBX2', 'FUT7', 'PLA2G5', 'RIMS1', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'MNX1', 'HOXB13', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'WDR72', 'BTBD8', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'LINC01124', 'HOXB8', 'RSPH4A', 'MGC16142', 'CCDC183', 'ALB', 'SCART1', 'CELF5', 'GBP1P1', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'CCDC153', 'SKIDA1', 'NIPAL1', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'NOXO1', 'PPP4R4', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'CXCR2P1', 'ULBP2', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'ORM1', 'DBIL5P', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'DEPDC4', 'SUCNR1', 'BRINP1', 'CTCFL', 'VWDE', 'BDKRB1', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'CECR2', 'RDM1', 'HCG27', 'CYP4F8', 'KIAA0319', 'CDR1', 'NUGGC', 'CLEC12A', 'PKD1L1', 'CBLN2', 'ECEL1', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'FAM184B', 'SORCS1', 'SPESP1', 'PCDHGA3', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'CHRNB2', 'COL2A1', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'TRAT1', 'GPR87', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'SLC13A2', 'CA9', 'WIPF3', 'EMX1', 'ZSCAN1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'TMEM40', 'CITED1', 'MAPT.IT1', 'GZMM', 'WFDC3', 'FIRRE', 'ROPN1L', 'ANKK1', 'M1AP', 'PVALB', 'CDHR1', 'MYO3B', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'RBM12B.AS1', 'TTC23L', 'RFX8', 'IGSF22', 'HEATR4', 'KCNT2', 'MROH7', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'MIA', 'CIDEC', 'SRSF12', 'CCBE1', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KLK6', 'KCNA6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'DHDH', 'SMC1B', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'ADGRG2', 'C9ORF47', 'TUSC5', 'TMPRSS4', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'FAM157A', 'VENTX', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'FAM19A2', 'CCNI2', 'DLX5', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'GHRLOS', 'CD160', 'PTPRR', 'ABCC2', 'OR2W3', 'RYR3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'CDKL2', 'MYO16', 'CACNA1I', 'PWAR5', 'DCX', 'DLK2', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'FKBP1AP1', 'UNC13A', 'SLC39A2', 'XCL2', 'AGBL4', 'LY6H', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'P2RY12', 'HRCT1', 'PCBP3', 'LINC00202.1', 'TM6SF2', 'ZNF727', 'ARL9', 'KCNH3', 'SNORD116.4', 'MAK', 'MPL', 'GRID2IP', 'SLC46A2', 'TCTEX1D1', 'NOX5', 'SYCE3', 'CD70', 'GPM6A', 'ELOVL3', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'PGLYRP2', 'GRIN2A', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'AGAP7P', 'LRRC43', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'KLK10', 'SCN9A', 'SCN2A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'GABRB3', 'TTYH1', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'SLC35F3', 'IL17D', 'GPR63', 'CAPSL', 'GBP6', 'MUC15', 'ANKLE1', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'FAM201A', 'HAMP', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'LOC100132215', 'MTUS2', 'RUNDC3A', 'RRN3P1', 'C1QL3', 'UCKL1.AS1', 'CYP2E1', 'CYTL1', 'FOLR1', 'PNMA6A', 'LINC00961', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'CCR10', 'KIF19', 'DPEP1', 'IL1RL1', 'GLI1', 'KISS1R', 'IL24', 'ARRDC3.AS1', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'NIPAL4', 'KIAA1210', 'PRRT4', 'RHBG', 'WBP2NL', 'A2ML1', 'GPR135', 'LOC90246', 'CBLN1', 'GNMT', 'PCDHB18P', 'DPF3', 'IL18RAP', 'CD300LB', 'B3GALT5', 'MAP7D2', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'GABRB2', 'PCDH20', 'MASP2', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'GPR171', 'ANK1', 'CD19', 'CRB2', 'KCNB1', 'SLC26A3', 'LINC01465', 'SEPHS1P1', 'HIST1H2AG', 'UCA1', 'RASAL1', 'LINC00685', 'TYMSOS', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'MED12L', 'RIC3', 'CST2', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'SEC14L1P1', 'FAM182B', 'IL6', 'EYA1', 'NRXN1', 'MYEOV', 'MAPT.AS1', 'ARHGEF33', 'RAB3B', 'STXBP6', 'KCNRG', 'CXCR2', 'MSLN', 'CR2', 'KIF4B', 'PATL2', 'TDRD9', 'AJAP1', 'ZNF676', 'CLEC4F', 'LPAR4', 'VSTM2A', 'CLDN14', 'FNDC8', 'MAGEL2', 'TRABD2A', 'ABHD1', 'NDP', 'PDCD1', 'VIT', 'FAM43B', 'POU3F1', 'TSPAN32', 'SEZ6L', 'HAPLN1', 'C9ORF117', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999036734615 Coefficient of Determination: 1.0 RMSE: 4.23817514813541e-15 NRMSE: 1.1588610786246846e-15 MAPE: 3.229450975988063e-12 Pearson Correlation: 0.21956946781621778 Spearman Correlation: 0.23543186324019008 Coefficient of Determination: -1.2735496397021575 RMSE: 0.5798822822607457 NRMSE: 0.2854214918075995 MAPE: 438.5353379639417 Predictor: ElasticNet Pearson Correlation: 0.8241258985017675 Spearman Correlation: 0.8266569759595767 Coefficient of Determination: 0.6112347817537299 RMSE: 0.29786079616252614 NRMSE: 0.08144526157036582 MAPE: 158.94931861596635 Pearson Correlation: 0.2980817651871312 Spearman Correlation: 0.2826643723737204 Coefficient of Determination: -0.07944440072007874 RMSE: 0.3995652934483195 NRMSE: 0.19666840256947213 MAPE: 294.26260480210766 Predictor: RandomForests Pearson Correlation: 0.537681357901653 Spearman Correlation: 0.5638385957840247 Coefficient of Determination: 0.22170930406628786 RMSE: 0.4214446682936855 NRMSE: 0.11523729100585026 MAPE: 215.8395649476749 Pearson Correlation: 0.29336753716695996 Spearman Correlation: 0.26913801917729646 Coefficient of Determination: 0.07651532318212473 RMSE: 0.36957489818012623 NRMSE: 0.18190695249726885 MAPE: 221.24109946492246 Fold: 5 Protein: RB1 x_train_column_count: 1002 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'PPP1R3G', 'SLC28A3', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'METTL7B', 'HEPACAM2', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'LRIT3', 'ALOXE3', 'GLIS1', 'SGK2', 'ZNF843', 'S100A3', 'LINC00482', 'NR1I3', 'CCDC36', 'WNT2B', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'BCHE', 'FCRL6', 'CKMT2', 'ABCA17P', 'LPAR3', 'DQX1', 'FAM189A1', 'PITX2', 'NLRP12', 'ADCYAP1', 'ENPP6', 'C2ORF50', 'CACNA1G', 'C1ORF101', 'SLC6A20', 'FAM95B1', 'FAM90A1', 'ZNF835', 'OTOA', 'SPIB', 'CLDN9', 'CA3', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'CLECL1', 'ULBP3', 'PCSK1N', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'SCN2B', 'LINC01550', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'PCYT1B', 'GSTM1', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'JPH3', 'CAMP', 'CPEB1', 'LOC90768', 'LOC441455', 'OR7E91P', 'FLJ37201', 'RELN', 'SCARA5', 'IL12RB2', 'LBX2', 'FUT7', 'RIMS1', 'PLA2G5', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'HOXB13', 'MNX1', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'BTBD8', 'WDR72', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'HOXB8', 'LINC01124', 'RSPH4A', 'MGC16142', 'ALB', 'CCDC183', 'SCART1', 'GBP1P1', 'CELF5', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'SKIDA1', 'CCDC153', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'NIPAL1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'PPP4R4', 'NOXO1', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'ULBP2', 'CXCR2P1', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'DBIL5P', 'ORM1', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'SUCNR1', 'DEPDC4', 'BRINP1', 'CTCFL', 'BDKRB1', 'VWDE', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'RDM1', 'CECR2', 'HCG27', 'KIAA0319', 'CYP4F8', 'CDR1', 'NUGGC', 'CLEC12A', 'ECEL1', 'PKD1L1', 'CBLN2', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'SPESP1', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'GPR87', 'TRAT1', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'WIPF3', 'SLC13A2', 'ZSCAN1', 'CA9', 'EMX1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'CITED1', 'TMEM40', 'MAPT.IT1', 'GZMM', 'ANKK1', 'WFDC3', 'ROPN1L', 'FIRRE', 'M1AP', 'CDHR1', 'MYO3B', 'PVALB', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'TTC23L', 'RBM12B.AS1', 'IGSF22', 'RFX8', 'MROH7', 'KCNT2', 'HEATR4', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'CIDEC', 'MIA', 'CCBE1', 'SRSF12', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KCNA6', 'KLK6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'SMC1B', 'DHDH', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'TUSC5', 'ADGRG2', 'TMPRSS4', 'C9ORF47', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'VENTX', 'FAM157A', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'DLX5', 'FAM19A2', 'CCNI2', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'CD160', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'OR2W3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'MYO16', 'CDKL2', 'CACNA1I', 'PWAR5', 'DLK2', 'DCX', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'SLC39A2', 'XCL2', 'LY6H', 'AGBL4', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'HRCT1', 'P2RY12', 'PCBP3', 'TM6SF2', 'LINC00202.1', 'ZNF727', 'ARL9', 'KCNH3', 'MAK', 'MPL', 'SNORD116.4', 'GRID2IP', 'SYCE3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'CD70', 'ELOVL3', 'GPM6A', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'GRIN2A', 'PGLYRP2', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'LRRC43', 'AGAP7P', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'SCN2A', 'KLK10', 'SCN9A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'TTYH1', 'GABRB3', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'IL17D', 'SLC35F3', 'GPR63', 'CAPSL', 'GBP6', 'ANKLE1', 'MUC15', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'HAMP', 'FAM201A', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'MTUS2', 'LOC100132215', 'RUNDC3A', 'RRN3P1', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'CYP2E1', 'FOLR1', 'LINC00961', 'PNMA6A', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'KIF19', 'CCR10', 'DPEP1', 'IL1RL1', 'GLI1', 'ARRDC3.AS1', 'IL24', 'KISS1R', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'KIAA1210', 'NIPAL4', 'PRRT4', 'RHBG', 'A2ML1', 'WBP2NL', 'GPR135', 'CBLN1', 'LOC90246', 'GNMT', 'DPF3', 'PCDHB18P', 'IL18RAP', 'MAP7D2', 'CD300LB', 'B3GALT5', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'MASP2', 'GABRB2', 'PCDH20', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'ANK1', 'GPR171', 'CRB2', 'KCNB1', 'CD19', 'SLC26A3', 'SEPHS1P1', 'LINC01465', 'HIST1H2AG', 'UCA1', 'RASAL1', 'TYMSOS', 'LINC00685', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'RIC3', 'CST2', 'MED12L', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'NRXN1', 'SEC14L1P1', 'FAM182B', 'EYA1', 'IL6', 'MYEOV', 'ARHGEF33', 'MAPT.AS1', 'RAB3B', 'STXBP6', 'KCNRG', 'CR2', 'CXCR2', 'MSLN', 'PATL2', 'KIF4B', 'LPAR4', 'CLEC4F', 'AJAP1', 'ZNF676', 'TDRD9', 'VSTM2A', 'CLDN14', 'FNDC8', 'MKX', 'ABHD1', 'TRABD2A', 'MAGEL2', 'NDP', 'PDCD1', 'FAM43B', 'VIT', 'POU3F1', 'TSPAN32', 'SEZ6L', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.7717222502825805e-15 NRMSE: 8.752573819588586e-16 MAPE: 7.854854678562823e-12 Pearson Correlation: -0.0010802181158532432 Spearman Correlation: 0.0904475118143618 Coefficient of Determination: -1.0912423948594134 RMSE: 0.3476014449533879 NRMSE: 0.17526241098430304 MAPE: 1526.2345238373905 Predictor: ElasticNet Pearson Correlation: 0.6113614416690005 Spearman Correlation: 0.5607853756594177 Coefficient of Determination: 0.28719482022090936 RMSE: 0.19748087702309175 NRMSE: 0.09755851707715611 MAPE: 200.7016592049539 Pearson Correlation: 0.05405049191101587 Spearman Correlation: 0.09889649496876521 Coefficient of Determination: -0.13722256011519773 RMSE: 0.25633158273777507 NRMSE: 0.1292436836908694 MAPE: 456.03080033723546 Predictor: RandomForests Pearson Correlation: 0.477964965880117 Spearman Correlation: 0.4553305543256797 Coefficient of Determination: 0.15854212824079594 RMSE: 0.21456348405503411 NRMSE: 0.10599758132970764 MAPE: 209.01467784005078 Pearson Correlation: 0.01326914745525553 Spearman Correlation: 0.061689048491876466 Coefficient of Determination: -0.13753324876753115 RMSE: 0.2563665951786866 NRMSE: 0.12926133714110008 MAPE: 352.25440346037027 Protein: CDH1 x_train_column_count: 1002 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'PPP1R3G', 'SLC28A3', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'METTL7B', 'HEPACAM2', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'LRIT3', 'ALOXE3', 'GLIS1', 'SGK2', 'ZNF843', 'S100A3', 'LINC00482', 'NR1I3', 'CCDC36', 'WNT2B', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'BCHE', 'FCRL6', 'CKMT2', 'ABCA17P', 'LPAR3', 'DQX1', 'FAM189A1', 'PITX2', 'NLRP12', 'ADCYAP1', 'ENPP6', 'C2ORF50', 'CACNA1G', 'C1ORF101', 'SLC6A20', 'FAM95B1', 'FAM90A1', 'ZNF835', 'OTOA', 'SPIB', 'CLDN9', 'CA3', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'CLECL1', 'ULBP3', 'PCSK1N', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'SCN2B', 'LINC01550', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'PCYT1B', 'GSTM1', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'JPH3', 'CAMP', 'CPEB1', 'LOC90768', 'LOC441455', 'OR7E91P', 'FLJ37201', 'RELN', 'SCARA5', 'IL12RB2', 'LBX2', 'FUT7', 'RIMS1', 'PLA2G5', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'HOXB13', 'MNX1', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'BTBD8', 'WDR72', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'HOXB8', 'LINC01124', 'RSPH4A', 'MGC16142', 'ALB', 'CCDC183', 'SCART1', 'GBP1P1', 'CELF5', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'SKIDA1', 'CCDC153', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'NIPAL1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'PPP4R4', 'NOXO1', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'ULBP2', 'CXCR2P1', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'DBIL5P', 'ORM1', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'SUCNR1', 'DEPDC4', 'BRINP1', 'CTCFL', 'BDKRB1', 'VWDE', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'RDM1', 'CECR2', 'HCG27', 'KIAA0319', 'CYP4F8', 'CDR1', 'NUGGC', 'CLEC12A', 'ECEL1', 'PKD1L1', 'CBLN2', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'SPESP1', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'GPR87', 'TRAT1', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'WIPF3', 'SLC13A2', 'ZSCAN1', 'CA9', 'EMX1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'CITED1', 'TMEM40', 'MAPT.IT1', 'GZMM', 'ANKK1', 'WFDC3', 'ROPN1L', 'FIRRE', 'M1AP', 'CDHR1', 'MYO3B', 'PVALB', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'TTC23L', 'RBM12B.AS1', 'IGSF22', 'RFX8', 'MROH7', 'KCNT2', 'HEATR4', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'CIDEC', 'MIA', 'CCBE1', 'SRSF12', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KCNA6', 'KLK6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'SMC1B', 'DHDH', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'TUSC5', 'ADGRG2', 'TMPRSS4', 'C9ORF47', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'VENTX', 'FAM157A', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'DLX5', 'FAM19A2', 'CCNI2', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'CD160', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'OR2W3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'MYO16', 'CDKL2', 'CACNA1I', 'PWAR5', 'DLK2', 'DCX', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'SLC39A2', 'XCL2', 'LY6H', 'AGBL4', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'HRCT1', 'P2RY12', 'PCBP3', 'TM6SF2', 'LINC00202.1', 'ZNF727', 'ARL9', 'KCNH3', 'MAK', 'MPL', 'SNORD116.4', 'GRID2IP', 'SYCE3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'CD70', 'ELOVL3', 'GPM6A', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'GRIN2A', 'PGLYRP2', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'LRRC43', 'AGAP7P', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'SCN2A', 'KLK10', 'SCN9A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'TTYH1', 'GABRB3', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'IL17D', 'SLC35F3', 'GPR63', 'CAPSL', 'GBP6', 'ANKLE1', 'MUC15', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'HAMP', 'FAM201A', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'MTUS2', 'LOC100132215', 'RUNDC3A', 'RRN3P1', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'CYP2E1', 'FOLR1', 'LINC00961', 'PNMA6A', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'KIF19', 'CCR10', 'DPEP1', 'IL1RL1', 'GLI1', 'ARRDC3.AS1', 'IL24', 'KISS1R', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'KIAA1210', 'NIPAL4', 'PRRT4', 'RHBG', 'A2ML1', 'WBP2NL', 'GPR135', 'CBLN1', 'LOC90246', 'GNMT', 'DPF3', 'PCDHB18P', 'IL18RAP', 'MAP7D2', 'CD300LB', 'B3GALT5', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'MASP2', 'GABRB2', 'PCDH20', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'ANK1', 'GPR171', 'CRB2', 'KCNB1', 'CD19', 'SLC26A3', 'SEPHS1P1', 'LINC01465', 'HIST1H2AG', 'UCA1', 'RASAL1', 'TYMSOS', 'LINC00685', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'RIC3', 'CST2', 'MED12L', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'NRXN1', 'SEC14L1P1', 'FAM182B', 'EYA1', 'IL6', 'MYEOV', 'ARHGEF33', 'MAPT.AS1', 'RAB3B', 'STXBP6', 'KCNRG', 'CR2', 'CXCR2', 'MSLN', 'PATL2', 'KIF4B', 'LPAR4', 'CLEC4F', 'AJAP1', 'ZNF676', 'TDRD9', 'VSTM2A', 'CLDN14', 'FNDC8', 'MKX', 'ABHD1', 'TRABD2A', 'MAGEL2', 'NDP', 'PDCD1', 'FAM43B', 'VIT', 'POU3F1', 'TSPAN32', 'SEZ6L', 'CDH1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 8.381655682278817e-15 NRMSE: 1.3346160444378866e-15 MAPE: 4.182100495126214e-12 Pearson Correlation: 0.3539298468544728 Spearman Correlation: 0.40232172470978445 Coefficient of Determination: -0.31183131042041046 RMSE: 1.330610199902288 NRMSE: 0.2616684430792488 MAPE: 1846.7902784860573 Predictor: ElasticNet Pearson Correlation: 0.9347434499038639 Spearman Correlation: 0.8859874523515984 Coefficient of Determination: 0.8386589412274148 RMSE: 0.4523128398328301 NRMSE: 0.07202204385733417 MAPE: 169.37275511307922 Pearson Correlation: 0.431935876977048 Spearman Correlation: 0.4755545580368833 Coefficient of Determination: 0.11380705045543327 RMSE: 1.093644057144094 NRMSE: 0.21506834814341783 MAPE: 1146.3138795868806 Predictor: RandomForests Pearson Correlation: 0.6843587118426794 Spearman Correlation: 0.6002063471501886 Coefficient of Determination: 0.46304727330741435 RMSE: 0.8251530152962985 NRMSE: 0.1313896078622175 MAPE: 164.77245720877224 Pearson Correlation: 0.4429403469650317 Spearman Correlation: 0.5215682509365156 Coefficient of Determination: 0.16571903971655721 RMSE: 1.061128595798193 NRMSE: 0.20867408621230518 MAPE: 491.60073707575737 Protein: CDH2 x_train_column_count: 1002 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'PPP1R3G', 'SLC28A3', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'METTL7B', 'HEPACAM2', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'LRIT3', 'ALOXE3', 'GLIS1', 'SGK2', 'ZNF843', 'S100A3', 'LINC00482', 'NR1I3', 'CCDC36', 'WNT2B', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'BCHE', 'FCRL6', 'CKMT2', 'ABCA17P', 'LPAR3', 'DQX1', 'FAM189A1', 'PITX2', 'NLRP12', 'ADCYAP1', 'ENPP6', 'C2ORF50', 'CACNA1G', 'C1ORF101', 'SLC6A20', 'FAM95B1', 'FAM90A1', 'ZNF835', 'OTOA', 'SPIB', 'CLDN9', 'CA3', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'CLECL1', 'ULBP3', 'PCSK1N', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'SCN2B', 'LINC01550', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'PCYT1B', 'GSTM1', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'JPH3', 'CAMP', 'CPEB1', 'LOC90768', 'LOC441455', 'OR7E91P', 'FLJ37201', 'RELN', 'SCARA5', 'IL12RB2', 'LBX2', 'FUT7', 'RIMS1', 'PLA2G5', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'HOXB13', 'MNX1', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'BTBD8', 'WDR72', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'HOXB8', 'LINC01124', 'RSPH4A', 'MGC16142', 'ALB', 'CCDC183', 'SCART1', 'GBP1P1', 'CELF5', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'SKIDA1', 'CCDC153', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'NIPAL1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'PPP4R4', 'NOXO1', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'ULBP2', 'CXCR2P1', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'DBIL5P', 'ORM1', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'SUCNR1', 'DEPDC4', 'BRINP1', 'CTCFL', 'BDKRB1', 'VWDE', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'RDM1', 'CECR2', 'HCG27', 'KIAA0319', 'CYP4F8', 'CDR1', 'NUGGC', 'CLEC12A', 'ECEL1', 'PKD1L1', 'CBLN2', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'SPESP1', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'GPR87', 'TRAT1', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'WIPF3', 'SLC13A2', 'ZSCAN1', 'CA9', 'EMX1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'CITED1', 'TMEM40', 'MAPT.IT1', 'GZMM', 'ANKK1', 'WFDC3', 'ROPN1L', 'FIRRE', 'M1AP', 'CDHR1', 'MYO3B', 'PVALB', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'TTC23L', 'RBM12B.AS1', 'IGSF22', 'RFX8', 'MROH7', 'KCNT2', 'HEATR4', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'CIDEC', 'MIA', 'CCBE1', 'SRSF12', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KCNA6', 'KLK6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'SMC1B', 'DHDH', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'TUSC5', 'ADGRG2', 'TMPRSS4', 'C9ORF47', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'VENTX', 'FAM157A', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'DLX5', 'FAM19A2', 'CCNI2', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'CD160', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'OR2W3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'MYO16', 'CDKL2', 'CACNA1I', 'PWAR5', 'DLK2', 'DCX', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'SLC39A2', 'XCL2', 'LY6H', 'AGBL4', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'HRCT1', 'P2RY12', 'PCBP3', 'TM6SF2', 'LINC00202.1', 'ZNF727', 'ARL9', 'KCNH3', 'MAK', 'MPL', 'SNORD116.4', 'GRID2IP', 'SYCE3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'CD70', 'ELOVL3', 'GPM6A', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'GRIN2A', 'PGLYRP2', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'LRRC43', 'AGAP7P', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'SCN2A', 'KLK10', 'SCN9A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'TTYH1', 'GABRB3', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'IL17D', 'SLC35F3', 'GPR63', 'CAPSL', 'GBP6', 'ANKLE1', 'MUC15', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'HAMP', 'FAM201A', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'MTUS2', 'LOC100132215', 'RUNDC3A', 'RRN3P1', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'CYP2E1', 'FOLR1', 'LINC00961', 'PNMA6A', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'KIF19', 'CCR10', 'DPEP1', 'IL1RL1', 'GLI1', 'ARRDC3.AS1', 'IL24', 'KISS1R', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'KIAA1210', 'NIPAL4', 'PRRT4', 'RHBG', 'A2ML1', 'WBP2NL', 'GPR135', 'CBLN1', 'LOC90246', 'GNMT', 'DPF3', 'PCDHB18P', 'IL18RAP', 'MAP7D2', 'CD300LB', 'B3GALT5', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'MASP2', 'GABRB2', 'PCDH20', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'ANK1', 'GPR171', 'CRB2', 'KCNB1', 'CD19', 'SLC26A3', 'SEPHS1P1', 'LINC01465', 'HIST1H2AG', 'UCA1', 'RASAL1', 'TYMSOS', 'LINC00685', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'RIC3', 'CST2', 'MED12L', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'NRXN1', 'SEC14L1P1', 'FAM182B', 'EYA1', 'IL6', 'MYEOV', 'ARHGEF33', 'MAPT.AS1', 'RAB3B', 'STXBP6', 'KCNRG', 'CR2', 'CXCR2', 'MSLN', 'PATL2', 'KIF4B', 'LPAR4', 'CLEC4F', 'AJAP1', 'ZNF676', 'TDRD9', 'VSTM2A', 'CLDN14', 'FNDC8', 'MKX', 'ABHD1', 'TRABD2A', 'MAGEL2', 'NDP', 'PDCD1', 'FAM43B', 'VIT', 'POU3F1', 'TSPAN32', 'SEZ6L', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 1.7419698490533614e-15 NRMSE: 8.555423844866958e-16 MAPE: 8.088969890895447e-12 Pearson Correlation: 0.12552550333581908 Spearman Correlation: 0.1552914067401134 Coefficient of Determination: -0.6525272389883088 RMSE: 0.5361739743877084 NRMSE: 0.20050258003018095 MAPE: 13698.30857897804 Predictor: ElasticNet Pearson Correlation: 0.7301355603017254 Spearman Correlation: 0.7284543736640476 Coefficient of Determination: 0.43584527864555533 RMSE: 0.2697481945259396 NRMSE: 0.1324827830292911 MAPE: 1395.149818740094 Pearson Correlation: 0.0979384937350235 Spearman Correlation: 0.11504147812510113 Coefficient of Determination: -0.053750312103989284 RMSE: 0.4281542649173431 NRMSE: 0.16010854474032613 MAPE: 1086.4472141183605 Predictor: RandomForests Pearson Correlation: 0.46530176220656727 Spearman Correlation: 0.48086762314037795 Coefficient of Determination: 0.14761474954563003 RMSE: 0.3315716542924947 NRMSE: 0.16284644874637524 MAPE: 934.2204623881886 Pearson Correlation: 0.0991049186114541 Spearman Correlation: 0.14083484935589866 Coefficient of Determination: -0.004633828790130634 RMSE: 0.41805682249167586 NRMSE: 0.1563326000754168 MAPE: 2082.0659896225466 Protein: CDH3 x_train_column_count: 1002 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'PPP1R3G', 'SLC28A3', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'METTL7B', 'HEPACAM2', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'LRIT3', 'ALOXE3', 'GLIS1', 'SGK2', 'ZNF843', 'S100A3', 'LINC00482', 'NR1I3', 'CCDC36', 'WNT2B', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'BCHE', 'FCRL6', 'CKMT2', 'ABCA17P', 'LPAR3', 'DQX1', 'FAM189A1', 'PITX2', 'NLRP12', 'ADCYAP1', 'ENPP6', 'C2ORF50', 'CACNA1G', 'C1ORF101', 'SLC6A20', 'FAM95B1', 'FAM90A1', 'ZNF835', 'OTOA', 'SPIB', 'CLDN9', 'CA3', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'CLECL1', 'ULBP3', 'PCSK1N', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'SCN2B', 'LINC01550', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'PCYT1B', 'GSTM1', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'JPH3', 'CAMP', 'CPEB1', 'LOC90768', 'LOC441455', 'OR7E91P', 'FLJ37201', 'RELN', 'SCARA5', 'IL12RB2', 'LBX2', 'FUT7', 'RIMS1', 'PLA2G5', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'HOXB13', 'MNX1', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'BTBD8', 'WDR72', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'HOXB8', 'LINC01124', 'RSPH4A', 'MGC16142', 'ALB', 'CCDC183', 'SCART1', 'GBP1P1', 'CELF5', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'SKIDA1', 'CCDC153', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'NIPAL1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'PPP4R4', 'NOXO1', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'ULBP2', 'CXCR2P1', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'DBIL5P', 'ORM1', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'SUCNR1', 'DEPDC4', 'BRINP1', 'CTCFL', 'BDKRB1', 'VWDE', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'RDM1', 'CECR2', 'HCG27', 'KIAA0319', 'CYP4F8', 'CDR1', 'NUGGC', 'CLEC12A', 'ECEL1', 'PKD1L1', 'CBLN2', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'SPESP1', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'GPR87', 'TRAT1', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'WIPF3', 'SLC13A2', 'ZSCAN1', 'CA9', 'EMX1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'CITED1', 'TMEM40', 'MAPT.IT1', 'GZMM', 'ANKK1', 'WFDC3', 'ROPN1L', 'FIRRE', 'M1AP', 'CDHR1', 'MYO3B', 'PVALB', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'TTC23L', 'RBM12B.AS1', 'IGSF22', 'RFX8', 'MROH7', 'KCNT2', 'HEATR4', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'CIDEC', 'MIA', 'CCBE1', 'SRSF12', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KCNA6', 'KLK6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'SMC1B', 'DHDH', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'TUSC5', 'ADGRG2', 'TMPRSS4', 'C9ORF47', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'VENTX', 'FAM157A', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'DLX5', 'FAM19A2', 'CCNI2', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'CD160', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'OR2W3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'MYO16', 'CDKL2', 'CACNA1I', 'PWAR5', 'DLK2', 'DCX', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'SLC39A2', 'XCL2', 'LY6H', 'AGBL4', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'HRCT1', 'P2RY12', 'PCBP3', 'TM6SF2', 'LINC00202.1', 'ZNF727', 'ARL9', 'KCNH3', 'MAK', 'MPL', 'SNORD116.4', 'GRID2IP', 'SYCE3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'CD70', 'ELOVL3', 'GPM6A', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'GRIN2A', 'PGLYRP2', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'LRRC43', 'AGAP7P', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'SCN2A', 'KLK10', 'SCN9A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'TTYH1', 'GABRB3', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'IL17D', 'SLC35F3', 'GPR63', 'CAPSL', 'GBP6', 'ANKLE1', 'MUC15', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'HAMP', 'FAM201A', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'MTUS2', 'LOC100132215', 'RUNDC3A', 'RRN3P1', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'CYP2E1', 'FOLR1', 'LINC00961', 'PNMA6A', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'KIF19', 'CCR10', 'DPEP1', 'IL1RL1', 'GLI1', 'ARRDC3.AS1', 'IL24', 'KISS1R', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'KIAA1210', 'NIPAL4', 'PRRT4', 'RHBG', 'A2ML1', 'WBP2NL', 'GPR135', 'CBLN1', 'LOC90246', 'GNMT', 'DPF3', 'PCDHB18P', 'IL18RAP', 'MAP7D2', 'CD300LB', 'B3GALT5', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'MASP2', 'GABRB2', 'PCDH20', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'ANK1', 'GPR171', 'CRB2', 'KCNB1', 'CD19', 'SLC26A3', 'SEPHS1P1', 'LINC01465', 'HIST1H2AG', 'UCA1', 'RASAL1', 'TYMSOS', 'LINC00685', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'RIC3', 'CST2', 'MED12L', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'NRXN1', 'SEC14L1P1', 'FAM182B', 'EYA1', 'IL6', 'MYEOV', 'ARHGEF33', 'MAPT.AS1', 'RAB3B', 'STXBP6', 'KCNRG', 'CR2', 'CXCR2', 'MSLN', 'PATL2', 'KIF4B', 'LPAR4', 'CLEC4F', 'AJAP1', 'ZNF676', 'TDRD9', 'VSTM2A', 'CLDN14', 'FNDC8', 'MKX', 'ABHD1', 'TRABD2A', 'MAGEL2', 'NDP', 'PDCD1', 'FAM43B', 'VIT', 'POU3F1', 'TSPAN32', 'SEZ6L', 'CDH3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.1010172847211209e-15 NRMSE: 7.724485636759282e-16 MAPE: 4.528134254868401e-12 Pearson Correlation: 0.11557270566138515 Spearman Correlation: 0.08417810695893965 Coefficient of Determination: -0.9559147008612843 RMSE: 0.3124228928348778 NRMSE: 0.28187090539871146 MAPE: 496.87220545032875 Predictor: ElasticNet Pearson Correlation: 0.6158791078119158 Spearman Correlation: 0.6325942756954454 Coefficient of Determination: 0.3352529252023333 RMSE: 0.1661360004219417 NRMSE: 0.11655722092800536 MAPE: 355.68608261944894 Pearson Correlation: 0.4572031523336371 Spearman Correlation: 0.47150961982069606 Coefficient of Determination: 0.18090049556346055 RMSE: 0.2021790844285917 NRMSE: 0.18240789291548254 MAPE: 255.47236398705672 Predictor: RandomForests Pearson Correlation: 0.5654543017893553 Spearman Correlation: 0.5906108175431505 Coefficient of Determination: 0.2554447219221646 RMSE: 0.17582636872165666 NRMSE: 0.12335576185781603 MAPE: 438.3632544111074 Pearson Correlation: 0.4400110438063352 Spearman Correlation: 0.4544520505243208 Coefficient of Determination: 0.15361714746977684 RMSE: 0.20551868949813124 NRMSE: 0.1854209163725144 MAPE: 180.76898129440505 Protein: PTEN x_train_column_count: 1002 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'PPP1R3G', 'SLC28A3', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'METTL7B', 'HEPACAM2', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'LRIT3', 'ALOXE3', 'GLIS1', 'SGK2', 'ZNF843', 'S100A3', 'LINC00482', 'NR1I3', 'CCDC36', 'WNT2B', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'BCHE', 'FCRL6', 'CKMT2', 'ABCA17P', 'LPAR3', 'DQX1', 'FAM189A1', 'PITX2', 'NLRP12', 'ADCYAP1', 'ENPP6', 'C2ORF50', 'CACNA1G', 'C1ORF101', 'SLC6A20', 'FAM95B1', 'FAM90A1', 'ZNF835', 'OTOA', 'SPIB', 'CLDN9', 'CA3', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'CLECL1', 'ULBP3', 'PCSK1N', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'SCN2B', 'LINC01550', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'PCYT1B', 'GSTM1', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'JPH3', 'CAMP', 'CPEB1', 'LOC90768', 'LOC441455', 'OR7E91P', 'FLJ37201', 'RELN', 'SCARA5', 'IL12RB2', 'LBX2', 'FUT7', 'RIMS1', 'PLA2G5', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'HOXB13', 'MNX1', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'BTBD8', 'WDR72', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'HOXB8', 'LINC01124', 'RSPH4A', 'MGC16142', 'ALB', 'CCDC183', 'SCART1', 'GBP1P1', 'CELF5', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'SKIDA1', 'CCDC153', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'NIPAL1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'PPP4R4', 'NOXO1', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'ULBP2', 'CXCR2P1', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'DBIL5P', 'ORM1', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'SUCNR1', 'DEPDC4', 'BRINP1', 'CTCFL', 'BDKRB1', 'VWDE', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'RDM1', 'CECR2', 'HCG27', 'KIAA0319', 'CYP4F8', 'CDR1', 'NUGGC', 'CLEC12A', 'ECEL1', 'PKD1L1', 'CBLN2', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'SPESP1', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'GPR87', 'TRAT1', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'WIPF3', 'SLC13A2', 'ZSCAN1', 'CA9', 'EMX1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'CITED1', 'TMEM40', 'MAPT.IT1', 'GZMM', 'ANKK1', 'WFDC3', 'ROPN1L', 'FIRRE', 'M1AP', 'CDHR1', 'MYO3B', 'PVALB', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'TTC23L', 'RBM12B.AS1', 'IGSF22', 'RFX8', 'MROH7', 'KCNT2', 'HEATR4', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'CIDEC', 'MIA', 'CCBE1', 'SRSF12', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KCNA6', 'KLK6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'SMC1B', 'DHDH', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'TUSC5', 'ADGRG2', 'TMPRSS4', 'C9ORF47', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'VENTX', 'FAM157A', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'DLX5', 'FAM19A2', 'CCNI2', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'CD160', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'OR2W3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'MYO16', 'CDKL2', 'CACNA1I', 'PWAR5', 'DLK2', 'DCX', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'SLC39A2', 'XCL2', 'LY6H', 'AGBL4', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'HRCT1', 'P2RY12', 'PCBP3', 'TM6SF2', 'LINC00202.1', 'ZNF727', 'ARL9', 'KCNH3', 'MAK', 'MPL', 'SNORD116.4', 'GRID2IP', 'SYCE3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'CD70', 'ELOVL3', 'GPM6A', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'GRIN2A', 'PGLYRP2', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'LRRC43', 'AGAP7P', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'SCN2A', 'KLK10', 'SCN9A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'TTYH1', 'GABRB3', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'IL17D', 'SLC35F3', 'GPR63', 'CAPSL', 'GBP6', 'ANKLE1', 'MUC15', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'HAMP', 'FAM201A', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'MTUS2', 'LOC100132215', 'RUNDC3A', 'RRN3P1', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'CYP2E1', 'FOLR1', 'LINC00961', 'PNMA6A', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'KIF19', 'CCR10', 'DPEP1', 'IL1RL1', 'GLI1', 'ARRDC3.AS1', 'IL24', 'KISS1R', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'KIAA1210', 'NIPAL4', 'PRRT4', 'RHBG', 'A2ML1', 'WBP2NL', 'GPR135', 'CBLN1', 'LOC90246', 'GNMT', 'DPF3', 'PCDHB18P', 'IL18RAP', 'MAP7D2', 'CD300LB', 'B3GALT5', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'MASP2', 'GABRB2', 'PCDH20', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'ANK1', 'GPR171', 'CRB2', 'KCNB1', 'CD19', 'SLC26A3', 'SEPHS1P1', 'LINC01465', 'HIST1H2AG', 'UCA1', 'RASAL1', 'TYMSOS', 'LINC00685', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'RIC3', 'CST2', 'MED12L', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'NRXN1', 'SEC14L1P1', 'FAM182B', 'EYA1', 'IL6', 'MYEOV', 'ARHGEF33', 'MAPT.AS1', 'RAB3B', 'STXBP6', 'KCNRG', 'CR2', 'CXCR2', 'MSLN', 'PATL2', 'KIF4B', 'LPAR4', 'CLEC4F', 'AJAP1', 'ZNF676', 'TDRD9', 'VSTM2A', 'CLDN14', 'FNDC8', 'MKX', 'ABHD1', 'TRABD2A', 'MAGEL2', 'NDP', 'PDCD1', 'FAM43B', 'VIT', 'POU3F1', 'TSPAN32', 'SEZ6L', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.918890445620139e-15 NRMSE: 6.127574772293237e-16 MAPE: 4.245916648715254e-12 Pearson Correlation: 0.09148066845536759 Spearman Correlation: 0.14294193194428859 Coefficient of Determination: -0.8151794270578201 RMSE: 0.972342381949968 NRMSE: 0.1880885139952739 MAPE: 1475.0294973228233 Predictor: ElasticNet Pearson Correlation: 0.8541466659511499 Spearman Correlation: 0.8197524801096304 Coefficient of Determination: 0.6231696120382615 RMSE: 0.3493061820366473 NRMSE: 0.054617493868602505 MAPE: 248.84556331384883 Pearson Correlation: 0.23948063045283585 Spearman Correlation: 0.27309816830633804 Coefficient of Determination: 0.002773883614405115 RMSE: 0.7207028799046241 NRMSE: 0.13941173009606625 MAPE: 866.2616558498823 Predictor: RandomForests Pearson Correlation: 0.5420510260589448 Spearman Correlation: 0.5271409833991236 Coefficient of Determination: 0.1507065958228897 RMSE: 0.5243994032099759 NRMSE: 0.08199505952778921 MAPE: 340.672885067221 Pearson Correlation: 0.2928066749176732 Spearman Correlation: 0.3692041047893365 Coefficient of Determination: 0.04782093057787906 RMSE: 0.7042368575884711 NRMSE: 0.136226566385885 MAPE: 498.1120057545482 Protein: BRCA2 x_train_column_count: 1002 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'PPP1R3G', 'SLC28A3', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'METTL7B', 'HEPACAM2', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'LRIT3', 'ALOXE3', 'GLIS1', 'SGK2', 'ZNF843', 'S100A3', 'LINC00482', 'NR1I3', 'CCDC36', 'WNT2B', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'BCHE', 'FCRL6', 'CKMT2', 'ABCA17P', 'LPAR3', 'DQX1', 'FAM189A1', 'PITX2', 'NLRP12', 'ADCYAP1', 'ENPP6', 'C2ORF50', 'CACNA1G', 'C1ORF101', 'SLC6A20', 'FAM95B1', 'FAM90A1', 'ZNF835', 'OTOA', 'SPIB', 'CLDN9', 'CA3', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'CLECL1', 'ULBP3', 'PCSK1N', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'SCN2B', 'LINC01550', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'PCYT1B', 'GSTM1', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'JPH3', 'CAMP', 'CPEB1', 'LOC90768', 'LOC441455', 'OR7E91P', 'FLJ37201', 'RELN', 'SCARA5', 'IL12RB2', 'LBX2', 'FUT7', 'RIMS1', 'PLA2G5', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'HOXB13', 'MNX1', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'BTBD8', 'WDR72', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'HOXB8', 'LINC01124', 'RSPH4A', 'MGC16142', 'ALB', 'CCDC183', 'SCART1', 'GBP1P1', 'CELF5', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'SKIDA1', 'CCDC153', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'NIPAL1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'PPP4R4', 'NOXO1', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'ULBP2', 'CXCR2P1', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'DBIL5P', 'ORM1', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'SUCNR1', 'DEPDC4', 'BRINP1', 'CTCFL', 'BDKRB1', 'VWDE', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'RDM1', 'CECR2', 'HCG27', 'KIAA0319', 'CYP4F8', 'CDR1', 'NUGGC', 'CLEC12A', 'ECEL1', 'PKD1L1', 'CBLN2', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'SPESP1', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'GPR87', 'TRAT1', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'WIPF3', 'SLC13A2', 'ZSCAN1', 'CA9', 'EMX1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'CITED1', 'TMEM40', 'MAPT.IT1', 'GZMM', 'ANKK1', 'WFDC3', 'ROPN1L', 'FIRRE', 'M1AP', 'CDHR1', 'MYO3B', 'PVALB', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'TTC23L', 'RBM12B.AS1', 'IGSF22', 'RFX8', 'MROH7', 'KCNT2', 'HEATR4', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'CIDEC', 'MIA', 'CCBE1', 'SRSF12', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KCNA6', 'KLK6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'SMC1B', 'DHDH', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'TUSC5', 'ADGRG2', 'TMPRSS4', 'C9ORF47', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'VENTX', 'FAM157A', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'DLX5', 'FAM19A2', 'CCNI2', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'CD160', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'OR2W3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'MYO16', 'CDKL2', 'CACNA1I', 'PWAR5', 'DLK2', 'DCX', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'SLC39A2', 'XCL2', 'LY6H', 'AGBL4', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'HRCT1', 'P2RY12', 'PCBP3', 'TM6SF2', 'LINC00202.1', 'ZNF727', 'ARL9', 'KCNH3', 'MAK', 'MPL', 'SNORD116.4', 'GRID2IP', 'SYCE3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'CD70', 'ELOVL3', 'GPM6A', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'GRIN2A', 'PGLYRP2', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'LRRC43', 'AGAP7P', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'SCN2A', 'KLK10', 'SCN9A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'TTYH1', 'GABRB3', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'IL17D', 'SLC35F3', 'GPR63', 'CAPSL', 'GBP6', 'ANKLE1', 'MUC15', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'HAMP', 'FAM201A', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'MTUS2', 'LOC100132215', 'RUNDC3A', 'RRN3P1', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'CYP2E1', 'FOLR1', 'LINC00961', 'PNMA6A', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'KIF19', 'CCR10', 'DPEP1', 'IL1RL1', 'GLI1', 'ARRDC3.AS1', 'IL24', 'KISS1R', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'KIAA1210', 'NIPAL4', 'PRRT4', 'RHBG', 'A2ML1', 'WBP2NL', 'GPR135', 'CBLN1', 'LOC90246', 'GNMT', 'DPF3', 'PCDHB18P', 'IL18RAP', 'MAP7D2', 'CD300LB', 'B3GALT5', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'MASP2', 'GABRB2', 'PCDH20', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'ANK1', 'GPR171', 'CRB2', 'KCNB1', 'CD19', 'SLC26A3', 'SEPHS1P1', 'LINC01465', 'HIST1H2AG', 'UCA1', 'RASAL1', 'TYMSOS', 'LINC00685', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'RIC3', 'CST2', 'MED12L', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'NRXN1', 'SEC14L1P1', 'FAM182B', 'EYA1', 'IL6', 'MYEOV', 'ARHGEF33', 'MAPT.AS1', 'RAB3B', 'STXBP6', 'KCNRG', 'CR2', 'CXCR2', 'MSLN', 'PATL2', 'KIF4B', 'LPAR4', 'CLEC4F', 'AJAP1', 'ZNF676', 'TDRD9', 'VSTM2A', 'CLDN14', 'FNDC8', 'MKX', 'ABHD1', 'TRABD2A', 'MAGEL2', 'NDP', 'PDCD1', 'FAM43B', 'VIT', 'POU3F1', 'TSPAN32', 'SEZ6L', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999884408153 Coefficient of Determination: 1.0 RMSE: 1.5891227433476206e-15 NRMSE: 1.023754384504829e-15 MAPE: 3.247909992380513e-12 Pearson Correlation: -0.0877533071735406 Spearman Correlation: -0.08711579944887093 Coefficient of Determination: -2.2094392648207104 RMSE: 0.2975443252727399 NRMSE: 0.389124861404224 MAPE: 664.5907441712083 Predictor: ElasticNet Pearson Correlation: 0.6143738910265654 Spearman Correlation: 0.5929219408981973 Coefficient of Determination: 0.2875543768236598 RMSE: 0.16920817994382784 NRMSE: 0.1090083298075876 MAPE: 135.34357207703894 Pearson Correlation: 0.245374099688758 Spearman Correlation: 0.21154129103854166 Coefficient of Determination: -0.016292142255694753 RMSE: 0.16743504953494945 NRMSE: 0.21896952793428293 MAPE: 213.47664180895313 Predictor: RandomForests Pearson Correlation: 0.533661627385237 Spearman Correlation: 0.5232015968937574 Coefficient of Determination: 0.16143945927120218 RMSE: 0.18357464790142433 NRMSE: 0.1182635837664193 MAPE: 130.67648613677676 Pearson Correlation: 0.17975518401678828 Spearman Correlation: 0.12709634783476106 Coefficient of Determination: -0.04851802874951616 RMSE: 0.17006895464926552 NRMSE: 0.22241411711144382 MAPE: 176.8897660417466 Protein: CDKN2A x_train_column_count: 1002 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'PPP1R3G', 'SLC28A3', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'METTL7B', 'HEPACAM2', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'LRIT3', 'ALOXE3', 'GLIS1', 'SGK2', 'ZNF843', 'S100A3', 'LINC00482', 'NR1I3', 'CCDC36', 'WNT2B', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'BCHE', 'FCRL6', 'CKMT2', 'ABCA17P', 'LPAR3', 'DQX1', 'FAM189A1', 'PITX2', 'NLRP12', 'ADCYAP1', 'ENPP6', 'C2ORF50', 'CACNA1G', 'C1ORF101', 'SLC6A20', 'FAM95B1', 'FAM90A1', 'ZNF835', 'OTOA', 'SPIB', 'CLDN9', 'CA3', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'CLECL1', 'ULBP3', 'PCSK1N', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'SCN2B', 'LINC01550', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'PCYT1B', 'GSTM1', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'JPH3', 'CAMP', 'CPEB1', 'LOC90768', 'LOC441455', 'OR7E91P', 'FLJ37201', 'RELN', 'SCARA5', 'IL12RB2', 'LBX2', 'FUT7', 'RIMS1', 'PLA2G5', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'HOXB13', 'MNX1', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'BTBD8', 'WDR72', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'HOXB8', 'LINC01124', 'RSPH4A', 'MGC16142', 'ALB', 'CCDC183', 'SCART1', 'GBP1P1', 'CELF5', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'SKIDA1', 'CCDC153', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'NIPAL1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'PPP4R4', 'NOXO1', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'ULBP2', 'CXCR2P1', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'DBIL5P', 'ORM1', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'SUCNR1', 'DEPDC4', 'BRINP1', 'CTCFL', 'BDKRB1', 'VWDE', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'RDM1', 'CECR2', 'HCG27', 'KIAA0319', 'CYP4F8', 'CDR1', 'NUGGC', 'CLEC12A', 'ECEL1', 'PKD1L1', 'CBLN2', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'SPESP1', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'GPR87', 'TRAT1', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'WIPF3', 'SLC13A2', 'ZSCAN1', 'CA9', 'EMX1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'CITED1', 'TMEM40', 'MAPT.IT1', 'GZMM', 'ANKK1', 'WFDC3', 'ROPN1L', 'FIRRE', 'M1AP', 'CDHR1', 'MYO3B', 'PVALB', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'TTC23L', 'RBM12B.AS1', 'IGSF22', 'RFX8', 'MROH7', 'KCNT2', 'HEATR4', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'CIDEC', 'MIA', 'CCBE1', 'SRSF12', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KCNA6', 'KLK6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'SMC1B', 'DHDH', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'TUSC5', 'ADGRG2', 'TMPRSS4', 'C9ORF47', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'VENTX', 'FAM157A', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'DLX5', 'FAM19A2', 'CCNI2', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'CD160', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'OR2W3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'MYO16', 'CDKL2', 'CACNA1I', 'PWAR5', 'DLK2', 'DCX', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'SLC39A2', 'XCL2', 'LY6H', 'AGBL4', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'HRCT1', 'P2RY12', 'PCBP3', 'TM6SF2', 'LINC00202.1', 'ZNF727', 'ARL9', 'KCNH3', 'MAK', 'MPL', 'SNORD116.4', 'GRID2IP', 'SYCE3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'CD70', 'ELOVL3', 'GPM6A', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'GRIN2A', 'PGLYRP2', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'LRRC43', 'AGAP7P', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'SCN2A', 'KLK10', 'SCN9A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'TTYH1', 'GABRB3', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'IL17D', 'SLC35F3', 'GPR63', 'CAPSL', 'GBP6', 'ANKLE1', 'MUC15', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'HAMP', 'FAM201A', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'MTUS2', 'LOC100132215', 'RUNDC3A', 'RRN3P1', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'CYP2E1', 'FOLR1', 'LINC00961', 'PNMA6A', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'KIF19', 'CCR10', 'DPEP1', 'IL1RL1', 'GLI1', 'ARRDC3.AS1', 'IL24', 'KISS1R', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'KIAA1210', 'NIPAL4', 'PRRT4', 'RHBG', 'A2ML1', 'WBP2NL', 'GPR135', 'CBLN1', 'LOC90246', 'GNMT', 'DPF3', 'PCDHB18P', 'IL18RAP', 'MAP7D2', 'CD300LB', 'B3GALT5', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'MASP2', 'GABRB2', 'PCDH20', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'ANK1', 'GPR171', 'CRB2', 'KCNB1', 'CD19', 'SLC26A3', 'SEPHS1P1', 'LINC01465', 'HIST1H2AG', 'UCA1', 'RASAL1', 'TYMSOS', 'LINC00685', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'RIC3', 'CST2', 'MED12L', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'NRXN1', 'SEC14L1P1', 'FAM182B', 'EYA1', 'IL6', 'MYEOV', 'ARHGEF33', 'MAPT.AS1', 'RAB3B', 'STXBP6', 'KCNRG', 'CR2', 'CXCR2', 'MSLN', 'PATL2', 'KIF4B', 'LPAR4', 'CLEC4F', 'AJAP1', 'ZNF676', 'TDRD9', 'VSTM2A', 'CLDN14', 'FNDC8', 'MKX', 'ABHD1', 'TRABD2A', 'MAGEL2', 'NDP', 'PDCD1', 'FAM43B', 'VIT', 'POU3F1', 'TSPAN32', 'SEZ6L', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.0971918233212336e-15 NRMSE: 7.886714938049028e-16 MAPE: 3.232226397375204e-12 Pearson Correlation: 0.19745474195306983 Spearman Correlation: 0.1892567238993005 Coefficient of Determination: -0.7869345350226746 RMSE: 0.8100106658777052 NRMSE: 0.20382241661702152 MAPE: 669.4277631848685 Predictor: ElasticNet Pearson Correlation: 0.8856221718552838 Spearman Correlation: 0.8709096526854354 Coefficient of Determination: 0.7362878338449717 RMSE: 0.34903931203702 NRMSE: 0.08887965980927912 MAPE: 274.42770354231567 Pearson Correlation: 0.2935725322046767 Spearman Correlation: 0.28162196536116413 Coefficient of Determination: -0.0452848008823028 RMSE: 0.6195177216832094 NRMSE: 0.15588881046858644 MAPE: 384.478454842666 Predictor: RandomForests Pearson Correlation: 0.6019743658574821 Spearman Correlation: 0.5682279323223622 Coefficient of Determination: 0.3147274835148697 RMSE: 0.5626533618421469 NRMSE: 0.14327451856131673 MAPE: 183.24148346349392 Pearson Correlation: 0.18067418991605372 Spearman Correlation: 0.1672813875484732 Coefficient of Determination: -0.018541468390731897 RMSE: 0.6115412745628782 NRMSE: 0.15388170266547851 MAPE: 254.10003738169445 Protein: TP53 x_train_column_count: 1002 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'PPP1R3G', 'SLC28A3', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'METTL7B', 'HEPACAM2', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'LRIT3', 'ALOXE3', 'GLIS1', 'SGK2', 'ZNF843', 'S100A3', 'LINC00482', 'NR1I3', 'CCDC36', 'WNT2B', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'BCHE', 'FCRL6', 'CKMT2', 'ABCA17P', 'LPAR3', 'DQX1', 'FAM189A1', 'PITX2', 'NLRP12', 'ADCYAP1', 'ENPP6', 'C2ORF50', 'CACNA1G', 'C1ORF101', 'SLC6A20', 'FAM95B1', 'FAM90A1', 'ZNF835', 'OTOA', 'SPIB', 'CLDN9', 'CA3', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'CLECL1', 'ULBP3', 'PCSK1N', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'SCN2B', 'LINC01550', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'PCYT1B', 'GSTM1', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'JPH3', 'CAMP', 'CPEB1', 'LOC90768', 'LOC441455', 'OR7E91P', 'FLJ37201', 'RELN', 'SCARA5', 'IL12RB2', 'LBX2', 'FUT7', 'RIMS1', 'PLA2G5', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'HOXB13', 'MNX1', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'BTBD8', 'WDR72', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'HOXB8', 'LINC01124', 'RSPH4A', 'MGC16142', 'ALB', 'CCDC183', 'SCART1', 'GBP1P1', 'CELF5', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'SKIDA1', 'CCDC153', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'NIPAL1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'PPP4R4', 'NOXO1', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'ULBP2', 'CXCR2P1', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'DBIL5P', 'ORM1', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'SUCNR1', 'DEPDC4', 'BRINP1', 'CTCFL', 'BDKRB1', 'VWDE', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'RDM1', 'CECR2', 'HCG27', 'KIAA0319', 'CYP4F8', 'CDR1', 'NUGGC', 'CLEC12A', 'ECEL1', 'PKD1L1', 'CBLN2', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'SPESP1', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'GPR87', 'TRAT1', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'WIPF3', 'SLC13A2', 'ZSCAN1', 'CA9', 'EMX1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'CITED1', 'TMEM40', 'MAPT.IT1', 'GZMM', 'ANKK1', 'WFDC3', 'ROPN1L', 'FIRRE', 'M1AP', 'CDHR1', 'MYO3B', 'PVALB', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'TTC23L', 'RBM12B.AS1', 'IGSF22', 'RFX8', 'MROH7', 'KCNT2', 'HEATR4', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'CIDEC', 'MIA', 'CCBE1', 'SRSF12', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KCNA6', 'KLK6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'SMC1B', 'DHDH', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'TUSC5', 'ADGRG2', 'TMPRSS4', 'C9ORF47', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'VENTX', 'FAM157A', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'DLX5', 'FAM19A2', 'CCNI2', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'CD160', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'OR2W3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'MYO16', 'CDKL2', 'CACNA1I', 'PWAR5', 'DLK2', 'DCX', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'SLC39A2', 'XCL2', 'LY6H', 'AGBL4', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'HRCT1', 'P2RY12', 'PCBP3', 'TM6SF2', 'LINC00202.1', 'ZNF727', 'ARL9', 'KCNH3', 'MAK', 'MPL', 'SNORD116.4', 'GRID2IP', 'SYCE3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'CD70', 'ELOVL3', 'GPM6A', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'GRIN2A', 'PGLYRP2', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'LRRC43', 'AGAP7P', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'SCN2A', 'KLK10', 'SCN9A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'TTYH1', 'GABRB3', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'IL17D', 'SLC35F3', 'GPR63', 'CAPSL', 'GBP6', 'ANKLE1', 'MUC15', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'HAMP', 'FAM201A', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'MTUS2', 'LOC100132215', 'RUNDC3A', 'RRN3P1', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'CYP2E1', 'FOLR1', 'LINC00961', 'PNMA6A', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'KIF19', 'CCR10', 'DPEP1', 'IL1RL1', 'GLI1', 'ARRDC3.AS1', 'IL24', 'KISS1R', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'KIAA1210', 'NIPAL4', 'PRRT4', 'RHBG', 'A2ML1', 'WBP2NL', 'GPR135', 'CBLN1', 'LOC90246', 'GNMT', 'DPF3', 'PCDHB18P', 'IL18RAP', 'MAP7D2', 'CD300LB', 'B3GALT5', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'MASP2', 'GABRB2', 'PCDH20', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'ANK1', 'GPR171', 'CRB2', 'KCNB1', 'CD19', 'SLC26A3', 'SEPHS1P1', 'LINC01465', 'HIST1H2AG', 'UCA1', 'RASAL1', 'TYMSOS', 'LINC00685', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'RIC3', 'CST2', 'MED12L', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'NRXN1', 'SEC14L1P1', 'FAM182B', 'EYA1', 'IL6', 'MYEOV', 'ARHGEF33', 'MAPT.AS1', 'RAB3B', 'STXBP6', 'KCNRG', 'CR2', 'CXCR2', 'MSLN', 'PATL2', 'KIF4B', 'LPAR4', 'CLEC4F', 'AJAP1', 'ZNF676', 'TDRD9', 'VSTM2A', 'CLDN14', 'FNDC8', 'MKX', 'ABHD1', 'TRABD2A', 'MAGEL2', 'NDP', 'PDCD1', 'FAM43B', 'VIT', 'POU3F1', 'TSPAN32', 'SEZ6L', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.5206345020460146e-15 NRMSE: 6.410728914891057e-16 MAPE: 4.667808305075573e-12 Pearson Correlation: 0.22242447495004117 Spearman Correlation: 0.19266325016521402 Coefficient of Determination: -0.40021388033990646 RMSE: 0.6249582593151871 NRMSE: 0.16739206088527847 MAPE: 316.7157757170287 Predictor: ElasticNet Pearson Correlation: 0.7791256992211404 Spearman Correlation: 0.731323412137043 Coefficient of Determination: 0.5522352926474181 RMSE: 0.28358198723594696 NRMSE: 0.07212339765404689 MAPE: 850.1267951210309 Pearson Correlation: 0.4362440612061021 Spearman Correlation: 0.4012743301038667 Coefficient of Determination: 0.18801390326898904 RMSE: 0.4759136039680115 NRMSE: 0.12747116752859555 MAPE: 205.43325812860155 Predictor: RandomForests Pearson Correlation: 0.515307760679544 Spearman Correlation: 0.5438436190356488 Coefficient of Determination: 0.23864448682466244 RMSE: 0.3697834416405663 NRMSE: 0.09404701076847487 MAPE: 860.64858674498 Pearson Correlation: 0.43566242762905866 Spearman Correlation: 0.4369755233855784 Coefficient of Determination: 0.1631633643980812 RMSE: 0.4831413017528265 NRMSE: 0.12940707158238288 MAPE: 169.4269332274583 Protein: CTNNB1 x_train_column_count: 1002 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'PPP1R3G', 'SLC28A3', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'METTL7B', 'HEPACAM2', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'LRIT3', 'ALOXE3', 'GLIS1', 'SGK2', 'ZNF843', 'S100A3', 'LINC00482', 'NR1I3', 'CCDC36', 'WNT2B', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'BCHE', 'FCRL6', 'CKMT2', 'ABCA17P', 'LPAR3', 'DQX1', 'FAM189A1', 'PITX2', 'NLRP12', 'ADCYAP1', 'ENPP6', 'C2ORF50', 'CACNA1G', 'C1ORF101', 'SLC6A20', 'FAM95B1', 'FAM90A1', 'ZNF835', 'OTOA', 'SPIB', 'CLDN9', 'CA3', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'CLECL1', 'ULBP3', 'PCSK1N', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'SCN2B', 'LINC01550', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'PCYT1B', 'GSTM1', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'JPH3', 'CAMP', 'CPEB1', 'LOC90768', 'LOC441455', 'OR7E91P', 'FLJ37201', 'RELN', 'SCARA5', 'IL12RB2', 'LBX2', 'FUT7', 'RIMS1', 'PLA2G5', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'HOXB13', 'MNX1', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'BTBD8', 'WDR72', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'HOXB8', 'LINC01124', 'RSPH4A', 'MGC16142', 'ALB', 'CCDC183', 'SCART1', 'GBP1P1', 'CELF5', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'SKIDA1', 'CCDC153', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'NIPAL1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'PPP4R4', 'NOXO1', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'ULBP2', 'CXCR2P1', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'DBIL5P', 'ORM1', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'SUCNR1', 'DEPDC4', 'BRINP1', 'CTCFL', 'BDKRB1', 'VWDE', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'RDM1', 'CECR2', 'HCG27', 'KIAA0319', 'CYP4F8', 'CDR1', 'NUGGC', 'CLEC12A', 'ECEL1', 'PKD1L1', 'CBLN2', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'SPESP1', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'GPR87', 'TRAT1', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'WIPF3', 'SLC13A2', 'ZSCAN1', 'CA9', 'EMX1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'CITED1', 'TMEM40', 'MAPT.IT1', 'GZMM', 'ANKK1', 'WFDC3', 'ROPN1L', 'FIRRE', 'M1AP', 'CDHR1', 'MYO3B', 'PVALB', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'TTC23L', 'RBM12B.AS1', 'IGSF22', 'RFX8', 'MROH7', 'KCNT2', 'HEATR4', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'CIDEC', 'MIA', 'CCBE1', 'SRSF12', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KCNA6', 'KLK6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'SMC1B', 'DHDH', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'TUSC5', 'ADGRG2', 'TMPRSS4', 'C9ORF47', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'VENTX', 'FAM157A', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'DLX5', 'FAM19A2', 'CCNI2', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'CD160', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'OR2W3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'MYO16', 'CDKL2', 'CACNA1I', 'PWAR5', 'DLK2', 'DCX', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'SLC39A2', 'XCL2', 'LY6H', 'AGBL4', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'HRCT1', 'P2RY12', 'PCBP3', 'TM6SF2', 'LINC00202.1', 'ZNF727', 'ARL9', 'KCNH3', 'MAK', 'MPL', 'SNORD116.4', 'GRID2IP', 'SYCE3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'CD70', 'ELOVL3', 'GPM6A', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'GRIN2A', 'PGLYRP2', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'LRRC43', 'AGAP7P', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'SCN2A', 'KLK10', 'SCN9A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'TTYH1', 'GABRB3', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'IL17D', 'SLC35F3', 'GPR63', 'CAPSL', 'GBP6', 'ANKLE1', 'MUC15', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'HAMP', 'FAM201A', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'MTUS2', 'LOC100132215', 'RUNDC3A', 'RRN3P1', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'CYP2E1', 'FOLR1', 'LINC00961', 'PNMA6A', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'KIF19', 'CCR10', 'DPEP1', 'IL1RL1', 'GLI1', 'ARRDC3.AS1', 'IL24', 'KISS1R', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'KIAA1210', 'NIPAL4', 'PRRT4', 'RHBG', 'A2ML1', 'WBP2NL', 'GPR135', 'CBLN1', 'LOC90246', 'GNMT', 'DPF3', 'PCDHB18P', 'IL18RAP', 'MAP7D2', 'CD300LB', 'B3GALT5', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'MASP2', 'GABRB2', 'PCDH20', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'ANK1', 'GPR171', 'CRB2', 'KCNB1', 'CD19', 'SLC26A3', 'SEPHS1P1', 'LINC01465', 'HIST1H2AG', 'UCA1', 'RASAL1', 'TYMSOS', 'LINC00685', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'RIC3', 'CST2', 'MED12L', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'NRXN1', 'SEC14L1P1', 'FAM182B', 'EYA1', 'IL6', 'MYEOV', 'ARHGEF33', 'MAPT.AS1', 'RAB3B', 'STXBP6', 'KCNRG', 'CR2', 'CXCR2', 'MSLN', 'PATL2', 'KIF4B', 'LPAR4', 'CLEC4F', 'AJAP1', 'ZNF676', 'TDRD9', 'VSTM2A', 'CLDN14', 'FNDC8', 'MKX', 'ABHD1', 'TRABD2A', 'MAGEL2', 'NDP', 'PDCD1', 'FAM43B', 'VIT', 'POU3F1', 'TSPAN32', 'SEZ6L', 'CTNNB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693844 Coefficient of Determination: 1.0 RMSE: 4.199646440009065e-15 NRMSE: 8.260516207728296e-16 MAPE: 5.239413856435798e-12 Pearson Correlation: 0.3374555877831448 Spearman Correlation: 0.3600618461576828 Coefficient of Determination: -0.7479540810891934 RMSE: 0.8959327401651456 NRMSE: 0.2869381275769989 MAPE: 404.69366902818365 Predictor: ElasticNet Pearson Correlation: 0.8925117360288939 Spearman Correlation: 0.879137338044987 Coefficient of Determination: 0.7375956273670301 RMSE: 0.387254342312192 NRMSE: 0.07617119242962078 MAPE: 296.2010552658137 Pearson Correlation: 0.4270130717326275 Spearman Correlation: 0.43938951857255076 Coefficient of Determination: 0.12033654596202448 RMSE: 0.635577731092067 NRMSE: 0.2035548829877328 MAPE: 261.3011143293349 Predictor: RandomForests Pearson Correlation: 0.5034588933005412 Spearman Correlation: 0.5202799056577884 Coefficient of Determination: 0.210471938650169 RMSE: 0.6717296950531523 NRMSE: 0.13212621853917236 MAPE: 668.6961684055334 Pearson Correlation: 0.438065048106961 Spearman Correlation: 0.4349705108542501 Coefficient of Determination: 0.17517485171569425 RMSE: 0.6154479713477263 NRMSE: 0.1971079754123368 MAPE: 237.71036852722932 Protein: CCNE1 x_train_column_count: 1002 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'PPP1R3G', 'SLC28A3', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'METTL7B', 'HEPACAM2', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'LRIT3', 'ALOXE3', 'GLIS1', 'SGK2', 'ZNF843', 'S100A3', 'LINC00482', 'NR1I3', 'CCDC36', 'WNT2B', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'BCHE', 'FCRL6', 'CKMT2', 'ABCA17P', 'LPAR3', 'DQX1', 'FAM189A1', 'PITX2', 'NLRP12', 'ADCYAP1', 'ENPP6', 'C2ORF50', 'CACNA1G', 'C1ORF101', 'SLC6A20', 'FAM95B1', 'FAM90A1', 'ZNF835', 'OTOA', 'SPIB', 'CLDN9', 'CA3', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'CLECL1', 'ULBP3', 'PCSK1N', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'SCN2B', 'LINC01550', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'PCYT1B', 'GSTM1', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'JPH3', 'CAMP', 'CPEB1', 'LOC90768', 'LOC441455', 'OR7E91P', 'FLJ37201', 'RELN', 'SCARA5', 'IL12RB2', 'LBX2', 'FUT7', 'RIMS1', 'PLA2G5', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'HOXB13', 'MNX1', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'BTBD8', 'WDR72', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'HOXB8', 'LINC01124', 'RSPH4A', 'MGC16142', 'ALB', 'CCDC183', 'SCART1', 'GBP1P1', 'CELF5', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'SKIDA1', 'CCDC153', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'NIPAL1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'PPP4R4', 'NOXO1', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'ULBP2', 'CXCR2P1', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'DBIL5P', 'ORM1', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'SUCNR1', 'DEPDC4', 'BRINP1', 'CTCFL', 'BDKRB1', 'VWDE', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'RDM1', 'CECR2', 'HCG27', 'KIAA0319', 'CYP4F8', 'CDR1', 'NUGGC', 'CLEC12A', 'ECEL1', 'PKD1L1', 'CBLN2', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'SPESP1', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'GPR87', 'TRAT1', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'WIPF3', 'SLC13A2', 'ZSCAN1', 'CA9', 'EMX1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'CITED1', 'TMEM40', 'MAPT.IT1', 'GZMM', 'ANKK1', 'WFDC3', 'ROPN1L', 'FIRRE', 'M1AP', 'CDHR1', 'MYO3B', 'PVALB', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'TTC23L', 'RBM12B.AS1', 'IGSF22', 'RFX8', 'MROH7', 'KCNT2', 'HEATR4', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'CIDEC', 'MIA', 'CCBE1', 'SRSF12', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KCNA6', 'KLK6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'SMC1B', 'DHDH', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'TUSC5', 'ADGRG2', 'TMPRSS4', 'C9ORF47', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'VENTX', 'FAM157A', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'DLX5', 'FAM19A2', 'CCNI2', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'CD160', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'OR2W3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'MYO16', 'CDKL2', 'CACNA1I', 'PWAR5', 'DLK2', 'DCX', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'SLC39A2', 'XCL2', 'LY6H', 'AGBL4', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'HRCT1', 'P2RY12', 'PCBP3', 'TM6SF2', 'LINC00202.1', 'ZNF727', 'ARL9', 'KCNH3', 'MAK', 'MPL', 'SNORD116.4', 'GRID2IP', 'SYCE3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'CD70', 'ELOVL3', 'GPM6A', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'GRIN2A', 'PGLYRP2', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'LRRC43', 'AGAP7P', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'SCN2A', 'KLK10', 'SCN9A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'TTYH1', 'GABRB3', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'IL17D', 'SLC35F3', 'GPR63', 'CAPSL', 'GBP6', 'ANKLE1', 'MUC15', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'HAMP', 'FAM201A', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'MTUS2', 'LOC100132215', 'RUNDC3A', 'RRN3P1', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'CYP2E1', 'FOLR1', 'LINC00961', 'PNMA6A', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'KIF19', 'CCR10', 'DPEP1', 'IL1RL1', 'GLI1', 'ARRDC3.AS1', 'IL24', 'KISS1R', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'KIAA1210', 'NIPAL4', 'PRRT4', 'RHBG', 'A2ML1', 'WBP2NL', 'GPR135', 'CBLN1', 'LOC90246', 'GNMT', 'DPF3', 'PCDHB18P', 'IL18RAP', 'MAP7D2', 'CD300LB', 'B3GALT5', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'MASP2', 'GABRB2', 'PCDH20', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'ANK1', 'GPR171', 'CRB2', 'KCNB1', 'CD19', 'SLC26A3', 'SEPHS1P1', 'LINC01465', 'HIST1H2AG', 'UCA1', 'RASAL1', 'TYMSOS', 'LINC00685', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'RIC3', 'CST2', 'MED12L', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'NRXN1', 'SEC14L1P1', 'FAM182B', 'EYA1', 'IL6', 'MYEOV', 'ARHGEF33', 'MAPT.AS1', 'RAB3B', 'STXBP6', 'KCNRG', 'CR2', 'CXCR2', 'MSLN', 'PATL2', 'KIF4B', 'LPAR4', 'CLEC4F', 'AJAP1', 'ZNF676', 'TDRD9', 'VSTM2A', 'CLDN14', 'FNDC8', 'MKX', 'ABHD1', 'TRABD2A', 'MAGEL2', 'NDP', 'PDCD1', 'FAM43B', 'VIT', 'POU3F1', 'TSPAN32', 'SEZ6L', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 2.4882657709597456e-15 NRMSE: 8.86292349406855e-16 MAPE: 4.967663240421457e-13 Pearson Correlation: 0.46449621830726673 Spearman Correlation: 0.4711654758787517 Coefficient of Determination: 0.14038455651317283 RMSE: 0.600885209448974 NRMSE: 0.1450117550616536 MAPE: 86.13610684688507 Predictor: ElasticNet Pearson Correlation: 0.8673586617540446 Spearman Correlation: 0.7849975502235014 Coefficient of Determination: 0.7288612729963604 RMSE: 0.23369097391618793 NRMSE: 0.08323810290870451 MAPE: 47.47108148611233 Pearson Correlation: 0.5648939291312595 Spearman Correlation: 0.6154665270140526 Coefficient of Determination: 0.30791815759941876 RMSE: 0.5391605865585171 NRMSE: 0.13011573872590126 MAPE: 82.02597463763016 Predictor: RandomForests Pearson Correlation: 0.712815413165744 Spearman Correlation: 0.624796979738585 Coefficient of Determination: 0.46371982924917665 RMSE: 0.3286563529646515 NRMSE: 0.11706370541928815 MAPE: 69.0318712126319 Pearson Correlation: 0.4839687746926373 Spearman Correlation: 0.5712914126111298 Coefficient of Determination: 0.21241857204587122 RMSE: 0.575157970719762 NRMSE: 0.13880299508163285 MAPE: 95.79023798537169 Protein: CCND1 x_train_column_count: 1002 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'PPP1R3G', 'SLC28A3', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'METTL7B', 'HEPACAM2', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'LRIT3', 'ALOXE3', 'GLIS1', 'SGK2', 'ZNF843', 'S100A3', 'LINC00482', 'NR1I3', 'CCDC36', 'WNT2B', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'BCHE', 'FCRL6', 'CKMT2', 'ABCA17P', 'LPAR3', 'DQX1', 'FAM189A1', 'PITX2', 'NLRP12', 'ADCYAP1', 'ENPP6', 'C2ORF50', 'CACNA1G', 'C1ORF101', 'SLC6A20', 'FAM95B1', 'FAM90A1', 'ZNF835', 'OTOA', 'SPIB', 'CLDN9', 'CA3', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'CLECL1', 'ULBP3', 'PCSK1N', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'SCN2B', 'LINC01550', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'PCYT1B', 'GSTM1', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'JPH3', 'CAMP', 'CPEB1', 'LOC90768', 'LOC441455', 'OR7E91P', 'FLJ37201', 'RELN', 'SCARA5', 'IL12RB2', 'LBX2', 'FUT7', 'RIMS1', 'PLA2G5', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'HOXB13', 'MNX1', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'BTBD8', 'WDR72', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'HOXB8', 'LINC01124', 'RSPH4A', 'MGC16142', 'ALB', 'CCDC183', 'SCART1', 'GBP1P1', 'CELF5', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'SKIDA1', 'CCDC153', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'NIPAL1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'PPP4R4', 'NOXO1', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'ULBP2', 'CXCR2P1', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'DBIL5P', 'ORM1', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'SUCNR1', 'DEPDC4', 'BRINP1', 'CTCFL', 'BDKRB1', 'VWDE', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'RDM1', 'CECR2', 'HCG27', 'KIAA0319', 'CYP4F8', 'CDR1', 'NUGGC', 'CLEC12A', 'ECEL1', 'PKD1L1', 'CBLN2', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'SPESP1', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'GPR87', 'TRAT1', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'WIPF3', 'SLC13A2', 'ZSCAN1', 'CA9', 'EMX1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'CITED1', 'TMEM40', 'MAPT.IT1', 'GZMM', 'ANKK1', 'WFDC3', 'ROPN1L', 'FIRRE', 'M1AP', 'CDHR1', 'MYO3B', 'PVALB', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'TTC23L', 'RBM12B.AS1', 'IGSF22', 'RFX8', 'MROH7', 'KCNT2', 'HEATR4', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'CIDEC', 'MIA', 'CCBE1', 'SRSF12', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KCNA6', 'KLK6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'SMC1B', 'DHDH', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'TUSC5', 'ADGRG2', 'TMPRSS4', 'C9ORF47', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'VENTX', 'FAM157A', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'DLX5', 'FAM19A2', 'CCNI2', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'CD160', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'OR2W3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'MYO16', 'CDKL2', 'CACNA1I', 'PWAR5', 'DLK2', 'DCX', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'SLC39A2', 'XCL2', 'LY6H', 'AGBL4', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'HRCT1', 'P2RY12', 'PCBP3', 'TM6SF2', 'LINC00202.1', 'ZNF727', 'ARL9', 'KCNH3', 'MAK', 'MPL', 'SNORD116.4', 'GRID2IP', 'SYCE3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'CD70', 'ELOVL3', 'GPM6A', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'GRIN2A', 'PGLYRP2', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'LRRC43', 'AGAP7P', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'SCN2A', 'KLK10', 'SCN9A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'TTYH1', 'GABRB3', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'IL17D', 'SLC35F3', 'GPR63', 'CAPSL', 'GBP6', 'ANKLE1', 'MUC15', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'HAMP', 'FAM201A', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'MTUS2', 'LOC100132215', 'RUNDC3A', 'RRN3P1', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'CYP2E1', 'FOLR1', 'LINC00961', 'PNMA6A', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'KIF19', 'CCR10', 'DPEP1', 'IL1RL1', 'GLI1', 'ARRDC3.AS1', 'IL24', 'KISS1R', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'KIAA1210', 'NIPAL4', 'PRRT4', 'RHBG', 'A2ML1', 'WBP2NL', 'GPR135', 'CBLN1', 'LOC90246', 'GNMT', 'DPF3', 'PCDHB18P', 'IL18RAP', 'MAP7D2', 'CD300LB', 'B3GALT5', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'MASP2', 'GABRB2', 'PCDH20', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'ANK1', 'GPR171', 'CRB2', 'KCNB1', 'CD19', 'SLC26A3', 'SEPHS1P1', 'LINC01465', 'HIST1H2AG', 'UCA1', 'RASAL1', 'TYMSOS', 'LINC00685', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'RIC3', 'CST2', 'MED12L', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'NRXN1', 'SEC14L1P1', 'FAM182B', 'EYA1', 'IL6', 'MYEOV', 'ARHGEF33', 'MAPT.AS1', 'RAB3B', 'STXBP6', 'KCNRG', 'CR2', 'CXCR2', 'MSLN', 'PATL2', 'KIF4B', 'LPAR4', 'CLEC4F', 'AJAP1', 'ZNF676', 'TDRD9', 'VSTM2A', 'CLDN14', 'FNDC8', 'MKX', 'ABHD1', 'TRABD2A', 'MAGEL2', 'NDP', 'PDCD1', 'FAM43B', 'VIT', 'POU3F1', 'TSPAN32', 'SEZ6L', 'CCND1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.1102790179359783e-15 NRMSE: 6.993090660183276e-16 MAPE: 3.3878108342781036e-12 Pearson Correlation: 0.07769777108309271 Spearman Correlation: -0.017813189690644524 Coefficient of Determination: -0.6901715357905311 RMSE: 0.35876483358577715 NRMSE: 0.22921048388455115 MAPE: 331.05272622422166 Predictor: ElasticNet Pearson Correlation: 0.6055627542029853 Spearman Correlation: 0.6041544323941662 Coefficient of Determination: 0.28563039036737925 RMSE: 0.192384267947992 NRMSE: 0.12117320111608888 MAPE: 643.2002257616286 Pearson Correlation: 0.17855326028027357 Spearman Correlation: 0.14133592688188132 Coefficient of Determination: 0.026285009686696448 RMSE: 0.27230800149874734 NRMSE: 0.17397426655597764 MAPE: 254.13577765982916 Predictor: RandomForests Pearson Correlation: 0.5286476974348564 Spearman Correlation: 0.5499973433142007 Coefficient of Determination: 0.1629324477016767 RMSE: 0.20825158882512715 NRMSE: 0.13116723069203312 MAPE: 651.7667238983636 Pearson Correlation: 0.20335988851940703 Spearman Correlation: 0.15461788800359108 Coefficient of Determination: 0.036184945856830186 RMSE: 0.27092016256763735 NRMSE: 0.17308759316111302 MAPE: 261.1281856249571 Protein: ERBB2 x_train_column_count: 1002 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'PPP1R3G', 'SLC28A3', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'METTL7B', 'HEPACAM2', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'LRIT3', 'ALOXE3', 'GLIS1', 'SGK2', 'ZNF843', 'S100A3', 'LINC00482', 'NR1I3', 'CCDC36', 'WNT2B', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'BCHE', 'FCRL6', 'CKMT2', 'ABCA17P', 'LPAR3', 'DQX1', 'FAM189A1', 'PITX2', 'NLRP12', 'ADCYAP1', 'ENPP6', 'C2ORF50', 'CACNA1G', 'C1ORF101', 'SLC6A20', 'FAM95B1', 'FAM90A1', 'ZNF835', 'OTOA', 'SPIB', 'CLDN9', 'CA3', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'CLECL1', 'ULBP3', 'PCSK1N', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'SCN2B', 'LINC01550', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'PCYT1B', 'GSTM1', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'JPH3', 'CAMP', 'CPEB1', 'LOC90768', 'LOC441455', 'OR7E91P', 'FLJ37201', 'RELN', 'SCARA5', 'IL12RB2', 'LBX2', 'FUT7', 'RIMS1', 'PLA2G5', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'HOXB13', 'MNX1', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'BTBD8', 'WDR72', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'HOXB8', 'LINC01124', 'RSPH4A', 'MGC16142', 'ALB', 'CCDC183', 'SCART1', 'GBP1P1', 'CELF5', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'SKIDA1', 'CCDC153', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'NIPAL1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'PPP4R4', 'NOXO1', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'ULBP2', 'CXCR2P1', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'DBIL5P', 'ORM1', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'SUCNR1', 'DEPDC4', 'BRINP1', 'CTCFL', 'BDKRB1', 'VWDE', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'RDM1', 'CECR2', 'HCG27', 'KIAA0319', 'CYP4F8', 'CDR1', 'NUGGC', 'CLEC12A', 'ECEL1', 'PKD1L1', 'CBLN2', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'SPESP1', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'GPR87', 'TRAT1', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'WIPF3', 'SLC13A2', 'ZSCAN1', 'CA9', 'EMX1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'CITED1', 'TMEM40', 'MAPT.IT1', 'GZMM', 'ANKK1', 'WFDC3', 'ROPN1L', 'FIRRE', 'M1AP', 'CDHR1', 'MYO3B', 'PVALB', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'TTC23L', 'RBM12B.AS1', 'IGSF22', 'RFX8', 'MROH7', 'KCNT2', 'HEATR4', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'CIDEC', 'MIA', 'CCBE1', 'SRSF12', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KCNA6', 'KLK6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'SMC1B', 'DHDH', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'TUSC5', 'ADGRG2', 'TMPRSS4', 'C9ORF47', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'VENTX', 'FAM157A', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'DLX5', 'FAM19A2', 'CCNI2', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'CD160', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'OR2W3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'MYO16', 'CDKL2', 'CACNA1I', 'PWAR5', 'DLK2', 'DCX', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'SLC39A2', 'XCL2', 'LY6H', 'AGBL4', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'HRCT1', 'P2RY12', 'PCBP3', 'TM6SF2', 'LINC00202.1', 'ZNF727', 'ARL9', 'KCNH3', 'MAK', 'MPL', 'SNORD116.4', 'GRID2IP', 'SYCE3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'CD70', 'ELOVL3', 'GPM6A', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'GRIN2A', 'PGLYRP2', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'LRRC43', 'AGAP7P', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'SCN2A', 'KLK10', 'SCN9A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'TTYH1', 'GABRB3', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'IL17D', 'SLC35F3', 'GPR63', 'CAPSL', 'GBP6', 'ANKLE1', 'MUC15', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'HAMP', 'FAM201A', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'MTUS2', 'LOC100132215', 'RUNDC3A', 'RRN3P1', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'CYP2E1', 'FOLR1', 'LINC00961', 'PNMA6A', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'KIF19', 'CCR10', 'DPEP1', 'IL1RL1', 'GLI1', 'ARRDC3.AS1', 'IL24', 'KISS1R', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'KIAA1210', 'NIPAL4', 'PRRT4', 'RHBG', 'A2ML1', 'WBP2NL', 'GPR135', 'CBLN1', 'LOC90246', 'GNMT', 'DPF3', 'PCDHB18P', 'IL18RAP', 'MAP7D2', 'CD300LB', 'B3GALT5', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'MASP2', 'GABRB2', 'PCDH20', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'ANK1', 'GPR171', 'CRB2', 'KCNB1', 'CD19', 'SLC26A3', 'SEPHS1P1', 'LINC01465', 'HIST1H2AG', 'UCA1', 'RASAL1', 'TYMSOS', 'LINC00685', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'RIC3', 'CST2', 'MED12L', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'NRXN1', 'SEC14L1P1', 'FAM182B', 'EYA1', 'IL6', 'MYEOV', 'ARHGEF33', 'MAPT.AS1', 'RAB3B', 'STXBP6', 'KCNRG', 'CR2', 'CXCR2', 'MSLN', 'PATL2', 'KIF4B', 'LPAR4', 'CLEC4F', 'AJAP1', 'ZNF676', 'TDRD9', 'VSTM2A', 'CLDN14', 'FNDC8', 'MKX', 'ABHD1', 'TRABD2A', 'MAGEL2', 'NDP', 'PDCD1', 'FAM43B', 'VIT', 'POU3F1', 'TSPAN32', 'SEZ6L', 'ERBB2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999807346924 Coefficient of Determination: 1.0 RMSE: 5.2949796094685554e-15 NRMSE: 9.020869225801242e-16 MAPE: 5.758298473806538e-12 Pearson Correlation: 0.40174518458421454 Spearman Correlation: 0.3286200576067034 Coefficient of Determination: -0.3483642404922147 RMSE: 1.0075888680089637 NRMSE: 0.2229425529392552 MAPE: 650.4787958801335 Predictor: ElasticNet Pearson Correlation: 0.9383857724836328 Spearman Correlation: 0.862036201208105 Coefficient of Determination: 0.8537662508579564 RMSE: 0.3930820971934754 NRMSE: 0.06696800470100268 MAPE: 634.4909419887331 Pearson Correlation: 0.551553088010312 Spearman Correlation: 0.4097831643786082 Coefficient of Determination: 0.2792169984097681 RMSE: 0.7366853198034188 NRMSE: 0.1630015089729879 MAPE: 432.4435361065487 Predictor: RandomForests Pearson Correlation: 0.6541667238286877 Spearman Correlation: 0.5654124617564386 Coefficient of Determination: 0.30692391325180846 RMSE: 0.8557559244622899 NRMSE: 0.14579210597854914 MAPE: 572.9521232355245 Pearson Correlation: 0.5261452076785942 Spearman Correlation: 0.49522562625469146 Coefficient of Determination: 0.21807801776449676 RMSE: 0.7672933935634009 NRMSE: 0.1697739558719772 MAPE: 778.0904597035392 Protein: ERBB3 x_train_column_count: 1002 x_train columns: ['AMDHD1', 'SOX15', 'DES', 'POU5F1B', 'ALDH1L1', 'PCSK1', 'ALOX15', 'MPZ', 'C4ORF36', 'TAT', 'LEP', 'TMEM200C', 'NPTX1', 'MST1L', 'CA14', 'PPP2R2B', 'ACTA1', 'PCDHGA1', 'ABCA10', 'MUC6', 'CATSPER3', 'TUBA3E', 'GLDC', 'FIBCD1', 'GRIK4', 'C10ORF55', 'CYP4F35P', 'LOC100272216', 'C1ORF228', 'FDCSP', 'ANP32AP1', 'PDZD7', 'CLPSL2', 'ZSCAN23', 'PTPRH', 'SLITRK5', 'SLC1A7', 'MOGAT2', 'SLC26A4', 'MAST1', 'XKRX', 'FBLL1', 'LINC00922', 'CACNA1F', 'LRFN2', 'PDE6G', 'CCL13', 'LOC399815', 'IRX6', 'BMX', 'FOXP2', 'CFAP57', 'KIAA0125', 'PCDHA2', 'GIPR', 'ASB14', 'ALG1L', 'C1ORF186', 'FOXF1', 'JAKMIP2', 'KCNJ10', 'NXNL2', 'LINC01139', 'TSSK4', 'CADM2', 'ZNF280B', 'HHIPL2', 'C2CD4B', 'CERS1', 'PDZRN4', 'DNAJC5B', 'HSD17B2', 'BRINP2', 'ASAH2B', 'LGR5', 'LRFN5', 'TMEM35', 'WNK3', 'DNAI1', 'C10ORF95', 'RNASE2', 'MAT1A', 'LGALS12', 'PCDHAC1', 'GPR141', 'GDF6', 'TMEM151B', 'FCGR3B', 'GSDMA', 'PTCHD2', 'LINGO4', 'TMEM132C', 'CYP11A1', 'HIST1H2AM', 'TMEM253', 'HP', 'KRT6A', 'MIR503HG', 'IL1RL2', 'C19ORF26', 'ESYT3', 'PCP4L1', 'MYT1', 'TLL2', 'AOC1', 'NFE2', 'DMC1', 'KIAA1875', 'CD164L2', 'KIF1A', 'HMGCLL1', 'AQP5', 'ERICH3', 'SLC6A16', 'C1QL1', 'SLC24A2', 'DGKI', 'DYDC2', 'UMODL1', 'PRAME', 'PQLC2L', 'HAND2.AS1', 'IQSEC3', 'ATP8A2', 'IGDCC3', 'LOC644172', 'EPHA7', 'TGM1', 'SPSB4', 'PKD1L2', 'TEKT2', 'CD300LG', 'AQP7', 'C2CD4C', 'GP1BA', 'NPC1L1', 'UGT2B15', 'TMEM232', 'NBPF6', 'GPR27', 'MGAM', 'PLA2G10', 'CNTF', 'PRSS12', 'CD244', 'DIO3', 'MCHR1', 'KERA', 'PLEKHD1', 'PTCHD4', 'FCRL3', 'PNMT', 'SLC6A4', 'SLC25A21', 'LOC100130987', 'LINC00242', 'RGN', 'FCRLA', 'DCANP1', 'IL10', 'PLCXD3', 'CST4', 'LINC00839', 'STAP1', 'SPDYA', 'SNAP25', 'TBC1D3H', 'L1TD1', 'C6', 'DLGAP1', 'TPSD1', 'PCDHGB3', 'DNASE1L3', 'GFRA2', 'FLG', 'C1GALT1C1L', 'SFTPD', 'IGFL2', 'GPR158', 'GJB3', 'ITPKA', 'FAM186B', 'PROC', 'GDF10', 'ZBED2', 'NR6A1', 'TM4SF19', 'BCO2', 'PTH2R', 'GUSBP5', 'DOC2B', 'SULT4A1', 'C1ORF229', 'SLC17A7', 'FBXL13', 'FAM86B2', 'PPM1N', 'BCAN', 'KCNG1', 'PNPLA3', 'ALOX12P2', 'HIST2H2BA', 'PTPRZ1', 'ZNF492', 'SIGLEC15', 'PRR34', 'NNAT', 'HTR1D', 'FGF18', 'C10ORF82', 'LRRC31', 'ATP1A4', 'HCN2', 'EGOT', 'LRRIQ3', 'LCN12', 'KCNJ3', 'RNF183', 'SLC7A4', 'GJB5', 'ZNF660', 'NAALAD2', 'AURKAPS1', 'LTA', 'RAET1E', 'LRRIQ1', 'SLC38A4', 'TNFSF15', 'PCDHA7', 'ADRA1B', 'SYT8', 'SCGB3A1', 'CNGA1', 'C4ORF47', 'LY6G6C', 'FBXO24', 'TRPA1', 'MAL', 'RPL13AP3', 'ACSL6', 'RP1', 'GRM8', 'KLK11', 'TUBA3D', 'PTGDR', 'IQUB', 'LINC01119', 'NKPD1', 'ECT2L', 'EYS', 'CBLN4', 'PAX2', 'LINC01341', 'SOX8', 'C19ORF18', 'SLC30A8', 'MYCBPAP', 'CCIN', 'RNF138P1', 'CCR8', 'TEKT3', 'ETV2', 'FXYD1', 'PPP1R3G', 'SLC28A3', 'UGT8', 'STKLD1', 'XPNPEP2', 'UBE2Q2P1', 'JPH4', 'METTL7B', 'HEPACAM2', 'PLP1', 'TEX14', 'SLC25A18', 'CASQ1', 'IDI2.AS1', 'PBX4', 'LRIT3', 'ALOXE3', 'GLIS1', 'SGK2', 'ZNF843', 'S100A3', 'LINC00482', 'NR1I3', 'CCDC36', 'WNT2B', 'MS4A15', 'CACNG1', 'ST6GALNAC1', 'GTSE1.AS1', 'ZIC2', 'ADAMTS8', 'LGALS2', 'TMEM92', 'PYGO1', 'FUT9', 'PNCK', 'C9ORF43', 'GJB1', 'AOC2', 'CCDC151', 'TNNI3K', 'BCHE', 'FCRL6', 'CKMT2', 'ABCA17P', 'LPAR3', 'DQX1', 'FAM189A1', 'PITX2', 'NLRP12', 'ADCYAP1', 'ENPP6', 'C2ORF50', 'CACNA1G', 'C1ORF101', 'SLC6A20', 'FAM95B1', 'FAM90A1', 'ZNF835', 'OTOA', 'SPIB', 'CLDN9', 'CA3', 'IYD', 'PCDH9', 'C1ORF95', 'RYR2', 'C2CD4A', 'CLEC3A', 'CCDC158', 'VSIG1', 'CLECL1', 'ULBP3', 'PCSK1N', 'ZCCHC18', 'ARC', 'CCDC65', 'IL20RB', 'DDX11L2', 'GSDMC', 'TAS1R3', 'SVOPL', 'AURKC', 'TTC16', 'SCN2B', 'LINC01550', 'ALDH8A1', 'BPIFB2', 'MYOZ1', 'COLCA2', 'PCYT1B', 'GSTM1', 'DUOXA1', 'KNDC1', 'B3GALT5.AS1', 'PDE1C', 'CRYGS', 'KLHL4', 'TARP', 'HOXD3', 'IL22RA1', 'LUZP2', 'LOC148709', 'FAM57B', 'PPP1R36', 'JPH3', 'CAMP', 'CPEB1', 'LOC90768', 'LOC441455', 'OR7E91P', 'FLJ37201', 'RELN', 'SCARA5', 'IL12RB2', 'LBX2', 'FUT7', 'RIMS1', 'PLA2G5', 'CD177', 'IGSF5', 'KCNE1', 'HIST1H2BN', 'GPR18', 'ASTN1', 'SLC22A18AS', 'ZBED3.AS1', 'TUBB8', 'HOXB13', 'MNX1', 'ZC3H12D', 'TCHH', 'KCNE2', 'IRX4', 'C10ORF128', 'FAM135B', 'GAL', 'BTBD8', 'WDR72', 'CHRNA6', 'SP5', 'ONECUT2', 'CIDEA', 'SLC16A10', 'SCN7A', 'HOXB8', 'LINC01124', 'RSPH4A', 'MGC16142', 'ALB', 'CCDC183', 'SCART1', 'GBP1P1', 'CELF5', 'CCDC7', 'MGAT5B', 'DCSTAMP', 'YPEL4', 'GRIN2C', 'CXXC4', 'GPR3', 'SKIDA1', 'CCDC153', 'HOXA11', 'SLC30A2', 'ATP13A5', 'SLC35F1', 'NIPAL1', 'PYDC1', 'CXCR5', 'OBP2B', 'STRC', 'TNFRSF9', 'PCSK9', 'SRL', 'RPGRIP1', 'FOXJ1', 'PCAT18', 'WT1', 'LRP1B', 'PPP4R4', 'NOXO1', 'INSM1', 'CNNM1', 'GPR174', 'SLC18A2', 'MARCO', 'GPX2', 'DMRT3', 'C17ORF104', 'PCK1', 'SLC25A53', 'FOXD4', 'INHA', 'NOS2', 'KLHL14', 'FOXD1', 'AVPR2', 'ADH1C', 'COL23A1', 'CRISP3', 'IL20', 'LBP', 'TNFRSF17', 'BTLA', 'PKNOX2', 'GPLD1', 'CXCL2', 'MYBPC1', 'PARP15', 'GLOD5', 'C2ORF40', 'CST9', 'PFN1P2', 'SLCO4C1', 'BCL2L14', 'SLC23A1', 'STEAP1B', 'GPR55', 'AMH', 'VAT1L', 'VSIG2', 'ZNF98', 'SCN3A', 'ULBP2', 'CXCR2P1', 'DHRS4L1', 'HAP1', 'VGLL1', 'TPSG1', 'RNF212', 'CYSLTR2', 'ZNF454', 'ZNF488', 'FAM218A', 'FAM178B', 'SYN2', 'EMILIN3', 'TMEM105', 'DKK1', 'P2RX1', 'DBIL5P', 'ORM1', 'DPY19L2P2', 'IL23A', 'CRYM', 'SIGLEC17P', 'CXCL1', 'AMBP', 'PRKG2', 'LRRC2', 'FABP7', 'GPBAR1', 'SPDYE1', 'SUCNR1', 'DEPDC4', 'BRINP1', 'CTCFL', 'BDKRB1', 'VWDE', 'LRGUK', 'XIRP1', 'TENM1', 'FUT6', 'RERGL', 'BMPER', 'ADAMTS18', 'LINC00930', 'RDM1', 'CECR2', 'HCG27', 'KIAA0319', 'CYP4F8', 'CDR1', 'NUGGC', 'CLEC12A', 'ECEL1', 'PKD1L1', 'CBLN2', 'ABHD11.AS1', 'SEC14L5', 'WSCD2', 'SORCS1', 'FAM184B', 'PCDHGA3', 'SPESP1', 'SSUH2', 'FSCN2', 'FAM162B', 'DMRT2', 'ZNF732', 'CCL17', 'CTSG', 'RSPO1', 'TMEM217', 'GRIA3', 'GNB3', 'PIANP', 'HOXD4', 'RGS6', 'FLJ12825', 'COL2A1', 'CHRNB2', 'ADAM32', 'IL1R2', 'RNF175', 'SERPINA6', 'MT1A', 'ADAMTS19', 'PFKFB1', 'DIRC3', 'RASL10A', 'HECTD2.AS1', 'POM121L9P', 'SMIM5', 'CYP46A1', 'LRRC16B', 'PRSS21', 'ZNF804A', 'IGF2BP3', 'CAPN11', 'VIPR2', 'TBX21', 'CYSRT1', 'HIST1H2BE', 'GPR87', 'TRAT1', 'LOC100126784', 'PART1', 'FOXC2', 'HOGA1', 'WIPF3', 'SLC13A2', 'ZSCAN1', 'CA9', 'EMX1', 'HTR7', 'XKR9', 'SLC26A10', 'CEP83.AS1', 'ULBP1', 'HS3ST3B1', 'ZBTB16', 'CYP26A1', 'OTUD7A', 'TMSB15A', 'CITED1', 'TMEM40', 'MAPT.IT1', 'GZMM', 'ANKK1', 'WFDC3', 'ROPN1L', 'FIRRE', 'M1AP', 'CDHR1', 'MYO3B', 'PVALB', 'MRAP2', 'CRTAC1', 'INE2', 'SPAG17', 'TTC23L', 'RBM12B.AS1', 'IGSF22', 'RFX8', 'MROH7', 'KCNT2', 'HEATR4', 'PCDHA12', 'BTC', 'CFAP61', 'PYGM', 'NPAS1', 'SLC27A6', 'ADGRB1', 'NRTN', 'GPR37L1', 'UGT2B11', 'ADGRF1', 'LRRC4B', 'CLEC4E', 'HPDL', 'OPCML', 'TMEM59L', 'CIDEC', 'MIA', 'CCBE1', 'SRSF12', 'B3GAT1', 'LINC00173', 'NWD1', 'IL11', 'TSPAN8', 'RNF182', 'NLRP7', 'FRMPD1', 'KCNA6', 'KLK6', 'GALNT13', 'ABCC6P2', 'FASLG', 'LOC613037', 'LSAMP', 'GAS2', 'SMC1B', 'DHDH', 'FAM83A', 'RFPL1S', 'COL28A1', 'SCN3B', 'C15ORF56', 'SLC6A14', 'PSORS1C1', 'SLC16A11', 'PTCHD1', 'ANO5', 'TUSC5', 'ADGRG2', 'TMPRSS4', 'C9ORF47', 'SLC24A5', 'RUFY4', 'PIK3C2G', 'IGSF1', 'INTS4P2', 'KCNQ3', 'CYP4F12', 'LINC00908', 'LOC100133669', 'NBPF4', 'VENTX', 'FAM157A', 'MYOM2', 'EBF2', 'MAG', 'PTPRN', 'PCDHA5', 'DSCAML1', 'PLAC1', 'NKX3.2', 'DLX2', 'CNTN2', 'SYT6', 'SFTPA2', 'BRE.AS1', 'DLX5', 'FAM19A2', 'CCNI2', 'KLK7', 'ZBTB20', 'CDKN2B.AS1', 'CD160', 'GHRLOS', 'PTPRR', 'ABCC2', 'RYR3', 'OR2W3', 'SLC6A17', 'ABCD2', 'TFAP2E', 'CD1A', 'GRIA2', 'DEFB1', 'RGS9', 'CCDC144A', 'MYO16', 'CDKL2', 'CACNA1I', 'PWAR5', 'DLK2', 'DCX', 'GGT3P', 'SLC6A11', 'BTBD19', 'CHRFAM7A', 'WDR17', 'MMP12', 'MSMB', 'CABP4', 'TCEAL2', 'CHRNA10', 'UNC13A', 'FKBP1AP1', 'SLC39A2', 'XCL2', 'LY6H', 'AGBL4', 'S100A7', 'TUBAL3', 'SPAG8', 'TCN1', 'HRCT1', 'P2RY12', 'PCBP3', 'TM6SF2', 'LINC00202.1', 'ZNF727', 'ARL9', 'KCNH3', 'MAK', 'MPL', 'SNORD116.4', 'GRID2IP', 'SYCE3', 'NOX5', 'SLC46A2', 'TCTEX1D1', 'CD70', 'ELOVL3', 'GPM6A', 'TIGD4', 'JAKMIP1', 'SYCE2', 'ARMC3', 'GRIN2A', 'PGLYRP2', 'BAIAP2L2', 'CTAGE6', 'RAB9B', 'MKRN3', 'LONRF3', 'KLF3.AS1', 'ASIC3', 'SOSTDC1', 'ACY3', 'LRRC43', 'AGAP7P', 'THPO', 'BEX1', 'LOC400927', 'PRPH2', 'ACHE', 'AKR1E2', 'SCN2A', 'KLK10', 'SCN9A', 'RIMS2', 'CEACAM7', 'OLFM4', 'CTAGE11P', 'C6ORF52', 'TMEM145', 'VN1R1', 'CD40LG', 'HRC', 'BEGAIN', 'CHODL', 'PAH', 'LOC285593', 'CXADRP3', 'GPR82', 'TTBK1', 'SLC25A34', 'CHST9', 'TTYH1', 'GABRB3', 'ADGRL3', 'APOBEC3A', 'MLLT4.AS1', 'HIST1H2BH', 'BRSK2', 'TRH', 'MAPK4', 'EPYC', 'DNASE1L2', 'ST8SIA2', 'CAMK4', 'DGCR5', 'C8ORF46', 'IL17D', 'SLC35F3', 'GPR63', 'CAPSL', 'GBP6', 'ANKLE1', 'MUC15', 'ROBO2', 'AIM1L', 'ASGR1', 'MYO15A', 'HAMP', 'FAM201A', 'PCDHA1', 'TNFSF11', 'CHKB.AS1', 'RMRP', 'DUSP9', 'FAM159A', 'NMU', 'NEK5', 'RHCE', 'DCLK3', 'PTX3', 'TDRD6', 'LYG1', 'KCNK17', 'MTUS2', 'LOC100132215', 'RUNDC3A', 'RRN3P1', 'UCKL1.AS1', 'C1QL3', 'CYTL1', 'CYP2E1', 'FOLR1', 'LINC00961', 'PNMA6A', 'ROPN1B', 'HBA1', 'LINC00689', 'RRN3P2', 'THSD7B', 'MT1L', 'XCL1', 'SIGLEC6', 'ADRA2B', 'SLC2A14', 'ATP13A4', 'KIF19', 'CCR10', 'DPEP1', 'IL1RL1', 'GLI1', 'ARRDC3.AS1', 'IL24', 'KISS1R', 'ZMAT4', 'TMEM150B', 'LIN7A', 'GPR173', 'TTLL9', 'KIAA1210', 'NIPAL4', 'PRRT4', 'RHBG', 'A2ML1', 'WBP2NL', 'GPR135', 'CBLN1', 'LOC90246', 'GNMT', 'DPF3', 'PCDHB18P', 'IL18RAP', 'MAP7D2', 'CD300LB', 'B3GALT5', 'CNTNAP3', 'RRAD', 'OXGR1', 'FIGF', 'DPY19L2P4', 'RAB39A', 'HIST1H1D', 'CACNA2D3', 'MS4A8', 'SLC5A8', 'LRRC24', 'AIM2', 'TRIM7', 'PON3', 'MASP2', 'GABRB2', 'PCDH20', 'TIFAB', 'KLK8', 'PHKG1', 'DNAH11', 'FOXN1', 'WFIKKN1', 'DCST2', 'LINC00669', 'WNT10A', 'FREM2', 'C19ORF45', 'CLCA2', 'ANK1', 'GPR171', 'CRB2', 'KCNB1', 'CD19', 'SLC26A3', 'SEPHS1P1', 'LINC01465', 'HIST1H2AG', 'UCA1', 'RASAL1', 'TYMSOS', 'LINC00685', 'TTC41P', 'ANO2', 'CD1E', 'NEURL3', 'COLCA1', 'RIC3', 'CST2', 'MED12L', 'LOC646999', 'PCDHGC5', 'HNRNPCL3', 'CLPSL1', 'NRXN1', 'SEC14L1P1', 'FAM182B', 'EYA1', 'IL6', 'MYEOV', 'ARHGEF33', 'MAPT.AS1', 'RAB3B', 'STXBP6', 'KCNRG', 'CR2', 'CXCR2', 'MSLN', 'PATL2', 'KIF4B', 'LPAR4', 'CLEC4F', 'AJAP1', 'ZNF676', 'TDRD9', 'VSTM2A', 'CLDN14', 'FNDC8', 'MKX', 'ABHD1', 'TRABD2A', 'MAGEL2', 'NDP', 'PDCD1', 'FAM43B', 'VIT', 'POU3F1', 'TSPAN32', 'SEZ6L', 'ERBB3', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999997880816034 Coefficient of Determination: 1.0 RMSE: 3.919811869695551e-15 NRMSE: 1.0578447186714643e-15 MAPE: 3.2265929901370385e-12 Pearson Correlation: 0.20189817499065732 Spearman Correlation: 0.16759061833688702 Coefficient of Determination: -0.8855098577156428 RMSE: 0.5725568837105383 NRMSE: 0.2770204194376624 MAPE: 296.8608026753873 Predictor: ElasticNet Pearson Correlation: 0.8225350816272934 Spearman Correlation: 0.8183433192824542 Coefficient of Determination: 0.5972210149642523 RMSE: 0.2975932601889534 NRMSE: 0.08031187951567638 MAPE: 189.16780092345576 Pearson Correlation: 0.3381526948014405 Spearman Correlation: 0.35395703188319055 Coefficient of Determination: 0.028708528183323145 RMSE: 0.41094057528260236 NRMSE: 0.19882553815612353 MAPE: 238.06141076574298 Predictor: RandomForests Pearson Correlation: 0.523843344353483 Spearman Correlation: 0.5392659881899527 Coefficient of Determination: 0.20045720307842307 RMSE: 0.41928617921790834 NRMSE: 0.11315330557740538 MAPE: 232.00307462399965 Pearson Correlation: 0.4785720221506062 Spearman Correlation: 0.5048616566291351 Coefficient of Determination: 0.14516266759286256 RMSE: 0.3855191688570114 NRMSE: 0.18652588921107166 MAPE: 222.29528073978037
Unnormalized
scenario = Scenario.ThousandMostVariableGenes_Mutations
normalizeTechnique = NormalizeTechnique.UN
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 10.7401 | 141.1933 | 314.4482 | 0.0000 | 0.0 | 0.000 | 2.9988 | 9.4249 | 0.0 | 0.0000 | ... | 74.1138 | 533.3625 | 1053.4444 | 94.6772 | 881.2262 | 5343.4779 | 934.3482 | 508.0867 | 52.2652 | 0.8568 |
| TCGA-A1-A0SH-01 | 3.0048 | 79.8003 | 95.7054 | 0.0000 | 0.0 | 0.000 | 0.3612 | 3.9727 | 0.0 | 0.0000 | ... | 87.7601 | 581.0946 | 801.3977 | 19.8634 | 1353.2389 | 5464.9614 | 1312.7898 | 1001.1151 | 455.7746 | 0.0000 |
| TCGA-A1-A0SJ-01 | 4.9419 | 134.8733 | 63.6488 | 0.3658 | 0.0 | 0.000 | 0.3658 | 4.7554 | 0.0 | 0.7316 | ... | 83.7677 | 2731.4129 | 834.3850 | 51.2117 | 1092.6383 | 3032.0988 | 958.3905 | 718.7929 | 43.5299 | 0.0000 |
| TCGA-A1-A0SK-01 | 28.8560 | 1119.1932 | 166.7192 | 0.3152 | 0.0 | 1.891 | 0.0000 | 3.4668 | 0.0 | 0.0000 | ... | 69.0199 | 610.1481 | 1775.6067 | 158.5251 | 1380.7123 | 591.2386 | 1798.9285 | 1335.6445 | 49.4800 | 0.0000 |
| TCGA-A1-A0SQ-01 | 1.0368 | 41.5532 | 75.8447 | 0.0000 | 0.0 | 0.000 | 0.4034 | 5.6480 | 0.0 | 0.0000 | ... | 106.1019 | 617.2466 | 875.0378 | 25.4160 | 969.4402 | 2903.0761 | 715.6833 | 691.4776 | 17.7509 | 0.0000 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 1.8021971134126128e-15 NRMSE: 6.825211563766759e-16 MAPE: 6.64057286959427e-12 Pearson Correlation: 0.0882444001337016 Spearman Correlation: -0.019846844210320947 Coefficient of Determination: -4.887851396935626 RMSE: 0.6805484191845832 NRMSE: 0.33620113286760056 MAPE: 608.7676070377687 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.021017784351607723, tolerance: 0.0026969040165678213 positive)
Pearson Correlation: 0.9999991929292145 Spearman Correlation: 0.999993180656498 Coefficient of Determination: 0.9999980766934268 RMSE: 0.00031079202068551493 NRMSE: 0.00011770195822212266 MAPE: 1.4642773813758136 Pearson Correlation: 0.0002145531134831455 Spearman Correlation: -0.048765974051312076 Coefficient of Determination: -19.597776860120693 RMSE: 1.2728897340028058 NRMSE: 0.6288266323504769 MAPE: 863.1003771347247 Predictor: RandomForests Pearson Correlation: 0.6272313827233392 Spearman Correlation: 0.4571390245826577 Coefficient of Determination: 0.19628834522737648 RMSE: 0.20090730836238904 NRMSE: 0.07608684278068131 MAPE: 208.4581986156724 Pearson Correlation: 0.10132099555535205 Spearman Correlation: 0.24604428836211106 Coefficient of Determination: -0.024134931374286017 RMSE: 0.28383058939108263 NRMSE: 0.14021657093861992 MAPE: 124.97103219935397 Protein: CDH1 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 8.415113195258668e-15 NRMSE: 1.4144711470691793e-15 MAPE: 1.1829576531333859e-11 Pearson Correlation: 0.3597850793490988 Spearman Correlation: 0.4102429031314018 Coefficient of Determination: -3.0813995416294526 RMSE: 2.3441037867452446 NRMSE: 0.37966113613832475 MAPE: 1054.347694483082 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.09439874666957772, tolerance: 0.06837930598298066 positive)
Pearson Correlation: 0.9999999657841724 Spearman Correlation: 0.9999986826268235 Coefficient of Determination: 0.9999999238002917 RMSE: 0.0003114955566482493 NRMSE: 5.235835420104034e-05 MAPE: 0.14302580885352295 Pearson Correlation: 0.01542420071484358 Spearman Correlation: 0.40194127402204666 Coefficient of Determination: -90.53273594182718 RMSE: 11.1009591020982 NRMSE: 1.797959104353309 MAPE: 1887.1585412968407 Predictor: RandomForests Pearson Correlation: 0.7597656415256769 Spearman Correlation: 0.7115265995867018 Coefficient of Determination: 0.5704511124805689 RMSE: 0.7395737714356376 NRMSE: 0.12431273787431087 MAPE: 238.6088370360758 Pearson Correlation: 0.776301176390501 Spearman Correlation: 0.704848307482197 Coefficient of Determination: 0.596065556873585 RMSE: 0.7374417545744626 NRMSE: 0.11943923983260384 MAPE: 157.53617089240265 Protein: CDH2 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999031343205 Coefficient of Determination: 1.0 RMSE: 2.9648864093903507e-15 NRMSE: 1.0953190989557499e-15 MAPE: 1.5103707229882235e-10 Pearson Correlation: 0.06222890395358708 Spearman Correlation: 0.09935128280167789 Coefficient of Determination: -5.537368514256263 RMSE: 0.9591044440133847 NRMSE: 0.49497055478834945 MAPE: 492.2763439807192 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.03416689224445369, tolerance: 0.007399072171665535 positive)
Pearson Correlation: 0.9999996830883624 Spearman Correlation: 0.9999963384771449 Coefficient of Determination: 0.9999992578395328 RMSE: 0.0003197793367479305 NRMSE: 0.00011813620038935395 MAPE: 1.3481958803294603 Pearson Correlation: -0.04663245361604071 Spearman Correlation: 0.002980197053945957 Coefficient of Determination: -38.41138736084696 RMSE: 2.354915246022265 NRMSE: 1.2153146751417996 MAPE: 666.1012637460948 Predictor: RandomForests Pearson Correlation: 0.5871178588760589 Spearman Correlation: 0.5133802603660497 Coefficient of Determination: 0.1837978576646554 RMSE: 0.3353515778679643 NRMSE: 0.12388905927065738 MAPE: 516.4744153385625 Pearson Correlation: 0.0986254225953422 Spearman Correlation: 0.15187298800117063 Coefficient of Determination: 0.009331755452142154 RMSE: 0.37336064731318896 NRMSE: 0.19268237978695824 MAPE: 112.34916685654906 Protein: CDH3 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.3071123996416822e-15 NRMSE: 9.170401860875023e-16 MAPE: 7.871629735138886e-12 Pearson Correlation: 0.1987572101306387 Spearman Correlation: 0.1709150326797386 Coefficient of Determination: -5.288390122520296 RMSE: 0.5130166742494467 NRMSE: 0.392661881079706 MAPE: 1393.5967883322712 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.017680864731117785, tolerance: 0.002341177429816801 positive)
Pearson Correlation: 0.9999989047483114 Spearman Correlation: 0.9999940137011852 Coefficient of Determination: 0.9999975025100869 RMSE: 0.00032997564990721353 NRMSE: 0.00023150337452097262 MAPE: 0.9423741256384887 Pearson Correlation: 0.18340355657680132 Spearman Correlation: 0.21425226807140768 Coefficient of Determination: -7.927312862975741 RMSE: 0.6112545713553861 NRMSE: 0.4678529604483594 MAPE: 1121.52092482215 Predictor: RandomForests Pearson Correlation: 0.6287840173466345 Spearman Correlation: 0.6190658657735031 Coefficient of Determination: 0.3255221903237725 RMSE: 0.17148014988609672 NRMSE: 0.1203065540537806 MAPE: 431.4134737909689 Pearson Correlation: 0.5195480324687831 Spearman Correlation: 0.5293629889766853 Coefficient of Determination: 0.2411933099759418 RMSE: 0.17820805001650078 NRMSE: 0.13640006583684838 MAPE: 289.1901440450669 Protein: PTEN x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 4.602867149388209e-15 NRMSE: 7.197040339908074e-16 MAPE: 4.2087580938553935e-12 Pearson Correlation: 0.007601054476851641 Spearman Correlation: -0.02077358306506682 Coefficient of Determination: -9.66255107126259 RMSE: 1.6217925092092114 NRMSE: 0.5345041556948161 MAPE: 860.1114594134591 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.051512751018478416, tolerance: 0.021075629727119613 positive)
Pearson Correlation: 0.9999998887677379 Spearman Correlation: 0.9999979077014255 Coefficient of Determination: 0.9999997470577795 RMSE: 0.0003150748952429894 NRMSE: 4.9265091899458905e-05 MAPE: 0.4796680661104309 Pearson Correlation: 0.039514744151906284 Spearman Correlation: -0.07514876597405132 Coefficient of Determination: -29.03884126494817 RMSE: 2.7221140425166137 NRMSE: 0.897143906966124 MAPE: 1342.8533524725142 Predictor: RandomForests Pearson Correlation: 0.6142169410243524 Spearman Correlation: 0.5576308466680384 Coefficient of Determination: 0.3080219651782584 RMSE: 0.521133859805886 NRMSE: 0.08148445935515378 MAPE: 292.78607595439905 Pearson Correlation: 0.30533615462130764 Spearman Correlation: 0.32821472077714475 Coefficient of Determination: 0.08231908778716523 RMSE: 0.4757848150997328 NRMSE: 0.15680733475042277 MAPE: 176.75960606743305 Protein: BRCA2 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999031343205 Coefficient of Determination: 1.0 RMSE: 2.63428036239477e-15 NRMSE: 1.7040872798279082e-15 MAPE: 5.695051732024474e-12 Pearson Correlation: 0.1453316141371596 Spearman Correlation: 0.07025420721667404 Coefficient of Determination: -6.078163488937854 RMSE: 0.4914832218055836 NRMSE: 0.491876723184131 MAPE: 1404.7388898834943 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.01728986113387031, tolerance: 0.002096995577721637 positive)
Pearson Correlation: 0.999998739440293 Spearman Correlation: 0.9999923088646853 Coefficient of Determination: 0.9999971400863877 RMSE: 0.00033418586130746087 NRMSE: 0.00021618119448556846 MAPE: 0.7083196466977907 Pearson Correlation: 0.07330938845267011 Spearman Correlation: 0.1128330319396897 Coefficient of Determination: -28.168859220075355 RMSE: 0.9977187270221015 NRMSE: 0.9985175410549456 MAPE: 1043.2106905746666 Predictor: RandomForests Pearson Correlation: 0.6229388426951847 Spearman Correlation: 0.5356983464659656 Coefficient of Determination: 0.20247275783926388 RMSE: 0.17647548243805128 NRMSE: 0.11416006781859371 MAPE: 159.8952856087194 Pearson Correlation: 0.2503292445469252 Spearman Correlation: 0.2668303907308475 Coefficient of Determination: 0.04926271577002239 RMSE: 0.18012693719886436 NRMSE: 0.1802711541221621 MAPE: 124.41936475104178 Protein: CDKN2A x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 6.0278190504948094e-15 NRMSE: 1.3626809201977638e-15 MAPE: 4.456384284556271e-12 Pearson Correlation: 0.37202359318646994 Spearman Correlation: 0.31257438298702567 Coefficient of Determination: -2.2116803791246378 RMSE: 1.3384686726336954 NRMSE: 0.3614552181025373 MAPE: 2576.416887676362 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.049300407555584985, tolerance: 0.02218251593097602 positive)
Pearson Correlation: 0.9999998916342223 Spearman Correlation: 0.9999977333431672 Coefficient of Determination: 0.9999997560683775 RMSE: 0.00031743317311763584 NRMSE: 7.176063594837476e-05 MAPE: 0.19589728646556157 Pearson Correlation: 0.31789076585466086 Spearman Correlation: 0.2921471075992586 Coefficient of Determination: -2.3772393904467366 RMSE: 1.372533567343271 NRMSE: 0.3706544875353149 MAPE: 3034.4827042921247 Predictor: RandomForests Pearson Correlation: 0.6551371220427227 Spearman Correlation: 0.5989365574355994 Coefficient of Determination: 0.41700900406497343 RMSE: 0.4907374273729905 NRMSE: 0.11093871987634009 MAPE: 168.57780749396278 Pearson Correlation: 0.7008637605652488 Spearman Correlation: 0.5833361786050203 Coefficient of Determination: 0.444872245022113 RMSE: 0.5564658566944314 NRMSE: 0.15027433343084834 MAPE: 294.4549319392278 Protein: TP53 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 3.121939820580451e-15 NRMSE: 7.502859458256311e-16 MAPE: 5.069538609027722e-12 Pearson Correlation: 0.1695594457481716 Spearman Correlation: 0.2937762169544435 Coefficient of Determination: -5.665639050816655 RMSE: 1.0859978719234722 NRMSE: 0.3905202890875156 MAPE: 1553.3994405395258 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.03313582504544052, tolerance: 0.011010946742365387 positive)
Pearson Correlation: 0.9999997956273604 Spearman Correlation: 0.9999972683879195 Coefficient of Determination: 0.9999995519691515 RMSE: 0.00030309526169466406 NRMSE: 7.284192782856623e-05 MAPE: 1.614992087094604 Pearson Correlation: 0.12021124626566213 Spearman Correlation: 0.22175397522192958 Coefficient of Determination: -20.325760555680315 RMSE: 1.9424969352078683 NRMSE: 0.6985137672004992 MAPE: 1468.3150807883444 Predictor: RandomForests Pearson Correlation: 0.6587497905889853 Spearman Correlation: 0.569611688258932 Coefficient of Determination: 0.38305446569890156 RMSE: 0.3556711184894722 NRMSE: 0.08547731758939492 MAPE: 599.2266866471739 Pearson Correlation: 0.5311455536845011 Spearman Correlation: 0.5154570285825774 Coefficient of Determination: 0.280552395622339 RMSE: 0.35678588389047716 NRMSE: 0.12829871045002594 MAPE: 474.75252734092 Protein: CTNNB1 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 7.389833797832602e-15 NRMSE: 1.48937537493855e-15 MAPE: 7.890836857599239e-12 Pearson Correlation: 0.19164186063981967 Spearman Correlation: 0.2525412154911716 Coefficient of Determination: -4.017640320516819 RMSE: 1.682152156843582 NRMSE: 0.4173453473040198 MAPE: 683.9855320481236 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.05759797819375021, tolerance: 0.02918679256026189 positive)
Pearson Correlation: 0.9999999168276728 Spearman Correlation: 0.9999986632536627 Coefficient of Determination: 0.9999998162714611 RMSE: 0.0003160052905191773 NRMSE: 6.368891519422321e-05 MAPE: 0.18164661692867573 Pearson Correlation: 0.037195800195863736 Spearman Correlation: 0.20708711345234612 Coefficient of Determination: -33.65605407059733 RMSE: 4.420842775350636 NRMSE: 1.0968200206794612 MAPE: 1128.4498354722368 Predictor: RandomForests Pearson Correlation: 0.6854150980240867 Spearman Correlation: 0.6762031312759877 Coefficient of Determination: 0.455552722102311 RMSE: 0.5439812845942497 NRMSE: 0.10963606920899081 MAPE: 359.35795787897604 Pearson Correlation: 0.5585930145458949 Spearman Correlation: 0.4965466783728417 Coefficient of Determination: 0.3034357496643426 RMSE: 0.6267525422333634 NRMSE: 0.15549857148646937 MAPE: 228.73841504944104 Protein: CCNE1 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 2.7408370616626537e-15 NRMSE: 6.614467895027762e-16 MAPE: 5.957261116947179e-13 Pearson Correlation: 0.44276709641889883 Spearman Correlation: 0.490600916983709 Coefficient of Determination: -1.243400583960463 RMSE: 0.8043777779248283 NRMSE: 0.2865103394211321 MAPE: 137.19867674259757 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.024823410877618236, tolerance: 0.012562459394718587 positive)
Pearson Correlation: 0.9999998692319888 Spearman Correlation: 0.9999956216713326 Coefficient of Determination: 0.9999997207213595 RMSE: 0.0002556048284695251 NRMSE: 6.168516747581271e-05 MAPE: 0.05013721540031273 Pearson Correlation: 0.1943759285655558 Spearman Correlation: 0.3965466783728417 Coefficient of Determination: -7.029438800797044 RMSE: 1.5217707980095962 NRMSE: 0.5420376840639701 MAPE: 139.01714299179068 Predictor: RandomForests Pearson Correlation: 0.8606007856582096 Spearman Correlation: 0.7210171275619577 Coefficient of Determination: 0.7324216110657347 RMSE: 0.25019331988765126 NRMSE: 0.060379206961809796 MAPE: 54.900436092974836 Pearson Correlation: 0.8437410889918155 Spearman Correlation: 0.7073092301909828 Coefficient of Determination: 0.7054583140203942 RMSE: 0.2914607204021061 NRMSE: 0.10381503843351952 MAPE: 43.11131622428974 Protein: CCND1 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.8332254449463847e-15 NRMSE: 1.1020821229433244e-15 MAPE: 3.530109391713031e-12 Pearson Correlation: 0.14423645310143496 Spearman Correlation: 0.1359916105745781 Coefficient of Determination: -3.6091616691076975 RMSE: 0.5044074195037763 NRMSE: 0.3592440740582989 MAPE: 2835.265623086868 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.018430004322999623, tolerance: 0.0030646775987981157 positive)
Pearson Correlation: 0.9999995467106606 Spearman Correlation: 0.9999961834923413 Coefficient of Determination: 0.9999989209588032 RMSE: 0.00024815570681913166 NRMSE: 0.000149184034590862 MAPE: 0.3634238338900677 Pearson Correlation: 0.031197768194176297 Spearman Correlation: 0.11567164179104479 Coefficient of Determination: -17.10047142438873 RMSE: 0.9995751216132994 NRMSE: 0.7119075277856671 MAPE: 7334.102699435865 Predictor: RandomForests Pearson Correlation: 0.579054014722051 Spearman Correlation: 0.5632435324579738 Coefficient of Determination: 0.2668447730674811 RMSE: 0.2045517605073681 NRMSE: 0.1229706030391411 MAPE: 334.17733988085394 Pearson Correlation: 0.4693725510965298 Spearman Correlation: 0.4644034728319189 Coefficient of Determination: 0.20287465013282902 RMSE: 0.2097653763931505 NRMSE: 0.1493970260905009 MAPE: 993.1743665645035 Protein: ERBB2 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 5.613920580545507e-15 NRMSE: 9.564237662138623e-16 MAPE: 8.788690067309418e-12 Pearson Correlation: 0.37219143150833356 Spearman Correlation: 0.37423178226514486 Coefficient of Determination: -2.8207760569539793 RMSE: 1.7729743960888051 NRMSE: 0.32875475544016414 MAPE: 1066.7315125986804 Predictor: ElasticNet Pearson Correlation: 0.9999999471815921 Spearman Correlation: 0.9999980239401592 Coefficient of Determination: 0.9999998909341865 RMSE: 0.0003365711802383765 NRMSE: 5.734043992680657e-05 MAPE: 0.3728926981299305 Pearson Correlation: 0.33056577584623803 Spearman Correlation: 0.456370110233148 Coefficient of Determination: -9.521804108761257 RMSE: 2.9421972017719193 NRMSE: 0.5455585391752122 MAPE: 1144.6287015380428 Predictor: RandomForests Pearson Correlation: 0.8596219029631054 Spearman Correlation: 0.7082643397998256 Coefficient of Determination: 0.7321092492310639 RMSE: 0.5274866392598224 NRMSE: 0.08986603050578776 MAPE: 414.8371281483654 Pearson Correlation: 0.8075264919583662 Spearman Correlation: 0.6899912203687445 Coefficient of Determination: 0.6429880574572684 RMSE: 0.5419610108771445 NRMSE: 0.10049341940981728 MAPE: 265.6331356020632 Protein: ERBB3 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 3.1232551450168953e-15 NRMSE: 8.428769211508649e-16 MAPE: 1.959209501340385e-12 Pearson Correlation: 0.06657223071359954 Spearman Correlation: 0.07223450423684065 Coefficient of Determination: -3.9219848498383625 RMSE: 1.0327795301033864 NRMSE: 0.41441140621123296 MAPE: 783.0619635313943 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.04192491925950205, tolerance: 0.011320379923715432 positive)
Pearson Correlation: 0.9999997716982499 Spearman Correlation: 0.9999957766564183 Coefficient of Determination: 0.9999994757582166 RMSE: 0.00033243686230395624 NRMSE: 8.97151676586118e-05 MAPE: 0.2365533220167904 Pearson Correlation: 0.21663484441014155 Spearman Correlation: 0.20972369735126478 Coefficient of Determination: -13.870391784018297 RMSE: 1.7951415150329595 NRMSE: 0.7203155154696967 MAPE: 1666.938545695875 Predictor: RandomForests Pearson Correlation: 0.5865704113336566 Spearman Correlation: 0.5721185563285387 Coefficient of Determination: 0.31113084881782116 RMSE: 0.38107611299323657 NRMSE: 0.10284150539425135 MAPE: 233.64671014730476 Pearson Correlation: 0.41042022134690065 Spearman Correlation: 0.42802444160763076 Coefficient of Determination: 0.16039126918351698 RMSE: 0.4265559047993366 NRMSE: 0.17115911691036553 MAPE: 275.94069948090294 Fold: 2 Protein: RB1 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 1.7455859247708337e-15 NRMSE: 6.383798730144945e-16 MAPE: 5.007056367034697e-12 Pearson Correlation: -0.0897970093216317 Spearman Correlation: -0.07673397717295875 Coefficient of Determination: -7.162561669170607 RMSE: 0.6996956631347776 NRMSE: 0.40087524099344435 MAPE: 1613.5988844252083 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.023471813026426147, tolerance: 0.0029666208701464043 positive)
Pearson Correlation: 0.9999991548176731 Spearman Correlation: 0.9999938005968164 Coefficient of Determination: 0.9999979570931449 RMSE: 0.00033594498619334375 NRMSE: 0.00012285875738492677 MAPE: 0.8197456352320328 Pearson Correlation: -0.0737690225933205 Spearman Correlation: 0.03301629109355185 Coefficient of Determination: -4015.8367803977726 RMSE: 15.52165538318111 NRMSE: 8.892791066437368 MAPE: 2779.814993987421 Predictor: RandomForests Pearson Correlation: 0.6408110570086731 Spearman Correlation: 0.47950207782708737 Coefficient of Determination: 0.21073233491798848 RMSE: 0.20881228048124198 NRMSE: 0.07636493581086966 MAPE: 169.56108935571132 Pearson Correlation: 0.17498004138245404 Spearman Correlation: 0.2776558384547849 Coefficient of Determination: 0.011180700878588135 RMSE: 0.24353108933230627 NRMSE: 0.13952578137772356 MAPE: 187.84912273676755 Protein: CDH1 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 8.881268189459346e-15 NRMSE: 1.4247642880339047e-15 MAPE: 8.228738761639293e-12 Pearson Correlation: 0.3508251713281272 Spearman Correlation: 0.42210028289922935 Coefficient of Determination: -2.2119265562256585 RMSE: 2.0621236010769675 NRMSE: 0.3662091282324574 MAPE: 1134.7001172141306 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.10371126316276937, tolerance: 0.0674331510902594 positive)
Pearson Correlation: 0.9999999538731201 Spearman Correlation: 0.9999982176715847 Coefficient of Determination: 0.9999998983387258 RMSE: 0.0003572953454394937 NRMSE: 5.731857631178209e-05 MAPE: 0.28878209748374 Pearson Correlation: 0.12244136830824323 Spearman Correlation: 0.365822846551556 Coefficient of Determination: -10119.637135760673 RMSE: 115.75394916026289 NRMSE: 20.55655286099501 MAPE: 1441.0729794526467 Predictor: RandomForests Pearson Correlation: 0.7847453702345519 Spearman Correlation: 0.7024800794534966 Coefficient of Determination: 0.6115043289541224 RMSE: 0.6984618280233663 NRMSE: 0.1120497037015106 MAPE: 231.32465308839934 Pearson Correlation: 0.6767152066143682 Spearman Correlation: 0.6610743455530761 Coefficient of Determination: 0.418170303284368 RMSE: 0.8776671260241866 NRMSE: 0.15586345693912032 MAPE: 202.19063268404028 Protein: CDH2 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 2.7446135410919547e-15 NRMSE: 9.944972610667277e-16 MAPE: 1.238876438797943e-11 Pearson Correlation: 0.05067394981816535 Spearman Correlation: 0.10635059994146914 Coefficient of Determination: -5.231861673634375 RMSE: 0.9662957250912259 NRMSE: 0.5090670093254165 MAPE: 1714.0676926936355 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.032336275884172705, tolerance: 0.007276153902921154 positive)
Pearson Correlation: 0.9999996484357432 Spearman Correlation: 0.9999962803579465 Coefficient of Determination: 0.9999991874110518 RMSE: 0.00033181747262252275 NRMSE: 0.00012023243445993288 MAPE: 1.8878751741971032 Pearson Correlation: 0.007070347333436058 Spearman Correlation: 0.1327431470100478 Coefficient of Determination: -1489.169894965548 RMSE: 14.942354941354022 NRMSE: 7.871979296561437 MAPE: 8289.684579078732 Predictor: RandomForests Pearson Correlation: 0.5717445692883921 Spearman Correlation: 0.5205080333613149 Coefficient of Determination: 0.18093923965146275 RMSE: 0.3331362214635573 NRMSE: 0.1207102766372771 MAPE: 677.885099274611 Pearson Correlation: 0.12359462755362784 Spearman Correlation: 0.2032728514291289 Coefficient of Determination: 0.005938321669324509 RMSE: 0.38592936214752954 NRMSE: 0.203316542853132 MAPE: 120.91746532520932 Protein: CDH3 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 1.4072907107537374e-15 NRMSE: 1.0591246609572578e-15 MAPE: 4.065321486198243e-12 Pearson Correlation: 0.020948203350941778 Spearman Correlation: 0.1633547946541801 Coefficient of Determination: -5.658956493720352 RMSE: 0.5107509919666359 NRMSE: 0.4202674170712054 MAPE: 3659.146114612282 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.018509477697200558, tolerance: 0.002316729479435792 positive)
Pearson Correlation: 0.9999990755341677 Spearman Correlation: 0.999994769253362 Coefficient of Determination: 0.9999978670022952 RMSE: 0.000303351197488064 NRMSE: 0.0002283016094225794 MAPE: 0.7979600153372367 Pearson Correlation: 0.013856071890185753 Spearman Correlation: 0.19276168178714276 Coefficient of Determination: -51.309056455907616 RMSE: 1.4315106165367044 NRMSE: 1.1779071970186001 MAPE: 4202.638742507781 Predictor: RandomForests Pearson Correlation: 0.6438288888563345 Spearman Correlation: 0.6398376763706062 Coefficient of Determination: 0.3574218639727864 RMSE: 0.16649971399168753 NRMSE: 0.12530740932445833 MAPE: 236.34958909823695 Pearson Correlation: 0.3079573133246542 Spearman Correlation: 0.39446883230904306 Coefficient of Determination: -0.03658570348306345 RMSE: 0.20151563038274128 NRMSE: 0.16581554380214047 MAPE: 1221.7909010675075 Protein: PTEN x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 4.062789036198294e-15 NRMSE: 6.352574523021333e-16 MAPE: 7.77649574459296e-12 Pearson Correlation: 0.07938822669093776 Spearman Correlation: 0.057335869671251594 Coefficient of Determination: -5.799161753260051 RMSE: 1.3340860069284008 NRMSE: 0.4474396320527237 MAPE: 2649.7478861063996 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.05484752657638759, tolerance: 0.020892714789331884 positive)
Pearson Correlation: 0.9999998741361235 Spearman Correlation: 0.9999984501492041 Coefficient of Determination: 0.9999997162041391 RMSE: 0.00033228697916182746 NRMSE: 5.195637231832186e-05 MAPE: 0.543448903810121 Pearson Correlation: 0.1251321086981299 Spearman Correlation: 0.015735050239001073 Coefficient of Determination: -13343.731421270812 RMSE: 59.10320894416733 NRMSE: 19.822648559218987 MAPE: 3304.303296646198 Predictor: RandomForests Pearson Correlation: 0.598630678565816 Spearman Correlation: 0.5400931292360969 Coefficient of Determination: 0.3045485899489807 RMSE: 0.5201680712491049 NRMSE: 0.08133344871379954 MAPE: 229.23579609236495 Pearson Correlation: 0.3032573396621051 Spearman Correlation: 0.34571851538938847 Coefficient of Determination: 0.07756884705550093 RMSE: 0.49138638957040237 NRMSE: 0.16480627501019668 MAPE: 534.5842882575141 Protein: BRCA2 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 0.9999999225074571 Coefficient of Determination: 1.0 RMSE: 1.416323054455991e-15 NRMSE: 9.124323108107529e-16 MAPE: 3.598638428904126e-12 Pearson Correlation: 0.01494802272144909 Spearman Correlation: 0.15205345819920008 Coefficient of Determination: -10.781014744553657 RMSE: 0.6630876584776031 NRMSE: 0.44884193678975115 MAPE: 751.3819533090008 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.017269718384724877, tolerance: 0.0020487419647026942 positive)
Pearson Correlation: 0.9999986163244929 Spearman Correlation: 0.9999928319395165 Coefficient of Determination: 0.9999968043804497 RMSE: 0.0003491676688993091 NRMSE: 0.00022494293374089813 MAPE: 0.7654710610009428 Pearson Correlation: -0.06914640588600524 Spearman Correlation: 0.13305043410398987 Coefficient of Determination: -143.15687876193533 RMSE: 2.3195155069611344 NRMSE: 1.570072703431958 MAPE: 823.0222172139742 Predictor: RandomForests Pearson Correlation: 0.5850528054271259 Spearman Correlation: 0.5202907256843711 Coefficient of Determination: 0.20244452627695853 RMSE: 0.174436329149854 NRMSE: 0.11237644010298212 MAPE: 161.81243660430286 Pearson Correlation: 0.3121886297837118 Spearman Correlation: 0.3265827724124476 Coefficient of Determination: 0.06638933397739155 RMSE: 0.1866648292496567 NRMSE: 0.1263528319668975 MAPE: 155.83934569970324 Protein: CDKN2A x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 4.511621657760097e-15 NRMSE: 1.0199212518955795e-15 MAPE: 5.166895684734287e-12 Pearson Correlation: 0.23977670822713132 Spearman Correlation: 0.2800019510291679 Coefficient of Determination: -3.7264617245694707 RMSE: 1.4640706111540254 NRMSE: 0.39552372248595885 MAPE: 1762.2609489162908 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.058277317240264144, tolerance: 0.023629428078437084 positive)
Pearson Correlation: 0.9999998700957236 Spearman Correlation: 0.9999985276417437 Coefficient of Determination: 0.9999997143329805 RMSE: 0.00035454348886142413 NRMSE: 8.01499918303208e-05 MAPE: 0.3803798214443014 Pearson Correlation: 0.14006566281012617 Spearman Correlation: 0.2808994244463955 Coefficient of Determination: -27259.902848204765 RMSE: 111.18957438984343 NRMSE: 30.03824680944549 MAPE: 2913.8929985117134 Predictor: RandomForests Pearson Correlation: 0.6604659584352119 Spearman Correlation: 0.6114815782108334 Coefficient of Determination: 0.42014694615609505 RMSE: 0.5051245035576389 NRMSE: 0.11419113904320988 MAPE: 169.04503880537638 Pearson Correlation: 0.6909991554079237 Spearman Correlation: 0.5516388645010243 Coefficient of Determination: 0.44078293412215797 RMSE: 0.503598187736041 NRMSE: 0.13604878639940593 MAPE: 117.81012350096718 Protein: TP53 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.7724541643423523e-15 NRMSE: 7.425884998908135e-16 MAPE: 3.3072936302344763e-12 Pearson Correlation: 0.20754787323470436 Spearman Correlation: 0.20132182226124282 Coefficient of Determination: -2.4820547753990514 RMSE: 0.7639204188335845 NRMSE: 0.25157925863118213 MAPE: 2965.2535092109565 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.03638971928312777, tolerance: 0.011132998655991638 positive)
Pearson Correlation: 0.9999998201839372 Spearman Correlation: 0.9999964934625065 Coefficient of Determination: 0.9999996016233614 RMSE: 0.00028738617149873924 NRMSE: 7.697500241026898e-05 MAPE: 0.48790250450704137 Pearson Correlation: 0.1816262418416041 Spearman Correlation: 0.2764315676519364 Coefficient of Determination: -78.98608848106274 RMSE: 3.661318826407402 NRMSE: 1.2057694142622764 MAPE: 3563.799578866972 Predictor: RandomForests Pearson Correlation: 0.6817242960852894 Spearman Correlation: 0.5995204023693445 Coefficient of Determination: 0.3943448703845094 RMSE: 0.3543493458721129 NRMSE: 0.09491076627082173 MAPE: 300.43384517655204 Pearson Correlation: 0.5868677106276413 Spearman Correlation: 0.4781246684774168 Coefficient of Determination: 0.30902329369383663 RMSE: 0.3403000576238626 NRMSE: 0.11206983620084393 MAPE: 1902.4641587392275 Protein: CTNNB1 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 4.790267179233388e-15 NRMSE: 9.422240714463787e-16 MAPE: 5.7848712104444025e-12 Pearson Correlation: 0.2867790589935633 Spearman Correlation: 0.35330211686664714 Coefficient of Determination: -2.236196562591265 RMSE: 1.3789514683227644 NRMSE: 0.3431849551585985 MAPE: 575.1692943717931 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.06157982031387442, tolerance: 0.028224784501103505 positive)
Pearson Correlation: 0.9999998925966285 Spearman Correlation: 0.9999987019998846 Coefficient of Determination: 0.9999997618232329 RMSE: 0.00035381632931335904 NRMSE: 6.959408523079447e-05 MAPE: 0.33617920239478816 Pearson Correlation: 0.07157710424508566 Spearman Correlation: 0.392790947224661 Coefficient of Determination: -7473.918008482289 RMSE: 66.27271338260564 NRMSE: 16.49354505428079 MAPE: 1259.199759923223 Predictor: RandomForests Pearson Correlation: 0.6733881171255208 Spearman Correlation: 0.637588893877042 Coefficient of Determination: 0.44245942954562645 RMSE: 0.5413353798837749 NRMSE: 0.1064782415192319 MAPE: 415.48937777643386 Pearson Correlation: 0.5707589520447683 Spearman Correlation: 0.5513169446883233 Coefficient of Determination: 0.2825515656075819 RMSE: 0.6492723100127668 NRMSE: 0.16158689679519345 MAPE: 209.18183478452792 Protein: CCNE1 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.5932952218741973e-15 NRMSE: 6.258404860086872e-16 MAPE: 4.582916449588201e-13 Pearson Correlation: 0.39839900825077856 Spearman Correlation: 0.3513998634279583 Coefficient of Determination: -3.133875580018529 RMSE: 0.8504305824676762 NRMSE: 0.46219304586855164 MAPE: 109.70142016074189 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.025431933782338385, tolerance: 0.014120986618491432 positive)
Pearson Correlation: 0.9999998720000989 Spearman Correlation: 0.9999954085669283 Coefficient of Determination: 0.9999997307738208 RMSE: 0.0002660749700057963 NRMSE: 6.421192895378438e-05 MAPE: 0.04589632926232462 Pearson Correlation: 0.46932387385049007 Spearman Correlation: 0.4415666764218126 Coefficient of Determination: -4.21512180443168 RMSE: 0.9551957842665365 NRMSE: 0.5191309649870579 MAPE: 111.49841460298092 Predictor: RandomForests Pearson Correlation: 0.8638022197417591 Spearman Correlation: 0.7119901371220206 Coefficient of Determination: 0.7401658535381153 RMSE: 0.26139272112953904 NRMSE: 0.06308196083923523 MAPE: 67.63998343878626 Pearson Correlation: 0.8385341994000939 Spearman Correlation: 0.7373940873709675 Coefficient of Determination: 0.7004107442814143 RMSE: 0.22894084737259135 NRMSE: 0.12442504979515724 MAPE: 40.083286967987746 Protein: CCND1 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.7743432856151517e-15 NRMSE: 1.0666838715508722e-15 MAPE: 3.860995296554132e-12 Pearson Correlation: 0.20232081971631474 Spearman Correlation: 0.18167983611354993 Coefficient of Determination: -2.5692609336695025 RMSE: 0.4447851217169975 NRMSE: 0.34411177950501143 MAPE: 1060.079957855323 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.017879576436577286, tolerance: 0.003060830225233494 positive)
Pearson Correlation: 0.9999992302333355 Spearman Correlation: 0.9999951760893047 Coefficient of Determination: 0.9999983056368075 RMSE: 0.0003107675987167557 NRMSE: 0.00018682449334308574 MAPE: 1.104218479902409 Pearson Correlation: -0.0428753883585951 Spearman Correlation: 0.09776607160277048 Coefficient of Determination: -10055.57845524776 RMSE: 23.609469310667777 NRMSE: 18.265666050835378 MAPE: 5441.389378792569 Predictor: RandomForests Pearson Correlation: 0.5874008525570518 Spearman Correlation: 0.5867358613066394 Coefficient of Determination: 0.3071707357542959 RMSE: 0.1987218353340639 NRMSE: 0.11946582061900417 MAPE: 485.9098140425688 Pearson Correlation: 0.2509497279099485 Spearman Correlation: 0.38588430397034434 Coefficient of Determination: 0.0441532482743614 RMSE: 0.23017345488073088 NRMSE: 0.17807564436523712 MAPE: 303.56623192582737 Protein: ERBB2 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 4.402168730477895e-15 NRMSE: 7.900092835055354e-16 MAPE: 3.702789598908503e-12 Pearson Correlation: 0.5488111622102263 Spearman Correlation: 0.37595844307872406 Coefficient of Determination: -0.2702367931356471 RMSE: 1.1915167599479222 NRMSE: 0.20299449033986783 MAPE: 1712.9265303563684 Predictor: ElasticNet Pearson Correlation: 0.9999999470013479 Spearman Correlation: 0.9999978495818974 Coefficient of Determination: 0.999999890422511 RMSE: 0.00032540037164901614 NRMSE: 5.839606116846116e-05 MAPE: 0.20367473201907976 Pearson Correlation: 0.18377217771090526 Spearman Correlation: 0.34769290800897473 Coefficient of Determination: -21.85041108046025 RMSE: 5.053646037043408 NRMSE: 0.860971776588822 MAPE: 7138.887139474675 Predictor: RandomForests Pearson Correlation: 0.8551524396804958 Spearman Correlation: 0.7088470552473661 Coefficient of Determination: 0.7277140135207274 RMSE: 0.5129440751277077 NRMSE: 0.09205248732618625 MAPE: 260.1710689417386 Pearson Correlation: 0.780881798009729 Spearman Correlation: 0.5009699296697576 Coefficient of Determination: 0.5899826546362483 RMSE: 0.676953637507216 NRMSE: 0.11533019362270917 MAPE: 1505.8430427613173 Protein: ERBB3 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999997868954927 Coefficient of Determination: 1.0 RMSE: 3.2712742794520742e-15 NRMSE: 8.828230371456452e-16 MAPE: 2.14382896403547e-12 Pearson Correlation: -0.08456910971696317 Spearman Correlation: -0.019485903814262025 Coefficient of Determination: -4.36179219785531 RMSE: 1.1989373079730166 NRMSE: 0.44247923411771395 MAPE: 788.5439766905455 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.041474924134142936, tolerance: 0.01064030272396596 positive)
Pearson Correlation: 0.9999997147406067 Spearman Correlation: 0.9999950211032799 Coefficient of Determination: 0.9999993622223236 RMSE: 0.0003554876407386821 NRMSE: 9.593591116341033e-05 MAPE: 0.2344349834050121 Pearson Correlation: -0.028334541792849364 Spearman Correlation: 0.002136376938835236 Coefficient of Determination: -1566.941851883234 RMSE: 20.502483056139436 NRMSE: 7.566636670544044 MAPE: 3860.9773615478125 Predictor: RandomForests Pearson Correlation: 0.5952203837071159 Spearman Correlation: 0.5957677983852488 Coefficient of Determination: 0.31943750534092963 RMSE: 0.3672179104776954 NRMSE: 0.09910157428819973 MAPE: 194.7908754411427 Pearson Correlation: 0.43183965188491347 Spearman Correlation: 0.436145785955092 Coefficient of Determination: 0.17145075379285502 RMSE: 0.4713034823208974 NRMSE: 0.1739390396041089 MAPE: 355.4400054154177 Fold: 3 Protein: RB1 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.0011527245881867e-15 NRMSE: 7.318434481378681e-16 MAPE: 9.156399971027535e-12 Pearson Correlation: 0.19744230900229212 Spearman Correlation: 0.1212060000748139 Coefficient of Determination: -5.304318184884034 RMSE: 0.556565557935543 NRMSE: 0.39053395311025085 MAPE: 1784.7735125424222 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.024647913533805934, tolerance: 0.003113905664439024 positive)
Pearson Correlation: 0.9999993224170491 Spearman Correlation: 0.9999913691425809 Coefficient of Determination: 0.9999983085480368 RMSE: 0.0003128898118727999 NRMSE: 0.00011442722786454063 MAPE: 1.2703654948355287 Pearson Correlation: 0.09862229766858205 Spearman Correlation: 0.12397910198381527 Coefficient of Determination: -10.086007270017706 RMSE: 0.7380484027255529 NRMSE: 0.5178778244421972 MAPE: 2205.456747655461 Predictor: RandomForests Pearson Correlation: 0.6349614266898858 Spearman Correlation: 0.4590509289037504 Coefficient of Determination: 0.19645911789787862 RMSE: 0.21565800167736524 NRMSE: 0.07886849095866195 MAPE: 178.01633430691177 Pearson Correlation: 0.15920294720389952 Spearman Correlation: 0.18795994962530704 Coefficient of Determination: 0.0032368466507003424 RMSE: 0.2213060327348093 NRMSE: 0.15528722282358878 MAPE: 225.61839760918326 Protein: CDH1 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 9.282666365085397e-15 NRMSE: 1.4780845140418134e-15 MAPE: 8.382876175626003e-12 Pearson Correlation: 0.26497172707074135 Spearman Correlation: 0.23330714846818543 Coefficient of Determination: -2.290760176111855 RMSE: 1.7079959416963768 NRMSE: 0.3357834195133049 MAPE: 1166.7349373943384 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.08481727971522758, tolerance: 0.07424076431120771 positive)
Pearson Correlation: 0.9999999780681371 Spearman Correlation: 0.9999987670203686 Coefficient of Determination: 0.9999999513665873 RMSE: 0.0002590582650214385 NRMSE: 4.125000239187263e-05 MAPE: 0.24493287732911462 Pearson Correlation: 0.14782092657532858 Spearman Correlation: 0.16924151173954788 Coefficient of Determination: -6.32856664923503 RMSE: 2.5488732466586073 NRMSE: 0.5010956722876986 MAPE: 1153.751557208796 Predictor: RandomForests Pearson Correlation: 0.7646307349689784 Spearman Correlation: 0.7160206269379776 Coefficient of Determination: 0.580656675362581 RMSE: 0.7607026800728253 NRMSE: 0.12112714245928875 MAPE: 275.3291795368894 Pearson Correlation: 0.7618933024815675 Spearman Correlation: 0.5376763742117598 Coefficient of Determination: 0.564876732884467 RMSE: 0.621076177370003 NRMSE: 0.12210045558329788 MAPE: 160.58626356673656 Protein: CDH2 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999807346924 Coefficient of Determination: 1.0 RMSE: 2.7724578733446926e-15 NRMSE: 1.0045865183508562e-15 MAPE: 6.37989004117719e-11 Pearson Correlation: 0.16510451772554838 Spearman Correlation: 0.19312210875447325 Coefficient of Determination: -5.130182493355753 RMSE: 0.8219522326705191 NRMSE: 0.4330896751483335 MAPE: 15896.545852348361 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.035296550539843645, tolerance: 0.007819420435861616 positive)
Pearson Correlation: 0.9999997785249639 Spearman Correlation: 0.9999973799181833 Coefficient of Determination: 0.9999994584118045 RMSE: 0.0002805632215103452 NRMSE: 0.00010166070784489645 MAPE: 0.7657484182942037 Pearson Correlation: 0.12150295560770354 Spearman Correlation: 0.15850821082557143 Coefficient of Determination: -8.03085890252107 RMSE: 0.9976412691806256 NRMSE: 0.5256608790759298 MAPE: 13476.464895153802 Predictor: RandomForests Pearson Correlation: 0.5832602351607864 Spearman Correlation: 0.5427425891371103 Coefficient of Determination: 0.1916963398440733 RMSE: 0.3427546988987798 NRMSE: 0.12419548478106378 MAPE: 292.4926322919586 Pearson Correlation: -0.05888604504039477 Spearman Correlation: -0.02836693724360653 Coefficient of Determination: -0.037381940453786955 RMSE: 0.33812650797307886 NRMSE: 0.17816010916026245 MAPE: 1540.8939044056315 Protein: CDH3 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.9999999999999996 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.3657686541483347e-15 NRMSE: 9.581920736854792e-16 MAPE: 4.3377524320242945e-12 Pearson Correlation: 0.02025163807267995 Spearman Correlation: 0.00085537226149952 Coefficient of Determination: -3.512745194141382 RMSE: 0.4000699438873232 NRMSE: 0.34798676479974533 MAPE: 699.6897036053508 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.016142862467912533, tolerance: 0.0024296509859561446 positive)
Pearson Correlation: 0.9999993379540705 Spearman Correlation: 0.9999956075100636 Coefficient of Determination: 0.9999984805941059 RMSE: 0.0002619495832727582 NRMSE: 0.00018377784087722274 MAPE: 0.4966035927522255 Pearson Correlation: 0.005938367248616376 Spearman Correlation: 0.05044701305502563 Coefficient of Determination: -7.8197070608221715 RMSE: 0.5592971411450531 NRMSE: 0.48648494015243776 MAPE: 1102.3869631386533 Predictor: RandomForests Pearson Correlation: 0.6534763496232535 Spearman Correlation: 0.6529474435881956 Coefficient of Determination: 0.35388850972239505 RMSE: 0.17081835715487015 NRMSE: 0.11984225539854504 MAPE: 461.346802244246 Pearson Correlation: 0.365212651153748 Spearman Correlation: 0.37748849736281004 Coefficient of Determination: 0.1282033171237169 RMSE: 0.17584220670352718 NRMSE: 0.1529501567436979 MAPE: 193.80106036791304 Protein: PTEN x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.987364845839635e-15 NRMSE: 6.234641303791158e-16 MAPE: 4.55779111893747e-12 Pearson Correlation: 0.1138234459319727 Spearman Correlation: 0.17730146261175328 Coefficient of Determination: -7.897024813163753 RMSE: 1.4047691460695462 NRMSE: 0.33586026540179464 MAPE: 648.9291930093221 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.05537348856275895, tolerance: 0.02130541006350738 positive)
Pearson Correlation: 0.9999999226802161 Spearman Correlation: 0.9999983046530069 Coefficient of Determination: 0.9999998156315534 RMSE: 0.0002702073194861657 NRMSE: 4.224960042000871e-05 MAPE: 0.4553440848654231 Pearson Correlation: 0.1648769684603799 Spearman Correlation: 0.20400004987593362 Coefficient of Determination: -8.414214905895994 RMSE: 1.4450225122646034 NRMSE: 0.3454842710908534 MAPE: 648.1031261264217 Predictor: RandomForests Pearson Correlation: 0.6202655327361959 Spearman Correlation: 0.5331642042460083 Coefficient of Determination: 0.29778512958999714 RMSE: 0.527337701503597 NRMSE: 0.0824544916743956 MAPE: 284.67824299607315 Pearson Correlation: 0.4040717926029437 Spearman Correlation: 0.42465616778264065 Coefficient of Determination: 0.14920496281713314 RMSE: 0.43440521774332796 NRMSE: 0.10386009126938459 MAPE: 104.95760962577098 Protein: BRCA2 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 1.2308458227633407e-15 NRMSE: 8.295674539423481e-16 MAPE: 2.7787613007211558e-12 Pearson Correlation: -0.03799617151071156 Spearman Correlation: 0.008730782179328921 Coefficient of Determination: -2.9642043380810903 RMSE: 0.42634228823947307 NRMSE: 0.2932424655506765 MAPE: 1135.3279176164376 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.015597850354654478, tolerance: 0.0019432053784754488 positive)
Pearson Correlation: 0.9999986190236155 Spearman Correlation: 0.999994605713906 Coefficient of Determination: 0.99999685644652 RMSE: 0.00033696022593325136 NRMSE: 0.00022710499685469723 MAPE: 1.223242799869991 Pearson Correlation: -0.03682515892013543 Spearman Correlation: 0.015793214379231663 Coefficient of Determination: -5.215262983439315 RMSE: 0.5338388180565747 NRMSE: 0.3671796477426592 MAPE: 1091.779504926671 Predictor: RandomForests Pearson Correlation: 0.6138453178052498 Spearman Correlation: 0.5529402943461567 Coefficient of Determination: 0.21985035978453826 RMSE: 0.16786384645232277 NRMSE: 0.1131371461275192 MAPE: 153.90267732812802 Pearson Correlation: 0.11953375809206299 Spearman Correlation: 0.18237384506041224 Coefficient of Determination: 0.012197815271204226 RMSE: 0.21282144457739094 NRMSE: 0.14638070595257616 MAPE: 179.08710781552207 Protein: CDKN2A x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 5.0620238512257e-15 NRMSE: 1.1818322402002475e-15 MAPE: 4.709728479269997e-12 Pearson Correlation: 0.13749600027117614 Spearman Correlation: 0.19139640145138967 Coefficient of Determination: -2.68463525747188 RMSE: 1.260257368400085 NRMSE: 0.38907640035815044 MAPE: 589.0769429431367 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.054257344411802994, tolerance: 0.02397725168374273 positive)
Pearson Correlation: 0.9999999203593388 Spearman Correlation: 0.9999984395101242 Coefficient of Determination: 0.9999998193037003 RMSE: 0.00028378092028742994 NRMSE: 6.625441732523113e-05 MAPE: 0.2558368379781468 Pearson Correlation: 0.06743005585906757 Spearman Correlation: 0.04121497774286463 Coefficient of Determination: -3.5778729248082515 RMSE: 1.4047332431176476 NRMSE: 0.4336801096346663 MAPE: 629.8072108708882 Predictor: RandomForests Pearson Correlation: 0.6714673469116417 Spearman Correlation: 0.6049265402209965 Coefficient of Determination: 0.4409449215094673 RMSE: 0.49915550098576533 NRMSE: 0.1165379858483763 MAPE: 177.40218999758505 Pearson Correlation: 0.6019656717774668 Spearman Correlation: 0.5720146136485493 Coefficient of Determination: 0.35543429531675297 RMSE: 0.5271031247287383 NRMSE: 0.16273135276118006 MAPE: 106.88276546725974 Protein: TP53 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.193075148895659e-15 NRMSE: 7.673816748127035e-16 MAPE: 7.2699277955965556e-12 Pearson Correlation: 0.1366241690513068 Spearman Correlation: 0.12784947443234954 Coefficient of Determination: -2.228955741718939 RMSE: 0.7734853292963992 NRMSE: 0.2884320444556974 MAPE: 1049.9027350764397 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.033051166514434634, tolerance: 0.010899962745861313 positive)
Pearson Correlation: 0.9999998478105327 Spearman Correlation: 0.9999971487346024 Coefficient of Determination: 0.9999996605510492 RMSE: 0.0002622458379529172 NRMSE: 6.302471472072032e-05 MAPE: 0.5006877669609924 Pearson Correlation: 0.15820207994059646 Spearman Correlation: 0.19550119078791509 Coefficient of Determination: -3.481515368067301 RMSE: 0.9112414778339766 NRMSE: 0.3398011991818505 MAPE: 967.1647059879809 Predictor: RandomForests Pearson Correlation: 0.6771238092658958 Spearman Correlation: 0.5832017628210413 Coefficient of Determination: 0.3957126358987394 RMSE: 0.34989934177888216 NRMSE: 0.08409020470533098 MAPE: 505.2938142491085 Pearson Correlation: 0.4980266397715637 Spearman Correlation: 0.38444705188482126 Coefficient of Determination: 0.23158902742845922 RMSE: 0.3773269399586351 NRMSE: 0.14070490621907644 MAPE: 410.3498211979149 Protein: CTNNB1 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 5.311859136279035e-15 NRMSE: 1.0448188702358448e-15 MAPE: 3.1176201649811237e-12 Pearson Correlation: 0.1977695823120523 Spearman Correlation: 0.24405541216224644 Coefficient of Determination: -3.2335545193445743 RMSE: 1.261223520582682 NRMSE: 0.4123127662174906 MAPE: 6307.616138164273 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.05946326592761994, tolerance: 0.03183156097646061 positive)
Pearson Correlation: 0.9999999375423231 Spearman Correlation: 0.9999989596733967 Coefficient of Determination: 0.9999998605437576 RMSE: 0.0002872478653862805 NRMSE: 5.650036691311576e-05 MAPE: 0.13903815873218736 Pearson Correlation: 0.18907640277129945 Spearman Correlation: 0.21624957917181015 Coefficient of Determination: -6.84427238716238 RMSE: 1.7167846271169236 NRMSE: 0.5612424816492606 MAPE: 2440.1658279301664 Predictor: RandomForests Pearson Correlation: 0.6784087920935347 Spearman Correlation: 0.6934422973987062 Coefficient of Determination: 0.45255697382183624 RMSE: 0.5691245162843038 NRMSE: 0.11194424002445001 MAPE: 243.34908136790054 Pearson Correlation: 0.49770241440043217 Spearman Correlation: 0.4561528198605968 Coefficient of Determination: 0.24026074339818593 RMSE: 0.5342835052701022 NRMSE: 0.17466524086112722 MAPE: 862.4130693005924 Protein: CCNE1 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.9999999999999994 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 2.9883533148025575e-15 NRMSE: 7.21179939378468e-16 MAPE: 4.672018266406692e-13 Pearson Correlation: 0.33616863070328623 Spearman Correlation: 0.30493397673287703 Coefficient of Determination: -1.6773929890955381 RMSE: 0.5970578251493228 NRMSE: 0.2600765889050498 MAPE: 113.13242091800345 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.026235343205149385, tolerance: 0.014683406463848499 positive)
Pearson Correlation: 0.9999998825911357 Spearman Correlation: 0.9999941626119457 Coefficient of Determination: 0.9999997543701986 RMSE: 0.00025891833239932206 NRMSE: 6.248481608208173e-05 MAPE: 0.04071588320437232 Pearson Correlation: 0.40039701043992554 Spearman Correlation: 0.31933315876756574 Coefficient of Determination: -1.5467748244733652 RMSE: 0.5823118228322922 NRMSE: 0.25365327474508526 MAPE: 147.5562842901271 Predictor: RandomForests Pearson Correlation: 0.8656291187641358 Spearman Correlation: 0.7277939601057463 Coefficient of Determination: 0.7449826156980306 RMSE: 0.26381966597167583 NRMSE: 0.06366765595281411 MAPE: 55.107220538524096 Pearson Correlation: 0.7834604476468632 Spearman Correlation: 0.6683296676954233 Coefficient of Determination: 0.5631707558954504 RMSE: 0.2411660589117478 NRMSE: 0.10505120830759586 MAPE: 81.58382824864694 Protein: CCND1 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.619021499786503e-15 NRMSE: 9.733089056200498e-16 MAPE: 5.098117295746339e-12 Pearson Correlation: 0.1923560408960921 Spearman Correlation: 0.24366139228668687 Coefficient of Determination: -3.9596964996789445 RMSE: 0.4670979558221874 NRMSE: 0.4426084313173958 MAPE: 687.0714414877676 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.019215223777554302, tolerance: 0.0032202923923696524 positive)
Pearson Correlation: 0.9999995054650375 Spearman Correlation: 0.9999953570609866 Coefficient of Determination: 0.9999988573782725 RMSE: 0.000261521714193456 NRMSE: 0.000157219291696298 MAPE: 0.9392152004492585 Pearson Correlation: 0.20052161072184843 Spearman Correlation: 0.26172146784872635 Coefficient of Determination: -5.780627910496908 RMSE: 0.5461543190617173 NRMSE: 0.517519940740543 MAPE: 1295.6588974707288 Predictor: RandomForests Pearson Correlation: 0.5821760361052767 Spearman Correlation: 0.5571996226465693 Coefficient of Determination: 0.28622123630624774 RMSE: 0.20669897668359347 NRMSE: 0.12426144730951502 MAPE: 478.07240291242044 Pearson Correlation: 0.37556601196435074 Spearman Correlation: 0.36745345951944547 Coefficient of Determination: 0.13028186218702176 RMSE: 0.19560037345215894 NRMSE: 0.18534522230217934 MAPE: 320.6681762122486 Protein: ERBB2 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 5.027248632455143e-15 NRMSE: 8.56474544262082e-16 MAPE: 8.803613715945099e-12 Pearson Correlation: 0.6728463191951967 Spearman Correlation: 0.4127737412860492 Coefficient of Determination: -0.2258414668726907 RMSE: 1.1808500907078603 NRMSE: 0.2130114168965763 MAPE: 557.1142248371049 Predictor: ElasticNet Pearson Correlation: 0.9999999575702009 Spearman Correlation: 0.9999980349386376 Coefficient of Determination: 0.999999910685402 RMSE: 0.0002932474627087058 NRMSE: 4.99595316129795e-05 MAPE: 0.3501380073114074 Pearson Correlation: 0.6396897544783858 Spearman Correlation: 0.4434549601057826 Coefficient of Determination: -0.6036782440155726 RMSE: 1.3506295021564683 NRMSE: 0.24363761854326943 MAPE: 513.5304904355496 Predictor: RandomForests Pearson Correlation: 0.8483413656822675 Spearman Correlation: 0.6935444446745036 Coefficient of Determination: 0.7126999423506408 RMSE: 0.52594568398278 NRMSE: 0.08960350341291377 MAPE: 475.7731472916337 Pearson Correlation: 0.8578783339992487 Spearman Correlation: 0.7142996087152576 Coefficient of Determination: 0.731714042396095 RMSE: 0.5524291463764632 NRMSE: 0.09965169679927544 MAPE: 182.45333137591433 Protein: ERBB3 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999884408153 Coefficient of Determination: 1.0 RMSE: 3.347155832721957e-15 NRMSE: 1.2136742604698397e-15 MAPE: 2.6549518812986617e-12 Pearson Correlation: 0.014926652937612108 Spearman Correlation: 0.04293070985922518 Coefficient of Determination: -4.175588710142405 RMSE: 1.1254880423768712 NRMSE: 0.31291806280027 MAPE: 491.18476749830035 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.03872265161750236, tolerance: 0.010943186691674512 positive)
Pearson Correlation: 0.9999998130875588 Spearman Correlation: 0.9999967248974826 Coefficient of Determination: 0.9999995796378877 RMSE: 0.00029241022113762134 NRMSE: 0.00010602755791158442 MAPE: 0.18565481968188274 Pearson Correlation: -0.05586872990345319 Spearman Correlation: -0.05407299342884574 Coefficient of Determination: -5.205300247454784 RMSE: 1.232373658322936 NRMSE: 0.34263533977144256 MAPE: 556.4261915255703 Predictor: RandomForests Pearson Correlation: 0.5872740910019143 Spearman Correlation: 0.6332586552147532 Coefficient of Determination: 0.3196031830088445 RMSE: 0.37201624341848183 NRMSE: 0.13489259588685537 MAPE: 226.29405335161604 Pearson Correlation: 0.36454608313912584 Spearman Correlation: 0.3499819199740645 Coefficient of Determination: 0.10724807893394628 RMSE: 0.46744057069377104 NRMSE: 0.1299619297125936 MAPE: 157.16147797725486 Fold: 4 Protein: RB1 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.1040738361073864e-15 NRMSE: 7.694828247905889e-16 MAPE: 1.2110508873617204e-11 Pearson Correlation: 0.02315338215627446 Spearman Correlation: 0.013643561640419457 Coefficient of Determination: -10.370645006806761 RMSE: 0.5559896625860267 NRMSE: 0.5327000178074836 MAPE: 635.8756158699352 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.02549064213877948, tolerance: 0.0034032643600116126 positive)
Pearson Correlation: 0.9999994498867332 Spearman Correlation: 0.999994220407978 Coefficient of Determination: 0.9999986193860321 RMSE: 0.000295524054462463 NRMSE: 0.00010807638036222316 MAPE: 0.5893898060866524 Pearson Correlation: 0.05648724341179823 Spearman Correlation: 0.02091547276150576 Coefficient of Determination: -16.172585435587123 RMSE: 0.6832694595260393 NRMSE: 0.6546482385371932 MAPE: 691.6515306650382 Predictor: RandomForests Pearson Correlation: 0.6381084532400236 Spearman Correlation: 0.4977831989494705 Coefficient of Determination: 0.19275211346466326 RMSE: 0.2259748794284917 NRMSE: 0.08264148604026174 MAPE: 147.84699251230302 Pearson Correlation: 0.026428135405332818 Spearman Correlation: 0.07855708924051423 Coefficient of Determination: -0.08309411179601534 RMSE: 0.17159604102172343 NRMSE: 0.16440811809845882 MAPE: 112.90839521007719 Protein: CDH1 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 6.749864822876146e-15 NRMSE: 1.074785010489498e-15 MAPE: 9.945199327112206e-12 Pearson Correlation: 0.14096994233410357 Spearman Correlation: 0.1532063990822828 Coefficient of Determination: -2.431109850894984 RMSE: 2.1606397788959115 NRMSE: 0.39197412628277484 MAPE: 904.1353400599393 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.08724336592350969, tolerance: 0.06736762282826622 positive)
Pearson Correlation: 0.9999999729890854 Spearman Correlation: 0.9999988440815955 Coefficient of Determination: 0.9999999393210646 RMSE: 0.00027564711418855164 NRMSE: 4.3891454760764247e-05 MAPE: 0.16014632546834773 Pearson Correlation: 0.11761555716074915 Spearman Correlation: 0.09934537837130139 Coefficient of Determination: -2.511157445703587 RMSE: 2.185698268924754 NRMSE: 0.3965201315127815 MAPE: 1346.0361698627955 Predictor: RandomForests Pearson Correlation: 0.7567585983437437 Spearman Correlation: 0.7229515213085015 Coefficient of Determination: 0.5686294417624649 RMSE: 0.7349532654206713 NRMSE: 0.11702704777247082 MAPE: 286.4309298935643 Pearson Correlation: 0.7853371769353192 Spearman Correlation: 0.5660444643948179 Coefficient of Determination: 0.5537497242061515 RMSE: 0.7792096186835633 NRMSE: 0.14136091191966244 MAPE: 151.00678832933545 Protein: CDH2 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999036734615 Coefficient of Determination: 1.0 RMSE: 3.5310930047746885e-15 NRMSE: 1.279474238993655e-15 MAPE: 2.5080765822050708e-11 Pearson Correlation: 0.024357590478142614 Spearman Correlation: 0.07537500467586877 Coefficient of Determination: -8.711167119077304 RMSE: 1.038551572841178 NRMSE: 0.5357556295866751 MAPE: 1037.0031222255793 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.03470052152735058, tolerance: 0.007742718020581794 positive)
Pearson Correlation: 0.999999776212899 Spearman Correlation: 0.9999972835914928 Coefficient of Determination: 0.9999994673905779 RMSE: 0.00027685986720232933 NRMSE: 0.00010031881556718941 MAPE: 1.6586917372237546 Pearson Correlation: 0.06472772090127284 Spearman Correlation: 0.061300016209678426 Coefficient of Determination: -7.553879246717678 RMSE: 0.9747066102780926 NRMSE: 0.5028200498731441 MAPE: 1381.7185189162485 Predictor: RandomForests Pearson Correlation: 0.5451752644545071 Spearman Correlation: 0.5014919343955386 Coefficient of Determination: 0.16832619377823244 RMSE: 0.34596494457542487 NRMSE: 0.12535870156367304 MAPE: 544.9057521868507 Pearson Correlation: 0.1908314617359735 Spearman Correlation: 0.16231873215376752 Coefficient of Determination: -0.010711399253303 RMSE: 0.33504715594169937 NRMSE: 0.172840140698743 MAPE: 135.67176753054105 Protein: CDH3 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 1.3950900359487419e-15 NRMSE: 9.94262893188664e-16 MAPE: 6.363720071780827e-12 Pearson Correlation: 0.21000399419072213 Spearman Correlation: 0.28249479419942897 Coefficient of Determination: -2.593756437420863 RMSE: 0.39392351738146636 NRMSE: 0.35060925056648296 MAPE: 1038.2198467276912 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.0163147485361759, tolerance: 0.002281064009154941 positive)
Pearson Correlation: 0.9999991682476701 Spearman Correlation: 0.9999937580403768 Coefficient of Determination: 0.9999980768333405 RMSE: 0.00028555256062374427 NRMSE: 0.00020350967161063347 MAPE: 0.8210145486194778 Pearson Correlation: 0.028679228760434442 Spearman Correlation: 0.09796880260352374 Coefficient of Determination: -3.2964663404596335 RMSE: 0.4307182721601961 NRMSE: 0.38335820011766025 MAPE: 3092.983385745487 Predictor: RandomForests Pearson Correlation: 0.62731698932498 Spearman Correlation: 0.5992867674925528 Coefficient of Determination: 0.322668280088637 RMSE: 0.16946433256057516 NRMSE: 0.12077507059920975 MAPE: 364.0170213400704 Pearson Correlation: 0.44909618752382024 Spearman Correlation: 0.3746954450803626 Coefficient of Determination: 0.13870741957682275 RMSE: 0.1928470243953584 NRMSE: 0.17164233084301259 MAPE: 482.39165643118895 Protein: PTEN x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.128996116576931e-15 NRMSE: 7.987070791892856e-16 MAPE: 4.151984520878055e-12 Pearson Correlation: 0.13764627315173417 Spearman Correlation: 0.10602875347572913 Coefficient of Determination: -3.8853036646354697 RMSE: 1.6479157551968757 NRMSE: 0.25766800956873986 MAPE: 3608.839050110405 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.05383003888133962, tolerance: 0.016979184196949017 positive)
Pearson Correlation: 0.9999998899948865 Spearman Correlation: 0.999997996408099 Coefficient of Determination: 0.9999997397555871 RMSE: 0.00028658798526027456 NRMSE: 5.543716830321003e-05 MAPE: 0.37310363606764096 Pearson Correlation: 0.04134692570608481 Spearman Correlation: 0.1030012843052906 Coefficient of Determination: -2.959792780472187 RMSE: 1.4836294777620052 NRMSE: 0.23198021699038465 MAPE: 6001.335343549942 Predictor: RandomForests Pearson Correlation: 0.621251055428678 Spearman Correlation: 0.558901134603313 Coefficient of Determination: 0.29230039101521244 RMSE: 0.47259785904784607 NRMSE: 0.09141865116214912 MAPE: 162.42673168042353 Pearson Correlation: 0.41153448452375 Spearman Correlation: 0.45323507774411154 Coefficient of Determination: 0.13680420118237402 RMSE: 0.6926979188422124 NRMSE: 0.10831020543229027 MAPE: 121.6835938740203 Protein: BRCA2 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999229387699 Coefficient of Determination: 1.0 RMSE: 1.3751532648489867e-15 NRMSE: 8.859096568523026e-16 MAPE: 3.3562671565242822e-12 Pearson Correlation: 0.11967190329348594 Spearman Correlation: 0.14752054265015777 Coefficient of Determination: -3.152377689026965 RMSE: 0.42406840744125596 NRMSE: 0.41199289566919195 MAPE: 1428.945099784379 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.019746594890222062, tolerance: 0.001979097117455079 positive)
Pearson Correlation: 0.9999986462625281 Spearman Correlation: 0.9999936039176726 Coefficient of Determination: 0.9999968001332783 RMSE: 0.00034309023722193176 NRMSE: 0.00022102769349133952 MAPE: 0.6043092938378126 Pearson Correlation: 0.05358541346273686 Spearman Correlation: 0.051673961021957884 Coefficient of Determination: -18.42043764330509 RMSE: 0.9171006497356182 NRMSE: 0.890985854344773 MAPE: 914.5769193194093 Predictor: RandomForests Pearson Correlation: 0.5887549936170411 Spearman Correlation: 0.49075328780787014 Coefficient of Determination: 0.18936708022714555 RMSE: 0.172684967629759 NRMSE: 0.11124816726027315 MAPE: 140.78103210194269 Pearson Correlation: 0.29605011692346495 Spearman Correlation: 0.34412149777428647 Coefficient of Determination: 0.059375168809654655 RMSE: 0.20183464470872797 NRMSE: 0.19608732520691335 MAPE: 153.619586826039 Protein: CDKN2A x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 4.61526141627964e-15 NRMSE: 1.0433506084050275e-15 MAPE: 5.580666921462731e-12 Pearson Correlation: 0.041829186844449105 Spearman Correlation: 0.05579371313856781 Coefficient of Determination: -3.4318046682013845 RMSE: 1.327688463119642 NRMSE: 0.400026653546141 MAPE: 783.3512426115109 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.05510720425518328, tolerance: 0.024436786734185888 positive)
Pearson Correlation: 0.9999999267974853 Spearman Correlation: 0.999998593632581 Coefficient of Determination: 0.9999998308960645 RMSE: 0.00027714546021523166 NRMSE: 6.265298072007044e-05 MAPE: 0.34087288444693997 Pearson Correlation: 0.19767296249526015 Spearman Correlation: 0.1748525542712503 Coefficient of Determination: -3.0722688203214457 RMSE: 1.272694290311235 NRMSE: 0.3834571528506282 MAPE: 659.9716925904994 Predictor: RandomForests Pearson Correlation: 0.6810237815783834 Spearman Correlation: 0.6098774881184151 Coefficient of Determination: 0.4543707181693276 RMSE: 0.4978284889267059 NRMSE: 0.11254176306696187 MAPE: 197.24013930214187 Pearson Correlation: 0.5875080901226605 Spearman Correlation: 0.48069417671230547 Coefficient of Determination: 0.31954361277759347 RMSE: 0.5202427344376921 NRMSE: 0.15674683170765052 MAPE: 131.14284114518037 Protein: TP53 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 2.803160180098069e-15 NRMSE: 6.736746407349362e-16 MAPE: 1.0007903864716073e-11 Pearson Correlation: 0.16706574140275196 Spearman Correlation: 0.15956558061821222 Coefficient of Determination: -4.752348467093666 RMSE: 1.035661077713096 NRMSE: 0.32865609219125913 MAPE: 957.2970885148641 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.033356787039538004, tolerance: 0.01090027058925727 positive)
Pearson Correlation: 0.9999998325789636 Spearman Correlation: 0.9999976688978398 Coefficient of Determination: 0.9999996179042046 RMSE: 0.00027823619853606976 NRMSE: 6.686762762222297e-05 MAPE: 0.8807345005915899 Pearson Correlation: 0.12167380552350404 Spearman Correlation: 0.19858851107869177 Coefficient of Determination: -10.462574916081978 RMSE: 1.4619622375202503 NRMSE: 0.46393825765430635 MAPE: 1304.9993736573879 Predictor: RandomForests Pearson Correlation: 0.6522736857068524 Spearman Correlation: 0.5955850254943221 Coefficient of Determination: 0.37080883820779376 RMSE: 0.35704159046480755 NRMSE: 0.08580667879471462 MAPE: 640.5525464204939 Pearson Correlation: 0.6077390431140113 Spearman Correlation: 0.46335855399476744 Coefficient of Determination: 0.3053556548286668 RMSE: 0.35989541487510385 NRMSE: 0.11420900446658537 MAPE: 232.63716914762745 Protein: CTNNB1 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 4.730966046614561e-15 NRMSE: 1.1426350223685058e-15 MAPE: 2.823102264647093e-12 Pearson Correlation: 0.17642760084896544 Spearman Correlation: 0.2181099514956546 Coefficient of Determination: -1.5291440580966045 RMSE: 1.2761657159613207 NRMSE: 0.26830496088666234 MAPE: 3045.6452786248883 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.055200796172069966, tolerance: 0.02722969373777278 positive)
Pearson Correlation: 0.9999999429789977 Spearman Correlation: 0.9999989404080698 Coefficient of Determination: 0.9999998689374376 RMSE: 0.0002575547523186512 NRMSE: 6.220528265835456e-05 MAPE: 0.17402177754144255 Pearson Correlation: 0.11356153463869649 Spearman Correlation: 0.15786979887529773 Coefficient of Determination: -2.1129865153229996 RMSE: 1.4158228245296514 NRMSE: 0.2976668960830988 MAPE: 3534.3630250770616 Predictor: RandomForests Pearson Correlation: 0.6505995835887627 Spearman Correlation: 0.6159137652421585 Coefficient of Determination: 0.40863976823311166 RMSE: 0.5470868779629359 NRMSE: 0.13213382232705437 MAPE: 492.56374599439033 Pearson Correlation: 0.6728019798505843 Spearman Correlation: 0.43273606902829215 Coefficient of Determination: 0.29873360683726247 RMSE: 0.6719884413248832 NRMSE: 0.14128089339098546 MAPE: 486.6055503360776 Protein: CCNE1 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.6556182352226847e-15 NRMSE: 6.408809120406122e-16 MAPE: 4.698559011882622e-13 Pearson Correlation: 0.40250068487494256 Spearman Correlation: 0.2869387398845372 Coefficient of Determination: -1.100900461387032 RMSE: 0.6552842869274246 NRMSE: 0.26739748915670636 MAPE: 155.66521748420791 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.026317417766796206, tolerance: 0.013709715616187399 positive)
Pearson Correlation: 0.9999998452903016 Spearman Correlation: 0.999994528652886 Coefficient of Determination: 0.999999673335434 RMSE: 0.00028851878811210783 NRMSE: 6.962830033837099e-05 MAPE: 0.04889964069560808 Pearson Correlation: 0.41356000730289105 Spearman Correlation: 0.3482013491440043 Coefficient of Determination: -1.210452983395399 RMSE: 0.6721522501132036 NRMSE: 0.2742806864087177 MAPE: 167.36119478987925 Predictor: RandomForests Pearson Correlation: 0.8631478548442655 Spearman Correlation: 0.7173350755697575 Coefficient of Determination: 0.7401897760829517 RMSE: 0.25730676454296136 NRMSE: 0.06209589606944551 MAPE: 55.287152574985775 Pearson Correlation: 0.8347812979886176 Spearman Correlation: 0.7078638254375804 Coefficient of Determination: 0.6880816864518697 RMSE: 0.2524919014749136 NRMSE: 0.10303268647470565 MAPE: 71.1910611187347 Protein: CCND1 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.7245370237853453e-15 NRMSE: 1.1017857066644595e-15 MAPE: 5.164063488655165e-12 Pearson Correlation: 0.16892710333534433 Spearman Correlation: 0.23172109377922417 Coefficient of Determination: -7.479034385873289 RMSE: 0.66682548770108 NRMSE: 0.42055088780340566 MAPE: 785.3506374357183 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.01921457267342994, tolerance: 0.003106817057166876 positive)
Pearson Correlation: 0.9999994891514263 Spearman Correlation: 0.9999946057141129 Coefficient of Determination: 0.9999988184311839 RMSE: 0.0002612138576126569 NRMSE: 0.00016688635310860894 MAPE: 0.872713675737503 Pearson Correlation: 0.24049279235150745 Spearman Correlation: 0.25854437087744236 Coefficient of Determination: -2.7678991529192714 RMSE: 0.44451725954486554 NRMSE: 0.2803464048592744 MAPE: 564.6753158145427 Predictor: RandomForests Pearson Correlation: 0.584802345698789 Spearman Correlation: 0.5464945252429267 Coefficient of Determination: 0.2721520258229466 RMSE: 0.20501566270737998 NRMSE: 0.1309820106485861 MAPE: 470.2302236724467 Pearson Correlation: 0.4858261863321796 Spearman Correlation: 0.4324268382398784 Coefficient of Determination: 0.19618189738163583 RMSE: 0.20531367860948616 NRMSE: 0.1294864269736921 MAPE: 507.3079614215433 Protein: ERBB2 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 4.4939720347610504e-15 NRMSE: 7.656220990444231e-16 MAPE: 5.311462897531192e-12 Pearson Correlation: 0.45126061028457987 Spearman Correlation: 0.4279909076062974 Coefficient of Determination: -1.4684187061239338 RMSE: 1.6287269666285928 NRMSE: 0.2932846484367402 MAPE: 583.7579054016985 Predictor: ElasticNet Pearson Correlation: 0.9999999647885494 Spearman Correlation: 0.9999986514284769 Coefficient of Determination: 0.9999999265194391 RMSE: 0.0002658751486015084 NRMSE: 4.5296207404383254e-05 MAPE: 0.5411349508893027 Pearson Correlation: 0.4987805155696282 Spearman Correlation: 0.3557978974776734 Coefficient of Determination: -0.9044359838473583 RMSE: 1.4306126533048282 NRMSE: 0.2576102303642504 MAPE: 538.2485380787632 Predictor: RandomForests Pearson Correlation: 0.8613373331950391 Spearman Correlation: 0.6921141280203085 Coefficient of Determination: 0.7349556371565737 RMSE: 0.5049528179745826 NRMSE: 0.0860270231825447 MAPE: 368.38077043596076 Pearson Correlation: 0.7853596400082334 Spearman Correlation: 0.673585324434192 Coefficient of Determination: 0.5751027629726451 RMSE: 0.6757418649212897 NRMSE: 0.12168074781598476 MAPE: 195.697126766641 Protein: ERBB3 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999036734615 Coefficient of Determination: 1.0 RMSE: 3.3177556393455157e-15 NRMSE: 9.071871134246554e-16 MAPE: 2.2887145317954055e-12 Pearson Correlation: -0.01800914119486008 Spearman Correlation: 0.018262073093180713 Coefficient of Determination: -11.929024448240616 RMSE: 1.3828354275757149 NRMSE: 0.6806397828267952 MAPE: 821.6977049155947 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.043661833270578036, tolerance: 0.012277828558956158 positive)
Pearson Correlation: 0.9999998263013957 Spearman Correlation: 0.9999982083263053 Coefficient of Determination: 0.9999995952449872 RMSE: 0.0003039245362227639 NRMSE: 8.310329412001124e-05 MAPE: 0.19607179468562178 Pearson Correlation: -0.022271691707747912 Spearman Correlation: 0.07923540193768003 Coefficient of Determination: -17.4432965093622 RMSE: 1.6516076784454712 NRMSE: 0.8129310756399766 MAPE: 825.7819421211204 Predictor: RandomForests Pearson Correlation: 0.5941631195613496 Spearman Correlation: 0.6058548991853987 Coefficient of Determination: 0.3204203752433872 RMSE: 0.3938127922415833 NRMSE: 0.1076817972928897 MAPE: 228.15022507560036 Pearson Correlation: 0.42072707195020786 Spearman Correlation: 0.37903963889824066 Coefficient of Determination: 0.1668210734137191 RMSE: 0.35104012256933687 NRMSE: 0.17278402622932704 MAPE: 226.684848181106 Fold: 5 Protein: RB1 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'RB1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.8057232512749577e-15 NRMSE: 8.920543867420983e-16 MAPE: 5.785597651922806e-12 Pearson Correlation: -0.05495547099277147 Spearman Correlation: -0.036785994837840875 Coefficient of Determination: -4.687607936134107 RMSE: 0.5732501955900445 NRMSE: 0.2890356551590487 MAPE: 3260.331144024201 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.020960348352370355, tolerance: 0.002943482941498817 positive)
Pearson Correlation: 0.9999994718804529 Spearman Correlation: 0.9999949910202476 Coefficient of Determination: 0.9999987370063308 RMSE: 0.00026286950698611216 NRMSE: 0.0001298614816429517 MAPE: 0.8040667587041744 Pearson Correlation: -0.08088554696941813 Spearman Correlation: -0.09074676741605259 Coefficient of Determination: -8.335293069091575 RMSE: 0.734418087220206 NRMSE: 0.3702973232863108 MAPE: 2132.8094885386795 Predictor: RandomForests Pearson Correlation: 0.6347448598926371 Spearman Correlation: 0.49853793660627516 Coefficient of Determination: 0.21165180987334198 RMSE: 0.20768190618376103 NRMSE: 0.10259797858136724 MAPE: 121.86713214856091 Pearson Correlation: 0.06055176371993906 Spearman Correlation: 0.1274604421501515 Coefficient of Determination: -0.12157139065047962 RMSE: 0.25456157371494986 NRMSE: 0.1283512361671086 MAPE: 219.10990833419564 Protein: CDH1 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 7.20969169163741e-15 NRMSE: 1.14800351766463e-15 MAPE: 2.8493018279998733e-12 Pearson Correlation: 0.23603482638339626 Spearman Correlation: 0.2715270763974613 Coefficient of Determination: -1.8978834309350385 RMSE: 1.9776630889690616 NRMSE: 0.38891331320309563 MAPE: 3883.985032603846 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.08786499179382222, tolerance: 0.0682205483025332 positive)
Pearson Correlation: 0.9999999759766675 Spearman Correlation: 0.9999989211428224 Coefficient of Determination: 0.9999999464209799 RMSE: 0.0002606536724904886 NRMSE: 4.150404007682694e-05 MAPE: 0.08124967313484582 Pearson Correlation: 0.1234383886299849 Spearman Correlation: 0.10229803364131722 Coefficient of Determination: -3.3803311546324695 RMSE: 2.431449894451952 NRMSE: 0.47815183466440225 MAPE: 3611.621098959045 Predictor: RandomForests Pearson Correlation: 0.7917862427049216 Spearman Correlation: 0.7085738408101335 Coefficient of Determination: 0.6223784366554885 RMSE: 0.6919820960334875 NRMSE: 0.11018472278486154 MAPE: 149.74354815061582 Pearson Correlation: 0.6475558195987032 Spearman Correlation: 0.5885891203001126 Coefficient of Determination: 0.4120557055088666 RMSE: 0.8907994541004617 NRMSE: 0.17517835521434422 MAPE: 571.186344639609 Protein: CDH2 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'CDH2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 2.34712041919309e-15 NRMSE: 1.152753017628353e-15 MAPE: 5.065369967585486e-12 Pearson Correlation: 0.1697234701614749 Spearman Correlation: 0.10173705624399265 Coefficient of Determination: -3.6842850630649497 RMSE: 0.9027200207701607 NRMSE: 0.33757269441510784 MAPE: 36782.84310613462 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.03341411861609193, tolerance: 0.0069390679727214565 positive)
Pearson Correlation: 0.9999997858552477 Spearman Correlation: 0.9999977266937179 Coefficient of Determination: 0.9999994845217786 RMSE: 0.00025784849074954596 NRMSE: 0.00012663842186019642 MAPE: 0.5327009544802453 Pearson Correlation: -0.06804910127463672 Spearman Correlation: -0.06499839773368528 Coefficient of Determination: -6.836070176043944 RMSE: 1.167563674510742 NRMSE: 0.4366111379356962 MAPE: 23632.439396660327 Predictor: RandomForests Pearson Correlation: 0.633246917835592 Spearman Correlation: 0.5641288143189632 Coefficient of Determination: 0.18426820195479743 RMSE: 0.32436435964730204 NRMSE: 0.15930669399700506 MAPE: 317.20381480151656 Pearson Correlation: 0.09391863420750683 Spearman Correlation: 0.17878300076448864 Coefficient of Determination: -0.0060794161453974205 RMSE: 0.4183574894595807 NRMSE: 0.1564450346688034 MAPE: 5190.289177350378 Protein: CDH3 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.40766851508334e-15 NRMSE: 9.875880585138773e-16 MAPE: 5.217001876175382e-12 Pearson Correlation: 0.27755879689907187 Spearman Correlation: 0.2646940734921882 Coefficient of Determination: -3.062891614912142 RMSE: 0.45028296002943186 NRMSE: 0.4062495692215122 MAPE: 847.5652018064236 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.01609763839321133, tolerance: 0.0022338465809413456 positive)
Pearson Correlation: 0.9999992712550254 Spearman Correlation: 0.9999941626119457 Coefficient of Determination: 0.9999982778908298 RMSE: 0.0002674027524184556 NRMSE: 0.0001876036597199694 MAPE: 1.1820908544292998 Pearson Correlation: 0.15096656398246144 Spearman Correlation: 0.1239940647638998 Coefficient of Determination: -3.7276109465993628 RMSE: 0.4857231006417562 NRMSE: 0.43822400115641263 MAPE: 686.6704087315097 Predictor: RandomForests Pearson Correlation: 0.6387308876130702 Spearman Correlation: 0.6259421578034021 Coefficient of Determination: 0.3299395197499837 RMSE: 0.16679865167713087 NRMSE: 0.11702212190403187 MAPE: 389.16482280895497 Pearson Correlation: 0.5082150087146422 Spearman Correlation: 0.5169116821905511 Coefficient of Determination: 0.21442666688841183 RMSE: 0.19799820824554837 NRMSE: 0.17863586665844006 MAPE: 143.598501598241 Protein: PTEN x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'PTEN', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.5009439633988196e-15 NRMSE: 5.474073901022312e-16 MAPE: 4.469842940449717e-12 Pearson Correlation: 0.055875289277087986 Spearman Correlation: 0.09979924936719911 Coefficient of Determination: -2.7549111081505364 RMSE: 1.398489679451677 NRMSE: 0.27052183523902756 MAPE: 2215.7865273010048 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.04799821381647209, tolerance: 0.017420030134596684 positive)
Pearson Correlation: 0.9999999190553012 Spearman Correlation: 0.9999989982040495 Coefficient of Determination: 0.9999998139849487 RMSE: 0.0002454185332861698 NRMSE: 3.837362728264714e-05 MAPE: 0.43131139471674523 Pearson Correlation: 0.00018392429951384886 Spearman Correlation: 0.10534046559184032 Coefficient of Determination: -3.2024461877361734 RMSE: 1.4794848289038667 NRMSE: 0.2861894206329052 MAPE: 2284.22830371923 Predictor: RandomForests Pearson Correlation: 0.5806105015877211 Spearman Correlation: 0.5448175956132288 Coefficient of Determination: 0.2890912378140721 RMSE: 0.47977790827441474 NRMSE: 0.0750180452309303 MAPE: 248.7893672794615 Pearson Correlation: 0.40814574843638535 Spearman Correlation: 0.4829997456336062 Coefficient of Determination: 0.14845475303508426 RMSE: 0.6659832404365721 NRMSE: 0.12882684161957833 MAPE: 547.4011019921459 Protein: BRCA2 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'BRCA2', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999884408153 Coefficient of Determination: 1.0 RMSE: 1.256262313334376e-15 NRMSE: 8.093170000543573e-16 MAPE: 4.383689057505146e-12 Pearson Correlation: -0.04993756138655492 Spearman Correlation: -0.06185862666616792 Coefficient of Determination: -8.566244288265738 RMSE: 0.513697940554926 NRMSE: 0.6718079389981377 MAPE: 751.4776026765995 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.01876423704209527, tolerance: 0.0021620874757223526 positive)
Pearson Correlation: 0.9999989458916678 Spearman Correlation: 0.9999945671828782 Coefficient of Determination: 0.9999975342189816 RMSE: 0.0003147913174824157 NRMSE: 0.00020279679013201208 MAPE: 1.1351162444117995 Pearson Correlation: 0.0274298607039922 Spearman Correlation: 0.036711180937418174 Coefficient of Determination: -6.3691661165374 RMSE: 0.450864731545792 NRMSE: 0.5896354299951506 MAPE: 930.6500006672944 Predictor: RandomForests Pearson Correlation: 0.6020972129647326 Spearman Correlation: 0.5345531407732345 Coefficient of Determination: 0.2159991204473013 RMSE: 0.17750221123478405 NRMSE: 0.11435156143326401 MAPE: 143.1639389559683 Pearson Correlation: 0.1685533529661238 Spearman Correlation: 0.12578959837404458 Coefficient of Determination: -0.050292330282889264 RMSE: 0.17021278911363544 NRMSE: 0.2226022220802137 MAPE: 176.48324516968427 Protein: CDKN2A x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'CDKN2A', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.506112913734662e-15 NRMSE: 1.1474403284191037e-15 MAPE: 4.204662447482159e-12 Pearson Correlation: 0.2065850025708906 Spearman Correlation: 0.2127682390054739 Coefficient of Determination: -3.33689218100628 RMSE: 1.261902291688511 NRMSE: 0.31753158996716513 MAPE: 863.3269928851294 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.052247021304257985, tolerance: 0.024854257731250624 positive)
Pearson Correlation: 0.9999999245685737 Spearman Correlation: 0.9999987670203686 Coefficient of Determination: 0.9999998293238724 RMSE: 0.000280799061030697 NRMSE: 7.15029057143177e-05 MAPE: 0.2079974282388424 Pearson Correlation: 0.16564107486833438 Spearman Correlation: 0.10622825721018966 Coefficient of Determination: -4.751226088991915 RMSE: 1.453170713531961 NRMSE: 0.36566032901335166 MAPE: 877.1741725989415 Predictor: RandomForests Pearson Correlation: 0.7071893297285682 Spearman Correlation: 0.6403521242481157 Coefficient of Determination: 0.4955133943001815 RMSE: 0.48276311507748193 NRMSE: 0.12293119988731684 MAPE: 203.5984685277793 Pearson Correlation: 0.3671079072936035 Spearman Correlation: 0.3298545627434006 Coefficient of Determination: -0.06878750159246261 RMSE: 0.6264437773915696 NRMSE: 0.15763160901627277 MAPE: 500.6756726697584 Protein: TP53 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'TP53', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.640568665508078e-15 NRMSE: 6.715757434085502e-16 MAPE: 9.029646923270314e-12 Pearson Correlation: 0.19221683845258838 Spearman Correlation: 0.08680158106709561 Coefficient of Determination: -1.3464207060648414 RMSE: 0.8090153538864676 NRMSE: 0.21669086752014668 MAPE: 453.8767312415372 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.03225737268038473, tolerance: 0.009662504276089433 positive)
Pearson Correlation: 0.99999984331704 Spearman Correlation: 0.9999985358366877 Coefficient of Determination: 0.99999964118403 RMSE: 0.00025385726331161206 NRMSE: 6.456350957847658e-05 MAPE: 0.7948096803296328 Pearson Correlation: 0.28240445775150796 Spearman Correlation: 0.22023466626765922 Coefficient of Determination: -0.9318291843639817 RMSE: 0.734071197400797 NRMSE: 0.19661743602539092 MAPE: 366.3352644012029 Predictor: RandomForests Pearson Correlation: 0.6494504641594678 Spearman Correlation: 0.5976737280102739 Coefficient of Determination: 0.37248863991397363 RMSE: 0.3357101777164568 NRMSE: 0.08538115865521931 MAPE: 759.2323708412493 Pearson Correlation: 0.5046538026736783 Spearman Correlation: 0.40734972674220465 Coefficient of Determination: 0.22678733554446173 RMSE: 0.46441186000847356 NRMSE: 0.12439048078437755 MAPE: 144.26997802582628 Protein: CTNNB1 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 4.921329846364174e-15 NRMSE: 9.680035102997982e-16 MAPE: 8.137442848247414e-12 Pearson Correlation: 0.15788033726252468 Spearman Correlation: 0.15720146136485494 Coefficient of Determination: -4.218992371294917 RMSE: 1.5481168179652456 NRMSE: 0.4958114834998977 MAPE: 658.4581086139513 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.05934029752183957, tolerance: 0.030747074518831245 positive)
Pearson Correlation: 0.9999999471088301 Spearman Correlation: 0.9999982468569871 Coefficient of Determination: 0.9999998793131076 RMSE: 0.0002626278719629574 NRMSE: 5.165772461899241e-05 MAPE: 0.126948357321456 Pearson Correlation: 0.14641870948008853 Spearman Correlation: 0.2004039950622826 Coefficient of Determination: -5.197406143190277 RMSE: 1.6870011426771832 NRMSE: 0.5402916172153969 MAPE: 1020.7974473840924 Predictor: RandomForests Pearson Correlation: 0.6638796042083426 Spearman Correlation: 0.6608173589074685 Coefficient of Determination: 0.4261581231695958 RMSE: 0.5726732290787995 NRMSE: 0.11264225591636497 MAPE: 453.57759757691696 Pearson Correlation: 0.6584271613042791 Spearman Correlation: 0.5851220090026061 Coefficient of Determination: 0.4290596463126808 RMSE: 0.5120422148635471 NRMSE: 0.16399047359988567 MAPE: 183.8320757255191 Protein: CCNE1 x_train_column_count: 1002 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'CCNE1', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 2.4122559954141703e-15 NRMSE: 8.592185201831417e-16 MAPE: 4.417207199036688e-13 Pearson Correlation: 0.4037417541468932 Spearman Correlation: 0.30114839337148847 Coefficient of Determination: -0.08278247911461101 RMSE: 0.6743882880383372 NRMSE: 0.162750268609778 MAPE: 146.2691355373654 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.02278867334704073, tolerance: 0.010836139816194496 positive)
Pearson Correlation: 0.9999998064789473 Spearman Correlation: 0.999993603917917 Coefficient of Determination: 0.9999995917241067 RMSE: 0.00028676294446760935 NRMSE: 0.00010214174335444679 MAPE: 0.04520540831816533 Pearson Correlation: 0.4532786475983117 Spearman Correlation: 0.33069988403845435 Coefficient of Determination: -0.19034964698279744 RMSE: 0.7070932367252541 NRMSE: 0.17064296081406813 MAPE: 165.34783043143003 Predictor: RandomForests Pearson Correlation: 0.8657733854466981 Spearman Correlation: 0.7126570636940133 Coefficient of Determination: 0.7460606755388315 RMSE: 0.22615757676800527 NRMSE: 0.08055479136883535 MAPE: 53.283439076973046 Pearson Correlation: 0.7804508424177721 Spearman Correlation: 0.7345527065234855 Coefficient of Determination: 0.5790994087397865 RMSE: 0.42046434842546676 NRMSE: 0.1014707503983075 MAPE: 77.30100212412513 Protein: CCND1 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.7083172825101813e-15 NRMSE: 1.075983373545161e-15 MAPE: 3.8179846190573375e-12 Pearson Correlation: 0.0265788728496387 Spearman Correlation: 0.02881582064614272 Coefficient of Determination: -3.020564652871097 RMSE: 0.5533348197132124 NRMSE: 0.3535188789519763 MAPE: 746.5858253254537 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.017360898466118563, tolerance: 0.0027873943484564415 positive)
Pearson Correlation: 0.9999993355132581 Spearman Correlation: 0.9999958386937444 Coefficient of Determination: 0.9999984732599365 RMSE: 0.00028124876289408965 NRMSE: 0.000177144489377009 MAPE: 1.2240744820886427 Pearson Correlation: 0.07177965898802971 Spearman Correlation: 0.14469257721417975 Coefficient of Determination: -4.0599202846322635 RMSE: 0.6207494054795146 NRMSE: 0.3965892369631838 MAPE: 748.1230662172266 Predictor: RandomForests Pearson Correlation: 0.5772039686962488 Spearman Correlation: 0.5761593216207717 Coefficient of Determination: 0.29410574977840553 RMSE: 0.19123962875762068 NRMSE: 0.12045225030082932 MAPE: 524.8118996118529 Pearson Correlation: 0.33687405154150296 Spearman Correlation: 0.2896220651130314 Coefficient of Determination: 0.11048988544855287 RMSE: 0.26026748785940274 NRMSE: 0.16628172899618118 MAPE: 246.35002437488276 Protein: ERBB2 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 4.496230208706631e-15 NRMSE: 7.66006816141648e-16 MAPE: 5.589972065692479e-12 Pearson Correlation: 0.4638687987319319 Spearman Correlation: 0.2547637751094154 Coefficient of Determination: -1.2481257783734794 RMSE: 1.3010382066292323 NRMSE: 0.2878721554661428 MAPE: 2506.6454297561295 Predictor: ElasticNet Pearson Correlation: 0.9999997687317369 Spearman Correlation: 0.9999953763262053 Coefficient of Determination: 0.9999995344304293 RMSE: 0.0007013773726623545 NRMSE: 0.00011949117887836764 MAPE: 1.8349461758241716 Pearson Correlation: 0.4367334616767104 Spearman Correlation: 0.2811680943652664 Coefficient of Determination: -1.6868395069033828 RMSE: 1.4223307859705472 NRMSE: 0.31470976567552766 MAPE: 868.9424893946926 Predictor: RandomForests Pearson Correlation: 0.8580389027969332 Spearman Correlation: 0.6847989590834758 Coefficient of Determination: 0.729612724287021 RMSE: 0.5345059969698536 NRMSE: 0.09106189361804753 MAPE: 525.5829048697718 Pearson Correlation: 0.8030264297651519 Spearman Correlation: 0.6310997701256619 Coefficient of Determination: 0.6314396015619157 RMSE: 0.5267858270806907 NRMSE: 0.11655843059645772 MAPE: 218.73100656846725 Protein: ERBB3 x_train_column_count: 1001 x_train columns: ['CPB1', 'COL1A1', 'SCGB2A2', 'FN1', 'COL1A2', 'COL3A1', 'ADAM6', 'IGFBP5', 'CSN2', 'MGP', 'BMS1P20', 'CHGA', 'PIP', 'CD24', 'MMP9', 'LTF', 'SPARC', 'APOD', 'SCGB1D2', 'CHGB', 'ACTB', 'GAPDH', 'ERBB2', 'SLC39A6', 'C4A', 'CLU', 'FDCSP', 'CARTPT', 'EEF1A1', 'CD74', 'SERPINA3', 'MUCL1', 'LALBA', 'DCD', 'B2M', 'IGF2', 'XBP1', 'ACTG1', 'AZGP1', 'HLA-B', 'PABPC1', 'RPS3', 'CTSD', 'RPL19', 'COL6A2', 'FTL', 'FASN', 'KRT19', 'CXCL14', 'RPL8', 'SMR3B', 'GNAS', 'IGF1R', 'TPT1', 'SCD', 'EEF2', 'POSTN', 'AHNAK', 'KRT8', 'OLFM4', 'ALDOA', 'COL6A3', 'CLTC', 'HSP90AA1', 'FTH1', 'HSP90AB1', 'GLUL', 'KRT5', 'RPS6', 'CCND1', 'CEACAM6', 'STC2', 'HLA-A', 'NTS', 'CLEC3A', 'HLA-C', 'KRT14', 'S100A9', 'A2M', 'RPL3', 'COL6A1', 'TMSB10', 'KRT1', 'NPY1R', 'BGN', 'RPS4X', 'PPP1R1B', 'TIMP3', 'RPS18', 'HSPA1A', 'YWHAZ', 'COX6C', 'RPS24', 'TMSB4XP8', 'RPL23', 'VIM', 'CFB', 'LUM', 'PSAP', 'CYP2A6', 'ENO1', 'AGR2', 'P4HB', 'DSP', 'RPLP1', 'PCSK1', 'SCUBE2', 'SERPINA1', 'KRT18', 'RGS5', 'APP', 'RPLP0', 'HLA-DRA', 'AEBP1', 'GJA1', 'TFF3', 'FLNA', 'FABP7', 'CSN3', 'COL12A1', 'CRABP2', 'MYH9', 'RPS11', 'MUC1', 'S100A8', 'DHRS2', 'DCN', 'CRISP3', 'ESR1', 'DHCR24', 'HSPA8', 'ALB', 'TFF1', 'MAGED2', 'RPL4', 'RPL13A', 'CALR', 'RPS8', 'RPS20', 'PKM', 'RPL13', 'C3', 'LASP1', 'S100A6', 'CTSB', 'RPL28', 'HSPB1', 'RPL30', 'CD44', 'UBC', 'MMP11', 'RPS19', 'RAB11FIP1', 'THBS1', 'KRT17', 'TUBB', 'IGFBP4', 'LGALS3BP', 'PEG10', 'TMBIM6', 'CA12', 'SLC40A1', 'NDRG1', 'SFRP2', 'KRT10', 'IFI6', 'RPS12', 'COL5A2', 'GFRA1', 'KRT15', 'GNB2L1', 'EEF1G', 'KRT7', 'ANPEP', 'TAGLN2', 'APLP2', 'LY6E', 'LYZ', 'MUC6', 'TAT', 'TBC1D9', 'MUC5B', 'PLAT', 'FLNB', 'RPS2', 'CDH1', 'CD59', 'RPL18', 'RPL32', 'SLC7A2', 'ATP1A1', 'RPL41', 'MMP2', 'LAPTM4B', 'GATA3', 'PRSS23', 'VCAN', 'COL5A1', 'NEAT1', 'BMPR1B', 'SPP1', 'HSPA5', 'ABHD2', 'RPL5', 'SFRP1', 'TRPS1', 'RPL37', 'TAGLN', 'S100A11', 'RPLP2', 'LDHA', 'GABRP', 'RPS16', 'TXNIP', 'TUBA1B', 'PSMD3', 'CYBRD1', 'APOE', 'CANX', 'RPL37A', 'LRRC75A-AS1', 'PTMA', 'TIMP1', 'MUC2', 'IFITM3', 'TNC', 'SLC9A3R1', 'CD164', 'RPL11', 'MFGE8', 'CTSK', 'BPIFB1', 'PTPRF', 'RPS9', 'ELOVL5', 'RPL7A', 'FOS', 'EIF4G2', 'S100A7', 'HSP90B1', 'FGFR2', 'CTGF', 'PI15', 'CCT6A', 'H3F3B', 'THBS2', 'TM4SF1', 'ANXA2', 'RPS5', 'SLC30A8', 'LRP2', 'STAT1', 'FADS2', 'PIGR', 'MYL6', 'MMP14', 'SULF1', 'BTG2', 'SCGB2A1', 'KIAA1324', 'SLPI', 'RPL27A', 'RPL31', 'IFI27', 'CFL1', 'RPS17', 'FAM198B', 'C1S', 'SPINT2', 'ASAH1', 'XIST', 'MXRA5', 'SDC1', 'COL11A1', 'CST3', 'TPM4', 'ORMDL3', 'BCAM', 'IFITM1', 'SH3BGRL', 'JCHAIN', 'RPL36', 'RPS14', 'ACTA2', 'MAL2', 'RAD21', 'CRIP1', 'KRT6B', 'CXCL13', 'RPL10', 'SEPP1', 'SLC38A1', 'PGR', 'MMP7', 'ACAN', 'RPL15', 'SQSTM1', 'HSPD1', 'RPL12', 'MX1', 'LDHB', 'PBX1', 'CP', 'EGR1', 'LGALS1', 'KRT6A', 'TIMP2', 'KRT16', 'PDIA3', 'RPL35', 'NME2', 'HMGCS2', 'FBN1', 'TPD52', 'RPL35A', 'LACRT', 'NAT1', 'EIF3H', 'ALOX15B', 'COL4A1', 'EEF1D', 'BHLHE40', 'COL4A2', 'SSFA2', 'PGK1', 'KRT81', 'RPL29', 'RHOB', 'LRP1', 'CYP2B7P', 'FSTL1', 'PCOLCE', 'TACSTD2', 'RPL27', 'CYP1B1', 'ITGB1', 'CTTN', 'GSN', 'STARD10', 'PERP', 'CHI3L1', 'NUMA1', 'TSPAN13', 'RPN2', 'TMEM123', 'PRKACB', 'AP2B1', 'SLITRK6', 'FGFR1', 'PPIB', 'ADAR', 'YBX1', 'CD63', 'HLA-DRB1', 'SERF2', 'HDLBP', 'BSG', 'ACTN4', 'NOTCH3', 'CYP4Z1', 'ARF1', 'PDCD4', 'ACP5', 'RPS15A', 'PAK1', 'MSN', 'RPL26', 'ECM1', 'PRDX1', 'LINC00657', 'ACTG2', 'CSN1S1', 'PFN1', 'RPS23', 'ALDH3B2', 'HLA-DPA1', 'CSTB', 'RARRES1', 'RPL24', 'LMNA', 'UBB', 'PRKDC', 'COL2A1', 'CEACAM5', 'SLC7A5', 'KIAA1467', 'GPNMB', 'SERPINA6', 'HLA-E', 'NACA', 'ANO1', 'SREBF1', 'CERS2', 'DLK1', 'IGFBP2', 'B4GALT1', 'GOLM1', 'FKBP4', 'USP22', 'UBA52', 'CSDE1', 'ASPH', 'SLC25A6', 'PRLR', 'ALCAM', 'SULF2', 'RPL10A', 'SERHL2', 'RPS27A', 'MAOB', 'ANTXR1', 'CALM2', 'CLIC6', 'ELN', 'EGFR', 'EFHD1', 'HSPG2', 'TPI1', 'PROL1', 'MLPH', 'SOD2', 'SRRM2', 'PREX1', 'NTRK2', 'DDX5', 'MYH11', 'NPNT', 'CTNND1', 'SLC12A2', 'TOP2A', 'H19', 'GRINA', 'JUP', 'RPL38', 'SDC4', 'S100A14', 'CXCL9', 'WWP1', 'MYBPC1', 'GRN', 'CD81', 'DSTN', 'MED1', 'SPARCL1', 'CA2', 'HDGF', 'EIF3CL', 'NUCKS1', 'CILP', 'ATP1B1', 'SERPINH1', 'STOM', 'PTPN1', 'TNFSF10', 'LRRC59', 'S100A1', 'NCL', 'OS9', 'HTRA1', 'SYNGR2', 'RAB31', 'GSTP1', 'CTNNB1', 'S100A2', 'SUMF2', 'TGFBI', 'MARCKSL1', 'FGB', 'STC1', 'TSKU', 'RPL14', 'PPT1', 'RPS21', 'RPSAP58', 'ZFP36L1', 'CD9', 'GPRC5A', 'MCCC2', 'PLEC', 'RPL34', 'FMOD', 'AIM1', 'CYP2A7', 'RNF213', 'H1F0', 'MIF', 'ERBB3', 'FBLN1', 'CD46', 'ATP5B', 'VTCN1', 'NPM1', 'NDUFC2', 'MCL1', 'PDIA6', 'PTMS', 'SARAF', 'IGSF1', 'GPI', 'FOXA1', 'RPS25', 'CELSR1', 'CALD1', 'MDK', 'NFE2L1', 'TPM3', 'STMN1', 'ARL6IP1', 'SAT1', 'PGAP3', 'IDH2', 'DDR1', 'STEAP4', 'COPA', 'BTF3', 'CYR61', 'IL6ST', 'BST2', 'GSTM3', 'RPS10', 'CALML5', 'MSL1', 'UGT2B11', 'TOB1', 'TCEAL4', 'SMOC2', 'RPS7', 'CCT3', 'ARHGDIB', 'CSRP1', 'PHGDH', 'ERGIC1', 'NBL1', 'CD36', 'MYL9', 'EVL', 'CASC3', 'CPE', 'ISG15', 'IQGAP1', 'ERLIN2', 'WARS', 'TAP1', 'OAZ1', 'YWHAE', 'RPL6', 'SYNM', 'ITGB6', 'HNRNPA2B1', 'NQO1', 'EZR', 'COL10A1', 'CELSR2', 'LAMP1', 'MIEN1', 'CLDN4', 'PLOD1', 'DDIT4', 'ITM2B', 'SERINC1', 'SPTBN2', 'UBD', 'MLLT6', 'EIF3E', 'DBI', 'ACTN1', 'PPDPF', 'CAPRIN1', 'RPS13', 'SERPING1', 'YWHAQ', 'ELP2', 'GANAB', 'EMP2', 'DST', 'RRBP1', 'TUBA1A', 'MORF4L2', 'S100A16', 'MAGED1', 'TMED2', 'AFF3', 'CPD', 'QSOX1', 'CCDC80', 'ARMT1', 'ASPN', 'MSLN', 'CRYAB', 'PRKAR1A', 'H3F3A', 'TFRC', 'CYB561', 'TPM1', 'C1R', 'LRRC15', 'MALAT1', 'CAPN2', 'CCT5', 'COMP', 'VAV3', 'TTC3', 'JUN', 'YWHAB', 'DYNC1H1', 'SYT13', 'AQP3', 'THY1', 'PTRF', 'PADI2', 'EIF4A1', 'WFDC2', 'ZFP36', 'COL18A1', 'EIF1', 'SSR2', 'DUSP1', 'RARA', 'NRAS', 'CALU', 'GLTSCR2', 'LCP1', 'KCNE4', 'NELL2', 'RAB1B', 'MACF1', 'TRPA1', 'TRIM28', 'H2AFJ', 'FKBP5', 'SEC61A1', 'ENAH', 'MED24', 'TXNDC5', 'UGDH', 'LAPTM5', 'FGG', 'GRB2', 'UBA1', 'FAU', 'AQP1', 'CTSZ', 'PROM1', 'AZIN1', 'SLC29A1', 'ITGB5', 'S100A10', 'CHIT1', 'FAT1', 'PRR4', 'RPSA', 'ADAM9', 'PIGT', 'RPL23A', 'KIAA0100', 'GALNT6', 'NOTCH2', 'MRC2', 'GP2', 'HLA-DPB1', 'RHOA', 'SLC39A8', 'AGRN', 'IER3', 'IFIT1', 'PXDN', 'VMP1', 'RDH10', 'EIF4G1', 'CRISPLD1', 'ADAM15', 'PALLD', 'EIF4B', 'PDLIM5', 'IFI30', 'TMEM64', 'CXCL17', 'SUB1', 'LAMB2', 'RPS15', 'LBP', 'ERGIC3', 'TSPAN1', 'EPCAM', 'OAS3', 'PAM', 'MT2A', 'ADIPOR2', 'MSMB', 'OAS2', 'DSC2', 'ATP5A1', 'TKT', 'TUBB4B', 'PTP4A2', 'SDC2', 'SEMA3C', 'GDI2', 'PSMB3', 'EFEMP1', 'ITGB4', 'WHSC1L1', 'EEF1A2', 'CLCA2', 'CD151', 'DEGS1', 'THSD4', 'SCARB2', 'ZNF652', 'AES', 'SEPT9', 'AGPAT6', 'BZW1', 'RPS29', 'FBLN2', 'KDELR2', 'UCP2', 'PRSS8', 'RPL22', 'RBBP7', 'TRAM1', 'ATP6AP1', 'SLC44A2', 'FXYD3', 'ACSL3', 'PDIA4', 'EIF5A', 'RPL17', 'COL14A1', 'SYTL2', 'RPN1', 'CTNNA1', 'KPNA2', 'PRELP', 'ECE1', 'HUWE1', 'VWF', 'MYL12B', 'RHOC', 'TOMM20', 'TMEM59', 'SERPINA5', 'CDK12', 'HACD3', 'ITGA6', 'RET', 'PHB', 'HNRNPU', 'EXOC2', 'SLC2A1', 'NR4A1', 'BPIFA1', 'MGST1', 'RTN3', 'CRIP2', 'GNB1', 'SMARCE1', 'REEP5', 'PKP1', 'PPP1CB', 'MDM2', 'SFRP4', 'MS4A7', 'BCAP31', 'NTN4', 'TAPBP', 'HLA-DQA1', 'SLC34A2', 'AP2M1', 'CRAT', 'ATP5E', 'NFIX', 'F11R', 'SPTBN1', 'UBE2Z', 'SUSD2', 'TLN1', 'SMARCD2', 'CLIC4', 'BAMBI', 'AARD', 'JUNB', 'S100P', 'NDUFB9', 'C8ORF4', 'VCP', 'CAP1', 'LTBP2', 'CBX3', 'IGFBP7', 'NAP1L1', 'PEG3', 'PDGFRB', 'BUB3', 'CAPNS1', 'HMGN2', 'PTTG1IP', 'ANXA1', 'FAM213A', 'WNK1', 'ATP2A3', 'HSPA9', 'ARHGDIA', 'ELF3', 'NUCB2', 'TMED10', 'AMFR', 'ILF2', 'PSMB4', 'PLIN4', 'PNMT', 'FSCN1', 'PEBP1', 'HEBP1', 'KTN1', 'HLA-DQB1', 'STARD3', 'NES', 'COX4I1', 'EIF4A2', 'CCT2', 'SERPINF1', 'ZFP36L2', 'CEL', 'PLXNB2', 'HLA-DRB5', 'ZNF217', 'HID1', 'SEC16A', 'EMP1', 'CLSTN2', 'MYO6', 'MAPT', 'MED13L', 'TRH', 'SERBP1', 'CDV3', 'IGFBP3', 'ATP9A', 'MYLK', 'DDX17', 'CPNE3', 'EIF2S3', 'SOX4', 'GREB1', 'PARP1', 'EPRS', 'CDK2AP1', 'TNFAIP2', 'ISLR', 'STAT3', 'ASS1', 'CKB', 'STAC2', 'PLD3', 'CIRBP', 'SPDEF', 'LAMC1', 'MAPKAPK2', 'FCGRT', 'LRIG1', 'MYOF', 'PLA2G2A', 'LAPTM4A', 'DPYSL3', 'GALNT7', 'RNASE1', 'TOMM6', 'EIF3L', 'SFN', 'CPNE1', 'MTDH', 'CRABP1', 'HSPH1', 'SERHL', 'KCTD3', 'DSG2', 'NPTX1', 'NGRN', 'MLEC', 'FKBP10', 'RARRES3', 'GNS', 'SLC25A5', 'PCBP2', 'PCM1', 'HMGB1', 'EHF', 'ITPR2', 'EEF1A1P9', 'ST14', 'RPS3A', 'FABP4', 'PRPF8', 'LGALS3', 'SCG2', 'SERINC2', 'PRKCSH', 'COTL1', 'DCAF10', 'NRIP3', 'S100A7A', 'ABCC11', 'ANXA6', 'SRP9', 'ACTR2', 'GTF2IP1', 'CALCOCO2', 'NFIB', 'NUFIP2', 'PMEPA1', 'AHCY', 'PVRL2', 'ANKRD50', 'SEPT2', 'SLC7A8', 'CNN3', 'C1QA', 'TM9SF2', 'CACNG4', 'ADIRF', 'FAM129A', 'SET', 'ATF4', 'CXCL10', 'KRT23', 'LAMP2', 'CDH3', 'DGAT2', 'GLYATL2', 'DEK', 'MXRA8', 'C1ORF43', 'QDPR', 'HNRNPK', 'KDM2A', 'SNRNP200', 'FAM84B', 'LAMB1', 'GAB2', 'SOD1', 'CHI3L2', 'ENSA', 'CHCHD2', 'CANT1', 'TCN1', 'GRB7', 'PYGB', 'ACADSB', 'TRIM29', 'ANXA5', 'PTK7', 'PPP2R1A', 'APH1A', 'FURIN', 'DDHD2', 'PIK3R1', 'CLSTN1', 'GBP1', 'CALM1', 'TUBA1C', 'TPM2', 'FGA', 'C1QB', 'MYL12A', 'MRFAP1', 'RABEP1', 'MTUS1', 'RHOBTB3', 'AGR3', 'DSG3', 'CSNK1A1', 'HN1L', 'ADCY1', 'TC2N', 'CCDC47', 'RAB6A', 'PIP4K2B', 'PDLIM1', 'ASH2L', 'LSR', 'SPTAN1', 'TGOLN2', 'SEC14L2', 'EPHX1', 'LRBA', 'ST3GAL1', 'MYADM', 'GFPT1', 'MARCKS', 'NRIP1', 'NONO', 'HNRNPC', 'IER2', 'CERS6', 'EMILIN1', 'ZMIZ1', 'PRRC2C', 'PTGES3', 'AGL', 'GeneMutation'] Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999997880816034 Coefficient of Determination: 1.0 RMSE: 3.289816967579878e-15 NRMSE: 8.878271764661104e-16 MAPE: 2.305468113654469e-12 Pearson Correlation: 0.09829078836974275 Spearman Correlation: 0.16984002294292946 Coefficient of Determination: -6.16742350773115 RMSE: 1.11631245467107 NRMSE: 0.5401058885405111 MAPE: 872.0560589332047 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.043485156732454504, tolerance: 0.011829371061673479 positive)
Pearson Correlation: 0.9999998753970482 Spearman Correlation: 0.9999982468567378 Coefficient of Determination: 0.9999997013255231 RMSE: 0.00025626467550933204 NRMSE: 6.915848070806997e-05 MAPE: 0.1789667136992725 Pearson Correlation: 0.04135032397471147 Spearman Correlation: 0.053050536789735536 Coefficient of Determination: -5.708990808746154 RMSE: 1.0800225797164353 NRMSE: 0.522547744245532 MAPE: 741.3041557512178 Predictor: RandomForests Pearson Correlation: 0.5616743250595057 Spearman Correlation: 0.567937520900465 Coefficient of Determination: 0.2774517930877187 RMSE: 0.39858697561320233 NRMSE: 0.10756718462521686 MAPE: 244.01419861376775 Pearson Correlation: 0.5391256347761149 Spearman Correlation: 0.5222384319006472 Coefficient of Determination: 0.236042106202056 RMSE: 0.36445083380373433 NRMSE: 0.17633238847890226 MAPE: 233.8984696518304
All-mRNA
ZScore
scenario = Scenario.AllmRNA_Mutations
normalizeTechnique = NormalizeTechnique.ZScore
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.648331 | 0.348611 | 0.770359 | -0.860535 | -0.0703 | -0.190586 | 0.719543 | 0.931178 | -0.283665 | -0.568745 | ... | 0.238689 | -0.239582 | -0.271725 | -0.222943 | -0.211122 | 0.792968 | -0.619672 | -0.946953 | -0.457066 | 0.454464 |
| TCGA-A1-A0SH-01 | -0.757220 | -0.562180 | -0.708360 | -0.860535 | -0.0703 | -0.190586 | -0.527186 | -0.611509 | -0.283665 | -0.568745 | ... | 0.739490 | -0.107967 | -1.200905 | -0.903627 | 1.252346 | 0.854083 | 0.108510 | -0.031025 | 0.991113 | -0.083768 |
| TCGA-A1-A0SJ-01 | -0.405237 | 0.254851 | -0.925065 | -0.223237 | -0.0703 | -0.190586 | -0.525012 | -0.390046 | -0.283665 | 1.475888 | ... | 0.592975 | 5.821247 | -1.079296 | -0.618408 | 0.444358 | -0.369825 | -0.573411 | -0.555512 | -0.488416 | -0.083768 |
| TCGA-A1-A0SK-01 | 3.940101 | 14.857648 | -0.228301 | -0.311392 | -0.0703 | -0.004913 | -0.697917 | -0.754652 | -0.283665 | -0.568745 | ... | 0.051750 | -0.027856 | 2.390553 | 0.357970 | 1.337526 | -1.597758 | 1.043918 | 0.590450 | -0.467061 | -0.083768 |
| TCGA-A1-A0SQ-01 | -1.114818 | -1.129592 | -0.842620 | -0.860535 | -0.0703 | -0.190586 | -0.507239 | -0.137487 | -0.283665 | -0.568745 | ... | 1.412610 | -0.008283 | -0.929428 | -0.853107 | 0.062384 | -0.434733 | -1.040418 | -0.606257 | -0.580936 | -0.083768 |
5 rows × 20133 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 1.0391164134354877e-15 NRMSE: 3.935301698297624e-16 MAPE: 4.307239887192267e-12 Pearson Correlation: 0.13179597370352522 Spearman Correlation: 0.16598380645790656 Coefficient of Determination: -0.0911008223477956 RMSE: 0.2929631866235892 NRMSE: 0.1447282110351043 MAPE: 167.88652230407624 Predictor: ElasticNet Pearson Correlation: 0.8952705443726068 Spearman Correlation: 0.7973954447405348 Coefficient of Determination: 0.7021043461690828 RMSE: 0.12231442716930824 NRMSE: 0.04632244922147632 MAPE: 238.01331169358093 Pearson Correlation: 0.25173889633913893 Spearman Correlation: 0.3289532728514291 Coefficient of Determination: 0.016244168257002367 RMSE: 0.278178953695141 NRMSE: 0.13742457808408184 MAPE: 133.10833917766226 Predictor: RandomForests Pearson Correlation: 0.6933273837561619 Spearman Correlation: 0.5010889251691739 Coefficient of Determination: 0.23985470925812802 RMSE: 0.19538620914000515 NRMSE: 0.07399591332702334 MAPE: 207.24958327600925 Pearson Correlation: 0.1750091903015725 Spearman Correlation: 0.23856209150326801 Coefficient of Determination: -0.010148390211437208 RMSE: 0.2818857990613799 NRMSE: 0.1392558153279913 MAPE: 138.0860113656779 Protein: CDH1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 4.904989530965482e-15 NRMSE: 8.244649842780634e-16 MAPE: 6.611882316206052e-12 Pearson Correlation: 0.5792766378202703 Spearman Correlation: 0.48438201151107213 Coefficient of Determination: 0.324337720925723 RMSE: 0.9537556366939867 NRMSE: 0.15447436699394038 MAPE: 391.6681914310409 Predictor: ElasticNet Pearson Correlation: 0.9921712217329451 Spearman Correlation: 0.985416601443779 Coefficient of Determination: 0.9744086242613864 RMSE: 0.18051862550885672 NRMSE: 0.030342834536644096 MAPE: 148.07191444327583 Pearson Correlation: 0.6154084147924682 Spearman Correlation: 0.5380548239196177 Coefficient of Determination: 0.3711663744926307 RMSE: 0.9201108650545092 NRMSE: 0.14902511500348373 MAPE: 309.9407988541228 Predictor: RandomForests Pearson Correlation: 0.7732678947731498 Spearman Correlation: 0.7352984469820248 Coefficient of Determination: 0.5885544464590073 RMSE: 0.7238213484856485 NRMSE: 0.12166496032905527 MAPE: 178.4499570808817 Pearson Correlation: 0.7701756512593205 Spearman Correlation: 0.7027802165642377 Coefficient of Determination: 0.584299669352693 RMSE: 0.7481048421263473 NRMSE: 0.12116627937649369 MAPE: 149.308514401682 Protein: CDH2 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999031343205 Coefficient of Determination: 1.0 RMSE: 1.6448213793388944e-15 NRMSE: 6.076469794777342e-16 MAPE: 4.584024899921339e-12 Pearson Correlation: 0.21878934798199118 Spearman Correlation: 0.2843234806360355 Coefficient of Determination: -0.02535163087360015 RMSE: 0.37984011875273077 NRMSE: 0.19602627793400978 MAPE: 164.48761647445176 Predictor: ElasticNet Pearson Correlation: 0.9532638504866415 Spearman Correlation: 0.9434698260584893 Coefficient of Determination: 0.8414915526263477 RMSE: 0.14778409448768087 NRMSE: 0.05459593349059278 MAPE: 477.7004820099626 Pearson Correlation: 0.29487377274218624 Spearman Correlation: 0.3070578480148278 Coefficient of Determination: 0.07473063720059414 RMSE: 0.36082657076606733 NRMSE: 0.1862138467079875 MAPE: 157.21976992812648 Predictor: RandomForests Pearson Correlation: 0.6688185198384442 Spearman Correlation: 0.5660072812773796 Coefficient of Determination: 0.24144265507661333 RMSE: 0.32329255079154257 NRMSE: 0.11943408837200996 MAPE: 670.2559424612903 Pearson Correlation: 0.19255182337652313 Spearman Correlation: 0.23710369720027316 Coefficient of Determination: 0.03276599456013407 RMSE: 0.3689182995515559 NRMSE: 0.19038979179003762 MAPE: 104.70485858161587 Protein: CDH3 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.1274284889667842e-15 NRMSE: 7.909780609577821e-16 MAPE: 9.477449880716094e-12 Pearson Correlation: 0.41279464508562924 Spearman Correlation: 0.4773534289337626 Coefficient of Determination: 0.07894154474085746 RMSE: 0.19633844151666713 NRMSE: 0.1502770292739184 MAPE: 487.60535186155147 Predictor: ElasticNet Pearson Correlation: 0.8681542455002275 Spearman Correlation: 0.8402422486584153 Coefficient of Determination: 0.6905903106985085 RMSE: 0.11614405275316828 NRMSE: 0.08148401298841576 MAPE: 412.33595919329764 Pearson Correlation: 0.46552382833325456 Spearman Correlation: 0.5348014827821677 Coefficient of Determination: 0.21541457290537835 RMSE: 0.18120987514774556 NRMSE: 0.13869765646473853 MAPE: 343.5981250158423 Predictor: RandomForests Pearson Correlation: 0.6819453148005277 Spearman Correlation: 0.6626043139206574 Coefficient of Determination: 0.35768015050390967 RMSE: 0.16734228431123513 NRMSE: 0.11740352213562548 MAPE: 445.60840572370466 Pearson Correlation: 0.4779240427651688 Spearman Correlation: 0.5321480831138427 Coefficient of Determination: 0.20585497473097558 RMSE: 0.18231048749262121 NRMSE: 0.13954006283351922 MAPE: 335.8197390195945 Protein: PTEN x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 2.51830267879816e-15 NRMSE: 3.9376165722745054e-16 MAPE: 4.971421338604094e-12 Pearson Correlation: 0.16095618650891472 Spearman Correlation: 0.20586284264949764 Coefficient of Determination: -0.4138748226893201 RMSE: 0.5905684045152155 NRMSE: 0.19463726996085146 MAPE: 281.1664349275821 Predictor: ElasticNet Pearson Correlation: 0.9791633550353197 Spearman Correlation: 0.9651452504667375 Coefficient of Determination: 0.9357538621434791 RMSE: 0.15879128008353702 NRMSE: 0.0248285951189957 MAPE: 231.79994661671057 Pearson Correlation: 0.2874832591621902 Spearman Correlation: 0.3241049653692323 Coefficient of Determination: -0.04934235640171347 RMSE: 0.5087721494119832 NRMSE: 0.16767917388833406 MAPE: 202.3012351616807 Predictor: RandomForests Pearson Correlation: 0.6740394053585816 Spearman Correlation: 0.587186557926808 Coefficient of Determination: 0.3524530768618164 RMSE: 0.504125608460897 NRMSE: 0.07882505018542679 MAPE: 209.7204315708839 Pearson Correlation: 0.3113484248373239 Spearman Correlation: 0.33553799629304465 Coefficient of Determination: 0.09513415461419306 RMSE: 0.4724510580281772 NRMSE: 0.15570860787956534 MAPE: 153.3158966621345 Protein: BRCA2 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999031343205 Coefficient of Determination: 1.0 RMSE: 8.549848564289291e-16 NRMSE: 5.530803930685373e-16 MAPE: 4.164537701949328e-12 Pearson Correlation: 0.22149613195751175 Spearman Correlation: 0.23190448725079096 Coefficient of Determination: -0.09177518200500767 RMSE: 0.19302564424096846 NRMSE: 0.19318018839168183 MAPE: 244.730972801599 Predictor: ElasticNet Pearson Correlation: 0.878388758114851 Spearman Correlation: 0.833661917878168 Coefficient of Determination: 0.6588171859497117 RMSE: 0.11542640986443005 NRMSE: 0.0746680875787135 MAPE: 155.71713676303077 Pearson Correlation: 0.23939439089661424 Spearman Correlation: 0.21742295559346425 Coefficient of Determination: 0.003783938783547991 RMSE: 0.1843848232606072 NRMSE: 0.1845324492199832 MAPE: 191.12924607806997 Predictor: RandomForests Pearson Correlation: 0.6637570448718417 Spearman Correlation: 0.5755910448604965 Coefficient of Determination: 0.25987150239341983 RMSE: 0.17000636347093012 NRMSE: 0.10997526520573023 MAPE: 146.3552986403964 Pearson Correlation: 0.3477468549941665 Spearman Correlation: 0.34818840623917 Coefficient of Determination: 0.09426495176621519 RMSE: 0.1758121919145527 NRMSE: 0.17595295427797508 MAPE: 132.7153706084248 Protein: CDKN2A x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.6582612239031292e-15 NRMSE: 6.009407084668541e-16 MAPE: 1.2754554896245628e-12 Pearson Correlation: 0.58053559819993 Spearman Correlation: 0.5063164569310312 Coefficient of Determination: 0.33391104617165535 RMSE: 0.6095483602727175 NRMSE: 0.16460933304691266 MAPE: 1089.0311738914652 Predictor: ElasticNet Pearson Correlation: 0.9805414202811037 Spearman Correlation: 0.9797517995269506 Coefficient of Determination: 0.9385763534941439 RMSE: 0.1592890990596425 NRMSE: 0.03600974320326494 MAPE: 97.41534644292945 Pearson Correlation: 0.5939607669111474 Spearman Correlation: 0.4620817481221345 Coefficient of Determination: 0.35189421116249964 RMSE: 0.6012637232457786 NRMSE: 0.16237205596699394 MAPE: 496.6563742465523 Predictor: RandomForests Pearson Correlation: 0.6757576783754224 Spearman Correlation: 0.6448690222035699 Coefficient of Determination: 0.44033132811556863 RMSE: 0.4808213648735813 NRMSE: 0.10869704190654035 MAPE: 154.52654980957473 Pearson Correlation: 0.7221345251728377 Spearman Correlation: 0.6426251097453908 Coefficient of Determination: 0.46808119539783233 RMSE: 0.5447092163880469 NRMSE: 0.14709943731786307 MAPE: 161.06382859885557 Protein: TP53 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.413695517014882e-15 NRMSE: 5.800758272085754e-16 MAPE: 4.885325885977415e-12 Pearson Correlation: 0.5149989615686507 Spearman Correlation: 0.5153789874158619 Coefficient of Determination: 0.23227873907887964 RMSE: 0.36856141099211354 NRMSE: 0.1325331407070062 MAPE: 535.9997686131766 Predictor: ElasticNet Pearson Correlation: 0.9667311471772038 Spearman Correlation: 0.9272869855480868 Coefficient of Determination: 0.9034915904111381 RMSE: 0.14067203416114488 NRMSE: 0.03380726608054432 MAPE: 375.4999692897002 Pearson Correlation: 0.520470335228409 Spearman Correlation: 0.5045800409716126 Coefficient of Determination: 0.25726083860742033 RMSE: 0.36251521541834436 NRMSE: 0.13035895408621107 MAPE: 378.6793094832907 Predictor: RandomForests Pearson Correlation: 0.7041667872817713 Spearman Correlation: 0.5825244907808984 Coefficient of Determination: 0.4160387624361329 RMSE: 0.3460327453106374 NRMSE: 0.08316095777712988 MAPE: 582.4479124159047 Pearson Correlation: 0.5017190451401102 Spearman Correlation: 0.4792654375182909 Coefficient of Determination: 0.24985500358126234 RMSE: 0.36431804798544415 NRMSE: 0.13100724513123238 MAPE: 317.31169737127556 Protein: CTNNB1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 3.943116888039113e-15 NRMSE: 7.94710862817001e-16 MAPE: 3.731887739610566e-12 Pearson Correlation: 0.4446599595207715 Spearman Correlation: 0.4121792995805288 Coefficient of Determination: 0.1645828010625936 RMSE: 0.6863841077132653 NRMSE: 0.17029328331098728 MAPE: 254.47031082011216 Predictor: ElasticNet Pearson Correlation: 0.9852418173966639 Spearman Correlation: 0.9828974155094463 Coefficient of Determination: 0.9506641925571633 RMSE: 0.16375220740702176 NRMSE: 0.03300324634843335 MAPE: 166.0625941735604 Pearson Correlation: 0.41630041564127757 Spearman Correlation: 0.3807335869671252 Coefficient of Determination: 0.13113200155473492 RMSE: 0.6999909326833714 NRMSE: 0.17366916406573996 MAPE: 290.7429002261767 Predictor: RandomForests Pearson Correlation: 0.6958716069864783 Spearman Correlation: 0.7270459101267467 Coefficient of Determination: 0.46774619138549045 RMSE: 0.5378552743222103 NRMSE: 0.10840140966245648 MAPE: 391.92002391752135 Pearson Correlation: 0.5495634602656705 Spearman Correlation: 0.49940981367671455 Coefficient of Determination: 0.2936067874204358 RMSE: 0.6311589896836212 NRMSE: 0.1565918199979212 MAPE: 227.33495816718624 Protein: CCNE1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 2.0738961765787106e-15 NRMSE: 5.004938042277942e-16 MAPE: 4.723975910949902e-13 Pearson Correlation: 0.7628508830315441 Spearman Correlation: 0.6531606672519755 Coefficient of Determination: 0.5777525392307403 RMSE: 0.34897167105884896 NRMSE: 0.12429979378765768 MAPE: 47.63361875179854 Predictor: ElasticNet Pearson Correlation: 0.9739003932801936 Spearman Correlation: 0.9206252408322937 Coefficient of Determination: 0.9383948250898795 RMSE: 0.12004906727381645 NRMSE: 0.028971466871109505 MAPE: 31.914164383675008 Pearson Correlation: 0.8137719741936363 Spearman Correlation: 0.6612476831528632 Coefficient of Determination: 0.6358107812798437 RMSE: 0.3240934040066539 NRMSE: 0.11543843419649291 MAPE: 43.631027035539674 Predictor: RandomForests Pearson Correlation: 0.8619608055620112 Spearman Correlation: 0.721221896357916 Coefficient of Determination: 0.7340363731928504 RMSE: 0.24943725349445064 NRMSE: 0.06019674529875489 MAPE: 55.03911668700968 Pearson Correlation: 0.8454021999124921 Spearman Correlation: 0.7066419199716119 Coefficient of Determination: 0.7081056246953976 RMSE: 0.2901479543571651 NRMSE: 0.10334744589747644 MAPE: 43.80770051699558 Protein: CCND1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.0144305640768037e-15 NRMSE: 6.098463190756416e-16 MAPE: 2.339817039315697e-12 Pearson Correlation: 0.42713171268924666 Spearman Correlation: 0.4246805189737587 Coefficient of Determination: 0.1514195304157292 RMSE: 0.21642977672454095 NRMSE: 0.15414347952007076 MAPE: 1315.7222657406426 Predictor: ElasticNet Pearson Correlation: 0.904392223485366 Spearman Correlation: 0.8967651532935175 Coefficient of Determination: 0.7224435943040723 RMSE: 0.12585801604868113 NRMSE: 0.07566219959401783 MAPE: 231.76025191425737 Pearson Correlation: 0.5505609514462775 Spearman Correlation: 0.4963564530289728 Coefficient of Determination: 0.3030468813289844 RMSE: 0.1961427582514751 NRMSE: 0.13969485944638133 MAPE: 1453.8197038289454 Predictor: RandomForests Pearson Correlation: 0.6338057036352781 Spearman Correlation: 0.620421249067014 Coefficient of Determination: 0.28391157583574955 RMSE: 0.2021569053523872 NRMSE: 0.12153088537614506 MAPE: 338.77645563255635 Pearson Correlation: 0.4872011366258099 Spearman Correlation: 0.48245049263486495 Coefficient of Determination: 0.18785272592403846 RMSE: 0.2117326781634329 NRMSE: 0.15079815834100116 MAPE: 1032.9296401308645 Protein: ERBB2 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 4.220676607130351e-15 NRMSE: 7.190617249825972e-16 MAPE: 5.6568307147407994e-12 Pearson Correlation: 0.7680144183300829 Spearman Correlation: 0.6555555555555556 Coefficient of Determination: 0.5840445009439719 RMSE: 0.5849922427566174 NRMSE: 0.10847250931886102 MAPE: 370.31111451768317 Predictor: ElasticNet Pearson Correlation: 0.9908506237143055 Spearman Correlation: 0.9782362581020881 Coefficient of Determination: 0.977604489631744 RMSE: 0.1525151850968625 NRMSE: 0.025983471914554832 MAPE: 173.66874455641633 Pearson Correlation: 0.791684231008573 Spearman Correlation: 0.6305238513315775 Coefficient of Determination: 0.6244986811767853 RMSE: 0.5558177418198147 NRMSE: 0.10306281138880302 MAPE: 241.63558125071262 Predictor: RandomForests Pearson Correlation: 0.869172532366925 Spearman Correlation: 0.7395498217872886 Coefficient of Determination: 0.7467587109003628 RMSE: 0.5128612209707207 NRMSE: 0.08737434979142387 MAPE: 421.71458010945724 Pearson Correlation: 0.8216136285101037 Spearman Correlation: 0.6579016681299386 Coefficient of Determination: 0.66855529898096 RMSE: 0.5221944024220049 NRMSE: 0.09682818513295102 MAPE: 273.6571780559403 Protein: ERBB3 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 1.9993283454850627e-15 NRMSE: 5.395613364795998e-16 MAPE: 1.319846835759038e-12 Pearson Correlation: 0.3092919082396043 Spearman Correlation: 0.33712361857846074 Coefficient of Determination: -0.016617546535260264 RMSE: 0.4693710352079469 NRMSE: 0.18833904532933152 MAPE: 290.53058879861294 Predictor: ElasticNet Pearson Correlation: 0.964904625026298 Spearman Correlation: 0.9574522156764707 Coefficient of Determination: 0.8912096430131375 RMSE: 0.151439288074749 NRMSE: 0.04086911729814274 MAPE: 91.50391792974017 Pearson Correlation: 0.32686983970847544 Spearman Correlation: 0.34960778168958495 Coefficient of Determination: 0.06173826064749588 RMSE: 0.4509199900149206 NRMSE: 0.18093540945000344 MAPE: 262.211855137419 Predictor: RandomForests Pearson Correlation: 0.6281512960394475 Spearman Correlation: 0.6155425243234566 Coefficient of Determination: 0.33616357735568236 RMSE: 0.3740881032151516 NRMSE: 0.10095564212236278 MAPE: 222.173589618229 Pearson Correlation: 0.42038038819404727 Spearman Correlation: 0.4375773553526755 Coefficient of Determination: 0.1655756321623124 RMSE: 0.4252369303321939 NRMSE: 0.17062986739703465 MAPE: 257.3137612520108 Fold: 2 Protein: RB1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 1.1847393664172798e-15 NRMSE: 4.332721498015213e-16 MAPE: 5.3140908618017446e-12 Pearson Correlation: 0.009070348473856555 Spearman Correlation: 0.12197346600331677 Coefficient of Determination: -0.3997893098763874 RMSE: 0.2897525592664556 NRMSE: 0.1660073559753272 MAPE: 743.94198258375 Predictor: ElasticNet Pearson Correlation: 0.9035187381985814 Spearman Correlation: 0.814807398491747 Coefficient of Determination: 0.7260442457380829 RMSE: 0.12302237144132962 NRMSE: 0.044990627355664725 MAPE: 153.90056808798968 Pearson Correlation: 0.08646334347404377 Spearman Correlation: 0.14846356453028975 Coefficient of Determination: -0.09518932203182007 RMSE: 0.25629524257402214 NRMSE: 0.14683872224107788 MAPE: 398.63855870498213 Predictor: RandomForests Pearson Correlation: 0.7019345453305204 Spearman Correlation: 0.5247224875481156 Coefficient of Determination: 0.2606933403482671 RMSE: 0.20209528911832295 NRMSE: 0.07390845857165117 MAPE: 185.3491423029556 Pearson Correlation: -0.05052807895531337 Spearman Correlation: 0.08424056189640036 Coefficient of Determination: -0.07902955601155437 RMSE: 0.2543973685461368 NRMSE: 0.14575137705889518 MAPE: 239.5684365817415 Protein: CDH1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 4.704101974885466e-15 NRMSE: 7.546485882546668e-16 MAPE: 3.9920987443402085e-12 Pearson Correlation: 0.5952807631218563 Spearman Correlation: 0.5983806457906546 Coefficient of Determination: 0.2968902926046091 RMSE: 0.9648136445734281 NRMSE: 0.17133966339432216 MAPE: 381.30803672797725 Predictor: ElasticNet Pearson Correlation: 0.9919950557992406 Spearman Correlation: 0.9839253350079987 Coefficient of Determination: 0.9737141014108106 RMSE: 0.1816816219447568 NRMSE: 0.02914600496426675 MAPE: 129.82952336446618 Pearson Correlation: 0.6200980914566517 Spearman Correlation: 0.6079650765778949 Coefficient of Determination: 0.35081088893506784 RMSE: 0.9270806211541083 NRMSE: 0.1646387180170677 MAPE: 329.57946960948135 Predictor: RandomForests Pearson Correlation: 0.7964504384467044 Spearman Correlation: 0.7145644874126769 Coefficient of Determination: 0.6264875916586781 RMSE: 0.6848604727581373 NRMSE: 0.1098677264391012 MAPE: 154.0759487880514 Pearson Correlation: 0.6716803094562147 Spearman Correlation: 0.6920163497124057 Coefficient of Determination: 0.4172705513252264 RMSE: 0.8783454840226638 NRMSE: 0.15598392541691772 MAPE: 217.21817494677728 Protein: CDH2 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 1.7929530380113885e-15 NRMSE: 6.496677433188596e-16 MAPE: 1.956037627694953e-11 Pearson Correlation: 0.3084915219007646 Spearman Correlation: 0.3218515266803239 Coefficient of Determination: 0.06230833970406591 RMSE: 0.3748272723220205 NRMSE: 0.1974677043268098 MAPE: 516.8021614385113 Predictor: ElasticNet Pearson Correlation: 0.9556138600247516 Spearman Correlation: 0.9395563978133935 Coefficient of Determination: 0.8456543091057187 RMSE: 0.14461423681556512 NRMSE: 0.05240025973460582 MAPE: 305.25288325613514 Pearson Correlation: 0.25845215213358186 Spearman Correlation: 0.30284850258511364 Coefficient of Determination: 0.04703549075877134 RMSE: 0.3778674815916391 NRMSE: 0.19906935711324017 MAPE: 311.60617019350235 Predictor: RandomForests Pearson Correlation: 0.6899993307955405 Spearman Correlation: 0.6002095010894487 Coefficient of Determination: 0.2385066092132786 RMSE: 0.32121577435580484 NRMSE: 0.11639096106812263 MAPE: 445.54159801177747 Pearson Correlation: 0.24046238935380176 Spearman Correlation: 0.2997414886352551 Coefficient of Determination: 0.04058556523248347 RMSE: 0.37914408058876475 NRMSE: 0.19974189908636464 MAPE: 132.45287071003776 Protein: CDH3 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 8.833474537343726e-16 NRMSE: 6.64805832437269e-16 MAPE: 1.7126130621968509e-12 Pearson Correlation: 0.366170174121517 Spearman Correlation: 0.40837479270315097 Coefficient of Determination: -0.16533711445284527 RMSE: 0.21366427781996922 NRMSE: 0.17581196233026353 MAPE: 1647.2092793392892 Predictor: ElasticNet Pearson Correlation: 0.8710574307232035 Spearman Correlation: 0.8374879474879539 Coefficient of Determination: 0.6946514022367187 RMSE: 0.11477531268162715 NRMSE: 0.08637971046158899 MAPE: 221.50858081432068 Pearson Correlation: 0.4176870387886317 Spearman Correlation: 0.44503463076773003 Coefficient of Determination: 0.004644803452145241 RMSE: 0.19746729368067822 NRMSE: 0.16248440194246544 MAPE: 1471.140255667932 Predictor: RandomForests Pearson Correlation: 0.6904225074888862 Spearman Correlation: 0.6753902863485073 Coefficient of Determination: 0.38912127534821395 RMSE: 0.16234092628059385 NRMSE: 0.12217751257260227 MAPE: 268.8520228414901 Pearson Correlation: 0.3241369704191651 Spearman Correlation: 0.4028387474392742 Coefficient of Determination: -0.023452337408445212 RMSE: 0.20023497650625108 NRMSE: 0.16476176788138822 MAPE: 1367.1896654321024 Protein: PTEN x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 2.699857437131856e-15 NRMSE: 4.221495484531086e-16 MAPE: 1.7047143949619563e-12 Pearson Correlation: 0.154887966621287 Spearman Correlation: 0.1278997171007707 Coefficient of Determination: -0.3391202012615986 RMSE: 0.5920602757866247 NRMSE: 0.19857132941595945 MAPE: 2201.772408006431 Predictor: ElasticNet Pearson Correlation: 0.9793734679598618 Spearman Correlation: 0.9639807700712651 Coefficient of Determination: 0.9367558540737937 RMSE: 0.1568629799155651 NRMSE: 0.024527086219304998 MAPE: 156.46982620520785 Pearson Correlation: 0.36273970789997567 Spearman Correlation: 0.28774753682567555 Coefficient of Determination: 0.07326469236340882 RMSE: 0.4925314840112002 NRMSE: 0.16519032868634298 MAPE: 1185.845177740379 Predictor: RandomForests Pearson Correlation: 0.6513197554323388 Spearman Correlation: 0.5621727882971 Coefficient of Determination: 0.3485313615204926 RMSE: 0.5034508191830315 NRMSE: 0.07871954017403353 MAPE: 222.06255688121269 Pearson Correlation: 0.3104509256650349 Spearman Correlation: 0.3217393425031705 Coefficient of Determination: 0.09372728930423069 RMSE: 0.48706350954849076 NRMSE: 0.16335642257462127 MAPE: 470.8149087398989 Protein: BRCA2 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 0.9999999225074571 Coefficient of Determination: 1.0 RMSE: 8.813397665612486e-16 NRMSE: 5.677821011829594e-16 MAPE: 2.6702517376932897e-12 Pearson Correlation: 0.24613386439429658 Spearman Correlation: 0.22885084382011514 Coefficient of Determination: -0.07746669706608178 RMSE: 0.20053100153126435 NRMSE: 0.13573880008614483 MAPE: 259.34536162696594 Predictor: ElasticNet Pearson Correlation: 0.863563571882366 Spearman Correlation: 0.8093664387688411 Coefficient of Determination: 0.6372081469688019 RMSE: 0.11764819045787503 NRMSE: 0.07579203766009021 MAPE: 192.82118921382443 Pearson Correlation: 0.24241618417173974 Spearman Correlation: 0.25217051994927325 Coefficient of Determination: 0.04179689249005214 RMSE: 0.18910733855322262 NRMSE: 0.12800615878187177 MAPE: 217.96253994206808 Predictor: RandomForests Pearson Correlation: 0.663818717626981 Spearman Correlation: 0.5898657805859027 Coefficient of Determination: 0.26031531871416336 RMSE: 0.1679885962697643 NRMSE: 0.10822264214512116 MAPE: 177.06044327887844 Pearson Correlation: 0.384676469660368 Spearman Correlation: 0.4025704809286899 Coefficient of Determination: 0.09584042468537923 RMSE: 0.18369703139780622 NRMSE: 0.12434393899657234 MAPE: 146.28023498484745 Protein: CDKN2A x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 2.735481916078579e-15 NRMSE: 6.18397629948814e-16 MAPE: 2.8111050404558153e-12 Pearson Correlation: 0.489234051621247 Spearman Correlation: 0.41874451273046537 Coefficient of Determination: 0.2248038112828522 RMSE: 0.5929250033812237 NRMSE: 0.16018073356959792 MAPE: 223.57771550888882 Predictor: ElasticNet Pearson Correlation: 0.9825671696583215 Spearman Correlation: 0.9826936685805258 Coefficient of Determination: 0.9446060593406698 RMSE: 0.15612433191719183 NRMSE: 0.03529429906571534 MAPE: 104.21844277066299 Pearson Correlation: 0.5321957149160776 Spearman Correlation: 0.4281631060384353 Coefficient of Determination: 0.27421950625358116 RMSE: 0.5737155170561845 NRMSE: 0.1549912246207544 MAPE: 192.63988772493798 Predictor: RandomForests Pearson Correlation: 0.6834234499874097 Spearman Correlation: 0.6454562869232578 Coefficient of Determination: 0.4460122820102086 RMSE: 0.493730015762791 NRMSE: 0.11161524036685677 MAPE: 183.79123176509086 Pearson Correlation: 0.6949765984081145 Spearman Correlation: 0.5705784801482783 Coefficient of Determination: 0.4447885327299339 RMSE: 0.5017913424384337 NRMSE: 0.13556066091377614 MAPE: 140.77123805087118 Protein: TP53 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.268520012950425e-15 NRMSE: 6.0761216364012995e-16 MAPE: 3.2917358466679132e-12 Pearson Correlation: 0.30201679701252576 Spearman Correlation: 0.3049507365135109 Coefficient of Determination: -0.011901228227380267 RMSE: 0.4118123632310957 NRMSE: 0.1356207354622413 MAPE: 1968.008918326836 Predictor: ElasticNet Pearson Correlation: 0.9676252271587192 Spearman Correlation: 0.9351978116261325 Coefficient of Determination: 0.9042876189672564 RMSE: 0.14086496627096265 NRMSE: 0.03773000301887308 MAPE: 180.62409051721556 Pearson Correlation: 0.41848157806276676 Spearman Correlation: 0.45219003024095217 Coefficient of Determination: 0.1520174726461473 RMSE: 0.376984740243967 NRMSE: 0.12415107533145628 MAPE: 2168.4488959617283 Predictor: RandomForests Pearson Correlation: 0.7166126929780235 Spearman Correlation: 0.6056458048846904 Coefficient of Determination: 0.4093596843081011 RMSE: 0.34992943797286785 NRMSE: 0.09372691521973159 MAPE: 301.344138783645 Pearson Correlation: 0.6188699098832664 Spearman Correlation: 0.49295982460263044 Coefficient of Determination: 0.31217475052120336 RMSE: 0.3395231381247343 NRMSE: 0.11181397600024182 MAPE: 1541.9809554965627 Protein: CTNNB1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.9999999999999996 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 2.8573018709917174e-15 NRMSE: 5.620184640030916e-16 MAPE: 5.484805084586686e-12 Pearson Correlation: 0.4440728255590166 Spearman Correlation: 0.4455906740805775 Coefficient of Determination: 0.13063833910737177 RMSE: 0.7147131575932112 NRMSE: 0.17787341220806133 MAPE: 244.34858883958915 Predictor: ElasticNet Pearson Correlation: 0.9861527112735526 Spearman Correlation: 0.9831498855561062 Coefficient of Determination: 0.9513532539610825 RMSE: 0.15990243321946002 NRMSE: 0.03145209150658144 MAPE: 168.8820281681873 Pearson Correlation: 0.5499006714305096 Spearman Correlation: 0.5735489220563849 Coefficient of Determination: 0.2651361121297853 RMSE: 0.6571053279438468 NRMSE: 0.1635363300922941 MAPE: 217.6861352721358 Predictor: RandomForests Pearson Correlation: 0.6885918181424854 Spearman Correlation: 0.6451471679313234 Coefficient of Determination: 0.46119938648426184 RMSE: 0.5321599850023414 NRMSE: 0.10467348249455968 MAPE: 390.5066352763301 Pearson Correlation: 0.5622990221039008 Spearman Correlation: 0.5459711247683153 Coefficient of Determination: 0.26908365708855764 RMSE: 0.6553380307563702 NRMSE: 0.16309649604449125 MAPE: 192.90031374294955 Protein: CCNE1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.972656392597368e-15 NRMSE: 4.760615856836566e-16 MAPE: 3.627789123350845e-13 Pearson Correlation: 0.7384488569108907 Spearman Correlation: 0.6341381328650864 Coefficient of Determination: 0.524042169396924 RMSE: 0.28856550008889 NRMSE: 0.1568299284718341 MAPE: 47.16367107994589 Predictor: ElasticNet Pearson Correlation: 0.9762571014524 Spearman Correlation: 0.9263145703936531 Coefficient of Determination: 0.9440009899548792 RMSE: 0.12134881862649867 NRMSE: 0.029285136140767592 MAPE: 31.286586838905944 Pearson Correlation: 0.7884178707557804 Spearman Correlation: 0.6880011706175008 Coefficient of Determination: 0.604485332319576 RMSE: 0.26305191385586923 NRMSE: 0.14296377363782917 MAPE: 44.67718062665268 Predictor: RandomForests Pearson Correlation: 0.8641325272835432 Spearman Correlation: 0.7121370770878523 Coefficient of Determination: 0.7411616065498257 RMSE: 0.2608913774075695 NRMSE: 0.06296097145246266 MAPE: 68.47827537667595 Pearson Correlation: 0.8370758789959319 Spearman Correlation: 0.7377382753433913 Coefficient of Determination: 0.6964144773855341 RMSE: 0.23046272752379282 NRMSE: 0.12525216306816497 MAPE: 43.29705743465634 Protein: CCND1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.0848411385226732e-15 NRMSE: 6.521751202478468e-16 MAPE: 3.797922562215629e-12 Pearson Correlation: 0.2566931422811107 Spearman Correlation: 0.34122524631743245 Coefficient of Determination: -0.056298600455000125 RMSE: 0.24196606086409728 NRMSE: 0.18719909394078207 MAPE: 430.89263656194464 Predictor: ElasticNet Pearson Correlation: 0.9053455326209972 Spearman Correlation: 0.8870297653306934 Coefficient of Determination: 0.7444556607923677 RMSE: 0.12068842237290663 NRMSE: 0.072554389374245 MAPE: 352.61431673114936 Pearson Correlation: 0.25915679961988475 Spearman Correlation: 0.2968149448834261 Coefficient of Determination: 0.030771630977230013 RMSE: 0.23177904058298385 NRMSE: 0.1793178193530543 MAPE: 493.8466122660528 Predictor: RandomForests Pearson Correlation: 0.6276768638651259 Spearman Correlation: 0.6313693178085551 Coefficient of Determination: 0.3356819849470679 RMSE: 0.1945899886439897 NRMSE: 0.11698187387670564 MAPE: 465.94959946465065 Pearson Correlation: 0.20903883047760832 Spearman Correlation: 0.32311481806653014 Coefficient of Determination: 0.016086650411912817 RMSE: 0.23352830584228812 NRMSE: 0.1806711532480412 MAPE: 312.2271936321523 Protein: ERBB2 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 3.515830111797034e-15 NRMSE: 6.309477436241828e-16 MAPE: 2.6470444461437657e-12 Pearson Correlation: 0.7134684391255428 Spearman Correlation: 0.5116573992781193 Coefficient of Determination: 0.5039962472753428 RMSE: 0.7445610144473627 NRMSE: 0.12684822298368958 MAPE: 2353.188222388117 Predictor: ElasticNet Pearson Correlation: 0.9907961767343516 Spearman Correlation: 0.9784388813106578 Coefficient of Determination: 0.9774350917711974 RMSE: 0.1476638400946411 NRMSE: 0.026499621358261595 MAPE: 90.0430507935466 Pearson Correlation: 0.8081239714409482 Spearman Correlation: 0.5986635450199982 Coefficient of Determination: 0.6349666135716114 RMSE: 0.6387399870551985 NRMSE: 0.1088198693383305 MAPE: 1418.9728877270766 Predictor: RandomForests Pearson Correlation: 0.8630571482931485 Spearman Correlation: 0.7280028734168138 Coefficient of Determination: 0.7400404355383813 RMSE: 0.5011990889497389 NRMSE: 0.08994474255688653 MAPE: 229.30069039285783 Pearson Correlation: 0.7848427517927571 Spearman Correlation: 0.5317735670457738 Coefficient of Determination: 0.5962680750804437 RMSE: 0.6717448687161763 NRMSE: 0.11444279413192776 MAPE: 1448.636433792071 Protein: ERBB3 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999997868954927 Coefficient of Determination: 1.0 RMSE: 1.9146647232858804e-15 NRMSE: 5.167130548313386e-16 MAPE: 1.3069124155226512e-12 Pearson Correlation: 0.2618388339583001 Spearman Correlation: 0.30032191981270123 Coefficient of Determination: -0.007958670323706674 RMSE: 0.5198318053852975 NRMSE: 0.1918488794929482 MAPE: 297.35263258496866 Predictor: ElasticNet Pearson Correlation: 0.9627295979224048 Spearman Correlation: 0.9545482715760174 Coefficient of Determination: 0.8862037862920525 RMSE: 0.15015982563428637 NRMSE: 0.040523827108109464 MAPE: 90.18227908764733 Pearson Correlation: 0.24761426064218603 Spearman Correlation: 0.31115013169446887 Coefficient of Determination: 0.0034859400941881225 RMSE: 0.5168722314443867 NRMSE: 0.1907566205383053 MAPE: 313.73225160390723 Predictor: RandomForests Pearson Correlation: 0.6395318642107709 Spearman Correlation: 0.6377192576809942 Coefficient of Determination: 0.34926959201704155 RMSE: 0.35907932480367455 NRMSE: 0.09690520360539272 MAPE: 189.29668342067956 Pearson Correlation: 0.42046129074666827 Spearman Correlation: 0.4585503853282607 Coefficient of Determination: 0.16419236643642188 RMSE: 0.4733633742387581 NRMSE: 0.17469926233812424 MAPE: 351.8738303577603 Fold: 3 Protein: RB1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.0399201686429473e-15 NRMSE: 3.803101845534477e-16 MAPE: 2.568864560738946e-12 Pearson Correlation: 0.091407056717623 Spearman Correlation: 0.11566977144353423 Coefficient of Determination: -0.28997064619940316 RMSE: 0.2517602603872795 NRMSE: 0.17665651121102452 MAPE: 427.95677620014584 Predictor: ElasticNet Pearson Correlation: 0.901547330330042 Spearman Correlation: 0.8226593837128553 Coefficient of Determination: 0.7255059506407661 RMSE: 0.12604570593354153 NRMSE: 0.04609629386100846 MAPE: 338.8054935329066 Pearson Correlation: 0.21347481784963337 Spearman Correlation: 0.21226449207596107 Coefficient of Determination: -0.009961395824149344 RMSE: 0.22276638233694793 NRMSE: 0.15631192888905504 MAPE: 329.198486098604 Predictor: RandomForests Pearson Correlation: 0.7190838136688136 Spearman Correlation: 0.5049382983862054 Coefficient of Determination: 0.23818587867265562 RMSE: 0.20998394821157518 NRMSE: 0.07679342752032445 MAPE: 237.98974903666954 Pearson Correlation: 0.20750478503074435 Spearman Correlation: 0.12944051671467227 Coefficient of Determination: 0.0077025831714929716 RMSE: 0.22080972432661242 NRMSE: 0.15493897043561503 MAPE: 204.83917026658435 Protein: CDH1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.675762440609646e-15 NRMSE: 7.445244483630531e-16 MAPE: 2.9640586529028294e-12 Pearson Correlation: 0.443512886520228 Spearman Correlation: 0.3363757652838565 Coefficient of Determination: -0.08289226798560367 RMSE: 0.9797862589109977 NRMSE: 0.1926210551077336 MAPE: 427.43235232929885 Predictor: ElasticNet Pearson Correlation: 0.9924227531175036 Spearman Correlation: 0.9872078363253446 Coefficient of Determination: 0.976514269277357 RMSE: 0.18002470912893034 NRMSE: 0.02866544204466901 MAPE: 140.17338275674706 Pearson Correlation: 0.5027277212144763 Spearman Correlation: 0.4363221486552201 Coefficient of Determination: 0.15394345527389475 RMSE: 0.8660409198677027 NRMSE: 0.1702592930184608 MAPE: 274.5590380902295 Predictor: RandomForests Pearson Correlation: 0.7837345615881911 Spearman Correlation: 0.7449934651870793 Coefficient of Determination: 0.6070337716784604 RMSE: 0.7363896800943848 NRMSE: 0.11725576893958548 MAPE: 205.84426263427665 Pearson Correlation: 0.7405486363944257 Spearman Correlation: 0.5268258377947225 Coefficient of Determination: 0.5349972152440792 RMSE: 0.6420465177478243 NRMSE: 0.12622311912629738 MAPE: 145.96416540368367 Protein: CDH2 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 1.6838453864326146e-15 NRMSE: 6.101331206727352e-16 MAPE: 2.2724848025503594e-11 Pearson Correlation: 0.010405673961690329 Spearman Correlation: 0.07144976870035787 Coefficient of Determination: -0.33553358235327346 RMSE: 0.3836518389143623 NRMSE: 0.20214757461713193 MAPE: 1093.689871922072 Predictor: ElasticNet Pearson Correlation: 0.9545609024949965 Spearman Correlation: 0.9422884210724247 Coefficient of Determination: 0.8527201332596361 RMSE: 0.14630791991845735 NRMSE: 0.053013957503607996 MAPE: 178.43491880372784 Pearson Correlation: 0.06832518276505356 Spearman Correlation: 0.06573897430142522 Coefficient of Determination: -0.1516880807085208 RMSE: 0.35626840856459135 NRMSE: 0.18771914376282556 MAPE: 3824.6674933722543 Predictor: RandomForests Pearson Correlation: 0.6533357144639287 Spearman Correlation: 0.5579302894468017 Coefficient of Determination: 0.25563810803056863 RMSE: 0.3289184311981145 NRMSE: 0.11918198101243369 MAPE: 239.83165670019866 Pearson Correlation: -0.012132698149530446 Spearman Correlation: 0.024571378695494955 Coefficient of Determination: -0.040794519182951516 RMSE: 0.33868220298083634 NRMSE: 0.17845290691763252 MAPE: 2446.618462774429 Protein: CDH3 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 7.69443829346976e-16 NRMSE: 5.398242053565247e-16 MAPE: 2.125443873344517e-12 Pearson Correlation: 0.2526292580581889 Spearman Correlation: 0.26149203855409675 Coefficient of Determination: -0.23290491022829873 RMSE: 0.2091126521796614 NRMSE: 0.18188928316791897 MAPE: 343.20026993555695 Predictor: ElasticNet Pearson Correlation: 0.8743039757418133 Spearman Correlation: 0.8442933984459601 Coefficient of Determination: 0.7037399045979673 RMSE: 0.11566910831691056 NRMSE: 0.08115080282659157 MAPE: 464.6990363940795 Pearson Correlation: 0.35273722330790036 Spearman Correlation: 0.3545206299330416 Coefficient of Determination: 0.08235981681953508 RMSE: 0.1804063128902081 NRMSE: 0.15692008392861265 MAPE: 277.12125084698926 Predictor: RandomForests Pearson Correlation: 0.6922720215742788 Spearman Correlation: 0.6876145924526464 Coefficient of Determination: 0.3790512678668764 RMSE: 0.1674590722485775 NRMSE: 0.11748545788332597 MAPE: 527.824937950049 Pearson Correlation: 0.3715719396290562 Spearman Correlation: 0.3801169590643275 Coefficient of Determination: 0.13446204950804252 RMSE: 0.17520987367151752 NRMSE: 0.1524001441035406 MAPE: 189.6566949592317 Protein: PTEN x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.765893917945729e-15 NRMSE: 4.3247500866949087e-16 MAPE: 3.938152326786096e-12 Pearson Correlation: 0.2740062516602651 Spearman Correlation: 0.25609047494357784 Coefficient of Determination: -0.122802088107133 RMSE: 0.499038629678687 NRMSE: 0.11931301814151174 MAPE: 166.19163763341248 Predictor: ElasticNet Pearson Correlation: 0.9793328229172267 Spearman Correlation: 0.9683937230702316 Coefficient of Determination: 0.9352884229592399 RMSE: 0.16008284824787833 NRMSE: 0.025030544640431293 MAPE: 144.07201223529972 Pearson Correlation: 0.3469386670221264 Spearman Correlation: 0.3623262135438098 Coefficient of Determination: -0.017720796340418232 RMSE: 0.4751129670609097 NRMSE: 0.11359273348178399 MAPE: 153.89999616457686 Predictor: RandomForests Pearson Correlation: 0.6921692689408475 Spearman Correlation: 0.5890255411345315 Coefficient of Determination: 0.34183842084571403 RMSE: 0.5105285971900505 NRMSE: 0.07982622112267226 MAPE: 205.12547155560577 Pearson Correlation: 0.3714452028244087 Spearman Correlation: 0.38045112781954893 Coefficient of Determination: 0.11899109939597885 RMSE: 0.4420513355870473 NRMSE: 0.1056881689827015 MAPE: 101.28787240773734 Protein: BRCA2 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 7.539198391691096e-16 NRMSE: 5.081281098651428e-16 MAPE: 1.7672383364420129e-12 Pearson Correlation: 0.1509670005727807 Spearman Correlation: 0.15890721829449247 Coefficient of Determination: -0.07592194662709173 RMSE: 0.2221113637845679 NRMSE: 0.1527704047655379 MAPE: 346.47805794849626 Predictor: ElasticNet Pearson Correlation: 0.8680779274155622 Spearman Correlation: 0.836369995316219 Coefficient of Determination: 0.6367883296940806 RMSE: 0.1145376085752284 NRMSE: 0.07719624226621492 MAPE: 157.82496943354067 Pearson Correlation: 0.1935743699606471 Spearman Correlation: 0.18953104153418374 Coefficient of Determination: 0.024735108535114625 RMSE: 0.21146655523347355 NRMSE: 0.14544879958832757 MAPE: 291.5671328496418 Predictor: RandomForests Pearson Correlation: 0.6732692644870317 Spearman Correlation: 0.6131176785088718 Coefficient of Determination: 0.29049909116062633 RMSE: 0.1600828074569737 NRMSE: 0.10789286890853646 MAPE: 171.82088954065395 Pearson Correlation: 0.19235813902609533 Spearman Correlation: 0.2360603000037407 Coefficient of Determination: 0.03688756181568775 RMSE: 0.21014491780057265 NRMSE: 0.14453976421914497 MAPE: 193.35746053961708 Protein: CDKN2A x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 2.8698479715984612e-15 NRMSE: 6.700242742805523e-16 MAPE: 3.0319078614928047e-12 Pearson Correlation: 0.4462217151035143 Spearman Correlation: 0.4228855721393035 Coefficient of Determination: 0.16438327031414013 RMSE: 0.600157940864568 NRMSE: 0.18528540053242196 MAPE: 201.0528132590036 Predictor: ElasticNet Pearson Correlation: 0.982985768526286 Spearman Correlation: 0.9832598544887503 Coefficient of Determination: 0.9468529109224042 RMSE: 0.15390343198512316 NRMSE: 0.03593188083328427 MAPE: 74.11285509185596 Pearson Correlation: 0.4708628605741979 Spearman Correlation: 0.4242122719734661 Coefficient of Determination: 0.1924378674905861 RMSE: 0.5899972218954703 NRMSE: 0.1821485047993178 MAPE: 201.76261732417743 Predictor: RandomForests Pearson Correlation: 0.6959471675064649 Spearman Correlation: 0.6831506028586596 Coefficient of Determination: 0.46917243831528865 RMSE: 0.48639073678717953 NRMSE: 0.11355779248860187 MAPE: 167.33088209238554 Pearson Correlation: 0.5983555095825299 Spearman Correlation: 0.5673312634820884 Coefficient of Determination: 0.3510428944071149 RMSE: 0.5288956432972198 NRMSE: 0.16328475295520972 MAPE: 102.4133874227958 Protein: TP53 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.8447612798820323e-15 NRMSE: 4.4334565726556897e-16 MAPE: 6.454733831766685e-12 Pearson Correlation: 0.40591382191424685 Spearman Correlation: 0.37264554420878065 Coefficient of Determination: 0.07740008471110471 RMSE: 0.4134545159674046 NRMSE: 0.15417684966099907 MAPE: 750.2699290759788 Predictor: ElasticNet Pearson Correlation: 0.9681459940900299 Spearman Correlation: 0.9403188539269379 Coefficient of Determination: 0.9071535393701594 RMSE: 0.13715260013570305 NRMSE: 0.03296145160675392 MAPE: 219.32415508053182 Pearson Correlation: 0.4754921392551109 Spearman Correlation: 0.41492537313432837 Coefficient of Determination: 0.21555351303986447 RMSE: 0.3812437176766852 NRMSE: 0.14216546941543773 MAPE: 487.54056727148924 Predictor: RandomForests Pearson Correlation: 0.7130466368578406 Spearman Correlation: 0.6048324458092654 Coefficient of Determination: 0.4142215822056411 RMSE: 0.3444990687770499 NRMSE: 0.08279237413531601 MAPE: 528.8938813324468 Pearson Correlation: 0.5195404512786586 Spearman Correlation: 0.4506963927231013 Coefficient of Determination: 0.23777281691925278 RMSE: 0.3758056032233582 NRMSE: 0.14013760099913047 MAPE: 387.0270382189291 Protein: CTNNB1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.9999999999999996 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.135030089454717e-15 NRMSE: 6.166463590587563e-16 MAPE: 2.5775045478448925e-12 Pearson Correlation: 0.3232434184342254 Spearman Correlation: 0.2882006010050001 Coefficient of Determination: -0.1331906491225716 RMSE: 0.6525157125312712 NRMSE: 0.21331711155358823 MAPE: 1519.4910577535873 Predictor: ElasticNet Pearson Correlation: 0.9870080638364827 Spearman Correlation: 0.9851856335673792 Coefficient of Determination: 0.9565350180756799 RMSE: 0.16036425906306778 NRMSE: 0.03154293057888824 MAPE: 77.96639145577706 Pearson Correlation: 0.4145074556419915 Spearman Correlation: 0.36299455105425255 Coefficient of Determination: 0.1071284706193758 RMSE: 0.5792072246848231 NRMSE: 0.18935147428318122 MAPE: 1601.6135342137134 Predictor: RandomForests Pearson Correlation: 0.7022402268749011 Spearman Correlation: 0.680477670198589 Coefficient of Determination: 0.48399888820066905 RMSE: 0.5525392693097956 NRMSE: 0.10868199632372062 MAPE: 217.3823160003602 Pearson Correlation: 0.442946143568317 Spearman Correlation: 0.2947941994289206 Coefficient of Determination: 0.172036441269816 RMSE: 0.5577570829813653 NRMSE: 0.18233910326632619 MAPE: 1238.1141170368478 Protein: CCNE1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.9999999999999993 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 2.044797429328906e-15 NRMSE: 4.934713973813031e-16 MAPE: 3.671338040897196e-13 Pearson Correlation: 0.6533939154027143 Spearman Correlation: 0.5139989276674273 Coefficient of Determination: 0.31823688795054805 RMSE: 0.3012847039741775 NRMSE: 0.13123870887928626 MAPE: 84.3577647419226 Predictor: ElasticNet Pearson Correlation: 0.9772393212898858 Spearman Correlation: 0.9253655645003737 Coefficient of Determination: 0.9467538364130493 RMSE: 0.12054978321827606 NRMSE: 0.029092304756202444 MAPE: 26.201498174012166 Pearson Correlation: 0.7237455115569933 Spearman Correlation: 0.5873414880484794 Coefficient of Determination: 0.500773115175918 RMSE: 0.2578156736995182 NRMSE: 0.1123037303216963 MAPE: 71.214730851517 Predictor: RandomForests Pearson Correlation: 0.8674260606968455 Spearman Correlation: 0.7287060296156829 Coefficient of Determination: 0.7474985918034576 RMSE: 0.26251503087587447 NRMSE: 0.0633528080883931 MAPE: 55.13945597222235 Pearson Correlation: 0.7799892957027376 Spearman Correlation: 0.6685783003293158 Coefficient of Determination: 0.5702824762224654 RMSE: 0.23919487267354797 NRMSE: 0.10419256552404407 MAPE: 81.98244777957217 Protein: CCND1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 9.841964451350896e-16 NRMSE: 5.916704411003172e-16 MAPE: 2.7957064687779135e-12 Pearson Correlation: 0.197009669897876 Spearman Correlation: 0.26000573573236574 Coefficient of Determination: -0.12698908671799902 RMSE: 0.2226590087207929 NRMSE: 0.21098519773037142 MAPE: 357.56530569754574 Predictor: ElasticNet Pearson Correlation: 0.9042663230694065 Spearman Correlation: 0.8877844602064199 Coefficient of Determination: 0.742703037952539 RMSE: 0.12410058948163331 NRMSE: 0.07460568556445955 MAPE: 350.5770338640126 Pearson Correlation: 0.28846054423713674 Spearman Correlation: 0.28271923590069703 Coefficient of Determination: 0.04381616965542412 RMSE: 0.2050931302557857 NRMSE: 0.19434028242898968 MAPE: 372.1052352411269 Predictor: RandomForests Pearson Correlation: 0.6250799540351633 Spearman Correlation: 0.5997011527030469 Coefficient of Determination: 0.30662482464465735 RMSE: 0.20372327987517788 NRMSE: 0.12247254444167913 MAPE: 470.82973985067076 Pearson Correlation: 0.35244956347365475 Spearman Correlation: 0.34403670868714076 Coefficient of Determination: 0.11496611072817042 RMSE: 0.19731512019887573 NRMSE: 0.18697006642365488 MAPE: 330.4961079978102 Protein: ERBB2 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 5.016738313645354e-15 NRMSE: 8.54683938471362e-16 MAPE: 7.274215654784252e-12 Pearson Correlation: 0.7659349610102811 Spearman Correlation: 0.6240659161165416 Coefficient of Determination: 0.5861417583023918 RMSE: 0.6861252741319152 NRMSE: 0.12376890001658042 MAPE: 275.10784844715215 Predictor: ElasticNet Pearson Correlation: 0.990512338890994 Spearman Correlation: 0.9782666139773357 Coefficient of Determination: 0.9762192833701816 RMSE: 0.15131622843282147 NRMSE: 0.02577920991410489 MAPE: 154.5245362103425 Pearson Correlation: 0.8426699471068444 Spearman Correlation: 0.7109873078065202 Coefficient of Determination: 0.7096206234195965 RMSE: 0.574725540551116 NRMSE: 0.10367370310828992 MAPE: 194.7892002889204 Predictor: RandomForests Pearson Correlation: 0.8562870840862309 Spearman Correlation: 0.7329594586633166 Coefficient of Determination: 0.7239155888205134 RMSE: 0.5155775300801652 NRMSE: 0.08783711775391675 MAPE: 489.7467168213241 Pearson Correlation: 0.8560790047588499 Spearman Correlation: 0.7171079866531669 Coefficient of Determination: 0.7264090154081625 RMSE: 0.5578642156093476 NRMSE: 0.10063211913005045 MAPE: 165.24429375847845 Protein: ERBB3 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999884408153 Coefficient of Determination: 1.0 RMSE: 2.047276022964026e-15 NRMSE: 7.423395674792597e-16 MAPE: 1.56669850878743e-12 Pearson Correlation: 0.2845803956761926 Spearman Correlation: 0.24157159066821285 Coefficient of Determination: -0.06103718220296672 RMSE: 0.50959634972882 NRMSE: 0.14168244935812052 MAPE: 192.79505095487798 Predictor: ElasticNet Pearson Correlation: 0.9634391740327782 Spearman Correlation: 0.95985001725787 Coefficient of Determination: 0.8873172662471828 RMSE: 0.15139427540122732 NRMSE: 0.05489536323366487 MAPE: 88.24639653606195 Pearson Correlation: 0.16724834574075012 Spearman Correlation: 0.19041384555917157 Coefficient of Determination: -0.11140760942263017 RMSE: 0.5215520896540145 NRMSE: 0.1450064890954374 MAPE: 195.90597709485752 Predictor: RandomForests Pearson Correlation: 0.642252627933718 Spearman Correlation: 0.6685595860208804 Coefficient of Determination: 0.3569915491197295 RMSE: 0.36165053070967246 NRMSE: 0.1311340022226111 MAPE: 214.5454878946863 Pearson Correlation: 0.3497692727042196 Spearman Correlation: 0.3866307559944638 Coefficient of Determination: 0.09972825431638377 RMSE: 0.4694051142616876 NRMSE: 0.1305081293561375 MAPE: 156.4024458017193 Fold: 4 Protein: RB1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.096114494555457e-15 NRMSE: 4.008610644219781e-16 MAPE: 7.368810715622889e-12 Pearson Correlation: 0.0929867438807712 Spearman Correlation: 0.07408321799523686 Coefficient of Determination: -0.6565539497335608 RMSE: 0.21221543032373577 NRMSE: 0.20332601686633942 MAPE: 231.45475641572153 Predictor: ElasticNet Pearson Correlation: 0.9072462126099151 Spearman Correlation: 0.820771846019801 Coefficient of Determination: 0.7369646343236773 RMSE: 0.1289922972131019 NRMSE: 0.04717389453375582 MAPE: 259.8440416776048 Pearson Correlation: 0.11727862338363988 Spearman Correlation: 0.09137520417960325 Coefficient of Determination: -0.1633288848857648 RMSE: 0.17783835077065685 NRMSE: 0.17038894604937804 MAPE: 181.82532859105933 Predictor: RandomForests Pearson Correlation: 0.7239778351077377 Spearman Correlation: 0.50975458349582 Coefficient of Determination: 0.2502364334027919 RMSE: 0.21778044026154098 NRMSE: 0.07964468997276952 MAPE: 188.32355576431425 Pearson Correlation: 0.14673914002605512 Spearman Correlation: 0.08968939762341178 Coefficient of Determination: -0.06915454062047077 RMSE: 0.17048823266407265 NRMSE: 0.1633467143142535 MAPE: 108.97074100490815 Protein: CDH1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.3167699947499225e-15 NRMSE: 6.873618666204774e-16 MAPE: 3.994673688844766e-12 Pearson Correlation: 0.45573031835014205 Spearman Correlation: 0.43261636678761584 Coefficient of Determination: 0.16830656860395998 RMSE: 1.0637674367403103 NRMSE: 0.1929841872102446 MAPE: 501.28989424726564 Predictor: ElasticNet Pearson Correlation: 0.991316898944048 Spearman Correlation: 0.9851530757697963 Coefficient of Determination: 0.9731739090704808 RMSE: 0.18327919546087276 NRMSE: 0.029183655848678824 MAPE: 101.90969156075936 Pearson Correlation: 0.4859144003558015 Spearman Correlation: 0.4516190974949813 Coefficient of Determination: 0.21969193032261558 RMSE: 1.0303816251074716 NRMSE: 0.18692747453058153 MAPE: 312.9787452551282 Predictor: RandomForests Pearson Correlation: 0.7712858597798808 Spearman Correlation: 0.7447591883875451 Coefficient of Determination: 0.5872165296750176 RMSE: 0.7189449252551381 NRMSE: 0.11447803019890099 MAPE: 179.5956967420924 Pearson Correlation: 0.7750038686277781 Spearman Correlation: 0.5348359327088856 Coefficient of Determination: 0.5330402028511707 RMSE: 0.7970853038504072 NRMSE: 0.14460384308450477 MAPE: 160.4511692241509 Protein: CDH2 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999036734615 Coefficient of Determination: 1.0 RMSE: 1.6555669365565582e-15 NRMSE: 5.998865629960715e-16 MAPE: 2.713058176422601e-11 Pearson Correlation: 0.1563100557980862 Spearman Correlation: 0.153645307298096 Coefficient of Determination: -0.1715445218559455 RMSE: 0.3607212710718738 NRMSE: 0.18608459776313077 MAPE: 265.5620808458584 Predictor: ElasticNet Pearson Correlation: 0.9577030138155199 Spearman Correlation: 0.9462043806884359 Coefficient of Determination: 0.851700090739046 RMSE: 0.14609186267509208 NRMSE: 0.05293567022070153 MAPE: 1267.4445347918859 Pearson Correlation: 0.13592854742276742 Spearman Correlation: 0.09484158156585494 Coefficient of Determination: -0.07772108838360015 RMSE: 0.345975658287085 NRMSE: 0.17847780647057743 MAPE: 347.2681730301803 Predictor: RandomForests Pearson Correlation: 0.6559787045436668 Spearman Correlation: 0.5984147001394239 Coefficient of Determination: 0.23541535829508964 RMSE: 0.33171748862550604 NRMSE: 0.12019620574878834 MAPE: 849.3570403836886 Pearson Correlation: 0.19797218301773578 Spearman Correlation: 0.15441838426913054 Coefficient of Determination: 0.0028243817672775062 RMSE: 0.33279606258104766 NRMSE: 0.17167887343746008 MAPE: 130.0314648133941 Protein: CDH3 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 8.20332156909437e-16 NRMSE: 5.846402760305009e-16 MAPE: 3.75773137126104e-12 Pearson Correlation: 0.2578557472870642 Spearman Correlation: 0.30424568884898817 Coefficient of Determination: -0.10967773650285872 RMSE: 0.2188950927614867 NRMSE: 0.19482625697481767 MAPE: 2325.9190600948923 Predictor: ElasticNet Pearson Correlation: 0.8631824092822625 Spearman Correlation: 0.8194860724927325 Coefficient of Determination: 0.6766229583339343 RMSE: 0.11709333892681881 NRMSE: 0.08345093071740439 MAPE: 315.6412848151834 Pearson Correlation: 0.48817199139447465 Spearman Correlation: 0.4627713562513249 Coefficient of Determination: 0.20289856050208777 RMSE: 0.18552155929259137 NRMSE: 0.16512234481424012 MAPE: 730.8484072291482 Predictor: RandomForests Pearson Correlation: 0.6798361705533799 Spearman Correlation: 0.6468504227656139 Coefficient of Determination: 0.353434720425681 RMSE: 0.16557081554193875 NRMSE: 0.11800021062897412 MAPE: 386.07852563990997 Pearson Correlation: 0.4413241193635634 Spearman Correlation: 0.3830795895210664 Coefficient of Determination: 0.12685657992574462 RMSE: 0.19416921816995694 NRMSE: 0.17281914143684862 MAPE: 513.3743934560993 Protein: PTEN x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.3586349913854735e-15 NRMSE: 8.431280933506409e-16 MAPE: 7.335807312422323e-12 Pearson Correlation: 0.23714756413980506 Spearman Correlation: 0.2091921345652689 Coefficient of Determination: 0.006895400554721487 RMSE: 0.7429964188000815 NRMSE: 0.1161748758971279 MAPE: 1633.1981280723444 Predictor: ElasticNet Pearson Correlation: 0.9732448410253348 Spearman Correlation: 0.9587404172919382 Coefficient of Determination: 0.9176311298867351 RMSE: 0.1612311034861753 NRMSE: 0.031188313116329178 MAPE: 144.7784116844372 Pearson Correlation: 0.25982463639442704 Spearman Correlation: 0.2950735046571653 Coefficient of Determination: 0.04227282897695772 RMSE: 0.7296425091934621 NRMSE: 0.11408685938448317 MAPE: 611.4791251429192 Predictor: RandomForests Pearson Correlation: 0.6762444972597114 Spearman Correlation: 0.5795569511172509 Coefficient of Determination: 0.31460304294006236 RMSE: 0.46509145245213235 NRMSE: 0.08996662265013393 MAPE: 152.8060760259818 Pearson Correlation: 0.3792144537054553 Spearman Correlation: 0.3995635855808676 Coefficient of Determination: 0.11081404312086451 RMSE: 0.7030488811606967 NRMSE: 0.10992868128538766 MAPE: 179.71420699884527 Protein: BRCA2 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999229387699 Coefficient of Determination: 1.0 RMSE: 9.323787422718656e-16 NRMSE: 6.006627426457501e-16 MAPE: 1.9788636968550028e-12 Pearson Correlation: 0.3613231329890736 Spearman Correlation: 0.3289741767353708 Coefficient of Determination: 0.09553250611820918 RMSE: 0.19791739969025438 NRMSE: 0.19228162525405795 MAPE: 473.3401316196198 Predictor: ElasticNet Pearson Correlation: 0.8631493064026331 Spearman Correlation: 0.8058953923817365 Coefficient of Determination: 0.6232614534527553 RMSE: 0.11772330449848134 NRMSE: 0.07584042808728063 MAPE: 135.3601089761655 Pearson Correlation: 0.4012985824436945 Spearman Correlation: 0.3971944787341488 Coefficient of Determination: 0.14522307563594072 RMSE: 0.19240390826352088 NRMSE: 0.18692513262624563 MAPE: 305.0247049304934 Predictor: RandomForests Pearson Correlation: 0.6667284264766727 Spearman Correlation: 0.5552096918987891 Coefficient of Determination: 0.26648856353060535 RMSE: 0.16426531091674407 NRMSE: 0.10582400445594722 MAPE: 138.14573437669802 Pearson Correlation: 0.4106893594520277 Spearman Correlation: 0.43524981608249486 Coefficient of Determination: 0.10849938571692186 RMSE: 0.1964935586883205 NRMSE: 0.19089832867486034 MAPE: 247.26242097824107 Protein: CDKN2A x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 5.949118516421585e-15 NRMSE: 1.344889457764572e-15 MAPE: 4.6419154524713324e-12 Pearson Correlation: 0.43688158565468577 Spearman Correlation: 0.36891981196773027 Coefficient of Determination: 0.13931766486712183 RMSE: 0.5850962584743286 NRMSE: 0.17628691126071966 MAPE: 271.4072716315552 Predictor: ElasticNet Pearson Correlation: 0.9818833787147111 Spearman Correlation: 0.981234569813495 Coefficient of Determination: 0.9443777220028206 RMSE: 0.15894808398687293 NRMSE: 0.035932651517321786 MAPE: 92.89512864807494 Pearson Correlation: 0.5280009928701251 Spearman Correlation: 0.37232633823364386 Coefficient of Determination: 0.2726582169818432 RMSE: 0.5378673034065152 NRMSE: 0.16205703627794976 MAPE: 247.95525514593996 Predictor: RandomForests Pearson Correlation: 0.7036205879533608 Spearman Correlation: 0.661668719320961 Coefficient of Determination: 0.4815015417460379 RMSE: 0.48529369190665494 NRMSE: 0.10970808000602575 MAPE: 157.85916532993684 Pearson Correlation: 0.5905805031404355 Spearman Correlation: 0.4755146572899912 Coefficient of Determination: 0.33067472786454766 RMSE: 0.5159700434760162 NRMSE: 0.15545948884483765 MAPE: 132.92586231253856 Protein: TP53 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 2.363925057109276e-15 NRMSE: 5.681146496297227e-16 MAPE: 6.337014231004114e-12 Pearson Correlation: 0.41878648836188426 Spearman Correlation: 0.4054240077806457 Coefficient of Determination: 0.14971367592775564 RMSE: 0.39817836446002625 NRMSE: 0.12635769372303446 MAPE: 330.63804976703994 Predictor: ElasticNet Pearson Correlation: 0.9647599600414476 Spearman Correlation: 0.9370512833035272 Coefficient of Determination: 0.8982599478959497 RMSE: 0.1435732328515189 NRMSE: 0.034504502007094186 MAPE: 379.21437890292 Pearson Correlation: 0.46984308502659533 Spearman Correlation: 0.43165376126884386 Coefficient of Determination: 0.22045744594780015 RMSE: 0.38125449718136994 NRMSE: 0.12098708339088916 MAPE: 265.4960760461818 Predictor: RandomForests Pearson Correlation: 0.7063362691201494 Spearman Correlation: 0.6152950909757998 Coefficient of Determination: 0.4042681504490381 RMSE: 0.34741847640298934 NRMSE: 0.08349398615789218 MAPE: 642.124957243116 Pearson Correlation: 0.5767070153798161 Spearman Correlation: 0.44488584645693846 Coefficient of Determination: 0.2739544066838331 RMSE: 0.36794000363604784 NRMSE: 0.11676186964840309 MAPE: 219.81632189112082 Protein: CTNNB1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 3.109623535994692e-15 NRMSE: 7.510442314739379e-16 MAPE: 3.658664090424347e-12 Pearson Correlation: 0.4139988401228892 Spearman Correlation: 0.37716430379431165 Coefficient of Determination: 0.14091106117483088 RMSE: 0.7437711922848665 NRMSE: 0.1563727172409525 MAPE: 335.04101311399484 Predictor: ElasticNet Pearson Correlation: 0.9854762376895142 Spearman Correlation: 0.9826055269278449 Coefficient of Determination: 0.9495537830379428 RMSE: 0.15978814029496358 NRMSE: 0.03859244041516848 MAPE: 162.67541773854 Pearson Correlation: 0.4382957857063018 Spearman Correlation: 0.36893976234117637 Coefficient of Determination: 0.16930928984447347 RMSE: 0.7313747563506424 NRMSE: 0.15376645285313312 MAPE: 288.55228373732683 Predictor: RandomForests Pearson Correlation: 0.6662316009628374 Spearman Correlation: 0.6646011816376582 Coefficient of Determination: 0.4258756131117507 RMSE: 0.539055197537045 NRMSE: 0.13019399032389264 MAPE: 471.13093804188645 Pearson Correlation: 0.6651432884345201 Spearman Correlation: 0.4338333395678251 Coefficient of Determination: 0.3003922355819012 RMSE: 0.6711932804670168 NRMSE: 0.14111371635417894 MAPE: 487.0076005545733 Protein: CCNE1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.7821913331015996e-15 NRMSE: 4.300966124723314e-16 MAPE: 3.6071500962258933e-13 Pearson Correlation: 0.7864651336036788 Spearman Correlation: 0.6007631017843116 Coefficient of Determination: 0.6081404310860311 RMSE: 0.2830037850715234 NRMSE: 0.11548346734331325 MAPE: 72.59758904475207 Predictor: ElasticNet Pearson Correlation: 0.9752350531684183 Spearman Correlation: 0.919674074164264 Coefficient of Determination: 0.9415214811088333 RMSE: 0.12207346374697789 NRMSE: 0.02946001490141127 MAPE: 28.404922220035033 Pearson Correlation: 0.8278270535591843 Spearman Correlation: 0.6805097320415467 Coefficient of Determination: 0.6751395201781392 RMSE: 0.25767688195497557 NRMSE: 0.10514848688279425 MAPE: 68.44051927841139 Predictor: RandomForests Pearson Correlation: 0.8650661538165267 Spearman Correlation: 0.7178242895536465 Coefficient of Determination: 0.7418846586170353 RMSE: 0.25646611574039563 NRMSE: 0.061893022115596115 MAPE: 54.4303038276576 Pearson Correlation: 0.8322408126456691 Spearman Correlation: 0.7080792013869017 Coefficient of Determination: 0.6864632464486677 RMSE: 0.25314610206019594 NRMSE: 0.10329964174495877 MAPE: 76.87022438501224 Protein: CCND1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.5742266449687072e-15 NRMSE: 1.005754235806281e-15 MAPE: 4.784409641552254e-12 Pearson Correlation: 0.33781684382045307 Spearman Correlation: 0.26903826731006625 Coefficient of Determination: 0.010459643624413428 RMSE: 0.2278010640782503 NRMSE: 0.1436686831976856 MAPE: 519.905790361026 Predictor: ElasticNet Pearson Correlation: 0.9031487883192594 Spearman Correlation: 0.8858157599379408 Coefficient of Determination: 0.7278461140589041 RMSE: 0.12536432668627348 NRMSE: 0.08009374189332712 MAPE: 398.9314877555438 Pearson Correlation: 0.45104314382573824 Spearman Correlation: 0.33362760134166264 Coefficient of Determination: 0.19970569795014337 RMSE: 0.2048631543517439 NRMSE: 0.1292022920987285 MAPE: 383.3432240965666 Predictor: RandomForests Pearson Correlation: 0.6541894203639995 Spearman Correlation: 0.5972897412357207 Coefficient of Determination: 0.2911468226611039 RMSE: 0.2023228098241928 NRMSE: 0.1292615797294903 MAPE: 459.2283388216504 Pearson Correlation: 0.5173128206142625 Spearman Correlation: 0.47551964488335274 Coefficient of Determination: 0.18838411527076904 RMSE: 0.2063071417257879 NRMSE: 0.1301129804022376 MAPE: 525.4653959032952 Protein: ERBB2 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.4644304955526926e-15 NRMSE: 5.902227533864921e-16 MAPE: 3.80593260046691e-12 Pearson Correlation: 0.7585215008295152 Spearman Correlation: 0.5943148846185802 Coefficient of Determination: 0.5717766556867048 RMSE: 0.6783815720410976 NRMSE: 0.12215607952625376 MAPE: 289.43101702477924 Predictor: ElasticNet Pearson Correlation: 0.9902448182240925 Spearman Correlation: 0.9777757724733288 Coefficient of Determination: 0.9759594951151342 RMSE: 0.15207691937213882 NRMSE: 0.025908806135260545 MAPE: 151.30257599541443 Pearson Correlation: 0.8010532973028798 Spearman Correlation: 0.6595028111363263 Coefficient of Determination: 0.635554847795762 RMSE: 0.6258279589030633 NRMSE: 0.11269275739241966 MAPE: 231.7526946438011 Predictor: RandomForests Pearson Correlation: 0.8709146658164267 Spearman Correlation: 0.7286925293447761 Coefficient of Determination: 0.7486633922466936 RMSE: 0.4917217164096209 NRMSE: 0.08377288727015365 MAPE: 330.8069919029942 Pearson Correlation: 0.7901556047608845 Spearman Correlation: 0.6631046848581275 Coefficient of Determination: 0.5852960565983836 RMSE: 0.6675871291981509 NRMSE: 0.1202123256380147 MAPE: 180.52758767456177 Protein: ERBB3 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999036734615 Coefficient of Determination: 1.0 RMSE: 1.9569977915795654e-15 NRMSE: 5.351096857367447e-16 MAPE: 1.3015818653200484e-12 Pearson Correlation: 0.23828127738292487 Spearman Correlation: 0.3112781954887218 Coefficient of Determination: -0.31840487861447 RMSE: 0.4415826686880528 NRMSE: 0.21734960337458975 MAPE: 312.75040866109265 Predictor: ElasticNet Pearson Correlation: 0.9658573137973601 Spearman Correlation: 0.9580585177198403 Coefficient of Determination: 0.8946207712069859 RMSE: 0.1550769148890883 NRMSE: 0.0424032973099807 MAPE: 98.32871718698382 Pearson Correlation: 0.30592330494759135 Spearman Correlation: 0.3304305539969326 Coefficient of Determination: -0.01150720115132331 RMSE: 0.3867872134301028 NRMSE: 0.19037895594762083 MAPE: 203.88687963299645 Predictor: RandomForests Pearson Correlation: 0.6406141074446104 Spearman Correlation: 0.6510239164939807 Coefficient of Determination: 0.3537892043277857 RMSE: 0.3840225694800712 NRMSE: 0.10500481776447797 MAPE: 219.28854017883793 Pearson Correlation: 0.3953392717229648 Spearman Correlation: 0.313592438808464 Coefficient of Determination: 0.14243097909042235 RMSE: 0.35614115358958714 NRMSE: 0.17529478389186587 MAPE: 231.81024404876845 Fold: 5 Protein: RB1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.0601186332558495e-15 NRMSE: 5.237145152753637e-16 MAPE: 2.1209584982804884e-12 Pearson Correlation: 0.04186801712599941 Spearman Correlation: 0.16880260352373472 Coefficient of Determination: -0.24259977684809275 RMSE: 0.2679446077170166 NRMSE: 0.1350990297667631 MAPE: 424.60169984490034 Predictor: ElasticNet Pearson Correlation: 0.8886403555150444 Spearman Correlation: 0.8046232806050876 Coefficient of Determination: 0.6975587824304395 RMSE: 0.128635284891039 NRMSE: 0.06354776131716208 MAPE: 179.15408670067993 Pearson Correlation: 0.22801745065198925 Spearman Correlation: 0.31293906407810573 Coefficient of Determination: -0.02731348398045208 RMSE: 0.24363006442387125 NRMSE: 0.12283951375666623 MAPE: 307.60866169428994 Predictor: RandomForests Pearson Correlation: 0.6743666445077651 Spearman Correlation: 0.4789545918084996 Coefficient of Determination: 0.26967997664056975 RMSE: 0.19989237488007183 NRMSE: 0.09874983321068842 MAPE: 158.5153714282499 Pearson Correlation: -0.007999753491142538 Spearman Correlation: 0.04874624371874961 Coefficient of Determination: -0.1533946267262365 RMSE: 0.25814775215388774 NRMSE: 0.1301594055189721 MAPE: 255.68143790431472 Protein: CDH1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.317445273111277e-15 NRMSE: 6.874693915976046e-16 MAPE: 1.848451196404897e-12 Pearson Correlation: 0.47390155492598884 Spearman Correlation: 0.46893103405279374 Coefficient of Determination: 0.15872056214162922 RMSE: 1.0655700105738461 NRMSE: 0.2095475036034387 MAPE: 1578.4484367476953 Predictor: ElasticNet Pearson Correlation: 0.9917198640223083 Spearman Correlation: 0.9841013441443042 Coefficient of Determination: 0.973530564167349 RMSE: 0.18320562653502886 NRMSE: 0.02917194142464075 MAPE: 68.61719369446313 Pearson Correlation: 0.48111168312860236 Spearman Correlation: 0.48798862828713585 Coefficient of Determination: 0.20749286831512037 RMSE: 1.0342212135907156 NRMSE: 0.20338266968018637 MAPE: 1278.8240685279115 Predictor: RandomForests Pearson Correlation: 0.8034107043081723 Spearman Correlation: 0.7261677873726136 Coefficient of Determination: 0.6380518726094138 RMSE: 0.6774693192913301 NRMSE: 0.10787384466917138 MAPE: 134.92885322390424 Pearson Correlation: 0.6573993999019327 Spearman Correlation: 0.6479207970174192 Coefficient of Determination: 0.423576343257265 RMSE: 0.8820287679921058 NRMSE: 0.17345357377280798 MAPE: 427.4031911262092 Protein: CDH2 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 2.393022981179727e-15 NRMSE: 1.1752973730070856e-15 MAPE: 6.678623015054631e-12 Pearson Correlation: 0.24453609819510208 Spearman Correlation: 0.22116263440039438 Coefficient of Determination: -0.03756798416640095 RMSE: 0.4248539863542798 NRMSE: 0.1588744035877867 MAPE: 1026.7062008426863 Predictor: ElasticNet Pearson Correlation: 0.9546666719940381 Spearman Correlation: 0.9402157437017479 Coefficient of Determination: 0.8372713460062048 RMSE: 0.14487433287723822 NRMSE: 0.0711528573632131 MAPE: 385.77738859126913 Pearson Correlation: 0.27009661935991175 Spearman Correlation: 0.28565728457644446 Coefficient of Determination: 0.020027343356802563 RMSE: 0.41289383214379144 NRMSE: 0.1544018967312198 MAPE: 3203.9914302708125 Predictor: RandomForests Pearson Correlation: 0.7033984745808509 Spearman Correlation: 0.6041444762433332 Coefficient of Determination: 0.2469054575163777 RMSE: 0.3116622367523235 NRMSE: 0.15306823670366065 MAPE: 602.7592708405957 Pearson Correlation: 0.14399892969844244 Spearman Correlation: 0.157832588726402 Coefficient of Determination: 0.0017031687890860514 RMSE: 0.4167362338857929 NRMSE: 0.15583876517240727 MAPE: 538.4337711070573 Protein: CDH3 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.1119797957585898e-15 NRMSE: 7.801396108762627e-16 MAPE: 4.692213701921431e-12 Pearson Correlation: 0.40671798804163717 Spearman Correlation: 0.4000473821369344 Coefficient of Determination: 0.11518983020546159 RMSE: 0.21013236417630676 NRMSE: 0.18958341754825175 MAPE: 319.9329676341086 Predictor: ElasticNet Pearson Correlation: 0.872861684368192 Spearman Correlation: 0.8380087632873063 Coefficient of Determination: 0.6939609073483055 RMSE: 0.11272597138054456 NRMSE: 0.07908596521618719 MAPE: 487.85244951916724 Pearson Correlation: 0.5356706431444521 Spearman Correlation: 0.5147370914849313 Coefficient of Determination: 0.2665667486064828 RMSE: 0.1913146341805753 NRMSE: 0.17260588256892906 MAPE: 227.72768965507387 Predictor: RandomForests Pearson Correlation: 0.6921744766607956 Spearman Correlation: 0.6682264629915282 Coefficient of Determination: 0.358468268456388 RMSE: 0.16320918824554878 NRMSE: 0.11450383639610259 MAPE: 459.31332452955854 Pearson Correlation: 0.514818707146539 Spearman Correlation: 0.529884412523847 Coefficient of Determination: 0.20357736530327175 RMSE: 0.1993607648243169 NRMSE: 0.1798651781632069 MAPE: 150.23561511847365 Protein: PTEN x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.7147865119268163e-15 NRMSE: 4.2448385770101107e-16 MAPE: 2.088538071717292e-12 Pearson Correlation: 0.4342062992087335 Spearman Correlation: 0.46744473123106284 Coefficient of Determination: 0.1739484753751258 RMSE: 0.6559383215008237 NRMSE: 0.12688376692603368 MAPE: 757.0041347360567 Predictor: ElasticNet Pearson Correlation: 0.9759300466747023 Spearman Correlation: 0.9612787370466339 Coefficient of Determination: 0.92431727788918 RMSE: 0.15654229091394833 NRMSE: 0.024476943306066503 MAPE: 151.4440052516975 Pearson Correlation: 0.5193882365991207 Spearman Correlation: 0.5403583585830248 Coefficient of Determination: 0.2529955517470095 RMSE: 0.6237650389789174 NRMSE: 0.12066021335865781 MAPE: 726.5066603140731 Predictor: RandomForests Pearson Correlation: 0.6307954192700198 Spearman Correlation: 0.583672650493699 Coefficient of Determination: 0.3191364840931121 RMSE: 0.4695299984209757 NRMSE: 0.07341568265514435 MAPE: 245.45405268213 Pearson Correlation: 0.44483438631461164 Spearman Correlation: 0.4611782015962743 Coefficient of Determination: 0.15764312063047725 RMSE: 0.6623804397232012 NRMSE: 0.12812992102352236 MAPE: 383.77307345579726 Protein: BRCA2 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999884408153 Coefficient of Determination: 1.0 RMSE: 1.4226355550802277e-15 NRMSE: 9.164989886166713e-16 MAPE: 5.974713281849829e-12 Pearson Correlation: 0.16526878410142734 Spearman Correlation: 0.14195438845870897 Coefficient of Determination: -0.34562257930798124 RMSE: 0.19266317990998433 NRMSE: 0.2519625709932444 MAPE: 357.73449702767965 Predictor: ElasticNet Pearson Correlation: 0.8725389043857017 Spearman Correlation: 0.8238632523710063 Coefficient of Determination: 0.6545057274825683 RMSE: 0.11783272432090945 NRMSE: 0.07591091919530324 MAPE: 164.418993243556 Pearson Correlation: 0.16011120870508938 Spearman Correlation: 0.17498721929201114 Coefficient of Determination: -0.1039606271825233 RMSE: 0.17450741421972887 NRMSE: 0.22821868072939105 MAPE: 240.01073396985961 Predictor: RandomForests Pearson Correlation: 0.655833430807083 Spearman Correlation: 0.5748461106385155 Coefficient of Determination: 0.2829902540415049 RMSE: 0.16974931175751812 NRMSE: 0.10935694105815309 MAPE: 191.27047885990635 Pearson Correlation: 0.24377566499510217 Spearman Correlation: 0.21355627875659297 Coefficient of Determination: -0.022130650308200606 RMSE: 0.16791531049952496 NRMSE: 0.21959760740145812 MAPE: 176.44436442770746 Protein: CDKN2A x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.4634020197077107e-15 NRMSE: 8.819235618414889e-16 MAPE: 3.7446032941918555e-12 Pearson Correlation: 0.40754427210685196 Spearman Correlation: 0.41129440516714677 Coefficient of Determination: 0.08599589445456524 RMSE: 0.5793092854613514 NRMSE: 0.14577118981941858 MAPE: 417.57761242868827 Predictor: ElasticNet Pearson Correlation: 0.9812302099137282 Spearman Correlation: 0.9799487458073395 Coefficient of Determination: 0.9457043498075267 RMSE: 0.158376878849411 NRMSE: 0.040329219742153505 MAPE: 105.91850156466911 Pearson Correlation: 0.3716505977291318 Spearman Correlation: 0.3861569346251201 Coefficient of Determination: 0.06344847643744 RMSE: 0.5864111964063031 NRMSE: 0.14755823869713977 MAPE: 385.6724386477917 Predictor: RandomForests Pearson Correlation: 0.7203864789308992 Spearman Correlation: 0.6864878330796599 Coefficient of Determination: 0.5120451231027796 RMSE: 0.4747872987206711 NRMSE: 0.12090023139738512 MAPE: 132.8922586145708 Pearson Correlation: 0.3807872124876807 Spearman Correlation: 0.39112956520654873 Coefficient of Determination: -0.04770734805005028 RMSE: 0.6202352019043322 NRMSE: 0.1560693495141874 MAPE: 466.2645130056909 Protein: TP53 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.5100858883604974e-15 NRMSE: 6.383900629111873e-16 MAPE: 6.587812665564695e-12 Pearson Correlation: 0.44434761680889096 Spearman Correlation: 0.384251673961022 Coefficient of Determination: 0.18365531880142638 RMSE: 0.47718920060271186 NRMSE: 0.1278128299458181 MAPE: 218.0976526053056 Predictor: ElasticNet Pearson Correlation: 0.9622970835465937 Spearman Correlation: 0.9323983468979715 Coefficient of Determination: 0.8926128374720415 RMSE: 0.1388768621699162 NRMSE: 0.03532054786996521 MAPE: 332.48561620622087 Pearson Correlation: 0.49453224749840935 Spearman Correlation: 0.47512562500779315 Coefficient of Determination: 0.244454682711446 RMSE: 0.45907546400864385 NRMSE: 0.12296115280799354 MAPE: 203.72035622566696 Predictor: RandomForests Pearson Correlation: 0.6893528212959577 Spearman Correlation: 0.6137045650127729 Coefficient of Determination: 0.40213785106608646 RMSE: 0.32768324906978163 NRMSE: 0.08333967015177945 MAPE: 747.1192271141979 Pearson Correlation: 0.5172033319900466 Spearman Correlation: 0.4281724211025076 Coefficient of Determination: 0.22153800899554033 RMSE: 0.4659856352292026 NRMSE: 0.12481200890028195 MAPE: 148.89826624338417 Protein: CTNNB1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 3.015158554419576e-15 NRMSE: 5.930681657001526e-16 MAPE: 2.412162656171565e-12 Pearson Correlation: 0.49656539964490737 Spearman Correlation: 0.45772889936283495 Coefficient of Determination: 0.1490396641359758 RMSE: 0.6251223930583794 NRMSE: 0.20020637814570869 MAPE: 229.8288569081643 Predictor: ElasticNet Pearson Correlation: 0.9863458856684469 Spearman Correlation: 0.9838253291598271 Coefficient of Determination: 0.9533205665694549 RMSE: 0.16333285387780908 NRMSE: 0.032126839865816104 MAPE: 177.24560199826874 Pearson Correlation: 0.5031916139347858 Spearman Correlation: 0.4891108367934762 Coefficient of Determination: 0.21878100664281197 RMSE: 0.5989585853178365 NRMSE: 0.19182696117968495 MAPE: 214.53200884442487 Predictor: RandomForests Pearson Correlation: 0.6762127152430822 Spearman Correlation: 0.6756610866307926 Coefficient of Determination: 0.4412556228041862 RMSE: 0.5650896399367948 NRMSE: 0.11115059794193448 MAPE: 478.8035560987595 Pearson Correlation: 0.655746427453171 Spearman Correlation: 0.611087420042644 Coefficient of Determination: 0.42553080119907727 RMSE: 0.5136221822108481 NRMSE: 0.16449648577238848 MAPE: 187.98891324330157 Protein: CCNE1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 1.8124068828010167e-15 NRMSE: 6.4555899654533095e-16 MAPE: 4.257281008276153e-13 Pearson Correlation: 0.62338189393713 Spearman Correlation: 0.6028977917430393 Coefficient of Determination: 0.372269441766616 RMSE: 0.5134829705267534 NRMSE: 0.12391895420198214 MAPE: 101.55668092589131 Predictor: ElasticNet Pearson Correlation: 0.9702440386936102 Spearman Correlation: 0.9154231424429063 Coefficient of Determination: 0.9297320145549098 RMSE: 0.11896656264517405 NRMSE: 0.0423745548157343 MAPE: 26.95431149017475 Pearson Correlation: 0.8044403702293813 Spearman Correlation: 0.6603149665207796 Coefficient of Determination: 0.5992599200819407 RMSE: 0.4102709809316355 NRMSE: 0.09901078285870973 MAPE: 93.63452949512929 Predictor: RandomForests Pearson Correlation: 0.8687859464966861 Spearman Correlation: 0.712973988618374 Coefficient of Determination: 0.750824936077664 RMSE: 0.22402601379797127 NRMSE: 0.07979555255493188 MAPE: 52.8088761554254 Pearson Correlation: 0.7637621796030425 Spearman Correlation: 0.7321347430477312 Coefficient of Determination: 0.5524489897582678 RMSE: 0.4335714535629555 NRMSE: 0.10463389086153813 MAPE: 76.38489820863946 Protein: CCND1 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.8985152402574562e-15 NRMSE: 1.195779527522836e-15 MAPE: 5.241427063906217e-12 Pearson Correlation: 0.27156580922298157 Spearman Correlation: 0.235032855771269 Coefficient of Determination: 0.023308661389240926 RMSE: 0.2727238650006941 NRMSE: 0.17423995668384898 MAPE: 294.9888002872739 Predictor: ElasticNet Pearson Correlation: 0.8899983152703352 Spearman Correlation: 0.8720248057007122 Coefficient of Determination: 0.7063761411452909 RMSE: 0.12333994224139759 NRMSE: 0.07768564335470472 MAPE: 353.8847240314682 Pearson Correlation: 0.3573128939295028 Spearman Correlation: 0.2849187645731244 Coefficient of Determination: 0.1259500682193445 RMSE: 0.25799577651224 NRMSE: 0.16483036027666398 MAPE: 229.78175841297613 Predictor: RandomForests Pearson Correlation: 0.6213776920154902 Spearman Correlation: 0.6254347360955441 Coefficient of Determination: 0.3203233221279157 RMSE: 0.18765461682854678 NRMSE: 0.11819423109729088 MAPE: 507.5681452224666 Pearson Correlation: 0.3498341251502904 Spearman Correlation: 0.2949139016695969 Coefficient of Determination: 0.1169568753930833 RMSE: 0.2593196528601919 NRMSE: 0.16567616875595242 MAPE: 253.19520110171783 Protein: ERBB2 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 4.202817516175506e-15 NRMSE: 7.160191349090253e-16 MAPE: 1.998066731394861e-12 Pearson Correlation: 0.717400766477936 Spearman Correlation: 0.5616653574234094 Coefficient of Determination: 0.5121476907775062 RMSE: 0.6060715948273773 NRMSE: 0.13410147025719157 MAPE: 327.175868212353 Predictor: ElasticNet Pearson Correlation: 0.9913461702063013 Spearman Correlation: 0.9780451400025314 Coefficient of Determination: 0.9787378734474699 RMSE: 0.14988659940795457 NRMSE: 0.025535649080524483 MAPE: 200.48710668300092 Pearson Correlation: 0.809323623431581 Spearman Correlation: 0.657412187184379 Coefficient of Determination: 0.6541044946526304 RMSE: 0.5103313015800378 NRMSE: 0.1129176461068786 MAPE: 304.79742544225866 Predictor: RandomForests Pearson Correlation: 0.8657910284985194 Spearman Correlation: 0.7138574800771907 Coefficient of Determination: 0.7412490306053332 RMSE: 0.5228780970156561 NRMSE: 0.08908088948594581 MAPE: 459.94386478301885 Pearson Correlation: 0.8115021185763848 Spearman Correlation: 0.6524651488075495 Coefficient of Determination: 0.6334670148362189 RMSE: 0.5253349313877418 NRMSE: 0.11623740046194088 MAPE: 196.29549005395032 Protein: ERBB3 x_train_column_count: 20134 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999997880816034 Coefficient of Determination: 1.0 RMSE: 2.3316361857227674e-15 NRMSE: 6.292416847856729e-16 MAPE: 1.6177738103617521e-12 Pearson Correlation: 0.3610402102652332 Spearman Correlation: 0.3471788925048941 Coefficient of Determination: -0.10404741419098906 RMSE: 0.43812506451165384 NRMSE: 0.21197822013878861 MAPE: 268.09049168187147 Predictor: ElasticNet Pearson Correlation: 0.967015690777305 Spearman Correlation: 0.960607698799679 Coefficient of Determination: 0.8914894245841742 RMSE: 0.15446344719306265 NRMSE: 0.04168525104590313 MAPE: 93.91285023616196 Pearson Correlation: 0.41178327549489335 Spearman Correlation: 0.43969376176760316 Coefficient of Determination: 0.07237077972847006 RMSE: 0.4015979128070062 NRMSE: 0.19430527414168788 MAPE: 205.03379145608486 Predictor: RandomForests Pearson Correlation: 0.6314357211830337 Spearman Correlation: 0.6254255056956395 Coefficient of Determination: 0.312951561023298 RMSE: 0.38867210122111695 NRMSE: 0.10489144459977194 MAPE: 232.67718843179503 Pearson Correlation: 0.538778544054943 Spearman Correlation: 0.5330664970884924 Coefficient of Determination: 0.228688768495227 RMSE: 0.3662006109418455 NRMSE: 0.1771789838312813 MAPE: 225.3069305336877
Min-Max
scenario = Scenario.AllmRNA_Mutations
normalizeTechnique = NormalizeTechnique.MinMax
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.266811 | 0.102965 | 0.232299 | 0.000000 | 0.0 | 0.00000 | 0.165596 | 0.256402 | 0.0 | 0.00000 | ... | 0.362558 | 0.154626 | 0.343226 | 0.136973 | 0.283236 | 0.203583 | 0.106969 | 0.050188 | 0.019658 | 0.021305 |
| TCGA-A1-A0SH-01 | 0.074647 | 0.046655 | 0.060467 | 0.000000 | 0.0 | 0.00000 | 0.019946 | 0.108076 | 0.0 | 0.00000 | ... | 0.437102 | 0.171136 | 0.196632 | 0.028737 | 0.498917 | 0.208787 | 0.168174 | 0.119445 | 0.172767 | 0.000000 |
| TCGA-A1-A0SJ-01 | 0.122769 | 0.097168 | 0.035285 | 0.088368 | 0.0 | 0.00000 | 0.020200 | 0.129369 | 0.0 | 0.29443 | ... | 0.415293 | 0.914898 | 0.215818 | 0.074090 | 0.379839 | 0.104565 | 0.110857 | 0.079787 | 0.016343 | 0.000000 |
| TCGA-A1-A0SK-01 | 0.716855 | 1.000000 | 0.116251 | 0.076144 | 0.0 | 0.01449 | 0.000000 | 0.094313 | 0.0 | 0.00000 | ... | 0.334733 | 0.181185 | 0.763246 | 0.229344 | 0.511470 | 0.000000 | 0.246798 | 0.166438 | 0.018601 | 0.000000 |
| TCGA-A1-A0SQ-01 | 0.025757 | 0.011574 | 0.044865 | 0.000000 | 0.0 | 0.00000 | 0.022276 | 0.153652 | 0.0 | 0.00000 | ... | 0.537294 | 0.183640 | 0.239462 | 0.036770 | 0.323545 | 0.099038 | 0.071604 | 0.075950 | 0.006561 | 0.000000 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 1.0459050011904041e-15 NRMSE: 3.9610111766347433e-16 MAPE: 5.452755286899354e-12 Pearson Correlation: 0.13980061936310217 Spearman Correlation: 0.1856355477514389 Coefficient of Determination: -0.09590538261997539 RMSE: 0.2936074960894075 NRMSE: 0.14504650958112836 MAPE: 178.0093327153115 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: RandomForests Pearson Correlation: 0.6893338695699293 Spearman Correlation: 0.4948387643721538 Coefficient of Determination: 0.23776323482880313 RMSE: 0.1956548186829351 NRMSE: 0.07409764009957777 MAPE: 208.05616773568042 Pearson Correlation: 0.15022165636204643 Spearman Correlation: 0.2444541995902839 Coefficient of Determination: -0.013434768060642366 RMSE: 0.2823439649176449 NRMSE: 0.13948215613722 MAPE: 138.79811486815606 Protein: CDH1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 6.945379528311595e-15 NRMSE: 1.1674280215002765e-15 MAPE: 7.109700140066033e-12 Pearson Correlation: 0.6044463565759928 Spearman Correlation: 0.5133304067895816 Coefficient of Determination: 0.34979381042396973 RMSE: 0.9356164101417372 NRMSE: 0.15153645980721991 MAPE: 442.79997415923174 Predictor: ElasticNet Pearson Correlation: 0.730414275365729 Spearman Correlation: 0.7043067563885624 Coefficient of Determination: 0.458724771149142 RMSE: 0.8302029602493096 NRMSE: 0.13954632650048066 MAPE: 441.12926705211794 Pearson Correlation: 0.6898915094978914 Spearman Correlation: 0.6135840405814067 Coefficient of Determination: 0.42733750150597594 RMSE: 0.87805486320879 NRMSE: 0.14221354397473196 MAPE: 255.81941977576602 Predictor: RandomForests Pearson Correlation: 0.7732362323157869 Spearman Correlation: 0.7353149529230595 Coefficient of Determination: 0.5885380357243323 RMSE: 0.7238357833501861 NRMSE: 0.12166738664215723 MAPE: 178.5357067695411 Pearson Correlation: 0.7706975133963258 Spearman Correlation: 0.7024192761681789 Coefficient of Determination: 0.5850650516422916 RMSE: 0.7474158241520349 NRMSE: 0.12105468306048313 MAPE: 148.81719150017614 Protein: CDH2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999031343205 Coefficient of Determination: 1.0 RMSE: 1.6246804834222789e-15 NRMSE: 6.002063207402937e-16 MAPE: 9.774192580074569e-12 Pearson Correlation: 0.2434243438094867 Spearman Correlation: 0.3145107794361526 Coefficient of Determination: -0.022213293168727333 RMSE: 0.3792583768012351 NRMSE: 0.19572605501431342 MAPE: 183.35273307143333 Predictor: ElasticNet Pearson Correlation: 0.2541016692185118 Spearman Correlation: 0.2403074501315612 Coefficient of Determination: 0.0009678830261821147 RMSE: 0.3710147827243817 NRMSE: 0.13706413042531843 MAPE: 453.2346887718675 Pearson Correlation: 0.09393961867412082 Spearman Correlation: 0.14491756901765684 Coefficient of Determination: 0.00010468912569816524 RMSE: 0.3750953546153867 NRMSE: 0.19357762017618138 MAPE: 105.21321791114227 Predictor: RandomForests Pearson Correlation: 0.6688938306877342 Spearman Correlation: 0.5665986656635532 Coefficient of Determination: 0.24111552555866822 RMSE: 0.323362253588115 NRMSE: 0.11945983870230746 MAPE: 669.5224622450675 Pearson Correlation: 0.18916620554569433 Spearman Correlation: 0.22817773875719446 Coefficient of Determination: 0.03192915855078171 RMSE: 0.3690778562714745 NRMSE: 0.1904721351455202 MAPE: 105.1318904290896 Protein: CDH3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.2678470106177333e-15 NRMSE: 8.8949248654216e-16 MAPE: 5.759380928649328e-12 Pearson Correlation: 0.3881384092078604 Spearman Correlation: 0.4610672129548337 Coefficient of Determination: 0.03589137989001512 RMSE: 0.20087446146949323 NRMSE: 0.15374888938430875 MAPE: 459.53522506384627 Predictor: ElasticNet Pearson Correlation: 0.38724140453494743 Spearman Correlation: 0.40009410694214803 Coefficient of Determination: 0.02570957858863354 RMSE: 0.20609821855766763 NRMSE: 0.14459379985243562 MAPE: 122.1428891936286 Pearson Correlation: 0.46905984714190724 Spearman Correlation: 0.49472246610086823 Coefficient of Determination: 0.03492665098229997 RMSE: 0.20097493819041443 NRMSE: 0.15382579405470637 MAPE: 119.00880935152801 Predictor: RandomForests Pearson Correlation: 0.6825311192041936 Spearman Correlation: 0.6628560096947819 Coefficient of Determination: 0.3582346871361095 RMSE: 0.1672700325629156 NRMSE: 0.11735283196028765 MAPE: 444.50531941187865 Pearson Correlation: 0.4788700038361175 Spearman Correlation: 0.5331674958540631 Coefficient of Determination: 0.2064818296797366 RMSE: 0.18223852028977391 NRMSE: 0.13948497928815998 MAPE: 335.7781566799737 Protein: PTEN x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 2.2591252907311914e-15 NRMSE: 3.532366962287845e-16 MAPE: 2.5679405076200887e-12 Pearson Correlation: 0.13561659642178864 Spearman Correlation: 0.18614769290800898 Coefficient of Determination: -0.4912190070682876 RMSE: 0.6065064771578845 NRMSE: 0.19989007882073842 MAPE: 286.10427863832405 Predictor: ElasticNet Pearson Correlation: 0.5454769244197238 Spearman Correlation: 0.5168030173735174 Coefficient of Determination: 0.17057774931605418 RMSE: 0.5705464113477922 NRMSE: 0.08921060297831165 MAPE: 465.39287936666886 Pearson Correlation: 0.21940724565180228 Spearman Correlation: 0.2767827529021559 Coefficient of Determination: 0.04571173365024328 RMSE: 0.485181820729668 NRMSE: 0.15990436382890644 MAPE: 152.15060076233735 Predictor: RandomForests Pearson Correlation: 0.6734501236697481 Spearman Correlation: 0.5873131807392832 Coefficient of Determination: 0.352200551006689 RMSE: 0.504223896582486 NRMSE: 0.07884041851027848 MAPE: 208.5991870216766 Pearson Correlation: 0.30762663981422694 Spearman Correlation: 0.33524046434494204 Coefficient of Determination: 0.09272516692774768 RMSE: 0.47307953367191713 NRMSE: 0.15591573847205759 MAPE: 152.119877362353 Protein: BRCA2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999031343205 Coefficient of Determination: 1.0 RMSE: 1.220974156898179e-15 NRMSE: 7.898348860169608e-16 MAPE: 3.023536726161256e-12 Pearson Correlation: 0.1908881536515738 Spearman Correlation: 0.19455198828420023 Coefficient of Determination: -0.15818871803525036 RMSE: 0.19880992743660567 NRMSE: 0.1989691027187807 MAPE: 273.48767794095727 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: RandomForests Pearson Correlation: 0.6646492801259603 Spearman Correlation: 0.5783323049749448 Coefficient of Determination: 0.260509183576794 RMSE: 0.16993311050172077 NRMSE: 0.10992787865765384 MAPE: 145.80630678785718 Pearson Correlation: 0.35309001641955157 Spearman Correlation: 0.35596082816438057 Coefficient of Determination: 0.09671151984628801 RMSE: 0.17557457973348123 NRMSE: 0.17571515185496522 MAPE: 131.48508577043017 Protein: CDKN2A x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 3.703768841240386e-15 NRMSE: 8.37293736010034e-16 MAPE: 2.5372656254705402e-12 Pearson Correlation: 0.5703607438584692 Spearman Correlation: 0.5098087991415472 Coefficient of Determination: 0.32010546727984557 RMSE: 0.6158328138333138 NRMSE: 0.16630645796200752 MAPE: 1194.741846971283 Predictor: ElasticNet Pearson Correlation: 0.5447841178673639 Spearman Correlation: 0.4247328991929946 Coefficient of Determination: 0.2159817616681594 RMSE: 0.5690905067547973 NRMSE: 0.12865163484905556 MAPE: 155.36713257043152 Pearson Correlation: 0.5926992373954707 Spearman Correlation: 0.41056970051702274 Coefficient of Determination: 0.21101405865686318 RMSE: 0.6634018586175493 NRMSE: 0.1791525408094921 MAPE: 433.0475216049498 Predictor: RandomForests Pearson Correlation: 0.6757647614872638 Spearman Correlation: 0.6448690222035699 Coefficient of Determination: 0.44034004805471827 RMSE: 0.4808176191311576 NRMSE: 0.10869619512403245 MAPE: 154.5268658486716 Pearson Correlation: 0.7223631014573362 Spearman Correlation: 0.6426251097453908 Coefficient of Determination: 0.4679960627727733 RMSE: 0.5447528044975223 NRMSE: 0.14711120834391636 MAPE: 161.05658929517057 Protein: TP53 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.79534576990558e-15 NRMSE: 4.314697836831483e-16 MAPE: 2.9685717730629344e-12 Pearson Correlation: 0.5228491356186634 Spearman Correlation: 0.5263291386206224 Coefficient of Determination: 0.2254248164538929 RMSE: 0.37020294324739605 NRMSE: 0.133123428835052 MAPE: 521.1759566993658 Predictor: ElasticNet Pearson Correlation: 0.519254162657034 Spearman Correlation: 0.4928411324829729 Coefficient of Determination: 0.20368531937135803 RMSE: 0.40408018035046095 NRMSE: 0.09711131467206464 MAPE: 545.1032927925022 Pearson Correlation: 0.5419780607868545 Spearman Correlation: 0.5023509901473029 Coefficient of Determination: 0.23203798554825938 RMSE: 0.3686191959656711 NRMSE: 0.1325539199416272 MAPE: 572.441226059912 Predictor: RandomForests Pearson Correlation: 0.7031149891467939 Spearman Correlation: 0.5822154500532357 Coefficient of Determination: 0.4151592677357707 RMSE: 0.34629322446932087 NRMSE: 0.08322355791139652 MAPE: 582.7012327400585 Pearson Correlation: 0.5026294084853328 Spearman Correlation: 0.48341137450004884 Coefficient of Determination: 0.25065181459500663 RMSE: 0.36412450556139175 NRMSE: 0.13093764808565275 MAPE: 279.60993872101614 Protein: CTNNB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 3.8134774138931274e-15 NRMSE: 7.685828272352476e-16 MAPE: 2.4575906231604474e-12 Pearson Correlation: 0.42276398063538306 Spearman Correlation: 0.39740513120671156 Coefficient of Determination: 0.13034806928832987 RMSE: 0.700306643331779 NRMSE: 0.17374749251520347 MAPE: 245.84911880505555 Predictor: ElasticNet Pearson Correlation: 0.6114046075497698 Spearman Correlation: 0.6088587807118198 Coefficient of Determination: 0.26527067317013764 RMSE: 0.631931101572415 NRMSE: 0.127361811792816 MAPE: 639.507689954003 Pearson Correlation: 0.5044193668401379 Spearman Correlation: 0.45452638766949566 Coefficient of Determination: 0.19157298123640176 RMSE: 0.6752054255986695 NRMSE: 0.1675198297024437 MAPE: 311.93042208790405 Predictor: RandomForests Pearson Correlation: 0.6960797502211378 Spearman Correlation: 0.7270380833800759 Coefficient of Determination: 0.46791759693714274 RMSE: 0.537768662632475 NRMSE: 0.10838395361115648 MAPE: 391.9133094517845 Pearson Correlation: 0.5481341129446063 Spearman Correlation: 0.49940493610379477 Coefficient of Determination: 0.29197140177614966 RMSE: 0.6318891719765496 NRMSE: 0.1567729796994367 MAPE: 227.51186987703798 Protein: CCNE1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 1.625701946892546e-15 NRMSE: 3.9233099570252336e-16 MAPE: 3.2249083163999844e-13 Pearson Correlation: 0.7320793184547983 Spearman Correlation: 0.6383084577114428 Coefficient of Determination: 0.535837595474391 RMSE: 0.36588249373310106 NRMSE: 0.1303232390856994 MAPE: 51.79420954222296 Predictor: ElasticNet Pearson Correlation: 0.7060838596870957 Spearman Correlation: 0.6394994601675742 Coefficient of Determination: 0.42514618036064344 RMSE: 0.36671519317752693 NRMSE: 0.08849945536055384 MAPE: 76.99292816365677 Pearson Correlation: 0.7501168515743661 Spearman Correlation: 0.6091405716515462 Coefficient of Determination: 0.4364566112310545 RMSE: 0.40315340243337416 NRMSE: 0.14359871858713238 MAPE: 57.19202912506317 Predictor: RandomForests Pearson Correlation: 0.863156106128827 Spearman Correlation: 0.7215867798710542 Coefficient of Determination: 0.7361501249102242 RMSE: 0.2484440722228258 NRMSE: 0.059957060651790864 MAPE: 55.18184474999861 Pearson Correlation: 0.8452797234154074 Spearman Correlation: 0.7059557472263749 Coefficient of Determination: 0.7072893188507468 RMSE: 0.2905533820221425 NRMSE: 0.10349185468286463 MAPE: 44.40531059758389 Protein: CCND1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.1059134597767962e-15 NRMSE: 6.648431904009789e-16 MAPE: 2.0747030333379383e-12 Pearson Correlation: 0.460722293802694 Spearman Correlation: 0.4406155497024682 Coefficient of Determination: 0.17733721636507382 RMSE: 0.21309900442460172 NRMSE: 0.1517712697457422 MAPE: 1299.665216614946 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: RandomForests Pearson Correlation: 0.6336965574428526 Spearman Correlation: 0.6203517770037437 Coefficient of Determination: 0.28380364931207624 RMSE: 0.20217213899481803 NRMSE: 0.12154004340143683 MAPE: 337.99367037258367 Pearson Correlation: 0.493064782711198 Spearman Correlation: 0.4864696127207102 Coefficient of Determination: 0.19157907666086338 RMSE: 0.21124637638436908 NRMSE: 0.15045180928748297 MAPE: 1028.1454071943883 Protein: ERBB2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 3.77504527930336e-15 NRMSE: 6.431410939747108e-16 MAPE: 4.472730455077192e-12 Pearson Correlation: 0.763319561211206 Spearman Correlation: 0.6512340259486881 Coefficient of Determination: 0.5725880752000605 RMSE: 0.5929935772450324 NRMSE: 0.10995616118023965 MAPE: 305.10506069311384 Predictor: ElasticNet Pearson Correlation: 0.850815922558798 Spearman Correlation: 0.6927434239343859 Coefficient of Determination: 0.595465489865637 RMSE: 0.6482020383292972 NRMSE: 0.11043188550169468 MAPE: 681.0504724809166 Pearson Correlation: 0.7590254902413874 Spearman Correlation: 0.5988781582284656 Coefficient of Determination: 0.4878931173715466 RMSE: 0.6490930790047497 NRMSE: 0.12035844224082137 MAPE: 399.88060837337514 Predictor: RandomForests Pearson Correlation: 0.8692558765225662 Spearman Correlation: 0.7395710547810362 Coefficient of Determination: 0.7468602847715036 RMSE: 0.5127583575624699 NRMSE: 0.08735682531687648 MAPE: 421.6485011648075 Pearson Correlation: 0.8216578577413898 Spearman Correlation: 0.6581406692030047 Coefficient of Determination: 0.6686434728080688 RMSE: 0.5221249384337872 NRMSE: 0.09681530473461657 MAPE: 273.6693526914054 Protein: ERBB3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 2.0846888782527143e-15 NRMSE: 5.62597694287827e-16 MAPE: 1.3866092942418258e-12 Pearson Correlation: 0.3244090162242673 Spearman Correlation: 0.34319620426838054 Coefficient of Determination: -0.01788339100258174 RMSE: 0.46966316369469624 NRMSE: 0.18845626432279478 MAPE: 320.6108087691674 Predictor: ElasticNet Pearson Correlation: 0.4673197684729346 Spearman Correlation: 0.47050046815182445 Coefficient of Determination: 0.1317179693917695 RMSE: 0.42783249274850765 NRMSE: 0.11545971030625202 MAPE: 205.9572358306922 Pearson Correlation: 0.3847297129728083 Spearman Correlation: 0.3873699972810377 Coefficient of Determination: 0.09551597927344047 RMSE: 0.44272896347681684 NRMSE: 0.17764869168785985 MAPE: 231.3849670506037 Predictor: RandomForests Pearson Correlation: 0.6282795399923213 Spearman Correlation: 0.6132595940126941 Coefficient of Determination: 0.33623150369662325 RMSE: 0.37406896364610187 NRMSE: 0.10095047690201293 MAPE: 221.66673881254457 Pearson Correlation: 0.41404691070652694 Spearman Correlation: 0.4166501032220726 Coefficient of Determination: 0.16077722328114563 RMSE: 0.4264578532205707 NRMSE: 0.17111977289603023 MAPE: 256.0023996159598 Fold: 2 Protein: RB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 1.1560346739547748e-15 NRMSE: 4.2277452967918914e-16 MAPE: 4.819543090664799e-12 Pearson Correlation: 0.012249805370232377 Spearman Correlation: 0.12737293922544143 Coefficient of Determination: -0.4663407310033778 RMSE: 0.29656056025674166 NRMSE: 0.16990785040663087 MAPE: 592.717331504544 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: RandomForests Pearson Correlation: 0.6987916439180556 Spearman Correlation: 0.5322399909411258 Coefficient of Determination: 0.2600681831253894 RMSE: 0.2021807168841918 NRMSE: 0.07393970044038613 MAPE: 185.13642364168197 Pearson Correlation: -0.05934870427127739 Spearman Correlation: 0.059379572724612244 Coefficient of Determination: -0.07998376792758566 RMSE: 0.2545098285596907 NRMSE: 0.14581580855020035 MAPE: 240.02166911164102 Protein: CDH1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 5.674368550476344e-15 NRMSE: 9.103021657939108e-16 MAPE: 5.990399637683481e-12 Pearson Correlation: 0.6216532610955975 Spearman Correlation: 0.6115988684030828 Coefficient of Determination: 0.32114924941163436 RMSE: 0.9480233647217192 NRMSE: 0.1683579052959899 MAPE: 393.43728188150203 Predictor: ElasticNet Pearson Correlation: 0.7260518191386676 Spearman Correlation: 0.6730084494765689 Coefficient of Determination: 0.4459144793890619 RMSE: 0.8341381509695132 NRMSE: 0.13381537674974142 MAPE: 404.3895903163461 Pearson Correlation: 0.6965557450484934 Spearman Correlation: 0.7205297044190813 Coefficient of Determination: 0.4010035052515619 RMSE: 0.8905207229073825 NRMSE: 0.15814610600379728 MAPE: 167.63647605724438 Predictor: RandomForests Pearson Correlation: 0.796330516428993 Spearman Correlation: 0.71387418433711 Coefficient of Determination: 0.6263307512345694 RMSE: 0.6850042464735779 NRMSE: 0.10989079112434072 MAPE: 154.29377293222015 Pearson Correlation: 0.6724080439527454 Spearman Correlation: 0.6932991576472953 Coefficient of Determination: 0.4181315747699218 RMSE: 0.877696335755613 NRMSE: 0.15586864424713426 MAPE: 216.6025755609669 Protein: CDH2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 1.7787313581635817e-15 NRMSE: 6.44514587348207e-16 MAPE: 1.4590855999300155e-11 Pearson Correlation: 0.31536166735050175 Spearman Correlation: 0.3281289630279973 Coefficient of Determination: 0.059551247189308154 RMSE: 0.37537791971222567 NRMSE: 0.19775779814886216 MAPE: 603.0952919890874 Predictor: ElasticNet Pearson Correlation: 0.19716831665012377 Spearman Correlation: 0.19732507366150534 Coefficient of Determination: 0.0011334753438093648 RMSE: 0.36788961186115665 NRMSE: 0.13330299726833708 MAPE: 465.0045258027835 Pearson Correlation: 0.09995972263793948 Spearman Correlation: 0.1055701882743147 Coefficient of Determination: 0.00035544266379106126 RMSE: 0.38701157880863984 NRMSE: 0.20388667970131225 MAPE: 137.23938141812081 Predictor: RandomForests Pearson Correlation: 0.690856413964739 Spearman Correlation: 0.5991979909283358 Coefficient of Determination: 0.2385536161098164 RMSE: 0.32120585989700473 NRMSE: 0.11638736861258235 MAPE: 385.0580845571761 Pearson Correlation: 0.2609607299361275 Spearman Correlation: 0.3034143010438006 Coefficient of Determination: 0.0459585350617947 RMSE: 0.37808093740467613 NRMSE: 0.19918181058844894 MAPE: 131.52009254641996 Protein: CDH3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 9.93887878196251e-16 NRMSE: 7.479983730300745e-16 MAPE: 4.174229043246861e-12 Pearson Correlation: 0.32651127683429826 Spearman Correlation: 0.37159301531557903 Coefficient of Determination: -0.2814740630584629 RMSE: 0.2240583019600554 NRMSE: 0.18436460294582033 MAPE: 1884.241864914377 Predictor: ElasticNet Pearson Correlation: 0.4669419149585029 Spearman Correlation: 0.4676263084858018 Coefficient of Determination: 0.0609186400452123 RMSE: 0.20128069795810313 NRMSE: 0.15148352032249074 MAPE: 128.58055547578374 Pearson Correlation: 0.23153978351893417 Spearman Correlation: 0.28577211979319095 Coefficient of Determination: -0.1083061450211511 RMSE: 0.20837038811652725 NRMSE: 0.17145592702750537 MAPE: 489.1388988992813 Predictor: RandomForests Pearson Correlation: 0.6904187857559771 Spearman Correlation: 0.6753870316617099 Coefficient of Determination: 0.38907748225083316 RMSE: 0.16234674518072498 NRMSE: 0.12218189186721527 MAPE: 268.8548372096978 Pearson Correlation: 0.3241369704191651 Spearman Correlation: 0.4028387474392742 Coefficient of Determination: -0.023452337408445212 RMSE: 0.20023497650625108 NRMSE: 0.16476176788138822 MAPE: 1367.1896654321022 Protein: PTEN x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 2.80720695763761e-15 NRMSE: 4.389347131010257e-16 MAPE: 2.6317272766534587e-12 Pearson Correlation: 0.15810662316446294 Spearman Correlation: 0.1314505901863233 Coefficient of Determination: -0.39882139041194264 RMSE: 0.6051141027812971 NRMSE: 0.20294945760038138 MAPE: 2802.235838665345 Predictor: ElasticNet Pearson Correlation: 0.5127178515528278 Spearman Correlation: 0.4951726022335829 Coefficient of Determination: 0.1508865495431443 RMSE: 0.5747687599827884 NRMSE: 0.08987080916000131 MAPE: 303.6201765730733 Pearson Correlation: 0.30901751075646294 Spearman Correlation: 0.29319090820407767 Coefficient of Determination: 0.08420649896620847 RMSE: 0.4896152326816621 NRMSE: 0.16421224600270398 MAPE: 578.3695225650473 Predictor: RandomForests Pearson Correlation: 0.6526063544290698 Spearman Correlation: 0.5628234835736983 Coefficient of Determination: 0.34878534557928365 RMSE: 0.5033526709835953 NRMSE: 0.07870419372740134 MAPE: 221.89652319246892 Pearson Correlation: 0.3192834814070131 Spearman Correlation: 0.3222027119305434 Coefficient of Determination: 0.10023271215540464 RMSE: 0.4853122371717978 NRMSE: 0.16276906264146693 MAPE: 468.14027559933777 Protein: BRCA2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.9999999999999996 Spearman Correlation: 0.9999999225074571 Coefficient of Determination: 1.0 RMSE: 1.0414949309811662e-15 NRMSE: 6.709582418947761e-16 MAPE: 1.896293107531965e-12 Pearson Correlation: 0.2176215617072688 Spearman Correlation: 0.1795824797580724 Coefficient of Determination: -0.16594430352509426 RMSE: 0.20860201418824906 NRMSE: 0.14120204300207068 MAPE: 321.2803789912347 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: RandomForests Pearson Correlation: 0.6633017999011463 Spearman Correlation: 0.5895854125552045 Coefficient of Determination: 0.2600855072133481 RMSE: 0.1680146903029947 NRMSE: 0.10823945260299225 MAPE: 179.15238796072825 Pearson Correlation: 0.38899522199017017 Spearman Correlation: 0.40819920007804117 Coefficient of Determination: 0.09760763474163947 RMSE: 0.1835174226036752 NRMSE: 0.12422236237243893 MAPE: 144.10432269552808 Protein: CDKN2A x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 2.666071537104386e-15 NRMSE: 6.027063495206026e-16 MAPE: 2.6360763673246397e-12 Pearson Correlation: 0.48551988204467184 Spearman Correlation: 0.43412837771924695 Coefficient of Determination: 0.2110716103524667 RMSE: 0.5981536298389052 NRMSE: 0.16159326503104204 MAPE: 306.0638893685161 Predictor: ElasticNet Pearson Correlation: 0.5777045551729364 Spearman Correlation: 0.4469644932282369 Coefficient of Determination: 0.24923919979911657 RMSE: 0.5747649237300438 NRMSE: 0.1299344238114714 MAPE: 257.1898743959944 Pearson Correlation: 0.5345997424542029 Spearman Correlation: 0.41401814457126135 Coefficient of Determination: 0.21703015536586456 RMSE: 0.5958905089979454 NRMSE: 0.16098187513452167 MAPE: 144.38166864223533 Predictor: RandomForests Pearson Correlation: 0.6834234499874097 Spearman Correlation: 0.6454562869232578 Coefficient of Determination: 0.4460122820102085 RMSE: 0.4937300157627911 NRMSE: 0.11161524036685679 MAPE: 183.79123176509086 Pearson Correlation: 0.6949765984081145 Spearman Correlation: 0.5705784801482783 Coefficient of Determination: 0.4447885327299339 RMSE: 0.5017913424384337 NRMSE: 0.13556066091377614 MAPE: 140.77123805087118 Protein: TP53 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.7226328745759816e-15 NRMSE: 4.613989218095571e-16 MAPE: 2.2821562225506906e-12 Pearson Correlation: 0.3028130034268825 Spearman Correlation: 0.29962930445810165 Coefficient of Determination: -0.029668394060773595 RMSE: 0.4154119735770543 NRMSE: 0.13680618263693536 MAPE: 1822.1325862245446 Predictor: ElasticNet Pearson Correlation: 0.523032786151912 Spearman Correlation: 0.5073744323937731 Coefficient of Determination: 0.21456880598059724 RMSE: 0.40352738058130155 NRMSE: 0.1080828660991835 MAPE: 314.041688374614 Pearson Correlation: 0.43990510878068406 Spearman Correlation: 0.4540435079504439 Coefficient of Determination: 0.16707475595806376 RMSE: 0.3736227661934475 NRMSE: 0.12304388809268811 MAPE: 1684.4381210041238 Predictor: RandomForests Pearson Correlation: 0.7169555690068461 Spearman Correlation: 0.6062689612158723 Coefficient of Determination: 0.40951802844800944 RMSE: 0.34988252872153186 NRMSE: 0.09371435080260664 MAPE: 301.322920470825 Pearson Correlation: 0.6173263784327185 Spearman Correlation: 0.48974062255014283 Coefficient of Determination: 0.3111418742287334 RMSE: 0.33977796582043557 NRMSE: 0.11189789752031469 MAPE: 1538.371013642553 Protein: CTNNB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 3.101614620342309e-15 NRMSE: 6.100736861412883e-16 MAPE: 1.8310030980074895e-12 Pearson Correlation: 0.4413672957335632 Spearman Correlation: 0.43834260072188086 Coefficient of Determination: 0.1119446862655129 RMSE: 0.7223564318804198 NRMSE: 0.17977562327478655 MAPE: 280.21682391781735 Predictor: ElasticNet Pearson Correlation: 0.5749422966148354 Spearman Correlation: 0.5541057109506021 Coefficient of Determination: 0.24183967239691884 RMSE: 0.6312606267170946 NRMSE: 0.12416613428739076 MAPE: 593.9041530898008 Pearson Correlation: 0.5062168624193608 Spearman Correlation: 0.5465466783728418 Coefficient of Determination: 0.09998163203142907 RMSE: 0.7272056121991846 NRMSE: 0.18098245742992575 MAPE: 242.04460585355517 Predictor: RandomForests Pearson Correlation: 0.6884765273868737 Spearman Correlation: 0.6452320610136008 Coefficient of Determination: 0.4611354222873677 RMSE: 0.5321915719892693 NRMSE: 0.10467969551323157 MAPE: 390.47701271756114 Pearson Correlation: 0.5638433959936578 Spearman Correlation: 0.5462198809872207 Coefficient of Determination: 0.2704515467932552 RMSE: 0.6547245200871703 NRMSE: 0.16294380928477897 MAPE: 192.72276914574073 Protein: CCNE1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.9467453758947655e-15 NRMSE: 4.698084745263328e-16 MAPE: 4.46687623910659e-13 Pearson Correlation: 0.7319084638859513 Spearman Correlation: 0.6072285630670179 Coefficient of Determination: 0.5015054515375101 RMSE: 0.29531831073094217 NRMSE: 0.1604999542013501 MAPE: 49.29800615718663 Predictor: ElasticNet Pearson Correlation: 0.7244999099493741 Spearman Correlation: 0.6343148480494285 Coefficient of Determination: 0.4539560694675707 RMSE: 0.37893015713720146 NRMSE: 0.09144729520409331 MAPE: 74.20369350935097 Pearson Correlation: 0.7532150082942112 Spearman Correlation: 0.643527460735538 Coefficient of Determination: 0.5345886898693637 RMSE: 0.28535049839162135 NRMSE: 0.15508263544455209 MAPE: 47.220827717637995 Predictor: RandomForests Pearson Correlation: 0.8642745093412254 Spearman Correlation: 0.7121101526765361 Coefficient of Determination: 0.7412975934721886 RMSE: 0.26082283565065445 NRMSE: 0.06294443025572663 MAPE: 68.33925896047369 Pearson Correlation: 0.8372200191372058 Spearman Correlation: 0.7378184954667834 Coefficient of Determination: 0.6967541059838958 RMSE: 0.23033377928569565 NRMSE: 0.12518208212310702 MAPE: 43.2559401147665 Protein: CCND1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 9.37292830019143e-16 NRMSE: 5.63473344085765e-16 MAPE: 3.836208345356826e-12 Pearson Correlation: 0.26099168284284063 Spearman Correlation: 0.3520876012096381 Coefficient of Determination: -0.06383957598242929 RMSE: 0.24282822953851838 NRMSE: 0.18786611804366404 MAPE: 453.1707367738738 Predictor: ElasticNet Pearson Correlation: 0.2553211072643501 Spearman Correlation: 0.2013501874186171 Coefficient of Determination: 0.0010956886527865306 RMSE: 0.23861317613783342 NRMSE: 0.14344734110316903 MAPE: 629.5364547656819 Pearson Correlation: 0.06978611061687223 Spearman Correlation: 0.08860598965954541 Coefficient of Determination: -0.0017641462745487946 RMSE: 0.2356371949239719 NRMSE: 0.18230271316145627 MAPE: 420.4752730384974 Predictor: RandomForests Pearson Correlation: 0.626890179461012 Spearman Correlation: 0.6314754050975873 Coefficient of Determination: 0.33556605050434707 RMSE: 0.19460696748334683 NRMSE: 0.11699208106392062 MAPE: 465.4601492818465 Pearson Correlation: 0.20925385127300225 Spearman Correlation: 0.3234806360355088 Coefficient of Determination: 0.014889821895411215 RMSE: 0.2336702941555634 NRMSE: 0.18078100371012829 MAPE: 311.7655775507165 Protein: ERBB2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 4.564158043864059e-15 NRMSE: 8.190797415544854e-16 MAPE: 4.0180466170728175e-12 Pearson Correlation: 0.693850110619301 Spearman Correlation: 0.4857623646473515 Coefficient of Determination: 0.4778621780915929 RMSE: 0.7639244110517891 NRMSE: 0.1301470962829087 MAPE: 2542.4108383300945 Predictor: ElasticNet Pearson Correlation: 0.851765776958054 Spearman Correlation: 0.7068096902644325 Coefficient of Determination: 0.5933721498500008 RMSE: 0.6268388897695268 NRMSE: 0.11249194942295404 MAPE: 277.347202538798 Pearson Correlation: 0.762619634018185 Spearman Correlation: 0.5186567164179106 Coefficient of Determination: 0.4527118378253021 RMSE: 0.7821063980884932 NRMSE: 0.13324469701833028 MAPE: 1969.53608559205 Predictor: RandomForests Pearson Correlation: 0.8631775258087501 Spearman Correlation: 0.7280247289722156 Coefficient of Determination: 0.7402258626345581 RMSE: 0.5010203063948734 NRMSE: 0.08991265839866364 MAPE: 229.2523982873941 Pearson Correlation: 0.7849110615706305 Spearman Correlation: 0.5317589335597037 Coefficient of Determination: 0.5964691106957325 RMSE: 0.6715776024560737 NRMSE: 0.11441429757160906 MAPE: 1448.6206618710692 Protein: ERBB3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999997868954927 Coefficient of Determination: 1.0 RMSE: 1.7930748907524716e-15 NRMSE: 4.838994488560079e-16 MAPE: 1.3344005628426648e-12 Pearson Correlation: 0.27041363648924355 Spearman Correlation: 0.3115110720905278 Coefficient of Determination: -0.02100333359042894 RMSE: 0.5231847366249477 NRMSE: 0.1930863107056594 MAPE: 290.5826009400093 Predictor: ElasticNet Pearson Correlation: 0.4644851077396385 Spearman Correlation: 0.47212235315214923 Coefficient of Determination: 0.1285027503178099 RMSE: 0.4155495914293499 NRMSE: 0.11214490777940447 MAPE: 198.76544368416072 Pearson Correlation: 0.37798777295024033 Spearman Correlation: 0.36525217051994935 Coefficient of Determination: 0.08690585758122416 RMSE: 0.4947653349157236 NRMSE: 0.18259785979270798 MAPE: 300.8736487279012 Predictor: RandomForests Pearson Correlation: 0.6393714635490555 Spearman Correlation: 0.6361349998598498 Coefficient of Determination: 0.3487599548934015 RMSE: 0.35921990862736747 NRMSE: 0.09694314314442364 MAPE: 189.08056997952667 Pearson Correlation: 0.42114052062191293 Spearman Correlation: 0.45584820993073843 Coefficient of Determination: 0.1646981466269246 RMSE: 0.47322012713306055 NRMSE: 0.17464639562925038 MAPE: 352.09447399711024 Fold: 3 Protein: RB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.5379336302010361e-15 NRMSE: 5.624391567440887e-16 MAPE: 5.7312332582156575e-12 Pearson Correlation: 0.0893203719253441 Spearman Correlation: 0.11229317073778977 Coefficient of Determination: -0.3402637980445642 RMSE: 0.2566211274217335 NRMSE: 0.18006731087593744 MAPE: 442.4470672586118 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: RandomForests Pearson Correlation: 0.7177961736175155 Spearman Correlation: 0.5027357427248669 Coefficient of Determination: 0.23724900496410517 RMSE: 0.21011302693835185 NRMSE: 0.07684063302309532 MAPE: 236.2244392722236 Pearson Correlation: 0.20584912661484062 Spearman Correlation: 0.1455005673387449 Coefficient of Determination: 0.008788869771833463 RMSE: 0.22068882895684594 NRMSE: 0.15485413991386526 MAPE: 191.5834057518234 Protein: CDH1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 6.878473602353985e-15 NRMSE: 1.0952634633218662e-15 MAPE: 4.711942655685615e-12 Pearson Correlation: 0.499068280233162 Spearman Correlation: 0.36707939001733186 Coefficient of Determination: 0.041901038964908155 RMSE: 0.9216030483408865 NRMSE: 0.18118252827839548 MAPE: 437.21020143987266 Predictor: ElasticNet Pearson Correlation: 0.7382994956825992 Spearman Correlation: 0.7224837958541752 Coefficient of Determination: 0.48589953739298897 RMSE: 0.8422753225030298 NRMSE: 0.13411600307363297 MAPE: 449.3685948169019 Pearson Correlation: 0.5814356452612948 Spearman Correlation: 0.5193157021908005 Coefficient of Determination: 0.2887180280362621 RMSE: 0.7940715174790005 NRMSE: 0.1561104701527544 MAPE: 213.7659281496885 Predictor: RandomForests Pearson Correlation: 0.7837746589873575 Spearman Correlation: 0.7447451728710385 Coefficient of Determination: 0.6070773776697997 RMSE: 0.7363488217577681 NRMSE: 0.11724926304222286 MAPE: 205.6536476840205 Pearson Correlation: 0.7416071623787494 Spearman Correlation: 0.5269904287861092 Coefficient of Determination: 0.5365292341871559 RMSE: 0.6409879875917828 NRMSE: 0.12601501741669932 MAPE: 145.6855322910714 Protein: CDH2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 2.1643462663861734e-15 NRMSE: 7.842402588543277e-16 MAPE: 6.529501688996125e-12 Pearson Correlation: 0.050984536034182265 Spearman Correlation: 0.10306113542562874 Coefficient of Determination: -0.3417758395463164 RMSE: 0.38454738419647594 NRMSE: 0.20261944074255273 MAPE: 3392.206405937175 Predictor: ElasticNet Pearson Correlation: 0.2737805080097836 Spearman Correlation: 0.3042664795825503 Coefficient of Determination: 0.006203638595115413 RMSE: 0.38005359574724973 NRMSE: 0.1377105571951771 MAPE: 291.97455595644936 Pearson Correlation: -0.0034833454798945123 Spearman Correlation: 0.02875098193244305 Coefficient of Determination: -0.002673063217226712 RMSE: 0.3324218419672666 NRMSE: 0.17515429951696979 MAPE: 613.880072078392 Predictor: RandomForests Pearson Correlation: 0.6514835534697939 Spearman Correlation: 0.5582056677572438 Coefficient of Determination: 0.25481118845926676 RMSE: 0.32910107998366306 NRMSE: 0.11924816290443623 MAPE: 239.6242951611399 Pearson Correlation: -0.015780099212428855 Spearman Correlation: 0.01919475305178369 Coefficient of Determination: -0.04241949831474301 RMSE: 0.33894648995360294 NRMSE: 0.17859216070225883 MAPE: 2444.093497557562 Protein: CDH3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.2967062988989535e-15 NRMSE: 9.097395036334355e-16 MAPE: 5.1005731088814545e-12 Pearson Correlation: 0.22955092227922022 Spearman Correlation: 0.23109265701567352 Coefficient of Determination: -0.31649544736681823 RMSE: 0.2160852883084532 NRMSE: 0.1879541853822864 MAPE: 355.711435342362 Predictor: ElasticNet Pearson Correlation: 0.4406149763856245 Spearman Correlation: 0.4528111916328152 Coefficient of Determination: 0.04423261812791446 RMSE: 0.20775759581577122 NRMSE: 0.14575798101235563 MAPE: 160.48917033482897 Pearson Correlation: 0.42068467623342926 Spearman Correlation: 0.41948902106011293 Coefficient of Determination: 0.04070743147206435 RMSE: 0.18445526632617829 NRMSE: 0.16044192361823678 MAPE: 102.16872046768148 Predictor: RandomForests Pearson Correlation: 0.6924280779807354 Spearman Correlation: 0.6878409212762157 Coefficient of Determination: 0.3791233115704685 RMSE: 0.1674493574999244 NRMSE: 0.11747864223769743 MAPE: 528.1318381179526 Pearson Correlation: 0.37494010304723074 Spearman Correlation: 0.38487512313121114 Coefficient of Determination: 0.1369518415149572 RMSE: 0.17495768928596758 NRMSE: 0.1521807903885181 MAPE: 189.64329079817165 Protein: PTEN x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.7122978473440965e-15 NRMSE: 4.2409473025472545e-16 MAPE: 4.192138047274432e-12 Pearson Correlation: 0.2729404877546071 Spearman Correlation: 0.26377635631366975 Coefficient of Determination: -0.18200473292238195 RMSE: 0.5120261796663594 NRMSE: 0.12241815609103415 MAPE: 180.40337622397092 Predictor: ElasticNet Pearson Correlation: 0.5197343269721458 Spearman Correlation: 0.4987427653475235 Coefficient of Determination: 0.15665304075368192 RMSE: 0.5779056661509914 NRMSE: 0.09036129562207668 MAPE: 387.57093671808684 Pearson Correlation: 0.24244943501429908 Spearman Correlation: 0.23693811643536705 Coefficient of Determination: 0.02072951815155044 RMSE: 0.4660514794382507 NRMSE: 0.11142626104295192 MAPE: 103.58082852010895 Predictor: RandomForests Pearson Correlation: 0.6928125999048764 Spearman Correlation: 0.5911850278975127 Coefficient of Determination: 0.3427427001861867 RMSE: 0.5101777569396423 NRMSE: 0.07977136376196424 MAPE: 205.92068528065042 Pearson Correlation: 0.37054995124959 Spearman Correlation: 0.3789698125911795 Coefficient of Determination: 0.11781995200733186 RMSE: 0.4423450530119728 NRMSE: 0.10575839262945842 MAPE: 101.37081286889594 Protein: BRCA2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 1.0694074774047774e-15 NRMSE: 7.207609774113562e-16 MAPE: 3.5559567583187957e-12 Pearson Correlation: 0.1439307397316159 Spearman Correlation: 0.16414419132408137 Coefficient of Determination: -0.09820641010091058 RMSE: 0.22439975722076755 NRMSE: 0.15434438452755542 MAPE: 385.8414024155946 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: RandomForests Pearson Correlation: 0.6732588104243932 Spearman Correlation: 0.6135155071083594 Coefficient of Determination: 0.29056485632193996 RMSE: 0.16007538807561786 NRMSE: 0.10788786838191698 MAPE: 171.81361037250835 Pearson Correlation: 0.1905033058406429 Spearman Correlation: 0.2386638237384506 Coefficient of Determination: 0.03622959627094613 RMSE: 0.21021668746259922 NRMSE: 0.1445891281063899 MAPE: 193.77679512434162 Protein: CDKN2A x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 3.0508126447808007e-15 NRMSE: 7.122741512842736e-16 MAPE: 2.7957808572234667e-12 Pearson Correlation: 0.4395468549903024 Spearman Correlation: 0.4129053978229156 Coefficient of Determination: 0.14732991177145804 RMSE: 0.6062510554185303 NRMSE: 0.18716651397565073 MAPE: 201.46255137287886 Predictor: ElasticNet Pearson Correlation: 0.5880422454462405 Spearman Correlation: 0.45902445455243734 Coefficient of Determination: 0.2773622469359739 RMSE: 0.5675039472438669 NRMSE: 0.1324953182769581 MAPE: 215.9273679409216 Pearson Correlation: 0.38119906024126143 Spearman Correlation: 0.3121111235800945 Coefficient of Determination: 0.12889785018644684 RMSE: 0.6127686474880805 NRMSE: 0.18917867539998162 MAPE: 137.57970335889976 Predictor: RandomForests Pearson Correlation: 0.6957018517544405 Spearman Correlation: 0.6829481630115467 Coefficient of Determination: 0.4688002358924771 RMSE: 0.4865612291470864 NRMSE: 0.11359759739145647 MAPE: 167.38414075524753 Pearson Correlation: 0.598769226183882 Spearman Correlation: 0.5696006184615768 Coefficient of Determination: 0.351500800466501 RMSE: 0.5287090152024128 NRMSE: 0.16322713568658354 MAPE: 102.42625000722347 Protein: TP53 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.9285637801653267e-15 NRMSE: 4.634856477205785e-16 MAPE: 7.172622639172376e-12 Pearson Correlation: 0.40035140842118844 Spearman Correlation: 0.375777752839811 Coefficient of Determination: 0.0442672533071935 RMSE: 0.42081311646755376 NRMSE: 0.15692086574792527 MAPE: 801.8742255761551 Predictor: ElasticNet Pearson Correlation: 0.520500404893472 Spearman Correlation: 0.4987800629813702 Coefficient of Determination: 0.21433231027528898 RMSE: 0.3989705281301784 NRMSE: 0.09588332807742814 MAPE: 575.2497453351142 Pearson Correlation: 0.44480713085774604 Spearman Correlation: 0.48714572500904 Coefficient of Determination: 0.15843017199438647 RMSE: 0.39488088655267345 NRMSE: 0.14725075849657246 MAPE: 293.1816424517865 Predictor: RandomForests Pearson Correlation: 0.7136745550601518 Spearman Correlation: 0.6044866719573476 Coefficient of Determination: 0.41493864564943617 RMSE: 0.3442881500018242 NRMSE: 0.08274168469161843 MAPE: 528.8030289421532 Pearson Correlation: 0.5214548866850929 Spearman Correlation: 0.4497088492375217 Coefficient of Determination: 0.23891961709998 RMSE: 0.3755227897987324 NRMSE: 0.14003214010520693 MAPE: 387.1948645644954 Protein: CTNNB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.4371881947939e-15 NRMSE: 6.760795033032849e-16 MAPE: 1.7031628524939453e-12 Pearson Correlation: 0.3248789754645069 Spearman Correlation: 0.2794124615020137 Coefficient of Determination: -0.16186056242628588 RMSE: 0.6607185318641298 NRMSE: 0.2159987354487331 MAPE: 1683.6577836364756 Predictor: ElasticNet Pearson Correlation: 0.6163767896729853 Spearman Correlation: 0.6104950536708352 Coefficient of Determination: 0.2954142524226313 RMSE: 0.6456613016821227 NRMSE: 0.1269986824709132 MAPE: 314.1625986938985 Pearson Correlation: 0.3214074698996098 Spearman Correlation: 0.3142807266923528 Coefficient of Determination: 0.09529758935585542 RMSE: 0.5830319526446096 NRMSE: 0.190601834857174 MAPE: 1970.8009012380742 Predictor: RandomForests Pearson Correlation: 0.7019166497273588 Spearman Correlation: 0.680315302187137 Coefficient of Determination: 0.48355444444691364 RMSE: 0.5527771755514128 NRMSE: 0.10872879141451866 MAPE: 217.37556609839928 Pearson Correlation: 0.44173217409278925 Spearman Correlation: 0.2950435790969963 Coefficient of Determination: 0.17075073366586702 RMSE: 0.5581899730150711 NRMSE: 0.18248062147015956 MAPE: 1237.9047424718258 Protein: CCNE1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.9999999999999996 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.8803120114962905e-15 NRMSE: 4.537760966035887e-16 MAPE: 3.754723895964084e-13 Pearson Correlation: 0.6325217536915895 Spearman Correlation: 0.49337024152420855 Coefficient of Determination: 0.23738929307357814 RMSE: 0.318648429940768 NRMSE: 0.13880229557031318 MAPE: 91.60044193089603 Predictor: ElasticNet Pearson Correlation: 0.7450427498066826 Spearman Correlation: 0.64730233587803 Coefficient of Determination: 0.4922359009666253 RMSE: 0.3722659104245969 NRMSE: 0.08983901113125875 MAPE: 69.12055199500881 Pearson Correlation: 0.5941122337843785 Spearman Correlation: 0.5437997980024689 Coefficient of Determination: 0.3442513925518893 RMSE: 0.295480634029879 NRMSE: 0.12871047350693862 MAPE: 65.42486763988045 Predictor: RandomForests Pearson Correlation: 0.8676463449655307 Spearman Correlation: 0.7287083312359415 Coefficient of Determination: 0.7477750454238562 RMSE: 0.26237128295289913 NRMSE: 0.06331811737164832 MAPE: 55.05739769386169 Pearson Correlation: 0.7790077361172058 Spearman Correlation: 0.668784818177528 Coefficient of Determination: 0.5683772967659345 RMSE: 0.239724528953781 NRMSE: 0.10442328220315415 MAPE: 82.11822550877005 Protein: CCND1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.2334336806924439e-15 NRMSE: 7.415046594921572e-16 MAPE: 2.4218741138281637e-12 Pearson Correlation: 0.23376617394748753 Spearman Correlation: 0.30363720245888354 Coefficient of Determination: -0.10064095410399543 RMSE: 0.2200408177496087 NRMSE: 0.20850427615021716 MAPE: 332.2493205472469 Predictor: ElasticNet Pearson Correlation: 0.22324045281592123 Spearman Correlation: 0.2597344851521026 Coefficient of Determination: 0.0003115901717327674 RMSE: 0.24461824369214077 NRMSE: 0.1470574140578692 MAPE: 620.5422396961181 Pearson Correlation: 0.07607581205909651 Spearman Correlation: 0.08772428583897555 Coefficient of Determination: -0.0009309097943495104 RMSE: 0.20983719222611147 NRMSE: 0.19883561750932074 MAPE: 467.64618390592904 Predictor: RandomForests Pearson Correlation: 0.6236816549710236 Spearman Correlation: 0.5986275356684158 Coefficient of Determination: 0.30527983540112846 RMSE: 0.20392077243150597 NRMSE: 0.12259127125530893 MAPE: 472.0578370894177 Pearson Correlation: 0.3464088442810106 Spearman Correlation: 0.3364655419643636 Coefficient of Determination: 0.111115779342157 RMSE: 0.19774386315662015 NRMSE: 0.1873763307748478 MAPE: 330.7920931064097 Protein: ERBB2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.989850711177923e-15 NRMSE: 6.797367346164068e-16 MAPE: 4.104355997999686e-12 Pearson Correlation: 0.7686175858395657 Spearman Correlation: 0.6275746924214561 Coefficient of Determination: 0.589577237120585 RMSE: 0.6832715421154384 NRMSE: 0.12325412044798298 MAPE: 274.3909543951583 Predictor: ElasticNet Pearson Correlation: 0.8411349175279346 Spearman Correlation: 0.6842195323400557 Coefficient of Determination: 0.5640941849300245 RMSE: 0.6478424029566402 NRMSE: 0.11037061569699307 MAPE: 665.4008967075308 Pearson Correlation: 0.8269535322864782 Spearman Correlation: 0.6620589559213564 Coefficient of Determination: 0.5364154157583174 RMSE: 0.7261763588172692 NRMSE: 0.13099364290664356 MAPE: 167.74130559571665 Predictor: RandomForests Pearson Correlation: 0.8565821436770303 Spearman Correlation: 0.7329645447120364 Coefficient of Determination: 0.7240784956234974 RMSE: 0.5154253963896176 NRMSE: 0.08781119927587741 MAPE: 489.70348202070505 Pearson Correlation: 0.8551310426582696 Spearman Correlation: 0.7167488790355965 Coefficient of Determination: 0.7249236489007613 RMSE: 0.5593765300091448 NRMSE: 0.10090492279550199 MAPE: 165.28622323416 Protein: ERBB3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999884408153 Coefficient of Determination: 1.0 RMSE: 2.5961200286397325e-15 NRMSE: 9.413496751622565e-16 MAPE: 2.201284636376799e-12 Pearson Correlation: 0.2653977234575086 Spearman Correlation: 0.24135712415366775 Coefficient of Determination: -0.11354904765420115 RMSE: 0.5220543059881574 NRMSE: 0.14514611968809546 MAPE: 205.3874690312115 Predictor: ElasticNet Pearson Correlation: 0.49236494246076884 Spearman Correlation: 0.4848052581655466 Coefficient of Determination: 0.1547771355066303 RMSE: 0.4146354066977561 NRMSE: 0.15034624790064655 MAPE: 224.2784307206011 Pearson Correlation: 0.3050125505576341 Spearman Correlation: 0.3422960386039726 Coefficient of Determination: 0.05280985150651174 RMSE: 0.4814814868947823 NRMSE: 0.13386570845757484 MAPE: 141.68235185330406 Predictor: RandomForests Pearson Correlation: 0.6419778319496072 Spearman Correlation: 0.6685049881352713 Coefficient of Determination: 0.35692333794928566 RMSE: 0.36166971237965895 NRMSE: 0.13114095747067808 MAPE: 214.15342254938133 Pearson Correlation: 0.35105154344946177 Spearman Correlation: 0.3883165625506553 Coefficient of Determination: 0.10032323329839155 RMSE: 0.46924997647253575 NRMSE: 0.13046499658651164 MAPE: 156.17083838918347 Fold: 4 Protein: RB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.2617569613256101e-15 NRMSE: 4.614383269915193e-16 MAPE: 4.2258766706469215e-12 Pearson Correlation: 0.11508576983456269 Spearman Correlation: 0.12215863040686295 Coefficient of Determination: -0.7769441039771869 RMSE: 0.21979157936977312 NRMSE: 0.2105848114147215 MAPE: 242.96763443819972 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: RandomForests Pearson Correlation: 0.7225760308046884 Spearman Correlation: 0.5083660943085312 Coefficient of Determination: 0.24895265011992895 RMSE: 0.21796680788750722 NRMSE: 0.07971284665283325 MAPE: 190.7419025567395 Pearson Correlation: 0.1394122872202822 Spearman Correlation: 0.07113056272522102 Coefficient of Determination: -0.07045082481136578 RMSE: 0.17059155460927616 NRMSE: 0.16344570824481294 MAPE: 109.8280815398734 Protein: CDH1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 6.409616836696092e-15 NRMSE: 1.020607120266248e-15 MAPE: 4.216430939133191e-12 Pearson Correlation: 0.4976535875137161 Spearman Correlation: 0.45855683986084617 Coefficient of Determination: 0.21073604053559913 RMSE: 1.036277794349141 NRMSE: 0.18799713260570028 MAPE: 466.54812739562567 Predictor: ElasticNet Pearson Correlation: 0.7369480430911902 Spearman Correlation: 0.712714975296675 Coefficient of Determination: 0.4750321647895802 RMSE: 0.8107758815485777 NRMSE: 0.1291003282616123 MAPE: 383.1113279195186 Pearson Correlation: 0.6167463125459768 Spearman Correlation: 0.5009713338071548 Coefficient of Determination: 0.314176455673594 RMSE: 0.9659869321355979 NRMSE: 0.1752452618075538 MAPE: 294.2396008904224 Predictor: RandomForests Pearson Correlation: 0.7714606323149839 Spearman Correlation: 0.7449609359001516 Coefficient of Determination: 0.587415533259798 RMSE: 0.7187716021018196 NRMSE: 0.11445043184959389 MAPE: 179.42789885100794 Pearson Correlation: 0.7749010958895801 Spearman Correlation: 0.5337685850677705 Coefficient of Determination: 0.5329045002768398 RMSE: 0.7972011153945301 NRMSE: 0.14462485312480136 MAPE: 160.26995747528287 Protein: CDH2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999036734615 Coefficient of Determination: 1.0 RMSE: 2.1773190986263157e-15 NRMSE: 7.889409010168548e-16 MAPE: 1.1468372595291595e-11 Pearson Correlation: 0.15457103189773325 Spearman Correlation: 0.1686080873826357 Coefficient of Determination: -0.24035052795236767 RMSE: 0.37116291060585266 NRMSE: 0.19147110654009977 MAPE: 337.53967680277475 Predictor: ElasticNet Pearson Correlation: 0.22608591508182382 Spearman Correlation: 0.22643330187372762 Coefficient of Determination: 0.003163354318614142 RMSE: 0.3787630292725872 NRMSE: 0.13724292676012292 MAPE: 706.7490309114935 Pearson Correlation: 0.11175722950628625 Spearman Correlation: 0.07508572426090102 Coefficient of Determination: -0.05474560645995097 RMSE: 0.3422679363270808 NRMSE: 0.176565110977199 MAPE: 153.23058868503352 Predictor: RandomForests Pearson Correlation: 0.6558018218411404 Spearman Correlation: 0.5976947940878571 Coefficient of Determination: 0.23594672820017382 RMSE: 0.3316022003261343 NRMSE: 0.12015443159871524 MAPE: 850.3682061596894 Pearson Correlation: 0.22183133026028837 Spearman Correlation: 0.15962044414518886 Coefficient of Determination: 0.01019203909541555 RMSE: 0.3315643471513509 NRMSE: 0.17104347073549941 MAPE: 132.6704065554127 Protein: CDH3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 1.1250338616002647e-15 NRMSE: 8.017972986304037e-16 MAPE: 5.283765277024536e-12 Pearson Correlation: 0.25434364733884807 Spearman Correlation: 0.2868888639509221 Coefficient of Determination: -0.15118764273162033 RMSE: 0.2229516283836026 NRMSE: 0.1984367520369569 MAPE: 2116.1131736005837 Predictor: ElasticNet Pearson Correlation: 0.3811535296236886 Spearman Correlation: 0.38097877625842175 Coefficient of Determination: 0.027060574401614912 RMSE: 0.2031049459906879 NRMSE: 0.14475030716157183 MAPE: 169.32262102330284 Pearson Correlation: 0.29666459208442564 Spearman Correlation: 0.284205538722428 Coefficient of Determination: -0.07267175242710255 RMSE: 0.215214243695235 NRMSE: 0.19155013946564872 MAPE: 173.18163650767028 Predictor: RandomForests Pearson Correlation: 0.6799218667479393 Spearman Correlation: 0.6469527986095693 Coefficient of Determination: 0.35359512337925214 RMSE: 0.16555027647493126 NRMSE: 0.11798557269761481 MAPE: 386.07945615794455 Pearson Correlation: 0.43816397651498784 Spearman Correlation: 0.38003715757054335 Coefficient of Determination: 0.12469709569420939 RMSE: 0.1944091824276856 NRMSE: 0.1730327201770169 MAPE: 513.5713598477581 Protein: PTEN x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.985646762721748e-15 NRMSE: 5.775392221297098e-16 MAPE: 4.244530740618712e-12 Pearson Correlation: 0.2461374578069605 Spearman Correlation: 0.2575269018316937 Coefficient of Determination: 0.0026958537350427747 RMSE: 0.7445657180223383 NRMSE: 0.11642025143027726 MAPE: 1683.6215165721146 Predictor: ElasticNet Pearson Correlation: 0.4757754442777441 Spearman Correlation: 0.4451056083658284 Coefficient of Determination: 0.1213661322323698 RMSE: 0.5265883440235065 NRMSE: 0.10186249304075877 MAPE: 258.2737257466966 Pearson Correlation: 0.3077451116890076 Spearman Correlation: 0.33197172034564026 Coefficient of Determination: 0.04798892572455127 RMSE: 0.7274618521908548 NRMSE: 0.1137458919851231 MAPE: 625.755503446965 Predictor: RandomForests Pearson Correlation: 0.6773500887205246 Spearman Correlation: 0.5799112015775666 Coefficient of Determination: 0.3150970444484219 RMSE: 0.4649238143477672 NRMSE: 0.08993419497596858 MAPE: 151.52880426825575 Pearson Correlation: 0.3874255047968377 Spearman Correlation: 0.4052893427598848 Coefficient of Determination: 0.1137195723625486 RMSE: 0.7018992900551726 NRMSE: 0.1097489312884329 MAPE: 178.79443408177806 Protein: BRCA2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999229387699 Coefficient of Determination: 1.0 RMSE: 1.1676218958244794e-15 NRMSE: 7.522125275081201e-16 MAPE: 2.619420386461176e-12 Pearson Correlation: 0.37317484836736986 Spearman Correlation: 0.3449843514258283 Coefficient of Determination: 0.08381139823644379 RMSE: 0.19919568986395217 NRMSE: 0.1935235156210978 MAPE: 627.761280968283 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: RandomForests Pearson Correlation: 0.6664447980817361 Spearman Correlation: 0.5562736763413593 Coefficient of Determination: 0.2665383001962198 RMSE: 0.16425974171431992 NRMSE: 0.10582041663025926 MAPE: 138.79126687280598 Pearson Correlation: 0.41441070938408203 Spearman Correlation: 0.4414693450043019 Coefficient of Determination: 0.10912043172065633 RMSE: 0.19642510511827307 NRMSE: 0.19083182434667212 MAPE: 249.1803900747528 Protein: CDKN2A x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 3.2266093779436647e-15 NRMSE: 7.294245231024447e-16 MAPE: 4.819031024056258e-12 Pearson Correlation: 0.4330004075748272 Spearman Correlation: 0.3513684709285652 Coefficient of Determination: 0.11380047462091869 RMSE: 0.5937062663077594 NRMSE: 0.17888106848682114 MAPE: 300.0044463285157 Predictor: ElasticNet Pearson Correlation: 0.5806651816616148 Spearman Correlation: 0.47254866161310694 Coefficient of Determination: 0.25804477706590556 RMSE: 0.5805234394397486 NRMSE: 0.13123622458228745 MAPE: 210.8300408810504 Pearson Correlation: 0.5190435341231457 Spearman Correlation: 0.3229391887679398 Coefficient of Determination: 0.2080202398008345 RMSE: 0.561258482419641 NRMSE: 0.1691046949140226 MAPE: 121.21320495844712 Predictor: RandomForests Pearson Correlation: 0.7029469523162342 Spearman Correlation: 0.6612963979885785 Coefficient of Determination: 0.4807179094514076 RMSE: 0.48566027759591185 NRMSE: 0.10979095232189709 MAPE: 157.72893381194876 Pearson Correlation: 0.5903117405553691 Spearman Correlation: 0.4731555256299954 Coefficient of Determination: 0.3303788054024617 RMSE: 0.5160840913531727 NRMSE: 0.15549385096510174 MAPE: 132.95188022382933 Protein: TP53 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 2.0234126075944028e-15 NRMSE: 4.862803671219426e-16 MAPE: 6.679820454501117e-12 Pearson Correlation: 0.42000708393947506 Spearman Correlation: 0.40609733288444994 Coefficient of Determination: 0.1345793861425726 RMSE: 0.4017063336149384 NRMSE: 0.1274772574304831 MAPE: 364.2808300178934 Predictor: ElasticNet Pearson Correlation: 0.5283456773114908 Spearman Correlation: 0.5259378751256315 Coefficient of Determination: 0.21657597102046156 RMSE: 0.3984060691656353 NRMSE: 0.09574767343562493 MAPE: 619.5587044465672 Pearson Correlation: 0.46898565993894914 Spearman Correlation: 0.4233394431352012 Coefficient of Determination: 0.18148356203957006 RMSE: 0.39066883207901615 NRMSE: 0.12397462302583655 MAPE: 189.48087075661425 Predictor: RandomForests Pearson Correlation: 0.7065417744632847 Spearman Correlation: 0.6140973281867749 Coefficient of Determination: 0.40404636576236863 RMSE: 0.3474831405030404 NRMSE: 0.08350952667701043 MAPE: 642.2713139627435 Pearson Correlation: 0.5729931561012098 Spearman Correlation: 0.44041197521166103 Coefficient of Determination: 0.27126595160065003 RMSE: 0.36862059185398893 NRMSE: 0.11697784712299725 MAPE: 219.79707795257738 Protein: CTNNB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 2.70527814301179e-15 NRMSE: 6.533856977615183e-16 MAPE: 1.6779650268839892e-12 Pearson Correlation: 0.3759155652985454 Spearman Correlation: 0.34911906632252276 Coefficient of Determination: 0.09141423425091955 RMSE: 0.7648975220033912 NRMSE: 0.1608143810452004 MAPE: 445.5107754463799 Predictor: ElasticNet Pearson Correlation: 0.5884075355483013 Spearman Correlation: 0.5753127987627829 Coefficient of Determination: 0.25620938626379586 RMSE: 0.6135579493369407 NRMSE: 0.1481880855320599 MAPE: 650.4833365896837 Pearson Correlation: 0.39578484340469655 Spearman Correlation: 0.3249791144527987 Coefficient of Determination: 0.052807806595062345 RMSE: 0.780978979263815 NRMSE: 0.1641953955226253 MAPE: 587.3851626964506 Predictor: RandomForests Pearson Correlation: 0.6660930547899048 Spearman Correlation: 0.6646964293196804 Coefficient of Determination: 0.4256293614679202 RMSE: 0.5391707900816562 NRMSE: 0.1302219085309768 MAPE: 471.1659907121157 Pearson Correlation: 0.6654976493148846 Spearman Correlation: 0.4338333395678251 Coefficient of Determination: 0.30078958723017746 RMSE: 0.6710026467651349 NRMSE: 0.14107363694498673 MAPE: 487.000619084844 Protein: CCNE1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.209600485278427e-15 NRMSE: 5.332433538331508e-16 MAPE: 3.56987415854943e-13 Pearson Correlation: 0.767258755454786 Spearman Correlation: 0.5642738687514808 Coefficient of Determination: 0.5610073150791433 RMSE: 0.2995405739861682 NRMSE: 0.12223152451896198 MAPE: 77.73143954842939 Predictor: ElasticNet Pearson Correlation: 0.7237110651544504 Spearman Correlation: 0.6439128624011299 Coefficient of Determination: 0.45614149442046636 RMSE: 0.3722768648056417 NRMSE: 0.08984165475436004 MAPE: 64.34544938846625 Pearson Correlation: 0.691934005510487 Spearman Correlation: 0.5575306425267148 Coefficient of Determination: 0.432243620830039 RMSE: 0.3406497128409251 NRMSE: 0.13900665667221299 MAPE: 90.72842038458948 Predictor: RandomForests Pearson Correlation: 0.864915042734293 Spearman Correlation: 0.7179887524739937 Coefficient of Determination: 0.7417469457788115 RMSE: 0.25653452307887725 NRMSE: 0.06190953087310309 MAPE: 54.652374513447334 Pearson Correlation: 0.8326951434112377 Spearman Correlation: 0.7080843293856951 Coefficient of Determination: 0.6871927367893959 RMSE: 0.2528514393555218 NRMSE: 0.10317940070004156 MAPE: 76.73295374208088 Protein: CCND1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.3083625188093974e-15 NRMSE: 8.358968827445327e-16 MAPE: 4.107887415486625e-12 Pearson Correlation: 0.3539069810003011 Spearman Correlation: 0.2895322884325241 Coefficient of Determination: -0.009486065295677193 RMSE: 0.23008545070760664 NRMSE: 0.1451093912131727 MAPE: 542.0469896484858 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: RandomForests Pearson Correlation: 0.656238065769627 Spearman Correlation: 0.5997805912746115 Coefficient of Determination: 0.29217614716622475 RMSE: 0.20217586015275077 NRMSE: 0.12916769537365402 MAPE: 459.03860084660505 Pearson Correlation: 0.5206422440815077 Spearman Correlation: 0.46997842865871153 Coefficient of Determination: 0.19142906837339524 RMSE: 0.20591977505764983 NRMSE: 0.12986867750860862 MAPE: 522.0283392929606 Protein: ERBB2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999807346924 Coefficient of Determination: 1.0 RMSE: 4.664394850206277e-15 NRMSE: 7.946564305171094e-16 MAPE: 6.131554655454832e-12 Pearson Correlation: 0.739163691696086 Spearman Correlation: 0.5801052134136025 Coefficient of Determination: 0.5436726943431829 RMSE: 0.7002886716197565 NRMSE: 0.1261008880361142 MAPE: 278.0462287268101 Predictor: ElasticNet Pearson Correlation: 0.8458315202965849 Spearman Correlation: 0.6771760203330683 Coefficient of Determination: 0.5759818558668832 RMSE: 0.6386806148968248 NRMSE: 0.1088097543139896 MAPE: 602.9206138566057 Pearson Correlation: 0.7804617141193011 Spearman Correlation: 0.5626336520829472 Coefficient of Determination: 0.452070116505219 RMSE: 0.7673639030571568 NRMSE: 0.1381791160473146 MAPE: 242.4355272666256 Predictor: RandomForests Pearson Correlation: 0.8707214577314464 Spearman Correlation: 0.7286875588781138 Coefficient of Determination: 0.7483362456117535 RMSE: 0.4920416315897412 NRMSE: 0.08382739008633171 MAPE: 330.81098550743536 Pearson Correlation: 0.7891227461982633 Spearman Correlation: 0.6630947096465283 Coefficient of Determination: 0.5837248591838273 RMSE: 0.6688505841975679 NRMSE: 0.12043983581185723 MAPE: 180.9623991684271 Protein: ERBB3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999036734615 Coefficient of Determination: 1.0 RMSE: 2.767524851312647e-15 NRMSE: 7.567353217395452e-16 MAPE: 2.2367735375564248e-12 Pearson Correlation: 0.2753383965318102 Spearman Correlation: 0.3201610992655769 Coefficient of Determination: -0.23437446290672193 RMSE: 0.4272785422265006 NRMSE: 0.21030902766025023 MAPE: 270.2733527005802 Predictor: ElasticNet Pearson Correlation: 0.4823270226878643 Spearman Correlation: 0.4908557501734912 Coefficient of Determination: 0.1530002219022284 RMSE: 0.4396542673662479 NRMSE: 0.12021641406824582 MAPE: 225.22984947777712 Pearson Correlation: 0.3019071334731533 Spearman Correlation: 0.2780458609209591 Coefficient of Determination: 0.08028125435644495 RMSE: 0.3688205730220586 NRMSE: 0.1815356691894149 MAPE: 207.5574865233294 Predictor: RandomForests Pearson Correlation: 0.6404762821648678 Spearman Correlation: 0.6518852299272261 Coefficient of Determination: 0.3543028516203608 RMSE: 0.3838699169965599 NRMSE: 0.10496307738907738 MAPE: 219.6845688342829 Pearson Correlation: 0.3953364072869352 Spearman Correlation: 0.3147146473148045 Coefficient of Determination: 0.14239345721417151 RMSE: 0.35614894476312475 NRMSE: 0.17529861875359912 MAPE: 231.63462602213386 Fold: 5 Protein: RB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.2569605783705482e-15 NRMSE: 6.209573904005711e-16 MAPE: 4.685849140209076e-12 Pearson Correlation: 0.005162044556531194 Spearman Correlation: 0.1413259516951583 Coefficient of Determination: -0.2910477510996765 RMSE: 0.2731181352466641 NRMSE: 0.13770754857847656 MAPE: 458.1262089478881 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: RandomForests Pearson Correlation: 0.6783386625531739 Spearman Correlation: 0.4831347850710659 Coefficient of Determination: 0.27178822706866934 RMSE: 0.1996036468246194 NRMSE: 0.09860719721801346 MAPE: 159.4998818202044 Pearson Correlation: 0.007713217113177628 Spearman Correlation: 0.06058679035898204 Coefficient of Determination: -0.14725946049093253 RMSE: 0.2574602636412438 NRMSE: 0.12981277032513353 MAPE: 247.74130766407612 Protein: CDH1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.654983351375056e-15 NRMSE: 7.412157815634941e-16 MAPE: 1.7937501537879623e-12 Pearson Correlation: 0.47589284158355577 Spearman Correlation: 0.45952443297297974 Coefficient of Determination: 0.1603626298668408 RMSE: 1.0645295757944087 NRMSE: 0.20934289901760214 MAPE: 1675.023384846449 Predictor: ElasticNet Pearson Correlation: 0.7499733116855487 Spearman Correlation: 0.6975207361165818 Coefficient of Determination: 0.48998347032968403 RMSE: 0.80418985645908 NRMSE: 0.12805163154980415 MAPE: 208.63468018730745 Pearson Correlation: 0.5551656626341372 Spearman Correlation: 0.5721991546029253 Coefficient of Determination: 0.2856990968304116 RMSE: 0.9818665203328413 NRMSE: 0.19308696394030428 MAPE: 963.1226955714491 Predictor: RandomForests Pearson Correlation: 0.8033132433941932 Spearman Correlation: 0.7261862820838294 Coefficient of Determination: 0.6379708510845339 RMSE: 0.6775451402747265 NRMSE: 0.10788591768967969 MAPE: 134.74705284936718 Pearson Correlation: 0.6576963458298704 Spearman Correlation: 0.6479407473908653 Coefficient of Determination: 0.423965172160062 RMSE: 0.8817312297755799 NRMSE: 0.17339506199987806 MAPE: 427.48369490819283 Protein: CDH2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 1.7624879600041791e-15 NRMSE: 8.656195471755704e-16 MAPE: 1.3494410323173389e-11 Pearson Correlation: 0.24592464639200706 Spearman Correlation: 0.24533004816793366 Coefficient of Determination: -0.05536825931221445 RMSE: 0.4284828367268554 NRMSE: 0.16023141436600616 MAPE: 1385.265395053987 Predictor: ElasticNet Pearson Correlation: 0.2940630048872455 Spearman Correlation: 0.2956033331756149 Coefficient of Determination: 0.0077267143296005925 RMSE: 0.35774624391198434 NRMSE: 0.17570170615980762 MAPE: 219.14016479600966 Pearson Correlation: -0.017274004721497635 Spearman Correlation: -0.047848536575975265 Coefficient of Determination: -0.01643603651102543 RMSE: 0.4205052703535633 NRMSE: 0.15724819862519426 MAPE: 554.4051908472599 Predictor: RandomForests Pearson Correlation: 0.7042236143798442 Spearman Correlation: 0.6046870643632349 Coefficient of Determination: 0.24733514324737826 RMSE: 0.31157331304101016 NRMSE: 0.15302456315554744 MAPE: 602.654823149021 Pearson Correlation: 0.14740457964469422 Spearman Correlation: 0.15665302142560267 Coefficient of Determination: 0.0024068296222262697 RMSE: 0.4165893373675731 NRMSE: 0.1557838331311157 MAPE: 598.2572302685899 Protein: CDH3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 7.926894100788004e-16 NRMSE: 5.561327735300558e-16 MAPE: 2.2553324866597574e-12 Pearson Correlation: 0.415025190253806 Spearman Correlation: 0.40029676180501006 Coefficient of Determination: 0.09951940734214404 RMSE: 0.21198497124070376 NRMSE: 0.1912548572620682 MAPE: 333.2561430252826 Predictor: ElasticNet Pearson Correlation: 0.4219369997003351 Spearman Correlation: 0.44336861832126473 Coefficient of Determination: 0.038495995167026065 RMSE: 0.19980717627417885 NRMSE: 0.14018014836545073 MAPE: 142.62072814193905 Pearson Correlation: 0.38808231171510443 Spearman Correlation: 0.3715682240426939 Coefficient of Determination: 0.022417802130877962 RMSE: 0.2208739693845166 NRMSE: 0.19927459593150118 MAPE: 117.46963344587202 Predictor: RandomForests Pearson Correlation: 0.6922823249844087 Spearman Correlation: 0.6682510069927864 Coefficient of Determination: 0.35852050699267557 RMSE: 0.1632025432253183 NRMSE: 0.11449917440177801 MAPE: 459.28130362181463 Pearson Correlation: 0.5146513952506371 Spearman Correlation: 0.5286225514033841 Coefficient of Determination: 0.20327343016339394 RMSE: 0.19939880176568023 NRMSE: 0.17989949545347778 MAPE: 150.38669788308155 Protein: PTEN x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.846921452038711e-15 NRMSE: 4.451444690858746e-16 MAPE: 4.393161239619451e-12 Pearson Correlation: 0.40576526294452137 Spearman Correlation: 0.4463172857516927 Coefficient of Determination: 0.1321412574990466 RMSE: 0.6723322705691992 NRMSE: 0.13005498889066838 MAPE: 861.5882131513592 Predictor: ElasticNet Pearson Correlation: 0.4981780173219028 Spearman Correlation: 0.4721463158433759 Coefficient of Determination: 0.10433962103795091 RMSE: 0.5385239152387515 NRMSE: 0.08420356738937558 MAPE: 343.9623390068643 Pearson Correlation: 0.4421083043671192 Spearman Correlation: 0.47583386326512805 Coefficient of Determination: 0.06928613821978102 RMSE: 0.6962537170498454 NRMSE: 0.13468231914458476 MAPE: 421.4086733448666 Predictor: RandomForests Pearson Correlation: 0.630891916778191 Spearman Correlation: 0.5791259976247204 Coefficient of Determination: 0.3194941145079424 RMSE: 0.4694066695450981 NRMSE: 0.07339639895943993 MAPE: 254.19748265721432 Pearson Correlation: 0.4329198321093795 Spearman Correlation: 0.46943770769692306 Coefficient of Determination: 0.15074072013978734 RMSE: 0.6650887260889039 NRMSE: 0.1286538080487666 MAPE: 382.2277784216515 Protein: BRCA2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999884408153 Coefficient of Determination: 1.0 RMSE: 1.2314017588700393e-15 NRMSE: 7.933011814269862e-16 MAPE: 3.7055636538739525e-12 Pearson Correlation: 0.15358161918069055 Spearman Correlation: 0.1222883078342623 Coefficient of Determination: -0.41480555149925036 RMSE: 0.19755383678199406 NRMSE: 0.25835851276007854 MAPE: 407.8958476462129 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: RandomForests Pearson Correlation: 0.6567881160663354 Spearman Correlation: 0.5759082456524208 Coefficient of Determination: 0.28322453311114804 RMSE: 0.16972157715548578 NRMSE: 0.1093390737030026 MAPE: 191.07275278281492 Pearson Correlation: 0.24614851585692804 Spearman Correlation: 0.21492786693100913 Coefficient of Determination: -0.01947728338674537 RMSE: 0.1676972217194141 NRMSE: 0.21931239353876164 MAPE: 175.56127343870628 Protein: CDKN2A x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.894539018715982e-15 NRMSE: 9.91708644729185e-16 MAPE: 2.6093320505028783e-12 Pearson Correlation: 0.38587303571148346 Spearman Correlation: 0.373902417735882 Coefficient of Determination: 0.05813588732616859 RMSE: 0.5880720533756524 NRMSE: 0.147976158973265 MAPE: 391.0830794284555 Predictor: ElasticNet Pearson Correlation: 0.6275002836696595 Spearman Correlation: 0.5004119115233852 Coefficient of Determination: 0.30934668978302493 RMSE: 0.5648580335355993 NRMSE: 0.14383591798925396 MAPE: 202.12123352080403 Pearson Correlation: 0.3174058233703827 Spearman Correlation: 0.27107320540156365 Coefficient of Determination: 0.10041293934798112 RMSE: 0.5747222573237627 NRMSE: 0.14461695914138112 MAPE: 256.1027469593523 Predictor: RandomForests Pearson Correlation: 0.7203526857101258 Spearman Correlation: 0.6864204044917843 Coefficient of Determination: 0.5120398207781955 RMSE: 0.47478987833371167 NRMSE: 0.12090088827218856 MAPE: 132.8985113980911 Pearson Correlation: 0.38009326679491345 Spearman Correlation: 0.3909400366588113 Coefficient of Determination: -0.04885278644631885 RMSE: 0.6205741549261026 NRMSE: 0.156154640025692 MAPE: 466.27245635193685 Protein: TP53 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.8518546429604284e-15 NRMSE: 4.70982131529395e-16 MAPE: 3.687431181739567e-12 Pearson Correlation: 0.4308860673596958 Spearman Correlation: 0.3595431364480854 Coefficient of Determination: 0.17182874037411333 RMSE: 0.4806333478053032 NRMSE: 0.1287353281921262 MAPE: 256.8805220601609 Predictor: ElasticNet Pearson Correlation: 0.499681421962954 Spearman Correlation: 0.49063839023104067 Coefficient of Determination: 0.19397012203911812 RMSE: 0.38047776516554715 NRMSE: 0.0967668977251576 MAPE: 660.6944897487492 Pearson Correlation: 0.47053151167381585 Spearman Correlation: 0.4410104864150426 Coefficient of Determination: 0.153140938398165 RMSE: 0.4860258765574358 NRMSE: 0.13017969105596244 MAPE: 157.95987917686995 Predictor: RandomForests Pearson Correlation: 0.6893294529526489 Spearman Correlation: 0.6139315103305298 Coefficient of Determination: 0.40220749451032034 RMSE: 0.3276641630189653 NRMSE: 0.08333481599709182 MAPE: 747.3058989488107 Pearson Correlation: 0.5210045421947693 Spearman Correlation: 0.43369867454706423 Coefficient of Determination: 0.22370001606296497 RMSE: 0.4653380989820912 NRMSE: 0.12463856943406756 MAPE: 148.96775047854632 Protein: CTNNB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 2.784748359421679e-15 NRMSE: 5.477475136549329e-16 MAPE: 3.1290813554027954e-12 Pearson Correlation: 0.472867800589661 Spearman Correlation: 0.4369854985723014 Coefficient of Determination: 0.08893349895348901 RMSE: 0.6468229738803463 NRMSE: 0.2071563686407996 MAPE: 245.81220445001412 Predictor: ElasticNet Pearson Correlation: 0.5915981448683231 Spearman Correlation: 0.5692442653198941 Coefficient of Determination: 0.2529494429908462 RMSE: 0.6534099737424806 NRMSE: 0.12852281151504338 MAPE: 726.4139854709601 Pearson Correlation: 0.5694425614392808 Spearman Correlation: 0.5425379368820061 Coefficient of Determination: 0.25177708505156793 RMSE: 0.5861731209851194 NRMSE: 0.18773219264253324 MAPE: 247.5423026956574 Predictor: RandomForests Pearson Correlation: 0.6764497961042819 Spearman Correlation: 0.6757458925159587 Coefficient of Determination: 0.44154214348999743 RMSE: 0.5649447341089163 NRMSE: 0.11112209561544381 MAPE: 478.81157285097356 Pearson Correlation: 0.6554897774328055 Spearman Correlation: 0.6109926557687753 Coefficient of Determination: 0.4251964489217177 RMSE: 0.5137716295322111 NRMSE: 0.1645443488905009 MAPE: 188.18027267333912 Protein: CCNE1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 2.2144473931047826e-15 NRMSE: 7.887613154424871e-16 MAPE: 4.249027553294923e-13 Pearson Correlation: 0.5927652321729157 Spearman Correlation: 0.5848875921146149 Coefficient of Determination: 0.33862511505362436 RMSE: 0.5270638851659285 NRMSE: 0.1271964392127636 MAPE: 101.53230606712353 Predictor: ElasticNet Pearson Correlation: 0.7536041036062653 Spearman Correlation: 0.6226009490552836 Coefficient of Determination: 0.48940560191674376 RMSE: 0.320689089810275 NRMSE: 0.11422585567596616 MAPE: 66.51176121250887 Pearson Correlation: 0.6260897661095308 Spearman Correlation: 0.6669035773513385 Coefficient of Determination: 0.2783410111955492 RMSE: 0.5505609723219215 NRMSE: 0.132866996240539 MAPE: 101.96630479902187 Predictor: RandomForests Pearson Correlation: 0.8687728710400541 Spearman Correlation: 0.7129356803074257 Coefficient of Determination: 0.7507582026026061 RMSE: 0.22405601084770027 NRMSE: 0.07980623716748006 MAPE: 52.65717275319447 Pearson Correlation: 0.7637582605397796 Spearman Correlation: 0.7318851797281416 Coefficient of Determination: 0.5529888997183832 RMSE: 0.43330985188758414 NRMSE: 0.10457075847372738 MAPE: 76.5298793004595 Protein: CCND1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.0504326334407992e-15 NRMSE: 6.616148300922095e-16 MAPE: 2.7694709547179737e-12 Pearson Correlation: 0.2542517927327177 Spearman Correlation: 0.2275065773887455 Coefficient of Determination: -0.0015522393961511227 RMSE: 0.27617303840993435 NRMSE: 0.17644359157813874 MAPE: 299.05388894088725 Predictor: ElasticNet Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: RandomForests Pearson Correlation: 0.6208734495060697 Spearman Correlation: 0.6239587824156606 Coefficient of Determination: 0.3199956930136776 RMSE: 0.18769983958713327 NRMSE: 0.11822271464472266 MAPE: 508.3454458854936 Pearson Correlation: 0.3506763727273697 Spearman Correlation: 0.2958116684746693 Coefficient of Determination: 0.11742231666701963 RMSE: 0.25925130173722083 NRMSE: 0.16563250005572433 MAPE: 253.5989973579388 Protein: ERBB2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 4.223139475155749e-15 NRMSE: 7.194813150852256e-16 MAPE: 2.9885521914316616e-12 Pearson Correlation: 0.6923592469484854 Spearman Correlation: 0.539086522275839 Coefficient of Determination: 0.47202550980975577 RMSE: 0.6305016353379769 NRMSE: 0.13950694442703326 MAPE: 384.72297684416986 Predictor: ElasticNet Pearson Correlation: 0.8543222061761966 Spearman Correlation: 0.6776408922025907 Coefficient of Determination: 0.6005309556708296 RMSE: 0.6496822812867385 NRMSE: 0.11068406925170597 MAPE: 647.9056751210943 Pearson Correlation: 0.781521171503636 Spearman Correlation: 0.6188431277197971 Coefficient of Determination: 0.5042358192951741 RMSE: 0.6109663907082383 NRMSE: 0.13518450950508648 MAPE: 368.56858391361584 Predictor: RandomForests Pearson Correlation: 0.8657910284985194 Spearman Correlation: 0.7138574800771907 Coefficient of Determination: 0.7412490306053332 RMSE: 0.5228780970156561 NRMSE: 0.08908088948594581 MAPE: 459.9438647830188 Pearson Correlation: 0.8115021185763847 Spearman Correlation: 0.6524651488075495 Coefficient of Determination: 0.6334670148362188 RMSE: 0.5253349313877418 NRMSE: 0.11623740046194088 MAPE: 196.29549005395032 Protein: ERBB3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999997880816034 Coefficient of Determination: 1.0 RMSE: 2.4857067973843464e-15 NRMSE: 6.708209207966456e-16 MAPE: 1.904781991811625e-12 Pearson Correlation: 0.3612809209480161 Spearman Correlation: 0.34916894225613787 Coefficient of Determination: -0.16484625304972633 RMSE: 0.4500269685535973 NRMSE: 0.2177367229943282 MAPE: 294.28935512687656 Predictor: ElasticNet Pearson Correlation: 0.4297787733796983 Spearman Correlation: 0.42565186153860235 Coefficient of Determination: 0.10766739086726707 RMSE: 0.44294833301678466 NRMSE: 0.11953904174552342 MAPE: 234.59617213964665 Pearson Correlation: 0.5106859864573244 Spearman Correlation: 0.523674858788763 Coefficient of Determination: 0.09923771411228965 RMSE: 0.39573943918584875 NRMSE: 0.1914707665740206 MAPE: 228.72888975989264 Predictor: RandomForests Pearson Correlation: 0.6329913739745635 Spearman Correlation: 0.6291613577089233 Coefficient of Determination: 0.3135641673190068 RMSE: 0.3884987829640403 NRMSE: 0.10484467097670208 MAPE: 232.76281272778817 Pearson Correlation: 0.5348310508544339 Spearman Correlation: 0.5338295988728039 Coefficient of Determination: 0.22560575820839068 RMSE: 0.3669317518037358 NRMSE: 0.17753273199847872 MAPE: 225.93813015453802
TMM
scenario = Scenario.AllmRNA_Mutations
normalizeTechnique = NormalizeTechnique.TMM
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12.2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 6.676054 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SH-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SJ-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SK-01 | 6.676054 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
| TCGA-A1-A0SQ-01 | 5.091092 | 6.676054 | 6.676054 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | 5.091092 | ... | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 6.676054 | 5.091092 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 1.4294529182248745e-15 NRMSE: 5.4135690900392895e-16 MAPE: 5.39996533782468e-12 Pearson Correlation: 0.19190269169550175 Spearman Correlation: 0.2709881962735343 Coefficient of Determination: -0.021001134546316358 RMSE: 0.28339600365102585 NRMSE: 0.1400018790606926 MAPE: 189.4113479772527 Predictor: ElasticNet Pearson Correlation: 0.6924443786042247 Spearman Correlation: 0.6080974434591181 Coefficient of Determination: 0.3299905322984432 RMSE: 0.18343663373378502 NRMSE: 0.06947041610823139 MAPE: 361.4347278274864 Pearson Correlation: 0.23711598753836166 Spearman Correlation: 0.2993854258121159 Coefficient of Determination: 0.015257568539806643 RMSE: 0.2783184103019062 NRMSE: 0.13749347174081314 MAPE: 181.78227352291574 Predictor: RandomForests Pearson Correlation: 0.5802727393634393 Spearman Correlation: 0.37315069316909555 Coefficient of Determination: 0.1606432339248387 RMSE: 0.2053141587773258 NRMSE: 0.07775578821334057 MAPE: 241.15812490623222 Pearson Correlation: 0.21897643897748378 Spearman Correlation: 0.26761779338601116 Coefficient of Determination: -0.010316119737293405 RMSE: 0.2819092008751006 NRMSE: 0.13926737617518786 MAPE: 137.79169580254995 Protein: CDH1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 8.484859135049296e-15 NRMSE: 1.4261945329785514e-15 MAPE: 9.428858691487216e-12 Pearson Correlation: 0.5489169070362411 Spearman Correlation: 0.4539703443566481 Coefficient of Determination: 0.28762832699640184 RMSE: 0.9793222047000186 NRMSE: 0.15861523836286784 MAPE: 330.8328816246175 Predictor: ElasticNet Pearson Correlation: 0.9753548427116583 Spearman Correlation: 0.9577789646190761 Coefficient of Determination: 0.9194525752169774 RMSE: 0.32025877006293496 NRMSE: 0.053831336470330116 MAPE: 205.74062407483765 Pearson Correlation: 0.5504064075763347 Spearman Correlation: 0.47689493707930936 Coefficient of Determination: 0.29111793805645025 RMSE: 0.976920614927499 NRMSE: 0.15822626654910743 MAPE: 352.42532765423465 Predictor: RandomForests Pearson Correlation: 0.652487302515615 Spearman Correlation: 0.6032645009916864 Coefficient of Determination: 0.4185728007641978 RMSE: 0.8604445211587071 NRMSE: 0.14462953980446558 MAPE: 324.105226711044 Pearson Correlation: 0.6668751224722387 Spearman Correlation: 0.5785825773095309 Coefficient of Determination: 0.4323890481979803 RMSE: 0.8741735542588965 NRMSE: 0.1415849104756724 MAPE: 165.58289738961653 Protein: CDH2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999031343205 Coefficient of Determination: 1.0 RMSE: 2.9472620580096887e-15 NRMSE: 1.0888081282106968e-15 MAPE: 1.7144202833121276e-11 Pearson Correlation: 0.21731531740082752 Spearman Correlation: 0.2593259194224954 Coefficient of Determination: -0.03301961317985591 RMSE: 0.38125777006551537 NRMSE: 0.1967578934125589 MAPE: 169.26301090901475 Predictor: ElasticNet Pearson Correlation: 0.8664025423752119 Spearman Correlation: 0.845943130505571 Coefficient of Determination: 0.6074359425247626 RMSE: 0.23257164024169827 NRMSE: 0.08591902833963148 MAPE: 1051.3695696280242 Pearson Correlation: 0.2742739017090112 Spearman Correlation: 0.35354111793971327 Coefficient of Determination: 0.053601405541222724 RMSE: 0.3649231904055215 NRMSE: 0.18832801280152836 MAPE: 155.36052140002346 Predictor: RandomForests Pearson Correlation: 0.5840886949498478 Spearman Correlation: 0.5127510208819773 Coefficient of Determination: 0.1786727563184437 RMSE: 0.3364028010497179 NRMSE: 0.1242774130452212 MAPE: 679.7845247806326 Pearson Correlation: 0.2769807811012407 Spearman Correlation: 0.3138571846649108 Coefficient of Determination: 0.04868182904120921 RMSE: 0.3658704342851608 NRMSE: 0.18881686240654427 MAPE: 102.43023107030578 Protein: CDH3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.0491456985441737e-15 NRMSE: 7.36056644317347e-16 MAPE: 2.444497321419185e-12 Pearson Correlation: 0.33803126591913657 Spearman Correlation: 0.41885181933469906 Coefficient of Determination: 0.04095679425487708 RMSE: 0.2003460705894518 NRMSE: 0.15334446011852323 MAPE: 616.3189033956056 Predictor: ElasticNet Pearson Correlation: 0.7071675701860545 Spearman Correlation: 0.7077368998810509 Coefficient of Determination: 0.4360210610352635 RMSE: 0.15680556243199387 NRMSE: 0.11001119887747227 MAPE: 483.518052785707 Pearson Correlation: 0.4388824429603918 Spearman Correlation: 0.4810750170715053 Coefficient of Determination: 0.18576233550592258 RMSE: 0.18460239722269353 NRMSE: 0.14129428570978678 MAPE: 338.50802373847415 Predictor: RandomForests Pearson Correlation: 0.5656572660818159 Spearman Correlation: 0.5909135229540947 Coefficient of Determination: 0.26395949903520555 RMSE: 0.17913517717075222 NRMSE: 0.12567714624428372 MAPE: 391.74079682938896 Pearson Correlation: 0.4080466388244183 Spearman Correlation: 0.4668276265730173 Coefficient of Determination: 0.1579890371287691 RMSE: 0.18772435270262677 NRMSE: 0.14368382385333964 MAPE: 366.4975676140496 Protein: PTEN x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 5.1392740646559064e-15 NRMSE: 8.035765873904943e-16 MAPE: 1.2256591931393518e-11 Pearson Correlation: 0.07685455008920165 Spearman Correlation: 0.11215491171593019 Coefficient of Determination: -0.40069502457735173 RMSE: 0.5878093920478228 NRMSE: 0.1937279652125182 MAPE: 312.8084607599812 Predictor: ElasticNet Pearson Correlation: 0.9409793697650526 Spearman Correlation: 0.9107534692635139 Coefficient of Determination: 0.8087298893986972 RMSE: 0.27398493987680694 NRMSE: 0.04284026891983534 MAPE: 271.2848903403153 Pearson Correlation: 0.08753560672326466 Spearman Correlation: 0.07753877670471174 Coefficient of Determination: -0.38993894985232713 RMSE: 0.5855481195085332 NRMSE: 0.19298270368088236 MAPE: 296.9017178667318 Predictor: RandomForests Pearson Correlation: 0.5665143330291964 Spearman Correlation: 0.4873910433074623 Coefficient of Determination: 0.24194976338877894 RMSE: 0.5454464643420047 NRMSE: 0.08528597675584469 MAPE: 437.66673286130697 Pearson Correlation: 0.19696193403628637 Spearman Correlation: 0.25073163593795733 Coefficient of Determination: 0.02478061385614061 RMSE: 0.49047388767404665 NRMSE: 0.16164850295763186 MAPE: 169.78956838624563 Protein: BRCA2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999031343205 Coefficient of Determination: 1.0 RMSE: 1.0110238627405102e-15 NRMSE: 6.540203270286508e-16 MAPE: 2.918330638001583e-12 Pearson Correlation: 0.269405564996816 Spearman Correlation: 0.24764931183477568 Coefficient of Determination: -0.027003258728072188 RMSE: 0.18721227142339464 NRMSE: 0.18736216115231652 MAPE: 257.5233181194687 Predictor: ElasticNet Pearson Correlation: 0.653733534698858 Spearman Correlation: 0.6195039403701077 Coefficient of Determination: 0.3202375527535961 RMSE: 0.16292592630780972 NRMSE: 0.1053950075089657 MAPE: 190.55043106799445 Pearson Correlation: 0.38517896325207107 Spearman Correlation: 0.3939400960154329 Coefficient of Determination: 0.13047078857027672 RMSE: 0.1722623985592165 NRMSE: 0.17240031881426793 MAPE: 132.8270066718601 Predictor: RandomForests Pearson Correlation: 0.6157869035201734 Spearman Correlation: 0.5378210223215951 Coefficient of Determination: 0.16937110284840107 RMSE: 0.18010058869819334 NRMSE: 0.11650510958184657 MAPE: 131.36935396777733 Pearson Correlation: 0.09823204892087473 Spearman Correlation: 0.2073873370737776 Coefficient of Determination: 0.0005028088888333615 RMSE: 0.1846882179004939 NRMSE: 0.18483608676990984 MAPE: 115.39391872299112 Protein: CDKN2A x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 3.211167176009204e-15 NRMSE: 7.259335765817122e-16 MAPE: 2.2166094292632657e-12 Pearson Correlation: 0.542244118567343 Spearman Correlation: 0.4887767047117355 Coefficient of Determination: 0.28961701154313857 RMSE: 0.6294892645847802 NRMSE: 0.1699944003739617 MAPE: 927.6903101029402 Predictor: ElasticNet Pearson Correlation: 0.9372683209665438 Spearman Correlation: 0.9308063868035164 Coefficient of Determination: 0.8124085755437669 RMSE: 0.27837148663606265 NRMSE: 0.06293014279101675 MAPE: 108.0310008382721 Pearson Correlation: 0.54683679506067 Spearman Correlation: 0.45779923909862463 Coefficient of Determination: 0.2937879709320137 RMSE: 0.6276385449579521 NRMSE: 0.1694946111147589 MAPE: 1289.0466815610553 Predictor: RandomForests Pearson Correlation: 0.5893796888454105 Spearman Correlation: 0.49298697344568904 Coefficient of Determination: 0.27281136362921377 RMSE: 0.5480772810287637 NRMSE: 0.12390127298039193 MAPE: 141.24834234357505 Pearson Correlation: 0.5820259212738126 Spearman Correlation: 0.3926787630475076 Coefficient of Determination: 0.23930259009723232 RMSE: 0.6514003991094527 NRMSE: 0.17591153095043283 MAPE: 353.7169495262581 Protein: TP53 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.0905445736101985e-15 NRMSE: 5.024139806801727e-16 MAPE: 3.878751234323769e-12 Pearson Correlation: 0.46261116304010674 Spearman Correlation: 0.47394888303580146 Coefficient of Determination: 0.18939183299282403 RMSE: 0.3787159231274253 NRMSE: 0.1361846607671708 MAPE: 575.3197293358629 Predictor: ElasticNet Pearson Correlation: 0.8851129075466547 Spearman Correlation: 0.8238413397561477 Coefficient of Determination: 0.705799621747293 RMSE: 0.2456104278006138 NRMSE: 0.05902677909171204 MAPE: 458.5742343244628 Pearson Correlation: 0.4393202503767859 Spearman Correlation: 0.4956443273826944 Coefficient of Determination: 0.17840783526098247 RMSE: 0.38127314989823846 NRMSE: 0.1371042288101832 MAPE: 676.3879513513057 Predictor: RandomForests Pearson Correlation: 0.6109897794128876 Spearman Correlation: 0.517289464311804 Coefficient of Determination: 0.2882711893903328 RMSE: 0.382016799103889 NRMSE: 0.09180889187788731 MAPE: 550.6680988174357 Pearson Correlation: 0.5054451336058584 Spearman Correlation: 0.4965863044905463 Coefficient of Determination: 0.22819270214082343 RMSE: 0.3695409052087106 NRMSE: 0.13288536272743018 MAPE: 678.3968622377722 Protein: CTNNB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 3.588507896295579e-15 NRMSE: 7.23241609991652e-16 MAPE: 3.1726962941848196e-12 Pearson Correlation: 0.37528038937967534 Spearman Correlation: 0.3397766071602771 Coefficient of Determination: 0.09548375291557143 RMSE: 0.714206337464988 NRMSE: 0.177196034700786 MAPE: 308.2619176177552 Predictor: ElasticNet Pearson Correlation: 0.9526443437630726 Spearman Correlation: 0.9457986750364036 Coefficient of Determination: 0.8529710860793438 RMSE: 0.2826880287868923 NRMSE: 0.05697402680268705 MAPE: 311.8653501961527 Pearson Correlation: 0.3782037053213335 Spearman Correlation: 0.36835918446980787 Coefficient of Determination: 0.11341650686295257 RMSE: 0.7070910399863266 NRMSE: 0.17543071502662796 MAPE: 301.74299639688013 Predictor: RandomForests Pearson Correlation: 0.5699856690506637 Spearman Correlation: 0.5580158081297076 Coefficient of Determination: 0.2272349059151595 RMSE: 0.6480817490285763 NRMSE: 0.13061687506874184 MAPE: 626.0039367585957 Pearson Correlation: 0.49118197380487444 Spearman Correlation: 0.4611403765486295 Coefficient of Determination: 0.17161892357179664 RMSE: 0.6834875342727879 NRMSE: 0.16957463759062866 MAPE: 262.1911957237366 Protein: CCNE1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 2.155889058896826e-15 NRMSE: 5.202811639107141e-16 MAPE: 5.382648878140716e-13 Pearson Correlation: 0.7237836078239267 Spearman Correlation: 0.6064188859623452 Coefficient of Determination: 0.5161807705734086 RMSE: 0.3735495456518455 NRMSE: 0.13305415695524328 MAPE: 49.141413999478566 Predictor: ElasticNet Pearson Correlation: 0.9051826787683485 Spearman Correlation: 0.8343704612375528 Coefficient of Determination: 0.7852484316767491 RMSE: 0.2241394824197312 NRMSE: 0.05409162883889548 MAPE: 44.91375210452847 Pearson Correlation: 0.7002946398109767 Spearman Correlation: 0.6185689201053557 Coefficient of Determination: 0.47567357334192195 RMSE: 0.38887276082231464 NRMSE: 0.13851211427330887 MAPE: 50.97974289632926 Predictor: RandomForests Pearson Correlation: 0.7662975620837719 Spearman Correlation: 0.5834936462301786 Coefficient of Determination: 0.5078432629731204 RMSE: 0.33931410234615245 NRMSE: 0.08188674429764521 MAPE: 80.0311501508387 Pearson Correlation: 0.7343184779020616 Spearman Correlation: 0.6000680537187509 Coefficient of Determination: 0.4339043371443162 RMSE: 0.4040653070017966 NRMSE: 0.14392352876288392 MAPE: 55.6180303352061 Protein: CCND1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.5540351458757707e-15 NRMSE: 9.3424098897198e-16 MAPE: 2.5643563461686166e-12 Pearson Correlation: 0.3164042537647729 Spearman Correlation: 0.32534386889083994 Coefficient of Determination: 0.05799623024276379 RMSE: 0.22803253526288375 NRMSE: 0.1624070816925558 MAPE: 1628.3656603745244 Predictor: ElasticNet Pearson Correlation: 0.7421994858439143 Spearman Correlation: 0.7264076040641042 Coefficient of Determination: 0.40039707819890935 RMSE: 0.184985260000525 NRMSE: 0.11120778877284451 MAPE: 296.39472010950203 Pearson Correlation: 0.23932026869290043 Spearman Correlation: 0.2134279582479758 Coefficient of Determination: 0.050947259218212304 RMSE: 0.22888412363667318 NRMSE: 0.16301359155936498 MAPE: 1530.125096321612 Predictor: RandomForests Pearson Correlation: 0.5806212364348765 Spearman Correlation: 0.5271192219454383 Coefficient of Determination: 0.17212051344913948 RMSE: 0.21736459930375612 NRMSE: 0.1306733111924566 MAPE: 382.9999854631934 Pearson Correlation: 0.2339081207757777 Spearman Correlation: 0.255497024680519 Coefficient of Determination: 0.045443937439629156 RMSE: 0.229546785543244 NRMSE: 0.16348554608230587 MAPE: 1301.117383130796 Protein: ERBB2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 1.4763107358601117e-14 NRMSE: 2.5151383134744736e-15 MAPE: 2.4710704389294762e-11 Pearson Correlation: 0.7052633036762084 Spearman Correlation: 0.6121354014242514 Coefficient of Determination: 0.4965929869350758 RMSE: 0.643555939508429 NRMSE: 0.11933171509520286 MAPE: 466.6589153753931 Predictor: ElasticNet Pearson Correlation: 0.9709680453554395 Spearman Correlation: 0.9277011236612442 Coefficient of Determination: 0.9210513826048988 RMSE: 0.28635506452611603 NRMSE: 0.048785298145751235 MAPE: 309.42460439976975 Pearson Correlation: 0.6518851851986789 Spearman Correlation: 0.6315725295093163 Coefficient of Determination: 0.42302994654777926 RMSE: 0.688974753913008 NRMSE: 0.12775352381105284 MAPE: 843.6971189331215 Predictor: RandomForests Pearson Correlation: 0.7429915805319618 Spearman Correlation: 0.5711912225648204 Coefficient of Determination: 0.5271902668310762 RMSE: 0.7007704952145246 NRMSE: 0.11938778731698803 MAPE: 270.75771712666796 Pearson Correlation: 0.44793484255805444 Spearman Correlation: 0.5422965348464363 Coefficient of Determination: 0.16282158144082437 RMSE: 0.8299189557938087 NRMSE: 0.15388818019540307 MAPE: 891.6478941359337 Protein: ERBB3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 3.990338993839841e-15 NRMSE: 1.0768779652351364e-15 MAPE: 2.793109436824965e-12 Pearson Correlation: 0.33422501088196555 Spearman Correlation: 0.3432596127936568 Coefficient of Determination: 0.02258271882120222 RMSE: 0.46023272055551945 NRMSE: 0.1846722203050845 MAPE: 308.5050671516242 Predictor: ElasticNet Pearson Correlation: 0.8829936537518939 Spearman Correlation: 0.8775236947979456 Coefficient of Determination: 0.6913802225066543 RMSE: 0.25506756446704615 NRMSE: 0.06883541479678587 MAPE: 140.0080847357529 Pearson Correlation: 0.353679288271067 Spearman Correlation: 0.36952537499463506 Coefficient of Determination: 0.09772232662503555 RMSE: 0.4421886497302561 NRMSE: 0.17743188628750003 MAPE: 283.63796746064867 Predictor: RandomForests Pearson Correlation: 0.5733143975609134 Spearman Correlation: 0.5318066010860195 Coefficient of Determination: 0.23710767142421318 RMSE: 0.40102826401100083 NRMSE: 0.10822601829484542 MAPE: 213.19674083009266 Pearson Correlation: 0.3697856292214858 Spearman Correlation: 0.3718934395347604 Coefficient of Determination: 0.10578999249776955 RMSE: 0.44020730810362435 NRMSE: 0.17663685642319285 MAPE: 244.40386750380418 Fold: 2 Protein: RB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 1.8101978380126386e-15 NRMSE: 6.620091566751897e-16 MAPE: 7.831078849169523e-12 Pearson Correlation: 0.09195490815136646 Spearman Correlation: 0.1858160179494684 Coefficient of Determination: -0.17376629042255343 RMSE: 0.2653302466489002 NRMSE: 0.15201512910869602 MAPE: 688.6109584073769 Predictor: ElasticNet Pearson Correlation: 0.7192305614692752 Spearman Correlation: 0.6449840473857581 Coefficient of Determination: 0.37721244504000495 RMSE: 0.1854871565778619 NRMSE: 0.06783468277423271 MAPE: 251.68697596061583 Pearson Correlation: 0.10370513093973033 Spearman Correlation: 0.159555165349722 Coefficient of Determination: -0.04861314647477455 RMSE: 0.2507861760444719 NRMSE: 0.14368242374011522 MAPE: 400.80059049157376 Predictor: RandomForests Pearson Correlation: 0.6260172613391425 Spearman Correlation: 0.42480325419071896 Coefficient of Determination: 0.16861039031200287 RMSE: 0.2143118460601278 NRMSE: 0.07837618711970736 MAPE: 181.55263269807037 Pearson Correlation: 0.12334675369972618 Spearman Correlation: 0.1508291873963516 Coefficient of Determination: 0.0006532358460907828 RMSE: 0.24482403402553402 NRMSE: 0.1402665456025106 MAPE: 188.18002719717077 Protein: CDH1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 9.420422844027497e-15 NRMSE: 1.511257374513114e-15 MAPE: 9.95895709364474e-12 Pearson Correlation: 0.5767144288089868 Spearman Correlation: 0.5619646863720613 Coefficient of Determination: 0.29629225631520273 RMSE: 0.9652238728253519 NRMSE: 0.17141251515278846 MAPE: 255.90305406461388 Predictor: ElasticNet Pearson Correlation: 0.9745023907357465 Spearman Correlation: 0.9512344871559215 Coefficient of Determination: 0.9155497979100228 RMSE: 0.32564913648841354 NRMSE: 0.05224178013770972 MAPE: 135.9418497884897 Pearson Correlation: 0.571684087331603 Spearman Correlation: 0.5524290313140182 Coefficient of Determination: 0.2828134904382318 RMSE: 0.9744239406278264 NRMSE: 0.17304634001559693 MAPE: 245.52168012968986 Predictor: RandomForests Pearson Correlation: 0.6592018587045115 Spearman Correlation: 0.5941446772622085 Coefficient of Determination: 0.4271735599574825 RMSE: 0.8481274354358349 NRMSE: 0.13605958697935908 MAPE: 244.63857155339213 Pearson Correlation: 0.5837163939874828 Spearman Correlation: 0.632586168634621 Coefficient of Determination: 0.29955491376344523 RMSE: 0.9629837002609929 NRMSE: 0.1710146866029112 MAPE: 184.25373230409943 Protein: CDH2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 7.51819407657939e-15 NRMSE: 2.724180765482785e-15 MAPE: 5.163884429902114e-11 Pearson Correlation: 0.13052405719875151 Spearman Correlation: 0.16551555945761393 Coefficient of Determination: -0.11062187509561161 RMSE: 0.40792870563626765 NRMSE: 0.21490630746259168 MAPE: 251.0891679749545 Predictor: ElasticNet Pearson Correlation: 0.8772337100817269 Spearman Correlation: 0.8580034395065126 Coefficient of Determination: 0.612489834677562 RMSE: 0.2291423407505194 NRMSE: 0.08302860379394138 MAPE: 1191.3182390939041 Pearson Correlation: 0.25045116904904186 Spearman Correlation: 0.263749878060677 Coefficient of Determination: 0.051122452935406515 RMSE: 0.37705633414830475 NRMSE: 0.1986420258187121 MAPE: 328.2868324335333 Predictor: RandomForests Pearson Correlation: 0.5408732278421531 Spearman Correlation: 0.45180543970151116 Coefficient of Determination: 0.17216497714210488 RMSE: 0.33491584402642255 NRMSE: 0.12135511414827979 MAPE: 671.9718656083268 Pearson Correlation: 0.26830239169539233 Spearman Correlation: 0.31954931226221833 Coefficient of Determination: 0.05043887603745101 RMSE: 0.37719212648323414 NRMSE: 0.19871356437159693 MAPE: 198.96326336840517 Protein: CDH3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 1.9573511976387578e-15 NRMSE: 1.4730992734707258e-15 MAPE: 7.502409042150913e-12 Pearson Correlation: 0.36056929996775416 Spearman Correlation: 0.3491464247390499 Coefficient of Determination: -0.1388098314227184 RMSE: 0.21121839293697814 NRMSE: 0.17379938528509684 MAPE: 1748.8668023250298 Predictor: ElasticNet Pearson Correlation: 0.7023151208946427 Spearman Correlation: 0.6900586947892275 Coefficient of Determination: 0.43601971888107127 RMSE: 0.15598487148440301 NRMSE: 0.11739395624724586 MAPE: 241.09943422546377 Pearson Correlation: 0.36200535523401434 Spearman Correlation: 0.41035020973563563 Coefficient of Determination: 0.0028305145545544086 RMSE: 0.19764717901814938 NRMSE: 0.1626324191706981 MAPE: 1321.1731269473912 Predictor: RandomForests Pearson Correlation: 0.5951066780764794 Spearman Correlation: 0.5991849721811462 Coefficient of Determination: 0.2775586098398578 RMSE: 0.17654353949125445 NRMSE: 0.1328663757808241 MAPE: 188.7770254477128 Pearson Correlation: 0.3346227736323288 Spearman Correlation: 0.4430592137352453 Coefficient of Determination: -0.0070272146716263695 RMSE: 0.19862171787249586 NRMSE: 0.16343431076482834 MAPE: 896.2508519207942 Protein: PTEN x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 5.086519353292298e-15 NRMSE: 7.953278638561954e-16 MAPE: 1.1198473542647726e-11 Pearson Correlation: 0.13381800689954298 Spearman Correlation: 0.09418593307969955 Coefficient of Determination: -0.16564222329039113 RMSE: 0.5523810580851676 NRMSE: 0.18526330094082627 MAPE: 336.8108910418631 Predictor: ElasticNet Pearson Correlation: 0.9408315271999382 Spearman Correlation: 0.908699219526136 Coefficient of Determination: 0.8017228725449296 RMSE: 0.27774522686436315 NRMSE: 0.0434282271697855 MAPE: 187.82415680813642 Pearson Correlation: 0.07612812162226786 Spearman Correlation: 0.049487854843429914 Coefficient of Determination: -0.2221129433185942 RMSE: 0.5656031430474118 NRMSE: 0.18969786123135626 MAPE: 457.64027647892584 Predictor: RandomForests Pearson Correlation: 0.5657675296977204 Spearman Correlation: 0.46307220631313134 Coefficient of Determination: 0.2356071740091179 RMSE: 0.5453415600707405 NRMSE: 0.08526957393022289 MAPE: 325.6837095271173 Pearson Correlation: 0.0652305365506504 Spearman Correlation: 0.2444691304132273 Coefficient of Determination: -0.004159916902437555 RMSE: 0.512693230482056 NRMSE: 0.17195238478738126 MAPE: 581.2783174246655 Protein: BRCA2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999225074571 Coefficient of Determination: 1.0 RMSE: 1.0296937100257536e-15 NRMSE: 6.633555870676461e-16 MAPE: 1.9460334432539733e-12 Pearson Correlation: 0.18752933172199118 Spearman Correlation: 0.2322846551555946 Coefficient of Determination: -0.07768783426075387 RMSE: 0.20055157877423807 NRMSE: 0.13575272875676936 MAPE: 208.56338567679106 Predictor: ElasticNet Pearson Correlation: 0.646790610172037 Spearman Correlation: 0.6215410524123176 Coefficient of Determination: 0.31366944656654894 RMSE: 0.16181663108141525 NRMSE: 0.10424650093826075 MAPE: 190.03611541257376 Pearson Correlation: 0.30368670155162936 Spearman Correlation: 0.30049263486489125 Coefficient of Determination: 0.08036707069610882 RMSE: 0.18526221486849356 NRMSE: 0.12540340673275 MAPE: 193.76633016237133 Predictor: RandomForests Pearson Correlation: 0.6264796558930592 Spearman Correlation: 0.5431416113505517 Coefficient of Determination: 0.16823750576792484 RMSE: 0.17813782909984788 NRMSE: 0.11476104306641835 MAPE: 142.52124955636378 Pearson Correlation: 0.3073004021704517 Spearman Correlation: 0.30506779826358404 Coefficient of Determination: 0.03863598061196016 RMSE: 0.18941899454502975 NRMSE: 0.12821711773607097 MAPE: 126.75207227052283 Protein: CDKN2A x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 5.9117131750999954e-15 NRMSE: 1.3364334068271717e-15 MAPE: 4.80938969586124e-12 Pearson Correlation: 0.37888515551643004 Spearman Correlation: 0.32424641498390405 Coefficient of Determination: 0.058080269938477036 RMSE: 0.6535832255265923 NRMSE: 0.17656776138064412 MAPE: 292.65613298477626 Predictor: ElasticNet Pearson Correlation: 0.9383352665428477 Spearman Correlation: 0.9276957407310397 Coefficient of Determination: 0.8227706411946032 RMSE: 0.2792590751399819 NRMSE: 0.06313079578161679 MAPE: 295.14489266110735 Pearson Correlation: 0.4120745679491783 Spearman Correlation: 0.3635059994146913 Coefficient of Determination: 0.14201715020704653 RMSE: 0.6237825964138816 NRMSE: 0.1685170186983687 MAPE: 249.42623974286406 Predictor: RandomForests Pearson Correlation: 0.6099917248744625 Spearman Correlation: 0.495995040167387 Coefficient of Determination: 0.29374148797451094 RMSE: 0.5574697545835329 NRMSE: 0.1260245856411287 MAPE: 252.34981686105243 Pearson Correlation: 0.5012414728125999 Spearman Correlation: 0.43128475270705297 Coefficient of Determination: 0.2007709027797736 RMSE: 0.6020458868646146 NRMSE: 0.16264477168376232 MAPE: 148.88516726085652 Protein: TP53 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.9950052189067364e-15 NRMSE: 8.021977283800018e-16 MAPE: 4.738940161809585e-12 Pearson Correlation: 0.42535437145241467 Spearman Correlation: 0.3926641303287485 Coefficient of Determination: 0.12519039823869893 RMSE: 0.3829015194127763 NRMSE: 0.12609962766763586 MAPE: 2739.8902328768772 Predictor: ElasticNet Pearson Correlation: 0.8810663597415146 Spearman Correlation: 0.8272093980784292 Coefficient of Determination: 0.7031985308528155 RMSE: 0.2480572693648913 NRMSE: 0.06644094532339395 MAPE: 305.5372546636079 Pearson Correlation: 0.39621894694749155 Spearman Correlation: 0.3563652326602283 Coefficient of Determination: 0.11513414713732184 RMSE: 0.3850960261334329 NRMSE: 0.12682233694498038 MAPE: 3185.5532818402035 Predictor: RandomForests Pearson Correlation: 0.5670701026352661 Spearman Correlation: 0.5353397533387227 Coefficient of Determination: 0.28297350068209637 RMSE: 0.3855551767089733 NRMSE: 0.10326909781946521 MAPE: 359.33712913654665 Pearson Correlation: 0.354228684070345 Spearman Correlation: 0.35048300520159503 Coefficient of Determination: 0.11632771056978064 RMSE: 0.3848362174660098 NRMSE: 0.126736775058788 MAPE: 1887.9574262872825 Protein: CTNNB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 4.774806759214067e-15 NRMSE: 9.391830761632705e-16 MAPE: 5.611807414494405e-12 Pearson Correlation: 0.4756420428133673 Spearman Correlation: 0.47380255584821 Coefficient of Determination: 0.16275152185951536 RMSE: 0.7013886259655315 NRMSE: 0.17455728477776353 MAPE: 199.43993551598385 Predictor: ElasticNet Pearson Correlation: 0.9514153861653885 Spearman Correlation: 0.9406504170096615 Coefficient of Determination: 0.8477392373966872 RMSE: 0.28289298278760633 NRMSE: 0.055643781036114545 MAPE: 179.65492621010733 Pearson Correlation: 0.421793161239535 Spearman Correlation: 0.4012730465320457 Coefficient of Determination: 0.09765269472087779 RMSE: 0.7281458830505343 NRMSE: 0.1812164662528395 MAPE: 175.91796268050018 Predictor: RandomForests Pearson Correlation: 0.5770883759313966 Spearman Correlation: 0.5434335152425616 Coefficient of Determination: 0.2417911209692999 RMSE: 0.6312808388759573 NRMSE: 0.12417010992839445 MAPE: 547.1036427926027 Pearson Correlation: 0.4150596043483608 Spearman Correlation: 0.4079211784216175 Coefficient of Determination: 0.04168010310546866 RMSE: 0.7503895684759985 NRMSE: 0.18675233779049763 MAPE: 232.40711151024104 Protein: CCNE1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.4503822214157282e-15 NRMSE: 5.913512612920164e-16 MAPE: 4.855615309901304e-13 Pearson Correlation: 0.7209129385377595 Spearman Correlation: 0.5583991805677496 Coefficient of Determination: 0.4679160366975369 RMSE: 0.30510565261377987 NRMSE: 0.16581919065526438 MAPE: 53.124549556529175 Predictor: ElasticNet Pearson Correlation: 0.9137700366729721 Spearman Correlation: 0.8383933541156706 Coefficient of Determination: 0.8045043391806661 RMSE: 0.2267325847737656 NRMSE: 0.05471742278006748 MAPE: 44.67852487227245 Pearson Correlation: 0.69019679093769 Spearman Correlation: 0.5083894254219101 Coefficient of Determination: 0.4419241314616429 RMSE: 0.3124688944445138 NRMSE: 0.16982097426861767 MAPE: 54.60236167979823 Predictor: RandomForests Pearson Correlation: 0.7687749071134671 Spearman Correlation: 0.5783164036127967 Coefficient of Determination: 0.5215222681828381 RMSE: 0.3547122958346919 NRMSE: 0.08560279359864177 MAPE: 81.3664753953483 Pearson Correlation: 0.7248769275889064 Spearman Correlation: 0.5546189056378727 Coefficient of Determination: 0.5146805727089719 RMSE: 0.2913895730530062 NRMSE: 0.15836475907641143 MAPE: 52.64918599662742 Protein: CCND1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.892177213236184e-15 NRMSE: 1.1375222212286639e-15 MAPE: 7.0357510093727144e-12 Pearson Correlation: 0.18988360628493192 Spearman Correlation: 0.24944883426007222 Coefficient of Determination: -0.11755283745076439 RMSE: 0.24888294377813672 NRMSE: 0.19255039903612733 MAPE: 418.3163629911072 Predictor: ElasticNet Pearson Correlation: 0.7371119980535588 Spearman Correlation: 0.6953902070079566 Coefficient of Determination: 0.41407704238024734 RMSE: 0.18274804313292967 NRMSE: 0.109862838689525 MAPE: 519.1751966647723 Pearson Correlation: 0.23005853242530458 Spearman Correlation: 0.2865037557311483 Coefficient of Determination: 0.03839149811189735 RMSE: 0.23086614405182854 NRMSE: 0.17861154921383035 MAPE: 403.64416023539616 Predictor: RandomForests Pearson Correlation: 0.5823871525876009 Spearman Correlation: 0.5102052736735306 Coefficient of Determination: 0.1904531639119803 RMSE: 0.21480949182307518 NRMSE: 0.129137254465544 MAPE: 578.9033315451082 Pearson Correlation: 0.20716009467768262 Spearman Correlation: 0.2522241732513901 Coefficient of Determination: 0.036190430097170934 RMSE: 0.23113021286661067 NRMSE: 0.17881584829068722 MAPE: 388.4139647421837 Protein: ERBB2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 2.0546611481346904e-14 NRMSE: 3.687276614925058e-15 MAPE: 2.3830993052107452e-11 Pearson Correlation: 0.6078110606686493 Spearman Correlation: 0.42796312554872706 Coefficient of Determination: 0.36308799662552793 RMSE: 0.8437184154108878 NRMSE: 0.143741318195289 MAPE: 2367.037584220293 Predictor: ElasticNet Pearson Correlation: 0.9712808523141926 Spearman Correlation: 0.9359309273306124 Coefficient of Determination: 0.9216010742460714 RMSE: 0.2752405572818713 NRMSE: 0.049394425512242934 MAPE: 202.3745352301434 Pearson Correlation: 0.6117141109358143 Spearman Correlation: 0.4268364062042729 Coefficient of Determination: 0.3678202453135153 RMSE: 0.8405781625777015 NRMSE: 0.14320632444208417 MAPE: 1821.5010196612407 Predictor: RandomForests Pearson Correlation: 0.7326599282675058 Spearman Correlation: 0.6040563903236377 Coefficient of Determination: 0.49109730709383237 RMSE: 0.7012530239626102 NRMSE: 0.12584624373465358 MAPE: 330.11833505694284 Pearson Correlation: 0.6011215187609457 Spearman Correlation: 0.4495005968940481 Coefficient of Determination: 0.33328459349628725 RMSE: 0.8632330448378366 NRMSE: 0.14706595649485266 MAPE: 538.2825231885034 Protein: ERBB3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999997868954927 Coefficient of Determination: 1.0 RMSE: 2.715912987066375e-15 NRMSE: 7.329469641007415e-16 MAPE: 1.9377520808541473e-12 Pearson Correlation: 0.21188356888013068 Spearman Correlation: 0.26026729099600043 Coefficient of Determination: -0.03847822193859396 RMSE: 0.527643001346407 NRMSE: 0.19473167576880893 MAPE: 318.0196067741204 Predictor: ElasticNet Pearson Correlation: 0.8902518381588309 Spearman Correlation: 0.8827852436582181 Coefficient of Determination: 0.7074043492431251 RMSE: 0.24078186964143597 NRMSE: 0.06498011578596938 MAPE: 132.72575214476794 Pearson Correlation: 0.3037261419013981 Spearman Correlation: 0.3589357135889182 Coefficient of Determination: 0.08137519358512546 RMSE: 0.4962614838859792 NRMSE: 0.18315002782191372 MAPE: 287.0644207231241 Predictor: RandomForests Pearson Correlation: 0.5552369646575347 Spearman Correlation: 0.5046768210716943 Coefficient of Determination: 0.24329268260380754 RMSE: 0.3872164651525141 NRMSE: 0.10449861020397254 MAPE: 203.9406899232924 Pearson Correlation: 0.2906016516412121 Spearman Correlation: 0.3612720710174618 Coefficient of Determination: 0.08098349787522918 RMSE: 0.49636727396279623 NRMSE: 0.18318907065747816 MAPE: 299.14268170311954 Fold: 3 Protein: RB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.0201965920313504e-14 NRMSE: 7.388079988411902e-15 MAPE: 3.8440295263727986e-11 Pearson Correlation: 0.1784898823840093 Spearman Correlation: 0.19608972680457365 Coefficient of Determination: -0.11959704094705836 RMSE: 0.23454605689203706 NRMSE: 0.1645775551118045 MAPE: 571.869496927308 Predictor: ElasticNet Pearson Correlation: 0.719972352587152 Spearman Correlation: 0.6511421302243032 Coefficient of Determination: 0.3751285675130118 RMSE: 0.1901765318221438 NRMSE: 0.06954963861254528 MAPE: 272.2558353335341 Pearson Correlation: 0.16275227484577406 Spearman Correlation: 0.15871768974675496 Coefficient of Determination: -0.003925896334527668 RMSE: 0.22209976225646147 NRMSE: 0.15584417127893502 MAPE: 225.52351688137358 Predictor: RandomForests Pearson Correlation: 0.5945874707997906 Spearman Correlation: 0.4322000136668119 Coefficient of Determination: 0.18810608535909168 RMSE: 0.21677601633669835 NRMSE: 0.07927736115297629 MAPE: 226.91347799397744 Pearson Correlation: 0.08592849565844277 Spearman Correlation: 0.0556341101509994 Coefficient of Determination: -0.025758770837250644 RMSE: 0.22450182961659523 NRMSE: 0.1575296669917308 MAPE: 228.69763466541326 Protein: CDH1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 9.762489601634425e-14 NRMSE: 1.554487054812653e-14 MAPE: 4.7628013541667764e-11 Pearson Correlation: 0.4113050008599833 Spearman Correlation: 0.3750844773625607 Coefficient of Determination: -0.0896355604425716 RMSE: 0.9828321443485483 NRMSE: 0.19321986087928053 MAPE: 322.31635202996205 Predictor: ElasticNet Pearson Correlation: 0.9759289000815108 Spearman Correlation: 0.9600074579855447 Coefficient of Determination: 0.9260759414847982 RMSE: 0.31939122521236923 NRMSE: 0.05085685570720187 MAPE: 206.93403360413066 Pearson Correlation: 0.36838757297267777 Spearman Correlation: 0.32375715407922795 Coefficient of Determination: -0.12674704958712302 RMSE: 0.9994289671151614 NRMSE: 0.19648271283670063 MAPE: 333.9386655600252 Predictor: RandomForests Pearson Correlation: 0.664274272087953 Spearman Correlation: 0.635519658236577 Coefficient of Determination: 0.43425526352328003 RMSE: 0.8835687357532751 NRMSE: 0.140691177948676 MAPE: 345.9352153787008 Pearson Correlation: 0.5820513951498684 Spearman Correlation: 0.410162796276741 Coefficient of Determination: 0.3064899194524855 RMSE: 0.7840885411965562 NRMSE: 0.15414786717975784 MAPE: 174.98223399323066 Protein: CDH2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 2.9512512833661806e-14 NRMSE: 1.0693714339322345e-14 MAPE: 3.068645514002463e-11 Pearson Correlation: -0.024164387613963056 Spearman Correlation: -0.01856132869487151 Coefficient of Determination: -0.3580588399723992 RMSE: 0.38687366803235523 NRMSE: 0.2038451683100909 MAPE: 5158.0452751563635 Predictor: ElasticNet Pearson Correlation: 0.8702805036902344 Spearman Correlation: 0.8544076788741422 Coefficient of Determination: 0.6291635060529934 RMSE: 0.23215999078688243 NRMSE: 0.0841220344905002 MAPE: 648.5340549743047 Pearson Correlation: 0.05841099977880351 Spearman Correlation: 0.07591865235227373 Coefficient of Determination: -0.153080207067106 RMSE: 0.3564836668721438 NRMSE: 0.18783256416219352 MAPE: 5252.240684645064 Predictor: RandomForests Pearson Correlation: 0.56649155101638 Spearman Correlation: 0.49420352048524674 Coefficient of Determination: 0.19519995915635358 RMSE: 0.3420110513159088 NRMSE: 0.12392602772516445 MAPE: 512.548616159804 Pearson Correlation: -0.007929330801729442 Spearman Correlation: 0.00877567051958254 Coefficient of Determination: -0.032876965230050015 RMSE: 0.337391528494996 NRMSE: 0.17777284575157334 MAPE: 2450.7244429216184 Protein: CDH3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 9.285333610409452e-15 NRMSE: 6.514377848690472e-15 MAPE: 1.0250348626111353e-11 Pearson Correlation: 0.2401867870281438 Spearman Correlation: 0.2526240975573262 Coefficient of Determination: -0.19340704310896228 RMSE: 0.2057357752388437 NRMSE: 0.17895202557154985 MAPE: 370.35470695700707 Predictor: ElasticNet Pearson Correlation: 0.7091114538559835 Spearman Correlation: 0.7131186220034693 Coefficient of Determination: 0.4466935856393016 RMSE: 0.15807517123775724 NRMSE: 0.11090192739922353 MAPE: 412.0206144613644 Pearson Correlation: 0.28144144282210204 Spearman Correlation: 0.2735271013354281 Coefficient of Determination: 0.04946667757960155 RMSE: 0.18361120985523816 NRMSE: 0.15970775079391317 MAPE: 261.58167754637105 Predictor: RandomForests Pearson Correlation: 0.6027347001560738 Spearman Correlation: 0.6005465028093248 Coefficient of Determination: 0.28528440762931284 RMSE: 0.17965836247160608 NRMSE: 0.126044201094184 MAPE: 378.5837120515114 Pearson Correlation: 0.2783276496256021 Spearman Correlation: 0.28039002980087036 Coefficient of Determination: 0.071164704136077 RMSE: 0.1815034457277534 NRMSE: 0.15787438632629658 MAPE: 169.8251937150227 Protein: PTEN x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.0102753901667502e-13 NRMSE: 1.5796659997916506e-14 MAPE: 1.4351741824992348e-10 Pearson Correlation: 0.20700352262533092 Spearman Correlation: 0.25469893639571567 Coefficient of Determination: -0.25189451727155676 RMSE: 0.5269463829312098 NRMSE: 0.12598536387204365 MAPE: 159.52976501266113 Predictor: ElasticNet Pearson Correlation: 0.9404478949707638 Spearman Correlation: 0.9164867447561472 Coefficient of Determination: 0.7992443948140401 RMSE: 0.2819600966730616 NRMSE: 0.0440872639626396 MAPE: 209.4557196304271 Pearson Correlation: 0.1532450539772409 Spearman Correlation: 0.22006508809336775 Coefficient of Determination: -0.2379510084787715 RMSE: 0.524003620947968 NRMSE: 0.12528179145698085 MAPE: 140.2015087752355 Predictor: RandomForests Pearson Correlation: 0.5731731628680163 Spearman Correlation: 0.5065454457604746 Coefficient of Determination: 0.2311440881001121 RMSE: 0.5517931311018727 NRMSE: 0.08627834119331916 MAPE: 372.5186663362547 Pearson Correlation: 0.05203646994614128 Spearman Correlation: 0.07834761031933067 Coefficient of Determination: -0.044759294599445054 RMSE: 0.4813829242592655 NRMSE: 0.11509179081415041 MAPE: 107.03886948460377 Protein: BRCA2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 2.1618836428321825e-14 NRMSE: 1.4570698264040267e-14 MAPE: 4.2155718900166225e-11 Pearson Correlation: 0.25284161195639515 Spearman Correlation: 0.18803476352572976 Coefficient of Determination: -0.0017746697489637864 RMSE: 0.21432134134062583 NRMSE: 0.14741234986183677 MAPE: 401.3206962274694 Predictor: ElasticNet Pearson Correlation: 0.6403141705003899 Spearman Correlation: 0.6234660384224214 Coefficient of Determination: 0.3092582528095703 RMSE: 0.15795234083554124 NRMSE: 0.10645697357691562 MAPE: 148.66621065801803 Pearson Correlation: 0.28161165058569637 Spearman Correlation: 0.27593112133567754 Coefficient of Determination: 0.07699036864487341 RMSE: 0.20572331409537759 NRMSE: 0.14149854122070968 MAPE: 214.28007697635553 Predictor: RandomForests Pearson Correlation: 0.6174330242036334 Spearman Correlation: 0.5379563546770852 Coefficient of Determination: 0.17998008493501272 RMSE: 0.17209981917065947 NRMSE: 0.1159921138561585 MAPE: 141.086862683226 Pearson Correlation: 0.18325756799212228 Spearman Correlation: 0.16565543211261988 Coefficient of Determination: 0.027235892337479695 RMSE: 0.21119525889891777 NRMSE: 0.14526219927155273 MAPE: 140.5106705385261 Protein: CDKN2A x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 8.640535291640837e-14 NRMSE: 2.0173083889710582e-14 MAPE: 8.992909513256361e-12 Pearson Correlation: 0.38448219442677073 Spearman Correlation: 0.37257073030835797 Coefficient of Determination: 0.10801884688483698 RMSE: 0.6200687331460237 NRMSE: 0.19143241429595373 MAPE: 211.6014619279973 Predictor: ElasticNet Pearson Correlation: 0.9426407507948649 Spearman Correlation: 0.9361902396675488 Coefficient of Determination: 0.8309167956136633 RMSE: 0.27451039711435904 NRMSE: 0.06409002547496243 MAPE: 153.68203351173366 Pearson Correlation: 0.4130059168320423 Spearman Correlation: 0.405359169066946 Coefficient of Determination: 0.1363305103656749 RMSE: 0.610148829541433 NRMSE: 0.18836986494440833 MAPE: 177.5511908065097 Predictor: RandomForests Pearson Correlation: 0.6173945117864903 Spearman Correlation: 0.5110418741540663 Coefficient of Determination: 0.31053114025188555 RMSE: 0.5543268193445792 NRMSE: 0.12941885023920882 MAPE: 249.80518885900813 Pearson Correlation: 0.3835206665826785 Spearman Correlation: 0.3268594371500892 Coefficient of Determination: 0.13956968564867767 RMSE: 0.6090035791840513 NRMSE: 0.1880162943978424 MAPE: 111.23637952651664 Protein: TP53 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.934152398711429e-14 NRMSE: 7.051555872894568e-15 MAPE: 1.7904177370872523e-11 Pearson Correlation: 0.4182407484201568 Spearman Correlation: 0.42138430653748804 Coefficient of Determination: 0.12907401793509854 RMSE: 0.4017090890280044 NRMSE: 0.14979698959536875 MAPE: 646.6438879947459 Predictor: ElasticNet Pearson Correlation: 0.8885416459869816 Spearman Correlation: 0.8280189920476281 Coefficient of Determination: 0.7142778315359841 RMSE: 0.2405987339519173 NRMSE: 0.057822334523412 MAPE: 496.1269634433562 Pearson Correlation: 0.41486127100905734 Spearman Correlation: 0.45401314230850764 Coefficient of Determination: 0.1527397877083183 RMSE: 0.3962136567626741 NRMSE: 0.14774774741400912 MAPE: 590.4456255861593 Predictor: RandomForests Pearson Correlation: 0.6006121473334832 Spearman Correlation: 0.5237160689230994 Coefficient of Determination: 0.29765674741611203 RMSE: 0.3772211860387685 NRMSE: 0.090656377322463 MAPE: 668.3303745040081 Pearson Correlation: 0.38601895391135055 Spearman Correlation: 0.4126038842331488 Coefficient of Determination: 0.13385421173668444 RMSE: 0.40060515512522005 NRMSE: 0.1493853335490754 MAPE: 381.9745439450615 Protein: CTNNB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.9985302055615705e-14 NRMSE: 7.864929593944868e-15 MAPE: 2.7696627392280592e-11 Pearson Correlation: 0.2860455096756535 Spearman Correlation: 0.2539857105450193 Coefficient of Determination: -0.12198437914062077 RMSE: 0.6492812898051455 NRMSE: 0.2122597305584182 MAPE: 2245.008718457261 Predictor: ElasticNet Pearson Correlation: 0.9563710523800623 Spearman Correlation: 0.951318494525648 Coefficient of Determination: 0.8673752929964254 RMSE: 0.2801238257787973 NRMSE: 0.05509910027120325 MAPE: 108.97295528238938 Pearson Correlation: 0.2584814338447299 Spearman Correlation: 0.21353134078978542 Coefficient of Determination: -0.17981551892561476 RMSE: 0.6658042071082376 NRMSE: 0.2176613184831925 MAPE: 1391.191611935769 Predictor: RandomForests Pearson Correlation: 0.587704422339374 Spearman Correlation: 0.5870987633676193 Coefficient of Determination: 0.2822279556631948 RMSE: 0.6516750592394037 NRMSE: 0.12818156161278596 MAPE: 307.3400302594514 Pearson Correlation: 0.09021655801771528 Spearman Correlation: 0.10423820745894588 Coefficient of Determination: -0.10041379945556961 RMSE: 0.6430096590732041 NRMSE: 0.21020944099944555 MAPE: 1887.2204935909135 Protein: CCNE1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 0.9999999999999996 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 2.0095819770867088e-14 NRMSE: 4.8497284482146606e-15 MAPE: 1.247098849723982e-12 Pearson Correlation: 0.5768749008307744 Spearman Correlation: 0.5245576628137508 Coefficient of Determination: 0.2069401634846012 RMSE: 0.3249475836302702 NRMSE: 0.14154618792972523 MAPE: 75.45298203309288 Predictor: ElasticNet Pearson Correlation: 0.9176251312930395 Spearman Correlation: 0.8344689172282841 Coefficient of Determination: 0.816094731336348 RMSE: 0.22403679873284688 NRMSE: 0.054066848162957475 MAPE: 43.269474334216405 Pearson Correlation: 0.5542755327236475 Spearman Correlation: 0.5121235925634984 Coefficient of Determination: 0.1828258703891592 RMSE: 0.3298508733531881 NRMSE: 0.14368204615288935 MAPE: 76.64248979071948 Predictor: RandomForests Pearson Correlation: 0.7692462340280366 Spearman Correlation: 0.6050400563934095 Coefficient of Determination: 0.5413702522289774 RMSE: 0.3537963784127247 NRMSE: 0.08538175505290554 MAPE: 68.78792443695771 Pearson Correlation: 0.49164518167664195 Spearman Correlation: 0.43603910081655994 Coefficient of Determination: 0.21943453254343703 RMSE: 0.322377706124036 NRMSE: 0.14042675703447138 MAPE: 93.10714949735866 Protein: CCND1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.2496095572785043e-14 NRMSE: 7.512291287098294e-15 MAPE: 3.3937817057779155e-11 Pearson Correlation: 0.16273082450305915 Spearman Correlation: 0.20728188630780933 Coefficient of Determination: -0.09026801915782334 RMSE: 0.21900148138631992 NRMSE: 0.20751943125498176 MAPE: 310.44009109271013 Predictor: ElasticNet Pearson Correlation: 0.7280654736535319 Spearman Correlation: 0.7147900937867901 Coefficient of Determination: 0.41184814308214346 RMSE: 0.18762955625116343 NRMSE: 0.11279746320902925 MAPE: 574.6713823970641 Pearson Correlation: 0.2030357822022546 Spearman Correlation: 0.19144627738500483 Coefficient of Determination: 0.01724594026094095 RMSE: 0.2079231467601682 NRMSE: 0.19702192372070176 MAPE: 390.32850819514255 Predictor: RandomForests Pearson Correlation: 0.5850423567183053 Spearman Correlation: 0.5364485643175265 Coefficient of Determination: 0.18534134887998233 RMSE: 0.22082302358024425 NRMSE: 0.1327524158542306 MAPE: 585.887282003267 Pearson Correlation: 0.19176725742777345 Spearman Correlation: 0.16676267783887583 Coefficient of Determination: 0.032918690487423574 RMSE: 0.206258526538818 NRMSE: 0.19544457803608156 MAPE: 430.9883227401831 Protein: ERBB2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999807346924 Coefficient of Determination: 1.0 RMSE: 6.97659908069659e-14 NRMSE: 1.18857847602034e-14 MAPE: 4.0905666476478105e-11 Pearson Correlation: 0.7016852262116455 Spearman Correlation: 0.5716362693258341 Coefficient of Determination: 0.49163661535135317 RMSE: 0.7604396344956736 NRMSE: 0.1371743333746435 MAPE: 390.4448439118664 Predictor: ElasticNet Pearson Correlation: 0.973412821392149 Spearman Correlation: 0.9376556540517954 Coefficient of Determination: 0.9229406899723555 RMSE: 0.27238651112563683 NRMSE: 0.04640552517601186 MAPE: 288.25963188930103 Pearson Correlation: 0.6955578037026626 Spearman Correlation: 0.5505212665015895 Coefficient of Determination: 0.48143095920116996 RMSE: 0.768034812831045 NRMSE: 0.13854441388827568 MAPE: 368.60902801654623 Predictor: RandomForests Pearson Correlation: 0.7079603405478924 Spearman Correlation: 0.5536365482353657 Coefficient of Determination: 0.45660423301178643 RMSE: 0.7233211506047943 NRMSE: 0.12322966260708287 MAPE: 496.1897014322007 Pearson Correlation: 0.7294929794621325 Spearman Correlation: 0.6227075716843643 Coefficient of Determination: 0.48057358115539817 RMSE: 0.7686694672146659 NRMSE: 0.13865889804723752 MAPE: 222.46456675169978 Protein: ERBB3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999884408153 Coefficient of Determination: 1.0 RMSE: 2.976903669773317e-14 NRMSE: 1.0794213178189388e-14 MAPE: 1.011121680387461e-11 Pearson Correlation: 0.21064156906113224 Spearman Correlation: 0.23842940685045952 Coefficient of Determination: -0.06730733938303524 RMSE: 0.5110998514965737 NRMSE: 0.1421004661142903 MAPE: 170.34350159845295 Predictor: ElasticNet Pearson Correlation: 0.8748250742979277 Spearman Correlation: 0.8710705030935135 Coefficient of Determination: 0.6913621451359154 RMSE: 0.2505563202681438 NRMSE: 0.0908513890314423 MAPE: 161.93510707185925 Pearson Correlation: 0.20612381997374546 Spearman Correlation: 0.20125188593373985 Coefficient of Determination: -0.04933603386170904 RMSE: 0.5067786381937242 NRMSE: 0.14089904446895785 MAPE: 171.74081563001346 Predictor: RandomForests Pearson Correlation: 0.5895095355046094 Spearman Correlation: 0.5813727349487308 Coefficient of Determination: 0.26097548273261795 RMSE: 0.3877128450624556 NRMSE: 0.14058416280044223 MAPE: 225.51294801623095 Pearson Correlation: 0.24831619431429464 Spearman Correlation: 0.24644945697577278 Coefficient of Determination: 0.04448659503607344 RMSE: 0.48359232419666615 NRMSE: 0.13445258196890697 MAPE: 147.87548939320968 Fold: 4 Protein: RB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.8734656714220395e-14 NRMSE: 6.851468956341573e-15 MAPE: 2.4638603778692658e-11 Pearson Correlation: 0.15743996754919473 Spearman Correlation: 0.03986832753525606 Coefficient of Determination: -0.4027258915024703 RMSE: 0.19528126199763168 NRMSE: 0.18710119763694447 MAPE: 286.0162506853963 Predictor: ElasticNet Pearson Correlation: 0.714990507045299 Spearman Correlation: 0.6429184643284929 Coefficient of Determination: 0.3826627920310589 RMSE: 0.19761410133929475 NRMSE: 0.07226963916738398 MAPE: 317.2030779039607 Pearson Correlation: 0.1963035251447393 Spearman Correlation: 0.14419381787802843 Coefficient of Determination: -0.08353244104382762 RMSE: 0.17163076005230257 NRMSE: 0.16444138279644213 MAPE: 185.83891232328432 Predictor: RandomForests Pearson Correlation: 0.5915853134282962 Spearman Correlation: 0.3888533786473897 Coefficient of Determination: 0.17781258078471562 RMSE: 0.2280563233872316 NRMSE: 0.08340269287128131 MAPE: 190.4863834661721 Pearson Correlation: 0.2050178148687382 Spearman Correlation: 0.08391875210414096 Coefficient of Determination: -0.02645533890429741 RMSE: 0.16704912123774238 NRMSE: 0.16005166255101214 MAPE: 113.018859122386 Protein: CDH1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 5.0480695184432875e-14 NRMSE: 8.03807126913679e-15 MAPE: 1.743094142869646e-11 Pearson Correlation: 0.49347268943967804 Spearman Correlation: 0.5040786044713775 Coefficient of Determination: 0.2234517640459326 RMSE: 1.0278962339502349 NRMSE: 0.18647658538337414 MAPE: 498.58548850898705 Predictor: ElasticNet Pearson Correlation: 0.9742055353490412 Spearman Correlation: 0.9584663105076564 Coefficient of Determination: 0.9181850523006859 RMSE: 0.32007429836583473 NRMSE: 0.0509656218537363 MAPE: 167.477372047281 Pearson Correlation: 0.4749228934179293 Spearman Correlation: 0.4914749560468336 Coefficient of Determination: 0.21343142843496687 RMSE: 1.0345068029150286 NRMSE: 0.18767584683339295 MAPE: 501.9341251587419 Predictor: RandomForests Pearson Correlation: 0.6452770231514636 Spearman Correlation: 0.6334565185458825 Coefficient of Determination: 0.41204624557632596 RMSE: 0.8580370825913094 NRMSE: 0.13662575755410805 MAPE: 244.29245904431954 Pearson Correlation: 0.6240646775296138 Spearman Correlation: 0.44840046685478024 Coefficient of Determination: 0.34245787936407523 RMSE: 0.9458599681662989 NRMSE: 0.17159391316829922 MAPE: 267.9704007713893 Protein: CDH2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999922938767 Coefficient of Determination: 1.0 RMSE: 2.59142608733935e-14 NRMSE: 9.389905382054316e-15 MAPE: 9.391035480130477e-11 Pearson Correlation: 0.181275187591601 Spearman Correlation: 0.19612962755146574 Coefficient of Determination: -0.11887749276288617 RMSE: 0.352519887352738 NRMSE: 0.18185376550324892 MAPE: 405.23441585666706 Predictor: ElasticNet Pearson Correlation: 0.8799271254351113 Spearman Correlation: 0.8635868001272243 Coefficient of Determination: 0.6170258323532429 RMSE: 0.2347687697820534 NRMSE: 0.08506731276978528 MAPE: 1239.2588561363114 Pearson Correlation: 0.33594077466430877 Spearman Correlation: 0.2993179466078131 Coefficient of Determination: 0.08718052632821727 RMSE: 0.3184086094349515 NRMSE: 0.1642568452782342 MAPE: 255.3269369958159 Predictor: RandomForests Pearson Correlation: 0.5044341620183024 Spearman Correlation: 0.4722361376616518 Coefficient of Determination: 0.14894103156383398 RMSE: 0.3499737008570887 NRMSE: 0.12681125474928934 MAPE: 984.2244610929614 Pearson Correlation: 0.35786426950690636 Spearman Correlation: 0.29156223893066 Coefficient of Determination: 0.039857852630268864 RMSE: 0.3265578446804734 NRMSE: 0.16846077580396668 MAPE: 130.7329639417148 Protein: CDH3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 1.7855098265859158e-14 NRMSE: 1.2725101034721523e-14 MAPE: 7.715657327274329e-11 Pearson Correlation: 0.3436704301605278 Spearman Correlation: 0.3122158630406863 Coefficient of Determination: 0.035519158221620994 RMSE: 0.20407245627635873 NRMSE: 0.18163345877882292 MAPE: 715.8454095974769 Predictor: ElasticNet Pearson Correlation: 0.6714240612755232 Spearman Correlation: 0.6695239943239786 Coefficient of Determination: 0.39093350236574476 RMSE: 0.16069780841931963 NRMSE: 0.11452728054172757 MAPE: 397.95670846779257 Pearson Correlation: 0.5063870137514428 Spearman Correlation: 0.47636254816144846 Coefficient of Determination: 0.20234500441146996 RMSE: 0.18558596688269624 NRMSE: 0.16517967040131745 MAPE: 356.433753518026 Predictor: RandomForests Pearson Correlation: 0.5853801030772099 Spearman Correlation: 0.5783956992435827 Coefficient of Determination: 0.26508776645877674 RMSE: 0.17652057631561943 NRMSE: 0.12580396561684468 MAPE: 331.2103020271161 Pearson Correlation: 0.3963746245312749 Spearman Correlation: 0.32740308482649416 Coefficient of Determination: 0.08725870923044055 RMSE: 0.19852327816243276 NRMSE: 0.17669444627021086 MAPE: 393.69881952717935 Protein: PTEN x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.6707691230469937e-14 NRMSE: 3.231911797908917e-15 MAPE: 1.8261624866693286e-11 Pearson Correlation: 0.19229140429265634 Spearman Correlation: 0.16767540742403275 Coefficient of Determination: -0.030961666578703584 RMSE: 0.7570254545182471 NRMSE: 0.11836845508846018 MAPE: 1485.969425013973 Predictor: ElasticNet Pearson Correlation: 0.9172284069976141 Spearman Correlation: 0.8922375802250718 Coefficient of Determination: 0.7552244575670058 RMSE: 0.2779401469988025 NRMSE: 0.05376434288896675 MAPE: 191.53884263749487 Pearson Correlation: 0.18734506306443371 Spearman Correlation: 0.13302160874823876 Coefficient of Determination: -0.02099007587683932 RMSE: 0.7533555363492677 NRMSE: 0.11779462690161327 MAPE: 1235.1775544887935 Predictor: RandomForests Pearson Correlation: 0.6108609034286808 Spearman Correlation: 0.5006154302237753 Coefficient of Determination: 0.18441506433142063 RMSE: 0.5073432303321115 NRMSE: 0.09813974588597019 MAPE: 306.9630112800503 Pearson Correlation: 0.4861128475945757 Spearman Correlation: 0.24553173979725434 Coefficient of Determination: 0.16217735658084775 RMSE: 0.6824412514066464 NRMSE: 0.10670647352148328 MAPE: 563.6178987315425 Protein: BRCA2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999229387699 Coefficient of Determination: 1.0 RMSE: 1.5397166284596287e-14 NRMSE: 9.919256746397995e-15 MAPE: 9.646679933222221e-12 Pearson Correlation: 0.38072590289366603 Spearman Correlation: 0.3969550742527962 Coefficient of Determination: 0.1212312349836282 RMSE: 0.1950854145401067 NRMSE: 0.1895302819754075 MAPE: 296.40196397486403 Predictor: ElasticNet Pearson Correlation: 0.6104620901905028 Spearman Correlation: 0.5844326599838411 Coefficient of Determination: 0.27727460206573595 RMSE: 0.16305310511773993 NRMSE: 0.105043069813329 MAPE: 178.20873179185662 Pearson Correlation: 0.4275452320653933 Spearman Correlation: 0.4239728674921133 Coefficient of Determination: 0.15571056053634091 RMSE: 0.1912199381419932 NRMSE: 0.1857748765114428 MAPE: 170.19796400195014 Predictor: RandomForests Pearson Correlation: 0.5643853613060379 Spearman Correlation: 0.49725879708879756 Coefficient of Determination: 0.1611110719419011 RMSE: 0.1756688048141927 NRMSE: 0.11317043312236605 MAPE: 122.43950462421864 Pearson Correlation: 0.3233367984907669 Spearman Correlation: 0.31943291063479595 Coefficient of Determination: 0.04942443887380765 RMSE: 0.20289942539463404 NRMSE: 0.19712178585133153 MAPE: 139.43452980619583 Protein: CDKN2A x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 4.605791882812224e-14 NRMSE: 1.0412098751694864e-14 MAPE: 2.6030490219323406e-11 Pearson Correlation: 0.4270692551823963 Spearman Correlation: 0.30106859187770424 Coefficient of Determination: 0.15219786042695616 RMSE: 0.5807017439671942 NRMSE: 0.17496286350322213 MAPE: 262.57099508992576 Predictor: ElasticNet Pearson Correlation: 0.9419005023532291 Spearman Correlation: 0.9373011928673592 Coefficient of Determination: 0.8287223506112019 RMSE: 0.27892102886458003 NRMSE: 0.06305437523783881 MAPE: 217.5225074180982 Pearson Correlation: 0.3876062390620906 Spearman Correlation: 0.28279903739448126 Coefficient of Determination: 0.10891519619100631 RMSE: 0.5953404548210197 NRMSE: 0.1793734422479722 MAPE: 242.9220243501648 Predictor: RandomForests Pearson Correlation: 0.5841303154566614 Spearman Correlation: 0.49247417899041607 Coefficient of Determination: 0.2943818432718974 RMSE: 0.566129499216859 NRMSE: 0.12798225369432775 MAPE: 160.61336032015043 Pearson Correlation: 0.461210256546179 Spearman Correlation: 0.3989501115974015 Coefficient of Determination: 0.1758275288611748 RMSE: 0.5725519897603973 NRMSE: 0.17250737865634147 MAPE: 139.86225742259143 Protein: TP53 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.0834418691321273e-14 NRMSE: 2.6038016561694965e-15 MAPE: 1.1084316491015756e-11 Pearson Correlation: 0.37181855531460617 Spearman Correlation: 0.4250452000648387 Coefficient of Determination: 0.08727951482854657 RMSE: 0.4125380015186305 NRMSE: 0.13091457270837475 MAPE: 236.09316807348404 Predictor: ElasticNet Pearson Correlation: 0.8778032117203389 Spearman Correlation: 0.8300480301445032 Coefficient of Determination: 0.7016651457166729 RMSE: 0.24585525700260316 NRMSE: 0.05908561812126969 MAPE: 669.5679952165308 Pearson Correlation: 0.3553585468245344 Spearman Correlation: 0.356206436489233 Coefficient of Determination: 0.0956257574598911 RMSE: 0.41064747214043146 NRMSE: 0.13031463320018769 MAPE: 311.0696634647084 Predictor: RandomForests Pearson Correlation: 0.6232321329835048 Spearman Correlation: 0.5618889825119223 Coefficient of Determination: 0.3013334701042598 RMSE: 0.37623783872998656 NRMSE: 0.09042005256668748 MAPE: 676.9598453728081 Pearson Correlation: 0.3935307504382865 Spearman Correlation: 0.37538763097420075 Coefficient of Determination: 0.1420211315147767 RMSE: 0.39997546978406345 NRMSE: 0.12692798609547581 MAPE: 174.66716648089943 Protein: CTNNB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 1.0152607291674085e-14 NRMSE: 2.4520836855555225e-15 MAPE: 1.491228436676276e-11 Pearson Correlation: 0.4614416289605837 Spearman Correlation: 0.44572874973503407 Coefficient of Determination: 0.18215370679600662 RMSE: 0.7256983479706183 NRMSE: 0.15257302749361246 MAPE: 328.24033285940965 Predictor: ElasticNet Pearson Correlation: 0.9493795286072554 Spearman Correlation: 0.9416494860256698 Coefficient of Determination: 0.841436288823187 RMSE: 0.28329058515414063 NRMSE: 0.06842106684236804 MAPE: 256.860361834987 Pearson Correlation: 0.33918449866627876 Spearman Correlation: 0.3233681217970299 Coefficient of Determination: 0.06552617380284464 RMSE: 0.7757179846069511 NRMSE: 0.16308930800751642 MAPE: 738.7241390196737 Predictor: RandomForests Pearson Correlation: 0.5582750617578321 Spearman Correlation: 0.5478028638843397 Coefficient of Determination: 0.2506386474091865 RMSE: 0.6158513334152568 NRMSE: 0.14874198952160583 MAPE: 592.7381062829761 Pearson Correlation: 0.26204010682406775 Spearman Correlation: 0.26359181535929377 Coefficient of Determination: -0.017187873914523033 RMSE: 0.8093211253279525 NRMSE: 0.17015413449835012 MAPE: 649.875958701129 Protein: CCNE1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.633204949921412e-14 NRMSE: 3.94141697015086e-15 MAPE: 2.6039103353847923e-12 Pearson Correlation: 0.7344829033494444 Spearman Correlation: 0.5456102943926983 Coefficient of Determination: 0.532520016765224 RMSE: 0.30910677625962313 NRMSE: 0.12613514088779204 MAPE: 79.73231312240708 Predictor: ElasticNet Pearson Correlation: 0.910716575646885 Spearman Correlation: 0.8303363002034145 Coefficient of Determination: 0.7974622532130229 RMSE: 0.22718312668020443 NRMSE: 0.05482615215392148 MAPE: 40.60837337232597 Pearson Correlation: 0.7234854670583893 Spearman Correlation: 0.5115001433933092 Coefficient of Determination: 0.5187070529637499 RMSE: 0.31364023071044744 NRMSE: 0.1279850774138772 MAPE: 81.53996350435804 Predictor: RandomForests Pearson Correlation: 0.7590222363982335 Spearman Correlation: 0.5985104085489557 Coefficient of Determination: 0.5310643995978486 RMSE: 0.34568432544606376 NRMSE: 0.08342407158965749 MAPE: 72.34118303265376 Pearson Correlation: 0.6183449733795479 Spearman Correlation: 0.48154157461351754 Coefficient of Determination: 0.36672679903615435 RMSE: 0.35976803225279985 NRMSE: 0.14680814178274704 MAPE: 94.93007274490412 Protein: CCND1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.745176688380324e-14 NRMSE: 2.3927477852188982e-14 MAPE: 8.822423853325905e-11 Pearson Correlation: 0.24250172107732046 Spearman Correlation: 0.18189503609770696 Coefficient of Determination: -0.032519837311686395 RMSE: 0.23269561275288683 NRMSE: 0.14675555799248666 MAPE: 463.24157716222805 Predictor: ElasticNet Pearson Correlation: 0.7244671864801474 Spearman Correlation: 0.7254165149684304 Coefficient of Determination: 0.40078016504621194 RMSE: 0.1860200654837709 NRMSE: 0.11884595487137328 MAPE: 451.0340108991803 Pearson Correlation: 0.211358243298499 Spearman Correlation: 0.18867317547600343 Coefficient of Determination: 0.030462174280066145 RMSE: 0.2254869289476303 NRMSE: 0.142209213513894 MAPE: 491.58302090399434 Predictor: RandomForests Pearson Correlation: 0.5998864169185738 Spearman Correlation: 0.5633458890474765 Coefficient of Determination: 0.17943514151045448 RMSE: 0.21768232109141133 NRMSE: 0.13907458446187201 MAPE: 561.0176079462785 Pearson Correlation: 0.22142807071093604 Spearman Correlation: 0.21734684971134302 Coefficient of Determination: 0.04039488505927724 RMSE: 0.2243289223862269 NRMSE: 0.1414788864696184 MAPE: 508.248630091338 Protein: ERBB2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 2.1720910143531985e-13 NRMSE: 3.700514531156956e-14 MAPE: 1.1387912636416746e-10 Pearson Correlation: 0.6678781865892933 Spearman Correlation: 0.5481870698978936 Coefficient of Determination: 0.4410922708640753 RMSE: 0.7750128981194102 NRMSE: 0.13955646957168766 MAPE: 388.44041054553065 Predictor: ElasticNet Pearson Correlation: 0.9724452507662157 Spearman Correlation: 0.9357397962840158 Coefficient of Determination: 0.9212323079136315 RMSE: 0.27527424151807206 NRMSE: 0.04689749757535684 MAPE: 265.49802250109843 Pearson Correlation: 0.6689429124712951 Spearman Correlation: 0.5601697778901572 Coefficient of Determination: 0.42999756875916884 RMSE: 0.7826673672008984 NRMSE: 0.14093480880197687 MAPE: 443.8616897523736 Predictor: RandomForests Pearson Correlation: 0.6941206717718683 Spearman Correlation: 0.5760262766525102 Coefficient of Determination: 0.44682535176410043 RMSE: 0.7294955525124106 NRMSE: 0.12428157359190599 MAPE: 399.8565528393482 Pearson Correlation: 0.7417331282986334 Spearman Correlation: 0.5473391779692006 Coefficient of Determination: 0.39758785488611625 RMSE: 0.8046105672790306 NRMSE: 0.14488611792398 MAPE: 178.46632615403558 Protein: ERBB3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999036734615 Coefficient of Determination: 1.0 RMSE: 3.3220605006927045e-14 NRMSE: 9.083642087757827e-15 MAPE: 3.28075805266648e-11 Pearson Correlation: 0.2839232701178569 Spearman Correlation: 0.26168655469519575 Coefficient of Determination: -0.19597454744187082 RMSE: 0.4205799719075574 NRMSE: 0.20701195169863087 MAPE: 348.3844712043581 Predictor: ElasticNet Pearson Correlation: 0.8897750324088726 Spearman Correlation: 0.8902513743245069 Coefficient of Determination: 0.7109444334247017 RMSE: 0.25683861141328324 NRMSE: 0.0702284025203184 MAPE: 136.72164906259482 Pearson Correlation: 0.32936504406118355 Spearman Correlation: 0.28177159316200956 Coefficient of Determination: -0.03486324952992348 RMSE: 0.39122725392894736 NRMSE: 0.19256437016294345 MAPE: 320.5543588995331 Predictor: RandomForests Pearson Correlation: 0.5859868800857304 Spearman Correlation: 0.5523233740614183 Coefficient of Determination: 0.24881103367043866 RMSE: 0.4140418541055803 NRMSE: 0.11321311009424731 MAPE: 221.35363695555844 Pearson Correlation: 0.2526270156418666 Spearman Correlation: 0.2148829785907555 Coefficient of Determination: 0.046194347788509504 RMSE: 0.37559306512491947 NRMSE: 0.18486912989064141 MAPE: 265.5812488207622 Fold: 5 Protein: RB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.550258404032589e-14 NRMSE: 1.7538809344948887e-14 MAPE: 1.0777368793989548e-10 Pearson Correlation: 0.10090426946215765 Spearman Correlation: 0.12122595044825996 Coefficient of Determination: -0.22018619025853536 RMSE: 0.2655170648559703 NRMSE: 0.13387505034788655 MAPE: 1099.9451486824862 Predictor: ElasticNet Pearson Correlation: 0.6927822393491666 Spearman Correlation: 0.6282362970015206 Coefficient of Determination: 0.35848257668249206 RMSE: 0.18734575277266993 NRMSE: 0.09255161358771974 MAPE: 188.74241159680776 Pearson Correlation: 0.05544953049548114 Spearman Correlation: 0.05889599620942905 Coefficient of Determination: -0.143934956092012 RMSE: 0.2570869615326285 NRMSE: 0.12962454950922114 MAPE: 494.71721383431094 Predictor: RandomForests Pearson Correlation: 0.5851640614410759 Spearman Correlation: 0.41265489451107906 Coefficient of Determination: 0.1908250862335411 RMSE: 0.21040731234556062 NRMSE: 0.10394437012867144 MAPE: 133.59792841559727 Pearson Correlation: -0.013732716553735745 Spearman Correlation: 0.10793401413982717 Coefficient of Determination: -0.1328700748731806 RMSE: 0.25584058430608403 NRMSE: 0.1289961197921082 MAPE: 221.44681481608063 Protein: CDH1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.2599364564154546e-13 NRMSE: 2.0062043508414612e-14 MAPE: 7.868179447612998e-12 Pearson Correlation: 0.4868133369414718 Spearman Correlation: 0.5155550567962195 Coefficient of Determination: 0.21005211722152883 RMSE: 1.0325499542937624 NRMSE: 0.20305401158163308 MAPE: 915.8156115841999 Predictor: ElasticNet Pearson Correlation: 0.9751767405038736 Spearman Correlation: 0.9552413752207851 Coefficient of Determination: 0.9207717164492926 RMSE: 0.3169615548115958 NRMSE: 0.0504699778369472 MAPE: 100.80553197525401 Pearson Correlation: 0.45869860037598675 Spearman Correlation: 0.4764872379954863 Coefficient of Determination: 0.17392919496926817 RMSE: 1.0558944056321715 NRMSE: 0.2076447671888796 MAPE: 418.37049007461235 Predictor: RandomForests Pearson Correlation: 0.688672570593429 Spearman Correlation: 0.6215991692027236 Coefficient of Determination: 0.4682146560856105 RMSE: 0.8211729726127401 NRMSE: 0.13075586328663738 MAPE: 148.10585288509998 Pearson Correlation: 0.4563657776723113 Spearman Correlation: 0.5439501040542191 Coefficient of Determination: 0.1805552396901754 RMSE: 1.051651131401861 NRMSE: 0.2068103147237736 MAPE: 524.5917947395043 Protein: CDH2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 4.34212814747727e-14 NRMSE: 2.1325711642243847e-14 MAPE: 1.1849889261642439e-10 Pearson Correlation: 0.23325162366616697 Spearman Correlation: 0.21924739616146444 Coefficient of Determination: -0.013870037331307206 RMSE: 0.4199741508355884 NRMSE: 0.15704958616217804 MAPE: 3447.967925212187 Predictor: ElasticNet Pearson Correlation: 0.8443789598311967 Spearman Correlation: 0.8307695704314217 Coefficient of Determination: 0.5804362840764699 RMSE: 0.23262607580941233 NRMSE: 0.11425081077030219 MAPE: 1980.0282141290434 Pearson Correlation: 0.23799002639692182 Spearman Correlation: 0.24446968724028936 Coefficient of Determination: 0.027669177053866956 RMSE: 0.41128080688433066 NRMSE: 0.1537987049658137 MAPE: 879.5612341761988 Predictor: RandomForests Pearson Correlation: 0.591244008373781 Spearman Correlation: 0.5262253621762218 Coefficient of Determination: 0.17704941410437602 RMSE: 0.32579642347440146 NRMSE: 0.16001003068336594 MAPE: 627.9709965529145 Pearson Correlation: 0.22548662697188548 Spearman Correlation: 0.25571672429442227 Coefficient of Determination: 0.02934489315550648 RMSE: 0.4109262531419578 NRMSE: 0.15366611938072203 MAPE: 2561.75470442884 Protein: CDH3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 2.7203594578349895e-14 NRMSE: 1.908542022952089e-14 MAPE: 1.3253672814075926e-11 Pearson Correlation: 0.41584955760442394 Spearman Correlation: 0.4188456215164778 Coefficient of Determination: 0.12718205361452684 RMSE: 0.20870349772873292 NRMSE: 0.18829428064916945 MAPE: 263.9371064170488 Predictor: ElasticNet Pearson Correlation: 0.6654228243292798 Spearman Correlation: 0.6713455547432661 Coefficient of Determination: 0.3859014478456263 RMSE: 0.15968148774849872 NRMSE: 0.11202888235147522 MAPE: 358.4771789757274 Pearson Correlation: 0.5094434089412834 Spearman Correlation: 0.5275552064240203 Coefficient of Determination: 0.22852320379565494 RMSE: 0.1962137003204482 NRMSE: 0.17702586663579442 MAPE: 241.11730121694058 Predictor: RandomForests Pearson Correlation: 0.5979134559355084 Spearman Correlation: 0.6021669578906818 Coefficient of Determination: 0.2655329544008367 RMSE: 0.17463114066638302 NRMSE: 0.12251721717066778 MAPE: 361.6987808821643 Pearson Correlation: 0.45118671612740485 Spearman Correlation: 0.4756742602775596 Coefficient of Determination: 0.15840933872629792 RMSE: 0.20493604364179546 NRMSE: 0.18489524773932953 MAPE: 143.17733332730862 Protein: PTEN x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 7.326260095379045e-14 NRMSE: 1.145533593210702e-14 MAPE: 2.635646053031355e-11 Pearson Correlation: 0.34625983380299985 Spearman Correlation: 0.3868551976957319 Coefficient of Determination: 0.09993044698387155 RMSE: 0.6846954960581926 NRMSE: 0.13244651347458072 MAPE: 1051.269018693539 Predictor: ElasticNet Pearson Correlation: 0.9342944877706155 Spearman Correlation: 0.9035059351979041 Coefficient of Determination: 0.7660147582110262 RMSE: 0.2752501384518226 NRMSE: 0.04303809529385077 MAPE: 122.30971320634356 Pearson Correlation: 0.29611741986744405 Spearman Correlation: 0.3438372049526803 Coefficient of Determination: 0.06419538363353128 RMSE: 0.6981552806519415 NRMSE: 0.13505015487696176 MAPE: 1005.9493906533388 Predictor: RandomForests Pearson Correlation: 0.502858580258294 Spearman Correlation: 0.45441028915337406 Coefficient of Determination: 0.18077904485761176 RMSE: 0.5150315565001401 NRMSE: 0.08053030357284655 MAPE: 322.584423932719 Pearson Correlation: 0.15540894311895845 Spearman Correlation: 0.4274841332186188 Coefficient of Determination: 0.01803438125795276 RMSE: 0.715167181421278 NRMSE: 0.13834091253119737 MAPE: 466.6141736770525 Protein: BRCA2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999884408153 Coefficient of Determination: 1.0 RMSE: 4.906688732364106e-15 NRMSE: 3.1610170606307657e-15 MAPE: 1.8075374876119418e-11 Pearson Correlation: 0.10890826196628149 Spearman Correlation: 0.10125063903539945 Coefficient of Determination: -0.33441884402511635 RMSE: 0.19185944075190692 NRMSE: 0.2509114506661962 MAPE: 395.35703301985683 Predictor: ElasticNet Pearson Correlation: 0.6884608144650187 Spearman Correlation: 0.6702012215284785 Coefficient of Determination: 0.357169228511516 RMSE: 0.16072884414165156 NRMSE: 0.10354572017500503 MAPE: 157.27688201506967 Pearson Correlation: 0.22795253249491007 Spearman Correlation: 0.1951670220326937 Coefficient of Determination: -0.032186554779524146 RMSE: 0.16873927932631566 NRMSE: 0.22067518384400137 MAPE: 223.6725636010969 Predictor: RandomForests Pearson Correlation: 0.5989306374473484 Spearman Correlation: 0.5054271531275375 Coefficient of Determination: 0.16986989310189926 RMSE: 0.182649536808515 NRMSE: 0.11766760303334838 MAPE: 119.19877175346936 Pearson Correlation: 0.14263604831054488 Spearman Correlation: 0.10465217770795149 Coefficient of Determination: -0.06144114664888334 RMSE: 0.17111380576314958 NRMSE: 0.22378056073124902 MAPE: 127.05407106886433 Protein: CDKN2A x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 5.5960737655375885e-14 NRMSE: 1.4249888634202308e-14 MAPE: 2.9025829024259823e-11 Pearson Correlation: 0.30452099137944755 Spearman Correlation: 0.26577139365827507 Coefficient of Determination: -0.026830858026834825 RMSE: 0.6140247431789992 NRMSE: 0.15450661613421887 MAPE: 466.5441647211301 Predictor: ElasticNet Pearson Correlation: 0.9393784457304648 Spearman Correlation: 0.9376664835563477 Coefficient of Determination: 0.8339532056309279 RMSE: 0.27696475634691603 NRMSE: 0.07052653519057728 MAPE: 175.27776604474118 Pearson Correlation: 0.3065161100876846 Spearman Correlation: 0.309472686691854 Coefficient of Determination: -0.049111530413650684 RMSE: 0.6206506956567601 NRMSE: 0.15617389991614708 MAPE: 433.325521891994 Predictor: RandomForests Pearson Correlation: 0.6308063340752029 Spearman Correlation: 0.5119038715717368 Coefficient of Determination: 0.3414602844130663 RMSE: 0.5515695047228303 NRMSE: 0.1404521159947112 MAPE: 224.74772591117832 Pearson Correlation: 0.2644456965127256 Spearman Correlation: 0.20199030161277268 Coefficient of Determination: 0.05143557681130717 RMSE: 0.590160084164398 NRMSE: 0.1485015686984218 MAPE: 218.86026729327708 Protein: TP53 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 7.60415329595604e-14 NRMSE: 1.9339640621470637e-14 MAPE: 2.141112094183201e-10 Pearson Correlation: 0.453113043028612 Spearman Correlation: 0.3928153717627402 Coefficient of Determination: 0.2032623006410057 RMSE: 0.4714238022630313 NRMSE: 0.1262685957581442 MAPE: 212.18257715043225 Predictor: ElasticNet Pearson Correlation: 0.8690530895794436 Spearman Correlation: 0.8241899738026505 Coefficient of Determination: 0.6802279409943315 RMSE: 0.23964808801169604 NRMSE: 0.06094969048340397 MAPE: 475.5309254591967 Pearson Correlation: 0.4022214130035799 Spearman Correlation: 0.3505953939575307 Coefficient of Determination: 0.16043153142125854 RMSE: 0.48392926076133097 NRMSE: 0.1296181226091686 MAPE: 202.6214750828584 Predictor: RandomForests Pearson Correlation: 0.6002144700828107 Spearman Correlation: 0.5359284780867825 Coefficient of Determination: 0.28099480807390886 RMSE: 0.35935171754912837 NRMSE: 0.09139391071724316 MAPE: 748.4601992655959 Pearson Correlation: 0.41447179970327475 Spearman Correlation: 0.38550355989476176 Coefficient of Determination: 0.14183905283291032 RMSE: 0.48925829351078615 NRMSE: 0.1310454783743903 MAPE: 160.82757915470404 Protein: CTNNB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 3.517919251943433e-14 NRMSE: 6.919589401934369e-15 MAPE: 1.606681418967751e-11 Pearson Correlation: 0.5113478114417667 Spearman Correlation: 0.48739510467711566 Coefficient of Determination: 0.22291582709208768 RMSE: 0.5973714042997138 NRMSE: 0.1913186387029531 MAPE: 267.56478999794354 Predictor: ElasticNet Pearson Correlation: 0.9543874819451486 Spearman Correlation: 0.9477676854322018 Coefficient of Determination: 0.8556760706041385 RMSE: 0.2871970235470684 NRMSE: 0.056490366551350986 MAPE: 249.13481784833604 Pearson Correlation: 0.43148432177790247 Spearman Correlation: 0.42354892205638484 Coefficient of Determination: 0.14073896543320508 RMSE: 0.6281638744545757 NRMSE: 0.20118046575045898 MAPE: 264.86946700961226 Predictor: RandomForests Pearson Correlation: 0.5598834996390453 Spearman Correlation: 0.5372933687365483 Coefficient of Determination: 0.23645823578742553 RMSE: 0.6605826469893211 NRMSE: 0.12993364417571227 MAPE: 649.2230232838077 Pearson Correlation: 0.48652161582980963 Spearman Correlation: 0.4690956246337237 Coefficient of Determination: 0.199043621749872 RMSE: 0.6064776903041054 NRMSE: 0.1942350860411753 MAPE: 247.13609514238377 Protein: CCNE1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 2.3262981980826003e-14 NRMSE: 8.286013172155299e-15 MAPE: 2.9941971348597504e-12 Pearson Correlation: 0.5617275477654535 Spearman Correlation: 0.6397561066846221 Coefficient of Determination: 0.3075055332955613 RMSE: 0.5393212883702625 NRMSE: 0.13015452092821936 MAPE: 91.76218018376468 Predictor: ElasticNet Pearson Correlation: 0.9101258461872974 Spearman Correlation: 0.8313689912083931 Coefficient of Determination: 0.8023996626097469 RMSE: 0.19949866923781154 NRMSE: 0.0710591876180985 MAPE: 42.236168808839345 Pearson Correlation: 0.5659879986276343 Spearman Correlation: 0.6212920360603 Coefficient of Determination: 0.31007420381744377 RMSE: 0.5383201065488424 NRMSE: 0.1299129055068761 MAPE: 87.30101587427443 Predictor: RandomForests Pearson Correlation: 0.7314817533685076 Spearman Correlation: 0.6286541816353323 Coefficient of Determination: 0.5164309320125826 RMSE: 0.3120868132813945 NRMSE: 0.11116182129346197 MAPE: 67.32664783075766 Pearson Correlation: 0.4695509190983272 Spearman Correlation: 0.5526674301301315 Coefficient of Determination: 0.2133599604033829 RMSE: 0.5748141275998707 NRMSE: 0.13872001534857029 MAPE: 101.91360997158331 Protein: CCND1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.439832580843623e-14 NRMSE: 9.06878326138531e-15 MAPE: 2.2942224647417306e-11 Pearson Correlation: 0.22350799037483224 Spearman Correlation: 0.1880846394593449 Coefficient of Determination: -0.013087310495129012 RMSE: 0.2777588546267737 NRMSE: 0.17745675025029944 MAPE: 248.53981777788698 Predictor: ElasticNet Pearson Correlation: 0.7043070816751593 Spearman Correlation: 0.7076365633790639 Coefficient of Determination: 0.3727165453814819 RMSE: 0.18027686041011698 NRMSE: 0.1135473523695688 MAPE: 591.7577400892039 Pearson Correlation: 0.1610337033493522 Spearman Correlation: 0.14557538123916758 Coefficient of Determination: 0.013541156403337196 RMSE: 0.27408417440382393 NRMSE: 0.17510904179848452 MAPE: 249.9016338170588 Predictor: RandomForests Pearson Correlation: 0.5510781482622605 Spearman Correlation: 0.5344215739994496 Coefficient of Determination: 0.1760318275939956 RMSE: 0.20661568525985446 NRMSE: 0.13013685708697878 MAPE: 631.0165585559847 Pearson Correlation: 0.16856647250865262 Spearman Correlation: 0.13858277534632604 Coefficient of Determination: 0.024521853937404692 RMSE: 0.2725544310364575 NRMSE: 0.1741317073871133 MAPE: 273.31541880370554 Protein: ERBB2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.243810513114713e-14 NRMSE: 5.526365083589813e-15 MAPE: 1.0331710759007236e-11 Pearson Correlation: 0.7151169746207853 Spearman Correlation: 0.6096160800009975 Coefficient of Determination: 0.5090313494436269 RMSE: 0.6080042692084827 NRMSE: 0.13452910038908789 MAPE: 629.0996470687563 Predictor: ElasticNet Pearson Correlation: 0.9715028149512065 Spearman Correlation: 0.924474407734359 Coefficient of Determination: 0.9220046543119437 RMSE: 0.2870739604295912 NRMSE: 0.04890777389467796 MAPE: 358.73424388724425 Pearson Correlation: 0.6932865227512174 Spearman Correlation: 0.5914313146049203 Coefficient of Determination: 0.4805351110455015 RMSE: 0.6253999567565663 NRMSE: 0.1383781296064977 MAPE: 496.6967638490336 Predictor: RandomForests Pearson Correlation: 0.7174616656134231 Spearman Correlation: 0.5951580005452884 Coefficient of Determination: 0.49018827045054336 RMSE: 0.733946440930174 NRMSE: 0.12503985568771386 MAPE: 338.92319952441414 Pearson Correlation: 0.5175765898353328 Spearman Correlation: 0.41236285558745933 Coefficient of Determination: 0.2547136634191315 RMSE: 0.7491026393701872 NRMSE: 0.16574900749423327 MAPE: 312.1755383571592 Protein: ERBB3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 0.9999997880816034 Coefficient of Determination: 1.0 RMSE: 2.7774886969127873e-14 NRMSE: 7.495644808655277e-15 MAPE: 1.8269109577855676e-11 Pearson Correlation: 0.3581986293350989 Spearman Correlation: 0.35066023267123037 Coefficient of Determination: -0.007923430560062394 RMSE: 0.41861810494452134 NRMSE: 0.20254016031454847 MAPE: 231.2746329469601 Predictor: ElasticNet Pearson Correlation: 0.8898901661477258 Spearman Correlation: 0.8877639788276747 Coefficient of Determination: 0.702666142684446 RMSE: 0.25568889842279235 NRMSE: 0.06900309499814931 MAPE: 158.26610468965868 Pearson Correlation: 0.3411070808213769 Spearman Correlation: 0.33828601354131604 Coefficient of Determination: 0.020767170752827524 RMSE: 0.4126170970619665 NRMSE: 0.19963669033982626 MAPE: 256.01269954095034 Predictor: RandomForests Pearson Correlation: 0.5618596295184501 Spearman Correlation: 0.5244973935672127 Coefficient of Determination: 0.22014767933919155 RMSE: 0.4140910786980577 NRMSE: 0.1117512970549101 MAPE: 237.15494118019032 Pearson Correlation: 0.4062842397394761 Spearman Correlation: 0.4320378059576803 Coefficient of Determination: 0.09533462815966365 RMSE: 0.3965959001281615 NRMSE: 0.19188514840440551 MAPE: 237.63059812116785
Unnormalized
scenario = Scenario.AllmRNA_Mutations
normalizeTechnique = NormalizeTechnique.UN
X, Y, Z = get_data(normalizeTechnique)
X.head()
| UBE2Q2P2 | HMGB1P1 | LOC155060 | RNU12-2P | SSX9 | CXORF67 | EFCAB8 | SRP14P1 | LOC391343 | TRIM75P | ... | ZXDA | ZXDB | ZXDC | ZYG11A | ZYG11B | ZYX | ZZEF1 | ZZZ3 | TPTEP1 | AKR1C6P | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 10.7401 | 141.1933 | 314.4482 | 0.0000 | 0.0 | 0.000 | 2.9988 | 9.4249 | 0.0 | 0.0000 | ... | 74.1138 | 533.3625 | 1053.4444 | 94.6772 | 881.2262 | 5343.4779 | 934.3482 | 508.0867 | 52.2652 | 0.8568 |
| TCGA-A1-A0SH-01 | 3.0048 | 79.8003 | 95.7054 | 0.0000 | 0.0 | 0.000 | 0.3612 | 3.9727 | 0.0 | 0.0000 | ... | 87.7601 | 581.0946 | 801.3977 | 19.8634 | 1353.2389 | 5464.9614 | 1312.7898 | 1001.1151 | 455.7746 | 0.0000 |
| TCGA-A1-A0SJ-01 | 4.9419 | 134.8733 | 63.6488 | 0.3658 | 0.0 | 0.000 | 0.3658 | 4.7554 | 0.0 | 0.7316 | ... | 83.7677 | 2731.4129 | 834.3850 | 51.2117 | 1092.6383 | 3032.0988 | 958.3905 | 718.7929 | 43.5299 | 0.0000 |
| TCGA-A1-A0SK-01 | 28.8560 | 1119.1932 | 166.7192 | 0.3152 | 0.0 | 1.891 | 0.0000 | 3.4668 | 0.0 | 0.0000 | ... | 69.0199 | 610.1481 | 1775.6067 | 158.5251 | 1380.7123 | 591.2386 | 1798.9285 | 1335.6445 | 49.4800 | 0.0000 |
| TCGA-A1-A0SQ-01 | 1.0368 | 41.5532 | 75.8447 | 0.0000 | 0.0 | 0.000 | 0.4034 | 5.6480 | 0.0 | 0.0000 | ... | 106.1019 | 617.2466 | 875.0378 | 25.4160 | 969.4402 | 2903.0761 | 715.6833 | 691.4776 | 17.7509 | 0.0000 |
5 rows × 20440 columns
Y.head()
| RB1 | CDH1 | PTEN | BRCA2 | CDKN2A | TP53 | CTNNB1 | CCNE1 | CCND1 | CDH2 | CDH3 | ERBB2 | ERBB3 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-A1-A0SF-01 | 0.017184 | 0.705680 | 0.197730 | 0.108550 | 0.17550 | -0.472550 | 0.06978 | -0.75401 | -0.202360 | -0.222000 | -0.114060 | 0.25604 | 0.461410 |
| TCGA-A1-A0SH-01 | -0.081896 | 0.018364 | 0.699160 | -0.282430 | 0.68156 | -0.035545 | -0.11192 | -0.77956 | -0.014111 | 0.072251 | -0.031553 | 0.68354 | 0.033670 |
| TCGA-A1-A0SJ-01 | -0.106090 | 0.114310 | -0.110550 | 0.108220 | -0.00989 | -0.431850 | -0.85672 | -0.29589 | 0.290760 | -0.225320 | 0.128230 | 0.36458 | 0.430620 |
| TCGA-A1-A0SK-01 | -0.060244 | -0.963820 | -0.081596 | 0.309150 | 1.23630 | 0.898470 | -0.85965 | 0.92670 | 0.045974 | 0.389790 | -0.224090 | -1.04130 | -0.056604 |
| TCGA-A1-A0SQ-01 | 0.376500 | 0.425490 | 0.657440 | 0.003187 | -0.34580 | -0.020122 | 0.39368 | -1.02750 | 0.362490 | 0.292880 | -0.144850 | 0.31196 | 0.649260 |
perform_kFoldCV(num_folds, scenario, normalizeTechnique, X, Y, Z)
Fold: 1 Protein: RB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.017832262764705176 RMSE: 0.22609122586734381 NRMSE: 0.08562439911658541 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0064622508272080825 RMSE: 0.2813710133086082 NRMSE: 0.13900150344012696 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.22410193280330976 NRMSE: 0.08487102170168898 MAPE: 240.16506624676296 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.035002316369675546 RMSE: 0.2853325188278416 NRMSE: 0.1409585466216001 MAPE: 138.42570682542146 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 2.504589016906903e-15 NRMSE: 9.485283154352974e-16 MAPE: 1.2731008702255377e-11 Pearson Correlation: 0.048932178221607996 Spearman Correlation: 0.03928397229538582 Coefficient of Determination: -1.1634769612743234 RMSE: 0.41253114931715723 NRMSE: 0.2037965791027488 MAPE: 419.85322925718884 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.022217883695461623, tolerance: 0.0026969040165678213 positive)
Pearson Correlation: 0.9999993957540207 Spearman Correlation: 0.9999950404774531 Coefficient of Determination: 0.9999983483584797 RMSE: 0.0002880073015961486 NRMSE: 0.00010907301707863987 MAPE: 1.2370137186545316 Pearson Correlation: 0.036587048495312594 Spearman Correlation: 0.02451955906740806 Coefficient of Determination: -1.3715259693313682 RMSE: 0.43191128525618044 NRMSE: 0.21337065711711634 MAPE: 538.7683095733549 Predictor: RandomForests Pearson Correlation: 0.6893338695699293 Spearman Correlation: 0.4948387643721538 Coefficient of Determination: 0.23776323482880313 RMSE: 0.1956548186829351 NRMSE: 0.07409764009957777 MAPE: 208.05616773568042 Pearson Correlation: 0.15022165636204643 Spearman Correlation: 0.2444541995902839 Coefficient of Determination: -0.013434768060642366 RMSE: 0.2823439649176449 NRMSE: 0.13948215613722 MAPE: 138.79811486815606 Protein: CDH1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12177449909053428 RMSE: 1.1951653206606205 NRMSE: 0.20089175544360185 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11829904064371455 RMSE: 1.227018913081223 NRMSE: 0.19873326310796913 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1284315013833808 NRMSE: 0.1896746678404822 MAPE: 493.2826144309727 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.088763543839356e-05 RMSE: 1.1603174306688568 NRMSE: 0.18793000399547422 MAPE: 304.2612110852584 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 8.448691884407498e-15 NRMSE: 1.42011528825366e-15 MAPE: 1.1028076917041781e-11 Pearson Correlation: 0.4779047657781246 Spearman Correlation: 0.49812213442590975 Coefficient of Determination: -0.32746311299010933 RMSE: 1.3368525590174836 NRMSE: 0.21652239302540954 MAPE: 603.4497526671962 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.23291124458813053, tolerance: 0.06837930598298066 positive)
Pearson Correlation: 0.9999999356855813 Spearman Correlation: 0.9999986051342836 Coefficient of Determination: 0.9999998455572491 RMSE: 0.0004434646083089944 NRMSE: 7.454063642932688e-05 MAPE: 0.31846022916258043 Pearson Correlation: 0.31842736970408236 Spearman Correlation: 0.451473027021754 Coefficient of Determination: -1.6902406171118667 RMSE: 1.9031273187008546 NRMSE: 0.3082386898223016 MAPE: 576.5905573494842 Predictor: RandomForests Pearson Correlation: 0.7732362323157869 Spearman Correlation: 0.7353149529230595 Coefficient of Determination: 0.5885380357243323 RMSE: 0.7238357833501861 NRMSE: 0.12166738664215723 MAPE: 178.5357067695411 Pearson Correlation: 0.7706975133963258 Spearman Correlation: 0.7024192761681789 Coefficient of Determination: 0.5850650516422916 RMSE: 0.7474158241520349 NRMSE: 0.12105468306048313 MAPE: 148.81719150017614 Protein: CDH2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004084060130477685 RMSE: 0.37195168053170635 NRMSE: 0.13741024893390016 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006474841096328898 RMSE: 0.3763274359057868 NRMSE: 0.1942134674644098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37119446262208017 NRMSE: 0.13713050963735982 MAPE: 457.1455497959363 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00029679255421033446 RMSE: 0.3751706518978804 NRMSE: 0.19361647927846437 MAPE: 105.23649709758809 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999031343205 Coefficient of Determination: 1.0 RMSE: 4.90744810329094e-15 NRMSE: 1.8129603945852368e-15 MAPE: 6.85562705478138e-11 Pearson Correlation: 0.07352344353725564 Spearman Correlation: 0.1737830455565311 Coefficient of Determination: -1.5279157690054244 RMSE: 0.596411102260654 NRMSE: 0.30779331282482014 MAPE: 356.9481771284335 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.04526697902490613, tolerance: 0.007399072171665535 positive)
Pearson Correlation: 0.9999996719955141 Spearman Correlation: 0.9999966097010604 Coefficient of Determination: 0.999999144973429 RMSE: 0.0003432347847396049 NRMSE: 0.00012680135534384913 MAPE: 1.4847478302722192 Pearson Correlation: -0.04454826088911705 Spearman Correlation: -0.031684713686469614 Coefficient of Determination: -0.7207455188056764 RMSE: 0.4920653037905184 NRMSE: 0.25394297558472334 MAPE: 289.2291431257695 Predictor: RandomForests Pearson Correlation: 0.6688938306877342 Spearman Correlation: 0.5665986656635532 Coefficient of Determination: 0.24111552555866822 RMSE: 0.323362253588115 NRMSE: 0.11945983870230746 MAPE: 669.5224622450675 Pearson Correlation: 0.18916620554569433 Spearman Correlation: 0.22817773875719446 Coefficient of Determination: 0.03192915855078171 RMSE: 0.3690778562714745 NRMSE: 0.1904721351455202 MAPE: 105.1318904290896 Protein: CDH3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003025178489952651 RMSE: 0.20883135309817671 NRMSE: 0.14651130458142275 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -5.766266116724594e-05 RMSE: 0.2045852237570374 NRMSE: 0.1565890990172577 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20879977265736036 NRMSE: 0.1464891484659036 MAPE: 117.00444751841503 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00010319031051997385 RMSE: 0.20458988057767477 NRMSE: 0.15659266333795743 MAPE: 108.6708335710949 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 1.3265077297146778e-15 NRMSE: 9.306475063946498e-16 MAPE: 8.742054891404352e-12 Pearson Correlation: 0.23278948379448697 Spearman Correlation: 0.2334016193542094 Coefficient of Determination: -0.908200296858616 RMSE: 0.28260101805736293 NRMSE: 0.21630222352478198 MAPE: 731.8174503200879 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.01925615266754065, tolerance: 0.002341177429816801 positive)
Pearson Correlation: 0.99999918409991 Spearman Correlation: 0.9999938587161026 Coefficient of Determination: 0.9999979246405573 RMSE: 0.0003007992050407089 NRMSE: 0.00021103384761794137 MAPE: 0.5448072161734577 Pearson Correlation: 0.17448418829503215 Spearman Correlation: 0.206799336650083 Coefficient of Determination: -2.594689297255315 RMSE: 0.3878755655345788 NRMSE: 0.29687914025501433 MAPE: 657.8636487403516 Predictor: RandomForests Pearson Correlation: 0.6825311192041936 Spearman Correlation: 0.6628560096947819 Coefficient of Determination: 0.3582346871361095 RMSE: 0.1672700325629156 NRMSE: 0.11735283196028765 MAPE: 444.50531941187865 Pearson Correlation: 0.4788700038361175 Spearman Correlation: 0.5331674958540631 Coefficient of Determination: 0.2064818296797366 RMSE: 0.18223852028977391 NRMSE: 0.13948497928815998 MAPE: 335.7781566799737 Protein: PTEN x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.042477457330321045 RMSE: 0.639641264822803 NRMSE: 0.10001427016227082 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.028094267476815427 RMSE: 0.5035947533045023 NRMSE: 0.16597282753427667 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6264741234246338 NRMSE: 0.09795545671560218 MAPE: 358.458230587102 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008529117223389449 RMSE: 0.49877990548911916 NRMSE: 0.16438596845597492 MAPE: 165.12440096809618 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 6.482447489013103e-15 NRMSE: 1.0135951042159492e-15 MAPE: 1.1313311386557584e-11 Pearson Correlation: 0.01691831054223549 Spearman Correlation: -0.023285533118720125 Coefficient of Determination: -2.4330907644036714 RMSE: 0.9202532729551377 NRMSE: 0.3032935445768696 MAPE: 534.0895597956611 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.09227855450523467, tolerance: 0.021075629727119613 positive)
Pearson Correlation: 0.9999998564122444 Spearman Correlation: 0.9999979851939651 Coefficient of Determination: 0.9999996506247159 RMSE: 0.0003702961752682801 NRMSE: 5.789948796314284e-05 MAPE: 0.6901728912224647 Pearson Correlation: 0.05782508282862332 Spearman Correlation: 0.06183786947614868 Coefficient of Determination: -1.29140462538667 RMSE: 0.7518230225608284 NRMSE: 0.24778294857320823 MAPE: 351.37637839510995 Predictor: RandomForests Pearson Correlation: 0.6734606824706043 Spearman Correlation: 0.5872874532155734 Coefficient of Determination: 0.3522129565711293 RMSE: 0.5042190685357822 NRMSE: 0.07883966359718274 MAPE: 208.59862396646577 Pearson Correlation: 0.3076316807819703 Spearman Correlation: 0.33524046434494204 Coefficient of Determination: 0.09272943513878651 RMSE: 0.47307842088580804 NRMSE: 0.15591537172427922 MAPE: 152.12328290934676 Protein: BRCA2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026562361008646285 RMSE: 0.19787350383771835 NRMSE: 0.12800221484333532 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00017758204834872338 RMSE: 0.18475106890837595 NRMSE: 0.18489898809885505 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19761122685226298 NRMSE: 0.12783255071757013 MAPE: 122.3584697655559 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004686371500204567 RMSE: 0.18516702853540118 NRMSE: 0.18531528076000922 MAPE: 104.10370639794411 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999031343205 Coefficient of Determination: 1.0 RMSE: 2.038335686341996e-15 NRMSE: 1.3185771585667497e-15 MAPE: 5.30806570501579e-12 Pearson Correlation: 0.18776854825961434 Spearman Correlation: 0.19336185904055328 Coefficient of Determination: -1.831372055637055 RMSE: 0.31084713751862075 NRMSE: 0.3110960143300849 MAPE: 791.8093378382764 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.018646775426298053, tolerance: 0.002096995577721637 positive)
Pearson Correlation: 0.9999990567905422 Spearman Correlation: 0.9999935487454421 Coefficient of Determination: 0.9999975866030579 RMSE: 0.0003069912473895272 NRMSE: 0.00019858929488409508 MAPE: 0.8717072208721162 Pearson Correlation: 0.1328334110621238 Spearman Correlation: 0.1335188439163561 Coefficient of Determination: -2.474288027003408 RMSE: 0.34433511311951925 NRMSE: 0.34461080176092806 MAPE: 475.4101029961922 Predictor: RandomForests Pearson Correlation: 0.6646492801259603 Spearman Correlation: 0.5783323049749448 Coefficient of Determination: 0.260509183576794 RMSE: 0.16993311050172077 NRMSE: 0.10992787865765384 MAPE: 145.80630678785718 Pearson Correlation: 0.35309001641955157 Spearman Correlation: 0.35596082816438057 Coefficient of Determination: 0.09671151984628801 RMSE: 0.17557457973348123 NRMSE: 0.17571515185496522 MAPE: 131.48508577043017 Protein: CDKN2A x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.062199248812668806 RMSE: 0.6624014175436462 NRMSE: 0.14974599695798488 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10057809021042674 RMSE: 0.783524323220729 NRMSE: 0.21159176970584093 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6427147371513342 NRMSE: 0.145295521001771 MAPE: 207.86247046219444 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010510594090658465 RMSE: 0.7507796405829533 NRMSE: 0.20274902527219912 MAPE: 439.74244050751946 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 8.605542253533957e-15 NRMSE: 1.9454147741684086e-15 MAPE: 5.226448496319596e-12 Pearson Correlation: 0.3428970991104497 Spearman Correlation: 0.37517803141156963 Coefficient of Determination: -1.3413249719492581 RMSE: 1.1428070217755286 NRMSE: 0.30861653302066666 MAPE: 2175.774355577825 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.0917243451677382, tolerance: 0.02218251593097602 positive)
Pearson Correlation: 0.9999998703043353 Spearman Correlation: 0.9999979658207909 Coefficient of Determination: 0.999999689029565 RMSE: 0.0003584080939146563 NRMSE: 8.102364505813412e-05 MAPE: 0.2451415479648487 Pearson Correlation: 0.41657475856054516 Spearman Correlation: 0.3722075895034631 Coefficient of Determination: -0.16962672723025185 RMSE: 0.8077290330558912 NRMSE: 0.21812828329891742 MAPE: 1761.0902210593654 Predictor: RandomForests Pearson Correlation: 0.6757647614872638 Spearman Correlation: 0.6448690222035699 Coefficient of Determination: 0.44034004805471827 RMSE: 0.4808176191311576 NRMSE: 0.10869619512403245 MAPE: 154.5268658486716 Pearson Correlation: 0.7223631014573362 Spearman Correlation: 0.6426251097453908 Coefficient of Determination: 0.4679960627727733 RMSE: 0.5447528044975223 NRMSE: 0.14711120834391636 MAPE: 161.05658929517057 Protein: TP53 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05546789854165435 RMSE: 0.4652085657713222 NRMSE: 0.11180210665016156 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04275496084346875 RMSE: 0.4295356456720749 NRMSE: 0.1544592202783541 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4528195702181386 NRMSE: 0.10882469844223472 MAPE: 385.1312311142829 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0021867125961285705 RMSE: 0.4210972430949384 NRMSE: 0.15142480603219763 MAPE: 445.98268428885433 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 3.3027164574238588e-15 NRMSE: 7.937314245190722e-16 MAPE: 6.975997594508079e-12 Pearson Correlation: 0.215621259196925 Spearman Correlation: 0.35816017949468343 Coefficient of Determination: -2.8175105514576844 RMSE: 0.8218606759088168 NRMSE: 0.2955376589984598 MAPE: 978.8672464092624 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.05255373398347117, tolerance: 0.011010946742365387 positive)
Pearson Correlation: 0.9999998235463949 Spearman Correlation: 0.9999972683879195 Coefficient of Determination: 0.9999995718818101 RMSE: 0.0002962832012510214 NRMSE: 7.12048068375442e-05 MAPE: 1.1837719626173584 Pearson Correlation: 0.2734526394096649 Spearman Correlation: 0.42635840405814074 Coefficient of Determination: -1.5466435815596267 RMSE: 0.6712621528353633 NRMSE: 0.24138306046077287 MAPE: 937.7326610732928 Predictor: RandomForests Pearson Correlation: 0.7031149891467939 Spearman Correlation: 0.5822154500532357 Coefficient of Determination: 0.4151592677357707 RMSE: 0.34629322446932087 NRMSE: 0.08322355791139652 MAPE: 582.7012327400585 Pearson Correlation: 0.5026294084853328 Spearman Correlation: 0.48341137450004884 Coefficient of Determination: 0.25065181459500663 RMSE: 0.36412450556139175 NRMSE: 0.13093764808565275 MAPE: 279.60993872101614 Protein: CTNNB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.41897644861846284 RMSE: 0.8782004120680554 NRMSE: 0.17699587078381512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5843844136424388 RMSE: 0.9452480588674593 NRMSE: 0.23451795238114906 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7372351661004992 NRMSE: 0.14858519582008167 MAPE: 664.3346329845059 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.016639611663256337 RMSE: 0.7571798135162974 NRMSE: 0.1878578408962183 MAPE: 326.3792792664174 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 6.4424731158342616e-15 NRMSE: 1.2984406787662016e-15 MAPE: 1.5023081695243384e-11 Pearson Correlation: 0.30562291237132305 Spearman Correlation: 0.36400838942542196 Coefficient of Determination: -0.6751291651862537 RMSE: 0.9719404648818932 NRMSE: 0.2411403922199904 MAPE: 470.9409989846666 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.11668364554731063, tolerance: 0.02918679256026189 positive)
Pearson Correlation: 0.999999889330411 Spearman Correlation: 0.9999980433133323 Coefficient of Determination: 0.99999973449341 RMSE: 0.0003798776086379018 NRMSE: 7.656198654451131e-05 MAPE: 0.2469465412481481 Pearson Correlation: 0.14937800846184726 Spearman Correlation: 0.3679104477611941 Coefficient of Determination: -6.734269477892502 RMSE: 2.0884551990825777 NRMSE: 0.518149952633002 MAPE: 436.8249912595461 Predictor: RandomForests Pearson Correlation: 0.6960797502211378 Spearman Correlation: 0.7270380833800759 Coefficient of Determination: 0.46791759693714274 RMSE: 0.537768662632475 NRMSE: 0.10838395361115648 MAPE: 391.9133094517845 Pearson Correlation: 0.5481341129446063 Spearman Correlation: 0.49940493610379477 Coefficient of Determination: 0.29197140177614966 RMSE: 0.6318891719765496 NRMSE: 0.1567729796994367 MAPE: 227.51186987703798 Protein: CCNE1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.7135069779129597 RMSE: 0.7967382438332794 NRMSE: 0.19227700939577658 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.179220592822603 RMSE: 0.7927883268238614 NRMSE: 0.2823823069719898 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.48367116033059243 NRMSE: 0.11672446372338549 MAPE: 119.9663870203584 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008650225247206267 RMSE: 0.5393577763958428 NRMSE: 0.19211318838676503 MAPE: 85.21064296831354 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 3.749756502179813e-15 NRMSE: 9.04929532104113e-16 MAPE: 7.158099377368159e-13 Pearson Correlation: 0.5479992209040908 Spearman Correlation: 0.6175299970734563 Coefficient of Determination: -0.15367458411512813 RMSE: 0.5768306283376617 NRMSE: 0.20546059780504425 MAPE: 89.86869982743441 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.04658468910017559, tolerance: 0.012562459394718587 positive)
Pearson Correlation: 0.9999998385376643 Spearman Correlation: 0.9999955441787899 Coefficient of Determination: 0.9999996543180452 RMSE: 0.00028437312290453603 NRMSE: 6.86278260744108e-05 MAPE: 0.05177798987450995 Pearson Correlation: 0.5253634393597355 Spearman Correlation: 0.437347575846259 Coefficient of Determination: -0.07330243863834562 RMSE: 0.5563751288348102 NRMSE: 0.19817457839174005 MAPE: 114.92761695263476 Predictor: RandomForests Pearson Correlation: 0.863156106128827 Spearman Correlation: 0.7215867798710542 Coefficient of Determination: 0.7361501249102242 RMSE: 0.2484440722228258 NRMSE: 0.059957060651790864 MAPE: 55.18184474999861 Pearson Correlation: 0.8452797234154074 Spearman Correlation: 0.7059557472263749 Coefficient of Determination: 0.7072893188507468 RMSE: 0.2905533820221425 NRMSE: 0.10349185468286463 MAPE: 44.40531059758389 Protein: CCND1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.46307157054532877 RMSE: 0.2889602070536637 NRMSE: 0.17371452011738692 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5143850316766378 RMSE: 0.2891269997261264 NRMSE: 0.20591917819933792 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23889400650986123 NRMSE: 0.1436161682015734 MAPE: 407.7075388184287 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006391660369380325 RMSE: 0.23502239312505885 NRMSE: 0.16738532927259048 MAPE: 1319.2440058755967 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 3.2518013158977583e-15 NRMSE: 1.9548889131414547e-15 MAPE: 5.967890332761833e-12 Pearson Correlation: 0.2262973943482622 Spearman Correlation: 0.2009023509901473 Coefficient of Determination: -1.0618990176263652 RMSE: 0.33736823668337673 NRMSE: 0.24027707586702804 MAPE: 2094.453143665974 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.022941416063507237, tolerance: 0.0030646775987981157 positive)
Pearson Correlation: 0.9999993886824815 Spearman Correlation: 0.9999947111340567 Coefficient of Determination: 0.9999984216643218 RMSE: 0.0003001269128251457 NRMSE: 0.00018042762070021146 MAPE: 0.42995932536056736 Pearson Correlation: 0.2757735037205281 Spearman Correlation: 0.24163008486976886 Coefficient of Determination: -0.6463975422368338 RMSE: 0.3014656608178458 NRMSE: 0.21470689762538162 MAPE: 1282.9954777982457 Predictor: RandomForests Pearson Correlation: 0.6336965574428526 Spearman Correlation: 0.6203517770037437 Coefficient of Determination: 0.28380364931207624 RMSE: 0.20217213899481803 NRMSE: 0.12154004340143683 MAPE: 337.99367037258367 Pearson Correlation: 0.493064782711198 Spearman Correlation: 0.4864696127207102 Coefficient of Determination: 0.19157907666086338 RMSE: 0.21124637638436908 NRMSE: 0.15045180928748297 MAPE: 1028.1454071943883 Protein: ERBB2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10512598969709641 RMSE: 1.0713675802437574 NRMSE: 0.18252510013182233 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.044647408489899565 RMSE: 0.9270678870989714 NRMSE: 0.17190207437399804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.019137082422293 NRMSE: 0.17362677520525632 MAPE: 623.5376350146478 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023409668319905652 RMSE: 0.9175958270545099 NRMSE: 0.17014571241507695 MAPE: 534.1782921207478 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 5.222975561812234e-15 NRMSE: 8.898198480011302e-16 MAPE: 3.1816128279823894e-12 Pearson Correlation: 0.5499109483683936 Spearman Correlation: 0.5071992976294997 Coefficient of Determination: -0.4653233977909912 RMSE: 1.0979774335745696 NRMSE: 0.20359307130995172 MAPE: 943.8171541046166 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.1473368771693594, tolerance: 0.05577498909165362 positive)
Pearson Correlation: 0.9999999419055523 Spearman Correlation: 0.9999980239401592 Coefficient of Determination: 0.9999998779614023 RMSE: 0.00035602558473421026 NRMSE: 6.06548179181577e-05 MAPE: 0.38646885888410215 Pearson Correlation: 0.46924851807585194 Spearman Correlation: 0.5612574382987027 Coefficient of Determination: -0.9870632263218286 RMSE: 1.2785935674132498 NRMSE: 0.2370839175622566 MAPE: 1042.3307797481664 Predictor: RandomForests Pearson Correlation: 0.8692382542727217 Spearman Correlation: 0.7395481169483745 Coefficient of Determination: 0.7468338495105447 RMSE: 0.5127851304201274 NRMSE: 0.08736138651381287 MAPE: 421.71101321501965 Pearson Correlation: 0.82165567631816 Spearman Correlation: 0.6579016681299386 Coefficient of Determination: 0.668648099559003 RMSE: 0.5221212931902485 NRMSE: 0.09681462881332255 MAPE: 273.6577987203921 Protein: ERBB3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20107865915633893 RMSE: 0.5031866190144979 NRMSE: 0.13579562619977975 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27170508071542576 RMSE: 0.5249654097328843 NRMSE: 0.21064675210776365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4591381271561762 NRMSE: 0.12390820251039036 MAPE: 217.3172646626022 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006238151163089789 RMSE: 0.4669688111029227 NRMSE: 0.18737513285781116 MAPE: 255.37469449838227 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 5.841599986093084e-15 NRMSE: 1.5764801728507e-15 MAPE: 3.933057634334922e-12 Pearson Correlation: 0.1507607045066145 Spearman Correlation: 0.1353772014648376 Coefficient of Determination: -1.0966137799189215 RMSE: 0.6740571242041681 NRMSE: 0.27047104688469764 MAPE: 386.78207098513 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.05801488293563896, tolerance: 0.011320379923715432 positive)
Pearson Correlation: 0.9999997603110332 Spearman Correlation: 0.9999959316415038 Coefficient of Determination: 0.9999994113261059 RMSE: 0.0003522741264706633 NRMSE: 9.50686758955445e-05 MAPE: 0.21748181309395898 Pearson Correlation: 0.22311439057298385 Spearman Correlation: 0.23846483082745126 Coefficient of Determination: -0.7983967133605008 RMSE: 0.62428116958202 NRMSE: 0.2504980296538023 MAPE: 464.7075692792388 Predictor: RandomForests Pearson Correlation: 0.6282795399923213 Spearman Correlation: 0.6132595940126941 Coefficient of Determination: 0.33623150369662325 RMSE: 0.37406896364610187 NRMSE: 0.10095047690201293 MAPE: 221.66673881254457 Pearson Correlation: 0.41404691070652694 Spearman Correlation: 0.4166501032220726 Coefficient of Determination: 0.16077722328114563 RMSE: 0.4264578532205707 NRMSE: 0.17111977289603023 MAPE: 256.0023996159598 Fold: 2 Protein: RB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.012372001566697044 RMSE: 0.23649063304821735 NRMSE: 0.08648721220312221 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0009378943328373079 RMSE: 0.2450188572791325 NRMSE: 0.14037816530069125 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23504113789248732 NRMSE: 0.08595711596419227 MAPE: 193.09195966690785 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0188719096951242 RMSE: 0.24720413946765535 NRMSE: 0.14163017466721783 MAPE: 243.98846833881254 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 2.457015499904926e-15 NRMSE: 8.985574531542298e-16 MAPE: 9.343743805085306e-12 Pearson Correlation: -0.0457913668940389 Spearman Correlation: 0.03295776021851527 Coefficient of Determination: -2.190049820295821 RMSE: 0.4374160124552314 NRMSE: 0.2506078837501755 MAPE: 1924.0347183147044 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.026786254713393437, tolerance: 0.0029666208701464043 positive)
Pearson Correlation: 0.9999993286160529 Spearman Correlation: 0.9999947305072939 Coefficient of Determination: 0.9999980840500003 RMSE: 0.0003253388794766573 NRMSE: 0.0001189799881058577 MAPE: 1.169130672697697 Pearson Correlation: 0.0826439940844903 Spearman Correlation: 0.1180909179592235 Coefficient of Determination: -1.1396968124674216 RMSE: 0.3582383403194961 NRMSE: 0.2052447779442748 MAPE: 1203.2927563176124 Predictor: RandomForests Pearson Correlation: 0.6987916439180556 Spearman Correlation: 0.5322399909411258 Coefficient of Determination: 0.2600681831253894 RMSE: 0.2021807168841918 NRMSE: 0.07393970044038613 MAPE: 185.13642364168197 Pearson Correlation: -0.05934870427127739 Spearman Correlation: 0.059379572724612244 Coefficient of Determination: -0.07998376792758566 RMSE: 0.2545098285596907 NRMSE: 0.14581580855020035 MAPE: 240.02166911164102 Protein: CDH1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0848918633043636 RMSE: 1.167193365558287 NRMSE: 0.18724526599154356 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3357437347566168 RMSE: 1.329821844339591 NRMSE: 0.2361608674018098 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1205973324834733 NRMSE: 0.17977016643674873 MAPE: 435.6132552091354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08742327423650509 RMSE: 1.1998617303694428 NRMSE: 0.2130814651694979 MAPE: 199.56682063145456 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 7.031830434447433e-15 NRMSE: 1.1280709768905803e-15 MAPE: 6.424315832627567e-12 Pearson Correlation: 0.498470494696496 Spearman Correlation: 0.5353965466783729 Coefficient of Determination: -0.662575390229198 RMSE: 1.4836196048796473 NRMSE: 0.26347355796122307 MAPE: 920.8692924118232 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.22971582094712517, tolerance: 0.0674331510902594 positive)
Pearson Correlation: 0.9999999446533359 Spearman Correlation: 0.9999983726566642 Coefficient of Determination: 0.9999998665292349 RMSE: 0.00040939511782036236 NRMSE: 6.567660508869212e-05 MAPE: 0.24187811217398725 Pearson Correlation: 0.4756248389603751 Spearman Correlation: 0.5035703833772315 Coefficient of Determination: -0.10065625545349666 RMSE: 1.2071402829203242 NRMSE: 0.2143740513088837 MAPE: 589.7032756250397 Predictor: RandomForests Pearson Correlation: 0.796330516428993 Spearman Correlation: 0.71387418433711 Coefficient of Determination: 0.6263307512345694 RMSE: 0.6850042464735779 NRMSE: 0.10989079112434072 MAPE: 154.29377293222015 Pearson Correlation: 0.6724080439527454 Spearman Correlation: 0.6932991576472953 Coefficient of Determination: 0.4181315747699218 RMSE: 0.877696335755613 NRMSE: 0.15586864424713426 MAPE: 216.6025755609669 Protein: CDH2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0042702958885580955 RMSE: 0.36888339320753855 NRMSE: 0.13366308906715652 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005559500410650786 RMSE: 0.3881548727768219 NRMSE: 0.20448899349205915 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.368098286175459 NRMSE: 0.13337860938309262 MAPE: 454.10955555003125 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001542350901309053 RMSE: 0.3871102269004122 NRMSE: 0.20393864980502915 MAPE: 137.797948259631 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 3.3234267895092045e-15 NRMSE: 1.2042274039818844e-15 MAPE: 3.2718329418663963e-11 Pearson Correlation: 0.12566416441786374 Spearman Correlation: 0.2191883718661594 Coefficient of Determination: -1.5346737854914867 RMSE: 0.6162574639548352 NRMSE: 0.3246587312805677 MAPE: 1147.8083996887192 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.047459571648436595, tolerance: 0.007276153902921154 positive)
Pearson Correlation: 0.9999997077559828 Spearman Correlation: 0.9999967840594747 Coefficient of Determination: 0.9999991782704017 RMSE: 0.00033367852768457736 NRMSE: 0.00012090677863779165 MAPE: 1.1744433840145765 Pearson Correlation: 0.3163745419922387 Spearman Correlation: 0.3001804701980295 Coefficient of Determination: -0.1367096364599818 RMSE: 0.4126918825907159 NRMSE: 0.21741565960410072 MAPE: 644.1732307919917 Predictor: RandomForests Pearson Correlation: 0.6908564139647391 Spearman Correlation: 0.5991979909283358 Coefficient of Determination: 0.2385536161098164 RMSE: 0.32120585989700473 NRMSE: 0.11638736861258235 MAPE: 385.0580845571761 Pearson Correlation: 0.2609607299361275 Spearman Correlation: 0.3034143010438006 Coefficient of Determination: 0.0459585350617947 RMSE: 0.37808093740467613 NRMSE: 0.19918181058844894 MAPE: 131.52009254641996 Protein: CDH3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032535082492379797 RMSE: 0.20804431995898212 NRMSE: 0.15657381105189322 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10171995354262497 RMSE: 0.2077503373255318 NRMSE: 0.17094572313464315 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2077067066012722 NRMSE: 0.15631972379736453 MAPE: 129.48889047536676 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1434844410400551 RMSE: 0.21165145574543795 NRMSE: 0.1741557275943701 MAPE: 252.24053055421223 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999612537293 Coefficient of Determination: 1.0 RMSE: 1.624206817856583e-15 NRMSE: 1.2223753643378134e-15 MAPE: 5.09396538502529e-12 Pearson Correlation: 0.14794758396917654 Spearman Correlation: 0.2710808701590089 Coefficient of Determination: -1.4659295315044614 RMSE: 0.31081105743622345 NRMSE: 0.25574842214780175 MAPE: 1275.1309130156567 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.019534582344724827, tolerance: 0.002316729479435792 positive)
Pearson Correlation: 0.9999991672265093 Spearman Correlation: 0.9999957766564183 Coefficient of Determination: 0.9999978928922443 RMSE: 0.0003015045652559313 NRMSE: 0.000226911837059396 MAPE: 0.5144313545276341 Pearson Correlation: 0.1441094260006969 Spearman Correlation: 0.23358696712515856 Coefficient of Determination: -1.2439542427156174 RMSE: 0.29649210160067135 NRMSE: 0.24396618250692947 MAPE: 3879.2292579211667 Predictor: RandomForests Pearson Correlation: 0.6904225074888863 Spearman Correlation: 0.6753902863485073 Coefficient of Determination: 0.38912127534821395 RMSE: 0.16234092628059385 NRMSE: 0.12217751257260227 MAPE: 268.8520228414901 Pearson Correlation: 0.3241369704191651 Spearman Correlation: 0.4028387474392742 Coefficient of Determination: -0.023452337408445212 RMSE: 0.20023497650625108 NRMSE: 0.16476176788138822 MAPE: 1367.1896654321022 Protein: PTEN x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.03862384422015608 RMSE: 0.6356813050691055 NRMSE: 0.09939509109047072 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04557869434051831 RMSE: 0.5231599683741948 NRMSE: 0.17546282813730707 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6237496213368888 NRMSE: 0.09752945373104352 MAPE: 266.6118096347601 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0006815032361495721 RMSE: 0.511804474527534 NRMSE: 0.1716543045772518 MAPE: 469.99462827282787 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 4.1789913934384595e-15 NRMSE: 6.534268459758361e-16 MAPE: 4.4551725702662806e-12 Pearson Correlation: 0.059992891659452686 Spearman Correlation: 0.05725782850453615 Coefficient of Determination: -2.415276205432469 RMSE: 0.945516383450756 NRMSE: 0.31711711277527366 MAPE: 2221.7839932838165 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.09422054348061605, tolerance: 0.020892714789331884 positive)
Pearson Correlation: 0.9999998822611218 Spearman Correlation: 0.9999981401790449 Coefficient of Determination: 0.9999996989850736 RMSE: 0.00034221915195340645 NRMSE: 5.350936626587545e-05 MAPE: 0.41265281463886466 Pearson Correlation: 0.05569161091393818 Spearman Correlation: 0.0804214223002634 Coefficient of Determination: -1.4098300611928845 RMSE: 0.7942356029193237 NRMSE: 0.26637899212480676 MAPE: 976.8395874688543 Predictor: RandomForests Pearson Correlation: 0.6526063544290698 Spearman Correlation: 0.5628234835736983 Coefficient of Determination: 0.34878534557928365 RMSE: 0.5033526709835953 NRMSE: 0.07870419372740134 MAPE: 221.89652319246892 Pearson Correlation: 0.3192834814070131 Spearman Correlation: 0.3222027119305434 Coefficient of Determination: 0.10023271215540464 RMSE: 0.4853122371717978 NRMSE: 0.16276906264146693 MAPE: 468.14027559933777 Protein: BRCA2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004232193403179485 RMSE: 0.1957372843548259 NRMSE: 0.12609907189874434 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0041831029428383015 RMSE: 0.19359139518213575 NRMSE: 0.1310414025181481 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19532439544108754 NRMSE: 0.12583307807446453 MAPE: 126.37207660533247 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01701765352310658 RMSE: 0.19482462133446873 NRMSE: 0.1318761693964576 MAPE: 116.2694601668026 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 0.9999999225074571 Coefficient of Determination: 1.0 RMSE: 2.339929695269895e-15 NRMSE: 1.5074438365404383e-15 MAPE: 4.7626348994874104e-12 Pearson Correlation: 0.044938935138476035 Spearman Correlation: 0.15772607550482878 Coefficient of Determination: -2.5440716215914465 RMSE: 0.36368956462885493 NRMSE: 0.24618031491193906 MAPE: 600.8741590081489 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.018220087265445092, tolerance: 0.0020487419647026942 positive)
Pearson Correlation: 0.9999991177503378 Spearman Correlation: 0.9999940718202495 Coefficient of Determination: 0.99999769238246 RMSE: 0.0002967142501383163 NRMSE: 0.0001911510711150371 MAPE: 0.996430630305719 Pearson Correlation: 0.0893234672325412 Spearman Correlation: 0.20623353819139595 Coefficient of Determination: -2.0607982550066044 RMSE: 0.33798462734905 NRMSE: 0.22878072424512463 MAPE: 577.1652736140327 Predictor: RandomForests Pearson Correlation: 0.6633017999011463 Spearman Correlation: 0.5895854125552045 Coefficient of Determination: 0.2600855072133481 RMSE: 0.1680146903029947 NRMSE: 0.10823945260299225 MAPE: 179.15238796072825 Pearson Correlation: 0.38899522199017017 Spearman Correlation: 0.40819920007804117 Coefficient of Determination: 0.09760763474163947 RMSE: 0.1835174226036752 NRMSE: 0.12422236237243893 MAPE: 144.10432269552808 Protein: CDKN2A x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07796029040511754 RMSE: 0.688717064305458 NRMSE: 0.155695052403178 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04182297654643197 RMSE: 0.6873705418142212 NRMSE: 0.18569552134596423 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6633450034781481 NRMSE: 0.14995930902637006 MAPE: 291.0442764508337 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00497373418246827 RMSE: 0.6751049711753466 NRMSE: 0.1823819351565125 MAPE: 246.23249271843073 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999999999998 Coefficient of Determination: 1.0 RMSE: 4.64135976649751e-15 NRMSE: 1.0492505406346805e-15 MAPE: 4.7537719634702624e-12 Pearson Correlation: 0.3911241267592017 Spearman Correlation: 0.33846454004487375 Coefficient of Determination: -0.5748183530661777 RMSE: 0.8451021061521213 NRMSE: 0.22830724717746956 MAPE: 1234.0378698038664 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.0990221588370588, tolerance: 0.023629428078437084 positive)
Pearson Correlation: 0.9999998725121712 Spearman Correlation: 0.9999979851939651 Coefficient of Determination: 0.9999996995232808 RMSE: 0.00036361758370783494 NRMSE: 8.220133010237026e-05 MAPE: 0.5472623490950181 Pearson Correlation: 0.42653791258399865 Spearman Correlation: 0.40596527168081165 Coefficient of Determination: -0.2977130000375139 RMSE: 0.767155279130731 NRMSE: 0.20724964316261374 MAPE: 615.483703749232 Predictor: RandomForests Pearson Correlation: 0.6834234499874097 Spearman Correlation: 0.6454562869232578 Coefficient of Determination: 0.4460122820102085 RMSE: 0.4937300157627911 NRMSE: 0.11161524036685679 MAPE: 183.79123176509086 Pearson Correlation: 0.6949765984081145 Spearman Correlation: 0.5705784801482783 Coefficient of Determination: 0.4447885327299339 RMSE: 0.5017913424384337 NRMSE: 0.13556066091377614 MAPE: 140.77123805087118 Protein: TP53 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056514421630322165 RMSE: 0.4680116353271619 NRMSE: 0.125354663272308 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.038787823290495904 RMSE: 0.4172475009588805 NRMSE: 0.13741067049526773 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45532231520770117 NRMSE: 0.12195588997126053 MAPE: 270.4736663787217 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004550568384941389 RMSE: 0.41031389187281503 NRMSE: 0.13512724909363247 MAPE: 926.3760148542492 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 3.459841129156503e-15 NRMSE: 9.267017889799125e-16 MAPE: 5.6623799642192246e-12 Pearson Correlation: 0.20352946014717693 Spearman Correlation: 0.2114915617988489 Coefficient of Determination: -1.137949346770117 RMSE: 0.5985894040334162 NRMSE: 0.19713136968003167 MAPE: 3160.20886261201 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.056139046775181806, tolerance: 0.011132998655991638 positive)
Pearson Correlation: 0.999999801565975 Spearman Correlation: 0.9999973458804606 Coefficient of Determination: 0.9999995017512152 RMSE: 0.0003213971782932485 NRMSE: 8.608468683360079e-05 MAPE: 0.4518860012233544 Pearson Correlation: 0.18984484967305756 Spearman Correlation: 0.25476538874256177 Coefficient of Determination: -1.5832966157914727 RMSE: 0.6579872172523414 NRMSE: 0.2166926452337696 MAPE: 722.2645985400666 Predictor: RandomForests Pearson Correlation: 0.7169473077991655 Spearman Correlation: 0.6062794227099604 Coefficient of Determination: 0.4095050544066099 RMSE: 0.3498863725014411 NRMSE: 0.09371538034054938 MAPE: 301.3245675666708 Pearson Correlation: 0.6173564205638801 Spearman Correlation: 0.48974062255014283 Coefficient of Determination: 0.31112904456533574 RMSE: 0.3397811299092888 NRMSE: 0.11189893953870865 MAPE: 1538.3651968677343 Protein: CTNNB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.3748966387166963 RMSE: 0.8500866572002603 NRMSE: 0.167208233123576 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8495839638322671 RMSE: 1.0424819908687044 NRMSE: 0.25944650229429445 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7249835868058448 NRMSE: 0.14260102022144863 MAPE: 628.0323178598313 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1173955414845127 RMSE: 0.8102797819674623 NRMSE: 0.20165744555074847 MAPE: 279.2127938139016 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 5.078287062578737e-15 NRMSE: 9.988762908298068e-16 MAPE: 6.904617201284204e-12 Pearson Correlation: 0.3451125394757848 Spearman Correlation: 0.41831528631353043 Coefficient of Determination: -0.8793681057037936 RMSE: 1.0508420951046928 NRMSE: 0.2615271135871912 MAPE: 336.4335124685347 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.11740848185316852, tolerance: 0.028224784501103505 positive)
Pearson Correlation: 0.9999998858727475 Spearman Correlation: 0.9999984695222517 Coefficient of Determination: 0.9999997216877613 RMSE: 0.00038246731491011903 NRMSE: 7.522960560781256e-05 MAPE: 0.23654890461345543 Pearson Correlation: 0.17312322774701475 Spearman Correlation: 0.36450590186323284 Coefficient of Determination: -1.720007534192686 RMSE: 1.2642023374585407 NRMSE: 0.3146268976527565 MAPE: 271.2798174244065 Predictor: RandomForests Pearson Correlation: 0.6884765273868737 Spearman Correlation: 0.6452320610136008 Coefficient of Determination: 0.4611354222873677 RMSE: 0.5321915719892693 NRMSE: 0.10467969551323157 MAPE: 390.47701271756114 Pearson Correlation: 0.5638433959936578 Spearman Correlation: 0.5462198809872207 Coefficient of Determination: 0.2704515467932552 RMSE: 0.6547245200871703 NRMSE: 0.16294380928477897 MAPE: 192.72276914574073 Protein: CCNE1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4791855590206433 RMSE: 0.8074207285197392 NRMSE: 0.19485501569122746 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.202859557398884 RMSE: 0.7485643095226329 NRMSE: 0.4068306401244751 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5127968844139411 NRMSE: 0.12375338089483821 MAPE: 119.54577818111471 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -4.708057571667368e-05 RMSE: 0.41828317133084 NRMSE: 0.22732904598983691 MAPE: 82.35330275987332 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.5599713177400786e-15 NRMSE: 6.177984211550254e-16 MAPE: 4.4806614035035435e-13 Pearson Correlation: 0.5412329400120582 Spearman Correlation: 0.4515754560530681 Coefficient of Determination: -0.4364968444099828 RMSE: 0.5013170865464429 NRMSE: 0.2724564190818662 MAPE: 67.13448491477101 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.052335900192640034, tolerance: 0.014120986618491432 positive)
Pearson Correlation: 0.9999998331379198 Spearman Correlation: 0.9999961059998002 Coefficient of Determination: 0.9999996451220151 RMSE: 0.00030548149483797146 NRMSE: 7.372191395081002e-05 MAPE: 0.05668534615241689 Pearson Correlation: 0.5565430793446664 Spearman Correlation: 0.41567651936396455 Coefficient of Determination: 0.022230387249908223 RMSE: 0.41359800660547485 NRMSE: 0.22478274697442643 MAPE: 63.43661444238642 Predictor: RandomForests Pearson Correlation: 0.8642594125749539 Spearman Correlation: 0.7121047117850964 Coefficient of Determination: 0.7412589850238748 RMSE: 0.26084229737392367 NRMSE: 0.06294912695753159 MAPE: 68.34321875840949 Pearson Correlation: 0.8372200191372058 Spearman Correlation: 0.7378184954667834 Coefficient of Determination: 0.6967541059838958 RMSE: 0.23033377928569565 NRMSE: 0.12518208212310702 MAPE: 43.2559401147665 Protein: CCND1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.45856423758787734 RMSE: 0.28833360256132 NRMSE: 0.17333782361719832 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5341468996847767 RMSE: 0.29160473760802996 NRMSE: 0.22560247695118987 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.238744006534441 NRMSE: 0.14352599255416013 MAPE: 629.7720061387732 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0019489182463834354 RMSE: 0.23565892515949136 NRMSE: 0.18231952494235576 MAPE: 420.8194012889175 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999806268648 Coefficient of Determination: 1.0 RMSE: 2.258966071987277e-15 NRMSE: 1.3580250760404931e-15 MAPE: 5.2640905642971795e-12 Pearson Correlation: 0.2231636304885955 Spearman Correlation: 0.2254316652033948 Coefficient of Determination: -1.1540151050487721 RMSE: 0.3455297726501777 NRMSE: 0.26732203739105165 MAPE: 730.200767877291 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.021661821300781682, tolerance: 0.003060830225233494 positive)
Pearson Correlation: 0.9999993978845786 Spearman Correlation: 0.9999962609848826 Coefficient of Determination: 0.9999984990971708 RMSE: 0.00029248848024597177 NRMSE: 0.00017583561592740966 MAPE: 0.7010407800309055 Pearson Correlation: 0.2784918639771291 Spearman Correlation: 0.2487708516242318 Coefficient of Determination: -0.63576574449618 RMSE: 0.3011075580078855 NRMSE: 0.23295441450136592 MAPE: 502.376631620334 Predictor: RandomForests Pearson Correlation: 0.626890179461012 Spearman Correlation: 0.6314754050975873 Coefficient of Determination: 0.33556605050434707 RMSE: 0.19460696748334683 NRMSE: 0.11699208106392062 MAPE: 465.4601492818465 Pearson Correlation: 0.20925385127300225 Spearman Correlation: 0.3234806360355088 Coefficient of Determination: 0.014889821895411215 RMSE: 0.2336702941555634 NRMSE: 0.18078100371012829 MAPE: 311.7655775507165 Protein: ERBB2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10787728881134795 RMSE: 1.034673205097243 NRMSE: 0.18568153277771168 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04400358650048397 RMSE: 1.0802115255265201 NRMSE: 0.18403181176661842 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9830087249663667 NRMSE: 0.17640987114232304 MAPE: 404.9643732056693 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.009144436152300761 RMSE: 1.062024355318919 NRMSE: 0.1809333279927286 MAPE: 1340.9898682069656 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999418805934 Coefficient of Determination: 1.0 RMSE: 4.6381497463509526e-15 NRMSE: 8.323582266480542e-16 MAPE: 4.392370613638508e-12 Pearson Correlation: 0.7694697979644322 Spearman Correlation: 0.49503463076773 Coefficient of Determination: 0.5443702551423701 RMSE: 0.713614795282245 NRMSE: 0.12157602522824762 MAPE: 1203.1641242332319 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.1400367685280681, tolerance: 0.0518906404354321 positive)
Pearson Correlation: 0.9999999337950537 Spearman Correlation: 0.9999975396117202 Coefficient of Determination: 0.9999998614355468 RMSE: 0.0003659175916034301 NRMSE: 6.566724541094881e-05 MAPE: 0.3137620619546129 Pearson Correlation: 0.6264874364533619 Spearman Correlation: 0.4770363866939811 Coefficient of Determination: 0.14843911666803677 RMSE: 0.9755862334891315 NRMSE: 0.1662071713186588 MAPE: 2816.310259499257 Predictor: RandomForests Pearson Correlation: 0.8631775258087501 Spearman Correlation: 0.7280247289722156 Coefficient of Determination: 0.7402258626345581 RMSE: 0.5010203063948734 NRMSE: 0.08991265839866364 MAPE: 229.2523982873941 Pearson Correlation: 0.7849110615706305 Spearman Correlation: 0.5317589335597037 Coefficient of Determination: 0.5964691106957325 RMSE: 0.6715776024560737 NRMSE: 0.11441429757160906 MAPE: 1448.6206618710692 Protein: ERBB3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.22544319167926496 RMSE: 0.49276112816642853 NRMSE: 0.13298208544838536 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.18202543932109472 RMSE: 0.5629306521688778 NRMSE: 0.2077549194412726 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4451330586744577 NRMSE: 0.12012863649535893 MAPE: 216.4334586442862 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0003404063320495698 RMSE: 0.5178636059974695 NRMSE: 0.19112249676056875 MAPE: 281.0616225457346 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999997868954927 Coefficient of Determination: 1.0 RMSE: 3.595574741425217e-15 NRMSE: 9.703424238828588e-16 MAPE: 2.3738911831748955e-12 Pearson Correlation: 0.028507986788964306 Spearman Correlation: 0.04328845966247196 Coefficient of Determination: -1.0877018994210181 RMSE: 0.7481276886631697 NRMSE: 0.2761036498743979 MAPE: 494.19173360922156 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.057379649815621735, tolerance: 0.01064030272396596 positive)
Pearson Correlation: 0.9999997476952183 Spearman Correlation: 0.9999959897602337 Coefficient of Determination: 0.9999993698212819 RMSE: 0.00035336352240378477 NRMSE: 9.53626725904635e-05 MAPE: 0.21034717443001857 Pearson Correlation: 0.09862106003933331 Spearman Correlation: 0.21642278802068093 Coefficient of Determination: -1.3775498401338413 RMSE: 0.79837384383607 NRMSE: 0.2946474720662794 MAPE: 430.31461584314474 Predictor: RandomForests Pearson Correlation: 0.6393714635490555 Spearman Correlation: 0.6361349998598498 Coefficient of Determination: 0.3487599548934015 RMSE: 0.35921990862736747 NRMSE: 0.09694314314442364 MAPE: 189.08056997952667 Pearson Correlation: 0.42114052062191293 Spearman Correlation: 0.45584820993073843 Coefficient of Determination: 0.1646981466269246 RMSE: 0.47322012713306055 NRMSE: 0.17464639562925038 MAPE: 352.09447399711024 Fold: 3 Protein: RB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01272330861584492 RMSE: 0.2421068018038906 NRMSE: 0.08854110656959135 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0028050639565306845 RMSE: 0.22197574606877257 NRMSE: 0.15575715092466183 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2405811452360815 NRMSE: 0.08798315726890049 MAPE: 214.58330521157012 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.030760330037658434 RMSE: 0.2250484950685124 NRMSE: 0.15791325418450985 MAPE: 179.58000583439403 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.5633955945238465e-15 NRMSE: 9.374618177749586e-16 MAPE: 1.067913693197097e-11 Pearson Correlation: 0.1703334422024056 Spearman Correlation: 0.118612451526827 Coefficient of Determination: -1.6141035489136142 RMSE: 0.35839229022437186 NRMSE: 0.25147865488609666 MAPE: 1105.8146732674038 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.02717742420756367, tolerance: 0.003113905664439024 positive)
Pearson Correlation: 0.9999994018383775 Spearman Correlation: 0.9999926791834391 Coefficient of Determination: 0.999998274066101 RMSE: 0.00031606300677093705 NRMSE: 0.00011558769996011449 MAPE: 1.4319940061689498 Pearson Correlation: 0.08786816587380125 Spearman Correlation: 0.03710021321961621 Coefficient of Determination: -1.2519691120403045 RMSE: 0.33264306978077135 NRMSE: 0.23341080159196384 MAPE: 980.283764923542 Predictor: RandomForests Pearson Correlation: 0.7177961736175155 Spearman Correlation: 0.5027357427248669 Coefficient of Determination: 0.23724900496410528 RMSE: 0.21011302693835182 NRMSE: 0.07684063302309531 MAPE: 236.2244392722236 Pearson Correlation: 0.20584912661484062 Spearman Correlation: 0.1455005673387449 Coefficient of Determination: 0.008788869771833463 RMSE: 0.22068882895684594 NRMSE: 0.15485413991386526 MAPE: 191.5834057518234 Protein: CDH1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.13712289650471754 RMSE: 1.2526616491661007 NRMSE: 0.19946206317730336 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.061578293423971475 RMSE: 0.970096042376724 NRMSE: 0.19071600723011914 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1747084136438477 NRMSE: 0.18704952288841878 MAPE: 547.6986763085636 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.045733924340672916 RMSE: 0.9628293412733254 NRMSE: 0.18928741030812832 MAPE: 293.35791980552335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 9.795749522937248e-15 NRMSE: 1.5597830519628748e-15 MAPE: 8.369053283473673e-12 Pearson Correlation: 0.3332478460041796 Spearman Correlation: 0.2730133792191923 Coefficient of Determination: -0.9035633574571298 RMSE: 1.2990395873580443 NRMSE: 0.2553846552428035 MAPE: 790.593517425018 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.2350328898654153, tolerance: 0.07424076431120771 positive)
Pearson Correlation: 0.9999999392829975 Spearman Correlation: 0.999998073469326 Coefficient of Determination: 0.9999998585734065 RMSE: 0.0004417693893219319 NRMSE: 7.034320393011876e-05 MAPE: 0.17184038282529074 Pearson Correlation: 0.39411647608132816 Spearman Correlation: 0.38216187234254795 Coefficient of Determination: -0.6614603050992123 RMSE: 1.2136227329910052 NRMSE: 0.23859213089116604 MAPE: 552.093499511449 Predictor: RandomForests Pearson Correlation: 0.7837746589873575 Spearman Correlation: 0.7447451728710385 Coefficient of Determination: 0.6070773776697997 RMSE: 0.7363488217577681 NRMSE: 0.11724926304222286 MAPE: 205.6536476840205 Pearson Correlation: 0.7416071623787494 Spearman Correlation: 0.5269904287861092 Coefficient of Determination: 0.5365292341871559 RMSE: 0.6409879875917828 NRMSE: 0.12601501741669932 MAPE: 145.6855322910714 Protein: CDH2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0032532184952558385 RMSE: 0.38185758840977485 NRMSE: 0.13836422509231644 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01322006783790175 RMSE: 0.3341656221976159 NRMSE: 0.1760731037776972 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3812379667395066 NRMSE: 0.13813970821780805 MAPE: 299.9887113984357 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002448103657870737 RMSE: 0.33238454882117896 NRMSE: 0.17513464962019673 MAPE: 611.0538495730829 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.9974789993494215e-15 NRMSE: 1.4484669176568672e-15 MAPE: 3.4577665611963896e-11 Pearson Correlation: 0.16644692668926098 Spearman Correlation: 0.23406526265913544 Coefficient of Determination: -1.526046125872695 RMSE: 0.5276312577970639 NRMSE: 0.2780108635936223 MAPE: 11012.458527175062 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.048676550319037816, tolerance: 0.007819420435861616 positive)
Pearson Correlation: 0.9999996927754101 Spearman Correlation: 0.9999970716732636 Coefficient of Determination: 0.9999991734362133 RMSE: 0.00034660460760184045 NRMSE: 0.0001255904803253281 MAPE: 1.0106343768709962 Pearson Correlation: 0.05711974349960184 Spearman Correlation: 0.13435828376912434 Coefficient of Determination: -1.1481687188421383 RMSE: 0.4865685920290055 NRMSE: 0.25637479294212784 MAPE: 612.9478243539811 Predictor: RandomForests Pearson Correlation: 0.6514835534697939 Spearman Correlation: 0.5582056677572438 Coefficient of Determination: 0.25481118845926676 RMSE: 0.32910107998366306 NRMSE: 0.11924816290443623 MAPE: 239.6242951611399 Pearson Correlation: -0.015780099212428848 Spearman Correlation: 0.01919475305178369 Coefficient of Determination: -0.04241949831474301 RMSE: 0.33894648995360294 NRMSE: 0.17859216070225883 MAPE: 2444.093497557562 Protein: CDH3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.2263418226753373e-05 RMSE: 0.21251306884336046 NRMSE: 0.14909431220418734 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004123239054339534 RMSE: 0.18871613277479948 NRMSE: 0.16414808838605816 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.21251070324919488 NRMSE: 0.14909265255738544 MAPE: 103.89275205351723 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003467816389364442 RMSE: 0.18865453225788167 NRMSE: 0.1640945073437436 MAPE: 99.8462680288512 Predictor: LinearRegression Pearson Correlation: 0.9999999999999994 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.7303453809990267e-15 NRMSE: 1.213970772997016e-15 MAPE: 8.781712993190385e-12 Pearson Correlation: 0.14043302297659457 Spearman Correlation: 0.13705158418434146 Coefficient of Determination: -1.4768634910590412 RMSE: 0.2963920529995713 NRMSE: 0.2578061991698238 MAPE: 589.1911345543424 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.019586636831659808, tolerance: 0.0024296509859561446 positive)
Pearson Correlation: 0.9999992282282449 Spearman Correlation: 0.999994220407978 Coefficient of Determination: 0.99999807191132 RMSE: 0.000295083082075652 NRMSE: 0.0002070235463852304 MAPE: 0.7333651757139504 Pearson Correlation: 0.1104836577332515 Spearman Correlation: 0.13979476053317375 Coefficient of Determination: -1.1129237175953253 RMSE: 0.2737520803021922 NRMSE: 0.23811361547417279 MAPE: 495.3201717136466 Predictor: RandomForests Pearson Correlation: 0.6924280779807354 Spearman Correlation: 0.6878409212762157 Coefficient of Determination: 0.3791233115704685 RMSE: 0.1674493574999244 NRMSE: 0.11747864223769743 MAPE: 528.1318381179526 Pearson Correlation: 0.37494010304723074 Spearman Correlation: 0.38487512313121114 Coefficient of Determination: 0.1369518415149572 RMSE: 0.17495768928596758 NRMSE: 0.1521807903885181 MAPE: 189.64329079817165 Protein: PTEN x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.023393971457565055 RMSE: 0.6366126117528933 NRMSE: 0.09954071014821253 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20813248536085016 RMSE: 0.517654316968625 NRMSE: 0.12376376344107133 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6292943186382643 NRMSE: 0.09839642227163854 MAPE: 299.798968451812 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06342466003107061 RMSE: 0.4856640113421529 NRMSE: 0.11611533767086332 MAPE: 95.15154235140719 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 4.820713495028665e-15 NRMSE: 7.537664756514213e-16 MAPE: 1.0689305966143655e-11 Pearson Correlation: 0.14372580873717403 Spearman Correlation: 0.22655394705669646 Coefficient of Determination: -2.73688877180833 RMSE: 0.9104113108476093 NRMSE: 0.21766635844871834 MAPE: 400.7937966865458 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.09925290547202299, tolerance: 0.02130541006350738 positive)
Pearson Correlation: 0.9999998505812662 Spearman Correlation: 0.9999984587754607 Coefficient of Determination: 0.9999996206253275 RMSE: 0.0003876037566764755 NRMSE: 6.0605700363767564e-05 MAPE: 0.6086107800627739 Pearson Correlation: 0.2542227832914584 Spearman Correlation: 0.29552737565306303 Coefficient of Determination: -1.0371527739963016 RMSE: 0.6721935778330833 NRMSE: 0.1607118963881517 MAPE: 273.92494776072556 Predictor: RandomForests Pearson Correlation: 0.6928125999048764 Spearman Correlation: 0.5911850278975127 Coefficient of Determination: 0.3427427001861867 RMSE: 0.5101777569396423 NRMSE: 0.07977136376196424 MAPE: 205.92068528065042 Pearson Correlation: 0.37054995124959 Spearman Correlation: 0.3789698125911795 Coefficient of Determination: 0.11781995200733186 RMSE: 0.4423450530119728 NRMSE: 0.10575839262945842 MAPE: 101.37081286889594 Protein: BRCA2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00289910117318648 RMSE: 0.19032543678137456 NRMSE: 0.12827584502559417 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0001649424828515933 RMSE: 0.21414907824527551 NRMSE: 0.14729386559180924 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19005014885410987 NRMSE: 0.12809030602412172 MAPE: 119.62157978309386 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0036761260410020924 RMSE: 0.2145246452772134 NRMSE: 0.14755218433114844 MAPE: 115.48540989652633 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 1.706665419240182e-15 NRMSE: 1.150261113444708e-15 MAPE: 5.83052649831008e-12 Pearson Correlation: -0.019411095463273215 Spearman Correlation: 0.016735869524557665 Coefficient of Determination: -1.142365430927533 RMSE: 0.3134203357803633 NRMSE: 0.21557362371318556 MAPE: 687.5632242312005 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.016713348940579256, tolerance: 0.0019432053784754488 positive)
Pearson Correlation: 0.9999991203412117 Spearman Correlation: 0.9999939892240666 Coefficient of Determination: 0.9999977258302518 RMSE: 0.0002866022880113121 NRMSE: 0.0001931646725873562 MAPE: 0.8350922376177001 Pearson Correlation: -0.00641547041698878 Spearman Correlation: 0.016710931557750098 Coefficient of Determination: -0.7409092896185887 RMSE: 0.28253253549482243 NRMSE: 0.194328687517503 MAPE: 475.074522272716 Predictor: RandomForests Pearson Correlation: 0.6732588104243932 Spearman Correlation: 0.6135155071083594 Coefficient of Determination: 0.29056485632193996 RMSE: 0.16007538807561786 NRMSE: 0.10788786838191698 MAPE: 171.81361037250835 Pearson Correlation: 0.1905033058406429 Spearman Correlation: 0.2386638237384506 Coefficient of Determination: 0.03622959627094613 RMSE: 0.21021668746259922 NRMSE: 0.1445891281063899 MAPE: 193.77679512434162 Protein: CDKN2A x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07669790023289091 RMSE: 0.6927164423772558 NRMSE: 0.16172871740223568 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04462654135164201 RMSE: 0.6710309035955896 NRMSE: 0.2071658496482324 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6675880639420501 NRMSE: 0.15586198728568595 MAPE: 307.97311558867955 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.004949645588538276 RMSE: 0.658164031136248 NRMSE: 0.20319348928290204 MAPE: 176.07940307985857 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 5.6441030974107035e-15 NRMSE: 1.3177304579311505e-15 MAPE: 4.471346471805532e-12 Pearson Correlation: 0.2639585096478528 Spearman Correlation: 0.3083903789324057 Coefficient of Determination: -0.6837045763845089 RMSE: 0.851912400205102 NRMSE: 0.26300898404035133 MAPE: 325.31133526729 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.09482405637269674, tolerance: 0.02397725168374273 positive)
Pearson Correlation: 0.9999998696301445 Spearman Correlation: 0.9999982083264389 Coefficient of Determination: 0.9999996976412997 RMSE: 0.00036708767059457053 NRMSE: 8.57040695261885e-05 MAPE: 0.37173414615667155 Pearson Correlation: 0.3653208267962707 Spearman Correlation: 0.3642165114278233 Coefficient of Determination: -0.15672021070138809 RMSE: 0.7061161677152934 NRMSE: 0.21799764370204483 MAPE: 269.73321145229255 Predictor: RandomForests Pearson Correlation: 0.6957018517544405 Spearman Correlation: 0.6829481630115467 Coefficient of Determination: 0.4688002358924771 RMSE: 0.4865612291470864 NRMSE: 0.11359759739145647 MAPE: 167.38414075524753 Pearson Correlation: 0.598769226183882 Spearman Correlation: 0.5696006184615768 Coefficient of Determination: 0.351500800466501 RMSE: 0.5287090152024128 NRMSE: 0.16322713568658354 MAPE: 102.42625000722347 Protein: TP53 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.043501333030021794 RMSE: 0.4597988418920562 NRMSE: 0.11050200478059512 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10290984727382035 RMSE: 0.4520547550562478 NRMSE: 0.16857084713604026 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45011280589110314 NRMSE: 0.10817419031269002 MAPE: 382.8265287953516 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010546813555600831 RMSE: 0.4327123127899972 NRMSE: 0.16135806629028604 MAPE: 261.16646791413905 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.570671589120532e-15 NRMSE: 8.581282357896016e-16 MAPE: 8.48815025531457e-12 Pearson Correlation: 0.19443649542007777 Spearman Correlation: 0.12364493322859388 Coefficient of Determination: -1.0548649851730585 RMSE: 0.6170390939005832 NRMSE: 0.2300933716800164 MAPE: 690.9667637057569 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.0543147468940046, tolerance: 0.010899962745861313 positive)
Pearson Correlation: 0.9999997899109695 Spearman Correlation: 0.9999973799182833 Coefficient of Determination: 0.9999994934696822 RMSE: 0.0003203495300978119 NRMSE: 7.698859170819801e-05 MAPE: 0.7456150416197728 Pearson Correlation: 0.32144751046384157 Spearman Correlation: 0.27828526540231174 Coefficient of Determination: -0.4268832488326073 RMSE: 0.514180088209564 NRMSE: 0.19173733287947672 MAPE: 805.1508057517121 Predictor: RandomForests Pearson Correlation: 0.7136745550601518 Spearman Correlation: 0.6044866719573476 Coefficient of Determination: 0.41493864564943617 RMSE: 0.3442881500018242 NRMSE: 0.08274168469161843 MAPE: 528.8030289421532 Pearson Correlation: 0.5214548866850929 Spearman Correlation: 0.4497088492375217 Coefficient of Determination: 0.23891961709998 RMSE: 0.3755227897987324 NRMSE: 0.14003214010520693 MAPE: 387.1948645644954 Protein: CTNNB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.43619721536848943 RMSE: 0.9218173342266688 NRMSE: 0.18131733560713392 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5414936126562622 RMSE: 0.7610450185362576 NRMSE: 0.2487969592128731 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.769197440300405 NRMSE: 0.15129768691982792 MAPE: 444.9197329351397 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.008633850443159563 RMSE: 0.6156108314583166 NRMSE: 0.2012523558986291 MAPE: 1384.0339648095894 Predictor: LinearRegression Pearson Correlation: 0.9999999999999994 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 6.2977755069919104e-15 NRMSE: 1.238744198857575e-15 MAPE: 4.96187776762438e-12 Pearson Correlation: 0.2779131077445549 Spearman Correlation: 0.2684297809199616 Coefficient of Determination: -1.306261742849241 RMSE: 0.9308801729409758 NRMSE: 0.30431860241948927 MAPE: 3846.3076615811965 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.12325298090377948, tolerance: 0.03183156097646061 positive)
Pearson Correlation: 0.9999998987565438 Spearman Correlation: 0.9999985743672472 Coefficient of Determination: 0.9999997617703462 RMSE: 0.0003754358495563394 NRMSE: 7.38465479064397e-05 MAPE: 0.12105504388810574 Pearson Correlation: 0.35981880155115087 Spearman Correlation: 0.3109939026671155 Coefficient of Determination: -0.5810559119879941 RMSE: 0.7707492256489924 NRMSE: 0.25196940915001875 MAPE: 1436.9381443504587 Predictor: RandomForests Pearson Correlation: 0.7019166497273588 Spearman Correlation: 0.680315302187137 Coefficient of Determination: 0.48355444444691364 RMSE: 0.5527771755514128 NRMSE: 0.10872879141451866 MAPE: 217.37556609839928 Pearson Correlation: 0.44173217409278925 Spearman Correlation: 0.2950435790969963 Coefficient of Determination: 0.17075073366586702 RMSE: 0.5581899730150711 NRMSE: 0.18248062147015956 MAPE: 1237.9047424718258 Protein: CCNE1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.3882525061775621 RMSE: 0.8073510115699897 NRMSE: 0.1948381908849554 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -3.2068608862157744 RMSE: 0.7484097025916991 NRMSE: 0.3260050104942715 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5224229806426052 NRMSE: 0.12607644873967835 MAPE: 105.82433067667067 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.010783677474574871 RMSE: 0.36685077747270034 NRMSE: 0.1597990928573857 MAPE: 133.3645349232411 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 3.217257015777862e-15 NRMSE: 7.764213180920101e-16 MAPE: 5.9899780286559e-13 Pearson Correlation: 0.5011569592607139 Spearman Correlation: 0.41738924425491597 Coefficient of Determination: -0.18410528426188288 RMSE: 0.39705941040000525 NRMSE: 0.17295788230169676 MAPE: 99.2690421294358 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.0533807297334704, tolerance: 0.014683406463848499 positive)
Pearson Correlation: 0.999999834986713 Spearman Correlation: 0.9999962817957279 Coefficient of Determination: 0.9999996510939506 RMSE: 0.00030858621554410136 NRMSE: 7.447117685742244e-05 MAPE: 0.045102378013181246 Pearson Correlation: 0.5789117149685993 Spearman Correlation: 0.37074028354468264 Coefficient of Determination: -0.1326868289374623 RMSE: 0.3883428012387634 NRMSE: 0.16916095362580624 MAPE: 120.32387825089752 Predictor: RandomForests Pearson Correlation: 0.8676463449655307 Spearman Correlation: 0.7287083312359415 Coefficient of Determination: 0.7477750454238562 RMSE: 0.26237128295289913 NRMSE: 0.06331811737164832 MAPE: 55.05739769386169 Pearson Correlation: 0.7790077361172058 Spearman Correlation: 0.668784818177528 Coefficient of Determination: 0.5683772967659345 RMSE: 0.239724528953781 NRMSE: 0.10442328220315415 MAPE: 82.11822550877005 Protein: CCND1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.44064885869713843 RMSE: 0.2936537728092399 NRMSE: 0.17653615611766113 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6507167710215811 RMSE: 0.2694738938084911 NRMSE: 0.2553456206196082 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2446563629208354 NRMSE: 0.14708033023580058 MAPE: 620.7522691796534 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.001046309206822027 RMSE: 0.20984928816127996 NRMSE: 0.19884707926551878 MAPE: 467.9744841225005 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 2.4817758519402056e-15 NRMSE: 1.4919718723715032e-15 MAPE: 8.740368314667169e-12 Pearson Correlation: 0.1696965939123641 Spearman Correlation: 0.2149577924911782 Coefficient of Determination: -1.4762337830513261 RMSE: 0.3300473409337173 NRMSE: 0.31274325654886836 MAPE: 711.9324449117424 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.023371786174244506, tolerance: 0.0032202923923696524 positive)
Pearson Correlation: 0.9999993830494106 Spearman Correlation: 0.9999948176323875 Coefficient of Determination: 0.9999984381518683 RMSE: 0.0003057566535084646 NRMSE: 0.00018381205799405118 MAPE: 0.801589012469891 Pearson Correlation: 0.18278343677195413 Spearman Correlation: 0.19561091784186838 Coefficient of Determination: -1.0490475733585591 RMSE: 0.30023162496020056 NRMSE: 0.28449075167028376 MAPE: 464.31186360361795 Predictor: RandomForests Pearson Correlation: 0.6236816549710236 Spearman Correlation: 0.5986275356684158 Coefficient of Determination: 0.30527983540112846 RMSE: 0.20392077243150597 NRMSE: 0.12259127125530893 MAPE: 472.0578370894177 Pearson Correlation: 0.3464088442810106 Spearman Correlation: 0.3364655419643636 Coefficient of Determination: 0.111115779342157 RMSE: 0.19774386315662015 NRMSE: 0.1873763307748478 MAPE: 330.7920931064097 Protein: ERBB2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08695701084953744 RMSE: 1.023008454816054 NRMSE: 0.1742863272085548 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1111491455026472 RMSE: 1.1242523174677488 NRMSE: 0.20280184671833265 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9812350184756391 NRMSE: 0.16716953481023547 MAPE: 603.8559553865388 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.003855375619400858 RMSE: 1.0685951227190735 NRMSE: 0.19276194579678793 MAPE: 271.61087792788993 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 4.9088228661419884e-15 NRMSE: 8.362987658895665e-16 MAPE: 4.372822751159517e-12 Pearson Correlation: 0.758508138846983 Spearman Correlation: 0.5269473770841352 Coefficient of Determination: 0.44374502042128916 RMSE: 0.7954530823633978 NRMSE: 0.14349034605011146 MAPE: 359.1637867832328 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.1363372821531408, tolerance: 0.05179983228777935 positive)
Pearson Correlation: 0.999999940667956 Spearman Correlation: 0.9999979578774076 Coefficient of Determination: 0.999999875742149 RMSE: 0.000345887572354621 NRMSE: 5.89276406553352e-05 MAPE: 0.34521173800127203 Pearson Correlation: 0.624970419281178 Spearman Correlation: 0.5674267352798527 Coefficient of Determination: 0.09785970289036017 RMSE: 1.013012150240544 NRMSE: 0.18273543369661305 MAPE: 451.91936066218784 Predictor: RandomForests Pearson Correlation: 0.8565821436770303 Spearman Correlation: 0.7329645447120364 Coefficient of Determination: 0.7240784956234974 RMSE: 0.5154253963896176 NRMSE: 0.08781119927587741 MAPE: 489.70348202070505 Pearson Correlation: 0.8551310426582696 Spearman Correlation: 0.7167488790355965 Coefficient of Determination: 0.7249236489007613 RMSE: 0.5593765300091448 NRMSE: 0.10090492279550199 MAPE: 165.28622323416 Protein: ERBB3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19951943522205973 RMSE: 0.4939516163098853 NRMSE: 0.17910620018705933 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.27774471248359456 RMSE: 0.5592204608326292 NRMSE: 0.15547938022732444 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.45100438700119294 NRMSE: 0.16353359186661914 MAPE: 236.3510406644846 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.014354579928456346 RMSE: 0.49825986274163775 NRMSE: 0.13853057975718017 MAPE: 161.2266540715406 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999884408153 Coefficient of Determination: 1.0 RMSE: 4.129327172594924e-15 NRMSE: 1.4972885497122503e-15 MAPE: 3.5193954063904847e-12 Pearson Correlation: 0.06225914147756646 Spearman Correlation: 0.04509033778476042 Coefficient of Determination: -1.600149300215679 RMSE: 0.7977377606761767 NRMSE: 0.2217940531524784 MAPE: 320.625651022312 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.06069292943392717, tolerance: 0.010943186691674512 positive)
Pearson Correlation: 0.9999997317329774 Spearman Correlation: 0.9999968019587183 Coefficient of Determination: 0.9999993184246196 RMSE: 0.00037233830182025217 NRMSE: 0.00013500937383569646 MAPE: 0.23939518623015726 Pearson Correlation: 0.18195111132935107 Spearman Correlation: 0.13503659646629013 Coefficient of Determination: -0.7995575491091471 RMSE: 0.6636573013265282 NRMSE: 0.18451582715688558 MAPE: 240.73602075942753 Predictor: RandomForests Pearson Correlation: 0.6420099745890312 Spearman Correlation: 0.6685899096171927 Coefficient of Determination: 0.3569447871314321 RMSE: 0.36166368076268185 NRMSE: 0.1311387704143712 MAPE: 214.13371761215893 Pearson Correlation: 0.35105154344946177 Spearman Correlation: 0.3883165625506553 Coefficient of Determination: 0.10032323329839155 RMSE: 0.46924997647253575 NRMSE: 0.13046499658651164 MAPE: 156.17083838918347 Fold: 4 Protein: RB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0017653619110491459 RMSE: 0.25173274438657 NRMSE: 0.09206141909982812 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11040193949010524 RMSE: 0.1737457828578019 NRMSE: 0.1664678101960314 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.25151083845224625 NRMSE: 0.09198026567153535 MAPE: 147.64229867735622 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07191864792141822 RMSE: 0.17070847378085216 NRMSE: 0.1635577298325721 MAPE: 100.86921066026429 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.2378810836845518e-15 NRMSE: 8.184175993580134e-16 MAPE: 1.0989995856266148e-11 Pearson Correlation: 0.02460172729340176 Spearman Correlation: 0.025164902305515036 Coefficient of Determination: -5.373846266999763 RMSE: 0.41626985197285554 NRMSE: 0.39883287852379523 MAPE: 487.6206119905971 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.02792175765118208, tolerance: 0.0034032643600116126 positive)
Pearson Correlation: 0.999999517599285 Spearman Correlation: 0.999994374530432 Coefficient of Determination: 0.999998569152203 RMSE: 0.0003008523613847394 NRMSE: 0.00011002500050641436 MAPE: 1.4839265162803006 Pearson Correlation: -0.02996916910702637 Spearman Correlation: -0.023628723550168956 Coefficient of Determination: -2.5721456545169032 RMSE: 0.3116296313217691 NRMSE: 0.29857589326808825 MAPE: 458.7831829003414 Predictor: RandomForests Pearson Correlation: 0.7225760308046884 Spearman Correlation: 0.5083660943085312 Coefficient of Determination: 0.24895265011992895 RMSE: 0.21796680788750722 NRMSE: 0.07971284665283325 MAPE: 190.7419025567395 Pearson Correlation: 0.1394122872202822 Spearman Correlation: 0.07113056272522102 Coefficient of Determination: -0.07045082481136578 RMSE: 0.17059155460927616 NRMSE: 0.16344570824481294 MAPE: 109.8280815398734 Protein: CDH1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1648542010437435 RMSE: 1.2077311247232185 NRMSE: 0.19230774891296748 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01787767410405383 RMSE: 1.1768276141426715 NRMSE: 0.21349508619837296 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.119011303751291 NRMSE: 0.17818083878718685 MAPE: 552.7314487209006 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06543533401046742 RMSE: 1.204005869039757 NRMSE: 0.21842565020132743 MAPE: 371.74257556440244 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 1.1598348827321778e-14 NRMSE: 1.846812016706757e-15 MAPE: 1.001863151135078e-11 Pearson Correlation: 0.30398644591282736 Spearman Correlation: 0.29043005523759646 Coefficient of Determination: -0.4205133833780801 RMSE: 1.390233409348486 NRMSE: 0.2522102625718381 MAPE: 597.6045772301114 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.22128444028151312, tolerance: 0.06736762282826622 positive)
Pearson Correlation: 0.9999999334599317 Spearman Correlation: 0.9999986899591415 Coefficient of Determination: 0.9999998417945887 RMSE: 0.0004450872367184915 NRMSE: 7.087150675432175e-05 MAPE: 0.1683051002637344 Pearson Correlation: 0.3669013747998655 Spearman Correlation: 0.33551789922567615 Coefficient of Determination: -0.05502879192110588 RMSE: 1.198111431824276 NRMSE: 0.21735630634307102 MAPE: 406.6018362902341 Predictor: RandomForests Pearson Correlation: 0.7714606323149839 Spearman Correlation: 0.7449609359001516 Coefficient of Determination: 0.587415533259798 RMSE: 0.7187716021018196 NRMSE: 0.11445043184959389 MAPE: 179.42789885100794 Pearson Correlation: 0.7749010958895801 Spearman Correlation: 0.5337685850677705 Coefficient of Determination: 0.5329045002768398 RMSE: 0.7972011153945301 NRMSE: 0.14462485312480136 MAPE: 160.26995747528287 Protein: CDH2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011628294333081435 RMSE: 0.38156283556505555 NRMSE: 0.1382574228440668 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.013534078125908788 RMSE: 0.33551468363995024 NRMSE: 0.17308132332546644 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.37936353519068666 NRMSE: 0.13746051713554847 MAPE: 710.5881065130027 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05716210705722724 RMSE: 0.34265979265615515 NRMSE: 0.1767672571582658 MAPE: 156.2941831769225 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999036734615 Coefficient of Determination: 1.0 RMSE: 5.788672778162182e-15 NRMSE: 2.0974972020299233e-15 MAPE: 1.3487486895220295e-10 Pearson Correlation: 0.05416750603932832 Spearman Correlation: 0.06810309355478249 Coefficient of Determination: -5.330349363067276 RMSE: 0.8385060359574911 NRMSE: 0.4325585179921851 MAPE: 752.2869598256589 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.049499563398624775, tolerance: 0.007742718020581794 positive)
Pearson Correlation: 0.9999996115990406 Spearman Correlation: 0.999997360652727 Coefficient of Determination: 0.9999989782553141 RMSE: 0.000383465924273813 NRMSE: 0.00013894699770773718 MAPE: 1.8994161942612582 Pearson Correlation: 0.03556243130250616 Spearman Correlation: -0.0032494170750258736 Coefficient of Determination: -1.4621365379899198 RMSE: 0.5229358552368293 NRMSE: 0.26976592754984796 MAPE: 606.961059444748 Predictor: RandomForests Pearson Correlation: 0.6558018218411404 Spearman Correlation: 0.5976947940878571 Coefficient of Determination: 0.23594672820017382 RMSE: 0.3316022003261343 NRMSE: 0.12015443159871524 MAPE: 850.3682061596894 Pearson Correlation: 0.22183133026028837 Spearman Correlation: 0.15962044414518886 Coefficient of Determination: 0.01019203909541555 RMSE: 0.3315643471513509 NRMSE: 0.17104347073549941 MAPE: 132.6704065554127 Protein: CDH3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.006306553616452382 RMSE: 0.206558346691537 NRMSE: 0.1472115018398285 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.056823148221427866 RMSE: 0.21361844422784051 NRMSE: 0.19012980777528213 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20591007570775374 NRMSE: 0.1467494873695809 MAPE: 176.325991624275 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1005327864052632 RMSE: 0.21799126008279185 NRMSE: 0.19402180615090855 MAPE: 208.37754625573632 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 1.5413903783108746e-15 NRMSE: 1.0985292831156368e-15 MAPE: 8.767138659758213e-12 Pearson Correlation: 0.17956282779799532 Spearman Correlation: 0.23194054788713075 Coefficient of Determination: -1.0948722744505885 RMSE: 0.3007574289745133 NRMSE: 0.26768733554169255 MAPE: 925.4084918313642 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.018981731590703706, tolerance: 0.002281064009154941 positive)
Pearson Correlation: 0.9999991986700519 Spearman Correlation: 0.9999942974689863 Coefficient of Determination: 0.9999979564097449 RMSE: 0.0002943570960734064 NRMSE: 0.0002097845518432989 MAPE: 0.9022610216037785 Pearson Correlation: 0.06425520667250298 Spearman Correlation: 0.10903128467936009 Coefficient of Determination: -1.2266367776156781 RMSE: 0.3100718055592462 NRMSE: 0.2759775402382168 MAPE: 4750.2971571989565 Predictor: RandomForests Pearson Correlation: 0.6799218667479393 Spearman Correlation: 0.6469527986095693 Coefficient of Determination: 0.35359512337925214 RMSE: 0.16555027647493126 NRMSE: 0.11798557269761481 MAPE: 386.07945615794455 Pearson Correlation: 0.43816397651498784 Spearman Correlation: 0.38003715757054335 Coefficient of Determination: 0.12469709569420939 RMSE: 0.1944091824276856 NRMSE: 0.1730327201770169 MAPE: 513.5713598477581 Protein: PTEN x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04663541191913323 RMSE: 0.5747314783713694 NRMSE: 0.11117523181123673 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02346833201832421 RMSE: 0.7542692946958974 NRMSE: 0.11793750210239971 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5617812913173108 NRMSE: 0.10867016622510654 MAPE: 273.58744447275507 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -9.071346738909192e-05 RMSE: 0.7456051878529003 NRMSE: 0.116582782871222 MAPE: 431.7164518946501 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 5.208608328628426e-15 NRMSE: 1.0075457150704941e-15 MAPE: 4.150373849772592e-12 Pearson Correlation: 0.20305145422815715 Spearman Correlation: 0.17110188406339233 Coefficient of Determination: -1.1397077573622325 RMSE: 1.0906024135003325 NRMSE: 0.17052652857483114 MAPE: 1256.1021216928968 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.08258449422957867, tolerance: 0.016979184196949017 positive)
Pearson Correlation: 0.9999998236510308 Spearman Correlation: 0.9999983817142337 Coefficient of Determination: 0.9999995543692579 RMSE: 0.0003750203576481179 NRMSE: 7.254339942125462e-05 MAPE: 0.3710211241383829 Pearson Correlation: 0.21747769802336814 Spearman Correlation: 0.2198755595456303 Coefficient of Determination: -0.2611742569895841 RMSE: 0.8372916738440338 NRMSE: 0.1309188763730801 MAPE: 1585.3985397032807 Predictor: RandomForests Pearson Correlation: 0.6773500887205246 Spearman Correlation: 0.5799112015775666 Coefficient of Determination: 0.3150970444484219 RMSE: 0.4649238143477672 NRMSE: 0.08993419497596858 MAPE: 151.52880426825575 Pearson Correlation: 0.3874255047968377 Spearman Correlation: 0.4052893427598848 Coefficient of Determination: 0.1137195723625486 RMSE: 0.7018992900551726 NRMSE: 0.1097489312884329 MAPE: 178.79443408177806 Protein: BRCA2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0015699866052385492 RMSE: 0.1919477679021074 NRMSE: 0.12365776640496533 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0014129332580739007 RMSE: 0.2082543553514594 NRMSE: 0.20232423210836328 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.19179726737953795 NRMSE: 0.12356081003674535 MAPE: 107.48807270602099 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.1477874262144638e-06 RMSE: 0.20810750575528378 NRMSE: 0.20218156411118496 MAPE: 135.86303542792692 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999229387699 Coefficient of Determination: 1.0 RMSE: 3.733245774265368e-15 NRMSE: 2.405054452739809e-15 MAPE: 8.970642613506814e-12 Pearson Correlation: 0.27880031083172657 Spearman Correlation: 0.2853676479756606 Coefficient of Determination: -0.8383242995537545 RMSE: 0.2821620219390438 NRMSE: 0.2741273493301763 MAPE: 1521.317972184486 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.018805364541188415, tolerance: 0.001979097117455079 positive)
Pearson Correlation: 0.9999990712006597 Spearman Correlation: 0.9999936039176726 Coefficient of Determination: 0.9999975184021997 RMSE: 0.00030213992219905924 NRMSE: 0.00019464643079340264 MAPE: 0.3703845736660112 Pearson Correlation: 0.26053448795668116 Spearman Correlation: 0.230698637140114 Coefficient of Determination: -1.136695048699858 RMSE: 0.3041996896558293 NRMSE: 0.2955374859428445 MAPE: 1509.664273349417 Predictor: RandomForests Pearson Correlation: 0.6664447980817361 Spearman Correlation: 0.5562736763413593 Coefficient of Determination: 0.2665383001962198 RMSE: 0.16425974171431992 NRMSE: 0.10582041663025926 MAPE: 138.79126687280598 Pearson Correlation: 0.41441070938408203 Spearman Correlation: 0.4414693450043019 Coefficient of Determination: 0.10912043172065633 RMSE: 0.19642510511827307 NRMSE: 0.19083182434667212 MAPE: 249.1803900747528 Protein: CDKN2A x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06343046233027927 RMSE: 0.6950010485750925 NRMSE: 0.15711564339891315 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10006794882547432 RMSE: 0.6614783461565592 NRMSE: 0.1993004959796804 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6739550183850767 NRMSE: 0.1523578655781794 MAPE: 281.71125082022354 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0022276354551518107 RMSE: 0.6313774446715202 NRMSE: 0.19023122768048215 MAPE: 197.14658329930893 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 5.759544503524677e-15 NRMSE: 1.302033345433407e-15 MAPE: 7.437434504094144e-12 Pearson Correlation: 0.17443151018833897 Spearman Correlation: 0.13310639783538447 Coefficient of Determination: -0.9065825128374523 RMSE: 0.8708305952129225 NRMSE: 0.2623774013898531 MAPE: 590.377513456902 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.09639582276059523, tolerance: 0.024436786734185888 positive)
Pearson Correlation: 0.9999998751486713 Spearman Correlation: 0.9999986706938095 Coefficient of Determination: 0.9999997056978694 RMSE: 0.00036561803865274264 NRMSE: 8.265356361540467e-05 MAPE: 0.21907187637298786 Pearson Correlation: 0.2974702211091961 Spearman Correlation: 0.30405616030125066 Coefficient of Determination: -0.6203747754131876 RMSE: 0.8028115519977695 NRMSE: 0.24188356492852353 MAPE: 435.74345899142503 Predictor: RandomForests Pearson Correlation: 0.7029469523162342 Spearman Correlation: 0.6612963979885785 Coefficient of Determination: 0.4807179094514076 RMSE: 0.48566027759591185 NRMSE: 0.10979095232189709 MAPE: 157.72893381194876 Pearson Correlation: 0.5903117405553691 Spearman Correlation: 0.4731555256299954 Coefficient of Determination: 0.3303788054024617 RMSE: 0.5160840913531727 NRMSE: 0.15549385096510174 MAPE: 132.95188022382933 Protein: TP53 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.04782361373877353 RMSE: 0.460756629216985 NRMSE: 0.11073218678610552 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07696826201632412 RMSE: 0.4481222561682025 NRMSE: 0.1422068596624151 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4501191620264231 NRMSE: 0.10817571786263473 MAPE: 418.8529054417374 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.002447694094247499 RMSE: 0.4323405014905614 NRMSE: 0.13719868668778923 MAPE: 185.65040333639752 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 4.8870034712335025e-15 NRMSE: 1.1744781233437884e-15 MAPE: 1.3391101185057581e-11 Pearson Correlation: 0.22492383839803665 Spearman Correlation: 0.22126211050013092 Coefficient of Determination: -1.368309643197561 RMSE: 0.6645295581589327 NRMSE: 0.21088142871253257 MAPE: 618.9957831539189 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.05523811939465489, tolerance: 0.01090027058925727 positive)
Pearson Correlation: 0.9999997981814442 Spearman Correlation: 0.9999982853876674 Coefficient of Determination: 0.9999994994722345 RMSE: 0.00031845024590075436 NRMSE: 7.653214273029425e-05 MAPE: 0.8447346297422123 Pearson Correlation: 0.24484810899564582 Spearman Correlation: 0.2873128093866507 Coefficient of Determination: -0.42293249733094984 RMSE: 0.515094853132403 NRMSE: 0.16345990515752823 MAPE: 456.63207119677384 Predictor: RandomForests Pearson Correlation: 0.7065417744632847 Spearman Correlation: 0.6140973281867749 Coefficient of Determination: 0.40404636576236863 RMSE: 0.3474831405030404 NRMSE: 0.08350952667701043 MAPE: 642.2713139627435 Pearson Correlation: 0.5729931561012098 Spearman Correlation: 0.44041197521166103 Coefficient of Determination: 0.27126595160065003 RMSE: 0.36862059185398893 NRMSE: 0.11697784712299725 MAPE: 219.79707795257738 Protein: CTNNB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.6170193939500923 RMSE: 0.9046651382507068 NRMSE: 0.21849703851094263 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09478783275970826 RMSE: 0.8396248247596424 NRMSE: 0.17652527641906535 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7114268313676598 NRMSE: 0.17182562828897205 MAPE: 631.8785214716299 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.1509513869220498 RMSE: 0.8608922137524758 NRMSE: 0.18099659695409887 MAPE: 930.3723381287335 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 1.0667203185403526e-14 NRMSE: 2.576370202251842e-15 MAPE: 6.385708430747186e-12 Pearson Correlation: 0.2507282449626308 Spearman Correlation: 0.29478921183555906 Coefficient of Determination: -0.4465580341186406 RMSE: 0.9651353447644576 NRMSE: 0.20291298981676428 MAPE: 1767.010750321888 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.10721409875444163, tolerance: 0.02722969373777278 positive)
Pearson Correlation: 0.9999998999972971 Spearman Correlation: 0.999998786285607 Coefficient of Determination: 0.999999753603833 RMSE: 0.0003531402452748341 NRMSE: 8.529133544460297e-05 MAPE: 0.1703599304760847 Pearson Correlation: 0.1800987215405159 Spearman Correlation: 0.27271412361750147 Coefficient of Determination: -0.393837184344636 RMSE: 0.9473845823137873 NRMSE: 0.1991810155398594 MAPE: 873.7391916507763 Predictor: RandomForests Pearson Correlation: 0.6660930547899048 Spearman Correlation: 0.6646964293196804 Coefficient of Determination: 0.4256293614679202 RMSE: 0.5391707900816562 NRMSE: 0.1302219085309768 MAPE: 471.1659907121157 Pearson Correlation: 0.6654976493148846 Spearman Correlation: 0.4338333395678251 Coefficient of Determination: 0.30078958723017746 RMSE: 0.6710026467651349 NRMSE: 0.14107363694498673 MAPE: 487.000619084844 Protein: CCNE1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.4688329016852353 RMSE: 0.7931748470731899 NRMSE: 0.19141705409976348 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -2.186170633384966 RMSE: 0.8069776954058596 NRMSE: 0.32929800677624244 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5048043460690237 NRMSE: 0.12182453992060809 MAPE: 103.07374645056161 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01570191691728584 RMSE: 0.4556277343037054 NRMSE: 0.18592497115143453 MAPE: 142.6844229696492 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 5.921255735913024e-15 NRMSE: 1.4289779028194668e-15 MAPE: 1.0498751146017637e-12 Pearson Correlation: 0.6334075522106243 Spearman Correlation: 0.4333345802316737 Coefficient of Determination: 0.17018616453316437 RMSE: 0.41182940429389714 NRMSE: 0.16805247869660378 MAPE: 91.86629490074655 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.04978401994174096, tolerance: 0.013709715616187399 positive)
Pearson Correlation: 0.9999998342632318 Spearman Correlation: 0.9999946057141129 Coefficient of Determination: 0.9999996459476921 RMSE: 0.0003003701698310369 NRMSE: 7.248839680262493e-05 MAPE: 0.05039917176637391 Pearson Correlation: 0.603323755249837 Spearman Correlation: 0.47375403683337697 Coefficient of Determination: 0.1055285253092989 RMSE: 0.42757299067782745 NRMSE: 0.1744768590050712 MAPE: 75.59970452860864 Predictor: RandomForests Pearson Correlation: 0.864915042734293 Spearman Correlation: 0.7179887524739937 Coefficient of Determination: 0.7417469457788115 RMSE: 0.25653452307887725 NRMSE: 0.06190953087310309 MAPE: 54.652374513447334 Pearson Correlation: 0.8326951434112377 Spearman Correlation: 0.7080843293856951 Coefficient of Determination: 0.6871927367893959 RMSE: 0.2528514393555218 NRMSE: 0.10317940070004156 MAPE: 76.73295374208088 Protein: CCND1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47371951525638445 RMSE: 0.2917253166285864 NRMSE: 0.18637975276867558 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.47112550847095647 RMSE: 0.27775626016480953 NRMSE: 0.17517423067911803 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.24030715541494438 NRMSE: 0.1535293156329106 MAPE: 629.3779223443613 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0012863337397839292 RMSE: 0.22914909022901284 NRMSE: 0.14451885105260648 MAPE: 484.2269192422971 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.6476071313605435e-15 NRMSE: 2.3304117832384862e-15 MAPE: 1.0957427366568788e-11 Pearson Correlation: 0.17395965422413157 Spearman Correlation: 0.22431451763737706 Coefficient of Determination: -3.664401670839668 RMSE: 0.4945804713707761 NRMSE: 0.3119200752842937 MAPE: 702.4735925794184 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.022561263221611554, tolerance: 0.003106817057166876 positive)
Pearson Correlation: 0.9999994116285668 Spearman Correlation: 0.9999930644895738 Coefficient of Determination: 0.9999984751509864 RMSE: 0.0002967427548347008 NRMSE: 0.00018958533294661503 MAPE: 0.9439461540719196 Pearson Correlation: 0.22109796843024287 Spearman Correlation: 0.2572825097569795 Coefficient of Determination: -0.6593150966020351 RMSE: 0.2949873722815195 NRMSE: 0.18604148100499465 MAPE: 665.7390102125943 Predictor: RandomForests Pearson Correlation: 0.656238065769627 Spearman Correlation: 0.5997805912746115 Coefficient of Determination: 0.29217614716622475 RMSE: 0.20217586015275077 NRMSE: 0.12916769537365402 MAPE: 459.03860084660505 Pearson Correlation: 0.5206422440815077 Spearman Correlation: 0.46997842865871153 Coefficient of Determination: 0.19142906837339524 RMSE: 0.20591977505764983 NRMSE: 0.12986867750860862 MAPE: 522.0283392929606 Protein: ERBB2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06177154229692228 RMSE: 1.0106646016782141 NRMSE: 0.1721833486682819 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.26989975035857605 RMSE: 1.1682171872252598 NRMSE: 0.21036071365744585 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.9808249714864398 NRMSE: 0.1670996765569688 MAPE: 529.9728174248761 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08086501696556425 RMSE: 1.07776630779691 NRMSE: 0.19407323581894154 MAPE: 193.8969179437583 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 5.77578870651042e-15 NRMSE: 9.840006655383444e-16 MAPE: 6.049257998114733e-12 Pearson Correlation: 0.6526867911420955 Spearman Correlation: 0.4807297855709987 Coefficient of Determination: 0.1442834204543183 RMSE: 0.958967404822067 NRMSE: 0.17268113314763334 MAPE: 397.37417902289627 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.1397300550249389, tolerance: 0.051756548208396 positive)
Pearson Correlation: 0.999999943359572 Spearman Correlation: 0.9999983431835574 Coefficient of Determination: 0.9999998801948066 RMSE: 0.00033949183740003097 NRMSE: 5.78380219432051e-05 MAPE: 0.28783924128572164 Pearson Correlation: 0.6301647867512165 Spearman Correlation: 0.4573628815361372 Coefficient of Determination: 0.15184229808195104 RMSE: 0.954722543722798 NRMSE: 0.1719167615735942 MAPE: 372.76012316838643 Predictor: RandomForests Pearson Correlation: 0.8707214577314464 Spearman Correlation: 0.7286875588781138 Coefficient of Determination: 0.7483362456117535 RMSE: 0.4920416315897412 NRMSE: 0.08382739008633171 MAPE: 330.81098550743536 Pearson Correlation: 0.7891227461982633 Spearman Correlation: 0.6630947096465283 Coefficient of Determination: 0.5837248591838273 RMSE: 0.6688505841975679 NRMSE: 0.12043983581185723 MAPE: 180.9623991684271 Protein: ERBB3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.20254353309139272 RMSE: 0.523865801474932 NRMSE: 0.14324270860276114 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.287905849531515 RMSE: 0.4364451552160674 NRMSE: 0.21482088883335748 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.47771584309754367 NRMSE: 0.13062374202531005 MAPE: 235.519389189253 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0005048679199346484 RMSE: 0.38467788722430457 NRMSE: 0.189340733103459 MAPE: 219.86225912389727 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 0.9999999036734615 Coefficient of Determination: 1.0 RMSE: 6.333000532138822e-15 NRMSE: 1.7316575108591083e-15 MAPE: 5.617264560507769e-12 Pearson Correlation: 0.019452902099242452 Spearman Correlation: 0.04581852641554134 Coefficient of Determination: -2.9934811603005262 RMSE: 0.7685346256893578 NRMSE: 0.3782772919270146 MAPE: 408.00581358476586 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.06433776806593328, tolerance: 0.012277828558956158 positive)
Pearson Correlation: 0.9999997790961097 Spearman Correlation: 0.9999975147751958 Coefficient of Determination: 0.9999994406922605 RMSE: 0.0003572687735102741 NRMSE: 9.768942097902327e-05 MAPE: 0.2263170307074639 Pearson Correlation: 0.05787551401625609 Spearman Correlation: 0.11354006907816806 Coefficient of Determination: -1.5399056916739702 RMSE: 0.6129095872555879 NRMSE: 0.3016777268235431 MAPE: 425.853557768633 Predictor: RandomForests Pearson Correlation: 0.6404762821648678 Spearman Correlation: 0.6518852299272261 Coefficient of Determination: 0.3543028516203608 RMSE: 0.3838699169965599 NRMSE: 0.10496307738907738 MAPE: 219.6845688342829 Pearson Correlation: 0.3953364072869352 Spearman Correlation: 0.3147146473148045 Coefficient of Determination: 0.14239345721417151 RMSE: 0.35614894476312475 NRMSE: 0.17529861875359912 MAPE: 231.63462602213386 Fold: 5 Protein: RB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00018503513771928048 RMSE: 0.23392670305630597 NRMSE: 0.11556330212293363 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.12340187398900859 RMSE: 0.2547692202160761 NRMSE: 0.12845593258580365 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.23390506372942843 NRMSE: 0.1155526119706893 MAPE: 104.87158603787556 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.11427719172534156 RMSE: 0.2537324461104516 NRMSE: 0.12793318582500635 MAPE: 129.58345316470897 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.0164123541647587e-15 NRMSE: 9.961379656287865e-16 MAPE: 6.781565115061541e-12 Pearson Correlation: -0.015551993052531804 Spearman Correlation: 0.017843115250813606 Coefficient of Determination: -1.8886018020453688 RMSE: 0.4085293139739565 NRMSE: 0.2059825514662064 MAPE: 3025.380091105121 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.026152939511134354, tolerance: 0.002943482941498817 positive)
Pearson Correlation: 0.9999992434548131 Spearman Correlation: 0.9999922938773043 Coefficient of Determination: 0.9999979010079538 RMSE: 0.0003388792835402751 NRMSE: 0.00016741145202880852 MAPE: 0.5475631866737152 Pearson Correlation: 0.029951275221980204 Spearman Correlation: 0.03308520056359805 Coefficient of Determination: -0.7543334989253554 RMSE: 0.3183724386009224 NRMSE: 0.16052499778196277 MAPE: 1016.2504740826229 Predictor: RandomForests Pearson Correlation: 0.6783386625531739 Spearman Correlation: 0.4831347850710659 Coefficient of Determination: 0.27178822706866934 RMSE: 0.1996036468246194 NRMSE: 0.09860719721801346 MAPE: 159.4998818202044 Pearson Correlation: 0.007713217113177628 Spearman Correlation: 0.06058679035898204 Coefficient of Determination: -0.14725946049093253 RMSE: 0.2574602636412438 NRMSE: 0.12981277032513353 MAPE: 247.74130766407612 Protein: CDH1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10476316856458312 RMSE: 1.1835893765747125 NRMSE: 0.18846364392451076 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.19786466090973764 RMSE: 1.2714981376898562 NRMSE: 0.2500438806886504 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.1260727912856485 NRMSE: 0.17930524366829853 MAPE: 266.31463004312263 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.01718399286470018 RMSE: 1.1716869980595492 NRMSE: 0.23041572398960675 MAPE: 1066.779337530299 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 7.923825856309085e-15 NRMSE: 1.261715527580186e-15 MAPE: 3.29031812079552e-12 Pearson Correlation: 0.3887141826149449 Spearman Correlation: 0.4079128168680408 Coefficient of Determination: -0.3759158062534862 RMSE: 1.3627236149577993 NRMSE: 0.267983641414682 MAPE: 2002.3792511234167 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.22362805788916437, tolerance: 0.0682205483025332 positive)
Pearson Correlation: 0.9999999348877983 Spearman Correlation: 0.999997996408099 Coefficient of Determination: 0.9999998475456299 RMSE: 0.000439679689148369 NRMSE: 7.001045972236059e-05 MAPE: 0.13429659393170232 Pearson Correlation: 0.39255081686201626 Spearman Correlation: 0.3760071821344406 Coefficient of Determination: -0.17603281426647888 RMSE: 1.2598579243894736 NRMSE: 0.24775479821232105 MAPE: 1720.854858517966 Predictor: RandomForests Pearson Correlation: 0.8033132433941932 Spearman Correlation: 0.7261862820838294 Coefficient of Determination: 0.6379708510845339 RMSE: 0.6775451402747265 NRMSE: 0.10788591768967969 MAPE: 134.74705284936718 Pearson Correlation: 0.6576963458298704 Spearman Correlation: 0.6479407473908653 Coefficient of Determination: 0.423965172160062 RMSE: 0.8817312297755799 NRMSE: 0.17339506199987806 MAPE: 427.48369490819283 Protein: CDH2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0016678089051440637 RMSE: 0.3594357673583712 NRMSE: 0.1765314902796381 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02548752338232485 RMSE: 0.4223734458481898 NRMSE: 0.15794680397441796 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.3591364066768649 NRMSE: 0.17638446376743033 MAPE: 194.85580080652326 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.015496238790634331 RMSE: 0.4203108256119444 NRMSE: 0.15717548589718017 MAPE: 597.5744423992059 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.0098302169420543e-15 NRMSE: 1.4782330027710102e-15 MAPE: 1.5843156989295307e-11 Pearson Correlation: 0.1773319578350455 Spearman Correlation: 0.12657530215511548 Coefficient of Determination: -0.9896135232463796 RMSE: 0.5883229340211502 NRMSE: 0.2200037148331807 MAPE: 33435.834560429976 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.044966301557004866, tolerance: 0.0069390679727214565 positive)
Pearson Correlation: 0.9999996409749042 Spearman Correlation: 0.9999973413875684 Coefficient of Determination: 0.9999990342537917 RMSE: 0.00035293192010209137 NRMSE: 0.00017333722317277705 MAPE: 1.5828969930605636 Pearson Correlation: 0.18674357294695326 Spearman Correlation: 0.09505866040564057 Coefficient of Determination: -0.40910455212952046 RMSE: 0.4951115130325437 NRMSE: 0.18514724792272075 MAPE: 968.6259650422003 Predictor: RandomForests Pearson Correlation: 0.7042236143798442 Spearman Correlation: 0.6046870643632349 Coefficient of Determination: 0.24733514324737826 RMSE: 0.31157331304101016 NRMSE: 0.15302456315554744 MAPE: 602.654823149021 Pearson Correlation: 0.14740457964469422 Spearman Correlation: 0.15665302142560267 Coefficient of Determination: 0.0024068296222262697 RMSE: 0.4165893373675731 NRMSE: 0.1557838331311157 MAPE: 598.2572302685898 Protein: CDH3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011481892643820935 RMSE: 0.2038847376288621 NRMSE: 0.14304087222095618 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0026977014897064944 RMSE: 0.22369326249691865 NRMSE: 0.20181818899206835 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.20376778919497535 NRMSE: 0.14295882387254824 MAPE: 138.24263272508912 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0068637330351872805 RMSE: 0.22415748377157613 NRMSE: 0.2022370138413159 MAPE: 106.84313660859539 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.999999980734693 Coefficient of Determination: 1.0 RMSE: 1.7374737138114272e-15 NRMSE: 1.2189718483831643e-15 MAPE: 5.064289011507606e-12 Pearson Correlation: 0.26784731992177246 Spearman Correlation: 0.3277771543286076 Coefficient of Determination: -1.1870363718185954 RMSE: 0.3303664197002644 NRMSE: 0.29805972599921005 MAPE: 680.6111141007076 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.018314925244650743, tolerance: 0.0022338465809413456 positive)
Pearson Correlation: 0.9999992372504807 Spearman Correlation: 0.9999956653059004 Coefficient of Determination: 0.9999980427463689 RMSE: 0.00028507496998141264 NRMSE: 0.00020000208367108144 MAPE: 1.0802366637439105 Pearson Correlation: 0.2694344886538322 Spearman Correlation: 0.2790733051534309 Coefficient of Determination: -0.7397213287440252 RMSE: 0.2946508768571592 NRMSE: 0.2658368235523229 MAPE: 420.40049715698854 Predictor: RandomForests Pearson Correlation: 0.6921762067557307 Spearman Correlation: 0.6682280812773254 Coefficient of Determination: 0.3584666473326411 RMSE: 0.1632093944568012 NRMSE: 0.11450398106920441 MAPE: 459.39492860894546 Pearson Correlation: 0.5148936049404612 Spearman Correlation: 0.5287821543909526 Coefficient of Determination: 0.20350938813679453 RMSE: 0.19936927267564195 NRMSE: 0.17987285402759132 MAPE: 150.37739980492276 Protein: PTEN x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05240378988513572 RMSE: 0.5837468026637292 NRMSE: 0.09127461538014686 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.011774083334460839 RMSE: 0.7259408088203396 NRMSE: 0.14042494754339593 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.5690275755039937 NRMSE: 0.08897311789601967 MAPE: 304.4741530818047 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.005181468299075398 RMSE: 0.7235718660416283 NRMSE: 0.13996670265429206 MAPE: 391.1377632658283 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 5.967730448311835e-15 NRMSE: 9.331139783147266e-16 MAPE: 6.524143070386888e-12 Pearson Correlation: 0.1278524540039685 Spearman Correlation: 0.17194478734148808 Coefficient of Determination: -0.7775314735246739 RMSE: 0.9622060543743117 NRMSE: 0.18612775734569634 MAPE: 1165.9821806327243 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.08405251035768291, tolerance: 0.017420030134596684 positive)
Pearson Correlation: 0.999999826636928 Spearman Correlation: 0.9999976881631911 Coefficient of Determination: 0.9999995685950251 RMSE: 0.00037374542710551413 NRMSE: 5.8438812775469336e-05 MAPE: 0.3333613513933065 Pearson Correlation: 0.27289132332399096 Spearman Correlation: 0.2728986645718775 Coefficient of Determination: -0.17225076615928314 RMSE: 0.7813933273000393 NRMSE: 0.15115160308341832 MAPE: 1259.8010698804792 Predictor: RandomForests Pearson Correlation: 0.630891916778191 Spearman Correlation: 0.5791259976247204 Coefficient of Determination: 0.3194941145079424 RMSE: 0.4694066695450981 NRMSE: 0.07339639895943993 MAPE: 254.19748265721432 Pearson Correlation: 0.4329198321093795 Spearman Correlation: 0.46943770769692306 Coefficient of Determination: 0.15074072013978734 RMSE: 0.6650887260889039 NRMSE: 0.1286538080487666 MAPE: 382.2277784216515 Protein: BRCA2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00015423459462815536 RMSE: 0.20048365981157823 NRMSE: 0.1291568109593031 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.08467605477038265 RMSE: 0.17297650483593724 NRMSE: 0.22621657599677922 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2004682008417859 NRMSE: 0.12914685188712252 MAPE: 103.40013592147379 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.09362463084794648 RMSE: 0.17368856719702494 NRMSE: 0.22714780252013983 MAPE: 102.28930277689045 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.999999884408153 Coefficient of Determination: 1.0 RMSE: 2.1480586768965383e-15 NRMSE: 1.3838355141868503e-15 MAPE: 6.077792417108761e-12 Pearson Correlation: 0.04221681936852586 Spearman Correlation: 0.06342473098168307 Coefficient of Determination: -3.1806615767173936 RMSE: 0.3395936787199371 NRMSE: 0.4441164960700152 MAPE: 572.2259353264366 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.01965632657376603, tolerance: 0.0021620874757223526 positive)
Pearson Correlation: 0.9999988756461483 Spearman Correlation: 0.999994220407317 Coefficient of Determination: 0.9999971965380057 RMSE: 0.0003356547744837031 NRMSE: 0.00021623757415603357 MAPE: 1.0647158418320597 Pearson Correlation: 0.12202129973983404 Spearman Correlation: 0.13783463634209905 Coefficient of Determination: -1.258490239610714 RMSE: 0.24960093054337743 NRMSE: 0.32642507100422075 MAPE: 464.77228531295196 Predictor: RandomForests Pearson Correlation: 0.6567881160663354 Spearman Correlation: 0.5759082456524208 Coefficient of Determination: 0.28322453311114804 RMSE: 0.16972157715548578 NRMSE: 0.1093390737030026 MAPE: 191.07275278281492 Pearson Correlation: 0.24614851585692804 Spearman Correlation: 0.21492786693100913 Coefficient of Determination: -0.01947728338674537 RMSE: 0.1676972217194141 NRMSE: 0.21931239353876164 MAPE: 175.56127343870628 Protein: CDKN2A x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.06876053865938014 RMSE: 0.7026668514343448 NRMSE: 0.1789276696377339 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.07452018232747903 RMSE: 0.6281215662347416 NRMSE: 0.15805378984795088 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.6796874655065666 NRMSE: 0.1730761797526334 MAPE: 274.2442116656758 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00044725008449963966 RMSE: 0.6060849693149379 NRMSE: 0.15250873639690443 MAPE: 274.3248072759207 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 6.912596024827223e-15 NRMSE: 1.7602291830682244e-15 MAPE: 6.544580677345669e-12 Pearson Correlation: 0.31912140903817365 Spearman Correlation: 0.3531141286050949 Coefficient of Determination: -0.7295367148705638 RMSE: 0.7968953804362784 NRMSE: 0.2005222265258243 MAPE: 699.0497286191676 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.0995055601312292, tolerance: 0.024854257731250624 positive)
Pearson Correlation: 0.9999998830310413 Spearman Correlation: 0.9999990752652764 Coefficient of Determination: 0.9999997222048164 RMSE: 0.0003582379712596838 NRMSE: 9.122201402044354e-05 MAPE: 0.4326873396948164 Pearson Correlation: 0.35257792594348647 Spearman Correlation: 0.3500068579408721 Coefficient of Determination: -0.28821954240013237 RMSE: 0.6877512018050219 NRMSE: 0.17305835328880045 MAPE: 663.4258336829533 Predictor: RandomForests Pearson Correlation: 0.720378014765877 Spearman Correlation: 0.6864760427094371 Coefficient of Determination: 0.5120733450169936 RMSE: 0.4747735683525569 NRMSE: 0.12089673508506453 MAPE: 132.89781022471126 Pearson Correlation: 0.38009326679491345 Spearman Correlation: 0.3909400366588113 Coefficient of Determination: -0.04885278644631885 RMSE: 0.6205741549261026 NRMSE: 0.156154640025692 MAPE: 466.27245635193685 Protein: TP53 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0629013951002304 RMSE: 0.43691826486349494 NRMSE: 0.11112140819031384 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.02793228386718627 RMSE: 0.5354711484549424 NRMSE: 0.14342336907859712 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4237929343776606 NRMSE: 0.10778324331179852 MAPE: 459.9790072255086 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0011640203076264122 RMSE: 0.5284530873849588 NRMSE: 0.1415436152095778 MAPE: 140.42972129387252 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 3.709836590108702e-15 NRMSE: 9.435226201349734e-16 MAPE: 8.48705324402324e-12 Pearson Correlation: 0.22850751467185104 Spearman Correlation: 0.10430304617264555 Coefficient of Determination: -0.39343990312467736 RMSE: 0.6234447099717175 NRMSE: 0.1669866639806395 MAPE: 294.27519193832956 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.0502284275485064, tolerance: 0.009662504276089433 positive)
Pearson Correlation: 0.9999997493022544 Spearman Correlation: 0.999998073469326 Coefficient of Determination: 0.9999993933466862 RMSE: 0.0003300836392593002 NRMSE: 8.395016131114734e-05 MAPE: 0.8173080191968447 Pearson Correlation: 0.27076737604535167 Spearman Correlation: 0.2500205738226163 Coefficient of Determination: -0.231675448597074 RMSE: 0.5861408165630514 NRMSE: 0.15699499573136505 MAPE: 362.6202663593294 Predictor: RandomForests Pearson Correlation: 0.6893294529526489 Spearman Correlation: 0.6139315103305298 Coefficient of Determination: 0.40220749451032034 RMSE: 0.3276641630189653 NRMSE: 0.08333481599709182 MAPE: 747.3058989488107 Pearson Correlation: 0.5210045421947693 Spearman Correlation: 0.43369867454706423 Coefficient of Determination: 0.22370001606296497 RMSE: 0.4653380989820912 NRMSE: 0.12463856943406756 MAPE: 148.96775047854632 Protein: CTNNB1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.4291206958720877 RMSE: 0.9037435622191023 NRMSE: 0.1777623057079273 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5497170498826627 RMSE: 0.8436000623678614 NRMSE: 0.27017767234966206 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.7559807942775831 NRMSE: 0.14869803191927286 MAPE: 703.8692264199105 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.00011327914416048301 RMSE: 0.6776961126258592 NRMSE: 0.21704403121514582 MAPE: 269.8761709880999 Predictor: LinearRegression Pearson Correlation: 0.9999999999999999 Spearman Correlation: 0.9999999422040781 Coefficient of Determination: 1.0 RMSE: 5.1583309080680435e-15 NRMSE: 1.0146205562683014e-15 MAPE: 5.978867964335967e-12 Pearson Correlation: 0.30488739203196646 Spearman Correlation: 0.29917330640032924 Coefficient of Determination: -1.136955023220045 RMSE: 0.9906222730898716 NRMSE: 0.3172641063703994 MAPE: 452.59004810622025 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.11886474086413988, tolerance: 0.030747074518831245 positive)
Pearson Correlation: 0.9999998923264392 Spearman Correlation: 0.9999980927345244 Coefficient of Determination: 0.9999997460745914 RMSE: 0.0003809463723986995 NRMSE: 7.493044303672297e-05 MAPE: 0.23465888754312705 Pearson Correlation: 0.38675640699003905 Spearman Correlation: 0.3862167857454582 Coefficient of Determination: -0.3626034038104309 RMSE: 0.7910339667087667 NRMSE: 0.25334246097020763 MAPE: 334.8912326201204 Predictor: RandomForests Pearson Correlation: 0.6764497961042819 Spearman Correlation: 0.6757458925159587 Coefficient of Determination: 0.44154214348999743 RMSE: 0.5649447341089163 NRMSE: 0.11112209561544381 MAPE: 478.81157285097356 Pearson Correlation: 0.6554897774328055 Spearman Correlation: 0.6109926557687753 Coefficient of Determination: 0.4251964489217177 RMSE: 0.5137716295322111 NRMSE: 0.1645443488905009 MAPE: 188.18027267333912 Protein: CCNE1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -1.9790551557409413 RMSE: 0.7746141645114569 NRMSE: 0.27590887426944144 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.8285524646781477 RMSE: 0.8763813407881366 NRMSE: 0.2114972948785232 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.4487930906545114 NRMSE: 0.15985506345663808 MAPE: 112.14421009479175 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0040862214035515265 RMSE: 0.6494188844018614 NRMSE: 0.15672439713344627 MAPE: 115.49088793396595 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 3.410229161561937e-15 NRMSE: 1.214685364759372e-15 MAPE: 5.922802179253359e-13 Pearson Correlation: 0.5376964263945552 Spearman Correlation: 0.36845097819174805 Coefficient of Determination: 0.2691743965285164 RMSE: 0.5540465902629185 NRMSE: 0.13370818115764135 MAPE: 114.62646968322343 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.04287957503023642, tolerance: 0.010836139816194496 positive)
Pearson Correlation: 0.999999816213908 Spearman Correlation: 0.9999964166528094 Coefficient of Determination: 0.9999996093320465 RMSE: 0.0002805111030416609 NRMSE: 9.991490758385073e-05 MAPE: 0.05114660337557129 Pearson Correlation: 0.6252175838756052 Spearman Correlation: 0.47022282073342564 Coefficient of Determination: 0.35858093415221437 RMSE: 0.519051370417034 NRMSE: 0.1252627773287241 MAPE: 118.16882967431735 Predictor: RandomForests Pearson Correlation: 0.8687728710400541 Spearman Correlation: 0.7129356803074257 Coefficient of Determination: 0.7507582026026061 RMSE: 0.22405601084770027 NRMSE: 0.07980623716748006 MAPE: 52.65717275319447 Pearson Correlation: 0.7637582605397796 Spearman Correlation: 0.7318851797281416 Coefficient of Determination: 0.5529888997183832 RMSE: 0.43330985188758414 NRMSE: 0.10457075847372738 MAPE: 76.5298793004595 Protein: CCND1 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.5366759284640548 RMSE: 0.28216244755564185 NRMSE: 0.17771997351836757 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.30240520386774006 RMSE: 0.3149325402631455 NRMSE: 0.20120656537940065 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.2276187687222981 NRMSE: 0.14336564592505927 MAPE: 688.889848253646 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.0029528737155617435 RMSE: 0.2763660799096383 NRMSE: 0.17656692344184094 MAPE: 268.33908028480147 Predictor: LinearRegression Pearson Correlation: 0.9999999999999998 Spearman Correlation: 1.0 Coefficient of Determination: 1.0 RMSE: 2.2122981249541857e-15 NRMSE: 1.3934156284353181e-15 MAPE: 6.7110103293531e-12 Pearson Correlation: 0.07962282324685141 Spearman Correlation: 0.04285090836544097 Coefficient of Determination: -1.21127817009847 RMSE: 0.4103610799769631 NRMSE: 0.2621746974718973 MAPE: 612.7465290065212 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.02079628962658884, tolerance: 0.0027873943484564415 positive)
Pearson Correlation: 0.9999992934490188 Spearman Correlation: 0.9999948368977938 Coefficient of Determination: 0.9999982256352824 RMSE: 0.0003032002229646955 NRMSE: 0.0001909706130736014 MAPE: 0.9662920256210135 Pearson Correlation: 0.19009982441389947 Spearman Correlation: 0.1799798002468859 Coefficient of Determination: -0.46273993844272643 RMSE: 0.3337551951673812 NRMSE: 0.21323213041449843 MAPE: 556.9206089864041 Predictor: RandomForests Pearson Correlation: 0.6208734495060697 Spearman Correlation: 0.6239587824156606 Coefficient of Determination: 0.3199956930136776 RMSE: 0.18769983958713327 NRMSE: 0.11822271464472266 MAPE: 508.3454458854936 Pearson Correlation: 0.3506763727273697 Spearman Correlation: 0.2958116684746693 Coefficient of Determination: 0.11742231666701963 RMSE: 0.25925130173722083 NRMSE: 0.16563250005572433 MAPE: 253.5989973579388 Protein: ERBB2 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10085609607150081 RMSE: 1.0785113826338413 NRMSE: 0.1837421644434709 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05671362529003088 RMSE: 0.8919867459254164 NRMSE: 0.19736403273048267 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 1.0279203338681329 NRMSE: 0.17512314664601816 MAPE: 607.2333160123246 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.019061713383959455 RMSE: 0.875951357919715 NRMSE: 0.1938159880340115 MAPE: 565.705361200264 Predictor: LinearRegression Pearson Correlation: 1.0 Spearman Correlation: 0.9999999614693859 Coefficient of Determination: 1.0 RMSE: 5.088639425260646e-15 NRMSE: 8.669334762016195e-16 MAPE: 3.938689924511997e-12 Pearson Correlation: 0.5816272005120924 Spearman Correlation: 0.38367810072444797 Coefficient of Determination: -0.051472228157559696 RMSE: 0.8897718276594004 NRMSE: 0.19687395235300376 MAPE: 1207.8639702159574 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.14440786331346747, tolerance: 0.05684616744754108 positive)
Pearson Correlation: 0.999999952715802 Spearman Correlation: 0.9999982661223273 Coefficient of Determination: 0.9999999011895659 RMSE: 0.0003231177832296884 NRMSE: 5.5048432326982365e-05 MAPE: 0.5578043505092835 Pearson Correlation: 0.5836173893714828 Spearman Correlation: 0.42284068379904993 Coefficient of Determination: 0.1551903603681023 RMSE: 0.7975523112749264 NRMSE: 0.17646914731163324 MAPE: 808.3641080026808 Predictor: RandomForests Pearson Correlation: 0.8657910284985194 Spearman Correlation: 0.7138574800771907 Coefficient of Determination: 0.7412490306053332 RMSE: 0.5228780970156561 NRMSE: 0.08908088948594581 MAPE: 459.9438647830188 Pearson Correlation: 0.8115021185763847 Spearman Correlation: 0.6524651488075495 Coefficient of Determination: 0.6334670148362188 RMSE: 0.5253349313877418 NRMSE: 0.11623740046194088 MAPE: 196.29549005395032 Protein: ERBB3 x_train_column_count: 20441 Predictor: Zero Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.24617901957450639 RMSE: 0.5234556686317032 NRMSE: 0.14126566093685908 MAPE: 100.0 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.10551624527684367 RMSE: 0.43841640970600765 NRMSE: 0.21211918179733683 MAPE: 100.0 Predictor: Mean Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: 0.0 RMSE: 0.468910210523256 NRMSE: 0.12654540733652034 MAPE: 248.8019803066977 Pearson Correlation: nan Spearman Correlation: nan Coefficient of Determination: -0.05435310112335068 RMSE: 0.42815130952504166 NRMSE: 0.20715261438961974 MAPE: 239.7783255064313 Predictor: LinearRegression Pearson Correlation: 0.9999999999999997 Spearman Correlation: 0.9999997880816034 Coefficient of Determination: 1.0 RMSE: 6.805873361050028e-15 NRMSE: 1.836709880541477e-15 MAPE: 4.298531048261866e-12 Pearson Correlation: 0.2205361403368833 Spearman Correlation: 0.2536266038229903 Coefficient of Determination: -2.2243673823211867 RMSE: 0.7487321751416556 NRMSE: 0.3622593791206168 MAPE: 523.2125653225119 Predictor: ElasticNet
C:\Users\swath\Anaconda3\envs\thesis\lib\site-packages\sklearn\linear_model\coordinate_descent.py:475: ConvergenceWarning: Objective did not converge. You might want to increase the number of iterations. Duality gap: 0.06461695495576499, tolerance: 0.011829371061673479 positive)
Pearson Correlation: 0.9999997587428338 Spearman Correlation: 0.9999977844892781 Coefficient of Determination: 0.9999993767954726 RMSE: 0.0003701732137993795 NRMSE: 9.989912583272285e-05 MAPE: 0.21054629925354734 Pearson Correlation: 0.3626734603678593 Spearman Correlation: 0.35242584072120603 Coefficient of Determination: -0.6497936403441658 RMSE: 0.5355734620783346 NRMSE: 0.25912671618428834 MAPE: 289.80046247517555 Predictor: RandomForests Pearson Correlation: 0.6329913739745635 Spearman Correlation: 0.6291613577089233 Coefficient of Determination: 0.3135641673190068 RMSE: 0.3884987829640403 NRMSE: 0.10484467097670208 MAPE: 232.76281272778817 Pearson Correlation: 0.5348310508544339 Spearman Correlation: 0.5338295988728039 Coefficient of Determination: 0.22560575820839068 RMSE: 0.3669317518037358 NRMSE: 0.17753273199847872 MAPE: 225.93813015453802
Tabulate the scores
dataFrame = tabulate_scores(cumulative_scores, num_folds)
dataFrame = compute_improvements(dataFrame, Metric.Pearson.name, Metric.Spearman.name)
dataFrame.to_csv(results)
dataFrame
| MAPE | NRMSE | Pearson | R2 | RMSE | Spearman | Pearson Improvement | Spearman Improvement | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Protein | Regressor | Case | Normalization | Train/Test | ||||||||
| BRCA2 | ElasticNet | AllInteractionPartners_Mutations | MinMax | Train | 115.848 | 0.126893 | NaN | 0 | 0.19505 | NaN | NaN | NaN |
| Test | 114.802 | 0.178815 | NaN | -0.0238012 | 0.195262 | NaN | NaN | NaN | ||||
| TMM | Train | 146.043 | 0.1242 | 0.250707 | 0.0419929 | 0.190905 | 0.238545 | 0.247343 | 0.232042 | |||
| Test | 147.221 | 0.176415 | 0.186085 | 0.00409066 | 0.192576 | 0.166296 | NaN | NaN | ||||
| UN | Train | 262.614 | 0.0713742 | 0.826797 | 0.68353 | 0.109724 | 0.797338 | 0.799646 | 0.773399 | |||
| Test | 816.057 | 0.304103 | 0.0361582 | -1.93863 | 0.329181 | 0.0312923 | 0.118291 | 0.098963 | ||||
| ZScore | Train | 179.65 | 0.112723 | 0.499555 | 0.21053 | 0.173285 | 0.471608 | 0.472404 | 0.447669 | |||
| Test | 193.424 | 0.171475 | 0.293229 | 0.0577994 | 0.187172 | 0.295601 | 0.375362 | 0.363272 | ||||
| AllmRNA_Mutations | MinMax | Train | 115.848 | 0.126893 | NaN | 0 | 0.19505 | NaN | NaN | NaN | ||
| Test | 114.802 | 0.178815 | NaN | -0.0238012 | 0.195262 | NaN | NaN | NaN | ||||
| TMM | Train | 172.948 | 0.104937 | 0.647952 | 0.315522 | 0.161295 | 0.623829 | 0.644588 | 0.617327 | |||
| Test | 186.949 | 0.16915 | 0.325195 | 0.0822704 | 0.184641 | 0.317901 | NaN | NaN | ||||
| UN | Train | 0.827666 | 0.000198758 | 0.999999 | 0.999998 | 0.00030562 | 0.999994 | 0.972848 | 0.976055 | |||
| Test | 700.417 | 0.277937 | 0.119659 | -1.53424 | 0.303731 | 0.144999 | 0.201792 | 0.212670 | ||||
| ZScore | Train | 161.228 | 0.0758815 | 0.869144 | 0.642116 | 0.116634 | 0.821831 | 0.841993 | 0.797892 | |||
| Test | 249.139 | 0.174626 | 0.247359 | 0.0223157 | 0.190374 | 0.246261 | 0.329491 | 0.313932 | ||||
| NMostVariableGenes_Mutations | MinMax | Train | 115.848 | 0.126893 | NaN | 0 | 0.19505 | NaN | NaN | NaN | ||
| Test | 114.802 | 0.178815 | NaN | -0.0238012 | 0.195262 | NaN | NaN | NaN | ||||
| TMM | Train | 164.098 | 0.116122 | 0.468786 | 0.162286 | 0.178509 | 0.456587 | 0.465421 | 0.450085 | |||
| Test | 149.311 | 0.173714 | 0.240666 | 0.034466 | 0.189476 | 0.246508 | NaN | NaN | ||||
| UN | Train | 211.984 | 0.0670183 | 0.848599 | 0.720294 | 0.103057 | 0.825317 | 0.821448 | 0.801378 | |||
| Test | 1103.72 | 2.51635 | 0.0357564 | -1044.91 | 3.42305 | 0.075314 | 0.117889 | 0.142985 | ||||
| ZScore | Train | 117.601 | 0.111533 | 0.54392 | 0.227212 | 0.171398 | 0.395896 | 0.516769 | 0.371957 | |||
| Test | 126.526 | 0.180071 | 0.0114227 | -0.0417999 | 0.197126 | 0.0325132 | 0.093555 | 0.100184 | ||||
| NRandomGenes_Mutations | MinMax | Train | 115.848 | 0.126893 | NaN | 0 | 0.19505 | NaN | NaN | NaN | ||
| Test | 114.802 | 0.178815 | NaN | -0.0238012 | 0.195262 | NaN | NaN | NaN | ||||
| TMM | Train | 123.211 | 0.124241 | 0.272926 | 0.0413029 | 0.190978 | 0.263696 | 0.269562 | 0.257194 | |||
| Test | 124.659 | 0.177692 | 0.0921009 | -0.012705 | 0.19427 | 0.0978185 | NaN | NaN | ||||
| UN | Train | 206.906 | 0.0720237 | 0.823309 | 0.677437 | 0.110723 | 0.791052 | 0.796158 | 0.767113 | |||
| Test | 692.65 | 0.578263 | 0.112281 | -14.9666 | 0.607246 | 0.14575 | 0.194413 | 0.213420 | ||||
| ... | ... | ... | ... | ... | ... | ... | ... | ... | ... | ... | ... | ... |
| TP53 | Zero | selfmRNA | TMM | Train | 100 | 0.113902 | NaN | -0.0532417 | 0.458139 | NaN | NaN | NaN |
| Test | 100 | 0.149214 | NaN | -0.0578706 | 0.456486 | NaN | NaN | NaN | ||||
| UN | Train | 100 | 0.113902 | NaN | -0.0532417 | 0.458139 | NaN | NaN | NaN | |||
| Test | 100 | 0.149214 | NaN | -0.0578706 | 0.456486 | NaN | NaN | NaN | ||||
| ZScore | Train | 100 | 0.113902 | NaN | -0.0532417 | 0.458139 | NaN | NaN | NaN | |||
| Test | 100 | 0.149214 | NaN | -0.0578706 | 0.456486 | NaN | NaN | NaN | ||||
| selfmRNA_CNA_Mutations | MinMax | Train | 100 | 0.113902 | NaN | -0.0532417 | 0.458139 | NaN | NaN | NaN | ||
| Test | 100 | 0.149214 | NaN | -0.0578706 | 0.456486 | NaN | NaN | NaN | ||||
| TMM | Train | 100 | 0.113902 | NaN | -0.0532417 | 0.458139 | NaN | NaN | NaN | |||
| Test | 100 | 0.149214 | NaN | -0.0578706 | 0.456486 | NaN | NaN | NaN | ||||
| UN | Train | 100 | 0.113902 | NaN | -0.0532417 | 0.458139 | NaN | NaN | NaN | |||
| Test | 100 | 0.149214 | NaN | -0.0578706 | 0.456486 | NaN | NaN | NaN | ||||
| ZScore | Train | 100 | 0.113902 | NaN | -0.0532417 | 0.458139 | NaN | NaN | NaN | |||
| Test | 100 | 0.149214 | NaN | -0.0578706 | 0.456486 | NaN | NaN | NaN | ||||
| selfmRNA_Mutations | MinMax | Train | 100 | 0.113902 | NaN | -0.0532417 | 0.458139 | NaN | NaN | NaN | ||
| Test | 100 | 0.149214 | NaN | -0.0578706 | 0.456486 | NaN | NaN | NaN | ||||
| TMM | Train | 100 | 0.113902 | NaN | -0.0532417 | 0.458139 | NaN | NaN | NaN | |||
| Test | 100 | 0.149214 | NaN | -0.0578706 | 0.456486 | NaN | NaN | NaN | ||||
| UN | Train | 100 | 0.113902 | NaN | -0.0532417 | 0.458139 | NaN | NaN | NaN | |||
| Test | 100 | 0.149214 | NaN | -0.0578706 | 0.456486 | NaN | NaN | NaN | ||||
| ZScore | Train | 100 | 0.113902 | NaN | -0.0532417 | 0.458139 | NaN | NaN | NaN | |||
| Test | 100 | 0.149214 | NaN | -0.0578706 | 0.456486 | NaN | NaN | NaN | ||||
| selfmRNA_Polynomial | MinMax | Train | 100 | 0.113902 | NaN | -0.0532417 | 0.458139 | NaN | NaN | NaN | ||
| Test | 100 | 0.149214 | NaN | -0.0578706 | 0.456486 | NaN | NaN | NaN | ||||
| TMM | Train | 100 | 0.113902 | NaN | -0.0532417 | 0.458139 | NaN | NaN | NaN | |||
| Test | 100 | 0.149214 | NaN | -0.0578706 | 0.456486 | NaN | NaN | NaN | ||||
| UN | Train | 100 | 0.113902 | NaN | -0.0532417 | 0.458139 | NaN | NaN | NaN | |||
| Test | 100 | 0.149214 | NaN | -0.0578706 | 0.456486 | NaN | NaN | NaN | ||||
| ZScore | Train | 100 | 0.113902 | NaN | -0.0532417 | 0.458139 | NaN | NaN | NaN | |||
| Test | 100 | 0.149214 | NaN | -0.0578706 | 0.456486 | NaN | NaN | NaN |
5200 rows × 8 columns